CUGBS98_RS00100	SM01400	CUGBS98_RS00100
CUGBS98_RS00135	SM01211	CUGBS98_RS00135
CUGBS98_RS00160	SM00798	AICARFT/IMPCHase bienzyme
CUGBS98_RS00160	SM00851	MGS-like domain
CUGBS98_RS00170	SM00257	Lysin motif
CUGBS98_RS00205	SM01130	CUGBS98_RS00205
CUGBS98_RS00225	SM01209	CUGBS98_RS00225
CUGBS98_RS00225	SM01210	CUGBS98_RS00225
CUGBS98_RS00230	SM01001	AIR carboxylase
CUGBS98_RS00245	SM00998	Adenylosuccinate lyase C-terminus
CUGBS98_RS00250	SM00530	Helix-turn-helix XRE-family like proteins 
CUGBS98_RS00255	SM00382	ATPases associated with a variety of cellular activities
CUGBS98_RS00260	SM00226	Low molecular weight phosphatase family
CUGBS98_RS00265	SM00698	Possible plasma membrane-binding motif in junctophilins, PIP-5-kinases and protein kinases.
CUGBS98_RS00280	SM00829	Enoylreductase
CUGBS98_RS00295	SM01403	CUGBS98_RS00295
CUGBS98_RS00315	SM01382	CUGBS98_RS00315
CUGBS98_RS00315	SM01383	CUGBS98_RS00315
CUGBS98_RS00330	SM00322	K homology RNA-binding domain
CUGBS98_RS00350	SM01374	CUGBS98_RS00350
CUGBS98_RS00355	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
CUGBS98_RS00410	SM00316	Ribosomal protein S1-like RNA-binding domain
CUGBS98_RS00425	SM00662	RNA polymerases D
CUGBS98_RS00550	SM00855	Phosphoglycerate mutase family
CUGBS98_RS00560	SM00047	Lysozyme subfamily 2
CUGBS98_RS00580	SM00271	DnaJ molecular chaperone homology domain
CUGBS98_RS00585	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CUGBS98_RS00645	SM00382	ATPases associated with a variety of cellular activities
CUGBS98_RS00650	SM00947	Carbonic anhydrase
CUGBS98_RS00680	SM00382	ATPases associated with a variety of cellular activities
CUGBS98_RS00695	SM00354	helix_turn _helix lactose operon repressor
CUGBS98_RS00705	SM00382	ATPases associated with a variety of cellular activities
CUGBS98_RS00710	SM00448	cheY-homologous receiver domain
CUGBS98_RS00710	SM00862	Transcriptional regulatory protein, C terminal
CUGBS98_RS00715	SM00387	Histidine kinase-like ATPases
CUGBS98_RS00715	SM00388	His Kinase A (phosphoacceptor) domain
CUGBS98_RS00750	SM01120	CUGBS98_RS00750
CUGBS98_RS00750	SM01121	CUGBS98_RS00750
CUGBS98_RS00755	SM00244	prohibitin homologues
CUGBS98_RS00790	SM00382	ATPases associated with a variety of cellular activities
CUGBS98_RS00795	SM00062	Bacterial periplasmic substrate-binding proteins
CUGBS98_RS00820	SM00382	ATPases associated with a variety of cellular activities
CUGBS98_RS00850	SM00936	Penicillin-binding protein 5, C-terminal domain 
CUGBS98_RS00870	SM00382	ATPases associated with a variety of cellular activities
CUGBS98_RS00875	SM00382	ATPases associated with a variety of cellular activities
CUGBS98_RS00910	SM00347	helix_turn_helix multiple antibiotic resistance protein
CUGBS98_RS00915	SM00382	ATPases associated with a variety of cellular activities
CUGBS98_RS00925	SM00892	DNA/RNA non-specific endonuclease
CUGBS98_RS00930	SM00363	S4 RNA-binding domain
CUGBS98_RS00945	SM00663	RNA polymerase I subunit A N-terminus
CUGBS98_RS01000	SM00530	Helix-turn-helix XRE-family like proteins 
CUGBS98_RS01060	SM00387	Histidine kinase-like ATPases
CUGBS98_RS01065	SM00448	cheY-homologous receiver domain
CUGBS98_RS01065	SM00850	LytTr DNA-binding domain
CUGBS98_RS01095	SM00382	ATPases associated with a variety of cellular activities
CUGBS98_RS01100	SM00382	ATPases associated with a variety of cellular activities
CUGBS98_RS01110	SM00642	Alpha-amylase domain
CUGBS98_RS01135	SM00861	Transketolase, pyrimidine binding domain
CUGBS98_RS01145	SM01387	CUGBS98_RS01145
CUGBS98_RS01150	SM00316	Ribosomal protein S1-like RNA-binding domain
CUGBS98_RS01150	SM00322	K homology RNA-binding domain
CUGBS98_RS01170	SM00840	CUGBS98_RS01170
CUGBS98_RS01180	SM00967	RNA 2'-O ribose methyltransferase substrate binding
CUGBS98_RS01210	SM00530	Helix-turn-helix XRE-family like proteins 
CUGBS98_RS01310	SM00530	Helix-turn-helix XRE-family like proteins 
CUGBS98_RS01335	SM00116	Domain in cystathionine beta-synthase and other proteins.
CUGBS98_RS01335	SM00382	ATPases associated with a variety of cellular activities
CUGBS98_RS01450	SM00530	Helix-turn-helix XRE-family like proteins 
CUGBS98_RS01495	SM00382	ATPases associated with a variety of cellular activities
CUGBS98_RS01575	SM00861	Transketolase, pyrimidine binding domain
CUGBS98_RS01585	SM00382	ATPases associated with a variety of cellular activities
CUGBS98_RS01620	SM00740	CUGBS98_RS01620
CUGBS98_RS01630	SM00487	DEAD-like helicases superfamily
CUGBS98_RS01630	SM00490	helicase superfamily c-terminal domain
CUGBS98_RS01635	SM00062	Bacterial periplasmic substrate-binding proteins
CUGBS98_RS01645	SM00382	ATPases associated with a variety of cellular activities
CUGBS98_RS01700	SM00981	CUGBS98_RS01700
CUGBS98_RS01715	SM00322	K homology RNA-binding domain
CUGBS98_RS01715	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CUGBS98_RS01720	SM00382	ATPases associated with a variety of cellular activities
CUGBS98_RS01735	SM00421	helix_turn_helix, Lux Regulon
CUGBS98_RS01735	SM00448	cheY-homologous receiver domain
CUGBS98_RS01745	SM00072	Guanylate kinase homologues.
CUGBS98_RS01750	SM01409	CUGBS98_RS01750
CUGBS98_RS01755	SM00487	DEAD-like helicases superfamily
CUGBS98_RS01755	SM00490	helicase superfamily c-terminal domain
CUGBS98_RS01770	SM00331	Sigma factor PP2C-like phosphatases
CUGBS98_RS01770	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
CUGBS98_RS01775	SM00220	Serine/Threonine protein kinases, catalytic domain
CUGBS98_RS01775	SM00740	CUGBS98_RS01775
CUGBS98_RS01790	SM00421	helix_turn_helix, Lux Regulon
CUGBS98_RS01790	SM00448	cheY-homologous receiver domain
CUGBS98_RS01800	SM00316	Ribosomal protein S1-like RNA-binding domain
CUGBS98_RS01810	SM00420	helix_turn_helix, Deoxyribose operon repressor
CUGBS98_RS01810	SM01134	CUGBS98_RS01810
CUGBS98_RS01860	SM00487	DEAD-like helicases superfamily
CUGBS98_RS01860	SM00490	helicase superfamily c-terminal domain
CUGBS98_RS01915	SM00347	helix_turn_helix multiple antibiotic resistance protein
CUGBS98_RS01935	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CUGBS98_RS01940	SM00822	CUGBS98_RS01940
CUGBS98_RS01945	SM00825	Beta-ketoacyl synthase
CUGBS98_RS01960	SM00878	Biotin carboxylase C-terminal domain
CUGBS98_RS02065	SM00382	ATPases associated with a variety of cellular activities
CUGBS98_RS02095	SM00322	K homology RNA-binding domain
CUGBS98_RS02150	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
CUGBS98_RS02150	SM00474	3'-5' exonuclease
CUGBS98_RS02150	SM00475	5'-3' exonuclease
CUGBS98_RS02150	SM00482	DNA polymerase A domain
CUGBS98_RS02155	SM00881	CoA binding domain
CUGBS98_RS02170	SM00448	cheY-homologous receiver domain
CUGBS98_RS02170	SM00862	Transcriptional regulatory protein, C terminal
CUGBS98_RS02175	SM00387	Histidine kinase-like ATPases
CUGBS98_RS02175	SM00388	His Kinase A (phosphoacceptor) domain
CUGBS98_RS02200	SM00849	Metallo-beta-lactamase superfamily
CUGBS98_RS02255	SM00393	Putative single-stranded nucleic acids-binding domain
CUGBS98_RS02255	SM01245	CUGBS98_RS02255
CUGBS98_RS02360	SM00871	Bacterial transcription activator, effector binding domain
CUGBS98_RS02375	SM00422	helix_turn_helix, mercury resistance
CUGBS98_RS02400	SM00342	helix_turn_helix, arabinose operon control protein
CUGBS98_RS02455	SM01007	Class II Aldolase and Adducin N-terminal domain
CUGBS98_RS02475	SM00342	helix_turn_helix, arabinose operon control protein
CUGBS98_RS02560	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CUGBS98_RS02560	SM00487	DEAD-like helicases superfamily
CUGBS98_RS02660	SM00382	ATPases associated with a variety of cellular activities
CUGBS98_RS02665	SM00382	ATPases associated with a variety of cellular activities
CUGBS98_RS02680	SM00729	Elongator protein 3, MiaB family, Radical SAM
CUGBS98_RS02680	SM00876	Biotin and Thiamin Synthesis associated domain
CUGBS98_RS02700	SM00478	endonuclease III
CUGBS98_RS02720	SM00450	Rhodanese Homology Domain
CUGBS98_RS02725	SM00838	Elongation factor G C-terminus
CUGBS98_RS02750	SM00842	Cell division protein FtsA
CUGBS98_RS02755	SM00864	Tubulin/FtsZ family, GTPase domain
CUGBS98_RS02755	SM00865	Tubulin/FtsZ family, C-terminal domain
CUGBS98_RS02775	SM00363	S4 RNA-binding domain
CUGBS98_RS02800	SM00382	ATPases associated with a variety of cellular activities
CUGBS98_RS02800	SM01086	C-terminal, D2-small domain, of ClpB protein
CUGBS98_RS02815	SM00382	ATPases associated with a variety of cellular activities
CUGBS98_RS02850	SM00363	S4 RNA-binding domain
CUGBS98_RS02880	SM00411	bacterial (prokaryotic) histone like domain
CUGBS98_RS02915	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CUGBS98_RS02925	SM00831	Cation transporter/ATPase, N-terminus
CUGBS98_RS02945	SM00937	CUGBS98_RS02945
CUGBS98_RS02950	SM00382	ATPases associated with a variety of cellular activities
CUGBS98_RS02965	SM00849	Metallo-beta-lactamase superfamily
CUGBS98_RS02975	SM00479	CUGBS98_RS02975
CUGBS98_RS02975	SM00491	CUGBS98_RS02975
CUGBS98_RS03050	SM00830	Chorismate mutase type II
CUGBS98_RS03095	SM00382	ATPases associated with a variety of cellular activities
CUGBS98_RS03105	SM00448	cheY-homologous receiver domain
CUGBS98_RS03105	SM00862	Transcriptional regulatory protein, C terminal
CUGBS98_RS03135	SM00387	Histidine kinase-like ATPases
CUGBS98_RS03135	SM00433	TopoisomeraseII
CUGBS98_RS03160	SM01192	CUGBS98_RS03160
CUGBS98_RS03160	SM01193	CUGBS98_RS03160
CUGBS98_RS03165	SM00892	DNA/RNA non-specific endonuclease
CUGBS98_RS03235	SM00342	helix_turn_helix, arabinose operon control protein
CUGBS98_RS03265	SM00327	von Willebrand factor (vWF) type A domain
CUGBS98_RS03300	SM00382	ATPases associated with a variety of cellular activities
CUGBS98_RS03325	SM00822	CUGBS98_RS03325
CUGBS98_RS03340	SM00382	ATPases associated with a variety of cellular activities
CUGBS98_RS03360	SM00825	Beta-ketoacyl synthase
CUGBS98_RS03445	SM00382	ATPases associated with a variety of cellular activities
CUGBS98_RS03455	SM00892	DNA/RNA non-specific endonuclease
CUGBS98_RS03465	SM00382	ATPases associated with a variety of cellular activities
CUGBS98_RS03510	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CUGBS98_RS03510	SM00895	CUGBS98_RS03510
CUGBS98_RS03550	SM00354	helix_turn _helix lactose operon repressor
CUGBS98_RS03555	SM00642	Alpha-amylase domain
CUGBS98_RS03570	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
CUGBS98_RS03575	SM00448	cheY-homologous receiver domain
CUGBS98_RS03575	SM00862	Transcriptional regulatory protein, C terminal
CUGBS98_RS03600	SM00062	Bacterial periplasmic substrate-binding proteins
CUGBS98_RS03605	SM00382	ATPases associated with a variety of cellular activities
CUGBS98_RS03610	SM00448	cheY-homologous receiver domain
CUGBS98_RS03610	SM00862	Transcriptional regulatory protein, C terminal
CUGBS98_RS03615	SM00091	PAS domain
CUGBS98_RS03615	SM00387	Histidine kinase-like ATPases
CUGBS98_RS03615	SM00388	His Kinase A (phosphoacceptor) domain
CUGBS98_RS03620	SM00849	Metallo-beta-lactamase superfamily
CUGBS98_RS03630	SM00358	Double-stranded RNA binding motif
CUGBS98_RS03630	SM00535	Ribonuclease III family
CUGBS98_RS03635	SM00968	SMC proteins Flexible Hinge Domain
CUGBS98_RS03650	SM00382	ATPases associated with a variety of cellular activities
CUGBS98_RS03650	SM00962	SRP54-type protein, GTPase domain
CUGBS98_RS03650	SM00963	SRP54-type protein, helical bundle domain
CUGBS98_RS03675	SM00316	Ribosomal protein S1-like RNA-binding domain
CUGBS98_RS03675	SM00732	Likely ribonuclease with RNase H fold.
CUGBS98_RS03680	SM00731	SprT homologues.
CUGBS98_RS03770	SM00855	Phosphoglycerate mutase family
CUGBS98_RS03825	SM00855	Phosphoglycerate mutase family
CUGBS98_RS03835	SM00493	CUGBS98_RS03835
CUGBS98_RS03890	SM00487	DEAD-like helicases superfamily
CUGBS98_RS03890	SM00490	helicase superfamily c-terminal domain
CUGBS98_RS03905	SM00563	Phosphate acyltransferases
CUGBS98_RS03910	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CUGBS98_RS03915	SM00849	Metallo-beta-lactamase superfamily
CUGBS98_RS03925	SM00354	helix_turn _helix lactose operon repressor
CUGBS98_RS03950	SM01061	CAT RNA binding domain
CUGBS98_RS04010	SM00363	S4 RNA-binding domain
CUGBS98_RS04050	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
CUGBS98_RS04075	SM00530	Helix-turn-helix XRE-family like proteins 
CUGBS98_RS04125	SM00487	DEAD-like helicases superfamily
CUGBS98_RS04125	SM00490	helicase superfamily c-terminal domain
CUGBS98_RS04140	SM00382	ATPases associated with a variety of cellular activities
CUGBS98_RS04185	SM00382	ATPases associated with a variety of cellular activities
CUGBS98_RS04225	SM00116	Domain in cystathionine beta-synthase and other proteins.
CUGBS98_RS04250	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CUGBS98_RS04250	SM00292	breast cancer carboxy-terminal domain
CUGBS98_RS04250	SM00532	Ligase N family
CUGBS98_RS04255	SM00046	Diacylglycerol kinase catalytic domain (presumed)
CUGBS98_RS04260	SM00642	Alpha-amylase domain
CUGBS98_RS04265	SM00642	Alpha-amylase domain
CUGBS98_RS04315	SM00382	ATPases associated with a variety of cellular activities
CUGBS98_RS04340	SM00892	DNA/RNA non-specific endonuclease
CUGBS98_RS04355	SM00873	B3/4 domain
CUGBS98_RS04355	SM00874	tRNA synthetase B5 domain
CUGBS98_RS04355	SM00896	Ferredoxin-fold anticodon binding domain
CUGBS98_RS04385	SM00382	ATPases associated with a variety of cellular activities
CUGBS98_RS04395	SM00861	Transketolase, pyrimidine binding domain
CUGBS98_RS04450	SM00729	Elongator protein 3, MiaB family, Radical SAM
CUGBS98_RS04495	SM00562	CUGBS98_RS04495
CUGBS98_RS04500	SM00838	Elongation factor G C-terminus
CUGBS98_RS04505	SM00365	Leucine-rich repeat, SDS22-like subfamily
CUGBS98_RS04505	SM00369	Leucine-rich repeats, typical (most populated) subfamily
CUGBS98_RS04510	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CUGBS98_RS04525	SM00831	Cation transporter/ATPase, N-terminus
CUGBS98_RS04555	SM00382	ATPases associated with a variety of cellular activities
CUGBS98_RS04560	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CUGBS98_RS04565	SM00481	DNA polymerase alpha chain like domain
CUGBS98_RS04600	SM00382	ATPases associated with a variety of cellular activities
CUGBS98_RS04605	SM00062	Bacterial periplasmic substrate-binding proteins
CUGBS98_RS04635	SM00382	ATPases associated with a variety of cellular activities
CUGBS98_RS04660	SM00434	DNA Topoisomerase IV
CUGBS98_RS04700	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CUGBS98_RS04700	SM00866	CUGBS98_RS04700
CUGBS98_RS04725	SM00245	tail specific protease
CUGBS98_RS04730	SM00382	ATPases associated with a variety of cellular activities
CUGBS98_RS04740	SM00448	cheY-homologous receiver domain
CUGBS98_RS04740	SM00862	Transcriptional regulatory protein, C terminal
CUGBS98_RS04745	SM00387	Histidine kinase-like ATPases
CUGBS98_RS04770	SM00382	ATPases associated with a variety of cellular activities
CUGBS98_RS04770	SM00962	SRP54-type protein, GTPase domain
CUGBS98_RS04770	SM00963	SRP54-type protein, helical bundle domain
CUGBS98_RS04780	SM00387	Histidine kinase-like ATPases
CUGBS98_RS04780	SM00388	His Kinase A (phosphoacceptor) domain
CUGBS98_RS04785	SM00448	cheY-homologous receiver domain
CUGBS98_RS04785	SM00862	Transcriptional regulatory protein, C terminal
CUGBS98_RS04800	SM00382	ATPases associated with a variety of cellular activities
CUGBS98_RS04805	SM00382	ATPases associated with a variety of cellular activities
CUGBS98_RS04845	SM00904	Riboflavin kinase
CUGBS98_RS04880	SM00382	ATPases associated with a variety of cellular activities
CUGBS98_RS04885	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
CUGBS98_RS04885	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
CUGBS98_RS04885	SM00493	CUGBS98_RS04885
CUGBS98_RS04900	SM00382	ATPases associated with a variety of cellular activities
CUGBS98_RS04915	SM01266	CUGBS98_RS04915
CUGBS98_RS04940	SM00448	cheY-homologous receiver domain
CUGBS98_RS04940	SM00850	LytTr DNA-binding domain
CUGBS98_RS04945	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CUGBS98_RS05045	SM00851	MGS-like domain
CUGBS98_RS05045	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
CUGBS98_RS05045	SM01209	CUGBS98_RS05045
CUGBS98_RS05050	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
CUGBS98_RS05070	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
CUGBS98_RS05080	SM00382	ATPases associated with a variety of cellular activities
CUGBS98_RS05100	SM00155	Phospholipase D. Active site motifs.
CUGBS98_RS05120	SM00506	Appr-1"-p processing enzyme
CUGBS98_RS05170	SM00382	ATPases associated with a variety of cellular activities
CUGBS98_RS05175	SM00382	ATPases associated with a variety of cellular activities
CUGBS98_RS05205	SM00937	CUGBS98_RS05205
CUGBS98_RS05250	SM01240	CUGBS98_RS05250
CUGBS98_RS05290	SM00954	Region found in RelA / SpoT proteins
CUGBS98_RS05295	SM01118	CUGBS98_RS05295
CUGBS98_RS05300	SM01400	CUGBS98_RS05300
CUGBS98_RS05315	SM00881	CoA binding domain
CUGBS98_RS05345	SM00342	helix_turn_helix, arabinose operon control protein
CUGBS98_RS05370	SM00382	ATPases associated with a variety of cellular activities
CUGBS98_RS05385	SM00905	Dihydroneopterin aldolase
CUGBS98_RS05470	SM00530	Helix-turn-helix XRE-family like proteins 
CUGBS98_RS05495	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CUGBS98_RS05580	SM00316	Ribosomal protein S1-like RNA-binding domain
CUGBS98_RS05605	SM00434	DNA Topoisomerase IV
CUGBS98_RS05610	SM00387	Histidine kinase-like ATPases
CUGBS98_RS05610	SM00433	TopoisomeraseII
CUGBS98_RS05615	SM01207	CUGBS98_RS05615
CUGBS98_RS05635	SM00986	Uracil DNA glycosylase superfamily
CUGBS98_RS05635	SM00987	UreE urease accessory protein, C-terminal domain 
CUGBS98_RS05660	SM00858	CUGBS98_RS05660
CUGBS98_RS05775	SM00849	Metallo-beta-lactamase superfamily
CUGBS98_RS05780	SM00382	ATPases associated with a variety of cellular activities
CUGBS98_RS05810	SM00028	Tetratricopeptide repeats
CUGBS98_RS05875	SM00728	Clostridial hydrophobic, with a conserved W residue, domain.
CUGBS98_RS05920	SM00642	Alpha-amylase domain
CUGBS98_RS05930	SM00986	Uracil DNA glycosylase superfamily
CUGBS98_RS05930	SM00987	UreE urease accessory protein, C-terminal domain 
CUGBS98_RS05950	SM00465	GIY-YIG type nucleases (URI domain)
CUGBS98_RS06030	SM00479	CUGBS98_RS06030
CUGBS98_RS06030	SM00497	Intron encoded nuclease repeat motif
CUGBS98_RS06105	SM00382	ATPases associated with a variety of cellular activities
CUGBS98_RS06105	SM01086	C-terminal, D2-small domain, of ClpB protein
CUGBS98_RS06140	SM00382	ATPases associated with a variety of cellular activities
CUGBS98_RS06140	SM00994	ClpX C4-type zinc finger
CUGBS98_RS06140	SM01086	C-terminal, D2-small domain, of ClpB protein
CUGBS98_RS06180	SM00046	Diacylglycerol kinase catalytic domain (presumed)
CUGBS98_RS06215	SM00387	Histidine kinase-like ATPases
CUGBS98_RS06215	SM00388	His Kinase A (phosphoacceptor) domain
CUGBS98_RS06220	SM00448	cheY-homologous receiver domain
CUGBS98_RS06220	SM00862	Transcriptional regulatory protein, C terminal
CUGBS98_RS06225	SM00954	Region found in RelA / SpoT proteins
CUGBS98_RS06230	SM00382	ATPases associated with a variety of cellular activities
CUGBS98_RS06235	SM00382	ATPases associated with a variety of cellular activities
CUGBS98_RS06240	SM00347	helix_turn_helix multiple antibiotic resistance protein
CUGBS98_RS06255	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
CUGBS98_RS06265	SM00382	ATPases associated with a variety of cellular activities
CUGBS98_RS06270	SM00382	ATPases associated with a variety of cellular activities
CUGBS98_RS06280	SM00382	ATPases associated with a variety of cellular activities
CUGBS98_RS06320	SM00420	helix_turn_helix, Deoxyribose operon repressor
CUGBS98_RS06320	SM01134	CUGBS98_RS06320
CUGBS98_RS06330	SM00287	Bacterial SH3 domain homologues
CUGBS98_RS06390	SM00382	ATPases associated with a variety of cellular activities
CUGBS98_RS06400	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
CUGBS98_RS06405	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
CUGBS98_RS06415	SM00363	S4 RNA-binding domain
CUGBS98_RS06445	SM00854	Bacterial capsule synthesis protein PGA_cap
CUGBS98_RS06450	SM00981	CUGBS98_RS06450
CUGBS98_RS06520	SM00257	Lysin motif
CUGBS98_RS06550	SM00382	ATPases associated with a variety of cellular activities
CUGBS98_RS06575	SM01131	CUGBS98_RS06575
CUGBS98_RS06585	SM01091	Transporter associated domain
CUGBS98_RS06595	SM00729	Elongator protein 3, MiaB family, Radical SAM
CUGBS98_RS06600	SM00014	Acid phosphatase homologues
CUGBS98_RS06725	SM00400	zinc finger
CUGBS98_RS06725	SM00493	CUGBS98_RS06725
CUGBS98_RS06745	SM00062	Bacterial periplasmic substrate-binding proteins
CUGBS98_RS06745	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
CUGBS98_RS06760	SM00450	Rhodanese Homology Domain
CUGBS98_RS06785	SM00354	helix_turn _helix lactose operon repressor
CUGBS98_RS06830	SM00957	SecA DEAD-like domain
CUGBS98_RS06830	SM00958	SecA preprotein cross-linking domain
CUGBS98_RS06895	SM00487	DEAD-like helicases superfamily
CUGBS98_RS06895	SM00490	helicase superfamily c-terminal domain
CUGBS98_RS06905	SM00062	Bacterial periplasmic substrate-binding proteins
CUGBS98_RS06905	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
CUGBS98_RS06910	SM00382	ATPases associated with a variety of cellular activities
CUGBS98_RS06950	SM00363	S4 RNA-binding domain
CUGBS98_RS06985	SM00316	Ribosomal protein S1-like RNA-binding domain
CUGBS98_RS06985	SM00955	CUGBS98_RS06985
CUGBS98_RS07005	SM00382	ATPases associated with a variety of cellular activities
CUGBS98_RS07015	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
CUGBS98_RS07015	SM01232	CUGBS98_RS07015
CUGBS98_RS07020	SM00530	Helix-turn-helix XRE-family like proteins 
CUGBS98_RS07025	SM00460	Transglutaminase/protease-like homologues
CUGBS98_RS07115	SM00382	ATPases associated with a variety of cellular activities
CUGBS98_RS07120	SM00382	ATPases associated with a variety of cellular activities
CUGBS98_RS07145	SM00649	Ribosomal protein L11/L12
CUGBS98_RS07175	SM00382	ATPases associated with a variety of cellular activities
CUGBS98_RS07175	SM00843	CUGBS98_RS07175
CUGBS98_RS07190	SM00382	ATPases associated with a variety of cellular activities
CUGBS98_RS07200	SM00529	Helix-turn-helix diphteria tox regulatory element
CUGBS98_RS07200	SM00899	CUGBS98_RS07200
CUGBS98_RS07240	SM01022	CUGBS98_RS07240
CUGBS98_RS07385	SM00116	Domain in cystathionine beta-synthase and other proteins.
CUGBS98_RS07390	SM00382	ATPases associated with a variety of cellular activities
CUGBS98_RS07395	SM00382	ATPases associated with a variety of cellular activities
CUGBS98_RS07455	SM01234	CUGBS98_RS07455
CUGBS98_RS07460	SM00363	S4 RNA-binding domain
CUGBS98_RS07525	SM00967	RNA 2'-O ribose methyltransferase substrate binding
CUGBS98_RS07545	SM00062	Bacterial periplasmic substrate-binding proteins
CUGBS98_RS07580	SM00487	DEAD-like helicases superfamily
CUGBS98_RS07580	SM00490	helicase superfamily c-terminal domain
CUGBS98_RS07605	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CUGBS98_RS07605	SM00387	Histidine kinase-like ATPases
CUGBS98_RS07605	SM00388	His Kinase A (phosphoacceptor) domain
CUGBS98_RS07610	SM00448	cheY-homologous receiver domain
CUGBS98_RS07610	SM00862	Transcriptional regulatory protein, C terminal
CUGBS98_RS07650	SM00382	ATPases associated with a variety of cellular activities
CUGBS98_RS07670	SM00829	Enoylreductase
CUGBS98_RS07680	SM00382	ATPases associated with a variety of cellular activities
CUGBS98_RS07680	SM00930	CUGBS98_RS07680
CUGBS98_RS07695	SM00062	Bacterial periplasmic substrate-binding proteins
CUGBS98_RS07725	SM01120	CUGBS98_RS07725
CUGBS98_RS07745	SM00422	helix_turn_helix, mercury resistance
CUGBS98_RS07775	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CUGBS98_RS07785	SM01103	CUGBS98_RS07785
CUGBS98_RS07805	SM00845	GatB domain
CUGBS98_RS07830	SM00116	Domain in cystathionine beta-synthase and other proteins.
CUGBS98_RS07865	SM00870	CUGBS98_RS07865
CUGBS98_RS07880	SM00487	DEAD-like helicases superfamily
CUGBS98_RS07880	SM00490	helicase superfamily c-terminal domain
CUGBS98_RS07890	SM01005	Alanine racemase, C-terminal domain
CUGBS98_RS07905	SM00957	SecA DEAD-like domain
CUGBS98_RS07905	SM00958	SecA preprotein cross-linking domain
CUGBS98_RS07925	SM00640	Glycosyl hydrolases family 32
CUGBS98_RS07930	SM00354	helix_turn _helix lactose operon repressor
CUGBS98_RS07945	SM00841	Elongation factor P, C-terminal
CUGBS98_RS07945	SM01185	CUGBS98_RS07945
CUGBS98_RS07985	SM00382	ATPases associated with a variety of cellular activities
CUGBS98_RS08015	SM00478	endonuclease III
CUGBS98_RS08020	SM00530	Helix-turn-helix XRE-family like proteins 
CUGBS98_RS08030	SM00014	Acid phosphatase homologues
CUGBS98_RS08035	SM00463	Small MutS-related domain
CUGBS98_RS08035	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
CUGBS98_RS08035	SM00534	ATPase domain of DNA mismatch repair MUTS family
CUGBS98_RS08060	SM00382	ATPases associated with a variety of cellular activities
CUGBS98_RS08115	SM00419	helix_turn_helix, cAMP Regulatory protein
CUGBS98_RS08120	SM00939	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
CUGBS98_RS08120	SM00940	X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal
CUGBS98_RS08135	SM00382	ATPases associated with a variety of cellular activities
CUGBS98_RS08140	SM00382	ATPases associated with a variety of cellular activities
CUGBS98_RS08180	SM00861	Transketolase, pyrimidine binding domain
CUGBS98_RS08255	SM00530	Helix-turn-helix XRE-family like proteins 
CUGBS98_RS08295	SM00889	Elongation factor G, domain IV
CUGBS98_RS08300	SM00530	Helix-turn-helix XRE-family like proteins 
CUGBS98_RS08355	SM00422	helix_turn_helix, mercury resistance
CUGBS98_RS08360	SM00479	CUGBS98_RS08360
CUGBS98_RS08410	SM00849	Metallo-beta-lactamase superfamily
CUGBS98_RS08420	SM01230	CUGBS98_RS08420
CUGBS98_RS08425	SM00422	helix_turn_helix, mercury resistance
CUGBS98_RS08445	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
CUGBS98_RS08450	SM00838	Elongation factor G C-terminus
CUGBS98_RS08450	SM00889	Elongation factor G, domain IV
CUGBS98_RS08480	SM00983	Thiamin pyrophosphokinase, vitamin B1 binding domain
CUGBS98_RS08500	SM00650	Ribosomal RNA adenine dimethylases
CUGBS98_RS08510	SM00493	CUGBS98_RS08510
CUGBS98_RS08565	SM00387	Histidine kinase-like ATPases
CUGBS98_RS08565	SM00388	His Kinase A (phosphoacceptor) domain
CUGBS98_RS08570	SM00448	cheY-homologous receiver domain
CUGBS98_RS08570	SM00862	Transcriptional regulatory protein, C terminal
CUGBS98_RS08590	SM00382	ATPases associated with a variety of cellular activities
CUGBS98_RS08640	SM00354	helix_turn _helix lactose operon repressor
CUGBS98_RS08650	SM01007	Class II Aldolase and Adducin N-terminal domain
CUGBS98_RS08660	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
CUGBS98_RS08690	SM00788	Adenylosuccinate synthetase
CUGBS98_RS08740	SM00382	ATPases associated with a variety of cellular activities
CUGBS98_RS08740	SM01086	C-terminal, D2-small domain, of ClpB protein
CUGBS98_RS08810	SM00100	Cyclic nucleotide-monophosphate binding domain
CUGBS98_RS08820	SM00354	helix_turn _helix lactose operon repressor
CUGBS98_RS08840	SM00347	helix_turn_helix multiple antibiotic resistance protein
CUGBS98_RS08845	SM00479	CUGBS98_RS08845
CUGBS98_RS08845	SM00481	DNA polymerase alpha chain like domain
CUGBS98_RS08850	SM00047	Lysozyme subfamily 2
CUGBS98_RS08875	SM01323	CUGBS98_RS08875
CUGBS98_RS08885	SM00919	Malic enzyme, NAD binding domain
CUGBS98_RS08885	SM01274	CUGBS98_RS08885
CUGBS98_RS08900	SM00448	cheY-homologous receiver domain
CUGBS98_RS08910	SM00642	Alpha-amylase domain
CUGBS98_RS08915	SM00382	ATPases associated with a variety of cellular activities
CUGBS98_RS08930	SM01133	CUGBS98_RS08930
CUGBS98_RS08975	SM00420	helix_turn_helix, Deoxyribose operon repressor
CUGBS98_RS08975	SM01134	CUGBS98_RS08975
CUGBS98_RS08995	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CUGBS98_RS08995	SM00954	Region found in RelA / SpoT proteins
CUGBS98_RS09030	SM00342	helix_turn_helix, arabinose operon control protein
CUGBS98_RS09030	SM00448	cheY-homologous receiver domain
CUGBS98_RS09110	SM00387	Histidine kinase-like ATPases
CUGBS98_RS09110	SM00388	His Kinase A (phosphoacceptor) domain
CUGBS98_RS09115	SM00448	cheY-homologous receiver domain
CUGBS98_RS09115	SM00862	Transcriptional regulatory protein, C terminal
CUGBS98_RS09125	SM00382	ATPases associated with a variety of cellular activities
CUGBS98_RS09165	SM00422	helix_turn_helix, mercury resistance
CUGBS98_RS09195	SM00382	ATPases associated with a variety of cellular activities
CUGBS98_RS09205	SM00901	CUGBS98_RS09205
CUGBS98_RS09240	SM00530	Helix-turn-helix XRE-family like proteins 
CUGBS98_RS09360	SM00382	ATPases associated with a variety of cellular activities
CUGBS98_RS09370	SM00530	Helix-turn-helix XRE-family like proteins 
CUGBS98_RS09375	SM00014	Acid phosphatase homologues
CUGBS98_RS09395	SM00450	Rhodanese Homology Domain
CUGBS98_RS09450	SM00387	Histidine kinase-like ATPases
CUGBS98_RS09450	SM00388	His Kinase A (phosphoacceptor) domain
CUGBS98_RS09490	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
CUGBS98_RS09490	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
CUGBS98_RS09530	SM01133	CUGBS98_RS09530
CUGBS98_RS09545	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CUGBS98_RS09560	SM00883	Chaperonin 10 Kd subunit
CUGBS98_RS09565	SM00382	ATPases associated with a variety of cellular activities
CUGBS98_RS09635	SM00732	Likely ribonuclease with RNase H fold.
CUGBS98_RS09650	SM00382	ATPases associated with a variety of cellular activities
CUGBS98_RS09655	SM00852	Probable molybdopterin binding domain
CUGBS98_RS09665	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CUGBS98_RS09675	SM00853	MutL C terminal dimerisation domain
CUGBS98_RS09675	SM01340	CUGBS98_RS09675
CUGBS98_RS09680	SM00357	Cold shock protein domain
CUGBS98_RS09685	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
CUGBS98_RS09685	SM00534	ATPase domain of DNA mismatch repair MUTS family
CUGBS98_RS09695	SM00836	DALR anticodon binding domain
CUGBS98_RS09695	SM01016	Arginyl tRNA synthetase N terminal dom
CUGBS98_RS09745	SM00530	Helix-turn-helix XRE-family like proteins 
CUGBS98_RS09795	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CUGBS98_RS09860	SM00448	cheY-homologous receiver domain
CUGBS98_RS09860	SM00862	Transcriptional regulatory protein, C terminal
CUGBS98_RS09865	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CUGBS98_RS09865	SM00387	Histidine kinase-like ATPases
CUGBS98_RS09865	SM00388	His Kinase A (phosphoacceptor) domain
CUGBS98_RS09885	SM00387	Histidine kinase-like ATPases
CUGBS98_RS09890	SM00448	cheY-homologous receiver domain
CUGBS98_RS09895	SM00382	ATPases associated with a variety of cellular activities
CUGBS98_RS09960	SM00885	D5 N terminal like
CUGBS98_RS09965	SM00942	Primase C terminal 1 (PriCT-1)
CUGBS98_RS10000	SM01040	BRO family, N-terminal domain
CUGBS98_RS10010	SM00530	Helix-turn-helix XRE-family like proteins 
CUGBS98_RS10040	SM00363	S4 RNA-binding domain
CUGBS98_RS10040	SM01390	CUGBS98_RS10040
CUGBS98_RS10065	SM01228	CUGBS98_RS10065
CUGBS98_RS10095	SM00257	Lysin motif
CUGBS98_RS10105	SM00382	ATPases associated with a variety of cellular activities
CUGBS98_RS10110	SM00382	ATPases associated with a variety of cellular activities
CUGBS98_RS10145	SM00530	Helix-turn-helix XRE-family like proteins 
CUGBS98_RS10150	SM00116	Domain in cystathionine beta-synthase and other proteins.
CUGBS98_RS10150	SM01240	CUGBS98_RS10150
CUGBS98_RS10160	SM00419	helix_turn_helix, cAMP Regulatory protein
CUGBS98_RS10165	SM00873	B3/4 domain
CUGBS98_RS10210	SM00382	ATPases associated with a variety of cellular activities
CUGBS98_RS10240	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CUGBS98_RS10245	SM00470	ParB-like nuclease domain
