locus-tag class description HQ612_RS00005 PF00308 Bacterial dnaA protein HQ612_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix HQ612_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain HQ612_RS00010 PF02767 DNA polymerase III beta subunit, central domain HQ612_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain HQ612_RS00030 PF01926 50S ribosome-binding GTPase HQ612_RS00030 PF06071 Protein of unknown function (DUF933) HQ612_RS00035 PF01195 Peptidyl-tRNA hydrolase HQ612_RS00040 PF03461 TRCF domain HQ612_RS00040 PF00271 Helicase conserved C-terminal domain HQ612_RS00040 PF17757 UvrB interaction domain HQ612_RS00040 PF02559 CarD-like/TRCF domain HQ612_RS00040 PF00270 DEAD/DEAH box helicase HQ612_RS00045 PF01479 S4 domain HQ612_RS00065 PF01171 PP-loop family HQ612_RS00070 PF00156 Phosphoribosyl transferase domain HQ612_RS00075 PF00004 ATPase family associated with various cellular activities (AAA) HQ612_RS00075 PF17862 AAA+ lid domain HQ612_RS00075 PF06480 FtsH Extracellular HQ612_RS00075 PF01434 Peptidase family M41 HQ612_RS00255 PF14572 Phosphoribosyl synthetase-associated domain HQ612_RS00255 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase HQ612_RS00260 PF00155 Aminotransferase class I and II HQ612_RS00265 PF11967 Recombination protein O N terminal HQ612_RS00265 PF02565 Recombination protein O C terminal HQ612_RS00275 PF02504 Fatty acid synthesis protein HQ612_RS00285 PF01259 SAICAR synthetase HQ612_RS00290 PF00586 AIR synthase related protein, N-terminal domain HQ612_RS00290 PF02769 AIR synthase related protein, C-terminal domain HQ612_RS00290 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain HQ612_RS00295 PF13537 Glutamine amidotransferase domain HQ612_RS00295 PF00156 Phosphoribosyl transferase domain HQ612_RS00300 PF00586 AIR synthase related protein, N-terminal domain HQ612_RS00300 PF02769 AIR synthase related protein, C-terminal domain HQ612_RS00305 PF00551 Formyl transferase HQ612_RS00315 PF01808 AICARFT/IMPCHase bienzyme HQ612_RS00315 PF02142 MGS-like domain HQ612_RS00320 PF01476 LysM domain HQ612_RS00320 PF01551 Peptidase family M23 HQ612_RS00330 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase HQ612_RS00340 PF00528 Binding-protein-dependent transport system inner membrane component HQ612_RS00345 PF00528 Binding-protein-dependent transport system inner membrane component HQ612_RS00360 PF00701 Dihydrodipicolinate synthetase family HQ612_RS00365 PF00480 ROK family HQ612_RS00370 PF05448 Acetyl xylan esterase (AXE1) HQ612_RS00380 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain HQ612_RS00380 PF02843 Phosphoribosylglycinamide synthetase, C domain HQ612_RS00380 PF02844 Phosphoribosylglycinamide synthetase, N domain HQ612_RS00385 PF00731 AIR carboxylase HQ612_RS00390 PF02222 ATP-grasp domain HQ612_RS00390 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain HQ612_RS00400 PF10397 Adenylosuccinate lyase C-terminus HQ612_RS00400 PF00206 Lyase HQ612_RS00410 PF05496 Holliday junction DNA helicase RuvB P-loop domain HQ612_RS00410 PF05491 RuvB C-terminal winged helix domain HQ612_RS00410 PF17864 RuvB AAA lid domain HQ612_RS00415 PF01451 Low molecular weight phosphotyrosine protein phosphatase HQ612_RS00425 PF01757 Acyltransferase family HQ612_RS00430 PF00171 Aldehyde dehydrogenase family HQ612_RS00430 PF00465 Iron-containing alcohol dehydrogenase HQ612_RS00435 PF08240 Alcohol dehydrogenase GroES-like domain HQ612_RS00435 PF00107 Zinc-binding dehydrogenase HQ612_RS00440 PF00291 Pyridoxal-phosphate dependent enzyme HQ612_RS00440 PF14821 Threonine synthase N terminus HQ612_RS00445 PF01554 MatE HQ612_RS00450 PF00338 Ribosomal protein S10p/S20e HQ612_RS00455 PF00297 Ribosomal protein L3 HQ612_RS00460 PF00573 Ribosomal protein L4/L1 family HQ612_RS00465 PF00276 Ribosomal protein L23 HQ612_RS00470 PF00181 Ribosomal Proteins L2, RNA binding domain HQ612_RS00470 PF03947 Ribosomal Proteins L2, C-terminal domain HQ612_RS00475 PF00203 Ribosomal protein S19 HQ612_RS00480 PF00237 Ribosomal protein L22p/L17e HQ612_RS00485 PF07650 KH domain HQ612_RS00485 PF00189 Ribosomal protein S3, C-terminal domain HQ612_RS00490 PF00252 Ribosomal protein L16p/L10e HQ612_RS00495 PF00831 Ribosomal L29 protein HQ612_RS00500 PF00366 Ribosomal protein S17 HQ612_RS00505 PF00238 Ribosomal protein L14p/L23e HQ612_RS00510 PF00467 KOW motif HQ612_RS00510 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 HQ612_RS00515 PF00673 ribosomal L5P family C-terminus HQ612_RS00515 PF00281 Ribosomal protein L5 HQ612_RS00520 PF00253 Ribosomal protein S14p/S29e HQ612_RS00525 PF00410 Ribosomal protein S8 HQ612_RS00530 PF00347 Ribosomal protein L6 HQ612_RS00535 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast HQ612_RS00540 PF00333 Ribosomal protein S5, N-terminal domain HQ612_RS00540 PF03719 Ribosomal protein S5, C-terminal domain HQ612_RS00545 PF00327 Ribosomal protein L30p/L7e HQ612_RS00550 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A HQ612_RS00555 PF00344 SecY translocase HQ612_RS00565 PF01176 Translation initiation factor 1A / IF-1 HQ612_RS00570 PF00444 Ribosomal protein L36 HQ612_RS00575 PF00416 Ribosomal protein S13/S18 HQ612_RS00580 PF00411 Ribosomal protein S11 HQ612_RS00585 PF01000 RNA polymerase Rpb3/RpoA insert domain HQ612_RS00585 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain HQ612_RS00585 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain HQ612_RS00590 PF01196 Ribosomal protein L17 HQ612_RS00710 PF11208 Protein of unknown function (DUF2992) HQ612_RS00725 PF02557 D-alanyl-D-alanine carboxypeptidase HQ612_RS00730 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase HQ612_RS00730 PF13457 GW (Gly-Tryp) dipeptide domain HQ612_RS00735 PF01628 HrcA protein C terminal domain HQ612_RS00735 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding HQ612_RS00740 PF01025 GrpE HQ612_RS00745 PF00012 Hsp70 protein HQ612_RS00750 PF00684 DnaJ central domain HQ612_RS00750 PF00226 DnaJ domain HQ612_RS00750 PF01556 DnaJ C terminal domain HQ612_RS00755 PF00155 Aminotransferase class I and II HQ612_RS00755 PF00392 Bacterial regulatory proteins, gntR family HQ612_RS00760 PF01416 tRNA pseudouridine synthase HQ612_RS00765 PF08543 Phosphomethylpyrimidine kinase HQ612_RS00770 PF07155 ECF-type riboflavin transporter, S component HQ612_RS00775 PF04260 Protein of unknown function (DUF436) HQ612_RS00780 PF00924 Mechanosensitive ion channel HQ612_RS00785 PF05697 Bacterial trigger factor protein (TF) HQ612_RS00785 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HQ612_RS00785 PF05698 Bacterial trigger factor protein (TF) C-terminus HQ612_RS00790 PF05066 HB1, ASXL, restriction endonuclease HTH domain HQ612_RS00795 PF06418 CTP synthase N-terminus HQ612_RS00795 PF00117 Glutamine amidotransferase class-I HQ612_RS00810 PF00692 dUTPase HQ612_RS00815 PF18073 Rubredoxin metal binding domain HQ612_RS00820 PF00484 Carbonic anhydrase HQ612_RS00825 PF07992 Pyridine nucleotide-disulphide oxidoreductase HQ612_RS00825 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HQ612_RS00830 PF00749 tRNA synthetases class I (E and Q), catalytic domain HQ612_RS00835 PF13407 Periplasmic binding protein domain HQ612_RS00840 PF02653 Branched-chain amino acid transport system / permease component HQ612_RS00845 PF00005 ABC transporter HQ612_RS00850 PF05025 RbsD / FucU transport protein family HQ612_RS00855 PF00294 pfkB family carbohydrate kinase HQ612_RS00860 PF00356 Bacterial regulatory proteins, lacI family HQ612_RS00865 PF02687 FtsX-like permease family HQ612_RS00870 PF00005 ABC transporter HQ612_RS00875 PF00072 Response regulator receiver domain HQ612_RS00875 PF00486 Transcriptional regulatory protein, C terminal HQ612_RS00880 PF00512 His Kinase A (phospho-acceptor) domain HQ612_RS00880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQ612_RS00885 PF00764 Arginosuccinate synthase HQ612_RS00890 PF14698 Argininosuccinate lyase C-terminal HQ612_RS00890 PF00206 Lyase HQ612_RS00895 PF01116 Fructose-bisphosphate aldolase class-II HQ612_RS00900 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain HQ612_RS00900 PF00056 lactate/malate dehydrogenase, NAD binding domain HQ612_RS00905 PF00830 Ribosomal L28 family HQ612_RS00910 PF03780 Asp23 family, cell envelope-related function HQ612_RS00915 PF13684 Dihydroxyacetone kinase family HQ612_RS00915 PF02734 DAK2 domain HQ612_RS00935 PF00005 ABC transporter HQ612_RS00940 PF00528 Binding-protein-dependent transport system inner membrane component HQ612_RS00950 PF02673 Bacitracin resistance protein BacA HQ612_RS00955 PF05389 Negative regulator of genetic competence (MecA) HQ612_RS00960 PF00953 Glycosyl transferase family 4 HQ612_RS00965 PF00005 ABC transporter HQ612_RS00970 PF01458 Uncharacterized protein family (UPF0051) HQ612_RS00975 PF00266 Aminotransferase class-V HQ612_RS00980 PF01592 NifU-like N terminal domain HQ612_RS00985 PF01458 Uncharacterized protein family (UPF0051) HQ612_RS00990 PF07943 Penicillin-binding protein 5, C-terminal domain HQ612_RS00990 PF00768 D-alanyl-D-alanine carboxypeptidase HQ612_RS00995 PF07943 Penicillin-binding protein 5, C-terminal domain HQ612_RS00995 PF00768 D-alanyl-D-alanine carboxypeptidase HQ612_RS01000 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HQ612_RS01005 PF00528 Binding-protein-dependent transport system inner membrane component HQ612_RS01010 PF12911 N-terminal TM domain of oligopeptide transport permease C HQ612_RS01010 PF00528 Binding-protein-dependent transport system inner membrane component HQ612_RS01015 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HQ612_RS01015 PF00005 ABC transporter HQ612_RS01020 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HQ612_RS01020 PF00005 ABC transporter HQ612_RS01050 PF00288 GHMP kinases N terminal domain HQ612_RS01050 PF08544 GHMP kinases C terminal HQ612_RS01055 PF01047 MarR family HQ612_RS01060 PF00005 ABC transporter HQ612_RS01065 PF00950 ABC 3 transport family HQ612_RS01075 PF01479 S4 domain HQ612_RS01075 PF00579 tRNA synthetases class I (W and Y) HQ612_RS01080 PF00912 Transglycosylase HQ612_RS01080 PF00905 Penicillin binding protein transpeptidase domain HQ612_RS01085 PF04563 RNA polymerase beta subunit HQ612_RS01085 PF04560 RNA polymerase Rpb2, domain 7 HQ612_RS01085 PF04561 RNA polymerase Rpb2, domain 2 HQ612_RS01085 PF04565 RNA polymerase Rpb2, domain 3 HQ612_RS01085 PF10385 RNA polymerase beta subunit external 1 domain HQ612_RS01085 PF00562 RNA polymerase Rpb2, domain 6 HQ612_RS01090 PF04998 RNA polymerase Rpb1, domain 5 HQ612_RS01090 PF05000 RNA polymerase Rpb1, domain 4 HQ612_RS01090 PF04983 RNA polymerase Rpb1, domain 3 HQ612_RS01090 PF00623 RNA polymerase Rpb1, domain 2 HQ612_RS01090 PF04997 RNA polymerase Rpb1, domain 1 HQ612_RS01100 PF00437 Type II/IV secretion system protein HQ612_RS01105 PF00482 Type II secretion system (T2SS), protein F HQ612_RS01140 PF00871 Acetokinase family HQ612_RS01165 PF14748 Pyrroline-5-carboxylate reductase dimerisation HQ612_RS01165 PF03807 NADP oxidoreductase coenzyme F420-dependent HQ612_RS01170 PF05343 M42 glutamyl aminopeptidase HQ612_RS01185 PF00085 Thioredoxin HQ612_RS01190 PF01588 Putative tRNA binding domain HQ612_RS01190 PF14794 Domain of unknown function (DUF4479) HQ612_RS01200 PF00436 Single-strand binding protein family HQ612_RS01205 PF13419 Haloacid dehalogenase-like hydrolase HQ612_RS01210 PF06580 Histidine kinase HQ612_RS01210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQ612_RS01210 PF07694 5TMR of 5TMR-LYT HQ612_RS01215 PF04397 LytTr DNA-binding domain HQ612_RS01215 PF00072 Response regulator receiver domain HQ612_RS01220 PF03788 LrgA family HQ612_RS01225 PF04172 LrgB-like family HQ612_RS01230 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HQ612_RS01235 PF00528 Binding-protein-dependent transport system inner membrane component HQ612_RS01240 PF00528 Binding-protein-dependent transport system inner membrane component HQ612_RS01240 PF12911 N-terminal TM domain of oligopeptide transport permease C HQ612_RS01245 PF12558 ATP-binding cassette cobalt transporter HQ612_RS01245 PF00005 ABC transporter HQ612_RS01250 PF00005 ABC transporter HQ612_RS01255 PF00367 phosphotransferase system, EIIB HQ612_RS01255 PF02378 Phosphotransferase system, EIIC HQ612_RS01260 PF00128 Alpha amylase, catalytic domain HQ612_RS01260 PF16657 Maltogenic Amylase, C-terminal domain HQ612_RS01265 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HQ612_RS01270 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HQ612_RS01275 PF03611 PTS system sugar-specific permease component HQ612_RS01280 PF00456 Transketolase, thiamine diphosphate binding domain HQ612_RS01285 PF02779 Transketolase, pyrimidine binding domain HQ612_RS01285 PF02780 Transketolase, C-terminal domain HQ612_RS01285 PF13292 1-deoxy-D-xylulose-5-phosphate synthase HQ612_RS01290 PF00175 Oxidoreductase NAD-binding domain HQ612_RS01290 PF00111 2Fe-2S iron-sulfur cluster binding domain HQ612_RS01290 PF00970 Oxidoreductase FAD-binding domain HQ612_RS01295 PF00312 Ribosomal protein S15 HQ612_RS01300 PF00013 KH domain HQ612_RS01300 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain HQ612_RS01300 PF01138 3' exoribonuclease family, domain 1 HQ612_RS01300 PF03725 3' exoribonuclease family, domain 2 HQ612_RS01300 PF00575 S1 RNA binding domain HQ612_RS01310 PF00132 Bacterial transferase hexapeptide (six repeats) HQ612_RS01310 PF06426 Serine acetyltransferase, N-terminal HQ612_RS01320 PF09190 DALR domain HQ612_RS01320 PF01406 tRNA synthetases class I (C) catalytic domain HQ612_RS01325 PF00636 Ribonuclease III domain HQ612_RS01330 PF08032 RNA 2'-O ribose methyltransferase substrate binding HQ612_RS01330 PF00588 SpoU rRNA Methylase family HQ612_RS01340 PF02645 Uncharacterised protein, DegV family COG1307 HQ612_RS01350 PF00572 Ribosomal protein L13 HQ612_RS01355 PF00380 Ribosomal protein S9/S16 HQ612_RS01360 PF00589 Phage integrase family HQ612_RS01360 PF02899 Phage integrase, N-terminal SAM-like domain HQ612_RS01395 PF02486 Replication initiation factor HQ612_RS01405 PF01076 Plasmid recombination enzyme HQ612_RS01425 PF06013 Proteins of 100 residues with WXG HQ612_RS01460 PF01381 Helix-turn-helix HQ612_RS01465 PF07690 Major Facilitator Superfamily HQ612_RS01470 PF00528 Binding-protein-dependent transport system inner membrane component HQ612_RS01475 PF04069 Substrate binding domain of ABC-type glycine betaine transport system HQ612_RS01480 PF00528 Binding-protein-dependent transport system inner membrane component HQ612_RS01485 PF00571 CBS domain HQ612_RS01485 PF00005 ABC transporter HQ612_RS01605 PF00117 Glutamine amidotransferase class-I HQ612_RS01605 PF00958 GMP synthase C terminal domain HQ612_RS01605 PF03352 Methyladenine glycosylase HQ612_RS01605 PF13302 Acetyltransferase (GNAT) domain HQ612_RS01605 PF13673 Acetyltransferase (GNAT) domain HQ612_RS01620 PF04297 Putative helix-turn-helix protein, YlxM / p13 like HQ612_RS01630 PF00440 Bacterial regulatory proteins, tetR family HQ612_RS01640 PF00005 ABC transporter HQ612_RS01650 PF03551 Transcriptional regulator PadR-like family HQ612_RS01660 PF01979 Amidohydrolase family HQ612_RS01665 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family HQ612_RS01670 PF02091 Glycyl-tRNA synthetase alpha subunit HQ612_RS01675 PF02525 Flavodoxin-like fold HQ612_RS01680 PF02092 Glycyl-tRNA synthetase beta subunit HQ612_RS01680 PF05746 DALR anticodon binding domain HQ612_RS01685 PF05979 Bacterial protein of unknown function (DUF896) HQ612_RS01695 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HQ612_RS01695 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HQ612_RS01700 PF01266 FAD dependent oxidoreductase HQ612_RS01700 PF16901 C-terminal domain of alpha-glycerophosphate oxidase HQ612_RS01705 PF00230 Major intrinsic protein HQ612_RS01710 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HQ612_RS01710 PF07992 Pyridine nucleotide-disulphide oxidoreductase HQ612_RS01720 PF02779 Transketolase, pyrimidine binding domain HQ612_RS01720 PF00456 Transketolase, thiamine diphosphate binding domain HQ612_RS01720 PF02780 Transketolase, C-terminal domain HQ612_RS01730 PF00005 ABC transporter HQ612_RS01740 PF00367 phosphotransferase system, EIIB HQ612_RS01740 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 HQ612_RS01740 PF02378 Phosphotransferase system, EIIC HQ612_RS01745 PF00696 Amino acid kinase family HQ612_RS01750 PF00171 Aldehyde dehydrogenase family HQ612_RS01755 PF01795 MraW methylase family HQ612_RS01765 PF03717 Penicillin-binding Protein dimerisation domain HQ612_RS01765 PF03793 PASTA domain HQ612_RS01765 PF00905 Penicillin binding protein transpeptidase domain HQ612_RS01770 PF00953 Glycosyl transferase family 4 HQ612_RS01770 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 HQ612_RS01775 PF00270 DEAD/DEAH box helicase HQ612_RS01775 PF00271 Helicase conserved C-terminal domain HQ612_RS01780 PF00497 Bacterial extracellular solute-binding proteins, family 3 HQ612_RS01785 PF00528 Binding-protein-dependent transport system inner membrane component HQ612_RS01790 PF00005 ABC transporter HQ612_RS01800 PF07992 Pyridine nucleotide-disulphide oxidoreductase HQ612_RS01805 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family HQ612_RS01805 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain HQ612_RS01805 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain HQ612_RS01810 PF02540 NAD synthase HQ612_RS01815 PF03051 Peptidase C1-like family HQ612_RS01820 PF00912 Transglycosylase HQ612_RS01820 PF00905 Penicillin binding protein transpeptidase domain HQ612_RS01825 PF03838 Recombination protein U HQ612_RS01830 PF06908 YspA SLOG family HQ612_RS01835 PF05103 DivIVA protein HQ612_RS01845 PF02926 THUMP domain HQ612_RS01845 PF01170 Putative RNA methylase family UPF0020 HQ612_RS01850 PF18041 MapZ extracellular domain 1 HQ612_RS01850 PF18708 MapZ extracellular C-terminal domain 2 HQ612_RS01855 PF02664 S-Ribosylhomocysteinase (LuxS) HQ612_RS01860 PF12072 Domain of unknown function (DUF3552) HQ612_RS01860 PF00013 KH domain HQ612_RS01860 PF01966 HD domain HQ612_RS01865 PF00005 ABC transporter HQ612_RS01880 PF00072 Response regulator receiver domain HQ612_RS01880 PF00196 Bacterial regulatory proteins, luxR family HQ612_RS01885 PF06736 Protein of unknown function (DUF1211) HQ612_RS01890 PF00625 Guanylate kinase HQ612_RS01895 PF01192 RNA polymerase Rpb6 HQ612_RS01900 PF17764 3′ DNA-binding domain (3′BD) HQ612_RS01900 PF18319 PriA DNA helicase Cys-rich region (CRR) domain HQ612_RS01900 PF04851 Type III restriction enzyme, res subunit HQ612_RS01900 PF18074 Primosomal protein N C-terminal domain HQ612_RS01900 PF00271 Helicase conserved C-terminal domain HQ612_RS01905 PF02911 Formyl transferase, C-terminal domain HQ612_RS01905 PF00551 Formyl transferase HQ612_RS01910 PF01189 16S rRNA methyltransferase RsmB/F HQ612_RS01910 PF01029 NusB family HQ612_RS01920 PF03793 PASTA domain HQ612_RS01920 PF00069 Protein kinase domain HQ612_RS01930 PF07730 Histidine kinase HQ612_RS01930 PF00672 HAMP domain HQ612_RS01930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQ612_RS01935 PF00196 Bacterial regulatory proteins, luxR family HQ612_RS01935 PF00072 Response regulator receiver domain HQ612_RS01940 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD HQ612_RS01945 PF00575 S1 RNA binding domain HQ612_RS01950 PF04055 Radical SAM superfamily HQ612_RS01955 PF08220 DeoR-like helix-turn-helix domain HQ612_RS01955 PF00455 DeoR C terminal sensor domain HQ612_RS01960 PF13936 Helix-turn-helix domain HQ612_RS01960 PF04198 Putative sugar-binding domain HQ612_RS01965 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit HQ612_RS01975 PF02378 Phosphotransferase system, EIIC HQ612_RS01980 PF01228 Glycine radical HQ612_RS01980 PF02901 Pyruvate formate lyase-like HQ612_RS01985 PF00923 Transaldolase/Fructose-6-phosphate aldolase HQ612_RS01990 PF00465 Iron-containing alcohol dehydrogenase HQ612_RS01995 PF00291 Pyridoxal-phosphate dependent enzyme HQ612_RS02000 PF01205 Uncharacterized protein family UPF0029 HQ612_RS02000 PF09186 Domain of unknown function (DUF1949) HQ612_RS02005 PF04851 Type III restriction enzyme, res subunit HQ612_RS02005 PF00271 Helicase conserved C-terminal domain HQ612_RS02015 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein HQ612_RS02015 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus HQ612_RS02045 PF13840 ACT domain HQ612_RS02045 PF00696 Amino acid kinase family HQ612_RS02050 PF13419 Haloacid dehalogenase-like hydrolase HQ612_RS02055 PF00378 Enoyl-CoA hydratase/isomerase HQ612_RS02065 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal HQ612_RS02065 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III HQ612_RS02070 PF00550 Phosphopantetheine attachment site HQ612_RS02075 PF03060 Nitronate monooxygenase HQ612_RS02080 PF00698 Acyl transferase domain HQ612_RS02090 PF00109 Beta-ketoacyl synthase, N-terminal domain HQ612_RS02090 PF02801 Beta-ketoacyl synthase, C-terminal domain HQ612_RS02095 PF00364 Biotin-requiring enzyme HQ612_RS02100 PF07977 FabA-like domain HQ612_RS02105 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HQ612_RS02105 PF00289 Biotin carboxylase, N-terminal domain HQ612_RS02105 PF02785 Biotin carboxylase C-terminal domain HQ612_RS02110 PF17848 Acetyl-coA carboxylase zinc finger domain HQ612_RS02110 PF01039 Carboxyl transferase domain HQ612_RS02115 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit HQ612_RS02125 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HQ612_RS02125 PF02403 Seryl-tRNA synthetase N-terminal domain HQ612_RS02140 PF03613 PTS system mannose/fructose/sorbose family IID component HQ612_RS02145 PF03609 PTS system sorbose-specific iic component HQ612_RS02150 PF03830 PTS system sorbose subfamily IIB component HQ612_RS02150 PF03610 PTS system fructose IIA component HQ612_RS02170 PF00860 Permease family HQ612_RS02175 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE HQ612_RS02180 PF13302 Acetyltransferase (GNAT) domain HQ612_RS02185 PF03816 Cell envelope-related transcriptional attenuator domain HQ612_RS02195 PF01230 HIT domain HQ612_RS02210 PF00005 ABC transporter HQ612_RS02215 PF05975 Bacterial ABC transporter protein EcsB HQ612_RS02225 PF02390 Putative methyltransferase HQ612_RS02235 PF17384 RimP C-terminal SH3 domain HQ612_RS02235 PF02576 RimP N-terminal domain HQ612_RS02240 PF00575 S1 RNA binding domain HQ612_RS02240 PF08529 NusA N-terminal domain HQ612_RS02240 PF13184 NusA-like KH domain HQ612_RS02245 PF04296 Protein of unknown function (DUF448) HQ612_RS02250 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family HQ612_RS02255 PF00009 Elongation factor Tu GTP binding domain HQ612_RS02255 PF04760 Translation initiation factor IF-2, N-terminal region HQ612_RS02255 PF11987 Translation-initiation factor 2 HQ612_RS02260 PF02033 Ribosome-binding factor A HQ612_RS02265 PF07859 alpha/beta hydrolase fold HQ612_RS02270 PF03965 Penicillinase repressor HQ612_RS02275 PF00403 Heavy-metal-associated domain HQ612_RS02285 PF03458 UPF0126 domain HQ612_RS02295 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain HQ612_RS02295 PF00476 DNA polymerase family A HQ612_RS02295 PF01367 5'-3' exonuclease, C-terminal SAM fold HQ612_RS02300 PF13380 CoA binding domain HQ612_RS02305 PF01475 Ferric uptake regulator family HQ612_RS02315 PF00072 Response regulator receiver domain HQ612_RS02315 PF00486 Transcriptional regulatory protein, C terminal HQ612_RS02320 PF00512 His Kinase A (phospho-acceptor) domain HQ612_RS02320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQ612_RS02330 PF01702 Queuine tRNA-ribosyltransferase HQ612_RS02340 PF02632 BioY family HQ612_RS02345 PF12706 Beta-lactamase superfamily domain HQ612_RS02350 PF14437 MafB19-like deaminase HQ612_RS02360 PF00342 Phosphoglucose isomerase HQ612_RS02365 PF01812 5-formyltetrahydrofolate cyclo-ligase family HQ612_RS02370 PF01694 Rhomboid family HQ612_RS02375 PF02608 ABC transporter substrate-binding protein PnrA-like HQ612_RS02380 PF00483 Nucleotidyl transferase HQ612_RS02385 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus HQ612_RS02385 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus HQ612_RS02390 PF00825 Ribonuclease P HQ612_RS02395 PF02096 60Kd inner membrane protein HQ612_RS02445 PF04167 Protein of unknown function (DUF402) HQ612_RS02450 PF02631 RecX family HQ612_RS02455 PF01938 TRAM domain HQ612_RS02455 PF05958 tRNA (Uracil-5-)-methyltransferase HQ612_RS02465 PF13673 Acetyltransferase (GNAT) domain HQ612_RS02470 PF00082 Subtilase family HQ612_RS02470 PF06280 Fn3-like domain HQ612_RS02470 PF02225 PA domain HQ612_RS02475 PF00535 Glycosyl transferase family 2 HQ612_RS02475 PF01501 Glycosyl transferase family 8 HQ612_RS02480 PF00268 Ribonucleotide reductase, small chain HQ612_RS02485 PF07972 NrdI Flavodoxin like HQ612_RS02490 PF00317 Ribonucleotide reductase, all-alpha domain HQ612_RS02490 PF08343 Ribonucleotide reductase N-terminal HQ612_RS02490 PF02867 Ribonucleotide reductase, barrel domain HQ612_RS02525 PF13411 MerR HTH family regulatory protein HQ612_RS02535 PF00248 Aldo/keto reductase family HQ612_RS02540 PF01545 Cation efflux family HQ612_RS02550 PF12833 Helix-turn-helix domain HQ612_RS02555 PF04650 YSIRK type signal peptide HQ612_RS02555 PF00746 LPXTG cell wall anchor motif HQ612_RS02555 PF17480 AlphaC C-terminal HQ612_RS02555 PF08829 Alpha C protein N terminal HQ612_RS02585 PF14659 Phage integrase, N-terminal SAM-like domain HQ612_RS02585 PF00589 Phage integrase family HQ612_RS02620 PF13302 Acetyltransferase (GNAT) domain HQ612_RS02630 PF08264 Anticodon-binding domain of tRNA HQ612_RS02630 PF00133 tRNA synthetases class I (I, L, M and V) HQ612_RS02630 PF10458 Valyl tRNA synthetase tRNA binding arm HQ612_RS02640 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HQ612_RS02640 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HQ612_RS02650 PF04237 YjbR HQ612_RS02655 PF03590 Aspartate-ammonia ligase HQ612_RS02675 PF01467 Cytidylyltransferase-like HQ612_RS02680 PF05362 Lon protease (S16) C-terminal proteolytic domain HQ612_RS02680 PF13180 PDZ domain HQ612_RS02685 PF02872 5'-nucleotidase, C-terminal domain HQ612_RS02690 PF06265 Protein of unknown function (DUF1027) HQ612_RS02695 PF04055 Radical SAM superfamily HQ612_RS02705 PF00664 ABC transporter transmembrane region HQ612_RS02705 PF00005 ABC transporter HQ612_RS02710 PF00005 ABC transporter HQ612_RS02710 PF00664 ABC transporter transmembrane region HQ612_RS02715 PF00117 Glutamine amidotransferase class-I HQ612_RS02720 PF02632 BioY family HQ612_RS02725 PF04055 Radical SAM superfamily HQ612_RS02725 PF06968 Biotin and Thiamin Synthesis associated domain HQ612_RS02735 PF00108 Thiolase, N-terminal domain HQ612_RS02735 PF02803 Thiolase, C-terminal domain HQ612_RS02745 PF00633 Helix-hairpin-helix motif HQ612_RS02745 PF10576 Iron-sulfur binding domain of endonuclease III HQ612_RS02745 PF00730 HhH-GPD superfamily base excision DNA repair protein HQ612_RS02760 PF00480 ROK family HQ612_RS02765 PF00581 Rhodanese-like domain HQ612_RS02770 PF03144 Elongation factor Tu domain 2 HQ612_RS02770 PF00009 Elongation factor Tu GTP binding domain HQ612_RS02770 PF14492 Elongation Factor G, domain II HQ612_RS02770 PF00679 Elongation factor G C-terminus HQ612_RS02780 PF02875 Mur ligase family, glutamate ligase domain HQ612_RS02780 PF08245 Mur ligase middle domain HQ612_RS02785 PF04101 Glycosyltransferase family 28 C-terminal domain HQ612_RS02785 PF03033 Glycosyltransferase family 28 N-terminal domain HQ612_RS02790 PF08478 POTRA domain, FtsQ-type HQ612_RS02795 PF02491 SHS2 domain inserted in FTSA HQ612_RS02795 PF11983 Membrane-attachment and polymerisation-promoting switch HQ612_RS02800 PF00091 Tubulin/FtsZ family, GTPase domain HQ612_RS02800 PF12327 FtsZ family, C-terminal domain HQ612_RS02805 PF01168 Alanine racemase, N-terminal domain HQ612_RS02810 PF04472 Cell division protein SepF HQ612_RS02815 PF02325 YGGT family HQ612_RS02820 PF17774 Putative RNA-binding domain in YlmH HQ612_RS02820 PF01479 S4 domain HQ612_RS02825 PF05103 DivIVA protein HQ612_RS02830 PF00133 tRNA synthetases class I (I, L, M and V) HQ612_RS02830 PF08264 Anticodon-binding domain of tRNA HQ612_RS02840 PF00293 NUDIX domain HQ612_RS02845 PF10431 C-terminal, D2-small domain, of ClpB protein HQ612_RS02845 PF17871 AAA lid domain HQ612_RS02845 PF07724 AAA domain (Cdc48 subfamily) HQ612_RS02845 PF00004 ATPase family associated with various cellular activities (AAA) HQ612_RS02850 PF08796 Protein of unknown function (DUF1797) HQ612_RS02855 PF00528 Binding-protein-dependent transport system inner membrane component HQ612_RS02860 PF00005 ABC transporter HQ612_RS02865 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HQ612_RS02865 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HQ612_RS02865 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HQ612_RS02865 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HQ612_RS02870 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain HQ612_RS02870 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain HQ612_RS02875 PF01256 Carbohydrate kinase HQ612_RS02880 PF02601 Exonuclease VII, large subunit HQ612_RS02880 PF13742 OB-fold nucleic acid binding domain HQ612_RS02885 PF02609 Exonuclease VII small subunit HQ612_RS02890 PF00348 Polyprenyl synthetase HQ612_RS02895 PF01728 FtsJ-like methyltransferase HQ612_RS02895 PF01479 S4 domain HQ612_RS02900 PF02863 Arginine repressor, C-terminal domain HQ612_RS02900 PF01316 Arginine repressor, DNA binding domain HQ612_RS02905 PF13476 AAA domain HQ612_RS02910 PF02645 Uncharacterised protein, DegV family COG1307 HQ612_RS02915 PF13472 GDSL-like Lipase/Acylhydrolase family HQ612_RS02925 PF00216 Bacterial DNA-binding protein HQ612_RS02935 PF01180 Dihydroorotate dehydrogenase HQ612_RS02945 PF02388 FemAB family HQ612_RS02950 PF02388 FemAB family HQ612_RS02960 PF01966 HD domain HQ612_RS02970 PF00689 Cation transporting ATPase, C-terminus HQ612_RS02970 PF00690 Cation transporter/ATPase, N-terminus HQ612_RS02980 PF06874 Firmicute fructose-1,6-bisphosphatase HQ612_RS02985 PF08331 Domain of unknown function (DUF1730) HQ612_RS02995 PF00005 ABC transporter HQ612_RS03000 PF02687 FtsX-like permease family HQ612_RS03000 PF18075 FtsX extracellular domain HQ612_RS03010 PF00753 Metallo-beta-lactamase superfamily HQ612_RS03020 PF13307 Helicase C-terminal domain HQ612_RS03020 PF00929 Exonuclease HQ612_RS03020 PF04851 Type III restriction enzyme, res subunit HQ612_RS03025 PF00155 Aminotransferase class I and II HQ612_RS03030 PF01336 OB-fold nucleic acid binding domain HQ612_RS03030 PF00152 tRNA synthetases class II (D, K and N) HQ612_RS03040 PF01156 Inosine-uridine preferring nucleoside hydrolase HQ612_RS03050 PF03668 P-loop ATPase protein family HQ612_RS03055 PF01933 Uncharacterised protein family UPF0052 HQ612_RS03060 PF02650 WhiA C-terminal HTH domain HQ612_RS03060 PF14527 WhiA LAGLIDADG-like domain HQ612_RS03060 PF10298 WhiA N-terminal LAGLIDADG-like domain HQ612_RS03065 PF03577 Peptidase family C69 HQ612_RS03070 PF01297 Zinc-uptake complex component A periplasmic HQ612_RS03070 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment HQ612_RS03075 PF01197 Ribosomal protein L31 HQ612_RS03080 PF02272 DHHA1 domain HQ612_RS03080 PF01368 DHH family HQ612_RS03085 PF00962 Adenosine/AMP deaminase HQ612_RS03090 PF00258 Flavodoxin HQ612_RS03095 PF01817 Chorismate mutase type II HQ612_RS03095 PF00793 DAHP synthetase I family HQ612_RS03100 PF00654 Voltage gated chloride channel HQ612_RS03105 PF01245 Ribosomal protein L19 HQ612_RS03115 PF14659 Phage integrase, N-terminal SAM-like domain HQ612_RS03115 PF00589 Phage integrase family HQ612_RS03130 PF01381 Helix-turn-helix HQ612_RS03130 PF08671 Anti-repressor SinI HQ612_RS03160 PF08346 AntA/AntB antirepressor HQ612_RS03160 PF10548 P22AR C-terminal domain HQ612_RS03460 PF00005 ABC transporter HQ612_RS03470 PF00072 Response regulator receiver domain HQ612_RS03470 PF00486 Transcriptional regulatory protein, C terminal HQ612_RS03475 PF00672 HAMP domain HQ612_RS03475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQ612_RS03475 PF00512 His Kinase A (phospho-acceptor) domain HQ612_RS03485 PF05532 CsbD-like HQ612_RS03495 PF01098 Cell cycle protein HQ612_RS03505 PF00204 DNA gyrase B HQ612_RS03505 PF00986 DNA gyrase B subunit, carboxyl terminus HQ612_RS03505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQ612_RS03505 PF01751 Toprim domain HQ612_RS03510 PF06160 Septation ring formation regulator, EzrA HQ612_RS03530 PF03952 Enolase, N-terminal domain HQ612_RS03530 PF00113 Enolase, C-terminal TIM barrel domain HQ612_RS03545 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) HQ612_RS03550 PF01202 Shikimate kinase HQ612_RS03555 PF03816 Cell envelope-related transcriptional attenuator domain HQ612_RS03560 PF05958 tRNA (Uracil-5-)-methyltransferase HQ612_RS03575 PF00398 Ribosomal RNA adenine dimethylase HQ612_RS03625 PF00239 Resolvase, N terminal domain HQ612_RS03625 PF02796 Helix-turn-helix domain of resolvase HQ612_RS03635 PF00589 Phage integrase family HQ612_RS03635 PF02920 DNA binding domain of tn916 integrase HQ612_RS03640 PF09035 Excisionase from transposon Tn916 HQ612_RS03670 PF14492 Elongation Factor G, domain II HQ612_RS03670 PF00679 Elongation factor G C-terminus HQ612_RS03670 PF00009 Elongation factor Tu GTP binding domain HQ612_RS03670 PF03764 Elongation factor G, domain IV HQ612_RS03685 PF00877 NlpC/P60 family HQ612_RS03715 PF02486 Replication initiation factor HQ612_RS03715 PF18106 Rolling Circle replication initiation protein N-terminal domain HQ612_RS03745 PF08829 Alpha C protein N terminal HQ612_RS03745 PF17480 AlphaC C-terminal HQ612_RS03745 PF00746 LPXTG cell wall anchor motif HQ612_RS03745 PF04650 YSIRK type signal peptide HQ612_RS03745 PF08829 Alpha C protein N terminal HQ612_RS03745 PF17480 AlphaC C-terminal HQ612_RS03745 PF04650 YSIRK type signal peptide HQ612_RS03745 PF00746 LPXTG cell wall anchor motif HQ612_RS03765 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain HQ612_RS03765 PF01612 3'-5' exonuclease HQ612_RS03765 PF01367 5'-3' exonuclease, C-terminal SAM fold HQ612_RS03765 PF00476 DNA polymerase family A HQ612_RS03815 PF02773 S-adenosylmethionine synthetase, C-terminal domain HQ612_RS03815 PF00438 S-adenosylmethionine synthetase, N-terminal domain HQ612_RS03815 PF02772 S-adenosylmethionine synthetase, central domain HQ612_RS03830 PF01555 DNA methylase HQ612_RS03835 PF00145 C-5 cytosine-specific DNA methylase HQ612_RS03875 PF00574 Clp protease HQ612_RS03935 PF05105 Bacteriophage holin family HQ612_RS03955 PF07508 Recombinase HQ612_RS03955 PF13408 Recombinase zinc beta ribbon domain HQ612_RS03960 PF00239 Resolvase, N terminal domain HQ612_RS03960 PF02796 Helix-turn-helix domain of resolvase HQ612_RS03970 PF00211 Adenylate and Guanylate cyclase catalytic domain HQ612_RS03970 PF00069 Protein kinase domain HQ612_RS03980 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) HQ612_RS04000 PF00746 LPXTG cell wall anchor motif HQ612_RS04000 PF08829 Alpha C protein N terminal HQ612_RS04000 PF04650 YSIRK type signal peptide HQ612_RS04000 PF17480 AlphaC C-terminal HQ612_RS04090 PF00144 Beta-lactamase HQ612_RS04095 PF00005 ABC transporter HQ612_RS04125 PF00550 Phosphopantetheine attachment site HQ612_RS04130 PF07977 FabA-like domain HQ612_RS04135 PF00005 ABC transporter HQ612_RS04150 PF01571 Aminomethyltransferase folate-binding domain HQ612_RS04150 PF08669 Glycine cleavage T-protein C-terminal barrel domain HQ612_RS04155 PF00109 Beta-ketoacyl synthase, N-terminal domain HQ612_RS04155 PF02801 Beta-ketoacyl synthase, C-terminal domain HQ612_RS04175 PF16364 Cell surface antigen C-terminus HQ612_RS04175 PF00746 LPXTG cell wall anchor motif HQ612_RS04175 PF06696 Streptococcal surface antigen repeat HQ612_RS04175 PF17998 Cell surface antigen I/II C2 terminal domain HQ612_RS04175 PF18652 Adhesin P1 N-terminal domain HQ612_RS04175 PF08363 Glucan-binding protein C HQ612_RS04180 PF06280 Fn3-like domain HQ612_RS04180 PF00746 LPXTG cell wall anchor motif HQ612_RS04180 PF00082 Subtilase family HQ612_RS04180 PF02225 PA domain HQ612_RS04235 PF00005 ABC transporter HQ612_RS04245 PF01223 DNA/RNA non-specific endonuclease HQ612_RS04250 PF09335 SNARE associated Golgi protein HQ612_RS04255 PF00005 ABC transporter HQ612_RS04260 PF03649 Uncharacterised protein family (UPF0014) HQ612_RS04270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HQ612_RS04270 PF03466 LysR substrate binding domain HQ612_RS04280 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HQ612_RS04280 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HQ612_RS04290 PF00294 pfkB family carbohydrate kinase HQ612_RS04295 PF02836 Glycosyl hydrolases family 2, TIM barrel domain HQ612_RS04295 PF02837 Glycosyl hydrolases family 2, sugar binding domain HQ612_RS04295 PF00703 Glycosyl hydrolases family 2 HQ612_RS04300 PF07729 FCD domain HQ612_RS04300 PF00392 Bacterial regulatory proteins, gntR family HQ612_RS04305 PF01081 KDPG and KHG aldolase HQ612_RS04310 PF02614 Glucuronate isomerase HQ612_RS04315 PF03786 D-mannonate dehydratase (UxuA) HQ612_RS04320 PF00106 short chain dehydrogenase HQ612_RS04330 PF00933 Glycosyl hydrolase family 3 N terminal domain HQ612_RS04335 PF01321 Creatinase/Prolidase N-terminal domain HQ612_RS04335 PF00557 Metallopeptidase family M24 HQ612_RS04340 PF00356 Bacterial regulatory proteins, lacI family HQ612_RS04345 PF00128 Alpha amylase, catalytic domain HQ612_RS04345 PF09154 Domain of unknown function (DUF1939) HQ612_RS04350 PF13439 Glycosyltransferase Family 4 HQ612_RS04350 PF00534 Glycosyl transferases group 1 HQ612_RS04355 PF13439 Glycosyltransferase Family 4 HQ612_RS04355 PF00534 Glycosyl transferases group 1 HQ612_RS04360 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HQ612_RS04360 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HQ612_RS04360 PF03129 Anticodon binding domain HQ612_RS04360 PF02824 TGS domain HQ612_RS04365 PF00072 Response regulator receiver domain HQ612_RS04365 PF00486 Transcriptional regulatory protein, C terminal HQ612_RS04375 PF03413 Peptidase propeptide and YPEB domain HQ612_RS04380 PF00528 Binding-protein-dependent transport system inner membrane component HQ612_RS04385 PF00528 Binding-protein-dependent transport system inner membrane component HQ612_RS04390 PF00497 Bacterial extracellular solute-binding proteins, family 3 HQ612_RS04395 PF00005 ABC transporter HQ612_RS04400 PF00072 Response regulator receiver domain HQ612_RS04400 PF00486 Transcriptional regulatory protein, C terminal HQ612_RS04405 PF00672 HAMP domain HQ612_RS04405 PF13426 PAS domain HQ612_RS04405 PF00512 His Kinase A (phospho-acceptor) domain HQ612_RS04405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQ612_RS04410 PF00753 Metallo-beta-lactamase superfamily HQ612_RS04415 PF04304 Protein of unknown function (DUF454) HQ612_RS04420 PF00035 Double-stranded RNA binding motif HQ612_RS04420 PF14622 Ribonuclease-III-like HQ612_RS04425 PF06470 SMC proteins Flexible Hinge Domain HQ612_RS04425 PF02463 RecF/RecN/SMC N terminal domain HQ612_RS04440 PF00448 SRP54-type protein, GTPase domain HQ612_RS04440 PF02881 SRP54-type protein, helical bundle domain HQ612_RS04445 PF09323 Domain of unknown function (DUF1980) HQ612_RS04450 PF03773 Predicted permease HQ612_RS04465 PF17674 HHH domain HQ612_RS04465 PF00575 S1 RNA binding domain HQ612_RS04465 PF09371 Tex-like protein N-terminal domain HQ612_RS04465 PF16921 Tex protein YqgF-like domain HQ612_RS04470 PF10263 SprT-like family HQ612_RS04475 PF04024 PspC domain HQ612_RS04480 PF02603 HPr Serine kinase N terminus HQ612_RS04480 PF07475 HPr Serine kinase C-terminal domain HQ612_RS04485 PF01790 Prolipoprotein diacylglyceryl transferase HQ612_RS04495 PF12732 YtxH-like protein HQ612_RS04510 PF01136 Peptidase family U32 HQ612_RS04510 PF16325 Peptidase family U32 C-terminal domain HQ612_RS04515 PF02229 Transcriptional Coactivator p15 (PC4) HQ612_RS04525 PF01566 Natural resistance-associated macrophage protein HQ612_RS04530 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region HQ612_RS04530 PF01872 RibD C-terminal domain HQ612_RS04535 PF00677 Lumazine binding domain HQ612_RS04540 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase HQ612_RS04540 PF00925 GTP cyclohydrolase II HQ612_RS04545 PF00885 6,7-dimethyl-8-ribityllumazine synthase HQ612_RS04550 PF01336 OB-fold nucleic acid binding domain HQ612_RS04550 PF00152 tRNA synthetases class II (D, K and N) HQ612_RS04565 PF04073 Aminoacyl-tRNA editing domain HQ612_RS04570 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family HQ612_RS04590 PF01432 Peptidase family M3 HQ612_RS04590 PF08439 Oligopeptidase F HQ612_RS04595 PF00311 Phosphoenolpyruvate carboxylase HQ612_RS04600 PF01098 Cell cycle protein HQ612_RS04605 PF00009 Elongation factor Tu GTP binding domain HQ612_RS04605 PF03144 Elongation factor Tu domain 2 HQ612_RS04605 PF03143 Elongation factor Tu C-terminal domain HQ612_RS04610 PF00121 Triosephosphate isomerase HQ612_RS04615 PF00300 Histidine phosphatase superfamily (branch 1) HQ612_RS04620 PF00905 Penicillin binding protein transpeptidase domain HQ612_RS04620 PF03717 Penicillin-binding Protein dimerisation domain HQ612_RS04625 PF02132 RecR protein HQ612_RS04625 PF13662 Toprim domain HQ612_RS04630 PF07478 D-ala D-ala ligase C-terminus HQ612_RS04630 PF01820 D-ala D-ala ligase N-terminus HQ612_RS04635 PF01225 Mur ligase family, catalytic domain HQ612_RS04635 PF02875 Mur ligase family, glutamate ligase domain HQ612_RS04635 PF08245 Mur ligase middle domain HQ612_RS04640 PF07690 Major Facilitator Superfamily HQ612_RS04655 PF00009 Elongation factor Tu GTP binding domain HQ612_RS04655 PF03144 Elongation factor Tu domain 2 HQ612_RS04655 PF16658 Class II release factor RF3, C-terminal domain HQ612_RS04660 PF08000 Bacterial PH domain HQ612_RS04665 PF00005 ABC transporter HQ612_RS04665 PF09383 NIL domain HQ612_RS04670 PF00528 Binding-protein-dependent transport system inner membrane component HQ612_RS04675 PF03180 NLPA lipoprotein HQ612_RS04680 PF00270 DEAD/DEAH box helicase HQ612_RS04680 PF00271 Helicase conserved C-terminal domain HQ612_RS04685 PF01541 GIY-YIG catalytic domain HQ612_RS04690 PF05175 Methyltransferase small domain HQ612_RS04695 PF01553 Acyltransferase HQ612_RS04700 PF10531 SLBB domain HQ612_RS04705 PF03772 Competence protein HQ612_RS04705 PF13567 Domain of unknown function (DUF4131) HQ612_RS04705 PF00753 Metallo-beta-lactamase superfamily HQ612_RS04715 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family HQ612_RS04715 PF00356 Bacterial regulatory proteins, lacI family HQ612_RS04720 PF00934 PE family HQ612_RS04720 PF07859 alpha/beta hydrolase fold HQ612_RS04725 PF01209 ubiE/COQ5 methyltransferase family HQ612_RS04735 PF02777 Iron/manganese superoxide dismutases, C-terminal domain HQ612_RS04735 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain HQ612_RS04740 PF03123 CAT RNA binding domain HQ612_RS04740 PF00874 PRD domain HQ612_RS04745 PF00367 phosphotransferase system, EIIB HQ612_RS04745 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 HQ612_RS04745 PF02378 Phosphotransferase system, EIIC HQ612_RS04750 PF00232 Glycosyl hydrolase family 1 HQ612_RS04755 PF05651 Putative sugar diacid recognition HQ612_RS04755 PF17853 GGDEF-like domain HQ612_RS04755 PF13556 PucR C-terminal helix-turn-helix domain HQ612_RS04760 PF02595 Glycerate kinase family HQ612_RS04765 PF02447 GntP family permease HQ612_RS04775 PF01047 MarR family HQ612_RS04780 PF02547 Queuosine biosynthesis protein HQ612_RS04790 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase HQ612_RS04795 PF13409 Glutathione S-transferase, N-terminal domain HQ612_RS04800 PF00849 RNA pseudouridylate synthase HQ612_RS04800 PF01479 S4 domain HQ612_RS04815 PF08439 Oligopeptidase F HQ612_RS04815 PF01432 Peptidase family M3 HQ612_RS04825 PF01596 O-methyltransferase HQ612_RS04830 PF13145 PPIC-type PPIASE domain HQ612_RS04835 PF04525 LURP-one-related HQ612_RS04840 PF02272 DHHA1 domain HQ612_RS04840 PF01411 tRNA synthetases class II (A) HQ612_RS04840 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HQ612_RS04845 PF04474 Protein of unknown function (DUF554) HQ612_RS04850 PF08437 Glycosyl transferase family 8 C-terminal HQ612_RS04850 PF01501 Glycosyl transferase family 8 HQ612_RS04865 PF01381 Helix-turn-helix HQ612_RS04875 PF09515 Thiamine transporter protein (Thia_YuaJ) HQ612_RS04880 PF00268 Ribonucleotide reductase, small chain HQ612_RS04885 PF02867 Ribonucleotide reductase, barrel domain HQ612_RS04885 PF00317 Ribonucleotide reductase, all-alpha domain HQ612_RS04885 PF08343 Ribonucleotide reductase N-terminal HQ612_RS04890 PF00462 Glutaredoxin HQ612_RS04895 PF00381 PTS HPr component phosphorylation site HQ612_RS04900 PF02896 PEP-utilising enzyme, TIM barrel domain HQ612_RS04900 PF05524 PEP-utilising enzyme, N-terminal HQ612_RS04900 PF00391 PEP-utilising enzyme, mobile domain HQ612_RS04905 PF00171 Aldehyde dehydrogenase family HQ612_RS04910 PF01522 Polysaccharide deacetylase HQ612_RS04910 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain HQ612_RS04915 PF00270 DEAD/DEAH box helicase HQ612_RS04915 PF00271 Helicase conserved C-terminal domain HQ612_RS04920 PF00485 Phosphoribulokinase / Uridine kinase family HQ612_RS04925 PF13185 GAF domain HQ612_RS04930 PF12169 DNA polymerase III subunits gamma and tau domain III HQ612_RS04940 PF02237 Biotin protein ligase C terminal domain HQ612_RS04940 PF03099 Biotin/lipoate A/B protein ligase family HQ612_RS04940 PF08279 HTH domain HQ612_RS04945 PF02773 S-adenosylmethionine synthetase, C-terminal domain HQ612_RS04945 PF02772 S-adenosylmethionine synthetase, central domain HQ612_RS04945 PF00438 S-adenosylmethionine synthetase, N-terminal domain HQ612_RS04955 PF08764 Staphylococcus aureus coagulase HQ612_RS04955 PF04022 Staphylocoagulase repeat HQ612_RS04970 PF09819 ABC-type cobalt transport system, permease component HQ612_RS04975 PF00005 ABC transporter HQ612_RS04985 PF03070 TENA/THI-4/PQQC family HQ612_RS04990 PF08543 Phosphomethylpyrimidine kinase HQ612_RS04995 PF02110 Hydroxyethylthiazole kinase family HQ612_RS05000 PF02581 Thiamine monophosphate synthase HQ612_RS05005 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) HQ612_RS05015 PF03061 Thioesterase superfamily HQ612_RS05015 PF00571 CBS domain HQ612_RS05015 PF07085 DRTGG domain HQ612_RS05015 PF00392 Bacterial regulatory proteins, gntR family HQ612_RS05020 PF00557 Metallopeptidase family M24 HQ612_RS05030 PF04138 GtrA-like protein HQ612_RS05035 PF06177 QueT transporter HQ612_RS05040 PF00533 BRCA1 C Terminus (BRCT) domain HQ612_RS05040 PF01653 NAD-dependent DNA ligase adenylation domain HQ612_RS05040 PF03120 NAD-dependent DNA ligase OB-fold domain HQ612_RS05040 PF12826 Helix-hairpin-helix motif HQ612_RS05040 PF03119 NAD-dependent DNA ligase C4 zinc finger domain HQ612_RS05045 PF00781 Diacylglycerol kinase catalytic domain HQ612_RS05050 PF17999 Pullulanase N1-terminal domain HQ612_RS05050 PF00128 Alpha amylase, catalytic domain HQ612_RS05050 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) HQ612_RS05055 PF00128 Alpha amylase, catalytic domain HQ612_RS05055 PF02806 Alpha amylase, C-terminal all-beta domain HQ612_RS05055 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) HQ612_RS05060 PF00132 Bacterial transferase hexapeptide (six repeats) HQ612_RS05060 PF00483 Nucleotidyl transferase HQ612_RS05065 PF00483 Nucleotidyl transferase HQ612_RS05070 PF08323 Starch synthase catalytic domain HQ612_RS05070 PF00534 Glycosyl transferases group 1 HQ612_RS05075 PF00137 ATP synthase subunit C HQ612_RS05080 PF00119 ATP synthase A chain HQ612_RS05085 PF00430 ATP synthase B/B' CF(0) HQ612_RS05090 PF00213 ATP synthase delta (OSCP) subunit HQ612_RS05095 PF00306 ATP synthase alpha/beta chain, C terminal domain HQ612_RS05095 PF02874 ATP synthase alpha/beta family, beta-barrel domain HQ612_RS05095 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HQ612_RS05100 PF00231 ATP synthase HQ612_RS05105 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HQ612_RS05105 PF02874 ATP synthase alpha/beta family, beta-barrel domain HQ612_RS05110 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain HQ612_RS05110 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain HQ612_RS05120 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) HQ612_RS05130 PF01223 DNA/RNA non-specific endonuclease HQ612_RS05135 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain HQ612_RS05135 PF01409 tRNA synthetases class II core domain (F) HQ612_RS05140 PF13673 Acetyltransferase (GNAT) domain HQ612_RS05145 PF03483 B3/4 domain HQ612_RS05145 PF03484 tRNA synthetase B5 domain HQ612_RS05145 PF01588 Putative tRNA binding domain HQ612_RS05145 PF03147 Ferredoxin-fold anticodon binding domain HQ612_RS05145 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain HQ612_RS05150 PF04228 Putative neutral zinc metallopeptidase HQ612_RS05155 PF12705 PD-(D/E)XK nuclease superfamily HQ612_RS05160 PF00580 UvrD/REP helicase N-terminal domain HQ612_RS05160 PF13361 UvrD-like helicase C-terminal domain HQ612_RS05160 PF12705 PD-(D/E)XK nuclease superfamily HQ612_RS05170 PF01926 50S ribosome-binding GTPase HQ612_RS05170 PF12631 MnmE helical domain HQ612_RS05170 PF10396 GTP-binding protein TrmE N-terminus HQ612_RS05175 PF16326 ABC transporter C-terminal domain HQ612_RS05175 PF12848 ABC transporter HQ612_RS05175 PF00005 ABC transporter HQ612_RS05180 PF00676 Dehydrogenase E1 component HQ612_RS05185 PF00364 Biotin-requiring enzyme HQ612_RS05185 PF02779 Transketolase, pyrimidine binding domain HQ612_RS05185 PF02780 Transketolase, C-terminal domain HQ612_RS05190 PF00364 Biotin-requiring enzyme HQ612_RS05190 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) HQ612_RS05190 PF02817 e3 binding domain HQ612_RS05195 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HQ612_RS05195 PF07992 Pyridine nucleotide-disulphide oxidoreductase HQ612_RS05200 PF10437 Bacterial lipoate protein ligase C-terminus HQ612_RS05200 PF03099 Biotin/lipoate A/B protein ligase family HQ612_RS05205 PF07685 CobB/CobQ-like glutamine amidotransferase domain HQ612_RS05210 PF08245 Mur ligase middle domain HQ612_RS05210 PF08353 Domain of unknown function (DUF1727) HQ612_RS05215 PF02457 DisA bacterial checkpoint controller nucleotide-binding HQ612_RS05225 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HQ612_RS05225 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HQ612_RS05225 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HQ612_RS05225 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HQ612_RS05240 PF04055 Radical SAM superfamily HQ612_RS05240 PF06969 HemN C-terminal domain HQ612_RS05250 PF13344 Haloacid dehalogenase-like hydrolase HQ612_RS05260 PF16593 Bridge helix of CRISPR-associated endonuclease Cas9 HQ612_RS05260 PF16595 PAM-interacting domain of CRISPR-associated endonuclease Cas9 HQ612_RS05260 PF16592 REC lobe of CRISPR-associated endonuclease Cas9 HQ612_RS05260 PF13395 HNH endonuclease HQ612_RS05265 PF01867 CRISPR associated protein Cas1 HQ612_RS05270 PF09827 CRISPR associated protein Cas2 HQ612_RS05275 PF09711 CRISPR-associated protein (Cas_Csn2) HQ612_RS05280 PF00334 Nucleoside diphosphate kinase HQ612_RS05285 PF00009 Elongation factor Tu GTP binding domain HQ612_RS05285 PF03144 Elongation factor Tu domain 2 HQ612_RS05285 PF06421 GTP-binding protein LepA C-terminus HQ612_RS05285 PF00679 Elongation factor G C-terminus HQ612_RS05295 PF01966 HD domain HQ612_RS05300 PF13673 Acetyltransferase (GNAT) domain HQ612_RS05305 PF01641 SelR domain HQ612_RS05320 PF00132 Bacterial transferase hexapeptide (six repeats) HQ612_RS05340 PF00005 ABC transporter HQ612_RS05345 PF00392 Bacterial regulatory proteins, gntR family HQ612_RS05350 PF01336 OB-fold nucleic acid binding domain HQ612_RS05350 PF02811 PHP domain HQ612_RS05350 PF14579 Helix-hairpin-helix motif HQ612_RS05350 PF17657 Bacterial DNA polymerase III alpha subunit finger domain HQ612_RS05350 PF07733 Bacterial DNA polymerase III alpha NTPase domain HQ612_RS05355 PF00365 Phosphofructokinase HQ612_RS05360 PF02887 Pyruvate kinase, alpha/beta domain HQ612_RS05360 PF00224 Pyruvate kinase, barrel domain HQ612_RS05365 PF10502 Signal peptidase, peptidase S26 HQ612_RS05370 PF01380 SIS domain HQ612_RS05375 PF08274 PhnA Zinc-Ribbon HQ612_RS05375 PF03831 PhnA domain HQ612_RS05380 PF00528 Binding-protein-dependent transport system inner membrane component HQ612_RS05385 PF00005 ABC transporter HQ612_RS05395 PF01649 Ribosomal protein S20 HQ612_RS05400 PF00485 Phosphoribulokinase / Uridine kinase family HQ612_RS05405 PF05175 Methyltransferase small domain HQ612_RS05410 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region HQ612_RS05415 PF02608 ABC transporter substrate-binding protein PnrA-like HQ612_RS05420 PF00005 ABC transporter HQ612_RS05425 PF02653 Branched-chain amino acid transport system / permease component HQ612_RS05430 PF02653 Branched-chain amino acid transport system / permease component HQ612_RS05435 PF07992 Pyridine nucleotide-disulphide oxidoreductase HQ612_RS05435 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HQ612_RS05440 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain HQ612_RS05440 PF00056 lactate/malate dehydrogenase, NAD binding domain HQ612_RS05445 PF03989 DNA gyrase C-terminal domain, beta-propeller HQ612_RS05445 PF00521 DNA gyrase/topoisomerase IV, subunit A HQ612_RS05450 PF04203 Sortase domain HQ612_RS05455 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HQ612_RS05465 PF00999 Sodium/hydrogen exchanger family HQ612_RS05530 PF00117 Glutamine amidotransferase class-I HQ612_RS05530 PF00958 GMP synthase C terminal domain HQ612_RS05530 PF02540 NAD synthase HQ612_RS05535 PF00392 Bacterial regulatory proteins, gntR family HQ612_RS05535 PF07702 UTRA domain HQ612_RS05540 PF01134 Glucose inhibited division protein A HQ612_RS05550 PF03180 NLPA lipoprotein HQ612_RS05565 PF00005 ABC transporter HQ612_RS05575 PF00072 Response regulator receiver domain HQ612_RS05575 PF00486 Transcriptional regulatory protein, C terminal HQ612_RS05580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQ612_RS05585 PF00589 Phage integrase family HQ612_RS05585 PF13495 Phage integrase, N-terminal SAM-like domain HQ612_RS05590 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HQ612_RS05605 PF00448 SRP54-type protein, GTPase domain HQ612_RS05605 PF02881 SRP54-type protein, helical bundle domain HQ612_RS05605 PF02978 Signal peptide binding domain HQ612_RS05610 PF04297 Putative helix-turn-helix protein, YlxM / p13 like HQ612_RS05615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQ612_RS05615 PF00512 His Kinase A (phospho-acceptor) domain HQ612_RS05620 PF00072 Response regulator receiver domain HQ612_RS05620 PF00486 Transcriptional regulatory protein, C terminal HQ612_RS05625 PF11838 ERAP1-like C-terminal domain HQ612_RS05625 PF01433 Peptidase family M1 domain HQ612_RS05630 PF01895 PhoU domain HQ612_RS05635 PF00005 ABC transporter HQ612_RS05640 PF00005 ABC transporter HQ612_RS05645 PF00528 Binding-protein-dependent transport system inner membrane component HQ612_RS05650 PF00528 Binding-protein-dependent transport system inner membrane component HQ612_RS05655 PF12849 PBP superfamily domain HQ612_RS05660 PF01189 16S rRNA methyltransferase RsmB/F HQ612_RS05660 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF HQ612_RS05660 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF HQ612_RS05665 PF00459 Inositol monophosphatase family HQ612_RS05670 PF05256 Uncharacterised protein family (UPF0223) HQ612_RS05675 PF03960 ArsC family HQ612_RS05680 PF06574 FAD synthetase HQ612_RS05680 PF01687 Riboflavin kinase HQ612_RS05685 PF16198 tRNA pseudouridylate synthase B C-terminal domain HQ612_RS05685 PF01509 TruB family pseudouridylate synthase (N terminal domain) HQ612_RS05715 PF00005 ABC transporter HQ612_RS05720 PF01751 Toprim domain HQ612_RS05720 PF01131 DNA topoisomerase HQ612_RS05720 PF01396 Topoisomerase DNA binding C4 zinc finger HQ612_RS05725 PF02481 DNA recombination-mediator protein A HQ612_RS05725 PF18255 DNA processing protein A sterile alpha motif domain HQ612_RS05730 PF01497 Periplasmic binding protein HQ612_RS05735 PF00005 ABC transporter HQ612_RS05740 PF01032 FecCD transport family HQ612_RS05745 PF01032 FecCD transport family HQ612_RS05750 PF14602 Hexapeptide repeat of succinyl-transferase HQ612_RS05750 PF12464 Maltose acetyltransferase HQ612_RS05755 PF01351 Ribonuclease HII HQ612_RS05760 PF01926 50S ribosome-binding GTPase HQ612_RS05765 PF03734 L,D-transpeptidase catalytic domain HQ612_RS05770 PF02554 Carbon starvation protein CstA HQ612_RS05775 PF00072 Response regulator receiver domain HQ612_RS05775 PF04397 LytTr DNA-binding domain HQ612_RS05780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQ612_RS05780 PF13492 GAF domain HQ612_RS05780 PF07694 5TMR of 5TMR-LYT HQ612_RS05780 PF06580 Histidine kinase HQ612_RS05805 PF05257 CHAP domain HQ612_RS05805 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase HQ612_RS05875 PF01580 FtsK/SpoIIIE family HQ612_RS05875 PF12538 DNA transporter HQ612_RS05880 PF10140 WXG100 protein secretion system (Wss), protein YukC HQ612_RS05900 PF06013 Proteins of 100 residues with WXG HQ612_RS05905 PF06013 Proteins of 100 residues with WXG HQ612_RS05920 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HQ612_RS05920 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain HQ612_RS05920 PF02142 MGS-like domain HQ612_RS05925 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain HQ612_RS05925 PF00117 Glutamine amidotransferase class-I HQ612_RS05930 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain HQ612_RS05930 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain HQ612_RS05935 PF01979 Amidohydrolase family HQ612_RS05940 PF00156 Phosphoribosyl transferase domain HQ612_RS05945 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family HQ612_RS05955 PF00005 ABC transporter HQ612_RS05955 PF12848 ABC transporter HQ612_RS05965 PF01118 Semialdehyde dehydrogenase, NAD binding domain HQ612_RS05965 PF02774 Semialdehyde dehydrogenase, dimerisation domain HQ612_RS05975 PF13091 PLD-like domain HQ612_RS05980 PF01268 Formate--tetrahydrofolate ligase HQ612_RS05985 PF10437 Bacterial lipoate protein ligase C-terminus HQ612_RS05985 PF03099 Biotin/lipoate A/B protein ligase family HQ612_RS05995 PF01661 Macro domain HQ612_RS06000 PF01597 Glycine cleavage H-protein HQ612_RS06010 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HQ612_RS06015 PF03099 Biotin/lipoate A/B protein ligase family HQ612_RS06025 PF02441 Flavoprotein HQ612_RS06030 PF12822 ECF transporter, substrate-specific component HQ612_RS06035 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HQ612_RS06035 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HQ612_RS06035 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HQ612_RS06035 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HQ612_RS06045 PF00005 ABC transporter HQ612_RS06045 PF00664 ABC transporter transmembrane region HQ612_RS06050 PF00005 ABC transporter HQ612_RS06050 PF00664 ABC transporter transmembrane region HQ612_RS06065 PF00464 Serine hydroxymethyltransferase HQ612_RS06075 PF05175 Methyltransferase small domain HQ612_RS06080 PF00472 RF-1 domain HQ612_RS06080 PF03462 PCRF domain HQ612_RS06085 PF00265 Thymidine kinase HQ612_RS06090 PF01361 Tautomerase enzyme HQ612_RS06095 PF02424 ApbE family HQ612_RS06100 PF03358 NADPH-dependent FMN reductase HQ612_RS06100 PF04205 FMN-binding domain HQ612_RS06100 PF00890 FAD binding domain HQ612_RS06105 PF00890 FAD binding domain HQ612_RS06105 PF04205 FMN-binding domain HQ612_RS06105 PF03358 NADPH-dependent FMN reductase HQ612_RS06115 PF00860 Permease family HQ612_RS06120 PF00156 Phosphoribosyl transferase domain HQ612_RS06125 PF00478 IMP dehydrogenase / GMP reductase domain HQ612_RS06130 PF07690 Major Facilitator Superfamily HQ612_RS06140 PF02705 K+ potassium transporter HQ612_RS06145 PF00106 short chain dehydrogenase HQ612_RS06150 PF01515 Phosphate acetyl/butaryl transferase HQ612_RS06155 PF00849 RNA pseudouridylate synthase HQ612_RS06160 PF01513 ATP-NAD kinase HQ612_RS06165 PF04607 Region found in RelA / SpoT proteins HQ612_RS06175 PF14572 Phosphoribosyl synthetase-associated domain HQ612_RS06175 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase HQ612_RS06180 PF00266 Aminotransferase class-V HQ612_RS06190 PF02629 CoA binding domain HQ612_RS06190 PF06971 Putative DNA-binding protein N-terminus HQ612_RS06195 PF04002 RadC-like JAB domain HQ612_RS06200 PF01594 AI-2E family transporter HQ612_RS06205 PF00232 Glycosyl hydrolase family 1 HQ612_RS06220 PF12852 Cupin HQ612_RS06220 PF12833 Helix-turn-helix domain HQ612_RS06225 PF00654 Voltage gated chloride channel HQ612_RS06230 PF13416 Bacterial extracellular solute-binding protein HQ612_RS06235 PF00528 Binding-protein-dependent transport system inner membrane component HQ612_RS06240 PF00528 Binding-protein-dependent transport system inner membrane component HQ612_RS06245 PF00005 ABC transporter HQ612_RS06245 PF08402 TOBE domain HQ612_RS06250 PF01565 FAD binding domain HQ612_RS06250 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain HQ612_RS06255 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) HQ612_RS06260 PF02152 Dihydroneopterin aldolase HQ612_RS06265 PF00809 Pterin binding enzyme HQ612_RS06270 PF01227 GTP cyclohydrolase I HQ612_RS06275 PF02875 Mur ligase family, glutamate ligase domain HQ612_RS06275 PF08245 Mur ligase middle domain HQ612_RS06280 PF00892 EamA-like transporter family HQ612_RS06285 PF08544 GHMP kinases C terminal HQ612_RS06285 PF00288 GHMP kinases N terminal domain HQ612_RS06290 PF00742 Homoserine dehydrogenase HQ612_RS06290 PF03447 Homoserine dehydrogenase, NAD binding domain HQ612_RS06295 PF01522 Polysaccharide deacetylase HQ612_RS06300 PF02028 BCCT, betaine/carnitine/choline family transporter HQ612_RS06305 PF00171 Aldehyde dehydrogenase family HQ612_RS06310 PF03601 Conserved hypothetical protein 698 HQ612_RS06335 PF08534 Redoxin HQ612_RS06355 PF03780 Asp23 family, cell envelope-related function HQ612_RS06360 PF05532 CsbD-like HQ612_RS06365 PF03780 Asp23 family, cell envelope-related function HQ612_RS06380 PF04226 Transglycosylase associated protein HQ612_RS06390 PF00580 UvrD/REP helicase N-terminal domain HQ612_RS06390 PF13361 UvrD-like helicase C-terminal domain HQ612_RS06400 PF00860 Permease family HQ612_RS06405 PF01235 Sodium:alanine symporter family HQ612_RS06410 PF01545 Cation efflux family HQ612_RS06410 PF16916 Dimerisation domain of Zinc Transporter HQ612_RS06415 PF03788 LrgA family HQ612_RS06420 PF04172 LrgB-like family HQ612_RS06450 PF02899 Phage integrase, N-terminal SAM-like domain HQ612_RS06450 PF00589 Phage integrase family HQ612_RS06460 PF00575 S1 RNA binding domain HQ612_RS06480 PF01063 Amino-transferase class IV HQ612_RS06485 PF00521 DNA gyrase/topoisomerase IV, subunit A HQ612_RS06485 PF03989 DNA gyrase C-terminal domain, beta-propeller HQ612_RS06490 PF00204 DNA gyrase B HQ612_RS06490 PF00986 DNA gyrase B subunit, carboxyl terminus HQ612_RS06490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQ612_RS06490 PF01751 Toprim domain HQ612_RS06495 PF02660 Glycerol-3-phosphate acyltransferase HQ612_RS06500 PF03167 Uracil DNA glycosylase superfamily HQ612_RS06510 PF02348 Cytidylyltransferase HQ612_RS06510 PF13472 GDSL-like Lipase/Acylhydrolase family HQ612_RS06520 PF02350 UDP-N-acetylglucosamine 2-epimerase HQ612_RS06525 PF03102 NeuB family HQ612_RS06525 PF08666 SAF domain HQ612_RS06530 PF01943 Polysaccharide biosynthesis protein HQ612_RS06540 PF00535 Glycosyl transferase family 2 HQ612_RS06540 PF01501 Glycosyl transferase family 8 HQ612_RS06545 PF00535 Glycosyl transferase family 2 HQ612_RS06550 PF00535 Glycosyl transferase family 2 HQ612_RS06565 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase HQ612_RS06565 PF04101 Glycosyltransferase family 28 C-terminal domain HQ612_RS06570 PF04101 Glycosyltransferase family 28 C-terminal domain HQ612_RS06570 PF03033 Glycosyltransferase family 28 N-terminal domain HQ612_RS06575 PF02397 Bacterial sugar transferase HQ612_RS06580 PF13614 AAA domain HQ612_RS06585 PF02706 Chain length determinant protein HQ612_RS06595 PF03816 Cell envelope-related transcriptional attenuator domain HQ612_RS06600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HQ612_RS06600 PF03466 LysR substrate binding domain HQ612_RS06610 PF01048 Phosphorylase superfamily HQ612_RS06615 PF00654 Voltage gated chloride channel HQ612_RS06620 PF01048 Phosphorylase superfamily HQ612_RS06625 PF03960 ArsC family HQ612_RS06630 PF01676 Metalloenzyme superfamily HQ612_RS06635 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) HQ612_RS06650 PF00753 Metallo-beta-lactamase superfamily HQ612_RS06650 PF17770 Ribonuclease J C-terminal domain HQ612_RS06650 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain HQ612_RS06655 PF00005 ABC transporter HQ612_RS06655 PF08402 TOBE domain HQ612_RS06670 PF05670 NFACT protein RNA binding domain HQ612_RS06675 PF03306 Alpha-acetolactate decarboxylase HQ612_RS06680 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HQ612_RS06680 PF00205 Thiamine pyrophosphate enzyme, central domain HQ612_RS06680 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HQ612_RS06690 PF01594 AI-2E family transporter HQ612_RS06700 PF00293 NUDIX domain HQ612_RS06705 PF08124 Polysaccharide lyase family 8, N terminal alpha-helical domain HQ612_RS06705 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain HQ612_RS06705 PF02278 Polysaccharide lyase family 8, super-sandwich domain HQ612_RS06710 PF16363 GDP-mannose 4,6 dehydratase HQ612_RS06715 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase HQ612_RS06720 PF00483 Nucleotidyl transferase HQ612_RS06725 PF01266 FAD dependent oxidoreductase HQ612_RS06730 PF01784 NIF3 (NGG1p interacting factor 3) HQ612_RS06735 PF04816 tRNA (adenine(22)-N(1))-methyltransferase HQ612_RS06745 PF00156 Phosphoribosyl transferase domain HQ612_RS06750 PF02435 Levansucrase/Invertase HQ612_RS06755 PF10141 Single-strand DNA-specific exonuclease, C terminal domain HQ612_RS06755 PF17768 RecJ OB domain HQ612_RS06755 PF02272 DHHA1 domain HQ612_RS06755 PF01368 DHH family HQ612_RS06760 PF00106 short chain dehydrogenase HQ612_RS06765 PF12706 Beta-lactamase superfamily domain HQ612_RS06765 PF00753 Metallo-beta-lactamase superfamily HQ612_RS06775 PF16360 GTP-binding GTPase Middle Region HQ612_RS06775 PF13167 GTP-binding GTPase N-terminal HQ612_RS06775 PF01926 50S ribosome-binding GTPase HQ612_RS06795 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) HQ612_RS06795 PF11852 Domain of unknown function (DUF3372) HQ612_RS06795 PF03714 Bacterial pullanase-associated domain HQ612_RS06795 PF18494 Pullulanase Ins domain HQ612_RS06795 PF17967 Pullulanase N2 domain HQ612_RS06810 PF03167 Uracil DNA glycosylase superfamily HQ612_RS06815 PF01546 Peptidase family M20/M25/M40 HQ612_RS06820 PF00881 Nitroreductase family HQ612_RS06825 PF03009 Glycerophosphoryl diester phosphodiesterase family HQ612_RS06830 PF01541 GIY-YIG catalytic domain HQ612_RS06830 PF02151 UvrB/uvrC motif HQ612_RS06830 PF08459 UvrC Helix-hairpin-helix N-terminal HQ612_RS06835 PF02677 Epoxyqueuosine reductase QueH HQ612_RS06840 PF01554 MatE HQ612_RS06880 PF01297 Zinc-uptake complex component A periplasmic HQ612_RS06900 PF17657 Bacterial DNA polymerase III alpha subunit finger domain HQ612_RS06900 PF14579 Helix-hairpin-helix motif HQ612_RS06900 PF14480 DNA polymerase III polC-type N-terminus I HQ612_RS06900 PF02811 PHP domain HQ612_RS06900 PF00929 Exonuclease HQ612_RS06900 PF11490 DNA polymerase III polC-type N-terminus II HQ612_RS06900 PF07733 Bacterial DNA polymerase III alpha NTPase domain HQ612_RS06910 PF00589 Phage integrase family HQ612_RS06910 PF13495 Phage integrase, N-terminal SAM-like domain HQ612_RS06920 PF01719 Plasmid replication protein HQ612_RS06960 PF00542 Ribosomal protein L7/L12 C-terminal domain HQ612_RS06960 PF16320 Ribosomal protein L7/L12 dimerisation domain HQ612_RS06965 PF00466 Ribosomal protein L10 HQ612_RS06970 PF17871 AAA lid domain HQ612_RS06970 PF07724 AAA domain (Cdc48 subfamily) HQ612_RS06970 PF00004 ATPase family associated with various cellular activities (AAA) HQ612_RS06970 PF10431 C-terminal, D2-small domain, of ClpB protein HQ612_RS06975 PF02574 Homocysteine S-methyltransferase HQ612_RS06980 PF00324 Amino acid permease HQ612_RS07000 PF01926 50S ribosome-binding GTPase HQ612_RS07005 PF06689 ClpX C4-type zinc finger HQ612_RS07005 PF10431 C-terminal, D2-small domain, of ClpB protein HQ612_RS07005 PF07724 AAA domain (Cdc48 subfamily) HQ612_RS07010 PF00186 Dihydrofolate reductase HQ612_RS07015 PF00303 Thymidylate synthase HQ612_RS07020 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal HQ612_RS07020 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal HQ612_RS07025 PF00368 Hydroxymethylglutaryl-coenzyme A reductase HQ612_RS07035 PF03006 Haemolysin-III related HQ612_RS07040 PF00781 Diacylglycerol kinase catalytic domain HQ612_RS07055 PF01070 FMN-dependent dehydrogenase HQ612_RS07060 PF08544 GHMP kinases C terminal HQ612_RS07060 PF00288 GHMP kinases N terminal domain HQ612_RS07070 PF08544 GHMP kinases C terminal HQ612_RS07070 PF10509 Galactokinase galactose-binding signature HQ612_RS07070 PF00288 GHMP kinases N terminal domain HQ612_RS07075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQ612_RS07075 PF00512 His Kinase A (phospho-acceptor) domain HQ612_RS07080 PF00072 Response regulator receiver domain HQ612_RS07080 PF00486 Transcriptional regulatory protein, C terminal HQ612_RS07085 PF04607 Region found in RelA / SpoT proteins HQ612_RS07090 PF00664 ABC transporter transmembrane region HQ612_RS07090 PF00005 ABC transporter HQ612_RS07095 PF00664 ABC transporter transmembrane region HQ612_RS07095 PF00005 ABC transporter HQ612_RS07105 PF17936 Bacterial Ig domain HQ612_RS07105 PF00149 Calcineurin-like phosphoesterase HQ612_RS07105 PF02872 5'-nucleotidase, C-terminal domain HQ612_RS07110 PF01327 Polypeptide deformylase HQ612_RS07115 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain HQ612_RS07115 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase HQ612_RS07125 PF00664 ABC transporter transmembrane region HQ612_RS07125 PF00005 ABC transporter HQ612_RS07130 PF00005 ABC transporter HQ612_RS07130 PF00664 ABC transporter transmembrane region HQ612_RS07140 PF12848 ABC transporter HQ612_RS07140 PF16326 ABC transporter C-terminal domain HQ612_RS07140 PF00005 ABC transporter HQ612_RS07145 PF01743 Poly A polymerase head domain HQ612_RS07145 PF13735 tRNA nucleotidyltransferase domain 2 putative HQ612_RS07145 PF12627 Probable RNA and SrmB- binding site of polymerase A HQ612_RS07150 PF02645 Uncharacterised protein, DegV family COG1307 HQ612_RS07170 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HQ612_RS07170 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HQ612_RS07175 PF00294 pfkB family carbohydrate kinase HQ612_RS07180 PF08220 DeoR-like helix-turn-helix domain HQ612_RS07180 PF00455 DeoR C terminal sensor domain HQ612_RS07185 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase HQ612_RS07185 PF01476 LysM domain HQ612_RS07195 PF02558 Ketopantoate reductase PanE/ApbA HQ612_RS07195 PF08546 Ketopantoate reductase PanE/ApbA C terminal HQ612_RS07205 PF07992 Pyridine nucleotide-disulphide oxidoreductase HQ612_RS07210 PF01746 tRNA (Guanine-1)-methyltransferase HQ612_RS07215 PF05239 PRC-barrel domain HQ612_RS07215 PF01782 RimM N-terminal domain HQ612_RS07240 PF00886 Ribosomal protein S16 HQ612_RS07245 PF12704 MacB-like periplasmic core domain HQ612_RS07245 PF02687 FtsX-like permease family HQ612_RS07250 PF00005 ABC transporter HQ612_RS07255 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HQ612_RS07260 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain HQ612_RS07260 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HQ612_RS07260 PF02142 MGS-like domain HQ612_RS07265 PF00117 Glutamine amidotransferase class-I HQ612_RS07265 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain HQ612_RS07270 PF00156 Phosphoribosyl transferase domain HQ612_RS07275 PF00849 RNA pseudouridylate synthase HQ612_RS07275 PF01479 S4 domain HQ612_RS07280 PF01252 Signal peptidase (SPase) II HQ612_RS07285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HQ612_RS07285 PF03466 LysR substrate binding domain HQ612_RS07290 PF01016 Ribosomal L27 protein HQ612_RS07300 PF00829 Ribosomal prokaryotic L21 protein HQ612_RS07310 PF02568 Thiamine biosynthesis protein (ThiI) HQ612_RS07310 PF02926 THUMP domain HQ612_RS07315 PF00266 Aminotransferase class-V HQ612_RS07325 PF07992 Pyridine nucleotide-disulphide oxidoreductase HQ612_RS07325 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HQ612_RS07330 PF06133 Control of competence regulator ComK, YlbF/YmcA HQ612_RS07335 PF01264 Chorismate synthase HQ612_RS07340 PF01761 3-dehydroquinate synthase HQ612_RS07345 PF01487 Type I 3-dehydroquinase HQ612_RS07350 PF17785 PUA-like domain HQ612_RS07350 PF10672 S-adenosylmethionine-dependent methyltransferase HQ612_RS07355 PF00884 Sulfatase HQ612_RS07360 PF00453 Ribosomal protein L20 HQ612_RS07365 PF01632 Ribosomal protein L35 HQ612_RS07370 PF05198 Translation initiation factor IF-3, N-terminal domain HQ612_RS07370 PF00707 Translation initiation factor IF-3, C-terminal domain HQ612_RS07375 PF02224 Cytidylate kinase HQ612_RS07395 PF07687 Peptidase dimerisation domain HQ612_RS07395 PF01546 Peptidase family M20/M25/M40 HQ612_RS07400 PF01943 Polysaccharide biosynthesis protein HQ612_RS07400 PF14667 Polysaccharide biosynthesis C-terminal domain HQ612_RS07405 PF08245 Mur ligase middle domain HQ612_RS07405 PF02875 Mur ligase family, glutamate ligase domain HQ612_RS07410 PF00005 ABC transporter HQ612_RS07415 PF01497 Periplasmic binding protein HQ612_RS07420 PF01032 FecCD transport family HQ612_RS07425 PF01032 FecCD transport family HQ612_RS07435 PF01368 DHH family HQ612_RS07435 PF02833 DHHA2 domain HQ612_RS07440 PF04055 Radical SAM superfamily HQ612_RS07445 PF01595 Cyclin M transmembrane N-terminal domain HQ612_RS07445 PF00571 CBS domain HQ612_RS07445 PF03471 Transporter associated domain HQ612_RS07450 PF06962 Putative rRNA methylase HQ612_RS07455 PF04055 Radical SAM superfamily HQ612_RS07455 PF16199 Radical_SAM C-terminal domain HQ612_RS07460 PF01569 PAP2 superfamily HQ612_RS07465 PF12822 ECF transporter, substrate-specific component HQ612_RS07500 PF08323 Starch synthase catalytic domain HQ612_RS07500 PF00534 Glycosyl transferases group 1 HQ612_RS07505 PF00535 Glycosyl transferase family 2 HQ612_RS07510 PF14667 Polysaccharide biosynthesis C-terminal domain HQ612_RS07510 PF01943 Polysaccharide biosynthesis protein HQ612_RS07520 PF00535 Glycosyl transferase family 2 HQ612_RS07525 PF00535 Glycosyl transferase family 2 HQ612_RS07535 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase HQ612_RS07540 PF04991 LicD family HQ612_RS07555 PF00535 Glycosyl transferase family 2 HQ612_RS07560 PF00535 Glycosyl transferase family 2 HQ612_RS07570 PF04321 RmlD substrate binding domain HQ612_RS07575 PF01883 Iron-sulfur cluster assembly protein HQ612_RS07580 PF03979 Sigma-70 factor, region 1.1 HQ612_RS07580 PF00140 Sigma-70 factor, region 1.2 HQ612_RS07580 PF04542 Sigma-70 region 2 HQ612_RS07580 PF04539 Sigma-70 region 3 HQ612_RS07580 PF04545 Sigma-70, region 4 HQ612_RS07585 PF01807 CHC2 zinc finger HQ612_RS07585 PF10410 DnaB-helicase binding domain of primase HQ612_RS07585 PF08275 DNA primase catalytic core, N-terminal domain HQ612_RS07590 PF01741 Large-conductance mechanosensitive channel, MscL HQ612_RS07595 PF01165 Ribosomal protein S21 HQ612_RS07605 PF00497 Bacterial extracellular solute-binding proteins, family 3 HQ612_RS07610 PF00909 Ammonium Transporter Family HQ612_RS07620 PF00581 Rhodanese-like domain HQ612_RS07620 PF12368 Rhodanase C-terminal HQ612_RS07620 PF17773 UPF0176 acylphosphatase like domain HQ612_RS07630 PF07690 Major Facilitator Superfamily HQ612_RS07635 PF00343 Carbohydrate phosphorylase HQ612_RS07640 PF02446 4-alpha-glucanotransferase HQ612_RS07645 PF00356 Bacterial regulatory proteins, lacI family HQ612_RS07645 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family HQ612_RS07655 PF00528 Binding-protein-dependent transport system inner membrane component HQ612_RS07660 PF00528 Binding-protein-dependent transport system inner membrane component HQ612_RS07665 PF00854 POT family HQ612_RS07670 PF00293 NUDIX domain HQ612_RS07670 PF13344 Haloacid dehalogenase-like hydrolase HQ612_RS07685 PF00534 Glycosyl transferases group 1 HQ612_RS07690 PF07517 SecA DEAD-like domain HQ612_RS07690 PF01043 SecA preprotein cross-linking domain HQ612_RS07690 PF07516 SecA Wing and Scaffold domain HQ612_RS07700 PF16929 Accessory Sec system GspB-transporter HQ612_RS07705 PF16993 Accessory Sec system protein Asp1 HQ612_RS07710 PF00344 SecY translocase HQ612_RS07715 PF01501 Glycosyl transferase family 8 HQ612_RS07715 PF08759 Glycosyltransferase GT-D fold HQ612_RS07720 PF00535 Glycosyl transferase family 2 HQ612_RS07720 PF01501 Glycosyl transferase family 8 HQ612_RS07725 PF01501 Glycosyl transferase family 8 HQ612_RS07725 PF08759 Glycosyltransferase GT-D fold HQ612_RS07730 PF01501 Glycosyl transferase family 8 HQ612_RS07730 PF00535 Glycosyl transferase family 2 HQ612_RS07735 PF01501 Glycosyl transferase family 8 HQ612_RS07735 PF08759 Glycosyltransferase GT-D fold HQ612_RS07745 PF00746 LPXTG cell wall anchor motif HQ612_RS07745 PF04286 Protein of unknown function (DUF445) HQ612_RS07755 PF00271 Helicase conserved C-terminal domain HQ612_RS07755 PF04851 Type III restriction enzyme, res subunit HQ612_RS07755 PF02151 UvrB/uvrC motif HQ612_RS07755 PF12344 Ultra-violet resistance protein B HQ612_RS07755 PF17757 UvrB interaction domain HQ612_RS07765 PF00528 Binding-protein-dependent transport system inner membrane component HQ612_RS07770 PF00005 ABC transporter HQ612_RS07785 PF01018 GTP1/OBG HQ612_RS07785 PF09269 Domain of unknown function (DUF1967) HQ612_RS07785 PF01926 50S ribosome-binding GTPase HQ612_RS07795 PF02073 Thermophilic metalloprotease (M29) HQ612_RS07805 PF01425 Amidase HQ612_RS07810 PF00849 RNA pseudouridylate synthase HQ612_RS07810 PF01479 S4 domain HQ612_RS07815 PF00248 Aldo/keto reductase family HQ612_RS07820 PF00881 Nitroreductase family HQ612_RS07825 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HQ612_RS07830 PF00535 Glycosyl transferase family 2 HQ612_RS07835 PF00324 Amino acid permease HQ612_RS07840 PF01668 SmpB protein HQ612_RS07845 PF17876 Cold shock domain HQ612_RS07845 PF08206 Ribonuclease B OB domain HQ612_RS07845 PF00773 RNB domain HQ612_RS07845 PF00575 S1 RNA binding domain HQ612_RS07855 PF00471 Ribosomal protein L33 HQ612_RS07860 PF07690 Major Facilitator Superfamily HQ612_RS07860 PF00083 Sugar (and other) transporter HQ612_RS07870 PF13732 Domain of unknown function (DUF4162) HQ612_RS07870 PF00005 ABC transporter HQ612_RS07875 PF01121 Dephospho-CoA kinase HQ612_RS07880 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain HQ612_RS07880 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain HQ612_RS07880 PF06827 Zinc finger found in FPG and IleRS HQ612_RS07885 PF01381 Helix-turn-helix HQ612_RS07930 PF07650 KH domain HQ612_RS07930 PF01926 50S ribosome-binding GTPase HQ612_RS07935 PF01219 Prokaryotic diacylglycerol kinase HQ612_RS07940 PF02130 Uncharacterized protein family UPF0054 HQ612_RS07950 PF00293 NUDIX domain HQ612_RS07950 PF13344 Haloacid dehalogenase-like hydrolase HQ612_RS07960 PF02562 PhoH-like protein HQ612_RS07965 PF06100 MCRA family HQ612_RS07970 PF06855 YozE SAM-like fold HQ612_RS07975 PF01625 Peptide methionine sulfoxide reductase HQ612_RS07985 PF01765 Ribosome recycling factor HQ612_RS07990 PF00696 Amino acid kinase family HQ612_RS07995 PF00005 ABC transporter HQ612_RS08000 PF00005 ABC transporter HQ612_RS08000 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HQ612_RS08005 PF00528 Binding-protein-dependent transport system inner membrane component HQ612_RS08005 PF12911 N-terminal TM domain of oligopeptide transport permease C HQ612_RS08010 PF00528 Binding-protein-dependent transport system inner membrane component HQ612_RS08015 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HQ612_RS08020 PF00687 Ribosomal protein L1p/L10e family HQ612_RS08025 PF03946 Ribosomal protein L11, N-terminal domain HQ612_RS08025 PF00298 Ribosomal protein L11, RNA binding domain HQ612_RS08030 PF07690 Major Facilitator Superfamily HQ612_RS08035 PF01546 Peptidase family M20/M25/M40 HQ612_RS08035 PF07687 Peptidase dimerisation domain HQ612_RS08040 PF03466 LysR substrate binding domain HQ612_RS08040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HQ612_RS08050 PF00425 chorismate binding enzyme HQ612_RS08050 PF04715 Anthranilate synthase component I, N terminal region HQ612_RS08055 PF09397 Ftsk gamma domain HQ612_RS08055 PF01580 FtsK/SpoIIIE family HQ612_RS08055 PF17854 FtsK alpha domain HQ612_RS08060 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD HQ612_RS08065 PF00950 ABC 3 transport family HQ612_RS08070 PF00005 ABC transporter HQ612_RS08075 PF01297 Zinc-uptake complex component A periplasmic HQ612_RS08085 PF01048 Phosphorylase superfamily HQ612_RS08095 PF00293 NUDIX domain HQ612_RS08100 PF14602 Hexapeptide repeat of succinyl-transferase HQ612_RS08100 PF00132 Bacterial transferase hexapeptide (six repeats) HQ612_RS08100 PF12804 MobA-like NTP transferase domain HQ612_RS08115 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HQ612_RS08115 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HQ612_RS08150 PF00535 Glycosyl transferase family 2 HQ612_RS08175 PF05525 Branched-chain amino acid transport protein HQ612_RS08180 PF09334 tRNA synthetases class I (M) HQ612_RS08180 PF01588 Putative tRNA binding domain HQ612_RS08185 PF09313 Domain of unknown function (DUF1971) HQ612_RS08185 PF03848 Tellurite resistance protein TehB HQ612_RS08195 PF02378 Phosphotransferase system, EIIC HQ612_RS08205 PF03372 Endonuclease/Exonuclease/phosphatase family HQ612_RS08210 PF03960 ArsC family HQ612_RS08215 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain HQ612_RS08215 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain HQ612_RS08220 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HQ612_RS08220 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HQ612_RS08230 PF00266 Aminotransferase class-V HQ612_RS08235 PF03932 CutC family HQ612_RS08240 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HQ612_RS08245 PF06156 Initiation control protein YabA HQ612_RS08250 PF09115 DNA polymerase III, delta subunit, C terminal HQ612_RS08255 PF02223 Thymidylate kinase HQ612_RS08260 PF00571 CBS domain HQ612_RS08265 PF00005 ABC transporter HQ612_RS08270 PF00005 ABC transporter HQ612_RS08270 PF12399 Branched-chain amino acid ATP-binding cassette transporter HQ612_RS08275 PF02653 Branched-chain amino acid transport system / permease component HQ612_RS08275 PF11862 Domain of unknown function (DUF3382) HQ612_RS08280 PF02653 Branched-chain amino acid transport system / permease component HQ612_RS08285 PF13458 Periplasmic binding protein HQ612_RS08290 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) HQ612_RS08295 PF00574 Clp protease HQ612_RS08305 PF00155 Aminotransferase class I and II HQ612_RS08310 PF00588 SpoU rRNA Methylase family HQ612_RS08315 PF13520 Amino acid permease HQ612_RS08320 PF02080 TrkA-C domain HQ612_RS08320 PF02254 TrkA-N domain HQ612_RS08325 PF02386 Cation transport protein HQ612_RS08330 PF01809 Putative membrane protein insertion efficiency factor HQ612_RS08335 PF00849 RNA pseudouridylate synthase HQ612_RS08335 PF01479 S4 domain HQ612_RS08340 PF04079 Segregation and condensation complex subunit ScpB HQ612_RS08345 PF02616 Segregation and condensation protein ScpA HQ612_RS08350 PF00589 Phage integrase family HQ612_RS08365 PF01725 Ham1 family HQ612_RS08370 PF01177 Asp/Glu/Hydantoin racemase HQ612_RS08375 PF03672 Uncharacterised protein family (UPF0154) HQ612_RS08385 PF02829 3H domain HQ612_RS08385 PF08279 HTH domain HQ612_RS08390 PF01027 Inhibitor of apoptosis-promoting Bax1 HQ612_RS08400 PF08032 RNA 2'-O ribose methyltransferase substrate binding HQ612_RS08400 PF00588 SpoU rRNA Methylase family HQ612_RS08405 PF00708 Acylphosphatase HQ612_RS08410 PF02096 60Kd inner membrane protein HQ612_RS08415 PF00528 Binding-protein-dependent transport system inner membrane component HQ612_RS08420 PF00497 Bacterial extracellular solute-binding proteins, family 3 HQ612_RS08425 PF01425 Amidase HQ612_RS08430 PF01272 Transcription elongation factor, GreA/GreB, C-term HQ612_RS08430 PF03449 Transcription elongation factor, N-terminal HQ612_RS08435 PF02618 YceG-like family HQ612_RS08445 PF01225 Mur ligase family, catalytic domain HQ612_RS08445 PF02875 Mur ligase family, glutamate ligase domain HQ612_RS08445 PF08245 Mur ligase middle domain HQ612_RS08455 PF00271 Helicase conserved C-terminal domain HQ612_RS08455 PF00176 SNF2 family N-terminal domain HQ612_RS08455 PF04434 SWIM zinc finger HQ612_RS08460 PF01926 50S ribosome-binding GTPase HQ612_RS08460 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal HQ612_RS08465 PF01695 IstB-like ATP binding protein HQ612_RS08465 PF07319 Primosomal protein DnaI N-terminus HQ612_RS08475 PF03477 ATP cone domain HQ612_RS08480 PF00512 His Kinase A (phospho-acceptor) domain HQ612_RS08480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQ612_RS08480 PF18719 ArlS sensor domain HQ612_RS08485 PF00072 Response regulator receiver domain HQ612_RS08485 PF00486 Transcriptional regulatory protein, C terminal HQ612_RS08495 PF01435 Peptidase family M48 HQ612_RS08500 PF04011 LemA family HQ612_RS08505 PF02527 rRNA small subunit methyltransferase G HQ612_RS08510 PF02386 Cation transport protein HQ612_RS08515 PF02080 TrkA-C domain HQ612_RS08515 PF02254 TrkA-N domain HQ612_RS08525 PF00005 ABC transporter HQ612_RS08525 PF12558 ATP-binding cassette cobalt transporter HQ612_RS08530 PF07155 ECF-type riboflavin transporter, S component HQ612_RS08535 PF00375 Sodium:dicarboxylate symporter family HQ612_RS08540 PF05525 Branched-chain amino acid transport protein HQ612_RS08545 PF13823 Alcohol dehydrogenase GroES-associated HQ612_RS08545 PF08240 Alcohol dehydrogenase GroES-like domain HQ612_RS08545 PF00107 Zinc-binding dehydrogenase HQ612_RS08550 PF00528 Binding-protein-dependent transport system inner membrane component HQ612_RS08555 PF09383 NIL domain HQ612_RS08555 PF00005 ABC transporter HQ612_RS08560 PF07687 Peptidase dimerisation domain HQ612_RS08560 PF01546 Peptidase family M20/M25/M40 HQ612_RS08565 PF03180 NLPA lipoprotein HQ612_RS08570 PF00497 Bacterial extracellular solute-binding proteins, family 3 HQ612_RS08575 PF07722 Peptidase C26 HQ612_RS08580 PF01709 Transcriptional regulator HQ612_RS08585 PF02733 Dak1 domain HQ612_RS08590 PF14278 Transcriptional regulator C-terminal region HQ612_RS08590 PF00440 Bacterial regulatory proteins, tetR family HQ612_RS08595 PF02733 Dak1 domain HQ612_RS08600 PF02734 DAK2 domain HQ612_RS08605 PF03610 PTS system fructose IIA component HQ612_RS08610 PF00230 Major intrinsic protein HQ612_RS08620 PF07739 TipAS antibiotic-recognition domain HQ612_RS08620 PF13411 MerR HTH family regulatory protein HQ612_RS08625 PF05636 HIGH Nucleotidyl Transferase HQ612_RS08635 PF13649 Methyltransferase domain HQ612_RS08650 PF01966 HD domain HQ612_RS08655 PF01467 Cytidylyltransferase-like HQ612_RS08660 PF01985 CRS1 / YhbY (CRM) domain HQ612_RS08665 PF01926 50S ribosome-binding GTPase HQ612_RS08680 PF02934 GatB/GatE catalytic domain HQ612_RS08680 PF02637 GatB domain HQ612_RS08685 PF01425 Amidase HQ612_RS08690 PF02686 Glu-tRNAGln amidotransferase C subunit HQ612_RS08695 PF00391 PEP-utilising enzyme, mobile domain HQ612_RS08695 PF02896 PEP-utilising enzyme, TIM barrel domain HQ612_RS08695 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain HQ612_RS08700 PF03618 Kinase/pyrophosphorylase HQ612_RS08705 PF00571 CBS domain HQ612_RS08705 PF08279 HTH domain HQ612_RS08715 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain HQ612_RS08715 PF00378 Enoyl-CoA hydratase/isomerase HQ612_RS08715 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain HQ612_RS08720 PF00857 Isochorismatase family HQ612_RS08725 PF08222 CodY helix-turn-helix domain HQ612_RS08725 PF06018 CodY GAF-like domain HQ612_RS08730 PF00155 Aminotransferase class I and II HQ612_RS08735 PF00582 Universal stress protein family HQ612_RS08745 PF00710 Asparaginase, N-terminal HQ612_RS08745 PF17763 Glutaminase/Asparaginase C-terminal domain HQ612_RS08750 PF18317 Shikimate 5'-dehydrogenase C-terminal domain HQ612_RS08750 PF08501 Shikimate dehydrogenase substrate binding domain HQ612_RS08755 PF00248 Aldo/keto reductase family HQ612_RS08760 PF00271 Helicase conserved C-terminal domain HQ612_RS08760 PF17191 RecG wedge domain HQ612_RS08760 PF00270 DEAD/DEAH box helicase HQ612_RS08765 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase HQ612_RS08765 PF05257 CHAP domain HQ612_RS08770 PF01168 Alanine racemase, N-terminal domain HQ612_RS08770 PF00842 Alanine racemase, C-terminal domain HQ612_RS08775 PF01648 4'-phosphopantetheinyl transferase superfamily HQ612_RS08780 PF00793 DAHP synthetase I family HQ612_RS08785 PF07516 SecA Wing and Scaffold domain HQ612_RS08785 PF02810 SEC-C motif HQ612_RS08785 PF01043 SecA preprotein cross-linking domain HQ612_RS08785 PF07517 SecA DEAD-like domain HQ612_RS08790 PF01238 Phosphomannose isomerase type I HQ612_RS08795 PF00480 ROK family HQ612_RS08800 PF02378 Phosphotransferase system, EIIC HQ612_RS08800 PF00367 phosphotransferase system, EIIB HQ612_RS08800 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 HQ612_RS08805 PF00251 Glycosyl hydrolases family 32 N-terminal domain HQ612_RS08805 PF08244 Glycosyl hydrolases family 32 C terminal HQ612_RS08810 PF00356 Bacterial regulatory proteins, lacI family HQ612_RS08815 PF01029 NusB family HQ612_RS08820 PF03780 Asp23 family, cell envelope-related function HQ612_RS08825 PF09285 Elongation factor P, C-terminal HQ612_RS08825 PF01132 Elongation factor P (EF-P) OB domain HQ612_RS08825 PF08207 Elongation factor P (EF-P) KOW-like domain HQ612_RS08850 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region HQ612_RS08855 PF01321 Creatinase/Prolidase N-terminal domain HQ612_RS08855 PF00557 Metallopeptidase family M24 HQ612_RS08865 PF07690 Major Facilitator Superfamily HQ612_RS08870 PF00005 ABC transporter HQ612_RS08870 PF17760 UvrA interaction domain HQ612_RS08870 PF17755 UvrA DNA-binding domain HQ612_RS08885 PF01084 Ribosomal protein S18 HQ612_RS08890 PF00436 Single-strand binding protein family HQ612_RS08895 PF01250 Ribosomal protein S6 HQ612_RS08900 PF00730 HhH-GPD superfamily base excision DNA repair protein HQ612_RS08900 PF14815 NUDIX domain HQ612_RS08905 PF01381 Helix-turn-helix HQ612_RS08910 PF00085 Thioredoxin HQ612_RS08920 PF00488 MutS domain V HQ612_RS08920 PF01713 Smr domain HQ612_RS08935 PF11858 Domain of unknown function (DUF3378) HQ612_RS08935 PF01351 Ribonuclease HII HQ612_RS08940 PF10502 Signal peptidase, peptidase S26 HQ612_RS08945 PF14490 Helix-hairpin-helix containing domain HQ612_RS08945 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain HQ612_RS08945 PF13538 UvrD-like helicase C-terminal domain HQ612_RS08955 PF11799 impB/mucB/samB family C-terminal domain HQ612_RS08955 PF11798 IMS family HHH motif HQ612_RS08955 PF00817 impB/mucB/samB family HQ612_RS08960 PF01228 Glycine radical HQ612_RS08960 PF02901 Pyruvate formate lyase-like HQ612_RS08970 PF00144 Beta-lactamase HQ612_RS08985 PF00230 Major intrinsic protein HQ612_RS08995 PF07690 Major Facilitator Superfamily HQ612_RS09000 PF13545 Crp-like helix-turn-helix domain HQ612_RS09005 PF02129 X-Pro dipeptidyl-peptidase (S15 family) HQ612_RS09005 PF09168 X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal HQ612_RS09005 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain HQ612_RS09015 PF00348 Polyprenyl synthetase HQ612_RS09020 PF00664 ABC transporter transmembrane region HQ612_RS09020 PF00005 ABC transporter HQ612_RS09025 PF00664 ABC transporter transmembrane region HQ612_RS09025 PF00005 ABC transporter HQ612_RS09030 PF02322 Cytochrome bd terminal oxidase subunit II HQ612_RS09035 PF01654 Cytochrome bd terminal oxidase subunit I HQ612_RS09040 PF07992 Pyridine nucleotide-disulphide oxidoreductase HQ612_RS09060 PF12161 HsdM N-terminal domain HQ612_RS09060 PF02384 N-6 DNA Methylase HQ612_RS09070 PF02779 Transketolase, pyrimidine binding domain HQ612_RS09070 PF02780 Transketolase, C-terminal domain HQ612_RS09070 PF00456 Transketolase, thiamine diphosphate binding domain HQ612_RS09075 PF00923 Transaldolase/Fructose-6-phosphate aldolase HQ612_RS09080 PF00834 Ribulose-phosphate 3 epimerase family HQ612_RS09085 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HQ612_RS09090 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HQ612_RS09095 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HQ612_RS09100 PF08279 HTH domain HQ612_RS09100 PF05043 Mga helix-turn-helix domain HQ612_RS09100 PF00874 PRD domain HQ612_RS09100 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HQ612_RS09115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HQ612_RS09115 PF03466 LysR substrate binding domain HQ612_RS09120 PF00106 short chain dehydrogenase HQ612_RS09130 PF00248 Aldo/keto reductase family HQ612_RS09135 PF04229 GrpB protein HQ612_RS09140 PF02567 Phenazine biosynthesis-like protein HQ612_RS09150 PF02575 YbaB/EbfC DNA-binding family HQ612_RS09160 PF07739 TipAS antibiotic-recognition domain HQ612_RS09160 PF13411 MerR HTH family regulatory protein HQ612_RS09170 PF04394 Protein of unknown function, DUF536 HQ612_RS09170 PF08279 HTH domain HQ612_RS09185 PF00253 Ribosomal protein S14p/S29e HQ612_RS09195 PF00814 Glycoprotease family HQ612_RS09200 PF00583 Acetyltransferase (GNAT) family HQ612_RS09205 PF00814 Glycoprotease family HQ612_RS09210 PF07288 Protein of unknown function (DUF1447) HQ612_RS09215 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain HQ612_RS09215 PF17770 Ribonuclease J C-terminal domain HQ612_RS09215 PF00753 Metallo-beta-lactamase superfamily HQ612_RS09220 PF05257 CHAP domain HQ612_RS09220 PF01476 LysM domain HQ612_RS09225 PF00120 Glutamine synthetase, catalytic domain HQ612_RS09225 PF03951 Glutamine synthetase, beta-Grasp domain HQ612_RS09230 PF13411 MerR HTH family regulatory protein HQ612_RS09240 PF00162 Phosphoglycerate kinase HQ612_RS09245 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) HQ612_RS09250 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain HQ612_RS09250 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain HQ612_RS09255 PF00679 Elongation factor G C-terminus HQ612_RS09255 PF14492 Elongation Factor G, domain II HQ612_RS09255 PF03764 Elongation factor G, domain IV HQ612_RS09255 PF00009 Elongation factor Tu GTP binding domain HQ612_RS09255 PF03144 Elongation factor Tu domain 2 HQ612_RS09260 PF00177 Ribosomal protein S7p/S5e HQ612_RS09265 PF00164 Ribosomal protein S12/S23 HQ612_RS09270 PF09182 Bacterial purine repressor, N-terminal HQ612_RS09270 PF00156 Phosphoribosyl transferase domain HQ612_RS09275 PF01966 HD domain HQ612_RS09275 PF01336 OB-fold nucleic acid binding domain HQ612_RS09280 PF02646 RmuC family HQ612_RS09290 PF00834 Ribulose-phosphate 3 epimerase family HQ612_RS09295 PF16745 RsgA N-terminal domain HQ612_RS09295 PF03193 RsgA GTPase HQ612_RS09300 PF08241 Methyltransferase domain HQ612_RS09305 PF00398 Ribosomal RNA adenine dimethylase HQ612_RS09315 PF13331 Domain of unknown function (DUF4093) HQ612_RS09320 PF01026 TatD related DNase HQ612_RS09345 PF04914 DltD protein HQ612_RS09350 PF00550 Phosphopantetheine attachment site HQ612_RS09355 PF03062 MBOAT, membrane-bound O-acyltransferase family HQ612_RS09360 PF13193 AMP-binding enzyme C-terminal domain HQ612_RS09360 PF00501 AMP-binding enzyme HQ612_RS09370 PF00512 His Kinase A (phospho-acceptor) domain HQ612_RS09370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQ612_RS09375 PF00072 Response regulator receiver domain HQ612_RS09375 PF00486 Transcriptional regulatory protein, C terminal HQ612_RS09380 PF00468 Ribosomal protein L34 HQ612_RS09385 PF07670 Nucleoside recognition HQ612_RS09390 PF00528 Binding-protein-dependent transport system inner membrane component HQ612_RS09395 PF00571 CBS domain HQ612_RS09395 PF00005 ABC transporter HQ612_RS09400 PF09364 XFP N-terminal domain HQ612_RS09400 PF09363 XFP C-terminal domain HQ612_RS09400 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase HQ612_RS09420 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HQ612_RS09420 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HQ612_RS09430 PF03611 PTS system sugar-specific permease component HQ612_RS09435 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HQ612_RS09435 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HQ612_RS09445 PF00356 Bacterial regulatory proteins, lacI family HQ612_RS09450 PF00923 Transaldolase/Fructose-6-phosphate aldolase HQ612_RS09455 PF00596 Class II Aldolase and Adducin N-terminal domain HQ612_RS09460 PF01261 Xylose isomerase-like TIM barrel HQ612_RS09465 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family HQ612_RS09470 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HQ612_RS09475 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HQ612_RS09480 PF03611 PTS system sugar-specific permease component HQ612_RS09495 PF00709 Adenylosuccinate synthetase HQ612_RS09515 PF18419 ATP-grasp-like domain HQ612_RS09515 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain HQ612_RS09515 PF04262 Glutamate-cysteine ligase HQ612_RS09530 PF01430 Hsp33 protein HQ612_RS09535 PF01207 Dihydrouridine synthase (Dus) HQ612_RS09540 PF01712 Deoxynucleoside kinase HQ612_RS09550 PF10431 C-terminal, D2-small domain, of ClpB protein HQ612_RS09550 PF00004 ATPase family associated with various cellular activities (AAA) HQ612_RS09550 PF07724 AAA domain (Cdc48 subfamily) HQ612_RS09550 PF02861 Clp amino terminal domain, pathogenicity island component HQ612_RS09550 PF17871 AAA lid domain HQ612_RS09555 PF17727 CtsR C-terminal dimerization domain HQ612_RS09555 PF05848 CtsR N-terminal HTH domain HQ612_RS09565 PF00889 Elongation factor TS HQ612_RS09570 PF00318 Ribosomal protein S2 HQ612_RS09575 PF00578 AhpC/TSA family HQ612_RS09580 PF13192 Thioredoxin domain HQ612_RS09580 PF07992 Pyridine nucleotide-disulphide oxidoreductase HQ612_RS09590 PF00999 Sodium/hydrogen exchanger family HQ612_RS09600 PF02016 LD-carboxypeptidase N-terminal domain HQ612_RS09600 PF17676 LD-carboxypeptidase C-terminal domain HQ612_RS09605 PF05649 Peptidase family M13 HQ612_RS09605 PF01431 Peptidase family M13 HQ612_RS09625 PF01327 Polypeptide deformylase HQ612_RS09630 PF00356 Bacterial regulatory proteins, lacI family HQ612_RS09640 PF03613 PTS system mannose/fructose/sorbose family IID component HQ612_RS09645 PF03609 PTS system sorbose-specific iic component HQ612_RS09650 PF03830 PTS system sorbose subfamily IIB component HQ612_RS09655 PF07470 Glycosyl Hydrolase Family 88 HQ612_RS09660 PF03610 PTS system fructose IIA component HQ612_RS09660 PF03830 PTS system sorbose subfamily IIB component HQ612_RS09695 PF02811 PHP domain HQ612_RS09695 PF17657 Bacterial DNA polymerase III alpha subunit finger domain HQ612_RS09695 PF07733 Bacterial DNA polymerase III alpha NTPase domain HQ612_RS09695 PF11490 DNA polymerase III polC-type N-terminus II HQ612_RS09695 PF14480 DNA polymerase III polC-type N-terminus I HQ612_RS09695 PF00929 Exonuclease HQ612_RS09695 PF14579 Helix-hairpin-helix motif HQ612_RS09700 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase HQ612_RS09700 PF01476 LysM domain HQ612_RS09705 PF03129 Anticodon binding domain HQ612_RS09705 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HQ612_RS09705 PF04073 Aminoacyl-tRNA editing domain HQ612_RS09710 PF13180 PDZ domain HQ612_RS09710 PF02163 Peptidase family M50 HQ612_RS09720 PF01255 Putative undecaprenyl diphosphate synthase HQ612_RS09725 PF02699 Preprotein translocase subunit HQ612_RS09735 PF03949 Malic enzyme, NAD binding domain HQ612_RS09735 PF00390 Malic enzyme, N-terminal domain HQ612_RS09740 PF03390 2-hydroxycarboxylate transporter family HQ612_RS09745 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain HQ612_RS09745 PF17203 Single cache domain 3 HQ612_RS09745 PF00989 PAS fold HQ612_RS09745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQ612_RS09750 PF00072 Response regulator receiver domain HQ612_RS09755 PF16363 GDP-mannose 4,6 dehydratase HQ612_RS09760 PF00128 Alpha amylase, catalytic domain HQ612_RS09765 PF17912 MalK OB fold domain HQ612_RS09765 PF00005 ABC transporter HQ612_RS09765 PF03459 TOBE domain HQ612_RS09770 PF13556 PucR C-terminal helix-turn-helix domain HQ612_RS09775 PF01263 Aldose 1-epimerase HQ612_RS09780 PF01791 DeoC/LacD family aldolase HQ612_RS09785 PF00294 pfkB family carbohydrate kinase HQ612_RS09790 PF02502 Ribose/Galactose Isomerase HQ612_RS09795 PF02502 Ribose/Galactose Isomerase HQ612_RS09800 PF04650 YSIRK type signal peptide HQ612_RS09800 PF13088 BNR repeat-like domain HQ612_RS09800 PF02973 Sialidase, N-terminal domain HQ612_RS09820 PF08220 DeoR-like helix-turn-helix domain HQ612_RS09820 PF00455 DeoR C terminal sensor domain HQ612_RS09835 PF02580 D-Tyr-tRNA(Tyr) deacylase HQ612_RS09840 PF02824 TGS domain HQ612_RS09840 PF13291 ACT domain HQ612_RS09840 PF04607 Region found in RelA / SpoT proteins HQ612_RS09845 PF02872 5'-nucleotidase, C-terminal domain HQ612_RS09845 PF00149 Calcineurin-like phosphoesterase HQ612_RS09850 PF07972 NrdI Flavodoxin like HQ612_RS09855 PF05343 M42 glutamyl aminopeptidase HQ612_RS09870 PF00072 Response regulator receiver domain HQ612_RS09870 PF12833 Helix-turn-helix domain HQ612_RS09875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQ612_RS09875 PF06580 Histidine kinase HQ612_RS09880 PF03613 PTS system mannose/fructose/sorbose family IID component HQ612_RS09885 PF03609 PTS system sorbose-specific iic component HQ612_RS09890 PF03830 PTS system sorbose subfamily IIB component HQ612_RS09900 PF01757 Acyltransferase family HQ612_RS09900 PF00842 Alanine racemase, C-terminal domain HQ612_RS09900 PF01168 Alanine racemase, N-terminal domain HQ612_RS09925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQ612_RS09925 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain HQ612_RS09925 PF00989 PAS fold HQ612_RS09925 PF17203 Single cache domain 3 HQ612_RS09930 PF04397 LytTr DNA-binding domain HQ612_RS09930 PF00072 Response regulator receiver domain HQ612_RS09935 PF03372 Endonuclease/Exonuclease/phosphatase family HQ612_RS09940 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 HQ612_RS09940 PF02378 Phosphotransferase system, EIIC HQ612_RS09940 PF00367 phosphotransferase system, EIIB HQ612_RS09945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQ612_RS09945 PF00989 PAS fold HQ612_RS09945 PF16736 Single Cache-like HQ612_RS09945 PF00512 His Kinase A (phospho-acceptor) domain HQ612_RS09950 PF00486 Transcriptional regulatory protein, C terminal HQ612_RS09950 PF00072 Response regulator receiver domain HQ612_RS09955 PF01895 PhoU domain HQ612_RS09960 PF00005 ABC transporter HQ612_RS09965 PF00528 Binding-protein-dependent transport system inner membrane component HQ612_RS09970 PF00528 Binding-protein-dependent transport system inner membrane component HQ612_RS09975 PF12849 PBP superfamily domain HQ612_RS09985 PF04452 RNA methyltransferase HQ612_RS10000 PF07739 TipAS antibiotic-recognition domain HQ612_RS10000 PF13411 MerR HTH family regulatory protein HQ612_RS10010 PF00293 NUDIX domain HQ612_RS10035 PF00583 Acetyltransferase (GNAT) family HQ612_RS10040 PF05496 Holliday junction DNA helicase RuvB P-loop domain HQ612_RS10040 PF12002 MgsA AAA+ ATPase C terminal HQ612_RS10040 PF16193 AAA C-terminal domain HQ612_RS10075 PF06013 Proteins of 100 residues with WXG HQ612_RS10130 PF00005 ABC transporter HQ612_RS10140 PF01381 Helix-turn-helix HQ612_RS10150 PF03819 MazG nucleotide pyrophosphohydrolase domain HQ612_RS10155 PF03641 Possible lysine decarboxylase HQ612_RS10165 PF00581 Rhodanese-like domain HQ612_RS10170 PF07373 CAMP factor (Cfa) HQ612_RS10180 PF00465 Iron-containing alcohol dehydrogenase HQ612_RS10190 PF02574 Homocysteine S-methyltransferase HQ612_RS10190 PF02219 Methylenetetrahydrofolate reductase HQ612_RS10195 PF01717 Cobalamin-independent synthase, Catalytic domain HQ612_RS10195 PF08267 Cobalamin-independent synthase, N-terminal domain HQ612_RS10205 PF03591 AzlC protein HQ612_RS10210 PF02225 PA domain HQ612_RS10210 PF00082 Subtilase family HQ612_RS10210 PF06280 Fn3-like domain HQ612_RS10215 PF00072 Response regulator receiver domain HQ612_RS10215 PF00486 Transcriptional regulatory protein, C terminal HQ612_RS10220 PF00512 His Kinase A (phospho-acceptor) domain HQ612_RS10220 PF00672 HAMP domain HQ612_RS10220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQ612_RS10230 PF00133 tRNA synthetases class I (I, L, M and V) HQ612_RS10230 PF08264 Anticodon-binding domain of tRNA HQ612_RS10230 PF09334 tRNA synthetases class I (M) HQ612_RS10230 PF13603 Leucyl-tRNA synthetase, Domain 2 HQ612_RS10235 PF07690 Major Facilitator Superfamily HQ612_RS10240 PF01734 Patatin-like phospholipase HQ612_RS10245 PF00467 KOW motif HQ612_RS10245 PF02357 Transcription termination factor nusG HQ612_RS10250 PF17573 GA-like domain HQ612_RS10250 PF00746 LPXTG cell wall anchor motif HQ612_RS10250 PF01378 B domain HQ612_RS10260 PF00471 Ribosomal protein L33 HQ612_RS10265 PF00905 Penicillin binding protein transpeptidase domain HQ612_RS10265 PF00912 Transglycosylase HQ612_RS10270 PF00849 RNA pseudouridylate synthase HQ612_RS10270 PF01479 S4 domain HQ612_RS10280 PF01676 Metalloenzyme superfamily HQ612_RS10285 PF01791 DeoC/LacD family aldolase HQ612_RS10290 PF01773 Na+ dependent nucleoside transporter N-terminus HQ612_RS10290 PF07670 Nucleoside recognition HQ612_RS10290 PF07662 Na+ dependent nucleoside transporter C-terminus HQ612_RS10295 PF01048 Phosphorylase superfamily HQ612_RS10310 PF00118 TCP-1/cpn60 chaperonin family HQ612_RS10315 PF00166 Chaperonin 10 Kd subunit HQ612_RS10320 PF00005 ABC transporter HQ612_RS10325 PF02653 Branched-chain amino acid transport system / permease component HQ612_RS10340 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HQ612_RS10345 PF03883 Peroxide stress protein YaaA HQ612_RS10360 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HQ612_RS10370 PF03477 ATP cone domain HQ612_RS10370 PF13597 Anaerobic ribonucleoside-triphosphate reductase HQ612_RS10380 PF06949 Protein of unknown function (DUF1292) HQ612_RS10385 PF03652 Holliday junction resolvase HQ612_RS10390 PF06135 IreB regulatory phosphoprotein HQ612_RS10395 PF03960 ArsC family HQ612_RS10400 PF00154 recA bacterial DNA recombination protein HQ612_RS10405 PF00994 Probable molybdopterin binding domain HQ612_RS10405 PF02464 Competence-damaged protein HQ612_RS10405 PF18146 Damage-inducible protein CinA KH domain HQ612_RS10410 PF03352 Methyladenine glycosylase HQ612_RS10415 PF07499 RuvA, C-terminal domain HQ612_RS10415 PF01330 RuvA N terminal domain HQ612_RS10425 PF01119 DNA mismatch repair protein, C-terminal domain HQ612_RS10425 PF08676 MutL C terminal dimerisation domain HQ612_RS10430 PF00313 'Cold-shock' DNA-binding domain HQ612_RS10435 PF01624 MutS domain I HQ612_RS10435 PF05188 MutS domain II HQ612_RS10435 PF00488 MutS domain V HQ612_RS10435 PF05192 MutS domain III HQ612_RS10435 PF05190 MutS family domain IV HQ612_RS10440 PF01316 Arginine repressor, DNA binding domain HQ612_RS10440 PF02863 Arginine repressor, C-terminal domain HQ612_RS10445 PF03485 Arginyl tRNA synthetase N terminal domain HQ612_RS10445 PF05746 DALR anticodon binding domain HQ612_RS10445 PF00750 tRNA synthetases class I (R) HQ612_RS10455 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) HQ612_RS10455 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 HQ612_RS10460 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 HQ612_RS10460 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) HQ612_RS10465 PF02938 GAD domain HQ612_RS10465 PF00152 tRNA synthetases class II (D, K and N) HQ612_RS10465 PF01336 OB-fold nucleic acid binding domain HQ612_RS10470 PF03129 Anticodon binding domain HQ612_RS10470 PF13393 Histidyl-tRNA synthetase HQ612_RS10475 PF01783 Ribosomal L32p protein family HQ612_RS10480 PF00471 Ribosomal protein L33 HQ612_RS10495 PF01022 Bacterial regulatory protein, arsR family HQ612_RS10545 PF00512 His Kinase A (phospho-acceptor) domain HQ612_RS10545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQ612_RS10550 PF03606 C4-dicarboxylate anaerobic carrier HQ612_RS10555 PF00696 Amino acid kinase family HQ612_RS10560 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain HQ612_RS10560 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain HQ612_RS10565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HQ612_RS10565 PF00512 His Kinase A (phospho-acceptor) domain HQ612_RS10565 PF00989 PAS fold HQ612_RS10570 PF00072 Response regulator receiver domain HQ612_RS10570 PF08664 YcbB domain HQ612_RS10575 PF00005 ABC transporter HQ612_RS10575 PF00571 CBS domain HQ612_RS10580 PF00528 Binding-protein-dependent transport system inner membrane component HQ612_RS10585 PF09924 Uncharacterised conserved protein (DUF2156) HQ612_RS10585 PF03706 Lysylphosphatidylglycerol synthase TM region HQ612_RS10590 PF00561 alpha/beta hydrolase fold HQ612_RS10595 PF06993 Protein of unknown function (DUF1304) HQ612_RS10600 PF01061 ABC-2 type transporter HQ612_RS10725 PF00589 Phage integrase family HQ612_RS10725 PF14659 Phage integrase, N-terminal SAM-like domain HQ612_RS10730 PF00163 Ribosomal protein S4/S9 N-terminal domain HQ612_RS10730 PF01479 S4 domain HQ612_RS10740 PF03796 DnaB-like helicase C terminal domain HQ612_RS10740 PF00772 DnaB-like helicase N terminal domain HQ612_RS10745 PF03948 Ribosomal protein L9, C-terminal domain HQ612_RS10745 PF01281 Ribosomal protein L9, N-terminal domain HQ612_RS10750 PF01368 DHH family HQ612_RS10750 PF02272 DHHA1 domain HQ612_RS10755 PF01134 Glucose inhibited division protein A HQ612_RS10755 PF13932 GidA associated domain HQ612_RS10760 PF01914 MarC family integral membrane protein HQ612_RS10770 PF01842 ACT domain HQ612_RS10770 PF03315 Serine dehydratase beta chain HQ612_RS10775 PF03313 Serine dehydratase alpha chain HQ612_RS10780 PF06737 Transglycosylase-like domain HQ612_RS10785 PF05257 CHAP domain HQ612_RS10785 PF01476 LysM domain HQ612_RS10790 PF02361 Cobalt transport protein HQ612_RS10795 PF00005 ABC transporter HQ612_RS10800 PF00005 ABC transporter HQ612_RS10805 PF01066 CDP-alcohol phosphatidyltransferase HQ612_RS10810 PF00675 Insulinase (Peptidase family M16) HQ612_RS10810 PF05193 Peptidase M16 inactive domain HQ612_RS10815 PF05193 Peptidase M16 inactive domain HQ612_RS10825 PF02463 RecF/RecN/SMC N terminal domain HQ612_RS10830 PF06800 Sugar transport protein HQ612_RS10840 PF00478 IMP dehydrogenase / GMP reductase domain HQ612_RS10840 PF00571 CBS domain HQ612_RS10845 PF01316 Arginine repressor, DNA binding domain HQ612_RS10845 PF02863 Arginine repressor, C-terminal domain HQ612_RS10850 PF00027 Cyclic nucleotide-binding domain HQ612_RS10850 PF13545 Crp-like helix-turn-helix domain HQ612_RS10865 PF13673 Acetyltransferase (GNAT) domain HQ612_RS10870 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain HQ612_RS10870 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain HQ612_RS10875 PF13520 Amino acid permease HQ612_RS10880 PF00696 Amino acid kinase family HQ612_RS10885 PF00579 tRNA synthetases class I (W and Y) HQ612_RS10895 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 HQ612_RS10895 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) HQ612_RS10900 PF00005 ABC transporter HQ612_RS10900 PF12848 ABC transporter HQ612_RS10905 PF09586 Bacterial membrane protein YfhO HQ612_RS10925 PF02590 Predicted SPOUT methyltransferase HQ612_RS10930 PF13180 PDZ domain HQ612_RS10935 PF02195 ParB-like nuclease domain HQ612_RS10935 PF17762 HTH domain found in ParB protein HQ612_RS10950 PF05649 Peptidase family M13 HQ612_RS10950 PF01431 Peptidase family M13