locus-tag	class	description
CDH84_RS00025	COG1121	(ABC) transporter
CDH84_RS00030	COG1108	ABC-type Mn2 Zn2 transport systems permease components
CDH84_RS00045	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
CDH84_RS00045	COG4499	WXG100 protein secretion system (Wss), protein YukC
CDH84_RS00070	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
CDH84_RS00075	COG1459	type II secretion system
CDH84_RS00135	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
CDH84_RS00140	COG1363	Peptidase, m42
CDH84_RS00155	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
CDH84_RS00160	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
CDH84_RS00175	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
CDH84_RS00195	COG1346	cytolysis
CDH84_RS00210	COG0601	transmembrane transport
CDH84_RS00215	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CDH84_RS00220	COG1122	ATPase activity
CDH84_RS00230	COG1263	PTS System
CDH84_RS00230	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CDH84_RS00235	COG0366	Alpha amylase catalytic
CDH84_RS00240	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
CDH84_RS00255	COG3959	Transketolase, thiamine diphosphate binding domain
CDH84_RS00265	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
CDH84_RS00285	COG1045	serine acetyltransferase
CDH84_RS00300	COG1939	Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
CDH84_RS00330	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
CDH84_RS00345	COG4974	Belongs to the 'phage' integrase family
CDH84_RS00455	COG1396	sequence-specific DNA binding
CDH84_RS00460	COG2814	Major facilitator Superfamily
CDH84_RS00470	COG1732	Glycine betaine
CDH84_RS00610	COG0519	Catalyzes the synthesis of GMP from XMP
CDH84_RS00655	COG1695	Transcriptional regulator
CDH84_RS00670	COG1755	Isoprenylcysteine carboxyl methyltransferase
CDH84_RS00710	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
CDH84_RS00715	COG0446	pyridine nucleotide-disulphide oxidoreductase
CDH84_RS00735	COG1131	(ABC) transporter
CDH84_RS00745	COG1263	PTS System
CDH84_RS00745	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CDH84_RS00745	COG2190	(PTS) system
CDH84_RS00750	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
CDH84_RS00770	COG0768	penicillin binding
CDH84_RS00780	COG0513	Belongs to the DEAD box helicase family
CDH84_RS00795	COG1126	abc transporter atp-binding protein
CDH84_RS00805	COG0492	ferredoxin-NADP+ reductase activity
CDH84_RS00810	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
CDH84_RS00820	COG3579	cysteine-type endopeptidase activity
CDH84_RS00825	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
CDH84_RS00855	COG0116	Belongs to the methyltransferase superfamily
CDH84_RS00865	COG1854	S-ribosylhomocysteine lyase activity
CDH84_RS00870	COG4372	Transposase
CDH84_RS00870	COG1418	mRNA catabolic process
CDH84_RS00880	COG1131	(ABC) transporter
CDH84_RS00890	COG4585	Histidine kinase
CDH84_RS00895	COG2197	response regulator
CDH84_RS00905	COG0194	GDP metabolic process
CDH84_RS00915	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
CDH84_RS00920	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
CDH84_RS00925	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
CDH84_RS00925	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
CDH84_RS00935	COG0515	serine threonine protein kinase
CDH84_RS00935	COG2815	serine threonine protein kinase
CDH84_RS00945	COG4585	Histidine kinase
CDH84_RS00950	COG2197	response regulator
CDH84_RS00960	COG1098	S1 RNA binding domain
CDH84_RS00965	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
CDH84_RS00970	COG1349	DNA-binding transcription factor activity
CDH84_RS00980	COG1447	Phosphotransferase system cellobiose-specific component IIA
CDH84_RS00990	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
CDH84_RS00995	COG1882	Formate acetyltransferase
CDH84_RS01015	COG1739	Uncharacterized protein family UPF0029
CDH84_RS01020	COG4098	Superfamily II DNA RNA helicase required for DNA uptake (late competence protein)
CDH84_RS01025	COG1040	competence protein
CDH84_RS01060	COG0527	aspartate kinase activity
CDH84_RS01065	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
CDH84_RS01075	COG1024	Enoyl-CoA hydratase
CDH84_RS01085	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
CDH84_RS01095	COG2070	2-Nitropropane dioxygenase
CDH84_RS01100	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
CDH84_RS01105	COG1028	Short-chain dehydrogenase reductase Sdr
CDH84_RS01110	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
CDH84_RS01125	COG0439	Biotin carboxylase
CDH84_RS01145	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
CDH84_RS01160	COG3716	PTS system mannose fructose sorbose family IID component
CDH84_RS01165	COG3715	PTS system
CDH84_RS01180	COG0561	phosphatase activity
CDH84_RS01195	COG2252	PERMEase
CDH84_RS01200	COG0802	atpase or kinase
CDH84_RS01210	COG1316	TRANSCRIPTIONal
CDH84_RS01220	COG0537	adenosine 5'-monophosphoramidase activity
CDH84_RS01235	COG1131	(ABC) transporter
CDH84_RS01240	COG4473	ABC transporter
CDH84_RS01250	COG0220	tRNA (guanine-N7-)-methyltransferase activity
CDH84_RS01265	COG0195	Participates in both transcription termination and antitermination
CDH84_RS01270	COG2740	Nucleic-acid-binding protein implicated in transcription termination
CDH84_RS01280	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
CDH84_RS01285	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
CDH84_RS01310	COG2860	membrane
CDH84_RS01320	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
CDH84_RS01320	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
CDH84_RS01325	COG1832	CoA-binding protein
CDH84_RS01345	COG5002	protein histidine kinase activity
CDH84_RS01365	COG1268	BioY protein
CDH84_RS01370	COG1234	tRNA 3'-trailer cleavage
CDH84_RS01385	COG0166	Belongs to the GPI family
CDH84_RS01390	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
CDH84_RS01395	COG0705	Rhomboid family
CDH84_RS01395	COG0457	Tetratricopeptide repeat
CDH84_RS01400	COG1744	ABC transporter substrate-binding protein PnrA-like
CDH84_RS01405	COG1210	Utp--glucose-1-phosphate uridylyltransferase
CDH84_RS01420	COG0706	membrane insertase activity
CDH84_RS01480	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
CDH84_RS01490	COG2153	protein acetylation
CDH84_RS01500	COG1216	Glycosyl transferase, family 2
CDH84_RS01500	COG1442	glycosyl transferase family 8
CDH84_RS01545	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
CDH84_RS01555	COG0789	Transcriptional regulator
CDH84_RS01565	COG0656	L-ascorbic acid biosynthetic process
CDH84_RS01610	COG2226	methyltransferase
CDH84_RS01620	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
CDH84_RS01625	COG3414	Phosphotransferase system galactitol-specific IIB component
CDH84_RS01630	COG3775	system Galactitol-specific IIC component
CDH84_RS01635	COG0235	Class ii aldolase
CDH84_RS01645	COG3775	system Galactitol-specific IIC component
CDH84_RS01650	COG3414	Phosphotransferase system galactitol-specific IIB component
CDH84_RS01655	COG2207	Transcriptional regulator
CDH84_RS01665	COG1175	transmembrane transport
CDH84_RS01670	COG0395	ABC-type sugar transport system, permease component
CDH84_RS01690	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
CDH84_RS01695	COG2017	converts alpha-aldose to the beta-anomer
CDH84_RS01765	COG1518	maintenance of DNA repeat elements
CDH84_RS01770	COG1343	CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
CDH84_RS01775	COG0673	inositol 2-dehydrogenase activity
CDH84_RS01785	COG2315	Protein conserved in bacteria
CDH84_RS01800	COG0742	ribosomal rna small subunit methyltransferase
CDH84_RS01815	COG3480	Lon protease (S16) C-terminal proteolytic domain
CDH84_RS01820	COG0737	Belongs to the 5'-nucleotidase family
CDH84_RS01825	COG4470	Protein conserved in bacteria
CDH84_RS01840	COG1132	(ABC) transporter
CDH84_RS01845	COG1132	(ABC) transporter
CDH84_RS01850	COG0512	Glutamine amidotransferase of anthranilate synthase
CDH84_RS01855	COG1268	BioY protein
CDH84_RS01860	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
CDH84_RS01880	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
CDH84_RS01895	COG1940	carbohydrate kinase activity
CDH84_RS01900	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
CDH84_RS01905	COG1217	gtp-binding protein TYPA
CDH84_RS01915	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
CDH84_RS01940	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
CDH84_RS01950	COG0762	integral membrane protein
CDH84_RS01955	COG2302	S4 RNA-binding domain
CDH84_RS01960	COG3599	regulation of cell shape
CDH84_RS01975	COG0494	nUDIX hydrolase
CDH84_RS01980	COG0542	response to heat
CDH84_RS01990	COG4703	Protein of unknown function (DUF1797)
CDH84_RS01995	COG0765	amino acid transport
CDH84_RS02000	COG1126	abc transporter atp-binding protein
CDH84_RS02005	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
CDH84_RS02015	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
CDH84_RS02020	COG1570	exodeoxyribonuclease VII activity
CDH84_RS02025	COG1722	exodeoxyribonuclease VII activity
CDH84_RS02035	COG1189	Ribosomal RNA methyltransferase RrmJ FtsJ
CDH84_RS02040	COG1438	arginine binding
CDH84_RS02045	COG0497	DNA recombination
CDH84_RS02050	COG1307	EDD domain protein, DegV family
CDH84_RS02055	COG2755	lipolytic protein G-D-S-L family
CDH84_RS02100	COG1078	dGTPase activity
CDH84_RS02125	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
CDH84_RS02135	COG2884	Cell division ATP-binding protein ftsE
CDH84_RS02140	COG2177	Part of the ABC transporter FtsEX involved in
CDH84_RS02165	COG0436	Aminotransferase
CDH84_RS02170	COG0017	Asparaginyl-tRNA synthetase
CDH84_RS02195	COG1660	Displays ATPase and GTPase activities
CDH84_RS02220	COG0254	rRNA binding
CDH84_RS02225	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
CDH84_RS02230	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
CDH84_RS02235	COG0716	FMN binding
CDH84_RS02240	COG1605	Chorismate mutase
CDH84_RS02240	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
CDH84_RS02245	COG0038	chloride channel
CDH84_RS02250	COG0335	large ribosomal subunit rRNA binding
CDH84_RS02300	COG1136	(ABC) transporter
CDH84_RS02315	COG5002	protein histidine kinase activity
CDH84_RS02335	COG0772	Belongs to the SEDS family
CDH84_RS02355	COG0560	Phosphoserine phosphatase
CDH84_RS02380	COG0148	phosphopyruvate hydratase activity
CDH84_RS02400	COG1316	TRANSCRIPTIONal
CDH84_RS02415	COG3700	Belongs to the class B bacterial acid phosphatase family
CDH84_RS02520	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
CDH84_RS02530	COG4555	ABC transporter
CDH84_RS02560	COG1028	Short-chain dehydrogenase reductase Sdr
CDH84_RS02565	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
CDH84_RS02570	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
CDH84_RS02590	COG0404	The glycine cleavage system catalyzes the degradation of glycine
CDH84_RS02595	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
CDH84_RS02615	COG3087	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
CDH84_RS02615	COG3064	Membrane
CDH84_RS02630	COG3590	peptidase
CDH84_RS02685	COG1136	(ABC) transporter
CDH84_RS02700	COG0586	Pfam SNARE associated Golgi protein
CDH84_RS02705	COG4619	ABC transporter
CDH84_RS02710	COG0390	transport system, permease component
CDH84_RS02720	COG0583	DNA-binding transcription factor activity
CDH84_RS02735	COG2211	Major facilitator Superfamily
CDH84_RS02745	COG3250	beta-galactosidase activity
CDH84_RS02750	COG2186	Transcriptional regulator
CDH84_RS02760	COG0800	Aldolase
CDH84_RS02775	COG1028	Short-chain dehydrogenase reductase Sdr
CDH84_RS02795	COG1609	Transcriptional regulator
CDH84_RS02810	COG0438	transferase activity, transferring glycosyl groups
CDH84_RS02835	COG0765	amino acid transport
CDH84_RS02840	COG0765	amino acid transport
CDH84_RS02845	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CDH84_RS02850	COG1126	abc transporter atp-binding protein
CDH84_RS02855	COG0745	RESPONSE REGULATOR receiver
CDH84_RS02860	COG5002	protein histidine kinase activity
CDH84_RS02865	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
CDH84_RS02870	COG2832	Protein of unknown function (DUF454)
CDH84_RS02880	COG1196	nuclear chromosome segregation
CDH84_RS02885	COG0561	phosphatase activity
CDH84_RS02890	COG0561	phosphatase activity
CDH84_RS02895	COG0552	protein localization to endoplasmic reticulum
CDH84_RS02900	COG3689	TIGRFAM TIGR03943 family protein
CDH84_RS02905	COG0701	Predicted permease
CDH84_RS02920	COG2183	response to ionizing radiation
CDH84_RS02925	COG3091	SprT-like family
CDH84_RS02930	COG1983	PspC domain protein
CDH84_RS02970	COG0826	peptidase U32
CDH84_RS02975	COG4443	Transcriptional Coactivator p15 (PC4)
CDH84_RS02985	COG1914	H( )-stimulated, divalent metal cation uptake system
CDH84_RS03000	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
CDH84_RS03000	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
CDH84_RS03025	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
CDH84_RS03050	COG1164	Oligoendopeptidase f
CDH84_RS03060	COG5433	transposase activity
CDH84_RS03065	COG0772	Belongs to the SEDS family
CDH84_RS03085	COG0768	penicillin binding
CDH84_RS03100	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
CDH84_RS03105	COG2223	nitrite transmembrane transporter activity
CDH84_RS03130	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
CDH84_RS03135	COG2011	ABC-type metal ion transport system permease component
CDH84_RS03140	COG1464	Belongs to the NlpA lipoprotein family
CDH84_RS03145	COG0513	Belongs to the DEAD box helicase family
CDH84_RS03155	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
CDH84_RS03160	COG0204	Acyl-transferase
CDH84_RS03165	COG1555	photosystem II stabilization
CDH84_RS03165	COG1596	polysaccharide export
CDH84_RS03170	COG0658	competence protein
CDH84_RS03170	COG2333	competence protein COMEC
CDH84_RS03175	COG0561	phosphatase activity
CDH84_RS03180	COG1609	Transcriptional regulator
CDH84_RS03185	COG0657	acetylesterase activity
CDH84_RS03190	COG2226	methyltransferase
CDH84_RS03200	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
CDH84_RS03205	COG5433	transposase activity
CDH84_RS03210	COG3711	transcriptional antiterminator
CDH84_RS03215	COG2190	(PTS) system
CDH84_RS03215	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CDH84_RS03215	COG1263	PTS System
CDH84_RS03225	COG3835	regulator
CDH84_RS03230	COG1929	Belongs to the glycerate kinase type-1 family
CDH84_RS03235	COG2610	gluconate transmembrane transporter activity
CDH84_RS03245	COG1846	Transcriptional regulator
CDH84_RS03260	COG0363	glucosamine-6-phosphate deaminase activity
CDH84_RS03265	COG0435	Glutathione S-transferase
CDH84_RS03270	COG1187	pseudouridine synthase activity
CDH84_RS03295	COG5433	transposase activity
CDH84_RS03310	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
CDH84_RS03315	COG4122	O-methyltransferase activity
CDH84_RS03325	COG4894	glucomannan catabolic process
CDH84_RS03340	COG1442	glycosyl transferase family 8
CDH84_RS03350	COG1476	TRANSCRIPTIONal
CDH84_RS03365	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
CDH84_RS03370	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
CDH84_RS03375	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
CDH84_RS03390	COG1012	belongs to the aldehyde dehydrogenase family
CDH84_RS03395	COG0726	polysaccharide deacetylase
CDH84_RS03410	COG1956	GAF domain-containing protein
CDH84_RS03415	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
CDH84_RS03425	COG1654	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon
CDH84_RS03425	COG0340	biotin-[acetyl-CoA-carboxylase] ligase activity
CDH84_RS03455	COG4721	ABC-type cobalt transport system, permease component
CDH84_RS03460	COG1122	ATPase activity
CDH84_RS03470	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
CDH84_RS03500	COG4109	DRTGG domain
CDH84_RS03505	COG0024	Methionine aminopeptidase
CDH84_RS03515	COG2246	polysaccharide biosynthetic process
CDH84_RS03520	COG4708	membrane
CDH84_RS03530	COG1597	lipid kinase activity
CDH84_RS03535	COG1523	belongs to the glycosyl hydrolase 13 family
CDH84_RS03550	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
CDH84_RS03635	COG2321	neutral zinc metallopeptidase
CDH84_RS03660	COG0488	(ABC) transporter
CDH84_RS03665	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
CDH84_RS03670	COG0022	dehydrogenase e1 component
CDH84_RS03670	COG0508	dehydrogenase complex catalyzes the overall conversion of
CDH84_RS03675	COG0508	dehydrogenase complex catalyzes the overall conversion of
CDH84_RS03685	COG0095	Lipoate-protein ligase
CDH84_RS03690	COG3442	glutamine amidotransferase
CDH84_RS03695	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
CDH84_RS03700	COG1624	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
CDH84_RS03725	COG0635	Involved in the biosynthesis of porphyrin-containing compound
CDH84_RS03735	COG0647	UMP catabolic process
CDH84_RS03745	COG3513	CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). In type II CRISPR systems correct processing of pre-crRNA requires a trans-encoded small RNA (tracrRNA), endogenous ribonuclease 3 (rnc) and this protein. The tracrRNA serves as a guide for ribonuclease 3-aided processing of pre-crRNA. Subsequently Cas9 crRNA tracrRNA endonucleolytically cleaves linear or circular dsDNA target complementary to the spacer
CDH84_RS03750	COG1518	maintenance of DNA repeat elements
CDH84_RS03755	COG3512	CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
CDH84_RS03775	COG0481	GTPase activity
CDH84_RS03785	COG1418	mRNA catabolic process
CDH84_RS03790	COG0456	acetyltransferase
CDH84_RS03800	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
CDH84_RS03830	COG1131	(ABC) transporter
CDH84_RS03835	COG1725	Transcriptional regulator
CDH84_RS03845	COG0205	6-phosphofructokinase activity
CDH84_RS03850	COG0469	pyruvate kinase activity
CDH84_RS03855	COG5433	transposase activity
CDH84_RS03870	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
CDH84_RS03875	COG2824	Alkylphosphonate utilization operon protein PhnA
CDH84_RS03880	COG0765	amino acid transport
CDH84_RS03885	COG1126	abc transporter atp-binding protein
CDH84_RS03900	COG1072	(Pantothenic acid kinase))
CDH84_RS03905	COG2813	Specifically methylates the guanine in position
CDH84_RS03915	COG1744	ABC transporter substrate-binding protein PnrA-like
CDH84_RS03920	COG3845	ABC transporter
CDH84_RS03925	COG4603	Belongs to the binding-protein-dependent transport system permease family
CDH84_RS03930	COG1079	Belongs to the binding-protein-dependent transport system permease family
CDH84_RS03950	COG3764	Sortase (surface protein transpeptidase)
CDH84_RS03955	COG0346	lactoylglutathione lyase activity
CDH84_RS03980	COG2188	Transcriptional regulator
CDH84_RS03995	COG1464	Belongs to the NlpA lipoprotein family
CDH84_RS04010	COG1136	(ABC) transporter
CDH84_RS04020	COG0745	RESPONSE REGULATOR receiver
CDH84_RS04025	COG5002	protein histidine kinase activity
CDH84_RS04030	COG4974	Belongs to the 'phage' integrase family
CDH84_RS04035	COG4166	transmembrane transport
CDH84_RS04050	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
CDH84_RS04055	COG2739	Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
CDH84_RS04060	COG5002	protein histidine kinase activity
CDH84_RS04065	COG0745	RESPONSE REGULATOR receiver
CDH84_RS04075	COG0704	Plays a role in the regulation of phosphate uptake
CDH84_RS04080	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
CDH84_RS04085	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
CDH84_RS04090	COG0581	inorganic phosphate transmembrane transporter activity
CDH84_RS04095	COG0573	inorganic phosphate transmembrane transporter activity
CDH84_RS04105	COG3270	Specifically methylates the cytosine at position 1407 (m5C1407) of 16S rRNA
CDH84_RS04105	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
CDH84_RS04110	COG0483	inositol monophosphate 1-phosphatase activity
CDH84_RS04125	COG0196	riboflavin kinase activity
CDH84_RS04130	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
CDH84_RS04160	COG1136	(ABC) transporter
CDH84_RS04165	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
CDH84_RS04170	COG0758	DNA mediated transformation
CDH84_RS04175	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
CDH84_RS04180	COG4604	ABC transporter, ATP-binding protein
CDH84_RS04185	COG4605	iron ion homeostasis
CDH84_RS04190	COG4606	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CDH84_RS04195	COG0110	maltose O-acetyltransferase activity
CDH84_RS04205	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
CDH84_RS04210	COG1376	ErfK ybiS ycfS ynhG family protein
CDH84_RS04215	COG1966	Carbon starvation protein
CDH84_RS04220	COG3279	Response regulator of the LytR AlgR family
CDH84_RS04225	COG3275	phosphorelay sensor kinase activity
CDH84_RS04325	COG0505	Belongs to the CarA family
CDH84_RS04335	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
CDH84_RS04355	COG0488	(ABC) transporter
CDH84_RS04365	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
CDH84_RS04380	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
CDH84_RS04420	COG0095	Lipoate-protein ligase
CDH84_RS04430	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
CDH84_RS04435	COG4684	Psort location CytoplasmicMembrane, score
CDH84_RS04440	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
CDH84_RS04450	COG1132	(ABC) transporter
CDH84_RS04480	COG2890	protein-(glutamine-N5) methyltransferase activity
CDH84_RS04495	COG1942	4-Oxalocrotonate Tautomerase
CDH84_RS04515	COG0431	NADPH-dependent FMN reductase
CDH84_RS04515	COG3976	FMN-binding domain protein
CDH84_RS04515	COG1053	succinate dehydrogenase
CDH84_RS04525	COG2233	PERMEase
CDH84_RS04540	COG0477	Major facilitator Superfamily
CDH84_RS04555	COG4221	oxidoreductase activity
CDH84_RS04560	COG0280	phosphate acetyltransferase
CDH84_RS04565	COG0564	pseudouridine synthase activity
CDH84_RS04575	COG2357	RelA SpoT domain protein
CDH84_RS04590	COG1104	cysteine desulfurase activity
CDH84_RS04600	COG2344	Modulates transcription in response to changes in cellular NADH NAD( ) redox state
CDH84_RS04605	COG2003	Belongs to the UPF0758 family
CDH84_RS04610	COG0628	permease
CDH84_RS04615	COG2723	6-phospho-beta-galactosidase activity
CDH84_RS04625	COG0561	phosphatase activity
CDH84_RS04640	COG0038	chloride channel
CDH84_RS04650	COG1177	transmembrane transport
CDH84_RS04655	COG1176	ABC-type spermidine putrescine transport system, permease component I
CDH84_RS04665	COG0812	UDP-N-acetylmuramate dehydrogenase activity
CDH84_RS04670	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
CDH84_RS04685	COG0302	gtp cyclohydrolase
CDH84_RS04690	COG0285	dihydrofolate synthase activity
CDH84_RS04695	COG2962	Rard protein
CDH84_RS04710	COG0726	polysaccharide deacetylase
CDH84_RS04725	COG1012	belongs to the aldehyde dehydrogenase family
CDH84_RS04755	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
CDH84_RS04800	COG2261	transglycosylase associated protein
CDH84_RS04825	COG1115	amino acid carrier protein
CDH84_RS04830	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
CDH84_RS04840	COG1346	cytolysis
CDH84_RS04875	COG4974	Belongs to the 'phage' integrase family
CDH84_RS04885	COG0539	negative regulation of cytoplasmic translation
CDH84_RS04905	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
CDH84_RS04915	COG0187	DNA topoisomerase II activity
CDH84_RS04920	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
CDH84_RS04925	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
CDH84_RS04935	COG1083	cytidylyl-transferase
CDH84_RS04935	COG2755	lipolytic protein G-D-S-L family
CDH84_RS04950	COG2089	acid synthase
CDH84_RS04975	COG1442	glycosyl transferase family 8
CDH84_RS04975	COG1216	Glycosyl transferase, family 2
CDH84_RS04980	COG1442	glycosyl transferase family 8
CDH84_RS04980	COG1216	Glycosyl transferase, family 2
CDH84_RS04995	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
CDH84_RS05020	COG1316	TRANSCRIPTIONal
CDH84_RS05045	COG0005	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
CDH84_RS05060	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
CDH84_RS05080	COG3842	ATPase activity
CDH84_RS05095	COG1293	RNA-binding protein homologous to eukaryotic snRNP
CDH84_RS05100	COG3527	Alpha-acetolactate decarboxylase
CDH84_RS05105	COG0028	Belongs to the TPP enzyme family
CDH84_RS05110	COG0457	Tetratricopeptide repeat
CDH84_RS05115	COG0628	permease
CDH84_RS05125	COG1051	belongs to the nudix hydrolase family
CDH84_RS05130	COG5492	domain, Protein
CDH84_RS05135	COG1088	dTDP-glucose 4,6-dehydratase activity
CDH84_RS05145	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
CDH84_RS05150	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CDH84_RS05160	COG2384	SAM-dependent methyltransferase
CDH84_RS05185	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
CDH84_RS05185	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
CDH84_RS05190	COG0300	oxidoreductase activity
CDH84_RS05205	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
CDH84_RS05235	COG1573	uracil-dna glycosylase
CDH84_RS05240	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
CDH84_RS05250	COG0584	glycerophosphoryl diester phosphodiesterase
CDH84_RS05255	COG0322	excinuclease ABC activity
CDH84_RS05265	COG0534	Mate efflux family protein
CDH84_RS05305	COG0803	Belongs to the bacterial solute-binding protein 9 family
CDH84_RS05310	COG5433	transposase activity
CDH84_RS05330	COG2176	DNA-directed DNA polymerase activity
CDH84_RS05390	COG0791	NLP P60 protein
CDH84_RS05390	COG0741	lytic transglycosylase activity
CDH84_RS05420	COG2946	Replication initiation factor
CDH84_RS05430	COG1674	ftsk spoiiie
CDH84_RS05455	COG4974	Belongs to the 'phage' integrase family
CDH84_RS05485	COG1674	ftsk spoiiie
CDH84_RS05575	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
CDH84_RS05585	COG3425	synthase
CDH84_RS05600	COG1272	protein, Hemolysin III
CDH84_RS05645	COG0745	RESPONSE REGULATOR receiver
CDH84_RS05650	COG2357	RelA SpoT domain protein
CDH84_RS05655	COG1132	(ABC) transporter
CDH84_RS05670	COG0737	Belongs to the 5'-nucleotidase family
CDH84_RS05675	COG0242	peptide deformylase activity
CDH84_RS05680	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
CDH84_RS05690	COG1132	(ABC) transporter
CDH84_RS05705	COG0488	(ABC) transporter
CDH84_RS05735	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
CDH84_RS05735	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
CDH84_RS05735	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
CDH84_RS05740	COG1105	Belongs to the carbohydrate kinase PfkB family
CDH84_RS05745	COG1349	DNA-binding transcription factor activity
CDH84_RS05750	COG1388	LysM domain
CDH84_RS05750	COG1705	Flagellar rod assembly protein muramidase FlgJ
CDH84_RS05800	COG1837	Belongs to the UPF0109 family
CDH84_RS05805	COG0228	four-way junction DNA binding
CDH84_RS05810	COG0577	efflux transmembrane transporter activity
CDH84_RS05815	COG1136	(ABC) transporter
CDH84_RS05820	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CDH84_RS05830	COG0505	Belongs to the CarA family
CDH84_RS05840	COG0564	pseudouridine synthase activity
CDH84_RS05850	COG0583	DNA-binding transcription factor activity
CDH84_RS05855	COG0211	Belongs to the bacterial ribosomal protein bL27 family
CDH84_RS05880	COG1104	cysteine desulfurase activity
CDH84_RS05890	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
CDH84_RS05895	COG3679	Belongs to the UPF0342 family
CDH84_RS05900	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
CDH84_RS05915	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
CDH84_RS05920	COG1368	sulfuric ester hydrolase activity
CDH84_RS05925	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
CDH84_RS05935	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
CDH84_RS05940	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
CDH84_RS05965	COG2244	polysaccharide biosynthetic process
CDH84_RS05975	COG1120	ATPase activity
CDH84_RS05980	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
CDH84_RS05985	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CDH84_RS05990	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CDH84_RS06005	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
CDH84_RS06010	COG1253	flavin adenine dinucleotide binding
CDH84_RS06015	COG2519	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
CDH84_RS06020	COG1242	4 iron, 4 sulfur cluster binding
CDH84_RS06025	COG0671	phosphoesterase, PA-phosphatase related
CDH84_RS06030	COG3601	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
CDH84_RS06065	COG0297	glycogen (starch) synthase activity
CDH84_RS06105	COG3475	LICD family
CDH84_RS06120	COG0463	Glycosyl transferase, family 2
CDH84_RS06125	COG1215	transferase activity, transferring glycosyl groups
CDH84_RS06135	COG1091	dTDP-4-dehydrorhamnose reductase activity
CDH84_RS06140	COG2151	metal-sulfur cluster biosynthetic enzyme
CDH84_RS06145	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
CDH84_RS06150	COG0358	DNA primase activity
CDH84_RS06155	COG1970	mechanosensitive ion channel activity
CDH84_RS06170	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CDH84_RS06175	COG0004	ammonium transporteR
CDH84_RS06185	COG1054	Belongs to the UPF0176 family
CDH84_RS06195	COG2271	Major facilitator Superfamily
CDH84_RS06205	COG0058	SHG alpha-glucan phosphorylase activity
CDH84_RS06210	COG1640	4-alpha-glucanotransferase
CDH84_RS06215	COG1609	Transcriptional regulator
CDH84_RS06225	COG1175	transmembrane transport
CDH84_RS06230	COG3833	ABC-type maltose transport systems, permease component
CDH84_RS06235	COG3104	oligopeptide transport
CDH84_RS06255	COG0438	transferase activity, transferring glycosyl groups
CDH84_RS06280	COG0201	protein transport
CDH84_RS06285	COG1442	glycosyl transferase family 8
CDH84_RS06290	COG1216	Glycosyl transferase, family 2
CDH84_RS06290	COG1442	glycosyl transferase family 8
CDH84_RS06295	COG1442	glycosyl transferase family 8
CDH84_RS06300	COG1216	Glycosyl transferase, family 2
CDH84_RS06300	COG1442	glycosyl transferase family 8
CDH84_RS06305	COG1442	glycosyl transferase family 8
CDH84_RS06350	COG0765	amino acid transport
CDH84_RS06355	COG1126	abc transporter atp-binding protein
CDH84_RS06380	COG2309	aminopeptidase activity
CDH84_RS06390	COG0154	amidase activity
CDH84_RS06395	COG1187	pseudouridine synthase activity
CDH84_RS06400	COG0656	L-ascorbic acid biosynthetic process
CDH84_RS06405	COG0778	Nitroreductase
CDH84_RS06410	COG0346	lactoylglutathione lyase activity
CDH84_RS06415	COG0463	Glycosyl transferase, family 2
CDH84_RS06420	COG1113	amino acid transport
CDH84_RS06425	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
CDH84_RS06430	COG0557	exoribonuclease II activity
CDH84_RS06445	COG2814	Major facilitator Superfamily
CDH84_RS06455	COG1131	(ABC) transporter
CDH84_RS06465	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
CDH84_RS06470	COG1396	sequence-specific DNA binding
CDH84_RS06525	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
CDH84_RS06530	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
CDH84_RS06560	COG1702	phosphate starvation-inducible protein PhoH
CDH84_RS06585	COG0233	cytoplasmic translational termination
CDH84_RS06600	COG0444	Belongs to the ABC transporter superfamily
CDH84_RS06605	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CDH84_RS06610	COG0601	transmembrane transport
CDH84_RS06615	COG0747	negative chemotaxis
CDH84_RS06620	COG0081	regulation of translation
CDH84_RS06645	COG5433	transposase activity
CDH84_RS06650	COG1473	amidohydrolase
CDH84_RS06655	COG0583	DNA-binding transcription factor activity
CDH84_RS06675	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
CDH84_RS06680	COG1674	ftsk spoiiie
CDH84_RS06685	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
CDH84_RS06710	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
CDH84_RS06745	COG0673	inositol 2-dehydrogenase activity
CDH84_RS06760	COG1028	Short-chain dehydrogenase reductase Sdr
CDH84_RS06805	COG1114	Component of the transport system for branched-chain amino acids
CDH84_RS06810	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
CDH84_RS06810	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
CDH84_RS06830	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
CDH84_RS06840	COG0708	Exodeoxyribonuclease III
CDH84_RS06845	COG1393	Belongs to the ArsC family
CDH84_RS06850	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
CDH84_RS06855	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
CDH84_RS06895	COG0470	DNA polymerase III
CDH84_RS06910	COG0517	IMP dehydrogenase activity
CDH84_RS06930	COG0559	Belongs to the binding-protein-dependent transport system permease family
CDH84_RS06950	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
CDH84_RS06955	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
CDH84_RS06965	COG0531	amino acid
CDH84_RS06970	COG0569	domain protein
CDH84_RS06975	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
CDH84_RS06985	COG1187	pseudouridine synthase activity
CDH84_RS07035	COG1827	regulation of RNA biosynthetic process
CDH84_RS07050	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
CDH84_RS07055	COG1254	Belongs to the acylphosphatase family
CDH84_RS07065	COG0765	amino acid transport
CDH84_RS07070	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CDH84_RS07085	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
CDH84_RS07120	COG1484	DNA-dependent DNA replication
CDH84_RS07135	COG5002	protein histidine kinase activity
CDH84_RS07140	COG0745	RESPONSE REGULATOR receiver
CDH84_RS07155	COG1704	LemA family
CDH84_RS07165	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
CDH84_RS07170	COG0569	domain protein
CDH84_RS07195	COG1114	Component of the transport system for branched-chain amino acids
CDH84_RS07200	COG1063	alcohol dehydrogenase
CDH84_RS07225	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CDH84_RS07230	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
CDH84_RS07240	COG0217	transcriptional regulatory protein
CDH84_RS07250	COG2376	Dihydroxyacetone kinase
CDH84_RS07255	COG1309	transcriptional regulator
CDH84_RS07265	COG2376	Dihydroxyacetone kinase
CDH84_RS07270	COG1461	Dihydroxyacetone kinase
CDH84_RS07275	COG3412	dihydroxyacetone kinase, phosphotransfer subunit
CDH84_RS07280	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
CDH84_RS07290	COG0789	Transcriptional regulator
CDH84_RS07305	COG2226	methyltransferase
CDH84_RS07310	COG0799	negative regulation of ribosome biogenesis
CDH84_RS07320	COG1713	HD superfamily hydrolase involved in NAD metabolism
CDH84_RS07325	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
CDH84_RS07330	COG1534	Rna-binding protein
CDH84_RS07335	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
CDH84_RS07340	COG2179	HAD superfamily (subfamily IIIA) phosphatase, TIGR01668
CDH84_RS07365	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
CDH84_RS07365	COG0574	Belongs to the PEP-utilizing enzyme family
CDH84_RS07375	COG0517	IMP dehydrogenase activity
CDH84_RS07385	COG1335	isochorismatase
CDH84_RS07390	COG4465	DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor
CDH84_RS07395	COG0436	Aminotransferase
CDH84_RS07400	COG0589	response to stress
CDH84_RS07405	COG0561	phosphatase activity
CDH84_RS07410	COG0252	asparaginase activity
CDH84_RS07420	COG4989	oxidoreductase activity
CDH84_RS07425	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
CDH84_RS07430	COG1705	Flagellar rod assembly protein muramidase FlgJ
CDH84_RS07430	COG3942	CHAP domain
CDH84_RS07440	COG0736	holo-[acyl-carrier-protein] synthase activity
CDH84_RS07445	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
CDH84_RS07455	COG1482	cell wall glycoprotein biosynthetic process
CDH84_RS07460	COG1940	carbohydrate kinase activity
CDH84_RS07465	COG2190	(PTS) system
CDH84_RS07465	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CDH84_RS07465	COG1263	PTS System
CDH84_RS07470	COG1621	beta-fructofuranosidase activity
CDH84_RS07475	COG1609	Transcriptional regulator
CDH84_RS07480	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
CDH84_RS07490	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
CDH84_RS07540	COG2131	deaminase
CDH84_RS07555	COG2814	Major facilitator Superfamily
CDH84_RS07585	COG0629	single-stranded DNA binding
CDH84_RS07590	COG0360	Binds together with S18 to 16S ribosomal RNA
CDH84_RS07595	COG1194	a g-specific adenine glycosylase
CDH84_RS07605	COG3118	belongs to the thioredoxin family
CDH84_RS07635	COG0681	Belongs to the peptidase S26 family
CDH84_RS07640	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
CDH84_RS07655	COG1882	Formate acetyltransferase
CDH84_RS07660	COG3576	pyridoxamine 5-phosphate
CDH84_RS07665	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
CDH84_RS07680	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
CDH84_RS07690	COG2814	Major facilitator Superfamily
CDH84_RS07695	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
CDH84_RS07710	COG0142	geranyltranstransferase activity
CDH84_RS07715	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
CDH84_RS07720	COG4988	ABC transporter
CDH84_RS07725	COG1294	oxidase, subunit
CDH84_RS07730	COG1271	oxidase subunit
CDH84_RS07735	COG1252	NADH dehydrogenase
CDH84_RS07775	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
CDH84_RS07780	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
CDH84_RS07780	COG3925	protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity
CDH84_RS07780	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
CDH84_RS07785	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
CDH84_RS07790	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
CDH84_RS07795	COG3711	transcriptional antiterminator
CDH84_RS07795	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
CDH84_RS07815	COG4221	oxidoreductase activity
CDH84_RS07830	COG0656	L-ascorbic acid biosynthetic process
CDH84_RS07835	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
CDH84_RS07850	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
CDH84_RS07855	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
CDH84_RS07860	COG0789	Transcriptional regulator
CDH84_RS07875	COG2081	HI0933 family
CDH84_RS07905	COG0456	acetyltransferase
CDH84_RS07910	COG1214	PFAM Peptidase M22, glycoprotease
CDH84_RS07925	COG3942	CHAP domain
CDH84_RS07930	COG0174	glutamine synthetase
CDH84_RS07935	COG0789	Transcriptional regulator
CDH84_RS07950	COG2503	HAD superfamily, subfamily IIIB (Acid phosphatase)
CDH84_RS07980	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
CDH84_RS08005	COG1162	GTPase activity
CDH84_RS08030	COG0084	hydrolase, TatD family'
CDH84_RS08055	COG3966	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
CDH84_RS08060	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
CDH84_RS08065	COG1696	Membrane protein involved in D-alanine export
CDH84_RS08085	COG0745	RESPONSE REGULATOR receiver
CDH84_RS08095	COG3314	Sporulation integral membrane protein YlbJ
CDH84_RS08110	COG4175	Glycine betaine
CDH84_RS08110	COG3448	diguanylate cyclase activity
CDH84_RS08120	COG3957	D-xylulose 5-phosphate D-fructose 6-phosphate phosphoketolase
CDH84_RS08140	COG1070	Carbohydrate kinase
CDH84_RS08150	COG3775	system Galactitol-specific IIC component
CDH84_RS08155	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
CDH84_RS08165	COG1609	Transcriptional regulator
CDH84_RS08250	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
CDH84_RS08255	COG1428	Deoxynucleoside kinase
CDH84_RS08265	COG0542	response to heat
CDH84_RS08270	COG4463	regulation of RNA biosynthetic process
CDH84_RS08280	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
CDH84_RS08290	COG0450	alkyl hydroperoxide reductase
CDH84_RS08305	COG0025	NhaP-type Na H and K H
CDH84_RS08315	COG1619	proteins homologs of microcin C7 resistance protein MccF
CDH84_RS08320	COG3590	peptidase
CDH84_RS08350	COG1609	Transcriptional regulator
CDH84_RS08375	COG2176	DNA-directed DNA polymerase activity
CDH84_RS08380	COG1388	LysM domain
CDH84_RS08380	COG1705	Flagellar rod assembly protein muramidase FlgJ
CDH84_RS08395	COG4589	Belongs to the CDS family
CDH84_RS08400	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
CDH84_RS08405	COG1862	Preprotein translocase
CDH84_RS08425	COG3493	citrate carrier protein
CDH84_RS08430	COG3290	protein histidine kinase activity
CDH84_RS08435	COG4565	transcriptional regulatory protein
CDH84_RS08440	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
CDH84_RS08450	COG3842	ATPase activity
CDH84_RS08535	COG0737	Belongs to the 5'-nucleotidase family
CDH84_RS08545	COG1363	Peptidase, m42
CDH84_RS08560	COG2207	Transcriptional regulator
CDH84_RS08560	COG4753	response regulator
CDH84_RS08565	COG2972	Histidine kinase
CDH84_RS08570	COG3716	PTS system mannose fructose sorbose family IID component
CDH84_RS08575	COG3715	PTS system
CDH84_RS08610	COG1131	(ABC) transporter
CDH84_RS08620	COG2274	protein secretion by the type I secretion system
CDH84_RS08625	COG3290	protein histidine kinase activity
CDH84_RS08645	COG1263	PTS System
CDH84_RS08645	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CDH84_RS08645	COG2190	(PTS) system
CDH84_RS08650	COG5002	protein histidine kinase activity
CDH84_RS08655	COG0745	RESPONSE REGULATOR receiver
CDH84_RS08665	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
CDH84_RS08670	COG0581	inorganic phosphate transmembrane transporter activity
CDH84_RS08675	COG0573	inorganic phosphate transmembrane transporter activity
CDH84_RS08690	COG1385	rRNA (uridine-N3-)-methyltransferase activity
CDH84_RS08705	COG0789	Transcriptional regulator
CDH84_RS08715	COG0494	nUDIX hydrolase
CDH84_RS08730	COG0456	acetyltransferase
CDH84_RS08735	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
CDH84_RS08765	COG0582	viral genome integration into host DNA
CDH84_RS08775	COG2946	Replication initiation factor
CDH84_RS08800	COG2378	regulation of single-species biofilm formation
CDH84_RS08805	COG0693	protein deglycase activity
CDH84_RS08865	COG1131	(ABC) transporter
CDH84_RS08875	COG1396	sequence-specific DNA binding
CDH84_RS08895	COG1694	Mazg nucleotide pyrophosphohydrolase
CDH84_RS08900	COG1611	Belongs to the LOG family
CDH84_RS08910	COG2897	thiosulfate sulfurtransferase activity
CDH84_RS08930	COG0371	Dehydrogenase
CDH84_RS08940	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
CDH84_RS08940	COG0646	methionine synthase
CDH84_RS08955	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
CDH84_RS08970	COG0745	RESPONSE REGULATOR receiver
CDH84_RS08975	COG2205	protein histidine kinase activity
CDH84_RS08975	COG2770	Histidine kinase
CDH84_RS08990	COG2814	Major facilitator Superfamily
CDH84_RS08995	COG4667	esterase of the alpha-beta hydrolase superfamily
CDH84_RS09020	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
CDH84_RS09025	COG0564	pseudouridine synthase activity
CDH84_RS09045	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
CDH84_RS09050	COG2820	Catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1- phosphate. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis
CDH84_RS09070	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
CDH84_RS09075	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
CDH84_RS09075	COG1116	anion transmembrane transporter activity
CDH84_RS09085	COG0561	phosphatase activity
CDH84_RS09090	COG2514	catechol 2,3-dioxygenase activity
CDH84_RS09100	COG0602	queuosine metabolic process
CDH84_RS09120	COG1328	CTP reductase activity
CDH84_RS09140	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
CDH84_RS09150	COG1393	Belongs to the ArsC family
CDH84_RS09155	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
CDH84_RS09165	COG2818	Glycosylase
CDH84_RS09215	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CDH84_RS09220	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CDH84_RS09240	COG0267	Belongs to the bacterial ribosomal protein bL33 family
CDH84_RS09305	COG4974	Belongs to the 'phage' integrase family
CDH84_RS09315	COG0745	RESPONSE REGULATOR receiver
CDH84_RS09320	COG5002	protein histidine kinase activity
CDH84_RS09325	COG1288	antiporter activity
CDH84_RS09335	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
CDH84_RS09340	COG3852	Histidine kinase
CDH84_RS09345	COG0784	Response regulator, receiver
CDH84_RS09350	COG1125	glycine betaine transport
CDH84_RS09350	COG0517	IMP dehydrogenase activity
CDH84_RS09355	COG1174	glycine betaine transport
CDH84_RS09360	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
CDH84_RS09360	COG0392	lysyltransferase activity
CDH84_RS09370	COG3759	membrane
CDH84_RS09480	COG2314	TM2 domain
CDH84_RS09500	COG0582	viral genome integration into host DNA
CDH84_RS09520	COG0305	Participates in initiation and elongation during chromosome replication
CDH84_RS09540	COG2095	MarC family integral membrane protein
CDH84_RS09545	COG0482	sulfurtransferase activity
CDH84_RS09550	COG1760	l-serine dehydratase
CDH84_RS09555	COG1760	l-serine dehydratase
CDH84_RS09560	COG0741	lytic transglycosylase activity
CDH84_RS09585	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
CDH84_RS09590	COG0612	Peptidase, M16
CDH84_RS09595	COG0612	Peptidase, M16
CDH84_RS09600	COG2501	S4 domain
CDH84_RS09620	COG0517	IMP dehydrogenase activity
CDH84_RS09620	COG0516	GMP reductase activity
CDH84_RS09630	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
CDH84_RS09645	COG0454	-acetyltransferase
CDH84_RS09660	COG0549	Belongs to the carbamate kinase family
CDH84_RS09675	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
CDH84_RS09680	COG0488	(ABC) transporter
CDH84_RS09685	COG4485	Bacterial membrane protein, YfhO
CDH84_RS09705	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
CDH84_RS09710	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
CDH84_RS09715	COG1475	DNA binding
CDH84_RS09725	COG0592	DNA-directed DNA polymerase activity
CDH84_RS09730	COG1597	lipid kinase activity
CDH84_RS09745	COG0012	GTP binding
CDH84_RS09755	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
CDH84_RS09765	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
CDH84_RS09795	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
CDH84_RS09980	COG0436	Aminotransferase
CDH84_RS10000	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
CDH84_RS10010	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
CDH84_RS10025	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
CDH84_RS10060	COG1175	transmembrane transport
CDH84_RS10065	COG0395	ABC-type sugar transport system, permease component
CDH84_RS10080	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
CDH84_RS10105	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
CDH84_RS10120	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
CDH84_RS10145	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
CDH84_RS10155	COG2755	lipolytic protein G-D-S-L family
CDH84_RS10155	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
CDH84_RS10160	COG1012	belongs to the aldehyde dehydrogenase family
CDH84_RS10160	COG1454	alcohol dehydrogenase
CDH84_RS10165	COG1064	alcohol dehydrogenase
CDH84_RS10175	COG0534	Mate efflux family protein
CDH84_RS10285	COG0201	protein transport
CDH84_RS10305	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
CDH84_RS10315	COG0202	RNA polymerase activity
CDH84_RS10425	COG0582	viral genome integration into host DNA
CDH84_RS10450	COG1395	domain, Protein
CDH84_RS10515	COG1705	Flagellar rod assembly protein muramidase FlgJ
CDH84_RS10530	COG0443	Heat shock 70 kDa protein
CDH84_RS10540	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
CDH84_RS10550	COG0351	phosphomethylpyrimidine kinase
CDH84_RS10555	COG4720	Psort location CytoplasmicMembrane, score
CDH84_RS10565	COG0668	transmembrane transport
CDH84_RS10595	COG0756	dUTP diphosphatase activity
CDH84_RS10610	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
CDH84_RS10625	COG1879	ABC-type sugar transport system periplasmic component
CDH84_RS10630	COG1172	Belongs to the binding-protein-dependent transport system permease family
CDH84_RS10645	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CDH84_RS10650	COG1609	Transcriptional regulator
CDH84_RS10660	COG0577	efflux transmembrane transporter activity
CDH84_RS10665	COG1136	(ABC) transporter
CDH84_RS10670	COG0745	RESPONSE REGULATOR receiver
CDH84_RS10675	COG5002	protein histidine kinase activity
CDH84_RS10690	COG0191	fructose-bisphosphate aldolase activity
CDH84_RS10710	COG1461	Dihydroxyacetone kinase
CDH84_RS10740	COG1755	Isoprenylcysteine carboxyl methyltransferase
CDH84_RS10750	COG0745	RESPONSE REGULATOR receiver
CDH84_RS10760	COG1126	abc transporter atp-binding protein
CDH84_RS10765	COG0765	amino acid transport
CDH84_RS10785	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
CDH84_RS10795	COG0719	Fe-S assembly protein
CDH84_RS10800	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
CDH84_RS10810	COG0719	Fe-S assembly protein
CDH84_RS10815	COG1686	Belongs to the peptidase S11 family
CDH84_RS10820	COG1686	Belongs to the peptidase S11 family
CDH84_RS10825	COG4166	transmembrane transport
CDH84_RS10830	COG0601	transmembrane transport
CDH84_RS10835	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CDH84_RS10840	COG0444	Belongs to the ABC transporter superfamily
CDH84_RS10845	COG4608	Belongs to the ABC transporter superfamily
CDH84_RS10950	COG0582	viral genome integration into host DNA
CDH84_RS10975	COG1395	domain, Protein