A6J82_RS00010	SM00420	helix_turn_helix, Deoxyribose operon repressor
A6J82_RS00010	SM01134	A6J82_RS00010
A6J82_RS00020	SM00316	Ribosomal protein S1-like RNA-binding domain
A6J82_RS00030	SM00421	helix_turn_helix, Lux Regulon
A6J82_RS00030	SM00448	cheY-homologous receiver domain
A6J82_RS00045	SM00220	Serine/Threonine protein kinases, catalytic domain
A6J82_RS00045	SM00740	A6J82_RS00045
A6J82_RS00050	SM00331	Sigma factor PP2C-like phosphatases
A6J82_RS00050	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
A6J82_RS00065	SM00487	DEAD-like helicases superfamily
A6J82_RS00065	SM00490	helicase superfamily c-terminal domain
A6J82_RS00070	SM01409	A6J82_RS00070
A6J82_RS00075	SM00072	Guanylate kinase homologues.
A6J82_RS00085	SM00421	helix_turn_helix, Lux Regulon
A6J82_RS00085	SM00448	cheY-homologous receiver domain
A6J82_RS00105	SM00382	ATPases associated with a variety of cellular activities
A6J82_RS00115	SM00322	K homology RNA-binding domain
A6J82_RS00115	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
A6J82_RS00195	SM00382	ATPases associated with a variety of cellular activities
A6J82_RS00205	SM00062	Bacterial periplasmic substrate-binding proteins
A6J82_RS00210	SM00487	DEAD-like helicases superfamily
A6J82_RS00210	SM00490	helicase superfamily c-terminal domain
A6J82_RS00220	SM00740	A6J82_RS00220
A6J82_RS00255	SM00382	ATPases associated with a variety of cellular activities
A6J82_RS00265	SM00861	Transketolase, pyrimidine binding domain
A6J82_RS00345	SM00382	ATPases associated with a variety of cellular activities
A6J82_RS00470	SM00116	Domain in cystathionine beta-synthase and other proteins.
A6J82_RS00470	SM00382	ATPases associated with a variety of cellular activities
A6J82_RS00495	SM00530	Helix-turn-helix XRE-family like proteins 
A6J82_RS00600	SM00530	Helix-turn-helix XRE-family like proteins 
A6J82_RS00640	SM00967	RNA 2'-O ribose methyltransferase substrate binding
A6J82_RS00655	SM00840	A6J82_RS00655
A6J82_RS00675	SM00316	Ribosomal protein S1-like RNA-binding domain
A6J82_RS00675	SM00322	K homology RNA-binding domain
A6J82_RS00680	SM01387	A6J82_RS00680
A6J82_RS00690	SM00861	Transketolase, pyrimidine binding domain
A6J82_RS00715	SM00642	Alpha-amylase domain
A6J82_RS00725	SM00382	ATPases associated with a variety of cellular activities
A6J82_RS00730	SM00382	ATPases associated with a variety of cellular activities
A6J82_RS00765	SM00448	cheY-homologous receiver domain
A6J82_RS00765	SM00850	LytTr DNA-binding domain
A6J82_RS00770	SM00387	Histidine kinase-like ATPases
A6J82_RS00880	SM00663	RNA polymerase I subunit A N-terminus
A6J82_RS00895	SM00363	S4 RNA-binding domain
A6J82_RS00935	SM00885	D5 N terminal like
A6J82_RS00940	SM00942	Primase C terminal 1 (PriCT-1)
A6J82_RS00975	SM01040	BRO family, N-terminal domain
A6J82_RS00990	SM00530	Helix-turn-helix XRE-family like proteins 
A6J82_RS01005	SM00892	DNA/RNA non-specific endonuclease
A6J82_RS01015	SM00382	ATPases associated with a variety of cellular activities
A6J82_RS01020	SM00347	helix_turn_helix multiple antibiotic resistance protein
A6J82_RS01055	SM00382	ATPases associated with a variety of cellular activities
A6J82_RS01060	SM00382	ATPases associated with a variety of cellular activities
A6J82_RS01080	SM00936	Penicillin-binding protein 5, C-terminal domain 
A6J82_RS01110	SM00382	ATPases associated with a variety of cellular activities
A6J82_RS01145	SM00062	Bacterial periplasmic substrate-binding proteins
A6J82_RS01150	SM00382	ATPases associated with a variety of cellular activities
A6J82_RS01165	SM00244	prohibitin homologues
A6J82_RS01170	SM01120	A6J82_RS01170
A6J82_RS01170	SM01121	A6J82_RS01170
A6J82_RS01205	SM00387	Histidine kinase-like ATPases
A6J82_RS01205	SM00388	His Kinase A (phosphoacceptor) domain
A6J82_RS01210	SM00448	cheY-homologous receiver domain
A6J82_RS01210	SM00862	Transcriptional regulatory protein, C terminal
A6J82_RS01215	SM00382	ATPases associated with a variety of cellular activities
A6J82_RS01230	SM00354	helix_turn _helix lactose operon repressor
A6J82_RS01245	SM00382	ATPases associated with a variety of cellular activities
A6J82_RS01270	SM00947	Carbonic anhydrase
A6J82_RS01275	SM00382	ATPases associated with a variety of cellular activities
A6J82_RS01335	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A6J82_RS01340	SM00271	DnaJ molecular chaperone homology domain
A6J82_RS01360	SM00047	Lysozyme subfamily 2
A6J82_RS01370	SM00855	Phosphoglycerate mutase family
A6J82_RS01505	SM00662	RNA polymerases D
A6J82_RS01525	SM00316	Ribosomal protein S1-like RNA-binding domain
A6J82_RS01580	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
A6J82_RS01585	SM01374	A6J82_RS01585
A6J82_RS01605	SM00322	K homology RNA-binding domain
A6J82_RS01620	SM01382	A6J82_RS01620
A6J82_RS01620	SM01383	A6J82_RS01620
A6J82_RS01640	SM01403	A6J82_RS01640
A6J82_RS01655	SM00829	Enoylreductase
A6J82_RS01670	SM00698	Possible plasma membrane-binding motif in junctophilins, PIP-5-kinases and protein kinases.
A6J82_RS01675	SM00226	Low molecular weight phosphatase family
A6J82_RS01680	SM00382	ATPases associated with a variety of cellular activities
A6J82_RS01690	SM00998	Adenylosuccinate lyase C-terminus
A6J82_RS01725	SM01001	AIR carboxylase
A6J82_RS01730	SM01209	A6J82_RS01730
A6J82_RS01730	SM01210	A6J82_RS01730
A6J82_RS01750	SM01130	A6J82_RS01750
A6J82_RS01785	SM00257	Lysin motif
A6J82_RS01795	SM00798	AICARFT/IMPCHase bienzyme
A6J82_RS01795	SM00851	MGS-like domain
A6J82_RS01825	SM01211	A6J82_RS01825
A6J82_RS01865	SM01400	A6J82_RS01865
A6J82_RS02045	SM00382	ATPases associated with a variety of cellular activities
A6J82_RS02075	SM00363	S4 RNA-binding domain
A6J82_RS02115	SM00046	Diacylglycerol kinase catalytic domain (presumed)
A6J82_RS02125	SM00480	DNA polymerase III beta subunit
A6J82_RS02130	SM00382	ATPases associated with a variety of cellular activities
A6J82_RS02130	SM00760	Bacterial dnaA protein helix-turn-helix domain
A6J82_RS02135	SM00470	ParB-like nuclease domain
A6J82_RS02140	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
A6J82_RS02170	SM00382	ATPases associated with a variety of cellular activities
A6J82_RS02215	SM00873	B3/4 domain
A6J82_RS02220	SM00419	helix_turn_helix, cAMP Regulatory protein
A6J82_RS02230	SM00116	Domain in cystathionine beta-synthase and other proteins.
A6J82_RS02230	SM01240	A6J82_RS02230
A6J82_RS02235	SM00530	Helix-turn-helix XRE-family like proteins 
A6J82_RS02280	SM00382	ATPases associated with a variety of cellular activities
A6J82_RS02285	SM00382	ATPases associated with a variety of cellular activities
A6J82_RS02295	SM00257	Lysin motif
A6J82_RS02330	SM01228	A6J82_RS02330
A6J82_RS02355	SM00363	S4 RNA-binding domain
A6J82_RS02355	SM01390	A6J82_RS02355
A6J82_RS02375	SM00530	Helix-turn-helix XRE-family like proteins 
A6J82_RS02385	SM01040	BRO family, N-terminal domain
A6J82_RS02390	SM01040	BRO family, N-terminal domain
A6J82_RS02430	SM00942	Primase C terminal 1 (PriCT-1)
A6J82_RS02515	SM00382	ATPases associated with a variety of cellular activities
A6J82_RS02520	SM00448	cheY-homologous receiver domain
A6J82_RS02525	SM00387	Histidine kinase-like ATPases
A6J82_RS02550	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A6J82_RS02550	SM00387	Histidine kinase-like ATPases
A6J82_RS02550	SM00388	His Kinase A (phosphoacceptor) domain
A6J82_RS02555	SM00448	cheY-homologous receiver domain
A6J82_RS02555	SM00862	Transcriptional regulatory protein, C terminal
A6J82_RS02610	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
A6J82_RS02635	SM00530	Helix-turn-helix XRE-family like proteins 
A6J82_RS02715	SM00836	DALR anticodon binding domain
A6J82_RS02715	SM01016	Arginyl tRNA synthetase N terminal dom
A6J82_RS02725	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
A6J82_RS02725	SM00534	ATPase domain of DNA mismatch repair MUTS family
A6J82_RS02730	SM00357	Cold shock protein domain
A6J82_RS02740	SM00853	MutL C terminal dimerisation domain
A6J82_RS02740	SM01340	A6J82_RS02740
A6J82_RS02750	SM00278	Helix-hairpin-helix DNA-binding motif class 1
A6J82_RS02760	SM00852	Probable molybdopterin binding domain
A6J82_RS02765	SM00382	ATPases associated with a variety of cellular activities
A6J82_RS02780	SM00732	Likely ribonuclease with RNase H fold.
A6J82_RS02850	SM00382	ATPases associated with a variety of cellular activities
A6J82_RS02855	SM00883	Chaperonin 10 Kd subunit
A6J82_RS02870	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A6J82_RS02885	SM01133	A6J82_RS02885
A6J82_RS02930	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
A6J82_RS02930	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
A6J82_RS02965	SM00387	Histidine kinase-like ATPases
A6J82_RS02965	SM00388	His Kinase A (phosphoacceptor) domain
A6J82_RS02970	SM00448	cheY-homologous receiver domain
A6J82_RS02970	SM00862	Transcriptional regulatory protein, C terminal
A6J82_RS03030	SM00450	Rhodanese Homology Domain
A6J82_RS03050	SM00014	Acid phosphatase homologues
A6J82_RS03060	SM00530	Helix-turn-helix XRE-family like proteins 
A6J82_RS03140	SM00382	ATPases associated with a variety of cellular activities
A6J82_RS03150	SM00530	Helix-turn-helix XRE-family like proteins 
A6J82_RS03205	SM00382	ATPases associated with a variety of cellular activities
A6J82_RS03215	SM00448	cheY-homologous receiver domain
A6J82_RS03215	SM00862	Transcriptional regulatory protein, C terminal
A6J82_RS03220	SM00387	Histidine kinase-like ATPases
A6J82_RS03220	SM00388	His Kinase A (phosphoacceptor) domain
A6J82_RS03235	SM00448	cheY-homologous receiver domain
A6J82_RS03235	SM00850	LytTr DNA-binding domain
A6J82_RS03245	SM00382	ATPases associated with a variety of cellular activities
A6J82_RS03290	SM00342	helix_turn_helix, arabinose operon control protein
A6J82_RS03290	SM00448	cheY-homologous receiver domain
A6J82_RS03320	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
A6J82_RS03320	SM00954	Region found in RelA / SpoT proteins
A6J82_RS03340	SM00420	helix_turn_helix, Deoxyribose operon repressor
A6J82_RS03340	SM01134	A6J82_RS03340
A6J82_RS03380	SM01133	A6J82_RS03380
A6J82_RS03395	SM00382	ATPases associated with a variety of cellular activities
A6J82_RS03400	SM00642	Alpha-amylase domain
A6J82_RS03410	SM00448	cheY-homologous receiver domain
A6J82_RS03440	SM01323	A6J82_RS03440
A6J82_RS03465	SM00047	Lysozyme subfamily 2
A6J82_RS03470	SM00479	A6J82_RS03470
A6J82_RS03470	SM00481	DNA polymerase alpha chain like domain
A6J82_RS03475	SM00347	helix_turn_helix multiple antibiotic resistance protein
A6J82_RS03545	SM00354	helix_turn _helix lactose operon repressor
A6J82_RS03555	SM00100	Cyclic nucleotide-monophosphate binding domain
A6J82_RS03630	SM00530	Helix-turn-helix XRE-family like proteins 
A6J82_RS03695	SM00382	ATPases associated with a variety of cellular activities
A6J82_RS03695	SM01086	C-terminal, D2-small domain, of ClpB protein
A6J82_RS03745	SM00788	Adenylosuccinate synthetase
A6J82_RS03775	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
A6J82_RS03785	SM01007	Class II Aldolase and Adducin N-terminal domain
A6J82_RS03850	SM00382	ATPases associated with a variety of cellular activities
A6J82_RS03885	SM00530	Helix-turn-helix XRE-family like proteins 
A6J82_RS03935	SM00889	Elongation factor G, domain IV
A6J82_RS03960	SM00650	Ribosomal RNA adenine dimethylases
A6J82_RS03970	SM00857	Resolvase, N terminal domain
A6J82_RS03980	SM00530	Helix-turn-helix XRE-family like proteins 
A6J82_RS04035	SM00448	cheY-homologous receiver domain
A6J82_RS04035	SM00862	Transcriptional regulatory protein, C terminal
A6J82_RS04040	SM00387	Histidine kinase-like ATPases
A6J82_RS04040	SM00388	His Kinase A (phosphoacceptor) domain
A6J82_RS04095	SM00493	A6J82_RS04095
A6J82_RS04105	SM00650	Ribosomal RNA adenine dimethylases
A6J82_RS04125	SM00983	Thiamin pyrophosphokinase, vitamin B1 binding domain
A6J82_RS04155	SM00838	Elongation factor G C-terminus
A6J82_RS04155	SM00889	Elongation factor G, domain IV
A6J82_RS04160	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
A6J82_RS04185	SM00422	helix_turn_helix, mercury resistance
A6J82_RS04190	SM01230	A6J82_RS04190
A6J82_RS04200	SM00849	Metallo-beta-lactamase superfamily
A6J82_RS04255	SM00479	A6J82_RS04255
A6J82_RS04260	SM00422	helix_turn_helix, mercury resistance
A6J82_RS04305	SM00382	ATPases associated with a variety of cellular activities
A6J82_RS04310	SM00382	ATPases associated with a variety of cellular activities
A6J82_RS04325	SM00939	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
A6J82_RS04325	SM00940	X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal
A6J82_RS04330	SM00419	helix_turn_helix, cAMP Regulatory protein
A6J82_RS04400	SM00382	ATPases associated with a variety of cellular activities
A6J82_RS04425	SM00463	Small MutS-related domain
A6J82_RS04425	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
A6J82_RS04425	SM00534	ATPase domain of DNA mismatch repair MUTS family
A6J82_RS04430	SM00014	Acid phosphatase homologues
A6J82_RS04440	SM00530	Helix-turn-helix XRE-family like proteins 
A6J82_RS04445	SM00478	endonuclease III
A6J82_RS04475	SM00382	ATPases associated with a variety of cellular activities
A6J82_RS04505	SM00347	helix_turn_helix multiple antibiotic resistance protein
A6J82_RS04505	SM00529	Helix-turn-helix diphteria tox regulatory element
A6J82_RS04540	SM00382	ATPases associated with a variety of cellular activities
A6J82_RS04545	SM00382	ATPases associated with a variety of cellular activities
A6J82_RS04560	SM00841	Elongation factor P, C-terminal
A6J82_RS04560	SM01185	A6J82_RS04560
A6J82_RS04575	SM00354	helix_turn _helix lactose operon repressor
A6J82_RS04580	SM00640	Glycosyl hydrolases family 32
A6J82_RS04610	SM00957	SecA DEAD-like domain
A6J82_RS04610	SM00958	SecA preprotein cross-linking domain
A6J82_RS04625	SM01005	Alanine racemase, C-terminal domain
A6J82_RS04635	SM00487	DEAD-like helicases superfamily
A6J82_RS04635	SM00490	helicase superfamily c-terminal domain
A6J82_RS04650	SM00870	A6J82_RS04650
A6J82_RS04685	SM00116	Domain in cystathionine beta-synthase and other proteins.
A6J82_RS04710	SM00845	GatB domain
A6J82_RS04730	SM01103	A6J82_RS04730
A6J82_RS04740	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
A6J82_RS04770	SM00422	helix_turn_helix, mercury resistance
A6J82_RS04790	SM01120	A6J82_RS04790
A6J82_RS04830	SM00062	Bacterial periplasmic substrate-binding proteins
A6J82_RS04845	SM00382	ATPases associated with a variety of cellular activities
A6J82_RS04845	SM00930	A6J82_RS04845
A6J82_RS04860	SM00829	Enoylreductase
A6J82_RS04880	SM00382	ATPases associated with a variety of cellular activities
A6J82_RS04920	SM00448	cheY-homologous receiver domain
A6J82_RS04920	SM00862	Transcriptional regulatory protein, C terminal
A6J82_RS04925	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A6J82_RS04925	SM00387	Histidine kinase-like ATPases
A6J82_RS04925	SM00388	His Kinase A (phosphoacceptor) domain
A6J82_RS04950	SM00487	DEAD-like helicases superfamily
A6J82_RS04950	SM00490	helicase superfamily c-terminal domain
A6J82_RS04990	SM00062	Bacterial periplasmic substrate-binding proteins
A6J82_RS05010	SM00967	RNA 2'-O ribose methyltransferase substrate binding
A6J82_RS05075	SM00363	S4 RNA-binding domain
A6J82_RS05080	SM01234	A6J82_RS05080
A6J82_RS05140	SM00382	ATPases associated with a variety of cellular activities
A6J82_RS05150	SM00116	Domain in cystathionine beta-synthase and other proteins.
A6J82_RS05380	SM00529	Helix-turn-helix diphteria tox regulatory element
A6J82_RS05380	SM00899	A6J82_RS05380
A6J82_RS05390	SM00382	ATPases associated with a variety of cellular activities
A6J82_RS05405	SM00382	ATPases associated with a variety of cellular activities
A6J82_RS05405	SM00843	A6J82_RS05405
A6J82_RS05440	SM00649	Ribosomal protein L11/L12
A6J82_RS05585	SM00460	Transglutaminase/protease-like homologues
A6J82_RS05590	SM00530	Helix-turn-helix XRE-family like proteins 
A6J82_RS05595	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
A6J82_RS05595	SM01232	A6J82_RS05595
A6J82_RS05605	SM00382	ATPases associated with a variety of cellular activities
A6J82_RS05630	SM00316	Ribosomal protein S1-like RNA-binding domain
A6J82_RS05630	SM00955	A6J82_RS05630
A6J82_RS05665	SM00363	S4 RNA-binding domain
A6J82_RS05705	SM00382	ATPases associated with a variety of cellular activities
A6J82_RS05710	SM00062	Bacterial periplasmic substrate-binding proteins
A6J82_RS05710	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
A6J82_RS05720	SM00487	DEAD-like helicases superfamily
A6J82_RS05720	SM00490	helicase superfamily c-terminal domain
A6J82_RS05790	SM00957	SecA DEAD-like domain
A6J82_RS05790	SM00958	SecA preprotein cross-linking domain
A6J82_RS05835	SM00354	helix_turn _helix lactose operon repressor
A6J82_RS05865	SM00450	Rhodanese Homology Domain
A6J82_RS05875	SM00062	Bacterial periplasmic substrate-binding proteins
A6J82_RS05875	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
A6J82_RS05895	SM00400	zinc finger
A6J82_RS05895	SM00493	A6J82_RS05895
A6J82_RS06035	SM00014	Acid phosphatase homologues
A6J82_RS06040	SM00729	Elongator protein 3, MiaB family, Radical SAM
A6J82_RS06050	SM01091	Transporter associated domain
A6J82_RS06060	SM01131	A6J82_RS06060
A6J82_RS06085	SM00382	ATPases associated with a variety of cellular activities
A6J82_RS06115	SM00257	Lysin motif
A6J82_RS06185	SM00981	A6J82_RS06185
A6J82_RS06190	SM00854	Bacterial capsule synthesis protein PGA_cap
A6J82_RS06220	SM00363	S4 RNA-binding domain
A6J82_RS06230	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
A6J82_RS06235	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
A6J82_RS06245	SM00382	ATPases associated with a variety of cellular activities
A6J82_RS06305	SM00287	Bacterial SH3 domain homologues
A6J82_RS06315	SM00420	helix_turn_helix, Deoxyribose operon repressor
A6J82_RS06315	SM01134	A6J82_RS06315
A6J82_RS06365	SM00382	ATPases associated with a variety of cellular activities
A6J82_RS06375	SM00382	ATPases associated with a variety of cellular activities
A6J82_RS06380	SM00382	ATPases associated with a variety of cellular activities
A6J82_RS06390	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
A6J82_RS06405	SM00347	helix_turn_helix multiple antibiotic resistance protein
A6J82_RS06410	SM00382	ATPases associated with a variety of cellular activities
A6J82_RS06415	SM00382	ATPases associated with a variety of cellular activities
A6J82_RS06420	SM00954	Region found in RelA / SpoT proteins
A6J82_RS06425	SM00448	cheY-homologous receiver domain
A6J82_RS06425	SM00862	Transcriptional regulatory protein, C terminal
A6J82_RS06430	SM00387	Histidine kinase-like ATPases
A6J82_RS06430	SM00388	His Kinase A (phosphoacceptor) domain
A6J82_RS06465	SM00046	Diacylglycerol kinase catalytic domain (presumed)
A6J82_RS06505	SM00382	ATPases associated with a variety of cellular activities
A6J82_RS06505	SM00994	ClpX C4-type zinc finger
A6J82_RS06505	SM01086	C-terminal, D2-small domain, of ClpB protein
A6J82_RS06545	SM00382	ATPases associated with a variety of cellular activities
A6J82_RS06545	SM01086	C-terminal, D2-small domain, of ClpB protein
A6J82_RS06620	SM00479	A6J82_RS06620
A6J82_RS06620	SM00497	Intron encoded nuclease repeat motif
A6J82_RS06700	SM00465	GIY-YIG type nucleases (URI domain)
A6J82_RS06720	SM00986	Uracil DNA glycosylase superfamily
A6J82_RS06720	SM00987	UreE urease accessory protein, C-terminal domain 
A6J82_RS06730	SM00642	Alpha-amylase domain
A6J82_RS06790	SM00728	Clostridial hydrophobic, with a conserved W residue, domain.
A6J82_RS06860	SM00028	Tetratricopeptide repeats
A6J82_RS06890	SM00382	ATPases associated with a variety of cellular activities
A6J82_RS06895	SM00849	Metallo-beta-lactamase superfamily
A6J82_RS07030	SM00858	A6J82_RS07030
A6J82_RS07055	SM00986	Uracil DNA glycosylase superfamily
A6J82_RS07055	SM00987	UreE urease accessory protein, C-terminal domain 
A6J82_RS07060	SM01207	A6J82_RS07060
A6J82_RS07065	SM00387	Histidine kinase-like ATPases
A6J82_RS07065	SM00433	TopoisomeraseII
A6J82_RS07070	SM00434	DNA Topoisomerase IV
A6J82_RS07095	SM00316	Ribosomal protein S1-like RNA-binding domain
A6J82_RS07215	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A6J82_RS07240	SM00530	Helix-turn-helix XRE-family like proteins 
A6J82_RS07315	SM00905	Dihydroneopterin aldolase
A6J82_RS07330	SM00382	ATPases associated with a variety of cellular activities
A6J82_RS07355	SM00342	helix_turn_helix, arabinose operon control protein
A6J82_RS07390	SM00881	CoA binding domain
A6J82_RS07405	SM01400	A6J82_RS07405
A6J82_RS07410	SM01118	A6J82_RS07410
A6J82_RS07415	SM00954	Region found in RelA / SpoT proteins
A6J82_RS07455	SM01240	A6J82_RS07455
A6J82_RS07500	SM00937	A6J82_RS07500
A6J82_RS07530	SM00382	ATPases associated with a variety of cellular activities
A6J82_RS07535	SM00382	ATPases associated with a variety of cellular activities
A6J82_RS07595	SM00506	Appr-1"-p processing enzyme
A6J82_RS07615	SM00155	Phospholipase D. Active site motifs.
A6J82_RS07625	SM00859	Semialdehyde dehydrogenase, NAD binding domain
A6J82_RS07635	SM00382	ATPases associated with a variety of cellular activities
A6J82_RS07645	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
A6J82_RS07665	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
A6J82_RS07670	SM00851	MGS-like domain
A6J82_RS07670	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
A6J82_RS07670	SM01209	A6J82_RS07670
A6J82_RS07815	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
A6J82_RS07820	SM00448	cheY-homologous receiver domain
A6J82_RS07820	SM00850	LytTr DNA-binding domain
A6J82_RS07845	SM01266	A6J82_RS07845
A6J82_RS07860	SM00382	ATPases associated with a variety of cellular activities
A6J82_RS07875	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
A6J82_RS07875	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
A6J82_RS07875	SM00493	A6J82_RS07875
A6J82_RS07880	SM00382	ATPases associated with a variety of cellular activities
A6J82_RS07915	SM00904	Riboflavin kinase
A6J82_RS07955	SM00382	ATPases associated with a variety of cellular activities
A6J82_RS07960	SM00382	ATPases associated with a variety of cellular activities
A6J82_RS07975	SM00448	cheY-homologous receiver domain
A6J82_RS07975	SM00862	Transcriptional regulatory protein, C terminal
A6J82_RS07980	SM00387	Histidine kinase-like ATPases
A6J82_RS07980	SM00388	His Kinase A (phosphoacceptor) domain
A6J82_RS07990	SM00382	ATPases associated with a variety of cellular activities
A6J82_RS07990	SM00962	SRP54-type protein, GTPase domain
A6J82_RS07990	SM00963	SRP54-type protein, helical bundle domain
A6J82_RS08015	SM00387	Histidine kinase-like ATPases
A6J82_RS08030	SM00382	ATPases associated with a variety of cellular activities
A6J82_RS08035	SM00245	tail specific protease
A6J82_RS08060	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A6J82_RS08060	SM00866	A6J82_RS08060
A6J82_RS08100	SM00434	DNA Topoisomerase IV
A6J82_RS08125	SM00382	ATPases associated with a variety of cellular activities
A6J82_RS08155	SM00062	Bacterial periplasmic substrate-binding proteins
A6J82_RS08160	SM00382	ATPases associated with a variety of cellular activities
A6J82_RS08200	SM00481	DNA polymerase alpha chain like domain
A6J82_RS08205	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A6J82_RS08210	SM00382	ATPases associated with a variety of cellular activities
A6J82_RS08250	SM00831	Cation transporter/ATPase, N-terminus
A6J82_RS08265	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
A6J82_RS08270	SM00365	Leucine-rich repeat, SDS22-like subfamily
A6J82_RS08270	SM00369	Leucine-rich repeats, typical (most populated) subfamily
A6J82_RS08275	SM00838	Elongation factor G C-terminus
A6J82_RS08280	SM00562	A6J82_RS08280
A6J82_RS08330	SM00729	Elongator protein 3, MiaB family, Radical SAM
A6J82_RS08395	SM00861	Transketolase, pyrimidine binding domain
A6J82_RS08405	SM00382	ATPases associated with a variety of cellular activities
A6J82_RS08445	SM00873	B3/4 domain
A6J82_RS08445	SM00874	tRNA synthetase B5 domain
A6J82_RS08445	SM00896	Ferredoxin-fold anticodon binding domain
A6J82_RS08460	SM00892	DNA/RNA non-specific endonuclease
A6J82_RS08485	SM00382	ATPases associated with a variety of cellular activities
A6J82_RS08535	SM00642	Alpha-amylase domain
A6J82_RS08540	SM00642	Alpha-amylase domain
A6J82_RS08550	SM00278	Helix-hairpin-helix DNA-binding motif class 1
A6J82_RS08550	SM00292	breast cancer carboxy-terminal domain
A6J82_RS08550	SM00532	Ligase N family
A6J82_RS08575	SM00116	Domain in cystathionine beta-synthase and other proteins.
A6J82_RS08615	SM00382	ATPases associated with a variety of cellular activities
A6J82_RS08665	SM00382	ATPases associated with a variety of cellular activities
A6J82_RS08690	SM00487	DEAD-like helicases superfamily
A6J82_RS08690	SM00490	helicase superfamily c-terminal domain
A6J82_RS08750	SM00530	Helix-turn-helix XRE-family like proteins 
A6J82_RS08770	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
A6J82_RS08815	SM00363	S4 RNA-binding domain
A6J82_RS08840	SM00347	helix_turn_helix multiple antibiotic resistance protein
A6J82_RS08875	SM01061	CAT RNA binding domain
A6J82_RS08900	SM00354	helix_turn _helix lactose operon repressor
A6J82_RS08910	SM00849	Metallo-beta-lactamase superfamily
A6J82_RS08915	SM00278	Helix-hairpin-helix DNA-binding motif class 1
A6J82_RS08920	SM00563	Phosphate acyltransferases
A6J82_RS08935	SM00487	DEAD-like helicases superfamily
A6J82_RS08935	SM00490	helicase superfamily c-terminal domain
A6J82_RS08950	SM00382	ATPases associated with a variety of cellular activities
A6J82_RS08995	SM00493	A6J82_RS08995
A6J82_RS09005	SM00855	Phosphoglycerate mutase family
A6J82_RS09070	SM00855	Phosphoglycerate mutase family
A6J82_RS09165	SM00731	SprT homologues.
A6J82_RS09170	SM00316	Ribosomal protein S1-like RNA-binding domain
A6J82_RS09170	SM00732	Likely ribonuclease with RNase H fold.
A6J82_RS09205	SM00382	ATPases associated with a variety of cellular activities
A6J82_RS09205	SM00962	SRP54-type protein, GTPase domain
A6J82_RS09205	SM00963	SRP54-type protein, helical bundle domain
A6J82_RS09235	SM00358	Double-stranded RNA binding motif
A6J82_RS09235	SM00535	Ribonuclease III family
A6J82_RS09245	SM00849	Metallo-beta-lactamase superfamily
A6J82_RS09250	SM00091	PAS domain
A6J82_RS09250	SM00387	Histidine kinase-like ATPases
A6J82_RS09250	SM00388	His Kinase A (phosphoacceptor) domain
A6J82_RS09255	SM00448	cheY-homologous receiver domain
A6J82_RS09255	SM00862	Transcriptional regulatory protein, C terminal
A6J82_RS09260	SM00382	ATPases associated with a variety of cellular activities
A6J82_RS09265	SM00062	Bacterial periplasmic substrate-binding proteins
A6J82_RS09290	SM00448	cheY-homologous receiver domain
A6J82_RS09290	SM00862	Transcriptional regulatory protein, C terminal
A6J82_RS09295	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
A6J82_RS09310	SM00642	Alpha-amylase domain
A6J82_RS09315	SM00354	helix_turn _helix lactose operon repressor
A6J82_RS09365	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A6J82_RS09365	SM00895	A6J82_RS09365
A6J82_RS09410	SM00382	ATPases associated with a variety of cellular activities
A6J82_RS09420	SM00892	DNA/RNA non-specific endonuclease
A6J82_RS09430	SM00382	ATPases associated with a variety of cellular activities
A6J82_RS09460	SM00825	Beta-ketoacyl synthase
A6J82_RS09480	SM00382	ATPases associated with a variety of cellular activities
A6J82_RS09495	SM00822	A6J82_RS09495
A6J82_RS09520	SM00382	ATPases associated with a variety of cellular activities
A6J82_RS09555	SM00857	Resolvase, N terminal domain
A6J82_RS09575	SM00382	ATPases associated with a variety of cellular activities
A6J82_RS09590	SM00382	ATPases associated with a variety of cellular activities
A6J82_RS09595	SM00382	ATPases associated with a variety of cellular activities
A6J82_RS09615	SM00487	DEAD-like helicases superfamily
A6J82_RS09615	SM00490	helicase superfamily c-terminal domain
A6J82_RS09640	SM00487	DEAD-like helicases superfamily
A6J82_RS09640	SM00490	helicase superfamily c-terminal domain
A6J82_RS09680	SM00382	ATPases associated with a variety of cellular activities
A6J82_RS09695	SM00347	helix_turn_helix multiple antibiotic resistance protein
A6J82_RS09705	SM00857	Resolvase, N terminal domain
A6J82_RS09710	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
A6J82_RS09710	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
A6J82_RS09710	SM00493	A6J82_RS09710
A6J82_RS09800	SM00892	DNA/RNA non-specific endonuclease
A6J82_RS09805	SM01192	A6J82_RS09805
A6J82_RS09805	SM01193	A6J82_RS09805
A6J82_RS09830	SM00387	Histidine kinase-like ATPases
A6J82_RS09830	SM00433	TopoisomeraseII
A6J82_RS09885	SM00448	cheY-homologous receiver domain
A6J82_RS09885	SM00862	Transcriptional regulatory protein, C terminal
A6J82_RS09895	SM00382	ATPases associated with a variety of cellular activities
A6J82_RS10080	SM00507	HNH nucleases
A6J82_RS10210	SM00530	Helix-turn-helix XRE-family like proteins 
A6J82_RS10240	SM00530	Helix-turn-helix XRE-family like proteins 
A6J82_RS10245	SM00954	Region found in RelA / SpoT proteins
A6J82_RS10275	SM00830	Chorismate mutase type II
A6J82_RS10360	SM00479	A6J82_RS10360
A6J82_RS10360	SM00491	A6J82_RS10360
A6J82_RS10385	SM00849	Metallo-beta-lactamase superfamily
A6J82_RS10400	SM00382	ATPases associated with a variety of cellular activities
A6J82_RS10405	SM00937	A6J82_RS10405
A6J82_RS10425	SM00831	Cation transporter/ATPase, N-terminus
A6J82_RS10435	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
A6J82_RS10475	SM00411	bacterial (prokaryotic) histone like domain
A6J82_RS10505	SM00363	S4 RNA-binding domain
A6J82_RS10540	SM00382	ATPases associated with a variety of cellular activities
A6J82_RS10555	SM00382	ATPases associated with a variety of cellular activities
A6J82_RS10555	SM01086	C-terminal, D2-small domain, of ClpB protein
A6J82_RS10580	SM00363	S4 RNA-binding domain
A6J82_RS10600	SM00864	Tubulin/FtsZ family, GTPase domain
A6J82_RS10600	SM00865	Tubulin/FtsZ family, C-terminal domain
A6J82_RS10605	SM00842	Cell division protein FtsA
A6J82_RS10630	SM00838	Elongation factor G C-terminus
A6J82_RS10635	SM00450	Rhodanese Homology Domain
A6J82_RS10655	SM00478	endonuclease III
A6J82_RS10675	SM00729	Elongator protein 3, MiaB family, Radical SAM
A6J82_RS10675	SM00876	Biotin and Thiamin Synthesis associated domain
A6J82_RS10695	SM00382	ATPases associated with a variety of cellular activities
A6J82_RS10700	SM00382	ATPases associated with a variety of cellular activities
A6J82_RS10825	SM00342	helix_turn_helix, arabinose operon control protein
A6J82_RS10850	SM00422	helix_turn_helix, mercury resistance
A6J82_RS10875	SM00871	Bacterial transcription activator, effector binding domain
A6J82_RS11000	SM00393	Putative single-stranded nucleic acids-binding domain
A6J82_RS11000	SM01245	A6J82_RS11000
A6J82_RS11065	SM00849	Metallo-beta-lactamase superfamily
A6J82_RS11090	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A6J82_RS11090	SM00387	Histidine kinase-like ATPases
A6J82_RS11090	SM00388	His Kinase A (phosphoacceptor) domain
A6J82_RS11095	SM00448	cheY-homologous receiver domain
A6J82_RS11095	SM00862	Transcriptional regulatory protein, C terminal
A6J82_RS11120	SM00881	CoA binding domain
A6J82_RS11125	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
A6J82_RS11125	SM00474	3'-5' exonuclease
A6J82_RS11125	SM00475	5'-3' exonuclease
A6J82_RS11125	SM00482	DNA polymerase A domain
A6J82_RS11180	SM00322	K homology RNA-binding domain
A6J82_RS11210	SM00382	ATPases associated with a variety of cellular activities
A6J82_RS11335	SM00878	Biotin carboxylase C-terminal domain
A6J82_RS11350	SM00825	Beta-ketoacyl synthase
A6J82_RS11355	SM00822	A6J82_RS11355
A6J82_RS11360	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
A6J82_RS11380	SM00347	helix_turn_helix multiple antibiotic resistance protein
