locus-tag	class	description
SCRE_RS00005	PF08299	Bacterial dnaA protein helix-turn-helix
SCRE_RS00005	PF00308	Bacterial dnaA  protein
SCRE_RS00010	PF02768	DNA polymerase III beta subunit, C-terminal domain
SCRE_RS00010	PF02767	DNA polymerase III beta subunit, central domain
SCRE_RS00010	PF00712	DNA polymerase III beta subunit, N-terminal domain
SCRE_RS00025	PF01926	50S ribosome-binding GTPase
SCRE_RS00025	PF06071	Protein of unknown function (DUF933)
SCRE_RS00030	PF01195	Peptidyl-tRNA hydrolase
SCRE_RS00035	PF02559	CarD-like/TRCF domain
SCRE_RS00035	PF03461	TRCF domain
SCRE_RS00035	PF00271	Helicase conserved C-terminal domain
SCRE_RS00035	PF17757	UvrB interaction domain
SCRE_RS00035	PF00270	DEAD/DEAH box helicase
SCRE_RS00040	PF01479	S4 domain
SCRE_RS00055	PF01171	PP-loop family
SCRE_RS00060	PF00156	Phosphoribosyl transferase domain
SCRE_RS00065	PF00004	ATPase family associated with various cellular activities (AAA)
SCRE_RS00065	PF01434	Peptidase family M41
SCRE_RS00065	PF06480	FtsH Extracellular
SCRE_RS00065	PF17862	AAA+ lid domain
SCRE_RS00185	PF04085	rod shape-determining protein MreC
SCRE_RS00195	PF01476	LysM domain
SCRE_RS00195	PF05257	CHAP domain
SCRE_RS00200	PF13793	N-terminal domain of ribose phosphate pyrophosphokinase
SCRE_RS00200	PF14572	Phosphoribosyl synthetase-associated domain
SCRE_RS00205	PF00155	Aminotransferase class I and II
SCRE_RS00210	PF02565	Recombination protein O C terminal
SCRE_RS00210	PF11967	Recombination protein O N terminal
SCRE_RS00215	PF02504	Fatty acid synthesis protein
SCRE_RS00220	PF00550	Phosphopantetheine attachment site
SCRE_RS00225	PF01259	SAICAR synthetase
SCRE_RS00230	PF18072	Formylglycinamide ribonucleotide amidotransferase linker domain
SCRE_RS00230	PF00586	AIR synthase related protein, N-terminal domain
SCRE_RS00230	PF02769	AIR synthase related protein, C-terminal domain
SCRE_RS00240	PF00156	Phosphoribosyl transferase domain
SCRE_RS00240	PF13537	Glutamine amidotransferase domain
SCRE_RS00245	PF02769	AIR synthase related protein, C-terminal domain
SCRE_RS00245	PF00586	AIR synthase related protein, N-terminal domain
SCRE_RS00250	PF00551	Formyl transferase
SCRE_RS00260	PF01808	AICARFT/IMPCHase bienzyme
SCRE_RS00260	PF02142	MGS-like domain
SCRE_RS00265	PF01476	LysM domain
SCRE_RS00265	PF05257	CHAP domain
SCRE_RS00270	PF02843	Phosphoribosylglycinamide synthetase, C domain
SCRE_RS00270	PF01071	Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain
SCRE_RS00270	PF02844	Phosphoribosylglycinamide synthetase, N domain
SCRE_RS00275	PF00731	AIR carboxylase
SCRE_RS00280	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
SCRE_RS00280	PF02222	ATP-grasp domain
SCRE_RS00280	PF17769	Phosphoribosylaminoimidazole carboxylase C-terminal domain
SCRE_RS00300	PF01177	Asp/Glu/Hydantoin racemase
SCRE_RS00305	PF10397	Adenylosuccinate lyase C-terminus
SCRE_RS00305	PF00206	Lyase
SCRE_RS00310	PF02733	Dak1 domain
SCRE_RS00320	PF02733	Dak1 domain
SCRE_RS00325	PF02734	DAK2 domain
SCRE_RS00330	PF03610	PTS system fructose IIA component
SCRE_RS00335	PF00230	Major intrinsic protein
SCRE_RS00340	PF00392	Bacterial regulatory proteins, gntR family
SCRE_RS00340	PF07702	UTRA domain
SCRE_RS00345	PF01301	Glycosyl hydrolases family 35
SCRE_RS00350	PF03830	PTS system sorbose subfamily IIB component
SCRE_RS00355	PF03609	PTS system sorbose-specific iic component
SCRE_RS00360	PF03613	PTS system mannose/fructose/sorbose family IID component
SCRE_RS00370	PF01380	SIS domain
SCRE_RS00375	PF01791	DeoC/LacD family aldolase
SCRE_RS00380	PF01263	Aldose 1-epimerase
SCRE_RS00390	PF02522	Aminoglycoside 3-N-acetyltransferase
SCRE_RS00410	PF00005	ABC transporter
SCRE_RS00420	PF05491	RuvB C-terminal winged helix domain
SCRE_RS00420	PF17864	RuvB AAA lid domain
SCRE_RS00420	PF05496	Holliday junction DNA helicase RuvB P-loop domain
SCRE_RS00430	PF01451	Low molecular weight phosphotyrosine protein phosphatase
SCRE_RS00440	PF01757	Acyltransferase family
SCRE_RS00445	PF00171	Aldehyde dehydrogenase family
SCRE_RS00445	PF00465	Iron-containing alcohol dehydrogenase 
SCRE_RS00455	PF13419	Haloacid dehalogenase-like hydrolase
SCRE_RS00460	PF04131	Putative N-acetylmannosamine-6-phosphate epimerase
SCRE_RS00470	PF00528	Binding-protein-dependent transport system inner membrane component
SCRE_RS00475	PF00528	Binding-protein-dependent transport system inner membrane component
SCRE_RS00490	PF00701	Dihydrodipicolinate synthetase family
SCRE_RS00495	PF00480	ROK family
SCRE_RS00510	PF01496	V-type ATPase 116kDa subunit family  
SCRE_RS00515	PF00137	ATP synthase subunit C
SCRE_RS00525	PF01992	ATP synthase (C/AC39) subunit
SCRE_RS00530	PF01990	ATP synthase (F/14-kDa) subunit
SCRE_RS00535	PF16886	ATPsynthase alpha/beta subunit N-term extension
SCRE_RS00535	PF02874	ATP synthase alpha/beta family, beta-barrel domain
SCRE_RS00535	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
SCRE_RS00540	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
SCRE_RS00540	PF02874	ATP synthase alpha/beta family, beta-barrel domain
SCRE_RS00545	PF01813	ATP synthase subunit D 
SCRE_RS00550	PF14821	Threonine synthase N terminus
SCRE_RS00550	PF00291	Pyridoxal-phosphate dependent enzyme
SCRE_RS00560	PF13419	Haloacid dehalogenase-like hydrolase
SCRE_RS00570	PF03109	ABC1 family
SCRE_RS00580	PF17210	SdrD B-like domain
SCRE_RS00580	PF10425	C-terminus of bacterial fibrinogen-binding adhesin
SCRE_RS00580	PF04650	YSIRK type signal peptide
SCRE_RS00580	PF17961	Bacterial Ig domain
SCRE_RS00580	PF00746	LPXTG cell wall anchor motif
SCRE_RS00590	PF01047	MarR family
SCRE_RS00595	PF00005	ABC transporter
SCRE_RS00600	PF00950	ABC 3 transport family
SCRE_RS00605	PF01297	Zinc-uptake complex component A periplasmic
SCRE_RS00605	PF09223	ZinT (YodA) periplasmic lipocalin-like zinc-recruitment
SCRE_RS00615	PF00403	Heavy-metal-associated domain
SCRE_RS00625	PF01479	S4 domain
SCRE_RS00625	PF00849	RNA pseudouridylate synthase
SCRE_RS00630	PF00912	Transglycosylase
SCRE_RS00630	PF00905	Penicillin binding protein transpeptidase domain
SCRE_RS00640	PF02357	Transcription termination factor nusG
SCRE_RS00640	PF00467	KOW motif
SCRE_RS00655	PF00318	Ribosomal protein S2
SCRE_RS00660	PF00889	Elongation factor TS
SCRE_RS00670	PF05848	CtsR N-terminal HTH domain
SCRE_RS00670	PF17727	CtsR C-terminal dimerization domain
SCRE_RS00675	PF02861	Clp amino terminal domain, pathogenicity island component
SCRE_RS00675	PF10431	C-terminal, D2-small domain, of ClpB protein 
SCRE_RS00675	PF17871	AAA lid domain
SCRE_RS00675	PF07724	AAA domain (Cdc48 subfamily)
SCRE_RS00675	PF00004	ATPase family associated with various cellular activities (AAA)
SCRE_RS00685	PF01207	Dihydrouridine synthase (Dus)
SCRE_RS00690	PF01430	Hsp33 protein
SCRE_RS00715	PF18419	ATP-grasp-like domain
SCRE_RS00715	PF02655	ATP-grasp domain
SCRE_RS00715	PF04262	Glutamate-cysteine ligase 
SCRE_RS00720	PF00709	Adenylosuccinate synthetase
SCRE_RS00735	PF14437	MafB19-like deaminase
SCRE_RS00760	PF00342	Phosphoglucose isomerase
SCRE_RS00765	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
SCRE_RS00765	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
SCRE_RS00770	PF00825	Ribonuclease P
SCRE_RS00775	PF02096	60Kd inner membrane protein
SCRE_RS00905	PF03432	Relaxase/Mobilisation nuclease domain 
SCRE_RS00915	PF00239	Resolvase, N terminal domain
SCRE_RS00915	PF02796	Helix-turn-helix domain of resolvase
SCRE_RS00935	PF00468	Ribosomal protein L34
SCRE_RS00940	PF01026	TatD related DNase
SCRE_RS00945	PF13331	Domain of unknown function (DUF4093)
SCRE_RS00955	PF00398	Ribosomal RNA adenine dimethylase
SCRE_RS00970	PF16745	RsgA N-terminal domain
SCRE_RS00970	PF03193	RsgA GTPase
SCRE_RS00975	PF00834	Ribulose-phosphate 3 epimerase family
SCRE_RS00980	PF04265	Thiamin pyrophosphokinase, vitamin B1 binding domain
SCRE_RS00980	PF04263	Thiamin pyrophosphokinase, catalytic domain
SCRE_RS00985	PF02646	RmuC family
SCRE_RS00990	PF01966	HD domain
SCRE_RS00990	PF01336	OB-fold nucleic acid binding domain
SCRE_RS00995	PF09182	Bacterial purine repressor, N-terminal
SCRE_RS00995	PF00156	Phosphoribosyl transferase domain
SCRE_RS01005	PF00164	Ribosomal protein S12/S23
SCRE_RS01010	PF00177	Ribosomal protein S7p/S5e
SCRE_RS01015	PF03144	Elongation factor Tu domain 2
SCRE_RS01015	PF14492	Elongation Factor G, domain II
SCRE_RS01015	PF00679	Elongation factor G C-terminus
SCRE_RS01015	PF00009	Elongation factor Tu GTP binding domain
SCRE_RS01015	PF03764	Elongation factor G, domain IV
SCRE_RS01020	PF00044	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
SCRE_RS01020	PF02800	Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
SCRE_RS01025	PF17770	Ribonuclease J C-terminal domain
SCRE_RS01025	PF07521	Zn-dependent metallo-hydrolase RNA specificity domain
SCRE_RS01025	PF00753	Metallo-beta-lactamase superfamily
SCRE_RS01030	PF07288	Protein of unknown function (DUF1447)
SCRE_RS01035	PF00814	Glycoprotease family
SCRE_RS01045	PF00814	Glycoprotease family
SCRE_RS01060	PF01381	Helix-turn-helix
SCRE_RS01075	PF07739	TipAS antibiotic-recognition domain
SCRE_RS01075	PF13411	MerR HTH family regulatory protein
SCRE_RS01085	PF08279	HTH domain
SCRE_RS01085	PF04394	Protein of unknown function, DUF536
SCRE_RS01095	PF03009	Glycerophosphoryl diester phosphodiesterase family
SCRE_RS01100	PF02575	YbaB/EbfC DNA-binding family
SCRE_RS01105	PF02129	X-Pro dipeptidyl-peptidase (S15 family)
SCRE_RS01105	PF09168	X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal
SCRE_RS01105	PF08530	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
SCRE_RS01110	PF00230	Major intrinsic protein
SCRE_RS01125	PF00144	Beta-lactamase
SCRE_RS01130	PF00288	GHMP kinases N terminal domain
SCRE_RS01130	PF08544	GHMP kinases C terminal 
SCRE_RS01130	PF10509	Galactokinase galactose-binding signature
SCRE_RS01140	PF00288	GHMP kinases N terminal domain
SCRE_RS01140	PF08544	GHMP kinases C terminal 
SCRE_RS01145	PF01070	FMN-dependent dehydrogenase
SCRE_RS01150	PF00368	Hydroxymethylglutaryl-coenzyme A reductase
SCRE_RS01155	PF01154	Hydroxymethylglutaryl-coenzyme A synthase N terminal
SCRE_RS01155	PF08540	Hydroxymethylglutaryl-coenzyme A synthase C terminal
SCRE_RS01170	PF01228	Glycine radical
SCRE_RS01170	PF02901	Pyruvate formate lyase-like
SCRE_RS01180	PF11799	impB/mucB/samB family C-terminal domain
SCRE_RS01180	PF00817	impB/mucB/samB family
SCRE_RS01185	PF14490	Helix-hairpin-helix containing domain
SCRE_RS01185	PF18335	ATP-dependent RecD-like DNA helicase SH3 domain
SCRE_RS01185	PF13538	UvrD-like helicase C-terminal domain
SCRE_RS01190	PF10502	Signal peptidase, peptidase S26 
SCRE_RS01195	PF01351	Ribonuclease HII
SCRE_RS01195	PF11858	Domain of unknown function (DUF3378)
SCRE_RS01210	PF01713	Smr domain
SCRE_RS01210	PF00488	MutS domain V
SCRE_RS01215	PF03577	Peptidase family C69
SCRE_RS01220	PF00085	Thioredoxin
SCRE_RS01235	PF00924	Mechanosensitive ion channel
SCRE_RS01245	PF02812	Glu/Leu/Phe/Val dehydrogenase, dimerisation domain
SCRE_RS01245	PF00208	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
SCRE_RS01250	PF01180	Dihydroorotate dehydrogenase
SCRE_RS01255	PF01625	Peptide methionine sulfoxide reductase
SCRE_RS01255	PF01641	SelR domain
SCRE_RS01260	PF01325	Iron dependent repressor, N-terminal DNA binding domain
SCRE_RS01260	PF00480	ROK family
SCRE_RS01265	PF02378	Phosphotransferase system, EIIC 
SCRE_RS01275	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
SCRE_RS01280	PF02255	PTS system, Lactose/Cellobiose specific IIA subunit
SCRE_RS01285	PF00367	phosphotransferase system, EIIB
SCRE_RS01285	PF02378	Phosphotransferase system, EIIC 
SCRE_RS01285	PF00358	phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
SCRE_RS01290	PF09587	Bacterial capsule synthesis protein PGA_cap
SCRE_RS01300	PF00072	Response regulator receiver domain
SCRE_RS01300	PF12833	Helix-turn-helix domain
SCRE_RS01305	PF00232	Glycosyl hydrolase family 1
SCRE_RS01310	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
SCRE_RS01335	PF04650	YSIRK type signal peptide
SCRE_RS01335	PF00728	Glycosyl hydrolase family 20, catalytic domain
SCRE_RS01335	PF07501	G5 domain
SCRE_RS01335	PF00746	LPXTG cell wall anchor motif
SCRE_RS01345	PF02557	D-alanyl-D-alanine carboxypeptidase
SCRE_RS01350	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
SCRE_RS01350	PF00205	Thiamine pyrophosphate enzyme, central domain
SCRE_RS01350	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
SCRE_RS01360	PF16657	Maltogenic Amylase, C-terminal domain
SCRE_RS01360	PF00128	Alpha amylase, catalytic domain
SCRE_RS01370	PF00005	ABC transporter
SCRE_RS01385	PF02056	Family 4 glycosyl hydrolase
SCRE_RS01385	PF11975	Family 4 glycosyl hydrolase C-terminal domain
SCRE_RS01395	PF00300	Histidine phosphatase superfamily (branch 1)
SCRE_RS01420	PF01250	Ribosomal protein S6
SCRE_RS01425	PF00436	Single-strand binding protein family
SCRE_RS01430	PF01084	Ribosomal protein S18
SCRE_RS01445	PF17760	UvrA interaction domain
SCRE_RS01445	PF17755	UvrA DNA-binding domain
SCRE_RS01445	PF00005	ABC transporter
SCRE_RS01455	PF01321	Creatinase/Prolidase N-terminal domain
SCRE_RS01455	PF00557	Metallopeptidase family M24
SCRE_RS01460	PF09285	Elongation factor P, C-terminal
SCRE_RS01460	PF08207	Elongation factor P (EF-P) KOW-like domain
SCRE_RS01460	PF01132	Elongation factor P (EF-P) OB domain
SCRE_RS01465	PF03780	Asp23 family, cell envelope-related function
SCRE_RS01470	PF01029	NusB family
SCRE_RS01505	PF00696	Amino acid kinase family
SCRE_RS01505	PF13840	ACT domain 
SCRE_RS01510	PF00378	Enoyl-CoA hydratase/isomerase
SCRE_RS01520	PF08545	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
SCRE_RS01520	PF08541	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal  
SCRE_RS01525	PF00550	Phosphopantetheine attachment site
SCRE_RS01530	PF03060	Nitronate monooxygenase
SCRE_RS01535	PF00698	Acyl transferase domain
SCRE_RS01545	PF00109	Beta-ketoacyl synthase, N-terminal domain
SCRE_RS01545	PF02801	Beta-ketoacyl synthase, C-terminal domain
SCRE_RS01550	PF00364	Biotin-requiring enzyme
SCRE_RS01555	PF07977	FabA-like domain
SCRE_RS01560	PF00289	Biotin carboxylase, N-terminal domain
SCRE_RS01560	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
SCRE_RS01560	PF02785	Biotin carboxylase C-terminal domain
SCRE_RS01565	PF01039	Carboxyl transferase domain
SCRE_RS01565	PF17848	Acetyl-coA carboxylase zinc finger domain
SCRE_RS01570	PF03255	Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit
SCRE_RS01575	PF09335	SNARE associated Golgi protein
SCRE_RS01580	PF02403	Seryl-tRNA synthetase N-terminal domain
SCRE_RS01580	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
SCRE_RS01590	PF03613	PTS system mannose/fructose/sorbose family IID component
SCRE_RS01595	PF03609	PTS system sorbose-specific iic component
SCRE_RS01600	PF03830	PTS system sorbose subfamily IIB component
SCRE_RS01600	PF03610	PTS system fructose IIA component
SCRE_RS01605	PF08240	Alcohol dehydrogenase GroES-like domain
SCRE_RS01605	PF00107	Zinc-binding dehydrogenase
SCRE_RS01620	PF00860	Permease family
SCRE_RS01625	PF02367	Threonylcarbamoyl adenosine biosynthesis protein TsaE
SCRE_RS01635	PF03816	Cell envelope-related transcriptional attenuator domain
SCRE_RS01645	PF01230	HIT domain
SCRE_RS01650	PF00005	ABC transporter
SCRE_RS01660	PF01636	Phosphotransferase enzyme family
SCRE_RS01665	PF02390	Putative methyltransferase 
SCRE_RS01675	PF02576	RimP N-terminal domain
SCRE_RS01675	PF17384	RimP C-terminal SH3 domain
SCRE_RS01680	PF00575	S1 RNA binding domain
SCRE_RS01680	PF08529	NusA N-terminal domain
SCRE_RS01680	PF13184	NusA-like KH domain
SCRE_RS01685	PF04296	Protein of unknown function (DUF448)
SCRE_RS01690	PF01248	Ribosomal protein L7Ae/L30e/S12e/Gadd45 family
SCRE_RS01695	PF04760	Translation initiation factor IF-2, N-terminal region
SCRE_RS01695	PF11987	Translation-initiation factor 2
SCRE_RS01695	PF00009	Elongation factor Tu GTP binding domain
SCRE_RS01700	PF02033	Ribosome-binding factor A
SCRE_RS01705	PF02690	Na+/Pi-cotransporter
SCRE_RS01715	PF01979	Amidohydrolase family
SCRE_RS01720	PF00248	Aldo/keto reductase family
SCRE_RS01740	PF02091	Glycyl-tRNA synthetase alpha subunit
SCRE_RS01745	PF05746	DALR anticodon binding domain
SCRE_RS01745	PF02092	Glycyl-tRNA synthetase beta subunit
SCRE_RS01750	PF05979	Bacterial protein of unknown function (DUF896)
SCRE_RS01760	PF02386	Cation transport protein
SCRE_RS01775	PF01795	MraW methylase family
SCRE_RS01785	PF00905	Penicillin binding protein transpeptidase domain
SCRE_RS01785	PF03793	PASTA domain
SCRE_RS01785	PF03717	Penicillin-binding Protein dimerisation domain
SCRE_RS01790	PF00953	Glycosyl transferase family 4
SCRE_RS01790	PF10555	Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 
SCRE_RS01805	PF01116	Fructose-bisphosphate aldolase class-II
SCRE_RS01825	PF00830	Ribosomal L28 family
SCRE_RS01830	PF03780	Asp23 family, cell envelope-related function
SCRE_RS01835	PF02734	DAK2 domain
SCRE_RS01835	PF13684	Dihydroxyacetone kinase family
SCRE_RS01855	PF13333	Integrase core domain
SCRE_RS01855	PF00665	Integrase core domain
SCRE_RS01855	PF13276	HTH-like domain
SCRE_RS01860	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SCRE_RS01860	PF05384	Sensor protein DegS
SCRE_RS01860	PF07730	Histidine kinase
SCRE_RS01895	PF00005	ABC transporter
SCRE_RS01925	PF00005	ABC transporter
SCRE_RS01930	PF00528	Binding-protein-dependent transport system inner membrane component
SCRE_RS01940	PF02673	Bacitracin resistance protein BacA
SCRE_RS01945	PF05389	Negative regulator of genetic competence (MecA)
SCRE_RS01950	PF00953	Glycosyl transferase family 4
SCRE_RS01955	PF00005	ABC transporter
SCRE_RS01960	PF01458	Uncharacterized protein family (UPF0051)
SCRE_RS01965	PF00266	Aminotransferase class-V
SCRE_RS01970	PF01592	NifU-like N terminal domain
SCRE_RS01975	PF00768	D-alanyl-D-alanine carboxypeptidase
SCRE_RS01975	PF07943	Penicillin-binding protein 5, C-terminal domain
SCRE_RS01980	PF00270	DEAD/DEAH box helicase
SCRE_RS01980	PF00271	Helicase conserved C-terminal domain
SCRE_RS01985	PF00528	Binding-protein-dependent transport system inner membrane component
SCRE_RS01990	PF00005	ABC transporter
SCRE_RS02000	PF07992	Pyridine nucleotide-disulphide oxidoreductase
SCRE_RS02005	PF00324	Amino acid permease
SCRE_RS02010	PF04095	Nicotinate phosphoribosyltransferase (NAPRTase) family
SCRE_RS02010	PF17956	Nicotinate phosphoribosyltransferase C-terminal domain
SCRE_RS02010	PF17767	Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain
SCRE_RS02015	PF02540	NAD synthase
SCRE_RS02020	PF03051	Peptidase C1-like family
SCRE_RS02025	PF00912	Transglycosylase
SCRE_RS02025	PF00905	Penicillin binding protein transpeptidase domain
SCRE_RS02030	PF03838	Recombination protein U
SCRE_RS02035	PF06908	YspA SLOG family
SCRE_RS02040	PF05103	DivIVA protein
SCRE_RS02045	PF02926	THUMP domain
SCRE_RS02045	PF01170	Putative RNA methylase family UPF0020
SCRE_RS02050	PF18708	MapZ extracellular C-terminal domain 2
SCRE_RS02050	PF18041	MapZ extracellular domain 1
SCRE_RS02055	PF00578	AhpC/TSA family
SCRE_RS02060	PF07992	Pyridine nucleotide-disulphide oxidoreductase
SCRE_RS02060	PF13192	Thioredoxin domain
SCRE_RS02065	PF02664	S-Ribosylhomocysteinase (LuxS)
SCRE_RS02070	PF01966	HD domain
SCRE_RS02070	PF00013	KH domain
SCRE_RS02070	PF12072	Domain of unknown function (DUF3552)
SCRE_RS02075	PF00625	Guanylate kinase
SCRE_RS02080	PF01192	RNA polymerase Rpb6 
SCRE_RS02085	PF17764	3′ DNA-binding domain (3′BD)
SCRE_RS02085	PF18074	Primosomal protein N C-terminal domain
SCRE_RS02085	PF00271	Helicase conserved C-terminal domain
SCRE_RS02085	PF04851	Type III restriction enzyme, res subunit
SCRE_RS02085	PF18319	PriA DNA helicase Cys-rich region (CRR) domain
SCRE_RS02090	PF00551	Formyl transferase
SCRE_RS02090	PF02911	Formyl transferase, C-terminal domain
SCRE_RS02105	PF03793	PASTA domain
SCRE_RS02105	PF00069	Protein kinase domain
SCRE_RS02115	PF00672	HAMP domain
SCRE_RS02115	PF07730	Histidine kinase
SCRE_RS02115	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SCRE_RS02120	PF00072	Response regulator receiver domain
SCRE_RS02120	PF00196	Bacterial regulatory proteins, luxR family
SCRE_RS02125	PF00160	Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
SCRE_RS02130	PF01138	3' exoribonuclease family, domain 1
SCRE_RS02130	PF03725	3' exoribonuclease family, domain 2
SCRE_RS02130	PF00575	S1 RNA binding domain
SCRE_RS02130	PF00013	KH domain
SCRE_RS02130	PF03726	Polyribonucleotide nucleotidyltransferase, RNA binding domain
SCRE_RS02140	PF04167	Protein of unknown function (DUF402)
SCRE_RS02145	PF02631	RecX family
SCRE_RS02150	PF01636	Phosphotransferase enzyme family
SCRE_RS02155	PF01938	TRAM domain
SCRE_RS02155	PF05958	tRNA (Uracil-5-)-methyltransferase
SCRE_RS02160	PF03060	Nitronate monooxygenase
SCRE_RS02180	PF03352	Methyladenine glycosylase
SCRE_RS02180	PF13302	Acetyltransferase (GNAT) domain
SCRE_RS02180	PF13673	Acetyltransferase (GNAT) domain
SCRE_RS02180	PF00117	Glutamine amidotransferase class-I
SCRE_RS02180	PF00958	GMP synthase C terminal domain
SCRE_RS02190	PF00133	tRNA synthetases class I (I, L, M and V)
SCRE_RS02190	PF08264	Anticodon-binding domain of tRNA
SCRE_RS02190	PF10458	Valyl tRNA synthetase tRNA binding arm
SCRE_RS02205	PF01378	B domain
SCRE_RS02205	PF01378	B domain
SCRE_RS02205	PF17573	GA-like domain
SCRE_RS02205	PF00746	LPXTG cell wall anchor motif
SCRE_RS02205	PF00746	LPXTG cell wall anchor motif
SCRE_RS02205	PF17573	GA-like domain
SCRE_RS02205	PF17573	GA-like domain
SCRE_RS02205	PF01378	B domain
SCRE_RS02205	PF00746	LPXTG cell wall anchor motif
SCRE_RS02220	PF00291	Pyridoxal-phosphate dependent enzyme
SCRE_RS02225	PF09186	Domain of unknown function (DUF1949)
SCRE_RS02225	PF01205	Uncharacterized protein family UPF0029
SCRE_RS02230	PF04851	Type III restriction enzyme, res subunit
SCRE_RS02230	PF00271	Helicase conserved C-terminal domain
SCRE_RS02240	PF02482	Sigma 54 modulation protein / S30EA ribosomal protein
SCRE_RS02240	PF16321	Sigma 54 modulation/S30EA ribosomal protein C terminus
SCRE_RS02250	PF01467	Cytidylyltransferase-like
SCRE_RS02255	PF05362	Lon protease (S16) C-terminal proteolytic domain
SCRE_RS02255	PF13180	PDZ domain
SCRE_RS02260	PF06265	Protein of unknown function (DUF1027)
SCRE_RS02265	PF04055	Radical SAM superfamily
SCRE_RS02275	PF01478	Type IV leader peptidase family
SCRE_RS02275	PF06750	Bacterial Peptidase A24 N-terminal domain
SCRE_RS02280	PF00210	Ferritin-like domain
SCRE_RS02285	PF00589	Phage integrase family
SCRE_RS02285	PF02920	DNA binding domain of tn916 integrase
SCRE_RS02290	PF09035	Excisionase from transposon Tn916
SCRE_RS02305	PF01554	MatE
SCRE_RS02335	PF00581	Rhodanese-like domain
SCRE_RS02345	PF00009	Elongation factor Tu GTP binding domain
SCRE_RS02345	PF00679	Elongation factor G C-terminus
SCRE_RS02345	PF14492	Elongation Factor G, domain II
SCRE_RS02345	PF03144	Elongation factor Tu domain 2
SCRE_RS02355	PF08245	Mur ligase middle domain
SCRE_RS02355	PF02875	Mur ligase family, glutamate ligase domain
SCRE_RS02360	PF03033	Glycosyltransferase family 28 N-terminal domain
SCRE_RS02360	PF04101	Glycosyltransferase family 28 C-terminal domain
SCRE_RS02365	PF08478	POTRA domain, FtsQ-type
SCRE_RS02365	PF03799	Cell division protein FtsQ
SCRE_RS02370	PF02491	SHS2 domain inserted in FTSA
SCRE_RS02370	PF11983	Membrane-attachment and polymerisation-promoting switch
SCRE_RS02375	PF12327	FtsZ family, C-terminal domain
SCRE_RS02375	PF00091	Tubulin/FtsZ family, GTPase domain
SCRE_RS02380	PF01168	Alanine racemase, N-terminal domain
SCRE_RS02385	PF04472	Cell division protein SepF
SCRE_RS02400	PF05103	DivIVA protein
SCRE_RS02405	PF08264	Anticodon-binding domain of tRNA
SCRE_RS02405	PF00133	tRNA synthetases class I (I, L, M and V)
SCRE_RS02410	PF01594	AI-2E family transporter
SCRE_RS02415	PF01293	Phosphoenolpyruvate carboxykinase
SCRE_RS02420	PF00571	CBS domain
SCRE_RS02420	PF03471	Transporter associated domain
SCRE_RS02420	PF01595	Cyclin M transmembrane N-terminal domain
SCRE_RS02425	PF07702	UTRA domain
SCRE_RS02425	PF00392	Bacterial regulatory proteins, gntR family
SCRE_RS02435	PF16657	Maltogenic Amylase, C-terminal domain
SCRE_RS02435	PF00128	Alpha amylase, catalytic domain
SCRE_RS02445	PF04055	Radical SAM superfamily
SCRE_RS02450	PF01368	DHH family
SCRE_RS02450	PF02833	DHHA2 domain
SCRE_RS02470	PF08245	Mur ligase middle domain
SCRE_RS02470	PF02875	Mur ligase family, glutamate ligase domain
SCRE_RS02475	PF14667	Polysaccharide biosynthesis C-terminal domain
SCRE_RS02475	PF01943	Polysaccharide biosynthesis protein
SCRE_RS02480	PF00155	Aminotransferase class I and II
SCRE_RS02485	PF00689	Cation transporting ATPase, C-terminus
SCRE_RS02485	PF00690	Cation transporter/ATPase, N-terminus
SCRE_RS02495	PF00574	Clp protease
SCRE_RS02500	PF09902	Uncharacterized protein conserved in bacteria (DUF2129)
SCRE_RS02505	PF13458	Periplasmic binding protein
SCRE_RS02510	PF02653	Branched-chain amino acid transport system / permease component
SCRE_RS02515	PF11862	Domain of unknown function (DUF3382)
SCRE_RS02515	PF02653	Branched-chain amino acid transport system / permease component
SCRE_RS02520	PF00005	ABC transporter
SCRE_RS02520	PF12399	Branched-chain amino acid ATP-binding cassette transporter
SCRE_RS02525	PF00005	ABC transporter
SCRE_RS02530	PF00571	CBS domain
SCRE_RS02535	PF10035	Uncharacterized protein conserved in bacteria (DUF2179)
SCRE_RS02535	PF02588	Uncharacterised 5xTM membrane BCR, YitT family COG1284
SCRE_RS02540	PF02223	Thymidylate kinase
SCRE_RS02545	PF09115	DNA polymerase III, delta subunit, C terminal
SCRE_RS02550	PF06156	Initiation control protein YabA
SCRE_RS02555	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
SCRE_RS02560	PF02870	6-O-methylguanine DNA methyltransferase, ribonuclease-like domain
SCRE_RS02560	PF01035	6-O-methylguanine DNA methyltransferase, DNA binding domain
SCRE_RS02565	PF03960	ArsC family
SCRE_RS02570	PF00730	HhH-GPD superfamily base excision DNA repair protein
SCRE_RS02570	PF00633	Helix-hairpin-helix motif
SCRE_RS02570	PF10576	Iron-sulfur binding domain of endonuclease III
SCRE_RS02575	PF03372	Endonuclease/Exonuclease/phosphatase family
SCRE_RS02590	PF01022	Bacterial regulatory protein, arsR family
SCRE_RS02620	PF09334	tRNA synthetases class I (M)
SCRE_RS02620	PF01588	Putative tRNA binding domain
SCRE_RS02630	PF00486	Transcriptional regulatory protein, C terminal
SCRE_RS02630	PF00072	Response regulator receiver domain
SCRE_RS02635	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SCRE_RS02645	PF00005	ABC transporter
SCRE_RS02655	PF13520	Amino acid permease
SCRE_RS02675	PF00313	'Cold-shock' DNA-binding domain
SCRE_RS02705	PF12804	MobA-like NTP transferase domain
SCRE_RS02705	PF14602	Hexapeptide repeat of succinyl-transferase
SCRE_RS02705	PF00132	Bacterial transferase hexapeptide (six repeats)
SCRE_RS02710	PF00293	NUDIX domain
SCRE_RS02720	PF01048	Phosphorylase superfamily
SCRE_RS02730	PF00005	ABC transporter
SCRE_RS02730	PF12848	ABC transporter
SCRE_RS02735	PF00160	Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
SCRE_RS02745	PF04024	PspC domain
SCRE_RS02750	PF01580	FtsK/SpoIIIE family
SCRE_RS02750	PF09397	Ftsk gamma domain
SCRE_RS02750	PF17854	FtsK alpha domain
SCRE_RS02765	PF03946	Ribosomal protein L11, N-terminal domain
SCRE_RS02765	PF00298	Ribosomal protein L11, RNA binding domain
SCRE_RS02770	PF00687	Ribosomal protein L1p/L10e family
SCRE_RS02775	PF00696	Amino acid kinase family
SCRE_RS02780	PF01765	Ribosome recycling factor
SCRE_RS02785	PF17783	CvfB-like winged helix domain
SCRE_RS02785	PF13509	S1 domain
SCRE_RS02790	PF02384	N-6 DNA Methylase
SCRE_RS02790	PF12161	HsdM N-terminal domain
SCRE_RS02800	PF01420	Type I restriction modification DNA specificity domain
SCRE_RS02805	PF01420	Type I restriction modification DNA specificity domain
SCRE_RS02810	PF12008	Type I restriction and modification enzyme - subunit R C terminal
SCRE_RS02810	PF18766	SWI2/SNF2 ATPase
SCRE_RS02810	PF04313	Type I restriction enzyme R protein N terminus (HSDR_N)
SCRE_RS02815	PF06144	DNA polymerase III, delta subunit
SCRE_RS02820	PF00081	Iron/manganese superoxide dismutases, alpha-hairpin domain
SCRE_RS02820	PF02777	Iron/manganese superoxide dismutases, C-terminal domain
SCRE_RS02830	PF00664	ABC transporter transmembrane region
SCRE_RS02830	PF03412	Peptidase C39 family
SCRE_RS02830	PF00005	ABC transporter
SCRE_RS02845	PF17203	Single cache domain 3
SCRE_RS02845	PF14689	Sensor_kinase_SpoOB-type, alpha-helical domain
SCRE_RS02845	PF00989	PAS fold
SCRE_RS02845	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SCRE_RS02910	PF00185	Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
SCRE_RS02910	PF02729	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
SCRE_RS02915	PF00696	Amino acid kinase family
SCRE_RS02920	PF03606	C4-dicarboxylate anaerobic carrier
SCRE_RS02925	PF01546	Peptidase family M20/M25/M40
SCRE_RS02930	PF02863	Arginine repressor, C-terminal domain
SCRE_RS02930	PF01316	Arginine repressor, DNA binding domain
SCRE_RS02935	PF02547	Queuosine biosynthesis protein
SCRE_RS02940	PF01182	Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase
SCRE_RS02945	PF07943	Penicillin-binding protein 5, C-terminal domain
SCRE_RS02945	PF00768	D-alanyl-D-alanine carboxypeptidase
SCRE_RS02955	PF00232	Glycosyl hydrolase family 1
SCRE_RS02965	PF04193	PQ loop repeat 
SCRE_RS02970	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
SCRE_RS02975	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
SCRE_RS02975	PF00874	PRD domain
SCRE_RS02975	PF05043	Mga helix-turn-helix domain
SCRE_RS02975	PF08279	HTH domain
SCRE_RS02980	PF02255	PTS system, Lactose/Cellobiose specific IIA subunit
SCRE_RS02990	PF02378	Phosphotransferase system, EIIC 
SCRE_RS03000	PF01432	Peptidase family M3
SCRE_RS03000	PF08439	Oligopeptidase F
SCRE_RS03005	PF01596	O-methyltransferase
SCRE_RS03010	PF13145	PPIC-type PPIASE domain
SCRE_RS03025	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
SCRE_RS03025	PF01411	tRNA synthetases class II (A)
SCRE_RS03025	PF02272	DHHA1 domain
SCRE_RS03030	PF00664	ABC transporter transmembrane region
SCRE_RS03030	PF00005	ABC transporter
SCRE_RS03040	PF01381	Helix-turn-helix
SCRE_RS03050	PF02388	FemAB family
SCRE_RS03060	PF01966	HD domain
SCRE_RS03070	PF00690	Cation transporter/ATPase, N-terminus
SCRE_RS03070	PF00689	Cation transporting ATPase, C-terminus
SCRE_RS03085	PF03462	PCRF domain
SCRE_RS03085	PF00472	RF-1 domain
SCRE_RS03090	PF00005	ABC transporter
SCRE_RS03095	PF18075	FtsX extracellular domain
SCRE_RS03095	PF02687	FtsX-like permease family
SCRE_RS03100	PF00753	Metallo-beta-lactamase superfamily
SCRE_RS03105	PF04851	Type III restriction enzyme, res subunit
SCRE_RS03105	PF13307	Helicase C-terminal domain
SCRE_RS03105	PF00929	Exonuclease
SCRE_RS03110	PF03601	Conserved hypothetical protein 698
SCRE_RS03115	PF01098	Cell cycle protein
SCRE_RS03120	PF01965	DJ-1/PfpI family
SCRE_RS03130	PF01751	Toprim domain
SCRE_RS03130	PF00204	DNA gyrase B
SCRE_RS03130	PF00986	DNA gyrase B subunit, carboxyl terminus
SCRE_RS03130	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SCRE_RS03135	PF06160	Septation ring formation regulator, EzrA 
SCRE_RS03140	PF10282	Lactonase, 7-bladed beta-propeller
SCRE_RS03145	PF00072	Response regulator receiver domain
SCRE_RS03145	PF00486	Transcriptional regulatory protein, C terminal
SCRE_RS03150	PF00512	His Kinase A (phospho-acceptor) domain
SCRE_RS03150	PF00672	HAMP domain
SCRE_RS03150	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SCRE_RS03155	PF01594	AI-2E family transporter
SCRE_RS03165	PF00205	Thiamine pyrophosphate enzyme, central domain
SCRE_RS03165	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
SCRE_RS03165	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
SCRE_RS03170	PF03306	Alpha-acetolactate decarboxylase
SCRE_RS03175	PF05670	NFACT protein RNA binding domain
SCRE_RS03190	PF00005	ABC transporter
SCRE_RS03190	PF09383	NIL domain
SCRE_RS03200	PF02229	Transcriptional Coactivator p15 (PC4)
SCRE_RS03205	PF13732	Domain of unknown function (DUF4162)
SCRE_RS03205	PF00005	ABC transporter
SCRE_RS03215	PF12705	PD-(D/E)XK nuclease superfamily
SCRE_RS03220	PF12705	PD-(D/E)XK nuclease superfamily
SCRE_RS03220	PF00580	UvrD/REP helicase N-terminal domain
SCRE_RS03220	PF13361	UvrD-like helicase C-terminal domain
SCRE_RS03225	PF02922	Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
SCRE_RS03225	PF02806	Alpha amylase, C-terminal all-beta domain
SCRE_RS03225	PF00128	Alpha amylase, catalytic domain
SCRE_RS03230	PF00132	Bacterial transferase hexapeptide (six repeats)
SCRE_RS03230	PF00483	Nucleotidyl transferase
SCRE_RS03235	PF00483	Nucleotidyl transferase
SCRE_RS03240	PF08323	Starch synthase catalytic domain
SCRE_RS03240	PF00534	Glycosyl transferases group 1
SCRE_RS03245	PF00343	Carbohydrate phosphorylase
SCRE_RS03255	PF00137	ATP synthase subunit C
SCRE_RS03260	PF00119	ATP synthase A chain
SCRE_RS03265	PF00430	ATP synthase B/B' CF(0)
SCRE_RS03270	PF00213	ATP synthase delta (OSCP) subunit
SCRE_RS03275	PF02874	ATP synthase alpha/beta family, beta-barrel domain
SCRE_RS03275	PF00306	ATP synthase alpha/beta chain, C terminal domain
SCRE_RS03275	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
SCRE_RS03280	PF00231	ATP synthase
SCRE_RS03285	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
SCRE_RS03285	PF02874	ATP synthase alpha/beta family, beta-barrel domain
SCRE_RS03290	PF02823	ATP synthase, Delta/Epsilon chain, beta-sandwich domain
SCRE_RS03290	PF00401	ATP synthase, Delta/Epsilon chain, long alpha-helix domain
SCRE_RS03295	PF00275	EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
SCRE_RS03305	PF01223	DNA/RNA non-specific endonuclease
SCRE_RS03310	PF00005	ABC transporter
SCRE_RS03310	PF00664	ABC transporter transmembrane region
SCRE_RS03315	PF00664	ABC transporter transmembrane region
SCRE_RS03315	PF00005	ABC transporter
SCRE_RS03330	PF03788	LrgA family
SCRE_RS03335	PF04172	LrgB-like family 
SCRE_RS03340	PF00156	Phosphoribosyl transferase domain
SCRE_RS03350	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
SCRE_RS03350	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
SCRE_RS03350	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
SCRE_RS03350	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
SCRE_RS03355	PF07992	Pyridine nucleotide-disulphide oxidoreductase
SCRE_RS03360	PF01433	Peptidase family M1 domain
SCRE_RS03360	PF11838	ERAP1-like C-terminal domain
SCRE_RS03365	PF08220	DeoR-like helix-turn-helix domain
SCRE_RS03365	PF00455	DeoR C terminal sensor domain
SCRE_RS03370	PF00294	pfkB family carbohydrate kinase
SCRE_RS03375	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
SCRE_RS03375	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
SCRE_RS03385	PF02645	Uncharacterised protein, DegV family COG1307
SCRE_RS03390	PF13735	tRNA nucleotidyltransferase domain 2 putative
SCRE_RS03390	PF12627	Probable RNA and SrmB- binding site of polymerase A
SCRE_RS03390	PF01743	Poly A polymerase head domain
SCRE_RS03395	PF00005	ABC transporter
SCRE_RS03395	PF16326	ABC transporter C-terminal domain
SCRE_RS03395	PF12848	ABC transporter
SCRE_RS03400	PF01409	tRNA synthetases class II core domain (F)
SCRE_RS03400	PF02912	Aminoacyl tRNA synthetase class II, N-terminal domain
SCRE_RS03405	PF13673	Acetyltransferase (GNAT) domain
SCRE_RS03410	PF03483	B3/4 domain
SCRE_RS03410	PF03147	Ferredoxin-fold anticodon binding domain
SCRE_RS03410	PF17759	Phenylalanyl tRNA synthetase beta chain CLM domain
SCRE_RS03410	PF03484	tRNA synthetase B5 domain
SCRE_RS03410	PF01588	Putative tRNA binding domain
SCRE_RS03425	PF02632	BioY family
SCRE_RS03435	PF07992	Pyridine nucleotide-disulphide oxidoreductase
SCRE_RS03435	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
SCRE_RS03440	PF12704	MacB-like periplasmic core domain
SCRE_RS03440	PF02687	FtsX-like permease family
SCRE_RS03450	PF16360	GTP-binding GTPase Middle Region
SCRE_RS03450	PF01926	50S ribosome-binding GTPase
SCRE_RS03450	PF13167	GTP-binding GTPase N-terminal
SCRE_RS03460	PF00753	Metallo-beta-lactamase superfamily
SCRE_RS03460	PF12706	Beta-lactamase superfamily domain
SCRE_RS03470	PF00106	short chain dehydrogenase
SCRE_RS03485	PF02272	DHHA1 domain
SCRE_RS03485	PF10141	Single-strand DNA-specific exonuclease, C terminal domain
SCRE_RS03485	PF01368	DHH family
SCRE_RS03485	PF17768	RecJ OB domain
SCRE_RS03495	PF00005	ABC transporter
SCRE_RS03500	PF00392	Bacterial regulatory proteins, gntR family
SCRE_RS03505	PF07733	Bacterial DNA polymerase III alpha NTPase domain
SCRE_RS03505	PF14579	Helix-hairpin-helix motif
SCRE_RS03505	PF01336	OB-fold nucleic acid binding domain
SCRE_RS03505	PF02811	PHP domain
SCRE_RS03505	PF17657	Bacterial DNA polymerase III alpha subunit finger domain
SCRE_RS03510	PF00365	Phosphofructokinase
SCRE_RS03515	PF00224	Pyruvate kinase, barrel domain
SCRE_RS03515	PF02887	Pyruvate kinase, alpha/beta domain
SCRE_RS03520	PF10502	Signal peptidase, peptidase S26 
SCRE_RS03525	PF01545	Cation efflux family
SCRE_RS03525	PF16916	Dimerisation domain of Zinc Transporter
SCRE_RS03530	PF13361	UvrD-like helicase C-terminal domain
SCRE_RS03530	PF00580	UvrD/REP helicase N-terminal domain
SCRE_RS03550	PF01509	TruB family pseudouridylate synthase (N terminal domain)
SCRE_RS03550	PF16198	tRNA pseudouridylate synthase B C-terminal domain
SCRE_RS03555	PF06574	FAD synthetase
SCRE_RS03555	PF01687	Riboflavin kinase
SCRE_RS03560	PF03960	ArsC family
SCRE_RS03565	PF05256	Uncharacterised protein family (UPF0223)
SCRE_RS03570	PF00459	Inositol monophosphatase family
SCRE_RS03575	PF01189	16S rRNA methyltransferase RsmB/F
SCRE_RS03575	PF17126	RsmF rRNA methyltransferase first C-terminal domain
SCRE_RS03575	PF17125	N-terminal domain of 16S rRNA methyltransferase RsmF
SCRE_RS03580	PF12849	PBP superfamily domain
SCRE_RS03585	PF00528	Binding-protein-dependent transport system inner membrane component
SCRE_RS03590	PF00528	Binding-protein-dependent transport system inner membrane component
SCRE_RS03595	PF00005	ABC transporter
SCRE_RS03600	PF00005	ABC transporter
SCRE_RS03605	PF01895	PhoU domain
SCRE_RS03610	PF04002	RadC-like JAB domain
SCRE_RS03615	PF07722	Peptidase C26
SCRE_RS03620	PF06971	Putative DNA-binding protein N-terminus
SCRE_RS03620	PF02629	CoA binding domain
SCRE_RS03630	PF00266	Aminotransferase class-V
SCRE_RS03635	PF14572	Phosphoribosyl synthetase-associated domain
SCRE_RS03635	PF13793	N-terminal domain of ribose phosphate pyrophosphokinase
SCRE_RS03645	PF04607	Region found in RelA / SpoT proteins
SCRE_RS03650	PF01513	ATP-NAD kinase
SCRE_RS03655	PF00849	RNA pseudouridylate synthase
SCRE_RS03660	PF01515	Phosphate acetyl/butaryl transferase
SCRE_RS03665	PF14815	NUDIX domain
SCRE_RS03665	PF00730	HhH-GPD superfamily base excision DNA repair protein
SCRE_RS03675	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
SCRE_RS03675	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
SCRE_RS03675	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
SCRE_RS03675	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
SCRE_RS03680	PF12822	ECF transporter, substrate-specific component
SCRE_RS03685	PF02441	Flavoprotein
SCRE_RS03695	PF01268	Formate--tetrahydrofolate ligase
SCRE_RS03715	PF02774	Semialdehyde dehydrogenase, dimerisation domain
SCRE_RS03715	PF01118	Semialdehyde dehydrogenase, NAD binding domain
SCRE_RS03730	PF00466	Ribosomal protein L10
SCRE_RS03735	PF16320	Ribosomal protein L7/L12 dimerisation domain
SCRE_RS03735	PF00542	Ribosomal protein L7/L12 C-terminal domain
SCRE_RS03740	PF05239	PRC-barrel domain
SCRE_RS03740	PF01782	RimM N-terminal domain
SCRE_RS03745	PF01746	tRNA (Guanine-1)-methyltransferase
SCRE_RS03750	PF01297	Zinc-uptake complex component A periplasmic
SCRE_RS03750	PF09223	ZinT (YodA) periplasmic lipocalin-like zinc-recruitment
SCRE_RS03765	PF13185	GAF domain
SCRE_RS03770	PF12169	DNA polymerase III subunits gamma and tau domain III
SCRE_RS03780	PF03099	Biotin/lipoate A/B protein ligase family
SCRE_RS03780	PF02237	Biotin protein ligase C terminal domain
SCRE_RS03780	PF08279	HTH domain
SCRE_RS03785	PF00356	Bacterial regulatory proteins, lacI family
SCRE_RS03790	PF08544	GHMP kinases C terminal 
SCRE_RS03790	PF00288	GHMP kinases N terminal domain
SCRE_RS03790	PF10509	Galactokinase galactose-binding signature
SCRE_RS03795	PF01087	Galactose-1-phosphate uridyl transferase, N-terminal domain
SCRE_RS03795	PF02744	Galactose-1-phosphate uridyl transferase, C-terminal domain
SCRE_RS03800	PF09269	Domain of unknown function (DUF1967)
SCRE_RS03800	PF01926	50S ribosome-binding GTPase
SCRE_RS03800	PF01018	GTP1/OBG
SCRE_RS03810	PF01522	Polysaccharide deacetylase
SCRE_RS03815	PF00742	Homoserine dehydrogenase
SCRE_RS03815	PF03447	Homoserine dehydrogenase, NAD binding domain
SCRE_RS03820	PF08544	GHMP kinases C terminal 
SCRE_RS03820	PF00288	GHMP kinases N terminal domain
SCRE_RS03830	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
SCRE_RS03830	PF02378	Phosphotransferase system, EIIC 
SCRE_RS03840	PF07690	Major Facilitator Superfamily
SCRE_RS03845	PF03466	LysR substrate binding domain
SCRE_RS03845	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
SCRE_RS03855	PF01180	Dihydroorotate dehydrogenase
SCRE_RS03860	PF00215	Orotidine 5'-phosphate decarboxylase / HUMPS family
SCRE_RS03870	PF00156	Phosphoribosyl transferase domain
SCRE_RS03875	PF06855	YozE SAM-like fold
SCRE_RS03880	PF02562	PhoH-like protein
SCRE_RS03900	PF05222	Alanine dehydrogenase/PNT, N-terminal domain
SCRE_RS03900	PF01262	Alanine dehydrogenase/PNT, C-terminal domain
SCRE_RS03915	PF00890	FAD binding domain
SCRE_RS03915	PF04205	FMN-binding domain
SCRE_RS03915	PF03358	NADPH-dependent FMN reductase
SCRE_RS03920	PF00664	ABC transporter transmembrane region
SCRE_RS03920	PF00005	ABC transporter
SCRE_RS03925	PF00664	ABC transporter transmembrane region
SCRE_RS03925	PF00005	ABC transporter
SCRE_RS03930	PF02130	Uncharacterized protein family UPF0054
SCRE_RS03935	PF01219	Prokaryotic diacylglycerol kinase
SCRE_RS03940	PF01926	50S ribosome-binding GTPase
SCRE_RS03940	PF07650	KH domain
SCRE_RS03950	PF00293	NUDIX domain
SCRE_RS03970	PF01149	Formamidopyrimidine-DNA glycosylase N-terminal domain
SCRE_RS03970	PF06827	Zinc finger found in FPG and IleRS
SCRE_RS03970	PF06831	Formamidopyrimidine-DNA glycosylase H2TH domain
SCRE_RS03975	PF01121	Dephospho-CoA kinase
SCRE_RS03980	PF07690	Major Facilitator Superfamily
SCRE_RS03980	PF00083	Sugar (and other) transporter
SCRE_RS03990	PF00575	S1 RNA binding domain
SCRE_RS03990	PF00773	RNB domain
SCRE_RS03990	PF08206	Ribonuclease B OB domain
SCRE_RS03990	PF17876	Cold shock domain
SCRE_RS03995	PF01668	SmpB protein
SCRE_RS04005	PF00753	Metallo-beta-lactamase superfamily
SCRE_RS04005	PF13567	Domain of unknown function (DUF4131)
SCRE_RS04005	PF03772	Competence protein
SCRE_RS04015	PF02894	Oxidoreductase family, C-terminal alpha/beta domain
SCRE_RS04015	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
SCRE_RS04020	PF03167	Uracil DNA glycosylase superfamily
SCRE_RS04025	PF00293	NUDIX domain
SCRE_RS04030	PF01979	Amidohydrolase family
SCRE_RS04035	PF02773	S-adenosylmethionine synthetase, C-terminal domain
SCRE_RS04035	PF02772	S-adenosylmethionine synthetase, central domain
SCRE_RS04035	PF00438	S-adenosylmethionine synthetase, N-terminal domain
SCRE_RS04040	PF00275	EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
SCRE_RS04050	PF00392	Bacterial regulatory proteins, gntR family
SCRE_RS04050	PF07085	DRTGG domain
SCRE_RS04050	PF00571	CBS domain
SCRE_RS04050	PF03061	Thioesterase superfamily
SCRE_RS04055	PF00557	Metallopeptidase family M24
SCRE_RS04065	PF01047	MarR family
SCRE_RS04075	PF04138	GtrA-like protein
SCRE_RS04080	PF06177	QueT transporter
SCRE_RS04090	PF02558	Ketopantoate reductase PanE/ApbA
SCRE_RS04090	PF08546	Ketopantoate reductase PanE/ApbA C terminal
SCRE_RS04095	PF03120	NAD-dependent DNA ligase OB-fold domain
SCRE_RS04095	PF12826	Helix-hairpin-helix motif
SCRE_RS04095	PF03119	NAD-dependent DNA ligase C4 zinc finger domain
SCRE_RS04095	PF00533	BRCA1 C Terminus (BRCT) domain
SCRE_RS04095	PF01653	NAD-dependent DNA ligase adenylation domain
SCRE_RS04100	PF00781	Diacylglycerol kinase catalytic domain
SCRE_RS04105	PF00128	Alpha amylase, catalytic domain
SCRE_RS04105	PF02922	Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
SCRE_RS04105	PF17999	Pullulanase N1-terminal domain
SCRE_RS04110	PF00886	Ribosomal protein S16
SCRE_RS04120	PF08279	HTH domain
SCRE_RS04120	PF02829	3H domain
SCRE_RS04135	PF03932	CutC family
SCRE_RS04140	PF04237	YjbR
SCRE_RS04150	PF00664	ABC transporter transmembrane region
SCRE_RS04150	PF00005	ABC transporter
SCRE_RS04155	PF00392	Bacterial regulatory proteins, gntR family
SCRE_RS04155	PF00155	Aminotransferase class I and II
SCRE_RS04170	PF01165	Ribosomal protein S21
SCRE_RS04175	PF01741	Large-conductance mechanosensitive channel, MscL
SCRE_RS04180	PF10410	DnaB-helicase binding domain of primase
SCRE_RS04180	PF08275	DNA primase catalytic core, N-terminal domain
SCRE_RS04180	PF01807	CHC2 zinc finger
SCRE_RS04185	PF03979	Sigma-70 factor, region 1.1
SCRE_RS04185	PF00140	Sigma-70 factor, region 1.2
SCRE_RS04185	PF04542	Sigma-70 region 2 
SCRE_RS04185	PF04539	Sigma-70 region 3
SCRE_RS04185	PF04545	Sigma-70, region 4
SCRE_RS04190	PF01883	Iron-sulfur cluster assembly protein
SCRE_RS04195	PF05525	Branched-chain amino acid transport protein
SCRE_RS04200	PF02683	Cytochrome C biogenesis protein transmembrane region
SCRE_RS04205	PF08534	Redoxin
SCRE_RS04210	PF01641	SelR domain
SCRE_RS04210	PF01625	Peptide methionine sulfoxide reductase
SCRE_RS04215	PF12833	Helix-turn-helix domain
SCRE_RS04215	PF00072	Response regulator receiver domain
SCRE_RS04220	PF02743	Cache domain
SCRE_RS04220	PF00672	HAMP domain
SCRE_RS04220	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SCRE_RS04220	PF06580	Histidine kinase
SCRE_RS04235	PF00005	ABC transporter
SCRE_RS04245	PF07992	Pyridine nucleotide-disulphide oxidoreductase
SCRE_RS04245	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
SCRE_RS04250	PF00654	Voltage gated chloride channel
SCRE_RS04255	PF00478	IMP dehydrogenase / GMP reductase domain
SCRE_RS04260	PF01554	MatE
SCRE_RS04265	PF01361	Tautomerase enzyme
SCRE_RS04270	PF00265	Thymidine kinase
SCRE_RS04275	PF00472	RF-1 domain
SCRE_RS04275	PF03462	PCRF domain
SCRE_RS04280	PF05175	Methyltransferase small domain
SCRE_RS04285	PF01300	Telomere recombination
SCRE_RS04290	PF00464	Serine hydroxymethyltransferase
SCRE_RS04360	PF00117	Glutamine amidotransferase class-I
SCRE_RS04360	PF00958	GMP synthase C terminal domain
SCRE_RS04360	PF02540	NAD synthase
SCRE_RS04365	PF07702	UTRA domain
SCRE_RS04365	PF00392	Bacterial regulatory proteins, gntR family
SCRE_RS04370	PF04297	Putative helix-turn-helix protein, YlxM / p13 like
SCRE_RS04375	PF02978	Signal peptide binding domain
SCRE_RS04375	PF00448	SRP54-type protein, GTPase domain
SCRE_RS04375	PF02881	SRP54-type protein, helical bundle domain
SCRE_RS04380	PF00589	Phage integrase family
SCRE_RS04385	PF03099	Biotin/lipoate A/B protein ligase family
SCRE_RS04385	PF10437	Bacterial lipoate protein ligase C-terminus
SCRE_RS04390	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
SCRE_RS04390	PF07992	Pyridine nucleotide-disulphide oxidoreductase
SCRE_RS04395	PF02817	e3 binding domain
SCRE_RS04395	PF00198	2-oxoacid dehydrogenases acyltransferase (catalytic domain)
SCRE_RS04395	PF00364	Biotin-requiring enzyme
SCRE_RS04400	PF02780	Transketolase, C-terminal domain
SCRE_RS04400	PF02779	Transketolase, pyrimidine binding domain
SCRE_RS04405	PF00676	Dehydrogenase E1 component
SCRE_RS04425	PF01134	Glucose inhibited division protein A
SCRE_RS04430	PF00697	N-(5'phosphoribosyl)anthranilate (PRA) isomerase
SCRE_RS04435	PF01131	DNA topoisomerase
SCRE_RS04435	PF01751	Toprim domain
SCRE_RS04435	PF01396	Topoisomerase DNA binding C4 zinc finger
SCRE_RS04440	PF18255	DNA processing protein A sterile alpha motif domain
SCRE_RS04440	PF02481	DNA recombination-mediator protein A
SCRE_RS04445	PF12464	Maltose acetyltransferase 
SCRE_RS04445	PF00132	Bacterial transferase hexapeptide (six repeats)
SCRE_RS04450	PF01351	Ribonuclease HII
SCRE_RS04455	PF01926	50S ribosome-binding GTPase
SCRE_RS04460	PF00753	Metallo-beta-lactamase superfamily
SCRE_RS04475	PF03466	LysR substrate binding domain
SCRE_RS04475	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
SCRE_RS04480	PF01144	Coenzyme A transferase
SCRE_RS04485	PF01144	Coenzyme A transferase
SCRE_RS04490	PF00378	Enoyl-CoA hydratase/isomerase
SCRE_RS04495	PF00108	Thiolase, N-terminal domain
SCRE_RS04495	PF02803	Thiolase, C-terminal domain
SCRE_RS04500	PF02737	3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
SCRE_RS04500	PF00725	3-hydroxyacyl-CoA dehydrogenase, C-terminal domain
SCRE_RS04505	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
SCRE_RS04505	PF02770	Acyl-CoA dehydrogenase, middle domain
SCRE_RS04505	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
SCRE_RS04510	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
SCRE_RS04510	PF07992	Pyridine nucleotide-disulphide oxidoreductase
SCRE_RS04515	PF04203	Sortase domain
SCRE_RS04520	PF00521	DNA gyrase/topoisomerase IV, subunit A
SCRE_RS04520	PF03989	DNA gyrase C-terminal domain, beta-propeller
SCRE_RS04525	PF02866	lactate/malate dehydrogenase, alpha/beta C-terminal domain
SCRE_RS04525	PF00056	lactate/malate dehydrogenase, NAD binding domain
SCRE_RS04540	PF00575	S1 RNA binding domain
SCRE_RS04565	PF00521	DNA gyrase/topoisomerase IV, subunit A
SCRE_RS04565	PF03989	DNA gyrase C-terminal domain, beta-propeller
SCRE_RS04570	PF04439	Streptomycin adenylyltransferase
SCRE_RS04575	PF02661	Fic/DOC family
SCRE_RS04590	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SCRE_RS04590	PF01751	Toprim domain
SCRE_RS04590	PF00986	DNA gyrase B subunit, carboxyl terminus
SCRE_RS04590	PF00204	DNA gyrase B
SCRE_RS04595	PF02660	Glycerol-3-phosphate acyltransferase
SCRE_RS04605	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
SCRE_RS04610	PF00440	Bacterial regulatory proteins, tetR family
SCRE_RS04610	PF16295	Tetracyclin repressor-like, C-terminal domain
SCRE_RS04615	PF02645	Uncharacterised protein, DegV family COG1307
SCRE_RS04630	PF02146	Sir2 family
SCRE_RS04635	PF00113	Enolase, C-terminal TIM barrel domain
SCRE_RS04635	PF03952	Enolase, N-terminal domain
SCRE_RS04655	PF07690	Major Facilitator Superfamily
SCRE_RS04660	PF01336	OB-fold nucleic acid binding domain
SCRE_RS04660	PF00152	tRNA synthetases class II (D, K and N) 
SCRE_RS04670	PF00155	Aminotransferase class I and II
SCRE_RS04680	PF01047	MarR family
SCRE_RS04685	PF03358	NADPH-dependent FMN reductase
SCRE_RS04690	PF03883	Peroxide stress protein YaaA
SCRE_RS04700	PF03006	Haemolysin-III related
SCRE_RS04705	PF02653	Branched-chain amino acid transport system / permease component
SCRE_RS04710	PF02653	Branched-chain amino acid transport system / permease component
SCRE_RS04715	PF00005	ABC transporter
SCRE_RS04720	PF02608	ABC transporter substrate-binding protein PnrA-like
SCRE_RS04725	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
SCRE_RS04730	PF01791	DeoC/LacD family aldolase
SCRE_RS04735	PF00591	Glycosyl transferase family, a/b domain
SCRE_RS04735	PF02885	Glycosyl transferase family, helical bundle domain
SCRE_RS04735	PF07831	Pyrimidine nucleoside phosphorylase C-terminal domain
SCRE_RS04740	PF05175	Methyltransferase small domain
SCRE_RS04745	PF00485	Phosphoribulokinase / Uridine kinase family
SCRE_RS04750	PF01649	Ribosomal protein S20
SCRE_RS04765	PF09154	Domain of unknown function (DUF1939)
SCRE_RS04765	PF00128	Alpha amylase, catalytic domain
SCRE_RS04770	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SCRE_RS04770	PF00512	His Kinase A (phospho-acceptor) domain
SCRE_RS04775	PF00072	Response regulator receiver domain
SCRE_RS04775	PF00486	Transcriptional regulatory protein, C terminal
SCRE_RS04830	PF09397	Ftsk gamma domain
SCRE_RS04830	PF01580	FtsK/SpoIIIE family
SCRE_RS04830	PF17854	FtsK alpha domain
SCRE_RS04840	PF01719	Plasmid replication protein
SCRE_RS04860	PF01245	Ribosomal protein L19
SCRE_RS04865	PF00480	ROK family
SCRE_RS04870	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
SCRE_RS04870	PF02787	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
SCRE_RS04870	PF02142	MGS-like domain
SCRE_RS04875	PF00988	Carbamoyl-phosphate synthase small chain, CPSase domain
SCRE_RS04875	PF00117	Glutamine amidotransferase class-I
SCRE_RS04880	PF00185	Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
SCRE_RS04880	PF02729	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
SCRE_RS04885	PF00860	Permease family
SCRE_RS04890	PF00156	Phosphoribosyl transferase domain
SCRE_RS04900	PF02650	WhiA C-terminal HTH domain
SCRE_RS04900	PF14527	WhiA LAGLIDADG-like domain
SCRE_RS04900	PF10298	WhiA N-terminal LAGLIDADG-like domain
SCRE_RS04905	PF01933	Uncharacterised protein family UPF0052
SCRE_RS04910	PF03668	P-loop ATPase protein family
SCRE_RS04915	PF00334	Nucleoside diphosphate kinase
SCRE_RS04930	PF13344	Haloacid dehalogenase-like hydrolase
SCRE_RS04945	PF04055	Radical SAM superfamily
SCRE_RS04945	PF06969	HemN C-terminal domain
SCRE_RS04955	PF00583	Acetyltransferase (GNAT) family
SCRE_RS04960	PF12344	Ultra-violet resistance protein B
SCRE_RS04960	PF17757	UvrB interaction domain
SCRE_RS04960	PF04851	Type III restriction enzyme, res subunit
SCRE_RS04960	PF02151	UvrB/uvrC motif
SCRE_RS04960	PF00271	Helicase conserved C-terminal domain
SCRE_RS04965	PF00528	Binding-protein-dependent transport system inner membrane component
SCRE_RS04970	PF00005	ABC transporter
SCRE_RS04975	PF00005	ABC transporter
SCRE_RS04975	PF12848	ABC transporter
SCRE_RS04980	PF00005	ABC transporter
SCRE_RS04980	PF00664	ABC transporter transmembrane region
SCRE_RS04985	PF00005	ABC transporter
SCRE_RS04985	PF00664	ABC transporter transmembrane region
SCRE_RS04995	PF01832	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
SCRE_RS04995	PF01476	LysM domain
SCRE_RS05000	PF01926	50S ribosome-binding GTPase
SCRE_RS05005	PF07724	AAA domain (Cdc48 subfamily)
SCRE_RS05005	PF10431	C-terminal, D2-small domain, of ClpB protein 
SCRE_RS05005	PF06689	ClpX C4-type zinc finger
SCRE_RS05015	PF00186	Dihydrofolate reductase
SCRE_RS05025	PF00303	Thymidylate synthase
SCRE_RS05030	PF00654	Voltage gated chloride channel
SCRE_RS05055	PF03831	PhnA domain
SCRE_RS05055	PF08274	PhnA Zinc-Ribbon 
SCRE_RS05060	PF00849	RNA pseudouridylate synthase
SCRE_RS05060	PF01479	S4 domain
SCRE_RS05065	PF01252	Signal peptidase (SPase) II
SCRE_RS05070	PF03466	LysR substrate binding domain
SCRE_RS05070	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
SCRE_RS05080	PF02583	Metal-sensitive transcriptional repressor
SCRE_RS05090	PF00581	Rhodanese-like domain
SCRE_RS05090	PF17773	UPF0176 acylphosphatase like domain
SCRE_RS05090	PF12368	Rhodanase C-terminal
SCRE_RS05095	PF07992	Pyridine nucleotide-disulphide oxidoreductase
SCRE_RS05095	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
SCRE_RS05100	PF00581	Rhodanese-like domain
SCRE_RS05100	PF01206	Sulfurtransferase TusA
SCRE_RS05115	PF01016	Ribosomal L27 protein
SCRE_RS05125	PF00829	Ribosomal prokaryotic L21 protein
SCRE_RS05130	PF02926	THUMP domain
SCRE_RS05130	PF02568	Thiamine biosynthesis protein (ThiI)
SCRE_RS05135	PF00266	Aminotransferase class-V
SCRE_RS05140	PF06874	Firmicute fructose-1,6-bisphosphatase
SCRE_RS05145	PF03618	Kinase/pyrophosphorylase
SCRE_RS05150	PF08279	HTH domain
SCRE_RS05150	PF00571	CBS domain
SCRE_RS05155	PF00391	PEP-utilising enzyme, mobile domain
SCRE_RS05155	PF01326	Pyruvate phosphate dikinase, PEP/pyruvate binding domain
SCRE_RS05155	PF02896	PEP-utilising enzyme, TIM barrel domain
SCRE_RS05165	PF13416	Bacterial extracellular solute-binding protein
SCRE_RS05170	PF00528	Binding-protein-dependent transport system inner membrane component
SCRE_RS05175	PF00528	Binding-protein-dependent transport system inner membrane component
SCRE_RS05180	PF00005	ABC transporter
SCRE_RS05180	PF08402	TOBE domain
SCRE_RS05185	PF02873	UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain
SCRE_RS05185	PF01565	FAD binding domain 
SCRE_RS05195	PF06421	GTP-binding protein LepA C-terminus
SCRE_RS05195	PF03144	Elongation factor Tu domain 2
SCRE_RS05195	PF00009	Elongation factor Tu GTP binding domain
SCRE_RS05195	PF00679	Elongation factor G C-terminus
SCRE_RS05205	PF01546	Peptidase family M20/M25/M40
SCRE_RS05205	PF07687	Peptidase dimerisation domain
SCRE_RS05215	PF00485	Phosphoribulokinase / Uridine kinase family
SCRE_RS05220	PF02894	Oxidoreductase family, C-terminal alpha/beta domain
SCRE_RS05220	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
SCRE_RS05225	PF00270	DEAD/DEAH box helicase
SCRE_RS05225	PF00271	Helicase conserved C-terminal domain
SCRE_RS05230	PF00453	Ribosomal protein L20
SCRE_RS05235	PF01632	Ribosomal protein L35
SCRE_RS05240	PF05198	Translation initiation factor IF-3, N-terminal domain
SCRE_RS05240	PF00707	Translation initiation factor IF-3, C-terminal domain
SCRE_RS05245	PF02224	Cytidylate kinase
SCRE_RS05270	PF02595	Glycerate kinase family
SCRE_RS05280	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
SCRE_RS05280	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
SCRE_RS05280	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
SCRE_RS05280	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
SCRE_RS05290	PF02457	DisA bacterial checkpoint controller nucleotide-binding
SCRE_RS05295	PF08245	Mur ligase middle domain
SCRE_RS05295	PF08353	Domain of unknown function (DUF1727)
SCRE_RS05300	PF07685	CobB/CobQ-like glutamine amidotransferase domain
SCRE_RS05310	PF00005	ABC transporter
SCRE_RS05310	PF12848	ABC transporter
SCRE_RS05310	PF16326	ABC transporter C-terminal domain
SCRE_RS05330	PF00753	Metallo-beta-lactamase superfamily
SCRE_RS05330	PF07521	Zn-dependent metallo-hydrolase RNA specificity domain
SCRE_RS05330	PF17770	Ribonuclease J C-terminal domain
SCRE_RS05335	PF16325	Peptidase family U32 C-terminal domain
SCRE_RS05335	PF01136	Peptidase family U32
SCRE_RS05350	PF12732	YtxH-like protein
SCRE_RS05360	PF01790	Prolipoprotein diacylglyceryl transferase
SCRE_RS05365	PF07475	HPr Serine kinase C-terminal domain
SCRE_RS05365	PF02603	HPr Serine kinase N terminus
SCRE_RS05370	PF00293	NUDIX domain
SCRE_RS05380	PF10263	SprT-like family
SCRE_RS05385	PF17674	HHH domain
SCRE_RS05385	PF00575	S1 RNA binding domain
SCRE_RS05385	PF09371	Tex-like protein N-terminal domain
SCRE_RS05385	PF16921	Tex protein YqgF-like domain
SCRE_RS05390	PF03773	Predicted permease
SCRE_RS05395	PF09323	Domain of unknown function (DUF1980)
SCRE_RS05400	PF07690	Major Facilitator Superfamily
SCRE_RS05405	PF02781	Glucose-6-phosphate dehydrogenase, C-terminal domain
SCRE_RS05405	PF00479	Glucose-6-phosphate dehydrogenase, NAD binding domain
SCRE_RS05410	PF02881	SRP54-type protein, helical bundle domain
SCRE_RS05410	PF00448	SRP54-type protein, GTPase domain
SCRE_RS05445	PF01520	N-acetylmuramoyl-L-alanine amidase
SCRE_RS05445	PF08460	Bacterial SH3 domain
SCRE_RS05445	PF05257	CHAP domain
SCRE_RS05450	PF05105	Bacteriophage holin family 
SCRE_RS05515	PF00574	Clp protease
SCRE_RS05520	PF04860	Phage portal protein
SCRE_RS05545	PF00145	C-5 cytosine-specific DNA methylase
SCRE_RS05550	PF01555	DNA methylase
SCRE_RS05610	PF01367	5'-3' exonuclease, C-terminal SAM fold
SCRE_RS05610	PF01612	3'-5' exonuclease
SCRE_RS05610	PF02739	5'-3' exonuclease, N-terminal resolvase-like domain
SCRE_RS05610	PF00476	DNA polymerase family A
SCRE_RS05615	PF13958	Toxin ToxN, type III toxin-antitoxin system
SCRE_RS05650	PF13193	AMP-binding enzyme C-terminal domain
SCRE_RS05650	PF00501	AMP-binding enzyme
SCRE_RS05650	PF00668	Condensation domain
SCRE_RS05650	PF00550	Phosphopantetheine attachment site
SCRE_RS05665	PF02463	RecF/RecN/SMC N terminal domain
SCRE_RS05665	PF06470	SMC proteins Flexible Hinge Domain
SCRE_RS05670	PF00035	Double-stranded RNA binding motif
SCRE_RS05670	PF14622	Ribonuclease-III-like
SCRE_RS05675	PF00753	Metallo-beta-lactamase superfamily
SCRE_RS05680	PF13426	PAS domain
SCRE_RS05680	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SCRE_RS05680	PF00512	His Kinase A (phospho-acceptor) domain
SCRE_RS05680	PF00672	HAMP domain
SCRE_RS05685	PF00486	Transcriptional regulatory protein, C terminal
SCRE_RS05685	PF00072	Response regulator receiver domain
SCRE_RS05695	PF13439	Glycosyltransferase Family 4
SCRE_RS05695	PF00534	Glycosyl transferases group 1
SCRE_RS05700	PF13439	Glycosyltransferase Family 4
SCRE_RS05700	PF00534	Glycosyl transferases group 1
SCRE_RS05705	PF00356	Bacterial regulatory proteins, lacI family
SCRE_RS05710	PF01321	Creatinase/Prolidase N-terminal domain
SCRE_RS05710	PF00557	Metallopeptidase family M24
SCRE_RS05715	PF00398	Ribosomal RNA adenine dimethylase
SCRE_RS05720	PF16363	GDP-mannose 4,6 dehydratase
SCRE_RS05725	PF16363	GDP-mannose 4,6 dehydratase
SCRE_RS05730	PF00908	dTDP-4-dehydrorhamnose 3,5-epimerase
SCRE_RS05735	PF00483	Nucleotidyl transferase
SCRE_RS05740	PF00293	NUDIX domain
SCRE_RS05745	PF01266	FAD dependent oxidoreductase
SCRE_RS05750	PF01784	NIF3 (NGG1p interacting factor 3)
SCRE_RS05755	PF04816	tRNA (adenine(22)-N(1))-methyltransferase
SCRE_RS05770	PF05045	Rhamnan synthesis protein F
SCRE_RS05775	PF00535	Glycosyl transferase family 2
SCRE_RS05780	PF00005	ABC transporter
SCRE_RS05780	PF14524	Wzt C-terminal domain
SCRE_RS05790	PF00535	Glycosyl transferase family 2
SCRE_RS05800	PF04321	RmlD substrate binding domain
SCRE_RS05805	PF00535	Glycosyl transferase family 2
SCRE_RS05815	PF00534	Glycosyl transferases group 1
SCRE_RS05830	PF00535	Glycosyl transferase family 2
SCRE_RS05880	PF13408	Recombinase zinc beta ribbon domain
SCRE_RS05880	PF07508	Recombinase
SCRE_RS05900	PF05105	Bacteriophage holin family 
SCRE_RS05990	PF00574	Clp protease
SCRE_RS06000	PF13411	MerR HTH family regulatory protein
SCRE_RS06000	PF07739	TipAS antibiotic-recognition domain
SCRE_RS06005	PF03354	Phage Terminase 
SCRE_RS06030	PF00145	C-5 cytosine-specific DNA methylase
SCRE_RS06035	PF01555	DNA methylase
SCRE_RS06040	PF02773	S-adenosylmethionine synthetase, C-terminal domain
SCRE_RS06040	PF00438	S-adenosylmethionine synthetase, N-terminal domain
SCRE_RS06040	PF02772	S-adenosylmethionine synthetase, central domain
SCRE_RS06115	PF00196	Bacterial regulatory proteins, luxR family
SCRE_RS06115	PF04542	Sigma-70 region 2 
SCRE_RS06135	PF13166	AAA domain
SCRE_RS06155	PF02086	D12 class N6 adenine-specific DNA methyltransferase
SCRE_RS06160	PF02086	D12 class N6 adenine-specific DNA methyltransferase
SCRE_RS06180	PF00239	Resolvase, N terminal domain
SCRE_RS06180	PF02796	Helix-turn-helix domain of resolvase
SCRE_RS06195	PF02796	Helix-turn-helix domain of resolvase
SCRE_RS06195	PF00239	Resolvase, N terminal domain
SCRE_RS06205	PF03432	Relaxase/Mobilisation nuclease domain 
SCRE_RS06210	PF00082	Subtilase family
SCRE_RS06215	PF00004	ATPase family associated with various cellular activities (AAA)
SCRE_RS06240	PF01751	Toprim domain
SCRE_RS06240	PF01131	DNA topoisomerase
SCRE_RS06265	PF00078	Reverse transcriptase (RNA-dependent DNA polymerase)
SCRE_RS06300	PF01695	IstB-like ATP binding protein
SCRE_RS06325	PF04542	Sigma-70 region 2 
SCRE_RS06325	PF04539	Sigma-70 region 3
SCRE_RS06325	PF04545	Sigma-70, region 4
SCRE_RS06330	PF08241	Methyltransferase domain
SCRE_RS06340	PF14492	Elongation Factor G, domain II
SCRE_RS06340	PF03764	Elongation factor G, domain IV
SCRE_RS06340	PF00009	Elongation factor Tu GTP binding domain
SCRE_RS06340	PF00679	Elongation factor G C-terminus
SCRE_RS06385	PF03389	MobA/MobL family
SCRE_RS06385	PF01443	Viral (Superfamily 1) RNA helicase
SCRE_RS06385	PF17841	BID domain of Bartonella effector protein (Bep)
SCRE_RS06400	PF00664	ABC transporter transmembrane region
SCRE_RS06400	PF00005	ABC transporter
SCRE_RS06405	PF00005	ABC transporter
SCRE_RS06405	PF04954	Siderophore-interacting protein
SCRE_RS06405	PF00664	ABC transporter transmembrane region
SCRE_RS06405	PF08021	Siderophore-interacting FAD-binding domain
SCRE_RS06410	PF00005	ABC transporter
SCRE_RS06425	PF00440	Bacterial regulatory proteins, tetR family
SCRE_RS06425	PF08361	MAATS-type transcriptional repressor, C-terminal region
SCRE_RS06455	PF17841	BID domain of Bartonella effector protein (Bep)
SCRE_RS06455	PF01443	Viral (Superfamily 1) RNA helicase
SCRE_RS06455	PF03389	MobA/MobL family
SCRE_RS06480	PF01695	IstB-like ATP binding protein
SCRE_RS06495	PF05958	tRNA (Uracil-5-)-methyltransferase
SCRE_RS06500	PF03816	Cell envelope-related transcriptional attenuator domain
SCRE_RS06505	PF00800	Prephenate dehydratase
SCRE_RS06510	PF01202	Shikimate kinase
SCRE_RS06515	PF00275	EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
SCRE_RS06520	PF06133	Control of competence regulator ComK, YlbF/YmcA
SCRE_RS06525	PF02153	Prephenate dehydrogenase
SCRE_RS06535	PF01925	Sulfite exporter TauE/SafE
SCRE_RS06540	PF01264	Chorismate synthase
SCRE_RS06545	PF01761	3-dehydroquinate synthase
SCRE_RS06550	PF08501	Shikimate dehydrogenase substrate binding domain
SCRE_RS06550	PF18317	Shikimate 5'-dehydrogenase C-terminal domain
SCRE_RS06555	PF01487	Type I 3-dehydroquinase
SCRE_RS06560	PF17785	PUA-like domain
SCRE_RS06560	PF10672	S-adenosylmethionine-dependent methyltransferase
SCRE_RS06565	PF00884	Sulfatase
SCRE_RS06575	PF01048	Phosphorylase superfamily
SCRE_RS06580	PF01048	Phosphorylase superfamily
SCRE_RS06585	PF06026	Ribose 5-phosphate isomerase A (phosphoriboisomerase A)
SCRE_RS06590	PF12631	MnmE helical domain
SCRE_RS06590	PF10396	GTP-binding protein TrmE N-terminus
SCRE_RS06590	PF01926	50S ribosome-binding GTPase
SCRE_RS06595	PF01610	Transposase
SCRE_RS06595	PF13683	Integrase core domain
SCRE_RS06610	PF00121	Triosephosphate isomerase
SCRE_RS06615	PF03144	Elongation factor Tu domain 2
SCRE_RS06615	PF00009	Elongation factor Tu GTP binding domain
SCRE_RS06615	PF03143	Elongation factor Tu C-terminal domain
SCRE_RS06625	PF04539	Sigma-70 region 3
SCRE_RS06625	PF04545	Sigma-70, region 4
SCRE_RS06625	PF04542	Sigma-70 region 2 
SCRE_RS06630	PF00311	Phosphoenolpyruvate carboxylase
SCRE_RS06635	PF01098	Cell cycle protein
SCRE_RS06655	PF00300	Histidine phosphatase superfamily (branch 1)
SCRE_RS06660	PF00152	tRNA synthetases class II (D, K and N) 
SCRE_RS06660	PF01336	OB-fold nucleic acid binding domain
SCRE_RS06680	PF00465	Iron-containing alcohol dehydrogenase 
SCRE_RS06685	PF00923	Transaldolase/Fructose-6-phosphate aldolase
SCRE_RS06690	PF02901	Pyruvate formate lyase-like
SCRE_RS06690	PF01228	Glycine radical
SCRE_RS06695	PF02378	Phosphotransferase system, EIIC 
SCRE_RS06705	PF02255	PTS system, Lactose/Cellobiose specific IIA subunit
SCRE_RS06710	PF13936	Helix-turn-helix domain
SCRE_RS06710	PF04198	Putative sugar-binding domain
SCRE_RS06715	PF08220	DeoR-like helix-turn-helix domain
SCRE_RS06715	PF00455	DeoR C terminal sensor domain
SCRE_RS06720	PF04055	Radical SAM superfamily
SCRE_RS06725	PF02082	Transcriptional regulator
SCRE_RS06740	PF12704	MacB-like periplasmic core domain
SCRE_RS06740	PF02687	FtsX-like permease family
SCRE_RS06740	PF00005	ABC transporter
SCRE_RS06745	PF00440	Bacterial regulatory proteins, tetR family
SCRE_RS06750	PF02824	TGS domain
SCRE_RS06750	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
SCRE_RS06750	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
SCRE_RS06750	PF03129	Anticodon binding domain
SCRE_RS06760	PF01458	Uncharacterized protein family (UPF0051)
SCRE_RS06765	PF00258	Flavodoxin
SCRE_RS06770	PF01368	DHH family
SCRE_RS06770	PF02272	DHHA1 domain
SCRE_RS06775	PF01197	Ribosomal protein L31
SCRE_RS06790	PF08240	Alcohol dehydrogenase GroES-like domain
SCRE_RS06790	PF00107	Zinc-binding dehydrogenase
SCRE_RS06795	PF00005	ABC transporter
SCRE_RS06800	PF04069	Substrate binding domain of ABC-type glycine betaine transport system
SCRE_RS06810	PF03167	Uracil DNA glycosylase superfamily
SCRE_RS06820	PF01546	Peptidase family M20/M25/M40
SCRE_RS06825	PF00881	Nitroreductase family
SCRE_RS06835	PF08459	UvrC Helix-hairpin-helix N-terminal
SCRE_RS06835	PF01541	GIY-YIG catalytic domain
SCRE_RS06835	PF02151	UvrB/uvrC motif
SCRE_RS06840	PF02896	PEP-utilising enzyme, TIM barrel domain
SCRE_RS06840	PF00391	PEP-utilising enzyme, mobile domain
SCRE_RS06840	PF05524	PEP-utilising enzyme, N-terminal
SCRE_RS06845	PF00381	PTS HPr component phosphorylation site
SCRE_RS06850	PF00462	Glutaredoxin
SCRE_RS06855	PF08343	Ribonucleotide reductase N-terminal
SCRE_RS06855	PF02867	Ribonucleotide reductase, barrel domain
SCRE_RS06855	PF00317	Ribonucleotide reductase, all-alpha domain
SCRE_RS06865	PF00268	Ribonucleotide reductase, small chain
SCRE_RS06870	PF02517	CPBP intramembrane metalloprotease
SCRE_RS06880	PF01381	Helix-turn-helix
SCRE_RS06885	PF03577	Peptidase family C69
SCRE_RS06895	PF01553	Acyltransferase
SCRE_RS06905	PF05175	Methyltransferase small domain
SCRE_RS06910	PF01541	GIY-YIG catalytic domain
SCRE_RS06920	PF04140	Isoprenylcysteine carboxyl methyltransferase (ICMT) family 
SCRE_RS06925	PF00232	Glycosyl hydrolase family 1
SCRE_RS06930	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
SCRE_RS06930	PF02378	Phosphotransferase system, EIIC 
SCRE_RS06935	PF02255	PTS system, Lactose/Cellobiose specific IIA subunit
SCRE_RS06940	PF00874	PRD domain
SCRE_RS06940	PF03123	CAT RNA binding domain
SCRE_RS06945	PF07501	G5 domain
SCRE_RS06945	PF00728	Glycosyl hydrolase family 20, catalytic domain
SCRE_RS06945	PF00746	LPXTG cell wall anchor motif
SCRE_RS06945	PF04650	YSIRK type signal peptide
SCRE_RS06950	PF00294	pfkB family carbohydrate kinase
SCRE_RS06955	PF03611	PTS system sugar-specific permease component
SCRE_RS06970	PF02502	Ribose/Galactose Isomerase
SCRE_RS06975	PF02502	Ribose/Galactose Isomerase
SCRE_RS06980	PF08220	DeoR-like helix-turn-helix domain
SCRE_RS06980	PF00455	DeoR C terminal sensor domain
SCRE_RS06985	PF01791	DeoC/LacD family aldolase
SCRE_RS06995	PF13276	HTH-like domain
SCRE_RS06995	PF00665	Integrase core domain
SCRE_RS06995	PF13333	Integrase core domain
SCRE_RS07000	PF00271	Helicase conserved C-terminal domain
SCRE_RS07000	PF00270	DEAD/DEAH box helicase
SCRE_RS07020	PF00009	Elongation factor Tu GTP binding domain
SCRE_RS07020	PF03144	Elongation factor Tu domain 2
SCRE_RS07020	PF16658	Class II release factor RF3, C-terminal domain
SCRE_RS07030	PF18273	Type III R-M EcoP15I C-terminal domain
SCRE_RS07030	PF01555	DNA methylase
SCRE_RS07050	PF02875	Mur ligase family, glutamate ligase domain
SCRE_RS07050	PF08245	Mur ligase middle domain
SCRE_RS07050	PF01225	Mur ligase family, catalytic domain
SCRE_RS07055	PF07478	D-ala D-ala ligase C-terminus
SCRE_RS07055	PF01820	D-ala D-ala ligase N-terminus
SCRE_RS07060	PF13662	Toprim domain
SCRE_RS07060	PF02132	RecR protein
SCRE_RS07065	PF03717	Penicillin-binding Protein dimerisation domain
SCRE_RS07065	PF00905	Penicillin binding protein transpeptidase domain
SCRE_RS07075	PF01381	Helix-turn-helix
SCRE_RS07080	PF05973	Phage derived protein Gp49-like (DUF891)
SCRE_RS07155	PF00300	Histidine phosphatase superfamily (branch 1)
SCRE_RS07160	PF01475	Ferric uptake regulator family
SCRE_RS07165	PF00216	Bacterial DNA-binding protein
SCRE_RS07170	PF02645	Uncharacterised protein, DegV family COG1307
SCRE_RS07175	PF01032	FecCD transport family
SCRE_RS07180	PF01032	FecCD transport family
SCRE_RS07185	PF00005	ABC transporter
SCRE_RS07190	PF01497	Periplasmic binding protein
SCRE_RS07195	PF00149	Calcineurin-like phosphoesterase
SCRE_RS07200	PF13476	AAA domain
SCRE_RS07205	PF01316	Arginine repressor, DNA binding domain
SCRE_RS07205	PF02863	Arginine repressor, C-terminal domain
SCRE_RS07210	PF01479	S4 domain
SCRE_RS07210	PF01728	FtsJ-like methyltransferase
SCRE_RS07215	PF00348	Polyprenyl synthetase
SCRE_RS07220	PF02609	Exonuclease VII small subunit
SCRE_RS07225	PF13742	OB-fold nucleic acid binding domain
SCRE_RS07225	PF02601	Exonuclease VII, large subunit
SCRE_RS07230	PF01256	Carbohydrate kinase
SCRE_RS07235	PF00763	Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
SCRE_RS07235	PF02882	Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
SCRE_RS07240	PF02687	FtsX-like permease family
SCRE_RS07240	PF12704	MacB-like periplasmic core domain
SCRE_RS07245	PF00005	ABC transporter
SCRE_RS07270	PF08796	Protein of unknown function (DUF1797)
SCRE_RS07275	PF00004	ATPase family associated with various cellular activities (AAA)
SCRE_RS07275	PF07724	AAA domain (Cdc48 subfamily)
SCRE_RS07275	PF17871	AAA lid domain
SCRE_RS07275	PF10431	C-terminal, D2-small domain, of ClpB protein 
SCRE_RS07290	PF08279	HTH domain
SCRE_RS07290	PF13280	WYL domain
SCRE_RS07310	PF06962	Putative rRNA methylase
SCRE_RS07315	PF04055	Radical SAM superfamily
SCRE_RS07315	PF16199	Radical_SAM C-terminal domain
SCRE_RS07325	PF01569	PAP2 superfamily
SCRE_RS07330	PF12822	ECF transporter, substrate-specific component
SCRE_RS07335	PF00588	SpoU rRNA Methylase family
SCRE_RS07350	PF01809	Putative membrane protein insertion efficiency factor
SCRE_RS07355	PF01479	S4 domain
SCRE_RS07355	PF00849	RNA pseudouridylate synthase
SCRE_RS07360	PF04079	Segregation and condensation complex subunit ScpB
SCRE_RS07365	PF02616	Segregation and condensation protein ScpA
SCRE_RS07370	PF02899	Phage integrase, N-terminal SAM-like domain
SCRE_RS07370	PF00589	Phage integrase family
SCRE_RS07385	PF01725	Ham1 family
SCRE_RS07390	PF01177	Asp/Glu/Hydantoin racemase
SCRE_RS07395	PF03672	Uncharacterised protein family (UPF0154)
SCRE_RS07400	PF01027	Inhibitor of apoptosis-promoting Bax1
SCRE_RS07410	PF08032	RNA 2'-O ribose methyltransferase substrate binding
SCRE_RS07410	PF00588	SpoU rRNA Methylase family
SCRE_RS07415	PF00708	Acylphosphatase
SCRE_RS07420	PF02096	60Kd inner membrane protein
SCRE_RS07425	PF13344	Haloacid dehalogenase-like hydrolase
SCRE_RS07425	PF00293	NUDIX domain
SCRE_RS07430	PF03449	Transcription elongation factor, N-terminal
SCRE_RS07430	PF01272	Transcription elongation factor, GreA/GreB, C-term
SCRE_RS07435	PF02618	YceG-like family
SCRE_RS07450	PF02875	Mur ligase family, glutamate ligase domain
SCRE_RS07450	PF01225	Mur ligase family, catalytic domain
SCRE_RS07450	PF08245	Mur ligase middle domain
SCRE_RS07460	PF12419	SNF2 Helicase protein 
SCRE_RS07460	PF00271	Helicase conserved C-terminal domain
SCRE_RS07460	PF00176	SNF2 family N-terminal domain
SCRE_RS07465	PF14714	KH-domain-like of EngA bacterial GTPase enzymes, C-terminal
SCRE_RS07465	PF01926	50S ribosome-binding GTPase
SCRE_RS07470	PF01695	IstB-like ATP binding protein
SCRE_RS07470	PF07319	Primosomal protein DnaI N-terminus
SCRE_RS07480	PF03477	ATP cone domain
SCRE_RS07485	PF03372	Endonuclease/Exonuclease/phosphatase family
SCRE_RS07490	PF00358	phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
SCRE_RS07490	PF00367	phosphotransferase system, EIIB
SCRE_RS07490	PF02378	Phosphotransferase system, EIIC 
SCRE_RS07495	PF00486	Transcriptional regulatory protein, C terminal
SCRE_RS07495	PF00072	Response regulator receiver domain
SCRE_RS07500	PF00393	6-phosphogluconate dehydrogenase, C-terminal domain
SCRE_RS07500	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
SCRE_RS07515	PF01435	Peptidase family M48
SCRE_RS07520	PF04011	LemA family
SCRE_RS07525	PF02527	rRNA small subunit methyltransferase G
SCRE_RS07530	PF01501	Glycosyl transferase family 8
SCRE_RS07530	PF08437	Glycosyl transferase family 8 C-terminal
SCRE_RS07535	PF00106	short chain dehydrogenase
SCRE_RS07545	PF00005	ABC transporter
SCRE_RS07545	PF12558	ATP-binding cassette cobalt transporter
SCRE_RS07575	PF07155	ECF-type riboflavin transporter, S component
SCRE_RS07665	PF00528	Binding-protein-dependent transport system inner membrane component
SCRE_RS07670	PF09383	NIL domain
SCRE_RS07670	PF00005	ABC transporter
SCRE_RS07675	PF01546	Peptidase family M20/M25/M40
SCRE_RS07675	PF07687	Peptidase dimerisation domain
SCRE_RS07680	PF03180	NLPA lipoprotein
SCRE_RS07685	PF00497	Bacterial extracellular solute-binding proteins, family 3
SCRE_RS07695	PF01381	Helix-turn-helix
SCRE_RS07700	PF01709	Transcriptional regulator
SCRE_RS07705	PF05636	HIGH Nucleotidyl Transferase
SCRE_RS07715	PF13649	Methyltransferase domain
SCRE_RS07725	PF01966	HD domain
SCRE_RS07730	PF01467	Cytidylyltransferase-like
SCRE_RS07735	PF01985	CRS1 / YhbY (CRM) domain
SCRE_RS07740	PF01926	50S ribosome-binding GTPase
SCRE_RS07755	PF00892	EamA-like transporter family
SCRE_RS07760	PF02637	GatB domain
SCRE_RS07760	PF02934	GatB/GatE catalytic domain
SCRE_RS07770	PF01425	Amidase
SCRE_RS07775	PF02686	Glu-tRNAGln amidotransferase C subunit
SCRE_RS07780	PF00152	tRNA synthetases class II (D, K and N) 
SCRE_RS07780	PF02938	GAD domain
SCRE_RS07780	PF01336	OB-fold nucleic acid binding domain
SCRE_RS07785	PF00857	Isochorismatase family
SCRE_RS07790	PF08222	CodY helix-turn-helix domain
SCRE_RS07790	PF06018	CodY GAF-like domain
SCRE_RS07795	PF00155	Aminotransferase class I and II
SCRE_RS07800	PF00582	Universal stress protein family
SCRE_RS07810	PF00710	Asparaginase, N-terminal
SCRE_RS07810	PF17763	Glutaminase/Asparaginase C-terminal domain
SCRE_RS07815	PF00271	Helicase conserved C-terminal domain
SCRE_RS07815	PF17191	RecG wedge domain
SCRE_RS07815	PF00270	DEAD/DEAH box helicase
SCRE_RS07820	PF01168	Alanine racemase, N-terminal domain
SCRE_RS07820	PF00842	Alanine racemase, C-terminal domain
SCRE_RS07825	PF01648	4'-phosphopantetheinyl transferase superfamily
SCRE_RS07830	PF00793	DAHP synthetase I family
SCRE_RS07835	PF02810	SEC-C motif
SCRE_RS07835	PF07517	SecA DEAD-like domain
SCRE_RS07835	PF07516	SecA Wing and Scaffold domain
SCRE_RS07835	PF01043	SecA preprotein cross-linking domain
SCRE_RS07845	PF01238	Phosphomannose isomerase type I
SCRE_RS07850	PF00392	Bacterial regulatory proteins, gntR family
SCRE_RS07850	PF07702	UTRA domain
SCRE_RS07855	PF02378	Phosphotransferase system, EIIC 
SCRE_RS07860	PF00232	Glycosyl hydrolase family 1
SCRE_RS07865	PF02255	PTS system, Lactose/Cellobiose specific IIA subunit
SCRE_RS07870	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
SCRE_RS07875	PF00005	ABC transporter
SCRE_RS07875	PF00664	ABC transporter transmembrane region
SCRE_RS07880	PF00005	ABC transporter
SCRE_RS07880	PF00664	ABC transporter transmembrane region
SCRE_RS07890	PF00724	NADH:flavin oxidoreductase / NADH oxidase family
SCRE_RS07895	PF01327	Polypeptide deformylase
SCRE_RS07900	PF00480	ROK family
SCRE_RS07905	PF02378	Phosphotransferase system, EIIC 
SCRE_RS07905	PF00367	phosphotransferase system, EIIB
SCRE_RS07905	PF00358	phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
SCRE_RS07910	PF08244	Glycosyl hydrolases family 32 C terminal
SCRE_RS07910	PF00251	Glycosyl hydrolases family 32 N-terminal domain
SCRE_RS07915	PF00356	Bacterial regulatory proteins, lacI family
SCRE_RS07925	PF00005	ABC transporter
SCRE_RS07925	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
SCRE_RS07930	PF00005	ABC transporter
SCRE_RS07930	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
SCRE_RS07935	PF00528	Binding-protein-dependent transport system inner membrane component
SCRE_RS07935	PF12911	N-terminal TM domain of oligopeptide transport permease C
SCRE_RS07940	PF00528	Binding-protein-dependent transport system inner membrane component
SCRE_RS07945	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
SCRE_RS07950	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
SCRE_RS07960	PF06418	CTP synthase N-terminus
SCRE_RS07960	PF00117	Glutamine amidotransferase class-I
SCRE_RS07965	PF05066	HB1, ASXL, restriction endonuclease HTH domain
SCRE_RS07975	PF05697	Bacterial trigger factor protein (TF)
SCRE_RS07975	PF05698	Bacterial trigger factor protein (TF) C-terminus
SCRE_RS07975	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
SCRE_RS07980	PF04260	Protein of unknown function (DUF436) 
SCRE_RS07985	PF07155	ECF-type riboflavin transporter, S component
SCRE_RS07990	PF08543	Phosphomethylpyrimidine kinase
SCRE_RS07995	PF01416	tRNA pseudouridine synthase
SCRE_RS08000	PF00293	NUDIX domain
SCRE_RS08000	PF13344	Haloacid dehalogenase-like hydrolase
SCRE_RS08005	PF01556	DnaJ C terminal domain
SCRE_RS08005	PF00684	DnaJ central domain
SCRE_RS08005	PF00226	DnaJ domain
SCRE_RS08010	PF00012	Hsp70 protein
SCRE_RS08015	PF01025	GrpE
SCRE_RS08020	PF03444	Winged helix-turn-helix transcription repressor, HrcA DNA-binding
SCRE_RS08020	PF01628	HrcA protein C terminal domain
SCRE_RS08025	PF00923	Transaldolase/Fructose-6-phosphate aldolase
SCRE_RS08030	PF03611	PTS system sugar-specific permease component
SCRE_RS08035	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
SCRE_RS08040	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
SCRE_RS08050	PF00300	Histidine phosphatase superfamily (branch 1)
SCRE_RS08055	PF05167	Uncharacterised ACR (DUF711)
SCRE_RS08065	PF00356	Bacterial regulatory proteins, lacI family
SCRE_RS08080	PF03613	PTS system mannose/fructose/sorbose family IID component
SCRE_RS08085	PF03609	PTS system sorbose-specific iic component
SCRE_RS08090	PF03830	PTS system sorbose subfamily IIB component
SCRE_RS08095	PF07470	Glycosyl Hydrolase Family 88
SCRE_RS08130	PF08124	Polysaccharide lyase family 8, N terminal alpha-helical domain
SCRE_RS08130	PF02884	Polysaccharide lyase family 8, C-terminal beta-sandwich domain
SCRE_RS08130	PF02278	Polysaccharide lyase family 8, super-sandwich domain
SCRE_RS08135	PF00255	Glutathione peroxidase
SCRE_RS08145	PF00390	Malic enzyme, N-terminal domain
SCRE_RS08145	PF03949	Malic enzyme, NAD binding domain
SCRE_RS08155	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
SCRE_RS08155	PF03466	LysR substrate binding domain
SCRE_RS08160	PF00380	Ribosomal protein S9/S16
SCRE_RS08165	PF00572	Ribosomal protein L13
SCRE_RS08170	PF02645	Uncharacterised protein, DegV family COG1307
SCRE_RS08180	PF08032	RNA 2'-O ribose methyltransferase substrate binding
SCRE_RS08180	PF00588	SpoU rRNA Methylase family
SCRE_RS08185	PF17912	MalK OB fold domain
SCRE_RS08185	PF03459	TOBE domain
SCRE_RS08185	PF00005	ABC transporter
SCRE_RS08190	PF13556	PucR C-terminal helix-turn-helix domain
SCRE_RS08195	PF00636	Ribonuclease III domain
SCRE_RS08200	PF09190	DALR domain
SCRE_RS08200	PF01406	tRNA synthetases class I (C) catalytic domain
SCRE_RS08205	PF00132	Bacterial transferase hexapeptide (six repeats)
SCRE_RS08210	PF00575	S1 RNA binding domain
SCRE_RS08210	PF00013	KH domain
SCRE_RS08210	PF03726	Polyribonucleotide nucleotidyltransferase, RNA binding domain
SCRE_RS08210	PF01138	3' exoribonuclease family, domain 1
SCRE_RS08210	PF03725	3' exoribonuclease family, domain 2
SCRE_RS08215	PF08439	Oligopeptidase F
SCRE_RS08215	PF01432	Peptidase family M3
SCRE_RS08225	PF00312	Ribosomal protein S15
SCRE_RS08230	PF00849	RNA pseudouridylate synthase
SCRE_RS08230	PF01479	S4 domain
SCRE_RS08245	PF01327	Polypeptide deformylase
SCRE_RS08255	PF14480	DNA polymerase III polC-type N-terminus I
SCRE_RS08255	PF07733	Bacterial DNA polymerase III alpha NTPase domain
SCRE_RS08255	PF11490	DNA polymerase III polC-type N-terminus II
SCRE_RS08255	PF17657	Bacterial DNA polymerase III alpha subunit finger domain
SCRE_RS08255	PF02811	PHP domain
SCRE_RS08255	PF00929	Exonuclease
SCRE_RS08260	PF03767	HAD superfamily, subfamily IIIB (Acid phosphatase)
SCRE_RS08265	PF03714	Bacterial pullanase-associated domain
SCRE_RS08265	PF02922	Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
SCRE_RS08265	PF00128	Alpha amylase, catalytic domain
SCRE_RS08270	PF13603	Leucyl-tRNA synthetase, Domain 2
SCRE_RS08270	PF09334	tRNA synthetases class I (M)
SCRE_RS08270	PF00133	tRNA synthetases class I (I, L, M and V)
SCRE_RS08270	PF08264	Anticodon-binding domain of tRNA
SCRE_RS08280	PF13683	Integrase core domain
SCRE_RS08280	PF01610	Transposase
SCRE_RS08285	PF01431	Peptidase family M13
SCRE_RS08285	PF05649	Peptidase family M13
SCRE_RS08290	PF00005	ABC transporter
SCRE_RS08295	PF00950	ABC 3 transport family
SCRE_RS08300	PF01297	Zinc-uptake complex component A periplasmic
SCRE_RS08310	PF02580	D-Tyr-tRNA(Tyr) deacylase
SCRE_RS08315	PF04607	Region found in RelA / SpoT proteins
SCRE_RS08315	PF13291	ACT domain
SCRE_RS08315	PF02824	TGS domain
SCRE_RS08320	PF04452	RNA methyltransferase
SCRE_RS08330	PF13673	Acetyltransferase (GNAT) domain
SCRE_RS08345	PF16193	AAA C-terminal domain
SCRE_RS08345	PF12002	MgsA AAA+ ATPase C terminal
SCRE_RS08345	PF05496	Holliday junction DNA helicase RuvB P-loop domain
SCRE_RS08365	PF01712	Deoxynucleoside kinase
SCRE_RS08370	PF02677	Epoxyqueuosine reductase QueH
SCRE_RS08380	PF00118	TCP-1/cpn60 chaperonin family
SCRE_RS08385	PF00166	Chaperonin 10 Kd subunit
SCRE_RS08395	PF03613	PTS system mannose/fructose/sorbose family IID component
SCRE_RS08400	PF03609	PTS system sorbose-specific iic component
SCRE_RS08420	PF00072	Response regulator receiver domain
SCRE_RS08420	PF00196	Bacterial regulatory proteins, luxR family
SCRE_RS08425	PF07730	Histidine kinase
SCRE_RS08435	PF00436	Single-strand binding protein family
SCRE_RS08440	PF01588	Putative tRNA binding domain
SCRE_RS08440	PF14794	Domain of unknown function (DUF4479)
SCRE_RS08445	PF00085	Thioredoxin
SCRE_RS08455	PF05343	M42 glutamyl aminopeptidase
SCRE_RS08460	PF07155	ECF-type riboflavin transporter, S component
SCRE_RS08465	PF08245	Mur ligase middle domain
SCRE_RS08465	PF02875	Mur ligase family, glutamate ligase domain
SCRE_RS08475	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
SCRE_RS08475	PF03129	Anticodon binding domain
SCRE_RS08475	PF04073	Aminoacyl-tRNA editing domain
SCRE_RS08480	PF02163	Peptidase family M50
SCRE_RS08490	PF01255	Putative undecaprenyl diphosphate synthase
SCRE_RS08505	PF00456	Transketolase, thiamine diphosphate binding domain
SCRE_RS08505	PF02780	Transketolase, C-terminal domain
SCRE_RS08505	PF02779	Transketolase, pyrimidine binding domain
SCRE_RS08520	PF00596	Class II Aldolase and Adducin N-terminal domain
SCRE_RS08525	PF01261	Xylose isomerase-like TIM barrel
SCRE_RS08530	PF00215	Orotidine 5'-phosphate decarboxylase / HUMPS family
SCRE_RS08535	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
SCRE_RS08540	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
SCRE_RS08545	PF03611	PTS system sugar-specific permease component
SCRE_RS08550	PF00004	ATPase family associated with various cellular activities (AAA)
SCRE_RS08550	PF10431	C-terminal, D2-small domain, of ClpB protein 
SCRE_RS08550	PF17871	AAA lid domain
SCRE_RS08550	PF07724	AAA domain (Cdc48 subfamily)
SCRE_RS08555	PF01380	SIS domain
SCRE_RS08560	PF00871	Acetokinase family
SCRE_RS08590	PF07963	Prokaryotic N-terminal methylation motif
SCRE_RS08595	PF00482	Type II secretion system (T2SS), protein F
SCRE_RS08600	PF00437	Type II/IV secretion system protein
SCRE_RS08610	PF00120	Glutamine synthetase, catalytic domain
SCRE_RS08610	PF03951	Glutamine synthetase, beta-Grasp domain
SCRE_RS08615	PF13411	MerR HTH family regulatory protein
SCRE_RS08635	PF00162	Phosphoglycerate kinase
SCRE_RS08645	PF04997	RNA polymerase Rpb1, domain 1
SCRE_RS08645	PF00623	RNA polymerase Rpb1, domain 2
SCRE_RS08645	PF04983	RNA polymerase Rpb1, domain 3
SCRE_RS08645	PF04998	RNA polymerase Rpb1, domain 5
SCRE_RS08645	PF05000	RNA polymerase Rpb1, domain 4
SCRE_RS08650	PF04561	RNA polymerase Rpb2, domain 2
SCRE_RS08650	PF04563	RNA polymerase beta subunit
SCRE_RS08650	PF00562	RNA polymerase Rpb2, domain 6
SCRE_RS08650	PF04560	RNA polymerase Rpb2, domain 7
SCRE_RS08650	PF04565	RNA polymerase Rpb2, domain 3
SCRE_RS08650	PF10385	RNA polymerase beta subunit external 1 domain
SCRE_RS08655	PF00912	Transglycosylase
SCRE_RS08655	PF00905	Penicillin binding protein transpeptidase domain
SCRE_RS08660	PF01479	S4 domain
SCRE_RS08660	PF00579	tRNA synthetases class I (W and Y)
SCRE_RS08665	PF13847	Methyltransferase domain
SCRE_RS08675	PF01812	5-formyltetrahydrofolate cyclo-ligase family
SCRE_RS08680	PF00749	tRNA synthetases class I (E and Q), catalytic domain
SCRE_RS08685	PF18073	Rubredoxin metal binding domain
SCRE_RS08690	PF00692	dUTPase
SCRE_RS08700	PF07479	NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus
SCRE_RS08700	PF01210	NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
SCRE_RS08705	PF00483	Nucleotidyl transferase
SCRE_RS08760	PF14659	Phage integrase, N-terminal SAM-like domain
SCRE_RS08760	PF00589	Phage integrase family
SCRE_RS08850	PF01196	Ribosomal protein L17
SCRE_RS08855	PF01000	RNA polymerase Rpb3/RpoA insert domain
SCRE_RS08855	PF03118	Bacterial RNA polymerase, alpha chain C terminal domain
SCRE_RS08855	PF01193	RNA polymerase Rpb3/Rpb11 dimerisation domain
SCRE_RS08860	PF00411	Ribosomal protein S11
SCRE_RS08865	PF00416	Ribosomal protein S13/S18
SCRE_RS08870	PF01176	Translation initiation factor 1A / IF-1
SCRE_RS08880	PF00344	SecY translocase
SCRE_RS08885	PF00828	Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A
SCRE_RS08890	PF00327	Ribosomal protein L30p/L7e
SCRE_RS08895	PF03719	Ribosomal protein S5, C-terminal domain
SCRE_RS08895	PF00333	Ribosomal protein S5, N-terminal domain
SCRE_RS08900	PF00861	Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast
SCRE_RS08905	PF00347	Ribosomal protein L6
SCRE_RS08910	PF00410	Ribosomal protein S8
SCRE_RS08915	PF00253	Ribosomal protein S14p/S29e
SCRE_RS08920	PF00281	Ribosomal protein L5
SCRE_RS08920	PF00673	ribosomal L5P family C-terminus
SCRE_RS08925	PF17136	Ribosomal proteins 50S L24/mitochondrial 39S L24
SCRE_RS08925	PF00467	KOW motif
SCRE_RS08930	PF00238	Ribosomal protein L14p/L23e
SCRE_RS08935	PF00366	Ribosomal protein S17
SCRE_RS08940	PF00831	Ribosomal L29 protein
SCRE_RS08945	PF00252	Ribosomal protein L16p/L10e
SCRE_RS08950	PF07650	KH domain
SCRE_RS08950	PF00189	Ribosomal protein S3, C-terminal domain
SCRE_RS08955	PF00237	Ribosomal protein L22p/L17e
SCRE_RS08960	PF00203	Ribosomal protein S19
SCRE_RS08965	PF00181	Ribosomal Proteins L2, RNA binding domain
SCRE_RS08965	PF03947	Ribosomal Proteins L2, C-terminal domain
SCRE_RS08970	PF00276	Ribosomal protein L23
SCRE_RS08975	PF00573	Ribosomal protein L4/L1 family
SCRE_RS08980	PF00297	Ribosomal protein L3
SCRE_RS08985	PF00338	Ribosomal protein S10p/S20e
SCRE_RS09000	PF01702	Queuine tRNA-ribosyltransferase
SCRE_RS09015	PF13380	CoA binding domain
SCRE_RS09020	PF01367	5'-3' exonuclease, C-terminal SAM fold
SCRE_RS09020	PF02739	5'-3' exonuclease, N-terminal resolvase-like domain
SCRE_RS09020	PF00476	DNA polymerase family A
SCRE_RS09030	PF00358	phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
SCRE_RS09030	PF02378	Phosphotransferase system, EIIC 
SCRE_RS09030	PF00367	phosphotransferase system, EIIB
SCRE_RS09040	PF00512	His Kinase A (phospho-acceptor) domain
SCRE_RS09040	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
SCRE_RS09045	PF00486	Transcriptional regulatory protein, C terminal
SCRE_RS09045	PF00072	Response regulator receiver domain
SCRE_RS09130	PF13597	Anaerobic ribonucleoside-triphosphate reductase
SCRE_RS09130	PF03477	ATP cone domain
SCRE_RS09140	PF13091	PLD-like domain
SCRE_RS09160	PF08245	Mur ligase middle domain
SCRE_RS09160	PF02875	Mur ligase family, glutamate ligase domain
SCRE_RS09165	PF06949	Protein of unknown function (DUF1292)
SCRE_RS09170	PF03652	Holliday junction resolvase
SCRE_RS09175	PF06135	IreB regulatory phosphoprotein
SCRE_RS09190	PF03960	ArsC family
SCRE_RS09195	PF00154	recA bacterial DNA recombination protein
SCRE_RS09200	PF00994	Probable molybdopterin binding domain
SCRE_RS09200	PF18146	Damage-inducible protein CinA KH domain
SCRE_RS09200	PF02464	Competence-damaged protein
SCRE_RS09205	PF12704	MacB-like periplasmic core domain
SCRE_RS09205	PF00005	ABC transporter
SCRE_RS09205	PF02687	FtsX-like permease family
SCRE_RS09225	PF00892	EamA-like transporter family
SCRE_RS09230	PF00117	Glutamine amidotransferase class-I
SCRE_RS09230	PF13673	Acetyltransferase (GNAT) domain
SCRE_RS09230	PF03352	Methyladenine glycosylase
SCRE_RS09230	PF00958	GMP synthase C terminal domain
SCRE_RS09230	PF13302	Acetyltransferase (GNAT) domain
SCRE_RS09235	PF07499	RuvA, C-terminal domain
SCRE_RS09235	PF01330	RuvA N terminal domain
SCRE_RS09240	PF01119	DNA mismatch repair protein, C-terminal domain
SCRE_RS09240	PF08676	MutL C terminal dimerisation domain
SCRE_RS09255	PF01624	MutS domain I
SCRE_RS09255	PF00488	MutS domain V
SCRE_RS09255	PF05188	MutS domain II
SCRE_RS09255	PF05190	MutS family domain IV
SCRE_RS09255	PF05192	MutS domain III
SCRE_RS09260	PF02863	Arginine repressor, C-terminal domain
SCRE_RS09260	PF01316	Arginine repressor, DNA binding domain
SCRE_RS09265	PF00750	tRNA synthetases class I (R)
SCRE_RS09265	PF05746	DALR anticodon binding domain
SCRE_RS09265	PF03485	Arginyl tRNA synthetase N terminal domain
SCRE_RS09270	PF07972	NrdI Flavodoxin like 
SCRE_RS09280	PF00343	Carbohydrate phosphorylase
SCRE_RS09285	PF02446	4-alpha-glucanotransferase
SCRE_RS09290	PF13416	Bacterial extracellular solute-binding protein
SCRE_RS09295	PF00528	Binding-protein-dependent transport system inner membrane component
SCRE_RS09300	PF00528	Binding-protein-dependent transport system inner membrane component
SCRE_RS09310	PF00532	Periplasmic binding proteins and sugar binding domain of LacI family
SCRE_RS09310	PF00356	Bacterial regulatory proteins, lacI family
SCRE_RS09315	PF02922	Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
SCRE_RS09315	PF00128	Alpha amylase, catalytic domain
SCRE_RS09315	PF17999	Pullulanase N1-terminal domain
SCRE_RS09320	PF02588	Uncharacterised 5xTM membrane BCR, YitT family COG1284
SCRE_RS09320	PF10035	Uncharacterized protein conserved in bacteria (DUF2179)
SCRE_RS09325	PF00152	tRNA synthetases class II (D, K and N) 
SCRE_RS09325	PF01336	OB-fold nucleic acid binding domain
SCRE_RS09325	PF02938	GAD domain
SCRE_RS09335	PF03129	Anticodon binding domain
SCRE_RS09335	PF13393	Histidyl-tRNA synthetase
SCRE_RS09340	PF01783	Ribosomal L32p protein family
SCRE_RS09345	PF00471	Ribosomal protein L33
SCRE_RS09355	PF01022	Bacterial regulatory protein, arsR family
SCRE_RS09395	PF00589	Phage integrase family
SCRE_RS09395	PF02899	Phage integrase, N-terminal SAM-like domain
SCRE_RS09415	PF07690	Major Facilitator Superfamily
SCRE_RS09425	PF02245	Methylpurine-DNA glycosylase (MPG)
SCRE_RS09440	PF04914	DltD protein
SCRE_RS09445	PF00550	Phosphopantetheine attachment site
SCRE_RS09450	PF03062	MBOAT, membrane-bound O-acyltransferase family
SCRE_RS09455	PF00501	AMP-binding enzyme
SCRE_RS09455	PF13193	AMP-binding enzyme C-terminal domain
SCRE_RS09545	PF01479	S4 domain
SCRE_RS09545	PF00163	Ribosomal protein S4/S9 N-terminal domain
SCRE_RS09550	PF13419	Haloacid dehalogenase-like hydrolase
SCRE_RS09560	PF00772	DnaB-like helicase N terminal domain
SCRE_RS09560	PF03796	DnaB-like helicase C terminal domain
SCRE_RS09565	PF03948	Ribosomal protein L9, C-terminal domain
SCRE_RS09565	PF01281	Ribosomal protein L9, N-terminal domain
SCRE_RS09570	PF01368	DHH family
SCRE_RS09570	PF02272	DHHA1 domain
SCRE_RS09575	PF01134	Glucose inhibited division protein A
SCRE_RS09575	PF13932	GidA associated domain
SCRE_RS09585	PF01476	LysM domain
SCRE_RS09585	PF05257	CHAP domain
SCRE_RS09590	PF01842	ACT domain
SCRE_RS09590	PF03315	Serine dehydratase beta chain
SCRE_RS09595	PF03313	Serine dehydratase alpha chain
SCRE_RS09605	PF01464	Transglycosylase SLT domain
SCRE_RS09610	PF02361	Cobalt transport protein
SCRE_RS09615	PF00005	ABC transporter
SCRE_RS09620	PF00005	ABC transporter
SCRE_RS09625	PF01066	CDP-alcohol phosphatidyltransferase
SCRE_RS09635	PF05193	Peptidase M16 inactive domain
SCRE_RS09635	PF00675	Insulinase (Peptidase family M16)
SCRE_RS09640	PF05193	Peptidase M16 inactive domain
SCRE_RS09650	PF02463	RecF/RecN/SMC N terminal domain
SCRE_RS09655	PF00478	IMP dehydrogenase / GMP reductase domain
SCRE_RS09655	PF00571	CBS domain
SCRE_RS09660	PF00579	tRNA synthetases class I (W and Y)
SCRE_RS09665	PF16363	GDP-mannose 4,6 dehydratase
SCRE_RS09670	PF00121	Triosephosphate isomerase
SCRE_RS09680	PF12848	ABC transporter
SCRE_RS09680	PF00005	ABC transporter
SCRE_RS09720	PF02590	Predicted SPOUT methyltransferase
SCRE_RS09725	PF13180	PDZ domain
SCRE_RS09730	PF02195	ParB-like nuclease domain
SCRE_RS09730	PF17762	HTH domain found in ParB protein
SCRE_RS09780	PF13333	Integrase core domain
SCRE_RS09780	PF13276	HTH-like domain
SCRE_RS09780	PF00665	Integrase core domain
