locus-tag class description CDH84_RS00015 PF08544 GHMP kinases C terminal CDH84_RS00015 PF00288 GHMP kinases N terminal domain CDH84_RS00020 PF01047 MarR family CDH84_RS00025 PF00005 ABC transporter CDH84_RS00030 PF00950 ABC 3 transport family CDH84_RS00040 PF00579 tRNA synthetases class I (W and Y) CDH84_RS00040 PF01479 S4 domain CDH84_RS00045 PF00912 Transglycosylase CDH84_RS00045 PF00905 Penicillin binding protein transpeptidase domain CDH84_RS00050 PF00562 RNA polymerase Rpb2, domain 6 CDH84_RS00050 PF04560 RNA polymerase Rpb2, domain 7 CDH84_RS00050 PF10385 RNA polymerase beta subunit external 1 domain CDH84_RS00050 PF04565 RNA polymerase Rpb2, domain 3 CDH84_RS00050 PF04561 RNA polymerase Rpb2, domain 2 CDH84_RS00050 PF04563 RNA polymerase beta subunit CDH84_RS00055 PF04997 RNA polymerase Rpb1, domain 1 CDH84_RS00055 PF00623 RNA polymerase Rpb1, domain 2 CDH84_RS00055 PF04983 RNA polymerase Rpb1, domain 3 CDH84_RS00055 PF05000 RNA polymerase Rpb1, domain 4 CDH84_RS00055 PF04998 RNA polymerase Rpb1, domain 5 CDH84_RS00070 PF00437 Type II/IV secretion system protein CDH84_RS00075 PF00482 Type II secretion system (T2SS), protein F CDH84_RS00110 PF00871 Acetokinase family CDH84_RS00135 PF14748 Pyrroline-5-carboxylate reductase dimerisation CDH84_RS00135 PF03807 NADP oxidoreductase coenzyme F420-dependent CDH84_RS00140 PF05343 M42 glutamyl aminopeptidase CDH84_RS00155 PF00085 Thioredoxin CDH84_RS00160 PF01588 Putative tRNA binding domain CDH84_RS00160 PF14794 Domain of unknown function (DUF4479) CDH84_RS00170 PF00436 Single-strand binding protein family CDH84_RS00175 PF13419 Haloacid dehalogenase-like hydrolase CDH84_RS00180 PF06580 Histidine kinase CDH84_RS00180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDH84_RS00180 PF07694 5TMR of 5TMR-LYT CDH84_RS00185 PF04397 LytTr DNA-binding domain CDH84_RS00185 PF00072 Response regulator receiver domain CDH84_RS00190 PF03788 LrgA family CDH84_RS00195 PF04172 LrgB-like family CDH84_RS00205 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CDH84_RS00210 PF00528 Binding-protein-dependent transport system inner membrane component CDH84_RS00215 PF00528 Binding-protein-dependent transport system inner membrane component CDH84_RS00215 PF12911 N-terminal TM domain of oligopeptide transport permease C CDH84_RS00220 PF12558 ATP-binding cassette cobalt transporter CDH84_RS00220 PF00005 ABC transporter CDH84_RS00225 PF00005 ABC transporter CDH84_RS00230 PF02378 Phosphotransferase system, EIIC CDH84_RS00230 PF00367 phosphotransferase system, EIIB CDH84_RS00235 PF00128 Alpha amylase, catalytic domain CDH84_RS00235 PF16657 Maltogenic Amylase, C-terminal domain CDH84_RS00240 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CDH84_RS00245 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CDH84_RS00250 PF03611 PTS system sugar-specific permease component CDH84_RS00255 PF00456 Transketolase, thiamine diphosphate binding domain CDH84_RS00265 PF00970 Oxidoreductase FAD-binding domain CDH84_RS00265 PF00111 2Fe-2S iron-sulfur cluster binding domain CDH84_RS00265 PF00175 Oxidoreductase NAD-binding domain CDH84_RS00270 PF00312 Ribosomal protein S15 CDH84_RS00275 PF01138 3' exoribonuclease family, domain 1 CDH84_RS00275 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain CDH84_RS00275 PF00575 S1 RNA binding domain CDH84_RS00275 PF00013 KH domain CDH84_RS00275 PF03725 3' exoribonuclease family, domain 2 CDH84_RS00285 PF06426 Serine acetyltransferase, N-terminal CDH84_RS00285 PF00132 Bacterial transferase hexapeptide (six repeats) CDH84_RS00295 PF01406 tRNA synthetases class I (C) catalytic domain CDH84_RS00295 PF09190 DALR domain CDH84_RS00300 PF00636 Ribonuclease III domain CDH84_RS00305 PF08032 RNA 2'-O ribose methyltransferase substrate binding CDH84_RS00305 PF00588 SpoU rRNA Methylase family CDH84_RS00315 PF02645 Uncharacterised protein, DegV family COG1307 CDH84_RS00330 PF00572 Ribosomal protein L13 CDH84_RS00335 PF00380 Ribosomal protein S9/S16 CDH84_RS00345 PF02899 Phage integrase, N-terminal SAM-like domain CDH84_RS00345 PF00589 Phage integrase family CDH84_RS00380 PF02486 Replication initiation factor CDH84_RS00390 PF01076 Plasmid recombination enzyme CDH84_RS00410 PF06013 Proteins of 100 residues with WXG CDH84_RS00455 PF01381 Helix-turn-helix CDH84_RS00460 PF07690 Major Facilitator Superfamily CDH84_RS00465 PF00528 Binding-protein-dependent transport system inner membrane component CDH84_RS00470 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CDH84_RS00475 PF00528 Binding-protein-dependent transport system inner membrane component CDH84_RS00480 PF00571 CBS domain CDH84_RS00480 PF00005 ABC transporter CDH84_RS00610 PF00958 GMP synthase C terminal domain CDH84_RS00610 PF00117 Glutamine amidotransferase class-I CDH84_RS00610 PF13673 Acetyltransferase (GNAT) domain CDH84_RS00610 PF13302 Acetyltransferase (GNAT) domain CDH84_RS00610 PF03352 Methyladenine glycosylase CDH84_RS00625 PF04297 Putative helix-turn-helix protein, YlxM / p13 like CDH84_RS00635 PF00440 Bacterial regulatory proteins, tetR family CDH84_RS00645 PF00005 ABC transporter CDH84_RS00655 PF03551 Transcriptional regulator PadR-like family CDH84_RS00665 PF01979 Amidohydrolase family CDH84_RS00670 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family CDH84_RS00675 PF02091 Glycyl-tRNA synthetase alpha subunit CDH84_RS00680 PF02525 Flavodoxin-like fold CDH84_RS00685 PF05746 DALR anticodon binding domain CDH84_RS00685 PF02092 Glycyl-tRNA synthetase beta subunit CDH84_RS00690 PF05979 Bacterial protein of unknown function (DUF896) CDH84_RS00700 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CDH84_RS00700 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CDH84_RS00705 PF01266 FAD dependent oxidoreductase CDH84_RS00705 PF16901 C-terminal domain of alpha-glycerophosphate oxidase CDH84_RS00710 PF00230 Major intrinsic protein CDH84_RS00715 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CDH84_RS00715 PF07992 Pyridine nucleotide-disulphide oxidoreductase CDH84_RS00725 PF02779 Transketolase, pyrimidine binding domain CDH84_RS00725 PF02780 Transketolase, C-terminal domain CDH84_RS00725 PF00456 Transketolase, thiamine diphosphate binding domain CDH84_RS00735 PF00005 ABC transporter CDH84_RS00745 PF02378 Phosphotransferase system, EIIC CDH84_RS00745 PF00367 phosphotransferase system, EIIB CDH84_RS00745 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CDH84_RS00750 PF00696 Amino acid kinase family CDH84_RS00755 PF00171 Aldehyde dehydrogenase family CDH84_RS00760 PF01795 MraW methylase family CDH84_RS00770 PF00905 Penicillin binding protein transpeptidase domain CDH84_RS00770 PF03793 PASTA domain CDH84_RS00770 PF03717 Penicillin-binding Protein dimerisation domain CDH84_RS00775 PF00953 Glycosyl transferase family 4 CDH84_RS00775 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 CDH84_RS00780 PF00271 Helicase conserved C-terminal domain CDH84_RS00780 PF00270 DEAD/DEAH box helicase CDH84_RS00785 PF00497 Bacterial extracellular solute-binding proteins, family 3 CDH84_RS00790 PF00528 Binding-protein-dependent transport system inner membrane component CDH84_RS00795 PF00005 ABC transporter CDH84_RS00805 PF07992 Pyridine nucleotide-disulphide oxidoreductase CDH84_RS00810 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family CDH84_RS00810 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain CDH84_RS00810 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain CDH84_RS00815 PF02540 NAD synthase CDH84_RS00820 PF03051 Peptidase C1-like family CDH84_RS00825 PF00912 Transglycosylase CDH84_RS00825 PF00905 Penicillin binding protein transpeptidase domain CDH84_RS00830 PF03838 Recombination protein U CDH84_RS00835 PF06908 YspA SLOG family CDH84_RS00845 PF05103 DivIVA protein CDH84_RS00855 PF02926 THUMP domain CDH84_RS00855 PF01170 Putative RNA methylase family UPF0020 CDH84_RS00860 PF18708 MapZ extracellular C-terminal domain 2 CDH84_RS00860 PF18041 MapZ extracellular domain 1 CDH84_RS00865 PF02664 S-Ribosylhomocysteinase (LuxS) CDH84_RS00870 PF12072 Domain of unknown function (DUF3552) CDH84_RS00870 PF00013 KH domain CDH84_RS00870 PF01966 HD domain CDH84_RS00880 PF00005 ABC transporter CDH84_RS00890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDH84_RS00890 PF07730 Histidine kinase CDH84_RS00895 PF00072 Response regulator receiver domain CDH84_RS00895 PF00196 Bacterial regulatory proteins, luxR family CDH84_RS00900 PF06736 Protein of unknown function (DUF1211) CDH84_RS00905 PF00625 Guanylate kinase CDH84_RS00910 PF01192 RNA polymerase Rpb6 CDH84_RS00915 PF04851 Type III restriction enzyme, res subunit CDH84_RS00915 PF18319 PriA DNA helicase Cys-rich region (CRR) domain CDH84_RS00915 PF18074 Primosomal protein N C-terminal domain CDH84_RS00915 PF17764 3′ DNA-binding domain (3′BD) CDH84_RS00915 PF00271 Helicase conserved C-terminal domain CDH84_RS00920 PF02911 Formyl transferase, C-terminal domain CDH84_RS00920 PF00551 Formyl transferase CDH84_RS00925 PF01189 16S rRNA methyltransferase RsmB/F CDH84_RS00925 PF01029 NusB family CDH84_RS00935 PF00069 Protein kinase domain CDH84_RS00935 PF03793 PASTA domain CDH84_RS00945 PF00672 HAMP domain CDH84_RS00945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDH84_RS00945 PF07730 Histidine kinase CDH84_RS00950 PF00072 Response regulator receiver domain CDH84_RS00950 PF00196 Bacterial regulatory proteins, luxR family CDH84_RS00955 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CDH84_RS00960 PF00575 S1 RNA binding domain CDH84_RS00965 PF04055 Radical SAM superfamily CDH84_RS00970 PF08220 DeoR-like helix-turn-helix domain CDH84_RS00970 PF00455 DeoR C terminal sensor domain CDH84_RS00975 PF13936 Helix-turn-helix domain CDH84_RS00975 PF04198 Putative sugar-binding domain CDH84_RS00980 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit CDH84_RS00990 PF02378 Phosphotransferase system, EIIC CDH84_RS00995 PF02901 Pyruvate formate lyase-like CDH84_RS00995 PF01228 Glycine radical CDH84_RS01000 PF00923 Transaldolase/Fructose-6-phosphate aldolase CDH84_RS01005 PF00465 Iron-containing alcohol dehydrogenase CDH84_RS01010 PF00291 Pyridoxal-phosphate dependent enzyme CDH84_RS01015 PF01205 Uncharacterized protein family UPF0029 CDH84_RS01015 PF09186 Domain of unknown function (DUF1949) CDH84_RS01020 PF04851 Type III restriction enzyme, res subunit CDH84_RS01020 PF00271 Helicase conserved C-terminal domain CDH84_RS01030 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CDH84_RS01030 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus CDH84_RS01060 PF13840 ACT domain CDH84_RS01060 PF00696 Amino acid kinase family CDH84_RS01065 PF13419 Haloacid dehalogenase-like hydrolase CDH84_RS01075 PF00378 Enoyl-CoA hydratase/isomerase CDH84_RS01085 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CDH84_RS01085 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CDH84_RS01090 PF00550 Phosphopantetheine attachment site CDH84_RS01095 PF03060 Nitronate monooxygenase CDH84_RS01100 PF00698 Acyl transferase domain CDH84_RS01110 PF00109 Beta-ketoacyl synthase, N-terminal domain CDH84_RS01110 PF02801 Beta-ketoacyl synthase, C-terminal domain CDH84_RS01115 PF00364 Biotin-requiring enzyme CDH84_RS01120 PF07977 FabA-like domain CDH84_RS01125 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CDH84_RS01125 PF00289 Biotin carboxylase, N-terminal domain CDH84_RS01125 PF02785 Biotin carboxylase C-terminal domain CDH84_RS01130 PF17848 Acetyl-coA carboxylase zinc finger domain CDH84_RS01130 PF01039 Carboxyl transferase domain CDH84_RS01135 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit CDH84_RS01145 PF02403 Seryl-tRNA synthetase N-terminal domain CDH84_RS01145 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CDH84_RS01160 PF03613 PTS system mannose/fructose/sorbose family IID component CDH84_RS01165 PF03609 PTS system sorbose-specific iic component CDH84_RS01170 PF03610 PTS system fructose IIA component CDH84_RS01170 PF03830 PTS system sorbose subfamily IIB component CDH84_RS01195 PF00860 Permease family CDH84_RS01200 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE CDH84_RS01205 PF13302 Acetyltransferase (GNAT) domain CDH84_RS01210 PF03816 Cell envelope-related transcriptional attenuator domain CDH84_RS01220 PF01230 HIT domain CDH84_RS01235 PF00005 ABC transporter CDH84_RS01240 PF05975 Bacterial ABC transporter protein EcsB CDH84_RS01250 PF02390 Putative methyltransferase CDH84_RS01260 PF02576 RimP N-terminal domain CDH84_RS01260 PF17384 RimP C-terminal SH3 domain CDH84_RS01265 PF08529 NusA N-terminal domain CDH84_RS01265 PF00575 S1 RNA binding domain CDH84_RS01265 PF13184 NusA-like KH domain CDH84_RS01270 PF04296 Protein of unknown function (DUF448) CDH84_RS01275 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family CDH84_RS01280 PF11987 Translation-initiation factor 2 CDH84_RS01280 PF04760 Translation initiation factor IF-2, N-terminal region CDH84_RS01280 PF00009 Elongation factor Tu GTP binding domain CDH84_RS01285 PF02033 Ribosome-binding factor A CDH84_RS01290 PF07859 alpha/beta hydrolase fold CDH84_RS01295 PF03965 Penicillinase repressor CDH84_RS01300 PF00403 Heavy-metal-associated domain CDH84_RS01310 PF03458 UPF0126 domain CDH84_RS01320 PF01367 5'-3' exonuclease, C-terminal SAM fold CDH84_RS01320 PF00476 DNA polymerase family A CDH84_RS01320 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CDH84_RS01325 PF13380 CoA binding domain CDH84_RS01330 PF01475 Ferric uptake regulator family CDH84_RS01340 PF00486 Transcriptional regulatory protein, C terminal CDH84_RS01340 PF00072 Response regulator receiver domain CDH84_RS01345 PF00512 His Kinase A (phospho-acceptor) domain CDH84_RS01345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDH84_RS01355 PF01702 Queuine tRNA-ribosyltransferase CDH84_RS01365 PF02632 BioY family CDH84_RS01370 PF12706 Beta-lactamase superfamily domain CDH84_RS01375 PF14437 MafB19-like deaminase CDH84_RS01385 PF00342 Phosphoglucose isomerase CDH84_RS01390 PF01812 5-formyltetrahydrofolate cyclo-ligase family CDH84_RS01395 PF01694 Rhomboid family CDH84_RS01400 PF02608 ABC transporter substrate-binding protein PnrA-like CDH84_RS01405 PF00483 Nucleotidyl transferase CDH84_RS01410 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus CDH84_RS01410 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus CDH84_RS01415 PF00825 Ribonuclease P CDH84_RS01420 PF02096 60Kd inner membrane protein CDH84_RS01470 PF04167 Protein of unknown function (DUF402) CDH84_RS01475 PF02631 RecX family CDH84_RS01480 PF01938 TRAM domain CDH84_RS01480 PF05958 tRNA (Uracil-5-)-methyltransferase CDH84_RS01490 PF13673 Acetyltransferase (GNAT) domain CDH84_RS01500 PF00535 Glycosyl transferase family 2 CDH84_RS01500 PF01501 Glycosyl transferase family 8 CDH84_RS01505 PF00268 Ribonucleotide reductase, small chain CDH84_RS01510 PF07972 NrdI Flavodoxin like CDH84_RS01515 PF02867 Ribonucleotide reductase, barrel domain CDH84_RS01515 PF00317 Ribonucleotide reductase, all-alpha domain CDH84_RS01515 PF08343 Ribonucleotide reductase N-terminal CDH84_RS01545 PF02627 Carboxymuconolactone decarboxylase family CDH84_RS01555 PF13411 MerR HTH family regulatory protein CDH84_RS01565 PF00248 Aldo/keto reductase family CDH84_RS01570 PF01545 Cation efflux family CDH84_RS01580 PF12833 Helix-turn-helix domain CDH84_RS01585 PF00746 LPXTG cell wall anchor motif CDH84_RS01585 PF00746 LPXTG cell wall anchor motif CDH84_RS01585 PF08829 Alpha C protein N terminal CDH84_RS01585 PF04650 YSIRK type signal peptide CDH84_RS01585 PF08829 Alpha C protein N terminal CDH84_RS01585 PF17480 AlphaC C-terminal CDH84_RS01585 PF17480 AlphaC C-terminal CDH84_RS01585 PF04650 YSIRK type signal peptide CDH84_RS01610 PF13649 Methyltransferase domain CDH84_RS01620 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CDH84_RS01625 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CDH84_RS01630 PF03611 PTS system sugar-specific permease component CDH84_RS01635 PF00596 Class II Aldolase and Adducin N-terminal domain CDH84_RS01645 PF03611 PTS system sugar-specific permease component CDH84_RS01650 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CDH84_RS01655 PF02311 AraC-like ligand binding domain CDH84_RS01655 PF12833 Helix-turn-helix domain CDH84_RS01660 PF01547 Bacterial extracellular solute-binding protein CDH84_RS01665 PF00528 Binding-protein-dependent transport system inner membrane component CDH84_RS01670 PF00528 Binding-protein-dependent transport system inner membrane component CDH84_RS01675 PF16874 Glycosyl hydrolase family 36 C-terminal domain CDH84_RS01675 PF16875 Glycosyl hydrolase family 36 N-terminal domain CDH84_RS01685 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain CDH84_RS01685 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain CDH84_RS01690 PF16363 GDP-mannose 4,6 dehydratase CDH84_RS01695 PF01263 Aldose 1-epimerase CDH84_RS01720 PF10458 Valyl tRNA synthetase tRNA binding arm CDH84_RS01720 PF00133 tRNA synthetases class I (I, L, M and V) CDH84_RS01720 PF08264 Anticodon-binding domain of tRNA CDH84_RS01765 PF01867 CRISPR associated protein Cas1 CDH84_RS01770 PF09827 CRISPR associated protein Cas2 CDH84_RS01775 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CDH84_RS01775 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CDH84_RS01785 PF04237 YjbR CDH84_RS01790 PF03590 Aspartate-ammonia ligase CDH84_RS01810 PF01467 Cytidylyltransferase-like CDH84_RS01815 PF05362 Lon protease (S16) C-terminal proteolytic domain CDH84_RS01815 PF13180 PDZ domain CDH84_RS01820 PF02872 5'-nucleotidase, C-terminal domain CDH84_RS01825 PF06265 Protein of unknown function (DUF1027) CDH84_RS01830 PF04055 Radical SAM superfamily CDH84_RS01840 PF00005 ABC transporter CDH84_RS01840 PF00664 ABC transporter transmembrane region CDH84_RS01845 PF00664 ABC transporter transmembrane region CDH84_RS01845 PF00005 ABC transporter CDH84_RS01850 PF00117 Glutamine amidotransferase class-I CDH84_RS01855 PF02632 BioY family CDH84_RS01860 PF04055 Radical SAM superfamily CDH84_RS01860 PF06968 Biotin and Thiamin Synthesis associated domain CDH84_RS01870 PF02803 Thiolase, C-terminal domain CDH84_RS01870 PF00108 Thiolase, N-terminal domain CDH84_RS01880 PF00730 HhH-GPD superfamily base excision DNA repair protein CDH84_RS01880 PF10576 Iron-sulfur binding domain of endonuclease III CDH84_RS01880 PF00633 Helix-hairpin-helix motif CDH84_RS01895 PF00480 ROK family CDH84_RS01900 PF00581 Rhodanese-like domain CDH84_RS01905 PF03144 Elongation factor Tu domain 2 CDH84_RS01905 PF00679 Elongation factor G C-terminus CDH84_RS01905 PF14492 Elongation Factor G, domain II CDH84_RS01905 PF00009 Elongation factor Tu GTP binding domain CDH84_RS01915 PF02875 Mur ligase family, glutamate ligase domain CDH84_RS01915 PF08245 Mur ligase middle domain CDH84_RS01920 PF04101 Glycosyltransferase family 28 C-terminal domain CDH84_RS01920 PF03033 Glycosyltransferase family 28 N-terminal domain CDH84_RS01925 PF08478 POTRA domain, FtsQ-type CDH84_RS01930 PF02491 SHS2 domain inserted in FTSA CDH84_RS01930 PF11983 Membrane-attachment and polymerisation-promoting switch CDH84_RS01935 PF00091 Tubulin/FtsZ family, GTPase domain CDH84_RS01935 PF12327 FtsZ family, C-terminal domain CDH84_RS01940 PF01168 Alanine racemase, N-terminal domain CDH84_RS01945 PF04472 Cell division protein SepF CDH84_RS01950 PF02325 YGGT family CDH84_RS01955 PF01479 S4 domain CDH84_RS01955 PF17774 Putative RNA-binding domain in YlmH CDH84_RS01960 PF05103 DivIVA protein CDH84_RS01965 PF08264 Anticodon-binding domain of tRNA CDH84_RS01965 PF00133 tRNA synthetases class I (I, L, M and V) CDH84_RS01975 PF00293 NUDIX domain CDH84_RS01980 PF17871 AAA lid domain CDH84_RS01980 PF10431 C-terminal, D2-small domain, of ClpB protein CDH84_RS01980 PF07724 AAA domain (Cdc48 subfamily) CDH84_RS01980 PF00004 ATPase family associated with various cellular activities (AAA) CDH84_RS01990 PF08796 Protein of unknown function (DUF1797) CDH84_RS01995 PF00528 Binding-protein-dependent transport system inner membrane component CDH84_RS02000 PF00005 ABC transporter CDH84_RS02005 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CDH84_RS02005 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CDH84_RS02005 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CDH84_RS02005 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CDH84_RS02010 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CDH84_RS02010 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CDH84_RS02015 PF01256 Carbohydrate kinase CDH84_RS02020 PF13742 OB-fold nucleic acid binding domain CDH84_RS02020 PF02601 Exonuclease VII, large subunit CDH84_RS02025 PF02609 Exonuclease VII small subunit CDH84_RS02030 PF00348 Polyprenyl synthetase CDH84_RS02035 PF01479 S4 domain CDH84_RS02035 PF01728 FtsJ-like methyltransferase CDH84_RS02040 PF01316 Arginine repressor, DNA binding domain CDH84_RS02040 PF02863 Arginine repressor, C-terminal domain CDH84_RS02045 PF13476 AAA domain CDH84_RS02050 PF02645 Uncharacterised protein, DegV family COG1307 CDH84_RS02055 PF13472 GDSL-like Lipase/Acylhydrolase family CDH84_RS02065 PF00216 Bacterial DNA-binding protein CDH84_RS02075 PF01180 Dihydroorotate dehydrogenase CDH84_RS02085 PF02388 FemAB family CDH84_RS02090 PF02388 FemAB family CDH84_RS02100 PF01966 HD domain CDH84_RS02110 PF00690 Cation transporter/ATPase, N-terminus CDH84_RS02110 PF00689 Cation transporting ATPase, C-terminus CDH84_RS02120 PF06874 Firmicute fructose-1,6-bisphosphatase CDH84_RS02125 PF08331 Domain of unknown function (DUF1730) CDH84_RS02135 PF00005 ABC transporter CDH84_RS02140 PF02687 FtsX-like permease family CDH84_RS02140 PF18075 FtsX extracellular domain CDH84_RS02150 PF00753 Metallo-beta-lactamase superfamily CDH84_RS02165 PF00155 Aminotransferase class I and II CDH84_RS02170 PF00152 tRNA synthetases class II (D, K and N) CDH84_RS02170 PF01336 OB-fold nucleic acid binding domain CDH84_RS02180 PF01156 Inosine-uridine preferring nucleoside hydrolase CDH84_RS02195 PF03668 P-loop ATPase protein family CDH84_RS02200 PF01933 Uncharacterised protein family UPF0052 CDH84_RS02205 PF02650 WhiA C-terminal HTH domain CDH84_RS02205 PF14527 WhiA LAGLIDADG-like domain CDH84_RS02205 PF10298 WhiA N-terminal LAGLIDADG-like domain CDH84_RS02210 PF03577 Peptidase family C69 CDH84_RS02215 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment CDH84_RS02215 PF01297 Zinc-uptake complex component A periplasmic CDH84_RS02220 PF01197 Ribosomal protein L31 CDH84_RS02225 PF01368 DHH family CDH84_RS02225 PF02272 DHHA1 domain CDH84_RS02230 PF00962 Adenosine/AMP deaminase CDH84_RS02235 PF00258 Flavodoxin CDH84_RS02240 PF01817 Chorismate mutase type II CDH84_RS02240 PF00793 DAHP synthetase I family CDH84_RS02245 PF00654 Voltage gated chloride channel CDH84_RS02250 PF01245 Ribosomal protein L19 CDH84_RS02300 PF00005 ABC transporter CDH84_RS02310 PF00072 Response regulator receiver domain CDH84_RS02310 PF00486 Transcriptional regulatory protein, C terminal CDH84_RS02315 PF00512 His Kinase A (phospho-acceptor) domain CDH84_RS02315 PF00672 HAMP domain CDH84_RS02315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDH84_RS02325 PF05532 CsbD-like CDH84_RS02335 PF01098 Cell cycle protein CDH84_RS02345 PF00986 DNA gyrase B subunit, carboxyl terminus CDH84_RS02345 PF00204 DNA gyrase B CDH84_RS02345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDH84_RS02345 PF01751 Toprim domain CDH84_RS02350 PF06160 Septation ring formation regulator, EzrA CDH84_RS02380 PF00113 Enolase, C-terminal TIM barrel domain CDH84_RS02380 PF03952 Enolase, N-terminal domain CDH84_RS02390 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CDH84_RS02395 PF01202 Shikimate kinase CDH84_RS02400 PF03816 Cell envelope-related transcriptional attenuator domain CDH84_RS02405 PF05958 tRNA (Uracil-5-)-methyltransferase CDH84_RS02415 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) CDH84_RS02430 PF17480 AlphaC C-terminal CDH84_RS02430 PF04650 YSIRK type signal peptide CDH84_RS02430 PF00746 LPXTG cell wall anchor motif CDH84_RS02430 PF08829 Alpha C protein N terminal CDH84_RS02520 PF00144 Beta-lactamase CDH84_RS02530 PF00005 ABC transporter CDH84_RS02565 PF00550 Phosphopantetheine attachment site CDH84_RS02570 PF07977 FabA-like domain CDH84_RS02575 PF00005 ABC transporter CDH84_RS02590 PF01571 Aminomethyltransferase folate-binding domain CDH84_RS02590 PF08669 Glycine cleavage T-protein C-terminal barrel domain CDH84_RS02595 PF00109 Beta-ketoacyl synthase, N-terminal domain CDH84_RS02595 PF02801 Beta-ketoacyl synthase, C-terminal domain CDH84_RS02615 PF17998 Cell surface antigen I/II C2 terminal domain CDH84_RS02615 PF08363 Glucan-binding protein C CDH84_RS02615 PF06696 Streptococcal surface antigen repeat CDH84_RS02615 PF16364 Cell surface antigen C-terminus CDH84_RS02615 PF00746 LPXTG cell wall anchor motif CDH84_RS02615 PF18652 Adhesin P1 N-terminal domain CDH84_RS02620 PF02225 PA domain CDH84_RS02620 PF00082 Subtilase family CDH84_RS02620 PF06280 Fn3-like domain CDH84_RS02620 PF00746 LPXTG cell wall anchor motif CDH84_RS02630 PF01431 Peptidase family M13 CDH84_RS02630 PF05649 Peptidase family M13 CDH84_RS02685 PF00005 ABC transporter CDH84_RS02695 PF01223 DNA/RNA non-specific endonuclease CDH84_RS02700 PF09335 SNARE associated Golgi protein CDH84_RS02705 PF00005 ABC transporter CDH84_RS02710 PF03649 Uncharacterised protein family (UPF0014) CDH84_RS02720 PF03466 LysR substrate binding domain CDH84_RS02720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDH84_RS02730 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CDH84_RS02730 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CDH84_RS02740 PF00294 pfkB family carbohydrate kinase CDH84_RS02745 PF00703 Glycosyl hydrolases family 2 CDH84_RS02745 PF02837 Glycosyl hydrolases family 2, sugar binding domain CDH84_RS02745 PF02836 Glycosyl hydrolases family 2, TIM barrel domain CDH84_RS02750 PF07729 FCD domain CDH84_RS02750 PF00392 Bacterial regulatory proteins, gntR family CDH84_RS02760 PF01081 KDPG and KHG aldolase CDH84_RS02765 PF02614 Glucuronate isomerase CDH84_RS02770 PF03786 D-mannonate dehydratase (UxuA) CDH84_RS02775 PF00106 short chain dehydrogenase CDH84_RS02785 PF00933 Glycosyl hydrolase family 3 N terminal domain CDH84_RS02790 PF00557 Metallopeptidase family M24 CDH84_RS02790 PF01321 Creatinase/Prolidase N-terminal domain CDH84_RS02795 PF00356 Bacterial regulatory proteins, lacI family CDH84_RS02800 PF00128 Alpha amylase, catalytic domain CDH84_RS02800 PF09154 Domain of unknown function (DUF1939) CDH84_RS02805 PF00534 Glycosyl transferases group 1 CDH84_RS02805 PF13439 Glycosyltransferase Family 4 CDH84_RS02810 PF13439 Glycosyltransferase Family 4 CDH84_RS02810 PF00534 Glycosyl transferases group 1 CDH84_RS02815 PF03129 Anticodon binding domain CDH84_RS02815 PF02824 TGS domain CDH84_RS02815 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CDH84_RS02815 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CDH84_RS02820 PF00072 Response regulator receiver domain CDH84_RS02820 PF00486 Transcriptional regulatory protein, C terminal CDH84_RS02830 PF03413 Peptidase propeptide and YPEB domain CDH84_RS02835 PF00528 Binding-protein-dependent transport system inner membrane component CDH84_RS02840 PF00528 Binding-protein-dependent transport system inner membrane component CDH84_RS02845 PF00497 Bacterial extracellular solute-binding proteins, family 3 CDH84_RS02850 PF00005 ABC transporter CDH84_RS02855 PF00072 Response regulator receiver domain CDH84_RS02855 PF00486 Transcriptional regulatory protein, C terminal CDH84_RS02860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDH84_RS02860 PF00512 His Kinase A (phospho-acceptor) domain CDH84_RS02860 PF13426 PAS domain CDH84_RS02860 PF00672 HAMP domain CDH84_RS02865 PF00753 Metallo-beta-lactamase superfamily CDH84_RS02870 PF04304 Protein of unknown function (DUF454) CDH84_RS02875 PF00035 Double-stranded RNA binding motif CDH84_RS02875 PF14622 Ribonuclease-III-like CDH84_RS02880 PF06470 SMC proteins Flexible Hinge Domain CDH84_RS02880 PF02463 RecF/RecN/SMC N terminal domain CDH84_RS02895 PF02881 SRP54-type protein, helical bundle domain CDH84_RS02895 PF00448 SRP54-type protein, GTPase domain CDH84_RS02900 PF09323 Domain of unknown function (DUF1980) CDH84_RS02905 PF03773 Predicted permease CDH84_RS02920 PF16921 Tex protein YqgF-like domain CDH84_RS02920 PF09371 Tex-like protein N-terminal domain CDH84_RS02920 PF00575 S1 RNA binding domain CDH84_RS02920 PF17674 HHH domain CDH84_RS02925 PF10263 SprT-like family CDH84_RS02930 PF04024 PspC domain CDH84_RS02940 PF02603 HPr Serine kinase N terminus CDH84_RS02940 PF07475 HPr Serine kinase C-terminal domain CDH84_RS02945 PF01790 Prolipoprotein diacylglyceryl transferase CDH84_RS02955 PF12732 YtxH-like protein CDH84_RS02970 PF01136 Peptidase family U32 CDH84_RS02970 PF16325 Peptidase family U32 C-terminal domain CDH84_RS02975 PF02229 Transcriptional Coactivator p15 (PC4) CDH84_RS02985 PF01566 Natural resistance-associated macrophage protein CDH84_RS02990 PF01872 RibD C-terminal domain CDH84_RS02990 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CDH84_RS02995 PF00677 Lumazine binding domain CDH84_RS03000 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CDH84_RS03000 PF00925 GTP cyclohydrolase II CDH84_RS03005 PF00885 6,7-dimethyl-8-ribityllumazine synthase CDH84_RS03010 PF01336 OB-fold nucleic acid binding domain CDH84_RS03010 PF00152 tRNA synthetases class II (D, K and N) CDH84_RS03025 PF04073 Aminoacyl-tRNA editing domain CDH84_RS03030 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family CDH84_RS03050 PF01432 Peptidase family M3 CDH84_RS03050 PF08439 Oligopeptidase F CDH84_RS03055 PF00311 Phosphoenolpyruvate carboxylase CDH84_RS03060 PF13808 DDE_Tnp_1-associated CDH84_RS03060 PF01609 Transposase DDE domain CDH84_RS03065 PF01098 Cell cycle protein CDH84_RS03070 PF03143 Elongation factor Tu C-terminal domain CDH84_RS03070 PF03144 Elongation factor Tu domain 2 CDH84_RS03070 PF00009 Elongation factor Tu GTP binding domain CDH84_RS03075 PF00121 Triosephosphate isomerase CDH84_RS03080 PF00300 Histidine phosphatase superfamily (branch 1) CDH84_RS03085 PF03717 Penicillin-binding Protein dimerisation domain CDH84_RS03085 PF00905 Penicillin binding protein transpeptidase domain CDH84_RS03090 PF13662 Toprim domain CDH84_RS03090 PF02132 RecR protein CDH84_RS03095 PF07478 D-ala D-ala ligase C-terminus CDH84_RS03095 PF01820 D-ala D-ala ligase N-terminus CDH84_RS03100 PF08245 Mur ligase middle domain CDH84_RS03100 PF02875 Mur ligase family, glutamate ligase domain CDH84_RS03100 PF01225 Mur ligase family, catalytic domain CDH84_RS03105 PF07690 Major Facilitator Superfamily CDH84_RS03120 PF16658 Class II release factor RF3, C-terminal domain CDH84_RS03120 PF03144 Elongation factor Tu domain 2 CDH84_RS03120 PF00009 Elongation factor Tu GTP binding domain CDH84_RS03125 PF08000 Bacterial PH domain CDH84_RS03130 PF00005 ABC transporter CDH84_RS03130 PF09383 NIL domain CDH84_RS03135 PF00528 Binding-protein-dependent transport system inner membrane component CDH84_RS03140 PF03180 NLPA lipoprotein CDH84_RS03145 PF00270 DEAD/DEAH box helicase CDH84_RS03145 PF00271 Helicase conserved C-terminal domain CDH84_RS03150 PF01541 GIY-YIG catalytic domain CDH84_RS03155 PF05175 Methyltransferase small domain CDH84_RS03160 PF01553 Acyltransferase CDH84_RS03165 PF10531 SLBB domain CDH84_RS03170 PF13567 Domain of unknown function (DUF4131) CDH84_RS03170 PF03772 Competence protein CDH84_RS03170 PF00753 Metallo-beta-lactamase superfamily CDH84_RS03180 PF00356 Bacterial regulatory proteins, lacI family CDH84_RS03180 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CDH84_RS03185 PF00934 PE family CDH84_RS03185 PF07859 alpha/beta hydrolase fold CDH84_RS03190 PF01209 ubiE/COQ5 methyltransferase family CDH84_RS03200 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CDH84_RS03200 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CDH84_RS03205 PF01609 Transposase DDE domain CDH84_RS03205 PF13808 DDE_Tnp_1-associated CDH84_RS03210 PF00874 PRD domain CDH84_RS03210 PF03123 CAT RNA binding domain CDH84_RS03215 PF00367 phosphotransferase system, EIIB CDH84_RS03215 PF02378 Phosphotransferase system, EIIC CDH84_RS03215 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CDH84_RS03220 PF00232 Glycosyl hydrolase family 1 CDH84_RS03225 PF13556 PucR C-terminal helix-turn-helix domain CDH84_RS03225 PF05651 Putative sugar diacid recognition CDH84_RS03225 PF17853 GGDEF-like domain CDH84_RS03230 PF02595 Glycerate kinase family CDH84_RS03235 PF02447 GntP family permease CDH84_RS03245 PF01047 MarR family CDH84_RS03250 PF02547 Queuosine biosynthesis protein CDH84_RS03260 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase CDH84_RS03265 PF13409 Glutathione S-transferase, N-terminal domain CDH84_RS03270 PF00849 RNA pseudouridylate synthase CDH84_RS03270 PF01479 S4 domain CDH84_RS03295 PF13808 DDE_Tnp_1-associated CDH84_RS03295 PF01609 Transposase DDE domain CDH84_RS03305 PF01432 Peptidase family M3 CDH84_RS03305 PF08439 Oligopeptidase F CDH84_RS03315 PF01596 O-methyltransferase CDH84_RS03320 PF13145 PPIC-type PPIASE domain CDH84_RS03325 PF04525 LURP-one-related CDH84_RS03330 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CDH84_RS03330 PF02272 DHHA1 domain CDH84_RS03330 PF01411 tRNA synthetases class II (A) CDH84_RS03340 PF08437 Glycosyl transferase family 8 C-terminal CDH84_RS03340 PF01501 Glycosyl transferase family 8 CDH84_RS03350 PF01381 Helix-turn-helix CDH84_RS03360 PF09515 Thiamine transporter protein (Thia_YuaJ) CDH84_RS03365 PF00268 Ribonucleotide reductase, small chain CDH84_RS03370 PF02867 Ribonucleotide reductase, barrel domain CDH84_RS03370 PF08343 Ribonucleotide reductase N-terminal CDH84_RS03370 PF00317 Ribonucleotide reductase, all-alpha domain CDH84_RS03375 PF00462 Glutaredoxin CDH84_RS03380 PF00381 PTS HPr component phosphorylation site CDH84_RS03385 PF00391 PEP-utilising enzyme, mobile domain CDH84_RS03385 PF02896 PEP-utilising enzyme, TIM barrel domain CDH84_RS03385 PF05524 PEP-utilising enzyme, N-terminal CDH84_RS03390 PF00171 Aldehyde dehydrogenase family CDH84_RS03395 PF01522 Polysaccharide deacetylase CDH84_RS03395 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain CDH84_RS03400 PF00271 Helicase conserved C-terminal domain CDH84_RS03400 PF00270 DEAD/DEAH box helicase CDH84_RS03405 PF00485 Phosphoribulokinase / Uridine kinase family CDH84_RS03410 PF13185 GAF domain CDH84_RS03415 PF12169 DNA polymerase III subunits gamma and tau domain III CDH84_RS03425 PF02237 Biotin protein ligase C terminal domain CDH84_RS03425 PF03099 Biotin/lipoate A/B protein ligase family CDH84_RS03425 PF08279 HTH domain CDH84_RS03430 PF02772 S-adenosylmethionine synthetase, central domain CDH84_RS03430 PF02773 S-adenosylmethionine synthetase, C-terminal domain CDH84_RS03430 PF00438 S-adenosylmethionine synthetase, N-terminal domain CDH84_RS03455 PF09819 ABC-type cobalt transport system, permease component CDH84_RS03460 PF00005 ABC transporter CDH84_RS03470 PF03070 TENA/THI-4/PQQC family CDH84_RS03475 PF08543 Phosphomethylpyrimidine kinase CDH84_RS03480 PF02110 Hydroxyethylthiazole kinase family CDH84_RS03485 PF02581 Thiamine monophosphate synthase CDH84_RS03490 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CDH84_RS03500 PF00571 CBS domain CDH84_RS03500 PF03061 Thioesterase superfamily CDH84_RS03500 PF07085 DRTGG domain CDH84_RS03500 PF00392 Bacterial regulatory proteins, gntR family CDH84_RS03505 PF00557 Metallopeptidase family M24 CDH84_RS03515 PF04138 GtrA-like protein CDH84_RS03520 PF06177 QueT transporter CDH84_RS03525 PF12826 Helix-hairpin-helix motif CDH84_RS03525 PF03119 NAD-dependent DNA ligase C4 zinc finger domain CDH84_RS03525 PF03120 NAD-dependent DNA ligase OB-fold domain CDH84_RS03525 PF00533 BRCA1 C Terminus (BRCT) domain CDH84_RS03525 PF01653 NAD-dependent DNA ligase adenylation domain CDH84_RS03530 PF00781 Diacylglycerol kinase catalytic domain CDH84_RS03535 PF00128 Alpha amylase, catalytic domain CDH84_RS03535 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CDH84_RS03535 PF17999 Pullulanase N1-terminal domain CDH84_RS03540 PF00128 Alpha amylase, catalytic domain CDH84_RS03540 PF02806 Alpha amylase, C-terminal all-beta domain CDH84_RS03540 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CDH84_RS03545 PF00483 Nucleotidyl transferase CDH84_RS03545 PF00132 Bacterial transferase hexapeptide (six repeats) CDH84_RS03550 PF00483 Nucleotidyl transferase CDH84_RS03555 PF08323 Starch synthase catalytic domain CDH84_RS03555 PF00534 Glycosyl transferases group 1 CDH84_RS03560 PF00137 ATP synthase subunit C CDH84_RS03565 PF00119 ATP synthase A chain CDH84_RS03570 PF00430 ATP synthase B/B' CF(0) CDH84_RS03575 PF00213 ATP synthase delta (OSCP) subunit CDH84_RS03580 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CDH84_RS03580 PF00306 ATP synthase alpha/beta chain, C terminal domain CDH84_RS03580 PF02874 ATP synthase alpha/beta family, beta-barrel domain CDH84_RS03585 PF00231 ATP synthase CDH84_RS03590 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CDH84_RS03590 PF02874 ATP synthase alpha/beta family, beta-barrel domain CDH84_RS03595 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain CDH84_RS03595 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain CDH84_RS03605 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CDH84_RS03615 PF01223 DNA/RNA non-specific endonuclease CDH84_RS03620 PF01409 tRNA synthetases class II core domain (F) CDH84_RS03620 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain CDH84_RS03625 PF13673 Acetyltransferase (GNAT) domain CDH84_RS03630 PF03484 tRNA synthetase B5 domain CDH84_RS03630 PF03483 B3/4 domain CDH84_RS03630 PF01588 Putative tRNA binding domain CDH84_RS03630 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain CDH84_RS03630 PF03147 Ferredoxin-fold anticodon binding domain CDH84_RS03635 PF04228 Putative neutral zinc metallopeptidase CDH84_RS03640 PF12705 PD-(D/E)XK nuclease superfamily CDH84_RS03645 PF12705 PD-(D/E)XK nuclease superfamily CDH84_RS03645 PF13361 UvrD-like helicase C-terminal domain CDH84_RS03645 PF00580 UvrD/REP helicase N-terminal domain CDH84_RS03655 PF10396 GTP-binding protein TrmE N-terminus CDH84_RS03655 PF01926 50S ribosome-binding GTPase CDH84_RS03655 PF12631 MnmE helical domain CDH84_RS03660 PF12848 ABC transporter CDH84_RS03660 PF16326 ABC transporter C-terminal domain CDH84_RS03660 PF00005 ABC transporter CDH84_RS03665 PF00676 Dehydrogenase E1 component CDH84_RS03670 PF02779 Transketolase, pyrimidine binding domain CDH84_RS03670 PF00364 Biotin-requiring enzyme CDH84_RS03670 PF02780 Transketolase, C-terminal domain CDH84_RS03675 PF02817 e3 binding domain CDH84_RS03675 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CDH84_RS03675 PF00364 Biotin-requiring enzyme CDH84_RS03680 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CDH84_RS03680 PF07992 Pyridine nucleotide-disulphide oxidoreductase CDH84_RS03685 PF10437 Bacterial lipoate protein ligase C-terminus CDH84_RS03685 PF03099 Biotin/lipoate A/B protein ligase family CDH84_RS03690 PF07685 CobB/CobQ-like glutamine amidotransferase domain CDH84_RS03695 PF08353 Domain of unknown function (DUF1727) CDH84_RS03695 PF08245 Mur ligase middle domain CDH84_RS03700 PF02457 DisA bacterial checkpoint controller nucleotide-binding CDH84_RS03710 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CDH84_RS03710 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CDH84_RS03710 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CDH84_RS03710 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CDH84_RS03725 PF06969 HemN C-terminal domain CDH84_RS03725 PF04055 Radical SAM superfamily CDH84_RS03735 PF13344 Haloacid dehalogenase-like hydrolase CDH84_RS03745 PF16592 REC lobe of CRISPR-associated endonuclease Cas9 CDH84_RS03745 PF16593 Bridge helix of CRISPR-associated endonuclease Cas9 CDH84_RS03745 PF16595 PAM-interacting domain of CRISPR-associated endonuclease Cas9 CDH84_RS03745 PF13395 HNH endonuclease CDH84_RS03750 PF01867 CRISPR associated protein Cas1 CDH84_RS03755 PF09827 CRISPR associated protein Cas2 CDH84_RS03760 PF09711 CRISPR-associated protein (Cas_Csn2) CDH84_RS03770 PF00334 Nucleoside diphosphate kinase CDH84_RS03775 PF06421 GTP-binding protein LepA C-terminus CDH84_RS03775 PF00679 Elongation factor G C-terminus CDH84_RS03775 PF00009 Elongation factor Tu GTP binding domain CDH84_RS03775 PF03144 Elongation factor Tu domain 2 CDH84_RS03785 PF01966 HD domain CDH84_RS03790 PF13673 Acetyltransferase (GNAT) domain CDH84_RS03795 PF01641 SelR domain CDH84_RS03800 PF00689 Cation transporting ATPase, C-terminus CDH84_RS03800 PF00690 Cation transporter/ATPase, N-terminus CDH84_RS03810 PF00132 Bacterial transferase hexapeptide (six repeats) CDH84_RS03830 PF00005 ABC transporter CDH84_RS03835 PF00392 Bacterial regulatory proteins, gntR family CDH84_RS03840 PF01336 OB-fold nucleic acid binding domain CDH84_RS03840 PF07733 Bacterial DNA polymerase III alpha NTPase domain CDH84_RS03840 PF14579 Helix-hairpin-helix motif CDH84_RS03840 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CDH84_RS03840 PF02811 PHP domain CDH84_RS03845 PF00365 Phosphofructokinase CDH84_RS03850 PF00224 Pyruvate kinase, barrel domain CDH84_RS03850 PF02887 Pyruvate kinase, alpha/beta domain CDH84_RS03855 PF01609 Transposase DDE domain CDH84_RS03855 PF13808 DDE_Tnp_1-associated CDH84_RS03860 PF10502 Signal peptidase, peptidase S26 CDH84_RS03870 PF01380 SIS domain CDH84_RS03875 PF03831 PhnA domain CDH84_RS03875 PF08274 PhnA Zinc-Ribbon CDH84_RS03880 PF00528 Binding-protein-dependent transport system inner membrane component CDH84_RS03885 PF00005 ABC transporter CDH84_RS03895 PF01649 Ribosomal protein S20 CDH84_RS03900 PF00485 Phosphoribulokinase / Uridine kinase family CDH84_RS03905 PF05175 Methyltransferase small domain CDH84_RS03910 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CDH84_RS03915 PF02608 ABC transporter substrate-binding protein PnrA-like CDH84_RS03920 PF00005 ABC transporter CDH84_RS03925 PF02653 Branched-chain amino acid transport system / permease component CDH84_RS03930 PF02653 Branched-chain amino acid transport system / permease component CDH84_RS03935 PF07992 Pyridine nucleotide-disulphide oxidoreductase CDH84_RS03935 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CDH84_RS03940 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CDH84_RS03940 PF00056 lactate/malate dehydrogenase, NAD binding domain CDH84_RS03945 PF00521 DNA gyrase/topoisomerase IV, subunit A CDH84_RS03945 PF03989 DNA gyrase C-terminal domain, beta-propeller CDH84_RS03950 PF04203 Sortase domain CDH84_RS03955 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CDH84_RS03965 PF00999 Sodium/hydrogen exchanger family CDH84_RS03975 PF02540 NAD synthase CDH84_RS03975 PF00958 GMP synthase C terminal domain CDH84_RS03975 PF00117 Glutamine amidotransferase class-I CDH84_RS03980 PF00392 Bacterial regulatory proteins, gntR family CDH84_RS03980 PF07702 UTRA domain CDH84_RS03985 PF01134 Glucose inhibited division protein A CDH84_RS03995 PF03180 NLPA lipoprotein CDH84_RS04005 PF03572 Peptidase family S41 CDH84_RS04010 PF00005 ABC transporter CDH84_RS04020 PF00072 Response regulator receiver domain CDH84_RS04020 PF00486 Transcriptional regulatory protein, C terminal CDH84_RS04025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDH84_RS04030 PF00589 Phage integrase family CDH84_RS04030 PF13495 Phage integrase, N-terminal SAM-like domain CDH84_RS04035 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CDH84_RS04050 PF00448 SRP54-type protein, GTPase domain CDH84_RS04050 PF02881 SRP54-type protein, helical bundle domain CDH84_RS04050 PF02978 Signal peptide binding domain CDH84_RS04055 PF04297 Putative helix-turn-helix protein, YlxM / p13 like CDH84_RS04060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDH84_RS04060 PF00512 His Kinase A (phospho-acceptor) domain CDH84_RS04065 PF00072 Response regulator receiver domain CDH84_RS04065 PF00486 Transcriptional regulatory protein, C terminal CDH84_RS04070 PF01433 Peptidase family M1 domain CDH84_RS04070 PF11838 ERAP1-like C-terminal domain CDH84_RS04075 PF01895 PhoU domain CDH84_RS04080 PF00005 ABC transporter CDH84_RS04085 PF00005 ABC transporter CDH84_RS04090 PF00528 Binding-protein-dependent transport system inner membrane component CDH84_RS04095 PF00528 Binding-protein-dependent transport system inner membrane component CDH84_RS04100 PF12849 PBP superfamily domain CDH84_RS04105 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF CDH84_RS04105 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF CDH84_RS04105 PF01189 16S rRNA methyltransferase RsmB/F CDH84_RS04110 PF00459 Inositol monophosphatase family CDH84_RS04115 PF05256 Uncharacterised protein family (UPF0223) CDH84_RS04120 PF03960 ArsC family CDH84_RS04125 PF06574 FAD synthetase CDH84_RS04125 PF01687 Riboflavin kinase CDH84_RS04130 PF01509 TruB family pseudouridylate synthase (N terminal domain) CDH84_RS04130 PF16198 tRNA pseudouridylate synthase B C-terminal domain CDH84_RS04160 PF00005 ABC transporter CDH84_RS04165 PF01751 Toprim domain CDH84_RS04165 PF01396 Topoisomerase DNA binding C4 zinc finger CDH84_RS04165 PF01131 DNA topoisomerase CDH84_RS04170 PF18255 DNA processing protein A sterile alpha motif domain CDH84_RS04170 PF02481 DNA recombination-mediator protein A CDH84_RS04175 PF01497 Periplasmic binding protein CDH84_RS04180 PF00005 ABC transporter CDH84_RS04185 PF01032 FecCD transport family CDH84_RS04190 PF01032 FecCD transport family CDH84_RS04195 PF14602 Hexapeptide repeat of succinyl-transferase CDH84_RS04195 PF12464 Maltose acetyltransferase CDH84_RS04200 PF01351 Ribonuclease HII CDH84_RS04205 PF01926 50S ribosome-binding GTPase CDH84_RS04210 PF03734 L,D-transpeptidase catalytic domain CDH84_RS04215 PF02554 Carbon starvation protein CstA CDH84_RS04220 PF04397 LytTr DNA-binding domain CDH84_RS04220 PF00072 Response regulator receiver domain CDH84_RS04225 PF06580 Histidine kinase CDH84_RS04225 PF07694 5TMR of 5TMR-LYT CDH84_RS04225 PF13492 GAF domain CDH84_RS04225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDH84_RS04270 PF12538 DNA transporter CDH84_RS04270 PF01580 FtsK/SpoIIIE family CDH84_RS04280 PF10140 WXG100 protein secretion system (Wss), protein YukC CDH84_RS04300 PF06013 Proteins of 100 residues with WXG CDH84_RS04305 PF06013 Proteins of 100 residues with WXG CDH84_RS04320 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CDH84_RS04320 PF02142 MGS-like domain CDH84_RS04320 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CDH84_RS04325 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain CDH84_RS04325 PF00117 Glutamine amidotransferase class-I CDH84_RS04330 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CDH84_RS04330 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CDH84_RS04335 PF01979 Amidohydrolase family CDH84_RS04340 PF00156 Phosphoribosyl transferase domain CDH84_RS04345 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CDH84_RS04355 PF00005 ABC transporter CDH84_RS04355 PF12848 ABC transporter CDH84_RS04365 PF01118 Semialdehyde dehydrogenase, NAD binding domain CDH84_RS04365 PF02774 Semialdehyde dehydrogenase, dimerisation domain CDH84_RS04380 PF13091 PLD-like domain CDH84_RS04385 PF01268 Formate--tetrahydrofolate ligase CDH84_RS04390 PF10437 Bacterial lipoate protein ligase C-terminus CDH84_RS04390 PF03099 Biotin/lipoate A/B protein ligase family CDH84_RS04400 PF01661 Macro domain CDH84_RS04405 PF01597 Glycine cleavage H-protein CDH84_RS04415 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CDH84_RS04420 PF03099 Biotin/lipoate A/B protein ligase family CDH84_RS04430 PF02441 Flavoprotein CDH84_RS04435 PF12822 ECF transporter, substrate-specific component CDH84_RS04440 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CDH84_RS04440 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CDH84_RS04440 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CDH84_RS04440 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CDH84_RS04450 PF00664 ABC transporter transmembrane region CDH84_RS04450 PF00005 ABC transporter CDH84_RS04455 PF00005 ABC transporter CDH84_RS04455 PF00664 ABC transporter transmembrane region CDH84_RS04470 PF00464 Serine hydroxymethyltransferase CDH84_RS04475 PF01300 Telomere recombination CDH84_RS04480 PF05175 Methyltransferase small domain CDH84_RS04485 PF03462 PCRF domain CDH84_RS04485 PF00472 RF-1 domain CDH84_RS04490 PF00265 Thymidine kinase CDH84_RS04495 PF01361 Tautomerase enzyme CDH84_RS04505 PF02424 ApbE family CDH84_RS04510 PF04205 FMN-binding domain CDH84_RS04510 PF03358 NADPH-dependent FMN reductase CDH84_RS04510 PF00890 FAD binding domain CDH84_RS04515 PF03358 NADPH-dependent FMN reductase CDH84_RS04515 PF00890 FAD binding domain CDH84_RS04515 PF04205 FMN-binding domain CDH84_RS04525 PF00860 Permease family CDH84_RS04530 PF00156 Phosphoribosyl transferase domain CDH84_RS04535 PF00478 IMP dehydrogenase / GMP reductase domain CDH84_RS04540 PF07690 Major Facilitator Superfamily CDH84_RS04550 PF02705 K+ potassium transporter CDH84_RS04555 PF00106 short chain dehydrogenase CDH84_RS04560 PF01515 Phosphate acetyl/butaryl transferase CDH84_RS04565 PF00849 RNA pseudouridylate synthase CDH84_RS04575 PF04607 Region found in RelA / SpoT proteins CDH84_RS04585 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CDH84_RS04585 PF14572 Phosphoribosyl synthetase-associated domain CDH84_RS04590 PF00266 Aminotransferase class-V CDH84_RS04600 PF06971 Putative DNA-binding protein N-terminus CDH84_RS04600 PF02629 CoA binding domain CDH84_RS04605 PF04002 RadC-like JAB domain CDH84_RS04610 PF01594 AI-2E family transporter CDH84_RS04615 PF00232 Glycosyl hydrolase family 1 CDH84_RS04635 PF12833 Helix-turn-helix domain CDH84_RS04635 PF12852 Cupin CDH84_RS04640 PF00654 Voltage gated chloride channel CDH84_RS04645 PF13416 Bacterial extracellular solute-binding protein CDH84_RS04650 PF00528 Binding-protein-dependent transport system inner membrane component CDH84_RS04655 PF00528 Binding-protein-dependent transport system inner membrane component CDH84_RS04660 PF00005 ABC transporter CDH84_RS04660 PF08402 TOBE domain CDH84_RS04665 PF01565 FAD binding domain CDH84_RS04665 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain CDH84_RS04670 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) CDH84_RS04675 PF02152 Dihydroneopterin aldolase CDH84_RS04680 PF00809 Pterin binding enzyme CDH84_RS04685 PF01227 GTP cyclohydrolase I CDH84_RS04690 PF02875 Mur ligase family, glutamate ligase domain CDH84_RS04690 PF08245 Mur ligase middle domain CDH84_RS04695 PF00892 EamA-like transporter family CDH84_RS04700 PF08544 GHMP kinases C terminal CDH84_RS04700 PF00288 GHMP kinases N terminal domain CDH84_RS04705 PF03447 Homoserine dehydrogenase, NAD binding domain CDH84_RS04705 PF00742 Homoserine dehydrogenase CDH84_RS04710 PF01522 Polysaccharide deacetylase CDH84_RS04725 PF00171 Aldehyde dehydrogenase family CDH84_RS04730 PF03601 Conserved hypothetical protein 698 CDH84_RS04755 PF08534 Redoxin CDH84_RS04775 PF03780 Asp23 family, cell envelope-related function CDH84_RS04780 PF05532 CsbD-like CDH84_RS04785 PF03780 Asp23 family, cell envelope-related function CDH84_RS04800 PF04226 Transglycosylase associated protein CDH84_RS04810 PF00580 UvrD/REP helicase N-terminal domain CDH84_RS04810 PF13361 UvrD-like helicase C-terminal domain CDH84_RS04820 PF00860 Permease family CDH84_RS04825 PF01235 Sodium:alanine symporter family CDH84_RS04830 PF16916 Dimerisation domain of Zinc Transporter CDH84_RS04830 PF01545 Cation efflux family CDH84_RS04835 PF03788 LrgA family CDH84_RS04840 PF04172 LrgB-like family CDH84_RS04875 PF02899 Phage integrase, N-terminal SAM-like domain CDH84_RS04875 PF00589 Phage integrase family CDH84_RS04885 PF00575 S1 RNA binding domain CDH84_RS04905 PF01063 Amino-transferase class IV CDH84_RS04910 PF03989 DNA gyrase C-terminal domain, beta-propeller CDH84_RS04910 PF00521 DNA gyrase/topoisomerase IV, subunit A CDH84_RS04915 PF01751 Toprim domain CDH84_RS04915 PF00986 DNA gyrase B subunit, carboxyl terminus CDH84_RS04915 PF00204 DNA gyrase B CDH84_RS04915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDH84_RS04920 PF02660 Glycerol-3-phosphate acyltransferase CDH84_RS04925 PF03167 Uracil DNA glycosylase superfamily CDH84_RS04935 PF02348 Cytidylyltransferase CDH84_RS04935 PF13472 GDSL-like Lipase/Acylhydrolase family CDH84_RS04945 PF02350 UDP-N-acetylglucosamine 2-epimerase CDH84_RS04950 PF08666 SAF domain CDH84_RS04950 PF03102 NeuB family CDH84_RS04955 PF01943 Polysaccharide biosynthesis protein CDH84_RS04975 PF01501 Glycosyl transferase family 8 CDH84_RS04975 PF00535 Glycosyl transferase family 2 CDH84_RS04980 PF00535 Glycosyl transferase family 2 CDH84_RS04980 PF01501 Glycosyl transferase family 8 CDH84_RS04990 PF04101 Glycosyltransferase family 28 C-terminal domain CDH84_RS04990 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase CDH84_RS04995 PF03033 Glycosyltransferase family 28 N-terminal domain CDH84_RS04995 PF04101 Glycosyltransferase family 28 C-terminal domain CDH84_RS05000 PF02397 Bacterial sugar transferase CDH84_RS05005 PF13614 AAA domain CDH84_RS05010 PF02706 Chain length determinant protein CDH84_RS05020 PF03816 Cell envelope-related transcriptional attenuator domain CDH84_RS05025 PF03466 LysR substrate binding domain CDH84_RS05025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDH84_RS05035 PF01048 Phosphorylase superfamily CDH84_RS05040 PF00654 Voltage gated chloride channel CDH84_RS05045 PF01048 Phosphorylase superfamily CDH84_RS05050 PF03960 ArsC family CDH84_RS05055 PF01676 Metalloenzyme superfamily CDH84_RS05060 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) CDH84_RS05070 PF00756 Putative esterase CDH84_RS05075 PF00753 Metallo-beta-lactamase superfamily CDH84_RS05075 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain CDH84_RS05075 PF17770 Ribonuclease J C-terminal domain CDH84_RS05080 PF00005 ABC transporter CDH84_RS05080 PF08402 TOBE domain CDH84_RS05095 PF05670 NFACT protein RNA binding domain CDH84_RS05100 PF03306 Alpha-acetolactate decarboxylase CDH84_RS05105 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CDH84_RS05105 PF00205 Thiamine pyrophosphate enzyme, central domain CDH84_RS05105 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CDH84_RS05115 PF01594 AI-2E family transporter CDH84_RS05125 PF00293 NUDIX domain CDH84_RS05130 PF08124 Polysaccharide lyase family 8, N terminal alpha-helical domain CDH84_RS05130 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain CDH84_RS05130 PF02278 Polysaccharide lyase family 8, super-sandwich domain CDH84_RS05135 PF16363 GDP-mannose 4,6 dehydratase CDH84_RS05140 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase CDH84_RS05145 PF00483 Nucleotidyl transferase CDH84_RS05150 PF01266 FAD dependent oxidoreductase CDH84_RS05155 PF01784 NIF3 (NGG1p interacting factor 3) CDH84_RS05160 PF04816 tRNA (adenine(22)-N(1))-methyltransferase CDH84_RS05170 PF00156 Phosphoribosyl transferase domain CDH84_RS05185 PF02272 DHHA1 domain CDH84_RS05185 PF01368 DHH family CDH84_RS05185 PF10141 Single-strand DNA-specific exonuclease, C terminal domain CDH84_RS05185 PF17768 RecJ OB domain CDH84_RS05190 PF00106 short chain dehydrogenase CDH84_RS05195 PF12706 Beta-lactamase superfamily domain CDH84_RS05195 PF00753 Metallo-beta-lactamase superfamily CDH84_RS05205 PF16360 GTP-binding GTPase Middle Region CDH84_RS05205 PF13167 GTP-binding GTPase N-terminal CDH84_RS05205 PF01926 50S ribosome-binding GTPase CDH84_RS05225 PF17967 Pullulanase N2 domain CDH84_RS05225 PF03714 Bacterial pullanase-associated domain CDH84_RS05225 PF11852 Domain of unknown function (DUF3372) CDH84_RS05225 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CDH84_RS05225 PF18494 Pullulanase Ins domain CDH84_RS05235 PF03167 Uracil DNA glycosylase superfamily CDH84_RS05240 PF01546 Peptidase family M20/M25/M40 CDH84_RS05245 PF00881 Nitroreductase family CDH84_RS05250 PF03009 Glycerophosphoryl diester phosphodiesterase family CDH84_RS05255 PF02151 UvrB/uvrC motif CDH84_RS05255 PF01541 GIY-YIG catalytic domain CDH84_RS05255 PF08459 UvrC Helix-hairpin-helix N-terminal CDH84_RS05260 PF02677 Epoxyqueuosine reductase QueH CDH84_RS05265 PF01554 MatE CDH84_RS05305 PF01297 Zinc-uptake complex component A periplasmic CDH84_RS05310 PF13808 DDE_Tnp_1-associated CDH84_RS05310 PF01609 Transposase DDE domain CDH84_RS05315 PF06280 Fn3-like domain CDH84_RS05315 PF02225 PA domain CDH84_RS05315 PF00082 Subtilase family CDH84_RS05330 PF07733 Bacterial DNA polymerase III alpha NTPase domain CDH84_RS05330 PF00929 Exonuclease CDH84_RS05330 PF02811 PHP domain CDH84_RS05330 PF11490 DNA polymerase III polC-type N-terminus II CDH84_RS05330 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CDH84_RS05330 PF14579 Helix-hairpin-helix motif CDH84_RS05335 PF02920 DNA binding domain of tn916 integrase CDH84_RS05335 PF00589 Phage integrase family CDH84_RS05340 PF09035 Excisionase from transposon Tn916 CDH84_RS05375 PF00679 Elongation factor G C-terminus CDH84_RS05375 PF14492 Elongation Factor G, domain II CDH84_RS05375 PF03764 Elongation factor G, domain IV CDH84_RS05375 PF00009 Elongation factor Tu GTP binding domain CDH84_RS05390 PF00877 NlpC/P60 family CDH84_RS05420 PF18106 Rolling Circle replication initiation protein N-terminal domain CDH84_RS05420 PF02486 Replication initiation factor CDH84_RS05455 PF00589 Phage integrase family CDH84_RS05455 PF13495 Phage integrase, N-terminal SAM-like domain CDH84_RS05510 PF00542 Ribosomal protein L7/L12 C-terminal domain CDH84_RS05510 PF16320 Ribosomal protein L7/L12 dimerisation domain CDH84_RS05515 PF00466 Ribosomal protein L10 CDH84_RS05520 PF07724 AAA domain (Cdc48 subfamily) CDH84_RS05520 PF10431 C-terminal, D2-small domain, of ClpB protein CDH84_RS05520 PF00004 ATPase family associated with various cellular activities (AAA) CDH84_RS05520 PF17871 AAA lid domain CDH84_RS05560 PF01926 50S ribosome-binding GTPase CDH84_RS05565 PF07724 AAA domain (Cdc48 subfamily) CDH84_RS05565 PF10431 C-terminal, D2-small domain, of ClpB protein CDH84_RS05565 PF06689 ClpX C4-type zinc finger CDH84_RS05575 PF00186 Dihydrofolate reductase CDH84_RS05580 PF00303 Thymidylate synthase CDH84_RS05585 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal CDH84_RS05585 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal CDH84_RS05590 PF00368 Hydroxymethylglutaryl-coenzyme A reductase CDH84_RS05600 PF03006 Haemolysin-III related CDH84_RS05605 PF00781 Diacylglycerol kinase catalytic domain CDH84_RS05620 PF01070 FMN-dependent dehydrogenase CDH84_RS05625 PF00288 GHMP kinases N terminal domain CDH84_RS05625 PF08544 GHMP kinases C terminal CDH84_RS05635 PF10509 Galactokinase galactose-binding signature CDH84_RS05635 PF08544 GHMP kinases C terminal CDH84_RS05635 PF00288 GHMP kinases N terminal domain CDH84_RS05640 PF00512 His Kinase A (phospho-acceptor) domain CDH84_RS05640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDH84_RS05645 PF00486 Transcriptional regulatory protein, C terminal CDH84_RS05645 PF00072 Response regulator receiver domain CDH84_RS05650 PF04607 Region found in RelA / SpoT proteins CDH84_RS05655 PF00005 ABC transporter CDH84_RS05655 PF00664 ABC transporter transmembrane region CDH84_RS05660 PF00005 ABC transporter CDH84_RS05660 PF00664 ABC transporter transmembrane region CDH84_RS05670 PF00149 Calcineurin-like phosphoesterase CDH84_RS05670 PF17936 Bacterial Ig domain CDH84_RS05670 PF02872 5'-nucleotidase, C-terminal domain CDH84_RS05675 PF01327 Polypeptide deformylase CDH84_RS05680 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CDH84_RS05680 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CDH84_RS05690 PF00005 ABC transporter CDH84_RS05690 PF00664 ABC transporter transmembrane region CDH84_RS05695 PF00664 ABC transporter transmembrane region CDH84_RS05695 PF00005 ABC transporter CDH84_RS05705 PF00005 ABC transporter CDH84_RS05705 PF12848 ABC transporter CDH84_RS05705 PF16326 ABC transporter C-terminal domain CDH84_RS05710 PF13735 tRNA nucleotidyltransferase domain 2 putative CDH84_RS05710 PF12627 Probable RNA and SrmB- binding site of polymerase A CDH84_RS05710 PF01743 Poly A polymerase head domain CDH84_RS05715 PF02645 Uncharacterised protein, DegV family COG1307 CDH84_RS05735 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CDH84_RS05735 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CDH84_RS05740 PF00294 pfkB family carbohydrate kinase CDH84_RS05745 PF00455 DeoR C terminal sensor domain CDH84_RS05745 PF08220 DeoR-like helix-turn-helix domain CDH84_RS05750 PF01476 LysM domain CDH84_RS05750 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase CDH84_RS05760 PF02558 Ketopantoate reductase PanE/ApbA CDH84_RS05760 PF08546 Ketopantoate reductase PanE/ApbA C terminal CDH84_RS05770 PF07992 Pyridine nucleotide-disulphide oxidoreductase CDH84_RS05775 PF01746 tRNA (Guanine-1)-methyltransferase CDH84_RS05780 PF01782 RimM N-terminal domain CDH84_RS05780 PF05239 PRC-barrel domain CDH84_RS05805 PF00886 Ribosomal protein S16 CDH84_RS05810 PF02687 FtsX-like permease family CDH84_RS05810 PF12704 MacB-like periplasmic core domain CDH84_RS05815 PF00005 ABC transporter CDH84_RS05820 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CDH84_RS05825 PF02142 MGS-like domain CDH84_RS05825 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CDH84_RS05825 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CDH84_RS05830 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain CDH84_RS05830 PF00117 Glutamine amidotransferase class-I CDH84_RS05835 PF00156 Phosphoribosyl transferase domain CDH84_RS05840 PF00849 RNA pseudouridylate synthase CDH84_RS05840 PF01479 S4 domain CDH84_RS05845 PF01252 Signal peptidase (SPase) II CDH84_RS05850 PF03466 LysR substrate binding domain CDH84_RS05850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDH84_RS05855 PF01016 Ribosomal L27 protein CDH84_RS05865 PF00829 Ribosomal prokaryotic L21 protein CDH84_RS05875 PF02568 Thiamine biosynthesis protein (ThiI) CDH84_RS05875 PF02926 THUMP domain CDH84_RS05880 PF00266 Aminotransferase class-V CDH84_RS05890 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CDH84_RS05890 PF07992 Pyridine nucleotide-disulphide oxidoreductase CDH84_RS05895 PF06133 Control of competence regulator ComK, YlbF/YmcA CDH84_RS05900 PF01264 Chorismate synthase CDH84_RS05905 PF01761 3-dehydroquinate synthase CDH84_RS05910 PF01487 Type I 3-dehydroquinase CDH84_RS05915 PF10672 S-adenosylmethionine-dependent methyltransferase CDH84_RS05915 PF17785 PUA-like domain CDH84_RS05920 PF00884 Sulfatase CDH84_RS05925 PF00453 Ribosomal protein L20 CDH84_RS05930 PF01632 Ribosomal protein L35 CDH84_RS05935 PF05198 Translation initiation factor IF-3, N-terminal domain CDH84_RS05935 PF00707 Translation initiation factor IF-3, C-terminal domain CDH84_RS05940 PF02224 Cytidylate kinase CDH84_RS05960 PF01546 Peptidase family M20/M25/M40 CDH84_RS05960 PF07687 Peptidase dimerisation domain CDH84_RS05965 PF14667 Polysaccharide biosynthesis C-terminal domain CDH84_RS05965 PF01943 Polysaccharide biosynthesis protein CDH84_RS05970 PF08245 Mur ligase middle domain CDH84_RS05970 PF02875 Mur ligase family, glutamate ligase domain CDH84_RS05975 PF00005 ABC transporter CDH84_RS05980 PF01497 Periplasmic binding protein CDH84_RS05985 PF01032 FecCD transport family CDH84_RS05990 PF01032 FecCD transport family CDH84_RS06000 PF02833 DHHA2 domain CDH84_RS06000 PF01368 DHH family CDH84_RS06005 PF04055 Radical SAM superfamily CDH84_RS06010 PF03471 Transporter associated domain CDH84_RS06010 PF01595 Cyclin M transmembrane N-terminal domain CDH84_RS06010 PF00571 CBS domain CDH84_RS06015 PF06962 Putative rRNA methylase CDH84_RS06020 PF04055 Radical SAM superfamily CDH84_RS06020 PF16199 Radical_SAM C-terminal domain CDH84_RS06025 PF01569 PAP2 superfamily CDH84_RS06030 PF12822 ECF transporter, substrate-specific component CDH84_RS06065 PF00534 Glycosyl transferases group 1 CDH84_RS06065 PF08323 Starch synthase catalytic domain CDH84_RS06070 PF00535 Glycosyl transferase family 2 CDH84_RS06075 PF01943 Polysaccharide biosynthesis protein CDH84_RS06075 PF14667 Polysaccharide biosynthesis C-terminal domain CDH84_RS06090 PF00535 Glycosyl transferase family 2 CDH84_RS06090 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 CDH84_RS06100 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CDH84_RS06105 PF04991 LicD family CDH84_RS06120 PF00535 Glycosyl transferase family 2 CDH84_RS06125 PF00535 Glycosyl transferase family 2 CDH84_RS06135 PF04321 RmlD substrate binding domain CDH84_RS06140 PF01883 Iron-sulfur cluster assembly protein CDH84_RS06145 PF04542 Sigma-70 region 2 CDH84_RS06145 PF00140 Sigma-70 factor, region 1.2 CDH84_RS06145 PF04539 Sigma-70 region 3 CDH84_RS06145 PF04545 Sigma-70, region 4 CDH84_RS06145 PF03979 Sigma-70 factor, region 1.1 CDH84_RS06150 PF01807 CHC2 zinc finger CDH84_RS06150 PF08275 DNA primase catalytic core, N-terminal domain CDH84_RS06150 PF10410 DnaB-helicase binding domain of primase CDH84_RS06155 PF01741 Large-conductance mechanosensitive channel, MscL CDH84_RS06160 PF01165 Ribosomal protein S21 CDH84_RS06170 PF00497 Bacterial extracellular solute-binding proteins, family 3 CDH84_RS06175 PF00909 Ammonium Transporter Family CDH84_RS06185 PF17773 UPF0176 acylphosphatase like domain CDH84_RS06185 PF00581 Rhodanese-like domain CDH84_RS06185 PF12368 Rhodanase C-terminal CDH84_RS06195 PF07690 Major Facilitator Superfamily CDH84_RS06205 PF00343 Carbohydrate phosphorylase CDH84_RS06210 PF02446 4-alpha-glucanotransferase CDH84_RS06215 PF00356 Bacterial regulatory proteins, lacI family CDH84_RS06215 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CDH84_RS06225 PF00528 Binding-protein-dependent transport system inner membrane component CDH84_RS06230 PF00528 Binding-protein-dependent transport system inner membrane component CDH84_RS06235 PF00854 POT family CDH84_RS06255 PF00534 Glycosyl transferases group 1 CDH84_RS06260 PF01043 SecA preprotein cross-linking domain CDH84_RS06260 PF07516 SecA Wing and Scaffold domain CDH84_RS06260 PF07517 SecA DEAD-like domain CDH84_RS06270 PF16929 Accessory Sec system GspB-transporter CDH84_RS06275 PF16993 Accessory Sec system protein Asp1 CDH84_RS06280 PF00344 SecY translocase CDH84_RS06285 PF08759 Glycosyltransferase GT-D fold CDH84_RS06285 PF01501 Glycosyl transferase family 8 CDH84_RS06290 PF01501 Glycosyl transferase family 8 CDH84_RS06290 PF00535 Glycosyl transferase family 2 CDH84_RS06295 PF01501 Glycosyl transferase family 8 CDH84_RS06295 PF08759 Glycosyltransferase GT-D fold CDH84_RS06300 PF01501 Glycosyl transferase family 8 CDH84_RS06300 PF00535 Glycosyl transferase family 2 CDH84_RS06305 PF08759 Glycosyltransferase GT-D fold CDH84_RS06305 PF01501 Glycosyl transferase family 8 CDH84_RS06340 PF12344 Ultra-violet resistance protein B CDH84_RS06340 PF02151 UvrB/uvrC motif CDH84_RS06340 PF04851 Type III restriction enzyme, res subunit CDH84_RS06340 PF00271 Helicase conserved C-terminal domain CDH84_RS06340 PF17757 UvrB interaction domain CDH84_RS06350 PF00528 Binding-protein-dependent transport system inner membrane component CDH84_RS06355 PF00005 ABC transporter CDH84_RS06370 PF01926 50S ribosome-binding GTPase CDH84_RS06370 PF01018 GTP1/OBG CDH84_RS06370 PF09269 Domain of unknown function (DUF1967) CDH84_RS06380 PF02073 Thermophilic metalloprotease (M29) CDH84_RS06390 PF01425 Amidase CDH84_RS06395 PF00849 RNA pseudouridylate synthase CDH84_RS06395 PF01479 S4 domain CDH84_RS06400 PF00248 Aldo/keto reductase family CDH84_RS06405 PF00881 Nitroreductase family CDH84_RS06410 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CDH84_RS06415 PF00535 Glycosyl transferase family 2 CDH84_RS06420 PF00324 Amino acid permease CDH84_RS06425 PF01668 SmpB protein CDH84_RS06430 PF08206 Ribonuclease B OB domain CDH84_RS06430 PF17876 Cold shock domain CDH84_RS06430 PF00773 RNB domain CDH84_RS06430 PF00575 S1 RNA binding domain CDH84_RS06440 PF00471 Ribosomal protein L33 CDH84_RS06445 PF07690 Major Facilitator Superfamily CDH84_RS06445 PF00083 Sugar (and other) transporter CDH84_RS06455 PF00005 ABC transporter CDH84_RS06455 PF13732 Domain of unknown function (DUF4162) CDH84_RS06460 PF01121 Dephospho-CoA kinase CDH84_RS06465 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain CDH84_RS06465 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain CDH84_RS06465 PF06827 Zinc finger found in FPG and IleRS CDH84_RS06470 PF01381 Helix-turn-helix CDH84_RS06520 PF07650 KH domain CDH84_RS06520 PF01926 50S ribosome-binding GTPase CDH84_RS06525 PF01219 Prokaryotic diacylglycerol kinase CDH84_RS06530 PF02130 Uncharacterized protein family UPF0054 CDH84_RS06550 PF13344 Haloacid dehalogenase-like hydrolase CDH84_RS06550 PF00293 NUDIX domain CDH84_RS06560 PF02562 PhoH-like protein CDH84_RS06565 PF06100 MCRA family CDH84_RS06570 PF06855 YozE SAM-like fold CDH84_RS06575 PF01625 Peptide methionine sulfoxide reductase CDH84_RS06585 PF01765 Ribosome recycling factor CDH84_RS06590 PF00696 Amino acid kinase family CDH84_RS06595 PF00005 ABC transporter CDH84_RS06600 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CDH84_RS06600 PF00005 ABC transporter CDH84_RS06605 PF00528 Binding-protein-dependent transport system inner membrane component CDH84_RS06605 PF12911 N-terminal TM domain of oligopeptide transport permease C CDH84_RS06610 PF00528 Binding-protein-dependent transport system inner membrane component CDH84_RS06615 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CDH84_RS06620 PF00687 Ribosomal protein L1p/L10e family CDH84_RS06625 PF00298 Ribosomal protein L11, RNA binding domain CDH84_RS06625 PF03946 Ribosomal protein L11, N-terminal domain CDH84_RS06635 PF07690 Major Facilitator Superfamily CDH84_RS06645 PF01609 Transposase DDE domain CDH84_RS06645 PF13808 DDE_Tnp_1-associated CDH84_RS06650 PF07687 Peptidase dimerisation domain CDH84_RS06650 PF01546 Peptidase family M20/M25/M40 CDH84_RS06655 PF03466 LysR substrate binding domain CDH84_RS06655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDH84_RS06675 PF00425 chorismate binding enzyme CDH84_RS06675 PF04715 Anthranilate synthase component I, N terminal region CDH84_RS06680 PF17854 FtsK alpha domain CDH84_RS06680 PF09397 Ftsk gamma domain CDH84_RS06680 PF01580 FtsK/SpoIIIE family CDH84_RS06685 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CDH84_RS06690 PF00950 ABC 3 transport family CDH84_RS06695 PF00005 ABC transporter CDH84_RS06700 PF01297 Zinc-uptake complex component A periplasmic CDH84_RS06710 PF01048 Phosphorylase superfamily CDH84_RS06720 PF00293 NUDIX domain CDH84_RS06725 PF14602 Hexapeptide repeat of succinyl-transferase CDH84_RS06725 PF00132 Bacterial transferase hexapeptide (six repeats) CDH84_RS06725 PF12804 MobA-like NTP transferase domain CDH84_RS06745 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CDH84_RS06745 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CDH84_RS06780 PF00535 Glycosyl transferase family 2 CDH84_RS06805 PF05525 Branched-chain amino acid transport protein CDH84_RS06810 PF09334 tRNA synthetases class I (M) CDH84_RS06810 PF01588 Putative tRNA binding domain CDH84_RS06815 PF09313 Domain of unknown function (DUF1971) CDH84_RS06815 PF03848 Tellurite resistance protein TehB CDH84_RS06830 PF02378 Phosphotransferase system, EIIC CDH84_RS06840 PF03372 Endonuclease/Exonuclease/phosphatase family CDH84_RS06845 PF03960 ArsC family CDH84_RS06850 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CDH84_RS06850 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CDH84_RS06855 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CDH84_RS06855 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CDH84_RS06870 PF03932 CutC family CDH84_RS06885 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CDH84_RS06890 PF06156 Initiation control protein YabA CDH84_RS06895 PF09115 DNA polymerase III, delta subunit, C terminal CDH84_RS06900 PF02223 Thymidylate kinase CDH84_RS06910 PF00571 CBS domain CDH84_RS06915 PF00005 ABC transporter CDH84_RS06920 PF12399 Branched-chain amino acid ATP-binding cassette transporter CDH84_RS06920 PF00005 ABC transporter CDH84_RS06925 PF02653 Branched-chain amino acid transport system / permease component CDH84_RS06925 PF11862 Domain of unknown function (DUF3382) CDH84_RS06930 PF02653 Branched-chain amino acid transport system / permease component CDH84_RS06935 PF13458 Periplasmic binding protein CDH84_RS06940 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) CDH84_RS06945 PF00574 Clp protease CDH84_RS06955 PF00155 Aminotransferase class I and II CDH84_RS06960 PF00588 SpoU rRNA Methylase family CDH84_RS06965 PF13520 Amino acid permease CDH84_RS06970 PF02254 TrkA-N domain CDH84_RS06970 PF02080 TrkA-C domain CDH84_RS06975 PF02386 Cation transport protein CDH84_RS06980 PF01809 Putative membrane protein insertion efficiency factor CDH84_RS06985 PF00849 RNA pseudouridylate synthase CDH84_RS06985 PF01479 S4 domain CDH84_RS06990 PF04079 Segregation and condensation complex subunit ScpB CDH84_RS06995 PF02616 Segregation and condensation protein ScpA CDH84_RS07000 PF00589 Phage integrase family CDH84_RS07015 PF01725 Ham1 family CDH84_RS07020 PF01177 Asp/Glu/Hydantoin racemase CDH84_RS07025 PF03672 Uncharacterised protein family (UPF0154) CDH84_RS07035 PF08279 HTH domain CDH84_RS07035 PF02829 3H domain CDH84_RS07040 PF01027 Inhibitor of apoptosis-promoting Bax1 CDH84_RS07050 PF00588 SpoU rRNA Methylase family CDH84_RS07050 PF08032 RNA 2'-O ribose methyltransferase substrate binding CDH84_RS07055 PF00708 Acylphosphatase CDH84_RS07060 PF02096 60Kd inner membrane protein CDH84_RS07065 PF00528 Binding-protein-dependent transport system inner membrane component CDH84_RS07070 PF00497 Bacterial extracellular solute-binding proteins, family 3 CDH84_RS07075 PF01425 Amidase CDH84_RS07080 PF01272 Transcription elongation factor, GreA/GreB, C-term CDH84_RS07080 PF03449 Transcription elongation factor, N-terminal CDH84_RS07085 PF02618 YceG-like family CDH84_RS07095 PF01225 Mur ligase family, catalytic domain CDH84_RS07095 PF02875 Mur ligase family, glutamate ligase domain CDH84_RS07095 PF08245 Mur ligase middle domain CDH84_RS07110 PF00176 SNF2 family N-terminal domain CDH84_RS07110 PF04434 SWIM zinc finger CDH84_RS07110 PF00271 Helicase conserved C-terminal domain CDH84_RS07115 PF01926 50S ribosome-binding GTPase CDH84_RS07115 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CDH84_RS07120 PF07319 Primosomal protein DnaI N-terminus CDH84_RS07120 PF01695 IstB-like ATP binding protein CDH84_RS07130 PF03477 ATP cone domain CDH84_RS07135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDH84_RS07135 PF00512 His Kinase A (phospho-acceptor) domain CDH84_RS07135 PF18719 ArlS sensor domain CDH84_RS07140 PF00486 Transcriptional regulatory protein, C terminal CDH84_RS07140 PF00072 Response regulator receiver domain CDH84_RS07150 PF01435 Peptidase family M48 CDH84_RS07155 PF04011 LemA family CDH84_RS07160 PF02527 rRNA small subunit methyltransferase G CDH84_RS07165 PF02386 Cation transport protein CDH84_RS07170 PF02080 TrkA-C domain CDH84_RS07170 PF02254 TrkA-N domain CDH84_RS07180 PF00005 ABC transporter CDH84_RS07180 PF12558 ATP-binding cassette cobalt transporter CDH84_RS07185 PF07155 ECF-type riboflavin transporter, S component CDH84_RS07190 PF00375 Sodium:dicarboxylate symporter family CDH84_RS07195 PF05525 Branched-chain amino acid transport protein CDH84_RS07200 PF08240 Alcohol dehydrogenase GroES-like domain CDH84_RS07200 PF13823 Alcohol dehydrogenase GroES-associated CDH84_RS07200 PF00107 Zinc-binding dehydrogenase CDH84_RS07205 PF00528 Binding-protein-dependent transport system inner membrane component CDH84_RS07210 PF09383 NIL domain CDH84_RS07210 PF00005 ABC transporter CDH84_RS07215 PF07687 Peptidase dimerisation domain CDH84_RS07215 PF01546 Peptidase family M20/M25/M40 CDH84_RS07220 PF03180 NLPA lipoprotein CDH84_RS07225 PF00497 Bacterial extracellular solute-binding proteins, family 3 CDH84_RS07230 PF07722 Peptidase C26 CDH84_RS07240 PF01709 Transcriptional regulator CDH84_RS07250 PF02733 Dak1 domain CDH84_RS07255 PF14278 Transcriptional regulator C-terminal region CDH84_RS07255 PF00440 Bacterial regulatory proteins, tetR family CDH84_RS07265 PF02733 Dak1 domain CDH84_RS07270 PF02734 DAK2 domain CDH84_RS07275 PF03610 PTS system fructose IIA component CDH84_RS07280 PF00230 Major intrinsic protein CDH84_RS07290 PF13411 MerR HTH family regulatory protein CDH84_RS07290 PF07739 TipAS antibiotic-recognition domain CDH84_RS07295 PF05636 HIGH Nucleotidyl Transferase CDH84_RS07305 PF13649 Methyltransferase domain CDH84_RS07320 PF01966 HD domain CDH84_RS07325 PF01467 Cytidylyltransferase-like CDH84_RS07330 PF01985 CRS1 / YhbY (CRM) domain CDH84_RS07335 PF01926 50S ribosome-binding GTPase CDH84_RS07350 PF02637 GatB domain CDH84_RS07350 PF02934 GatB/GatE catalytic domain CDH84_RS07355 PF01425 Amidase CDH84_RS07360 PF02686 Glu-tRNAGln amidotransferase C subunit CDH84_RS07365 PF00391 PEP-utilising enzyme, mobile domain CDH84_RS07365 PF02896 PEP-utilising enzyme, TIM barrel domain CDH84_RS07365 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain CDH84_RS07370 PF03618 Kinase/pyrophosphorylase CDH84_RS07375 PF00571 CBS domain CDH84_RS07375 PF08279 HTH domain CDH84_RS07380 PF00378 Enoyl-CoA hydratase/isomerase CDH84_RS07380 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CDH84_RS07380 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CDH84_RS07385 PF00857 Isochorismatase family CDH84_RS07390 PF08222 CodY helix-turn-helix domain CDH84_RS07390 PF06018 CodY GAF-like domain CDH84_RS07395 PF00155 Aminotransferase class I and II CDH84_RS07400 PF00582 Universal stress protein family CDH84_RS07410 PF17763 Glutaminase/Asparaginase C-terminal domain CDH84_RS07410 PF00710 Asparaginase, N-terminal CDH84_RS07415 PF08501 Shikimate dehydrogenase substrate binding domain CDH84_RS07415 PF18317 Shikimate 5'-dehydrogenase C-terminal domain CDH84_RS07420 PF00248 Aldo/keto reductase family CDH84_RS07425 PF00270 DEAD/DEAH box helicase CDH84_RS07425 PF17191 RecG wedge domain CDH84_RS07425 PF00271 Helicase conserved C-terminal domain CDH84_RS07430 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase CDH84_RS07430 PF05257 CHAP domain CDH84_RS07435 PF01168 Alanine racemase, N-terminal domain CDH84_RS07435 PF00842 Alanine racemase, C-terminal domain CDH84_RS07440 PF01648 4'-phosphopantetheinyl transferase superfamily CDH84_RS07445 PF00793 DAHP synthetase I family CDH84_RS07450 PF07517 SecA DEAD-like domain CDH84_RS07450 PF02810 SEC-C motif CDH84_RS07450 PF07516 SecA Wing and Scaffold domain CDH84_RS07450 PF01043 SecA preprotein cross-linking domain CDH84_RS07455 PF01238 Phosphomannose isomerase type I CDH84_RS07460 PF00480 ROK family CDH84_RS07465 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CDH84_RS07465 PF00367 phosphotransferase system, EIIB CDH84_RS07465 PF02378 Phosphotransferase system, EIIC CDH84_RS07470 PF00251 Glycosyl hydrolases family 32 N-terminal domain CDH84_RS07470 PF08244 Glycosyl hydrolases family 32 C terminal CDH84_RS07475 PF00356 Bacterial regulatory proteins, lacI family CDH84_RS07480 PF01029 NusB family CDH84_RS07485 PF03780 Asp23 family, cell envelope-related function CDH84_RS07490 PF08207 Elongation factor P (EF-P) KOW-like domain CDH84_RS07490 PF01132 Elongation factor P (EF-P) OB domain CDH84_RS07490 PF09285 Elongation factor P, C-terminal CDH84_RS07540 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CDH84_RS07555 PF07690 Major Facilitator Superfamily CDH84_RS07565 PF00005 ABC transporter CDH84_RS07565 PF17760 UvrA interaction domain CDH84_RS07565 PF17755 UvrA DNA-binding domain CDH84_RS07580 PF01084 Ribosomal protein S18 CDH84_RS07585 PF00436 Single-strand binding protein family CDH84_RS07590 PF01250 Ribosomal protein S6 CDH84_RS07595 PF00730 HhH-GPD superfamily base excision DNA repair protein CDH84_RS07595 PF14815 NUDIX domain CDH84_RS07600 PF01381 Helix-turn-helix CDH84_RS07605 PF00085 Thioredoxin CDH84_RS07615 PF01713 Smr domain CDH84_RS07615 PF00488 MutS domain V CDH84_RS07630 PF11858 Domain of unknown function (DUF3378) CDH84_RS07630 PF01351 Ribonuclease HII CDH84_RS07635 PF10502 Signal peptidase, peptidase S26 CDH84_RS07640 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain CDH84_RS07640 PF13538 UvrD-like helicase C-terminal domain CDH84_RS07640 PF14490 Helix-hairpin-helix containing domain CDH84_RS07650 PF11798 IMS family HHH motif CDH84_RS07650 PF11799 impB/mucB/samB family C-terminal domain CDH84_RS07650 PF00817 impB/mucB/samB family CDH84_RS07655 PF01228 Glycine radical CDH84_RS07655 PF02901 Pyruvate formate lyase-like CDH84_RS07660 PF01243 Pyridoxamine 5'-phosphate oxidase CDH84_RS07665 PF00144 Beta-lactamase CDH84_RS07680 PF00230 Major intrinsic protein CDH84_RS07690 PF07690 Major Facilitator Superfamily CDH84_RS07695 PF13545 Crp-like helix-turn-helix domain CDH84_RS07700 PF02129 X-Pro dipeptidyl-peptidase (S15 family) CDH84_RS07700 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain CDH84_RS07700 PF09168 X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal CDH84_RS07710 PF00348 Polyprenyl synthetase CDH84_RS07715 PF00664 ABC transporter transmembrane region CDH84_RS07715 PF00005 ABC transporter CDH84_RS07720 PF00005 ABC transporter CDH84_RS07720 PF00664 ABC transporter transmembrane region CDH84_RS07725 PF02322 Cytochrome bd terminal oxidase subunit II CDH84_RS07730 PF01654 Cytochrome bd terminal oxidase subunit I CDH84_RS07735 PF07992 Pyridine nucleotide-disulphide oxidoreductase CDH84_RS07755 PF02384 N-6 DNA Methylase CDH84_RS07755 PF12161 HsdM N-terminal domain CDH84_RS07765 PF02779 Transketolase, pyrimidine binding domain CDH84_RS07765 PF02780 Transketolase, C-terminal domain CDH84_RS07765 PF00456 Transketolase, thiamine diphosphate binding domain CDH84_RS07770 PF00923 Transaldolase/Fructose-6-phosphate aldolase CDH84_RS07775 PF00834 Ribulose-phosphate 3 epimerase family CDH84_RS07780 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CDH84_RS07785 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CDH84_RS07790 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CDH84_RS07795 PF00874 PRD domain CDH84_RS07795 PF08279 HTH domain CDH84_RS07795 PF05043 Mga helix-turn-helix domain CDH84_RS07795 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CDH84_RS07810 PF03466 LysR substrate binding domain CDH84_RS07810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDH84_RS07815 PF00106 short chain dehydrogenase CDH84_RS07830 PF00248 Aldo/keto reductase family CDH84_RS07835 PF04229 GrpB protein CDH84_RS07840 PF02567 Phenazine biosynthesis-like protein CDH84_RS07850 PF02575 YbaB/EbfC DNA-binding family CDH84_RS07860 PF07739 TipAS antibiotic-recognition domain CDH84_RS07860 PF13411 MerR HTH family regulatory protein CDH84_RS07870 PF04394 Protein of unknown function, DUF536 CDH84_RS07870 PF08279 HTH domain CDH84_RS07885 PF00253 Ribosomal protein S14p/S29e CDH84_RS07900 PF00814 Glycoprotease family CDH84_RS07905 PF00583 Acetyltransferase (GNAT) family CDH84_RS07910 PF00814 Glycoprotease family CDH84_RS07915 PF07288 Protein of unknown function (DUF1447) CDH84_RS07920 PF00753 Metallo-beta-lactamase superfamily CDH84_RS07920 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain CDH84_RS07920 PF17770 Ribonuclease J C-terminal domain CDH84_RS07925 PF01476 LysM domain CDH84_RS07925 PF05257 CHAP domain CDH84_RS07930 PF03951 Glutamine synthetase, beta-Grasp domain CDH84_RS07930 PF00120 Glutamine synthetase, catalytic domain CDH84_RS07935 PF13411 MerR HTH family regulatory protein CDH84_RS07945 PF00162 Phosphoglycerate kinase CDH84_RS07950 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) CDH84_RS07955 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CDH84_RS07955 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CDH84_RS07960 PF03144 Elongation factor Tu domain 2 CDH84_RS07960 PF00679 Elongation factor G C-terminus CDH84_RS07960 PF00009 Elongation factor Tu GTP binding domain CDH84_RS07960 PF14492 Elongation Factor G, domain II CDH84_RS07960 PF03764 Elongation factor G, domain IV CDH84_RS07965 PF00177 Ribosomal protein S7p/S5e CDH84_RS07970 PF00164 Ribosomal protein S12/S23 CDH84_RS07980 PF00156 Phosphoribosyl transferase domain CDH84_RS07980 PF09182 Bacterial purine repressor, N-terminal CDH84_RS07985 PF01966 HD domain CDH84_RS07985 PF01336 OB-fold nucleic acid binding domain CDH84_RS07990 PF02646 RmuC family CDH84_RS08000 PF00834 Ribulose-phosphate 3 epimerase family CDH84_RS08005 PF03193 RsgA GTPase CDH84_RS08005 PF16745 RsgA N-terminal domain CDH84_RS08010 PF08241 Methyltransferase domain CDH84_RS08015 PF00398 Ribosomal RNA adenine dimethylase CDH84_RS08025 PF13331 Domain of unknown function (DUF4093) CDH84_RS08030 PF01026 TatD related DNase CDH84_RS08055 PF04914 DltD protein CDH84_RS08060 PF00550 Phosphopantetheine attachment site CDH84_RS08065 PF03062 MBOAT, membrane-bound O-acyltransferase family CDH84_RS08070 PF13193 AMP-binding enzyme C-terminal domain CDH84_RS08070 PF00501 AMP-binding enzyme CDH84_RS08080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDH84_RS08080 PF00512 His Kinase A (phospho-acceptor) domain CDH84_RS08085 PF00072 Response regulator receiver domain CDH84_RS08085 PF00486 Transcriptional regulatory protein, C terminal CDH84_RS08090 PF00468 Ribosomal protein L34 CDH84_RS08095 PF07670 Nucleoside recognition CDH84_RS08105 PF00528 Binding-protein-dependent transport system inner membrane component CDH84_RS08110 PF00005 ABC transporter CDH84_RS08110 PF00571 CBS domain CDH84_RS08120 PF09363 XFP C-terminal domain CDH84_RS08120 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase CDH84_RS08120 PF09364 XFP N-terminal domain CDH84_RS08140 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CDH84_RS08140 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CDH84_RS08150 PF03611 PTS system sugar-specific permease component CDH84_RS08155 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CDH84_RS08155 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CDH84_RS08165 PF00356 Bacterial regulatory proteins, lacI family CDH84_RS08170 PF00923 Transaldolase/Fructose-6-phosphate aldolase CDH84_RS08175 PF00596 Class II Aldolase and Adducin N-terminal domain CDH84_RS08180 PF01261 Xylose isomerase-like TIM barrel CDH84_RS08185 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CDH84_RS08190 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CDH84_RS08195 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CDH84_RS08200 PF03611 PTS system sugar-specific permease component CDH84_RS08215 PF00709 Adenylosuccinate synthetase CDH84_RS08230 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CDH84_RS08230 PF18419 ATP-grasp-like domain CDH84_RS08230 PF04262 Glutamate-cysteine ligase CDH84_RS08245 PF01430 Hsp33 protein CDH84_RS08250 PF01207 Dihydrouridine synthase (Dus) CDH84_RS08255 PF01712 Deoxynucleoside kinase CDH84_RS08265 PF07724 AAA domain (Cdc48 subfamily) CDH84_RS08265 PF17871 AAA lid domain CDH84_RS08265 PF02861 Clp amino terminal domain, pathogenicity island component CDH84_RS08265 PF00004 ATPase family associated with various cellular activities (AAA) CDH84_RS08265 PF10431 C-terminal, D2-small domain, of ClpB protein CDH84_RS08270 PF17727 CtsR C-terminal dimerization domain CDH84_RS08270 PF05848 CtsR N-terminal HTH domain CDH84_RS08280 PF00889 Elongation factor TS CDH84_RS08285 PF00318 Ribosomal protein S2 CDH84_RS08290 PF00578 AhpC/TSA family CDH84_RS08295 PF07992 Pyridine nucleotide-disulphide oxidoreductase CDH84_RS08295 PF13192 Thioredoxin domain CDH84_RS08305 PF00999 Sodium/hydrogen exchanger family CDH84_RS08315 PF02016 LD-carboxypeptidase N-terminal domain CDH84_RS08315 PF17676 LD-carboxypeptidase C-terminal domain CDH84_RS08320 PF05649 Peptidase family M13 CDH84_RS08320 PF01431 Peptidase family M13 CDH84_RS08345 PF01327 Polypeptide deformylase CDH84_RS08350 PF00356 Bacterial regulatory proteins, lacI family CDH84_RS08375 PF07733 Bacterial DNA polymerase III alpha NTPase domain CDH84_RS08375 PF14579 Helix-hairpin-helix motif CDH84_RS08375 PF02811 PHP domain CDH84_RS08375 PF00929 Exonuclease CDH84_RS08375 PF14480 DNA polymerase III polC-type N-terminus I CDH84_RS08375 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CDH84_RS08375 PF11490 DNA polymerase III polC-type N-terminus II CDH84_RS08380 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase CDH84_RS08380 PF01476 LysM domain CDH84_RS08385 PF04073 Aminoacyl-tRNA editing domain CDH84_RS08385 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CDH84_RS08385 PF03129 Anticodon binding domain CDH84_RS08390 PF13180 PDZ domain CDH84_RS08390 PF02163 Peptidase family M50 CDH84_RS08400 PF01255 Putative undecaprenyl diphosphate synthase CDH84_RS08405 PF02699 Preprotein translocase subunit CDH84_RS08420 PF03949 Malic enzyme, NAD binding domain CDH84_RS08420 PF00390 Malic enzyme, N-terminal domain CDH84_RS08425 PF03390 2-hydroxycarboxylate transporter family CDH84_RS08430 PF00989 PAS fold CDH84_RS08430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDH84_RS08430 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain CDH84_RS08430 PF17203 Single cache domain 3 CDH84_RS08435 PF00072 Response regulator receiver domain CDH84_RS08440 PF16363 GDP-mannose 4,6 dehydratase CDH84_RS08445 PF00128 Alpha amylase, catalytic domain CDH84_RS08450 PF17912 MalK OB fold domain CDH84_RS08450 PF03459 TOBE domain CDH84_RS08450 PF00005 ABC transporter CDH84_RS08455 PF13556 PucR C-terminal helix-turn-helix domain CDH84_RS08460 PF01263 Aldose 1-epimerase CDH84_RS08465 PF01791 DeoC/LacD family aldolase CDH84_RS08470 PF00294 pfkB family carbohydrate kinase CDH84_RS08475 PF02502 Ribose/Galactose Isomerase CDH84_RS08480 PF02502 Ribose/Galactose Isomerase CDH84_RS08485 PF04650 YSIRK type signal peptide CDH84_RS08485 PF02973 Sialidase, N-terminal domain CDH84_RS08485 PF13088 BNR repeat-like domain CDH84_RS08510 PF00455 DeoR C terminal sensor domain CDH84_RS08510 PF08220 DeoR-like helix-turn-helix domain CDH84_RS08525 PF02580 D-Tyr-tRNA(Tyr) deacylase CDH84_RS08530 PF02824 TGS domain CDH84_RS08530 PF04607 Region found in RelA / SpoT proteins CDH84_RS08530 PF13291 ACT domain CDH84_RS08535 PF02872 5'-nucleotidase, C-terminal domain CDH84_RS08535 PF00149 Calcineurin-like phosphoesterase CDH84_RS08540 PF07972 NrdI Flavodoxin like CDH84_RS08545 PF05343 M42 glutamyl aminopeptidase CDH84_RS08560 PF00072 Response regulator receiver domain CDH84_RS08560 PF12833 Helix-turn-helix domain CDH84_RS08565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDH84_RS08565 PF06580 Histidine kinase CDH84_RS08570 PF03613 PTS system mannose/fructose/sorbose family IID component CDH84_RS08575 PF03609 PTS system sorbose-specific iic component CDH84_RS08580 PF03830 PTS system sorbose subfamily IIB component CDH84_RS08590 PF01757 Acyltransferase family CDH84_RS08590 PF01168 Alanine racemase, N-terminal domain CDH84_RS08590 PF00842 Alanine racemase, C-terminal domain CDH84_RS08610 PF00005 ABC transporter CDH84_RS08610 PF13732 Domain of unknown function (DUF4162) CDH84_RS08620 PF00664 ABC transporter transmembrane region CDH84_RS08620 PF00005 ABC transporter CDH84_RS08620 PF03412 Peptidase C39 family CDH84_RS08625 PF00989 PAS fold CDH84_RS08625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDH84_RS08625 PF17203 Single cache domain 3 CDH84_RS08625 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain CDH84_RS08640 PF03372 Endonuclease/Exonuclease/phosphatase family CDH84_RS08645 PF02378 Phosphotransferase system, EIIC CDH84_RS08645 PF00367 phosphotransferase system, EIIB CDH84_RS08645 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CDH84_RS08650 PF16736 Single Cache-like CDH84_RS08650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDH84_RS08650 PF00512 His Kinase A (phospho-acceptor) domain CDH84_RS08650 PF00989 PAS fold CDH84_RS08655 PF00072 Response regulator receiver domain CDH84_RS08655 PF00486 Transcriptional regulatory protein, C terminal CDH84_RS08660 PF01895 PhoU domain CDH84_RS08665 PF00005 ABC transporter CDH84_RS08670 PF00528 Binding-protein-dependent transport system inner membrane component CDH84_RS08675 PF00528 Binding-protein-dependent transport system inner membrane component CDH84_RS08680 PF12849 PBP superfamily domain CDH84_RS08690 PF04452 RNA methyltransferase CDH84_RS08705 PF07739 TipAS antibiotic-recognition domain CDH84_RS08705 PF13411 MerR HTH family regulatory protein CDH84_RS08715 PF00293 NUDIX domain CDH84_RS08730 PF00583 Acetyltransferase (GNAT) family CDH84_RS08735 PF12002 MgsA AAA+ ATPase C terminal CDH84_RS08735 PF16193 AAA C-terminal domain CDH84_RS08735 PF05496 Holliday junction DNA helicase RuvB P-loop domain CDH84_RS08765 PF00589 Phage integrase family CDH84_RS08775 PF18106 Rolling Circle replication initiation protein N-terminal domain CDH84_RS08775 PF02486 Replication initiation factor CDH84_RS08800 PF08279 HTH domain CDH84_RS08800 PF13280 WYL domain CDH84_RS08805 PF01965 DJ-1/PfpI family CDH84_RS08865 PF00005 ABC transporter CDH84_RS08875 PF01381 Helix-turn-helix CDH84_RS08895 PF03819 MazG nucleotide pyrophosphohydrolase domain CDH84_RS08900 PF03641 Possible lysine decarboxylase CDH84_RS08910 PF00581 Rhodanese-like domain CDH84_RS08915 PF07373 CAMP factor (Cfa) CDH84_RS08930 PF00465 Iron-containing alcohol dehydrogenase CDH84_RS08940 PF02219 Methylenetetrahydrofolate reductase CDH84_RS08940 PF02574 Homocysteine S-methyltransferase CDH84_RS08945 PF01717 Cobalamin-independent synthase, Catalytic domain CDH84_RS08945 PF08267 Cobalamin-independent synthase, N-terminal domain CDH84_RS08955 PF03591 AzlC protein CDH84_RS08965 PF02225 PA domain CDH84_RS08965 PF06280 Fn3-like domain CDH84_RS08965 PF00082 Subtilase family CDH84_RS08970 PF00486 Transcriptional regulatory protein, C terminal CDH84_RS08970 PF00072 Response regulator receiver domain CDH84_RS08975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDH84_RS08975 PF00672 HAMP domain CDH84_RS08975 PF00512 His Kinase A (phospho-acceptor) domain CDH84_RS08985 PF13603 Leucyl-tRNA synthetase, Domain 2 CDH84_RS08985 PF08264 Anticodon-binding domain of tRNA CDH84_RS08985 PF00133 tRNA synthetases class I (I, L, M and V) CDH84_RS08985 PF09334 tRNA synthetases class I (M) CDH84_RS08990 PF07690 Major Facilitator Superfamily CDH84_RS08995 PF01734 Patatin-like phospholipase CDH84_RS09000 PF00467 KOW motif CDH84_RS09000 PF02357 Transcription termination factor nusG CDH84_RS09005 PF17573 GA-like domain CDH84_RS09005 PF00746 LPXTG cell wall anchor motif CDH84_RS09005 PF01378 B domain CDH84_RS09015 PF00471 Ribosomal protein L33 CDH84_RS09020 PF00912 Transglycosylase CDH84_RS09020 PF00905 Penicillin binding protein transpeptidase domain CDH84_RS09025 PF00849 RNA pseudouridylate synthase CDH84_RS09025 PF01479 S4 domain CDH84_RS09035 PF01676 Metalloenzyme superfamily CDH84_RS09040 PF01791 DeoC/LacD family aldolase CDH84_RS09045 PF01773 Na+ dependent nucleoside transporter N-terminus CDH84_RS09045 PF07670 Nucleoside recognition CDH84_RS09045 PF07662 Na+ dependent nucleoside transporter C-terminus CDH84_RS09050 PF01048 Phosphorylase superfamily CDH84_RS09065 PF00118 TCP-1/cpn60 chaperonin family CDH84_RS09070 PF00166 Chaperonin 10 Kd subunit CDH84_RS09075 PF00005 ABC transporter CDH84_RS09090 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CDH84_RS09095 PF03883 Peroxide stress protein YaaA CDH84_RS09110 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CDH84_RS09120 PF03477 ATP cone domain CDH84_RS09120 PF13597 Anaerobic ribonucleoside-triphosphate reductase CDH84_RS09135 PF06949 Protein of unknown function (DUF1292) CDH84_RS09140 PF03652 Holliday junction resolvase CDH84_RS09145 PF06135 IreB regulatory phosphoprotein CDH84_RS09150 PF03960 ArsC family CDH84_RS09155 PF00154 recA bacterial DNA recombination protein CDH84_RS09160 PF00994 Probable molybdopterin binding domain CDH84_RS09160 PF02464 Competence-damaged protein CDH84_RS09160 PF18146 Damage-inducible protein CinA KH domain CDH84_RS09165 PF03352 Methyladenine glycosylase CDH84_RS09170 PF07499 RuvA, C-terminal domain CDH84_RS09170 PF01330 RuvA N terminal domain CDH84_RS09180 PF08676 MutL C terminal dimerisation domain CDH84_RS09180 PF01119 DNA mismatch repair protein, C-terminal domain CDH84_RS09190 PF00313 'Cold-shock' DNA-binding domain CDH84_RS09195 PF05190 MutS family domain IV CDH84_RS09195 PF05192 MutS domain III CDH84_RS09195 PF05188 MutS domain II CDH84_RS09195 PF01624 MutS domain I CDH84_RS09195 PF00488 MutS domain V CDH84_RS09200 PF02863 Arginine repressor, C-terminal domain CDH84_RS09200 PF01316 Arginine repressor, DNA binding domain CDH84_RS09205 PF00750 tRNA synthetases class I (R) CDH84_RS09205 PF05746 DALR anticodon binding domain CDH84_RS09205 PF03485 Arginyl tRNA synthetase N terminal domain CDH84_RS09215 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CDH84_RS09215 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CDH84_RS09220 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CDH84_RS09220 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CDH84_RS09225 PF02938 GAD domain CDH84_RS09225 PF00152 tRNA synthetases class II (D, K and N) CDH84_RS09225 PF01336 OB-fold nucleic acid binding domain CDH84_RS09230 PF13393 Histidyl-tRNA synthetase CDH84_RS09230 PF03129 Anticodon binding domain CDH84_RS09235 PF01783 Ribosomal L32p protein family CDH84_RS09240 PF00471 Ribosomal protein L33 CDH84_RS09265 PF01022 Bacterial regulatory protein, arsR family CDH84_RS09305 PF00589 Phage integrase family CDH84_RS09305 PF02899 Phage integrase, N-terminal SAM-like domain CDH84_RS09315 PF00486 Transcriptional regulatory protein, C terminal CDH84_RS09315 PF00072 Response regulator receiver domain CDH84_RS09320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDH84_RS09320 PF00512 His Kinase A (phospho-acceptor) domain CDH84_RS09320 PF18719 ArlS sensor domain CDH84_RS09325 PF03606 C4-dicarboxylate anaerobic carrier CDH84_RS09330 PF00696 Amino acid kinase family CDH84_RS09335 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CDH84_RS09335 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CDH84_RS09340 PF00512 His Kinase A (phospho-acceptor) domain CDH84_RS09340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDH84_RS09340 PF00989 PAS fold CDH84_RS09345 PF08664 YcbB domain CDH84_RS09345 PF00072 Response regulator receiver domain CDH84_RS09350 PF00005 ABC transporter CDH84_RS09350 PF00571 CBS domain CDH84_RS09355 PF00528 Binding-protein-dependent transport system inner membrane component CDH84_RS09360 PF03706 Lysylphosphatidylglycerol synthase TM region CDH84_RS09360 PF09924 Uncharacterised conserved protein (DUF2156) CDH84_RS09365 PF00561 alpha/beta hydrolase fold CDH84_RS09370 PF06993 Protein of unknown function (DUF1304) CDH84_RS09375 PF01061 ABC-2 type transporter CDH84_RS09480 PF05154 TM2 domain CDH84_RS09500 PF00589 Phage integrase family CDH84_RS09500 PF14659 Phage integrase, N-terminal SAM-like domain CDH84_RS09505 PF00163 Ribosomal protein S4/S9 N-terminal domain CDH84_RS09505 PF01479 S4 domain CDH84_RS09520 PF00772 DnaB-like helicase N terminal domain CDH84_RS09520 PF03796 DnaB-like helicase C terminal domain CDH84_RS09525 PF03948 Ribosomal protein L9, C-terminal domain CDH84_RS09525 PF01281 Ribosomal protein L9, N-terminal domain CDH84_RS09530 PF01368 DHH family CDH84_RS09530 PF02272 DHHA1 domain CDH84_RS09535 PF01134 Glucose inhibited division protein A CDH84_RS09535 PF13932 GidA associated domain CDH84_RS09540 PF01914 MarC family integral membrane protein CDH84_RS09550 PF01842 ACT domain CDH84_RS09550 PF03315 Serine dehydratase beta chain CDH84_RS09555 PF03313 Serine dehydratase alpha chain CDH84_RS09560 PF06737 Transglycosylase-like domain CDH84_RS09565 PF05257 CHAP domain CDH84_RS09565 PF01476 LysM domain CDH84_RS09570 PF02361 Cobalt transport protein CDH84_RS09575 PF00005 ABC transporter CDH84_RS09580 PF00005 ABC transporter CDH84_RS09585 PF01066 CDP-alcohol phosphatidyltransferase CDH84_RS09590 PF05193 Peptidase M16 inactive domain CDH84_RS09590 PF00675 Insulinase (Peptidase family M16) CDH84_RS09595 PF05193 Peptidase M16 inactive domain CDH84_RS09605 PF02463 RecF/RecN/SMC N terminal domain CDH84_RS09610 PF06800 Sugar transport protein CDH84_RS09620 PF00478 IMP dehydrogenase / GMP reductase domain CDH84_RS09620 PF00571 CBS domain CDH84_RS09625 PF02863 Arginine repressor, C-terminal domain CDH84_RS09625 PF01316 Arginine repressor, DNA binding domain CDH84_RS09630 PF13545 Crp-like helix-turn-helix domain CDH84_RS09630 PF00027 Cyclic nucleotide-binding domain CDH84_RS09645 PF13673 Acetyltransferase (GNAT) domain CDH84_RS09650 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CDH84_RS09650 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CDH84_RS09655 PF13520 Amino acid permease CDH84_RS09660 PF00696 Amino acid kinase family CDH84_RS09665 PF00579 tRNA synthetases class I (W and Y) CDH84_RS09675 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CDH84_RS09675 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CDH84_RS09680 PF00005 ABC transporter CDH84_RS09680 PF12848 ABC transporter CDH84_RS09685 PF09586 Bacterial membrane protein YfhO CDH84_RS09705 PF02590 Predicted SPOUT methyltransferase CDH84_RS09710 PF13180 PDZ domain CDH84_RS09715 PF17762 HTH domain found in ParB protein CDH84_RS09715 PF02195 ParB-like nuclease domain CDH84_RS09720 PF00308 Bacterial dnaA protein CDH84_RS09720 PF08299 Bacterial dnaA protein helix-turn-helix CDH84_RS09725 PF02767 DNA polymerase III beta subunit, central domain CDH84_RS09725 PF02768 DNA polymerase III beta subunit, C-terminal domain CDH84_RS09725 PF00712 DNA polymerase III beta subunit, N-terminal domain CDH84_RS09730 PF00781 Diacylglycerol kinase catalytic domain CDH84_RS09745 PF06071 Protein of unknown function (DUF933) CDH84_RS09745 PF01926 50S ribosome-binding GTPase CDH84_RS09750 PF01195 Peptidyl-tRNA hydrolase CDH84_RS09755 PF00271 Helicase conserved C-terminal domain CDH84_RS09755 PF02559 CarD-like/TRCF domain CDH84_RS09755 PF17757 UvrB interaction domain CDH84_RS09755 PF03461 TRCF domain CDH84_RS09755 PF00270 DEAD/DEAH box helicase CDH84_RS09765 PF01479 S4 domain CDH84_RS09785 PF01171 PP-loop family CDH84_RS09790 PF00156 Phosphoribosyl transferase domain CDH84_RS09795 PF06480 FtsH Extracellular CDH84_RS09795 PF17862 AAA+ lid domain CDH84_RS09795 PF01434 Peptidase family M41 CDH84_RS09795 PF00004 ATPase family associated with various cellular activities (AAA) CDH84_RS09975 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CDH84_RS09975 PF14572 Phosphoribosyl synthetase-associated domain CDH84_RS09980 PF00155 Aminotransferase class I and II CDH84_RS09985 PF02565 Recombination protein O C terminal CDH84_RS09985 PF11967 Recombination protein O N terminal CDH84_RS09995 PF02504 Fatty acid synthesis protein CDH84_RS10000 PF00550 Phosphopantetheine attachment site CDH84_RS10005 PF01259 SAICAR synthetase CDH84_RS10010 PF00586 AIR synthase related protein, N-terminal domain CDH84_RS10010 PF02769 AIR synthase related protein, C-terminal domain CDH84_RS10010 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain CDH84_RS10015 PF13537 Glutamine amidotransferase domain CDH84_RS10015 PF00156 Phosphoribosyl transferase domain CDH84_RS10020 PF00586 AIR synthase related protein, N-terminal domain CDH84_RS10020 PF02769 AIR synthase related protein, C-terminal domain CDH84_RS10025 PF00551 Formyl transferase CDH84_RS10035 PF02142 MGS-like domain CDH84_RS10035 PF01808 AICARFT/IMPCHase bienzyme CDH84_RS10040 PF01551 Peptidase family M23 CDH84_RS10040 PF01476 LysM domain CDH84_RS10050 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase CDH84_RS10060 PF00528 Binding-protein-dependent transport system inner membrane component CDH84_RS10065 PF00528 Binding-protein-dependent transport system inner membrane component CDH84_RS10080 PF00701 Dihydrodipicolinate synthetase family CDH84_RS10100 PF02843 Phosphoribosylglycinamide synthetase, C domain CDH84_RS10100 PF02844 Phosphoribosylglycinamide synthetase, N domain CDH84_RS10100 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CDH84_RS10105 PF00731 AIR carboxylase CDH84_RS10110 PF02222 ATP-grasp domain CDH84_RS10110 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain CDH84_RS10120 PF10397 Adenylosuccinate lyase C-terminus CDH84_RS10120 PF00206 Lyase CDH84_RS10140 PF17864 RuvB AAA lid domain CDH84_RS10140 PF05496 Holliday junction DNA helicase RuvB P-loop domain CDH84_RS10140 PF05491 RuvB C-terminal winged helix domain CDH84_RS10145 PF01451 Low molecular weight phosphotyrosine protein phosphatase CDH84_RS10155 PF01757 Acyltransferase family CDH84_RS10160 PF00171 Aldehyde dehydrogenase family CDH84_RS10160 PF00465 Iron-containing alcohol dehydrogenase CDH84_RS10165 PF08240 Alcohol dehydrogenase GroES-like domain CDH84_RS10165 PF00107 Zinc-binding dehydrogenase CDH84_RS10170 PF00291 Pyridoxal-phosphate dependent enzyme CDH84_RS10170 PF14821 Threonine synthase N terminus CDH84_RS10175 PF01554 MatE CDH84_RS10180 PF00338 Ribosomal protein S10p/S20e CDH84_RS10185 PF00297 Ribosomal protein L3 CDH84_RS10190 PF00573 Ribosomal protein L4/L1 family CDH84_RS10195 PF00276 Ribosomal protein L23 CDH84_RS10200 PF03947 Ribosomal Proteins L2, C-terminal domain CDH84_RS10200 PF00181 Ribosomal Proteins L2, RNA binding domain CDH84_RS10205 PF00203 Ribosomal protein S19 CDH84_RS10210 PF00237 Ribosomal protein L22p/L17e CDH84_RS10215 PF07650 KH domain CDH84_RS10215 PF00189 Ribosomal protein S3, C-terminal domain CDH84_RS10220 PF00252 Ribosomal protein L16p/L10e CDH84_RS10225 PF00831 Ribosomal L29 protein CDH84_RS10230 PF00366 Ribosomal protein S17 CDH84_RS10235 PF00238 Ribosomal protein L14p/L23e CDH84_RS10240 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 CDH84_RS10240 PF00467 KOW motif CDH84_RS10245 PF00673 ribosomal L5P family C-terminus CDH84_RS10245 PF00281 Ribosomal protein L5 CDH84_RS10250 PF00253 Ribosomal protein S14p/S29e CDH84_RS10255 PF00410 Ribosomal protein S8 CDH84_RS10260 PF00347 Ribosomal protein L6 CDH84_RS10265 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast CDH84_RS10270 PF00333 Ribosomal protein S5, N-terminal domain CDH84_RS10270 PF03719 Ribosomal protein S5, C-terminal domain CDH84_RS10275 PF00327 Ribosomal protein L30p/L7e CDH84_RS10280 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A CDH84_RS10285 PF00344 SecY translocase CDH84_RS10295 PF01176 Translation initiation factor 1A / IF-1 CDH84_RS10300 PF00444 Ribosomal protein L36 CDH84_RS10305 PF00416 Ribosomal protein S13/S18 CDH84_RS10310 PF00411 Ribosomal protein S11 CDH84_RS10315 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain CDH84_RS10315 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain CDH84_RS10315 PF01000 RNA polymerase Rpb3/RpoA insert domain CDH84_RS10320 PF01196 Ribosomal protein L17 CDH84_RS10425 PF00589 Phage integrase family CDH84_RS10425 PF14659 Phage integrase, N-terminal SAM-like domain CDH84_RS10450 PF01381 Helix-turn-helix CDH84_RS10495 PF11208 Protein of unknown function (DUF2992) CDH84_RS10510 PF02557 D-alanyl-D-alanine carboxypeptidase CDH84_RS10515 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase CDH84_RS10515 PF13457 GW (Gly-Tryp) dipeptide domain CDH84_RS10520 PF01628 HrcA protein C terminal domain CDH84_RS10520 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding CDH84_RS10525 PF01025 GrpE CDH84_RS10530 PF00012 Hsp70 protein CDH84_RS10535 PF00684 DnaJ central domain CDH84_RS10535 PF00226 DnaJ domain CDH84_RS10535 PF01556 DnaJ C terminal domain CDH84_RS10540 PF00155 Aminotransferase class I and II CDH84_RS10540 PF00392 Bacterial regulatory proteins, gntR family CDH84_RS10545 PF01416 tRNA pseudouridine synthase CDH84_RS10550 PF08543 Phosphomethylpyrimidine kinase CDH84_RS10555 PF07155 ECF-type riboflavin transporter, S component CDH84_RS10560 PF04260 Protein of unknown function (DUF436) CDH84_RS10565 PF00924 Mechanosensitive ion channel CDH84_RS10570 PF05697 Bacterial trigger factor protein (TF) CDH84_RS10570 PF05698 Bacterial trigger factor protein (TF) C-terminus CDH84_RS10570 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CDH84_RS10575 PF05066 HB1, ASXL, restriction endonuclease HTH domain CDH84_RS10580 PF06418 CTP synthase N-terminus CDH84_RS10580 PF00117 Glutamine amidotransferase class-I CDH84_RS10595 PF00692 dUTPase CDH84_RS10600 PF18073 Rubredoxin metal binding domain CDH84_RS10605 PF00484 Carbonic anhydrase CDH84_RS10610 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CDH84_RS10610 PF07992 Pyridine nucleotide-disulphide oxidoreductase CDH84_RS10620 PF00749 tRNA synthetases class I (E and Q), catalytic domain CDH84_RS10625 PF13407 Periplasmic binding protein domain CDH84_RS10630 PF02653 Branched-chain amino acid transport system / permease component CDH84_RS10635 PF00005 ABC transporter CDH84_RS10640 PF05025 RbsD / FucU transport protein family CDH84_RS10645 PF00294 pfkB family carbohydrate kinase CDH84_RS10650 PF00356 Bacterial regulatory proteins, lacI family CDH84_RS10660 PF02687 FtsX-like permease family CDH84_RS10665 PF00005 ABC transporter CDH84_RS10670 PF00072 Response regulator receiver domain CDH84_RS10670 PF00486 Transcriptional regulatory protein, C terminal CDH84_RS10675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDH84_RS10675 PF00512 His Kinase A (phospho-acceptor) domain CDH84_RS10680 PF00764 Arginosuccinate synthase CDH84_RS10685 PF00206 Lyase CDH84_RS10685 PF14698 Argininosuccinate lyase C-terminal CDH84_RS10690 PF01116 Fructose-bisphosphate aldolase class-II CDH84_RS10695 PF00056 lactate/malate dehydrogenase, NAD binding domain CDH84_RS10695 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CDH84_RS10700 PF00830 Ribosomal L28 family CDH84_RS10705 PF03780 Asp23 family, cell envelope-related function CDH84_RS10710 PF02734 DAK2 domain CDH84_RS10710 PF13684 Dihydroxyacetone kinase family CDH84_RS10725 PF13936 Helix-turn-helix domain CDH84_RS10735 PF04650 YSIRK type signal peptide CDH84_RS10735 PF05062 RICH domain CDH84_RS10735 PF00746 LPXTG cell wall anchor motif CDH84_RS10735 PF16828 GAG-binding domain on surface antigen CDH84_RS10740 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family CDH84_RS10750 PF00072 Response regulator receiver domain CDH84_RS10750 PF00486 Transcriptional regulatory protein, C terminal CDH84_RS10760 PF00005 ABC transporter CDH84_RS10765 PF00528 Binding-protein-dependent transport system inner membrane component CDH84_RS10775 PF02673 Bacitracin resistance protein BacA CDH84_RS10780 PF05389 Negative regulator of genetic competence (MecA) CDH84_RS10785 PF00953 Glycosyl transferase family 4 CDH84_RS10790 PF00005 ABC transporter CDH84_RS10795 PF01458 Uncharacterized protein family (UPF0051) CDH84_RS10800 PF00266 Aminotransferase class-V CDH84_RS10805 PF01592 NifU-like N terminal domain CDH84_RS10810 PF01458 Uncharacterized protein family (UPF0051) CDH84_RS10815 PF00768 D-alanyl-D-alanine carboxypeptidase CDH84_RS10815 PF07943 Penicillin-binding protein 5, C-terminal domain CDH84_RS10820 PF07943 Penicillin-binding protein 5, C-terminal domain CDH84_RS10820 PF00768 D-alanyl-D-alanine carboxypeptidase CDH84_RS10825 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CDH84_RS10830 PF00528 Binding-protein-dependent transport system inner membrane component CDH84_RS10835 PF12911 N-terminal TM domain of oligopeptide transport permease C CDH84_RS10835 PF00528 Binding-protein-dependent transport system inner membrane component CDH84_RS10840 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CDH84_RS10840 PF00005 ABC transporter CDH84_RS10845 PF00005 ABC transporter CDH84_RS10845 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CDH84_RS10950 PF14659 Phage integrase, N-terminal SAM-like domain CDH84_RS10950 PF00589 Phage integrase family CDH84_RS10975 PF01381 Helix-turn-helix