DK42_RS00005 SM00382 ATPases associated with a variety of cellular activities DK42_RS00005 SM00760 Bacterial dnaA protein helix-turn-helix domain DK42_RS00010 SM00480 DNA polymerase III beta subunit DK42_RS00045 SM00487 DEAD-like helicases superfamily DK42_RS00045 SM00490 helicase superfamily c-terminal domain DK42_RS00045 SM00982 DK42_RS00045 DK42_RS00045 SM01058 CarD-like/TRCF domain DK42_RS00050 SM00363 S4 RNA-binding domain DK42_RS00070 SM00977 TilS substrate C-terminal domain DK42_RS00080 SM00382 ATPases associated with a variety of cellular activities DK42_RS00260 SM01400 DK42_RS00260 DK42_RS00300 SM01211 DK42_RS00300 DK42_RS00330 SM00798 AICARFT/IMPCHase bienzyme DK42_RS00330 SM00851 MGS-like domain DK42_RS00340 SM00257 Lysin motif DK42_RS00375 SM01130 DK42_RS00375 DK42_RS00395 SM01209 DK42_RS00395 DK42_RS00395 SM01210 DK42_RS00395 DK42_RS00400 SM01001 AIR carboxylase DK42_RS00430 SM00998 Adenylosuccinate lyase C-terminus DK42_RS00435 SM00530 Helix-turn-helix XRE-family like proteins DK42_RS00440 SM00382 ATPases associated with a variety of cellular activities DK42_RS00445 SM00226 Low molecular weight phosphatase family DK42_RS00450 SM00698 Possible plasma membrane-binding motif in junctophilins, PIP-5-kinases and protein kinases. DK42_RS00465 SM00829 Enoylreductase DK42_RS00480 SM01403 DK42_RS00480 DK42_RS00500 SM01382 DK42_RS00500 DK42_RS00500 SM01383 DK42_RS00500 DK42_RS00515 SM00322 K homology RNA-binding domain DK42_RS00535 SM01374 DK42_RS00535 DK42_RS00540 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. DK42_RS00595 SM00316 Ribosomal protein S1-like RNA-binding domain DK42_RS00610 SM00662 RNA polymerases D DK42_RS00745 SM00855 Phosphoglycerate mutase family DK42_RS00755 SM00047 Lysozyme subfamily 2 DK42_RS00775 SM00271 DnaJ molecular chaperone homology domain DK42_RS00780 SM00345 helix_turn_helix gluconate operon transcriptional repressor DK42_RS00840 SM00382 ATPases associated with a variety of cellular activities DK42_RS00845 SM00947 Carbonic anhydrase DK42_RS00870 SM00382 ATPases associated with a variety of cellular activities DK42_RS00885 SM00354 helix_turn _helix lactose operon repressor DK42_RS00895 SM00382 ATPases associated with a variety of cellular activities DK42_RS00900 SM00448 cheY-homologous receiver domain DK42_RS00900 SM00862 Transcriptional regulatory protein, C terminal DK42_RS00905 SM00387 Histidine kinase-like ATPases DK42_RS00905 SM00388 His Kinase A (phosphoacceptor) domain DK42_RS00940 SM01120 DK42_RS00940 DK42_RS00940 SM01121 DK42_RS00940 DK42_RS00945 SM00244 prohibitin homologues DK42_RS00960 SM00382 ATPases associated with a variety of cellular activities DK42_RS00965 SM00062 Bacterial periplasmic substrate-binding proteins DK42_RS01000 SM00382 ATPases associated with a variety of cellular activities DK42_RS01030 SM00936 Penicillin-binding protein 5, C-terminal domain DK42_RS01050 SM00382 ATPases associated with a variety of cellular activities DK42_RS01055 SM00382 ATPases associated with a variety of cellular activities DK42_RS01090 SM00347 helix_turn_helix multiple antibiotic resistance protein DK42_RS01095 SM00382 ATPases associated with a variety of cellular activities DK42_RS01105 SM00892 DNA/RNA non-specific endonuclease DK42_RS01110 SM00363 S4 RNA-binding domain DK42_RS01125 SM00663 RNA polymerase I subunit A N-terminus DK42_RS01230 SM00387 Histidine kinase-like ATPases DK42_RS01235 SM00448 cheY-homologous receiver domain DK42_RS01235 SM00850 LytTr DNA-binding domain DK42_RS01265 SM00382 ATPases associated with a variety of cellular activities DK42_RS01270 SM00382 ATPases associated with a variety of cellular activities DK42_RS01280 SM00642 Alpha-amylase domain DK42_RS01305 SM00861 Transketolase, pyrimidine binding domain DK42_RS01315 SM01387 DK42_RS01315 DK42_RS01320 SM00316 Ribosomal protein S1-like RNA-binding domain DK42_RS01320 SM00322 K homology RNA-binding domain DK42_RS01340 SM00840 DK42_RS01340 DK42_RS01355 SM00967 RNA 2'-O ribose methyltransferase substrate binding DK42_RS01390 SM00530 Helix-turn-helix XRE-family like proteins DK42_RS01485 SM00530 Helix-turn-helix XRE-family like proteins DK42_RS01510 SM00116 Domain in cystathionine beta-synthase and other proteins. DK42_RS01510 SM00382 ATPases associated with a variety of cellular activities DK42_RS01635 SM00382 ATPases associated with a variety of cellular activities DK42_RS01715 SM00861 Transketolase, pyrimidine binding domain DK42_RS01725 SM00382 ATPases associated with a variety of cellular activities DK42_RS01760 SM00740 DK42_RS01760 DK42_RS01770 SM00487 DEAD-like helicases superfamily DK42_RS01770 SM00490 helicase superfamily c-terminal domain DK42_RS01775 SM00062 Bacterial periplasmic substrate-binding proteins DK42_RS01785 SM00382 ATPases associated with a variety of cellular activities DK42_RS01840 SM00981 DK42_RS01840 DK42_RS01855 SM00322 K homology RNA-binding domain DK42_RS01855 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. DK42_RS01860 SM00382 ATPases associated with a variety of cellular activities DK42_RS01875 SM00421 helix_turn_helix, Lux Regulon DK42_RS01875 SM00448 cheY-homologous receiver domain DK42_RS01885 SM00072 Guanylate kinase homologues. DK42_RS01890 SM01409 DK42_RS01890 DK42_RS01895 SM00487 DEAD-like helicases superfamily DK42_RS01895 SM00490 helicase superfamily c-terminal domain DK42_RS01910 SM00331 Sigma factor PP2C-like phosphatases DK42_RS01910 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain DK42_RS01915 SM00220 Serine/Threonine protein kinases, catalytic domain DK42_RS01915 SM00740 DK42_RS01915 DK42_RS01930 SM00421 helix_turn_helix, Lux Regulon DK42_RS01930 SM00448 cheY-homologous receiver domain DK42_RS01940 SM00316 Ribosomal protein S1-like RNA-binding domain DK42_RS01950 SM00420 helix_turn_helix, Deoxyribose operon repressor DK42_RS01950 SM01134 DK42_RS01950 DK42_RS02000 SM00487 DEAD-like helicases superfamily DK42_RS02000 SM00490 helicase superfamily c-terminal domain DK42_RS02055 SM00347 helix_turn_helix multiple antibiotic resistance protein DK42_RS02075 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. DK42_RS02080 SM00822 DK42_RS02080 DK42_RS02085 SM00825 Beta-ketoacyl synthase DK42_RS02100 SM00878 Biotin carboxylase C-terminal domain DK42_RS02215 SM00382 ATPases associated with a variety of cellular activities DK42_RS02245 SM00322 K homology RNA-binding domain DK42_RS02300 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs DK42_RS02300 SM00474 3'-5' exonuclease DK42_RS02300 SM00475 5'-3' exonuclease DK42_RS02300 SM00482 DNA polymerase A domain DK42_RS02305 SM00881 CoA binding domain DK42_RS02325 SM00448 cheY-homologous receiver domain DK42_RS02325 SM00862 Transcriptional regulatory protein, C terminal DK42_RS02330 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DK42_RS02330 SM00387 Histidine kinase-like ATPases DK42_RS02330 SM00388 His Kinase A (phosphoacceptor) domain DK42_RS02355 SM00849 Metallo-beta-lactamase superfamily DK42_RS02415 SM00393 Putative single-stranded nucleic acids-binding domain DK42_RS02415 SM01245 DK42_RS02415 DK42_RS02545 SM00871 Bacterial transcription activator, effector binding domain DK42_RS02560 SM00422 helix_turn_helix, mercury resistance DK42_RS02585 SM00342 helix_turn_helix, arabinose operon control protein DK42_RS02705 SM00382 ATPases associated with a variety of cellular activities DK42_RS02710 SM00382 ATPases associated with a variety of cellular activities DK42_RS02725 SM00729 Elongator protein 3, MiaB family, Radical SAM DK42_RS02725 SM00876 Biotin and Thiamin Synthesis associated domain DK42_RS02745 SM00478 endonuclease III DK42_RS02765 SM00450 Rhodanese Homology Domain DK42_RS02770 SM00838 Elongation factor G C-terminus DK42_RS02795 SM00842 Cell division protein FtsA DK42_RS02800 SM00864 Tubulin/FtsZ family, GTPase domain DK42_RS02800 SM00865 Tubulin/FtsZ family, C-terminal domain DK42_RS02820 SM00363 S4 RNA-binding domain DK42_RS02845 SM00382 ATPases associated with a variety of cellular activities DK42_RS02845 SM01086 C-terminal, D2-small domain, of ClpB protein DK42_RS02865 SM00382 ATPases associated with a variety of cellular activities DK42_RS02900 SM00363 S4 RNA-binding domain DK42_RS02930 SM00411 bacterial (prokaryotic) histone like domain DK42_RS02965 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. DK42_RS02975 SM00831 Cation transporter/ATPase, N-terminus DK42_RS02995 SM00937 DK42_RS02995 DK42_RS03000 SM00382 ATPases associated with a variety of cellular activities DK42_RS03015 SM00849 Metallo-beta-lactamase superfamily DK42_RS03030 SM00479 DK42_RS03030 DK42_RS03030 SM00491 DK42_RS03030 DK42_RS03105 SM00830 Chorismate mutase type II DK42_RS03135 SM00954 Region found in RelA / SpoT proteins DK42_RS03140 SM00530 Helix-turn-helix XRE-family like proteins DK42_RS03155 SM00530 Helix-turn-helix XRE-family like proteins DK42_RS03180 SM00530 Helix-turn-helix XRE-family like proteins DK42_RS03280 SM00507 HNH nucleases DK42_RS03370 SM00047 Lysozyme subfamily 2 DK42_RS03440 SM00382 ATPases associated with a variety of cellular activities DK42_RS03450 SM00448 cheY-homologous receiver domain DK42_RS03450 SM00862 Transcriptional regulatory protein, C terminal DK42_RS03495 SM00387 Histidine kinase-like ATPases DK42_RS03495 SM00433 TopoisomeraseII DK42_RS03520 SM01192 DK42_RS03520 DK42_RS03520 SM01193 DK42_RS03520 DK42_RS03525 SM00892 DNA/RNA non-specific endonuclease DK42_RS03575 SM00470 ParB-like nuclease domain DK42_RS03610 SM00487 DEAD-like helicases superfamily DK42_RS03700 SM00448 cheY-homologous receiver domain DK42_RS03700 SM00862 Transcriptional regulatory protein, C terminal DK42_RS03705 SM00387 Histidine kinase-like ATPases DK42_RS03705 SM00388 His Kinase A (phosphoacceptor) domain DK42_RS03730 SM01005 Alanine racemase, C-terminal domain DK42_RS03735 SM00530 Helix-turn-helix XRE-family like proteins DK42_RS03755 SM00857 Resolvase, N terminal domain DK42_RS03825 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain DK42_RS03825 SM00437 Bacterial DNA topoisomerase I DNA-binding domain DK42_RS03825 SM00493 DK42_RS03825 DK42_RS03835 SM00487 DEAD-like helicases superfamily DK42_RS03835 SM00490 helicase superfamily c-terminal domain DK42_RS03860 SM00487 DEAD-like helicases superfamily DK42_RS03860 SM00490 helicase superfamily c-terminal domain DK42_RS03880 SM00382 ATPases associated with a variety of cellular activities DK42_RS03885 SM00382 ATPases associated with a variety of cellular activities DK42_RS03900 SM00382 ATPases associated with a variety of cellular activities DK42_RS03920 SM00857 Resolvase, N terminal domain DK42_RS03945 SM00382 ATPases associated with a variety of cellular activities DK42_RS03970 SM00822 DK42_RS03970 DK42_RS03985 SM00382 ATPases associated with a variety of cellular activities DK42_RS04005 SM00825 Beta-ketoacyl synthase DK42_RS04035 SM00382 ATPases associated with a variety of cellular activities DK42_RS04045 SM00892 DNA/RNA non-specific endonuclease DK42_RS04055 SM00382 ATPases associated with a variety of cellular activities DK42_RS04100 SM00345 helix_turn_helix gluconate operon transcriptional repressor DK42_RS04100 SM00895 DK42_RS04100 DK42_RS04145 SM00354 helix_turn _helix lactose operon repressor DK42_RS04150 SM00642 Alpha-amylase domain DK42_RS04165 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain DK42_RS04170 SM00448 cheY-homologous receiver domain DK42_RS04170 SM00862 Transcriptional regulatory protein, C terminal DK42_RS04195 SM00062 Bacterial periplasmic substrate-binding proteins DK42_RS04200 SM00382 ATPases associated with a variety of cellular activities DK42_RS04205 SM00448 cheY-homologous receiver domain DK42_RS04205 SM00862 Transcriptional regulatory protein, C terminal DK42_RS04210 SM00091 PAS domain DK42_RS04210 SM00387 Histidine kinase-like ATPases DK42_RS04210 SM00388 His Kinase A (phosphoacceptor) domain DK42_RS04215 SM00849 Metallo-beta-lactamase superfamily DK42_RS04225 SM00358 Double-stranded RNA binding motif DK42_RS04225 SM00535 Ribonuclease III family DK42_RS04230 SM00968 SMC proteins Flexible Hinge Domain DK42_RS04250 SM00382 ATPases associated with a variety of cellular activities DK42_RS04250 SM00962 SRP54-type protein, GTPase domain DK42_RS04250 SM00963 SRP54-type protein, helical bundle domain DK42_RS04285 SM00316 Ribosomal protein S1-like RNA-binding domain DK42_RS04285 SM00732 Likely ribonuclease with RNase H fold. DK42_RS04290 SM00731 SprT homologues. DK42_RS04390 SM00855 Phosphoglycerate mutase family DK42_RS04450 SM00855 Phosphoglycerate mutase family DK42_RS04460 SM00493 DK42_RS04460 DK42_RS04500 SM00382 ATPases associated with a variety of cellular activities DK42_RS04515 SM00487 DEAD-like helicases superfamily DK42_RS04515 SM00490 helicase superfamily c-terminal domain DK42_RS04530 SM00563 Phosphate acyltransferases DK42_RS04535 SM00278 Helix-hairpin-helix DNA-binding motif class 1 DK42_RS04540 SM00849 Metallo-beta-lactamase superfamily DK42_RS04550 SM00354 helix_turn _helix lactose operon repressor DK42_RS04575 SM01061 CAT RNA binding domain DK42_RS04635 SM00363 S4 RNA-binding domain DK42_RS04675 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain DK42_RS04695 SM00530 Helix-turn-helix XRE-family like proteins DK42_RS04750 SM00487 DEAD-like helicases superfamily DK42_RS04750 SM00490 helicase superfamily c-terminal domain DK42_RS04770 SM00382 ATPases associated with a variety of cellular activities DK42_RS04815 SM00382 ATPases associated with a variety of cellular activities DK42_RS04855 SM00116 Domain in cystathionine beta-synthase and other proteins. DK42_RS04880 SM00278 Helix-hairpin-helix DNA-binding motif class 1 DK42_RS04880 SM00292 breast cancer carboxy-terminal domain DK42_RS04880 SM00532 Ligase N family DK42_RS04885 SM00046 Diacylglycerol kinase catalytic domain (presumed) DK42_RS04890 SM00642 Alpha-amylase domain DK42_RS04895 SM00642 Alpha-amylase domain DK42_RS04945 SM00382 ATPases associated with a variety of cellular activities DK42_RS04970 SM00892 DNA/RNA non-specific endonuclease DK42_RS04985 SM00873 B3/4 domain DK42_RS04985 SM00874 tRNA synthetase B5 domain DK42_RS04985 SM00896 Ferredoxin-fold anticodon binding domain DK42_RS05015 SM00382 ATPases associated with a variety of cellular activities DK42_RS05025 SM00861 Transketolase, pyrimidine binding domain DK42_RS05090 SM00729 Elongator protein 3, MiaB family, Radical SAM DK42_RS05130 SM00562 DK42_RS05130 DK42_RS05135 SM00838 Elongation factor G C-terminus DK42_RS05140 SM00365 Leucine-rich repeat, SDS22-like subfamily DK42_RS05140 SM00369 Leucine-rich repeats, typical (most populated) subfamily DK42_RS05145 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. DK42_RS05160 SM00831 Cation transporter/ATPase, N-terminus DK42_RS05195 SM00382 ATPases associated with a variety of cellular activities DK42_RS05200 SM00345 helix_turn_helix gluconate operon transcriptional repressor DK42_RS05205 SM00481 DNA polymerase alpha chain like domain DK42_RS05240 SM00382 ATPases associated with a variety of cellular activities DK42_RS05245 SM00062 Bacterial periplasmic substrate-binding proteins DK42_RS05275 SM00382 ATPases associated with a variety of cellular activities DK42_RS05300 SM00434 DNA Topoisomerase IV DK42_RS05340 SM00345 helix_turn_helix gluconate operon transcriptional repressor DK42_RS05340 SM00866 DK42_RS05340 DK42_RS05365 SM00245 tail specific protease DK42_RS05370 SM00382 ATPases associated with a variety of cellular activities DK42_RS05380 SM00448 cheY-homologous receiver domain DK42_RS05380 SM00862 Transcriptional regulatory protein, C terminal DK42_RS05385 SM00387 Histidine kinase-like ATPases DK42_RS05410 SM00382 ATPases associated with a variety of cellular activities DK42_RS05410 SM00962 SRP54-type protein, GTPase domain DK42_RS05410 SM00963 SRP54-type protein, helical bundle domain DK42_RS05420 SM00387 Histidine kinase-like ATPases DK42_RS05420 SM00388 His Kinase A (phosphoacceptor) domain DK42_RS05425 SM00448 cheY-homologous receiver domain DK42_RS05425 SM00862 Transcriptional regulatory protein, C terminal DK42_RS05440 SM00382 ATPases associated with a variety of cellular activities DK42_RS05445 SM00382 ATPases associated with a variety of cellular activities DK42_RS05485 SM00904 Riboflavin kinase DK42_RS05520 SM00382 ATPases associated with a variety of cellular activities DK42_RS05525 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain DK42_RS05525 SM00437 Bacterial DNA topoisomerase I DNA-binding domain DK42_RS05525 SM00493 DK42_RS05525 DK42_RS05540 SM00382 ATPases associated with a variety of cellular activities DK42_RS05555 SM01266 DK42_RS05555 DK42_RS05580 SM00448 cheY-homologous receiver domain DK42_RS05580 SM00850 LytTr DNA-binding domain DK42_RS05585 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. DK42_RS05705 SM00851 MGS-like domain DK42_RS05705 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain DK42_RS05705 SM01209 DK42_RS05705 DK42_RS05710 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain DK42_RS05730 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family DK42_RS05740 SM00382 ATPases associated with a variety of cellular activities DK42_RS05750 SM00859 Semialdehyde dehydrogenase, NAD binding domain DK42_RS05760 SM00155 Phospholipase D. Active site motifs. DK42_RS05780 SM00506 Appr-1"-p processing enzyme DK42_RS05840 SM00382 ATPases associated with a variety of cellular activities DK42_RS05845 SM00382 ATPases associated with a variety of cellular activities DK42_RS05875 SM00937 DK42_RS05875 DK42_RS05920 SM01240 DK42_RS05920 DK42_RS05960 SM00954 Region found in RelA / SpoT proteins DK42_RS05965 SM01118 DK42_RS05965 DK42_RS05970 SM01400 DK42_RS05970 DK42_RS05985 SM00881 CoA binding domain DK42_RS06015 SM00342 helix_turn_helix, arabinose operon control protein DK42_RS06040 SM00382 ATPases associated with a variety of cellular activities DK42_RS06055 SM00905 Dihydroneopterin aldolase DK42_RS06130 SM00530 Helix-turn-helix XRE-family like proteins DK42_RS06155 SM00345 helix_turn_helix gluconate operon transcriptional repressor DK42_RS06275 SM00316 Ribosomal protein S1-like RNA-binding domain DK42_RS06300 SM00434 DNA Topoisomerase IV DK42_RS06305 SM00387 Histidine kinase-like ATPases DK42_RS06305 SM00433 TopoisomeraseII DK42_RS06310 SM01207 DK42_RS06310 DK42_RS06315 SM00986 Uracil DNA glycosylase superfamily DK42_RS06315 SM00987 UreE urease accessory protein, C-terminal domain DK42_RS06340 SM00858 DK42_RS06340 DK42_RS06470 SM00849 Metallo-beta-lactamase superfamily DK42_RS06475 SM00382 ATPases associated with a variety of cellular activities DK42_RS06505 SM00028 Tetratricopeptide repeats DK42_RS06570 SM00728 Clostridial hydrophobic, with a conserved W residue, domain. DK42_RS06620 SM00642 Alpha-amylase domain DK42_RS06630 SM00986 Uracil DNA glycosylase superfamily DK42_RS06630 SM00987 UreE urease accessory protein, C-terminal domain DK42_RS06650 SM00465 GIY-YIG type nucleases (URI domain) DK42_RS06745 SM00479 DK42_RS06745 DK42_RS06745 SM00497 Intron encoded nuclease repeat motif DK42_RS06820 SM00382 ATPases associated with a variety of cellular activities DK42_RS06820 SM01086 C-terminal, D2-small domain, of ClpB protein DK42_RS06855 SM00382 ATPases associated with a variety of cellular activities DK42_RS06855 SM00994 ClpX C4-type zinc finger DK42_RS06855 SM01086 C-terminal, D2-small domain, of ClpB protein DK42_RS06895 SM00046 Diacylglycerol kinase catalytic domain (presumed) DK42_RS06930 SM00387 Histidine kinase-like ATPases DK42_RS06930 SM00388 His Kinase A (phosphoacceptor) domain DK42_RS06935 SM00448 cheY-homologous receiver domain DK42_RS06935 SM00862 Transcriptional regulatory protein, C terminal DK42_RS06940 SM00954 Region found in RelA / SpoT proteins DK42_RS06945 SM00382 ATPases associated with a variety of cellular activities DK42_RS06950 SM00382 ATPases associated with a variety of cellular activities DK42_RS06955 SM00347 helix_turn_helix multiple antibiotic resistance protein DK42_RS06970 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase DK42_RS06980 SM00382 ATPases associated with a variety of cellular activities DK42_RS06985 SM00382 ATPases associated with a variety of cellular activities DK42_RS06995 SM00382 ATPases associated with a variety of cellular activities DK42_RS07040 SM00420 helix_turn_helix, Deoxyribose operon repressor DK42_RS07040 SM01134 DK42_RS07040 DK42_RS07050 SM00287 Bacterial SH3 domain homologues DK42_RS07110 SM00382 ATPases associated with a variety of cellular activities DK42_RS07120 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain DK42_RS07125 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain DK42_RS07135 SM00363 S4 RNA-binding domain DK42_RS07165 SM00854 Bacterial capsule synthesis protein PGA_cap DK42_RS07170 SM00981 DK42_RS07170 DK42_RS07240 SM00257 Lysin motif DK42_RS07270 SM00382 ATPases associated with a variety of cellular activities DK42_RS07295 SM01131 DK42_RS07295 DK42_RS07305 SM01091 Transporter associated domain DK42_RS07315 SM00729 Elongator protein 3, MiaB family, Radical SAM DK42_RS07320 SM00014 Acid phosphatase homologues DK42_RS07350 SM00327 von Willebrand factor (vWF) type A domain DK42_RS07445 SM00400 zinc finger DK42_RS07445 SM00493 DK42_RS07445 DK42_RS07465 SM00062 Bacterial periplasmic substrate-binding proteins DK42_RS07465 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. DK42_RS07480 SM00450 Rhodanese Homology Domain DK42_RS07510 SM00354 helix_turn _helix lactose operon repressor DK42_RS07555 SM00957 SecA DEAD-like domain DK42_RS07555 SM00958 SecA preprotein cross-linking domain DK42_RS07620 SM00487 DEAD-like helicases superfamily DK42_RS07620 SM00490 helicase superfamily c-terminal domain DK42_RS07630 SM00062 Bacterial periplasmic substrate-binding proteins DK42_RS07630 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. DK42_RS07635 SM00382 ATPases associated with a variety of cellular activities DK42_RS07675 SM00363 S4 RNA-binding domain DK42_RS07710 SM00316 Ribosomal protein S1-like RNA-binding domain DK42_RS07710 SM00955 DK42_RS07710 DK42_RS07730 SM00382 ATPases associated with a variety of cellular activities DK42_RS07740 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain DK42_RS07740 SM01232 DK42_RS07740 DK42_RS07745 SM00530 Helix-turn-helix XRE-family like proteins DK42_RS07750 SM00460 Transglutaminase/protease-like homologues DK42_RS07850 SM00382 ATPases associated with a variety of cellular activities DK42_RS07875 SM00649 Ribosomal protein L11/L12 DK42_RS07910 SM00382 ATPases associated with a variety of cellular activities DK42_RS07910 SM00843 DK42_RS07910 DK42_RS07925 SM00382 ATPases associated with a variety of cellular activities DK42_RS07935 SM00529 Helix-turn-helix diphteria tox regulatory element DK42_RS07935 SM00899 DK42_RS07935 DK42_RS07980 SM01022 DK42_RS07980 DK42_RS08135 SM00116 Domain in cystathionine beta-synthase and other proteins. DK42_RS08140 SM00382 ATPases associated with a variety of cellular activities DK42_RS08145 SM00382 ATPases associated with a variety of cellular activities DK42_RS08205 SM01234 DK42_RS08205 DK42_RS08210 SM00363 S4 RNA-binding domain DK42_RS08275 SM00967 RNA 2'-O ribose methyltransferase substrate binding DK42_RS08295 SM00062 Bacterial periplasmic substrate-binding proteins DK42_RS08330 SM00487 DEAD-like helicases superfamily DK42_RS08330 SM00490 helicase superfamily c-terminal domain DK42_RS08355 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DK42_RS08355 SM00387 Histidine kinase-like ATPases DK42_RS08355 SM00388 His Kinase A (phosphoacceptor) domain DK42_RS08360 SM00448 cheY-homologous receiver domain DK42_RS08360 SM00862 Transcriptional regulatory protein, C terminal DK42_RS08400 SM00382 ATPases associated with a variety of cellular activities DK42_RS08420 SM00829 Enoylreductase DK42_RS08435 SM00382 ATPases associated with a variety of cellular activities DK42_RS08435 SM00930 DK42_RS08435 DK42_RS08450 SM00062 Bacterial periplasmic substrate-binding proteins DK42_RS08480 SM01120 DK42_RS08480 DK42_RS08500 SM00422 helix_turn_helix, mercury resistance DK42_RS08530 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. DK42_RS08540 SM01103 DK42_RS08540 DK42_RS08560 SM00845 GatB domain DK42_RS08585 SM00116 Domain in cystathionine beta-synthase and other proteins. DK42_RS08620 SM00870 DK42_RS08620 DK42_RS08635 SM00487 DEAD-like helicases superfamily DK42_RS08635 SM00490 helicase superfamily c-terminal domain DK42_RS08645 SM01005 Alanine racemase, C-terminal domain DK42_RS08660 SM00957 SecA DEAD-like domain DK42_RS08660 SM00958 SecA preprotein cross-linking domain DK42_RS08685 SM00640 Glycosyl hydrolases family 32 DK42_RS08690 SM00354 helix_turn _helix lactose operon repressor DK42_RS08705 SM00841 Elongation factor P, C-terminal DK42_RS08705 SM01185 DK42_RS08705 DK42_RS08710 SM00382 ATPases associated with a variety of cellular activities DK42_RS08715 SM00382 ATPases associated with a variety of cellular activities DK42_RS08750 SM00347 helix_turn_helix multiple antibiotic resistance protein DK42_RS08750 SM00529 Helix-turn-helix diphteria tox regulatory element DK42_RS08775 SM00382 ATPases associated with a variety of cellular activities DK42_RS08805 SM00478 endonuclease III DK42_RS08810 SM00530 Helix-turn-helix XRE-family like proteins DK42_RS08820 SM00014 Acid phosphatase homologues DK42_RS08825 SM00463 Small MutS-related domain DK42_RS08825 SM00533 DNA-binding domain of DNA mismatch repair MUTS family DK42_RS08825 SM00534 ATPase domain of DNA mismatch repair MUTS family DK42_RS08850 SM00382 ATPases associated with a variety of cellular activities DK42_RS08915 SM00419 helix_turn_helix, cAMP Regulatory protein DK42_RS08920 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain DK42_RS08920 SM00940 X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal DK42_RS08935 SM00382 ATPases associated with a variety of cellular activities DK42_RS08940 SM00382 ATPases associated with a variety of cellular activities DK42_RS08980 SM00422 helix_turn_helix, mercury resistance DK42_RS08985 SM00479 DK42_RS08985 DK42_RS09035 SM00849 Metallo-beta-lactamase superfamily DK42_RS09045 SM01230 DK42_RS09045 DK42_RS09050 SM00422 helix_turn_helix, mercury resistance DK42_RS09070 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DK42_RS09075 SM00838 Elongation factor G C-terminus DK42_RS09075 SM00889 Elongation factor G, domain IV DK42_RS09105 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain DK42_RS09125 SM00650 Ribosomal RNA adenine dimethylases DK42_RS09135 SM00493 DK42_RS09135 DK42_RS09190 SM00387 Histidine kinase-like ATPases DK42_RS09190 SM00388 His Kinase A (phosphoacceptor) domain DK42_RS09195 SM00448 cheY-homologous receiver domain DK42_RS09195 SM00862 Transcriptional regulatory protein, C terminal DK42_RS09230 SM00530 Helix-turn-helix XRE-family like proteins DK42_RS09240 SM00889 Elongation factor G, domain IV DK42_RS09280 SM00530 Helix-turn-helix XRE-family like proteins DK42_RS09305 SM00382 ATPases associated with a variety of cellular activities DK42_RS09355 SM00354 helix_turn _helix lactose operon repressor DK42_RS09365 SM01007 Class II Aldolase and Adducin N-terminal domain DK42_RS09375 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family DK42_RS09410 SM00788 Adenylosuccinate synthetase DK42_RS09460 SM00382 ATPases associated with a variety of cellular activities DK42_RS09460 SM01086 C-terminal, D2-small domain, of ClpB protein DK42_RS09520 SM00530 Helix-turn-helix XRE-family like proteins DK42_RS09625 SM00836 DALR anticodon binding domain DK42_RS09625 SM01016 Arginyl tRNA synthetase N terminal dom DK42_RS09635 SM00533 DNA-binding domain of DNA mismatch repair MUTS family DK42_RS09635 SM00534 ATPase domain of DNA mismatch repair MUTS family DK42_RS09640 SM00357 Cold shock protein domain DK42_RS09645 SM00853 MutL C terminal dimerisation domain DK42_RS09645 SM01340 DK42_RS09645 DK42_RS09655 SM00278 Helix-hairpin-helix DNA-binding motif class 1 DK42_RS09665 SM00852 Probable molybdopterin binding domain DK42_RS09670 SM00382 ATPases associated with a variety of cellular activities DK42_RS09685 SM00732 Likely ribonuclease with RNase H fold. DK42_RS09755 SM00382 ATPases associated with a variety of cellular activities DK42_RS09760 SM00883 Chaperonin 10 Kd subunit DK42_RS09775 SM00345 helix_turn_helix gluconate operon transcriptional repressor DK42_RS09790 SM01133 DK42_RS09790 DK42_RS09825 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. DK42_RS09825 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. DK42_RS09860 SM00387 Histidine kinase-like ATPases DK42_RS09860 SM00388 His Kinase A (phosphoacceptor) domain DK42_RS09865 SM00448 cheY-homologous receiver domain DK42_RS09865 SM00862 Transcriptional regulatory protein, C terminal DK42_RS09925 SM00450 Rhodanese Homology Domain DK42_RS09945 SM00014 Acid phosphatase homologues DK42_RS09955 SM00530 Helix-turn-helix XRE-family like proteins DK42_RS09965 SM00382 ATPases associated with a variety of cellular activities DK42_RS10035 SM00382 ATPases associated with a variety of cellular activities DK42_RS10045 SM00530 Helix-turn-helix XRE-family like proteins DK42_RS10100 SM00382 ATPases associated with a variety of cellular activities DK42_RS10110 SM00448 cheY-homologous receiver domain DK42_RS10110 SM00862 Transcriptional regulatory protein, C terminal DK42_RS10115 SM00387 Histidine kinase-like ATPases DK42_RS10115 SM00388 His Kinase A (phosphoacceptor) domain DK42_RS10130 SM00448 cheY-homologous receiver domain DK42_RS10130 SM00850 LytTr DNA-binding domain DK42_RS10140 SM00382 ATPases associated with a variety of cellular activities DK42_RS10180 SM00342 helix_turn_helix, arabinose operon control protein DK42_RS10180 SM00448 cheY-homologous receiver domain DK42_RS10215 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. DK42_RS10215 SM00954 Region found in RelA / SpoT proteins DK42_RS10235 SM00420 helix_turn_helix, Deoxyribose operon repressor DK42_RS10235 SM01134 DK42_RS10235 DK42_RS10275 SM01133 DK42_RS10275 DK42_RS10290 SM00382 ATPases associated with a variety of cellular activities DK42_RS10295 SM00642 Alpha-amylase domain DK42_RS10305 SM00448 cheY-homologous receiver domain DK42_RS10320 SM00919 Malic enzyme, NAD binding domain DK42_RS10320 SM01274 DK42_RS10320 DK42_RS10330 SM01323 DK42_RS10330 DK42_RS10355 SM00047 Lysozyme subfamily 2 DK42_RS10360 SM00479 DK42_RS10360 DK42_RS10360 SM00481 DNA polymerase alpha chain like domain DK42_RS10365 SM00347 helix_turn_helix multiple antibiotic resistance protein DK42_RS10435 SM00354 helix_turn _helix lactose operon repressor DK42_RS10445 SM00100 Cyclic nucleotide-monophosphate binding domain DK42_RS10515 SM00530 Helix-turn-helix XRE-family like proteins DK42_RS10535 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor DK42_RS10595 SM00448 cheY-homologous receiver domain DK42_RS10595 SM00862 Transcriptional regulatory protein, C terminal DK42_RS10600 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DK42_RS10600 SM00387 Histidine kinase-like ATPases DK42_RS10600 SM00388 His Kinase A (phosphoacceptor) domain DK42_RS10625 SM00387 Histidine kinase-like ATPases DK42_RS10630 SM00448 cheY-homologous receiver domain DK42_RS10635 SM00382 ATPases associated with a variety of cellular activities DK42_RS10720 SM00942 Primase C terminal 1 (PriCT-1) DK42_RS10755 SM01040 BRO family, N-terminal domain DK42_RS10760 SM01040 BRO family, N-terminal domain DK42_RS10770 SM00530 Helix-turn-helix XRE-family like proteins DK42_RS10785 SM00363 S4 RNA-binding domain DK42_RS10785 SM01390 DK42_RS10785 DK42_RS10810 SM01228 DK42_RS10810 DK42_RS10845 SM00257 Lysin motif DK42_RS10855 SM00382 ATPases associated with a variety of cellular activities DK42_RS10860 SM00382 ATPases associated with a variety of cellular activities DK42_RS10905 SM00530 Helix-turn-helix XRE-family like proteins DK42_RS10910 SM00116 Domain in cystathionine beta-synthase and other proteins. DK42_RS10910 SM01240 DK42_RS10910 DK42_RS10920 SM00419 helix_turn_helix, cAMP Regulatory protein DK42_RS10925 SM00873 B3/4 domain DK42_RS10970 SM00382 ATPases associated with a variety of cellular activities DK42_RS11000 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. DK42_RS11005 SM00470 ParB-like nuclease domain