locus-tag	class	description
SCI_RS00010	COG0592	DNA-directed DNA polymerase activity
SCI_RS00025	COG0012	GTP binding
SCI_RS00030	COG0193	aminoacyl-tRNA hydrolase activity
SCI_RS00035	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
SCI_RS00040	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
SCI_RS00055	COG0037	tRNA processing
SCI_RS00060	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
SCI_RS00065	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
SCI_RS00185	COG1792	Involved in formation and maintenance of cell shape
SCI_RS00195	COG3942	CHAP domain
SCI_RS00200	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
SCI_RS00205	COG0436	Aminotransferase
SCI_RS00210	COG1381	Involved in DNA repair and RecF pathway recombination
SCI_RS00220	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
SCI_RS00225	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
SCI_RS00230	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
SCI_RS00245	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
SCI_RS00250	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
SCI_RS00260	COG0138	bifunctional purine biosynthesis protein purh
SCI_RS00265	COG3942	CHAP domain
SCI_RS00275	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
SCI_RS00300	COG1794	racemase activity, acting on amino acids and derivatives
SCI_RS00305	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
SCI_RS00310	COG2376	Dihydroxyacetone kinase
SCI_RS00320	COG2376	Dihydroxyacetone kinase
SCI_RS00325	COG1461	Dihydroxyacetone kinase
SCI_RS00330	COG3412	dihydroxyacetone kinase, phosphotransfer subunit
SCI_RS00335	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
SCI_RS00350	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
SCI_RS00360	COG3716	PTS system mannose fructose sorbose family IID component
SCI_RS00370	COG2222	sugar isomerase
SCI_RS00425	COG0791	NLP P60 protein
SCI_RS00425	COG0741	lytic transglycosylase activity
SCI_RS00455	COG2946	Replication initiation factor
SCI_RS00460	COG1674	ftsk spoiiie
SCI_RS00480	COG2746	aminoglycoside 3-N-acetyltransferase activity
SCI_RS00510	COG2255	four-way junction helicase activity
SCI_RS00520	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
SCI_RS00535	COG1012	belongs to the aldehyde dehydrogenase family
SCI_RS00535	COG1454	alcohol dehydrogenase
SCI_RS00545	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
SCI_RS00550	COG3010	Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P)
SCI_RS00560	COG1175	transmembrane transport
SCI_RS00565	COG0395	ABC-type sugar transport system, permease component
SCI_RS00580	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
SCI_RS00600	COG1269	ATP hydrolysis coupled proton transport
SCI_RS00605	COG0636	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
SCI_RS00615	COG1527	subunit (C
SCI_RS00625	COG1155	Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit
SCI_RS00630	COG1156	Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type beta chain is a regulatory subunit
SCI_RS00635	COG1394	ATPase activity, coupled to movement of substances
SCI_RS00680	COG1846	Transcriptional regulator
SCI_RS00685	COG1121	(ABC) transporter
SCI_RS00690	COG1108	ABC-type Mn2 Zn2 transport systems permease components
SCI_RS00695	COG3443	Belongs to the bacterial solute-binding protein 9 family
SCI_RS00695	COG0803	Belongs to the bacterial solute-binding protein 9 family
SCI_RS00715	COG0564	pseudouridine synthase activity
SCI_RS00720	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
SCI_RS00745	COG0052	Belongs to the universal ribosomal protein uS2 family
SCI_RS00750	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
SCI_RS00760	COG4463	regulation of RNA biosynthetic process
SCI_RS00775	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
SCI_RS00780	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
SCI_RS00810	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
SCI_RS00850	COG0166	Belongs to the GPI family
SCI_RS00855	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
SCI_RS00860	COG0594	ribonuclease P activity
SCI_RS00865	COG0706	membrane insertase activity
SCI_RS00995	COG3843	relaxase mobilization nuclease domain protein
SCI_RS01025	COG0230	Belongs to the bacterial ribosomal protein bL34 family
SCI_RS01030	COG0084	hydrolase, TatD family'
SCI_RS01060	COG1162	GTPase activity
SCI_RS01070	COG1564	THIamine pyrophosphokinase
SCI_RS01080	COG3481	metal-dependent phosphohydrolase, HD sub domain
SCI_RS01085	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
SCI_RS01095	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
SCI_RS01100	COG0049	tRNA binding
SCI_RS01105	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
SCI_RS01125	COG1214	PFAM Peptidase M22, glycoprotease
SCI_RS01150	COG1396	sequence-specific DNA binding
SCI_RS01165	COG0789	Transcriptional regulator
SCI_RS01170	COG2081	HI0933 family
SCI_RS01185	COG0584	glycerophosphoryl diester phosphodiesterase
SCI_RS01190	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
SCI_RS01195	COG2936	dipeptidyl-peptidase activity
SCI_RS01200	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
SCI_RS01215	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
SCI_RS01235	COG1304	FMN binding
SCI_RS01245	COG3425	synthase
SCI_RS01260	COG1882	Formate acetyltransferase
SCI_RS01270	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
SCI_RS01275	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
SCI_RS01280	COG0681	Belongs to the peptidase S26 family
SCI_RS01300	COG1193	negative regulation of DNA recombination
SCI_RS01310	COG3118	belongs to the thioredoxin family
SCI_RS01320	COG0668	transmembrane transport
SCI_RS01330	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
SCI_RS01335	COG0167	dihydroorotate dehydrogenase activity
SCI_RS01340	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
SCI_RS01340	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
SCI_RS01345	COG1940	carbohydrate kinase activity
SCI_RS01350	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
SCI_RS01360	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
SCI_RS01365	COG1447	Phosphotransferase system cellobiose-specific component IIA
SCI_RS01370	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
SCI_RS01370	COG2190	(PTS) system
SCI_RS01370	COG1263	PTS System
SCI_RS01395	COG0346	lactoylglutathione lyase activity
SCI_RS01405	COG0561	phosphatase activity
SCI_RS01420	COG3525	Glycosyl hydrolase, family 20, catalytic domain
SCI_RS01420	COG3064	Membrane
SCI_RS01420	COG3583	domain protein
SCI_RS01430	COG1876	peptidase activity
SCI_RS01435	COG0028	Belongs to the TPP enzyme family
SCI_RS01445	COG0366	Alpha amylase catalytic
SCI_RS01455	COG1122	ATPase activity
SCI_RS01465	COG1486	melibiose metabolic process
SCI_RS01470	COG1486	melibiose metabolic process
SCI_RS01510	COG0629	single-stranded DNA binding
SCI_RS01515	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
SCI_RS01530	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
SCI_RS01540	COG0006	proline dipeptidase activity
SCI_RS01545	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
SCI_RS01590	COG0527	aspartate kinase activity
SCI_RS01595	COG1024	Enoyl-CoA hydratase
SCI_RS01605	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
SCI_RS01615	COG2070	2-Nitropropane dioxygenase
SCI_RS01620	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
SCI_RS01625	COG1028	Short-chain dehydrogenase reductase Sdr
SCI_RS01630	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
SCI_RS01640	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
SCI_RS01645	COG0439	Biotin carboxylase
SCI_RS01650	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
SCI_RS01655	COG0825	malonyl-CoA metabolic process
SCI_RS01660	COG0586	Pfam SNARE associated Golgi protein
SCI_RS01675	COG3716	PTS system mannose fructose sorbose family IID component
SCI_RS01680	COG3715	PTS system
SCI_RS01690	COG1064	alcohol dehydrogenase
SCI_RS01695	COG0561	phosphatase activity
SCI_RS01705	COG2252	PERMEase
SCI_RS01710	COG0802	atpase or kinase
SCI_RS01720	COG1316	TRANSCRIPTIONal
SCI_RS01730	COG0537	adenosine 5'-monophosphoramidase activity
SCI_RS01735	COG1131	(ABC) transporter
SCI_RS01745	COG0510	thiamine kinase activity
SCI_RS01750	COG0220	tRNA (guanine-N7-)-methyltransferase activity
SCI_RS01760	COG0779	Required for maturation of 30S ribosomal subunits
SCI_RS01765	COG0195	Participates in both transcription termination and antitermination
SCI_RS01770	COG2740	Nucleic-acid-binding protein implicated in transcription termination
SCI_RS01785	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
SCI_RS01790	COG1283	sodium-dependent phosphate transmembrane transporter activity
SCI_RS01805	COG0656	L-ascorbic acid biosynthetic process
SCI_RS01825	COG0752	glycyl-tRNA synthetase alpha subunit
SCI_RS01830	COG0751	glycine-tRNA ligase activity
SCI_RS01845	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
SCI_RS01860	COG0275	rRNA processing
SCI_RS01870	COG0768	penicillin binding
SCI_RS01875	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
SCI_RS01890	COG0191	fructose-bisphosphate aldolase activity
SCI_RS01910	COG0227	Belongs to the bacterial ribosomal protein bL28 family
SCI_RS01920	COG1461	Dihydroxyacetone kinase
SCI_RS01940	COG2801	Transposase and inactivated derivatives
SCI_RS01980	COG1131	(ABC) transporter
SCI_RS02010	COG1126	abc transporter atp-binding protein
SCI_RS02015	COG0765	amino acid transport
SCI_RS02025	COG1968	undecaprenyl-diphosphatase activity
SCI_RS02030	COG4862	establishment of competence for transformation
SCI_RS02035	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
SCI_RS02045	COG0719	Fe-S assembly protein
SCI_RS02050	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
SCI_RS02060	COG1686	Belongs to the peptidase S11 family
SCI_RS02065	COG0513	Belongs to the DEAD box helicase family
SCI_RS02075	COG1126	abc transporter atp-binding protein
SCI_RS02085	COG0492	ferredoxin-NADP+ reductase activity
SCI_RS02090	COG1113	amino acid transport
SCI_RS02095	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
SCI_RS02100	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
SCI_RS02105	COG3579	cysteine-type endopeptidase activity
SCI_RS02110	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
SCI_RS02115	COG3331	DNA recombination
SCI_RS02120	COG4474	Belongs to the UPF0398 family
SCI_RS02125	COG3599	regulation of cell shape
SCI_RS02130	COG0116	Belongs to the methyltransferase superfamily
SCI_RS02140	COG0450	alkyl hydroperoxide reductase
SCI_RS02145	COG3634	alkyl hydroperoxide reductase activity
SCI_RS02155	COG1418	mRNA catabolic process
SCI_RS02160	COG0194	GDP metabolic process
SCI_RS02165	COG1758	RNA polymerase activity
SCI_RS02170	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
SCI_RS02175	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
SCI_RS02185	COG0631	protein serine/threonine phosphatase activity
SCI_RS02190	COG0515	serine threonine protein kinase
SCI_RS02190	COG2815	serine threonine protein kinase
SCI_RS02200	COG4585	Histidine kinase
SCI_RS02215	COG1185	polyribonucleotide nucleotidyltransferase activity
SCI_RS02225	COG3557	Belongs to the UPF0374 family
SCI_RS02230	COG2137	regulation of response to DNA damage stimulus
SCI_RS02235	COG3231	kanamycin kinase activity
SCI_RS02240	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
SCI_RS02245	COG2070	2-Nitropropane dioxygenase
SCI_RS02265	COG0519	Catalyzes the synthesis of GMP from XMP
SCI_RS02275	COG0525	valine-tRNA ligase activity
SCI_RS02315	COG1739	Uncharacterized protein family UPF0029
SCI_RS02320	COG4098	Superfamily II DNA RNA helicase required for DNA uptake (late competence protein)
SCI_RS02325	COG1040	competence protein
SCI_RS02335	COG0742	ribosomal rna small subunit methyltransferase
SCI_RS02340	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
SCI_RS02345	COG3480	Lon protease (S16) C-terminal proteolytic domain
SCI_RS02350	COG4470	Protein conserved in bacteria
SCI_RS02355	COG0820	rRNA (adenine-C2-)-methyltransferase activity
SCI_RS02365	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
SCI_RS02395	COG0534	Mate efflux family protein
SCI_RS02435	COG1217	gtp-binding protein TYPA
SCI_RS02445	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
SCI_RS02450	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
SCI_RS02455	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
SCI_RS02465	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
SCI_RS02470	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
SCI_RS02475	COG1799	cell septum assembly
SCI_RS02490	COG3599	regulation of cell shape
SCI_RS02495	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
SCI_RS02500	COG0628	permease
SCI_RS02510	COG1253	flavin adenine dinucleotide binding
SCI_RS02515	COG2188	Transcriptional regulator
SCI_RS02525	COG0366	Alpha amylase catalytic
SCI_RS02535	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
SCI_RS02540	COG1227	inorganic diphosphatase activity
SCI_RS02560	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
SCI_RS02565	COG2244	polysaccharide biosynthetic process
SCI_RS02570	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
SCI_RS02575	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
SCI_RS02580	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
SCI_RS02585	COG0740	serine-type endopeptidase activity
SCI_RS02600	COG0559	Belongs to the binding-protein-dependent transport system permease family
SCI_RS02620	COG0517	IMP dehydrogenase activity
SCI_RS02625	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
SCI_RS02630	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
SCI_RS02635	COG0470	DNA polymerase III
SCI_RS02640	COG4467	Involved in initiation control of chromosome replication
SCI_RS02650	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
SCI_RS02655	COG1393	Belongs to the ArsC family
SCI_RS02660	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
SCI_RS02665	COG0708	Exodeoxyribonuclease III
SCI_RS02680	COG0640	Transcriptional regulator
SCI_RS02705	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
SCI_RS02705	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
SCI_RS02715	COG0745	RESPONSE REGULATOR receiver
SCI_RS02730	COG1136	(ABC) transporter
SCI_RS02735	COG0577	efflux transmembrane transporter activity
SCI_RS02740	COG0531	amino acid
SCI_RS02770	COG1028	Short-chain dehydrogenase reductase Sdr
SCI_RS02790	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
SCI_RS02805	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
SCI_RS02815	COG0488	(ABC) transporter
SCI_RS02820	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
SCI_RS02830	COG1983	PspC domain protein
SCI_RS02835	COG1674	ftsk spoiiie
SCI_RS02835	COG0697	spore germination
SCI_RS02840	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
SCI_RS02855	COG0081	regulation of translation
SCI_RS02860	COG0528	UMP kinase activity
SCI_RS02865	COG0233	cytoplasmic translational termination
SCI_RS02870	COG2996	Protein conserved in bacteria
SCI_RS02885	COG0732	type I restriction modification DNA specificity domain
SCI_RS02890	COG0732	type I restriction modification DNA specificity domain
SCI_RS02900	COG1466	dna polymerase III delta subunit
SCI_RS02905	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
SCI_RS02915	COG2274	protein secretion by the type I secretion system
SCI_RS02920	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
SCI_RS02930	COG3290	protein histidine kinase activity
SCI_RS02995	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
SCI_RS03000	COG0549	Belongs to the carbamate kinase family
SCI_RS03005	COG1288	antiporter activity
SCI_RS03010	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
SCI_RS03015	COG1438	arginine binding
SCI_RS03020	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
SCI_RS03025	COG0363	glucosamine-6-phosphate deaminase activity
SCI_RS03040	COG2723	6-phospho-beta-galactosidase activity
SCI_RS03050	COG4095	Psort location CytoplasmicMembrane, score
SCI_RS03060	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
SCI_RS03060	COG3711	transcriptional antiterminator
SCI_RS03065	COG1447	Phosphotransferase system cellobiose-specific component IIA
SCI_RS03075	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
SCI_RS03090	COG4122	O-methyltransferase activity
SCI_RS03095	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
SCI_RS03110	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
SCI_RS03115	COG1132	(ABC) transporter
SCI_RS03125	COG1396	sequence-specific DNA binding
SCI_RS03135	COG2348	transferase activity, transferring amino-acyl groups
SCI_RS03145	COG1078	dGTPase activity
SCI_RS03170	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
SCI_RS03175	COG2884	Cell division ATP-binding protein ftsE
SCI_RS03180	COG2177	Part of the ABC transporter FtsEX involved in
SCI_RS03190	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
SCI_RS03190	COG1199	ATP-dependent helicase activity
SCI_RS03200	COG0772	Belongs to the SEDS family
SCI_RS03205	COG0693	protein deglycase activity
SCI_RS03215	COG0187	DNA topoisomerase II activity
SCI_RS03220	COG4477	modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
SCI_RS03225	COG2706	6-phosphogluconolactonase activity
SCI_RS03230	COG0745	RESPONSE REGULATOR receiver
SCI_RS03235	COG5002	protein histidine kinase activity
SCI_RS03235	COG3850	Histidine kinase
SCI_RS03240	COG0628	permease
SCI_RS03250	COG0028	Belongs to the TPP enzyme family
SCI_RS03255	COG3527	Alpha-acetolactate decarboxylase
SCI_RS03260	COG1293	RNA-binding protein homologous to eukaryotic snRNP
SCI_RS03275	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
SCI_RS03285	COG4443	Transcriptional Coactivator p15 (PC4)
SCI_RS03290	COG4152	abc transporter atp-binding protein
SCI_RS03295	COG1668	transmembrane transport
SCI_RS03300	COG3857	The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination
SCI_RS03305	COG1074	ATP-dependent DNA helicase activity
SCI_RS03310	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
SCI_RS03315	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
SCI_RS03320	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
SCI_RS03325	COG0297	glycogen (starch) synthase activity
SCI_RS03330	COG0058	SHG alpha-glucan phosphorylase activity
SCI_RS03345	COG0356	it plays a direct role in the translocation of protons across the membrane
SCI_RS03350	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
SCI_RS03355	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
SCI_RS03360	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
SCI_RS03365	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
SCI_RS03380	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
SCI_RS03400	COG1132	(ABC) transporter
SCI_RS03415	COG1380	Effector of murein hydrolase LrgA
SCI_RS03420	COG1346	cytolysis
SCI_RS03425	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
SCI_RS03435	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
SCI_RS03440	COG0492	ferredoxin-NADP+ reductase activity
SCI_RS03450	COG1349	DNA-binding transcription factor activity
SCI_RS03455	COG1105	Belongs to the carbohydrate kinase PfkB family
SCI_RS03460	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
SCI_RS03460	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
SCI_RS03460	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
SCI_RS03470	COG1307	EDD domain protein, DegV family
SCI_RS03475	COG0617	tRNA 3'-terminal CCA addition
SCI_RS03480	COG0488	(ABC) transporter
SCI_RS03495	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
SCI_RS03495	COG0072	phenylalanine-tRNA ligase activity
SCI_RS03510	COG1268	BioY protein
SCI_RS03520	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
SCI_RS03525	COG0577	efflux transmembrane transporter activity
SCI_RS03530	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
SCI_RS03535	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
SCI_RS03555	COG0300	oxidoreductase activity
SCI_RS03570	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
SCI_RS03570	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
SCI_RS03580	COG1131	(ABC) transporter
SCI_RS03585	COG1725	Transcriptional regulator
SCI_RS03595	COG0205	6-phosphofructokinase activity
SCI_RS03600	COG0469	pyruvate kinase activity
SCI_RS03610	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
SCI_RS03615	COG0210	DNA helicase
SCI_RS03635	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
SCI_RS03640	COG0196	riboflavin kinase activity
SCI_RS03645	COG1393	Belongs to the ArsC family
SCI_RS03650	COG4476	Belongs to the UPF0223 family
SCI_RS03655	COG0483	inositol monophosphate 1-phosphatase activity
SCI_RS03660	COG3270	Specifically methylates the cytosine at position 1407 (m5C1407) of 16S rRNA
SCI_RS03660	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
SCI_RS03670	COG0573	inorganic phosphate transmembrane transporter activity
SCI_RS03675	COG0581	inorganic phosphate transmembrane transporter activity
SCI_RS03680	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
SCI_RS03685	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
SCI_RS03690	COG0704	Plays a role in the regulation of phosphate uptake
SCI_RS03695	COG2003	Belongs to the UPF0758 family
SCI_RS03700	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
SCI_RS03715	COG1104	cysteine desulfurase activity
SCI_RS03720	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
SCI_RS03730	COG2357	RelA SpoT domain protein
SCI_RS03735	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
SCI_RS03740	COG0564	pseudouridine synthase activity
SCI_RS03745	COG0280	phosphate acetyltransferase
SCI_RS03750	COG1194	a g-specific adenine glycosylase
SCI_RS03760	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
SCI_RS03765	COG4684	Psort location CytoplasmicMembrane, score
SCI_RS03770	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
SCI_RS03780	COG2759	Belongs to the formate--tetrahydrofolate ligase family
SCI_RS03800	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
SCI_RS03815	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
SCI_RS03820	COG0222	ribosome binding
SCI_RS03825	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
SCI_RS03830	COG0336	Belongs to the RNA methyltransferase TrmD family
SCI_RS03835	COG3443	Belongs to the bacterial solute-binding protein 9 family
SCI_RS03835	COG0803	Belongs to the bacterial solute-binding protein 9 family
SCI_RS03850	COG1956	GAF domain-containing protein
SCI_RS03855	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
SCI_RS03865	COG0340	biotin-[acetyl-CoA-carboxylase] ligase activity
SCI_RS03865	COG1654	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon
SCI_RS03870	COG1609	Transcriptional regulator
SCI_RS03875	COG0153	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
SCI_RS03890	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
SCI_RS03900	COG0726	polysaccharide deacetylase
SCI_RS03910	COG0083	homoserine kinase activity
SCI_RS03930	COG2814	Major facilitator Superfamily
SCI_RS03945	COG0167	dihydroorotate dehydrogenase activity
SCI_RS03950	COG0284	orotidine-5'-phosphate decarboxylase activity
SCI_RS03960	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
SCI_RS03965	COG4479	Belongs to the UPF0346 family
SCI_RS03970	COG1702	phosphate starvation-inducible protein PhoH
SCI_RS03990	COG0686	Belongs to the AlaDH PNT family
SCI_RS04010	COG1132	(ABC) transporter
SCI_RS04015	COG1132	(ABC) transporter
SCI_RS04020	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
SCI_RS04025	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
SCI_RS04060	COG2184	nucleotidyltransferase activity
SCI_RS04120	COG3942	CHAP domain
SCI_RS04120	COG1388	LysM domain
SCI_RS04130	COG0629	single-stranded DNA binding
SCI_RS04165	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
SCI_RS04165	COG0551	DNA topoisomerase type I activity
SCI_RS04190	COG3843	relaxase mobilization nuclease domain protein
SCI_RS04205	COG0318	PFAM AMP-dependent synthetase and ligase
SCI_RS04210	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
SCI_RS04240	COG1215	transferase activity, transferring glycosyl groups
SCI_RS04245	COG1028	Short-chain dehydrogenase reductase Sdr
SCI_RS04255	COG1131	(ABC) transporter
SCI_RS04270	COG1396	sequence-specific DNA binding
SCI_RS04330	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
SCI_RS04335	COG0237	dephospho-CoA kinase activity
SCI_RS04340	COG2814	Major facilitator Superfamily
SCI_RS04350	COG0557	exoribonuclease II activity
SCI_RS04355	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
SCI_RS04365	COG0658	competence protein
SCI_RS04365	COG2333	competence protein COMEC
SCI_RS04380	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
SCI_RS04385	COG1051	belongs to the nudix hydrolase family
SCI_RS04390	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
SCI_RS04395	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
SCI_RS04400	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
SCI_RS04410	COG4109	DRTGG domain
SCI_RS04415	COG0024	Methionine aminopeptidase
SCI_RS04425	COG1846	Transcriptional regulator
SCI_RS04435	COG2246	polysaccharide biosynthetic process
SCI_RS04440	COG4708	membrane
SCI_RS04450	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
SCI_RS04455	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
SCI_RS04460	COG1597	lipid kinase activity
SCI_RS04465	COG1523	belongs to the glycosyl hydrolase 13 family
SCI_RS04470	COG0228	four-way junction DNA binding
SCI_RS04475	COG1837	Belongs to the UPF0109 family
SCI_RS04480	COG1827	regulation of RNA biosynthetic process
SCI_RS04495	COG3142	Participates in the control of copper homeostasis
SCI_RS04500	COG2315	Protein conserved in bacteria
SCI_RS04510	COG1132	(ABC) transporter
SCI_RS04515	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
SCI_RS04530	COG0828	Belongs to the bacterial ribosomal protein bS21 family
SCI_RS04535	COG1970	mechanosensitive ion channel activity
SCI_RS04540	COG0358	DNA primase activity
SCI_RS04545	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
SCI_RS04550	COG2151	metal-sulfur cluster biosynthetic enzyme
SCI_RS04560	COG0785	Cytochrome C biogenesis protein
SCI_RS04565	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
SCI_RS04570	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
SCI_RS04570	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
SCI_RS04575	COG2207	Transcriptional regulator
SCI_RS04575	COG4753	response regulator
SCI_RS04580	COG2972	Histidine kinase
SCI_RS04595	COG4555	ABC transporter
SCI_RS04610	COG0038	chloride channel
SCI_RS04620	COG0534	Mate efflux family protein
SCI_RS04625	COG1942	4-Oxalocrotonate Tautomerase
SCI_RS04630	COG1435	thymidine kinase activity
SCI_RS04635	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
SCI_RS04640	COG2890	protein-(glutamine-N5) methyltransferase activity
SCI_RS04645	COG0009	L-threonylcarbamoyladenylate synthase
SCI_RS04650	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
SCI_RS04660	COG0741	lytic transglycosylase activity
SCI_RS04725	COG2188	Transcriptional regulator
SCI_RS04735	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
SCI_RS04740	COG4974	Belongs to the 'phage' integrase family
SCI_RS04745	COG0095	Lipoate-protein ligase
SCI_RS04750	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
SCI_RS04755	COG0508	dehydrogenase complex catalyzes the overall conversion of
SCI_RS04760	COG0022	dehydrogenase e1 component
SCI_RS04765	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
SCI_RS04785	COG1206	Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
SCI_RS04790	COG0135	phosphoribosylanthranilate isomerase activity
SCI_RS04795	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
SCI_RS04800	COG0758	DNA mediated transformation
SCI_RS04805	COG0110	maltose O-acetyltransferase activity
SCI_RS04810	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
SCI_RS04815	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
SCI_RS04820	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
SCI_RS04835	COG0583	DNA-binding transcription factor activity
SCI_RS04840	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
SCI_RS04845	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
SCI_RS04850	COG1024	Enoyl-CoA hydratase
SCI_RS04855	COG0183	Belongs to the thiolase family
SCI_RS04860	COG1250	3-hydroxyacyl-CoA dehydrogenase
SCI_RS04865	COG1960	acyl-CoA dehydrogenase activity
SCI_RS04870	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
SCI_RS04875	COG3764	Sortase (surface protein transpeptidase)
SCI_RS04880	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
SCI_RS04885	COG0039	L-malate dehydrogenase activity
SCI_RS04900	COG0539	negative regulation of cytoplasmic translation
SCI_RS04925	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
SCI_RS04935	COG2184	nucleotidyltransferase activity
SCI_RS04950	COG0187	DNA topoisomerase II activity
SCI_RS04955	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
SCI_RS04965	COG2131	deaminase
SCI_RS04970	COG1309	transcriptional regulator
SCI_RS05015	COG2814	Major facilitator Superfamily
SCI_RS05020	COG0017	Asparaginyl-tRNA synthetase
SCI_RS05030	COG0436	Aminotransferase
SCI_RS05040	COG1846	Transcriptional regulator
SCI_RS05050	COG3022	response to hydroperoxide
SCI_RS05060	COG1272	protein, Hemolysin III
SCI_RS05065	COG1079	Belongs to the binding-protein-dependent transport system permease family
SCI_RS05070	COG4603	Belongs to the binding-protein-dependent transport system permease family
SCI_RS05075	COG3845	ABC transporter
SCI_RS05080	COG1744	ABC transporter substrate-binding protein PnrA-like
SCI_RS05085	COG0295	cytidine deaminase activity
SCI_RS05090	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
SCI_RS05100	COG2813	Specifically methylates the guanine in position
SCI_RS05105	COG1072	(Pantothenic acid kinase))
SCI_RS05130	COG5002	protein histidine kinase activity
SCI_RS05135	COG0745	RESPONSE REGULATOR receiver
SCI_RS05160	COG1940	carbohydrate kinase activity
SCI_RS05165	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
SCI_RS05170	COG0505	Belongs to the CarA family
SCI_RS05175	COG0540	Belongs to the ATCase OTCase family
SCI_RS05185	COG2065	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
SCI_RS05195	COG1481	regulation of sporulation
SCI_RS05200	COG0391	Required for morphogenesis under gluconeogenic growth conditions
SCI_RS05205	COG1660	Displays ATPase and GTPase activities
SCI_RS05225	COG0647	UMP catabolic process
SCI_RS05240	COG0635	Involved in the biosynthesis of porphyrin-containing compound
SCI_RS05250	COG0456	acetyltransferase
SCI_RS05255	COG0556	nucleotide-excision repair
SCI_RS05270	COG0488	(ABC) transporter
SCI_RS05275	COG1132	(ABC) transporter
SCI_RS05290	COG1388	LysM domain
SCI_RS05290	COG1705	Flagellar rod assembly protein muramidase FlgJ
SCI_RS05295	COG0218	Necessary for normal cell division and for the maintenance of normal septation
SCI_RS05300	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
SCI_RS05310	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
SCI_RS05320	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
SCI_RS05325	COG0038	chloride channel
SCI_RS05350	COG2824	Alkylphosphonate utilization operon protein PhnA
SCI_RS05355	COG0564	pseudouridine synthase activity
SCI_RS05365	COG0583	DNA-binding transcription factor activity
SCI_RS05375	COG1937	Protein conserved in bacteria
SCI_RS05385	COG1054	Belongs to the UPF0176 family
SCI_RS05390	COG0446	pyridine nucleotide-disulphide oxidoreductase
SCI_RS05395	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
SCI_RS05395	COG0425	Belongs to the sulfur carrier protein TusA family
SCI_RS05410	COG0211	Belongs to the bacterial ribosomal protein bL27 family
SCI_RS05425	COG0301	tRNA thio-modification
SCI_RS05430	COG1104	cysteine desulfurase activity
SCI_RS05435	COG3855	fructose 1,6-bisphosphate 1-phosphatase activity
SCI_RS05440	COG1806	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the
SCI_RS05445	COG0517	IMP dehydrogenase activity
SCI_RS05450	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
SCI_RS05450	COG0574	Belongs to the PEP-utilizing enzyme family
SCI_RS05465	COG1177	transmembrane transport
SCI_RS05470	COG1176	ABC-type spermidine putrescine transport system, permease component I
SCI_RS05475	COG3842	ATPase activity
SCI_RS05480	COG0812	UDP-N-acetylmuramate dehydrogenase activity
SCI_RS05490	COG0481	GTPase activity
SCI_RS05495	COG0561	phosphatase activity
SCI_RS05500	COG2195	Cleaves the N-terminal amino acid of tripeptides
SCI_RS05510	COG0572	uridine kinase
SCI_RS05515	COG0673	inositol 2-dehydrogenase activity
SCI_RS05520	COG0513	Belongs to the DEAD box helicase family
SCI_RS05525	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
SCI_RS05530	COG0291	Belongs to the bacterial ribosomal protein bL35 family
SCI_RS05540	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
SCI_RS05570	COG0560	Phosphoserine phosphatase
SCI_RS05575	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
SCI_RS05585	COG1624	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
SCI_RS05590	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
SCI_RS05595	COG3442	glutamine amidotransferase
SCI_RS05605	COG0488	(ABC) transporter
SCI_RS05630	COG0826	peptidase U32
SCI_RS05655	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
SCI_RS05660	COG1493	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
SCI_RS05675	COG3091	SprT-like family
SCI_RS05680	COG2183	response to ionizing radiation
SCI_RS05685	COG0701	Predicted permease
SCI_RS05690	COG3689	TIGRFAM TIGR03943 family protein
SCI_RS05695	COG0477	Major facilitator Superfamily
SCI_RS05700	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
SCI_RS05705	COG0552	protein localization to endoplasmic reticulum
SCI_RS05710	COG0561	phosphatase activity
SCI_RS05715	COG0561	phosphatase activity
SCI_RS05740	COG0860	N-Acetylmuramoyl-L-alanine amidase
SCI_RS05740	COG1388	LysM domain
SCI_RS05810	COG0740	serine-type endopeptidase activity
SCI_RS05815	COG4695	Portal protein
SCI_RS05840	COG0270	DNA (cytosine-5-)-methyltransferase activity
SCI_RS05905	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
SCI_RS05905	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
SCI_RS05960	COG1196	nuclear chromosome segregation
SCI_RS05965	COG0571	ribonuclease III activity
SCI_RS05970	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
SCI_RS05975	COG5002	protein histidine kinase activity
SCI_RS05980	COG0745	RESPONSE REGULATOR receiver
SCI_RS05990	COG0438	transferase activity, transferring glycosyl groups
SCI_RS06000	COG1609	Transcriptional regulator
SCI_RS06005	COG0006	proline dipeptidase activity
SCI_RS06010	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
SCI_RS06015	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
SCI_RS06020	COG1088	dTDP-glucose 4,6-dehydratase activity
SCI_RS06030	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
SCI_RS06035	COG0494	nUDIX hydrolase
SCI_RS06040	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
SCI_RS06050	COG2384	SAM-dependent methyltransferase
SCI_RS06065	COG3754	Rhamnan synthesis protein F
SCI_RS06095	COG1091	dTDP-4-dehydrorhamnose reductase activity
SCI_RS06100	COG0463	Glycosyl transferase, family 2
SCI_RS06125	COG0463	Glycosyl transferase, family 2
SCI_RS06175	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
SCI_RS06285	COG0740	serine-type endopeptidase activity
SCI_RS06295	COG0789	Transcriptional regulator
SCI_RS06300	COG1802	Transcriptional regulator
SCI_RS06300	COG4626	Terminase
SCI_RS06325	COG0270	DNA (cytosine-5-)-methyltransferase activity
SCI_RS06505	COG1404	Belongs to the peptidase S8 family
SCI_RS06510	COG0464	growth
SCI_RS06535	COG0551	DNA topoisomerase type I activity
SCI_RS06535	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
SCI_RS06560	COG3344	reverse transcriptase
SCI_RS06640	COG1132	(ABC) transporter
SCI_RS06645	COG1132	(ABC) transporter
SCI_RS06645	COG2375	cellular response to nickel ion
SCI_RS06650	COG1129	ABC transporter
SCI_RS06720	COG1484	DNA-dependent DNA replication
SCI_RS06735	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
SCI_RS06745	COG0077	Prephenate dehydratase
SCI_RS06755	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
SCI_RS06760	COG3679	Belongs to the UPF0342 family
SCI_RS06765	COG0287	Prephenate dehydrogenase
SCI_RS06775	COG0730	response to heat
SCI_RS06780	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
SCI_RS06785	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
SCI_RS06790	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
SCI_RS06795	COG0710	3-dehydroquinate dehydratase activity
SCI_RS06800	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
SCI_RS06805	COG1368	sulfuric ester hydrolase activity
SCI_RS06815	COG0813	purine-nucleoside phosphorylase activity
SCI_RS06825	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
SCI_RS06830	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
SCI_RS06855	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
SCI_RS06865	COG1191	sigma factor activity
SCI_RS06870	COG2352	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
SCI_RS06875	COG0772	Belongs to the SEDS family
SCI_RS06895	COG0406	alpha-ribazole phosphatase activity
SCI_RS06900	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
SCI_RS06930	COG1882	Formate acetyltransferase
SCI_RS06935	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
SCI_RS06945	COG1447	Phosphotransferase system cellobiose-specific component IIA
SCI_RS06955	COG1349	DNA-binding transcription factor activity
SCI_RS06960	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
SCI_RS06965	COG1959	2 iron, 2 sulfur cluster binding
SCI_RS06985	COG1309	transcriptional regulator
SCI_RS07005	COG0716	FMN binding
SCI_RS07010	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
SCI_RS07015	COG0254	rRNA binding
SCI_RS07030	COG1063	alcohol dehydrogenase
SCI_RS07035	COG1125	glycine betaine transport
SCI_RS07040	COG1732	Glycine betaine
SCI_RS07050	COG1573	uracil-dna glycosylase
SCI_RS07060	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
SCI_RS07075	COG0322	excinuclease ABC activity
SCI_RS07080	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
SCI_RS07090	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
SCI_RS07105	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
SCI_RS07120	COG1476	TRANSCRIPTIONal
SCI_RS07135	COG0204	Acyl-transferase
SCI_RS07140	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
SCI_RS07145	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
SCI_RS07150	COG2827	Endonuclease containing a URI domain
SCI_RS07160	COG1755	Isoprenylcysteine carboxyl methyltransferase
SCI_RS07165	COG2723	6-phospho-beta-galactosidase activity
SCI_RS07170	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
SCI_RS07170	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
SCI_RS07175	COG1447	Phosphotransferase system cellobiose-specific component IIA
SCI_RS07180	COG3711	transcriptional antiterminator
SCI_RS07185	COG3064	Membrane
SCI_RS07185	COG3525	Glycosyl hydrolase, family 20, catalytic domain
SCI_RS07185	COG3583	domain protein
SCI_RS07190	COG1105	Belongs to the carbohydrate kinase PfkB family
SCI_RS07195	COG3775	system Galactitol-specific IIC component
SCI_RS07215	COG0698	ribose 5-phosphate isomerase
SCI_RS07240	COG0513	Belongs to the DEAD box helicase family
SCI_RS07260	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
SCI_RS07290	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
SCI_RS07300	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
SCI_RS07305	COG0768	penicillin binding
SCI_RS07315	COG3620	sequence-specific DNA binding
SCI_RS07320	COG4679	PFAM Phage derived protein Gp49-like (DUF891)
SCI_RS07395	COG0588	phosphoglycerate mutase activity
SCI_RS07410	COG1307	EDD domain protein, DegV family
SCI_RS07415	COG4606	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
SCI_RS07420	COG4605	iron ion homeostasis
SCI_RS07425	COG4604	ABC transporter, ATP-binding protein
SCI_RS07435	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
SCI_RS07440	COG0497	DNA recombination
SCI_RS07445	COG1438	arginine binding
SCI_RS07450	COG1189	Ribosomal RNA methyltransferase RrmJ FtsJ
SCI_RS07460	COG1722	exodeoxyribonuclease VII activity
SCI_RS07465	COG1570	exodeoxyribonuclease VII activity
SCI_RS07470	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
SCI_RS07475	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
SCI_RS07480	COG0577	efflux transmembrane transporter activity
SCI_RS07485	COG1136	(ABC) transporter
SCI_RS07510	COG4703	Protein of unknown function (DUF1797)
SCI_RS07515	COG0542	response to heat
SCI_RS07530	COG2378	regulation of single-species biofilm formation
SCI_RS07550	COG2519	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
SCI_RS07555	COG1242	4 iron, 4 sulfur cluster binding
SCI_RS07565	COG0671	phosphoesterase, PA-phosphatase related
SCI_RS07570	COG3601	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
SCI_RS07595	COG1187	pseudouridine synthase activity
SCI_RS07605	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
SCI_RS07610	COG4974	Belongs to the 'phage' integrase family
SCI_RS07615	COG0517	IMP dehydrogenase activity
SCI_RS07625	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
SCI_RS07630	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
SCI_RS07650	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
SCI_RS07655	COG1254	Belongs to the acylphosphatase family
SCI_RS07675	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
SCI_RS07690	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
SCI_RS07700	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
SCI_RS07710	COG1160	GTP binding
SCI_RS07715	COG1484	DNA-dependent DNA replication
SCI_RS07725	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
SCI_RS07735	COG2190	(PTS) system
SCI_RS07735	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
SCI_RS07735	COG1263	PTS System
SCI_RS07740	COG0745	RESPONSE REGULATOR receiver
SCI_RS07745	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
SCI_RS07760	COG0501	Belongs to the peptidase M48B family
SCI_RS07765	COG1704	LemA family
SCI_RS07770	COG0357	Ribosomal RNA small subunit methyltransferase G
SCI_RS07775	COG1442	glycosyl transferase family 8
SCI_RS07780	COG4221	oxidoreductase activity
SCI_RS07790	COG1122	ATPase activity
SCI_RS07820	COG4720	Psort location CytoplasmicMembrane, score
SCI_RS07915	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
SCI_RS07920	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
SCI_RS07925	COG1464	Belongs to the NlpA lipoprotein family
SCI_RS07930	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
SCI_RS07940	COG1396	sequence-specific DNA binding
SCI_RS07945	COG0217	transcriptional regulatory protein
SCI_RS07950	COG1323	Belongs to the UPF0348 family
SCI_RS07960	COG2226	methyltransferase
SCI_RS07965	COG0799	negative regulation of ribosome biogenesis
SCI_RS07970	COG1713	HD superfamily hydrolase involved in NAD metabolism
SCI_RS07975	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
SCI_RS07980	COG1534	Rna-binding protein
SCI_RS07985	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
SCI_RS07990	COG2179	HAD superfamily (subfamily IIIA) phosphatase, TIGR01668
SCI_RS08005	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
SCI_RS08015	COG0154	amidase activity
SCI_RS08020	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
SCI_RS08025	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
SCI_RS08030	COG1335	isochorismatase
SCI_RS08035	COG4465	DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor
SCI_RS08040	COG0436	Aminotransferase
SCI_RS08045	COG0589	response to stress
SCI_RS08050	COG0561	phosphatase activity
SCI_RS08055	COG0252	asparaginase activity
SCI_RS08060	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
SCI_RS08065	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
SCI_RS08070	COG0736	holo-[acyl-carrier-protein] synthase activity
SCI_RS08075	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
SCI_RS08090	COG1482	cell wall glycoprotein biosynthetic process
SCI_RS08095	COG2188	Transcriptional regulator
SCI_RS08100	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
SCI_RS08105	COG2723	6-phospho-beta-galactosidase activity
SCI_RS08110	COG1447	Phosphotransferase system cellobiose-specific component IIA
SCI_RS08115	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
SCI_RS08120	COG1132	(ABC) transporter
SCI_RS08135	COG1902	pentaerythritol trinitrate reductase activity
SCI_RS08140	COG0242	peptide deformylase activity
SCI_RS08145	COG1940	carbohydrate kinase activity
SCI_RS08150	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
SCI_RS08150	COG2190	(PTS) system
SCI_RS08150	COG1263	PTS System
SCI_RS08155	COG1621	beta-fructofuranosidase activity
SCI_RS08160	COG1609	Transcriptional regulator
SCI_RS08170	COG4608	Belongs to the ABC transporter superfamily
SCI_RS08175	COG0444	Belongs to the ABC transporter superfamily
SCI_RS08180	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
SCI_RS08185	COG0601	transmembrane transport
SCI_RS08190	COG4166	transmembrane transport
SCI_RS08195	COG4166	transmembrane transport
SCI_RS08205	COG0504	CTP synthase activity
SCI_RS08210	COG3343	RNA polymerase activity
SCI_RS08220	COG0544	peptidyl-prolyl cis-trans isomerase activity
SCI_RS08225	COG4475	Protein of unknown function (DUF436)
SCI_RS08230	COG4720	Psort location CytoplasmicMembrane, score
SCI_RS08235	COG0351	phosphomethylpyrimidine kinase
SCI_RS08240	COG0101	tRNA pseudouridine synthase activity
SCI_RS08250	COG0484	heat shock protein binding
SCI_RS08255	COG0443	Heat shock 70 kDa protein
SCI_RS08260	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
SCI_RS08265	COG1420	regulation of RNA biosynthetic process
SCI_RS08270	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
SCI_RS08275	COG3037	sugar-specific permease SgaT UlaA
SCI_RS08285	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
SCI_RS08295	COG0588	phosphoglycerate mutase activity
SCI_RS08300	COG2848	UPF0210 protein
SCI_RS08305	COG3830	Belongs to the UPF0237 family
SCI_RS08310	COG1609	Transcriptional regulator
SCI_RS08325	COG3716	PTS system mannose fructose sorbose family IID component
SCI_RS08330	COG3715	PTS system
SCI_RS08335	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
SCI_RS08340	COG4225	unsaturated rhamnogalacturonyl hydrolase activity
SCI_RS08350	COG1028	Short-chain dehydrogenase reductase Sdr
SCI_RS08375	COG5492	domain, Protein
SCI_RS08380	COG0386	Belongs to the glutathione peroxidase family
SCI_RS08390	COG0281	malic enzyme
SCI_RS08400	COG0583	DNA-binding transcription factor activity
SCI_RS08405	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
SCI_RS08410	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
SCI_RS08425	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
SCI_RS08430	COG3842	ATPase activity
SCI_RS08440	COG1939	Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
SCI_RS08445	COG0215	cysteine-tRNA ligase activity
SCI_RS08450	COG1045	serine acetyltransferase
SCI_RS08455	COG1185	polyribonucleotide nucleotidyltransferase activity
SCI_RS08460	COG1164	Oligoendopeptidase f
SCI_RS08475	COG1187	pseudouridine synthase activity
SCI_RS08490	COG0242	peptide deformylase activity
SCI_RS08500	COG2176	DNA-directed DNA polymerase activity
SCI_RS08505	COG2503	HAD superfamily, subfamily IIIB (Acid phosphatase)
SCI_RS08510	COG1523	belongs to the glycosyl hydrolase 13 family
SCI_RS08530	COG3590	peptidase
SCI_RS08555	COG1490	D-aminoacyl-tRNA deacylase activity
SCI_RS08565	COG1385	rRNA (uridine-N3-)-methyltransferase activity
SCI_RS08570	COG2264	protein methyltransferase activity
SCI_RS08590	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
SCI_RS08610	COG1428	Deoxynucleoside kinase
SCI_RS08625	COG0459	protein refolding
SCI_RS08630	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
SCI_RS08640	COG3716	PTS system mannose fructose sorbose family IID component
SCI_RS08645	COG3715	PTS system
SCI_RS08665	COG2197	response regulator
SCI_RS08670	COG4585	Histidine kinase
SCI_RS08685	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
SCI_RS08690	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
SCI_RS08700	COG1363	Peptidase, m42
SCI_RS08710	COG0285	dihydrofolate synthase activity
SCI_RS08720	COG0442	prolyl-tRNA aminoacylation
SCI_RS08725	COG0750	zinc metalloprotease
SCI_RS08730	COG4589	Belongs to the CDS family
SCI_RS08735	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
SCI_RS08750	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
SCI_RS08770	COG3623	hexulose-6-phosphate isomerase
SCI_RS08780	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
SCI_RS08790	COG3037	sugar-specific permease SgaT UlaA
SCI_RS08805	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
SCI_RS08835	COG4537	Required for transformation and DNA binding
SCI_RS08840	COG1459	type II secretion system
SCI_RS08845	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
SCI_RS08855	COG0174	glutamine synthetase
SCI_RS08860	COG0789	Transcriptional regulator
SCI_RS08880	COG0126	phosphoglycerate kinase activity
SCI_RS08890	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
SCI_RS08895	COG0085	RNA polymerase activity
SCI_RS08900	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
SCI_RS08910	COG2226	methyltransferase
SCI_RS08920	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
SCI_RS08925	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
SCI_RS08935	COG0756	dUTP diphosphatase activity
SCI_RS08945	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
SCI_RS08950	COG1210	Utp--glucose-1-phosphate uridylyltransferase
SCI_RS08975	COG1674	ftsk spoiiie
SCI_RS09005	COG0582	viral genome integration into host DNA
SCI_RS09095	COG0203	ribosomal protein L17
SCI_RS09100	COG0202	RNA polymerase activity
SCI_RS09105	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
SCI_RS09110	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
SCI_RS09115	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
SCI_RS09120	COG0563	adenylate kinase activity
SCI_RS09125	COG0201	protein transport
SCI_RS09130	COG0200	Binds to the 23S rRNA
SCI_RS09135	COG1841	ribosomal large subunit assembly
SCI_RS09140	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
SCI_RS09150	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
SCI_RS09155	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
SCI_RS09160	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
SCI_RS09165	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
SCI_RS09170	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
SCI_RS09175	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
SCI_RS09185	COG0255	Belongs to the universal ribosomal protein uL29 family
SCI_RS09195	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
SCI_RS09200	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
SCI_RS09210	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
SCI_RS09215	COG0089	rRNA binding
SCI_RS09220	COG0088	Forms part of the polypeptide exit tunnel
SCI_RS09225	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
SCI_RS09230	COG0051	transcription antitermination factor activity, RNA binding
SCI_RS09245	COG0343	queuine tRNA-ribosyltransferase activity
SCI_RS09260	COG1832	CoA-binding protein
SCI_RS09265	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
SCI_RS09265	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
SCI_RS09285	COG5002	protein histidine kinase activity
SCI_RS09365	COG0602	queuosine metabolic process
SCI_RS09385	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
SCI_RS09405	COG0285	dihydrofolate synthase activity
SCI_RS09410	COG3906	Belongs to the UPF0473 family
SCI_RS09415	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
SCI_RS09420	COG4472	Bacterial protein of unknown function (DUF965)
SCI_RS09435	COG1393	Belongs to the ArsC family
SCI_RS09440	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
SCI_RS09445	COG1546	Belongs to the CinA family
SCI_RS09445	COG1058	Belongs to the CinA family
SCI_RS09450	COG1136	(ABC) transporter
SCI_RS09450	COG0577	efflux transmembrane transporter activity
SCI_RS09470	COG0519	Catalyzes the synthesis of GMP from XMP
SCI_RS09475	COG0632	four-way junction helicase activity
SCI_RS09480	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
SCI_RS09495	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
SCI_RS09500	COG1438	arginine binding
SCI_RS09505	COG0018	arginyl-trna synthetase
SCI_RS09510	COG1780	Probably involved in ribonucleotide reductase function
SCI_RS09520	COG0058	SHG alpha-glucan phosphorylase activity
SCI_RS09525	COG1640	4-alpha-glucanotransferase
SCI_RS09530	COG2182	Extracellular solute-binding protein
SCI_RS09535	COG1175	transmembrane transport
SCI_RS09540	COG3833	ABC-type maltose transport systems, permease component
SCI_RS09545	COG5521	maltodextrose utilization protein MalA
SCI_RS09550	COG1609	Transcriptional regulator
SCI_RS09555	COG1523	belongs to the glycosyl hydrolase 13 family
SCI_RS09560	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
SCI_RS09575	COG0124	histidyl-tRNA synthetase
SCI_RS09580	COG0333	Belongs to the bacterial ribosomal protein bL32 family
SCI_RS09585	COG0267	Belongs to the bacterial ribosomal protein bL33 family
SCI_RS09635	COG4974	Belongs to the 'phage' integrase family
SCI_RS09655	COG2807	transmembrane transport
SCI_RS09665	COG2094	Belongs to the DNA glycosylase MPG family
SCI_RS09675	COG0561	phosphatase activity
SCI_RS09680	COG3966	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
SCI_RS09685	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
SCI_RS09690	COG1696	Membrane protein involved in D-alanine export
SCI_RS09770	COG0561	phosphatase activity
SCI_RS09790	COG1011	Hydrolase
SCI_RS09800	COG0305	Participates in initiation and elongation during chromosome replication
SCI_RS09815	COG0445	tRNA wobble uridine modification
SCI_RS09820	COG0482	sulfurtransferase activity
SCI_RS09830	COG1760	l-serine dehydratase
SCI_RS09835	COG1760	l-serine dehydratase
SCI_RS09850	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
SCI_RS09855	COG1122	ATPase activity
SCI_RS09860	COG1122	ATPase activity
SCI_RS09865	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
SCI_RS09875	COG0612	Peptidase, M16
SCI_RS09880	COG0612	Peptidase, M16
SCI_RS09890	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
SCI_RS09895	COG0517	IMP dehydrogenase activity
SCI_RS09895	COG0516	GMP reductase activity
SCI_RS09900	COG0180	Tryptophanyl-tRNA synthetase
SCI_RS09905	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
SCI_RS09910	COG0149	triose-phosphate isomerase activity
SCI_RS09920	COG0488	(ABC) transporter
SCI_RS09960	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
SCI_RS09965	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
SCI_RS09970	COG1475	DNA binding
SCI_RS10025	COG2801	Transposase and inactivated derivatives