locus-tag class description CUGBS08_RS00100 PF14572 Phosphoribosyl synthetase-associated domain CUGBS08_RS00100 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CUGBS08_RS00105 PF00155 Aminotransferase class I and II CUGBS08_RS00110 PF02565 Recombination protein O C terminal CUGBS08_RS00110 PF11967 Recombination protein O N terminal CUGBS08_RS00120 PF02504 Fatty acid synthesis protein CUGBS08_RS00125 PF00550 Phosphopantetheine attachment site CUGBS08_RS00130 PF01259 SAICAR synthetase CUGBS08_RS00135 PF02769 AIR synthase related protein, C-terminal domain CUGBS08_RS00135 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain CUGBS08_RS00135 PF00586 AIR synthase related protein, N-terminal domain CUGBS08_RS00140 PF13537 Glutamine amidotransferase domain CUGBS08_RS00140 PF00156 Phosphoribosyl transferase domain CUGBS08_RS00145 PF00586 AIR synthase related protein, N-terminal domain CUGBS08_RS00145 PF02769 AIR synthase related protein, C-terminal domain CUGBS08_RS00150 PF00551 Formyl transferase CUGBS08_RS00160 PF02142 MGS-like domain CUGBS08_RS00160 PF01808 AICARFT/IMPCHase bienzyme CUGBS08_RS00165 PF01476 LysM domain CUGBS08_RS00165 PF01551 Peptidase family M23 CUGBS08_RS00175 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase CUGBS08_RS00185 PF00528 Binding-protein-dependent transport system inner membrane component CUGBS08_RS00190 PF00528 Binding-protein-dependent transport system inner membrane component CUGBS08_RS00205 PF00701 Dihydrodipicolinate synthetase family CUGBS08_RS00210 PF00480 ROK family CUGBS08_RS00215 PF05448 Acetyl xylan esterase (AXE1) CUGBS08_RS00225 PF02843 Phosphoribosylglycinamide synthetase, C domain CUGBS08_RS00225 PF02844 Phosphoribosylglycinamide synthetase, N domain CUGBS08_RS00225 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CUGBS08_RS00230 PF00731 AIR carboxylase CUGBS08_RS00235 PF02222 ATP-grasp domain CUGBS08_RS00235 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain CUGBS08_RS00245 PF10397 Adenylosuccinate lyase C-terminus CUGBS08_RS00245 PF00206 Lyase CUGBS08_RS00255 PF05496 Holliday junction DNA helicase RuvB P-loop domain CUGBS08_RS00255 PF05491 RuvB C-terminal winged helix domain CUGBS08_RS00255 PF17864 RuvB AAA lid domain CUGBS08_RS00260 PF01451 Low molecular weight phosphotyrosine protein phosphatase CUGBS08_RS00270 PF01757 Acyltransferase family CUGBS08_RS00275 PF00465 Iron-containing alcohol dehydrogenase CUGBS08_RS00275 PF00171 Aldehyde dehydrogenase family CUGBS08_RS00280 PF00107 Zinc-binding dehydrogenase CUGBS08_RS00280 PF08240 Alcohol dehydrogenase GroES-like domain CUGBS08_RS00285 PF14821 Threonine synthase N terminus CUGBS08_RS00285 PF00291 Pyridoxal-phosphate dependent enzyme CUGBS08_RS00290 PF01554 MatE CUGBS08_RS00295 PF00338 Ribosomal protein S10p/S20e CUGBS08_RS00300 PF00297 Ribosomal protein L3 CUGBS08_RS00305 PF00573 Ribosomal protein L4/L1 family CUGBS08_RS00310 PF00276 Ribosomal protein L23 CUGBS08_RS00315 PF03947 Ribosomal Proteins L2, C-terminal domain CUGBS08_RS00315 PF00181 Ribosomal Proteins L2, RNA binding domain CUGBS08_RS00320 PF00203 Ribosomal protein S19 CUGBS08_RS00325 PF00237 Ribosomal protein L22p/L17e CUGBS08_RS00330 PF07650 KH domain CUGBS08_RS00330 PF00189 Ribosomal protein S3, C-terminal domain CUGBS08_RS00335 PF00252 Ribosomal protein L16p/L10e CUGBS08_RS00340 PF00831 Ribosomal L29 protein CUGBS08_RS00345 PF00366 Ribosomal protein S17 CUGBS08_RS00350 PF00238 Ribosomal protein L14p/L23e CUGBS08_RS00355 PF00467 KOW motif CUGBS08_RS00355 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 CUGBS08_RS00360 PF00281 Ribosomal protein L5 CUGBS08_RS00360 PF00673 ribosomal L5P family C-terminus CUGBS08_RS00365 PF00253 Ribosomal protein S14p/S29e CUGBS08_RS00370 PF00410 Ribosomal protein S8 CUGBS08_RS00375 PF00347 Ribosomal protein L6 CUGBS08_RS00380 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast CUGBS08_RS00385 PF00333 Ribosomal protein S5, N-terminal domain CUGBS08_RS00385 PF03719 Ribosomal protein S5, C-terminal domain CUGBS08_RS00390 PF00327 Ribosomal protein L30p/L7e CUGBS08_RS00395 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A CUGBS08_RS00400 PF00344 SecY translocase CUGBS08_RS00410 PF01176 Translation initiation factor 1A / IF-1 CUGBS08_RS00415 PF00416 Ribosomal protein S13/S18 CUGBS08_RS00420 PF00411 Ribosomal protein S11 CUGBS08_RS00425 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain CUGBS08_RS00425 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain CUGBS08_RS00425 PF01000 RNA polymerase Rpb3/RpoA insert domain CUGBS08_RS00430 PF01196 Ribosomal protein L17 CUGBS08_RS00540 PF11208 Protein of unknown function (DUF2992) CUGBS08_RS00565 PF00717 Peptidase S24-like CUGBS08_RS00565 PF01381 Helix-turn-helix CUGBS08_RS00575 PF10548 P22AR C-terminal domain CUGBS08_RS00575 PF08346 AntA/AntB antirepressor CUGBS08_RS00690 PF17288 Terminase RNAseH like domain CUGBS08_RS00690 PF04466 Phage terminase large subunit CUGBS08_RS00820 PF02557 D-alanyl-D-alanine carboxypeptidase CUGBS08_RS00825 PF13457 GW (Gly-Tryp) dipeptide domain CUGBS08_RS00825 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase CUGBS08_RS00830 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding CUGBS08_RS00830 PF01628 HrcA protein C terminal domain CUGBS08_RS00835 PF01025 GrpE CUGBS08_RS00840 PF00012 Hsp70 protein CUGBS08_RS00845 PF00684 DnaJ central domain CUGBS08_RS00845 PF00226 DnaJ domain CUGBS08_RS00845 PF01556 DnaJ C terminal domain CUGBS08_RS00850 PF00392 Bacterial regulatory proteins, gntR family CUGBS08_RS00850 PF00155 Aminotransferase class I and II CUGBS08_RS00855 PF01416 tRNA pseudouridine synthase CUGBS08_RS00860 PF08543 Phosphomethylpyrimidine kinase CUGBS08_RS00865 PF07155 ECF-type riboflavin transporter, S component CUGBS08_RS00870 PF04260 Protein of unknown function (DUF436) CUGBS08_RS00875 PF00924 Mechanosensitive ion channel CUGBS08_RS00880 PF05698 Bacterial trigger factor protein (TF) C-terminus CUGBS08_RS00880 PF05697 Bacterial trigger factor protein (TF) CUGBS08_RS00880 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CUGBS08_RS00885 PF05066 HB1, ASXL, restriction endonuclease HTH domain CUGBS08_RS00890 PF00117 Glutamine amidotransferase class-I CUGBS08_RS00890 PF06418 CTP synthase N-terminus CUGBS08_RS00905 PF00692 dUTPase CUGBS08_RS00910 PF18073 Rubredoxin metal binding domain CUGBS08_RS00915 PF00484 Carbonic anhydrase CUGBS08_RS00920 PF07992 Pyridine nucleotide-disulphide oxidoreductase CUGBS08_RS00920 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CUGBS08_RS00930 PF00749 tRNA synthetases class I (E and Q), catalytic domain CUGBS08_RS00935 PF13407 Periplasmic binding protein domain CUGBS08_RS00940 PF02653 Branched-chain amino acid transport system / permease component CUGBS08_RS00945 PF00005 ABC transporter CUGBS08_RS00950 PF05025 RbsD / FucU transport protein family CUGBS08_RS00955 PF00294 pfkB family carbohydrate kinase CUGBS08_RS00960 PF00356 Bacterial regulatory proteins, lacI family CUGBS08_RS00965 PF02687 FtsX-like permease family CUGBS08_RS00970 PF00005 ABC transporter CUGBS08_RS00975 PF00072 Response regulator receiver domain CUGBS08_RS00975 PF00486 Transcriptional regulatory protein, C terminal CUGBS08_RS00980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CUGBS08_RS00980 PF00512 His Kinase A (phospho-acceptor) domain CUGBS08_RS00985 PF00764 Arginosuccinate synthase CUGBS08_RS00990 PF00206 Lyase CUGBS08_RS00990 PF14698 Argininosuccinate lyase C-terminal CUGBS08_RS00995 PF01116 Fructose-bisphosphate aldolase class-II CUGBS08_RS01000 PF00056 lactate/malate dehydrogenase, NAD binding domain CUGBS08_RS01000 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CUGBS08_RS01005 PF00830 Ribosomal L28 family CUGBS08_RS01010 PF03780 Asp23 family, cell envelope-related function CUGBS08_RS01015 PF13684 Dihydroxyacetone kinase family CUGBS08_RS01015 PF02734 DAK2 domain CUGBS08_RS01030 PF13936 Helix-turn-helix domain CUGBS08_RS01040 PF16828 GAG-binding domain on surface antigen CUGBS08_RS01040 PF00746 LPXTG cell wall anchor motif CUGBS08_RS01040 PF05062 RICH domain CUGBS08_RS01040 PF04650 YSIRK type signal peptide CUGBS08_RS01055 PF00005 ABC transporter CUGBS08_RS01060 PF00528 Binding-protein-dependent transport system inner membrane component CUGBS08_RS01070 PF02673 Bacitracin resistance protein BacA CUGBS08_RS01075 PF05389 Negative regulator of genetic competence (MecA) CUGBS08_RS01080 PF00953 Glycosyl transferase family 4 CUGBS08_RS01085 PF00005 ABC transporter CUGBS08_RS01090 PF01458 Uncharacterized protein family (UPF0051) CUGBS08_RS01095 PF00266 Aminotransferase class-V CUGBS08_RS01100 PF01592 NifU-like N terminal domain CUGBS08_RS01105 PF01458 Uncharacterized protein family (UPF0051) CUGBS08_RS01110 PF07943 Penicillin-binding protein 5, C-terminal domain CUGBS08_RS01110 PF00768 D-alanyl-D-alanine carboxypeptidase CUGBS08_RS01115 PF07943 Penicillin-binding protein 5, C-terminal domain CUGBS08_RS01115 PF00768 D-alanyl-D-alanine carboxypeptidase CUGBS08_RS01120 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CUGBS08_RS01125 PF00528 Binding-protein-dependent transport system inner membrane component CUGBS08_RS01130 PF00528 Binding-protein-dependent transport system inner membrane component CUGBS08_RS01130 PF12911 N-terminal TM domain of oligopeptide transport permease C CUGBS08_RS01135 PF00005 ABC transporter CUGBS08_RS01135 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CUGBS08_RS01140 PF00005 ABC transporter CUGBS08_RS01140 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CUGBS08_RS01170 PF00288 GHMP kinases N terminal domain CUGBS08_RS01170 PF08544 GHMP kinases C terminal CUGBS08_RS01175 PF01047 MarR family CUGBS08_RS01180 PF00005 ABC transporter CUGBS08_RS01185 PF00950 ABC 3 transport family CUGBS08_RS01195 PF01479 S4 domain CUGBS08_RS01195 PF00579 tRNA synthetases class I (W and Y) CUGBS08_RS01200 PF00905 Penicillin binding protein transpeptidase domain CUGBS08_RS01200 PF00912 Transglycosylase CUGBS08_RS01205 PF04561 RNA polymerase Rpb2, domain 2 CUGBS08_RS01205 PF10385 RNA polymerase beta subunit external 1 domain CUGBS08_RS01205 PF04560 RNA polymerase Rpb2, domain 7 CUGBS08_RS01205 PF04565 RNA polymerase Rpb2, domain 3 CUGBS08_RS01205 PF00562 RNA polymerase Rpb2, domain 6 CUGBS08_RS01205 PF04563 RNA polymerase beta subunit CUGBS08_RS01210 PF04998 RNA polymerase Rpb1, domain 5 CUGBS08_RS01210 PF04983 RNA polymerase Rpb1, domain 3 CUGBS08_RS01210 PF00623 RNA polymerase Rpb1, domain 2 CUGBS08_RS01210 PF04997 RNA polymerase Rpb1, domain 1 CUGBS08_RS01210 PF05000 RNA polymerase Rpb1, domain 4 CUGBS08_RS01225 PF00437 Type II/IV secretion system protein CUGBS08_RS01230 PF00482 Type II secretion system (T2SS), protein F CUGBS08_RS01265 PF00871 Acetokinase family CUGBS08_RS01285 PF14748 Pyrroline-5-carboxylate reductase dimerisation CUGBS08_RS01285 PF03807 NADP oxidoreductase coenzyme F420-dependent CUGBS08_RS01290 PF05343 M42 glutamyl aminopeptidase CUGBS08_RS01305 PF00085 Thioredoxin CUGBS08_RS01310 PF14794 Domain of unknown function (DUF4479) CUGBS08_RS01310 PF01588 Putative tRNA binding domain CUGBS08_RS01320 PF00436 Single-strand binding protein family CUGBS08_RS01325 PF13419 Haloacid dehalogenase-like hydrolase CUGBS08_RS01330 PF06580 Histidine kinase CUGBS08_RS01330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CUGBS08_RS01330 PF07694 5TMR of 5TMR-LYT CUGBS08_RS01335 PF00072 Response regulator receiver domain CUGBS08_RS01335 PF04397 LytTr DNA-binding domain CUGBS08_RS01340 PF03788 LrgA family CUGBS08_RS01345 PF04172 LrgB-like family CUGBS08_RS01350 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CUGBS08_RS01355 PF00528 Binding-protein-dependent transport system inner membrane component CUGBS08_RS01360 PF12911 N-terminal TM domain of oligopeptide transport permease C CUGBS08_RS01360 PF00528 Binding-protein-dependent transport system inner membrane component CUGBS08_RS01365 PF12558 ATP-binding cassette cobalt transporter CUGBS08_RS01365 PF00005 ABC transporter CUGBS08_RS01370 PF00005 ABC transporter CUGBS08_RS01375 PF02378 Phosphotransferase system, EIIC CUGBS08_RS01375 PF00367 phosphotransferase system, EIIB CUGBS08_RS01380 PF16657 Maltogenic Amylase, C-terminal domain CUGBS08_RS01380 PF00128 Alpha amylase, catalytic domain CUGBS08_RS01385 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CUGBS08_RS01390 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CUGBS08_RS01395 PF03611 PTS system sugar-specific permease component CUGBS08_RS01400 PF00456 Transketolase, thiamine diphosphate binding domain CUGBS08_RS01405 PF02780 Transketolase, C-terminal domain CUGBS08_RS01405 PF02779 Transketolase, pyrimidine binding domain CUGBS08_RS01405 PF13292 1-deoxy-D-xylulose-5-phosphate synthase CUGBS08_RS01410 PF00970 Oxidoreductase FAD-binding domain CUGBS08_RS01410 PF00111 2Fe-2S iron-sulfur cluster binding domain CUGBS08_RS01410 PF00175 Oxidoreductase NAD-binding domain CUGBS08_RS01415 PF00312 Ribosomal protein S15 CUGBS08_RS01420 PF00575 S1 RNA binding domain CUGBS08_RS01420 PF01138 3' exoribonuclease family, domain 1 CUGBS08_RS01420 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain CUGBS08_RS01420 PF03725 3' exoribonuclease family, domain 2 CUGBS08_RS01420 PF00013 KH domain CUGBS08_RS01430 PF06426 Serine acetyltransferase, N-terminal CUGBS08_RS01430 PF00132 Bacterial transferase hexapeptide (six repeats) CUGBS08_RS01440 PF01406 tRNA synthetases class I (C) catalytic domain CUGBS08_RS01440 PF09190 DALR domain CUGBS08_RS01445 PF00636 Ribonuclease III domain CUGBS08_RS01450 PF08032 RNA 2'-O ribose methyltransferase substrate binding CUGBS08_RS01450 PF00588 SpoU rRNA Methylase family CUGBS08_RS01460 PF02645 Uncharacterised protein, DegV family COG1307 CUGBS08_RS01465 PF00572 Ribosomal protein L13 CUGBS08_RS01470 PF00380 Ribosomal protein S9/S16 CUGBS08_RS01475 PF00589 Phage integrase family CUGBS08_RS01475 PF02899 Phage integrase, N-terminal SAM-like domain CUGBS08_RS01510 PF02486 Replication initiation factor CUGBS08_RS01520 PF01076 Plasmid recombination enzyme CUGBS08_RS01540 PF06013 Proteins of 100 residues with WXG CUGBS08_RS01580 PF01381 Helix-turn-helix CUGBS08_RS01585 PF07690 Major Facilitator Superfamily CUGBS08_RS01590 PF00528 Binding-protein-dependent transport system inner membrane component CUGBS08_RS01595 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CUGBS08_RS01600 PF00528 Binding-protein-dependent transport system inner membrane component CUGBS08_RS01605 PF00005 ABC transporter CUGBS08_RS01605 PF00571 CBS domain CUGBS08_RS01745 PF03352 Methyladenine glycosylase CUGBS08_RS01745 PF00958 GMP synthase C terminal domain CUGBS08_RS01745 PF00117 Glutamine amidotransferase class-I CUGBS08_RS01745 PF13302 Acetyltransferase (GNAT) domain CUGBS08_RS01745 PF13673 Acetyltransferase (GNAT) domain CUGBS08_RS01760 PF04297 Putative helix-turn-helix protein, YlxM / p13 like CUGBS08_RS01770 PF00440 Bacterial regulatory proteins, tetR family CUGBS08_RS01780 PF00005 ABC transporter CUGBS08_RS01790 PF03551 Transcriptional regulator PadR-like family CUGBS08_RS01800 PF01979 Amidohydrolase family CUGBS08_RS01805 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family CUGBS08_RS01810 PF02091 Glycyl-tRNA synthetase alpha subunit CUGBS08_RS01815 PF02525 Flavodoxin-like fold CUGBS08_RS01820 PF02092 Glycyl-tRNA synthetase beta subunit CUGBS08_RS01820 PF05746 DALR anticodon binding domain CUGBS08_RS01825 PF05979 Bacterial protein of unknown function (DUF896) CUGBS08_RS01835 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CUGBS08_RS01835 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CUGBS08_RS01840 PF16901 C-terminal domain of alpha-glycerophosphate oxidase CUGBS08_RS01840 PF01266 FAD dependent oxidoreductase CUGBS08_RS01845 PF00230 Major intrinsic protein CUGBS08_RS01850 PF07992 Pyridine nucleotide-disulphide oxidoreductase CUGBS08_RS01850 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CUGBS08_RS01860 PF02780 Transketolase, C-terminal domain CUGBS08_RS01860 PF00456 Transketolase, thiamine diphosphate binding domain CUGBS08_RS01860 PF02779 Transketolase, pyrimidine binding domain CUGBS08_RS01870 PF00005 ABC transporter CUGBS08_RS01880 PF02378 Phosphotransferase system, EIIC CUGBS08_RS01880 PF00367 phosphotransferase system, EIIB CUGBS08_RS01880 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CUGBS08_RS01885 PF00696 Amino acid kinase family CUGBS08_RS01890 PF00171 Aldehyde dehydrogenase family CUGBS08_RS01895 PF01795 MraW methylase family CUGBS08_RS01905 PF00905 Penicillin binding protein transpeptidase domain CUGBS08_RS01905 PF03793 PASTA domain CUGBS08_RS01905 PF03717 Penicillin-binding Protein dimerisation domain CUGBS08_RS01910 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 CUGBS08_RS01910 PF00953 Glycosyl transferase family 4 CUGBS08_RS01915 PF00270 DEAD/DEAH box helicase CUGBS08_RS01915 PF00271 Helicase conserved C-terminal domain CUGBS08_RS01920 PF00497 Bacterial extracellular solute-binding proteins, family 3 CUGBS08_RS01925 PF00528 Binding-protein-dependent transport system inner membrane component CUGBS08_RS01930 PF00005 ABC transporter CUGBS08_RS01940 PF07992 Pyridine nucleotide-disulphide oxidoreductase CUGBS08_RS01945 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain CUGBS08_RS01945 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family CUGBS08_RS01945 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain CUGBS08_RS01950 PF02540 NAD synthase CUGBS08_RS01955 PF03051 Peptidase C1-like family CUGBS08_RS01960 PF00905 Penicillin binding protein transpeptidase domain CUGBS08_RS01960 PF00912 Transglycosylase CUGBS08_RS01965 PF03838 Recombination protein U CUGBS08_RS01970 PF06908 YspA SLOG family CUGBS08_RS01975 PF05103 DivIVA protein CUGBS08_RS01985 PF01170 Putative RNA methylase family UPF0020 CUGBS08_RS01985 PF02926 THUMP domain CUGBS08_RS01990 PF18041 MapZ extracellular domain 1 CUGBS08_RS01990 PF18708 MapZ extracellular C-terminal domain 2 CUGBS08_RS01995 PF02664 S-Ribosylhomocysteinase (LuxS) CUGBS08_RS02000 PF12072 Domain of unknown function (DUF3552) CUGBS08_RS02000 PF00013 KH domain CUGBS08_RS02000 PF01966 HD domain CUGBS08_RS02005 PF00005 ABC transporter CUGBS08_RS02015 PF07730 Histidine kinase CUGBS08_RS02015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CUGBS08_RS02020 PF00072 Response regulator receiver domain CUGBS08_RS02020 PF00196 Bacterial regulatory proteins, luxR family CUGBS08_RS02025 PF06736 Protein of unknown function (DUF1211) CUGBS08_RS02030 PF00625 Guanylate kinase CUGBS08_RS02035 PF01192 RNA polymerase Rpb6 CUGBS08_RS02040 PF18319 PriA DNA helicase Cys-rich region (CRR) domain CUGBS08_RS02040 PF04851 Type III restriction enzyme, res subunit CUGBS08_RS02040 PF17764 3′ DNA-binding domain (3′BD) CUGBS08_RS02040 PF00271 Helicase conserved C-terminal domain CUGBS08_RS02040 PF18074 Primosomal protein N C-terminal domain CUGBS08_RS02045 PF00551 Formyl transferase CUGBS08_RS02045 PF02911 Formyl transferase, C-terminal domain CUGBS08_RS02050 PF01029 NusB family CUGBS08_RS02050 PF01189 16S rRNA methyltransferase RsmB/F CUGBS08_RS02060 PF03793 PASTA domain CUGBS08_RS02060 PF00069 Protein kinase domain CUGBS08_RS02070 PF07730 Histidine kinase CUGBS08_RS02070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CUGBS08_RS02070 PF00672 HAMP domain CUGBS08_RS02075 PF00196 Bacterial regulatory proteins, luxR family CUGBS08_RS02075 PF00072 Response regulator receiver domain CUGBS08_RS02080 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CUGBS08_RS02085 PF00575 S1 RNA binding domain CUGBS08_RS02090 PF04055 Radical SAM superfamily CUGBS08_RS02095 PF08220 DeoR-like helix-turn-helix domain CUGBS08_RS02095 PF00455 DeoR C terminal sensor domain CUGBS08_RS02100 PF13936 Helix-turn-helix domain CUGBS08_RS02100 PF04198 Putative sugar-binding domain CUGBS08_RS02105 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit CUGBS08_RS02115 PF02378 Phosphotransferase system, EIIC CUGBS08_RS02120 PF02901 Pyruvate formate lyase-like CUGBS08_RS02120 PF01228 Glycine radical CUGBS08_RS02125 PF00923 Transaldolase/Fructose-6-phosphate aldolase CUGBS08_RS02130 PF00465 Iron-containing alcohol dehydrogenase CUGBS08_RS02135 PF00291 Pyridoxal-phosphate dependent enzyme CUGBS08_RS02140 PF01205 Uncharacterized protein family UPF0029 CUGBS08_RS02140 PF09186 Domain of unknown function (DUF1949) CUGBS08_RS02145 PF00271 Helicase conserved C-terminal domain CUGBS08_RS02145 PF04851 Type III restriction enzyme, res subunit CUGBS08_RS02155 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CUGBS08_RS02155 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus CUGBS08_RS02185 PF00696 Amino acid kinase family CUGBS08_RS02185 PF13840 ACT domain CUGBS08_RS02190 PF13419 Haloacid dehalogenase-like hydrolase CUGBS08_RS02195 PF00378 Enoyl-CoA hydratase/isomerase CUGBS08_RS02205 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CUGBS08_RS02205 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CUGBS08_RS02210 PF00550 Phosphopantetheine attachment site CUGBS08_RS02215 PF03060 Nitronate monooxygenase CUGBS08_RS02220 PF00698 Acyl transferase domain CUGBS08_RS02230 PF02801 Beta-ketoacyl synthase, C-terminal domain CUGBS08_RS02230 PF00109 Beta-ketoacyl synthase, N-terminal domain CUGBS08_RS02235 PF00364 Biotin-requiring enzyme CUGBS08_RS02240 PF07977 FabA-like domain CUGBS08_RS02245 PF00289 Biotin carboxylase, N-terminal domain CUGBS08_RS02245 PF02785 Biotin carboxylase C-terminal domain CUGBS08_RS02245 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CUGBS08_RS02250 PF01039 Carboxyl transferase domain CUGBS08_RS02250 PF17848 Acetyl-coA carboxylase zinc finger domain CUGBS08_RS02255 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit CUGBS08_RS02265 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CUGBS08_RS02265 PF02403 Seryl-tRNA synthetase N-terminal domain CUGBS08_RS02280 PF03613 PTS system mannose/fructose/sorbose family IID component CUGBS08_RS02285 PF03609 PTS system sorbose-specific iic component CUGBS08_RS02290 PF03610 PTS system fructose IIA component CUGBS08_RS02290 PF03830 PTS system sorbose subfamily IIB component CUGBS08_RS02310 PF00860 Permease family CUGBS08_RS02315 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE CUGBS08_RS02320 PF13302 Acetyltransferase (GNAT) domain CUGBS08_RS02325 PF03816 Cell envelope-related transcriptional attenuator domain CUGBS08_RS02335 PF01230 HIT domain CUGBS08_RS02350 PF00005 ABC transporter CUGBS08_RS02355 PF05975 Bacterial ABC transporter protein EcsB CUGBS08_RS02365 PF02390 Putative methyltransferase CUGBS08_RS02375 PF17384 RimP C-terminal SH3 domain CUGBS08_RS02375 PF02576 RimP N-terminal domain CUGBS08_RS02380 PF13184 NusA-like KH domain CUGBS08_RS02380 PF08529 NusA N-terminal domain CUGBS08_RS02380 PF00575 S1 RNA binding domain CUGBS08_RS02385 PF04296 Protein of unknown function (DUF448) CUGBS08_RS02390 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family CUGBS08_RS02395 PF00009 Elongation factor Tu GTP binding domain CUGBS08_RS02395 PF11987 Translation-initiation factor 2 CUGBS08_RS02395 PF04760 Translation initiation factor IF-2, N-terminal region CUGBS08_RS02400 PF02033 Ribosome-binding factor A CUGBS08_RS02405 PF07859 alpha/beta hydrolase fold CUGBS08_RS02410 PF03965 Penicillinase repressor CUGBS08_RS02415 PF00403 Heavy-metal-associated domain CUGBS08_RS02425 PF03458 UPF0126 domain CUGBS08_RS02435 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CUGBS08_RS02435 PF01367 5'-3' exonuclease, C-terminal SAM fold CUGBS08_RS02435 PF00476 DNA polymerase family A CUGBS08_RS02440 PF13380 CoA binding domain CUGBS08_RS02445 PF01475 Ferric uptake regulator family CUGBS08_RS02455 PF00486 Transcriptional regulatory protein, C terminal CUGBS08_RS02455 PF00072 Response regulator receiver domain CUGBS08_RS02460 PF00512 His Kinase A (phospho-acceptor) domain CUGBS08_RS02460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CUGBS08_RS02470 PF01702 Queuine tRNA-ribosyltransferase CUGBS08_RS02480 PF02632 BioY family CUGBS08_RS02485 PF12706 Beta-lactamase superfamily domain CUGBS08_RS02490 PF14437 MafB19-like deaminase CUGBS08_RS02500 PF00342 Phosphoglucose isomerase CUGBS08_RS02505 PF01812 5-formyltetrahydrofolate cyclo-ligase family CUGBS08_RS02510 PF01694 Rhomboid family CUGBS08_RS02515 PF02608 ABC transporter substrate-binding protein PnrA-like CUGBS08_RS02520 PF00483 Nucleotidyl transferase CUGBS08_RS02525 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus CUGBS08_RS02525 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus CUGBS08_RS02530 PF00825 Ribonuclease P CUGBS08_RS02535 PF02096 60Kd inner membrane protein CUGBS08_RS02585 PF04167 Protein of unknown function (DUF402) CUGBS08_RS02590 PF02631 RecX family CUGBS08_RS02595 PF05958 tRNA (Uracil-5-)-methyltransferase CUGBS08_RS02595 PF01938 TRAM domain CUGBS08_RS02605 PF13673 Acetyltransferase (GNAT) domain CUGBS08_RS02610 PF06280 Fn3-like domain CUGBS08_RS02610 PF00082 Subtilase family CUGBS08_RS02610 PF02225 PA domain CUGBS08_RS02615 PF01501 Glycosyl transferase family 8 CUGBS08_RS02615 PF00535 Glycosyl transferase family 2 CUGBS08_RS02620 PF00268 Ribonucleotide reductase, small chain CUGBS08_RS02625 PF07972 NrdI Flavodoxin like CUGBS08_RS02630 PF02867 Ribonucleotide reductase, barrel domain CUGBS08_RS02630 PF00317 Ribonucleotide reductase, all-alpha domain CUGBS08_RS02630 PF08343 Ribonucleotide reductase N-terminal CUGBS08_RS02650 PF02627 Carboxymuconolactone decarboxylase family CUGBS08_RS02660 PF13411 MerR HTH family regulatory protein CUGBS08_RS02670 PF00248 Aldo/keto reductase family CUGBS08_RS02675 PF01545 Cation efflux family CUGBS08_RS02685 PF12833 Helix-turn-helix domain CUGBS08_RS02690 PF08829 Alpha C protein N terminal CUGBS08_RS02690 PF17480 AlphaC C-terminal CUGBS08_RS02690 PF00746 LPXTG cell wall anchor motif CUGBS08_RS02690 PF04650 YSIRK type signal peptide CUGBS08_RS02690 PF00746 LPXTG cell wall anchor motif CUGBS08_RS02690 PF17480 AlphaC C-terminal CUGBS08_RS02690 PF08829 Alpha C protein N terminal CUGBS08_RS02690 PF04650 YSIRK type signal peptide CUGBS08_RS02715 PF13649 Methyltransferase domain CUGBS08_RS02720 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CUGBS08_RS02725 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CUGBS08_RS02730 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CUGBS08_RS02735 PF03611 PTS system sugar-specific permease component CUGBS08_RS02740 PF00596 Class II Aldolase and Adducin N-terminal domain CUGBS08_RS02750 PF03611 PTS system sugar-specific permease component CUGBS08_RS02755 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CUGBS08_RS02760 PF12833 Helix-turn-helix domain CUGBS08_RS02760 PF02311 AraC-like ligand binding domain CUGBS08_RS02775 PF01547 Bacterial extracellular solute-binding protein CUGBS08_RS02780 PF00528 Binding-protein-dependent transport system inner membrane component CUGBS08_RS02790 PF16875 Glycosyl hydrolase family 36 N-terminal domain CUGBS08_RS02790 PF16874 Glycosyl hydrolase family 36 C-terminal domain CUGBS08_RS02795 PF00288 GHMP kinases N terminal domain CUGBS08_RS02795 PF08544 GHMP kinases C terminal CUGBS08_RS02795 PF10509 Galactokinase galactose-binding signature CUGBS08_RS02800 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain CUGBS08_RS02800 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain CUGBS08_RS02805 PF16363 GDP-mannose 4,6 dehydratase CUGBS08_RS02810 PF01263 Aldose 1-epimerase CUGBS08_RS02835 PF00133 tRNA synthetases class I (I, L, M and V) CUGBS08_RS02835 PF08264 Anticodon-binding domain of tRNA CUGBS08_RS02835 PF10458 Valyl tRNA synthetase tRNA binding arm CUGBS08_RS02870 PF01867 CRISPR associated protein Cas1 CUGBS08_RS02875 PF09827 CRISPR associated protein Cas2 CUGBS08_RS02880 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CUGBS08_RS02880 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CUGBS08_RS02890 PF04237 YjbR CUGBS08_RS02895 PF03590 Aspartate-ammonia ligase CUGBS08_RS02915 PF01467 Cytidylyltransferase-like CUGBS08_RS02925 PF02872 5'-nucleotidase, C-terminal domain CUGBS08_RS02930 PF06265 Protein of unknown function (DUF1027) CUGBS08_RS02935 PF04055 Radical SAM superfamily CUGBS08_RS02945 PF00664 ABC transporter transmembrane region CUGBS08_RS02945 PF00005 ABC transporter CUGBS08_RS02950 PF00664 ABC transporter transmembrane region CUGBS08_RS02950 PF00005 ABC transporter CUGBS08_RS02955 PF00117 Glutamine amidotransferase class-I CUGBS08_RS02960 PF02632 BioY family CUGBS08_RS02965 PF04055 Radical SAM superfamily CUGBS08_RS02965 PF06968 Biotin and Thiamin Synthesis associated domain CUGBS08_RS02975 PF02803 Thiolase, C-terminal domain CUGBS08_RS02975 PF00108 Thiolase, N-terminal domain CUGBS08_RS02985 PF10576 Iron-sulfur binding domain of endonuclease III CUGBS08_RS02985 PF00633 Helix-hairpin-helix motif CUGBS08_RS02985 PF00730 HhH-GPD superfamily base excision DNA repair protein CUGBS08_RS03000 PF00480 ROK family CUGBS08_RS03005 PF00581 Rhodanese-like domain CUGBS08_RS03010 PF00679 Elongation factor G C-terminus CUGBS08_RS03010 PF14492 Elongation Factor G, domain II CUGBS08_RS03010 PF00009 Elongation factor Tu GTP binding domain CUGBS08_RS03010 PF03144 Elongation factor Tu domain 2 CUGBS08_RS03020 PF08245 Mur ligase middle domain CUGBS08_RS03020 PF02875 Mur ligase family, glutamate ligase domain CUGBS08_RS03025 PF03033 Glycosyltransferase family 28 N-terminal domain CUGBS08_RS03025 PF04101 Glycosyltransferase family 28 C-terminal domain CUGBS08_RS03030 PF08478 POTRA domain, FtsQ-type CUGBS08_RS03035 PF02491 SHS2 domain inserted in FTSA CUGBS08_RS03035 PF11983 Membrane-attachment and polymerisation-promoting switch CUGBS08_RS03040 PF12327 FtsZ family, C-terminal domain CUGBS08_RS03040 PF00091 Tubulin/FtsZ family, GTPase domain CUGBS08_RS03045 PF01168 Alanine racemase, N-terminal domain CUGBS08_RS03050 PF04472 Cell division protein SepF CUGBS08_RS03055 PF02325 YGGT family CUGBS08_RS03060 PF17774 Putative RNA-binding domain in YlmH CUGBS08_RS03060 PF01479 S4 domain CUGBS08_RS03065 PF05103 DivIVA protein CUGBS08_RS03070 PF00133 tRNA synthetases class I (I, L, M and V) CUGBS08_RS03070 PF08264 Anticodon-binding domain of tRNA CUGBS08_RS03080 PF00293 NUDIX domain CUGBS08_RS03085 PF00004 ATPase family associated with various cellular activities (AAA) CUGBS08_RS03085 PF07724 AAA domain (Cdc48 subfamily) CUGBS08_RS03085 PF17871 AAA lid domain CUGBS08_RS03085 PF10431 C-terminal, D2-small domain, of ClpB protein CUGBS08_RS03090 PF08796 Protein of unknown function (DUF1797) CUGBS08_RS03095 PF00528 Binding-protein-dependent transport system inner membrane component CUGBS08_RS03100 PF00005 ABC transporter CUGBS08_RS03105 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CUGBS08_RS03105 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CUGBS08_RS03105 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CUGBS08_RS03105 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CUGBS08_RS03110 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CUGBS08_RS03110 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CUGBS08_RS03115 PF01256 Carbohydrate kinase CUGBS08_RS03120 PF13742 OB-fold nucleic acid binding domain CUGBS08_RS03120 PF02601 Exonuclease VII, large subunit CUGBS08_RS03125 PF02609 Exonuclease VII small subunit CUGBS08_RS03130 PF00348 Polyprenyl synthetase CUGBS08_RS03135 PF01728 FtsJ-like methyltransferase CUGBS08_RS03135 PF01479 S4 domain CUGBS08_RS03140 PF01316 Arginine repressor, DNA binding domain CUGBS08_RS03140 PF02863 Arginine repressor, C-terminal domain CUGBS08_RS03145 PF13476 AAA domain CUGBS08_RS03150 PF02645 Uncharacterised protein, DegV family COG1307 CUGBS08_RS03155 PF13472 GDSL-like Lipase/Acylhydrolase family CUGBS08_RS03165 PF00216 Bacterial DNA-binding protein CUGBS08_RS03175 PF01180 Dihydroorotate dehydrogenase CUGBS08_RS03185 PF02388 FemAB family CUGBS08_RS03190 PF02388 FemAB family CUGBS08_RS03200 PF01966 HD domain CUGBS08_RS03210 PF00690 Cation transporter/ATPase, N-terminus CUGBS08_RS03210 PF00689 Cation transporting ATPase, C-terminus CUGBS08_RS03220 PF06874 Firmicute fructose-1,6-bisphosphatase CUGBS08_RS03225 PF08331 Domain of unknown function (DUF1730) CUGBS08_RS03230 PF00472 RF-1 domain CUGBS08_RS03230 PF03462 PCRF domain CUGBS08_RS03235 PF00005 ABC transporter CUGBS08_RS03240 PF02687 FtsX-like permease family CUGBS08_RS03240 PF18075 FtsX extracellular domain CUGBS08_RS03250 PF00753 Metallo-beta-lactamase superfamily CUGBS08_RS03260 PF04851 Type III restriction enzyme, res subunit CUGBS08_RS03260 PF00929 Exonuclease CUGBS08_RS03260 PF13307 Helicase C-terminal domain CUGBS08_RS03265 PF00155 Aminotransferase class I and II CUGBS08_RS03270 PF00152 tRNA synthetases class II (D, K and N) CUGBS08_RS03270 PF01336 OB-fold nucleic acid binding domain CUGBS08_RS03280 PF01156 Inosine-uridine preferring nucleoside hydrolase CUGBS08_RS03290 PF03668 P-loop ATPase protein family CUGBS08_RS03295 PF01933 Uncharacterised protein family UPF0052 CUGBS08_RS03300 PF10298 WhiA N-terminal LAGLIDADG-like domain CUGBS08_RS03300 PF14527 WhiA LAGLIDADG-like domain CUGBS08_RS03300 PF02650 WhiA C-terminal HTH domain CUGBS08_RS03305 PF03577 Peptidase family C69 CUGBS08_RS03310 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment CUGBS08_RS03310 PF01297 Zinc-uptake complex component A periplasmic CUGBS08_RS03315 PF01197 Ribosomal protein L31 CUGBS08_RS03320 PF01368 DHH family CUGBS08_RS03320 PF02272 DHHA1 domain CUGBS08_RS03325 PF00962 Adenosine/AMP deaminase CUGBS08_RS03330 PF00258 Flavodoxin CUGBS08_RS03335 PF01817 Chorismate mutase type II CUGBS08_RS03335 PF00793 DAHP synthetase I family CUGBS08_RS03340 PF00654 Voltage gated chloride channel CUGBS08_RS03345 PF01245 Ribosomal protein L19 CUGBS08_RS03380 PF00005 ABC transporter CUGBS08_RS03390 PF00486 Transcriptional regulatory protein, C terminal CUGBS08_RS03390 PF00072 Response regulator receiver domain CUGBS08_RS03395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CUGBS08_RS03395 PF00512 His Kinase A (phospho-acceptor) domain CUGBS08_RS03395 PF00672 HAMP domain CUGBS08_RS03400 PF13683 Integrase core domain CUGBS08_RS03400 PF01610 Transposase CUGBS08_RS03405 PF05532 CsbD-like CUGBS08_RS03410 PF01098 Cell cycle protein CUGBS08_RS03420 PF01751 Toprim domain CUGBS08_RS03420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CUGBS08_RS03420 PF00986 DNA gyrase B subunit, carboxyl terminus CUGBS08_RS03420 PF00204 DNA gyrase B CUGBS08_RS03425 PF06160 Septation ring formation regulator, EzrA CUGBS08_RS03445 PF03952 Enolase, N-terminal domain CUGBS08_RS03445 PF00113 Enolase, C-terminal TIM barrel domain CUGBS08_RS03455 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CUGBS08_RS03460 PF01202 Shikimate kinase CUGBS08_RS03465 PF03816 Cell envelope-related transcriptional attenuator domain CUGBS08_RS03470 PF05958 tRNA (Uracil-5-)-methyltransferase CUGBS08_RS03480 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) CUGBS08_RS03500 PF00746 LPXTG cell wall anchor motif CUGBS08_RS03500 PF08829 Alpha C protein N terminal CUGBS08_RS03500 PF04650 YSIRK type signal peptide CUGBS08_RS03500 PF17480 AlphaC C-terminal CUGBS08_RS03505 PF13683 Integrase core domain CUGBS08_RS03505 PF01610 Transposase CUGBS08_RS03515 PF01430 Hsp33 protein CUGBS08_RS03580 PF00144 Beta-lactamase CUGBS08_RS03585 PF00005 ABC transporter CUGBS08_RS03615 PF00550 Phosphopantetheine attachment site CUGBS08_RS03620 PF07977 FabA-like domain CUGBS08_RS03625 PF00005 ABC transporter CUGBS08_RS03640 PF01571 Aminomethyltransferase folate-binding domain CUGBS08_RS03640 PF08669 Glycine cleavage T-protein C-terminal barrel domain CUGBS08_RS03645 PF02801 Beta-ketoacyl synthase, C-terminal domain CUGBS08_RS03645 PF00109 Beta-ketoacyl synthase, N-terminal domain CUGBS08_RS03665 PF08363 Glucan-binding protein C CUGBS08_RS03665 PF16364 Cell surface antigen C-terminus CUGBS08_RS03665 PF17998 Cell surface antigen I/II C2 terminal domain CUGBS08_RS03665 PF18652 Adhesin P1 N-terminal domain CUGBS08_RS03665 PF06696 Streptococcal surface antigen repeat CUGBS08_RS03665 PF00746 LPXTG cell wall anchor motif CUGBS08_RS03670 PF02225 PA domain CUGBS08_RS03670 PF00746 LPXTG cell wall anchor motif CUGBS08_RS03670 PF00082 Subtilase family CUGBS08_RS03670 PF06280 Fn3-like domain CUGBS08_RS03680 PF01431 Peptidase family M13 CUGBS08_RS03680 PF05649 Peptidase family M13 CUGBS08_RS03685 PF01431 Peptidase family M13 CUGBS08_RS03685 PF05649 Peptidase family M13 CUGBS08_RS03730 PF00005 ABC transporter CUGBS08_RS03740 PF01223 DNA/RNA non-specific endonuclease CUGBS08_RS03745 PF09335 SNARE associated Golgi protein CUGBS08_RS03750 PF00005 ABC transporter CUGBS08_RS03755 PF03649 Uncharacterised protein family (UPF0014) CUGBS08_RS03765 PF03466 LysR substrate binding domain CUGBS08_RS03765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CUGBS08_RS03775 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CUGBS08_RS03775 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CUGBS08_RS03785 PF00294 pfkB family carbohydrate kinase CUGBS08_RS03790 PF02837 Glycosyl hydrolases family 2, sugar binding domain CUGBS08_RS03790 PF02836 Glycosyl hydrolases family 2, TIM barrel domain CUGBS08_RS03790 PF00703 Glycosyl hydrolases family 2 CUGBS08_RS03795 PF07729 FCD domain CUGBS08_RS03795 PF00392 Bacterial regulatory proteins, gntR family CUGBS08_RS03800 PF01081 KDPG and KHG aldolase CUGBS08_RS03805 PF02614 Glucuronate isomerase CUGBS08_RS03810 PF03786 D-mannonate dehydratase (UxuA) CUGBS08_RS03815 PF00106 short chain dehydrogenase CUGBS08_RS03825 PF00933 Glycosyl hydrolase family 3 N terminal domain CUGBS08_RS03830 PF00557 Metallopeptidase family M24 CUGBS08_RS03830 PF01321 Creatinase/Prolidase N-terminal domain CUGBS08_RS03835 PF00356 Bacterial regulatory proteins, lacI family CUGBS08_RS03840 PF00128 Alpha amylase, catalytic domain CUGBS08_RS03840 PF09154 Domain of unknown function (DUF1939) CUGBS08_RS03845 PF13439 Glycosyltransferase Family 4 CUGBS08_RS03845 PF00534 Glycosyl transferases group 1 CUGBS08_RS03850 PF13439 Glycosyltransferase Family 4 CUGBS08_RS03850 PF00534 Glycosyl transferases group 1 CUGBS08_RS03855 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CUGBS08_RS03855 PF02824 TGS domain CUGBS08_RS03855 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CUGBS08_RS03855 PF03129 Anticodon binding domain CUGBS08_RS03860 PF00486 Transcriptional regulatory protein, C terminal CUGBS08_RS03860 PF00072 Response regulator receiver domain CUGBS08_RS03870 PF03413 Peptidase propeptide and YPEB domain CUGBS08_RS03875 PF00528 Binding-protein-dependent transport system inner membrane component CUGBS08_RS03880 PF00528 Binding-protein-dependent transport system inner membrane component CUGBS08_RS03885 PF00497 Bacterial extracellular solute-binding proteins, family 3 CUGBS08_RS03890 PF00005 ABC transporter CUGBS08_RS03895 PF00072 Response regulator receiver domain CUGBS08_RS03895 PF00486 Transcriptional regulatory protein, C terminal CUGBS08_RS03900 PF00672 HAMP domain CUGBS08_RS03900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CUGBS08_RS03900 PF00512 His Kinase A (phospho-acceptor) domain CUGBS08_RS03900 PF13426 PAS domain CUGBS08_RS03905 PF00753 Metallo-beta-lactamase superfamily CUGBS08_RS03910 PF04304 Protein of unknown function (DUF454) CUGBS08_RS03915 PF14622 Ribonuclease-III-like CUGBS08_RS03915 PF00035 Double-stranded RNA binding motif CUGBS08_RS03920 PF02463 RecF/RecN/SMC N terminal domain CUGBS08_RS03920 PF06470 SMC proteins Flexible Hinge Domain CUGBS08_RS03935 PF02881 SRP54-type protein, helical bundle domain CUGBS08_RS03935 PF00448 SRP54-type protein, GTPase domain CUGBS08_RS03940 PF09323 Domain of unknown function (DUF1980) CUGBS08_RS03945 PF03773 Predicted permease CUGBS08_RS03960 PF16921 Tex protein YqgF-like domain CUGBS08_RS03960 PF09371 Tex-like protein N-terminal domain CUGBS08_RS03960 PF00575 S1 RNA binding domain CUGBS08_RS03960 PF17674 HHH domain CUGBS08_RS03965 PF10263 SprT-like family CUGBS08_RS03970 PF04024 PspC domain CUGBS08_RS03975 PF02603 HPr Serine kinase N terminus CUGBS08_RS03975 PF07475 HPr Serine kinase C-terminal domain CUGBS08_RS03980 PF01790 Prolipoprotein diacylglyceryl transferase CUGBS08_RS03990 PF12732 YtxH-like protein CUGBS08_RS04005 PF16325 Peptidase family U32 C-terminal domain CUGBS08_RS04005 PF01136 Peptidase family U32 CUGBS08_RS04010 PF02229 Transcriptional Coactivator p15 (PC4) CUGBS08_RS04020 PF01566 Natural resistance-associated macrophage protein CUGBS08_RS04025 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CUGBS08_RS04025 PF01872 RibD C-terminal domain CUGBS08_RS04030 PF00677 Lumazine binding domain CUGBS08_RS04035 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CUGBS08_RS04035 PF00925 GTP cyclohydrolase II CUGBS08_RS04040 PF00885 6,7-dimethyl-8-ribityllumazine synthase CUGBS08_RS04045 PF00152 tRNA synthetases class II (D, K and N) CUGBS08_RS04045 PF01336 OB-fold nucleic acid binding domain CUGBS08_RS04060 PF04073 Aminoacyl-tRNA editing domain CUGBS08_RS04065 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family CUGBS08_RS04085 PF01432 Peptidase family M3 CUGBS08_RS04085 PF08439 Oligopeptidase F CUGBS08_RS04090 PF00311 Phosphoenolpyruvate carboxylase CUGBS08_RS04095 PF01098 Cell cycle protein CUGBS08_RS04100 PF03143 Elongation factor Tu C-terminal domain CUGBS08_RS04100 PF00009 Elongation factor Tu GTP binding domain CUGBS08_RS04100 PF03144 Elongation factor Tu domain 2 CUGBS08_RS04105 PF00121 Triosephosphate isomerase CUGBS08_RS04110 PF00300 Histidine phosphatase superfamily (branch 1) CUGBS08_RS04115 PF03717 Penicillin-binding Protein dimerisation domain CUGBS08_RS04115 PF00905 Penicillin binding protein transpeptidase domain CUGBS08_RS04120 PF02132 RecR protein CUGBS08_RS04120 PF13662 Toprim domain CUGBS08_RS04125 PF01820 D-ala D-ala ligase N-terminus CUGBS08_RS04125 PF07478 D-ala D-ala ligase C-terminus CUGBS08_RS04130 PF02875 Mur ligase family, glutamate ligase domain CUGBS08_RS04130 PF01225 Mur ligase family, catalytic domain CUGBS08_RS04130 PF08245 Mur ligase middle domain CUGBS08_RS04135 PF07690 Major Facilitator Superfamily CUGBS08_RS04150 PF00009 Elongation factor Tu GTP binding domain CUGBS08_RS04150 PF16658 Class II release factor RF3, C-terminal domain CUGBS08_RS04150 PF03144 Elongation factor Tu domain 2 CUGBS08_RS04155 PF08000 Bacterial PH domain CUGBS08_RS04165 PF00528 Binding-protein-dependent transport system inner membrane component CUGBS08_RS04170 PF03180 NLPA lipoprotein CUGBS08_RS04175 PF00270 DEAD/DEAH box helicase CUGBS08_RS04175 PF00271 Helicase conserved C-terminal domain CUGBS08_RS04180 PF01541 GIY-YIG catalytic domain CUGBS08_RS04185 PF05175 Methyltransferase small domain CUGBS08_RS04190 PF01553 Acyltransferase CUGBS08_RS04195 PF10531 SLBB domain CUGBS08_RS04200 PF03772 Competence protein CUGBS08_RS04200 PF13567 Domain of unknown function (DUF4131) CUGBS08_RS04200 PF00753 Metallo-beta-lactamase superfamily CUGBS08_RS04210 PF00356 Bacterial regulatory proteins, lacI family CUGBS08_RS04210 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CUGBS08_RS04215 PF00934 PE family CUGBS08_RS04215 PF07859 alpha/beta hydrolase fold CUGBS08_RS04220 PF01209 ubiE/COQ5 methyltransferase family CUGBS08_RS04230 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CUGBS08_RS04230 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CUGBS08_RS04235 PF00874 PRD domain CUGBS08_RS04235 PF03123 CAT RNA binding domain CUGBS08_RS04240 PF00367 phosphotransferase system, EIIB CUGBS08_RS04240 PF02378 Phosphotransferase system, EIIC CUGBS08_RS04240 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CUGBS08_RS04245 PF00232 Glycosyl hydrolase family 1 CUGBS08_RS04250 PF13556 PucR C-terminal helix-turn-helix domain CUGBS08_RS04250 PF17853 GGDEF-like domain CUGBS08_RS04250 PF05651 Putative sugar diacid recognition CUGBS08_RS04255 PF02595 Glycerate kinase family CUGBS08_RS04260 PF02447 GntP family permease CUGBS08_RS04270 PF01047 MarR family CUGBS08_RS04275 PF02547 Queuosine biosynthesis protein CUGBS08_RS04285 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase CUGBS08_RS04290 PF13409 Glutathione S-transferase, N-terminal domain CUGBS08_RS04295 PF00849 RNA pseudouridylate synthase CUGBS08_RS04295 PF01479 S4 domain CUGBS08_RS04310 PF01432 Peptidase family M3 CUGBS08_RS04310 PF08439 Oligopeptidase F CUGBS08_RS04320 PF01596 O-methyltransferase CUGBS08_RS04325 PF13145 PPIC-type PPIASE domain CUGBS08_RS04330 PF04525 LURP-one-related CUGBS08_RS04335 PF02272 DHHA1 domain CUGBS08_RS04335 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CUGBS08_RS04335 PF01411 tRNA synthetases class II (A) CUGBS08_RS04345 PF01501 Glycosyl transferase family 8 CUGBS08_RS04345 PF08437 Glycosyl transferase family 8 C-terminal CUGBS08_RS04360 PF01381 Helix-turn-helix CUGBS08_RS04370 PF09515 Thiamine transporter protein (Thia_YuaJ) CUGBS08_RS04375 PF00268 Ribonucleotide reductase, small chain CUGBS08_RS04380 PF02867 Ribonucleotide reductase, barrel domain CUGBS08_RS04380 PF00317 Ribonucleotide reductase, all-alpha domain CUGBS08_RS04380 PF08343 Ribonucleotide reductase N-terminal CUGBS08_RS04385 PF00462 Glutaredoxin CUGBS08_RS04390 PF00381 PTS HPr component phosphorylation site CUGBS08_RS04395 PF02896 PEP-utilising enzyme, TIM barrel domain CUGBS08_RS04395 PF05524 PEP-utilising enzyme, N-terminal CUGBS08_RS04395 PF00391 PEP-utilising enzyme, mobile domain CUGBS08_RS04400 PF00171 Aldehyde dehydrogenase family CUGBS08_RS04405 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain CUGBS08_RS04405 PF01522 Polysaccharide deacetylase CUGBS08_RS04410 PF00270 DEAD/DEAH box helicase CUGBS08_RS04410 PF00271 Helicase conserved C-terminal domain CUGBS08_RS04415 PF00485 Phosphoribulokinase / Uridine kinase family CUGBS08_RS04420 PF13185 GAF domain CUGBS08_RS04425 PF12169 DNA polymerase III subunits gamma and tau domain III CUGBS08_RS04435 PF02237 Biotin protein ligase C terminal domain CUGBS08_RS04435 PF03099 Biotin/lipoate A/B protein ligase family CUGBS08_RS04435 PF08279 HTH domain CUGBS08_RS04440 PF00438 S-adenosylmethionine synthetase, N-terminal domain CUGBS08_RS04440 PF02772 S-adenosylmethionine synthetase, central domain CUGBS08_RS04440 PF02773 S-adenosylmethionine synthetase, C-terminal domain CUGBS08_RS04450 PF04022 Staphylocoagulase repeat CUGBS08_RS04450 PF08764 Staphylococcus aureus coagulase CUGBS08_RS04465 PF09819 ABC-type cobalt transport system, permease component CUGBS08_RS04470 PF00005 ABC transporter CUGBS08_RS04480 PF03070 TENA/THI-4/PQQC family CUGBS08_RS04485 PF08543 Phosphomethylpyrimidine kinase CUGBS08_RS04490 PF02110 Hydroxyethylthiazole kinase family CUGBS08_RS04495 PF02581 Thiamine monophosphate synthase CUGBS08_RS04500 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CUGBS08_RS04510 PF03061 Thioesterase superfamily CUGBS08_RS04510 PF00571 CBS domain CUGBS08_RS04510 PF07085 DRTGG domain CUGBS08_RS04510 PF00392 Bacterial regulatory proteins, gntR family CUGBS08_RS04515 PF00557 Metallopeptidase family M24 CUGBS08_RS04525 PF04138 GtrA-like protein CUGBS08_RS04530 PF06177 QueT transporter CUGBS08_RS04535 PF03120 NAD-dependent DNA ligase OB-fold domain CUGBS08_RS04535 PF01653 NAD-dependent DNA ligase adenylation domain CUGBS08_RS04535 PF00533 BRCA1 C Terminus (BRCT) domain CUGBS08_RS04535 PF12826 Helix-hairpin-helix motif CUGBS08_RS04535 PF03119 NAD-dependent DNA ligase C4 zinc finger domain CUGBS08_RS04540 PF00781 Diacylglycerol kinase catalytic domain CUGBS08_RS04545 PF17999 Pullulanase N1-terminal domain CUGBS08_RS04545 PF00128 Alpha amylase, catalytic domain CUGBS08_RS04545 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CUGBS08_RS04550 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CUGBS08_RS04550 PF02806 Alpha amylase, C-terminal all-beta domain CUGBS08_RS04550 PF00128 Alpha amylase, catalytic domain CUGBS08_RS04555 PF00132 Bacterial transferase hexapeptide (six repeats) CUGBS08_RS04555 PF00483 Nucleotidyl transferase CUGBS08_RS04560 PF00483 Nucleotidyl transferase CUGBS08_RS04565 PF00534 Glycosyl transferases group 1 CUGBS08_RS04565 PF08323 Starch synthase catalytic domain CUGBS08_RS04570 PF00137 ATP synthase subunit C CUGBS08_RS04575 PF00119 ATP synthase A chain CUGBS08_RS04580 PF00430 ATP synthase B/B' CF(0) CUGBS08_RS04585 PF00213 ATP synthase delta (OSCP) subunit CUGBS08_RS04590 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CUGBS08_RS04590 PF02874 ATP synthase alpha/beta family, beta-barrel domain CUGBS08_RS04590 PF00306 ATP synthase alpha/beta chain, C terminal domain CUGBS08_RS04595 PF00231 ATP synthase CUGBS08_RS04600 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CUGBS08_RS04600 PF02874 ATP synthase alpha/beta family, beta-barrel domain CUGBS08_RS04605 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain CUGBS08_RS04605 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain CUGBS08_RS04615 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CUGBS08_RS04625 PF01223 DNA/RNA non-specific endonuclease CUGBS08_RS04630 PF01409 tRNA synthetases class II core domain (F) CUGBS08_RS04630 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain CUGBS08_RS04635 PF13673 Acetyltransferase (GNAT) domain CUGBS08_RS04640 PF03147 Ferredoxin-fold anticodon binding domain CUGBS08_RS04640 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain CUGBS08_RS04640 PF03484 tRNA synthetase B5 domain CUGBS08_RS04640 PF03483 B3/4 domain CUGBS08_RS04640 PF01588 Putative tRNA binding domain CUGBS08_RS04645 PF04228 Putative neutral zinc metallopeptidase CUGBS08_RS04650 PF12705 PD-(D/E)XK nuclease superfamily CUGBS08_RS04655 PF13361 UvrD-like helicase C-terminal domain CUGBS08_RS04655 PF00580 UvrD/REP helicase N-terminal domain CUGBS08_RS04655 PF12705 PD-(D/E)XK nuclease superfamily CUGBS08_RS04665 PF12631 MnmE helical domain CUGBS08_RS04665 PF01926 50S ribosome-binding GTPase CUGBS08_RS04665 PF10396 GTP-binding protein TrmE N-terminus CUGBS08_RS04670 PF12848 ABC transporter CUGBS08_RS04670 PF16326 ABC transporter C-terminal domain CUGBS08_RS04670 PF00005 ABC transporter CUGBS08_RS04675 PF00676 Dehydrogenase E1 component CUGBS08_RS04680 PF00364 Biotin-requiring enzyme CUGBS08_RS04680 PF02779 Transketolase, pyrimidine binding domain CUGBS08_RS04680 PF02780 Transketolase, C-terminal domain CUGBS08_RS04685 PF02817 e3 binding domain CUGBS08_RS04685 PF00364 Biotin-requiring enzyme CUGBS08_RS04685 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CUGBS08_RS04690 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CUGBS08_RS04690 PF07992 Pyridine nucleotide-disulphide oxidoreductase CUGBS08_RS04695 PF10437 Bacterial lipoate protein ligase C-terminus CUGBS08_RS04695 PF03099 Biotin/lipoate A/B protein ligase family CUGBS08_RS04700 PF07685 CobB/CobQ-like glutamine amidotransferase domain CUGBS08_RS04705 PF08353 Domain of unknown function (DUF1727) CUGBS08_RS04705 PF08245 Mur ligase middle domain CUGBS08_RS04710 PF02457 DisA bacterial checkpoint controller nucleotide-binding CUGBS08_RS04720 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CUGBS08_RS04720 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CUGBS08_RS04720 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CUGBS08_RS04720 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CUGBS08_RS04735 PF04055 Radical SAM superfamily CUGBS08_RS04735 PF06969 HemN C-terminal domain CUGBS08_RS04745 PF13344 Haloacid dehalogenase-like hydrolase CUGBS08_RS04755 PF16593 Bridge helix of CRISPR-associated endonuclease Cas9 CUGBS08_RS04755 PF13395 HNH endonuclease CUGBS08_RS04755 PF16592 REC lobe of CRISPR-associated endonuclease Cas9 CUGBS08_RS04755 PF16595 PAM-interacting domain of CRISPR-associated endonuclease Cas9 CUGBS08_RS04760 PF01867 CRISPR associated protein Cas1 CUGBS08_RS04765 PF09827 CRISPR associated protein Cas2 CUGBS08_RS04770 PF09711 CRISPR-associated protein (Cas_Csn2) CUGBS08_RS04780 PF00334 Nucleoside diphosphate kinase CUGBS08_RS04785 PF03144 Elongation factor Tu domain 2 CUGBS08_RS04785 PF06421 GTP-binding protein LepA C-terminus CUGBS08_RS04785 PF00009 Elongation factor Tu GTP binding domain CUGBS08_RS04785 PF00679 Elongation factor G C-terminus CUGBS08_RS04795 PF01966 HD domain CUGBS08_RS04800 PF13673 Acetyltransferase (GNAT) domain CUGBS08_RS04805 PF01641 SelR domain CUGBS08_RS04810 PF00689 Cation transporting ATPase, C-terminus CUGBS08_RS04810 PF00690 Cation transporter/ATPase, N-terminus CUGBS08_RS04820 PF00132 Bacterial transferase hexapeptide (six repeats) CUGBS08_RS04840 PF00005 ABC transporter CUGBS08_RS04845 PF00392 Bacterial regulatory proteins, gntR family CUGBS08_RS04850 PF02811 PHP domain CUGBS08_RS04850 PF14579 Helix-hairpin-helix motif CUGBS08_RS04850 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CUGBS08_RS04850 PF01336 OB-fold nucleic acid binding domain CUGBS08_RS04850 PF07733 Bacterial DNA polymerase III alpha NTPase domain CUGBS08_RS04855 PF00365 Phosphofructokinase CUGBS08_RS04860 PF00224 Pyruvate kinase, barrel domain CUGBS08_RS04860 PF02887 Pyruvate kinase, alpha/beta domain CUGBS08_RS04865 PF10502 Signal peptidase, peptidase S26 CUGBS08_RS04870 PF01380 SIS domain CUGBS08_RS04875 PF08274 PhnA Zinc-Ribbon CUGBS08_RS04875 PF03831 PhnA domain CUGBS08_RS04880 PF00528 Binding-protein-dependent transport system inner membrane component CUGBS08_RS04885 PF00005 ABC transporter CUGBS08_RS04895 PF01649 Ribosomal protein S20 CUGBS08_RS04900 PF00485 Phosphoribulokinase / Uridine kinase family CUGBS08_RS04905 PF05175 Methyltransferase small domain CUGBS08_RS04910 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CUGBS08_RS04915 PF02608 ABC transporter substrate-binding protein PnrA-like CUGBS08_RS04920 PF00005 ABC transporter CUGBS08_RS04925 PF02653 Branched-chain amino acid transport system / permease component CUGBS08_RS04930 PF02653 Branched-chain amino acid transport system / permease component CUGBS08_RS04935 PF07992 Pyridine nucleotide-disulphide oxidoreductase CUGBS08_RS04935 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CUGBS08_RS04940 PF00056 lactate/malate dehydrogenase, NAD binding domain CUGBS08_RS04940 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CUGBS08_RS04945 PF00521 DNA gyrase/topoisomerase IV, subunit A CUGBS08_RS04945 PF03989 DNA gyrase C-terminal domain, beta-propeller CUGBS08_RS04950 PF04203 Sortase domain CUGBS08_RS04955 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CUGBS08_RS04965 PF00999 Sodium/hydrogen exchanger family CUGBS08_RS04980 PF00117 Glutamine amidotransferase class-I CUGBS08_RS04980 PF00958 GMP synthase C terminal domain CUGBS08_RS04980 PF02540 NAD synthase CUGBS08_RS04985 PF00392 Bacterial regulatory proteins, gntR family CUGBS08_RS04985 PF07702 UTRA domain CUGBS08_RS04990 PF01134 Glucose inhibited division protein A CUGBS08_RS05000 PF03180 NLPA lipoprotein CUGBS08_RS05010 PF03572 Peptidase family S41 CUGBS08_RS05015 PF00005 ABC transporter CUGBS08_RS05025 PF00486 Transcriptional regulatory protein, C terminal CUGBS08_RS05025 PF00072 Response regulator receiver domain CUGBS08_RS05030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CUGBS08_RS05035 PF13495 Phage integrase, N-terminal SAM-like domain CUGBS08_RS05035 PF00589 Phage integrase family CUGBS08_RS05040 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CUGBS08_RS05055 PF02881 SRP54-type protein, helical bundle domain CUGBS08_RS05055 PF00448 SRP54-type protein, GTPase domain CUGBS08_RS05055 PF02978 Signal peptide binding domain CUGBS08_RS05060 PF04297 Putative helix-turn-helix protein, YlxM / p13 like CUGBS08_RS05065 PF00512 His Kinase A (phospho-acceptor) domain CUGBS08_RS05065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CUGBS08_RS05070 PF00486 Transcriptional regulatory protein, C terminal CUGBS08_RS05070 PF00072 Response regulator receiver domain CUGBS08_RS05075 PF01433 Peptidase family M1 domain CUGBS08_RS05075 PF11838 ERAP1-like C-terminal domain CUGBS08_RS05080 PF01895 PhoU domain CUGBS08_RS05085 PF00005 ABC transporter CUGBS08_RS05090 PF00005 ABC transporter CUGBS08_RS05095 PF00528 Binding-protein-dependent transport system inner membrane component CUGBS08_RS05100 PF00528 Binding-protein-dependent transport system inner membrane component CUGBS08_RS05105 PF12849 PBP superfamily domain CUGBS08_RS05110 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF CUGBS08_RS05110 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF CUGBS08_RS05110 PF01189 16S rRNA methyltransferase RsmB/F CUGBS08_RS05115 PF00459 Inositol monophosphatase family CUGBS08_RS05120 PF05256 Uncharacterised protein family (UPF0223) CUGBS08_RS05125 PF03960 ArsC family CUGBS08_RS05130 PF06574 FAD synthetase CUGBS08_RS05130 PF01687 Riboflavin kinase CUGBS08_RS05135 PF16198 tRNA pseudouridylate synthase B C-terminal domain CUGBS08_RS05135 PF01509 TruB family pseudouridylate synthase (N terminal domain) CUGBS08_RS05165 PF00005 ABC transporter CUGBS08_RS05170 PF01396 Topoisomerase DNA binding C4 zinc finger CUGBS08_RS05170 PF01751 Toprim domain CUGBS08_RS05170 PF01131 DNA topoisomerase CUGBS08_RS05175 PF02481 DNA recombination-mediator protein A CUGBS08_RS05175 PF18255 DNA processing protein A sterile alpha motif domain CUGBS08_RS05180 PF01497 Periplasmic binding protein CUGBS08_RS05185 PF00005 ABC transporter CUGBS08_RS05190 PF01032 FecCD transport family CUGBS08_RS05195 PF01032 FecCD transport family CUGBS08_RS05200 PF14602 Hexapeptide repeat of succinyl-transferase CUGBS08_RS05200 PF12464 Maltose acetyltransferase CUGBS08_RS05205 PF01351 Ribonuclease HII CUGBS08_RS05210 PF01926 50S ribosome-binding GTPase CUGBS08_RS05215 PF03734 L,D-transpeptidase catalytic domain CUGBS08_RS05220 PF02554 Carbon starvation protein CstA CUGBS08_RS05225 PF00072 Response regulator receiver domain CUGBS08_RS05225 PF04397 LytTr DNA-binding domain CUGBS08_RS05230 PF07694 5TMR of 5TMR-LYT CUGBS08_RS05230 PF13492 GAF domain CUGBS08_RS05230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CUGBS08_RS05230 PF06580 Histidine kinase CUGBS08_RS05285 PF12538 DNA transporter CUGBS08_RS05285 PF01580 FtsK/SpoIIIE family CUGBS08_RS05290 PF10140 WXG100 protein secretion system (Wss), protein YukC CUGBS08_RS05310 PF06013 Proteins of 100 residues with WXG CUGBS08_RS05315 PF06013 Proteins of 100 residues with WXG CUGBS08_RS05330 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CUGBS08_RS05330 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CUGBS08_RS05330 PF02142 MGS-like domain CUGBS08_RS05335 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain CUGBS08_RS05335 PF00117 Glutamine amidotransferase class-I CUGBS08_RS05340 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CUGBS08_RS05340 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CUGBS08_RS05345 PF01979 Amidohydrolase family CUGBS08_RS05350 PF00156 Phosphoribosyl transferase domain CUGBS08_RS05355 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CUGBS08_RS05365 PF12848 ABC transporter CUGBS08_RS05365 PF00005 ABC transporter CUGBS08_RS05385 PF13091 PLD-like domain CUGBS08_RS05390 PF01268 Formate--tetrahydrofolate ligase CUGBS08_RS05395 PF10437 Bacterial lipoate protein ligase C-terminus CUGBS08_RS05395 PF03099 Biotin/lipoate A/B protein ligase family CUGBS08_RS05405 PF01661 Macro domain CUGBS08_RS05410 PF01597 Glycine cleavage H-protein CUGBS08_RS05420 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CUGBS08_RS05425 PF03099 Biotin/lipoate A/B protein ligase family CUGBS08_RS05435 PF02441 Flavoprotein CUGBS08_RS05440 PF12822 ECF transporter, substrate-specific component CUGBS08_RS05445 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CUGBS08_RS05445 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CUGBS08_RS05445 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CUGBS08_RS05445 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CUGBS08_RS05455 PF00664 ABC transporter transmembrane region CUGBS08_RS05455 PF00005 ABC transporter CUGBS08_RS05460 PF00664 ABC transporter transmembrane region CUGBS08_RS05460 PF00005 ABC transporter CUGBS08_RS05475 PF00464 Serine hydroxymethyltransferase CUGBS08_RS05480 PF01300 Telomere recombination CUGBS08_RS05485 PF05175 Methyltransferase small domain CUGBS08_RS05490 PF00472 RF-1 domain CUGBS08_RS05490 PF03462 PCRF domain CUGBS08_RS05495 PF00265 Thymidine kinase CUGBS08_RS05500 PF01361 Tautomerase enzyme CUGBS08_RS05505 PF02424 ApbE family CUGBS08_RS05510 PF00890 FAD binding domain CUGBS08_RS05510 PF04205 FMN-binding domain CUGBS08_RS05510 PF03358 NADPH-dependent FMN reductase CUGBS08_RS05515 PF03358 NADPH-dependent FMN reductase CUGBS08_RS05515 PF04205 FMN-binding domain CUGBS08_RS05515 PF00890 FAD binding domain CUGBS08_RS05525 PF00860 Permease family CUGBS08_RS05530 PF00156 Phosphoribosyl transferase domain CUGBS08_RS05535 PF00478 IMP dehydrogenase / GMP reductase domain CUGBS08_RS05540 PF07690 Major Facilitator Superfamily CUGBS08_RS05550 PF02705 K+ potassium transporter CUGBS08_RS05555 PF00106 short chain dehydrogenase CUGBS08_RS05560 PF01515 Phosphate acetyl/butaryl transferase CUGBS08_RS05565 PF00849 RNA pseudouridylate synthase CUGBS08_RS05570 PF01513 ATP-NAD kinase CUGBS08_RS05575 PF04607 Region found in RelA / SpoT proteins CUGBS08_RS05585 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CUGBS08_RS05585 PF14572 Phosphoribosyl synthetase-associated domain CUGBS08_RS05590 PF00266 Aminotransferase class-V CUGBS08_RS05600 PF02629 CoA binding domain CUGBS08_RS05600 PF06971 Putative DNA-binding protein N-terminus CUGBS08_RS05605 PF04002 RadC-like JAB domain CUGBS08_RS05610 PF01594 AI-2E family transporter CUGBS08_RS05615 PF00232 Glycosyl hydrolase family 1 CUGBS08_RS05630 PF12852 Cupin CUGBS08_RS05630 PF12833 Helix-turn-helix domain CUGBS08_RS05635 PF00654 Voltage gated chloride channel CUGBS08_RS05640 PF13416 Bacterial extracellular solute-binding protein CUGBS08_RS05645 PF00528 Binding-protein-dependent transport system inner membrane component CUGBS08_RS05650 PF00528 Binding-protein-dependent transport system inner membrane component CUGBS08_RS05655 PF00005 ABC transporter CUGBS08_RS05655 PF08402 TOBE domain CUGBS08_RS05660 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain CUGBS08_RS05660 PF01565 FAD binding domain CUGBS08_RS05665 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) CUGBS08_RS05670 PF02152 Dihydroneopterin aldolase CUGBS08_RS05675 PF00809 Pterin binding enzyme CUGBS08_RS05680 PF01227 GTP cyclohydrolase I CUGBS08_RS05685 PF08245 Mur ligase middle domain CUGBS08_RS05685 PF02875 Mur ligase family, glutamate ligase domain CUGBS08_RS05690 PF00892 EamA-like transporter family CUGBS08_RS05695 PF00288 GHMP kinases N terminal domain CUGBS08_RS05695 PF08544 GHMP kinases C terminal CUGBS08_RS05700 PF00742 Homoserine dehydrogenase CUGBS08_RS05700 PF03447 Homoserine dehydrogenase, NAD binding domain CUGBS08_RS05705 PF01522 Polysaccharide deacetylase CUGBS08_RS05710 PF02028 BCCT, betaine/carnitine/choline family transporter CUGBS08_RS05730 PF00171 Aldehyde dehydrogenase family CUGBS08_RS05735 PF03601 Conserved hypothetical protein 698 CUGBS08_RS05765 PF08534 Redoxin CUGBS08_RS05785 PF03780 Asp23 family, cell envelope-related function CUGBS08_RS05790 PF05532 CsbD-like CUGBS08_RS05795 PF03780 Asp23 family, cell envelope-related function CUGBS08_RS05810 PF04226 Transglycosylase associated protein CUGBS08_RS05820 PF13361 UvrD-like helicase C-terminal domain CUGBS08_RS05820 PF00580 UvrD/REP helicase N-terminal domain CUGBS08_RS05830 PF00860 Permease family CUGBS08_RS05835 PF01235 Sodium:alanine symporter family CUGBS08_RS05840 PF16916 Dimerisation domain of Zinc Transporter CUGBS08_RS05840 PF01545 Cation efflux family CUGBS08_RS05845 PF03788 LrgA family CUGBS08_RS05850 PF04172 LrgB-like family CUGBS08_RS05865 PF00575 S1 RNA binding domain CUGBS08_RS05885 PF01063 Amino-transferase class IV CUGBS08_RS05890 PF00521 DNA gyrase/topoisomerase IV, subunit A CUGBS08_RS05890 PF03989 DNA gyrase C-terminal domain, beta-propeller CUGBS08_RS05895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CUGBS08_RS05895 PF00204 DNA gyrase B CUGBS08_RS05895 PF01751 Toprim domain CUGBS08_RS05895 PF00986 DNA gyrase B subunit, carboxyl terminus CUGBS08_RS05900 PF02660 Glycerol-3-phosphate acyltransferase CUGBS08_RS05915 PF03167 Uracil DNA glycosylase superfamily CUGBS08_RS05925 PF13472 GDSL-like Lipase/Acylhydrolase family CUGBS08_RS05925 PF02348 Cytidylyltransferase CUGBS08_RS05935 PF02350 UDP-N-acetylglucosamine 2-epimerase CUGBS08_RS05940 PF03102 NeuB family CUGBS08_RS05940 PF08666 SAF domain CUGBS08_RS05945 PF01943 Polysaccharide biosynthesis protein CUGBS08_RS05955 PF00535 Glycosyl transferase family 2 CUGBS08_RS05955 PF01501 Glycosyl transferase family 8 CUGBS08_RS05960 PF00535 Glycosyl transferase family 2 CUGBS08_RS05960 PF01501 Glycosyl transferase family 8 CUGBS08_RS05975 PF04101 Glycosyltransferase family 28 C-terminal domain CUGBS08_RS05975 PF03033 Glycosyltransferase family 28 N-terminal domain CUGBS08_RS05980 PF02397 Bacterial sugar transferase CUGBS08_RS05985 PF13614 AAA domain CUGBS08_RS05990 PF02706 Chain length determinant protein CUGBS08_RS06000 PF03816 Cell envelope-related transcriptional attenuator domain CUGBS08_RS06005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CUGBS08_RS06005 PF03466 LysR substrate binding domain CUGBS08_RS06015 PF01048 Phosphorylase superfamily CUGBS08_RS06020 PF00654 Voltage gated chloride channel CUGBS08_RS06025 PF01048 Phosphorylase superfamily CUGBS08_RS06030 PF03960 ArsC family CUGBS08_RS06035 PF01676 Metalloenzyme superfamily CUGBS08_RS06040 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) CUGBS08_RS06050 PF00756 Putative esterase CUGBS08_RS06055 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain CUGBS08_RS06055 PF17770 Ribonuclease J C-terminal domain CUGBS08_RS06055 PF00753 Metallo-beta-lactamase superfamily CUGBS08_RS06060 PF08402 TOBE domain CUGBS08_RS06060 PF00005 ABC transporter CUGBS08_RS06075 PF05670 NFACT protein RNA binding domain CUGBS08_RS06080 PF03306 Alpha-acetolactate decarboxylase CUGBS08_RS06085 PF00205 Thiamine pyrophosphate enzyme, central domain CUGBS08_RS06085 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CUGBS08_RS06085 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CUGBS08_RS06095 PF01594 AI-2E family transporter CUGBS08_RS06105 PF00293 NUDIX domain CUGBS08_RS06110 PF02278 Polysaccharide lyase family 8, super-sandwich domain CUGBS08_RS06110 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain CUGBS08_RS06110 PF08124 Polysaccharide lyase family 8, N terminal alpha-helical domain CUGBS08_RS06115 PF16363 GDP-mannose 4,6 dehydratase CUGBS08_RS06120 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase CUGBS08_RS06125 PF00483 Nucleotidyl transferase CUGBS08_RS06130 PF01266 FAD dependent oxidoreductase CUGBS08_RS06135 PF01784 NIF3 (NGG1p interacting factor 3) CUGBS08_RS06140 PF04816 tRNA (adenine(22)-N(1))-methyltransferase CUGBS08_RS06150 PF00156 Phosphoribosyl transferase domain CUGBS08_RS06160 PF02272 DHHA1 domain CUGBS08_RS06160 PF01368 DHH family CUGBS08_RS06160 PF10141 Single-strand DNA-specific exonuclease, C terminal domain CUGBS08_RS06160 PF17768 RecJ OB domain CUGBS08_RS06165 PF00106 short chain dehydrogenase CUGBS08_RS06170 PF12706 Beta-lactamase superfamily domain CUGBS08_RS06170 PF00753 Metallo-beta-lactamase superfamily CUGBS08_RS06180 PF01926 50S ribosome-binding GTPase CUGBS08_RS06180 PF13167 GTP-binding GTPase N-terminal CUGBS08_RS06180 PF16360 GTP-binding GTPase Middle Region CUGBS08_RS06200 PF03714 Bacterial pullanase-associated domain CUGBS08_RS06200 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CUGBS08_RS06200 PF17967 Pullulanase N2 domain CUGBS08_RS06200 PF11852 Domain of unknown function (DUF3372) CUGBS08_RS06200 PF18494 Pullulanase Ins domain CUGBS08_RS06210 PF03167 Uracil DNA glycosylase superfamily CUGBS08_RS06215 PF01546 Peptidase family M20/M25/M40 CUGBS08_RS06220 PF00881 Nitroreductase family CUGBS08_RS06225 PF03009 Glycerophosphoryl diester phosphodiesterase family CUGBS08_RS06230 PF08459 UvrC Helix-hairpin-helix N-terminal CUGBS08_RS06230 PF02151 UvrB/uvrC motif CUGBS08_RS06230 PF01541 GIY-YIG catalytic domain CUGBS08_RS06235 PF02677 Epoxyqueuosine reductase QueH CUGBS08_RS06240 PF01554 MatE CUGBS08_RS06275 PF13276 HTH-like domain CUGBS08_RS06275 PF13333 Integrase core domain CUGBS08_RS06275 PF00665 Integrase core domain CUGBS08_RS06285 PF01297 Zinc-uptake complex component A periplasmic CUGBS08_RS06290 PF00082 Subtilase family CUGBS08_RS06290 PF06280 Fn3-like domain CUGBS08_RS06290 PF02225 PA domain CUGBS08_RS06310 PF11490 DNA polymerase III polC-type N-terminus II CUGBS08_RS06310 PF14579 Helix-hairpin-helix motif CUGBS08_RS06310 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CUGBS08_RS06310 PF07733 Bacterial DNA polymerase III alpha NTPase domain CUGBS08_RS06310 PF02811 PHP domain CUGBS08_RS06310 PF00929 Exonuclease CUGBS08_RS06320 PF13495 Phage integrase, N-terminal SAM-like domain CUGBS08_RS06320 PF00589 Phage integrase family CUGBS08_RS06375 PF16320 Ribosomal protein L7/L12 dimerisation domain CUGBS08_RS06375 PF00542 Ribosomal protein L7/L12 C-terminal domain CUGBS08_RS06380 PF00466 Ribosomal protein L10 CUGBS08_RS06385 PF10431 C-terminal, D2-small domain, of ClpB protein CUGBS08_RS06385 PF17871 AAA lid domain CUGBS08_RS06385 PF07724 AAA domain (Cdc48 subfamily) CUGBS08_RS06385 PF00004 ATPase family associated with various cellular activities (AAA) CUGBS08_RS06390 PF02574 Homocysteine S-methyltransferase CUGBS08_RS06395 PF00324 Amino acid permease CUGBS08_RS06415 PF01926 50S ribosome-binding GTPase CUGBS08_RS06420 PF10431 C-terminal, D2-small domain, of ClpB protein CUGBS08_RS06420 PF06689 ClpX C4-type zinc finger CUGBS08_RS06420 PF07724 AAA domain (Cdc48 subfamily) CUGBS08_RS06430 PF00186 Dihydrofolate reductase CUGBS08_RS06435 PF00303 Thymidylate synthase CUGBS08_RS06440 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal CUGBS08_RS06440 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal CUGBS08_RS06445 PF00368 Hydroxymethylglutaryl-coenzyme A reductase CUGBS08_RS06455 PF03006 Haemolysin-III related CUGBS08_RS06460 PF00781 Diacylglycerol kinase catalytic domain CUGBS08_RS06475 PF01070 FMN-dependent dehydrogenase CUGBS08_RS06480 PF08544 GHMP kinases C terminal CUGBS08_RS06480 PF00288 GHMP kinases N terminal domain CUGBS08_RS06490 PF08544 GHMP kinases C terminal CUGBS08_RS06490 PF10509 Galactokinase galactose-binding signature CUGBS08_RS06490 PF00288 GHMP kinases N terminal domain CUGBS08_RS06495 PF00512 His Kinase A (phospho-acceptor) domain CUGBS08_RS06495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CUGBS08_RS06500 PF00486 Transcriptional regulatory protein, C terminal CUGBS08_RS06500 PF00072 Response regulator receiver domain CUGBS08_RS06505 PF04607 Region found in RelA / SpoT proteins CUGBS08_RS06510 PF00005 ABC transporter CUGBS08_RS06510 PF00664 ABC transporter transmembrane region CUGBS08_RS06515 PF00005 ABC transporter CUGBS08_RS06515 PF00664 ABC transporter transmembrane region CUGBS08_RS06525 PF02872 5'-nucleotidase, C-terminal domain CUGBS08_RS06525 PF17936 Bacterial Ig domain CUGBS08_RS06525 PF00149 Calcineurin-like phosphoesterase CUGBS08_RS06530 PF01327 Polypeptide deformylase CUGBS08_RS06535 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CUGBS08_RS06535 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CUGBS08_RS06545 PF00005 ABC transporter CUGBS08_RS06545 PF00664 ABC transporter transmembrane region CUGBS08_RS06550 PF00664 ABC transporter transmembrane region CUGBS08_RS06550 PF00005 ABC transporter CUGBS08_RS06560 PF16326 ABC transporter C-terminal domain CUGBS08_RS06560 PF12848 ABC transporter CUGBS08_RS06560 PF00005 ABC transporter CUGBS08_RS06565 PF13735 tRNA nucleotidyltransferase domain 2 putative CUGBS08_RS06565 PF01743 Poly A polymerase head domain CUGBS08_RS06565 PF12627 Probable RNA and SrmB- binding site of polymerase A CUGBS08_RS06570 PF02645 Uncharacterised protein, DegV family COG1307 CUGBS08_RS06590 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CUGBS08_RS06590 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CUGBS08_RS06595 PF00294 pfkB family carbohydrate kinase CUGBS08_RS06600 PF00455 DeoR C terminal sensor domain CUGBS08_RS06600 PF08220 DeoR-like helix-turn-helix domain CUGBS08_RS06615 PF08546 Ketopantoate reductase PanE/ApbA C terminal CUGBS08_RS06615 PF02558 Ketopantoate reductase PanE/ApbA CUGBS08_RS06625 PF07992 Pyridine nucleotide-disulphide oxidoreductase CUGBS08_RS06630 PF01746 tRNA (Guanine-1)-methyltransferase CUGBS08_RS06635 PF05239 PRC-barrel domain CUGBS08_RS06635 PF01782 RimM N-terminal domain CUGBS08_RS06660 PF00886 Ribosomal protein S16 CUGBS08_RS06665 PF02687 FtsX-like permease family CUGBS08_RS06665 PF12704 MacB-like periplasmic core domain CUGBS08_RS06670 PF00005 ABC transporter CUGBS08_RS06675 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CUGBS08_RS06680 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CUGBS08_RS06680 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CUGBS08_RS06680 PF02142 MGS-like domain CUGBS08_RS06685 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain CUGBS08_RS06685 PF00117 Glutamine amidotransferase class-I CUGBS08_RS06690 PF00156 Phosphoribosyl transferase domain CUGBS08_RS06695 PF01479 S4 domain CUGBS08_RS06695 PF00849 RNA pseudouridylate synthase CUGBS08_RS06700 PF01252 Signal peptidase (SPase) II CUGBS08_RS06705 PF03466 LysR substrate binding domain CUGBS08_RS06705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CUGBS08_RS06710 PF01016 Ribosomal L27 protein CUGBS08_RS06720 PF00829 Ribosomal prokaryotic L21 protein CUGBS08_RS06730 PF02568 Thiamine biosynthesis protein (ThiI) CUGBS08_RS06730 PF02926 THUMP domain CUGBS08_RS06735 PF00266 Aminotransferase class-V CUGBS08_RS06745 PF07992 Pyridine nucleotide-disulphide oxidoreductase CUGBS08_RS06745 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CUGBS08_RS06750 PF06133 Control of competence regulator ComK, YlbF/YmcA CUGBS08_RS06755 PF01264 Chorismate synthase CUGBS08_RS06760 PF01761 3-dehydroquinate synthase CUGBS08_RS06765 PF01487 Type I 3-dehydroquinase CUGBS08_RS06770 PF17785 PUA-like domain CUGBS08_RS06770 PF10672 S-adenosylmethionine-dependent methyltransferase CUGBS08_RS06775 PF00884 Sulfatase CUGBS08_RS06780 PF00453 Ribosomal protein L20 CUGBS08_RS06785 PF01632 Ribosomal protein L35 CUGBS08_RS06790 PF05198 Translation initiation factor IF-3, N-terminal domain CUGBS08_RS06790 PF00707 Translation initiation factor IF-3, C-terminal domain CUGBS08_RS06795 PF02224 Cytidylate kinase CUGBS08_RS06815 PF01546 Peptidase family M20/M25/M40 CUGBS08_RS06815 PF07687 Peptidase dimerisation domain CUGBS08_RS06820 PF01943 Polysaccharide biosynthesis protein CUGBS08_RS06820 PF14667 Polysaccharide biosynthesis C-terminal domain CUGBS08_RS06825 PF02875 Mur ligase family, glutamate ligase domain CUGBS08_RS06825 PF08245 Mur ligase middle domain CUGBS08_RS06830 PF00005 ABC transporter CUGBS08_RS06835 PF01497 Periplasmic binding protein CUGBS08_RS06840 PF01032 FecCD transport family CUGBS08_RS06845 PF01032 FecCD transport family CUGBS08_RS06855 PF02833 DHHA2 domain CUGBS08_RS06855 PF01368 DHH family CUGBS08_RS06860 PF04055 Radical SAM superfamily CUGBS08_RS06865 PF03471 Transporter associated domain CUGBS08_RS06865 PF01595 Cyclin M transmembrane N-terminal domain CUGBS08_RS06865 PF00571 CBS domain CUGBS08_RS06870 PF06962 Putative rRNA methylase CUGBS08_RS06875 PF04055 Radical SAM superfamily CUGBS08_RS06875 PF16199 Radical_SAM C-terminal domain CUGBS08_RS06880 PF01569 PAP2 superfamily CUGBS08_RS06885 PF12822 ECF transporter, substrate-specific component CUGBS08_RS06920 PF08323 Starch synthase catalytic domain CUGBS08_RS06920 PF00534 Glycosyl transferases group 1 CUGBS08_RS06925 PF00535 Glycosyl transferase family 2 CUGBS08_RS06930 PF14667 Polysaccharide biosynthesis C-terminal domain CUGBS08_RS06930 PF01943 Polysaccharide biosynthesis protein CUGBS08_RS06940 PF00535 Glycosyl transferase family 2 CUGBS08_RS06945 PF00535 Glycosyl transferase family 2 CUGBS08_RS06945 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 CUGBS08_RS06955 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CUGBS08_RS06960 PF04991 LicD family CUGBS08_RS06975 PF00535 Glycosyl transferase family 2 CUGBS08_RS06980 PF00535 Glycosyl transferase family 2 CUGBS08_RS06990 PF04321 RmlD substrate binding domain CUGBS08_RS06995 PF01883 Iron-sulfur cluster assembly protein CUGBS08_RS07000 PF03979 Sigma-70 factor, region 1.1 CUGBS08_RS07000 PF04539 Sigma-70 region 3 CUGBS08_RS07000 PF04545 Sigma-70, region 4 CUGBS08_RS07000 PF00140 Sigma-70 factor, region 1.2 CUGBS08_RS07000 PF04542 Sigma-70 region 2 CUGBS08_RS07005 PF10410 DnaB-helicase binding domain of primase CUGBS08_RS07005 PF08275 DNA primase catalytic core, N-terminal domain CUGBS08_RS07005 PF01807 CHC2 zinc finger CUGBS08_RS07010 PF01741 Large-conductance mechanosensitive channel, MscL CUGBS08_RS07015 PF01165 Ribosomal protein S21 CUGBS08_RS07025 PF00497 Bacterial extracellular solute-binding proteins, family 3 CUGBS08_RS07030 PF00909 Ammonium Transporter Family CUGBS08_RS07040 PF17773 UPF0176 acylphosphatase like domain CUGBS08_RS07040 PF00581 Rhodanese-like domain CUGBS08_RS07040 PF12368 Rhodanase C-terminal CUGBS08_RS07050 PF07690 Major Facilitator Superfamily CUGBS08_RS07055 PF00343 Carbohydrate phosphorylase CUGBS08_RS07060 PF02446 4-alpha-glucanotransferase CUGBS08_RS07065 PF00356 Bacterial regulatory proteins, lacI family CUGBS08_RS07065 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CUGBS08_RS07075 PF00528 Binding-protein-dependent transport system inner membrane component CUGBS08_RS07080 PF00528 Binding-protein-dependent transport system inner membrane component CUGBS08_RS07085 PF00854 POT family CUGBS08_RS07090 PF13344 Haloacid dehalogenase-like hydrolase CUGBS08_RS07090 PF00293 NUDIX domain CUGBS08_RS07105 PF00534 Glycosyl transferases group 1 CUGBS08_RS07110 PF07516 SecA Wing and Scaffold domain CUGBS08_RS07110 PF01043 SecA preprotein cross-linking domain CUGBS08_RS07110 PF07517 SecA DEAD-like domain CUGBS08_RS07120 PF16929 Accessory Sec system GspB-transporter CUGBS08_RS07125 PF16993 Accessory Sec system protein Asp1 CUGBS08_RS07130 PF00344 SecY translocase CUGBS08_RS07135 PF08759 Glycosyltransferase GT-D fold CUGBS08_RS07135 PF01501 Glycosyl transferase family 8 CUGBS08_RS07140 PF00535 Glycosyl transferase family 2 CUGBS08_RS07140 PF01501 Glycosyl transferase family 8 CUGBS08_RS07145 PF08759 Glycosyltransferase GT-D fold CUGBS08_RS07145 PF01501 Glycosyl transferase family 8 CUGBS08_RS07150 PF01501 Glycosyl transferase family 8 CUGBS08_RS07150 PF00535 Glycosyl transferase family 2 CUGBS08_RS07155 PF08759 Glycosyltransferase GT-D fold CUGBS08_RS07155 PF01501 Glycosyl transferase family 8 CUGBS08_RS07165 PF04650 YSIRK type signal peptide CUGBS08_RS07165 PF17961 Bacterial Ig domain CUGBS08_RS07165 PF17210 SdrD B-like domain CUGBS08_RS07165 PF00746 LPXTG cell wall anchor motif CUGBS08_RS07165 PF10425 C-terminus of bacterial fibrinogen-binding adhesin CUGBS08_RS07175 PF17757 UvrB interaction domain CUGBS08_RS07175 PF00271 Helicase conserved C-terminal domain CUGBS08_RS07175 PF04851 Type III restriction enzyme, res subunit CUGBS08_RS07175 PF02151 UvrB/uvrC motif CUGBS08_RS07175 PF12344 Ultra-violet resistance protein B CUGBS08_RS07185 PF00528 Binding-protein-dependent transport system inner membrane component CUGBS08_RS07190 PF00005 ABC transporter CUGBS08_RS07205 PF01926 50S ribosome-binding GTPase CUGBS08_RS07205 PF01018 GTP1/OBG CUGBS08_RS07205 PF09269 Domain of unknown function (DUF1967) CUGBS08_RS07215 PF02073 Thermophilic metalloprotease (M29) CUGBS08_RS07225 PF01425 Amidase CUGBS08_RS07230 PF00849 RNA pseudouridylate synthase CUGBS08_RS07230 PF01479 S4 domain CUGBS08_RS07235 PF00248 Aldo/keto reductase family CUGBS08_RS07240 PF00881 Nitroreductase family CUGBS08_RS07245 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CUGBS08_RS07250 PF00535 Glycosyl transferase family 2 CUGBS08_RS07255 PF00324 Amino acid permease CUGBS08_RS07260 PF01668 SmpB protein CUGBS08_RS07265 PF17876 Cold shock domain CUGBS08_RS07265 PF00575 S1 RNA binding domain CUGBS08_RS07265 PF08206 Ribonuclease B OB domain CUGBS08_RS07265 PF00773 RNB domain CUGBS08_RS07275 PF00083 Sugar (and other) transporter CUGBS08_RS07275 PF07690 Major Facilitator Superfamily CUGBS08_RS07285 PF00005 ABC transporter CUGBS08_RS07285 PF13732 Domain of unknown function (DUF4162) CUGBS08_RS07290 PF01121 Dephospho-CoA kinase CUGBS08_RS07295 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain CUGBS08_RS07295 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain CUGBS08_RS07295 PF06827 Zinc finger found in FPG and IleRS CUGBS08_RS07300 PF01381 Helix-turn-helix CUGBS08_RS07335 PF07650 KH domain CUGBS08_RS07335 PF01926 50S ribosome-binding GTPase CUGBS08_RS07340 PF01219 Prokaryotic diacylglycerol kinase CUGBS08_RS07345 PF02130 Uncharacterized protein family UPF0054 CUGBS08_RS07355 PF00293 NUDIX domain CUGBS08_RS07355 PF13344 Haloacid dehalogenase-like hydrolase CUGBS08_RS07365 PF02562 PhoH-like protein CUGBS08_RS07370 PF06100 MCRA family CUGBS08_RS07375 PF06855 YozE SAM-like fold CUGBS08_RS07380 PF01625 Peptide methionine sulfoxide reductase CUGBS08_RS07390 PF01765 Ribosome recycling factor CUGBS08_RS07395 PF00696 Amino acid kinase family CUGBS08_RS07400 PF00005 ABC transporter CUGBS08_RS07405 PF00005 ABC transporter CUGBS08_RS07405 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CUGBS08_RS07410 PF00528 Binding-protein-dependent transport system inner membrane component CUGBS08_RS07410 PF12911 N-terminal TM domain of oligopeptide transport permease C CUGBS08_RS07415 PF00528 Binding-protein-dependent transport system inner membrane component CUGBS08_RS07420 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CUGBS08_RS07425 PF00687 Ribosomal protein L1p/L10e family CUGBS08_RS07430 PF00298 Ribosomal protein L11, RNA binding domain CUGBS08_RS07430 PF03946 Ribosomal protein L11, N-terminal domain CUGBS08_RS07435 PF07690 Major Facilitator Superfamily CUGBS08_RS07440 PF01546 Peptidase family M20/M25/M40 CUGBS08_RS07440 PF07687 Peptidase dimerisation domain CUGBS08_RS07445 PF03466 LysR substrate binding domain CUGBS08_RS07445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CUGBS08_RS07455 PF00425 chorismate binding enzyme CUGBS08_RS07455 PF04715 Anthranilate synthase component I, N terminal region CUGBS08_RS07460 PF01580 FtsK/SpoIIIE family CUGBS08_RS07460 PF17854 FtsK alpha domain CUGBS08_RS07460 PF09397 Ftsk gamma domain CUGBS08_RS07465 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CUGBS08_RS07470 PF00950 ABC 3 transport family CUGBS08_RS07475 PF00005 ABC transporter CUGBS08_RS07480 PF01297 Zinc-uptake complex component A periplasmic CUGBS08_RS07490 PF01048 Phosphorylase superfamily CUGBS08_RS07500 PF00293 NUDIX domain CUGBS08_RS07505 PF00132 Bacterial transferase hexapeptide (six repeats) CUGBS08_RS07505 PF14602 Hexapeptide repeat of succinyl-transferase CUGBS08_RS07505 PF12804 MobA-like NTP transferase domain CUGBS08_RS07520 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CUGBS08_RS07520 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CUGBS08_RS07560 PF00535 Glycosyl transferase family 2 CUGBS08_RS07585 PF05525 Branched-chain amino acid transport protein CUGBS08_RS07590 PF09334 tRNA synthetases class I (M) CUGBS08_RS07590 PF01588 Putative tRNA binding domain CUGBS08_RS07595 PF03848 Tellurite resistance protein TehB CUGBS08_RS07595 PF09313 Domain of unknown function (DUF1971) CUGBS08_RS07605 PF02378 Phosphotransferase system, EIIC CUGBS08_RS07615 PF03372 Endonuclease/Exonuclease/phosphatase family CUGBS08_RS07620 PF03960 ArsC family CUGBS08_RS07625 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CUGBS08_RS07625 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CUGBS08_RS07630 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CUGBS08_RS07630 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CUGBS08_RS07640 PF00266 Aminotransferase class-V CUGBS08_RS07645 PF03932 CutC family CUGBS08_RS07650 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CUGBS08_RS07655 PF06156 Initiation control protein YabA CUGBS08_RS07660 PF09115 DNA polymerase III, delta subunit, C terminal CUGBS08_RS07665 PF02223 Thymidylate kinase CUGBS08_RS07670 PF00571 CBS domain CUGBS08_RS07675 PF00005 ABC transporter CUGBS08_RS07680 PF12399 Branched-chain amino acid ATP-binding cassette transporter CUGBS08_RS07680 PF00005 ABC transporter CUGBS08_RS07685 PF11862 Domain of unknown function (DUF3382) CUGBS08_RS07685 PF02653 Branched-chain amino acid transport system / permease component CUGBS08_RS07690 PF02653 Branched-chain amino acid transport system / permease component CUGBS08_RS07695 PF13458 Periplasmic binding protein CUGBS08_RS07700 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) CUGBS08_RS07705 PF00574 Clp protease CUGBS08_RS07715 PF00155 Aminotransferase class I and II CUGBS08_RS07720 PF00588 SpoU rRNA Methylase family CUGBS08_RS07725 PF13520 Amino acid permease CUGBS08_RS07730 PF02254 TrkA-N domain CUGBS08_RS07730 PF02080 TrkA-C domain CUGBS08_RS07735 PF02386 Cation transport protein CUGBS08_RS07740 PF01809 Putative membrane protein insertion efficiency factor CUGBS08_RS07745 PF01479 S4 domain CUGBS08_RS07745 PF00849 RNA pseudouridylate synthase CUGBS08_RS07750 PF04079 Segregation and condensation complex subunit ScpB CUGBS08_RS07755 PF02616 Segregation and condensation protein ScpA CUGBS08_RS07760 PF00589 Phage integrase family CUGBS08_RS07775 PF01725 Ham1 family CUGBS08_RS07780 PF01177 Asp/Glu/Hydantoin racemase CUGBS08_RS07785 PF03672 Uncharacterised protein family (UPF0154) CUGBS08_RS07795 PF02829 3H domain CUGBS08_RS07795 PF08279 HTH domain CUGBS08_RS07800 PF01027 Inhibitor of apoptosis-promoting Bax1 CUGBS08_RS07810 PF00588 SpoU rRNA Methylase family CUGBS08_RS07810 PF08032 RNA 2'-O ribose methyltransferase substrate binding CUGBS08_RS07815 PF00708 Acylphosphatase CUGBS08_RS07820 PF02096 60Kd inner membrane protein CUGBS08_RS07825 PF00528 Binding-protein-dependent transport system inner membrane component CUGBS08_RS07830 PF00497 Bacterial extracellular solute-binding proteins, family 3 CUGBS08_RS07835 PF01425 Amidase CUGBS08_RS07840 PF01272 Transcription elongation factor, GreA/GreB, C-term CUGBS08_RS07840 PF03449 Transcription elongation factor, N-terminal CUGBS08_RS07845 PF02618 YceG-like family CUGBS08_RS07855 PF01225 Mur ligase family, catalytic domain CUGBS08_RS07855 PF02875 Mur ligase family, glutamate ligase domain CUGBS08_RS07855 PF08245 Mur ligase middle domain CUGBS08_RS07865 PF04434 SWIM zinc finger CUGBS08_RS07865 PF00176 SNF2 family N-terminal domain CUGBS08_RS07865 PF00271 Helicase conserved C-terminal domain CUGBS08_RS07870 PF01926 50S ribosome-binding GTPase CUGBS08_RS07870 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CUGBS08_RS07875 PF01695 IstB-like ATP binding protein CUGBS08_RS07875 PF07319 Primosomal protein DnaI N-terminus CUGBS08_RS07885 PF03477 ATP cone domain CUGBS08_RS07890 PF18719 ArlS sensor domain CUGBS08_RS07890 PF00512 His Kinase A (phospho-acceptor) domain CUGBS08_RS07890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CUGBS08_RS07895 PF00072 Response regulator receiver domain CUGBS08_RS07895 PF00486 Transcriptional regulatory protein, C terminal CUGBS08_RS07905 PF01435 Peptidase family M48 CUGBS08_RS07910 PF04011 LemA family CUGBS08_RS07915 PF02527 rRNA small subunit methyltransferase G CUGBS08_RS07920 PF02386 Cation transport protein CUGBS08_RS07925 PF02080 TrkA-C domain CUGBS08_RS07925 PF02254 TrkA-N domain CUGBS08_RS07935 PF12558 ATP-binding cassette cobalt transporter CUGBS08_RS07935 PF00005 ABC transporter CUGBS08_RS07940 PF07155 ECF-type riboflavin transporter, S component CUGBS08_RS07945 PF00375 Sodium:dicarboxylate symporter family CUGBS08_RS07950 PF05525 Branched-chain amino acid transport protein CUGBS08_RS07955 PF13823 Alcohol dehydrogenase GroES-associated CUGBS08_RS07955 PF08240 Alcohol dehydrogenase GroES-like domain CUGBS08_RS07955 PF00107 Zinc-binding dehydrogenase CUGBS08_RS07960 PF00528 Binding-protein-dependent transport system inner membrane component CUGBS08_RS07965 PF09383 NIL domain CUGBS08_RS07965 PF00005 ABC transporter CUGBS08_RS07970 PF07687 Peptidase dimerisation domain CUGBS08_RS07970 PF01546 Peptidase family M20/M25/M40 CUGBS08_RS07975 PF03180 NLPA lipoprotein CUGBS08_RS07980 PF00497 Bacterial extracellular solute-binding proteins, family 3 CUGBS08_RS07985 PF07722 Peptidase C26 CUGBS08_RS07990 PF01709 Transcriptional regulator CUGBS08_RS07995 PF02733 Dak1 domain CUGBS08_RS08000 PF00440 Bacterial regulatory proteins, tetR family CUGBS08_RS08000 PF14278 Transcriptional regulator C-terminal region CUGBS08_RS08005 PF02733 Dak1 domain CUGBS08_RS08010 PF02734 DAK2 domain CUGBS08_RS08015 PF03610 PTS system fructose IIA component CUGBS08_RS08020 PF00230 Major intrinsic protein CUGBS08_RS08030 PF07739 TipAS antibiotic-recognition domain CUGBS08_RS08030 PF13411 MerR HTH family regulatory protein CUGBS08_RS08035 PF05636 HIGH Nucleotidyl Transferase CUGBS08_RS08045 PF13649 Methyltransferase domain CUGBS08_RS08060 PF01966 HD domain CUGBS08_RS08065 PF01467 Cytidylyltransferase-like CUGBS08_RS08070 PF01985 CRS1 / YhbY (CRM) domain CUGBS08_RS08075 PF01926 50S ribosome-binding GTPase CUGBS08_RS08090 PF02934 GatB/GatE catalytic domain CUGBS08_RS08090 PF02637 GatB domain CUGBS08_RS08095 PF01425 Amidase CUGBS08_RS08100 PF02686 Glu-tRNAGln amidotransferase C subunit CUGBS08_RS08105 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain CUGBS08_RS08105 PF00391 PEP-utilising enzyme, mobile domain CUGBS08_RS08105 PF02896 PEP-utilising enzyme, TIM barrel domain CUGBS08_RS08110 PF03618 Kinase/pyrophosphorylase CUGBS08_RS08115 PF08279 HTH domain CUGBS08_RS08115 PF00571 CBS domain CUGBS08_RS08120 PF00378 Enoyl-CoA hydratase/isomerase CUGBS08_RS08120 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CUGBS08_RS08120 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CUGBS08_RS08125 PF00857 Isochorismatase family CUGBS08_RS08130 PF06018 CodY GAF-like domain CUGBS08_RS08130 PF08222 CodY helix-turn-helix domain CUGBS08_RS08135 PF00155 Aminotransferase class I and II CUGBS08_RS08140 PF00582 Universal stress protein family CUGBS08_RS08150 PF00710 Asparaginase, N-terminal CUGBS08_RS08150 PF17763 Glutaminase/Asparaginase C-terminal domain CUGBS08_RS08155 PF08501 Shikimate dehydrogenase substrate binding domain CUGBS08_RS08155 PF18317 Shikimate 5'-dehydrogenase C-terminal domain CUGBS08_RS08160 PF00248 Aldo/keto reductase family CUGBS08_RS08165 PF00270 DEAD/DEAH box helicase CUGBS08_RS08165 PF00271 Helicase conserved C-terminal domain CUGBS08_RS08165 PF17191 RecG wedge domain CUGBS08_RS08170 PF05257 CHAP domain CUGBS08_RS08170 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase CUGBS08_RS08175 PF00842 Alanine racemase, C-terminal domain CUGBS08_RS08175 PF01168 Alanine racemase, N-terminal domain CUGBS08_RS08180 PF01648 4'-phosphopantetheinyl transferase superfamily CUGBS08_RS08185 PF00793 DAHP synthetase I family CUGBS08_RS08190 PF02810 SEC-C motif CUGBS08_RS08190 PF07517 SecA DEAD-like domain CUGBS08_RS08190 PF01043 SecA preprotein cross-linking domain CUGBS08_RS08190 PF07516 SecA Wing and Scaffold domain CUGBS08_RS08195 PF01238 Phosphomannose isomerase type I CUGBS08_RS08200 PF00480 ROK family CUGBS08_RS08205 PF02378 Phosphotransferase system, EIIC CUGBS08_RS08205 PF00367 phosphotransferase system, EIIB CUGBS08_RS08205 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CUGBS08_RS08210 PF00251 Glycosyl hydrolases family 32 N-terminal domain CUGBS08_RS08210 PF08244 Glycosyl hydrolases family 32 C terminal CUGBS08_RS08215 PF00356 Bacterial regulatory proteins, lacI family CUGBS08_RS08220 PF01029 NusB family CUGBS08_RS08225 PF03780 Asp23 family, cell envelope-related function CUGBS08_RS08230 PF09285 Elongation factor P, C-terminal CUGBS08_RS08230 PF01132 Elongation factor P (EF-P) OB domain CUGBS08_RS08230 PF08207 Elongation factor P (EF-P) KOW-like domain CUGBS08_RS08250 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CUGBS08_RS08265 PF07690 Major Facilitator Superfamily CUGBS08_RS08270 PF00005 ABC transporter CUGBS08_RS08270 PF17760 UvrA interaction domain CUGBS08_RS08270 PF17755 UvrA DNA-binding domain CUGBS08_RS08285 PF01084 Ribosomal protein S18 CUGBS08_RS08290 PF00436 Single-strand binding protein family CUGBS08_RS08295 PF01250 Ribosomal protein S6 CUGBS08_RS08300 PF14815 NUDIX domain CUGBS08_RS08300 PF00730 HhH-GPD superfamily base excision DNA repair protein CUGBS08_RS08305 PF01381 Helix-turn-helix CUGBS08_RS08310 PF00085 Thioredoxin CUGBS08_RS08320 PF00488 MutS domain V CUGBS08_RS08320 PF01713 Smr domain CUGBS08_RS08335 PF01351 Ribonuclease HII CUGBS08_RS08335 PF11858 Domain of unknown function (DUF3378) CUGBS08_RS08340 PF10502 Signal peptidase, peptidase S26 CUGBS08_RS08345 PF13538 UvrD-like helicase C-terminal domain CUGBS08_RS08345 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain CUGBS08_RS08345 PF14490 Helix-hairpin-helix containing domain CUGBS08_RS08355 PF00817 impB/mucB/samB family CUGBS08_RS08355 PF11799 impB/mucB/samB family C-terminal domain CUGBS08_RS08355 PF11798 IMS family HHH motif CUGBS08_RS08360 PF01228 Glycine radical CUGBS08_RS08360 PF02901 Pyruvate formate lyase-like CUGBS08_RS08365 PF01243 Pyridoxamine 5'-phosphate oxidase CUGBS08_RS08370 PF00144 Beta-lactamase CUGBS08_RS08385 PF00230 Major intrinsic protein CUGBS08_RS08395 PF07690 Major Facilitator Superfamily CUGBS08_RS08400 PF13545 Crp-like helix-turn-helix domain CUGBS08_RS08405 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain CUGBS08_RS08405 PF02129 X-Pro dipeptidyl-peptidase (S15 family) CUGBS08_RS08405 PF09168 X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal CUGBS08_RS08415 PF00348 Polyprenyl synthetase CUGBS08_RS08420 PF00664 ABC transporter transmembrane region CUGBS08_RS08420 PF00005 ABC transporter CUGBS08_RS08425 PF00005 ABC transporter CUGBS08_RS08425 PF00664 ABC transporter transmembrane region CUGBS08_RS08430 PF02322 Cytochrome bd terminal oxidase subunit II CUGBS08_RS08435 PF01654 Cytochrome bd terminal oxidase subunit I CUGBS08_RS08440 PF07992 Pyridine nucleotide-disulphide oxidoreductase CUGBS08_RS08455 PF02384 N-6 DNA Methylase CUGBS08_RS08455 PF12161 HsdM N-terminal domain CUGBS08_RS08465 PF00456 Transketolase, thiamine diphosphate binding domain CUGBS08_RS08465 PF02779 Transketolase, pyrimidine binding domain CUGBS08_RS08465 PF02780 Transketolase, C-terminal domain CUGBS08_RS08475 PF00834 Ribulose-phosphate 3 epimerase family CUGBS08_RS08480 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CUGBS08_RS08485 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CUGBS08_RS08490 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CUGBS08_RS08495 PF00874 PRD domain CUGBS08_RS08495 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CUGBS08_RS08495 PF05043 Mga helix-turn-helix domain CUGBS08_RS08495 PF08279 HTH domain CUGBS08_RS08510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CUGBS08_RS08510 PF03466 LysR substrate binding domain CUGBS08_RS08515 PF00106 short chain dehydrogenase CUGBS08_RS08525 PF06125 Bacterial protein of unknown function (DUF961) CUGBS08_RS08540 PF02486 Replication initiation factor CUGBS08_RS08540 PF18106 Rolling Circle replication initiation protein N-terminal domain CUGBS08_RS08570 PF00877 NlpC/P60 family CUGBS08_RS08580 PF00679 Elongation factor G C-terminus CUGBS08_RS08580 PF14492 Elongation Factor G, domain II CUGBS08_RS08580 PF03764 Elongation factor G, domain IV CUGBS08_RS08580 PF00009 Elongation factor Tu GTP binding domain CUGBS08_RS08600 PF09035 Excisionase from transposon Tn916 CUGBS08_RS08605 PF02920 DNA binding domain of tn916 integrase CUGBS08_RS08605 PF00589 Phage integrase family CUGBS08_RS08610 PF00248 Aldo/keto reductase family CUGBS08_RS08615 PF04229 GrpB protein CUGBS08_RS08620 PF02567 Phenazine biosynthesis-like protein CUGBS08_RS08630 PF02575 YbaB/EbfC DNA-binding family CUGBS08_RS08640 PF13411 MerR HTH family regulatory protein CUGBS08_RS08640 PF07739 TipAS antibiotic-recognition domain CUGBS08_RS08650 PF04394 Protein of unknown function, DUF536 CUGBS08_RS08650 PF08279 HTH domain CUGBS08_RS08665 PF00253 Ribosomal protein S14p/S29e CUGBS08_RS08675 PF00814 Glycoprotease family CUGBS08_RS08680 PF00583 Acetyltransferase (GNAT) family CUGBS08_RS08685 PF00814 Glycoprotease family CUGBS08_RS08690 PF07288 Protein of unknown function (DUF1447) CUGBS08_RS08695 PF17770 Ribonuclease J C-terminal domain CUGBS08_RS08695 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain CUGBS08_RS08695 PF00753 Metallo-beta-lactamase superfamily CUGBS08_RS08700 PF05257 CHAP domain CUGBS08_RS08700 PF01476 LysM domain CUGBS08_RS08705 PF03951 Glutamine synthetase, beta-Grasp domain CUGBS08_RS08705 PF00120 Glutamine synthetase, catalytic domain CUGBS08_RS08710 PF13411 MerR HTH family regulatory protein CUGBS08_RS08720 PF00162 Phosphoglycerate kinase CUGBS08_RS08725 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) CUGBS08_RS08730 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CUGBS08_RS08730 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CUGBS08_RS08735 PF00679 Elongation factor G C-terminus CUGBS08_RS08735 PF14492 Elongation Factor G, domain II CUGBS08_RS08735 PF03764 Elongation factor G, domain IV CUGBS08_RS08735 PF00009 Elongation factor Tu GTP binding domain CUGBS08_RS08735 PF03144 Elongation factor Tu domain 2 CUGBS08_RS08740 PF00177 Ribosomal protein S7p/S5e CUGBS08_RS08745 PF00164 Ribosomal protein S12/S23 CUGBS08_RS08750 PF00156 Phosphoribosyl transferase domain CUGBS08_RS08750 PF09182 Bacterial purine repressor, N-terminal CUGBS08_RS08755 PF01336 OB-fold nucleic acid binding domain CUGBS08_RS08755 PF01966 HD domain CUGBS08_RS08760 PF02646 RmuC family CUGBS08_RS08770 PF00834 Ribulose-phosphate 3 epimerase family CUGBS08_RS08775 PF16745 RsgA N-terminal domain CUGBS08_RS08775 PF03193 RsgA GTPase CUGBS08_RS08780 PF08241 Methyltransferase domain CUGBS08_RS08785 PF00398 Ribosomal RNA adenine dimethylase CUGBS08_RS08795 PF13331 Domain of unknown function (DUF4093) CUGBS08_RS08800 PF01026 TatD related DNase CUGBS08_RS08825 PF04914 DltD protein CUGBS08_RS08830 PF00550 Phosphopantetheine attachment site CUGBS08_RS08835 PF03062 MBOAT, membrane-bound O-acyltransferase family CUGBS08_RS08840 PF00501 AMP-binding enzyme CUGBS08_RS08840 PF13193 AMP-binding enzyme C-terminal domain CUGBS08_RS08850 PF00512 His Kinase A (phospho-acceptor) domain CUGBS08_RS08850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CUGBS08_RS08855 PF00486 Transcriptional regulatory protein, C terminal CUGBS08_RS08855 PF00072 Response regulator receiver domain CUGBS08_RS08860 PF00468 Ribosomal protein L34 CUGBS08_RS08865 PF07670 Nucleoside recognition CUGBS08_RS08870 PF00528 Binding-protein-dependent transport system inner membrane component CUGBS08_RS08875 PF00571 CBS domain CUGBS08_RS08875 PF00005 ABC transporter CUGBS08_RS08880 PF09364 XFP N-terminal domain CUGBS08_RS08880 PF09363 XFP C-terminal domain CUGBS08_RS08880 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase CUGBS08_RS08900 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CUGBS08_RS08900 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CUGBS08_RS08910 PF03611 PTS system sugar-specific permease component CUGBS08_RS08915 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CUGBS08_RS08915 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CUGBS08_RS08925 PF00356 Bacterial regulatory proteins, lacI family CUGBS08_RS08930 PF00923 Transaldolase/Fructose-6-phosphate aldolase CUGBS08_RS08935 PF00596 Class II Aldolase and Adducin N-terminal domain CUGBS08_RS08940 PF01261 Xylose isomerase-like TIM barrel CUGBS08_RS08945 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CUGBS08_RS08950 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CUGBS08_RS08955 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CUGBS08_RS08960 PF03611 PTS system sugar-specific permease component CUGBS08_RS08975 PF00709 Adenylosuccinate synthetase CUGBS08_RS08990 PF04262 Glutamate-cysteine ligase CUGBS08_RS08990 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CUGBS08_RS08990 PF18419 ATP-grasp-like domain CUGBS08_RS09005 PF01430 Hsp33 protein CUGBS08_RS09010 PF01207 Dihydrouridine synthase (Dus) CUGBS08_RS09015 PF01712 Deoxynucleoside kinase CUGBS08_RS09025 PF02861 Clp amino terminal domain, pathogenicity island component CUGBS08_RS09025 PF17871 AAA lid domain CUGBS08_RS09025 PF10431 C-terminal, D2-small domain, of ClpB protein CUGBS08_RS09025 PF00004 ATPase family associated with various cellular activities (AAA) CUGBS08_RS09025 PF07724 AAA domain (Cdc48 subfamily) CUGBS08_RS09030 PF17727 CtsR C-terminal dimerization domain CUGBS08_RS09030 PF05848 CtsR N-terminal HTH domain CUGBS08_RS09040 PF00889 Elongation factor TS CUGBS08_RS09045 PF00318 Ribosomal protein S2 CUGBS08_RS09050 PF00578 AhpC/TSA family CUGBS08_RS09055 PF13192 Thioredoxin domain CUGBS08_RS09055 PF07992 Pyridine nucleotide-disulphide oxidoreductase CUGBS08_RS09065 PF00999 Sodium/hydrogen exchanger family CUGBS08_RS09075 PF17676 LD-carboxypeptidase C-terminal domain CUGBS08_RS09075 PF02016 LD-carboxypeptidase N-terminal domain CUGBS08_RS09080 PF05649 Peptidase family M13 CUGBS08_RS09080 PF01431 Peptidase family M13 CUGBS08_RS09100 PF01327 Polypeptide deformylase CUGBS08_RS09105 PF00356 Bacterial regulatory proteins, lacI family CUGBS08_RS09130 PF02811 PHP domain CUGBS08_RS09130 PF00929 Exonuclease CUGBS08_RS09130 PF14579 Helix-hairpin-helix motif CUGBS08_RS09130 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CUGBS08_RS09130 PF14480 DNA polymerase III polC-type N-terminus I CUGBS08_RS09130 PF11490 DNA polymerase III polC-type N-terminus II CUGBS08_RS09130 PF07733 Bacterial DNA polymerase III alpha NTPase domain CUGBS08_RS09135 PF01476 LysM domain CUGBS08_RS09135 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase CUGBS08_RS09140 PF03129 Anticodon binding domain CUGBS08_RS09140 PF04073 Aminoacyl-tRNA editing domain CUGBS08_RS09140 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CUGBS08_RS09145 PF02163 Peptidase family M50 CUGBS08_RS09145 PF13180 PDZ domain CUGBS08_RS09155 PF01255 Putative undecaprenyl diphosphate synthase CUGBS08_RS09160 PF02699 Preprotein translocase subunit CUGBS08_RS09170 PF00390 Malic enzyme, N-terminal domain CUGBS08_RS09170 PF03949 Malic enzyme, NAD binding domain CUGBS08_RS09175 PF03390 2-hydroxycarboxylate transporter family CUGBS08_RS09180 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain CUGBS08_RS09180 PF17203 Single cache domain 3 CUGBS08_RS09180 PF00989 PAS fold CUGBS08_RS09180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CUGBS08_RS09185 PF00072 Response regulator receiver domain CUGBS08_RS09190 PF16363 GDP-mannose 4,6 dehydratase CUGBS08_RS09195 PF00128 Alpha amylase, catalytic domain CUGBS08_RS09200 PF03459 TOBE domain CUGBS08_RS09200 PF00005 ABC transporter CUGBS08_RS09200 PF17912 MalK OB fold domain CUGBS08_RS09205 PF13556 PucR C-terminal helix-turn-helix domain CUGBS08_RS09210 PF01263 Aldose 1-epimerase CUGBS08_RS09215 PF01791 DeoC/LacD family aldolase CUGBS08_RS09220 PF00294 pfkB family carbohydrate kinase CUGBS08_RS09225 PF02502 Ribose/Galactose Isomerase CUGBS08_RS09230 PF02502 Ribose/Galactose Isomerase CUGBS08_RS09235 PF13088 BNR repeat-like domain CUGBS08_RS09235 PF02973 Sialidase, N-terminal domain CUGBS08_RS09235 PF04650 YSIRK type signal peptide CUGBS08_RS09260 PF08220 DeoR-like helix-turn-helix domain CUGBS08_RS09260 PF00455 DeoR C terminal sensor domain CUGBS08_RS09275 PF02580 D-Tyr-tRNA(Tyr) deacylase CUGBS08_RS09280 PF02824 TGS domain CUGBS08_RS09280 PF13291 ACT domain CUGBS08_RS09280 PF04607 Region found in RelA / SpoT proteins CUGBS08_RS09285 PF00149 Calcineurin-like phosphoesterase CUGBS08_RS09285 PF02872 5'-nucleotidase, C-terminal domain CUGBS08_RS09290 PF07972 NrdI Flavodoxin like CUGBS08_RS09295 PF05343 M42 glutamyl aminopeptidase CUGBS08_RS09315 PF12833 Helix-turn-helix domain CUGBS08_RS09315 PF00072 Response regulator receiver domain CUGBS08_RS09320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CUGBS08_RS09320 PF06580 Histidine kinase CUGBS08_RS09325 PF03613 PTS system mannose/fructose/sorbose family IID component CUGBS08_RS09330 PF03609 PTS system sorbose-specific iic component CUGBS08_RS09335 PF03830 PTS system sorbose subfamily IIB component CUGBS08_RS09345 PF00842 Alanine racemase, C-terminal domain CUGBS08_RS09345 PF01757 Acyltransferase family CUGBS08_RS09345 PF01168 Alanine racemase, N-terminal domain CUGBS08_RS09360 PF00005 ABC transporter CUGBS08_RS09360 PF13732 Domain of unknown function (DUF4162) CUGBS08_RS09370 PF00664 ABC transporter transmembrane region CUGBS08_RS09370 PF00005 ABC transporter CUGBS08_RS09370 PF03412 Peptidase C39 family CUGBS08_RS09375 PF17203 Single cache domain 3 CUGBS08_RS09375 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain CUGBS08_RS09375 PF00989 PAS fold CUGBS08_RS09375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CUGBS08_RS09385 PF03372 Endonuclease/Exonuclease/phosphatase family CUGBS08_RS09390 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CUGBS08_RS09390 PF02378 Phosphotransferase system, EIIC CUGBS08_RS09390 PF00367 phosphotransferase system, EIIB CUGBS08_RS09395 PF00989 PAS fold CUGBS08_RS09395 PF00512 His Kinase A (phospho-acceptor) domain CUGBS08_RS09395 PF16736 Single Cache-like CUGBS08_RS09395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CUGBS08_RS09400 PF00486 Transcriptional regulatory protein, C terminal CUGBS08_RS09400 PF00072 Response regulator receiver domain CUGBS08_RS09405 PF01895 PhoU domain CUGBS08_RS09410 PF00005 ABC transporter CUGBS08_RS09415 PF00528 Binding-protein-dependent transport system inner membrane component CUGBS08_RS09420 PF00528 Binding-protein-dependent transport system inner membrane component CUGBS08_RS09425 PF12849 PBP superfamily domain CUGBS08_RS09435 PF04452 RNA methyltransferase CUGBS08_RS09450 PF13411 MerR HTH family regulatory protein CUGBS08_RS09450 PF07739 TipAS antibiotic-recognition domain CUGBS08_RS09460 PF00293 NUDIX domain CUGBS08_RS09475 PF00583 Acetyltransferase (GNAT) family CUGBS08_RS09480 PF16193 AAA C-terminal domain CUGBS08_RS09480 PF12002 MgsA AAA+ ATPase C terminal CUGBS08_RS09480 PF05496 Holliday junction DNA helicase RuvB P-loop domain CUGBS08_RS09505 PF00589 Phage integrase family CUGBS08_RS09515 PF18106 Rolling Circle replication initiation protein N-terminal domain CUGBS08_RS09515 PF02486 Replication initiation factor CUGBS08_RS09530 PF08279 HTH domain CUGBS08_RS09530 PF13280 WYL domain CUGBS08_RS09535 PF01965 DJ-1/PfpI family CUGBS08_RS09570 PF06013 Proteins of 100 residues with WXG CUGBS08_RS09610 PF00005 ABC transporter CUGBS08_RS09615 PF04439 Streptomycin adenylyltransferase CUGBS08_RS09645 PF00005 ABC transporter CUGBS08_RS09655 PF01381 Helix-turn-helix CUGBS08_RS09665 PF03819 MazG nucleotide pyrophosphohydrolase domain CUGBS08_RS09670 PF03641 Possible lysine decarboxylase CUGBS08_RS09680 PF00581 Rhodanese-like domain CUGBS08_RS09685 PF07373 CAMP factor (Cfa) CUGBS08_RS09695 PF00465 Iron-containing alcohol dehydrogenase CUGBS08_RS09705 PF02574 Homocysteine S-methyltransferase CUGBS08_RS09705 PF02219 Methylenetetrahydrofolate reductase CUGBS08_RS09710 PF01717 Cobalamin-independent synthase, Catalytic domain CUGBS08_RS09710 PF08267 Cobalamin-independent synthase, N-terminal domain CUGBS08_RS09720 PF03591 AzlC protein CUGBS08_RS09735 PF00512 His Kinase A (phospho-acceptor) domain CUGBS08_RS09735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CUGBS08_RS09735 PF00672 HAMP domain CUGBS08_RS09745 PF00133 tRNA synthetases class I (I, L, M and V) CUGBS08_RS09745 PF09334 tRNA synthetases class I (M) CUGBS08_RS09745 PF08264 Anticodon-binding domain of tRNA CUGBS08_RS09745 PF13603 Leucyl-tRNA synthetase, Domain 2 CUGBS08_RS09750 PF07690 Major Facilitator Superfamily CUGBS08_RS09755 PF01734 Patatin-like phospholipase CUGBS08_RS09770 PF01734 Patatin-like phospholipase CUGBS08_RS09775 PF00467 KOW motif CUGBS08_RS09775 PF02357 Transcription termination factor nusG CUGBS08_RS09780 PF00746 LPXTG cell wall anchor motif CUGBS08_RS09780 PF01378 B domain CUGBS08_RS09780 PF17573 GA-like domain CUGBS08_RS09790 PF00471 Ribosomal protein L33 CUGBS08_RS09795 PF00905 Penicillin binding protein transpeptidase domain CUGBS08_RS09795 PF00912 Transglycosylase CUGBS08_RS09800 PF00849 RNA pseudouridylate synthase CUGBS08_RS09800 PF01479 S4 domain CUGBS08_RS09810 PF01676 Metalloenzyme superfamily CUGBS08_RS09815 PF01791 DeoC/LacD family aldolase CUGBS08_RS09820 PF01773 Na+ dependent nucleoside transporter N-terminus CUGBS08_RS09820 PF07662 Na+ dependent nucleoside transporter C-terminus CUGBS08_RS09820 PF07670 Nucleoside recognition CUGBS08_RS09825 PF01048 Phosphorylase superfamily CUGBS08_RS09840 PF00118 TCP-1/cpn60 chaperonin family CUGBS08_RS09845 PF00166 Chaperonin 10 Kd subunit CUGBS08_RS09850 PF00005 ABC transporter CUGBS08_RS09855 PF02653 Branched-chain amino acid transport system / permease component CUGBS08_RS09870 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CUGBS08_RS09875 PF03883 Peroxide stress protein YaaA CUGBS08_RS09890 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CUGBS08_RS09900 PF03477 ATP cone domain CUGBS08_RS09900 PF13597 Anaerobic ribonucleoside-triphosphate reductase CUGBS08_RS09915 PF06949 Protein of unknown function (DUF1292) CUGBS08_RS09920 PF03652 Holliday junction resolvase CUGBS08_RS09925 PF06135 IreB regulatory phosphoprotein CUGBS08_RS09930 PF03960 ArsC family CUGBS08_RS09935 PF00154 recA bacterial DNA recombination protein CUGBS08_RS09940 PF02464 Competence-damaged protein CUGBS08_RS09940 PF18146 Damage-inducible protein CinA KH domain CUGBS08_RS09940 PF00994 Probable molybdopterin binding domain CUGBS08_RS09945 PF03352 Methyladenine glycosylase CUGBS08_RS09950 PF01330 RuvA N terminal domain CUGBS08_RS09950 PF07499 RuvA, C-terminal domain CUGBS08_RS09960 PF01119 DNA mismatch repair protein, C-terminal domain CUGBS08_RS09960 PF08676 MutL C terminal dimerisation domain CUGBS08_RS09965 PF00313 'Cold-shock' DNA-binding domain CUGBS08_RS09970 PF01624 MutS domain I CUGBS08_RS09970 PF05188 MutS domain II CUGBS08_RS09970 PF05190 MutS family domain IV CUGBS08_RS09970 PF00488 MutS domain V CUGBS08_RS09970 PF05192 MutS domain III CUGBS08_RS09975 PF01316 Arginine repressor, DNA binding domain CUGBS08_RS09975 PF02863 Arginine repressor, C-terminal domain CUGBS08_RS09980 PF03485 Arginyl tRNA synthetase N terminal domain CUGBS08_RS09980 PF05746 DALR anticodon binding domain CUGBS08_RS09980 PF00750 tRNA synthetases class I (R) CUGBS08_RS09990 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CUGBS08_RS09990 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CUGBS08_RS09995 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CUGBS08_RS09995 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CUGBS08_RS10000 PF02938 GAD domain CUGBS08_RS10000 PF01336 OB-fold nucleic acid binding domain CUGBS08_RS10000 PF00152 tRNA synthetases class II (D, K and N) CUGBS08_RS10005 PF13393 Histidyl-tRNA synthetase CUGBS08_RS10005 PF03129 Anticodon binding domain CUGBS08_RS10010 PF01783 Ribosomal L32p protein family CUGBS08_RS10015 PF00471 Ribosomal protein L33 CUGBS08_RS10070 PF00589 Phage integrase family CUGBS08_RS10070 PF14659 Phage integrase, N-terminal SAM-like domain CUGBS08_RS10080 PF01022 Bacterial regulatory protein, arsR family CUGBS08_RS10145 PF00072 Response regulator receiver domain CUGBS08_RS10145 PF00486 Transcriptional regulatory protein, C terminal CUGBS08_RS10150 PF00512 His Kinase A (phospho-acceptor) domain CUGBS08_RS10150 PF18719 ArlS sensor domain CUGBS08_RS10150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CUGBS08_RS10155 PF03606 C4-dicarboxylate anaerobic carrier CUGBS08_RS10160 PF00696 Amino acid kinase family CUGBS08_RS10165 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CUGBS08_RS10165 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CUGBS08_RS10170 PF00512 His Kinase A (phospho-acceptor) domain CUGBS08_RS10170 PF00989 PAS fold CUGBS08_RS10170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CUGBS08_RS10175 PF08664 YcbB domain CUGBS08_RS10175 PF00072 Response regulator receiver domain CUGBS08_RS10180 PF00005 ABC transporter CUGBS08_RS10180 PF00571 CBS domain CUGBS08_RS10185 PF00528 Binding-protein-dependent transport system inner membrane component CUGBS08_RS10190 PF03706 Lysylphosphatidylglycerol synthase TM region CUGBS08_RS10190 PF09924 Uncharacterised conserved protein (DUF2156) CUGBS08_RS10195 PF00561 alpha/beta hydrolase fold CUGBS08_RS10200 PF06993 Protein of unknown function (DUF1304) CUGBS08_RS10205 PF01061 ABC-2 type transporter CUGBS08_RS10300 PF05154 TM2 domain CUGBS08_RS10320 PF00589 Phage integrase family CUGBS08_RS10320 PF14659 Phage integrase, N-terminal SAM-like domain CUGBS08_RS10325 PF00163 Ribosomal protein S4/S9 N-terminal domain CUGBS08_RS10325 PF01479 S4 domain CUGBS08_RS10335 PF00772 DnaB-like helicase N terminal domain CUGBS08_RS10335 PF03796 DnaB-like helicase C terminal domain CUGBS08_RS10340 PF01281 Ribosomal protein L9, N-terminal domain CUGBS08_RS10340 PF03948 Ribosomal protein L9, C-terminal domain CUGBS08_RS10345 PF01368 DHH family CUGBS08_RS10345 PF02272 DHHA1 domain CUGBS08_RS10350 PF01134 Glucose inhibited division protein A CUGBS08_RS10350 PF13932 GidA associated domain CUGBS08_RS10355 PF01914 MarC family integral membrane protein CUGBS08_RS10365 PF01842 ACT domain CUGBS08_RS10365 PF03315 Serine dehydratase beta chain CUGBS08_RS10370 PF03313 Serine dehydratase alpha chain CUGBS08_RS10380 PF01476 LysM domain CUGBS08_RS10380 PF05257 CHAP domain CUGBS08_RS10385 PF02361 Cobalt transport protein CUGBS08_RS10390 PF00005 ABC transporter CUGBS08_RS10395 PF00005 ABC transporter CUGBS08_RS10400 PF01066 CDP-alcohol phosphatidyltransferase CUGBS08_RS10405 PF05193 Peptidase M16 inactive domain CUGBS08_RS10405 PF00675 Insulinase (Peptidase family M16) CUGBS08_RS10410 PF05193 Peptidase M16 inactive domain CUGBS08_RS10420 PF02463 RecF/RecN/SMC N terminal domain CUGBS08_RS10425 PF06800 Sugar transport protein CUGBS08_RS10435 PF00478 IMP dehydrogenase / GMP reductase domain CUGBS08_RS10435 PF00571 CBS domain CUGBS08_RS10440 PF02863 Arginine repressor, C-terminal domain CUGBS08_RS10440 PF01316 Arginine repressor, DNA binding domain CUGBS08_RS10445 PF00027 Cyclic nucleotide-binding domain CUGBS08_RS10445 PF13545 Crp-like helix-turn-helix domain CUGBS08_RS10460 PF13673 Acetyltransferase (GNAT) domain CUGBS08_RS10465 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CUGBS08_RS10465 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CUGBS08_RS10470 PF13520 Amino acid permease CUGBS08_RS10475 PF00696 Amino acid kinase family CUGBS08_RS10480 PF00579 tRNA synthetases class I (W and Y) CUGBS08_RS10490 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CUGBS08_RS10490 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CUGBS08_RS10495 PF12848 ABC transporter CUGBS08_RS10495 PF00005 ABC transporter CUGBS08_RS10500 PF09586 Bacterial membrane protein YfhO CUGBS08_RS10520 PF02590 Predicted SPOUT methyltransferase CUGBS08_RS10525 PF13180 PDZ domain CUGBS08_RS10530 PF02195 ParB-like nuclease domain CUGBS08_RS10530 PF17762 HTH domain found in ParB protein CUGBS08_RS10535 PF00308 Bacterial dnaA protein CUGBS08_RS10535 PF08299 Bacterial dnaA protein helix-turn-helix CUGBS08_RS10540 PF02767 DNA polymerase III beta subunit, central domain CUGBS08_RS10540 PF02768 DNA polymerase III beta subunit, C-terminal domain CUGBS08_RS10540 PF00712 DNA polymerase III beta subunit, N-terminal domain CUGBS08_RS10545 PF00781 Diacylglycerol kinase catalytic domain CUGBS08_RS10555 PF01926 50S ribosome-binding GTPase CUGBS08_RS10555 PF06071 Protein of unknown function (DUF933) CUGBS08_RS10560 PF01195 Peptidyl-tRNA hydrolase CUGBS08_RS10565 PF02559 CarD-like/TRCF domain CUGBS08_RS10565 PF00271 Helicase conserved C-terminal domain CUGBS08_RS10565 PF03461 TRCF domain CUGBS08_RS10565 PF17757 UvrB interaction domain CUGBS08_RS10565 PF00270 DEAD/DEAH box helicase CUGBS08_RS10570 PF01479 S4 domain CUGBS08_RS10590 PF01171 PP-loop family CUGBS08_RS10595 PF00156 Phosphoribosyl transferase domain CUGBS08_RS10600 PF06480 FtsH Extracellular CUGBS08_RS10600 PF17862 AAA+ lid domain CUGBS08_RS10600 PF00004 ATPase family associated with various cellular activities (AAA) CUGBS08_RS10600 PF01434 Peptidase family M41