DK41_RS00005 SM00382 ATPases associated with a variety of cellular activities DK41_RS00005 SM00760 Bacterial dnaA protein helix-turn-helix domain DK41_RS00010 SM00480 DNA polymerase III beta subunit DK41_RS00045 SM00487 DEAD-like helicases superfamily DK41_RS00045 SM00490 helicase superfamily c-terminal domain DK41_RS00045 SM00982 DK41_RS00045 DK41_RS00045 SM01058 CarD-like/TRCF domain DK41_RS00050 SM00363 S4 RNA-binding domain DK41_RS00070 SM00977 TilS substrate C-terminal domain DK41_RS00080 SM00382 ATPases associated with a variety of cellular activities DK41_RS00260 SM01400 DK41_RS00260 DK41_RS00300 SM01211 DK41_RS00300 DK41_RS00330 SM00798 AICARFT/IMPCHase bienzyme DK41_RS00330 SM00851 MGS-like domain DK41_RS00340 SM00257 Lysin motif DK41_RS00375 SM01130 DK41_RS00375 DK41_RS00395 SM01209 DK41_RS00395 DK41_RS00395 SM01210 DK41_RS00395 DK41_RS00400 SM01001 AIR carboxylase DK41_RS00430 SM00998 Adenylosuccinate lyase C-terminus DK41_RS00435 SM00530 Helix-turn-helix XRE-family like proteins DK41_RS00440 SM00382 ATPases associated with a variety of cellular activities DK41_RS00445 SM00226 Low molecular weight phosphatase family DK41_RS00450 SM00698 Possible plasma membrane-binding motif in junctophilins, PIP-5-kinases and protein kinases. DK41_RS00465 SM00829 Enoylreductase DK41_RS00480 SM01403 DK41_RS00480 DK41_RS00500 SM01382 DK41_RS00500 DK41_RS00500 SM01383 DK41_RS00500 DK41_RS00515 SM00322 K homology RNA-binding domain DK41_RS00535 SM01374 DK41_RS00535 DK41_RS00540 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. DK41_RS00595 SM00316 Ribosomal protein S1-like RNA-binding domain DK41_RS00610 SM00662 RNA polymerases D DK41_RS00745 SM00855 Phosphoglycerate mutase family DK41_RS00755 SM00047 Lysozyme subfamily 2 DK41_RS00775 SM00271 DnaJ molecular chaperone homology domain DK41_RS00780 SM00345 helix_turn_helix gluconate operon transcriptional repressor DK41_RS00840 SM00382 ATPases associated with a variety of cellular activities DK41_RS00845 SM00947 Carbonic anhydrase DK41_RS00870 SM00382 ATPases associated with a variety of cellular activities DK41_RS00885 SM00354 helix_turn _helix lactose operon repressor DK41_RS00895 SM00382 ATPases associated with a variety of cellular activities DK41_RS00900 SM00448 cheY-homologous receiver domain DK41_RS00900 SM00862 Transcriptional regulatory protein, C terminal DK41_RS00905 SM00387 Histidine kinase-like ATPases DK41_RS00905 SM00388 His Kinase A (phosphoacceptor) domain DK41_RS00940 SM01120 DK41_RS00940 DK41_RS00940 SM01121 DK41_RS00940 DK41_RS00945 SM00244 prohibitin homologues DK41_RS00965 SM00382 ATPases associated with a variety of cellular activities DK41_RS00970 SM00062 Bacterial periplasmic substrate-binding proteins DK41_RS01005 SM00382 ATPases associated with a variety of cellular activities DK41_RS01035 SM00936 Penicillin-binding protein 5, C-terminal domain DK41_RS01055 SM00382 ATPases associated with a variety of cellular activities DK41_RS01060 SM00382 ATPases associated with a variety of cellular activities DK41_RS01095 SM00347 helix_turn_helix multiple antibiotic resistance protein DK41_RS01100 SM00382 ATPases associated with a variety of cellular activities DK41_RS01110 SM00892 DNA/RNA non-specific endonuclease DK41_RS01115 SM00363 S4 RNA-binding domain DK41_RS01130 SM00663 RNA polymerase I subunit A N-terminus DK41_RS01235 SM00387 Histidine kinase-like ATPases DK41_RS01240 SM00448 cheY-homologous receiver domain DK41_RS01240 SM00850 LytTr DNA-binding domain DK41_RS01270 SM00382 ATPases associated with a variety of cellular activities DK41_RS01275 SM00382 ATPases associated with a variety of cellular activities DK41_RS01285 SM00642 Alpha-amylase domain DK41_RS01310 SM00861 Transketolase, pyrimidine binding domain DK41_RS01320 SM01387 DK41_RS01320 DK41_RS01325 SM00316 Ribosomal protein S1-like RNA-binding domain DK41_RS01325 SM00322 K homology RNA-binding domain DK41_RS01345 SM00840 DK41_RS01345 DK41_RS01360 SM00967 RNA 2'-O ribose methyltransferase substrate binding DK41_RS01395 SM00530 Helix-turn-helix XRE-family like proteins DK41_RS01495 SM00530 Helix-turn-helix XRE-family like proteins DK41_RS01520 SM00116 Domain in cystathionine beta-synthase and other proteins. DK41_RS01520 SM00382 ATPases associated with a variety of cellular activities DK41_RS01645 SM00382 ATPases associated with a variety of cellular activities DK41_RS01725 SM00861 Transketolase, pyrimidine binding domain DK41_RS01735 SM00382 ATPases associated with a variety of cellular activities DK41_RS01770 SM00740 DK41_RS01770 DK41_RS01780 SM00487 DEAD-like helicases superfamily DK41_RS01780 SM00490 helicase superfamily c-terminal domain DK41_RS01785 SM00062 Bacterial periplasmic substrate-binding proteins DK41_RS01795 SM00382 ATPases associated with a variety of cellular activities DK41_RS01850 SM00981 DK41_RS01850 DK41_RS01865 SM00322 K homology RNA-binding domain DK41_RS01865 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. DK41_RS01870 SM00382 ATPases associated with a variety of cellular activities DK41_RS01885 SM00421 helix_turn_helix, Lux Regulon DK41_RS01885 SM00448 cheY-homologous receiver domain DK41_RS01895 SM00072 Guanylate kinase homologues. DK41_RS01900 SM01409 DK41_RS01900 DK41_RS01905 SM00487 DEAD-like helicases superfamily DK41_RS01905 SM00490 helicase superfamily c-terminal domain DK41_RS01920 SM00331 Sigma factor PP2C-like phosphatases DK41_RS01920 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain DK41_RS01925 SM00220 Serine/Threonine protein kinases, catalytic domain DK41_RS01925 SM00740 DK41_RS01925 DK41_RS01940 SM00421 helix_turn_helix, Lux Regulon DK41_RS01940 SM00448 cheY-homologous receiver domain DK41_RS01950 SM00316 Ribosomal protein S1-like RNA-binding domain DK41_RS01960 SM00420 helix_turn_helix, Deoxyribose operon repressor DK41_RS01960 SM01134 DK41_RS01960 DK41_RS02010 SM00487 DEAD-like helicases superfamily DK41_RS02010 SM00490 helicase superfamily c-terminal domain DK41_RS02065 SM00347 helix_turn_helix multiple antibiotic resistance protein DK41_RS02085 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. DK41_RS02090 SM00822 DK41_RS02090 DK41_RS02095 SM00825 Beta-ketoacyl synthase DK41_RS02110 SM00878 Biotin carboxylase C-terminal domain DK41_RS02225 SM00382 ATPases associated with a variety of cellular activities DK41_RS02255 SM00322 K homology RNA-binding domain DK41_RS02310 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs DK41_RS02310 SM00474 3'-5' exonuclease DK41_RS02310 SM00475 5'-3' exonuclease DK41_RS02310 SM00482 DNA polymerase A domain DK41_RS02315 SM00881 CoA binding domain DK41_RS02335 SM00448 cheY-homologous receiver domain DK41_RS02335 SM00862 Transcriptional regulatory protein, C terminal DK41_RS02340 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DK41_RS02340 SM00387 Histidine kinase-like ATPases DK41_RS02340 SM00388 His Kinase A (phosphoacceptor) domain DK41_RS02365 SM00849 Metallo-beta-lactamase superfamily DK41_RS02425 SM00393 Putative single-stranded nucleic acids-binding domain DK41_RS02425 SM01245 DK41_RS02425 DK41_RS02555 SM00871 Bacterial transcription activator, effector binding domain DK41_RS02570 SM00422 helix_turn_helix, mercury resistance DK41_RS02595 SM00342 helix_turn_helix, arabinose operon control protein DK41_RS02715 SM00382 ATPases associated with a variety of cellular activities DK41_RS02720 SM00382 ATPases associated with a variety of cellular activities DK41_RS02735 SM00729 Elongator protein 3, MiaB family, Radical SAM DK41_RS02735 SM00876 Biotin and Thiamin Synthesis associated domain DK41_RS02755 SM00478 endonuclease III DK41_RS02775 SM00450 Rhodanese Homology Domain DK41_RS02780 SM00838 Elongation factor G C-terminus DK41_RS02805 SM00842 Cell division protein FtsA DK41_RS02810 SM00864 Tubulin/FtsZ family, GTPase domain DK41_RS02810 SM00865 Tubulin/FtsZ family, C-terminal domain DK41_RS02830 SM00363 S4 RNA-binding domain DK41_RS02855 SM00382 ATPases associated with a variety of cellular activities DK41_RS02855 SM01086 C-terminal, D2-small domain, of ClpB protein DK41_RS02870 SM00382 ATPases associated with a variety of cellular activities DK41_RS02905 SM00363 S4 RNA-binding domain DK41_RS02935 SM00411 bacterial (prokaryotic) histone like domain DK41_RS02980 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. DK41_RS02990 SM00831 Cation transporter/ATPase, N-terminus DK41_RS03010 SM00937 DK41_RS03010 DK41_RS03015 SM00382 ATPases associated with a variety of cellular activities DK41_RS03030 SM00849 Metallo-beta-lactamase superfamily DK41_RS03045 SM00479 DK41_RS03045 DK41_RS03045 SM00491 DK41_RS03045 DK41_RS03125 SM00830 Chorismate mutase type II DK41_RS03170 SM00382 ATPases associated with a variety of cellular activities DK41_RS03180 SM00448 cheY-homologous receiver domain DK41_RS03180 SM00862 Transcriptional regulatory protein, C terminal DK41_RS03225 SM00387 Histidine kinase-like ATPases DK41_RS03225 SM00433 TopoisomeraseII DK41_RS03250 SM01192 DK41_RS03250 DK41_RS03250 SM01193 DK41_RS03250 DK41_RS03255 SM00892 DNA/RNA non-specific endonuclease DK41_RS03290 SM00470 ParB-like nuclease domain DK41_RS03325 SM00487 DEAD-like helicases superfamily DK41_RS03325 SM00490 helicase superfamily c-terminal domain DK41_RS03415 SM00530 Helix-turn-helix XRE-family like proteins DK41_RS03425 SM00448 cheY-homologous receiver domain DK41_RS03425 SM00862 Transcriptional regulatory protein, C terminal DK41_RS03430 SM00387 Histidine kinase-like ATPases DK41_RS03430 SM00388 His Kinase A (phosphoacceptor) domain DK41_RS03455 SM01005 Alanine racemase, C-terminal domain DK41_RS03460 SM00530 Helix-turn-helix XRE-family like proteins DK41_RS03480 SM00857 Resolvase, N terminal domain DK41_RS03550 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain DK41_RS03550 SM00437 Bacterial DNA topoisomerase I DNA-binding domain DK41_RS03550 SM00493 DK41_RS03550 DK41_RS03560 SM00487 DEAD-like helicases superfamily DK41_RS03560 SM00490 helicase superfamily c-terminal domain DK41_RS03585 SM00487 DEAD-like helicases superfamily DK41_RS03585 SM00490 helicase superfamily c-terminal domain DK41_RS03605 SM00382 ATPases associated with a variety of cellular activities DK41_RS03610 SM00382 ATPases associated with a variety of cellular activities DK41_RS03625 SM00382 ATPases associated with a variety of cellular activities DK41_RS03645 SM00857 Resolvase, N terminal domain DK41_RS03670 SM00382 ATPases associated with a variety of cellular activities DK41_RS03695 SM00822 DK41_RS03695 DK41_RS03710 SM00382 ATPases associated with a variety of cellular activities DK41_RS03730 SM00825 Beta-ketoacyl synthase DK41_RS03760 SM00382 ATPases associated with a variety of cellular activities DK41_RS03770 SM00892 DNA/RNA non-specific endonuclease DK41_RS03780 SM00382 ATPases associated with a variety of cellular activities DK41_RS03825 SM00345 helix_turn_helix gluconate operon transcriptional repressor DK41_RS03825 SM00895 DK41_RS03825 DK41_RS03875 SM00354 helix_turn _helix lactose operon repressor DK41_RS03880 SM00642 Alpha-amylase domain DK41_RS03895 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain DK41_RS03900 SM00448 cheY-homologous receiver domain DK41_RS03900 SM00862 Transcriptional regulatory protein, C terminal DK41_RS03925 SM00062 Bacterial periplasmic substrate-binding proteins DK41_RS03930 SM00382 ATPases associated with a variety of cellular activities DK41_RS03935 SM00448 cheY-homologous receiver domain DK41_RS03935 SM00862 Transcriptional regulatory protein, C terminal DK41_RS03940 SM00091 PAS domain DK41_RS03940 SM00387 Histidine kinase-like ATPases DK41_RS03940 SM00388 His Kinase A (phosphoacceptor) domain DK41_RS03945 SM00849 Metallo-beta-lactamase superfamily DK41_RS03955 SM00358 Double-stranded RNA binding motif DK41_RS03955 SM00535 Ribonuclease III family DK41_RS03960 SM00968 SMC proteins Flexible Hinge Domain DK41_RS03980 SM00382 ATPases associated with a variety of cellular activities DK41_RS03980 SM00962 SRP54-type protein, GTPase domain DK41_RS03980 SM00963 SRP54-type protein, helical bundle domain DK41_RS04015 SM00316 Ribosomal protein S1-like RNA-binding domain DK41_RS04015 SM00732 Likely ribonuclease with RNase H fold. DK41_RS04020 SM00731 SprT homologues. DK41_RS04110 SM00855 Phosphoglycerate mutase family DK41_RS04175 SM00855 Phosphoglycerate mutase family DK41_RS04185 SM00493 DK41_RS04185 DK41_RS04225 SM00382 ATPases associated with a variety of cellular activities DK41_RS04240 SM00487 DEAD-like helicases superfamily DK41_RS04240 SM00490 helicase superfamily c-terminal domain DK41_RS04255 SM00563 Phosphate acyltransferases DK41_RS04260 SM00278 Helix-hairpin-helix DNA-binding motif class 1 DK41_RS04265 SM00849 Metallo-beta-lactamase superfamily DK41_RS04275 SM00354 helix_turn _helix lactose operon repressor DK41_RS04300 SM01061 CAT RNA binding domain DK41_RS04360 SM00363 S4 RNA-binding domain DK41_RS04400 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain DK41_RS04420 SM00530 Helix-turn-helix XRE-family like proteins DK41_RS04475 SM00487 DEAD-like helicases superfamily DK41_RS04475 SM00490 helicase superfamily c-terminal domain DK41_RS04495 SM00382 ATPases associated with a variety of cellular activities DK41_RS04540 SM00382 ATPases associated with a variety of cellular activities DK41_RS04580 SM00116 Domain in cystathionine beta-synthase and other proteins. DK41_RS04605 SM00278 Helix-hairpin-helix DNA-binding motif class 1 DK41_RS04605 SM00292 breast cancer carboxy-terminal domain DK41_RS04605 SM00532 Ligase N family DK41_RS04610 SM00046 Diacylglycerol kinase catalytic domain (presumed) DK41_RS04615 SM00642 Alpha-amylase domain DK41_RS04620 SM00642 Alpha-amylase domain DK41_RS04670 SM00382 ATPases associated with a variety of cellular activities DK41_RS04695 SM00892 DNA/RNA non-specific endonuclease DK41_RS04710 SM00873 B3/4 domain DK41_RS04710 SM00874 tRNA synthetase B5 domain DK41_RS04710 SM00896 Ferredoxin-fold anticodon binding domain DK41_RS04750 SM00382 ATPases associated with a variety of cellular activities DK41_RS04760 SM00861 Transketolase, pyrimidine binding domain DK41_RS04820 SM00729 Elongator protein 3, MiaB family, Radical SAM DK41_RS04860 SM00562 DK41_RS04860 DK41_RS04865 SM00838 Elongation factor G C-terminus DK41_RS04870 SM00365 Leucine-rich repeat, SDS22-like subfamily DK41_RS04870 SM00369 Leucine-rich repeats, typical (most populated) subfamily DK41_RS04875 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. DK41_RS04890 SM00831 Cation transporter/ATPase, N-terminus DK41_RS04925 SM00382 ATPases associated with a variety of cellular activities DK41_RS04930 SM00345 helix_turn_helix gluconate operon transcriptional repressor DK41_RS04935 SM00481 DNA polymerase alpha chain like domain DK41_RS04970 SM00382 ATPases associated with a variety of cellular activities DK41_RS04975 SM00062 Bacterial periplasmic substrate-binding proteins DK41_RS05005 SM00382 ATPases associated with a variety of cellular activities DK41_RS05030 SM00434 DNA Topoisomerase IV DK41_RS05070 SM00345 helix_turn_helix gluconate operon transcriptional repressor DK41_RS05070 SM00866 DK41_RS05070 DK41_RS05095 SM00245 tail specific protease DK41_RS05100 SM00382 ATPases associated with a variety of cellular activities DK41_RS05110 SM00448 cheY-homologous receiver domain DK41_RS05110 SM00862 Transcriptional regulatory protein, C terminal DK41_RS05115 SM00387 Histidine kinase-like ATPases DK41_RS05140 SM00382 ATPases associated with a variety of cellular activities DK41_RS05140 SM00962 SRP54-type protein, GTPase domain DK41_RS05140 SM00963 SRP54-type protein, helical bundle domain DK41_RS05150 SM00387 Histidine kinase-like ATPases DK41_RS05150 SM00388 His Kinase A (phosphoacceptor) domain DK41_RS05155 SM00448 cheY-homologous receiver domain DK41_RS05155 SM00862 Transcriptional regulatory protein, C terminal DK41_RS05170 SM00382 ATPases associated with a variety of cellular activities DK41_RS05175 SM00382 ATPases associated with a variety of cellular activities DK41_RS05215 SM00904 Riboflavin kinase DK41_RS05250 SM00382 ATPases associated with a variety of cellular activities DK41_RS05255 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain DK41_RS05255 SM00437 Bacterial DNA topoisomerase I DNA-binding domain DK41_RS05255 SM00493 DK41_RS05255 DK41_RS05270 SM00382 ATPases associated with a variety of cellular activities DK41_RS05285 SM01266 DK41_RS05285 DK41_RS05310 SM00448 cheY-homologous receiver domain DK41_RS05310 SM00850 LytTr DNA-binding domain DK41_RS05315 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. DK41_RS05445 SM00851 MGS-like domain DK41_RS05445 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain DK41_RS05445 SM01209 DK41_RS05445 DK41_RS05450 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain DK41_RS05470 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family DK41_RS05480 SM00382 ATPases associated with a variety of cellular activities DK41_RS05490 SM00859 Semialdehyde dehydrogenase, NAD binding domain DK41_RS05500 SM00155 Phospholipase D. Active site motifs. DK41_RS05520 SM00506 Appr-1"-p processing enzyme DK41_RS05580 SM00382 ATPases associated with a variety of cellular activities DK41_RS05585 SM00382 ATPases associated with a variety of cellular activities DK41_RS05615 SM00937 DK41_RS05615 DK41_RS05660 SM01240 DK41_RS05660 DK41_RS05700 SM00954 Region found in RelA / SpoT proteins DK41_RS05705 SM01118 DK41_RS05705 DK41_RS05710 SM01400 DK41_RS05710 DK41_RS05725 SM00881 CoA binding domain DK41_RS05755 SM00342 helix_turn_helix, arabinose operon control protein DK41_RS05780 SM00382 ATPases associated with a variety of cellular activities DK41_RS05795 SM00905 Dihydroneopterin aldolase DK41_RS05870 SM00530 Helix-turn-helix XRE-family like proteins DK41_RS05895 SM00345 helix_turn_helix gluconate operon transcriptional repressor DK41_RS06025 SM00316 Ribosomal protein S1-like RNA-binding domain DK41_RS06050 SM00434 DNA Topoisomerase IV DK41_RS06055 SM00387 Histidine kinase-like ATPases DK41_RS06055 SM00433 TopoisomeraseII DK41_RS06060 SM01207 DK41_RS06060 DK41_RS06065 SM00986 Uracil DNA glycosylase superfamily DK41_RS06065 SM00987 UreE urease accessory protein, C-terminal domain DK41_RS06090 SM00858 DK41_RS06090 DK41_RS06215 SM00849 Metallo-beta-lactamase superfamily DK41_RS06220 SM00382 ATPases associated with a variety of cellular activities DK41_RS06250 SM00028 Tetratricopeptide repeats DK41_RS06315 SM00728 Clostridial hydrophobic, with a conserved W residue, domain. DK41_RS06370 SM00642 Alpha-amylase domain DK41_RS06380 SM00986 Uracil DNA glycosylase superfamily DK41_RS06380 SM00987 UreE urease accessory protein, C-terminal domain DK41_RS06400 SM00465 GIY-YIG type nucleases (URI domain) DK41_RS06495 SM00479 DK41_RS06495 DK41_RS06495 SM00497 Intron encoded nuclease repeat motif DK41_RS06570 SM00382 ATPases associated with a variety of cellular activities DK41_RS06570 SM01086 C-terminal, D2-small domain, of ClpB protein DK41_RS06605 SM00382 ATPases associated with a variety of cellular activities DK41_RS06605 SM00994 ClpX C4-type zinc finger DK41_RS06605 SM01086 C-terminal, D2-small domain, of ClpB protein DK41_RS06645 SM00046 Diacylglycerol kinase catalytic domain (presumed) DK41_RS06680 SM00387 Histidine kinase-like ATPases DK41_RS06680 SM00388 His Kinase A (phosphoacceptor) domain DK41_RS06685 SM00448 cheY-homologous receiver domain DK41_RS06685 SM00862 Transcriptional regulatory protein, C terminal DK41_RS06690 SM00954 Region found in RelA / SpoT proteins DK41_RS06695 SM00382 ATPases associated with a variety of cellular activities DK41_RS06700 SM00382 ATPases associated with a variety of cellular activities DK41_RS06705 SM00347 helix_turn_helix multiple antibiotic resistance protein DK41_RS06720 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase DK41_RS06730 SM00382 ATPases associated with a variety of cellular activities DK41_RS06735 SM00382 ATPases associated with a variety of cellular activities DK41_RS06745 SM00382 ATPases associated with a variety of cellular activities DK41_RS06790 SM00420 helix_turn_helix, Deoxyribose operon repressor DK41_RS06790 SM01134 DK41_RS06790 DK41_RS06800 SM00287 Bacterial SH3 domain homologues DK41_RS06860 SM00382 ATPases associated with a variety of cellular activities DK41_RS06870 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain DK41_RS06875 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain DK41_RS06885 SM00363 S4 RNA-binding domain DK41_RS06915 SM00854 Bacterial capsule synthesis protein PGA_cap DK41_RS06920 SM00981 DK41_RS06920 DK41_RS06990 SM00257 Lysin motif DK41_RS07020 SM00382 ATPases associated with a variety of cellular activities DK41_RS07045 SM01131 DK41_RS07045 DK41_RS07055 SM01091 Transporter associated domain DK41_RS07065 SM00729 Elongator protein 3, MiaB family, Radical SAM DK41_RS07070 SM00014 Acid phosphatase homologues DK41_RS07100 SM00327 von Willebrand factor (vWF) type A domain DK41_RS07195 SM00400 zinc finger DK41_RS07195 SM00493 DK41_RS07195 DK41_RS07215 SM00062 Bacterial periplasmic substrate-binding proteins DK41_RS07215 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. DK41_RS07230 SM00450 Rhodanese Homology Domain DK41_RS07260 SM00354 helix_turn _helix lactose operon repressor DK41_RS07305 SM00957 SecA DEAD-like domain DK41_RS07305 SM00958 SecA preprotein cross-linking domain DK41_RS07370 SM00487 DEAD-like helicases superfamily DK41_RS07370 SM00490 helicase superfamily c-terminal domain DK41_RS07380 SM00062 Bacterial periplasmic substrate-binding proteins DK41_RS07380 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. DK41_RS07385 SM00382 ATPases associated with a variety of cellular activities DK41_RS07425 SM00363 S4 RNA-binding domain DK41_RS07460 SM00316 Ribosomal protein S1-like RNA-binding domain DK41_RS07460 SM00955 DK41_RS07460 DK41_RS07480 SM00382 ATPases associated with a variety of cellular activities DK41_RS07490 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain DK41_RS07490 SM01232 DK41_RS07490 DK41_RS07495 SM00530 Helix-turn-helix XRE-family like proteins DK41_RS07500 SM00460 Transglutaminase/protease-like homologues DK41_RS07600 SM00382 ATPases associated with a variety of cellular activities DK41_RS07625 SM00649 Ribosomal protein L11/L12 DK41_RS07660 SM00382 ATPases associated with a variety of cellular activities DK41_RS07660 SM00843 DK41_RS07660 DK41_RS07675 SM00382 ATPases associated with a variety of cellular activities DK41_RS07685 SM00529 Helix-turn-helix diphteria tox regulatory element DK41_RS07685 SM00899 DK41_RS07685 DK41_RS07730 SM01022 DK41_RS07730 DK41_RS07900 SM00116 Domain in cystathionine beta-synthase and other proteins. DK41_RS07905 SM00382 ATPases associated with a variety of cellular activities DK41_RS07910 SM00382 ATPases associated with a variety of cellular activities DK41_RS07970 SM01234 DK41_RS07970 DK41_RS07975 SM00363 S4 RNA-binding domain DK41_RS08040 SM00967 RNA 2'-O ribose methyltransferase substrate binding DK41_RS08065 SM00062 Bacterial periplasmic substrate-binding proteins DK41_RS08100 SM00487 DEAD-like helicases superfamily DK41_RS08100 SM00490 helicase superfamily c-terminal domain DK41_RS08125 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DK41_RS08125 SM00387 Histidine kinase-like ATPases DK41_RS08125 SM00388 His Kinase A (phosphoacceptor) domain DK41_RS08130 SM00448 cheY-homologous receiver domain DK41_RS08130 SM00862 Transcriptional regulatory protein, C terminal DK41_RS08170 SM00382 ATPases associated with a variety of cellular activities DK41_RS08190 SM00829 Enoylreductase DK41_RS08205 SM00382 ATPases associated with a variety of cellular activities DK41_RS08205 SM00930 DK41_RS08205 DK41_RS08220 SM00062 Bacterial periplasmic substrate-binding proteins DK41_RS08250 SM01120 DK41_RS08250 DK41_RS08270 SM00422 helix_turn_helix, mercury resistance DK41_RS08300 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. DK41_RS08310 SM01103 DK41_RS08310 DK41_RS08330 SM00845 GatB domain DK41_RS08355 SM00116 Domain in cystathionine beta-synthase and other proteins. DK41_RS08390 SM00870 DK41_RS08390 DK41_RS08405 SM00487 DEAD-like helicases superfamily DK41_RS08405 SM00490 helicase superfamily c-terminal domain DK41_RS08415 SM01005 Alanine racemase, C-terminal domain DK41_RS08430 SM00957 SecA DEAD-like domain DK41_RS08430 SM00958 SecA preprotein cross-linking domain DK41_RS08455 SM00640 Glycosyl hydrolases family 32 DK41_RS08460 SM00354 helix_turn _helix lactose operon repressor DK41_RS08475 SM00841 Elongation factor P, C-terminal DK41_RS08475 SM01185 DK41_RS08475 DK41_RS08480 SM00382 ATPases associated with a variety of cellular activities DK41_RS08485 SM00382 ATPases associated with a variety of cellular activities DK41_RS08520 SM00347 helix_turn_helix multiple antibiotic resistance protein DK41_RS08520 SM00529 Helix-turn-helix diphteria tox regulatory element DK41_RS08545 SM00382 ATPases associated with a variety of cellular activities DK41_RS08580 SM00478 endonuclease III DK41_RS08585 SM00530 Helix-turn-helix XRE-family like proteins DK41_RS08595 SM00014 Acid phosphatase homologues DK41_RS08600 SM00463 Small MutS-related domain DK41_RS08600 SM00533 DNA-binding domain of DNA mismatch repair MUTS family DK41_RS08600 SM00534 ATPase domain of DNA mismatch repair MUTS family DK41_RS08625 SM00382 ATPases associated with a variety of cellular activities DK41_RS08690 SM00419 helix_turn_helix, cAMP Regulatory protein DK41_RS08695 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain DK41_RS08695 SM00940 X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal DK41_RS08710 SM00382 ATPases associated with a variety of cellular activities DK41_RS08715 SM00382 ATPases associated with a variety of cellular activities DK41_RS08760 SM00487 DEAD-like helicases superfamily DK41_RS08760 SM00490 helicase superfamily c-terminal domain DK41_RS08770 SM00470 ParB-like nuclease domain DK41_RS08785 SM00641 Glycosyl hydrolases family 25 DK41_RS08815 SM00047 Lysozyme subfamily 2 DK41_RS09095 SM00422 helix_turn_helix, mercury resistance DK41_RS09100 SM00479 DK41_RS09100 DK41_RS09150 SM00849 Metallo-beta-lactamase superfamily DK41_RS09160 SM01230 DK41_RS09160 DK41_RS09165 SM00422 helix_turn_helix, mercury resistance DK41_RS09190 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DK41_RS09195 SM00838 Elongation factor G C-terminus DK41_RS09195 SM00889 Elongation factor G, domain IV DK41_RS09225 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain DK41_RS09245 SM00650 Ribosomal RNA adenine dimethylases DK41_RS09255 SM00493 DK41_RS09255 DK41_RS09310 SM00387 Histidine kinase-like ATPases DK41_RS09310 SM00388 His Kinase A (phosphoacceptor) domain DK41_RS09315 SM00448 cheY-homologous receiver domain DK41_RS09315 SM00862 Transcriptional regulatory protein, C terminal DK41_RS09355 SM00530 Helix-turn-helix XRE-family like proteins DK41_RS09365 SM00857 Resolvase, N terminal domain DK41_RS09370 SM00650 Ribosomal RNA adenine dimethylases DK41_RS09385 SM00889 Elongation factor G, domain IV DK41_RS09425 SM00530 Helix-turn-helix XRE-family like proteins DK41_RS09450 SM00382 ATPases associated with a variety of cellular activities DK41_RS09500 SM00354 helix_turn _helix lactose operon repressor DK41_RS09510 SM01007 Class II Aldolase and Adducin N-terminal domain DK41_RS09520 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family DK41_RS09555 SM00788 Adenylosuccinate synthetase DK41_RS09605 SM00382 ATPases associated with a variety of cellular activities DK41_RS09605 SM01086 C-terminal, D2-small domain, of ClpB protein DK41_RS09665 SM00530 Helix-turn-helix XRE-family like proteins DK41_RS09735 SM00100 Cyclic nucleotide-monophosphate binding domain DK41_RS09745 SM00354 helix_turn _helix lactose operon repressor DK41_RS09810 SM00347 helix_turn_helix multiple antibiotic resistance protein DK41_RS09815 SM00479 DK41_RS09815 DK41_RS09815 SM00481 DNA polymerase alpha chain like domain DK41_RS09820 SM00047 Lysozyme subfamily 2 DK41_RS09845 SM01323 DK41_RS09845 DK41_RS09855 SM00919 Malic enzyme, NAD binding domain DK41_RS09855 SM01274 DK41_RS09855 DK41_RS09870 SM00448 cheY-homologous receiver domain DK41_RS09880 SM00642 Alpha-amylase domain DK41_RS09885 SM00382 ATPases associated with a variety of cellular activities DK41_RS09900 SM01133 DK41_RS09900 DK41_RS09940 SM00420 helix_turn_helix, Deoxyribose operon repressor DK41_RS09940 SM01134 DK41_RS09940 DK41_RS09970 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. DK41_RS09970 SM00954 Region found in RelA / SpoT proteins DK41_RS10005 SM00342 helix_turn_helix, arabinose operon control protein DK41_RS10005 SM00448 cheY-homologous receiver domain DK41_RS10045 SM00382 ATPases associated with a variety of cellular activities DK41_RS10055 SM00448 cheY-homologous receiver domain DK41_RS10055 SM00850 LytTr DNA-binding domain DK41_RS10070 SM00387 Histidine kinase-like ATPases DK41_RS10070 SM00388 His Kinase A (phosphoacceptor) domain DK41_RS10075 SM00448 cheY-homologous receiver domain DK41_RS10075 SM00862 Transcriptional regulatory protein, C terminal DK41_RS10085 SM00382 ATPases associated with a variety of cellular activities DK41_RS10140 SM00530 Helix-turn-helix XRE-family like proteins DK41_RS10150 SM00382 ATPases associated with a variety of cellular activities DK41_RS10220 SM00382 ATPases associated with a variety of cellular activities DK41_RS10230 SM00530 Helix-turn-helix XRE-family like proteins DK41_RS10240 SM00014 Acid phosphatase homologues DK41_RS10260 SM00450 Rhodanese Homology Domain DK41_RS10320 SM00448 cheY-homologous receiver domain DK41_RS10320 SM00862 Transcriptional regulatory protein, C terminal DK41_RS10325 SM00387 Histidine kinase-like ATPases DK41_RS10325 SM00388 His Kinase A (phosphoacceptor) domain DK41_RS10360 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. DK41_RS10360 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. DK41_RS10395 SM01133 DK41_RS10395 DK41_RS10410 SM00345 helix_turn_helix gluconate operon transcriptional repressor DK41_RS10425 SM00883 Chaperonin 10 Kd subunit DK41_RS10430 SM00382 ATPases associated with a variety of cellular activities DK41_RS10500 SM00732 Likely ribonuclease with RNase H fold. DK41_RS10515 SM00382 ATPases associated with a variety of cellular activities DK41_RS10520 SM00852 Probable molybdopterin binding domain DK41_RS10530 SM00278 Helix-hairpin-helix DNA-binding motif class 1 DK41_RS10540 SM00853 MutL C terminal dimerisation domain DK41_RS10540 SM01340 DK41_RS10540 DK41_RS10545 SM00357 Cold shock protein domain DK41_RS10550 SM00533 DNA-binding domain of DNA mismatch repair MUTS family DK41_RS10550 SM00534 ATPase domain of DNA mismatch repair MUTS family DK41_RS10560 SM00836 DALR anticodon binding domain DK41_RS10560 SM01016 Arginyl tRNA synthetase N terminal dom DK41_RS10640 SM00530 Helix-turn-helix XRE-family like proteins DK41_RS10660 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor DK41_RS10720 SM00448 cheY-homologous receiver domain DK41_RS10720 SM00862 Transcriptional regulatory protein, C terminal DK41_RS10725 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DK41_RS10725 SM00387 Histidine kinase-like ATPases DK41_RS10725 SM00388 His Kinase A (phosphoacceptor) domain DK41_RS10750 SM00387 Histidine kinase-like ATPases DK41_RS10755 SM00448 cheY-homologous receiver domain DK41_RS10760 SM00382 ATPases associated with a variety of cellular activities DK41_RS10840 SM00942 Primase C terminal 1 (PriCT-1) DK41_RS10875 SM01040 BRO family, N-terminal domain DK41_RS10880 SM01040 BRO family, N-terminal domain DK41_RS10890 SM00530 Helix-turn-helix XRE-family like proteins DK41_RS10905 SM00363 S4 RNA-binding domain DK41_RS10905 SM01390 DK41_RS10905 DK41_RS10930 SM01228 DK41_RS10930 DK41_RS10965 SM00257 Lysin motif DK41_RS10975 SM00382 ATPases associated with a variety of cellular activities DK41_RS10980 SM00382 ATPases associated with a variety of cellular activities DK41_RS11025 SM00530 Helix-turn-helix XRE-family like proteins DK41_RS11030 SM00116 Domain in cystathionine beta-synthase and other proteins. DK41_RS11030 SM01240 DK41_RS11030 DK41_RS11040 SM00419 helix_turn_helix, cAMP Regulatory protein DK41_RS11045 SM00873 B3/4 domain DK41_RS11095 SM00382 ATPases associated with a variety of cellular activities DK41_RS11125 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. DK41_RS11130 SM00470 ParB-like nuclease domain