locus-tag class description HQ611_RS00005 PF00308 Bacterial dnaA protein HQ611_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix HQ611_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain HQ611_RS00010 PF02767 DNA polymerase III beta subunit, central domain HQ611_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain HQ611_RS00030 PF01926 50S ribosome-binding GTPase HQ611_RS00030 PF06071 Protein of unknown function (DUF933) HQ611_RS00035 PF01195 Peptidyl-tRNA hydrolase HQ611_RS00040 PF02559 CarD-like/TRCF domain HQ611_RS00040 PF00270 DEAD/DEAH box helicase HQ611_RS00040 PF00271 Helicase conserved C-terminal domain HQ611_RS00040 PF03461 TRCF domain HQ611_RS00040 PF17757 UvrB interaction domain HQ611_RS00045 PF01479 S4 domain HQ611_RS00065 PF01171 PP-loop family HQ611_RS00070 PF00156 Phosphoribosyl transferase domain HQ611_RS00075 PF00004 ATPase family associated with various cellular activities (AAA) HQ611_RS00075 PF17862 AAA+ lid domain HQ611_RS00075 PF06480 FtsH Extracellular HQ611_RS00075 PF01434 Peptidase family M41 HQ611_RS00255 PF14572 Phosphoribosyl synthetase-associated domain HQ611_RS00255 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase HQ611_RS00260 PF00155 Aminotransferase class I and II HQ611_RS00265 PF02565 Recombination protein O C terminal HQ611_RS00265 PF11967 Recombination protein O N terminal HQ611_RS00275 PF02504 Fatty acid synthesis protein HQ611_RS00285 PF01259 SAICAR synthetase HQ611_RS00290 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain HQ611_RS00290 PF00586 AIR synthase related protein, N-terminal domain HQ611_RS00290 PF02769 AIR synthase related protein, C-terminal domain HQ611_RS00295 PF13537 Glutamine amidotransferase domain HQ611_RS00295 PF00156 Phosphoribosyl transferase domain HQ611_RS00300 PF00586 AIR synthase related protein, N-terminal domain HQ611_RS00300 PF02769 AIR synthase related protein, C-terminal domain HQ611_RS00305 PF00551 Formyl transferase HQ611_RS00315 PF01808 AICARFT/IMPCHase bienzyme HQ611_RS00315 PF02142 MGS-like domain HQ611_RS00320 PF01476 LysM domain HQ611_RS00320 PF01551 Peptidase family M23 HQ611_RS00330 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase HQ611_RS00340 PF00528 Binding-protein-dependent transport system inner membrane component HQ611_RS00345 PF00528 Binding-protein-dependent transport system inner membrane component HQ611_RS00360 PF00701 Dihydrodipicolinate synthetase family HQ611_RS00365 PF00480 ROK family HQ611_RS00370 PF05448 Acetyl xylan esterase (AXE1) HQ611_RS00380 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain HQ611_RS00380 PF02843 Phosphoribosylglycinamide synthetase, C domain HQ611_RS00380 PF02844 Phosphoribosylglycinamide synthetase, N domain HQ611_RS00385 PF00731 AIR carboxylase HQ611_RS00390 PF02222 ATP-grasp domain HQ611_RS00390 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain HQ611_RS00400 PF10397 Adenylosuccinate lyase C-terminus HQ611_RS00400 PF00206 Lyase HQ611_RS00410 PF05491 RuvB C-terminal winged helix domain HQ611_RS00410 PF17864 RuvB AAA lid domain HQ611_RS00410 PF05496 Holliday junction DNA helicase RuvB P-loop domain HQ611_RS00415 PF01451 Low molecular weight phosphotyrosine protein phosphatase HQ611_RS00425 PF01757 Acyltransferase family HQ611_RS00430 PF00171 Aldehyde dehydrogenase family HQ611_RS00430 PF00465 Iron-containing alcohol dehydrogenase HQ611_RS00435 PF08240 Alcohol dehydrogenase GroES-like domain HQ611_RS00435 PF00107 Zinc-binding dehydrogenase HQ611_RS00440 PF00291 Pyridoxal-phosphate dependent enzyme HQ611_RS00440 PF14821 Threonine synthase N terminus HQ611_RS00445 PF01554 MatE HQ611_RS00450 PF00338 Ribosomal protein S10p/S20e HQ611_RS00455 PF00297 Ribosomal protein L3 HQ611_RS00460 PF00573 Ribosomal protein L4/L1 family HQ611_RS00465 PF00276 Ribosomal protein L23 HQ611_RS00470 PF03947 Ribosomal Proteins L2, C-terminal domain HQ611_RS00470 PF00181 Ribosomal Proteins L2, RNA binding domain HQ611_RS00475 PF00203 Ribosomal protein S19 HQ611_RS00480 PF00237 Ribosomal protein L22p/L17e HQ611_RS00485 PF07650 KH domain HQ611_RS00485 PF00189 Ribosomal protein S3, C-terminal domain HQ611_RS00490 PF00252 Ribosomal protein L16p/L10e HQ611_RS00495 PF00831 Ribosomal L29 protein HQ611_RS00500 PF00366 Ribosomal protein S17 HQ611_RS00505 PF00238 Ribosomal protein L14p/L23e HQ611_RS00510 PF00467 KOW motif HQ611_RS00510 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 HQ611_RS00515 PF00281 Ribosomal protein L5 HQ611_RS00515 PF00673 ribosomal L5P family C-terminus HQ611_RS00520 PF00253 Ribosomal protein S14p/S29e HQ611_RS00525 PF00410 Ribosomal protein S8 HQ611_RS00530 PF00347 Ribosomal protein L6 HQ611_RS00535 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast HQ611_RS00540 PF00333 Ribosomal protein S5, N-terminal domain HQ611_RS00540 PF03719 Ribosomal protein S5, C-terminal domain HQ611_RS00545 PF00327 Ribosomal protein L30p/L7e HQ611_RS00550 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A HQ611_RS00555 PF00344 SecY translocase HQ611_RS00565 PF01176 Translation initiation factor 1A / IF-1 HQ611_RS00570 PF00444 Ribosomal protein L36 HQ611_RS00575 PF00416 Ribosomal protein S13/S18 HQ611_RS00580 PF00411 Ribosomal protein S11 HQ611_RS00585 PF01000 RNA polymerase Rpb3/RpoA insert domain HQ611_RS00585 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain HQ611_RS00585 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain HQ611_RS00590 PF01196 Ribosomal protein L17 HQ611_RS00710 PF11208 Protein of unknown function (DUF2992) HQ611_RS00725 PF02557 D-alanyl-D-alanine carboxypeptidase HQ611_RS00730 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase HQ611_RS00730 PF13457 GW (Gly-Tryp) dipeptide domain HQ611_RS00735 PF01628 HrcA protein C terminal domain HQ611_RS00735 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding HQ611_RS00740 PF01025 GrpE HQ611_RS00745 PF00012 Hsp70 protein HQ611_RS00750 PF00226 DnaJ domain HQ611_RS00750 PF01556 DnaJ C terminal domain HQ611_RS00750 PF00684 DnaJ central domain HQ611_RS00755 PF00155 Aminotransferase class I and II HQ611_RS00755 PF00392 Bacterial regulatory proteins, gntR family HQ611_RS00760 PF01416 tRNA pseudouridine synthase HQ611_RS00765 PF08543 Phosphomethylpyrimidine kinase HQ611_RS00770 PF07155 ECF-type riboflavin transporter, S component HQ611_RS00775 PF04260 Protein of unknown function (DUF436) HQ611_RS00780 PF00924 Mechanosensitive ion channel HQ611_RS00785 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HQ611_RS00785 PF05698 Bacterial trigger factor protein (TF) C-terminus HQ611_RS00785 PF05697 Bacterial trigger factor protein (TF) HQ611_RS00790 PF05066 HB1, ASXL, restriction endonuclease HTH domain HQ611_RS00795 PF06418 CTP synthase N-terminus HQ611_RS00795 PF00117 Glutamine amidotransferase class-I HQ611_RS00810 PF00692 dUTPase HQ611_RS00815 PF18073 Rubredoxin metal binding domain HQ611_RS00820 PF00484 Carbonic anhydrase HQ611_RS00825 PF07992 Pyridine nucleotide-disulphide oxidoreductase HQ611_RS00825 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HQ611_RS00830 PF00749 tRNA synthetases class I (E and Q), catalytic domain HQ611_RS00835 PF13407 Periplasmic binding protein domain HQ611_RS00840 PF02653 Branched-chain amino acid transport system / permease component HQ611_RS00845 PF00005 ABC transporter HQ611_RS00850 PF05025 RbsD / FucU transport protein family HQ611_RS00855 PF00294 pfkB family carbohydrate kinase HQ611_RS00860 PF00356 Bacterial regulatory proteins, lacI family HQ611_RS00865 PF02687 FtsX-like permease family HQ611_RS00870 PF00005 ABC transporter HQ611_RS00875 PF00486 Transcriptional regulatory protein, C terminal HQ611_RS00875 PF00072 Response regulator receiver domain HQ611_RS00880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQ611_RS00880 PF00512 His Kinase A (phospho-acceptor) domain HQ611_RS00885 PF00764 Arginosuccinate synthase HQ611_RS00890 PF14698 Argininosuccinate lyase C-terminal HQ611_RS00890 PF00206 Lyase HQ611_RS00895 PF01116 Fructose-bisphosphate aldolase class-II HQ611_RS00900 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain HQ611_RS00900 PF00056 lactate/malate dehydrogenase, NAD binding domain HQ611_RS00905 PF00830 Ribosomal L28 family HQ611_RS00910 PF03780 Asp23 family, cell envelope-related function HQ611_RS00915 PF13684 Dihydroxyacetone kinase family HQ611_RS00915 PF02734 DAK2 domain HQ611_RS00935 PF00005 ABC transporter HQ611_RS00940 PF00528 Binding-protein-dependent transport system inner membrane component HQ611_RS00950 PF02673 Bacitracin resistance protein BacA HQ611_RS00955 PF05389 Negative regulator of genetic competence (MecA) HQ611_RS00960 PF00953 Glycosyl transferase family 4 HQ611_RS00965 PF00005 ABC transporter HQ611_RS00970 PF01458 Uncharacterized protein family (UPF0051) HQ611_RS00975 PF00266 Aminotransferase class-V HQ611_RS00980 PF01592 NifU-like N terminal domain HQ611_RS00985 PF01458 Uncharacterized protein family (UPF0051) HQ611_RS00990 PF07943 Penicillin-binding protein 5, C-terminal domain HQ611_RS00990 PF00768 D-alanyl-D-alanine carboxypeptidase HQ611_RS00995 PF07943 Penicillin-binding protein 5, C-terminal domain HQ611_RS00995 PF00768 D-alanyl-D-alanine carboxypeptidase HQ611_RS01000 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HQ611_RS01005 PF00528 Binding-protein-dependent transport system inner membrane component HQ611_RS01010 PF00528 Binding-protein-dependent transport system inner membrane component HQ611_RS01010 PF12911 N-terminal TM domain of oligopeptide transport permease C HQ611_RS01015 PF00005 ABC transporter HQ611_RS01015 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HQ611_RS01020 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HQ611_RS01020 PF00005 ABC transporter HQ611_RS01050 PF00288 GHMP kinases N terminal domain HQ611_RS01050 PF08544 GHMP kinases C terminal HQ611_RS01055 PF01047 MarR family HQ611_RS01060 PF00005 ABC transporter HQ611_RS01065 PF00950 ABC 3 transport family HQ611_RS01075 PF01479 S4 domain HQ611_RS01075 PF00579 tRNA synthetases class I (W and Y) HQ611_RS01080 PF00912 Transglycosylase HQ611_RS01080 PF00905 Penicillin binding protein transpeptidase domain HQ611_RS01085 PF04563 RNA polymerase beta subunit HQ611_RS01085 PF04561 RNA polymerase Rpb2, domain 2 HQ611_RS01085 PF10385 RNA polymerase beta subunit external 1 domain HQ611_RS01085 PF00562 RNA polymerase Rpb2, domain 6 HQ611_RS01085 PF04560 RNA polymerase Rpb2, domain 7 HQ611_RS01085 PF04565 RNA polymerase Rpb2, domain 3 HQ611_RS01090 PF00623 RNA polymerase Rpb1, domain 2 HQ611_RS01090 PF04983 RNA polymerase Rpb1, domain 3 HQ611_RS01090 PF04998 RNA polymerase Rpb1, domain 5 HQ611_RS01090 PF05000 RNA polymerase Rpb1, domain 4 HQ611_RS01090 PF04997 RNA polymerase Rpb1, domain 1 HQ611_RS01100 PF00437 Type II/IV secretion system protein HQ611_RS01105 PF00482 Type II secretion system (T2SS), protein F HQ611_RS01140 PF00871 Acetokinase family HQ611_RS01165 PF03807 NADP oxidoreductase coenzyme F420-dependent HQ611_RS01165 PF14748 Pyrroline-5-carboxylate reductase dimerisation HQ611_RS01170 PF05343 M42 glutamyl aminopeptidase HQ611_RS01185 PF00085 Thioredoxin HQ611_RS01190 PF14794 Domain of unknown function (DUF4479) HQ611_RS01190 PF01588 Putative tRNA binding domain HQ611_RS01200 PF00436 Single-strand binding protein family HQ611_RS01205 PF13419 Haloacid dehalogenase-like hydrolase HQ611_RS01210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQ611_RS01210 PF07694 5TMR of 5TMR-LYT HQ611_RS01210 PF06580 Histidine kinase HQ611_RS01215 PF04397 LytTr DNA-binding domain HQ611_RS01215 PF00072 Response regulator receiver domain HQ611_RS01220 PF03788 LrgA family HQ611_RS01225 PF04172 LrgB-like family HQ611_RS01230 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HQ611_RS01235 PF00528 Binding-protein-dependent transport system inner membrane component HQ611_RS01240 PF00528 Binding-protein-dependent transport system inner membrane component HQ611_RS01240 PF12911 N-terminal TM domain of oligopeptide transport permease C HQ611_RS01245 PF00005 ABC transporter HQ611_RS01245 PF12558 ATP-binding cassette cobalt transporter HQ611_RS01250 PF00005 ABC transporter HQ611_RS01255 PF02378 Phosphotransferase system, EIIC HQ611_RS01255 PF00367 phosphotransferase system, EIIB HQ611_RS01260 PF16657 Maltogenic Amylase, C-terminal domain HQ611_RS01260 PF00128 Alpha amylase, catalytic domain HQ611_RS01265 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HQ611_RS01270 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HQ611_RS01275 PF03611 PTS system sugar-specific permease component HQ611_RS01280 PF00456 Transketolase, thiamine diphosphate binding domain HQ611_RS01285 PF02780 Transketolase, C-terminal domain HQ611_RS01285 PF13292 1-deoxy-D-xylulose-5-phosphate synthase HQ611_RS01285 PF02779 Transketolase, pyrimidine binding domain HQ611_RS01290 PF00970 Oxidoreductase FAD-binding domain HQ611_RS01290 PF00111 2Fe-2S iron-sulfur cluster binding domain HQ611_RS01290 PF00175 Oxidoreductase NAD-binding domain HQ611_RS01295 PF00312 Ribosomal protein S15 HQ611_RS01300 PF00575 S1 RNA binding domain HQ611_RS01300 PF03725 3' exoribonuclease family, domain 2 HQ611_RS01300 PF01138 3' exoribonuclease family, domain 1 HQ611_RS01300 PF00013 KH domain HQ611_RS01300 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain HQ611_RS01310 PF06426 Serine acetyltransferase, N-terminal HQ611_RS01310 PF00132 Bacterial transferase hexapeptide (six repeats) HQ611_RS01320 PF01406 tRNA synthetases class I (C) catalytic domain HQ611_RS01320 PF09190 DALR domain HQ611_RS01325 PF00636 Ribonuclease III domain HQ611_RS01330 PF00588 SpoU rRNA Methylase family HQ611_RS01330 PF08032 RNA 2'-O ribose methyltransferase substrate binding HQ611_RS01340 PF02645 Uncharacterised protein, DegV family COG1307 HQ611_RS01350 PF00572 Ribosomal protein L13 HQ611_RS01355 PF00380 Ribosomal protein S9/S16 HQ611_RS01360 PF02899 Phage integrase, N-terminal SAM-like domain HQ611_RS01360 PF00589 Phage integrase family HQ611_RS01395 PF02486 Replication initiation factor HQ611_RS01405 PF01076 Plasmid recombination enzyme HQ611_RS01460 PF01555 DNA methylase HQ611_RS01465 PF04851 Type III restriction enzyme, res subunit HQ611_RS01470 PF06013 Proteins of 100 residues with WXG HQ611_RS01505 PF01381 Helix-turn-helix HQ611_RS01510 PF07690 Major Facilitator Superfamily HQ611_RS01515 PF00528 Binding-protein-dependent transport system inner membrane component HQ611_RS01520 PF04069 Substrate binding domain of ABC-type glycine betaine transport system HQ611_RS01525 PF00528 Binding-protein-dependent transport system inner membrane component HQ611_RS01530 PF00571 CBS domain HQ611_RS01530 PF00005 ABC transporter HQ611_RS01650 PF00958 GMP synthase C terminal domain HQ611_RS01650 PF00117 Glutamine amidotransferase class-I HQ611_RS01650 PF03352 Methyladenine glycosylase HQ611_RS01650 PF13673 Acetyltransferase (GNAT) domain HQ611_RS01650 PF13302 Acetyltransferase (GNAT) domain HQ611_RS01665 PF04297 Putative helix-turn-helix protein, YlxM / p13 like HQ611_RS01675 PF00440 Bacterial regulatory proteins, tetR family HQ611_RS01685 PF00005 ABC transporter HQ611_RS01695 PF03551 Transcriptional regulator PadR-like family HQ611_RS01705 PF01979 Amidohydrolase family HQ611_RS01710 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family HQ611_RS01715 PF02091 Glycyl-tRNA synthetase alpha subunit HQ611_RS01720 PF02525 Flavodoxin-like fold HQ611_RS01725 PF02092 Glycyl-tRNA synthetase beta subunit HQ611_RS01725 PF05746 DALR anticodon binding domain HQ611_RS01730 PF05979 Bacterial protein of unknown function (DUF896) HQ611_RS01740 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HQ611_RS01740 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HQ611_RS01745 PF16901 C-terminal domain of alpha-glycerophosphate oxidase HQ611_RS01745 PF01266 FAD dependent oxidoreductase HQ611_RS01750 PF00230 Major intrinsic protein HQ611_RS01755 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HQ611_RS01755 PF07992 Pyridine nucleotide-disulphide oxidoreductase HQ611_RS01765 PF00456 Transketolase, thiamine diphosphate binding domain HQ611_RS01765 PF02780 Transketolase, C-terminal domain HQ611_RS01765 PF02779 Transketolase, pyrimidine binding domain HQ611_RS01775 PF00005 ABC transporter HQ611_RS01785 PF02378 Phosphotransferase system, EIIC HQ611_RS01785 PF00367 phosphotransferase system, EIIB HQ611_RS01785 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 HQ611_RS01790 PF00696 Amino acid kinase family HQ611_RS01795 PF00171 Aldehyde dehydrogenase family HQ611_RS01800 PF01795 MraW methylase family HQ611_RS01810 PF03793 PASTA domain HQ611_RS01810 PF03717 Penicillin-binding Protein dimerisation domain HQ611_RS01810 PF00905 Penicillin binding protein transpeptidase domain HQ611_RS01815 PF00953 Glycosyl transferase family 4 HQ611_RS01815 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 HQ611_RS01820 PF00270 DEAD/DEAH box helicase HQ611_RS01820 PF00271 Helicase conserved C-terminal domain HQ611_RS01825 PF00497 Bacterial extracellular solute-binding proteins, family 3 HQ611_RS01830 PF00528 Binding-protein-dependent transport system inner membrane component HQ611_RS01835 PF00005 ABC transporter HQ611_RS01845 PF07992 Pyridine nucleotide-disulphide oxidoreductase HQ611_RS01850 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain HQ611_RS01850 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family HQ611_RS01850 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain HQ611_RS01855 PF02540 NAD synthase HQ611_RS01860 PF03051 Peptidase C1-like family HQ611_RS01865 PF00912 Transglycosylase HQ611_RS01865 PF00905 Penicillin binding protein transpeptidase domain HQ611_RS01870 PF03838 Recombination protein U HQ611_RS01875 PF06908 YspA SLOG family HQ611_RS01880 PF05103 DivIVA protein HQ611_RS01890 PF01170 Putative RNA methylase family UPF0020 HQ611_RS01890 PF02926 THUMP domain HQ611_RS01895 PF18041 MapZ extracellular domain 1 HQ611_RS01895 PF18708 MapZ extracellular C-terminal domain 2 HQ611_RS01900 PF02664 S-Ribosylhomocysteinase (LuxS) HQ611_RS01905 PF00013 KH domain HQ611_RS01905 PF01966 HD domain HQ611_RS01905 PF12072 Domain of unknown function (DUF3552) HQ611_RS01910 PF00005 ABC transporter HQ611_RS01920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQ611_RS01920 PF07730 Histidine kinase HQ611_RS01925 PF00196 Bacterial regulatory proteins, luxR family HQ611_RS01925 PF00072 Response regulator receiver domain HQ611_RS01930 PF06736 Protein of unknown function (DUF1211) HQ611_RS01935 PF00625 Guanylate kinase HQ611_RS01940 PF01192 RNA polymerase Rpb6 HQ611_RS01945 PF00271 Helicase conserved C-terminal domain HQ611_RS01945 PF17764 3′ DNA-binding domain (3′BD) HQ611_RS01945 PF18319 PriA DNA helicase Cys-rich region (CRR) domain HQ611_RS01945 PF04851 Type III restriction enzyme, res subunit HQ611_RS01945 PF18074 Primosomal protein N C-terminal domain HQ611_RS01950 PF02911 Formyl transferase, C-terminal domain HQ611_RS01950 PF00551 Formyl transferase HQ611_RS01955 PF01029 NusB family HQ611_RS01955 PF01189 16S rRNA methyltransferase RsmB/F HQ611_RS01965 PF00069 Protein kinase domain HQ611_RS01965 PF03793 PASTA domain HQ611_RS01975 PF07730 Histidine kinase HQ611_RS01975 PF00672 HAMP domain HQ611_RS01975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQ611_RS01980 PF00072 Response regulator receiver domain HQ611_RS01980 PF00196 Bacterial regulatory proteins, luxR family HQ611_RS01985 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD HQ611_RS01990 PF00575 S1 RNA binding domain HQ611_RS01995 PF04055 Radical SAM superfamily HQ611_RS02000 PF08220 DeoR-like helix-turn-helix domain HQ611_RS02000 PF00455 DeoR C terminal sensor domain HQ611_RS02005 PF04198 Putative sugar-binding domain HQ611_RS02005 PF13936 Helix-turn-helix domain HQ611_RS02010 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit HQ611_RS02020 PF02378 Phosphotransferase system, EIIC HQ611_RS02025 PF01228 Glycine radical HQ611_RS02025 PF02901 Pyruvate formate lyase-like HQ611_RS02030 PF00923 Transaldolase/Fructose-6-phosphate aldolase HQ611_RS02035 PF00465 Iron-containing alcohol dehydrogenase HQ611_RS02040 PF00291 Pyridoxal-phosphate dependent enzyme HQ611_RS02045 PF01205 Uncharacterized protein family UPF0029 HQ611_RS02045 PF09186 Domain of unknown function (DUF1949) HQ611_RS02050 PF00271 Helicase conserved C-terminal domain HQ611_RS02050 PF04851 Type III restriction enzyme, res subunit HQ611_RS02060 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus HQ611_RS02060 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein HQ611_RS02090 PF13840 ACT domain HQ611_RS02090 PF00696 Amino acid kinase family HQ611_RS02095 PF13419 Haloacid dehalogenase-like hydrolase HQ611_RS02100 PF00378 Enoyl-CoA hydratase/isomerase HQ611_RS02110 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III HQ611_RS02110 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal HQ611_RS02115 PF00550 Phosphopantetheine attachment site HQ611_RS02120 PF03060 Nitronate monooxygenase HQ611_RS02125 PF00698 Acyl transferase domain HQ611_RS02135 PF00109 Beta-ketoacyl synthase, N-terminal domain HQ611_RS02135 PF02801 Beta-ketoacyl synthase, C-terminal domain HQ611_RS02140 PF00364 Biotin-requiring enzyme HQ611_RS02145 PF07977 FabA-like domain HQ611_RS02150 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HQ611_RS02150 PF00289 Biotin carboxylase, N-terminal domain HQ611_RS02150 PF02785 Biotin carboxylase C-terminal domain HQ611_RS02155 PF17848 Acetyl-coA carboxylase zinc finger domain HQ611_RS02155 PF01039 Carboxyl transferase domain HQ611_RS02160 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit HQ611_RS02170 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HQ611_RS02170 PF02403 Seryl-tRNA synthetase N-terminal domain HQ611_RS02185 PF03613 PTS system mannose/fructose/sorbose family IID component HQ611_RS02190 PF03609 PTS system sorbose-specific iic component HQ611_RS02195 PF03830 PTS system sorbose subfamily IIB component HQ611_RS02195 PF03610 PTS system fructose IIA component HQ611_RS02215 PF00860 Permease family HQ611_RS02220 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE HQ611_RS02225 PF13302 Acetyltransferase (GNAT) domain HQ611_RS02230 PF03816 Cell envelope-related transcriptional attenuator domain HQ611_RS02240 PF01230 HIT domain HQ611_RS02255 PF00005 ABC transporter HQ611_RS02260 PF05975 Bacterial ABC transporter protein EcsB HQ611_RS02270 PF02390 Putative methyltransferase HQ611_RS02280 PF17384 RimP C-terminal SH3 domain HQ611_RS02280 PF02576 RimP N-terminal domain HQ611_RS02285 PF08529 NusA N-terminal domain HQ611_RS02285 PF13184 NusA-like KH domain HQ611_RS02285 PF00575 S1 RNA binding domain HQ611_RS02290 PF04296 Protein of unknown function (DUF448) HQ611_RS02295 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family HQ611_RS02300 PF00009 Elongation factor Tu GTP binding domain HQ611_RS02300 PF04760 Translation initiation factor IF-2, N-terminal region HQ611_RS02300 PF11987 Translation-initiation factor 2 HQ611_RS02305 PF02033 Ribosome-binding factor A HQ611_RS02310 PF07859 alpha/beta hydrolase fold HQ611_RS02315 PF03965 Penicillinase repressor HQ611_RS02320 PF00403 Heavy-metal-associated domain HQ611_RS02330 PF03458 UPF0126 domain HQ611_RS02340 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain HQ611_RS02340 PF00476 DNA polymerase family A HQ611_RS02340 PF01367 5'-3' exonuclease, C-terminal SAM fold HQ611_RS02345 PF13380 CoA binding domain HQ611_RS02350 PF01475 Ferric uptake regulator family HQ611_RS02360 PF00072 Response regulator receiver domain HQ611_RS02360 PF00486 Transcriptional regulatory protein, C terminal HQ611_RS02365 PF00512 His Kinase A (phospho-acceptor) domain HQ611_RS02365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQ611_RS02375 PF01702 Queuine tRNA-ribosyltransferase HQ611_RS02385 PF02632 BioY family HQ611_RS02390 PF12706 Beta-lactamase superfamily domain HQ611_RS02395 PF14437 MafB19-like deaminase HQ611_RS02405 PF00342 Phosphoglucose isomerase HQ611_RS02410 PF01812 5-formyltetrahydrofolate cyclo-ligase family HQ611_RS02415 PF01694 Rhomboid family HQ611_RS02420 PF02608 ABC transporter substrate-binding protein PnrA-like HQ611_RS02425 PF00483 Nucleotidyl transferase HQ611_RS02430 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus HQ611_RS02430 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus HQ611_RS02435 PF00825 Ribonuclease P HQ611_RS02440 PF02096 60Kd inner membrane protein HQ611_RS02485 PF04167 Protein of unknown function (DUF402) HQ611_RS02490 PF02631 RecX family HQ611_RS02495 PF01938 TRAM domain HQ611_RS02495 PF05958 tRNA (Uracil-5-)-methyltransferase HQ611_RS02505 PF13673 Acetyltransferase (GNAT) domain HQ611_RS02510 PF02225 PA domain HQ611_RS02510 PF06280 Fn3-like domain HQ611_RS02510 PF00082 Subtilase family HQ611_RS02515 PF01501 Glycosyl transferase family 8 HQ611_RS02515 PF00535 Glycosyl transferase family 2 HQ611_RS02520 PF00268 Ribonucleotide reductase, small chain HQ611_RS02525 PF07972 NrdI Flavodoxin like HQ611_RS02530 PF02867 Ribonucleotide reductase, barrel domain HQ611_RS02530 PF00317 Ribonucleotide reductase, all-alpha domain HQ611_RS02530 PF08343 Ribonucleotide reductase N-terminal HQ611_RS02565 PF13411 MerR HTH family regulatory protein HQ611_RS02575 PF00248 Aldo/keto reductase family HQ611_RS02580 PF01545 Cation efflux family HQ611_RS02590 PF12833 Helix-turn-helix domain HQ611_RS02595 PF04650 YSIRK type signal peptide HQ611_RS02595 PF08829 Alpha C protein N terminal HQ611_RS02595 PF17480 AlphaC C-terminal HQ611_RS02595 PF00746 LPXTG cell wall anchor motif HQ611_RS02625 PF14659 Phage integrase, N-terminal SAM-like domain HQ611_RS02625 PF00589 Phage integrase family HQ611_RS02660 PF13302 Acetyltransferase (GNAT) domain HQ611_RS02670 PF00133 tRNA synthetases class I (I, L, M and V) HQ611_RS02670 PF08264 Anticodon-binding domain of tRNA HQ611_RS02670 PF10458 Valyl tRNA synthetase tRNA binding arm HQ611_RS02680 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HQ611_RS02680 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HQ611_RS02690 PF04237 YjbR HQ611_RS02695 PF03590 Aspartate-ammonia ligase HQ611_RS02715 PF01467 Cytidylyltransferase-like HQ611_RS02720 PF13180 PDZ domain HQ611_RS02720 PF05362 Lon protease (S16) C-terminal proteolytic domain HQ611_RS02725 PF02872 5'-nucleotidase, C-terminal domain HQ611_RS02730 PF06265 Protein of unknown function (DUF1027) HQ611_RS02735 PF04055 Radical SAM superfamily HQ611_RS02745 PF00005 ABC transporter HQ611_RS02745 PF00664 ABC transporter transmembrane region HQ611_RS02750 PF00664 ABC transporter transmembrane region HQ611_RS02750 PF00005 ABC transporter HQ611_RS02755 PF00117 Glutamine amidotransferase class-I HQ611_RS02760 PF02632 BioY family HQ611_RS02765 PF04055 Radical SAM superfamily HQ611_RS02765 PF06968 Biotin and Thiamin Synthesis associated domain HQ611_RS02775 PF02803 Thiolase, C-terminal domain HQ611_RS02775 PF00108 Thiolase, N-terminal domain HQ611_RS02785 PF10576 Iron-sulfur binding domain of endonuclease III HQ611_RS02785 PF00633 Helix-hairpin-helix motif HQ611_RS02785 PF00730 HhH-GPD superfamily base excision DNA repair protein HQ611_RS02800 PF00480 ROK family HQ611_RS02805 PF00581 Rhodanese-like domain HQ611_RS02810 PF00679 Elongation factor G C-terminus HQ611_RS02810 PF14492 Elongation Factor G, domain II HQ611_RS02810 PF00009 Elongation factor Tu GTP binding domain HQ611_RS02810 PF03144 Elongation factor Tu domain 2 HQ611_RS02820 PF02875 Mur ligase family, glutamate ligase domain HQ611_RS02820 PF08245 Mur ligase middle domain HQ611_RS02825 PF04101 Glycosyltransferase family 28 C-terminal domain HQ611_RS02825 PF03033 Glycosyltransferase family 28 N-terminal domain HQ611_RS02830 PF08478 POTRA domain, FtsQ-type HQ611_RS02835 PF11983 Membrane-attachment and polymerisation-promoting switch HQ611_RS02835 PF02491 SHS2 domain inserted in FTSA HQ611_RS02840 PF12327 FtsZ family, C-terminal domain HQ611_RS02840 PF00091 Tubulin/FtsZ family, GTPase domain HQ611_RS02845 PF01168 Alanine racemase, N-terminal domain HQ611_RS02850 PF04472 Cell division protein SepF HQ611_RS02855 PF02325 YGGT family HQ611_RS02860 PF01479 S4 domain HQ611_RS02860 PF17774 Putative RNA-binding domain in YlmH HQ611_RS02865 PF05103 DivIVA protein HQ611_RS02870 PF08264 Anticodon-binding domain of tRNA HQ611_RS02870 PF00133 tRNA synthetases class I (I, L, M and V) HQ611_RS02880 PF00293 NUDIX domain HQ611_RS02885 PF00004 ATPase family associated with various cellular activities (AAA) HQ611_RS02885 PF17871 AAA lid domain HQ611_RS02885 PF10431 C-terminal, D2-small domain, of ClpB protein HQ611_RS02885 PF07724 AAA domain (Cdc48 subfamily) HQ611_RS02890 PF08796 Protein of unknown function (DUF1797) HQ611_RS02895 PF00528 Binding-protein-dependent transport system inner membrane component HQ611_RS02900 PF00005 ABC transporter HQ611_RS02905 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HQ611_RS02905 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HQ611_RS02905 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HQ611_RS02905 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HQ611_RS02910 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain HQ611_RS02910 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain HQ611_RS02915 PF01256 Carbohydrate kinase HQ611_RS02920 PF02601 Exonuclease VII, large subunit HQ611_RS02920 PF13742 OB-fold nucleic acid binding domain HQ611_RS02925 PF02609 Exonuclease VII small subunit HQ611_RS02930 PF00348 Polyprenyl synthetase HQ611_RS02935 PF01479 S4 domain HQ611_RS02935 PF01728 FtsJ-like methyltransferase HQ611_RS02940 PF01316 Arginine repressor, DNA binding domain HQ611_RS02940 PF02863 Arginine repressor, C-terminal domain HQ611_RS02945 PF13476 AAA domain HQ611_RS02950 PF02645 Uncharacterised protein, DegV family COG1307 HQ611_RS02955 PF13472 GDSL-like Lipase/Acylhydrolase family HQ611_RS02965 PF00216 Bacterial DNA-binding protein HQ611_RS02975 PF01180 Dihydroorotate dehydrogenase HQ611_RS02985 PF02388 FemAB family HQ611_RS02990 PF02388 FemAB family HQ611_RS03000 PF01966 HD domain HQ611_RS03010 PF00689 Cation transporting ATPase, C-terminus HQ611_RS03010 PF00690 Cation transporter/ATPase, N-terminus HQ611_RS03020 PF06874 Firmicute fructose-1,6-bisphosphatase HQ611_RS03025 PF08331 Domain of unknown function (DUF1730) HQ611_RS03035 PF00005 ABC transporter HQ611_RS03040 PF18075 FtsX extracellular domain HQ611_RS03040 PF02687 FtsX-like permease family HQ611_RS03050 PF00753 Metallo-beta-lactamase superfamily HQ611_RS03060 PF04851 Type III restriction enzyme, res subunit HQ611_RS03060 PF00929 Exonuclease HQ611_RS03060 PF13307 Helicase C-terminal domain HQ611_RS03065 PF00155 Aminotransferase class I and II HQ611_RS03070 PF01336 OB-fold nucleic acid binding domain HQ611_RS03070 PF00152 tRNA synthetases class II (D, K and N) HQ611_RS03080 PF01156 Inosine-uridine preferring nucleoside hydrolase HQ611_RS03090 PF03668 P-loop ATPase protein family HQ611_RS03095 PF01933 Uncharacterised protein family UPF0052 HQ611_RS03100 PF10298 WhiA N-terminal LAGLIDADG-like domain HQ611_RS03100 PF14527 WhiA LAGLIDADG-like domain HQ611_RS03100 PF02650 WhiA C-terminal HTH domain HQ611_RS03105 PF03577 Peptidase family C69 HQ611_RS03110 PF01297 Zinc-uptake complex component A periplasmic HQ611_RS03110 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment HQ611_RS03115 PF01197 Ribosomal protein L31 HQ611_RS03120 PF01368 DHH family HQ611_RS03120 PF02272 DHHA1 domain HQ611_RS03125 PF00962 Adenosine/AMP deaminase HQ611_RS03130 PF00258 Flavodoxin HQ611_RS03135 PF00793 DAHP synthetase I family HQ611_RS03135 PF01817 Chorismate mutase type II HQ611_RS03140 PF00654 Voltage gated chloride channel HQ611_RS03145 PF01245 Ribosomal protein L19 HQ611_RS03180 PF00005 ABC transporter HQ611_RS03190 PF00072 Response regulator receiver domain HQ611_RS03190 PF00486 Transcriptional regulatory protein, C terminal HQ611_RS03195 PF00512 His Kinase A (phospho-acceptor) domain HQ611_RS03195 PF00672 HAMP domain HQ611_RS03195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQ611_RS03205 PF05532 CsbD-like HQ611_RS03215 PF01098 Cell cycle protein HQ611_RS03225 PF01751 Toprim domain HQ611_RS03225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQ611_RS03225 PF00204 DNA gyrase B HQ611_RS03225 PF00986 DNA gyrase B subunit, carboxyl terminus HQ611_RS03230 PF06160 Septation ring formation regulator, EzrA HQ611_RS03250 PF00113 Enolase, C-terminal TIM barrel domain HQ611_RS03250 PF03952 Enolase, N-terminal domain HQ611_RS03260 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) HQ611_RS03265 PF01202 Shikimate kinase HQ611_RS03270 PF03816 Cell envelope-related transcriptional attenuator domain HQ611_RS03275 PF05958 tRNA (Uracil-5-)-methyltransferase HQ611_RS03285 PF02920 DNA binding domain of tn916 integrase HQ611_RS03285 PF00589 Phage integrase family HQ611_RS03290 PF09035 Excisionase from transposon Tn916 HQ611_RS03315 PF01526 Tn3 transposase DDE domain HQ611_RS03315 PF13700 Domain of unknown function (DUF4158) HQ611_RS03320 PF02796 Helix-turn-helix domain of resolvase HQ611_RS03320 PF00239 Resolvase, N terminal domain HQ611_RS03325 PF00398 Ribosomal RNA adenine dimethylase HQ611_RS03330 PF06308 23S rRNA methylastransferase leader peptide (ErmCL) HQ611_RS03345 PF00679 Elongation factor G C-terminus HQ611_RS03345 PF03764 Elongation factor G, domain IV HQ611_RS03345 PF00009 Elongation factor Tu GTP binding domain HQ611_RS03345 PF14492 Elongation Factor G, domain II HQ611_RS03360 PF00877 NlpC/P60 family HQ611_RS03390 PF02486 Replication initiation factor HQ611_RS03390 PF18106 Rolling Circle replication initiation protein N-terminal domain HQ611_RS03445 PF01612 3'-5' exonuclease HQ611_RS03445 PF00476 DNA polymerase family A HQ611_RS03445 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain HQ611_RS03445 PF01367 5'-3' exonuclease, C-terminal SAM fold HQ611_RS03495 PF00438 S-adenosylmethionine synthetase, N-terminal domain HQ611_RS03495 PF02772 S-adenosylmethionine synthetase, central domain HQ611_RS03495 PF02773 S-adenosylmethionine synthetase, C-terminal domain HQ611_RS03510 PF01555 DNA methylase HQ611_RS03515 PF00145 C-5 cytosine-specific DNA methylase HQ611_RS03555 PF00574 Clp protease HQ611_RS03615 PF05105 Bacteriophage holin family HQ611_RS03635 PF07508 Recombinase HQ611_RS03635 PF13408 Recombinase zinc beta ribbon domain HQ611_RS03640 PF00239 Resolvase, N terminal domain HQ611_RS03640 PF02796 Helix-turn-helix domain of resolvase HQ611_RS03650 PF00069 Protein kinase domain HQ611_RS03650 PF00211 Adenylate and Guanylate cyclase catalytic domain HQ611_RS03660 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) HQ611_RS03680 PF04650 YSIRK type signal peptide HQ611_RS03680 PF00746 LPXTG cell wall anchor motif HQ611_RS03680 PF17480 AlphaC C-terminal HQ611_RS03680 PF08829 Alpha C protein N terminal HQ611_RS03775 PF00144 Beta-lactamase HQ611_RS03780 PF00005 ABC transporter HQ611_RS03810 PF00550 Phosphopantetheine attachment site HQ611_RS03815 PF07977 FabA-like domain HQ611_RS03820 PF00005 ABC transporter HQ611_RS03835 PF01571 Aminomethyltransferase folate-binding domain HQ611_RS03835 PF08669 Glycine cleavage T-protein C-terminal barrel domain HQ611_RS03840 PF00109 Beta-ketoacyl synthase, N-terminal domain HQ611_RS03840 PF02801 Beta-ketoacyl synthase, C-terminal domain HQ611_RS03860 PF06696 Streptococcal surface antigen repeat HQ611_RS03860 PF00746 LPXTG cell wall anchor motif HQ611_RS03860 PF08363 Glucan-binding protein C HQ611_RS03860 PF18652 Adhesin P1 N-terminal domain HQ611_RS03860 PF17998 Cell surface antigen I/II C2 terminal domain HQ611_RS03860 PF16364 Cell surface antigen C-terminus HQ611_RS03865 PF06280 Fn3-like domain HQ611_RS03865 PF00082 Subtilase family HQ611_RS03865 PF02225 PA domain HQ611_RS03865 PF00746 LPXTG cell wall anchor motif HQ611_RS03920 PF00005 ABC transporter HQ611_RS03930 PF01223 DNA/RNA non-specific endonuclease HQ611_RS03935 PF09335 SNARE associated Golgi protein HQ611_RS03940 PF00005 ABC transporter HQ611_RS03945 PF03649 Uncharacterised protein family (UPF0014) HQ611_RS03955 PF03466 LysR substrate binding domain HQ611_RS03955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HQ611_RS03965 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HQ611_RS03965 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HQ611_RS03975 PF00294 pfkB family carbohydrate kinase HQ611_RS03980 PF02836 Glycosyl hydrolases family 2, TIM barrel domain HQ611_RS03980 PF02837 Glycosyl hydrolases family 2, sugar binding domain HQ611_RS03980 PF00703 Glycosyl hydrolases family 2 HQ611_RS03985 PF00392 Bacterial regulatory proteins, gntR family HQ611_RS03985 PF07729 FCD domain HQ611_RS03990 PF01081 KDPG and KHG aldolase HQ611_RS03995 PF02614 Glucuronate isomerase HQ611_RS04000 PF03786 D-mannonate dehydratase (UxuA) HQ611_RS04005 PF00106 short chain dehydrogenase HQ611_RS04015 PF00933 Glycosyl hydrolase family 3 N terminal domain HQ611_RS04020 PF01321 Creatinase/Prolidase N-terminal domain HQ611_RS04020 PF00557 Metallopeptidase family M24 HQ611_RS04025 PF00356 Bacterial regulatory proteins, lacI family HQ611_RS04030 PF00128 Alpha amylase, catalytic domain HQ611_RS04030 PF09154 Domain of unknown function (DUF1939) HQ611_RS04035 PF13439 Glycosyltransferase Family 4 HQ611_RS04035 PF00534 Glycosyl transferases group 1 HQ611_RS04040 PF13439 Glycosyltransferase Family 4 HQ611_RS04040 PF00534 Glycosyl transferases group 1 HQ611_RS04045 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HQ611_RS04045 PF02824 TGS domain HQ611_RS04045 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HQ611_RS04045 PF03129 Anticodon binding domain HQ611_RS04050 PF00072 Response regulator receiver domain HQ611_RS04050 PF00486 Transcriptional regulatory protein, C terminal HQ611_RS04060 PF03413 Peptidase propeptide and YPEB domain HQ611_RS04065 PF00528 Binding-protein-dependent transport system inner membrane component HQ611_RS04070 PF00528 Binding-protein-dependent transport system inner membrane component HQ611_RS04075 PF00497 Bacterial extracellular solute-binding proteins, family 3 HQ611_RS04080 PF00005 ABC transporter HQ611_RS04085 PF00486 Transcriptional regulatory protein, C terminal HQ611_RS04085 PF00072 Response regulator receiver domain HQ611_RS04090 PF00672 HAMP domain HQ611_RS04090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQ611_RS04090 PF00512 His Kinase A (phospho-acceptor) domain HQ611_RS04090 PF13426 PAS domain HQ611_RS04095 PF00753 Metallo-beta-lactamase superfamily HQ611_RS04100 PF04304 Protein of unknown function (DUF454) HQ611_RS04105 PF14622 Ribonuclease-III-like HQ611_RS04105 PF00035 Double-stranded RNA binding motif HQ611_RS04110 PF02463 RecF/RecN/SMC N terminal domain HQ611_RS04110 PF06470 SMC proteins Flexible Hinge Domain HQ611_RS04125 PF00448 SRP54-type protein, GTPase domain HQ611_RS04125 PF02881 SRP54-type protein, helical bundle domain HQ611_RS04130 PF09323 Domain of unknown function (DUF1980) HQ611_RS04135 PF03773 Predicted permease HQ611_RS04150 PF00575 S1 RNA binding domain HQ611_RS04150 PF17674 HHH domain HQ611_RS04150 PF09371 Tex-like protein N-terminal domain HQ611_RS04150 PF16921 Tex protein YqgF-like domain HQ611_RS04155 PF10263 SprT-like family HQ611_RS04160 PF04024 PspC domain HQ611_RS04165 PF07475 HPr Serine kinase C-terminal domain HQ611_RS04165 PF02603 HPr Serine kinase N terminus HQ611_RS04170 PF01790 Prolipoprotein diacylglyceryl transferase HQ611_RS04180 PF12732 YtxH-like protein HQ611_RS04195 PF16325 Peptidase family U32 C-terminal domain HQ611_RS04195 PF01136 Peptidase family U32 HQ611_RS04200 PF02229 Transcriptional Coactivator p15 (PC4) HQ611_RS04210 PF01566 Natural resistance-associated macrophage protein HQ611_RS04215 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region HQ611_RS04215 PF01872 RibD C-terminal domain HQ611_RS04220 PF00677 Lumazine binding domain HQ611_RS04225 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase HQ611_RS04225 PF00925 GTP cyclohydrolase II HQ611_RS04230 PF00885 6,7-dimethyl-8-ribityllumazine synthase HQ611_RS04235 PF00152 tRNA synthetases class II (D, K and N) HQ611_RS04235 PF01336 OB-fold nucleic acid binding domain HQ611_RS04250 PF04073 Aminoacyl-tRNA editing domain HQ611_RS04255 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family HQ611_RS04275 PF08439 Oligopeptidase F HQ611_RS04275 PF01432 Peptidase family M3 HQ611_RS04280 PF00311 Phosphoenolpyruvate carboxylase HQ611_RS04285 PF01098 Cell cycle protein HQ611_RS04290 PF03143 Elongation factor Tu C-terminal domain HQ611_RS04290 PF03144 Elongation factor Tu domain 2 HQ611_RS04290 PF00009 Elongation factor Tu GTP binding domain HQ611_RS04295 PF00121 Triosephosphate isomerase HQ611_RS04300 PF00300 Histidine phosphatase superfamily (branch 1) HQ611_RS04305 PF03717 Penicillin-binding Protein dimerisation domain HQ611_RS04305 PF00905 Penicillin binding protein transpeptidase domain HQ611_RS04310 PF02132 RecR protein HQ611_RS04310 PF13662 Toprim domain HQ611_RS04315 PF07478 D-ala D-ala ligase C-terminus HQ611_RS04315 PF01820 D-ala D-ala ligase N-terminus HQ611_RS04320 PF02875 Mur ligase family, glutamate ligase domain HQ611_RS04320 PF01225 Mur ligase family, catalytic domain HQ611_RS04320 PF08245 Mur ligase middle domain HQ611_RS04325 PF07690 Major Facilitator Superfamily HQ611_RS04340 PF00009 Elongation factor Tu GTP binding domain HQ611_RS04340 PF03144 Elongation factor Tu domain 2 HQ611_RS04340 PF16658 Class II release factor RF3, C-terminal domain HQ611_RS04345 PF08000 Bacterial PH domain HQ611_RS04350 PF00005 ABC transporter HQ611_RS04350 PF09383 NIL domain HQ611_RS04355 PF00528 Binding-protein-dependent transport system inner membrane component HQ611_RS04360 PF03180 NLPA lipoprotein HQ611_RS04365 PF00271 Helicase conserved C-terminal domain HQ611_RS04365 PF00270 DEAD/DEAH box helicase HQ611_RS04370 PF01541 GIY-YIG catalytic domain HQ611_RS04375 PF05175 Methyltransferase small domain HQ611_RS04380 PF01553 Acyltransferase HQ611_RS04385 PF10531 SLBB domain HQ611_RS04390 PF00753 Metallo-beta-lactamase superfamily HQ611_RS04390 PF13567 Domain of unknown function (DUF4131) HQ611_RS04390 PF03772 Competence protein HQ611_RS04400 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family HQ611_RS04400 PF00356 Bacterial regulatory proteins, lacI family HQ611_RS04405 PF07859 alpha/beta hydrolase fold HQ611_RS04405 PF00934 PE family HQ611_RS04410 PF01209 ubiE/COQ5 methyltransferase family HQ611_RS04420 PF02777 Iron/manganese superoxide dismutases, C-terminal domain HQ611_RS04420 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain HQ611_RS04425 PF03123 CAT RNA binding domain HQ611_RS04425 PF00874 PRD domain HQ611_RS04430 PF02378 Phosphotransferase system, EIIC HQ611_RS04430 PF00367 phosphotransferase system, EIIB HQ611_RS04430 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 HQ611_RS04435 PF00232 Glycosyl hydrolase family 1 HQ611_RS04440 PF17853 GGDEF-like domain HQ611_RS04440 PF13556 PucR C-terminal helix-turn-helix domain HQ611_RS04440 PF05651 Putative sugar diacid recognition HQ611_RS04445 PF02595 Glycerate kinase family HQ611_RS04450 PF02447 GntP family permease HQ611_RS04460 PF01047 MarR family HQ611_RS04465 PF02547 Queuosine biosynthesis protein HQ611_RS04475 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase HQ611_RS04480 PF13409 Glutathione S-transferase, N-terminal domain HQ611_RS04485 PF00849 RNA pseudouridylate synthase HQ611_RS04485 PF01479 S4 domain HQ611_RS04500 PF01432 Peptidase family M3 HQ611_RS04500 PF08439 Oligopeptidase F HQ611_RS04510 PF01596 O-methyltransferase HQ611_RS04515 PF13145 PPIC-type PPIASE domain HQ611_RS04520 PF04525 LURP-one-related HQ611_RS04525 PF02272 DHHA1 domain HQ611_RS04525 PF01411 tRNA synthetases class II (A) HQ611_RS04525 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HQ611_RS04530 PF04474 Protein of unknown function (DUF554) HQ611_RS04535 PF08437 Glycosyl transferase family 8 C-terminal HQ611_RS04535 PF01501 Glycosyl transferase family 8 HQ611_RS04550 PF01381 Helix-turn-helix HQ611_RS04560 PF09515 Thiamine transporter protein (Thia_YuaJ) HQ611_RS04565 PF00268 Ribonucleotide reductase, small chain HQ611_RS04570 PF08343 Ribonucleotide reductase N-terminal HQ611_RS04570 PF00317 Ribonucleotide reductase, all-alpha domain HQ611_RS04570 PF02867 Ribonucleotide reductase, barrel domain HQ611_RS04575 PF00462 Glutaredoxin HQ611_RS04580 PF00381 PTS HPr component phosphorylation site HQ611_RS04585 PF05524 PEP-utilising enzyme, N-terminal HQ611_RS04585 PF02896 PEP-utilising enzyme, TIM barrel domain HQ611_RS04585 PF00391 PEP-utilising enzyme, mobile domain HQ611_RS04590 PF00171 Aldehyde dehydrogenase family HQ611_RS04595 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain HQ611_RS04595 PF01522 Polysaccharide deacetylase HQ611_RS04600 PF00270 DEAD/DEAH box helicase HQ611_RS04600 PF00271 Helicase conserved C-terminal domain HQ611_RS04605 PF00485 Phosphoribulokinase / Uridine kinase family HQ611_RS04610 PF13185 GAF domain HQ611_RS04615 PF12169 DNA polymerase III subunits gamma and tau domain III HQ611_RS04625 PF08279 HTH domain HQ611_RS04625 PF03099 Biotin/lipoate A/B protein ligase family HQ611_RS04625 PF02237 Biotin protein ligase C terminal domain HQ611_RS04630 PF00438 S-adenosylmethionine synthetase, N-terminal domain HQ611_RS04630 PF02773 S-adenosylmethionine synthetase, C-terminal domain HQ611_RS04630 PF02772 S-adenosylmethionine synthetase, central domain HQ611_RS04640 PF08764 Staphylococcus aureus coagulase HQ611_RS04640 PF04022 Staphylocoagulase repeat HQ611_RS04655 PF09819 ABC-type cobalt transport system, permease component HQ611_RS04660 PF00005 ABC transporter HQ611_RS04670 PF03070 TENA/THI-4/PQQC family HQ611_RS04675 PF08543 Phosphomethylpyrimidine kinase HQ611_RS04680 PF02110 Hydroxyethylthiazole kinase family HQ611_RS04685 PF02581 Thiamine monophosphate synthase HQ611_RS04690 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) HQ611_RS04700 PF00571 CBS domain HQ611_RS04700 PF07085 DRTGG domain HQ611_RS04700 PF00392 Bacterial regulatory proteins, gntR family HQ611_RS04700 PF03061 Thioesterase superfamily HQ611_RS04705 PF00557 Metallopeptidase family M24 HQ611_RS04715 PF04138 GtrA-like protein HQ611_RS04720 PF06177 QueT transporter HQ611_RS04725 PF00533 BRCA1 C Terminus (BRCT) domain HQ611_RS04725 PF01653 NAD-dependent DNA ligase adenylation domain HQ611_RS04725 PF03120 NAD-dependent DNA ligase OB-fold domain HQ611_RS04725 PF03119 NAD-dependent DNA ligase C4 zinc finger domain HQ611_RS04725 PF12826 Helix-hairpin-helix motif HQ611_RS04730 PF00781 Diacylglycerol kinase catalytic domain HQ611_RS04735 PF00128 Alpha amylase, catalytic domain HQ611_RS04735 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) HQ611_RS04735 PF17999 Pullulanase N1-terminal domain HQ611_RS04740 PF00128 Alpha amylase, catalytic domain HQ611_RS04740 PF02806 Alpha amylase, C-terminal all-beta domain HQ611_RS04740 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) HQ611_RS04745 PF00132 Bacterial transferase hexapeptide (six repeats) HQ611_RS04745 PF00483 Nucleotidyl transferase HQ611_RS04750 PF00483 Nucleotidyl transferase HQ611_RS04755 PF08323 Starch synthase catalytic domain HQ611_RS04755 PF00534 Glycosyl transferases group 1 HQ611_RS04760 PF00137 ATP synthase subunit C HQ611_RS04765 PF00119 ATP synthase A chain HQ611_RS04770 PF00430 ATP synthase B/B' CF(0) HQ611_RS04775 PF00213 ATP synthase delta (OSCP) subunit HQ611_RS04780 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HQ611_RS04780 PF00306 ATP synthase alpha/beta chain, C terminal domain HQ611_RS04780 PF02874 ATP synthase alpha/beta family, beta-barrel domain HQ611_RS04785 PF00231 ATP synthase HQ611_RS04790 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HQ611_RS04790 PF02874 ATP synthase alpha/beta family, beta-barrel domain HQ611_RS04795 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain HQ611_RS04795 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain HQ611_RS04805 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) HQ611_RS04815 PF01223 DNA/RNA non-specific endonuclease HQ611_RS04820 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain HQ611_RS04820 PF01409 tRNA synthetases class II core domain (F) HQ611_RS04825 PF13673 Acetyltransferase (GNAT) domain HQ611_RS04830 PF03483 B3/4 domain HQ611_RS04830 PF03147 Ferredoxin-fold anticodon binding domain HQ611_RS04830 PF01588 Putative tRNA binding domain HQ611_RS04830 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain HQ611_RS04830 PF03484 tRNA synthetase B5 domain HQ611_RS04835 PF04228 Putative neutral zinc metallopeptidase HQ611_RS04840 PF12705 PD-(D/E)XK nuclease superfamily HQ611_RS04845 PF12705 PD-(D/E)XK nuclease superfamily HQ611_RS04845 PF00580 UvrD/REP helicase N-terminal domain HQ611_RS04845 PF13361 UvrD-like helicase C-terminal domain HQ611_RS04855 PF10396 GTP-binding protein TrmE N-terminus HQ611_RS04855 PF01926 50S ribosome-binding GTPase HQ611_RS04855 PF12631 MnmE helical domain HQ611_RS04860 PF00005 ABC transporter HQ611_RS04860 PF16326 ABC transporter C-terminal domain HQ611_RS04860 PF12848 ABC transporter HQ611_RS04865 PF00676 Dehydrogenase E1 component HQ611_RS04870 PF00364 Biotin-requiring enzyme HQ611_RS04870 PF02779 Transketolase, pyrimidine binding domain HQ611_RS04870 PF02780 Transketolase, C-terminal domain HQ611_RS04875 PF00364 Biotin-requiring enzyme HQ611_RS04875 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) HQ611_RS04875 PF02817 e3 binding domain HQ611_RS04880 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HQ611_RS04880 PF07992 Pyridine nucleotide-disulphide oxidoreductase HQ611_RS04885 PF03099 Biotin/lipoate A/B protein ligase family HQ611_RS04885 PF10437 Bacterial lipoate protein ligase C-terminus HQ611_RS04890 PF07685 CobB/CobQ-like glutamine amidotransferase domain HQ611_RS04895 PF08245 Mur ligase middle domain HQ611_RS04895 PF08353 Domain of unknown function (DUF1727) HQ611_RS04900 PF02457 DisA bacterial checkpoint controller nucleotide-binding HQ611_RS04910 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HQ611_RS04910 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HQ611_RS04910 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HQ611_RS04910 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HQ611_RS04925 PF06969 HemN C-terminal domain HQ611_RS04925 PF04055 Radical SAM superfamily HQ611_RS04935 PF13344 Haloacid dehalogenase-like hydrolase HQ611_RS04945 PF16595 PAM-interacting domain of CRISPR-associated endonuclease Cas9 HQ611_RS04945 PF16592 REC lobe of CRISPR-associated endonuclease Cas9 HQ611_RS04945 PF16593 Bridge helix of CRISPR-associated endonuclease Cas9 HQ611_RS04945 PF13395 HNH endonuclease HQ611_RS04950 PF01867 CRISPR associated protein Cas1 HQ611_RS04955 PF09827 CRISPR associated protein Cas2 HQ611_RS04960 PF09711 CRISPR-associated protein (Cas_Csn2) HQ611_RS04965 PF00334 Nucleoside diphosphate kinase HQ611_RS04970 PF00679 Elongation factor G C-terminus HQ611_RS04970 PF00009 Elongation factor Tu GTP binding domain HQ611_RS04970 PF03144 Elongation factor Tu domain 2 HQ611_RS04970 PF06421 GTP-binding protein LepA C-terminus HQ611_RS04980 PF01966 HD domain HQ611_RS04985 PF13673 Acetyltransferase (GNAT) domain HQ611_RS04990 PF01641 SelR domain HQ611_RS05005 PF00132 Bacterial transferase hexapeptide (six repeats) HQ611_RS05025 PF00005 ABC transporter HQ611_RS05030 PF00392 Bacterial regulatory proteins, gntR family HQ611_RS05035 PF17657 Bacterial DNA polymerase III alpha subunit finger domain HQ611_RS05035 PF02811 PHP domain HQ611_RS05035 PF01336 OB-fold nucleic acid binding domain HQ611_RS05035 PF14579 Helix-hairpin-helix motif HQ611_RS05035 PF07733 Bacterial DNA polymerase III alpha NTPase domain HQ611_RS05040 PF00365 Phosphofructokinase HQ611_RS05045 PF00224 Pyruvate kinase, barrel domain HQ611_RS05045 PF02887 Pyruvate kinase, alpha/beta domain HQ611_RS05050 PF10502 Signal peptidase, peptidase S26 HQ611_RS05055 PF01380 SIS domain HQ611_RS05060 PF03831 PhnA domain HQ611_RS05060 PF08274 PhnA Zinc-Ribbon HQ611_RS05065 PF00528 Binding-protein-dependent transport system inner membrane component HQ611_RS05070 PF00005 ABC transporter HQ611_RS05080 PF01649 Ribosomal protein S20 HQ611_RS05085 PF00485 Phosphoribulokinase / Uridine kinase family HQ611_RS05090 PF05175 Methyltransferase small domain HQ611_RS05095 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region HQ611_RS05100 PF02608 ABC transporter substrate-binding protein PnrA-like HQ611_RS05105 PF00005 ABC transporter HQ611_RS05110 PF02653 Branched-chain amino acid transport system / permease component HQ611_RS05115 PF02653 Branched-chain amino acid transport system / permease component HQ611_RS05120 PF07992 Pyridine nucleotide-disulphide oxidoreductase HQ611_RS05120 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HQ611_RS05125 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain HQ611_RS05125 PF00056 lactate/malate dehydrogenase, NAD binding domain HQ611_RS05130 PF03989 DNA gyrase C-terminal domain, beta-propeller HQ611_RS05130 PF00521 DNA gyrase/topoisomerase IV, subunit A HQ611_RS05135 PF04203 Sortase domain HQ611_RS05140 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HQ611_RS05150 PF00999 Sodium/hydrogen exchanger family HQ611_RS05215 PF02540 NAD synthase HQ611_RS05215 PF00958 GMP synthase C terminal domain HQ611_RS05215 PF00117 Glutamine amidotransferase class-I HQ611_RS05220 PF00392 Bacterial regulatory proteins, gntR family HQ611_RS05220 PF07702 UTRA domain HQ611_RS05225 PF01134 Glucose inhibited division protein A HQ611_RS05235 PF03180 NLPA lipoprotein HQ611_RS05250 PF00005 ABC transporter HQ611_RS05260 PF00072 Response regulator receiver domain HQ611_RS05260 PF00486 Transcriptional regulatory protein, C terminal HQ611_RS05265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQ611_RS05270 PF00589 Phage integrase family HQ611_RS05270 PF13495 Phage integrase, N-terminal SAM-like domain HQ611_RS05275 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HQ611_RS05290 PF02978 Signal peptide binding domain HQ611_RS05290 PF02881 SRP54-type protein, helical bundle domain HQ611_RS05290 PF00448 SRP54-type protein, GTPase domain HQ611_RS05295 PF04297 Putative helix-turn-helix protein, YlxM / p13 like HQ611_RS05300 PF00512 His Kinase A (phospho-acceptor) domain HQ611_RS05300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQ611_RS05305 PF00486 Transcriptional regulatory protein, C terminal HQ611_RS05305 PF00072 Response regulator receiver domain HQ611_RS05310 PF01433 Peptidase family M1 domain HQ611_RS05310 PF11838 ERAP1-like C-terminal domain HQ611_RS05315 PF01895 PhoU domain HQ611_RS05320 PF00005 ABC transporter HQ611_RS05325 PF00005 ABC transporter HQ611_RS05330 PF00528 Binding-protein-dependent transport system inner membrane component HQ611_RS05335 PF00528 Binding-protein-dependent transport system inner membrane component HQ611_RS05340 PF12849 PBP superfamily domain HQ611_RS05345 PF01189 16S rRNA methyltransferase RsmB/F HQ611_RS05345 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF HQ611_RS05345 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF HQ611_RS05350 PF00459 Inositol monophosphatase family HQ611_RS05355 PF05256 Uncharacterised protein family (UPF0223) HQ611_RS05360 PF03960 ArsC family HQ611_RS05365 PF06574 FAD synthetase HQ611_RS05365 PF01687 Riboflavin kinase HQ611_RS05370 PF16198 tRNA pseudouridylate synthase B C-terminal domain HQ611_RS05370 PF01509 TruB family pseudouridylate synthase (N terminal domain) HQ611_RS05400 PF00005 ABC transporter HQ611_RS05405 PF01131 DNA topoisomerase HQ611_RS05405 PF01396 Topoisomerase DNA binding C4 zinc finger HQ611_RS05405 PF01751 Toprim domain HQ611_RS05410 PF02481 DNA recombination-mediator protein A HQ611_RS05410 PF18255 DNA processing protein A sterile alpha motif domain HQ611_RS05415 PF01497 Periplasmic binding protein HQ611_RS05425 PF00005 ABC transporter HQ611_RS05435 PF01032 FecCD transport family HQ611_RS05440 PF14602 Hexapeptide repeat of succinyl-transferase HQ611_RS05440 PF12464 Maltose acetyltransferase HQ611_RS05445 PF01351 Ribonuclease HII HQ611_RS05450 PF01926 50S ribosome-binding GTPase HQ611_RS05455 PF03734 L,D-transpeptidase catalytic domain HQ611_RS05460 PF02554 Carbon starvation protein CstA HQ611_RS05465 PF00072 Response regulator receiver domain HQ611_RS05465 PF04397 LytTr DNA-binding domain HQ611_RS05470 PF13492 GAF domain HQ611_RS05470 PF06580 Histidine kinase HQ611_RS05470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQ611_RS05470 PF07694 5TMR of 5TMR-LYT HQ611_RS05495 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase HQ611_RS05495 PF05257 CHAP domain HQ611_RS05565 PF12538 DNA transporter HQ611_RS05565 PF01580 FtsK/SpoIIIE family HQ611_RS05570 PF10140 WXG100 protein secretion system (Wss), protein YukC HQ611_RS05590 PF06013 Proteins of 100 residues with WXG HQ611_RS05595 PF06013 Proteins of 100 residues with WXG HQ611_RS05610 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain HQ611_RS05610 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HQ611_RS05610 PF02142 MGS-like domain HQ611_RS05615 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain HQ611_RS05615 PF00117 Glutamine amidotransferase class-I HQ611_RS05620 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain HQ611_RS05620 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain HQ611_RS05625 PF01979 Amidohydrolase family HQ611_RS05630 PF00156 Phosphoribosyl transferase domain HQ611_RS05635 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family HQ611_RS05645 PF00005 ABC transporter HQ611_RS05645 PF12848 ABC transporter HQ611_RS05655 PF01118 Semialdehyde dehydrogenase, NAD binding domain HQ611_RS05655 PF02774 Semialdehyde dehydrogenase, dimerisation domain HQ611_RS05665 PF13091 PLD-like domain HQ611_RS05670 PF01268 Formate--tetrahydrofolate ligase HQ611_RS05675 PF10437 Bacterial lipoate protein ligase C-terminus HQ611_RS05675 PF03099 Biotin/lipoate A/B protein ligase family HQ611_RS05685 PF01661 Macro domain HQ611_RS05690 PF01597 Glycine cleavage H-protein HQ611_RS05700 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HQ611_RS05705 PF03099 Biotin/lipoate A/B protein ligase family HQ611_RS05715 PF02441 Flavoprotein HQ611_RS05720 PF12822 ECF transporter, substrate-specific component HQ611_RS05725 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HQ611_RS05725 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HQ611_RS05725 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HQ611_RS05725 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HQ611_RS05735 PF00664 ABC transporter transmembrane region HQ611_RS05735 PF00005 ABC transporter HQ611_RS05740 PF00664 ABC transporter transmembrane region HQ611_RS05740 PF00005 ABC transporter HQ611_RS05755 PF00464 Serine hydroxymethyltransferase HQ611_RS05765 PF05175 Methyltransferase small domain HQ611_RS05770 PF00472 RF-1 domain HQ611_RS05770 PF03462 PCRF domain HQ611_RS05775 PF00265 Thymidine kinase HQ611_RS05780 PF01361 Tautomerase enzyme HQ611_RS05785 PF02424 ApbE family HQ611_RS05790 PF03358 NADPH-dependent FMN reductase HQ611_RS05790 PF04205 FMN-binding domain HQ611_RS05790 PF00890 FAD binding domain HQ611_RS05795 PF00890 FAD binding domain HQ611_RS05795 PF04205 FMN-binding domain HQ611_RS05795 PF03358 NADPH-dependent FMN reductase HQ611_RS05805 PF00860 Permease family HQ611_RS05810 PF00156 Phosphoribosyl transferase domain HQ611_RS05815 PF00478 IMP dehydrogenase / GMP reductase domain HQ611_RS05820 PF07690 Major Facilitator Superfamily HQ611_RS05830 PF02705 K+ potassium transporter HQ611_RS05835 PF00106 short chain dehydrogenase HQ611_RS05840 PF01515 Phosphate acetyl/butaryl transferase HQ611_RS05845 PF00849 RNA pseudouridylate synthase HQ611_RS05850 PF01513 ATP-NAD kinase HQ611_RS05855 PF04607 Region found in RelA / SpoT proteins HQ611_RS05865 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase HQ611_RS05865 PF14572 Phosphoribosyl synthetase-associated domain HQ611_RS05870 PF00266 Aminotransferase class-V HQ611_RS05880 PF02629 CoA binding domain HQ611_RS05880 PF06971 Putative DNA-binding protein N-terminus HQ611_RS05885 PF04002 RadC-like JAB domain HQ611_RS05890 PF01594 AI-2E family transporter HQ611_RS05895 PF00232 Glycosyl hydrolase family 1 HQ611_RS05910 PF12833 Helix-turn-helix domain HQ611_RS05910 PF12852 Cupin HQ611_RS05915 PF00654 Voltage gated chloride channel HQ611_RS05920 PF13416 Bacterial extracellular solute-binding protein HQ611_RS05925 PF00528 Binding-protein-dependent transport system inner membrane component HQ611_RS05930 PF00528 Binding-protein-dependent transport system inner membrane component HQ611_RS05935 PF08402 TOBE domain HQ611_RS05935 PF00005 ABC transporter HQ611_RS05940 PF01565 FAD binding domain HQ611_RS05940 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain HQ611_RS05945 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) HQ611_RS05950 PF02152 Dihydroneopterin aldolase HQ611_RS05955 PF00809 Pterin binding enzyme HQ611_RS05960 PF01227 GTP cyclohydrolase I HQ611_RS05965 PF02875 Mur ligase family, glutamate ligase domain HQ611_RS05965 PF08245 Mur ligase middle domain HQ611_RS05970 PF00892 EamA-like transporter family HQ611_RS05975 PF00288 GHMP kinases N terminal domain HQ611_RS05975 PF08544 GHMP kinases C terminal HQ611_RS05980 PF03447 Homoserine dehydrogenase, NAD binding domain HQ611_RS05980 PF00742 Homoserine dehydrogenase HQ611_RS05985 PF01522 Polysaccharide deacetylase HQ611_RS05990 PF02028 BCCT, betaine/carnitine/choline family transporter HQ611_RS05995 PF00171 Aldehyde dehydrogenase family HQ611_RS06000 PF03601 Conserved hypothetical protein 698 HQ611_RS06025 PF08534 Redoxin HQ611_RS06045 PF03780 Asp23 family, cell envelope-related function HQ611_RS06050 PF05532 CsbD-like HQ611_RS06055 PF03780 Asp23 family, cell envelope-related function HQ611_RS06070 PF04226 Transglycosylase associated protein HQ611_RS06080 PF00580 UvrD/REP helicase N-terminal domain HQ611_RS06080 PF13361 UvrD-like helicase C-terminal domain HQ611_RS06090 PF00860 Permease family HQ611_RS06095 PF01235 Sodium:alanine symporter family HQ611_RS06100 PF16916 Dimerisation domain of Zinc Transporter HQ611_RS06100 PF01545 Cation efflux family HQ611_RS06105 PF03788 LrgA family HQ611_RS06110 PF04172 LrgB-like family HQ611_RS06140 PF02899 Phage integrase, N-terminal SAM-like domain HQ611_RS06140 PF00589 Phage integrase family HQ611_RS06150 PF00575 S1 RNA binding domain HQ611_RS06170 PF01063 Amino-transferase class IV HQ611_RS06175 PF03989 DNA gyrase C-terminal domain, beta-propeller HQ611_RS06175 PF00521 DNA gyrase/topoisomerase IV, subunit A HQ611_RS06180 PF01751 Toprim domain HQ611_RS06180 PF00204 DNA gyrase B HQ611_RS06180 PF00986 DNA gyrase B subunit, carboxyl terminus HQ611_RS06180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQ611_RS06185 PF02660 Glycerol-3-phosphate acyltransferase HQ611_RS06190 PF03167 Uracil DNA glycosylase superfamily HQ611_RS06200 PF02348 Cytidylyltransferase HQ611_RS06200 PF13472 GDSL-like Lipase/Acylhydrolase family HQ611_RS06210 PF02350 UDP-N-acetylglucosamine 2-epimerase HQ611_RS06215 PF08666 SAF domain HQ611_RS06215 PF03102 NeuB family HQ611_RS06220 PF01943 Polysaccharide biosynthesis protein HQ611_RS06230 PF01501 Glycosyl transferase family 8 HQ611_RS06230 PF00535 Glycosyl transferase family 2 HQ611_RS06235 PF00535 Glycosyl transferase family 2 HQ611_RS06240 PF00535 Glycosyl transferase family 2 HQ611_RS06255 PF04101 Glycosyltransferase family 28 C-terminal domain HQ611_RS06255 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase HQ611_RS06260 PF04101 Glycosyltransferase family 28 C-terminal domain HQ611_RS06260 PF03033 Glycosyltransferase family 28 N-terminal domain HQ611_RS06265 PF02397 Bacterial sugar transferase HQ611_RS06270 PF13614 AAA domain HQ611_RS06275 PF02706 Chain length determinant protein HQ611_RS06285 PF03816 Cell envelope-related transcriptional attenuator domain HQ611_RS06290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HQ611_RS06290 PF03466 LysR substrate binding domain HQ611_RS06300 PF01048 Phosphorylase superfamily HQ611_RS06305 PF00654 Voltage gated chloride channel HQ611_RS06310 PF01048 Phosphorylase superfamily HQ611_RS06315 PF03960 ArsC family HQ611_RS06320 PF01676 Metalloenzyme superfamily HQ611_RS06325 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) HQ611_RS06340 PF17770 Ribonuclease J C-terminal domain HQ611_RS06340 PF00753 Metallo-beta-lactamase superfamily HQ611_RS06340 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain HQ611_RS06345 PF00005 ABC transporter HQ611_RS06345 PF08402 TOBE domain HQ611_RS06360 PF05670 NFACT protein RNA binding domain HQ611_RS06365 PF03306 Alpha-acetolactate decarboxylase HQ611_RS06370 PF00205 Thiamine pyrophosphate enzyme, central domain HQ611_RS06370 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HQ611_RS06370 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HQ611_RS06380 PF01594 AI-2E family transporter HQ611_RS06390 PF00293 NUDIX domain HQ611_RS06395 PF08124 Polysaccharide lyase family 8, N terminal alpha-helical domain HQ611_RS06395 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain HQ611_RS06395 PF02278 Polysaccharide lyase family 8, super-sandwich domain HQ611_RS06400 PF16363 GDP-mannose 4,6 dehydratase HQ611_RS06405 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase HQ611_RS06410 PF00483 Nucleotidyl transferase HQ611_RS06415 PF01266 FAD dependent oxidoreductase HQ611_RS06420 PF01784 NIF3 (NGG1p interacting factor 3) HQ611_RS06425 PF04816 tRNA (adenine(22)-N(1))-methyltransferase HQ611_RS06435 PF00156 Phosphoribosyl transferase domain HQ611_RS06440 PF02435 Levansucrase/Invertase HQ611_RS06445 PF10141 Single-strand DNA-specific exonuclease, C terminal domain HQ611_RS06445 PF02272 DHHA1 domain HQ611_RS06445 PF17768 RecJ OB domain HQ611_RS06445 PF01368 DHH family HQ611_RS06450 PF00106 short chain dehydrogenase HQ611_RS06455 PF00753 Metallo-beta-lactamase superfamily HQ611_RS06455 PF12706 Beta-lactamase superfamily domain HQ611_RS06465 PF16360 GTP-binding GTPase Middle Region HQ611_RS06465 PF13167 GTP-binding GTPase N-terminal HQ611_RS06465 PF01926 50S ribosome-binding GTPase HQ611_RS06485 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) HQ611_RS06485 PF11852 Domain of unknown function (DUF3372) HQ611_RS06485 PF03714 Bacterial pullanase-associated domain HQ611_RS06485 PF18494 Pullulanase Ins domain HQ611_RS06485 PF17967 Pullulanase N2 domain HQ611_RS06500 PF03167 Uracil DNA glycosylase superfamily HQ611_RS06505 PF01546 Peptidase family M20/M25/M40 HQ611_RS06510 PF00881 Nitroreductase family HQ611_RS06515 PF03009 Glycerophosphoryl diester phosphodiesterase family HQ611_RS06520 PF08459 UvrC Helix-hairpin-helix N-terminal HQ611_RS06520 PF02151 UvrB/uvrC motif HQ611_RS06520 PF01541 GIY-YIG catalytic domain HQ611_RS06525 PF02677 Epoxyqueuosine reductase QueH HQ611_RS06530 PF01554 MatE HQ611_RS06570 PF01297 Zinc-uptake complex component A periplasmic HQ611_RS06590 PF00929 Exonuclease HQ611_RS06590 PF02811 PHP domain HQ611_RS06590 PF14579 Helix-hairpin-helix motif HQ611_RS06590 PF07733 Bacterial DNA polymerase III alpha NTPase domain HQ611_RS06590 PF11490 DNA polymerase III polC-type N-terminus II HQ611_RS06590 PF17657 Bacterial DNA polymerase III alpha subunit finger domain HQ611_RS06600 PF00589 Phage integrase family HQ611_RS06600 PF13495 Phage integrase, N-terminal SAM-like domain HQ611_RS06610 PF01719 Plasmid replication protein HQ611_RS06650 PF00542 Ribosomal protein L7/L12 C-terminal domain HQ611_RS06650 PF16320 Ribosomal protein L7/L12 dimerisation domain HQ611_RS06655 PF00466 Ribosomal protein L10 HQ611_RS06660 PF00004 ATPase family associated with various cellular activities (AAA) HQ611_RS06660 PF07724 AAA domain (Cdc48 subfamily) HQ611_RS06660 PF17871 AAA lid domain HQ611_RS06660 PF10431 C-terminal, D2-small domain, of ClpB protein HQ611_RS06665 PF02574 Homocysteine S-methyltransferase HQ611_RS06670 PF00324 Amino acid permease HQ611_RS06690 PF01926 50S ribosome-binding GTPase HQ611_RS06695 PF07724 AAA domain (Cdc48 subfamily) HQ611_RS06695 PF10431 C-terminal, D2-small domain, of ClpB protein HQ611_RS06695 PF06689 ClpX C4-type zinc finger HQ611_RS06700 PF00186 Dihydrofolate reductase HQ611_RS06705 PF00303 Thymidylate synthase HQ611_RS06710 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal HQ611_RS06710 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal HQ611_RS06715 PF00368 Hydroxymethylglutaryl-coenzyme A reductase HQ611_RS06725 PF03006 Haemolysin-III related HQ611_RS06730 PF00781 Diacylglycerol kinase catalytic domain HQ611_RS06745 PF01070 FMN-dependent dehydrogenase HQ611_RS06750 PF08544 GHMP kinases C terminal HQ611_RS06750 PF00288 GHMP kinases N terminal domain HQ611_RS06760 PF10509 Galactokinase galactose-binding signature HQ611_RS06760 PF08544 GHMP kinases C terminal HQ611_RS06760 PF00288 GHMP kinases N terminal domain HQ611_RS06765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQ611_RS06765 PF00512 His Kinase A (phospho-acceptor) domain HQ611_RS06770 PF00072 Response regulator receiver domain HQ611_RS06770 PF00486 Transcriptional regulatory protein, C terminal HQ611_RS06775 PF04607 Region found in RelA / SpoT proteins HQ611_RS06780 PF00005 ABC transporter HQ611_RS06780 PF00664 ABC transporter transmembrane region HQ611_RS06785 PF00664 ABC transporter transmembrane region HQ611_RS06785 PF00005 ABC transporter HQ611_RS06795 PF02872 5'-nucleotidase, C-terminal domain HQ611_RS06795 PF17936 Bacterial Ig domain HQ611_RS06795 PF00149 Calcineurin-like phosphoesterase HQ611_RS06800 PF01327 Polypeptide deformylase HQ611_RS06805 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase HQ611_RS06805 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain HQ611_RS06815 PF00664 ABC transporter transmembrane region HQ611_RS06815 PF00005 ABC transporter HQ611_RS06820 PF00005 ABC transporter HQ611_RS06820 PF00664 ABC transporter transmembrane region HQ611_RS06830 PF00005 ABC transporter HQ611_RS06830 PF12848 ABC transporter HQ611_RS06830 PF16326 ABC transporter C-terminal domain HQ611_RS06835 PF13735 tRNA nucleotidyltransferase domain 2 putative HQ611_RS06835 PF12627 Probable RNA and SrmB- binding site of polymerase A HQ611_RS06835 PF01743 Poly A polymerase head domain HQ611_RS06840 PF02645 Uncharacterised protein, DegV family COG1307 HQ611_RS06860 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HQ611_RS06860 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HQ611_RS06865 PF00294 pfkB family carbohydrate kinase HQ611_RS06870 PF00455 DeoR C terminal sensor domain HQ611_RS06870 PF08220 DeoR-like helix-turn-helix domain HQ611_RS06875 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase HQ611_RS06875 PF01476 LysM domain HQ611_RS06885 PF02558 Ketopantoate reductase PanE/ApbA HQ611_RS06885 PF08546 Ketopantoate reductase PanE/ApbA C terminal HQ611_RS06895 PF07992 Pyridine nucleotide-disulphide oxidoreductase HQ611_RS06900 PF01746 tRNA (Guanine-1)-methyltransferase HQ611_RS06905 PF01782 RimM N-terminal domain HQ611_RS06905 PF05239 PRC-barrel domain HQ611_RS06930 PF00886 Ribosomal protein S16 HQ611_RS06935 PF02687 FtsX-like permease family HQ611_RS06935 PF12704 MacB-like periplasmic core domain HQ611_RS06940 PF00005 ABC transporter HQ611_RS06945 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HQ611_RS06950 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HQ611_RS06950 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain HQ611_RS06950 PF02142 MGS-like domain HQ611_RS06955 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain HQ611_RS06955 PF00117 Glutamine amidotransferase class-I HQ611_RS06960 PF00156 Phosphoribosyl transferase domain HQ611_RS06965 PF01479 S4 domain HQ611_RS06965 PF00849 RNA pseudouridylate synthase HQ611_RS06970 PF01252 Signal peptidase (SPase) II HQ611_RS06975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HQ611_RS06975 PF03466 LysR substrate binding domain HQ611_RS06980 PF01016 Ribosomal L27 protein HQ611_RS06990 PF00829 Ribosomal prokaryotic L21 protein HQ611_RS07000 PF02568 Thiamine biosynthesis protein (ThiI) HQ611_RS07000 PF02926 THUMP domain HQ611_RS07005 PF00266 Aminotransferase class-V HQ611_RS07015 PF07992 Pyridine nucleotide-disulphide oxidoreductase HQ611_RS07015 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HQ611_RS07020 PF06133 Control of competence regulator ComK, YlbF/YmcA HQ611_RS07025 PF01264 Chorismate synthase HQ611_RS07030 PF01761 3-dehydroquinate synthase HQ611_RS07035 PF01487 Type I 3-dehydroquinase HQ611_RS07040 PF17785 PUA-like domain HQ611_RS07040 PF10672 S-adenosylmethionine-dependent methyltransferase HQ611_RS07045 PF00884 Sulfatase HQ611_RS07050 PF00453 Ribosomal protein L20 HQ611_RS07055 PF01632 Ribosomal protein L35 HQ611_RS07060 PF00707 Translation initiation factor IF-3, C-terminal domain HQ611_RS07060 PF05198 Translation initiation factor IF-3, N-terminal domain HQ611_RS07065 PF02224 Cytidylate kinase HQ611_RS07085 PF07687 Peptidase dimerisation domain HQ611_RS07085 PF01546 Peptidase family M20/M25/M40 HQ611_RS07090 PF01943 Polysaccharide biosynthesis protein HQ611_RS07090 PF14667 Polysaccharide biosynthesis C-terminal domain HQ611_RS07095 PF02875 Mur ligase family, glutamate ligase domain HQ611_RS07095 PF08245 Mur ligase middle domain HQ611_RS07100 PF00005 ABC transporter HQ611_RS07105 PF01497 Periplasmic binding protein HQ611_RS07110 PF01032 FecCD transport family HQ611_RS07115 PF01032 FecCD transport family HQ611_RS07125 PF01368 DHH family HQ611_RS07125 PF02833 DHHA2 domain HQ611_RS07130 PF04055 Radical SAM superfamily HQ611_RS07135 PF00571 CBS domain HQ611_RS07135 PF03471 Transporter associated domain HQ611_RS07135 PF01595 Cyclin M transmembrane N-terminal domain HQ611_RS07140 PF06962 Putative rRNA methylase HQ611_RS07145 PF04055 Radical SAM superfamily HQ611_RS07145 PF16199 Radical_SAM C-terminal domain HQ611_RS07150 PF01569 PAP2 superfamily HQ611_RS07155 PF12822 ECF transporter, substrate-specific component HQ611_RS07190 PF08323 Starch synthase catalytic domain HQ611_RS07190 PF00534 Glycosyl transferases group 1 HQ611_RS07195 PF00535 Glycosyl transferase family 2 HQ611_RS07200 PF14667 Polysaccharide biosynthesis C-terminal domain HQ611_RS07200 PF01943 Polysaccharide biosynthesis protein HQ611_RS07210 PF00535 Glycosyl transferase family 2 HQ611_RS07215 PF00535 Glycosyl transferase family 2 HQ611_RS07225 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase HQ611_RS07230 PF04991 LicD family HQ611_RS07245 PF00535 Glycosyl transferase family 2 HQ611_RS07250 PF00535 Glycosyl transferase family 2 HQ611_RS07260 PF04321 RmlD substrate binding domain HQ611_RS07265 PF01883 Iron-sulfur cluster assembly protein HQ611_RS07270 PF03979 Sigma-70 factor, region 1.1 HQ611_RS07270 PF04545 Sigma-70, region 4 HQ611_RS07270 PF04539 Sigma-70 region 3 HQ611_RS07270 PF04542 Sigma-70 region 2 HQ611_RS07270 PF00140 Sigma-70 factor, region 1.2 HQ611_RS07275 PF01807 CHC2 zinc finger HQ611_RS07275 PF08275 DNA primase catalytic core, N-terminal domain HQ611_RS07275 PF10410 DnaB-helicase binding domain of primase HQ611_RS07280 PF01741 Large-conductance mechanosensitive channel, MscL HQ611_RS07285 PF01165 Ribosomal protein S21 HQ611_RS07295 PF00497 Bacterial extracellular solute-binding proteins, family 3 HQ611_RS07300 PF00909 Ammonium Transporter Family HQ611_RS07310 PF17773 UPF0176 acylphosphatase like domain HQ611_RS07310 PF12368 Rhodanase C-terminal HQ611_RS07310 PF00581 Rhodanese-like domain HQ611_RS07320 PF07690 Major Facilitator Superfamily HQ611_RS07325 PF00343 Carbohydrate phosphorylase HQ611_RS07330 PF02446 4-alpha-glucanotransferase HQ611_RS07335 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family HQ611_RS07335 PF00356 Bacterial regulatory proteins, lacI family HQ611_RS07345 PF00528 Binding-protein-dependent transport system inner membrane component HQ611_RS07350 PF00528 Binding-protein-dependent transport system inner membrane component HQ611_RS07355 PF00854 POT family HQ611_RS07360 PF00293 NUDIX domain HQ611_RS07360 PF13344 Haloacid dehalogenase-like hydrolase HQ611_RS07375 PF00534 Glycosyl transferases group 1 HQ611_RS07380 PF07517 SecA DEAD-like domain HQ611_RS07380 PF01043 SecA preprotein cross-linking domain HQ611_RS07380 PF07516 SecA Wing and Scaffold domain HQ611_RS07390 PF16929 Accessory Sec system GspB-transporter HQ611_RS07395 PF16993 Accessory Sec system protein Asp1 HQ611_RS07400 PF00344 SecY translocase HQ611_RS07405 PF01501 Glycosyl transferase family 8 HQ611_RS07405 PF08759 Glycosyltransferase GT-D fold HQ611_RS07410 PF00535 Glycosyl transferase family 2 HQ611_RS07410 PF01501 Glycosyl transferase family 8 HQ611_RS07415 PF01501 Glycosyl transferase family 8 HQ611_RS07415 PF08759 Glycosyltransferase GT-D fold HQ611_RS07420 PF00535 Glycosyl transferase family 2 HQ611_RS07420 PF01501 Glycosyl transferase family 8 HQ611_RS07425 PF01501 Glycosyl transferase family 8 HQ611_RS07425 PF08759 Glycosyltransferase GT-D fold HQ611_RS07435 PF04286 Protein of unknown function (DUF445) HQ611_RS07435 PF00746 LPXTG cell wall anchor motif HQ611_RS07455 PF00271 Helicase conserved C-terminal domain HQ611_RS07455 PF17757 UvrB interaction domain HQ611_RS07455 PF04851 Type III restriction enzyme, res subunit HQ611_RS07455 PF02151 UvrB/uvrC motif HQ611_RS07455 PF12344 Ultra-violet resistance protein B HQ611_RS07465 PF00528 Binding-protein-dependent transport system inner membrane component HQ611_RS07470 PF00005 ABC transporter HQ611_RS07485 PF09269 Domain of unknown function (DUF1967) HQ611_RS07485 PF01018 GTP1/OBG HQ611_RS07485 PF01926 50S ribosome-binding GTPase HQ611_RS07495 PF02073 Thermophilic metalloprotease (M29) HQ611_RS07505 PF01425 Amidase HQ611_RS07510 PF01479 S4 domain HQ611_RS07510 PF00849 RNA pseudouridylate synthase HQ611_RS07515 PF00248 Aldo/keto reductase family HQ611_RS07520 PF00881 Nitroreductase family HQ611_RS07525 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HQ611_RS07530 PF00535 Glycosyl transferase family 2 HQ611_RS07535 PF00324 Amino acid permease HQ611_RS07540 PF01668 SmpB protein HQ611_RS07545 PF17876 Cold shock domain HQ611_RS07545 PF08206 Ribonuclease B OB domain HQ611_RS07545 PF00773 RNB domain HQ611_RS07545 PF00575 S1 RNA binding domain HQ611_RS07555 PF00471 Ribosomal protein L33 HQ611_RS07560 PF07690 Major Facilitator Superfamily HQ611_RS07560 PF00083 Sugar (and other) transporter HQ611_RS07570 PF00005 ABC transporter HQ611_RS07570 PF13732 Domain of unknown function (DUF4162) HQ611_RS07575 PF01121 Dephospho-CoA kinase HQ611_RS07580 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain HQ611_RS07580 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain HQ611_RS07580 PF06827 Zinc finger found in FPG and IleRS HQ611_RS07585 PF01381 Helix-turn-helix HQ611_RS07630 PF07650 KH domain HQ611_RS07630 PF01926 50S ribosome-binding GTPase HQ611_RS07635 PF01219 Prokaryotic diacylglycerol kinase HQ611_RS07640 PF02130 Uncharacterized protein family UPF0054 HQ611_RS07650 PF13344 Haloacid dehalogenase-like hydrolase HQ611_RS07650 PF00293 NUDIX domain HQ611_RS07660 PF02562 PhoH-like protein HQ611_RS07665 PF06100 MCRA family HQ611_RS07670 PF06855 YozE SAM-like fold HQ611_RS07675 PF01625 Peptide methionine sulfoxide reductase HQ611_RS07685 PF01765 Ribosome recycling factor HQ611_RS07690 PF00696 Amino acid kinase family HQ611_RS07695 PF00005 ABC transporter HQ611_RS07700 PF00005 ABC transporter HQ611_RS07700 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HQ611_RS07705 PF00528 Binding-protein-dependent transport system inner membrane component HQ611_RS07705 PF12911 N-terminal TM domain of oligopeptide transport permease C HQ611_RS07710 PF00528 Binding-protein-dependent transport system inner membrane component HQ611_RS07715 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HQ611_RS07720 PF00687 Ribosomal protein L1p/L10e family HQ611_RS07725 PF00298 Ribosomal protein L11, RNA binding domain HQ611_RS07725 PF03946 Ribosomal protein L11, N-terminal domain HQ611_RS07730 PF07690 Major Facilitator Superfamily HQ611_RS07735 PF07687 Peptidase dimerisation domain HQ611_RS07735 PF01546 Peptidase family M20/M25/M40 HQ611_RS07740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HQ611_RS07740 PF03466 LysR substrate binding domain HQ611_RS07750 PF04715 Anthranilate synthase component I, N terminal region HQ611_RS07750 PF00425 chorismate binding enzyme HQ611_RS07755 PF01580 FtsK/SpoIIIE family HQ611_RS07755 PF17854 FtsK alpha domain HQ611_RS07755 PF09397 Ftsk gamma domain HQ611_RS07760 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD HQ611_RS07765 PF00950 ABC 3 transport family HQ611_RS07770 PF00005 ABC transporter HQ611_RS07775 PF01297 Zinc-uptake complex component A periplasmic HQ611_RS07785 PF01048 Phosphorylase superfamily HQ611_RS07795 PF00293 NUDIX domain HQ611_RS07800 PF00132 Bacterial transferase hexapeptide (six repeats) HQ611_RS07800 PF12804 MobA-like NTP transferase domain HQ611_RS07800 PF14602 Hexapeptide repeat of succinyl-transferase HQ611_RS07815 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HQ611_RS07815 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HQ611_RS07850 PF00535 Glycosyl transferase family 2 HQ611_RS07875 PF05525 Branched-chain amino acid transport protein HQ611_RS07880 PF09334 tRNA synthetases class I (M) HQ611_RS07880 PF01588 Putative tRNA binding domain HQ611_RS07885 PF03848 Tellurite resistance protein TehB HQ611_RS07885 PF09313 Domain of unknown function (DUF1971) HQ611_RS07895 PF02378 Phosphotransferase system, EIIC HQ611_RS07905 PF03372 Endonuclease/Exonuclease/phosphatase family HQ611_RS07910 PF03960 ArsC family HQ611_RS07915 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain HQ611_RS07915 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain HQ611_RS07920 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HQ611_RS07920 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HQ611_RS07930 PF00266 Aminotransferase class-V HQ611_RS07935 PF03932 CutC family HQ611_RS07940 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HQ611_RS07945 PF06156 Initiation control protein YabA HQ611_RS07950 PF09115 DNA polymerase III, delta subunit, C terminal HQ611_RS07955 PF02223 Thymidylate kinase HQ611_RS07960 PF00571 CBS domain HQ611_RS07965 PF00005 ABC transporter HQ611_RS07970 PF12399 Branched-chain amino acid ATP-binding cassette transporter HQ611_RS07970 PF00005 ABC transporter HQ611_RS07975 PF11862 Domain of unknown function (DUF3382) HQ611_RS07975 PF02653 Branched-chain amino acid transport system / permease component HQ611_RS07980 PF02653 Branched-chain amino acid transport system / permease component HQ611_RS07985 PF13458 Periplasmic binding protein HQ611_RS07990 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) HQ611_RS07995 PF00574 Clp protease HQ611_RS08005 PF00155 Aminotransferase class I and II HQ611_RS08010 PF00588 SpoU rRNA Methylase family HQ611_RS08015 PF13520 Amino acid permease HQ611_RS08020 PF02080 TrkA-C domain HQ611_RS08020 PF02254 TrkA-N domain HQ611_RS08025 PF02386 Cation transport protein HQ611_RS08030 PF01809 Putative membrane protein insertion efficiency factor HQ611_RS08035 PF00849 RNA pseudouridylate synthase HQ611_RS08035 PF01479 S4 domain HQ611_RS08040 PF04079 Segregation and condensation complex subunit ScpB HQ611_RS08045 PF02616 Segregation and condensation protein ScpA HQ611_RS08050 PF00589 Phage integrase family HQ611_RS08065 PF01725 Ham1 family HQ611_RS08070 PF01177 Asp/Glu/Hydantoin racemase HQ611_RS08075 PF03672 Uncharacterised protein family (UPF0154) HQ611_RS08085 PF02829 3H domain HQ611_RS08085 PF08279 HTH domain HQ611_RS08090 PF01027 Inhibitor of apoptosis-promoting Bax1 HQ611_RS08100 PF00588 SpoU rRNA Methylase family HQ611_RS08100 PF08032 RNA 2'-O ribose methyltransferase substrate binding HQ611_RS08105 PF00708 Acylphosphatase HQ611_RS08110 PF02096 60Kd inner membrane protein HQ611_RS08115 PF00528 Binding-protein-dependent transport system inner membrane component HQ611_RS08120 PF00497 Bacterial extracellular solute-binding proteins, family 3 HQ611_RS08125 PF01425 Amidase HQ611_RS08130 PF01272 Transcription elongation factor, GreA/GreB, C-term HQ611_RS08130 PF03449 Transcription elongation factor, N-terminal HQ611_RS08135 PF02618 YceG-like family HQ611_RS08145 PF08245 Mur ligase middle domain HQ611_RS08145 PF02875 Mur ligase family, glutamate ligase domain HQ611_RS08145 PF01225 Mur ligase family, catalytic domain HQ611_RS08155 PF00271 Helicase conserved C-terminal domain HQ611_RS08155 PF00176 SNF2 family N-terminal domain HQ611_RS08155 PF04434 SWIM zinc finger HQ611_RS08160 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal HQ611_RS08160 PF01926 50S ribosome-binding GTPase HQ611_RS08165 PF07319 Primosomal protein DnaI N-terminus HQ611_RS08165 PF01695 IstB-like ATP binding protein HQ611_RS08175 PF03477 ATP cone domain HQ611_RS08180 PF18719 ArlS sensor domain HQ611_RS08180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQ611_RS08180 PF00512 His Kinase A (phospho-acceptor) domain HQ611_RS08185 PF00072 Response regulator receiver domain HQ611_RS08185 PF00486 Transcriptional regulatory protein, C terminal HQ611_RS08195 PF01435 Peptidase family M48 HQ611_RS08200 PF04011 LemA family HQ611_RS08205 PF02527 rRNA small subunit methyltransferase G HQ611_RS08210 PF02386 Cation transport protein HQ611_RS08215 PF02080 TrkA-C domain HQ611_RS08215 PF02254 TrkA-N domain HQ611_RS08225 PF00005 ABC transporter HQ611_RS08225 PF12558 ATP-binding cassette cobalt transporter HQ611_RS08230 PF07155 ECF-type riboflavin transporter, S component HQ611_RS08235 PF00375 Sodium:dicarboxylate symporter family HQ611_RS08240 PF05525 Branched-chain amino acid transport protein HQ611_RS08245 PF00107 Zinc-binding dehydrogenase HQ611_RS08245 PF08240 Alcohol dehydrogenase GroES-like domain HQ611_RS08245 PF13823 Alcohol dehydrogenase GroES-associated HQ611_RS08250 PF00528 Binding-protein-dependent transport system inner membrane component HQ611_RS08255 PF00005 ABC transporter HQ611_RS08255 PF09383 NIL domain HQ611_RS08265 PF03180 NLPA lipoprotein HQ611_RS08270 PF00497 Bacterial extracellular solute-binding proteins, family 3 HQ611_RS08275 PF07722 Peptidase C26 HQ611_RS08280 PF01709 Transcriptional regulator HQ611_RS08285 PF02733 Dak1 domain HQ611_RS08290 PF14278 Transcriptional regulator C-terminal region HQ611_RS08290 PF00440 Bacterial regulatory proteins, tetR family HQ611_RS08295 PF02733 Dak1 domain HQ611_RS08300 PF02734 DAK2 domain HQ611_RS08305 PF03610 PTS system fructose IIA component HQ611_RS08310 PF00230 Major intrinsic protein HQ611_RS08320 PF13411 MerR HTH family regulatory protein HQ611_RS08320 PF07739 TipAS antibiotic-recognition domain HQ611_RS08325 PF05636 HIGH Nucleotidyl Transferase HQ611_RS08335 PF13649 Methyltransferase domain HQ611_RS08350 PF01966 HD domain HQ611_RS08355 PF01467 Cytidylyltransferase-like HQ611_RS08360 PF01985 CRS1 / YhbY (CRM) domain HQ611_RS08365 PF01926 50S ribosome-binding GTPase HQ611_RS08380 PF02637 GatB domain HQ611_RS08380 PF02934 GatB/GatE catalytic domain HQ611_RS08385 PF01425 Amidase HQ611_RS08390 PF02686 Glu-tRNAGln amidotransferase C subunit HQ611_RS08395 PF00391 PEP-utilising enzyme, mobile domain HQ611_RS08395 PF02896 PEP-utilising enzyme, TIM barrel domain HQ611_RS08395 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain HQ611_RS08400 PF03618 Kinase/pyrophosphorylase HQ611_RS08405 PF00571 CBS domain HQ611_RS08405 PF08279 HTH domain HQ611_RS08415 PF00378 Enoyl-CoA hydratase/isomerase HQ611_RS08415 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain HQ611_RS08415 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain HQ611_RS08420 PF00857 Isochorismatase family HQ611_RS08425 PF08222 CodY helix-turn-helix domain HQ611_RS08425 PF06018 CodY GAF-like domain HQ611_RS08430 PF00155 Aminotransferase class I and II HQ611_RS08435 PF00582 Universal stress protein family HQ611_RS08445 PF00710 Asparaginase, N-terminal HQ611_RS08445 PF17763 Glutaminase/Asparaginase C-terminal domain HQ611_RS08450 PF18317 Shikimate 5'-dehydrogenase C-terminal domain HQ611_RS08450 PF08501 Shikimate dehydrogenase substrate binding domain HQ611_RS08455 PF00248 Aldo/keto reductase family HQ611_RS08460 PF17191 RecG wedge domain HQ611_RS08460 PF00271 Helicase conserved C-terminal domain HQ611_RS08460 PF00270 DEAD/DEAH box helicase HQ611_RS08465 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase HQ611_RS08465 PF05257 CHAP domain HQ611_RS08470 PF00842 Alanine racemase, C-terminal domain HQ611_RS08470 PF01168 Alanine racemase, N-terminal domain HQ611_RS08475 PF01648 4'-phosphopantetheinyl transferase superfamily HQ611_RS08480 PF00793 DAHP synthetase I family HQ611_RS08485 PF07517 SecA DEAD-like domain HQ611_RS08485 PF02810 SEC-C motif HQ611_RS08485 PF01043 SecA preprotein cross-linking domain HQ611_RS08485 PF07516 SecA Wing and Scaffold domain HQ611_RS08490 PF01238 Phosphomannose isomerase type I HQ611_RS08495 PF00480 ROK family HQ611_RS08500 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 HQ611_RS08500 PF00367 phosphotransferase system, EIIB HQ611_RS08500 PF02378 Phosphotransferase system, EIIC HQ611_RS08505 PF08244 Glycosyl hydrolases family 32 C terminal HQ611_RS08505 PF00251 Glycosyl hydrolases family 32 N-terminal domain HQ611_RS08510 PF00356 Bacterial regulatory proteins, lacI family HQ611_RS08515 PF01029 NusB family HQ611_RS08520 PF03780 Asp23 family, cell envelope-related function HQ611_RS08525 PF01132 Elongation factor P (EF-P) OB domain HQ611_RS08525 PF09285 Elongation factor P, C-terminal HQ611_RS08525 PF08207 Elongation factor P (EF-P) KOW-like domain HQ611_RS08550 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region HQ611_RS08555 PF01321 Creatinase/Prolidase N-terminal domain HQ611_RS08555 PF00557 Metallopeptidase family M24 HQ611_RS08565 PF07690 Major Facilitator Superfamily HQ611_RS08570 PF00005 ABC transporter HQ611_RS08570 PF17755 UvrA DNA-binding domain HQ611_RS08570 PF17760 UvrA interaction domain HQ611_RS08585 PF01084 Ribosomal protein S18 HQ611_RS08590 PF00436 Single-strand binding protein family HQ611_RS08595 PF01250 Ribosomal protein S6 HQ611_RS08600 PF14815 NUDIX domain HQ611_RS08600 PF00730 HhH-GPD superfamily base excision DNA repair protein HQ611_RS08605 PF01381 Helix-turn-helix HQ611_RS08610 PF00085 Thioredoxin HQ611_RS08620 PF00488 MutS domain V HQ611_RS08620 PF01713 Smr domain HQ611_RS08635 PF11858 Domain of unknown function (DUF3378) HQ611_RS08635 PF01351 Ribonuclease HII HQ611_RS08640 PF10502 Signal peptidase, peptidase S26 HQ611_RS08645 PF14490 Helix-hairpin-helix containing domain HQ611_RS08645 PF13538 UvrD-like helicase C-terminal domain HQ611_RS08645 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain HQ611_RS08655 PF11798 IMS family HHH motif HQ611_RS08655 PF11799 impB/mucB/samB family C-terminal domain HQ611_RS08655 PF00817 impB/mucB/samB family HQ611_RS08660 PF01228 Glycine radical HQ611_RS08660 PF02901 Pyruvate formate lyase-like HQ611_RS08670 PF00144 Beta-lactamase HQ611_RS08685 PF00230 Major intrinsic protein HQ611_RS08695 PF07690 Major Facilitator Superfamily HQ611_RS08700 PF13545 Crp-like helix-turn-helix domain HQ611_RS08705 PF09168 X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal HQ611_RS08705 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain HQ611_RS08705 PF02129 X-Pro dipeptidyl-peptidase (S15 family) HQ611_RS08715 PF00348 Polyprenyl synthetase HQ611_RS08720 PF00005 ABC transporter HQ611_RS08720 PF00664 ABC transporter transmembrane region HQ611_RS08725 PF00664 ABC transporter transmembrane region HQ611_RS08725 PF00005 ABC transporter HQ611_RS08730 PF02322 Cytochrome bd terminal oxidase subunit II HQ611_RS08735 PF01654 Cytochrome bd terminal oxidase subunit I HQ611_RS08740 PF07992 Pyridine nucleotide-disulphide oxidoreductase HQ611_RS08760 PF12161 HsdM N-terminal domain HQ611_RS08760 PF02384 N-6 DNA Methylase HQ611_RS08770 PF00456 Transketolase, thiamine diphosphate binding domain HQ611_RS08770 PF02780 Transketolase, C-terminal domain HQ611_RS08770 PF02779 Transketolase, pyrimidine binding domain HQ611_RS08775 PF00923 Transaldolase/Fructose-6-phosphate aldolase HQ611_RS08780 PF00834 Ribulose-phosphate 3 epimerase family HQ611_RS08785 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HQ611_RS08790 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HQ611_RS08795 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HQ611_RS08800 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HQ611_RS08800 PF00874 PRD domain HQ611_RS08800 PF08279 HTH domain HQ611_RS08800 PF05043 Mga helix-turn-helix domain HQ611_RS08815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HQ611_RS08815 PF03466 LysR substrate binding domain HQ611_RS08820 PF00106 short chain dehydrogenase HQ611_RS08830 PF00248 Aldo/keto reductase family HQ611_RS08835 PF04229 GrpB protein HQ611_RS08840 PF02567 Phenazine biosynthesis-like protein HQ611_RS08850 PF02575 YbaB/EbfC DNA-binding family HQ611_RS08860 PF07739 TipAS antibiotic-recognition domain HQ611_RS08860 PF13411 MerR HTH family regulatory protein HQ611_RS08870 PF08279 HTH domain HQ611_RS08870 PF04394 Protein of unknown function, DUF536 HQ611_RS08885 PF00253 Ribosomal protein S14p/S29e HQ611_RS08895 PF00814 Glycoprotease family HQ611_RS08900 PF00583 Acetyltransferase (GNAT) family HQ611_RS08905 PF00814 Glycoprotease family HQ611_RS08910 PF07288 Protein of unknown function (DUF1447) HQ611_RS08915 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain HQ611_RS08915 PF00753 Metallo-beta-lactamase superfamily HQ611_RS08915 PF17770 Ribonuclease J C-terminal domain HQ611_RS08920 PF05257 CHAP domain HQ611_RS08920 PF01476 LysM domain HQ611_RS08925 PF03951 Glutamine synthetase, beta-Grasp domain HQ611_RS08925 PF00120 Glutamine synthetase, catalytic domain HQ611_RS08930 PF13411 MerR HTH family regulatory protein HQ611_RS08940 PF00162 Phosphoglycerate kinase HQ611_RS08945 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) HQ611_RS08950 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain HQ611_RS08950 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain HQ611_RS08955 PF00009 Elongation factor Tu GTP binding domain HQ611_RS08955 PF03764 Elongation factor G, domain IV HQ611_RS08955 PF14492 Elongation Factor G, domain II HQ611_RS08955 PF00679 Elongation factor G C-terminus HQ611_RS08955 PF03144 Elongation factor Tu domain 2 HQ611_RS08960 PF00177 Ribosomal protein S7p/S5e HQ611_RS08965 PF00164 Ribosomal protein S12/S23 HQ611_RS08970 PF09182 Bacterial purine repressor, N-terminal HQ611_RS08970 PF00156 Phosphoribosyl transferase domain HQ611_RS08975 PF01336 OB-fold nucleic acid binding domain HQ611_RS08975 PF01966 HD domain HQ611_RS08980 PF02646 RmuC family HQ611_RS08990 PF00834 Ribulose-phosphate 3 epimerase family HQ611_RS08995 PF03193 RsgA GTPase HQ611_RS08995 PF16745 RsgA N-terminal domain HQ611_RS09000 PF08241 Methyltransferase domain HQ611_RS09005 PF00398 Ribosomal RNA adenine dimethylase HQ611_RS09015 PF13331 Domain of unknown function (DUF4093) HQ611_RS09020 PF01026 TatD related DNase HQ611_RS09045 PF04914 DltD protein HQ611_RS09050 PF00550 Phosphopantetheine attachment site HQ611_RS09055 PF03062 MBOAT, membrane-bound O-acyltransferase family HQ611_RS09060 PF00501 AMP-binding enzyme HQ611_RS09060 PF13193 AMP-binding enzyme C-terminal domain HQ611_RS09070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQ611_RS09070 PF00512 His Kinase A (phospho-acceptor) domain HQ611_RS09075 PF00486 Transcriptional regulatory protein, C terminal HQ611_RS09075 PF00072 Response regulator receiver domain HQ611_RS09080 PF00468 Ribosomal protein L34 HQ611_RS09085 PF07670 Nucleoside recognition HQ611_RS09090 PF00528 Binding-protein-dependent transport system inner membrane component HQ611_RS09095 PF00005 ABC transporter HQ611_RS09095 PF00571 CBS domain HQ611_RS09100 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase HQ611_RS09100 PF09363 XFP C-terminal domain HQ611_RS09100 PF09364 XFP N-terminal domain HQ611_RS09120 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HQ611_RS09120 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HQ611_RS09130 PF03611 PTS system sugar-specific permease component HQ611_RS09135 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HQ611_RS09135 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HQ611_RS09145 PF00356 Bacterial regulatory proteins, lacI family HQ611_RS09150 PF00923 Transaldolase/Fructose-6-phosphate aldolase HQ611_RS09155 PF00596 Class II Aldolase and Adducin N-terminal domain HQ611_RS09160 PF01261 Xylose isomerase-like TIM barrel HQ611_RS09165 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family HQ611_RS09170 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HQ611_RS09175 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HQ611_RS09180 PF03611 PTS system sugar-specific permease component HQ611_RS09195 PF00709 Adenylosuccinate synthetase HQ611_RS09215 PF18419 ATP-grasp-like domain HQ611_RS09215 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain HQ611_RS09215 PF04262 Glutamate-cysteine ligase HQ611_RS09230 PF01430 Hsp33 protein HQ611_RS09235 PF01207 Dihydrouridine synthase (Dus) HQ611_RS09240 PF01712 Deoxynucleoside kinase HQ611_RS09250 PF00004 ATPase family associated with various cellular activities (AAA) HQ611_RS09250 PF07724 AAA domain (Cdc48 subfamily) HQ611_RS09250 PF17871 AAA lid domain HQ611_RS09250 PF02861 Clp amino terminal domain, pathogenicity island component HQ611_RS09250 PF10431 C-terminal, D2-small domain, of ClpB protein HQ611_RS09255 PF05848 CtsR N-terminal HTH domain HQ611_RS09255 PF17727 CtsR C-terminal dimerization domain HQ611_RS09265 PF00889 Elongation factor TS HQ611_RS09270 PF00318 Ribosomal protein S2 HQ611_RS09275 PF00578 AhpC/TSA family HQ611_RS09280 PF13192 Thioredoxin domain HQ611_RS09280 PF07992 Pyridine nucleotide-disulphide oxidoreductase HQ611_RS09290 PF00999 Sodium/hydrogen exchanger family HQ611_RS09300 PF17676 LD-carboxypeptidase C-terminal domain HQ611_RS09300 PF02016 LD-carboxypeptidase N-terminal domain HQ611_RS09305 PF05649 Peptidase family M13 HQ611_RS09305 PF01431 Peptidase family M13 HQ611_RS09325 PF01327 Polypeptide deformylase HQ611_RS09330 PF00356 Bacterial regulatory proteins, lacI family HQ611_RS09340 PF03613 PTS system mannose/fructose/sorbose family IID component HQ611_RS09345 PF03609 PTS system sorbose-specific iic component HQ611_RS09350 PF03830 PTS system sorbose subfamily IIB component HQ611_RS09355 PF07470 Glycosyl Hydrolase Family 88 HQ611_RS09360 PF03830 PTS system sorbose subfamily IIB component HQ611_RS09360 PF03610 PTS system fructose IIA component HQ611_RS09395 PF00929 Exonuclease HQ611_RS09395 PF02811 PHP domain HQ611_RS09395 PF14579 Helix-hairpin-helix motif HQ611_RS09395 PF17657 Bacterial DNA polymerase III alpha subunit finger domain HQ611_RS09395 PF07733 Bacterial DNA polymerase III alpha NTPase domain HQ611_RS09395 PF14480 DNA polymerase III polC-type N-terminus I HQ611_RS09395 PF11490 DNA polymerase III polC-type N-terminus II HQ611_RS09400 PF01476 LysM domain HQ611_RS09400 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase HQ611_RS09405 PF03129 Anticodon binding domain HQ611_RS09405 PF04073 Aminoacyl-tRNA editing domain HQ611_RS09405 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HQ611_RS09410 PF02163 Peptidase family M50 HQ611_RS09410 PF13180 PDZ domain HQ611_RS09420 PF01255 Putative undecaprenyl diphosphate synthase HQ611_RS09425 PF02699 Preprotein translocase subunit HQ611_RS09435 PF00390 Malic enzyme, N-terminal domain HQ611_RS09435 PF03949 Malic enzyme, NAD binding domain HQ611_RS09440 PF03390 2-hydroxycarboxylate transporter family HQ611_RS09445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQ611_RS09445 PF00989 PAS fold HQ611_RS09445 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain HQ611_RS09445 PF17203 Single cache domain 3 HQ611_RS09450 PF00072 Response regulator receiver domain HQ611_RS09455 PF16363 GDP-mannose 4,6 dehydratase HQ611_RS09460 PF00128 Alpha amylase, catalytic domain HQ611_RS09465 PF03459 TOBE domain HQ611_RS09465 PF17912 MalK OB fold domain HQ611_RS09465 PF00005 ABC transporter HQ611_RS09470 PF13556 PucR C-terminal helix-turn-helix domain HQ611_RS09475 PF01263 Aldose 1-epimerase HQ611_RS09480 PF01791 DeoC/LacD family aldolase HQ611_RS09485 PF00294 pfkB family carbohydrate kinase HQ611_RS09490 PF02502 Ribose/Galactose Isomerase HQ611_RS09495 PF02502 Ribose/Galactose Isomerase HQ611_RS09500 PF02973 Sialidase, N-terminal domain HQ611_RS09500 PF13088 BNR repeat-like domain HQ611_RS09500 PF04650 YSIRK type signal peptide HQ611_RS09520 PF00455 DeoR C terminal sensor domain HQ611_RS09520 PF08220 DeoR-like helix-turn-helix domain HQ611_RS09535 PF02580 D-Tyr-tRNA(Tyr) deacylase HQ611_RS09540 PF13291 ACT domain HQ611_RS09540 PF04607 Region found in RelA / SpoT proteins HQ611_RS09540 PF02824 TGS domain HQ611_RS09545 PF02872 5'-nucleotidase, C-terminal domain HQ611_RS09545 PF00149 Calcineurin-like phosphoesterase HQ611_RS09550 PF07972 NrdI Flavodoxin like HQ611_RS09555 PF05343 M42 glutamyl aminopeptidase HQ611_RS09570 PF12833 Helix-turn-helix domain HQ611_RS09570 PF00072 Response regulator receiver domain HQ611_RS09575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQ611_RS09575 PF06580 Histidine kinase HQ611_RS09580 PF03613 PTS system mannose/fructose/sorbose family IID component HQ611_RS09585 PF03609 PTS system sorbose-specific iic component HQ611_RS09590 PF03830 PTS system sorbose subfamily IIB component HQ611_RS09600 PF01168 Alanine racemase, N-terminal domain HQ611_RS09600 PF00842 Alanine racemase, C-terminal domain HQ611_RS09600 PF01757 Acyltransferase family HQ611_RS09625 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain HQ611_RS09625 PF17203 Single cache domain 3 HQ611_RS09625 PF00989 PAS fold HQ611_RS09625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQ611_RS09630 PF00072 Response regulator receiver domain HQ611_RS09630 PF04397 LytTr DNA-binding domain HQ611_RS09635 PF03372 Endonuclease/Exonuclease/phosphatase family HQ611_RS09640 PF02378 Phosphotransferase system, EIIC HQ611_RS09640 PF00367 phosphotransferase system, EIIB HQ611_RS09640 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 HQ611_RS09645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQ611_RS09645 PF00989 PAS fold HQ611_RS09645 PF16736 Single Cache-like HQ611_RS09645 PF00512 His Kinase A (phospho-acceptor) domain HQ611_RS09650 PF00486 Transcriptional regulatory protein, C terminal HQ611_RS09650 PF00072 Response regulator receiver domain HQ611_RS09655 PF01895 PhoU domain HQ611_RS09660 PF00005 ABC transporter HQ611_RS09665 PF00528 Binding-protein-dependent transport system inner membrane component HQ611_RS09670 PF00528 Binding-protein-dependent transport system inner membrane component HQ611_RS09675 PF12849 PBP superfamily domain HQ611_RS09685 PF04452 RNA methyltransferase HQ611_RS09700 PF13411 MerR HTH family regulatory protein HQ611_RS09700 PF07739 TipAS antibiotic-recognition domain HQ611_RS09710 PF00293 NUDIX domain HQ611_RS09735 PF00583 Acetyltransferase (GNAT) family HQ611_RS09740 PF16193 AAA C-terminal domain HQ611_RS09740 PF05496 Holliday junction DNA helicase RuvB P-loop domain HQ611_RS09740 PF12002 MgsA AAA+ ATPase C terminal HQ611_RS09780 PF06013 Proteins of 100 residues with WXG HQ611_RS09835 PF00005 ABC transporter HQ611_RS09845 PF01381 Helix-turn-helix HQ611_RS09855 PF03819 MazG nucleotide pyrophosphohydrolase domain HQ611_RS09860 PF03641 Possible lysine decarboxylase HQ611_RS09870 PF00581 Rhodanese-like domain HQ611_RS09875 PF07373 CAMP factor (Cfa) HQ611_RS09885 PF00465 Iron-containing alcohol dehydrogenase HQ611_RS09895 PF02574 Homocysteine S-methyltransferase HQ611_RS09895 PF02219 Methylenetetrahydrofolate reductase HQ611_RS09900 PF08267 Cobalamin-independent synthase, N-terminal domain HQ611_RS09900 PF01717 Cobalamin-independent synthase, Catalytic domain HQ611_RS09910 PF03591 AzlC protein HQ611_RS09915 PF02225 PA domain HQ611_RS09915 PF06280 Fn3-like domain HQ611_RS09915 PF00082 Subtilase family HQ611_RS09920 PF00072 Response regulator receiver domain HQ611_RS09920 PF00486 Transcriptional regulatory protein, C terminal HQ611_RS09925 PF00672 HAMP domain HQ611_RS09925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQ611_RS09925 PF00512 His Kinase A (phospho-acceptor) domain HQ611_RS09935 PF08264 Anticodon-binding domain of tRNA HQ611_RS09935 PF00133 tRNA synthetases class I (I, L, M and V) HQ611_RS09935 PF13603 Leucyl-tRNA synthetase, Domain 2 HQ611_RS09935 PF09334 tRNA synthetases class I (M) HQ611_RS09940 PF07690 Major Facilitator Superfamily HQ611_RS09945 PF01734 Patatin-like phospholipase HQ611_RS09950 PF00467 KOW motif HQ611_RS09950 PF02357 Transcription termination factor nusG HQ611_RS09955 PF17573 GA-like domain HQ611_RS09955 PF00746 LPXTG cell wall anchor motif HQ611_RS09955 PF01378 B domain HQ611_RS09965 PF00471 Ribosomal protein L33 HQ611_RS09970 PF00912 Transglycosylase HQ611_RS09970 PF00905 Penicillin binding protein transpeptidase domain HQ611_RS09975 PF01479 S4 domain HQ611_RS09975 PF00849 RNA pseudouridylate synthase HQ611_RS09985 PF01676 Metalloenzyme superfamily HQ611_RS09990 PF01791 DeoC/LacD family aldolase HQ611_RS09995 PF07670 Nucleoside recognition HQ611_RS09995 PF07662 Na+ dependent nucleoside transporter C-terminus HQ611_RS09995 PF01773 Na+ dependent nucleoside transporter N-terminus HQ611_RS10000 PF01048 Phosphorylase superfamily HQ611_RS10015 PF00118 TCP-1/cpn60 chaperonin family HQ611_RS10020 PF00166 Chaperonin 10 Kd subunit HQ611_RS10025 PF00005 ABC transporter HQ611_RS10030 PF02653 Branched-chain amino acid transport system / permease component HQ611_RS10045 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HQ611_RS10050 PF03883 Peroxide stress protein YaaA HQ611_RS10065 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HQ611_RS10075 PF03477 ATP cone domain HQ611_RS10075 PF13597 Anaerobic ribonucleoside-triphosphate reductase HQ611_RS10085 PF06949 Protein of unknown function (DUF1292) HQ611_RS10090 PF03652 Holliday junction resolvase HQ611_RS10095 PF06135 IreB regulatory phosphoprotein HQ611_RS10100 PF03960 ArsC family HQ611_RS10105 PF00154 recA bacterial DNA recombination protein HQ611_RS10110 PF02464 Competence-damaged protein HQ611_RS10110 PF18146 Damage-inducible protein CinA KH domain HQ611_RS10110 PF00994 Probable molybdopterin binding domain HQ611_RS10115 PF03352 Methyladenine glycosylase HQ611_RS10120 PF07499 RuvA, C-terminal domain HQ611_RS10120 PF01330 RuvA N terminal domain HQ611_RS10130 PF01119 DNA mismatch repair protein, C-terminal domain HQ611_RS10130 PF08676 MutL C terminal dimerisation domain HQ611_RS10135 PF00313 'Cold-shock' DNA-binding domain HQ611_RS10140 PF01624 MutS domain I HQ611_RS10140 PF05188 MutS domain II HQ611_RS10140 PF05192 MutS domain III HQ611_RS10140 PF05190 MutS family domain IV HQ611_RS10140 PF00488 MutS domain V HQ611_RS10145 PF02863 Arginine repressor, C-terminal domain HQ611_RS10145 PF01316 Arginine repressor, DNA binding domain HQ611_RS10150 PF03485 Arginyl tRNA synthetase N terminal domain HQ611_RS10150 PF05746 DALR anticodon binding domain HQ611_RS10150 PF00750 tRNA synthetases class I (R) HQ611_RS10160 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) HQ611_RS10160 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 HQ611_RS10165 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) HQ611_RS10165 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 HQ611_RS10170 PF00152 tRNA synthetases class II (D, K and N) HQ611_RS10170 PF02938 GAD domain HQ611_RS10170 PF01336 OB-fold nucleic acid binding domain HQ611_RS10175 PF03129 Anticodon binding domain HQ611_RS10175 PF13393 Histidyl-tRNA synthetase HQ611_RS10180 PF01783 Ribosomal L32p protein family HQ611_RS10185 PF00471 Ribosomal protein L33 HQ611_RS10200 PF01022 Bacterial regulatory protein, arsR family HQ611_RS10255 PF00486 Transcriptional regulatory protein, C terminal HQ611_RS10255 PF00072 Response regulator receiver domain HQ611_RS10260 PF00512 His Kinase A (phospho-acceptor) domain HQ611_RS10260 PF18719 ArlS sensor domain HQ611_RS10260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQ611_RS10265 PF03606 C4-dicarboxylate anaerobic carrier HQ611_RS10270 PF00696 Amino acid kinase family HQ611_RS10275 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain HQ611_RS10275 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain HQ611_RS10280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQ611_RS10280 PF00512 His Kinase A (phospho-acceptor) domain HQ611_RS10280 PF00989 PAS fold HQ611_RS10285 PF00072 Response regulator receiver domain HQ611_RS10285 PF08664 YcbB domain HQ611_RS10290 PF00005 ABC transporter HQ611_RS10290 PF00571 CBS domain HQ611_RS10295 PF00528 Binding-protein-dependent transport system inner membrane component HQ611_RS10300 PF09924 Uncharacterised conserved protein (DUF2156) HQ611_RS10300 PF03706 Lysylphosphatidylglycerol synthase TM region HQ611_RS10305 PF00561 alpha/beta hydrolase fold HQ611_RS10310 PF06993 Protein of unknown function (DUF1304) HQ611_RS10315 PF01061 ABC-2 type transporter HQ611_RS10440 PF14659 Phage integrase, N-terminal SAM-like domain HQ611_RS10440 PF00589 Phage integrase family HQ611_RS10445 PF00163 Ribosomal protein S4/S9 N-terminal domain HQ611_RS10445 PF01479 S4 domain HQ611_RS10455 PF00772 DnaB-like helicase N terminal domain HQ611_RS10455 PF03796 DnaB-like helicase C terminal domain HQ611_RS10460 PF01281 Ribosomal protein L9, N-terminal domain HQ611_RS10460 PF03948 Ribosomal protein L9, C-terminal domain HQ611_RS10465 PF01368 DHH family HQ611_RS10465 PF02272 DHHA1 domain HQ611_RS10470 PF01134 Glucose inhibited division protein A HQ611_RS10470 PF13932 GidA associated domain HQ611_RS10475 PF01914 MarC family integral membrane protein HQ611_RS10485 PF03315 Serine dehydratase beta chain HQ611_RS10485 PF01842 ACT domain HQ611_RS10490 PF03313 Serine dehydratase alpha chain HQ611_RS10495 PF06737 Transglycosylase-like domain HQ611_RS10500 PF05257 CHAP domain HQ611_RS10500 PF01476 LysM domain HQ611_RS10505 PF02361 Cobalt transport protein HQ611_RS10510 PF00005 ABC transporter HQ611_RS10515 PF00005 ABC transporter HQ611_RS10520 PF01066 CDP-alcohol phosphatidyltransferase HQ611_RS10525 PF00675 Insulinase (Peptidase family M16) HQ611_RS10525 PF05193 Peptidase M16 inactive domain HQ611_RS10530 PF05193 Peptidase M16 inactive domain HQ611_RS10540 PF02463 RecF/RecN/SMC N terminal domain HQ611_RS10545 PF06800 Sugar transport protein HQ611_RS10555 PF00571 CBS domain HQ611_RS10555 PF00478 IMP dehydrogenase / GMP reductase domain HQ611_RS10560 PF01316 Arginine repressor, DNA binding domain HQ611_RS10560 PF02863 Arginine repressor, C-terminal domain HQ611_RS10565 PF13545 Crp-like helix-turn-helix domain HQ611_RS10565 PF00027 Cyclic nucleotide-binding domain HQ611_RS10580 PF13673 Acetyltransferase (GNAT) domain HQ611_RS10585 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain HQ611_RS10585 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain HQ611_RS10590 PF13520 Amino acid permease HQ611_RS10595 PF00696 Amino acid kinase family HQ611_RS10600 PF00579 tRNA synthetases class I (W and Y) HQ611_RS10610 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) HQ611_RS10610 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 HQ611_RS10615 PF00005 ABC transporter HQ611_RS10615 PF12848 ABC transporter HQ611_RS10620 PF09586 Bacterial membrane protein YfhO HQ611_RS10640 PF02590 Predicted SPOUT methyltransferase HQ611_RS10645 PF13180 PDZ domain HQ611_RS10650 PF17762 HTH domain found in ParB protein HQ611_RS10650 PF02195 ParB-like nuclease domain HQ611_RS10660 PF01431 Peptidase family M13 HQ611_RS10660 PF05649 Peptidase family M13 HQ611_RS10665 PF01431 Peptidase family M13 HQ611_RS10665 PF05649 Peptidase family M13