locus-tag	class	description
S9968_RS00060	COG1598	PFAM Uncharacterised protein family UPF0150
S9968_RS00215	COG3561	AntA/AntB antirepressor
S9968_RS00250	COG1396	sequence-specific DNA binding
S9968_RS00265	COG0582	viral genome integration into host DNA
S9968_RS00275	COG0335	large ribosomal subunit rRNA binding
S9968_RS00285	COG0038	chloride channel
S9968_RS00290	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
S9968_RS00290	COG1605	Chorismate mutase
S9968_RS00295	COG0716	FMN binding
S9968_RS00300	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
S9968_RS00305	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
S9968_RS00310	COG0254	rRNA binding
S9968_RS00335	COG1660	Displays ATPase and GTPase activities
S9968_RS00355	COG0017	Asparaginyl-tRNA synthetase
S9968_RS00360	COG0436	Aminotransferase
S9968_RS00365	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
S9968_RS00365	COG1199	ATP-dependent helicase activity
S9968_RS00385	COG2177	Part of the ABC transporter FtsEX involved in
S9968_RS00390	COG2884	Cell division ATP-binding protein ftsE
S9968_RS00400	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
S9968_RS00425	COG1078	dGTPase activity
S9968_RS00470	COG2755	lipolytic protein G-D-S-L family
S9968_RS00475	COG1307	EDD domain protein, DegV family
S9968_RS00480	COG0497	DNA recombination
S9968_RS00485	COG1438	arginine binding
S9968_RS00490	COG1189	Ribosomal RNA methyltransferase RrmJ FtsJ
S9968_RS00500	COG1722	exodeoxyribonuclease VII activity
S9968_RS00510	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
S9968_RS00520	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
S9968_RS00525	COG1126	abc transporter atp-binding protein
S9968_RS00530	COG0765	amino acid transport
S9968_RS00535	COG4703	Protein of unknown function (DUF1797)
S9968_RS00540	COG0542	response to heat
S9968_RS00545	COG0494	nUDIX hydrolase
S9968_RS00560	COG3599	regulation of cell shape
S9968_RS00565	COG2302	S4 RNA-binding domain
S9968_RS00570	COG0762	integral membrane protein
S9968_RS00580	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
S9968_RS00620	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
S9968_RS00625	COG1940	carbohydrate kinase activity
S9968_RS00640	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
S9968_RS00650	COG0183	Belongs to the thiolase family
S9968_RS00665	COG1268	BioY protein
S9968_RS00670	COG0512	Glutamine amidotransferase of anthranilate synthase
S9968_RS00675	COG1132	(ABC) transporter
S9968_RS00680	COG1132	(ABC) transporter
S9968_RS00695	COG4470	Protein conserved in bacteria
S9968_RS00705	COG3480	Lon protease (S16) C-terminal proteolytic domain
S9968_RS00720	COG0742	ribosomal rna small subunit methyltransferase
S9968_RS00735	COG2315	Protein conserved in bacteria
S9968_RS00740	COG3328	transposase activity
S9968_RS00750	COG0673	inositol 2-dehydrogenase activity
S9968_RS00765	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
S9968_RS00795	COG0582	viral genome integration into host DNA
S9968_RS00845	COG0656	L-ascorbic acid biosynthetic process
S9968_RS00850	COG1063	alcohol dehydrogenase
S9968_RS00855	COG0789	Transcriptional regulator
S9968_RS00865	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
S9968_RS00905	COG1216	Glycosyl transferase, family 2
S9968_RS00905	COG1442	glycosyl transferase family 8
S9968_RS00915	COG2153	protein acetylation
S9968_RS01000	COG1210	Utp--glucose-1-phosphate uridylyltransferase
S9968_RS01005	COG1744	ABC transporter substrate-binding protein PnrA-like
S9968_RS01010	COG0705	Rhomboid family
S9968_RS01010	COG0457	Tetratricopeptide repeat
S9968_RS01015	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
S9968_RS01020	COG0166	Belongs to the GPI family
S9968_RS01035	COG1234	tRNA 3'-trailer cleavage
S9968_RS01040	COG1268	BioY protein
S9968_RS01060	COG5002	protein histidine kinase activity
S9968_RS01080	COG1832	CoA-binding protein
S9968_RS01085	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
S9968_RS01085	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
S9968_RS01095	COG2860	membrane
S9968_RS01120	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
S9968_RS01135	COG2740	Nucleic-acid-binding protein implicated in transcription termination
S9968_RS01140	COG0195	Participates in both transcription termination and antitermination
S9968_RS01155	COG0220	tRNA (guanine-N7-)-methyltransferase activity
S9968_RS01165	COG4473	ABC transporter
S9968_RS01170	COG1131	(ABC) transporter
S9968_RS01185	COG0537	adenosine 5'-monophosphoramidase activity
S9968_RS01195	COG1316	TRANSCRIPTIONal
S9968_RS01205	COG0802	atpase or kinase
S9968_RS01210	COG2252	PERMEase
S9968_RS01225	COG0561	phosphatase activity
S9968_RS01235	COG3715	PTS system
S9968_RS01240	COG3716	PTS system mannose fructose sorbose family IID component
S9968_RS01255	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
S9968_RS01275	COG0439	Biotin carboxylase
S9968_RS01290	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
S9968_RS01295	COG1028	Short-chain dehydrogenase reductase Sdr
S9968_RS01300	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
S9968_RS01305	COG2070	2-Nitropropane dioxygenase
S9968_RS01315	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
S9968_RS01325	COG1024	Enoyl-CoA hydratase
S9968_RS01330	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
S9968_RS01335	COG0527	aspartate kinase activity
S9968_RS01370	COG1040	competence protein
S9968_RS01375	COG4098	Superfamily II DNA RNA helicase required for DNA uptake (late competence protein)
S9968_RS01380	COG1739	Uncharacterized protein family UPF0029
S9968_RS01400	COG1882	Formate acetyltransferase
S9968_RS01405	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
S9968_RS01415	COG1447	Phosphotransferase system cellobiose-specific component IIA
S9968_RS01425	COG1349	DNA-binding transcription factor activity
S9968_RS01430	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
S9968_RS01435	COG1098	S1 RNA binding domain
S9968_RS01445	COG2197	response regulator
S9968_RS01450	COG4585	Histidine kinase
S9968_RS01460	COG0515	serine threonine protein kinase
S9968_RS01460	COG2815	serine threonine protein kinase
S9968_RS01470	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
S9968_RS01470	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
S9968_RS01475	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
S9968_RS01480	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
S9968_RS01490	COG0194	GDP metabolic process
S9968_RS01505	COG4585	Histidine kinase
S9968_RS01515	COG1131	(ABC) transporter
S9968_RS01520	COG4372	Transposase
S9968_RS01520	COG1418	mRNA catabolic process
S9968_RS01525	COG1854	S-ribosylhomocysteine lyase activity
S9968_RS01535	COG0116	Belongs to the methyltransferase superfamily
S9968_RS01560	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
S9968_RS01565	COG3579	cysteine-type endopeptidase activity
S9968_RS01575	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
S9968_RS01580	COG0492	ferredoxin-NADP+ reductase activity
S9968_RS01590	COG1126	abc transporter atp-binding protein
S9968_RS01605	COG0513	Belongs to the DEAD box helicase family
S9968_RS01615	COG0768	penicillin binding
S9968_RS01635	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
S9968_RS01640	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
S9968_RS01640	COG1263	PTS System
S9968_RS01640	COG2190	(PTS) system
S9968_RS01650	COG1131	(ABC) transporter
S9968_RS01670	COG0446	pyridine nucleotide-disulphide oxidoreductase
S9968_RS01675	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
S9968_RS01715	COG1755	Isoprenylcysteine carboxyl methyltransferase
S9968_RS01730	COG1695	Transcriptional regulator
S9968_RS01780	COG0519	Catalyzes the synthesis of GMP from XMP
S9968_RS01850	COG0582	viral genome integration into host DNA
S9968_RS01945	COG1732	Glycine betaine
S9968_RS01955	COG2814	Major facilitator Superfamily
S9968_RS01960	COG1396	sequence-specific DNA binding
S9968_RS02050	COG4974	Belongs to the 'phage' integrase family
S9968_RS02065	COG1121	(ABC) transporter
S9968_RS02130	COG0582	viral genome integration into host DNA
S9968_RS02140	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
S9968_RS02160	COG1939	Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
S9968_RS02175	COG1045	serine acetyltransferase
S9968_RS02195	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
S9968_RS02200	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
S9968_RS02205	COG3959	Transketolase, thiamine diphosphate binding domain
S9968_RS02220	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
S9968_RS02225	COG0366	Alpha amylase catalytic
S9968_RS02230	COG1263	PTS System
S9968_RS02230	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
S9968_RS02240	COG1122	ATPase activity
S9968_RS02245	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
S9968_RS02250	COG0601	transmembrane transport
S9968_RS02260	COG1346	cytolysis
S9968_RS02280	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
S9968_RS02295	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
S9968_RS02300	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
S9968_RS02315	COG1363	Peptidase, m42
S9968_RS02320	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
S9968_RS02365	COG1459	type II secretion system
S9968_RS02390	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
S9968_RS02390	COG4499	WXG100 protein secretion system (Wss), protein YukC
S9968_RS02405	COG1108	ABC-type Mn2 Zn2 transport systems permease components
S9968_RS02410	COG1121	(ABC) transporter
S9968_RS02450	COG4608	Belongs to the ABC transporter superfamily
S9968_RS02455	COG0444	Belongs to the ABC transporter superfamily
S9968_RS02460	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
S9968_RS02465	COG0601	transmembrane transport
S9968_RS02470	COG4166	transmembrane transport
S9968_RS02475	COG1686	Belongs to the peptidase S11 family
S9968_RS02480	COG1686	Belongs to the peptidase S11 family
S9968_RS02485	COG0719	Fe-S assembly protein
S9968_RS02495	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
S9968_RS02500	COG0719	Fe-S assembly protein
S9968_RS02510	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
S9968_RS02530	COG0765	amino acid transport
S9968_RS02535	COG1126	abc transporter atp-binding protein
S9968_RS02555	COG1461	Dihydroxyacetone kinase
S9968_RS02575	COG0191	fructose-bisphosphate aldolase activity
S9968_RS02590	COG5002	protein histidine kinase activity
S9968_RS02595	COG0745	RESPONSE REGULATOR receiver
S9968_RS02600	COG1136	(ABC) transporter
S9968_RS02605	COG0577	efflux transmembrane transporter activity
S9968_RS02610	COG1609	Transcriptional regulator
S9968_RS02615	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
S9968_RS02630	COG1172	Belongs to the binding-protein-dependent transport system permease family
S9968_RS02635	COG1879	ABC-type sugar transport system periplasmic component
S9968_RS02645	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
S9968_RS02660	COG0756	dUTP diphosphatase activity
S9968_RS02690	COG0668	transmembrane transport
S9968_RS02700	COG4720	Psort location CytoplasmicMembrane, score
S9968_RS02705	COG0351	phosphomethylpyrimidine kinase
S9968_RS02715	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
S9968_RS02725	COG0443	Heat shock 70 kDa protein
S9968_RS02740	COG1705	Flagellar rod assembly protein muramidase FlgJ
S9968_RS02885	COG0202	RNA polymerase activity
S9968_RS02895	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
S9968_RS02910	COG0563	adenylate kinase activity
S9968_RS02915	COG0201	protein transport
S9968_RS03025	COG0534	Mate efflux family protein
S9968_RS03035	COG1064	alcohol dehydrogenase
S9968_RS03040	COG1012	belongs to the aldehyde dehydrogenase family
S9968_RS03040	COG1454	alcohol dehydrogenase
S9968_RS03045	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
S9968_RS03045	COG2755	lipolytic protein G-D-S-L family
S9968_RS03055	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
S9968_RS03070	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
S9968_RS03085	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
S9968_RS03100	COG3458	cephalosporin-C deacetylase activity
S9968_RS03110	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
S9968_RS03125	COG0395	ABC-type sugar transport system, permease component
S9968_RS03130	COG1175	transmembrane transport
S9968_RS03140	COG3010	Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P)
S9968_RS03155	COG0138	bifunctional purine biosynthesis protein purh
S9968_RS03165	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
S9968_RS03180	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
S9968_RS03190	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
S9968_RS03195	COG0416	fatty acid biosynthetic process
S9968_RS03210	COG0436	Aminotransferase
S9968_RS03395	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
S9968_RS03425	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
S9968_RS03430	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
S9968_RS03440	COG0012	GTP binding
S9968_RS03455	COG1597	lipid kinase activity
S9968_RS03460	COG0592	DNA-directed DNA polymerase activity
S9968_RS03470	COG1475	DNA binding
S9968_RS03475	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
S9968_RS03480	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
S9968_RS03500	COG4485	Bacterial membrane protein, YfhO
S9968_RS03505	COG0488	(ABC) transporter
S9968_RS03510	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
S9968_RS03535	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
S9968_RS03540	COG0454	-acetyltransferase
S9968_RS03555	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
S9968_RS03565	COG0517	IMP dehydrogenase activity
S9968_RS03565	COG0516	GMP reductase activity
S9968_RS03585	COG2501	S4 domain
S9968_RS03590	COG0612	Peptidase, M16
S9968_RS03595	COG0612	Peptidase, M16
S9968_RS03600	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
S9968_RS03625	COG0741	lytic transglycosylase activity
S9968_RS03630	COG1760	l-serine dehydratase
S9968_RS03635	COG1760	l-serine dehydratase
S9968_RS03640	COG0482	sulfurtransferase activity
S9968_RS03645	COG2095	MarC family integral membrane protein
S9968_RS03650	COG0445	tRNA wobble uridine modification
S9968_RS03665	COG0305	Participates in initiation and elongation during chromosome replication
S9968_RS03695	COG3759	membrane
S9968_RS03705	COG0392	lysyltransferase activity
S9968_RS03705	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
S9968_RS03710	COG1174	glycine betaine transport
S9968_RS03715	COG1125	glycine betaine transport
S9968_RS03715	COG0517	IMP dehydrogenase activity
S9968_RS03720	COG0784	Response regulator, receiver
S9968_RS03725	COG3852	Histidine kinase
S9968_RS03730	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
S9968_RS03740	COG1288	antiporter activity
S9968_RS03745	COG5002	protein histidine kinase activity
S9968_RS03750	COG0745	RESPONSE REGULATOR receiver
S9968_RS03760	COG0267	Belongs to the bacterial ribosomal protein bL33 family
S9968_RS03770	COG0124	histidyl-tRNA synthetase
S9968_RS03780	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
S9968_RS03785	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
S9968_RS03815	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
S9968_RS03830	COG2818	Glycosylase
S9968_RS03840	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
S9968_RS03845	COG1393	Belongs to the ArsC family
S9968_RS03855	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
S9968_RS03870	COG1328	CTP reductase activity
S9968_RS03890	COG0602	queuosine metabolic process
S9968_RS03900	COG2514	catechol 2,3-dioxygenase activity
S9968_RS03905	COG0561	phosphatase activity
S9968_RS03915	COG4120	Belongs to the binding-protein-dependent transport system permease family
S9968_RS03920	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
S9968_RS03920	COG1116	anion transmembrane transporter activity
S9968_RS03925	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
S9968_RS03945	COG2820	Catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1- phosphate. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis
S9968_RS03950	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
S9968_RS03970	COG0564	pseudouridine synthase activity
S9968_RS03975	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
S9968_RS04000	COG1442	glycosyl transferase family 8
S9968_RS04005	COG1442	glycosyl transferase family 8
S9968_RS04010	COG4667	esterase of the alpha-beta hydrolase superfamily
S9968_RS04015	COG2814	Major facilitator Superfamily
S9968_RS04020	COG0495	leucyl-tRNA aminoacylation
S9968_RS04030	COG2770	Histidine kinase
S9968_RS04030	COG2205	protein histidine kinase activity
S9968_RS04035	COG0745	RESPONSE REGULATOR receiver
S9968_RS04045	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
S9968_RS04055	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
S9968_RS04060	COG0646	methionine synthase
S9968_RS04060	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
S9968_RS04070	COG0371	Dehydrogenase
S9968_RS04100	COG1694	Mazg nucleotide pyrophosphohydrolase
S9968_RS04110	COG1396	sequence-specific DNA binding
S9968_RS04120	COG1131	(ABC) transporter
S9968_RS04160	COG1131	(ABC) transporter
S9968_RS04170	COG1914	H( )-stimulated, divalent metal cation uptake system
S9968_RS04205	COG1674	ftsk spoiiie
S9968_RS04250	COG4115	mRNA cleavage
S9968_RS04270	COG0433	COG0433 Predicted ATPase
S9968_RS04315	COG0582	viral genome integration into host DNA
S9968_RS04335	COG3843	relaxase mobilization nuclease domain protein
S9968_RS04460	COG3620	sequence-specific DNA binding
S9968_RS04510	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
S9968_RS04515	COG0456	acetyltransferase
S9968_RS04535	COG0789	Transcriptional regulator
S9968_RS04550	COG1385	rRNA (uridine-N3-)-methyltransferase activity
S9968_RS04565	COG0573	inorganic phosphate transmembrane transporter activity
S9968_RS04570	COG0581	inorganic phosphate transmembrane transporter activity
S9968_RS04575	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
S9968_RS04585	COG0745	RESPONSE REGULATOR receiver
S9968_RS04590	COG5002	protein histidine kinase activity
S9968_RS04595	COG1263	PTS System
S9968_RS04595	COG2190	(PTS) system
S9968_RS04595	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
S9968_RS04605	COG3279	Response regulator of the LytR AlgR family
S9968_RS04615	COG1131	(ABC) transporter
S9968_RS04640	COG3715	PTS system
S9968_RS04645	COG3716	PTS system mannose fructose sorbose family IID component
S9968_RS04650	COG2972	Histidine kinase
S9968_RS04655	COG4753	response regulator
S9968_RS04655	COG2207	Transcriptional regulator
S9968_RS04670	COG1363	Peptidase, m42
S9968_RS04680	COG0737	Belongs to the 5'-nucleotidase family
S9968_RS04690	COG1490	D-aminoacyl-tRNA deacylase activity
S9968_RS04760	COG3842	ATPase activity
S9968_RS04770	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
S9968_RS04775	COG4565	transcriptional regulatory protein
S9968_RS04780	COG3290	protein histidine kinase activity
S9968_RS04785	COG3493	citrate carrier protein
S9968_RS04800	COG1862	Preprotein translocase
S9968_RS04805	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
S9968_RS04810	COG4589	Belongs to the CDS family
S9968_RS04825	COG1705	Flagellar rod assembly protein muramidase FlgJ
S9968_RS04825	COG1388	LysM domain
S9968_RS04830	COG2176	DNA-directed DNA polymerase activity
S9968_RS04865	COG1028	Short-chain dehydrogenase reductase Sdr
S9968_RS04875	COG4225	unsaturated rhamnogalacturonyl hydrolase activity
S9968_RS04880	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
S9968_RS04885	COG3715	PTS system
S9968_RS04890	COG3716	PTS system mannose fructose sorbose family IID component
S9968_RS04900	COG1609	Transcriptional regulator
S9968_RS04925	COG3590	peptidase
S9968_RS04930	COG1619	proteins homologs of microcin C7 resistance protein MccF
S9968_RS04940	COG0025	NhaP-type Na H and K H
S9968_RS04955	COG0450	alkyl hydroperoxide reductase
S9968_RS04965	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
S9968_RS04975	COG4463	regulation of RNA biosynthetic process
S9968_RS04980	COG0542	response to heat
S9968_RS04990	COG1428	Deoxynucleoside kinase
S9968_RS04995	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
S9968_RS05000	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
S9968_RS05030	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
S9968_RS05080	COG1609	Transcriptional regulator
S9968_RS05090	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
S9968_RS05095	COG3775	system Galactitol-specific IIC component
S9968_RS05105	COG1070	Carbohydrate kinase
S9968_RS05125	COG3957	D-xylulose 5-phosphate D-fructose 6-phosphate phosphoketolase
S9968_RS05130	COG4175	Glycine betaine
S9968_RS05130	COG3448	diguanylate cyclase activity
S9968_RS05155	COG0745	RESPONSE REGULATOR receiver
S9968_RS05175	COG1696	Membrane protein involved in D-alanine export
S9968_RS05180	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
S9968_RS05185	COG3966	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
S9968_RS05210	COG0084	hydrolase, TatD family'
S9968_RS05260	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
S9968_RS05285	COG2503	HAD superfamily, subfamily IIIB (Acid phosphatase)
S9968_RS05300	COG0789	Transcriptional regulator
S9968_RS05305	COG0174	glutamine synthetase
S9968_RS05310	COG3942	CHAP domain
S9968_RS05325	COG1214	PFAM Peptidase M22, glycoprotease
S9968_RS05330	COG0456	acetyltransferase
S9968_RS05355	COG2081	HI0933 family
S9968_RS05370	COG0789	Transcriptional regulator
S9968_RS05375	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
S9968_RS05380	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
S9968_RS05395	COG1252	NADH dehydrogenase
S9968_RS05400	COG1271	oxidase subunit
S9968_RS05405	COG1294	oxidase, subunit
S9968_RS05410	COG4988	ABC transporter
S9968_RS05415	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
S9968_RS05420	COG0142	geranyltranstransferase activity
S9968_RS05435	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
S9968_RS05440	COG2814	Major facilitator Superfamily
S9968_RS05450	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
S9968_RS05465	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
S9968_RS05470	COG3576	pyridoxamine 5-phosphate
S9968_RS05475	COG1882	Formate acetyltransferase
S9968_RS05490	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
S9968_RS05495	COG0681	Belongs to the peptidase S26 family
S9968_RS05525	COG3118	belongs to the thioredoxin family
S9968_RS05535	COG1194	a g-specific adenine glycosylase
S9968_RS05540	COG0360	Binds together with S18 to 16S ribosomal RNA
S9968_RS05545	COG0629	single-stranded DNA binding
S9968_RS05570	COG2814	Major facilitator Superfamily
S9968_RS05585	COG0006	proline dipeptidase activity
S9968_RS05590	COG2131	deaminase
S9968_RS05620	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
S9968_RS05630	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
S9968_RS05635	COG1609	Transcriptional regulator
S9968_RS05640	COG1621	beta-fructofuranosidase activity
S9968_RS05645	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
S9968_RS05645	COG2190	(PTS) system
S9968_RS05645	COG1263	PTS System
S9968_RS05650	COG1940	carbohydrate kinase activity
S9968_RS05655	COG1482	cell wall glycoprotein biosynthetic process
S9968_RS05665	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
S9968_RS05670	COG0736	holo-[acyl-carrier-protein] synthase activity
S9968_RS05680	COG1705	Flagellar rod assembly protein muramidase FlgJ
S9968_RS05680	COG3942	CHAP domain
S9968_RS05685	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
S9968_RS05690	COG4989	oxidoreductase activity
S9968_RS05700	COG0252	asparaginase activity
S9968_RS05705	COG0561	phosphatase activity
S9968_RS05710	COG0589	response to stress
S9968_RS05715	COG0436	Aminotransferase
S9968_RS05720	COG4465	DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor
S9968_RS05725	COG1335	isochorismatase
S9968_RS05735	COG0517	IMP dehydrogenase activity
S9968_RS05745	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
S9968_RS05745	COG0574	Belongs to the PEP-utilizing enzyme family
S9968_RS05770	COG2179	HAD superfamily (subfamily IIIA) phosphatase, TIGR01668
S9968_RS05775	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
S9968_RS05780	COG1534	Rna-binding protein
S9968_RS05785	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
S9968_RS05790	COG1713	HD superfamily hydrolase involved in NAD metabolism
S9968_RS05800	COG0799	negative regulation of ribosome biogenesis
S9968_RS05805	COG2226	methyltransferase
S9968_RS05820	COG0789	Transcriptional regulator
S9968_RS05830	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
S9968_RS05835	COG3412	dihydroxyacetone kinase, phosphotransfer subunit
S9968_RS05840	COG1461	Dihydroxyacetone kinase
S9968_RS05845	COG2376	Dihydroxyacetone kinase
S9968_RS05850	COG1309	transcriptional regulator
S9968_RS05855	COG2376	Dihydroxyacetone kinase
S9968_RS05860	COG0217	transcriptional regulatory protein
S9968_RS05865	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
S9968_RS05870	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
S9968_RS05895	COG1063	alcohol dehydrogenase
S9968_RS05900	COG1114	Component of the transport system for branched-chain amino acids
S9968_RS05925	COG0569	domain protein
S9968_RS05930	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
S9968_RS05940	COG1704	LemA family
S9968_RS05955	COG0745	RESPONSE REGULATOR receiver
S9968_RS05960	COG5002	protein histidine kinase activity
S9968_RS05975	COG1484	DNA-dependent DNA replication
S9968_RS06005	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
S9968_RS06020	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
S9968_RS06025	COG0765	amino acid transport
S9968_RS06035	COG1254	Belongs to the acylphosphatase family
S9968_RS06040	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
S9968_RS06055	COG1827	regulation of RNA biosynthetic process
S9968_RS06105	COG1187	pseudouridine synthase activity
S9968_RS06115	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
S9968_RS06120	COG0569	domain protein
S9968_RS06125	COG0531	amino acid
S9968_RS06135	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
S9968_RS06140	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
S9968_RS06160	COG0559	Belongs to the binding-protein-dependent transport system permease family
S9968_RS06180	COG0517	IMP dehydrogenase activity
S9968_RS06195	COG0470	DNA polymerase III
S9968_RS06225	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
S9968_RS06230	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
S9968_RS06235	COG1393	Belongs to the ArsC family
S9968_RS06240	COG0708	Exodeoxyribonuclease III
S9968_RS06250	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
S9968_RS06265	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
S9968_RS06265	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
S9968_RS06270	COG1114	Component of the transport system for branched-chain amino acids
S9968_RS06325	COG1028	Short-chain dehydrogenase reductase Sdr
S9968_RS06340	COG0673	inositol 2-dehydrogenase activity
S9968_RS06370	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
S9968_RS06395	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
S9968_RS06405	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
S9968_RS06420	COG0583	DNA-binding transcription factor activity
S9968_RS06425	COG1473	amidohydrolase
S9968_RS06445	COG0081	regulation of translation
S9968_RS06450	COG0747	negative chemotaxis
S9968_RS06455	COG0601	transmembrane transport
S9968_RS06460	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
S9968_RS06465	COG0444	Belongs to the ABC transporter superfamily
S9968_RS06480	COG0233	cytoplasmic translational termination
S9968_RS06505	COG1702	phosphate starvation-inducible protein PhoH
S9968_RS06525	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
S9968_RS06530	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
S9968_RS06580	COG1396	sequence-specific DNA binding
S9968_RS06585	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
S9968_RS06595	COG1131	(ABC) transporter
S9968_RS06605	COG2814	Major facilitator Superfamily
S9968_RS06620	COG0557	exoribonuclease II activity
S9968_RS06625	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
S9968_RS06630	COG1113	amino acid transport
S9968_RS06635	COG0463	Glycosyl transferase, family 2
S9968_RS06640	COG0346	lactoylglutathione lyase activity
S9968_RS06645	COG0778	Nitroreductase
S9968_RS06650	COG0656	L-ascorbic acid biosynthetic process
S9968_RS06655	COG1187	pseudouridine synthase activity
S9968_RS06660	COG0154	amidase activity
S9968_RS06670	COG2309	aminopeptidase activity
S9968_RS06695	COG1126	abc transporter atp-binding protein
S9968_RS06700	COG0765	amino acid transport
S9968_RS06735	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
S9968_RS06825	COG1136	(ABC) transporter
S9968_RS06840	COG5002	protein histidine kinase activity
S9968_RS06860	COG0772	Belongs to the SEDS family
S9968_RS06880	COG0560	Phosphoserine phosphatase
S9968_RS06895	COG5433	transposase activity
S9968_RS06900	COG0148	phosphopyruvate hydratase activity
S9968_RS06920	COG1316	TRANSCRIPTIONal
S9968_RS06960	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
S9968_RS06960	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
S9968_RS07010	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
S9968_RS07070	COG4695	Portal protein
S9968_RS07075	COG0740	serine-type endopeptidase activity
S9968_RS07150	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
S9968_RS07175	COG3700	Belongs to the class B bacterial acid phosphatase family
S9968_RS07265	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
S9968_RS07270	COG4555	ABC transporter
S9968_RS07295	COG1028	Short-chain dehydrogenase reductase Sdr
S9968_RS07300	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
S9968_RS07305	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
S9968_RS07325	COG0404	The glycine cleavage system catalyzes the degradation of glycine
S9968_RS07330	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
S9968_RS07350	COG3087	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
S9968_RS07350	COG3064	Membrane
S9968_RS07365	COG3590	peptidase
S9968_RS07370	COG3590	peptidase
S9968_RS07415	COG1136	(ABC) transporter
S9968_RS07430	COG0586	Pfam SNARE associated Golgi protein
S9968_RS07435	COG4619	ABC transporter
S9968_RS07440	COG0390	transport system, permease component
S9968_RS07450	COG0583	DNA-binding transcription factor activity
S9968_RS07460	COG5433	transposase activity
S9968_RS07475	COG2211	Major facilitator Superfamily
S9968_RS07485	COG3250	beta-galactosidase activity
S9968_RS07490	COG2186	Transcriptional regulator
S9968_RS07495	COG0800	Aldolase
S9968_RS07510	COG1028	Short-chain dehydrogenase reductase Sdr
S9968_RS07530	COG1609	Transcriptional regulator
S9968_RS07545	COG0438	transferase activity, transferring glycosyl groups
S9968_RS07570	COG0765	amino acid transport
S9968_RS07575	COG0765	amino acid transport
S9968_RS07580	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
S9968_RS07585	COG1126	abc transporter atp-binding protein
S9968_RS07590	COG0745	RESPONSE REGULATOR receiver
S9968_RS07595	COG5002	protein histidine kinase activity
S9968_RS07600	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
S9968_RS07605	COG2832	Protein of unknown function (DUF454)
S9968_RS07615	COG1196	nuclear chromosome segregation
S9968_RS07620	COG0561	phosphatase activity
S9968_RS07625	COG0561	phosphatase activity
S9968_RS07630	COG0552	protein localization to endoplasmic reticulum
S9968_RS07635	COG3689	TIGRFAM TIGR03943 family protein
S9968_RS07640	COG0701	Predicted permease
S9968_RS07655	COG2183	response to ionizing radiation
S9968_RS07660	COG3091	SprT-like family
S9968_RS07665	COG1983	PspC domain protein
S9968_RS07705	COG4443	Transcriptional Coactivator p15 (PC4)
S9968_RS07715	COG1914	H( )-stimulated, divalent metal cation uptake system
S9968_RS07730	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
S9968_RS07730	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
S9968_RS07755	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
S9968_RS07780	COG1164	Oligoendopeptidase f
S9968_RS07790	COG0772	Belongs to the SEDS family
S9968_RS07810	COG0768	penicillin binding
S9968_RS07825	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
S9968_RS07830	COG2223	nitrite transmembrane transporter activity
S9968_RS07855	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
S9968_RS07860	COG2011	ABC-type metal ion transport system permease component
S9968_RS07865	COG1464	Belongs to the NlpA lipoprotein family
S9968_RS07870	COG0513	Belongs to the DEAD box helicase family
S9968_RS07880	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
S9968_RS07885	COG0204	Acyl-transferase
S9968_RS07890	COG1555	photosystem II stabilization
S9968_RS07890	COG1596	polysaccharide export
S9968_RS07895	COG0658	competence protein
S9968_RS07895	COG2333	competence protein COMEC
S9968_RS07900	COG0561	phosphatase activity
S9968_RS07905	COG1609	Transcriptional regulator
S9968_RS07910	COG0657	acetylesterase activity
S9968_RS07915	COG2226	methyltransferase
S9968_RS07925	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
S9968_RS07930	COG3711	transcriptional antiterminator
S9968_RS07935	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
S9968_RS07935	COG1263	PTS System
S9968_RS07935	COG2190	(PTS) system
S9968_RS07945	COG3835	regulator
S9968_RS07950	COG1929	Belongs to the glycerate kinase type-1 family
S9968_RS07955	COG2610	gluconate transmembrane transporter activity
S9968_RS07965	COG1846	Transcriptional regulator
S9968_RS07980	COG0363	glucosamine-6-phosphate deaminase activity
S9968_RS07985	COG0435	Glutathione S-transferase
S9968_RS07990	COG1187	pseudouridine synthase activity
S9968_RS08010	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
S9968_RS08015	COG4122	O-methyltransferase activity
S9968_RS08025	COG4894	glucomannan catabolic process
S9968_RS08040	COG1442	glycosyl transferase family 8
S9968_RS08055	COG1476	TRANSCRIPTIONal
S9968_RS08070	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
S9968_RS08075	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
S9968_RS08080	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
S9968_RS08095	COG1012	belongs to the aldehyde dehydrogenase family
S9968_RS08100	COG0726	polysaccharide deacetylase
S9968_RS08115	COG1956	GAF domain-containing protein
S9968_RS08120	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
S9968_RS08130	COG1654	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon
S9968_RS08130	COG0340	biotin-[acetyl-CoA-carboxylase] ligase activity
S9968_RS08160	COG4721	ABC-type cobalt transport system, permease component
S9968_RS08165	COG1122	ATPase activity
S9968_RS08175	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
S9968_RS08205	COG4109	DRTGG domain
S9968_RS08210	COG0024	Methionine aminopeptidase
S9968_RS08220	COG2246	polysaccharide biosynthetic process
S9968_RS08225	COG4708	membrane
S9968_RS08235	COG1597	lipid kinase activity
S9968_RS08240	COG1523	belongs to the glycosyl hydrolase 13 family
S9968_RS08255	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
S9968_RS08340	COG2321	neutral zinc metallopeptidase
S9968_RS08365	COG0488	(ABC) transporter
S9968_RS08370	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
S9968_RS08375	COG0508	dehydrogenase complex catalyzes the overall conversion of
S9968_RS08375	COG0022	dehydrogenase e1 component
S9968_RS08380	COG0508	dehydrogenase complex catalyzes the overall conversion of
S9968_RS08390	COG0095	Lipoate-protein ligase
S9968_RS08395	COG3442	glutamine amidotransferase
S9968_RS08400	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
S9968_RS08405	COG1624	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
S9968_RS08430	COG0635	Involved in the biosynthesis of porphyrin-containing compound
S9968_RS08440	COG0647	UMP catabolic process
S9968_RS08450	COG3513	CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). In type II CRISPR systems correct processing of pre-crRNA requires a trans-encoded small RNA (tracrRNA), endogenous ribonuclease 3 (rnc) and this protein. The tracrRNA serves as a guide for ribonuclease 3-aided processing of pre-crRNA. Subsequently Cas9 crRNA tracrRNA endonucleolytically cleaves linear or circular dsDNA target complementary to the spacer
S9968_RS08455	COG1518	maintenance of DNA repeat elements
S9968_RS08460	COG3512	CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
S9968_RS08475	COG0481	GTPase activity
S9968_RS08485	COG5433	transposase activity
S9968_RS08495	COG1418	mRNA catabolic process
S9968_RS08500	COG0456	acetyltransferase
S9968_RS08510	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
S9968_RS08580	COG0741	lytic transglycosylase activity
S9968_RS08580	COG0791	NLP P60 protein
S9968_RS08610	COG2946	Replication initiation factor
S9968_RS08620	COG1674	ftsk spoiiie
S9968_RS08640	COG1131	(ABC) transporter
S9968_RS08645	COG1725	Transcriptional regulator
S9968_RS08655	COG0205	6-phosphofructokinase activity
S9968_RS08660	COG0469	pyruvate kinase activity
S9968_RS08675	COG5433	transposase activity
S9968_RS08680	COG2824	Alkylphosphonate utilization operon protein PhnA
S9968_RS08685	COG0765	amino acid transport
S9968_RS08690	COG1126	abc transporter atp-binding protein
S9968_RS08705	COG1072	(Pantothenic acid kinase))
S9968_RS08710	COG2813	Specifically methylates the guanine in position
S9968_RS08720	COG1744	ABC transporter substrate-binding protein PnrA-like
S9968_RS08755	COG3764	Sortase (surface protein transpeptidase)
S9968_RS08760	COG0346	lactoylglutathione lyase activity
S9968_RS08785	COG2188	Transcriptional regulator
S9968_RS08800	COG1464	Belongs to the NlpA lipoprotein family
S9968_RS08815	COG1136	(ABC) transporter
S9968_RS08825	COG0745	RESPONSE REGULATOR receiver
S9968_RS08830	COG5002	protein histidine kinase activity
S9968_RS08835	COG4974	Belongs to the 'phage' integrase family
S9968_RS08840	COG4166	transmembrane transport
S9968_RS08855	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
S9968_RS08860	COG2739	Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
S9968_RS08865	COG5002	protein histidine kinase activity
S9968_RS08870	COG0745	RESPONSE REGULATOR receiver
S9968_RS08880	COG0704	Plays a role in the regulation of phosphate uptake
S9968_RS08885	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
S9968_RS08890	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
S9968_RS08895	COG0581	inorganic phosphate transmembrane transporter activity
S9968_RS08900	COG0573	inorganic phosphate transmembrane transporter activity
S9968_RS08910	COG3270	Specifically methylates the cytosine at position 1407 (m5C1407) of 16S rRNA
S9968_RS08910	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
S9968_RS08915	COG0483	inositol monophosphate 1-phosphatase activity
S9968_RS08930	COG0196	riboflavin kinase activity
S9968_RS08935	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
S9968_RS08965	COG1136	(ABC) transporter
S9968_RS08970	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
S9968_RS08975	COG0758	DNA mediated transformation
S9968_RS08980	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
S9968_RS08985	COG4604	ABC transporter, ATP-binding protein
S9968_RS08990	COG4605	iron ion homeostasis
S9968_RS08995	COG4606	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
S9968_RS09000	COG0110	maltose O-acetyltransferase activity
S9968_RS09010	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
S9968_RS09015	COG1376	ErfK ybiS ycfS ynhG family protein
S9968_RS09020	COG1966	Carbon starvation protein
S9968_RS09025	COG3279	Response regulator of the LytR AlgR family
S9968_RS09030	COG3275	phosphorelay sensor kinase activity
S9968_RS09080	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
S9968_RS09085	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
S9968_RS09100	COG0488	(ABC) transporter
S9968_RS09110	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
S9968_RS09120	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
S9968_RS09160	COG0095	Lipoate-protein ligase
S9968_RS09170	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
S9968_RS09175	COG4684	Psort location CytoplasmicMembrane, score
S9968_RS09180	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
S9968_RS09195	COG1132	(ABC) transporter
S9968_RS09225	COG2890	protein-(glutamine-N5) methyltransferase activity
S9968_RS09240	COG1942	4-Oxalocrotonate Tautomerase
S9968_RS09255	COG1053	succinate dehydrogenase
S9968_RS09255	COG3976	FMN-binding domain protein
S9968_RS09255	COG0431	NADPH-dependent FMN reductase
S9968_RS09265	COG2233	PERMEase
S9968_RS09280	COG0477	Major facilitator Superfamily
S9968_RS09295	COG4221	oxidoreductase activity
S9968_RS09300	COG0280	phosphate acetyltransferase
S9968_RS09305	COG0564	pseudouridine synthase activity
S9968_RS09315	COG2357	RelA SpoT domain protein
S9968_RS09330	COG1104	cysteine desulfurase activity
S9968_RS09350	COG0628	permease
S9968_RS09365	COG0561	phosphatase activity
S9968_RS09375	COG0038	chloride channel
S9968_RS09385	COG1177	transmembrane transport
S9968_RS09390	COG1176	ABC-type spermidine putrescine transport system, permease component I
S9968_RS09400	COG0812	UDP-N-acetylmuramate dehydrogenase activity
S9968_RS09405	COG5433	transposase activity
S9968_RS09410	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
S9968_RS09430	COG0285	dihydrofolate synthase activity
S9968_RS09435	COG2962	Rard protein
S9968_RS09450	COG0726	polysaccharide deacetylase
S9968_RS09455	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
S9968_RS09460	COG1012	belongs to the aldehyde dehydrogenase family
S9968_RS09560	COG1115	amino acid carrier protein
S9968_RS09565	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
S9968_RS09575	COG1346	cytolysis
S9968_RS09590	COG0539	negative regulation of cytoplasmic translation
S9968_RS09610	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
S9968_RS09620	COG0187	DNA topoisomerase II activity
S9968_RS09625	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
S9968_RS09630	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
S9968_RS09640	COG2755	lipolytic protein G-D-S-L family
S9968_RS09640	COG1083	cytidylyl-transferase
S9968_RS09655	COG2089	acid synthase
S9968_RS09670	COG1216	Glycosyl transferase, family 2
S9968_RS09670	COG1442	glycosyl transferase family 8
S9968_RS09675	COG1442	glycosyl transferase family 8
S9968_RS09675	COG1216	Glycosyl transferase, family 2
S9968_RS09690	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
S9968_RS09695	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
S9968_RS09715	COG1316	TRANSCRIPTIONal
S9968_RS09740	COG0005	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
S9968_RS09775	COG5433	transposase activity
S9968_RS09780	COG3842	ATPase activity
S9968_RS09795	COG1293	RNA-binding protein homologous to eukaryotic snRNP
S9968_RS09800	COG3527	Alpha-acetolactate decarboxylase
S9968_RS09805	COG0028	Belongs to the TPP enzyme family
S9968_RS09810	COG0457	Tetratricopeptide repeat
S9968_RS09815	COG0628	permease
S9968_RS09825	COG1051	belongs to the nudix hydrolase family
S9968_RS09835	COG5433	transposase activity
S9968_RS09845	COG1088	dTDP-glucose 4,6-dehydratase activity
S9968_RS09850	COG0135	phosphoribosylanthranilate isomerase activity
S9968_RS09860	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
S9968_RS09865	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
S9968_RS09875	COG2384	SAM-dependent methyltransferase
S9968_RS09890	COG5433	transposase activity
S9968_RS09900	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
S9968_RS09900	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
S9968_RS09905	COG0300	oxidoreductase activity
S9968_RS09940	COG1523	belongs to the glycosyl hydrolase 13 family
S9968_RS09950	COG1573	uracil-dna glycosylase
S9968_RS09955	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
S9968_RS09980	COG0534	Mate efflux family protein
S9968_RS10020	COG0803	Belongs to the bacterial solute-binding protein 9 family
S9968_RS10045	COG2176	DNA-directed DNA polymerase activity
S9968_RS10055	COG4974	Belongs to the 'phage' integrase family
S9968_RS10065	COG1396	sequence-specific DNA binding
S9968_RS10070	COG3843	relaxase mobilization nuclease domain protein
S9968_RS10115	COG2217	Heavy metal translocating P-type atpase
S9968_RS10120	COG2217	Heavy metal translocating P-type atpase
S9968_RS10160	COG1388	LysM domain
S9968_RS10160	COG0860	N-Acetylmuramoyl-L-alanine amidase
S9968_RS10175	COG0640	Transcriptional regulator
S9968_RS10180	COG2217	Heavy metal translocating P-type atpase
S9968_RS10195	COG0842	Transport permease protein
S9968_RS10200	COG1131	(ABC) transporter
S9968_RS10210	COG0446	pyridine nucleotide-disulphide oxidoreductase
S9968_RS10365	COG0270	DNA (cytosine-5-)-methyltransferase activity
S9968_RS10430	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
S9968_RS10440	COG3425	synthase
S9968_RS10455	COG1272	protein, Hemolysin III
S9968_RS10500	COG0745	RESPONSE REGULATOR receiver
S9968_RS10505	COG2357	RelA SpoT domain protein
S9968_RS10510	COG1132	(ABC) transporter
S9968_RS10525	COG0737	Belongs to the 5'-nucleotidase family
S9968_RS10530	COG0242	peptide deformylase activity
S9968_RS10535	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
S9968_RS10545	COG1132	(ABC) transporter
S9968_RS10560	COG0488	(ABC) transporter
S9968_RS10590	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
S9968_RS10590	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
S9968_RS10590	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
S9968_RS10595	COG1105	Belongs to the carbohydrate kinase PfkB family
S9968_RS10600	COG1349	DNA-binding transcription factor activity
S9968_RS10605	COG1705	Flagellar rod assembly protein muramidase FlgJ
S9968_RS10605	COG1388	LysM domain
S9968_RS10655	COG1837	Belongs to the UPF0109 family
S9968_RS10660	COG0228	four-way junction DNA binding
S9968_RS10665	COG0577	efflux transmembrane transporter activity
S9968_RS10670	COG1136	(ABC) transporter
S9968_RS10675	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
S9968_RS10685	COG0505	Belongs to the CarA family
S9968_RS10695	COG0564	pseudouridine synthase activity
S9968_RS10705	COG0583	DNA-binding transcription factor activity
S9968_RS10710	COG0211	Belongs to the bacterial ribosomal protein bL27 family
S9968_RS10735	COG1104	cysteine desulfurase activity
S9968_RS10745	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
S9968_RS10770	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
S9968_RS10775	COG1368	sulfuric ester hydrolase activity
S9968_RS10780	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
S9968_RS10790	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
S9968_RS10820	COG2244	polysaccharide biosynthetic process
S9968_RS10830	COG1120	ATPase activity
S9968_RS10835	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
S9968_RS10840	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
S9968_RS10845	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
S9968_RS10860	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
S9968_RS10865	COG1253	flavin adenine dinucleotide binding
S9968_RS10870	COG2519	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
S9968_RS10875	COG1242	4 iron, 4 sulfur cluster binding
S9968_RS10880	COG0671	phosphoesterase, PA-phosphatase related
S9968_RS10885	COG3601	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
S9968_RS10920	COG0297	glycogen (starch) synthase activity
S9968_RS10960	COG3475	LICD family
S9968_RS10975	COG0463	Glycosyl transferase, family 2
S9968_RS10980	COG1215	transferase activity, transferring glycosyl groups
S9968_RS10990	COG1091	dTDP-4-dehydrorhamnose reductase activity
S9968_RS10995	COG2151	metal-sulfur cluster biosynthetic enzyme
S9968_RS11000	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
S9968_RS11005	COG0358	DNA primase activity
S9968_RS11010	COG1970	mechanosensitive ion channel activity
S9968_RS11025	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
S9968_RS11030	COG0004	ammonium transporteR
S9968_RS11050	COG2271	Major facilitator Superfamily
S9968_RS11055	COG0058	SHG alpha-glucan phosphorylase activity
S9968_RS11060	COG1640	4-alpha-glucanotransferase
S9968_RS11065	COG1609	Transcriptional regulator
S9968_RS11075	COG1175	transmembrane transport
S9968_RS11080	COG3833	ABC-type maltose transport systems, permease component
S9968_RS11085	COG3104	oligopeptide transport
S9968_RS11105	COG0438	transferase activity, transferring glycosyl groups
S9968_RS11150	COG0456	acetyltransferase
S9968_RS11160	COG2226	methyltransferase
S9968_RS11190	COG0488	(ABC) transporter