BB165_RS00170	SM01400	BB165_RS00170
BB165_RS00205	SM01211	BB165_RS00205
BB165_RS00230	SM00798	AICARFT/IMPCHase bienzyme
BB165_RS00230	SM00851	MGS-like domain
BB165_RS00240	SM00257	Lysin motif
BB165_RS00275	SM01130	BB165_RS00275
BB165_RS00295	SM01209	BB165_RS00295
BB165_RS00295	SM01210	BB165_RS00295
BB165_RS00300	SM01001	AIR carboxylase
BB165_RS00320	SM00998	Adenylosuccinate lyase C-terminus
BB165_RS00330	SM00382	ATPases associated with a variety of cellular activities
BB165_RS00335	SM00226	Low molecular weight phosphatase family
BB165_RS00340	SM00698	Possible plasma membrane-binding motif in junctophilins, PIP-5-kinases and protein kinases.
BB165_RS00355	SM00829	Enoylreductase
BB165_RS00370	SM01403	BB165_RS00370
BB165_RS00390	SM01382	BB165_RS00390
BB165_RS00390	SM01383	BB165_RS00390
BB165_RS00405	SM00322	K homology RNA-binding domain
BB165_RS00425	SM01374	BB165_RS00425
BB165_RS00430	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
BB165_RS00485	SM00316	Ribosomal protein S1-like RNA-binding domain
BB165_RS00505	SM00662	RNA polymerases D
BB165_RS00620	SM00855	Phosphoglycerate mutase family
BB165_RS00630	SM00047	Lysozyme subfamily 2
BB165_RS00650	SM00271	DnaJ molecular chaperone homology domain
BB165_RS00655	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BB165_RS00715	SM00382	ATPases associated with a variety of cellular activities
BB165_RS00720	SM00947	Carbonic anhydrase
BB165_RS00745	SM00382	ATPases associated with a variety of cellular activities
BB165_RS00760	SM00354	helix_turn _helix lactose operon repressor
BB165_RS00775	SM00382	ATPases associated with a variety of cellular activities
BB165_RS00780	SM00448	cheY-homologous receiver domain
BB165_RS00780	SM00862	Transcriptional regulatory protein, C terminal
BB165_RS00785	SM00387	Histidine kinase-like ATPases
BB165_RS00785	SM00388	His Kinase A (phosphoacceptor) domain
BB165_RS00820	SM01120	BB165_RS00820
BB165_RS00820	SM01121	BB165_RS00820
BB165_RS00825	SM00244	prohibitin homologues
BB165_RS00835	SM00382	ATPases associated with a variety of cellular activities
BB165_RS00840	SM00062	Bacterial periplasmic substrate-binding proteins
BB165_RS00865	SM00382	ATPases associated with a variety of cellular activities
BB165_RS00895	SM00936	Penicillin-binding protein 5, C-terminal domain 
BB165_RS00915	SM00382	ATPases associated with a variety of cellular activities
BB165_RS00920	SM00382	ATPases associated with a variety of cellular activities
BB165_RS00955	SM00347	helix_turn_helix multiple antibiotic resistance protein
BB165_RS00960	SM00382	ATPases associated with a variety of cellular activities
BB165_RS00970	SM00892	DNA/RNA non-specific endonuclease
BB165_RS00975	SM00363	S4 RNA-binding domain
BB165_RS00990	SM00663	RNA polymerase I subunit A N-terminus
BB165_RS01035	SM00530	Helix-turn-helix XRE-family like proteins 
BB165_RS01100	SM00387	Histidine kinase-like ATPases
BB165_RS01105	SM00448	cheY-homologous receiver domain
BB165_RS01105	SM00850	LytTr DNA-binding domain
BB165_RS01140	SM00382	ATPases associated with a variety of cellular activities
BB165_RS01145	SM00382	ATPases associated with a variety of cellular activities
BB165_RS01155	SM00642	Alpha-amylase domain
BB165_RS01180	SM00861	Transketolase, pyrimidine binding domain
BB165_RS01190	SM01387	BB165_RS01190
BB165_RS01195	SM00316	Ribosomal protein S1-like RNA-binding domain
BB165_RS01195	SM00322	K homology RNA-binding domain
BB165_RS01215	SM00840	BB165_RS01215
BB165_RS01225	SM00967	RNA 2'-O ribose methyltransferase substrate binding
BB165_RS01275	SM00530	Helix-turn-helix XRE-family like proteins 
BB165_RS01385	SM00530	Helix-turn-helix XRE-family like proteins 
BB165_RS01415	SM00116	Domain in cystathionine beta-synthase and other proteins.
BB165_RS01415	SM00382	ATPases associated with a variety of cellular activities
BB165_RS01540	SM00382	ATPases associated with a variety of cellular activities
BB165_RS01620	SM00861	Transketolase, pyrimidine binding domain
BB165_RS01630	SM00382	ATPases associated with a variety of cellular activities
BB165_RS01665	SM00740	BB165_RS01665
BB165_RS01675	SM00487	DEAD-like helicases superfamily
BB165_RS01675	SM00490	helicase superfamily c-terminal domain
BB165_RS01680	SM00062	Bacterial periplasmic substrate-binding proteins
BB165_RS01690	SM00382	ATPases associated with a variety of cellular activities
BB165_RS01750	SM00981	BB165_RS01750
BB165_RS01765	SM00322	K homology RNA-binding domain
BB165_RS01765	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BB165_RS01775	SM00382	ATPases associated with a variety of cellular activities
BB165_RS01790	SM00421	helix_turn_helix, Lux Regulon
BB165_RS01790	SM00448	cheY-homologous receiver domain
BB165_RS01800	SM00072	Guanylate kinase homologues.
BB165_RS01805	SM01409	BB165_RS01805
BB165_RS01810	SM00487	DEAD-like helicases superfamily
BB165_RS01810	SM00490	helicase superfamily c-terminal domain
BB165_RS01825	SM00331	Sigma factor PP2C-like phosphatases
BB165_RS01825	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
BB165_RS01830	SM00220	Serine/Threonine protein kinases, catalytic domain
BB165_RS01830	SM00740	BB165_RS01830
BB165_RS01845	SM00421	helix_turn_helix, Lux Regulon
BB165_RS01845	SM00448	cheY-homologous receiver domain
BB165_RS01855	SM00316	Ribosomal protein S1-like RNA-binding domain
BB165_RS01865	SM00420	helix_turn_helix, Deoxyribose operon repressor
BB165_RS01865	SM01134	BB165_RS01865
BB165_RS01915	SM00487	DEAD-like helicases superfamily
BB165_RS01915	SM00490	helicase superfamily c-terminal domain
BB165_RS01970	SM00347	helix_turn_helix multiple antibiotic resistance protein
BB165_RS01990	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
BB165_RS01995	SM00822	BB165_RS01995
BB165_RS02000	SM00825	Beta-ketoacyl synthase
BB165_RS02015	SM00878	Biotin carboxylase C-terminal domain
BB165_RS02125	SM00382	ATPases associated with a variety of cellular activities
BB165_RS02155	SM00322	K homology RNA-binding domain
BB165_RS02210	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
BB165_RS02210	SM00474	3'-5' exonuclease
BB165_RS02210	SM00475	5'-3' exonuclease
BB165_RS02210	SM00482	DNA polymerase A domain
BB165_RS02215	SM00881	CoA binding domain
BB165_RS02230	SM00448	cheY-homologous receiver domain
BB165_RS02230	SM00862	Transcriptional regulatory protein, C terminal
BB165_RS02235	SM00387	Histidine kinase-like ATPases
BB165_RS02235	SM00388	His Kinase A (phosphoacceptor) domain
BB165_RS02260	SM00849	Metallo-beta-lactamase superfamily
BB165_RS02315	SM00393	Putative single-stranded nucleic acids-binding domain
BB165_RS02315	SM01245	BB165_RS02315
BB165_RS02435	SM00871	Bacterial transcription activator, effector binding domain
BB165_RS02455	SM00422	helix_turn_helix, mercury resistance
BB165_RS02480	SM00342	helix_turn_helix, arabinose operon control protein
BB165_RS02515	SM00530	Helix-turn-helix XRE-family like proteins 
BB165_RS02685	SM00382	ATPases associated with a variety of cellular activities
BB165_RS02690	SM00382	ATPases associated with a variety of cellular activities
BB165_RS02705	SM00729	Elongator protein 3, MiaB family, Radical SAM
BB165_RS02705	SM00876	Biotin and Thiamin Synthesis associated domain
BB165_RS02725	SM00478	endonuclease III
BB165_RS02745	SM00450	Rhodanese Homology Domain
BB165_RS02750	SM00838	Elongation factor G C-terminus
BB165_RS02775	SM00842	Cell division protein FtsA
BB165_RS02780	SM00864	Tubulin/FtsZ family, GTPase domain
BB165_RS02780	SM00865	Tubulin/FtsZ family, C-terminal domain
BB165_RS02800	SM00363	S4 RNA-binding domain
BB165_RS02825	SM00382	ATPases associated with a variety of cellular activities
BB165_RS02825	SM01086	C-terminal, D2-small domain, of ClpB protein
BB165_RS02840	SM00382	ATPases associated with a variety of cellular activities
BB165_RS02875	SM00363	S4 RNA-binding domain
BB165_RS02905	SM00411	bacterial (prokaryotic) histone like domain
BB165_RS02940	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BB165_RS02950	SM00831	Cation transporter/ATPase, N-terminus
BB165_RS02970	SM00937	BB165_RS02970
BB165_RS02975	SM00382	ATPases associated with a variety of cellular activities
BB165_RS02990	SM00849	Metallo-beta-lactamase superfamily
BB165_RS03000	SM00479	BB165_RS03000
BB165_RS03000	SM00491	BB165_RS03000
BB165_RS03075	SM00830	Chorismate mutase type II
BB165_RS03125	SM00382	ATPases associated with a variety of cellular activities
BB165_RS03135	SM00448	cheY-homologous receiver domain
BB165_RS03135	SM00862	Transcriptional regulatory protein, C terminal
BB165_RS03170	SM00387	Histidine kinase-like ATPases
BB165_RS03170	SM00433	TopoisomeraseII
BB165_RS03195	SM01192	BB165_RS03195
BB165_RS03195	SM01193	BB165_RS03195
BB165_RS03200	SM00892	DNA/RNA non-specific endonuclease
BB165_RS03335	SM00382	ATPases associated with a variety of cellular activities
BB165_RS03360	SM00822	BB165_RS03360
BB165_RS03375	SM00382	ATPases associated with a variety of cellular activities
BB165_RS03395	SM00825	Beta-ketoacyl synthase
BB165_RS03425	SM00382	ATPases associated with a variety of cellular activities
BB165_RS03435	SM00892	DNA/RNA non-specific endonuclease
BB165_RS03445	SM00382	ATPases associated with a variety of cellular activities
BB165_RS03490	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BB165_RS03490	SM00895	BB165_RS03490
BB165_RS03520	SM00354	helix_turn _helix lactose operon repressor
BB165_RS03525	SM00642	Alpha-amylase domain
BB165_RS03540	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
BB165_RS03545	SM00448	cheY-homologous receiver domain
BB165_RS03545	SM00862	Transcriptional regulatory protein, C terminal
BB165_RS03570	SM00062	Bacterial periplasmic substrate-binding proteins
BB165_RS03575	SM00382	ATPases associated with a variety of cellular activities
BB165_RS03580	SM00448	cheY-homologous receiver domain
BB165_RS03580	SM00862	Transcriptional regulatory protein, C terminal
BB165_RS03585	SM00091	PAS domain
BB165_RS03585	SM00387	Histidine kinase-like ATPases
BB165_RS03585	SM00388	His Kinase A (phosphoacceptor) domain
BB165_RS03590	SM00849	Metallo-beta-lactamase superfamily
BB165_RS03600	SM00358	Double-stranded RNA binding motif
BB165_RS03600	SM00535	Ribonuclease III family
BB165_RS03605	SM00968	SMC proteins Flexible Hinge Domain
BB165_RS03620	SM00382	ATPases associated with a variety of cellular activities
BB165_RS03620	SM00962	SRP54-type protein, GTPase domain
BB165_RS03620	SM00963	SRP54-type protein, helical bundle domain
BB165_RS03645	SM00316	Ribosomal protein S1-like RNA-binding domain
BB165_RS03645	SM00732	Likely ribonuclease with RNase H fold.
BB165_RS03650	SM00731	SprT homologues.
BB165_RS03745	SM00855	Phosphoglycerate mutase family
BB165_RS03800	SM00855	Phosphoglycerate mutase family
BB165_RS03810	SM00493	BB165_RS03810
BB165_RS03850	SM00382	ATPases associated with a variety of cellular activities
BB165_RS03865	SM00487	DEAD-like helicases superfamily
BB165_RS03865	SM00490	helicase superfamily c-terminal domain
BB165_RS03880	SM00563	Phosphate acyltransferases
BB165_RS03885	SM00278	Helix-hairpin-helix DNA-binding motif class 1
BB165_RS03890	SM00849	Metallo-beta-lactamase superfamily
BB165_RS03900	SM00354	helix_turn _helix lactose operon repressor
BB165_RS03925	SM01061	CAT RNA binding domain
BB165_RS03960	SM00347	helix_turn_helix multiple antibiotic resistance protein
BB165_RS03985	SM00363	S4 RNA-binding domain
BB165_RS04030	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
BB165_RS04050	SM00530	Helix-turn-helix XRE-family like proteins 
BB165_RS04100	SM00487	DEAD-like helicases superfamily
BB165_RS04100	SM00490	helicase superfamily c-terminal domain
BB165_RS04115	SM00382	ATPases associated with a variety of cellular activities
BB165_RS04160	SM00382	ATPases associated with a variety of cellular activities
BB165_RS04200	SM00116	Domain in cystathionine beta-synthase and other proteins.
BB165_RS04225	SM00278	Helix-hairpin-helix DNA-binding motif class 1
BB165_RS04225	SM00292	breast cancer carboxy-terminal domain
BB165_RS04225	SM00532	Ligase N family
BB165_RS04230	SM00046	Diacylglycerol kinase catalytic domain (presumed)
BB165_RS04235	SM00642	Alpha-amylase domain
BB165_RS04240	SM00642	Alpha-amylase domain
BB165_RS04290	SM00382	ATPases associated with a variety of cellular activities
BB165_RS04315	SM00892	DNA/RNA non-specific endonuclease
BB165_RS04330	SM00873	B3/4 domain
BB165_RS04330	SM00874	tRNA synthetase B5 domain
BB165_RS04330	SM00896	Ferredoxin-fold anticodon binding domain
BB165_RS04360	SM00382	ATPases associated with a variety of cellular activities
BB165_RS04370	SM00861	Transketolase, pyrimidine binding domain
BB165_RS04425	SM00729	Elongator protein 3, MiaB family, Radical SAM
BB165_RS04475	SM00562	BB165_RS04475
BB165_RS04480	SM00838	Elongation factor G C-terminus
BB165_RS04485	SM00365	Leucine-rich repeat, SDS22-like subfamily
BB165_RS04485	SM00369	Leucine-rich repeats, typical (most populated) subfamily
BB165_RS04490	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BB165_RS04505	SM00831	Cation transporter/ATPase, N-terminus
BB165_RS04535	SM00382	ATPases associated with a variety of cellular activities
BB165_RS04540	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BB165_RS04545	SM00481	DNA polymerase alpha chain like domain
BB165_RS04585	SM00382	ATPases associated with a variety of cellular activities
BB165_RS04590	SM00062	Bacterial periplasmic substrate-binding proteins
BB165_RS04620	SM00382	ATPases associated with a variety of cellular activities
BB165_RS04645	SM00434	DNA Topoisomerase IV
BB165_RS04690	SM00530	Helix-turn-helix XRE-family like proteins 
BB165_RS04755	SM00889	Elongation factor G, domain IV
BB165_RS04765	SM00530	Helix-turn-helix XRE-family like proteins 
BB165_RS04800	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BB165_RS04800	SM00866	BB165_RS04800
BB165_RS04830	SM00382	ATPases associated with a variety of cellular activities
BB165_RS04840	SM00448	cheY-homologous receiver domain
BB165_RS04840	SM00862	Transcriptional regulatory protein, C terminal
BB165_RS04845	SM00387	Histidine kinase-like ATPases
BB165_RS04875	SM00382	ATPases associated with a variety of cellular activities
BB165_RS04875	SM00962	SRP54-type protein, GTPase domain
BB165_RS04875	SM00963	SRP54-type protein, helical bundle domain
BB165_RS04885	SM00387	Histidine kinase-like ATPases
BB165_RS04885	SM00388	His Kinase A (phosphoacceptor) domain
BB165_RS04890	SM00448	cheY-homologous receiver domain
BB165_RS04890	SM00862	Transcriptional regulatory protein, C terminal
BB165_RS04905	SM00382	ATPases associated with a variety of cellular activities
BB165_RS04910	SM00382	ATPases associated with a variety of cellular activities
BB165_RS04950	SM00904	Riboflavin kinase
BB165_RS04985	SM00382	ATPases associated with a variety of cellular activities
BB165_RS04990	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
BB165_RS04990	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
BB165_RS04990	SM00493	BB165_RS04990
BB165_RS05005	SM00382	ATPases associated with a variety of cellular activities
BB165_RS05020	SM01266	BB165_RS05020
BB165_RS05045	SM00448	cheY-homologous receiver domain
BB165_RS05045	SM00850	LytTr DNA-binding domain
BB165_RS05050	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
BB165_RS05190	SM00851	MGS-like domain
BB165_RS05190	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
BB165_RS05190	SM01209	BB165_RS05190
BB165_RS05195	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
BB165_RS05215	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
BB165_RS05225	SM00382	ATPases associated with a variety of cellular activities
BB165_RS05235	SM00859	Semialdehyde dehydrogenase, NAD binding domain
BB165_RS05245	SM00155	Phospholipase D. Active site motifs.
BB165_RS05265	SM00506	Appr-1"-p processing enzyme
BB165_RS05315	SM00382	ATPases associated with a variety of cellular activities
BB165_RS05320	SM00382	ATPases associated with a variety of cellular activities
BB165_RS05350	SM00937	BB165_RS05350
BB165_RS05405	SM00470	ParB-like nuclease domain
BB165_RS05535	SM00530	Helix-turn-helix XRE-family like proteins 
BB165_RS05565	SM01240	BB165_RS05565
BB165_RS05605	SM00954	Region found in RelA / SpoT proteins
BB165_RS05610	SM01118	BB165_RS05610
BB165_RS05615	SM01400	BB165_RS05615
BB165_RS05630	SM00881	CoA binding domain
BB165_RS05665	SM00342	helix_turn_helix, arabinose operon control protein
BB165_RS05690	SM00382	ATPases associated with a variety of cellular activities
BB165_RS05705	SM00905	Dihydroneopterin aldolase
BB165_RS05770	SM00530	Helix-turn-helix XRE-family like proteins 
BB165_RS05795	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BB165_RS05910	SM00316	Ribosomal protein S1-like RNA-binding domain
BB165_RS05935	SM00434	DNA Topoisomerase IV
BB165_RS05940	SM00387	Histidine kinase-like ATPases
BB165_RS05940	SM00433	TopoisomeraseII
BB165_RS05945	SM01207	BB165_RS05945
BB165_RS05950	SM00986	Uracil DNA glycosylase superfamily
BB165_RS05950	SM00987	UreE urease accessory protein, C-terminal domain 
BB165_RS05975	SM00858	BB165_RS05975
BB165_RS06090	SM00849	Metallo-beta-lactamase superfamily
BB165_RS06095	SM00382	ATPases associated with a variety of cellular activities
BB165_RS06125	SM00028	Tetratricopeptide repeats
BB165_RS06190	SM00728	Clostridial hydrophobic, with a conserved W residue, domain.
BB165_RS06240	SM00642	Alpha-amylase domain
BB165_RS06250	SM00986	Uracil DNA glycosylase superfamily
BB165_RS06250	SM00987	UreE urease accessory protein, C-terminal domain 
BB165_RS06270	SM00465	GIY-YIG type nucleases (URI domain)
BB165_RS06340	SM00479	BB165_RS06340
BB165_RS06340	SM00497	Intron encoded nuclease repeat motif
BB165_RS06415	SM00530	Helix-turn-helix XRE-family like proteins 
BB165_RS06440	SM01061	CAT RNA binding domain
BB165_RS06445	SM01133	BB165_RS06445
BB165_RS06465	SM00420	helix_turn_helix, Deoxyribose operon repressor
BB165_RS06465	SM01134	BB165_RS06465
BB165_RS06505	SM00530	Helix-turn-helix XRE-family like proteins 
BB165_RS06545	SM00487	DEAD-like helicases superfamily
BB165_RS06545	SM00490	helicase superfamily c-terminal domain
BB165_RS06660	SM00382	ATPases associated with a variety of cellular activities
BB165_RS06660	SM01086	C-terminal, D2-small domain, of ClpB protein
BB165_RS06700	SM00382	ATPases associated with a variety of cellular activities
BB165_RS06700	SM00994	ClpX C4-type zinc finger
BB165_RS06700	SM01086	C-terminal, D2-small domain, of ClpB protein
BB165_RS06740	SM00046	Diacylglycerol kinase catalytic domain (presumed)
BB165_RS06775	SM00387	Histidine kinase-like ATPases
BB165_RS06775	SM00388	His Kinase A (phosphoacceptor) domain
BB165_RS06780	SM00448	cheY-homologous receiver domain
BB165_RS06780	SM00862	Transcriptional regulatory protein, C terminal
BB165_RS06785	SM00954	Region found in RelA / SpoT proteins
BB165_RS06790	SM00382	ATPases associated with a variety of cellular activities
BB165_RS06795	SM00382	ATPases associated with a variety of cellular activities
BB165_RS06800	SM00347	helix_turn_helix multiple antibiotic resistance protein
BB165_RS06815	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
BB165_RS06825	SM00382	ATPases associated with a variety of cellular activities
BB165_RS06830	SM00382	ATPases associated with a variety of cellular activities
BB165_RS06840	SM00382	ATPases associated with a variety of cellular activities
BB165_RS06880	SM00420	helix_turn_helix, Deoxyribose operon repressor
BB165_RS06880	SM01134	BB165_RS06880
BB165_RS06890	SM00287	Bacterial SH3 domain homologues
BB165_RS06950	SM00382	ATPases associated with a variety of cellular activities
BB165_RS06960	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
BB165_RS06965	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
BB165_RS06975	SM00363	S4 RNA-binding domain
BB165_RS07005	SM00854	Bacterial capsule synthesis protein PGA_cap
BB165_RS07010	SM00981	BB165_RS07010
BB165_RS07080	SM00257	Lysin motif
BB165_RS07110	SM00382	ATPases associated with a variety of cellular activities
BB165_RS07135	SM01131	BB165_RS07135
BB165_RS07145	SM01091	Transporter associated domain
BB165_RS07155	SM00729	Elongator protein 3, MiaB family, Radical SAM
BB165_RS07160	SM00014	Acid phosphatase homologues
BB165_RS07190	SM00327	von Willebrand factor (vWF) type A domain
BB165_RS07290	SM00400	zinc finger
BB165_RS07290	SM00493	BB165_RS07290
BB165_RS07310	SM00062	Bacterial periplasmic substrate-binding proteins
BB165_RS07310	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
BB165_RS07325	SM00450	Rhodanese Homology Domain
BB165_RS07350	SM00354	helix_turn _helix lactose operon repressor
BB165_RS07395	SM00957	SecA DEAD-like domain
BB165_RS07395	SM00958	SecA preprotein cross-linking domain
BB165_RS07460	SM00487	DEAD-like helicases superfamily
BB165_RS07460	SM00490	helicase superfamily c-terminal domain
BB165_RS07470	SM00062	Bacterial periplasmic substrate-binding proteins
BB165_RS07470	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
BB165_RS07475	SM00382	ATPases associated with a variety of cellular activities
BB165_RS07515	SM00363	S4 RNA-binding domain
BB165_RS07550	SM00316	Ribosomal protein S1-like RNA-binding domain
BB165_RS07550	SM00955	BB165_RS07550
BB165_RS07575	SM00382	ATPases associated with a variety of cellular activities
BB165_RS07585	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
BB165_RS07585	SM01232	BB165_RS07585
BB165_RS07590	SM00530	Helix-turn-helix XRE-family like proteins 
BB165_RS07595	SM00460	Transglutaminase/protease-like homologues
BB165_RS07710	SM00382	ATPases associated with a variety of cellular activities
BB165_RS07715	SM00382	ATPases associated with a variety of cellular activities
BB165_RS07740	SM00649	Ribosomal protein L11/L12
BB165_RS07770	SM00382	ATPases associated with a variety of cellular activities
BB165_RS07770	SM00843	BB165_RS07770
BB165_RS07785	SM00382	ATPases associated with a variety of cellular activities
BB165_RS07795	SM00529	Helix-turn-helix diphteria tox regulatory element
BB165_RS07795	SM00899	BB165_RS07795
BB165_RS07995	SM00116	Domain in cystathionine beta-synthase and other proteins.
BB165_RS08000	SM00382	ATPases associated with a variety of cellular activities
BB165_RS08005	SM00382	ATPases associated with a variety of cellular activities
BB165_RS08065	SM01234	BB165_RS08065
BB165_RS08070	SM00363	S4 RNA-binding domain
BB165_RS08135	SM00967	RNA 2'-O ribose methyltransferase substrate binding
BB165_RS08155	SM00062	Bacterial periplasmic substrate-binding proteins
BB165_RS08195	SM00487	DEAD-like helicases superfamily
BB165_RS08195	SM00490	helicase superfamily c-terminal domain
BB165_RS08220	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BB165_RS08220	SM00387	Histidine kinase-like ATPases
BB165_RS08220	SM00388	His Kinase A (phosphoacceptor) domain
BB165_RS08225	SM00448	cheY-homologous receiver domain
BB165_RS08225	SM00862	Transcriptional regulatory protein, C terminal
BB165_RS08265	SM00382	ATPases associated with a variety of cellular activities
BB165_RS08285	SM00829	Enoylreductase
BB165_RS08295	SM00382	ATPases associated with a variety of cellular activities
BB165_RS08295	SM00930	BB165_RS08295
BB165_RS08310	SM00062	Bacterial periplasmic substrate-binding proteins
BB165_RS08350	SM01120	BB165_RS08350
BB165_RS08400	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BB165_RS08410	SM01103	BB165_RS08410
BB165_RS08430	SM00845	GatB domain
BB165_RS08455	SM00116	Domain in cystathionine beta-synthase and other proteins.
BB165_RS08490	SM00870	BB165_RS08490
BB165_RS08505	SM00487	DEAD-like helicases superfamily
BB165_RS08505	SM00490	helicase superfamily c-terminal domain
BB165_RS08515	SM01005	Alanine racemase, C-terminal domain
BB165_RS08530	SM00957	SecA DEAD-like domain
BB165_RS08530	SM00958	SecA preprotein cross-linking domain
BB165_RS08550	SM00640	Glycosyl hydrolases family 32
BB165_RS08555	SM00354	helix_turn _helix lactose operon repressor
BB165_RS08570	SM00841	Elongation factor P, C-terminal
BB165_RS08570	SM01185	BB165_RS08570
BB165_RS08585	SM00382	ATPases associated with a variety of cellular activities
BB165_RS08590	SM00382	ATPases associated with a variety of cellular activities
BB165_RS08595	SM00382	ATPases associated with a variety of cellular activities
BB165_RS08625	SM00347	helix_turn_helix multiple antibiotic resistance protein
BB165_RS08625	SM00529	Helix-turn-helix diphteria tox regulatory element
BB165_RS08655	SM00382	ATPases associated with a variety of cellular activities
BB165_RS08685	SM00478	endonuclease III
BB165_RS08690	SM00530	Helix-turn-helix XRE-family like proteins 
BB165_RS08700	SM00014	Acid phosphatase homologues
BB165_RS08705	SM00463	Small MutS-related domain
BB165_RS08705	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
BB165_RS08705	SM00534	ATPase domain of DNA mismatch repair MUTS family
BB165_RS08730	SM00382	ATPases associated with a variety of cellular activities
BB165_RS08785	SM00419	helix_turn_helix, cAMP Regulatory protein
BB165_RS08790	SM00939	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
BB165_RS08790	SM00940	X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal
BB165_RS08805	SM00382	ATPases associated with a variety of cellular activities
BB165_RS08810	SM00382	ATPases associated with a variety of cellular activities
BB165_RS08855	SM00422	helix_turn_helix, mercury resistance
BB165_RS08860	SM00479	BB165_RS08860
BB165_RS08915	SM00849	Metallo-beta-lactamase superfamily
BB165_RS08925	SM01230	BB165_RS08925
BB165_RS08930	SM00422	helix_turn_helix, mercury resistance
BB165_RS08950	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
BB165_RS08955	SM00838	Elongation factor G C-terminus
BB165_RS08955	SM00889	Elongation factor G, domain IV
BB165_RS08985	SM00983	Thiamin pyrophosphokinase, vitamin B1 binding domain
BB165_RS09005	SM00650	Ribosomal RNA adenine dimethylases
BB165_RS09015	SM00493	BB165_RS09015
BB165_RS09075	SM00387	Histidine kinase-like ATPases
BB165_RS09075	SM00388	His Kinase A (phosphoacceptor) domain
BB165_RS09080	SM00448	cheY-homologous receiver domain
BB165_RS09080	SM00862	Transcriptional regulatory protein, C terminal
BB165_RS09100	SM00382	ATPases associated with a variety of cellular activities
BB165_RS09155	SM00354	helix_turn _helix lactose operon repressor
BB165_RS09165	SM01007	Class II Aldolase and Adducin N-terminal domain
BB165_RS09175	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
BB165_RS09205	SM00788	Adenylosuccinate synthetase
BB165_RS09255	SM00382	ATPases associated with a variety of cellular activities
BB165_RS09255	SM01086	C-terminal, D2-small domain, of ClpB protein
BB165_RS09330	SM00100	Cyclic nucleotide-monophosphate binding domain
BB165_RS09340	SM00354	helix_turn _helix lactose operon repressor
BB165_RS09405	SM00347	helix_turn_helix multiple antibiotic resistance protein
BB165_RS09410	SM00479	BB165_RS09410
BB165_RS09410	SM00481	DNA polymerase alpha chain like domain
BB165_RS09415	SM00047	Lysozyme subfamily 2
BB165_RS09440	SM01323	BB165_RS09440
BB165_RS09455	SM00919	Malic enzyme, NAD binding domain
BB165_RS09455	SM01274	BB165_RS09455
BB165_RS09470	SM00448	cheY-homologous receiver domain
BB165_RS09480	SM00642	Alpha-amylase domain
BB165_RS09485	SM00382	ATPases associated with a variety of cellular activities
BB165_RS09500	SM01133	BB165_RS09500
BB165_RS09540	SM00420	helix_turn_helix, Deoxyribose operon repressor
BB165_RS09540	SM01134	BB165_RS09540
BB165_RS09565	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BB165_RS09565	SM00954	Region found in RelA / SpoT proteins
BB165_RS09595	SM00342	helix_turn_helix, arabinose operon control protein
BB165_RS09595	SM00448	cheY-homologous receiver domain
BB165_RS09640	SM00382	ATPases associated with a variety of cellular activities
BB165_RS09650	SM00448	cheY-homologous receiver domain
BB165_RS09650	SM00850	LytTr DNA-binding domain
BB165_RS09665	SM00387	Histidine kinase-like ATPases
BB165_RS09665	SM00388	His Kinase A (phosphoacceptor) domain
BB165_RS09670	SM00448	cheY-homologous receiver domain
BB165_RS09670	SM00862	Transcriptional regulatory protein, C terminal
BB165_RS09680	SM00382	ATPases associated with a variety of cellular activities
BB165_RS09720	SM00422	helix_turn_helix, mercury resistance
BB165_RS09750	SM00382	ATPases associated with a variety of cellular activities
BB165_RS09835	SM00382	ATPases associated with a variety of cellular activities
BB165_RS09845	SM00530	Helix-turn-helix XRE-family like proteins 
BB165_RS09850	SM00014	Acid phosphatase homologues
BB165_RS09870	SM00450	Rhodanese Homology Domain
BB165_RS09925	SM00448	cheY-homologous receiver domain
BB165_RS09925	SM00862	Transcriptional regulatory protein, C terminal
BB165_RS09930	SM00387	Histidine kinase-like ATPases
BB165_RS09930	SM00388	His Kinase A (phosphoacceptor) domain
BB165_RS09965	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
BB165_RS09965	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
BB165_RS10005	SM01133	BB165_RS10005
BB165_RS10020	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BB165_RS10035	SM00883	Chaperonin 10 Kd subunit
BB165_RS10040	SM00382	ATPases associated with a variety of cellular activities
BB165_RS10105	SM00732	Likely ribonuclease with RNase H fold.
BB165_RS10120	SM00382	ATPases associated with a variety of cellular activities
BB165_RS10125	SM00852	Probable molybdopterin binding domain
BB165_RS10135	SM00278	Helix-hairpin-helix DNA-binding motif class 1
BB165_RS10145	SM00853	MutL C terminal dimerisation domain
BB165_RS10145	SM01340	BB165_RS10145
BB165_RS10155	SM00357	Cold shock protein domain
BB165_RS10160	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
BB165_RS10160	SM00534	ATPase domain of DNA mismatch repair MUTS family
BB165_RS10170	SM00836	DALR anticodon binding domain
BB165_RS10170	SM01016	Arginyl tRNA synthetase N terminal dom
BB165_RS10220	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
BB165_RS10295	SM00448	cheY-homologous receiver domain
BB165_RS10295	SM00862	Transcriptional regulatory protein, C terminal
BB165_RS10300	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BB165_RS10300	SM00387	Histidine kinase-like ATPases
BB165_RS10300	SM00388	His Kinase A (phosphoacceptor) domain
BB165_RS10320	SM00387	Histidine kinase-like ATPases
BB165_RS10325	SM00448	cheY-homologous receiver domain
BB165_RS10330	SM00382	ATPases associated with a variety of cellular activities
BB165_RS10370	SM00363	S4 RNA-binding domain
BB165_RS10370	SM01390	BB165_RS10370
BB165_RS10395	SM01228	BB165_RS10395
BB165_RS10425	SM00257	Lysin motif
BB165_RS10435	SM00382	ATPases associated with a variety of cellular activities
BB165_RS10440	SM00382	ATPases associated with a variety of cellular activities
BB165_RS10475	SM00530	Helix-turn-helix XRE-family like proteins 
BB165_RS10480	SM00116	Domain in cystathionine beta-synthase and other proteins.
BB165_RS10480	SM01240	BB165_RS10480
BB165_RS10490	SM00419	helix_turn_helix, cAMP Regulatory protein
BB165_RS10495	SM00873	B3/4 domain
BB165_RS10540	SM00382	ATPases associated with a variety of cellular activities
BB165_RS10570	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
BB165_RS10575	SM00470	ParB-like nuclease domain
BB165_RS10580	SM00382	ATPases associated with a variety of cellular activities
BB165_RS10580	SM00760	Bacterial dnaA protein helix-turn-helix domain
BB165_RS10585	SM00480	DNA polymerase III beta subunit
BB165_RS10590	SM00046	Diacylglycerol kinase catalytic domain (presumed)
BB165_RS10615	SM00487	DEAD-like helicases superfamily
BB165_RS10615	SM00490	helicase superfamily c-terminal domain
BB165_RS10615	SM00982	BB165_RS10615
BB165_RS10615	SM01058	CarD-like/TRCF domain
BB165_RS10625	SM00363	S4 RNA-binding domain
BB165_RS10645	SM00977	TilS substrate C-terminal domain
BB165_RS10655	SM00382	ATPases associated with a variety of cellular activities
