locus-tag	class	description
DY328_RS00015	COG0745	RESPONSE REGULATOR receiver
DY328_RS00020	COG2357	RelA SpoT domain protein
DY328_RS00025	COG1132	(ABC) transporter
DY328_RS00040	COG0737	Belongs to the 5'-nucleotidase family
DY328_RS00045	COG0242	peptide deformylase activity
DY328_RS00050	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
DY328_RS00060	COG1132	(ABC) transporter
DY328_RS00075	COG0488	(ABC) transporter
DY328_RS00105	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
DY328_RS00105	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
DY328_RS00105	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
DY328_RS00110	COG1105	Belongs to the carbohydrate kinase PfkB family
DY328_RS00115	COG1349	DNA-binding transcription factor activity
DY328_RS00120	COG1705	Flagellar rod assembly protein muramidase FlgJ
DY328_RS00120	COG1388	LysM domain
DY328_RS00170	COG1837	Belongs to the UPF0109 family
DY328_RS00175	COG0228	four-way junction DNA binding
DY328_RS00180	COG0577	efflux transmembrane transporter activity
DY328_RS00185	COG1136	(ABC) transporter
DY328_RS00190	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
DY328_RS00200	COG0505	Belongs to the CarA family
DY328_RS00210	COG0564	pseudouridine synthase activity
DY328_RS00220	COG0583	DNA-binding transcription factor activity
DY328_RS00225	COG0211	Belongs to the bacterial ribosomal protein bL27 family
DY328_RS00250	COG1104	cysteine desulfurase activity
DY328_RS00260	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
DY328_RS00285	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
DY328_RS00290	COG1368	sulfuric ester hydrolase activity
DY328_RS00295	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
DY328_RS00305	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
DY328_RS00335	COG2244	polysaccharide biosynthetic process
DY328_RS00345	COG1120	ATPase activity
DY328_RS00350	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
DY328_RS00355	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
DY328_RS00360	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
DY328_RS00375	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
DY328_RS00380	COG1253	flavin adenine dinucleotide binding
DY328_RS00385	COG2519	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
DY328_RS00390	COG1242	4 iron, 4 sulfur cluster binding
DY328_RS00395	COG0671	phosphoesterase, PA-phosphatase related
DY328_RS00400	COG3601	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
DY328_RS00440	COG0297	glycogen (starch) synthase activity
DY328_RS00480	COG3475	LICD family
DY328_RS00495	COG0463	Glycosyl transferase, family 2
DY328_RS00500	COG1215	transferase activity, transferring glycosyl groups
DY328_RS00510	COG1091	dTDP-4-dehydrorhamnose reductase activity
DY328_RS00515	COG2151	metal-sulfur cluster biosynthetic enzyme
DY328_RS00520	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
DY328_RS00525	COG0358	DNA primase activity
DY328_RS00530	COG1970	mechanosensitive ion channel activity
DY328_RS00545	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
DY328_RS00550	COG0004	ammonium transporteR
DY328_RS00560	COG1054	Belongs to the UPF0176 family
DY328_RS00570	COG2271	Major facilitator Superfamily
DY328_RS00580	COG0058	SHG alpha-glucan phosphorylase activity
DY328_RS00585	COG1640	4-alpha-glucanotransferase
DY328_RS00590	COG1609	Transcriptional regulator
DY328_RS00600	COG1175	transmembrane transport
DY328_RS00605	COG3833	ABC-type maltose transport systems, permease component
DY328_RS00610	COG3104	oligopeptide transport
DY328_RS00630	COG0438	transferase activity, transferring glycosyl groups
DY328_RS00680	COG0488	(ABC) transporter
DY328_RS00705	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
DY328_RS00725	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
DY328_RS00790	COG0765	amino acid transport
DY328_RS00795	COG1126	abc transporter atp-binding protein
DY328_RS00820	COG2309	aminopeptidase activity
DY328_RS00830	COG0154	amidase activity
DY328_RS00835	COG1187	pseudouridine synthase activity
DY328_RS00840	COG0656	L-ascorbic acid biosynthetic process
DY328_RS00850	COG0346	lactoylglutathione lyase activity
DY328_RS00855	COG0463	Glycosyl transferase, family 2
DY328_RS00860	COG1113	amino acid transport
DY328_RS00865	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
DY328_RS00870	COG0557	exoribonuclease II activity
DY328_RS00885	COG2814	Major facilitator Superfamily
DY328_RS00895	COG1131	(ABC) transporter
DY328_RS00905	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
DY328_RS00910	COG1396	sequence-specific DNA binding
DY328_RS00965	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
DY328_RS00970	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
DY328_RS01000	COG1702	phosphate starvation-inducible protein PhoH
DY328_RS01025	COG0233	cytoplasmic translational termination
DY328_RS01040	COG0444	Belongs to the ABC transporter superfamily
DY328_RS01045	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
DY328_RS01050	COG0601	transmembrane transport
DY328_RS01055	COG0747	negative chemotaxis
DY328_RS01060	COG0081	regulation of translation
DY328_RS01080	COG1473	amidohydrolase
DY328_RS01085	COG0583	DNA-binding transcription factor activity
DY328_RS01105	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
DY328_RS01115	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
DY328_RS01140	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
DY328_RS01175	COG0673	inositol 2-dehydrogenase activity
DY328_RS01190	COG1028	Short-chain dehydrogenase reductase Sdr
DY328_RS01245	COG1114	Component of the transport system for branched-chain amino acids
DY328_RS01250	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
DY328_RS01250	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
DY328_RS01270	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
DY328_RS01280	COG0708	Exodeoxyribonuclease III
DY328_RS01285	COG1393	Belongs to the ArsC family
DY328_RS01290	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
DY328_RS01295	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
DY328_RS01335	COG0470	DNA polymerase III
DY328_RS01350	COG0517	IMP dehydrogenase activity
DY328_RS01370	COG0559	Belongs to the binding-protein-dependent transport system permease family
DY328_RS01390	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
DY328_RS01395	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
DY328_RS01405	COG0531	amino acid
DY328_RS01410	COG0569	domain protein
DY328_RS01415	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
DY328_RS01425	COG1187	pseudouridine synthase activity
DY328_RS01475	COG1827	regulation of RNA biosynthetic process
DY328_RS01490	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
DY328_RS01495	COG1254	Belongs to the acylphosphatase family
DY328_RS01505	COG0765	amino acid transport
DY328_RS01510	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
DY328_RS01525	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
DY328_RS01560	COG1484	DNA-dependent DNA replication
DY328_RS01575	COG5002	protein histidine kinase activity
DY328_RS01580	COG0745	RESPONSE REGULATOR receiver
DY328_RS01595	COG1704	LemA family
DY328_RS01605	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
DY328_RS01610	COG0569	domain protein
DY328_RS01635	COG1114	Component of the transport system for branched-chain amino acids
DY328_RS01640	COG1063	alcohol dehydrogenase
DY328_RS01665	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
DY328_RS01670	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
DY328_RS01680	COG0217	transcriptional regulatory protein
DY328_RS01690	COG2376	Dihydroxyacetone kinase
DY328_RS01695	COG1309	transcriptional regulator
DY328_RS01705	COG2376	Dihydroxyacetone kinase
DY328_RS01710	COG1461	Dihydroxyacetone kinase
DY328_RS01715	COG3412	dihydroxyacetone kinase, phosphotransfer subunit
DY328_RS01720	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
DY328_RS01730	COG0789	Transcriptional regulator
DY328_RS01745	COG2226	methyltransferase
DY328_RS01750	COG0799	negative regulation of ribosome biogenesis
DY328_RS01760	COG1713	HD superfamily hydrolase involved in NAD metabolism
DY328_RS01765	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
DY328_RS01770	COG1534	Rna-binding protein
DY328_RS01775	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
DY328_RS01780	COG2179	HAD superfamily (subfamily IIIA) phosphatase, TIGR01668
DY328_RS01805	COG0574	Belongs to the PEP-utilizing enzyme family
DY328_RS01805	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
DY328_RS01815	COG0517	IMP dehydrogenase activity
DY328_RS01825	COG1335	isochorismatase
DY328_RS01830	COG4465	DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor
DY328_RS01835	COG0436	Aminotransferase
DY328_RS01840	COG0589	response to stress
DY328_RS01845	COG0561	phosphatase activity
DY328_RS01850	COG0252	asparaginase activity
DY328_RS01860	COG4989	oxidoreductase activity
DY328_RS01865	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
DY328_RS01870	COG1705	Flagellar rod assembly protein muramidase FlgJ
DY328_RS01870	COG3942	CHAP domain
DY328_RS01880	COG0736	holo-[acyl-carrier-protein] synthase activity
DY328_RS01885	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
DY328_RS01895	COG5433	transposase activity
DY328_RS01900	COG1482	cell wall glycoprotein biosynthetic process
DY328_RS01905	COG1940	carbohydrate kinase activity
DY328_RS01910	COG1263	PTS System
DY328_RS01910	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
DY328_RS01910	COG2190	(PTS) system
DY328_RS01915	COG1621	beta-fructofuranosidase activity
DY328_RS01920	COG1609	Transcriptional regulator
DY328_RS01925	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
DY328_RS01935	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
DY328_RS01990	COG2131	deaminase
DY328_RS02005	COG2814	Major facilitator Superfamily
DY328_RS02035	COG0629	single-stranded DNA binding
DY328_RS02040	COG0360	Binds together with S18 to 16S ribosomal RNA
DY328_RS02045	COG1194	a g-specific adenine glycosylase
DY328_RS02055	COG3118	belongs to the thioredoxin family
DY328_RS02085	COG0681	Belongs to the peptidase S26 family
DY328_RS02090	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
DY328_RS02105	COG1882	Formate acetyltransferase
DY328_RS02110	COG3576	pyridoxamine 5-phosphate
DY328_RS02115	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
DY328_RS02130	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
DY328_RS02140	COG2814	Major facilitator Superfamily
DY328_RS02145	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
DY328_RS02160	COG0142	geranyltranstransferase activity
DY328_RS02165	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
DY328_RS02170	COG4988	ABC transporter
DY328_RS02175	COG1294	oxidase, subunit
DY328_RS02180	COG1271	oxidase subunit
DY328_RS02185	COG1252	NADH dehydrogenase
DY328_RS02210	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
DY328_RS02215	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
DY328_RS02220	COG0789	Transcriptional regulator
DY328_RS02235	COG2081	HI0933 family
DY328_RS02265	COG0456	acetyltransferase
DY328_RS02270	COG1214	PFAM Peptidase M22, glycoprotease
DY328_RS02285	COG3942	CHAP domain
DY328_RS02290	COG0174	glutamine synthetase
DY328_RS02295	COG0789	Transcriptional regulator
DY328_RS02310	COG2503	HAD superfamily, subfamily IIIB (Acid phosphatase)
DY328_RS02340	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
DY328_RS02390	COG0084	hydrolase, TatD family'
DY328_RS02415	COG3966	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
DY328_RS02420	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
DY328_RS02425	COG1696	Membrane protein involved in D-alanine export
DY328_RS02445	COG0745	RESPONSE REGULATOR receiver
DY328_RS02460	COG5433	transposase activity
DY328_RS02465	COG3314	Sporulation integral membrane protein YlbJ
DY328_RS02480	COG4175	Glycine betaine
DY328_RS02480	COG3448	diguanylate cyclase activity
DY328_RS02490	COG3957	D-xylulose 5-phosphate D-fructose 6-phosphate phosphoketolase
DY328_RS02520	COG3775	system Galactitol-specific IIC component
DY328_RS02525	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
DY328_RS02535	COG1609	Transcriptional regulator
DY328_RS02585	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
DY328_RS02615	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
DY328_RS02620	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
DY328_RS02625	COG1428	Deoxynucleoside kinase
DY328_RS02635	COG0542	response to heat
DY328_RS02640	COG4463	regulation of RNA biosynthetic process
DY328_RS02650	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
DY328_RS02660	COG0450	alkyl hydroperoxide reductase
DY328_RS02675	COG0025	NhaP-type Na H and K H
DY328_RS02685	COG1619	proteins homologs of microcin C7 resistance protein MccF
DY328_RS02690	COG3590	peptidase
DY328_RS02720	COG1609	Transcriptional regulator
DY328_RS02730	COG3716	PTS system mannose fructose sorbose family IID component
DY328_RS02735	COG3715	PTS system
DY328_RS02740	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
DY328_RS02745	COG4225	unsaturated rhamnogalacturonyl hydrolase activity
DY328_RS02760	COG1028	Short-chain dehydrogenase reductase Sdr
DY328_RS02800	COG2176	DNA-directed DNA polymerase activity
DY328_RS02805	COG1705	Flagellar rod assembly protein muramidase FlgJ
DY328_RS02805	COG1388	LysM domain
DY328_RS02820	COG4589	Belongs to the CDS family
DY328_RS02825	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
DY328_RS02830	COG1862	Preprotein translocase
DY328_RS02850	COG3493	citrate carrier protein
DY328_RS02855	COG3290	protein histidine kinase activity
DY328_RS02860	COG4565	transcriptional regulatory protein
DY328_RS02865	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
DY328_RS02875	COG3842	ATPase activity
DY328_RS02945	COG1490	D-aminoacyl-tRNA deacylase activity
DY328_RS02955	COG0737	Belongs to the 5'-nucleotidase family
DY328_RS02965	COG1363	Peptidase, m42
DY328_RS02980	COG2207	Transcriptional regulator
DY328_RS02980	COG4753	response regulator
DY328_RS02990	COG3716	PTS system mannose fructose sorbose family IID component
DY328_RS02995	COG3715	PTS system
DY328_RS03025	COG1131	(ABC) transporter
DY328_RS03035	COG3279	Response regulator of the LytR AlgR family
DY328_RS03045	COG1263	PTS System
DY328_RS03045	COG2190	(PTS) system
DY328_RS03045	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
DY328_RS03050	COG5002	protein histidine kinase activity
DY328_RS03055	COG0745	RESPONSE REGULATOR receiver
DY328_RS03065	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
DY328_RS03070	COG0581	inorganic phosphate transmembrane transporter activity
DY328_RS03075	COG0573	inorganic phosphate transmembrane transporter activity
DY328_RS03090	COG1385	rRNA (uridine-N3-)-methyltransferase activity
DY328_RS03105	COG0789	Transcriptional regulator
DY328_RS03130	COG0456	acetyltransferase
DY328_RS03135	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
DY328_RS03150	COG0582	viral genome integration into host DNA
DY328_RS03195	COG0433	COG0433 Predicted ATPase
DY328_RS03215	COG4115	mRNA cleavage
DY328_RS03260	COG1674	ftsk spoiiie
DY328_RS03295	COG1914	H( )-stimulated, divalent metal cation uptake system
DY328_RS03305	COG1131	(ABC) transporter
DY328_RS03345	COG1131	(ABC) transporter
DY328_RS03355	COG1396	sequence-specific DNA binding
DY328_RS03365	COG1694	Mazg nucleotide pyrophosphohydrolase
DY328_RS03400	COG0371	Dehydrogenase
DY328_RS03410	COG0646	methionine synthase
DY328_RS03410	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
DY328_RS03415	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
DY328_RS03425	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
DY328_RS03440	COG0745	RESPONSE REGULATOR receiver
DY328_RS03445	COG2770	Histidine kinase
DY328_RS03445	COG2205	protein histidine kinase activity
DY328_RS03455	COG0495	leucyl-tRNA aminoacylation
DY328_RS03460	COG2814	Major facilitator Superfamily
DY328_RS03465	COG4667	esterase of the alpha-beta hydrolase superfamily
DY328_RS03470	COG1442	glycosyl transferase family 8
DY328_RS03475	COG1442	glycosyl transferase family 8
DY328_RS03500	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
DY328_RS03505	COG0564	pseudouridine synthase activity
DY328_RS03525	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
DY328_RS03530	COG2820	Catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1- phosphate. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis
DY328_RS03550	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
DY328_RS03555	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
DY328_RS03555	COG1116	anion transmembrane transporter activity
DY328_RS03565	COG0561	phosphatase activity
DY328_RS03570	COG2514	catechol 2,3-dioxygenase activity
DY328_RS03580	COG0602	queuosine metabolic process
DY328_RS03600	COG1328	CTP reductase activity
DY328_RS03620	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
DY328_RS03630	COG1393	Belongs to the ArsC family
DY328_RS03635	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
DY328_RS03645	COG2818	Glycosylase
DY328_RS03660	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
DY328_RS03695	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
DY328_RS03700	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
DY328_RS03710	COG0124	histidyl-tRNA synthetase
DY328_RS03720	COG0267	Belongs to the bacterial ribosomal protein bL33 family
DY328_RS03730	COG0745	RESPONSE REGULATOR receiver
DY328_RS03735	COG5002	protein histidine kinase activity
DY328_RS03740	COG1288	antiporter activity
DY328_RS03750	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
DY328_RS03755	COG3852	Histidine kinase
DY328_RS03760	COG0784	Response regulator, receiver
DY328_RS03765	COG0517	IMP dehydrogenase activity
DY328_RS03765	COG1125	glycine betaine transport
DY328_RS03770	COG1174	glycine betaine transport
DY328_RS03775	COG0392	lysyltransferase activity
DY328_RS03775	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
DY328_RS03785	COG3759	membrane
DY328_RS03895	COG1396	sequence-specific DNA binding
DY328_RS03900	COG2314	TM2 domain
DY328_RS03910	COG0582	viral genome integration into host DNA
DY328_RS03925	COG0305	Participates in initiation and elongation during chromosome replication
DY328_RS03940	COG0445	tRNA wobble uridine modification
DY328_RS03945	COG2095	MarC family integral membrane protein
DY328_RS03950	COG0482	sulfurtransferase activity
DY328_RS03955	COG1760	l-serine dehydratase
DY328_RS03960	COG1760	l-serine dehydratase
DY328_RS03965	COG0741	lytic transglycosylase activity
DY328_RS03990	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
DY328_RS03995	COG0612	Peptidase, M16
DY328_RS04000	COG0612	Peptidase, M16
DY328_RS04005	COG2501	S4 domain
DY328_RS04025	COG0517	IMP dehydrogenase activity
DY328_RS04025	COG0516	GMP reductase activity
DY328_RS04035	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
DY328_RS04050	COG0454	-acetyltransferase
DY328_RS04055	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
DY328_RS04080	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
DY328_RS04085	COG0488	(ABC) transporter
DY328_RS04090	COG4485	Bacterial membrane protein, YfhO
DY328_RS04110	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
DY328_RS04115	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
DY328_RS04120	COG1475	DNA binding
DY328_RS04130	COG0592	DNA-directed DNA polymerase activity
DY328_RS04135	COG1597	lipid kinase activity
DY328_RS04150	COG0012	GTP binding
DY328_RS04160	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
DY328_RS04170	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
DY328_RS04200	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
DY328_RS04385	COG0436	Aminotransferase
DY328_RS04400	COG0416	fatty acid biosynthetic process
DY328_RS04405	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
DY328_RS04415	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
DY328_RS04430	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
DY328_RS04440	COG0138	bifunctional purine biosynthesis protein purh
DY328_RS04455	COG3010	Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P)
DY328_RS04465	COG1175	transmembrane transport
DY328_RS04470	COG0395	ABC-type sugar transport system, permease component
DY328_RS04485	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
DY328_RS04495	COG3458	cephalosporin-C deacetylase activity
DY328_RS04510	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
DY328_RS04525	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
DY328_RS04540	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
DY328_RS04550	COG2755	lipolytic protein G-D-S-L family
DY328_RS04550	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
DY328_RS04555	COG1454	alcohol dehydrogenase
DY328_RS04555	COG1012	belongs to the aldehyde dehydrogenase family
DY328_RS04560	COG1064	alcohol dehydrogenase
DY328_RS04570	COG0534	Mate efflux family protein
DY328_RS04680	COG0201	protein transport
DY328_RS04685	COG0563	adenylate kinase activity
DY328_RS04700	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
DY328_RS04710	COG0202	RNA polymerase activity
DY328_RS04855	COG1705	Flagellar rod assembly protein muramidase FlgJ
DY328_RS04870	COG0443	Heat shock 70 kDa protein
DY328_RS04880	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
DY328_RS04890	COG0351	phosphomethylpyrimidine kinase
DY328_RS04895	COG4720	Psort location CytoplasmicMembrane, score
DY328_RS04905	COG0668	transmembrane transport
DY328_RS04935	COG0756	dUTP diphosphatase activity
DY328_RS04950	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
DY328_RS04960	COG1879	ABC-type sugar transport system periplasmic component
DY328_RS04965	COG1172	Belongs to the binding-protein-dependent transport system permease family
DY328_RS04980	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
DY328_RS04985	COG1609	Transcriptional regulator
DY328_RS04995	COG0577	efflux transmembrane transporter activity
DY328_RS05000	COG1136	(ABC) transporter
DY328_RS05005	COG0745	RESPONSE REGULATOR receiver
DY328_RS05010	COG5002	protein histidine kinase activity
DY328_RS05025	COG0191	fructose-bisphosphate aldolase activity
DY328_RS05045	COG1461	Dihydroxyacetone kinase
DY328_RS05065	COG1126	abc transporter atp-binding protein
DY328_RS05070	COG0765	amino acid transport
DY328_RS05090	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
DY328_RS05100	COG0719	Fe-S assembly protein
DY328_RS05105	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
DY328_RS05115	COG0719	Fe-S assembly protein
DY328_RS05120	COG1686	Belongs to the peptidase S11 family
DY328_RS05125	COG1686	Belongs to the peptidase S11 family
DY328_RS05130	COG4166	transmembrane transport
DY328_RS05135	COG0601	transmembrane transport
DY328_RS05140	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
DY328_RS05145	COG0444	Belongs to the ABC transporter superfamily
DY328_RS05150	COG4608	Belongs to the ABC transporter superfamily
DY328_RS05190	COG1121	(ABC) transporter
DY328_RS05195	COG1108	ABC-type Mn2 Zn2 transport systems permease components
DY328_RS05210	COG4499	WXG100 protein secretion system (Wss), protein YukC
DY328_RS05210	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
DY328_RS05240	COG1459	type II secretion system
DY328_RS05285	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
DY328_RS05290	COG1363	Peptidase, m42
DY328_RS05305	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
DY328_RS05310	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
DY328_RS05325	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
DY328_RS05345	COG1346	cytolysis
DY328_RS05360	COG0601	transmembrane transport
DY328_RS05365	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
DY328_RS05370	COG1122	ATPase activity
DY328_RS05380	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
DY328_RS05380	COG1263	PTS System
DY328_RS05385	COG0366	Alpha amylase catalytic
DY328_RS05390	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
DY328_RS05405	COG3959	Transketolase, thiamine diphosphate binding domain
DY328_RS05410	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
DY328_RS05415	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
DY328_RS05435	COG1045	serine acetyltransferase
DY328_RS05450	COG1939	Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
DY328_RS05480	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
DY328_RS05490	COG4974	Belongs to the 'phage' integrase family
DY328_RS05510	COG1705	Flagellar rod assembly protein muramidase FlgJ
DY328_RS05510	COG3942	CHAP domain
DY328_RS05525	COG0433	COG0433 Predicted ATPase
DY328_RS05565	COG1674	ftsk spoiiie
DY328_RS05600	COG1396	sequence-specific DNA binding
DY328_RS05645	COG4974	Belongs to the 'phage' integrase family
DY328_RS05755	COG1396	sequence-specific DNA binding
DY328_RS05760	COG2814	Major facilitator Superfamily
DY328_RS05770	COG1732	Glycine betaine
DY328_RS05865	COG0582	viral genome integration into host DNA
DY328_RS05945	COG0519	Catalyzes the synthesis of GMP from XMP
DY328_RS05995	COG1695	Transcriptional regulator
DY328_RS06010	COG1755	Isoprenylcysteine carboxyl methyltransferase
DY328_RS06050	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
DY328_RS06055	COG0446	pyridine nucleotide-disulphide oxidoreductase
DY328_RS06075	COG1131	(ABC) transporter
DY328_RS06085	COG2190	(PTS) system
DY328_RS06085	COG1263	PTS System
DY328_RS06085	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
DY328_RS06090	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
DY328_RS06110	COG0768	penicillin binding
DY328_RS06120	COG0513	Belongs to the DEAD box helicase family
DY328_RS06135	COG1126	abc transporter atp-binding protein
DY328_RS06145	COG0492	ferredoxin-NADP+ reductase activity
DY328_RS06150	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
DY328_RS06160	COG3579	cysteine-type endopeptidase activity
DY328_RS06165	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
DY328_RS06195	COG0116	Belongs to the methyltransferase superfamily
DY328_RS06205	COG1854	S-ribosylhomocysteine lyase activity
DY328_RS06210	COG4372	Transposase
DY328_RS06210	COG1418	mRNA catabolic process
DY328_RS06220	COG1131	(ABC) transporter
DY328_RS06235	COG4585	Histidine kinase
DY328_RS06240	COG2197	response regulator
DY328_RS06250	COG0194	GDP metabolic process
DY328_RS06260	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
DY328_RS06265	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
DY328_RS06270	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
DY328_RS06270	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
DY328_RS06280	COG0515	serine threonine protein kinase
DY328_RS06280	COG2815	serine threonine protein kinase
DY328_RS06290	COG4585	Histidine kinase
DY328_RS06295	COG2197	response regulator
DY328_RS06305	COG1098	S1 RNA binding domain
DY328_RS06310	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
DY328_RS06315	COG1349	DNA-binding transcription factor activity
DY328_RS06325	COG1447	Phosphotransferase system cellobiose-specific component IIA
DY328_RS06335	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
DY328_RS06340	COG1882	Formate acetyltransferase
DY328_RS06360	COG1739	Uncharacterized protein family UPF0029
DY328_RS06365	COG4098	Superfamily II DNA RNA helicase required for DNA uptake (late competence protein)
DY328_RS06370	COG1040	competence protein
DY328_RS06405	COG0527	aspartate kinase activity
DY328_RS06410	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
DY328_RS06420	COG1024	Enoyl-CoA hydratase
DY328_RS06430	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
DY328_RS06440	COG2070	2-Nitropropane dioxygenase
DY328_RS06445	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
DY328_RS06450	COG1028	Short-chain dehydrogenase reductase Sdr
DY328_RS06455	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
DY328_RS06470	COG0439	Biotin carboxylase
DY328_RS06490	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
DY328_RS06505	COG3716	PTS system mannose fructose sorbose family IID component
DY328_RS06510	COG3715	PTS system
DY328_RS06525	COG0561	phosphatase activity
DY328_RS06540	COG2252	PERMEase
DY328_RS06545	COG0802	atpase or kinase
DY328_RS06555	COG1316	TRANSCRIPTIONal
DY328_RS06565	COG0537	adenosine 5'-monophosphoramidase activity
DY328_RS06580	COG1131	(ABC) transporter
DY328_RS06585	COG4473	ABC transporter
DY328_RS06595	COG0220	tRNA (guanine-N7-)-methyltransferase activity
DY328_RS06610	COG0195	Participates in both transcription termination and antitermination
DY328_RS06615	COG2740	Nucleic-acid-binding protein implicated in transcription termination
DY328_RS06625	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
DY328_RS06630	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
DY328_RS06655	COG2860	membrane
DY328_RS06665	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
DY328_RS06665	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
DY328_RS06670	COG1832	CoA-binding protein
DY328_RS06690	COG5002	protein histidine kinase activity
DY328_RS06710	COG1268	BioY protein
DY328_RS06715	COG1234	tRNA 3'-trailer cleavage
DY328_RS06730	COG0166	Belongs to the GPI family
DY328_RS06735	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
DY328_RS06740	COG0457	Tetratricopeptide repeat
DY328_RS06740	COG0705	Rhomboid family
DY328_RS06745	COG1744	ABC transporter substrate-binding protein PnrA-like
DY328_RS06750	COG1210	Utp--glucose-1-phosphate uridylyltransferase
DY328_RS06835	COG2153	protein acetylation
DY328_RS06845	COG1442	glycosyl transferase family 8
DY328_RS06845	COG1216	Glycosyl transferase, family 2
DY328_RS06885	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
DY328_RS06895	COG0789	Transcriptional regulator
DY328_RS06900	COG1063	alcohol dehydrogenase
DY328_RS06905	COG0656	L-ascorbic acid biosynthetic process
DY328_RS06960	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
DY328_RS06975	COG0673	inositol 2-dehydrogenase activity
DY328_RS06985	COG3328	transposase activity
DY328_RS06990	COG2315	Protein conserved in bacteria
DY328_RS07010	COG0742	ribosomal rna small subunit methyltransferase
DY328_RS07025	COG3480	Lon protease (S16) C-terminal proteolytic domain
DY328_RS07035	COG4470	Protein conserved in bacteria
DY328_RS07050	COG1132	(ABC) transporter
DY328_RS07055	COG1132	(ABC) transporter
DY328_RS07060	COG0512	Glutamine amidotransferase of anthranilate synthase
DY328_RS07065	COG1268	BioY protein
DY328_RS07080	COG0183	Belongs to the thiolase family
DY328_RS07090	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
DY328_RS07105	COG1940	carbohydrate kinase activity
DY328_RS07110	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
DY328_RS07115	COG1217	gtp-binding protein TYPA
DY328_RS07150	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
DY328_RS07160	COG0762	integral membrane protein
DY328_RS07165	COG2302	S4 RNA-binding domain
DY328_RS07170	COG3599	regulation of cell shape
DY328_RS07185	COG0494	nUDIX hydrolase
DY328_RS07190	COG0542	response to heat
DY328_RS07200	COG4703	Protein of unknown function (DUF1797)
DY328_RS07205	COG0765	amino acid transport
DY328_RS07210	COG1126	abc transporter atp-binding protein
DY328_RS07215	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
DY328_RS07225	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
DY328_RS07235	COG1722	exodeoxyribonuclease VII activity
DY328_RS07245	COG1189	Ribosomal RNA methyltransferase RrmJ FtsJ
DY328_RS07250	COG1438	arginine binding
DY328_RS07255	COG0497	DNA recombination
DY328_RS07260	COG1307	EDD domain protein, DegV family
DY328_RS07265	COG2755	lipolytic protein G-D-S-L family
DY328_RS07310	COG1078	dGTPase activity
DY328_RS07335	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
DY328_RS07345	COG2884	Cell division ATP-binding protein ftsE
DY328_RS07350	COG2177	Part of the ABC transporter FtsEX involved in
DY328_RS07370	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
DY328_RS07370	COG1199	ATP-dependent helicase activity
DY328_RS07375	COG0436	Aminotransferase
DY328_RS07380	COG0017	Asparaginyl-tRNA synthetase
DY328_RS07405	COG1660	Displays ATPase and GTPase activities
DY328_RS07430	COG0254	rRNA binding
DY328_RS07435	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
DY328_RS07440	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
DY328_RS07445	COG0716	FMN binding
DY328_RS07450	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
DY328_RS07450	COG1605	Chorismate mutase
DY328_RS07455	COG0038	chloride channel
DY328_RS07465	COG0335	large ribosomal subunit rRNA binding
DY328_RS07475	COG0582	viral genome integration into host DNA
DY328_RS07490	COG1396	sequence-specific DNA binding
DY328_RS07495	COG3422	double-strand break repair
DY328_RS07645	COG1598	PFAM Uncharacterised protein family UPF0150
DY328_RS07830	COG1136	(ABC) transporter
DY328_RS07845	COG5002	protein histidine kinase activity
DY328_RS07865	COG0772	Belongs to the SEDS family
DY328_RS07885	COG0560	Phosphoserine phosphatase
DY328_RS07900	COG5433	transposase activity
DY328_RS07905	COG0148	phosphopyruvate hydratase activity
DY328_RS07925	COG1316	TRANSCRIPTIONal
DY328_RS07975	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
DY328_RS07975	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
DY328_RS08020	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
DY328_RS08080	COG4695	Portal protein
DY328_RS08085	COG0740	serine-type endopeptidase activity
DY328_RS08150	COG5433	transposase activity
DY328_RS08175	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
DY328_RS08200	COG3700	Belongs to the class B bacterial acid phosphatase family
DY328_RS08305	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
DY328_RS08310	COG4555	ABC transporter
DY328_RS08340	COG1028	Short-chain dehydrogenase reductase Sdr
DY328_RS08345	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
DY328_RS08350	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
DY328_RS08370	COG0404	The glycine cleavage system catalyzes the degradation of glycine
DY328_RS08375	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
DY328_RS08395	COG3064	Membrane
DY328_RS08395	COG3087	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
DY328_RS08410	COG3590	peptidase
DY328_RS08415	COG3590	peptidase
DY328_RS08465	COG1136	(ABC) transporter
DY328_RS08480	COG0586	Pfam SNARE associated Golgi protein
DY328_RS08485	COG4619	ABC transporter
DY328_RS08490	COG0390	transport system, permease component
DY328_RS08500	COG0583	DNA-binding transcription factor activity
DY328_RS08510	COG5433	transposase activity
DY328_RS08525	COG2211	Major facilitator Superfamily
DY328_RS08535	COG3250	beta-galactosidase activity
DY328_RS08540	COG2186	Transcriptional regulator
DY328_RS08550	COG0800	Aldolase
DY328_RS08565	COG1028	Short-chain dehydrogenase reductase Sdr
DY328_RS08585	COG1609	Transcriptional regulator
DY328_RS08600	COG0438	transferase activity, transferring glycosyl groups
DY328_RS08625	COG0765	amino acid transport
DY328_RS08630	COG0765	amino acid transport
DY328_RS08635	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
DY328_RS08640	COG1126	abc transporter atp-binding protein
DY328_RS08645	COG0745	RESPONSE REGULATOR receiver
DY328_RS08650	COG5002	protein histidine kinase activity
DY328_RS08655	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
DY328_RS08660	COG2832	Protein of unknown function (DUF454)
DY328_RS08670	COG1196	nuclear chromosome segregation
DY328_RS08675	COG0561	phosphatase activity
DY328_RS08680	COG0561	phosphatase activity
DY328_RS08685	COG0552	protein localization to endoplasmic reticulum
DY328_RS08690	COG3689	TIGRFAM TIGR03943 family protein
DY328_RS08695	COG0701	Predicted permease
DY328_RS08710	COG2183	response to ionizing radiation
DY328_RS08715	COG3091	SprT-like family
DY328_RS08720	COG1983	PspC domain protein
DY328_RS08760	COG0826	peptidase U32
DY328_RS08765	COG4443	Transcriptional Coactivator p15 (PC4)
DY328_RS08775	COG1914	H( )-stimulated, divalent metal cation uptake system
DY328_RS08790	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
DY328_RS08790	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
DY328_RS08815	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
DY328_RS08840	COG1164	Oligoendopeptidase f
DY328_RS08850	COG0772	Belongs to the SEDS family
DY328_RS08870	COG0768	penicillin binding
DY328_RS08885	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
DY328_RS08890	COG2223	nitrite transmembrane transporter activity
DY328_RS08915	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
DY328_RS08920	COG2011	ABC-type metal ion transport system permease component
DY328_RS08925	COG1464	Belongs to the NlpA lipoprotein family
DY328_RS08930	COG0513	Belongs to the DEAD box helicase family
DY328_RS08940	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
DY328_RS08945	COG0204	Acyl-transferase
DY328_RS08950	COG1596	polysaccharide export
DY328_RS08950	COG1555	photosystem II stabilization
DY328_RS08955	COG0658	competence protein
DY328_RS08955	COG2333	competence protein COMEC
DY328_RS08960	COG0561	phosphatase activity
DY328_RS08965	COG1609	Transcriptional regulator
DY328_RS08970	COG0657	acetylesterase activity
DY328_RS08975	COG2226	methyltransferase
DY328_RS08985	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
DY328_RS08990	COG3711	transcriptional antiterminator
DY328_RS08995	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
DY328_RS08995	COG2190	(PTS) system
DY328_RS08995	COG1263	PTS System
DY328_RS09005	COG3835	regulator
DY328_RS09010	COG1929	Belongs to the glycerate kinase type-1 family
DY328_RS09015	COG2610	gluconate transmembrane transporter activity
DY328_RS09025	COG1846	Transcriptional regulator
DY328_RS09040	COG0363	glucosamine-6-phosphate deaminase activity
DY328_RS09045	COG0435	Glutathione S-transferase
DY328_RS09050	COG1187	pseudouridine synthase activity
DY328_RS09075	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
DY328_RS09080	COG4122	O-methyltransferase activity
DY328_RS09090	COG4894	glucomannan catabolic process
DY328_RS09100	COG1811	Na channel or pump
DY328_RS09105	COG1442	glycosyl transferase family 8
DY328_RS09120	COG1476	TRANSCRIPTIONal
DY328_RS09135	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
DY328_RS09140	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
DY328_RS09145	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
DY328_RS09160	COG1012	belongs to the aldehyde dehydrogenase family
DY328_RS09165	COG0726	polysaccharide deacetylase
DY328_RS09180	COG1956	GAF domain-containing protein
DY328_RS09185	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
DY328_RS09195	COG1654	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon
DY328_RS09195	COG0340	biotin-[acetyl-CoA-carboxylase] ligase activity
DY328_RS09225	COG4721	ABC-type cobalt transport system, permease component
DY328_RS09230	COG1122	ATPase activity
DY328_RS09240	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
DY328_RS09270	COG4109	DRTGG domain
DY328_RS09275	COG0024	Methionine aminopeptidase
DY328_RS09285	COG2246	polysaccharide biosynthetic process
DY328_RS09290	COG4708	membrane
DY328_RS09300	COG1597	lipid kinase activity
DY328_RS09305	COG1523	belongs to the glycosyl hydrolase 13 family
DY328_RS09320	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
DY328_RS09405	COG2321	neutral zinc metallopeptidase
DY328_RS09430	COG0488	(ABC) transporter
DY328_RS09435	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
DY328_RS09440	COG0508	dehydrogenase complex catalyzes the overall conversion of
DY328_RS09440	COG0022	dehydrogenase e1 component
DY328_RS09445	COG0508	dehydrogenase complex catalyzes the overall conversion of
DY328_RS09455	COG0095	Lipoate-protein ligase
DY328_RS09460	COG3442	glutamine amidotransferase
DY328_RS09465	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
DY328_RS09470	COG1624	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
DY328_RS09495	COG0635	Involved in the biosynthesis of porphyrin-containing compound
DY328_RS09505	COG0647	UMP catabolic process
DY328_RS09515	COG3513	CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). In type II CRISPR systems correct processing of pre-crRNA requires a trans-encoded small RNA (tracrRNA), endogenous ribonuclease 3 (rnc) and this protein. The tracrRNA serves as a guide for ribonuclease 3-aided processing of pre-crRNA. Subsequently Cas9 crRNA tracrRNA endonucleolytically cleaves linear or circular dsDNA target complementary to the spacer
DY328_RS09520	COG1518	maintenance of DNA repeat elements
DY328_RS09525	COG3512	CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
DY328_RS09545	COG0481	GTPase activity
DY328_RS09555	COG5433	transposase activity
DY328_RS09565	COG1418	mRNA catabolic process
DY328_RS09570	COG0456	acetyltransferase
DY328_RS09580	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
DY328_RS09665	COG0791	NLP P60 protein
DY328_RS09665	COG0741	lytic transglycosylase activity
DY328_RS09695	COG2946	Replication initiation factor
DY328_RS09705	COG1674	ftsk spoiiie
DY328_RS09730	COG1131	(ABC) transporter
DY328_RS09735	COG1725	Transcriptional regulator
DY328_RS09745	COG0205	6-phosphofructokinase activity
DY328_RS09750	COG0469	pyruvate kinase activity
DY328_RS09770	COG5433	transposase activity
DY328_RS09775	COG2824	Alkylphosphonate utilization operon protein PhnA
DY328_RS09780	COG0765	amino acid transport
DY328_RS09785	COG1126	abc transporter atp-binding protein
DY328_RS09800	COG1072	(Pantothenic acid kinase))
DY328_RS09805	COG2813	Specifically methylates the guanine in position
DY328_RS09815	COG1744	ABC transporter substrate-binding protein PnrA-like
DY328_RS09820	COG3845	ABC transporter
DY328_RS09825	COG4603	Belongs to the binding-protein-dependent transport system permease family
DY328_RS09830	COG1079	Belongs to the binding-protein-dependent transport system permease family
DY328_RS09850	COG3764	Sortase (surface protein transpeptidase)
DY328_RS09855	COG0346	lactoylglutathione lyase activity
DY328_RS09880	COG2188	Transcriptional regulator
DY328_RS09895	COG1464	Belongs to the NlpA lipoprotein family
DY328_RS09910	COG1136	(ABC) transporter
DY328_RS09920	COG0745	RESPONSE REGULATOR receiver
DY328_RS09925	COG5002	protein histidine kinase activity
DY328_RS09930	COG4974	Belongs to the 'phage' integrase family
DY328_RS09935	COG4166	transmembrane transport
DY328_RS09950	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
DY328_RS09955	COG2739	Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
DY328_RS09960	COG5002	protein histidine kinase activity
DY328_RS09965	COG0745	RESPONSE REGULATOR receiver
DY328_RS09975	COG0704	Plays a role in the regulation of phosphate uptake
DY328_RS09980	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
DY328_RS09985	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
DY328_RS09990	COG0581	inorganic phosphate transmembrane transporter activity
DY328_RS09995	COG0573	inorganic phosphate transmembrane transporter activity
DY328_RS10005	COG3270	Specifically methylates the cytosine at position 1407 (m5C1407) of 16S rRNA
DY328_RS10005	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
DY328_RS10010	COG0483	inositol monophosphate 1-phosphatase activity
DY328_RS10025	COG0196	riboflavin kinase activity
DY328_RS10030	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
DY328_RS10060	COG1136	(ABC) transporter
DY328_RS10065	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
DY328_RS10070	COG0758	DNA mediated transformation
DY328_RS10075	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
DY328_RS10080	COG4604	ABC transporter, ATP-binding protein
DY328_RS10085	COG4605	iron ion homeostasis
DY328_RS10090	COG4606	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
DY328_RS10095	COG0110	maltose O-acetyltransferase activity
DY328_RS10105	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
DY328_RS10110	COG1376	ErfK ybiS ycfS ynhG family protein
DY328_RS10115	COG1966	Carbon starvation protein
DY328_RS10120	COG3279	Response regulator of the LytR AlgR family
DY328_RS10125	COG3275	phosphorelay sensor kinase activity
DY328_RS10180	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
DY328_RS10185	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
DY328_RS10200	COG0488	(ABC) transporter
DY328_RS10210	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
DY328_RS10225	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
DY328_RS10265	COG0095	Lipoate-protein ligase
DY328_RS10275	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
DY328_RS10280	COG4684	Psort location CytoplasmicMembrane, score
DY328_RS10285	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
DY328_RS10305	COG1132	(ABC) transporter
DY328_RS10335	COG2890	protein-(glutamine-N5) methyltransferase activity
DY328_RS10350	COG1942	4-Oxalocrotonate Tautomerase
DY328_RS10370	COG3976	FMN-binding domain protein
DY328_RS10370	COG0431	NADPH-dependent FMN reductase
DY328_RS10370	COG1053	succinate dehydrogenase
DY328_RS10380	COG2233	PERMEase
DY328_RS10395	COG0477	Major facilitator Superfamily
DY328_RS10410	COG4221	oxidoreductase activity
DY328_RS10415	COG0280	phosphate acetyltransferase
DY328_RS10420	COG0564	pseudouridine synthase activity
DY328_RS10430	COG2357	RelA SpoT domain protein
DY328_RS10445	COG1104	cysteine desulfurase activity
DY328_RS10465	COG0628	permease
DY328_RS10480	COG0561	phosphatase activity
DY328_RS10495	COG0038	chloride channel
DY328_RS10505	COG1177	transmembrane transport
DY328_RS10510	COG1176	ABC-type spermidine putrescine transport system, permease component I
DY328_RS10520	COG0812	UDP-N-acetylmuramate dehydrogenase activity
DY328_RS10525	COG5433	transposase activity
DY328_RS10530	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
DY328_RS10550	COG0285	dihydrofolate synthase activity
DY328_RS10555	COG2962	Rard protein
DY328_RS10570	COG0726	polysaccharide deacetylase
DY328_RS10575	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
DY328_RS10585	COG1012	belongs to the aldehyde dehydrogenase family
DY328_RS10685	COG1115	amino acid carrier protein
DY328_RS10690	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
DY328_RS10700	COG1346	cytolysis
DY328_RS10715	COG0539	negative regulation of cytoplasmic translation
DY328_RS10735	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
DY328_RS10745	COG0187	DNA topoisomerase II activity
DY328_RS10750	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
DY328_RS10755	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
DY328_RS10765	COG2755	lipolytic protein G-D-S-L family
DY328_RS10765	COG1083	cytidylyl-transferase
DY328_RS10780	COG2089	acid synthase
DY328_RS10795	COG1442	glycosyl transferase family 8
DY328_RS10795	COG1216	Glycosyl transferase, family 2
DY328_RS10800	COG1442	glycosyl transferase family 8
DY328_RS10800	COG1216	Glycosyl transferase, family 2
DY328_RS10815	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
DY328_RS10820	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
DY328_RS10840	COG1316	TRANSCRIPTIONal
DY328_RS10865	COG0005	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
DY328_RS10900	COG5433	transposase activity
DY328_RS10905	COG3842	ATPase activity
DY328_RS10920	COG1293	RNA-binding protein homologous to eukaryotic snRNP
DY328_RS10925	COG3527	Alpha-acetolactate decarboxylase
DY328_RS10930	COG0028	Belongs to the TPP enzyme family
DY328_RS10935	COG0457	Tetratricopeptide repeat
DY328_RS10940	COG0628	permease
DY328_RS10950	COG1051	belongs to the nudix hydrolase family
DY328_RS10960	COG5433	transposase activity
DY328_RS10970	COG1088	dTDP-glucose 4,6-dehydratase activity
DY328_RS10975	COG0135	phosphoribosylanthranilate isomerase activity
DY328_RS10985	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
DY328_RS10990	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
DY328_RS11000	COG2384	SAM-dependent methyltransferase
DY328_RS11020	COG5433	transposase activity
DY328_RS11035	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
DY328_RS11035	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
DY328_RS11040	COG0300	oxidoreductase activity
DY328_RS11055	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
DY328_RS11075	COG1523	belongs to the glycosyl hydrolase 13 family
DY328_RS11085	COG1573	uracil-dna glycosylase
DY328_RS11090	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
DY328_RS11115	COG0534	Mate efflux family protein
DY328_RS11160	COG0803	Belongs to the bacterial solute-binding protein 9 family
DY328_RS11165	COG5433	transposase activity
DY328_RS11185	COG2176	DNA-directed DNA polymerase activity
DY328_RS11195	COG4974	Belongs to the 'phage' integrase family
DY328_RS11205	COG1396	sequence-specific DNA binding
DY328_RS11210	COG3843	relaxase mobilization nuclease domain protein
DY328_RS11255	COG2217	Heavy metal translocating P-type atpase
DY328_RS11260	COG2217	Heavy metal translocating P-type atpase
DY328_RS11300	COG1388	LysM domain
DY328_RS11300	COG0860	N-Acetylmuramoyl-L-alanine amidase
DY328_RS11320	COG0640	Transcriptional regulator
DY328_RS11325	COG2217	Heavy metal translocating P-type atpase
DY328_RS11345	COG0842	Transport permease protein
DY328_RS11350	COG1131	(ABC) transporter
DY328_RS11360	COG0446	pyridine nucleotide-disulphide oxidoreductase
DY328_RS11525	COG0270	DNA (cytosine-5-)-methyltransferase activity
DY328_RS11610	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
DY328_RS11620	COG3425	synthase
DY328_RS11635	COG1272	protein, Hemolysin III