AMD29_RS00170 SM01400 AMD29_RS00170 AMD29_RS00205 SM01211 AMD29_RS00205 AMD29_RS00230 SM00798 AICARFT/IMPCHase bienzyme AMD29_RS00230 SM00851 MGS-like domain AMD29_RS00240 SM00257 Lysin motif AMD29_RS00275 SM01130 AMD29_RS00275 AMD29_RS00295 SM01209 AMD29_RS00295 AMD29_RS00295 SM01210 AMD29_RS00295 AMD29_RS00300 SM01001 AIR carboxylase AMD29_RS00315 SM00998 Adenylosuccinate lyase C-terminus AMD29_RS00320 SM00530 Helix-turn-helix XRE-family like proteins AMD29_RS00325 SM00382 ATPases associated with a variety of cellular activities AMD29_RS00330 SM00226 Low molecular weight phosphatase family AMD29_RS00335 SM00698 Possible plasma membrane-binding motif in junctophilins, PIP-5-kinases and protein kinases. AMD29_RS00350 SM00829 Enoylreductase AMD29_RS00365 SM01403 AMD29_RS00365 AMD29_RS00385 SM01382 AMD29_RS00385 AMD29_RS00385 SM01383 AMD29_RS00385 AMD29_RS00400 SM00322 K homology RNA-binding domain AMD29_RS00420 SM01374 AMD29_RS00420 AMD29_RS00425 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. AMD29_RS00480 SM00316 Ribosomal protein S1-like RNA-binding domain AMD29_RS00495 SM00662 RNA polymerases D AMD29_RS00675 SM00490 helicase superfamily c-terminal domain AMD29_RS00690 SM00942 Primase C terminal 1 (PriCT-1) AMD29_RS00690 SM00943 Bifunctional DNA primase/polymerase, N-terminal AMD29_RS00695 SM00990 AMD29_RS00695 AMD29_RS00715 SM00507 HNH nucleases AMD29_RS00840 SM00047 Lysozyme subfamily 2 AMD29_RS00865 SM00641 Glycosyl hydrolases family 25 AMD29_RS00875 SM00530 Helix-turn-helix XRE-family like proteins AMD29_RS00885 SM00855 Phosphoglycerate mutase family AMD29_RS00895 SM00047 Lysozyme subfamily 2 AMD29_RS00915 SM00271 DnaJ molecular chaperone homology domain AMD29_RS00920 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMD29_RS00980 SM00382 ATPases associated with a variety of cellular activities AMD29_RS00985 SM00947 Carbonic anhydrase AMD29_RS01015 SM00382 ATPases associated with a variety of cellular activities AMD29_RS01030 SM00354 helix_turn _helix lactose operon repressor AMD29_RS01040 SM00382 ATPases associated with a variety of cellular activities AMD29_RS01045 SM00448 cheY-homologous receiver domain AMD29_RS01045 SM00862 Transcriptional regulatory protein, C terminal AMD29_RS01050 SM00387 Histidine kinase-like ATPases AMD29_RS01050 SM00388 His Kinase A (phosphoacceptor) domain AMD29_RS01085 SM01120 AMD29_RS01085 AMD29_RS01085 SM01121 AMD29_RS01085 AMD29_RS01090 SM00244 prohibitin homologues AMD29_RS01125 SM00382 ATPases associated with a variety of cellular activities AMD29_RS01130 SM00062 Bacterial periplasmic substrate-binding proteins AMD29_RS01155 SM00382 ATPases associated with a variety of cellular activities AMD29_RS01185 SM00936 Penicillin-binding protein 5, C-terminal domain AMD29_RS01205 SM00382 ATPases associated with a variety of cellular activities AMD29_RS01210 SM00382 ATPases associated with a variety of cellular activities AMD29_RS01245 SM00347 helix_turn_helix multiple antibiotic resistance protein AMD29_RS01250 SM00382 ATPases associated with a variety of cellular activities AMD29_RS01260 SM00892 DNA/RNA non-specific endonuclease AMD29_RS01265 SM00363 S4 RNA-binding domain AMD29_RS01280 SM00663 RNA polymerase I subunit A N-terminus AMD29_RS01335 SM00530 Helix-turn-helix XRE-family like proteins AMD29_RS01395 SM00387 Histidine kinase-like ATPases AMD29_RS01400 SM00448 cheY-homologous receiver domain AMD29_RS01400 SM00850 LytTr DNA-binding domain AMD29_RS01430 SM00382 ATPases associated with a variety of cellular activities AMD29_RS01435 SM00382 ATPases associated with a variety of cellular activities AMD29_RS01445 SM00642 Alpha-amylase domain AMD29_RS01470 SM00861 Transketolase, pyrimidine binding domain AMD29_RS01480 SM01387 AMD29_RS01480 AMD29_RS01485 SM00316 Ribosomal protein S1-like RNA-binding domain AMD29_RS01485 SM00322 K homology RNA-binding domain AMD29_RS01505 SM00840 AMD29_RS01505 AMD29_RS01515 SM00967 RNA 2'-O ribose methyltransferase substrate binding AMD29_RS01545 SM00530 Helix-turn-helix XRE-family like proteins AMD29_RS01645 SM00530 Helix-turn-helix XRE-family like proteins AMD29_RS01670 SM00116 Domain in cystathionine beta-synthase and other proteins. AMD29_RS01670 SM00382 ATPases associated with a variety of cellular activities AMD29_RS01785 SM00530 Helix-turn-helix XRE-family like proteins AMD29_RS01830 SM00382 ATPases associated with a variety of cellular activities AMD29_RS01910 SM00861 Transketolase, pyrimidine binding domain AMD29_RS01920 SM00382 ATPases associated with a variety of cellular activities AMD29_RS01955 SM00740 AMD29_RS01955 AMD29_RS01965 SM00487 DEAD-like helicases superfamily AMD29_RS01965 SM00490 helicase superfamily c-terminal domain AMD29_RS01970 SM00062 Bacterial periplasmic substrate-binding proteins AMD29_RS01980 SM00382 ATPases associated with a variety of cellular activities AMD29_RS02035 SM00981 AMD29_RS02035 AMD29_RS02050 SM00322 K homology RNA-binding domain AMD29_RS02050 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AMD29_RS02055 SM00382 ATPases associated with a variety of cellular activities AMD29_RS02070 SM00421 helix_turn_helix, Lux Regulon AMD29_RS02070 SM00448 cheY-homologous receiver domain AMD29_RS02080 SM00072 Guanylate kinase homologues. AMD29_RS02085 SM01409 AMD29_RS02085 AMD29_RS02090 SM00487 DEAD-like helicases superfamily AMD29_RS02090 SM00490 helicase superfamily c-terminal domain AMD29_RS02105 SM00331 Sigma factor PP2C-like phosphatases AMD29_RS02105 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain AMD29_RS02110 SM00220 Serine/Threonine protein kinases, catalytic domain AMD29_RS02110 SM00740 AMD29_RS02110 AMD29_RS02125 SM00421 helix_turn_helix, Lux Regulon AMD29_RS02125 SM00448 cheY-homologous receiver domain AMD29_RS02135 SM00316 Ribosomal protein S1-like RNA-binding domain AMD29_RS02145 SM00420 helix_turn_helix, Deoxyribose operon repressor AMD29_RS02145 SM01134 AMD29_RS02145 AMD29_RS02195 SM00487 DEAD-like helicases superfamily AMD29_RS02195 SM00490 helicase superfamily c-terminal domain AMD29_RS02250 SM00347 helix_turn_helix multiple antibiotic resistance protein AMD29_RS02270 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AMD29_RS02275 SM00822 AMD29_RS02275 AMD29_RS02280 SM00825 Beta-ketoacyl synthase AMD29_RS02295 SM00878 Biotin carboxylase C-terminal domain AMD29_RS02400 SM00382 ATPases associated with a variety of cellular activities AMD29_RS02430 SM00322 K homology RNA-binding domain AMD29_RS02485 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs AMD29_RS02485 SM00474 3'-5' exonuclease AMD29_RS02485 SM00475 5'-3' exonuclease AMD29_RS02485 SM00482 DNA polymerase A domain AMD29_RS02490 SM00881 CoA binding domain AMD29_RS02505 SM00448 cheY-homologous receiver domain AMD29_RS02505 SM00862 Transcriptional regulatory protein, C terminal AMD29_RS02510 SM00387 Histidine kinase-like ATPases AMD29_RS02510 SM00388 His Kinase A (phosphoacceptor) domain AMD29_RS02535 SM00849 Metallo-beta-lactamase superfamily AMD29_RS02590 SM00393 Putative single-stranded nucleic acids-binding domain AMD29_RS02590 SM01245 AMD29_RS02590 AMD29_RS02695 SM00871 Bacterial transcription activator, effector binding domain AMD29_RS02710 SM00422 helix_turn_helix, mercury resistance AMD29_RS02735 SM00342 helix_turn_helix, arabinose operon control protein AMD29_RS02790 SM01007 Class II Aldolase and Adducin N-terminal domain AMD29_RS02810 SM00342 helix_turn_helix, arabinose operon control protein AMD29_RS02895 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AMD29_RS02895 SM00487 DEAD-like helicases superfamily AMD29_RS02995 SM00382 ATPases associated with a variety of cellular activities AMD29_RS03000 SM00382 ATPases associated with a variety of cellular activities AMD29_RS03015 SM00729 Elongator protein 3, MiaB family, Radical SAM AMD29_RS03015 SM00876 Biotin and Thiamin Synthesis associated domain AMD29_RS03035 SM00478 endonuclease III AMD29_RS03055 SM00450 Rhodanese Homology Domain AMD29_RS03060 SM00838 Elongation factor G C-terminus AMD29_RS03085 SM00842 Cell division protein FtsA AMD29_RS03090 SM00864 Tubulin/FtsZ family, GTPase domain AMD29_RS03090 SM00865 Tubulin/FtsZ family, C-terminal domain AMD29_RS03110 SM00363 S4 RNA-binding domain AMD29_RS03135 SM00382 ATPases associated with a variety of cellular activities AMD29_RS03135 SM01086 C-terminal, D2-small domain, of ClpB protein AMD29_RS03150 SM00382 ATPases associated with a variety of cellular activities AMD29_RS03185 SM00363 S4 RNA-binding domain AMD29_RS03215 SM00411 bacterial (prokaryotic) histone like domain AMD29_RS03250 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AMD29_RS03260 SM00831 Cation transporter/ATPase, N-terminus AMD29_RS03280 SM00937 AMD29_RS03280 AMD29_RS03285 SM00382 ATPases associated with a variety of cellular activities AMD29_RS03300 SM00849 Metallo-beta-lactamase superfamily AMD29_RS03310 SM00479 AMD29_RS03310 AMD29_RS03310 SM00491 AMD29_RS03310 AMD29_RS03385 SM00830 Chorismate mutase type II AMD29_RS03430 SM00382 ATPases associated with a variety of cellular activities AMD29_RS03440 SM00448 cheY-homologous receiver domain AMD29_RS03440 SM00862 Transcriptional regulatory protein, C terminal AMD29_RS03470 SM00387 Histidine kinase-like ATPases AMD29_RS03470 SM00433 TopoisomeraseII AMD29_RS03495 SM01192 AMD29_RS03495 AMD29_RS03495 SM01193 AMD29_RS03495 AMD29_RS03500 SM00892 DNA/RNA non-specific endonuclease AMD29_RS03570 SM00342 helix_turn_helix, arabinose operon control protein AMD29_RS03600 SM00327 von Willebrand factor (vWF) type A domain AMD29_RS03635 SM00382 ATPases associated with a variety of cellular activities AMD29_RS03660 SM00822 AMD29_RS03660 AMD29_RS03675 SM00382 ATPases associated with a variety of cellular activities AMD29_RS03695 SM00825 Beta-ketoacyl synthase AMD29_RS03780 SM00382 ATPases associated with a variety of cellular activities AMD29_RS03790 SM00892 DNA/RNA non-specific endonuclease AMD29_RS03800 SM00382 ATPases associated with a variety of cellular activities AMD29_RS03845 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMD29_RS03845 SM00895 AMD29_RS03845 AMD29_RS03885 SM00354 helix_turn _helix lactose operon repressor AMD29_RS03890 SM00642 Alpha-amylase domain AMD29_RS03905 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AMD29_RS03910 SM00448 cheY-homologous receiver domain AMD29_RS03910 SM00862 Transcriptional regulatory protein, C terminal AMD29_RS03935 SM00062 Bacterial periplasmic substrate-binding proteins AMD29_RS03940 SM00382 ATPases associated with a variety of cellular activities AMD29_RS03945 SM00448 cheY-homologous receiver domain AMD29_RS03945 SM00862 Transcriptional regulatory protein, C terminal AMD29_RS03950 SM00091 PAS domain AMD29_RS03950 SM00387 Histidine kinase-like ATPases AMD29_RS03950 SM00388 His Kinase A (phosphoacceptor) domain AMD29_RS03955 SM00849 Metallo-beta-lactamase superfamily AMD29_RS03965 SM00358 Double-stranded RNA binding motif AMD29_RS03965 SM00535 Ribonuclease III family AMD29_RS03970 SM00968 SMC proteins Flexible Hinge Domain AMD29_RS03985 SM00382 ATPases associated with a variety of cellular activities AMD29_RS03985 SM00962 SRP54-type protein, GTPase domain AMD29_RS03985 SM00963 SRP54-type protein, helical bundle domain AMD29_RS04010 SM00316 Ribosomal protein S1-like RNA-binding domain AMD29_RS04010 SM00732 Likely ribonuclease with RNase H fold. AMD29_RS04015 SM00731 SprT homologues. AMD29_RS04105 SM00855 Phosphoglycerate mutase family AMD29_RS04160 SM00855 Phosphoglycerate mutase family AMD29_RS04170 SM00493 AMD29_RS04170 AMD29_RS04225 SM00487 DEAD-like helicases superfamily AMD29_RS04225 SM00490 helicase superfamily c-terminal domain AMD29_RS04240 SM00563 Phosphate acyltransferases AMD29_RS04245 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AMD29_RS04250 SM00849 Metallo-beta-lactamase superfamily AMD29_RS04260 SM00354 helix_turn _helix lactose operon repressor AMD29_RS04285 SM01061 CAT RNA binding domain AMD29_RS04345 SM00363 S4 RNA-binding domain AMD29_RS04385 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AMD29_RS04410 SM00530 Helix-turn-helix XRE-family like proteins AMD29_RS04460 SM00487 DEAD-like helicases superfamily AMD29_RS04460 SM00490 helicase superfamily c-terminal domain AMD29_RS04475 SM00382 ATPases associated with a variety of cellular activities AMD29_RS04520 SM00382 ATPases associated with a variety of cellular activities AMD29_RS04560 SM00116 Domain in cystathionine beta-synthase and other proteins. AMD29_RS04585 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AMD29_RS04585 SM00292 breast cancer carboxy-terminal domain AMD29_RS04585 SM00532 Ligase N family AMD29_RS04590 SM00046 Diacylglycerol kinase catalytic domain (presumed) AMD29_RS04595 SM00642 Alpha-amylase domain AMD29_RS04600 SM00642 Alpha-amylase domain AMD29_RS04650 SM00382 ATPases associated with a variety of cellular activities AMD29_RS04675 SM00892 DNA/RNA non-specific endonuclease AMD29_RS04690 SM00873 B3/4 domain AMD29_RS04690 SM00874 tRNA synthetase B5 domain AMD29_RS04690 SM00896 Ferredoxin-fold anticodon binding domain AMD29_RS04720 SM00382 ATPases associated with a variety of cellular activities AMD29_RS04730 SM00861 Transketolase, pyrimidine binding domain AMD29_RS04785 SM00729 Elongator protein 3, MiaB family, Radical SAM AMD29_RS04830 SM00562 AMD29_RS04830 AMD29_RS04835 SM00838 Elongation factor G C-terminus AMD29_RS04840 SM00365 Leucine-rich repeat, SDS22-like subfamily AMD29_RS04840 SM00369 Leucine-rich repeats, typical (most populated) subfamily AMD29_RS04845 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AMD29_RS04860 SM00831 Cation transporter/ATPase, N-terminus AMD29_RS04890 SM00382 ATPases associated with a variety of cellular activities AMD29_RS04895 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMD29_RS04900 SM00481 DNA polymerase alpha chain like domain AMD29_RS04935 SM00382 ATPases associated with a variety of cellular activities AMD29_RS04940 SM00062 Bacterial periplasmic substrate-binding proteins AMD29_RS04970 SM00382 ATPases associated with a variety of cellular activities AMD29_RS04995 SM00434 DNA Topoisomerase IV AMD29_RS05035 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMD29_RS05035 SM00866 AMD29_RS05035 AMD29_RS05060 SM00245 tail specific protease AMD29_RS05065 SM00382 ATPases associated with a variety of cellular activities AMD29_RS05075 SM00448 cheY-homologous receiver domain AMD29_RS05075 SM00862 Transcriptional regulatory protein, C terminal AMD29_RS05080 SM00387 Histidine kinase-like ATPases AMD29_RS05105 SM00382 ATPases associated with a variety of cellular activities AMD29_RS05105 SM00962 SRP54-type protein, GTPase domain AMD29_RS05105 SM00963 SRP54-type protein, helical bundle domain AMD29_RS05115 SM00387 Histidine kinase-like ATPases AMD29_RS05115 SM00388 His Kinase A (phosphoacceptor) domain AMD29_RS05120 SM00448 cheY-homologous receiver domain AMD29_RS05120 SM00862 Transcriptional regulatory protein, C terminal AMD29_RS05135 SM00382 ATPases associated with a variety of cellular activities AMD29_RS05140 SM00382 ATPases associated with a variety of cellular activities AMD29_RS05180 SM00904 Riboflavin kinase AMD29_RS05215 SM00382 ATPases associated with a variety of cellular activities AMD29_RS05220 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AMD29_RS05220 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AMD29_RS05220 SM00493 AMD29_RS05220 AMD29_RS05235 SM00382 ATPases associated with a variety of cellular activities AMD29_RS05250 SM01266 AMD29_RS05250 AMD29_RS05275 SM00448 cheY-homologous receiver domain AMD29_RS05275 SM00850 LytTr DNA-binding domain AMD29_RS05280 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AMD29_RS05380 SM00851 MGS-like domain AMD29_RS05380 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AMD29_RS05380 SM01209 AMD29_RS05380 AMD29_RS05385 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain AMD29_RS05405 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family AMD29_RS05415 SM00382 ATPases associated with a variety of cellular activities AMD29_RS05435 SM00155 Phospholipase D. Active site motifs. AMD29_RS05455 SM00506 Appr-1"-p processing enzyme AMD29_RS05505 SM00382 ATPases associated with a variety of cellular activities AMD29_RS05510 SM00382 ATPases associated with a variety of cellular activities AMD29_RS05540 SM00937 AMD29_RS05540 AMD29_RS05585 SM01240 AMD29_RS05585 AMD29_RS05625 SM00954 Region found in RelA / SpoT proteins AMD29_RS05630 SM01118 AMD29_RS05630 AMD29_RS05635 SM01400 AMD29_RS05635 AMD29_RS05650 SM00881 CoA binding domain AMD29_RS05680 SM00342 helix_turn_helix, arabinose operon control protein AMD29_RS05705 SM00382 ATPases associated with a variety of cellular activities AMD29_RS05720 SM00905 Dihydroneopterin aldolase AMD29_RS05805 SM00530 Helix-turn-helix XRE-family like proteins AMD29_RS05830 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMD29_RS05915 SM00316 Ribosomal protein S1-like RNA-binding domain AMD29_RS05940 SM00434 DNA Topoisomerase IV AMD29_RS05945 SM00387 Histidine kinase-like ATPases AMD29_RS05945 SM00433 TopoisomeraseII AMD29_RS05950 SM01207 AMD29_RS05950 AMD29_RS05965 SM00986 Uracil DNA glycosylase superfamily AMD29_RS05965 SM00987 UreE urease accessory protein, C-terminal domain AMD29_RS05990 SM00858 AMD29_RS05990 AMD29_RS06105 SM00849 Metallo-beta-lactamase superfamily AMD29_RS06110 SM00382 ATPases associated with a variety of cellular activities AMD29_RS06140 SM00028 Tetratricopeptide repeats AMD29_RS06165 SM00530 Helix-turn-helix XRE-family like proteins AMD29_RS06175 SM00641 Glycosyl hydrolases family 25 AMD29_RS06200 SM00047 Lysozyme subfamily 2 AMD29_RS06290 SM00507 HNH nucleases AMD29_RS06400 SM00530 Helix-turn-helix XRE-family like proteins AMD29_RS06405 SM00530 Helix-turn-helix XRE-family like proteins AMD29_RS06470 SM00728 Clostridial hydrophobic, with a conserved W residue, domain. AMD29_RS06515 SM00642 Alpha-amylase domain AMD29_RS06525 SM00986 Uracil DNA glycosylase superfamily AMD29_RS06525 SM00987 UreE urease accessory protein, C-terminal domain AMD29_RS06545 SM00465 GIY-YIG type nucleases (URI domain) AMD29_RS06635 SM00479 AMD29_RS06635 AMD29_RS06635 SM00497 Intron encoded nuclease repeat motif AMD29_RS06710 SM00382 ATPases associated with a variety of cellular activities AMD29_RS06710 SM01086 C-terminal, D2-small domain, of ClpB protein AMD29_RS06745 SM00382 ATPases associated with a variety of cellular activities AMD29_RS06745 SM00994 ClpX C4-type zinc finger AMD29_RS06745 SM01086 C-terminal, D2-small domain, of ClpB protein AMD29_RS06785 SM00046 Diacylglycerol kinase catalytic domain (presumed) AMD29_RS06820 SM00387 Histidine kinase-like ATPases AMD29_RS06820 SM00388 His Kinase A (phosphoacceptor) domain AMD29_RS06825 SM00448 cheY-homologous receiver domain AMD29_RS06825 SM00862 Transcriptional regulatory protein, C terminal AMD29_RS06830 SM00954 Region found in RelA / SpoT proteins AMD29_RS06835 SM00382 ATPases associated with a variety of cellular activities AMD29_RS06840 SM00382 ATPases associated with a variety of cellular activities AMD29_RS06845 SM00347 helix_turn_helix multiple antibiotic resistance protein AMD29_RS06860 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AMD29_RS06870 SM00382 ATPases associated with a variety of cellular activities AMD29_RS06875 SM00382 ATPases associated with a variety of cellular activities AMD29_RS06885 SM00382 ATPases associated with a variety of cellular activities AMD29_RS06925 SM00420 helix_turn_helix, Deoxyribose operon repressor AMD29_RS06925 SM01134 AMD29_RS06925 AMD29_RS06935 SM00287 Bacterial SH3 domain homologues AMD29_RS06995 SM00382 ATPases associated with a variety of cellular activities AMD29_RS07005 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AMD29_RS07010 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain AMD29_RS07020 SM00363 S4 RNA-binding domain AMD29_RS07050 SM00854 Bacterial capsule synthesis protein PGA_cap AMD29_RS07055 SM00981 AMD29_RS07055 AMD29_RS07125 SM00257 Lysin motif AMD29_RS07155 SM00382 ATPases associated with a variety of cellular activities AMD29_RS07180 SM01131 AMD29_RS07180 AMD29_RS07190 SM01091 Transporter associated domain AMD29_RS07200 SM00729 Elongator protein 3, MiaB family, Radical SAM AMD29_RS07205 SM00014 Acid phosphatase homologues AMD29_RS07330 SM00400 zinc finger AMD29_RS07330 SM00493 AMD29_RS07330 AMD29_RS07350 SM00062 Bacterial periplasmic substrate-binding proteins AMD29_RS07350 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AMD29_RS07365 SM00450 Rhodanese Homology Domain AMD29_RS07390 SM00354 helix_turn _helix lactose operon repressor AMD29_RS07435 SM00957 SecA DEAD-like domain AMD29_RS07435 SM00958 SecA preprotein cross-linking domain AMD29_RS07505 SM00487 DEAD-like helicases superfamily AMD29_RS07505 SM00490 helicase superfamily c-terminal domain AMD29_RS07515 SM00062 Bacterial periplasmic substrate-binding proteins AMD29_RS07515 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AMD29_RS07520 SM00382 ATPases associated with a variety of cellular activities AMD29_RS07560 SM00363 S4 RNA-binding domain AMD29_RS07595 SM00316 Ribosomal protein S1-like RNA-binding domain AMD29_RS07595 SM00955 AMD29_RS07595 AMD29_RS07615 SM00382 ATPases associated with a variety of cellular activities AMD29_RS07625 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain AMD29_RS07625 SM01232 AMD29_RS07625 AMD29_RS07630 SM00530 Helix-turn-helix XRE-family like proteins AMD29_RS07635 SM00460 Transglutaminase/protease-like homologues AMD29_RS07730 SM00382 ATPases associated with a variety of cellular activities AMD29_RS07735 SM00382 ATPases associated with a variety of cellular activities AMD29_RS07760 SM00649 Ribosomal protein L11/L12 AMD29_RS07785 SM00382 ATPases associated with a variety of cellular activities AMD29_RS07785 SM00843 AMD29_RS07785 AMD29_RS07800 SM00382 ATPases associated with a variety of cellular activities AMD29_RS07810 SM00529 Helix-turn-helix diphteria tox regulatory element AMD29_RS07810 SM00899 AMD29_RS07810 AMD29_RS07850 SM01022 AMD29_RS07850 AMD29_RS07995 SM00116 Domain in cystathionine beta-synthase and other proteins. AMD29_RS08000 SM00382 ATPases associated with a variety of cellular activities AMD29_RS08005 SM00382 ATPases associated with a variety of cellular activities AMD29_RS08065 SM01234 AMD29_RS08065 AMD29_RS08070 SM00363 S4 RNA-binding domain AMD29_RS08135 SM00967 RNA 2'-O ribose methyltransferase substrate binding AMD29_RS08155 SM00062 Bacterial periplasmic substrate-binding proteins AMD29_RS08190 SM00487 DEAD-like helicases superfamily AMD29_RS08190 SM00490 helicase superfamily c-terminal domain AMD29_RS08215 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMD29_RS08215 SM00387 Histidine kinase-like ATPases AMD29_RS08215 SM00388 His Kinase A (phosphoacceptor) domain AMD29_RS08220 SM00448 cheY-homologous receiver domain AMD29_RS08220 SM00862 Transcriptional regulatory protein, C terminal AMD29_RS08260 SM00382 ATPases associated with a variety of cellular activities AMD29_RS08280 SM00829 Enoylreductase AMD29_RS08290 SM00382 ATPases associated with a variety of cellular activities AMD29_RS08290 SM00930 AMD29_RS08290 AMD29_RS08305 SM00062 Bacterial periplasmic substrate-binding proteins AMD29_RS08335 SM01120 AMD29_RS08335 AMD29_RS08355 SM00422 helix_turn_helix, mercury resistance AMD29_RS08385 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AMD29_RS08395 SM01103 AMD29_RS08395 AMD29_RS08415 SM00845 GatB domain AMD29_RS08440 SM00116 Domain in cystathionine beta-synthase and other proteins. AMD29_RS08475 SM00870 AMD29_RS08475 AMD29_RS08490 SM00487 DEAD-like helicases superfamily AMD29_RS08490 SM00490 helicase superfamily c-terminal domain AMD29_RS08500 SM01005 Alanine racemase, C-terminal domain AMD29_RS08515 SM00957 SecA DEAD-like domain AMD29_RS08515 SM00958 SecA preprotein cross-linking domain AMD29_RS08535 SM00640 Glycosyl hydrolases family 32 AMD29_RS08540 SM00354 helix_turn _helix lactose operon repressor AMD29_RS08555 SM00841 Elongation factor P, C-terminal AMD29_RS08555 SM01185 AMD29_RS08555 AMD29_RS08595 SM00382 ATPases associated with a variety of cellular activities AMD29_RS08625 SM00478 endonuclease III AMD29_RS08630 SM00530 Helix-turn-helix XRE-family like proteins AMD29_RS08640 SM00014 Acid phosphatase homologues AMD29_RS08645 SM00463 Small MutS-related domain AMD29_RS08645 SM00533 DNA-binding domain of DNA mismatch repair MUTS family AMD29_RS08645 SM00534 ATPase domain of DNA mismatch repair MUTS family AMD29_RS08670 SM00382 ATPases associated with a variety of cellular activities AMD29_RS08725 SM00419 helix_turn_helix, cAMP Regulatory protein AMD29_RS08730 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain AMD29_RS08730 SM00940 X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal AMD29_RS08745 SM00382 ATPases associated with a variety of cellular activities AMD29_RS08750 SM00382 ATPases associated with a variety of cellular activities AMD29_RS08790 SM00861 Transketolase, pyrimidine binding domain AMD29_RS08880 SM00422 helix_turn_helix, mercury resistance AMD29_RS08885 SM00479 AMD29_RS08885 AMD29_RS08935 SM00849 Metallo-beta-lactamase superfamily AMD29_RS08945 SM01230 AMD29_RS08945 AMD29_RS08950 SM00422 helix_turn_helix, mercury resistance AMD29_RS08970 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AMD29_RS08975 SM00838 Elongation factor G C-terminus AMD29_RS08975 SM00889 Elongation factor G, domain IV AMD29_RS09005 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain AMD29_RS09025 SM00650 Ribosomal RNA adenine dimethylases AMD29_RS09035 SM00493 AMD29_RS09035 AMD29_RS09090 SM00387 Histidine kinase-like ATPases AMD29_RS09090 SM00388 His Kinase A (phosphoacceptor) domain AMD29_RS09095 SM00448 cheY-homologous receiver domain AMD29_RS09095 SM00862 Transcriptional regulatory protein, C terminal AMD29_RS09115 SM00382 ATPases associated with a variety of cellular activities AMD29_RS09165 SM00354 helix_turn _helix lactose operon repressor AMD29_RS09175 SM01007 Class II Aldolase and Adducin N-terminal domain AMD29_RS09185 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family AMD29_RS09215 SM00788 Adenylosuccinate synthetase AMD29_RS09265 SM00382 ATPases associated with a variety of cellular activities AMD29_RS09265 SM01086 C-terminal, D2-small domain, of ClpB protein AMD29_RS09335 SM00100 Cyclic nucleotide-monophosphate binding domain AMD29_RS09345 SM00354 helix_turn _helix lactose operon repressor AMD29_RS09365 SM00347 helix_turn_helix multiple antibiotic resistance protein AMD29_RS09370 SM00479 AMD29_RS09370 AMD29_RS09370 SM00481 DNA polymerase alpha chain like domain AMD29_RS09375 SM00047 Lysozyme subfamily 2 AMD29_RS09400 SM01323 AMD29_RS09400 AMD29_RS09410 SM00919 Malic enzyme, NAD binding domain AMD29_RS09410 SM01274 AMD29_RS09410 AMD29_RS09425 SM00448 cheY-homologous receiver domain AMD29_RS09435 SM00642 Alpha-amylase domain AMD29_RS09440 SM00382 ATPases associated with a variety of cellular activities AMD29_RS09455 SM01133 AMD29_RS09455 AMD29_RS09500 SM00420 helix_turn_helix, Deoxyribose operon repressor AMD29_RS09500 SM01134 AMD29_RS09500 AMD29_RS09520 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AMD29_RS09520 SM00954 Region found in RelA / SpoT proteins AMD29_RS09555 SM00342 helix_turn_helix, arabinose operon control protein AMD29_RS09555 SM00448 cheY-homologous receiver domain AMD29_RS09635 SM00387 Histidine kinase-like ATPases AMD29_RS09635 SM00388 His Kinase A (phosphoacceptor) domain AMD29_RS09640 SM00448 cheY-homologous receiver domain AMD29_RS09640 SM00862 Transcriptional regulatory protein, C terminal AMD29_RS09650 SM00382 ATPases associated with a variety of cellular activities AMD29_RS09690 SM00422 helix_turn_helix, mercury resistance AMD29_RS09720 SM00382 ATPases associated with a variety of cellular activities AMD29_RS09730 SM00901 AMD29_RS09730 AMD29_RS09765 SM00530 Helix-turn-helix XRE-family like proteins AMD29_RS09885 SM00382 ATPases associated with a variety of cellular activities AMD29_RS09895 SM00530 Helix-turn-helix XRE-family like proteins AMD29_RS09900 SM00014 Acid phosphatase homologues AMD29_RS09920 SM00450 Rhodanese Homology Domain AMD29_RS09975 SM00387 Histidine kinase-like ATPases AMD29_RS09975 SM00388 His Kinase A (phosphoacceptor) domain AMD29_RS10015 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. AMD29_RS10015 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. AMD29_RS10050 SM01133 AMD29_RS10050 AMD29_RS10065 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMD29_RS10080 SM00883 Chaperonin 10 Kd subunit AMD29_RS10085 SM00382 ATPases associated with a variety of cellular activities AMD29_RS10155 SM00732 Likely ribonuclease with RNase H fold. AMD29_RS10170 SM00382 ATPases associated with a variety of cellular activities AMD29_RS10175 SM00852 Probable molybdopterin binding domain AMD29_RS10185 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AMD29_RS10195 SM00853 MutL C terminal dimerisation domain AMD29_RS10195 SM01340 AMD29_RS10195 AMD29_RS10200 SM00357 Cold shock protein domain AMD29_RS10205 SM00533 DNA-binding domain of DNA mismatch repair MUTS family AMD29_RS10205 SM00534 ATPase domain of DNA mismatch repair MUTS family AMD29_RS10215 SM00836 DALR anticodon binding domain AMD29_RS10215 SM01016 Arginyl tRNA synthetase N terminal dom AMD29_RS10265 SM00530 Helix-turn-helix XRE-family like proteins AMD29_RS10315 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AMD29_RS10380 SM00448 cheY-homologous receiver domain AMD29_RS10380 SM00862 Transcriptional regulatory protein, C terminal AMD29_RS10385 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMD29_RS10385 SM00387 Histidine kinase-like ATPases AMD29_RS10385 SM00388 His Kinase A (phosphoacceptor) domain AMD29_RS10405 SM00387 Histidine kinase-like ATPases AMD29_RS10410 SM00448 cheY-homologous receiver domain AMD29_RS10415 SM00382 ATPases associated with a variety of cellular activities AMD29_RS10480 SM00885 D5 N terminal like AMD29_RS10485 SM00942 Primase C terminal 1 (PriCT-1) AMD29_RS10520 SM01040 BRO family, N-terminal domain AMD29_RS10530 SM00530 Helix-turn-helix XRE-family like proteins AMD29_RS10560 SM00363 S4 RNA-binding domain AMD29_RS10560 SM01390 AMD29_RS10560 AMD29_RS10585 SM01228 AMD29_RS10585 AMD29_RS10615 SM00257 Lysin motif AMD29_RS10625 SM00382 ATPases associated with a variety of cellular activities AMD29_RS10630 SM00382 ATPases associated with a variety of cellular activities AMD29_RS10665 SM00530 Helix-turn-helix XRE-family like proteins AMD29_RS10670 SM00116 Domain in cystathionine beta-synthase and other proteins. AMD29_RS10670 SM01240 AMD29_RS10670 AMD29_RS10680 SM00419 helix_turn_helix, cAMP Regulatory protein AMD29_RS10685 SM00873 B3/4 domain AMD29_RS10730 SM00382 ATPases associated with a variety of cellular activities AMD29_RS10760 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AMD29_RS10765 SM00470 ParB-like nuclease domain AMD29_RS10770 SM00382 ATPases associated with a variety of cellular activities AMD29_RS10770 SM00760 Bacterial dnaA protein helix-turn-helix domain AMD29_RS10775 SM00480 DNA polymerase III beta subunit AMD29_RS10780 SM00046 Diacylglycerol kinase catalytic domain (presumed) AMD29_RS10800 SM00487 DEAD-like helicases superfamily AMD29_RS10800 SM00490 helicase superfamily c-terminal domain AMD29_RS10800 SM00982 AMD29_RS10800 AMD29_RS10800 SM01058 CarD-like/TRCF domain AMD29_RS10805 SM00363 S4 RNA-binding domain AMD29_RS10825 SM00977 TilS substrate C-terminal domain AMD29_RS10835 SM00382 ATPases associated with a variety of cellular activities