A9256_RS00005	SM00382	ATPases associated with a variety of cellular activities
A9256_RS00005	SM00760	Bacterial dnaA protein helix-turn-helix domain
A9256_RS00010	SM00480	DNA polymerase III beta subunit
A9256_RS00015	SM00046	Diacylglycerol kinase catalytic domain (presumed)
A9256_RS00035	SM00487	DEAD-like helicases superfamily
A9256_RS00035	SM00490	helicase superfamily c-terminal domain
A9256_RS00035	SM00982	A9256_RS00035
A9256_RS00035	SM01058	CarD-like/TRCF domain
A9256_RS00040	SM00363	S4 RNA-binding domain
A9256_RS00060	SM00977	TilS substrate C-terminal domain
A9256_RS00070	SM00382	ATPases associated with a variety of cellular activities
A9256_RS00185	SM01400	A9256_RS00185
A9256_RS00220	SM01211	A9256_RS00220
A9256_RS00245	SM00798	AICARFT/IMPCHase bienzyme
A9256_RS00245	SM00851	MGS-like domain
A9256_RS00255	SM00257	Lysin motif
A9256_RS00290	SM01130	A9256_RS00290
A9256_RS00310	SM01209	A9256_RS00310
A9256_RS00310	SM01210	A9256_RS00310
A9256_RS00315	SM01001	AIR carboxylase
A9256_RS00330	SM00998	Adenylosuccinate lyase C-terminus
A9256_RS00335	SM00530	Helix-turn-helix XRE-family like proteins 
A9256_RS00340	SM00382	ATPases associated with a variety of cellular activities
A9256_RS00345	SM00226	Low molecular weight phosphatase family
A9256_RS00350	SM00698	Possible plasma membrane-binding motif in junctophilins, PIP-5-kinases and protein kinases.
A9256_RS00365	SM00829	Enoylreductase
A9256_RS00380	SM01403	A9256_RS00380
A9256_RS00400	SM01382	A9256_RS00400
A9256_RS00400	SM01383	A9256_RS00400
A9256_RS00415	SM00322	K homology RNA-binding domain
A9256_RS00435	SM01374	A9256_RS00435
A9256_RS00440	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
A9256_RS00495	SM00316	Ribosomal protein S1-like RNA-binding domain
A9256_RS00510	SM00662	RNA polymerases D
A9256_RS00690	SM00490	helicase superfamily c-terminal domain
A9256_RS00705	SM00942	Primase C terminal 1 (PriCT-1)
A9256_RS00705	SM00943	Bifunctional DNA primase/polymerase, N-terminal
A9256_RS00710	SM00990	A9256_RS00710
A9256_RS00730	SM00507	HNH nucleases
A9256_RS00850	SM00047	Lysozyme subfamily 2
A9256_RS00875	SM00641	Glycosyl hydrolases family 25
A9256_RS00885	SM00530	Helix-turn-helix XRE-family like proteins 
A9256_RS00895	SM00855	Phosphoglycerate mutase family
A9256_RS00905	SM00047	Lysozyme subfamily 2
A9256_RS00925	SM00271	DnaJ molecular chaperone homology domain
A9256_RS00930	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A9256_RS00990	SM00382	ATPases associated with a variety of cellular activities
A9256_RS00995	SM00947	Carbonic anhydrase
A9256_RS01025	SM00382	ATPases associated with a variety of cellular activities
A9256_RS01040	SM00354	helix_turn _helix lactose operon repressor
A9256_RS01050	SM00382	ATPases associated with a variety of cellular activities
A9256_RS01055	SM00448	cheY-homologous receiver domain
A9256_RS01055	SM00862	Transcriptional regulatory protein, C terminal
A9256_RS01060	SM00387	Histidine kinase-like ATPases
A9256_RS01060	SM00388	His Kinase A (phosphoacceptor) domain
A9256_RS01095	SM01120	A9256_RS01095
A9256_RS01095	SM01121	A9256_RS01095
A9256_RS01100	SM00244	prohibitin homologues
A9256_RS01135	SM00382	ATPases associated with a variety of cellular activities
A9256_RS01140	SM00062	Bacterial periplasmic substrate-binding proteins
A9256_RS01165	SM00382	ATPases associated with a variety of cellular activities
A9256_RS01195	SM00936	Penicillin-binding protein 5, C-terminal domain 
A9256_RS01215	SM00382	ATPases associated with a variety of cellular activities
A9256_RS01220	SM00382	ATPases associated with a variety of cellular activities
A9256_RS01255	SM00347	helix_turn_helix multiple antibiotic resistance protein
A9256_RS01260	SM00382	ATPases associated with a variety of cellular activities
A9256_RS01270	SM00892	DNA/RNA non-specific endonuclease
A9256_RS01275	SM00363	S4 RNA-binding domain
A9256_RS01290	SM00663	RNA polymerase I subunit A N-terminus
A9256_RS01345	SM00530	Helix-turn-helix XRE-family like proteins 
A9256_RS01405	SM00387	Histidine kinase-like ATPases
A9256_RS01410	SM00448	cheY-homologous receiver domain
A9256_RS01410	SM00850	LytTr DNA-binding domain
A9256_RS01440	SM00382	ATPases associated with a variety of cellular activities
A9256_RS01445	SM00382	ATPases associated with a variety of cellular activities
A9256_RS01455	SM00642	Alpha-amylase domain
A9256_RS01480	SM00861	Transketolase, pyrimidine binding domain
A9256_RS01490	SM01387	A9256_RS01490
A9256_RS01495	SM00316	Ribosomal protein S1-like RNA-binding domain
A9256_RS01495	SM00322	K homology RNA-binding domain
A9256_RS01515	SM00840	A9256_RS01515
A9256_RS01525	SM00967	RNA 2'-O ribose methyltransferase substrate binding
A9256_RS01555	SM00530	Helix-turn-helix XRE-family like proteins 
A9256_RS01655	SM00530	Helix-turn-helix XRE-family like proteins 
A9256_RS01680	SM00116	Domain in cystathionine beta-synthase and other proteins.
A9256_RS01680	SM00382	ATPases associated with a variety of cellular activities
A9256_RS01810	SM00530	Helix-turn-helix XRE-family like proteins 
A9256_RS01855	SM00382	ATPases associated with a variety of cellular activities
A9256_RS01935	SM00861	Transketolase, pyrimidine binding domain
A9256_RS01945	SM00382	ATPases associated with a variety of cellular activities
A9256_RS01980	SM00740	A9256_RS01980
A9256_RS01990	SM00487	DEAD-like helicases superfamily
A9256_RS01990	SM00490	helicase superfamily c-terminal domain
A9256_RS01995	SM00062	Bacterial periplasmic substrate-binding proteins
A9256_RS02005	SM00382	ATPases associated with a variety of cellular activities
A9256_RS02060	SM00981	A9256_RS02060
A9256_RS02075	SM00322	K homology RNA-binding domain
A9256_RS02075	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
A9256_RS02080	SM00382	ATPases associated with a variety of cellular activities
A9256_RS02095	SM00421	helix_turn_helix, Lux Regulon
A9256_RS02095	SM00448	cheY-homologous receiver domain
A9256_RS02105	SM00072	Guanylate kinase homologues.
A9256_RS02110	SM01409	A9256_RS02110
A9256_RS02115	SM00487	DEAD-like helicases superfamily
A9256_RS02115	SM00490	helicase superfamily c-terminal domain
A9256_RS02130	SM00331	Sigma factor PP2C-like phosphatases
A9256_RS02130	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
A9256_RS02135	SM00220	Serine/Threonine protein kinases, catalytic domain
A9256_RS02135	SM00740	A9256_RS02135
A9256_RS02150	SM00421	helix_turn_helix, Lux Regulon
A9256_RS02150	SM00448	cheY-homologous receiver domain
A9256_RS02160	SM00316	Ribosomal protein S1-like RNA-binding domain
A9256_RS02170	SM00420	helix_turn_helix, Deoxyribose operon repressor
A9256_RS02170	SM01134	A9256_RS02170
A9256_RS02220	SM00487	DEAD-like helicases superfamily
A9256_RS02220	SM00490	helicase superfamily c-terminal domain
A9256_RS02275	SM00347	helix_turn_helix multiple antibiotic resistance protein
A9256_RS02295	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
A9256_RS02300	SM00822	A9256_RS02300
A9256_RS02305	SM00825	Beta-ketoacyl synthase
A9256_RS02320	SM00878	Biotin carboxylase C-terminal domain
A9256_RS02425	SM00382	ATPases associated with a variety of cellular activities
A9256_RS02455	SM00322	K homology RNA-binding domain
A9256_RS02510	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
A9256_RS02510	SM00474	3'-5' exonuclease
A9256_RS02510	SM00475	5'-3' exonuclease
A9256_RS02510	SM00482	DNA polymerase A domain
A9256_RS02515	SM00881	CoA binding domain
A9256_RS02530	SM00448	cheY-homologous receiver domain
A9256_RS02530	SM00862	Transcriptional regulatory protein, C terminal
A9256_RS02535	SM00387	Histidine kinase-like ATPases
A9256_RS02535	SM00388	His Kinase A (phosphoacceptor) domain
A9256_RS02560	SM00849	Metallo-beta-lactamase superfamily
A9256_RS02615	SM00393	Putative single-stranded nucleic acids-binding domain
A9256_RS02615	SM01245	A9256_RS02615
A9256_RS02720	SM00871	Bacterial transcription activator, effector binding domain
A9256_RS02735	SM00422	helix_turn_helix, mercury resistance
A9256_RS02760	SM00342	helix_turn_helix, arabinose operon control protein
A9256_RS02815	SM01007	Class II Aldolase and Adducin N-terminal domain
A9256_RS02835	SM00342	helix_turn_helix, arabinose operon control protein
A9256_RS02920	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
A9256_RS02920	SM00487	DEAD-like helicases superfamily
A9256_RS03020	SM00382	ATPases associated with a variety of cellular activities
A9256_RS03025	SM00382	ATPases associated with a variety of cellular activities
A9256_RS03040	SM00729	Elongator protein 3, MiaB family, Radical SAM
A9256_RS03040	SM00876	Biotin and Thiamin Synthesis associated domain
A9256_RS03060	SM00478	endonuclease III
A9256_RS03080	SM00450	Rhodanese Homology Domain
A9256_RS03085	SM00838	Elongation factor G C-terminus
A9256_RS03110	SM00842	Cell division protein FtsA
A9256_RS03115	SM00864	Tubulin/FtsZ family, GTPase domain
A9256_RS03115	SM00865	Tubulin/FtsZ family, C-terminal domain
A9256_RS03135	SM00363	S4 RNA-binding domain
A9256_RS03160	SM00382	ATPases associated with a variety of cellular activities
A9256_RS03160	SM01086	C-terminal, D2-small domain, of ClpB protein
A9256_RS03175	SM00382	ATPases associated with a variety of cellular activities
A9256_RS03210	SM00363	S4 RNA-binding domain
A9256_RS03240	SM00411	bacterial (prokaryotic) histone like domain
A9256_RS03275	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
A9256_RS03285	SM00831	Cation transporter/ATPase, N-terminus
A9256_RS03305	SM00937	A9256_RS03305
A9256_RS03310	SM00382	ATPases associated with a variety of cellular activities
A9256_RS03325	SM00849	Metallo-beta-lactamase superfamily
A9256_RS03335	SM00479	A9256_RS03335
A9256_RS03335	SM00491	A9256_RS03335
A9256_RS03410	SM00830	Chorismate mutase type II
A9256_RS03455	SM00382	ATPases associated with a variety of cellular activities
A9256_RS03465	SM00448	cheY-homologous receiver domain
A9256_RS03465	SM00862	Transcriptional regulatory protein, C terminal
A9256_RS03495	SM00387	Histidine kinase-like ATPases
A9256_RS03495	SM00433	TopoisomeraseII
A9256_RS03520	SM01192	A9256_RS03520
A9256_RS03520	SM01193	A9256_RS03520
A9256_RS03525	SM00892	DNA/RNA non-specific endonuclease
A9256_RS03595	SM00342	helix_turn_helix, arabinose operon control protein
A9256_RS03625	SM00327	von Willebrand factor (vWF) type A domain
A9256_RS03660	SM00382	ATPases associated with a variety of cellular activities
A9256_RS03685	SM00822	A9256_RS03685
A9256_RS03700	SM00382	ATPases associated with a variety of cellular activities
A9256_RS03720	SM00825	Beta-ketoacyl synthase
A9256_RS03805	SM00382	ATPases associated with a variety of cellular activities
A9256_RS03815	SM00892	DNA/RNA non-specific endonuclease
A9256_RS03825	SM00382	ATPases associated with a variety of cellular activities
A9256_RS03870	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A9256_RS03870	SM00895	A9256_RS03870
A9256_RS03910	SM00354	helix_turn _helix lactose operon repressor
A9256_RS03915	SM00642	Alpha-amylase domain
A9256_RS03930	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
A9256_RS03935	SM00448	cheY-homologous receiver domain
A9256_RS03935	SM00862	Transcriptional regulatory protein, C terminal
A9256_RS03960	SM00062	Bacterial periplasmic substrate-binding proteins
A9256_RS03965	SM00382	ATPases associated with a variety of cellular activities
A9256_RS03970	SM00448	cheY-homologous receiver domain
A9256_RS03970	SM00862	Transcriptional regulatory protein, C terminal
A9256_RS03975	SM00091	PAS domain
A9256_RS03975	SM00387	Histidine kinase-like ATPases
A9256_RS03975	SM00388	His Kinase A (phosphoacceptor) domain
A9256_RS03980	SM00849	Metallo-beta-lactamase superfamily
A9256_RS03990	SM00358	Double-stranded RNA binding motif
A9256_RS03990	SM00535	Ribonuclease III family
A9256_RS03995	SM00968	SMC proteins Flexible Hinge Domain
A9256_RS04010	SM00382	ATPases associated with a variety of cellular activities
A9256_RS04010	SM00962	SRP54-type protein, GTPase domain
A9256_RS04010	SM00963	SRP54-type protein, helical bundle domain
A9256_RS04035	SM00316	Ribosomal protein S1-like RNA-binding domain
A9256_RS04035	SM00732	Likely ribonuclease with RNase H fold.
A9256_RS04040	SM00731	SprT homologues.
A9256_RS04130	SM00855	Phosphoglycerate mutase family
A9256_RS04185	SM00855	Phosphoglycerate mutase family
A9256_RS04195	SM00493	A9256_RS04195
A9256_RS04250	SM00487	DEAD-like helicases superfamily
A9256_RS04250	SM00490	helicase superfamily c-terminal domain
A9256_RS04265	SM00563	Phosphate acyltransferases
A9256_RS04270	SM00278	Helix-hairpin-helix DNA-binding motif class 1
A9256_RS04275	SM00849	Metallo-beta-lactamase superfamily
A9256_RS04285	SM00354	helix_turn _helix lactose operon repressor
A9256_RS04310	SM01061	CAT RNA binding domain
A9256_RS04370	SM00363	S4 RNA-binding domain
A9256_RS04410	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
A9256_RS04435	SM00530	Helix-turn-helix XRE-family like proteins 
A9256_RS04485	SM00487	DEAD-like helicases superfamily
A9256_RS04485	SM00490	helicase superfamily c-terminal domain
A9256_RS04500	SM00382	ATPases associated with a variety of cellular activities
A9256_RS04545	SM00382	ATPases associated with a variety of cellular activities
A9256_RS04585	SM00116	Domain in cystathionine beta-synthase and other proteins.
A9256_RS04610	SM00278	Helix-hairpin-helix DNA-binding motif class 1
A9256_RS04610	SM00292	breast cancer carboxy-terminal domain
A9256_RS04610	SM00532	Ligase N family
A9256_RS04615	SM00046	Diacylglycerol kinase catalytic domain (presumed)
A9256_RS04620	SM00642	Alpha-amylase domain
A9256_RS04625	SM00642	Alpha-amylase domain
A9256_RS04675	SM00382	ATPases associated with a variety of cellular activities
A9256_RS04700	SM00892	DNA/RNA non-specific endonuclease
A9256_RS04715	SM00873	B3/4 domain
A9256_RS04715	SM00874	tRNA synthetase B5 domain
A9256_RS04715	SM00896	Ferredoxin-fold anticodon binding domain
A9256_RS04745	SM00382	ATPases associated with a variety of cellular activities
A9256_RS04755	SM00861	Transketolase, pyrimidine binding domain
A9256_RS04810	SM00729	Elongator protein 3, MiaB family, Radical SAM
A9256_RS04855	SM00562	A9256_RS04855
A9256_RS04860	SM00838	Elongation factor G C-terminus
A9256_RS04865	SM00365	Leucine-rich repeat, SDS22-like subfamily
A9256_RS04865	SM00369	Leucine-rich repeats, typical (most populated) subfamily
A9256_RS04870	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
A9256_RS04885	SM00831	Cation transporter/ATPase, N-terminus
A9256_RS04915	SM00382	ATPases associated with a variety of cellular activities
A9256_RS04920	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A9256_RS04925	SM00481	DNA polymerase alpha chain like domain
A9256_RS04960	SM00382	ATPases associated with a variety of cellular activities
A9256_RS04965	SM00062	Bacterial periplasmic substrate-binding proteins
A9256_RS04995	SM00382	ATPases associated with a variety of cellular activities
A9256_RS05020	SM00434	DNA Topoisomerase IV
A9256_RS05060	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A9256_RS05060	SM00866	A9256_RS05060
A9256_RS05085	SM00245	tail specific protease
A9256_RS05090	SM00382	ATPases associated with a variety of cellular activities
A9256_RS05100	SM00448	cheY-homologous receiver domain
A9256_RS05100	SM00862	Transcriptional regulatory protein, C terminal
A9256_RS05105	SM00387	Histidine kinase-like ATPases
A9256_RS05130	SM00382	ATPases associated with a variety of cellular activities
A9256_RS05130	SM00962	SRP54-type protein, GTPase domain
A9256_RS05130	SM00963	SRP54-type protein, helical bundle domain
A9256_RS05140	SM00387	Histidine kinase-like ATPases
A9256_RS05140	SM00388	His Kinase A (phosphoacceptor) domain
A9256_RS05145	SM00448	cheY-homologous receiver domain
A9256_RS05145	SM00862	Transcriptional regulatory protein, C terminal
A9256_RS05160	SM00382	ATPases associated with a variety of cellular activities
A9256_RS05165	SM00382	ATPases associated with a variety of cellular activities
A9256_RS05205	SM00904	Riboflavin kinase
A9256_RS05240	SM00382	ATPases associated with a variety of cellular activities
A9256_RS05245	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
A9256_RS05245	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
A9256_RS05245	SM00493	A9256_RS05245
A9256_RS05260	SM00382	ATPases associated with a variety of cellular activities
A9256_RS05275	SM01266	A9256_RS05275
A9256_RS05300	SM00448	cheY-homologous receiver domain
A9256_RS05300	SM00850	LytTr DNA-binding domain
A9256_RS05305	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
A9256_RS05405	SM00851	MGS-like domain
A9256_RS05405	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
A9256_RS05405	SM01209	A9256_RS05405
A9256_RS05410	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
A9256_RS05430	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
A9256_RS05440	SM00382	ATPases associated with a variety of cellular activities
A9256_RS05460	SM00155	Phospholipase D. Active site motifs.
A9256_RS05480	SM00506	Appr-1"-p processing enzyme
A9256_RS05530	SM00382	ATPases associated with a variety of cellular activities
A9256_RS05535	SM00382	ATPases associated with a variety of cellular activities
A9256_RS05565	SM00937	A9256_RS05565
A9256_RS05610	SM01240	A9256_RS05610
A9256_RS05650	SM00954	Region found in RelA / SpoT proteins
A9256_RS05655	SM01118	A9256_RS05655
A9256_RS05660	SM01400	A9256_RS05660
A9256_RS05675	SM00881	CoA binding domain
A9256_RS05705	SM00342	helix_turn_helix, arabinose operon control protein
A9256_RS05730	SM00382	ATPases associated with a variety of cellular activities
A9256_RS05745	SM00905	Dihydroneopterin aldolase
A9256_RS05830	SM00530	Helix-turn-helix XRE-family like proteins 
A9256_RS05855	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A9256_RS05940	SM00316	Ribosomal protein S1-like RNA-binding domain
A9256_RS05965	SM00434	DNA Topoisomerase IV
A9256_RS05970	SM00387	Histidine kinase-like ATPases
A9256_RS05970	SM00433	TopoisomeraseII
A9256_RS05975	SM01207	A9256_RS05975
A9256_RS05990	SM00986	Uracil DNA glycosylase superfamily
A9256_RS05990	SM00987	UreE urease accessory protein, C-terminal domain 
A9256_RS06015	SM00858	A9256_RS06015
A9256_RS06130	SM00849	Metallo-beta-lactamase superfamily
A9256_RS06135	SM00382	ATPases associated with a variety of cellular activities
A9256_RS06165	SM00028	Tetratricopeptide repeats
A9256_RS06230	SM00728	Clostridial hydrophobic, with a conserved W residue, domain.
A9256_RS06275	SM00642	Alpha-amylase domain
A9256_RS06285	SM00986	Uracil DNA glycosylase superfamily
A9256_RS06285	SM00987	UreE urease accessory protein, C-terminal domain 
A9256_RS06305	SM00465	GIY-YIG type nucleases (URI domain)
A9256_RS06385	SM00479	A9256_RS06385
A9256_RS06385	SM00497	Intron encoded nuclease repeat motif
A9256_RS06460	SM00382	ATPases associated with a variety of cellular activities
A9256_RS06460	SM01086	C-terminal, D2-small domain, of ClpB protein
A9256_RS06495	SM00382	ATPases associated with a variety of cellular activities
A9256_RS06495	SM00994	ClpX C4-type zinc finger
A9256_RS06495	SM01086	C-terminal, D2-small domain, of ClpB protein
A9256_RS06535	SM00046	Diacylglycerol kinase catalytic domain (presumed)
A9256_RS06570	SM00387	Histidine kinase-like ATPases
A9256_RS06570	SM00388	His Kinase A (phosphoacceptor) domain
A9256_RS06575	SM00448	cheY-homologous receiver domain
A9256_RS06575	SM00862	Transcriptional regulatory protein, C terminal
A9256_RS06580	SM00954	Region found in RelA / SpoT proteins
A9256_RS06585	SM00382	ATPases associated with a variety of cellular activities
A9256_RS06590	SM00382	ATPases associated with a variety of cellular activities
A9256_RS06595	SM00347	helix_turn_helix multiple antibiotic resistance protein
A9256_RS06610	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
A9256_RS06620	SM00382	ATPases associated with a variety of cellular activities
A9256_RS06625	SM00382	ATPases associated with a variety of cellular activities
A9256_RS06635	SM00382	ATPases associated with a variety of cellular activities
A9256_RS06675	SM00420	helix_turn_helix, Deoxyribose operon repressor
A9256_RS06675	SM01134	A9256_RS06675
A9256_RS06685	SM00287	Bacterial SH3 domain homologues
A9256_RS06745	SM00382	ATPases associated with a variety of cellular activities
A9256_RS06755	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
A9256_RS06760	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
A9256_RS06770	SM00363	S4 RNA-binding domain
A9256_RS06800	SM00854	Bacterial capsule synthesis protein PGA_cap
A9256_RS06805	SM00981	A9256_RS06805
A9256_RS06875	SM00257	Lysin motif
A9256_RS06905	SM00382	ATPases associated with a variety of cellular activities
A9256_RS06930	SM01131	A9256_RS06930
A9256_RS06940	SM01091	Transporter associated domain
A9256_RS06950	SM00729	Elongator protein 3, MiaB family, Radical SAM
A9256_RS06955	SM00014	Acid phosphatase homologues
A9256_RS07080	SM00400	zinc finger
A9256_RS07080	SM00493	A9256_RS07080
A9256_RS07100	SM00062	Bacterial periplasmic substrate-binding proteins
A9256_RS07100	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
A9256_RS07115	SM00450	Rhodanese Homology Domain
A9256_RS07140	SM00354	helix_turn _helix lactose operon repressor
A9256_RS07185	SM00957	SecA DEAD-like domain
A9256_RS07185	SM00958	SecA preprotein cross-linking domain
A9256_RS07250	SM00487	DEAD-like helicases superfamily
A9256_RS07250	SM00490	helicase superfamily c-terminal domain
A9256_RS07260	SM00062	Bacterial periplasmic substrate-binding proteins
A9256_RS07260	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
A9256_RS07265	SM00382	ATPases associated with a variety of cellular activities
A9256_RS07305	SM00363	S4 RNA-binding domain
A9256_RS07340	SM00316	Ribosomal protein S1-like RNA-binding domain
A9256_RS07340	SM00955	A9256_RS07340
A9256_RS07360	SM00382	ATPases associated with a variety of cellular activities
A9256_RS07370	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
A9256_RS07370	SM01232	A9256_RS07370
A9256_RS07375	SM00530	Helix-turn-helix XRE-family like proteins 
A9256_RS07380	SM00460	Transglutaminase/protease-like homologues
A9256_RS07475	SM00382	ATPases associated with a variety of cellular activities
A9256_RS07480	SM00382	ATPases associated with a variety of cellular activities
A9256_RS07505	SM00649	Ribosomal protein L11/L12
A9256_RS07535	SM00382	ATPases associated with a variety of cellular activities
A9256_RS07535	SM00843	A9256_RS07535
A9256_RS07550	SM00382	ATPases associated with a variety of cellular activities
A9256_RS07560	SM00529	Helix-turn-helix diphteria tox regulatory element
A9256_RS07560	SM00899	A9256_RS07560
A9256_RS07600	SM01022	A9256_RS07600
A9256_RS07745	SM00116	Domain in cystathionine beta-synthase and other proteins.
A9256_RS07750	SM00382	ATPases associated with a variety of cellular activities
A9256_RS07755	SM00382	ATPases associated with a variety of cellular activities
A9256_RS07815	SM01234	A9256_RS07815
A9256_RS07820	SM00363	S4 RNA-binding domain
A9256_RS07885	SM00967	RNA 2'-O ribose methyltransferase substrate binding
A9256_RS07905	SM00062	Bacterial periplasmic substrate-binding proteins
A9256_RS07940	SM00487	DEAD-like helicases superfamily
A9256_RS07940	SM00490	helicase superfamily c-terminal domain
A9256_RS07965	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A9256_RS07965	SM00387	Histidine kinase-like ATPases
A9256_RS07965	SM00388	His Kinase A (phosphoacceptor) domain
A9256_RS07970	SM00448	cheY-homologous receiver domain
A9256_RS07970	SM00862	Transcriptional regulatory protein, C terminal
A9256_RS08010	SM00382	ATPases associated with a variety of cellular activities
A9256_RS08030	SM00829	Enoylreductase
A9256_RS08040	SM00382	ATPases associated with a variety of cellular activities
A9256_RS08040	SM00930	A9256_RS08040
A9256_RS08055	SM00062	Bacterial periplasmic substrate-binding proteins
A9256_RS08085	SM01120	A9256_RS08085
A9256_RS08105	SM00422	helix_turn_helix, mercury resistance
A9256_RS08135	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
A9256_RS08145	SM01103	A9256_RS08145
A9256_RS08165	SM00845	GatB domain
A9256_RS08190	SM00116	Domain in cystathionine beta-synthase and other proteins.
A9256_RS08240	SM00487	DEAD-like helicases superfamily
A9256_RS08240	SM00490	helicase superfamily c-terminal domain
A9256_RS08250	SM01005	Alanine racemase, C-terminal domain
A9256_RS08265	SM00957	SecA DEAD-like domain
A9256_RS08265	SM00958	SecA preprotein cross-linking domain
A9256_RS08285	SM00640	Glycosyl hydrolases family 32
A9256_RS08290	SM00354	helix_turn _helix lactose operon repressor
A9256_RS08305	SM00841	Elongation factor P, C-terminal
A9256_RS08305	SM01185	A9256_RS08305
A9256_RS08345	SM00382	ATPases associated with a variety of cellular activities
A9256_RS08375	SM00478	endonuclease III
A9256_RS08380	SM00530	Helix-turn-helix XRE-family like proteins 
A9256_RS08390	SM00014	Acid phosphatase homologues
A9256_RS08395	SM00463	Small MutS-related domain
A9256_RS08395	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
A9256_RS08395	SM00534	ATPase domain of DNA mismatch repair MUTS family
A9256_RS08420	SM00382	ATPases associated with a variety of cellular activities
A9256_RS08475	SM00419	helix_turn_helix, cAMP Regulatory protein
A9256_RS08480	SM00939	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
A9256_RS08480	SM00940	X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal
A9256_RS08495	SM00382	ATPases associated with a variety of cellular activities
A9256_RS08500	SM00382	ATPases associated with a variety of cellular activities
A9256_RS08540	SM00861	Transketolase, pyrimidine binding domain
A9256_RS08615	SM00530	Helix-turn-helix XRE-family like proteins 
A9256_RS08655	SM00889	Elongation factor G, domain IV
A9256_RS08660	SM00530	Helix-turn-helix XRE-family like proteins 
A9256_RS08715	SM00422	helix_turn_helix, mercury resistance
A9256_RS08720	SM00479	A9256_RS08720
A9256_RS08770	SM00849	Metallo-beta-lactamase superfamily
A9256_RS08780	SM01230	A9256_RS08780
A9256_RS08785	SM00422	helix_turn_helix, mercury resistance
A9256_RS08805	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
A9256_RS08810	SM00838	Elongation factor G C-terminus
A9256_RS08810	SM00889	Elongation factor G, domain IV
A9256_RS08840	SM00983	Thiamin pyrophosphokinase, vitamin B1 binding domain
A9256_RS08860	SM00650	Ribosomal RNA adenine dimethylases
A9256_RS08870	SM00493	A9256_RS08870
A9256_RS08925	SM00387	Histidine kinase-like ATPases
A9256_RS08925	SM00388	His Kinase A (phosphoacceptor) domain
A9256_RS08930	SM00448	cheY-homologous receiver domain
A9256_RS08930	SM00862	Transcriptional regulatory protein, C terminal
A9256_RS08950	SM00382	ATPases associated with a variety of cellular activities
A9256_RS09000	SM00354	helix_turn _helix lactose operon repressor
A9256_RS09010	SM01007	Class II Aldolase and Adducin N-terminal domain
A9256_RS09020	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
A9256_RS09050	SM00788	Adenylosuccinate synthetase
A9256_RS09100	SM00382	ATPases associated with a variety of cellular activities
A9256_RS09100	SM01086	C-terminal, D2-small domain, of ClpB protein
A9256_RS09170	SM00100	Cyclic nucleotide-monophosphate binding domain
A9256_RS09180	SM00354	helix_turn _helix lactose operon repressor
A9256_RS09200	SM00347	helix_turn_helix multiple antibiotic resistance protein
A9256_RS09205	SM00479	A9256_RS09205
A9256_RS09205	SM00481	DNA polymerase alpha chain like domain
A9256_RS09210	SM00047	Lysozyme subfamily 2
A9256_RS09235	SM01323	A9256_RS09235
A9256_RS09245	SM00919	Malic enzyme, NAD binding domain
A9256_RS09245	SM01274	A9256_RS09245
A9256_RS09260	SM00448	cheY-homologous receiver domain
A9256_RS09270	SM00642	Alpha-amylase domain
A9256_RS09275	SM00382	ATPases associated with a variety of cellular activities
A9256_RS09290	SM01133	A9256_RS09290
A9256_RS09335	SM00420	helix_turn_helix, Deoxyribose operon repressor
A9256_RS09335	SM01134	A9256_RS09335
A9256_RS09355	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
A9256_RS09355	SM00954	Region found in RelA / SpoT proteins
A9256_RS09390	SM00342	helix_turn_helix, arabinose operon control protein
A9256_RS09390	SM00448	cheY-homologous receiver domain
A9256_RS09470	SM00387	Histidine kinase-like ATPases
A9256_RS09470	SM00388	His Kinase A (phosphoacceptor) domain
A9256_RS09475	SM00448	cheY-homologous receiver domain
A9256_RS09475	SM00862	Transcriptional regulatory protein, C terminal
A9256_RS09485	SM00382	ATPases associated with a variety of cellular activities
A9256_RS09525	SM00422	helix_turn_helix, mercury resistance
A9256_RS09555	SM00382	ATPases associated with a variety of cellular activities
A9256_RS09565	SM00901	A9256_RS09565
A9256_RS09600	SM00530	Helix-turn-helix XRE-family like proteins 
A9256_RS09720	SM00382	ATPases associated with a variety of cellular activities
A9256_RS09730	SM00530	Helix-turn-helix XRE-family like proteins 
A9256_RS09735	SM00014	Acid phosphatase homologues
A9256_RS09755	SM00450	Rhodanese Homology Domain
A9256_RS09810	SM00387	Histidine kinase-like ATPases
A9256_RS09810	SM00388	His Kinase A (phosphoacceptor) domain
A9256_RS09850	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
A9256_RS09850	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
A9256_RS09890	SM01133	A9256_RS09890
A9256_RS09905	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A9256_RS09920	SM00883	Chaperonin 10 Kd subunit
A9256_RS09925	SM00382	ATPases associated with a variety of cellular activities
A9256_RS09995	SM00732	Likely ribonuclease with RNase H fold.
A9256_RS10010	SM00382	ATPases associated with a variety of cellular activities
A9256_RS10015	SM00852	Probable molybdopterin binding domain
A9256_RS10025	SM00278	Helix-hairpin-helix DNA-binding motif class 1
A9256_RS10035	SM00853	MutL C terminal dimerisation domain
A9256_RS10035	SM01340	A9256_RS10035
A9256_RS10040	SM00357	Cold shock protein domain
A9256_RS10045	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
A9256_RS10045	SM00534	ATPase domain of DNA mismatch repair MUTS family
A9256_RS10055	SM00836	DALR anticodon binding domain
A9256_RS10055	SM01016	Arginyl tRNA synthetase N terminal dom
A9256_RS10105	SM00530	Helix-turn-helix XRE-family like proteins 
A9256_RS10155	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
A9256_RS10220	SM00448	cheY-homologous receiver domain
A9256_RS10220	SM00862	Transcriptional regulatory protein, C terminal
A9256_RS10225	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A9256_RS10225	SM00387	Histidine kinase-like ATPases
A9256_RS10225	SM00388	His Kinase A (phosphoacceptor) domain
A9256_RS10245	SM00387	Histidine kinase-like ATPases
A9256_RS10250	SM00448	cheY-homologous receiver domain
A9256_RS10255	SM00382	ATPases associated with a variety of cellular activities
A9256_RS10325	SM00885	D5 N terminal like
A9256_RS10330	SM00942	Primase C terminal 1 (PriCT-1)
A9256_RS10365	SM01040	BRO family, N-terminal domain
A9256_RS10375	SM00530	Helix-turn-helix XRE-family like proteins 
A9256_RS10405	SM00363	S4 RNA-binding domain
A9256_RS10405	SM01390	A9256_RS10405
A9256_RS10430	SM01228	A9256_RS10430
A9256_RS10460	SM00257	Lysin motif
A9256_RS10470	SM00382	ATPases associated with a variety of cellular activities
A9256_RS10475	SM00382	ATPases associated with a variety of cellular activities
A9256_RS10510	SM00530	Helix-turn-helix XRE-family like proteins 
A9256_RS10515	SM00116	Domain in cystathionine beta-synthase and other proteins.
A9256_RS10515	SM01240	A9256_RS10515
A9256_RS10525	SM00419	helix_turn_helix, cAMP Regulatory protein
A9256_RS10530	SM00873	B3/4 domain
A9256_RS10575	SM00382	ATPases associated with a variety of cellular activities
A9256_RS10605	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
A9256_RS10610	SM00470	ParB-like nuclease domain
