locus-tag class description SDSE_RS10640 PF08299 Bacterial dnaA protein helix-turn-helix SDSE_RS10640 PF00308 Bacterial dnaA protein SDSE_RS10645 PF02768 DNA polymerase III beta subunit, C-terminal domain SDSE_RS10645 PF02767 DNA polymerase III beta subunit, central domain SDSE_RS10645 PF00712 DNA polymerase III beta subunit, N-terminal domain SDSE_RS10665 PF06071 Protein of unknown function (DUF933) SDSE_RS10665 PF01926 50S ribosome-binding GTPase SDSE_RS10670 PF01195 Peptidyl-tRNA hydrolase SDSE_RS10675 PF03461 TRCF domain SDSE_RS10675 PF00270 DEAD/DEAH box helicase SDSE_RS10675 PF17757 UvrB interaction domain SDSE_RS10675 PF00271 Helicase conserved C-terminal domain SDSE_RS10675 PF02559 CarD-like/TRCF domain SDSE_RS10680 PF01943 Polysaccharide biosynthesis protein SDSE_RS10680 PF14667 Polysaccharide biosynthesis C-terminal domain SDSE_RS10685 PF01479 S4 domain SDSE_RS10700 PF01171 PP-loop family SDSE_RS10705 PF00156 Phosphoribosyl transferase domain SDSE_RS10710 PF00004 ATPase family associated with various cellular activities (AAA) SDSE_RS10710 PF01434 Peptidase family M41 SDSE_RS10710 PF17862 AAA+ lid domain SDSE_RS10710 PF06480 FtsH Extracellular SDSE_RS10715 PF13520 Amino acid permease SDSE_RS10720 PF13936 Helix-turn-helix domain SDSE_RS10835 PF01476 LysM domain SDSE_RS10835 PF05257 CHAP domain SDSE_RS10840 PF14572 Phosphoribosyl synthetase-associated domain SDSE_RS10840 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase SDSE_RS10845 PF11967 Recombination protein O N terminal SDSE_RS10845 PF02565 Recombination protein O C terminal SDSE_RS10850 PF02504 Fatty acid synthesis protein SDSE_RS10855 PF00550 Phosphopantetheine attachment site SDSE_RS10860 PF01259 SAICAR synthetase SDSE_RS10865 PF02769 AIR synthase related protein, C-terminal domain SDSE_RS10865 PF00586 AIR synthase related protein, N-terminal domain SDSE_RS10865 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain SDSE_RS10870 PF00156 Phosphoribosyl transferase domain SDSE_RS10870 PF13537 Glutamine amidotransferase domain SDSE_RS10875 PF02769 AIR synthase related protein, C-terminal domain SDSE_RS10875 PF00586 AIR synthase related protein, N-terminal domain SDSE_RS10880 PF00551 Formyl transferase SDSE_RS10885 PF04892 VanZ like family SDSE_RS10890 PF01808 AICARFT/IMPCHase bienzyme SDSE_RS10890 PF02142 MGS-like domain SDSE_RS10895 PF05257 CHAP domain SDSE_RS10900 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain SDSE_RS10900 PF02844 Phosphoribosylglycinamide synthetase, N domain SDSE_RS10900 PF02843 Phosphoribosylglycinamide synthetase, C domain SDSE_RS10905 PF00731 AIR carboxylase SDSE_RS10910 PF02222 ATP-grasp domain SDSE_RS10910 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain SDSE_RS10910 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SDSE_RS10925 PF00206 Lyase SDSE_RS10925 PF10397 Adenylosuccinate lyase C-terminus SDSE_RS10935 PF05491 RuvB C-terminal winged helix domain SDSE_RS10935 PF05496 Holliday junction DNA helicase RuvB P-loop domain SDSE_RS10935 PF17864 RuvB AAA lid domain SDSE_RS10940 PF01451 Low molecular weight phosphotyrosine protein phosphatase SDSE_RS10950 PF01757 Acyltransferase family SDSE_RS10955 PF00171 Aldehyde dehydrogenase family SDSE_RS10955 PF00465 Iron-containing alcohol dehydrogenase SDSE_RS10960 PF00107 Zinc-binding dehydrogenase SDSE_RS10960 PF08240 Alcohol dehydrogenase GroES-like domain SDSE_RS10965 PF00291 Pyridoxal-phosphate dependent enzyme SDSE_RS10975 PF13936 Helix-turn-helix domain SDSE_RS10980 PF00338 Ribosomal protein S10p/S20e SDSE_RS10985 PF00297 Ribosomal protein L3 SDSE_RS10990 PF00573 Ribosomal protein L4/L1 family SDSE_RS10995 PF00276 Ribosomal protein L23 SDSE_RS11000 PF00181 Ribosomal Proteins L2, RNA binding domain SDSE_RS11000 PF03947 Ribosomal Proteins L2, C-terminal domain SDSE_RS11005 PF00203 Ribosomal protein S19 SDSE_RS11010 PF00237 Ribosomal protein L22p/L17e SDSE_RS11015 PF00189 Ribosomal protein S3, C-terminal domain SDSE_RS11015 PF07650 KH domain SDSE_RS11020 PF00252 Ribosomal protein L16p/L10e SDSE_RS11025 PF00831 Ribosomal L29 protein SDSE_RS11030 PF00366 Ribosomal protein S17 SDSE_RS11035 PF00238 Ribosomal protein L14p/L23e SDSE_RS11040 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 SDSE_RS11040 PF00467 KOW motif SDSE_RS11045 PF00673 ribosomal L5P family C-terminus SDSE_RS11045 PF00281 Ribosomal protein L5 SDSE_RS11050 PF00253 Ribosomal protein S14p/S29e SDSE_RS11055 PF00410 Ribosomal protein S8 SDSE_RS11060 PF00347 Ribosomal protein L6 SDSE_RS11065 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast SDSE_RS11070 PF03719 Ribosomal protein S5, C-terminal domain SDSE_RS11070 PF00333 Ribosomal protein S5, N-terminal domain SDSE_RS11075 PF00327 Ribosomal protein L30p/L7e SDSE_RS11080 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A SDSE_RS11085 PF00344 SecY translocase SDSE_RS11095 PF01176 Translation initiation factor 1A / IF-1 SDSE_RS11100 PF00416 Ribosomal protein S13/S18 SDSE_RS11105 PF00411 Ribosomal protein S11 SDSE_RS11110 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain SDSE_RS11110 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain SDSE_RS11110 PF01000 RNA polymerase Rpb3/RpoA insert domain SDSE_RS11115 PF01196 Ribosomal protein L17 SDSE_RS11120 PF13936 Helix-turn-helix domain SDSE_RS11205 PF00293 NUDIX domain SDSE_RS11215 PF07992 Pyridine nucleotide-disulphide oxidoreductase SDSE_RS11220 PF01654 Cytochrome bd terminal oxidase subunit I SDSE_RS11225 PF02322 Cytochrome bd terminal oxidase subunit II SDSE_RS11230 PF00664 ABC transporter transmembrane region SDSE_RS11230 PF00005 ABC transporter SDSE_RS11235 PF00664 ABC transporter transmembrane region SDSE_RS11235 PF00005 ABC transporter SDSE_RS11240 PF00348 Polyprenyl synthetase SDSE_RS11245 PF08544 GHMP kinases C terminal SDSE_RS11245 PF00288 GHMP kinases N terminal domain SDSE_RS11250 PF01047 MarR family SDSE_RS11255 PF00005 ABC transporter SDSE_RS11260 PF00950 ABC 3 transport family SDSE_RS11265 PF01479 S4 domain SDSE_RS11265 PF00579 tRNA synthetases class I (W and Y) SDSE_RS11270 PF00912 Transglycosylase SDSE_RS11270 PF00905 Penicillin binding protein transpeptidase domain SDSE_RS11275 PF04561 RNA polymerase Rpb2, domain 2 SDSE_RS11275 PF04565 RNA polymerase Rpb2, domain 3 SDSE_RS11275 PF10385 RNA polymerase beta subunit external 1 domain SDSE_RS11275 PF04563 RNA polymerase beta subunit SDSE_RS11275 PF00562 RNA polymerase Rpb2, domain 6 SDSE_RS11275 PF04560 RNA polymerase Rpb2, domain 7 SDSE_RS11280 PF04998 RNA polymerase Rpb1, domain 5 SDSE_RS11280 PF05000 RNA polymerase Rpb1, domain 4 SDSE_RS11280 PF00623 RNA polymerase Rpb1, domain 2 SDSE_RS11280 PF04997 RNA polymerase Rpb1, domain 1 SDSE_RS11280 PF04983 RNA polymerase Rpb1, domain 3 SDSE_RS11290 PF00437 Type II/IV secretion system protein SDSE_RS11295 PF00482 Type II secretion system (T2SS), protein F SDSE_RS11300 PF07963 Prokaryotic N-terminal methylation motif SDSE_RS11330 PF00871 Acetokinase family SDSE_RS11340 PF02517 CPBP intramembrane metalloprotease SDSE_RS11350 PF03807 NADP oxidoreductase coenzyme F420-dependent SDSE_RS11350 PF14748 Pyrroline-5-carboxylate reductase dimerisation SDSE_RS11355 PF05343 M42 glutamyl aminopeptidase SDSE_RS11365 PF00085 Thioredoxin SDSE_RS11370 PF14794 Domain of unknown function (DUF4479) SDSE_RS11370 PF01588 Putative tRNA binding domain SDSE_RS11375 PF00436 Single-strand binding protein family SDSE_RS11380 PF01712 Deoxynucleoside kinase SDSE_RS11385 PF01207 Dihydrouridine synthase (Dus) SDSE_RS11390 PF01430 Hsp33 protein SDSE_RS11440 PF01042 Endoribonuclease L-PSP SDSE_RS11460 PF00709 Adenylosuccinate synthetase SDSE_RS11465 PF02608 ABC transporter substrate-binding protein PnrA-like SDSE_RS11470 PF04055 Radical SAM superfamily SDSE_RS11475 PF00455 DeoR C terminal sensor domain SDSE_RS11475 PF08220 DeoR-like helix-turn-helix domain SDSE_RS11480 PF04198 Putative sugar-binding domain SDSE_RS11485 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit SDSE_RS11490 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SDSE_RS11495 PF02378 Phosphotransferase system, EIIC SDSE_RS11500 PF01228 Glycine radical SDSE_RS11500 PF02901 Pyruvate formate lyase-like SDSE_RS11505 PF00923 Transaldolase/Fructose-6-phosphate aldolase SDSE_RS11510 PF00465 Iron-containing alcohol dehydrogenase SDSE_RS11520 PF04608 Phosphatidylglycerophosphatase A SDSE_RS11545 PF13443 Cro/C1-type HTH DNA-binding domain SDSE_RS11560 PF12848 ABC transporter SDSE_RS11560 PF00005 ABC transporter SDSE_RS11560 PF16326 ABC transporter C-terminal domain SDSE_RS11575 PF02545 Maf-like protein SDSE_RS11610 PF00005 ABC transporter SDSE_RS11610 PF00664 ABC transporter transmembrane region SDSE_RS11620 PF04439 Streptomycin adenylyltransferase SDSE_RS11680 PF00005 ABC transporter SDSE_RS11690 PF13683 Integrase core domain SDSE_RS11690 PF01610 Transposase SDSE_RS11700 PF12002 MgsA AAA+ ATPase C terminal SDSE_RS11700 PF05496 Holliday junction DNA helicase RuvB P-loop domain SDSE_RS11700 PF16193 AAA C-terminal domain SDSE_RS11705 PF00117 Glutamine amidotransferase class-I SDSE_RS11710 PF04715 Anthranilate synthase component I, N terminal region SDSE_RS11710 PF00425 chorismate binding enzyme SDSE_RS11715 PF01425 Amidase SDSE_RS11745 PF04452 RNA methyltransferase SDSE_RS11750 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family SDSE_RS11750 PF00356 Bacterial regulatory proteins, lacI family SDSE_RS11755 PF00367 phosphotransferase system, EIIB SDSE_RS11755 PF02378 Phosphotransferase system, EIIC SDSE_RS11755 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 SDSE_RS11760 PF03372 Endonuclease/Exonuclease/phosphatase family SDSE_RS11770 PF05343 M42 glutamyl aminopeptidase SDSE_RS11780 PF01156 Inosine-uridine preferring nucleoside hydrolase SDSE_RS11785 PF07972 NrdI Flavodoxin like SDSE_RS11795 PF04650 YSIRK type signal peptide SDSE_RS11795 PF00746 LPXTG cell wall anchor motif SDSE_RS11800 PF02824 TGS domain SDSE_RS11800 PF04607 Region found in RelA / SpoT proteins SDSE_RS11800 PF13291 ACT domain SDSE_RS11805 PF02580 D-Tyr-tRNA(Tyr) deacylase SDSE_RS11810 PF02821 Staphylokinase/Streptokinase family SDSE_RS11815 PF13556 PucR C-terminal helix-turn-helix domain SDSE_RS11820 PF03459 TOBE domain SDSE_RS11820 PF17912 MalK OB fold domain SDSE_RS11820 PF00005 ABC transporter SDSE_RS11825 PF00128 Alpha amylase, catalytic domain SDSE_RS11830 PF00128 Alpha amylase, catalytic domain SDSE_RS11830 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) SDSE_RS11830 PF17999 Pullulanase N1-terminal domain SDSE_RS11845 PF02699 Preprotein translocase subunit SDSE_RS11850 PF01255 Putative undecaprenyl diphosphate synthase SDSE_RS11860 PF02163 Peptidase family M50 SDSE_RS11860 PF13180 PDZ domain SDSE_RS11865 PF03129 Anticodon binding domain SDSE_RS11865 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SDSE_RS11865 PF04073 Aminoacyl-tRNA editing domain SDSE_RS11875 PF14480 DNA polymerase III polC-type N-terminus I SDSE_RS11875 PF11490 DNA polymerase III polC-type N-terminus II SDSE_RS11875 PF07733 Bacterial DNA polymerase III alpha NTPase domain SDSE_RS11875 PF17657 Bacterial DNA polymerase III alpha subunit finger domain SDSE_RS11875 PF02811 PHP domain SDSE_RS11875 PF00929 Exonuclease SDSE_RS11880 PF01047 MarR family SDSE_RS11885 PF03358 NADPH-dependent FMN reductase SDSE_RS11890 PF01327 Polypeptide deformylase SDSE_RS11905 PF00312 Ribosomal protein S15 SDSE_RS11910 PF05043 Mga helix-turn-helix domain SDSE_RS11910 PF08279 HTH domain SDSE_RS11910 PF00874 PRD domain SDSE_RS11910 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SDSE_RS11910 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SDSE_RS11915 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SDSE_RS11920 PF03611 PTS system sugar-specific permease component SDSE_RS11925 PF00923 Transaldolase/Fructose-6-phosphate aldolase SDSE_RS11930 PF00575 S1 RNA binding domain SDSE_RS11930 PF01138 3' exoribonuclease family, domain 1 SDSE_RS11930 PF03725 3' exoribonuclease family, domain 2 SDSE_RS11930 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain SDSE_RS11930 PF00013 KH domain SDSE_RS11940 PF00132 Bacterial transferase hexapeptide (six repeats) SDSE_RS11940 PF06426 Serine acetyltransferase, N-terminal SDSE_RS11950 PF09190 DALR domain SDSE_RS11950 PF01406 tRNA synthetases class I (C) catalytic domain SDSE_RS11955 PF00636 Ribonuclease III domain SDSE_RS11975 PF08032 RNA 2'-O ribose methyltransferase substrate binding SDSE_RS11975 PF00588 SpoU rRNA Methylase family SDSE_RS11985 PF02645 Uncharacterised protein, DegV family COG1307 SDSE_RS11995 PF01381 Helix-turn-helix SDSE_RS12000 PF13936 Helix-turn-helix domain SDSE_RS12005 PF13936 Helix-turn-helix domain SDSE_RS12010 PF00572 Ribosomal protein L13 SDSE_RS12015 PF00380 Ribosomal protein S9/S16 SDSE_RS12050 PF04604 Type-A lantibiotic SDSE_RS12060 PF00664 ABC transporter transmembrane region SDSE_RS12060 PF03412 Peptidase C39 family SDSE_RS12060 PF00005 ABC transporter SDSE_RS12065 PF00005 ABC transporter SDSE_RS12080 PF00196 Bacterial regulatory proteins, luxR family SDSE_RS12080 PF00072 Response regulator receiver domain SDSE_RS12085 PF13683 Integrase core domain SDSE_RS12085 PF01610 Transposase SDSE_RS12105 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SDSE_RS12105 PF02378 Phosphotransferase system, EIIC SDSE_RS12105 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SDSE_RS12115 PF03611 PTS system sugar-specific permease component SDSE_RS12120 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SDSE_RS12125 PF01116 Fructose-bisphosphate aldolase class-II SDSE_RS12145 PF13936 Helix-turn-helix domain SDSE_RS12185 PF00696 Amino acid kinase family SDSE_RS12185 PF13840 ACT domain SDSE_RS12190 PF01416 tRNA pseudouridine synthase SDSE_RS12195 PF08543 Phosphomethylpyrimidine kinase SDSE_RS12200 PF07155 ECF-type riboflavin transporter, S component SDSE_RS12205 PF04260 Protein of unknown function (DUF436) SDSE_RS12210 PF00924 Mechanosensitive ion channel SDSE_RS12220 PF00128 Alpha amylase, catalytic domain SDSE_RS12220 PF16738 Starch-binding module 26 SDSE_RS12225 PF05697 Bacterial trigger factor protein (TF) SDSE_RS12225 PF05698 Bacterial trigger factor protein (TF) C-terminus SDSE_RS12225 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase SDSE_RS12230 PF05066 HB1, ASXL, restriction endonuclease HTH domain SDSE_RS12235 PF06418 CTP synthase N-terminus SDSE_RS12235 PF00117 Glutamine amidotransferase class-I SDSE_RS12240 PF06580 Histidine kinase SDSE_RS12240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SDSE_RS12240 PF07694 5TMR of 5TMR-LYT SDSE_RS12245 PF04397 LytTr DNA-binding domain SDSE_RS12245 PF00072 Response regulator receiver domain SDSE_RS12250 PF03788 LrgA family SDSE_RS12255 PF04172 LrgB-like family SDSE_RS12270 PF01116 Fructose-bisphosphate aldolase class-II SDSE_RS12275 PF00830 Ribosomal L28 family SDSE_RS12280 PF03780 Asp23 family, cell envelope-related function SDSE_RS12285 PF02734 DAK2 domain SDSE_RS12285 PF13684 Dihydroxyacetone kinase family SDSE_RS12295 PF00005 ABC transporter SDSE_RS12300 PF00528 Binding-protein-dependent transport system inner membrane component SDSE_RS12310 PF02673 Bacitracin resistance protein BacA SDSE_RS12315 PF05389 Negative regulator of genetic competence (MecA) SDSE_RS12320 PF00953 Glycosyl transferase family 4 SDSE_RS12325 PF00005 ABC transporter SDSE_RS12330 PF01458 Uncharacterized protein family (UPF0051) SDSE_RS12335 PF00266 Aminotransferase class-V SDSE_RS12340 PF01592 NifU-like N terminal domain SDSE_RS12345 PF01458 Uncharacterized protein family (UPF0051) SDSE_RS12350 PF07943 Penicillin-binding protein 5, C-terminal domain SDSE_RS12350 PF00768 D-alanyl-D-alanine carboxypeptidase SDSE_RS12355 PF07943 Penicillin-binding protein 5, C-terminal domain SDSE_RS12355 PF00768 D-alanyl-D-alanine carboxypeptidase SDSE_RS12360 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SDSE_RS12365 PF00528 Binding-protein-dependent transport system inner membrane component SDSE_RS12370 PF00528 Binding-protein-dependent transport system inner membrane component SDSE_RS12370 PF12911 N-terminal TM domain of oligopeptide transport permease C SDSE_RS12375 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SDSE_RS12375 PF00005 ABC transporter SDSE_RS12380 PF00005 ABC transporter SDSE_RS12380 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SDSE_RS12385 PF13936 Helix-turn-helix domain SDSE_RS12435 PF01926 50S ribosome-binding GTPase SDSE_RS12440 PF01985 CRS1 / YhbY (CRM) domain SDSE_RS12445 PF01467 Cytidylyltransferase-like SDSE_RS12450 PF01966 HD domain SDSE_RS12465 PF13649 Methyltransferase domain SDSE_RS12470 PF05636 HIGH Nucleotidyl Transferase SDSE_RS12475 PF13411 MerR HTH family regulatory protein SDSE_RS12475 PF07739 TipAS antibiotic-recognition domain SDSE_RS12495 PF04055 Radical SAM superfamily SDSE_RS12495 PF06968 Biotin and Thiamin Synthesis associated domain SDSE_RS12500 PF01709 Transcriptional regulator SDSE_RS12505 PF00497 Bacterial extracellular solute-binding proteins, family 3 SDSE_RS12510 PF03180 NLPA lipoprotein SDSE_RS12515 PF03180 NLPA lipoprotein SDSE_RS12520 PF01546 Peptidase family M20/M25/M40 SDSE_RS12520 PF07687 Peptidase dimerisation domain SDSE_RS12525 PF09383 NIL domain SDSE_RS12525 PF00005 ABC transporter SDSE_RS12530 PF00528 Binding-protein-dependent transport system inner membrane component SDSE_RS12535 PF05525 Branched-chain amino acid transport protein SDSE_RS12540 PF00375 Sodium:dicarboxylate symporter family SDSE_RS12545 PF02080 TrkA-C domain SDSE_RS12545 PF02254 TrkA-N domain SDSE_RS12550 PF02386 Cation transport protein SDSE_RS12555 PF02527 rRNA small subunit methyltransferase G SDSE_RS12560 PF04011 LemA family SDSE_RS12565 PF01435 Peptidase family M48 SDSE_RS12575 PF00072 Response regulator receiver domain SDSE_RS12575 PF00486 Transcriptional regulatory protein, C terminal SDSE_RS12580 PF18719 ArlS sensor domain SDSE_RS12580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SDSE_RS12580 PF00512 His Kinase A (phospho-acceptor) domain SDSE_RS12585 PF03477 ATP cone domain SDSE_RS12595 PF07319 Primosomal protein DnaI N-terminus SDSE_RS12595 PF01695 IstB-like ATP binding protein SDSE_RS12600 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal SDSE_RS12600 PF01926 50S ribosome-binding GTPase SDSE_RS12605 PF00271 Helicase conserved C-terminal domain SDSE_RS12605 PF00176 SNF2 family N-terminal domain SDSE_RS12605 PF12419 SNF2 Helicase protein SDSE_RS12615 PF08245 Mur ligase middle domain SDSE_RS12615 PF02875 Mur ligase family, glutamate ligase domain SDSE_RS12615 PF01225 Mur ligase family, catalytic domain SDSE_RS12625 PF02618 YceG-like family SDSE_RS12630 PF03449 Transcription elongation factor, N-terminal SDSE_RS12630 PF01272 Transcription elongation factor, GreA/GreB, C-term SDSE_RS12635 PF02096 60Kd inner membrane protein SDSE_RS12640 PF00708 Acylphosphatase SDSE_RS12645 PF00588 SpoU rRNA Methylase family SDSE_RS12645 PF08032 RNA 2'-O ribose methyltransferase substrate binding SDSE_RS12655 PF01027 Inhibitor of apoptosis-promoting Bax1 SDSE_RS12660 PF03672 Uncharacterised protein family (UPF0154) SDSE_RS12665 PF01177 Asp/Glu/Hydantoin racemase SDSE_RS12670 PF01725 Ham1 family SDSE_RS12680 PF00005 ABC transporter SDSE_RS12680 PF00571 CBS domain SDSE_RS12690 PF02616 Segregation and condensation protein ScpA SDSE_RS12695 PF04079 Segregation and condensation complex subunit ScpB SDSE_RS12700 PF01479 S4 domain SDSE_RS12700 PF00849 RNA pseudouridylate synthase SDSE_RS12705 PF01809 Putative membrane protein insertion efficiency factor SDSE_RS12710 PF00588 SpoU rRNA Methylase family SDSE_RS12715 PF12822 ECF transporter, substrate-specific component SDSE_RS12720 PF01569 PAP2 superfamily SDSE_RS12725 PF04055 Radical SAM superfamily SDSE_RS12725 PF16199 Radical_SAM C-terminal domain SDSE_RS12730 PF06962 Putative rRNA methylase SDSE_RS12735 PF01595 Cyclin M transmembrane N-terminal domain SDSE_RS12735 PF03471 Transporter associated domain SDSE_RS12735 PF00571 CBS domain SDSE_RS12740 PF04055 Radical SAM superfamily SDSE_RS12745 PF02833 DHHA2 domain SDSE_RS12745 PF01368 DHH family SDSE_RS12755 PF01032 FecCD transport family SDSE_RS12760 PF01032 FecCD transport family SDSE_RS12765 PF01497 Periplasmic binding protein SDSE_RS12770 PF00005 ABC transporter SDSE_RS12775 PF08245 Mur ligase middle domain SDSE_RS12775 PF02875 Mur ligase family, glutamate ligase domain SDSE_RS12780 PF14667 Polysaccharide biosynthesis C-terminal domain SDSE_RS12780 PF01943 Polysaccharide biosynthesis protein SDSE_RS12785 PF13936 Helix-turn-helix domain SDSE_RS12795 PF00574 Clp protease SDSE_RS12810 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) SDSE_RS12815 PF13458 Periplasmic binding protein SDSE_RS12820 PF02653 Branched-chain amino acid transport system / permease component SDSE_RS12825 PF11862 Domain of unknown function (DUF3382) SDSE_RS12825 PF02653 Branched-chain amino acid transport system / permease component SDSE_RS12830 PF12399 Branched-chain amino acid ATP-binding cassette transporter SDSE_RS12830 PF00005 ABC transporter SDSE_RS12835 PF00005 ABC transporter SDSE_RS12840 PF00571 CBS domain SDSE_RS12845 PF02223 Thymidylate kinase SDSE_RS12850 PF09115 DNA polymerase III, delta subunit, C terminal SDSE_RS12855 PF04468 PSP1 C-terminal conserved region SDSE_RS12860 PF06156 Initiation control protein YabA SDSE_RS12865 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases SDSE_RS12875 PF03932 CutC family SDSE_RS12880 PF00266 Aminotransferase class-V SDSE_RS12890 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain SDSE_RS12890 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain SDSE_RS12895 PF03960 ArsC family SDSE_RS12910 PF03372 Endonuclease/Exonuclease/phosphatase family SDSE_RS12920 PF02652 L-lactate permease SDSE_RS12925 PF01070 FMN-dependent dehydrogenase SDSE_RS12945 PF09334 tRNA synthetases class I (M) SDSE_RS12945 PF01588 Putative tRNA binding domain SDSE_RS12950 PF00268 Ribonucleotide reductase, small chain SDSE_RS12955 PF07972 NrdI Flavodoxin like SDSE_RS12960 PF02867 Ribonucleotide reductase, barrel domain SDSE_RS12960 PF00317 Ribonucleotide reductase, all-alpha domain SDSE_RS12960 PF08343 Ribonucleotide reductase N-terminal SDSE_RS12965 PF05525 Branched-chain amino acid transport protein SDSE_RS12995 PF02894 Oxidoreductase family, C-terminal alpha/beta domain SDSE_RS12995 PF01408 Oxidoreductase family, NAD-binding Rossmann fold SDSE_RS13000 PF07690 Major Facilitator Superfamily SDSE_RS13005 PF12804 MobA-like NTP transferase domain SDSE_RS13005 PF00132 Bacterial transferase hexapeptide (six repeats) SDSE_RS13005 PF14602 Hexapeptide repeat of succinyl-transferase SDSE_RS13010 PF00293 NUDIX domain SDSE_RS13020 PF01048 Phosphorylase superfamily SDSE_RS13030 PF01297 Zinc-uptake complex component A periplasmic SDSE_RS13035 PF00005 ABC transporter SDSE_RS13040 PF00950 ABC 3 transport family SDSE_RS13045 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD SDSE_RS13050 PF17854 FtsK alpha domain SDSE_RS13050 PF01580 FtsK/SpoIIIE family SDSE_RS13050 PF09397 Ftsk gamma domain SDSE_RS13060 PF03946 Ribosomal protein L11, N-terminal domain SDSE_RS13060 PF00298 Ribosomal protein L11, RNA binding domain SDSE_RS13065 PF00687 Ribosomal protein L1p/L10e family SDSE_RS13070 PF00696 Amino acid kinase family SDSE_RS13075 PF01765 Ribosome recycling factor SDSE_RS13085 PF01625 Peptide methionine sulfoxide reductase SDSE_RS13090 PF06855 YozE SAM-like fold SDSE_RS13100 PF06100 MCRA family SDSE_RS13105 PF02562 PhoH-like protein SDSE_RS13110 PF03167 Uracil DNA glycosylase superfamily SDSE_RS13115 PF02130 Uncharacterized protein family UPF0054 SDSE_RS13120 PF01219 Prokaryotic diacylglycerol kinase SDSE_RS13125 PF01926 50S ribosome-binding GTPase SDSE_RS13125 PF07650 KH domain SDSE_RS13130 PF00005 ABC transporter SDSE_RS13130 PF03412 Peptidase C39 family SDSE_RS13130 PF00664 ABC transporter transmembrane region SDSE_RS13165 PF04397 LytTr DNA-binding domain SDSE_RS13165 PF00072 Response regulator receiver domain SDSE_RS13215 PF01381 Helix-turn-helix SDSE_RS13220 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain SDSE_RS13220 PF06827 Zinc finger found in FPG and IleRS SDSE_RS13220 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain SDSE_RS13225 PF01121 Dephospho-CoA kinase SDSE_RS13230 PF00005 ABC transporter SDSE_RS13230 PF13732 Domain of unknown function (DUF4162) SDSE_RS13240 PF05872 Bacterial protein of unknown function (DUF853) SDSE_RS13250 PF07690 Major Facilitator Superfamily SDSE_RS13250 PF00083 Sugar (and other) transporter SDSE_RS13260 PF00575 S1 RNA binding domain SDSE_RS13260 PF00773 RNB domain SDSE_RS13260 PF17876 Cold shock domain SDSE_RS13260 PF08206 Ribonuclease B OB domain SDSE_RS13265 PF01668 SmpB protein SDSE_RS13275 PF00535 Glycosyl transferase family 2 SDSE_RS13285 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SDSE_RS13290 PF00881 Nitroreductase family SDSE_RS13295 PF00557 Metallopeptidase family M24 SDSE_RS13295 PF01321 Creatinase/Prolidase N-terminal domain SDSE_RS13300 PF00356 Bacterial regulatory proteins, lacI family SDSE_RS13305 PF00128 Alpha amylase, catalytic domain SDSE_RS13305 PF09154 Domain of unknown function (DUF1939) SDSE_RS13310 PF00534 Glycosyl transferases group 1 SDSE_RS13310 PF13439 Glycosyltransferase Family 4 SDSE_RS13315 PF13439 Glycosyltransferase Family 4 SDSE_RS13315 PF00534 Glycosyl transferases group 1 SDSE_RS13320 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SDSE_RS13320 PF02824 TGS domain SDSE_RS13320 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain SDSE_RS13320 PF03129 Anticodon binding domain SDSE_RS13325 PF00005 ABC transporter SDSE_RS13340 PF02733 Dak1 domain SDSE_RS13350 PF02733 Dak1 domain SDSE_RS13355 PF02734 DAK2 domain SDSE_RS13360 PF03610 PTS system fructose IIA component SDSE_RS13365 PF00230 Major intrinsic protein SDSE_RS13375 PF02803 Thiolase, C-terminal domain SDSE_RS13375 PF00108 Thiolase, N-terminal domain SDSE_RS13390 PF00528 Binding-protein-dependent transport system inner membrane component SDSE_RS13395 PF00528 Binding-protein-dependent transport system inner membrane component SDSE_RS13400 PF00497 Bacterial extracellular solute-binding proteins, family 3 SDSE_RS13405 PF00005 ABC transporter SDSE_RS13410 PF00486 Transcriptional regulatory protein, C terminal SDSE_RS13410 PF00072 Response regulator receiver domain SDSE_RS13415 PF13426 PAS domain SDSE_RS13415 PF00672 HAMP domain SDSE_RS13415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SDSE_RS13415 PF00512 His Kinase A (phospho-acceptor) domain SDSE_RS13420 PF00753 Metallo-beta-lactamase superfamily SDSE_RS13430 PF00035 Double-stranded RNA binding motif SDSE_RS13430 PF14622 Ribonuclease-III-like SDSE_RS13435 PF06470 SMC proteins Flexible Hinge Domain SDSE_RS13435 PF02463 RecF/RecN/SMC N terminal domain SDSE_RS13440 PF02225 PA domain SDSE_RS13440 PF00082 Subtilase family SDSE_RS13440 PF06280 Fn3-like domain SDSE_RS13440 PF00746 LPXTG cell wall anchor motif SDSE_RS13460 PF02881 SRP54-type protein, helical bundle domain SDSE_RS13460 PF00448 SRP54-type protein, GTPase domain SDSE_RS13465 PF07690 Major Facilitator Superfamily SDSE_RS13470 PF03123 CAT RNA binding domain SDSE_RS13470 PF00874 PRD domain SDSE_RS13475 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 SDSE_RS13475 PF02378 Phosphotransferase system, EIIC SDSE_RS13475 PF00367 phosphotransferase system, EIIB SDSE_RS13480 PF00232 Glycosyl hydrolase family 1 SDSE_RS13485 PF09323 Domain of unknown function (DUF1980) SDSE_RS13490 PF03773 Predicted permease SDSE_RS13505 PF00486 Transcriptional regulatory protein, C terminal SDSE_RS13505 PF00072 Response regulator receiver domain SDSE_RS13510 PF16736 Single Cache-like SDSE_RS13510 PF00989 PAS fold SDSE_RS13510 PF00512 His Kinase A (phospho-acceptor) domain SDSE_RS13510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SDSE_RS13515 PF12849 PBP superfamily domain SDSE_RS13520 PF00528 Binding-protein-dependent transport system inner membrane component SDSE_RS13525 PF00528 Binding-protein-dependent transport system inner membrane component SDSE_RS13530 PF00005 ABC transporter SDSE_RS13535 PF01895 PhoU domain SDSE_RS13550 PF09371 Tex-like protein N-terminal domain SDSE_RS13550 PF16921 Tex protein YqgF-like domain SDSE_RS13550 PF00575 S1 RNA binding domain SDSE_RS13550 PF17674 HHH domain SDSE_RS13555 PF10263 SprT-like family SDSE_RS13565 PF07475 HPr Serine kinase C-terminal domain SDSE_RS13565 PF02603 HPr Serine kinase N terminus SDSE_RS13570 PF01790 Prolipoprotein diacylglyceryl transferase SDSE_RS13580 PF12732 YtxH-like protein SDSE_RS13595 PF16325 Peptidase family U32 C-terminal domain SDSE_RS13595 PF01136 Peptidase family U32 SDSE_RS13600 PF02229 Transcriptional Coactivator p15 (PC4) SDSE_RS13620 PF00152 tRNA synthetases class II (D, K and N) SDSE_RS13620 PF01336 OB-fold nucleic acid binding domain SDSE_RS13640 PF04073 Aminoacyl-tRNA editing domain SDSE_RS13645 PF09515 Thiamine transporter protein (Thia_YuaJ) SDSE_RS13675 PF00255 Glutathione peroxidase SDSE_RS13680 PF08439 Oligopeptidase F SDSE_RS13680 PF01432 Peptidase family M3 SDSE_RS13685 PF00311 Phosphoenolpyruvate carboxylase SDSE_RS13690 PF01098 Cell cycle protein SDSE_RS13695 PF04539 Sigma-70 region 3 SDSE_RS13695 PF04542 Sigma-70 region 2 SDSE_RS13695 PF04545 Sigma-70, region 4 SDSE_RS13705 PF03144 Elongation factor Tu domain 2 SDSE_RS13705 PF03143 Elongation factor Tu C-terminal domain SDSE_RS13705 PF00009 Elongation factor Tu GTP binding domain SDSE_RS13720 PF00535 Glycosyl transferase family 2 SDSE_RS13735 PF00121 Triosephosphate isomerase SDSE_RS13740 PF13333 Integrase core domain SDSE_RS13740 PF13276 HTH-like domain SDSE_RS13740 PF00665 Integrase core domain SDSE_RS13770 PF02388 FemAB family SDSE_RS13780 PF01966 HD domain SDSE_RS13790 PF00690 Cation transporter/ATPase, N-terminus SDSE_RS13790 PF00689 Cation transporting ATPase, C-terminus SDSE_RS13800 PF00356 Bacterial regulatory proteins, lacI family SDSE_RS13815 PF03609 PTS system sorbose-specific iic component SDSE_RS13820 PF03830 PTS system sorbose subfamily IIB component SDSE_RS13825 PF07470 Glycosyl Hydrolase Family 88 SDSE_RS13855 PF08124 Polysaccharide lyase family 8, N terminal alpha-helical domain SDSE_RS13855 PF02278 Polysaccharide lyase family 8, super-sandwich domain SDSE_RS13855 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain SDSE_RS13870 PF13683 Integrase core domain SDSE_RS13870 PF01610 Transposase SDSE_RS13880 PF13419 Haloacid dehalogenase-like hydrolase SDSE_RS13885 PF06874 Firmicute fructose-1,6-bisphosphatase SDSE_RS13890 PF08331 Domain of unknown function (DUF1730) SDSE_RS13895 PF00472 RF-1 domain SDSE_RS13895 PF03462 PCRF domain SDSE_RS13900 PF00005 ABC transporter SDSE_RS13905 PF02687 FtsX-like permease family SDSE_RS13905 PF18075 FtsX extracellular domain SDSE_RS13910 PF00753 Metallo-beta-lactamase superfamily SDSE_RS13915 PF04851 Type III restriction enzyme, res subunit SDSE_RS13915 PF13307 Helicase C-terminal domain SDSE_RS13915 PF00929 Exonuclease SDSE_RS13920 PF00155 Aminotransferase class I and II SDSE_RS13925 PF00152 tRNA synthetases class II (D, K and N) SDSE_RS13925 PF01336 OB-fold nucleic acid binding domain SDSE_RS13935 PF03668 P-loop ATPase protein family SDSE_RS13940 PF01933 Uncharacterised protein family UPF0052 SDSE_RS13945 PF02650 WhiA C-terminal HTH domain SDSE_RS13945 PF10298 WhiA N-terminal LAGLIDADG-like domain SDSE_RS13945 PF14527 WhiA LAGLIDADG-like domain SDSE_RS13950 PF03577 Peptidase family C69 SDSE_RS13955 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment SDSE_RS13955 PF01297 Zinc-uptake complex component A periplasmic SDSE_RS13960 PF07702 UTRA domain SDSE_RS13960 PF00392 Bacterial regulatory proteins, gntR family SDSE_RS13965 PF01380 SIS domain SDSE_RS13970 PF01791 DeoC/LacD family aldolase SDSE_RS13975 PF00392 Bacterial regulatory proteins, gntR family SDSE_RS13980 PF01301 Glycosyl hydrolases family 35 SDSE_RS13985 PF03610 PTS system fructose IIA component SDSE_RS13985 PF03830 PTS system sorbose subfamily IIB component SDSE_RS13990 PF03609 PTS system sorbose-specific iic component SDSE_RS13995 PF03613 PTS system mannose/fructose/sorbose family IID component SDSE_RS14005 PF01197 Ribosomal protein L31 SDSE_RS14010 PF13936 Helix-turn-helix domain SDSE_RS14015 PF13936 Helix-turn-helix domain SDSE_RS14020 PF02272 DHHA1 domain SDSE_RS14020 PF01368 DHH family SDSE_RS14025 PF13673 Acetyltransferase (GNAT) domain SDSE_RS14030 PF02798 Glutathione S-transferase, N-terminal domain SDSE_RS14035 PF00962 Adenosine/AMP deaminase SDSE_RS14040 PF00258 Flavodoxin SDSE_RS14050 PF00654 Voltage gated chloride channel SDSE_RS14055 PF01245 Ribosomal protein L19 SDSE_RS14065 PF01098 Cell cycle protein SDSE_RS14075 PF00986 DNA gyrase B subunit, carboxyl terminus SDSE_RS14075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SDSE_RS14075 PF00204 DNA gyrase B SDSE_RS14075 PF01751 Toprim domain SDSE_RS14080 PF06160 Septation ring formation regulator, EzrA SDSE_RS14095 PF00113 Enolase, C-terminal TIM barrel domain SDSE_RS14095 PF03952 Enolase, N-terminal domain SDSE_RS14125 PF00005 ABC transporter SDSE_RS14145 PF06177 QueT transporter SDSE_RS14150 PF03120 NAD-dependent DNA ligase OB-fold domain SDSE_RS14150 PF01653 NAD-dependent DNA ligase adenylation domain SDSE_RS14150 PF00533 BRCA1 C Terminus (BRCT) domain SDSE_RS14150 PF12826 Helix-hairpin-helix motif SDSE_RS14150 PF03119 NAD-dependent DNA ligase C4 zinc finger domain SDSE_RS14155 PF00781 Diacylglycerol kinase catalytic domain SDSE_RS14160 PF00128 Alpha amylase, catalytic domain SDSE_RS14160 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) SDSE_RS14160 PF17999 Pullulanase N1-terminal domain SDSE_RS14165 PF00128 Alpha amylase, catalytic domain SDSE_RS14165 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) SDSE_RS14165 PF02806 Alpha amylase, C-terminal all-beta domain SDSE_RS14170 PF00483 Nucleotidyl transferase SDSE_RS14170 PF00132 Bacterial transferase hexapeptide (six repeats) SDSE_RS14175 PF00483 Nucleotidyl transferase SDSE_RS14180 PF08323 Starch synthase catalytic domain SDSE_RS14180 PF00534 Glycosyl transferases group 1 SDSE_RS14185 PF00137 ATP synthase subunit C SDSE_RS14190 PF00119 ATP synthase A chain SDSE_RS14195 PF00430 ATP synthase B/B' CF(0) SDSE_RS14200 PF00213 ATP synthase delta (OSCP) subunit SDSE_RS14205 PF00306 ATP synthase alpha/beta chain, C terminal domain SDSE_RS14205 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SDSE_RS14205 PF02874 ATP synthase alpha/beta family, beta-barrel domain SDSE_RS14210 PF00231 ATP synthase SDSE_RS14215 PF02874 ATP synthase alpha/beta family, beta-barrel domain SDSE_RS14215 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SDSE_RS14220 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain SDSE_RS14220 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain SDSE_RS14230 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) SDSE_RS14240 PF01223 DNA/RNA non-specific endonuclease SDSE_RS14245 PF01409 tRNA synthetases class II core domain (F) SDSE_RS14245 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain SDSE_RS14250 PF03483 B3/4 domain SDSE_RS14250 PF03484 tRNA synthetase B5 domain SDSE_RS14250 PF03147 Ferredoxin-fold anticodon binding domain SDSE_RS14250 PF01588 Putative tRNA binding domain SDSE_RS14250 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain SDSE_RS14265 PF02687 FtsX-like permease family SDSE_RS14270 PF00005 ABC transporter SDSE_RS14275 PF04228 Putative neutral zinc metallopeptidase SDSE_RS14280 PF12705 PD-(D/E)XK nuclease superfamily SDSE_RS14285 PF13361 UvrD-like helicase C-terminal domain SDSE_RS14285 PF12705 PD-(D/E)XK nuclease superfamily SDSE_RS14285 PF00580 UvrD/REP helicase N-terminal domain SDSE_RS14290 PF00155 Aminotransferase class I and II SDSE_RS14295 PF00497 Bacterial extracellular solute-binding proteins, family 3 SDSE_RS14300 PF01165 Ribosomal protein S21 SDSE_RS14305 PF01741 Large-conductance mechanosensitive channel, MscL SDSE_RS14310 PF01807 CHC2 zinc finger SDSE_RS14310 PF10410 DnaB-helicase binding domain of primase SDSE_RS14310 PF08275 DNA primase catalytic core, N-terminal domain SDSE_RS14315 PF04539 Sigma-70 region 3 SDSE_RS14315 PF03979 Sigma-70 factor, region 1.1 SDSE_RS14315 PF04542 Sigma-70 region 2 SDSE_RS14315 PF00140 Sigma-70 factor, region 1.2 SDSE_RS14315 PF04545 Sigma-70, region 4 SDSE_RS14320 PF01883 Iron-sulfur cluster assembly protein SDSE_RS14325 PF04321 RmlD substrate binding domain SDSE_RS14335 PF00535 Glycosyl transferase family 2 SDSE_RS14335 PF01501 Glycosyl transferase family 8 SDSE_RS14345 PF00005 ABC transporter SDSE_RS14350 PF00535 Glycosyl transferase family 2 SDSE_RS14365 PF00535 Glycosyl transferase family 2 SDSE_RS14385 PF01546 Peptidase family M20/M25/M40 SDSE_RS14385 PF07687 Peptidase dimerisation domain SDSE_RS14405 PF02224 Cytidylate kinase SDSE_RS14410 PF05198 Translation initiation factor IF-3, N-terminal domain SDSE_RS14410 PF00707 Translation initiation factor IF-3, C-terminal domain SDSE_RS14415 PF01632 Ribosomal protein L35 SDSE_RS14420 PF00453 Ribosomal protein L20 SDSE_RS14425 PF00884 Sulfatase SDSE_RS14430 PF17785 PUA-like domain SDSE_RS14430 PF10672 S-adenosylmethionine-dependent methyltransferase SDSE_RS14435 PF01487 Type I 3-dehydroquinase SDSE_RS14440 PF01264 Chorismate synthase SDSE_RS14445 PF06133 Control of competence regulator ComK, YlbF/YmcA SDSE_RS14450 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SDSE_RS14450 PF07992 Pyridine nucleotide-disulphide oxidoreductase SDSE_RS14455 PF08245 Mur ligase middle domain SDSE_RS14455 PF02875 Mur ligase family, glutamate ligase domain SDSE_RS14465 PF00266 Aminotransferase class-V SDSE_RS14470 PF02568 Thiamine biosynthesis protein (ThiI) SDSE_RS14470 PF02926 THUMP domain SDSE_RS14475 PF09587 Bacterial capsule synthesis protein PGA_cap SDSE_RS14485 PF00829 Ribosomal prokaryotic L21 protein SDSE_RS14495 PF01016 Ribosomal L27 protein SDSE_RS14500 PF03466 LysR substrate binding domain SDSE_RS14500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SDSE_RS14505 PF01252 Signal peptidase (SPase) II SDSE_RS14510 PF01479 S4 domain SDSE_RS14510 PF00849 RNA pseudouridylate synthase SDSE_RS14520 PF00156 Phosphoribosyl transferase domain SDSE_RS14525 PF00860 Permease family SDSE_RS14530 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain SDSE_RS14530 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain SDSE_RS14535 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain SDSE_RS14535 PF00117 Glutamine amidotransferase class-I SDSE_RS14540 PF02142 MGS-like domain SDSE_RS14540 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain SDSE_RS14540 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain SDSE_RS14545 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion SDSE_RS14550 PF00005 ABC transporter SDSE_RS14555 PF12704 MacB-like periplasmic core domain SDSE_RS14555 PF02687 FtsX-like permease family SDSE_RS14565 PF03009 Glycerophosphoryl diester phosphodiesterase family SDSE_RS14570 PF00886 Ribosomal protein S16 SDSE_RS14585 PF01782 RimM N-terminal domain SDSE_RS14585 PF05239 PRC-barrel domain SDSE_RS14590 PF01746 tRNA (Guanine-1)-methyltransferase SDSE_RS14595 PF07992 Pyridine nucleotide-disulphide oxidoreductase SDSE_RS14605 PF02558 Ketopantoate reductase PanE/ApbA SDSE_RS14605 PF08546 Ketopantoate reductase PanE/ApbA C terminal SDSE_RS14610 PF08220 DeoR-like helix-turn-helix domain SDSE_RS14610 PF00455 DeoR C terminal sensor domain SDSE_RS14615 PF00294 pfkB family carbohydrate kinase SDSE_RS14620 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SDSE_RS14620 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SDSE_RS14625 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase SDSE_RS14625 PF01476 LysM domain SDSE_RS14630 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase SDSE_RS14630 PF01476 LysM domain SDSE_RS14645 PF02645 Uncharacterised protein, DegV family COG1307 SDSE_RS14650 PF01743 Poly A polymerase head domain SDSE_RS14650 PF13735 tRNA nucleotidyltransferase domain 2 putative SDSE_RS14650 PF12627 Probable RNA and SrmB- binding site of polymerase A SDSE_RS14655 PF00005 ABC transporter SDSE_RS14655 PF16326 ABC transporter C-terminal domain SDSE_RS14655 PF12848 ABC transporter SDSE_RS14660 PF00005 ABC transporter SDSE_RS14660 PF00664 ABC transporter transmembrane region SDSE_RS14665 PF00664 ABC transporter transmembrane region SDSE_RS14665 PF00005 ABC transporter SDSE_RS14670 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase SDSE_RS14670 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain SDSE_RS14675 PF01327 Polypeptide deformylase SDSE_RS14680 PF02872 5'-nucleotidase, C-terminal domain SDSE_RS14680 PF17936 Bacterial Ig domain SDSE_RS14680 PF00149 Calcineurin-like phosphoesterase SDSE_RS14690 PF00005 ABC transporter SDSE_RS14690 PF00664 ABC transporter transmembrane region SDSE_RS14695 PF00005 ABC transporter SDSE_RS14695 PF00664 ABC transporter transmembrane region SDSE_RS14700 PF08544 GHMP kinases C terminal SDSE_RS14700 PF10509 Galactokinase galactose-binding signature SDSE_RS14700 PF00288 GHMP kinases N terminal domain SDSE_RS14710 PF00288 GHMP kinases N terminal domain SDSE_RS14710 PF08544 GHMP kinases C terminal SDSE_RS14715 PF01070 FMN-dependent dehydrogenase SDSE_RS14740 PF00368 Hydroxymethylglutaryl-coenzyme A reductase SDSE_RS14745 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal SDSE_RS14745 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal SDSE_RS14750 PF00303 Thymidylate synthase SDSE_RS14755 PF00186 Dihydrofolate reductase SDSE_RS14765 PF07724 AAA domain (Cdc48 subfamily) SDSE_RS14765 PF10431 C-terminal, D2-small domain, of ClpB protein SDSE_RS14765 PF06689 ClpX C4-type zinc finger SDSE_RS14770 PF01926 50S ribosome-binding GTPase SDSE_RS14780 PF00004 ATPase family associated with various cellular activities (AAA) SDSE_RS14780 PF10431 C-terminal, D2-small domain, of ClpB protein SDSE_RS14780 PF17871 AAA lid domain SDSE_RS14780 PF07724 AAA domain (Cdc48 subfamily) SDSE_RS14795 PF00466 Ribosomal protein L10 SDSE_RS14800 PF16320 Ribosomal protein L7/L12 dimerisation domain SDSE_RS14800 PF00542 Ribosomal protein L7/L12 C-terminal domain SDSE_RS14805 PF00768 D-alanyl-D-alanine carboxypeptidase SDSE_RS14805 PF07943 Penicillin-binding protein 5, C-terminal domain SDSE_RS14810 PF01522 Polysaccharide deacetylase SDSE_RS14815 PF03447 Homoserine dehydrogenase, NAD binding domain SDSE_RS14815 PF00742 Homoserine dehydrogenase SDSE_RS14820 PF08544 GHMP kinases C terminal SDSE_RS14820 PF00288 GHMP kinases N terminal domain SDSE_RS14825 PF08245 Mur ligase middle domain SDSE_RS14825 PF02875 Mur ligase family, glutamate ligase domain SDSE_RS14830 PF01227 GTP cyclohydrolase I SDSE_RS14835 PF00809 Pterin binding enzyme SDSE_RS14840 PF02152 Dihydroneopterin aldolase SDSE_RS14845 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) SDSE_RS14850 PF01565 FAD binding domain SDSE_RS14850 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain SDSE_RS14855 PF08402 TOBE domain SDSE_RS14855 PF00005 ABC transporter SDSE_RS14860 PF00528 Binding-protein-dependent transport system inner membrane component SDSE_RS14865 PF00528 Binding-protein-dependent transport system inner membrane component SDSE_RS14870 PF13416 Bacterial extracellular solute-binding protein SDSE_RS14875 PF00072 Response regulator receiver domain SDSE_RS14880 PF00989 PAS fold SDSE_RS14880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SDSE_RS14880 PF17203 Single cache domain 3 SDSE_RS14880 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain SDSE_RS14885 PF03390 2-hydroxycarboxylate transporter family SDSE_RS14890 PF00390 Malic enzyme, N-terminal domain SDSE_RS14890 PF03949 Malic enzyme, NAD binding domain SDSE_RS14895 PF00654 Voltage gated chloride channel SDSE_RS14900 PF12833 Helix-turn-helix domain SDSE_RS14900 PF02311 AraC-like ligand binding domain SDSE_RS14910 PF01594 AI-2E family transporter SDSE_RS14915 PF04002 RadC-like JAB domain SDSE_RS14920 PF07722 Peptidase C26 SDSE_RS14925 PF06971 Putative DNA-binding protein N-terminus SDSE_RS14925 PF02629 CoA binding domain SDSE_RS14940 PF00266 Aminotransferase class-V SDSE_RS14945 PF14572 Phosphoribosyl synthetase-associated domain SDSE_RS14945 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase SDSE_RS14955 PF04607 Region found in RelA / SpoT proteins SDSE_RS14960 PF01513 ATP-NAD kinase SDSE_RS14965 PF00849 RNA pseudouridylate synthase SDSE_RS14970 PF01515 Phosphate acetyl/butaryl transferase SDSE_RS14975 PF00106 short chain dehydrogenase SDSE_RS14985 PF00005 ABC transporter SDSE_RS14985 PF00571 CBS domain SDSE_RS14990 PF00528 Binding-protein-dependent transport system inner membrane component SDSE_RS14995 PF00478 IMP dehydrogenase / GMP reductase domain SDSE_RS15000 PF00156 Phosphoribosyl transferase domain SDSE_RS15005 PF00860 Permease family SDSE_RS15010 PF02424 ApbE family SDSE_RS15015 PF01361 Tautomerase enzyme SDSE_RS15020 PF00265 Thymidine kinase SDSE_RS15025 PF03462 PCRF domain SDSE_RS15025 PF00472 RF-1 domain SDSE_RS15030 PF05175 Methyltransferase small domain SDSE_RS15035 PF01300 Telomere recombination SDSE_RS15045 PF00464 Serine hydroxymethyltransferase SDSE_RS15060 PF00005 ABC transporter SDSE_RS15060 PF00664 ABC transporter transmembrane region SDSE_RS15065 PF00005 ABC transporter SDSE_RS15065 PF00664 ABC transporter transmembrane region SDSE_RS15070 PF07992 Pyridine nucleotide-disulphide oxidoreductase SDSE_RS15070 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SDSE_RS15075 PF01872 RibD C-terminal domain SDSE_RS15080 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain SDSE_RS15080 PF00056 lactate/malate dehydrogenase, NAD binding domain SDSE_RS15085 PF00521 DNA gyrase/topoisomerase IV, subunit A SDSE_RS15085 PF03989 DNA gyrase C-terminal domain, beta-propeller SDSE_RS15090 PF04203 Sortase domain SDSE_RS15095 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SDSE_RS15135 PF00005 ABC transporter SDSE_RS15140 PF02687 FtsX-like permease family SDSE_RS15140 PF12704 MacB-like periplasmic core domain SDSE_RS15145 PF00486 Transcriptional regulatory protein, C terminal SDSE_RS15145 PF00072 Response regulator receiver domain SDSE_RS15150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SDSE_RS15150 PF00512 His Kinase A (phospho-acceptor) domain SDSE_RS15150 PF02702 Osmosensitive K+ channel His kinase sensor domain SDSE_RS15150 PF13493 Domain of unknown function (DUF4118) SDSE_RS15155 PF05257 CHAP domain SDSE_RS15155 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase SDSE_RS15175 PF00082 Subtilase family SDSE_RS15175 PF06280 Fn3-like domain SDSE_RS15175 PF02225 PA domain SDSE_RS15180 PF01297 Zinc-uptake complex component A periplasmic SDSE_RS15190 PF05532 CsbD-like SDSE_RS15195 PF00005 ABC transporter SDSE_RS15200 PF00005 ABC transporter SDSE_RS15200 PF12558 ATP-binding cassette cobalt transporter SDSE_RS15205 PF00528 Binding-protein-dependent transport system inner membrane component SDSE_RS15210 PF00528 Binding-protein-dependent transport system inner membrane component SDSE_RS15215 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SDSE_RS15230 PF00999 Sodium/hydrogen exchanger family SDSE_RS15235 PF00958 GMP synthase C terminal domain SDSE_RS15235 PF00117 Glutamine amidotransferase class-I SDSE_RS15235 PF02540 NAD synthase SDSE_RS15245 PF00392 Bacterial regulatory proteins, gntR family SDSE_RS15245 PF07702 UTRA domain SDSE_RS15250 PF04297 Putative helix-turn-helix protein, YlxM / p13 like SDSE_RS15255 PF02978 Signal peptide binding domain SDSE_RS15255 PF00448 SRP54-type protein, GTPase domain SDSE_RS15255 PF02881 SRP54-type protein, helical bundle domain SDSE_RS15280 PF16736 Single Cache-like SDSE_RS15280 PF00512 His Kinase A (phospho-acceptor) domain SDSE_RS15280 PF00989 PAS fold SDSE_RS15280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SDSE_RS15285 PF07883 Cupin domain SDSE_RS15295 PF00589 Phage integrase family SDSE_RS15295 PF13495 Phage integrase, N-terminal SAM-like domain SDSE_RS15310 PF02424 ApbE family SDSE_RS15320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SDSE_RS15325 PF00486 Transcriptional regulatory protein, C terminal SDSE_RS15325 PF00072 Response regulator receiver domain SDSE_RS15335 PF00005 ABC transporter SDSE_RS15340 PF03572 Peptidase family S41 SDSE_RS15350 PF08218 Citrate lyase ligase C-terminal domain SDSE_RS15355 PF00364 Biotin-requiring enzyme SDSE_RS15355 PF02436 Conserved carboxylase domain SDSE_RS15355 PF00682 HMGL-like SDSE_RS15365 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase SDSE_RS15370 PF04223 Citrate lyase, alpha subunit (CitF) SDSE_RS15375 PF03328 HpcH/HpaI aldolase/citrate lyase family SDSE_RS15380 PF06857 Malonate decarboxylase delta subunit (MdcD) SDSE_RS15390 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit SDSE_RS15395 PF00364 Biotin-requiring enzyme SDSE_RS15405 PF03600 Citrate transporter SDSE_RS15415 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase SDSE_RS15425 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit SDSE_RS15430 PF00364 Biotin-requiring enzyme SDSE_RS15440 PF02436 Conserved carboxylase domain SDSE_RS15440 PF00364 Biotin-requiring enzyme SDSE_RS15440 PF00682 HMGL-like SDSE_RS15445 PF01134 Glucose inhibited division protein A SDSE_RS15475 PF01751 Toprim domain SDSE_RS15475 PF01131 DNA topoisomerase SDSE_RS15475 PF01396 Topoisomerase DNA binding C4 zinc finger SDSE_RS15480 PF18255 DNA processing protein A sterile alpha motif domain SDSE_RS15480 PF02481 DNA recombination-mediator protein A SDSE_RS15485 PF01351 Ribonuclease HII SDSE_RS15490 PF01926 50S ribosome-binding GTPase SDSE_RS15500 PF01381 Helix-turn-helix SDSE_RS15510 PF03006 Haemolysin-III related SDSE_RS15525 PF05532 CsbD-like SDSE_RS15530 PF12848 ABC transporter SDSE_RS15530 PF00005 ABC transporter SDSE_RS15535 PF02821 Staphylokinase/Streptokinase family SDSE_RS15550 PF00392 Bacterial regulatory proteins, gntR family SDSE_RS15550 PF00155 Aminotransferase class I and II SDSE_RS15555 PF03477 ATP cone domain SDSE_RS15555 PF13597 Anaerobic ribonucleoside-triphosphate reductase SDSE_RS15560 PF01118 Semialdehyde dehydrogenase, NAD binding domain SDSE_RS15560 PF02774 Semialdehyde dehydrogenase, dimerisation domain SDSE_RS15565 PF13091 PLD-like domain SDSE_RS15585 PF13683 Integrase core domain SDSE_RS15585 PF01610 Transposase SDSE_RS15600 PF01268 Formate--tetrahydrofolate ligase SDSE_RS15605 PF03099 Biotin/lipoate A/B protein ligase family SDSE_RS15605 PF10437 Bacterial lipoate protein ligase C-terminus SDSE_RS15615 PF01661 Macro domain SDSE_RS15620 PF01597 Glycine cleavage H-protein SDSE_RS15625 PF00724 NADH:flavin oxidoreductase / NADH oxidase family SDSE_RS15630 PF03099 Biotin/lipoate A/B protein ligase family SDSE_RS15635 PF02441 Flavoprotein SDSE_RS15635 PF04127 DNA / pantothenate metabolism flavoprotein SDSE_RS15640 PF02441 Flavoprotein SDSE_RS15645 PF12822 ECF transporter, substrate-specific component SDSE_RS15650 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II SDSE_RS15650 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I SDSE_RS15650 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain SDSE_RS15650 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III SDSE_RS15655 PF02653 Branched-chain amino acid transport system / permease component SDSE_RS15660 PF02653 Branched-chain amino acid transport system / permease component SDSE_RS15665 PF00005 ABC transporter SDSE_RS15670 PF02608 ABC transporter substrate-binding protein PnrA-like SDSE_RS15675 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region SDSE_RS15680 PF01791 DeoC/LacD family aldolase SDSE_RS15685 PF00591 Glycosyl transferase family, a/b domain SDSE_RS15685 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain SDSE_RS15685 PF02885 Glycosyl transferase family, helical bundle domain SDSE_RS15690 PF05175 Methyltransferase small domain SDSE_RS15695 PF00485 Phosphoribulokinase / Uridine kinase family SDSE_RS15700 PF01649 Ribosomal protein S20 SDSE_RS15705 PF00512 His Kinase A (phospho-acceptor) domain SDSE_RS15705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SDSE_RS15710 PF00486 Transcriptional regulatory protein, C terminal SDSE_RS15710 PF00072 Response regulator receiver domain SDSE_RS15715 PF11838 ERAP1-like C-terminal domain SDSE_RS15715 PF01433 Peptidase family M1 domain SDSE_RS15720 PF01895 PhoU domain SDSE_RS15725 PF00005 ABC transporter SDSE_RS15730 PF00005 ABC transporter SDSE_RS15735 PF00528 Binding-protein-dependent transport system inner membrane component SDSE_RS15740 PF00528 Binding-protein-dependent transport system inner membrane component SDSE_RS15745 PF12849 PBP superfamily domain SDSE_RS15750 PF01189 16S rRNA methyltransferase RsmB/F SDSE_RS15750 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF SDSE_RS15750 PF17126 RsmF rRNA methyltransferase first C-terminal domain SDSE_RS15755 PF00459 Inositol monophosphatase family SDSE_RS15760 PF05256 Uncharacterised protein family (UPF0223) SDSE_RS15765 PF03960 ArsC family SDSE_RS15770 PF06574 FAD synthetase SDSE_RS15770 PF01687 Riboflavin kinase SDSE_RS15800 PF02687 FtsX-like permease family SDSE_RS15800 PF00005 ABC transporter SDSE_RS15800 PF12704 MacB-like periplasmic core domain SDSE_RS15815 PF03780 Asp23 family, cell envelope-related function SDSE_RS15820 PF05532 CsbD-like SDSE_RS15825 PF03780 Asp23 family, cell envelope-related function SDSE_RS15840 PF04226 Transglycosylase associated protein SDSE_RS15845 PF13936 Helix-turn-helix domain SDSE_RS15850 PF00580 UvrD/REP helicase N-terminal domain SDSE_RS15850 PF13361 UvrD-like helicase C-terminal domain SDSE_RS15855 PF01235 Sodium:alanine symporter family SDSE_RS15860 PF16916 Dimerisation domain of Zinc Transporter SDSE_RS15860 PF01545 Cation efflux family SDSE_RS15870 PF00497 Bacterial extracellular solute-binding proteins, family 3 SDSE_RS15875 PF00005 ABC transporter SDSE_RS15880 PF00528 Binding-protein-dependent transport system inner membrane component SDSE_RS15885 PF03831 PhnA domain SDSE_RS15885 PF08274 PhnA Zinc-Ribbon SDSE_RS15890 PF01380 SIS domain SDSE_RS15895 PF10502 Signal peptidase, peptidase S26 SDSE_RS15900 PF02887 Pyruvate kinase, alpha/beta domain SDSE_RS15900 PF00224 Pyruvate kinase, barrel domain SDSE_RS15905 PF00365 Phosphofructokinase SDSE_RS15910 PF07733 Bacterial DNA polymerase III alpha NTPase domain SDSE_RS15910 PF17657 Bacterial DNA polymerase III alpha subunit finger domain SDSE_RS15910 PF14579 Helix-hairpin-helix motif SDSE_RS15910 PF02811 PHP domain SDSE_RS15910 PF01336 OB-fold nucleic acid binding domain SDSE_RS15915 PF00392 Bacterial regulatory proteins, gntR family SDSE_RS15920 PF00005 ABC transporter SDSE_RS15930 PF09335 SNARE associated Golgi protein SDSE_RS15950 PF00575 S1 RNA binding domain SDSE_RS15970 PF01063 Amino-transferase class IV SDSE_RS15975 PF13936 Helix-turn-helix domain SDSE_RS15980 PF00521 DNA gyrase/topoisomerase IV, subunit A SDSE_RS15980 PF03989 DNA gyrase C-terminal domain, beta-propeller SDSE_RS15990 PF01751 Toprim domain SDSE_RS15990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SDSE_RS15990 PF00986 DNA gyrase B subunit, carboxyl terminus SDSE_RS15990 PF00204 DNA gyrase B SDSE_RS15995 PF02660 Glycerol-3-phosphate acyltransferase SDSE_RS16000 PF01979 Amidohydrolase family SDSE_RS16005 PF03167 Uracil DNA glycosylase superfamily SDSE_RS16010 PF00528 Binding-protein-dependent transport system inner membrane component SDSE_RS16015 PF00497 Bacterial extracellular solute-binding proteins, family 3 SDSE_RS16020 PF01425 Amidase SDSE_RS16025 PF13333 Integrase core domain SDSE_RS16025 PF00665 Integrase core domain SDSE_RS16025 PF13276 HTH-like domain SDSE_RS16035 PF00156 Phosphoribosyl transferase domain SDSE_RS16040 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family SDSE_RS16050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SDSE_RS16050 PF03466 LysR substrate binding domain SDSE_RS16060 PF01048 Phosphorylase superfamily SDSE_RS16065 PF01048 Phosphorylase superfamily SDSE_RS16070 PF03960 ArsC family SDSE_RS16075 PF01676 Metalloenzyme superfamily SDSE_RS16080 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) SDSE_RS16085 PF10396 GTP-binding protein TrmE N-terminus SDSE_RS16085 PF12631 MnmE helical domain SDSE_RS16085 PF01926 50S ribosome-binding GTPase SDSE_RS16090 PF01546 Peptidase family M20/M25/M40 SDSE_RS16095 PF00881 Nitroreductase family SDSE_RS16100 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SDSE_RS16100 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SDSE_RS16100 PF00205 Thiamine pyrophosphate enzyme, central domain SDSE_RS16115 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SDSE_RS16115 PF00205 Thiamine pyrophosphate enzyme, central domain SDSE_RS16115 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SDSE_RS16120 PF02151 UvrB/uvrC motif SDSE_RS16120 PF08459 UvrC Helix-hairpin-helix N-terminal SDSE_RS16120 PF01541 GIY-YIG catalytic domain SDSE_RS16130 PF00171 Aldehyde dehydrogenase family SDSE_RS16135 PF13419 Haloacid dehalogenase-like hydrolase SDSE_RS16145 PF03773 Predicted permease SDSE_RS16155 PF14602 Hexapeptide repeat of succinyl-transferase SDSE_RS16155 PF12464 Maltose acetyltransferase SDSE_RS16155 PF00132 Bacterial transferase hexapeptide (six repeats) SDSE_RS16160 PF13419 Haloacid dehalogenase-like hydrolase SDSE_RS16175 PF12833 Helix-turn-helix domain SDSE_RS16175 PF00072 Response regulator receiver domain SDSE_RS16180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SDSE_RS16180 PF06580 Histidine kinase SDSE_RS16185 PF03613 PTS system mannose/fructose/sorbose family IID component SDSE_RS16190 PF03609 PTS system sorbose-specific iic component SDSE_RS16195 PF03830 PTS system sorbose subfamily IIB component SDSE_RS16205 PF03601 Conserved hypothetical protein 698 SDSE_RS16220 PF01721 Class II bacteriocin SDSE_RS16230 PF01641 SelR domain SDSE_RS16235 PF03144 Elongation factor Tu domain 2 SDSE_RS16235 PF00679 Elongation factor G C-terminus SDSE_RS16235 PF14492 Elongation Factor G, domain II SDSE_RS16235 PF00009 Elongation factor Tu GTP binding domain SDSE_RS16235 PF06421 GTP-binding protein LepA C-terminus SDSE_RS16240 PF00334 Nucleoside diphosphate kinase SDSE_RS16255 PF09711 CRISPR-associated protein (Cas_Csn2) SDSE_RS16260 PF09827 CRISPR associated protein Cas2 SDSE_RS16265 PF01867 CRISPR associated protein Cas1 SDSE_RS16270 PF16593 Bridge helix of CRISPR-associated endonuclease Cas9 SDSE_RS16270 PF16592 REC lobe of CRISPR-associated endonuclease Cas9 SDSE_RS16270 PF13395 HNH endonuclease SDSE_RS16270 PF16595 PAM-interacting domain of CRISPR-associated endonuclease Cas9 SDSE_RS16280 PF13344 Haloacid dehalogenase-like hydrolase SDSE_RS16290 PF06969 HemN C-terminal domain SDSE_RS16290 PF04055 Radical SAM superfamily SDSE_RS16300 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain SDSE_RS16300 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I SDSE_RS16300 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III SDSE_RS16300 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II SDSE_RS16310 PF02457 DisA bacterial checkpoint controller nucleotide-binding SDSE_RS16315 PF08353 Domain of unknown function (DUF1727) SDSE_RS16315 PF08245 Mur ligase middle domain SDSE_RS16320 PF07685 CobB/CobQ-like glutamine amidotransferase domain SDSE_RS16325 PF10437 Bacterial lipoate protein ligase C-terminus SDSE_RS16325 PF03099 Biotin/lipoate A/B protein ligase family SDSE_RS16335 PF10400 Virulence activator alpha C-term SDSE_RS16335 PF03551 Transcriptional regulator PadR-like family SDSE_RS16340 PF07992 Pyridine nucleotide-disulphide oxidoreductase SDSE_RS16340 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SDSE_RS16350 PF02817 e3 binding domain SDSE_RS16350 PF00364 Biotin-requiring enzyme SDSE_RS16350 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) SDSE_RS16355 PF02780 Transketolase, C-terminal domain SDSE_RS16355 PF00364 Biotin-requiring enzyme SDSE_RS16355 PF02779 Transketolase, pyrimidine binding domain SDSE_RS16360 PF00676 Dehydrogenase E1 component SDSE_RS16365 PF16326 ABC transporter C-terminal domain SDSE_RS16365 PF12848 ABC transporter SDSE_RS16365 PF00005 ABC transporter SDSE_RS16375 PF00756 Putative esterase SDSE_RS16380 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain SDSE_RS16380 PF17770 Ribonuclease J C-terminal domain SDSE_RS16380 PF00753 Metallo-beta-lactamase superfamily SDSE_RS16385 PF12558 ATP-binding cassette cobalt transporter SDSE_RS16385 PF00005 ABC transporter SDSE_RS16415 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) SDSE_RS16440 PF05670 NFACT protein RNA binding domain SDSE_RS16450 PF01594 AI-2E family transporter SDSE_RS16455 PF00293 NUDIX domain SDSE_RS16470 PF16363 GDP-mannose 4,6 dehydratase SDSE_RS16475 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase SDSE_RS16480 PF00483 Nucleotidyl transferase SDSE_RS16485 PF01266 FAD dependent oxidoreductase SDSE_RS16490 PF02535 ZIP Zinc transporter SDSE_RS16495 PF01784 NIF3 (NGG1p interacting factor 3) SDSE_RS16500 PF04816 tRNA (adenine(22)-N(1))-methyltransferase SDSE_RS16505 PF00633 Helix-hairpin-helix motif SDSE_RS16505 PF10576 Iron-sulfur binding domain of endonuclease III SDSE_RS16505 PF00730 HhH-GPD superfamily base excision DNA repair protein SDSE_RS16515 PF00156 Phosphoribosyl transferase domain SDSE_RS16520 PF17768 RecJ OB domain SDSE_RS16520 PF10141 Single-strand DNA-specific exonuclease, C terminal domain SDSE_RS16520 PF02272 DHHA1 domain SDSE_RS16520 PF01368 DHH family SDSE_RS16525 PF00106 short chain dehydrogenase SDSE_RS16530 PF00753 Metallo-beta-lactamase superfamily SDSE_RS16530 PF12706 Beta-lactamase superfamily domain SDSE_RS16540 PF16360 GTP-binding GTPase Middle Region SDSE_RS16540 PF01926 50S ribosome-binding GTPase SDSE_RS16540 PF13167 GTP-binding GTPase N-terminal SDSE_RS16555 PF13417 Glutathione S-transferase, N-terminal domain SDSE_RS16565 PF12368 Rhodanase C-terminal SDSE_RS16565 PF17773 UPF0176 acylphosphatase like domain SDSE_RS16565 PF00581 Rhodanese-like domain SDSE_RS16575 PF03358 NADPH-dependent FMN reductase SDSE_RS16580 PF00343 Carbohydrate phosphorylase SDSE_RS16585 PF02446 4-alpha-glucanotransferase SDSE_RS16590 PF00356 Bacterial regulatory proteins, lacI family SDSE_RS16590 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family SDSE_RS16595 PF13936 Helix-turn-helix domain SDSE_RS16600 PF13416 Bacterial extracellular solute-binding protein SDSE_RS16605 PF00528 Binding-protein-dependent transport system inner membrane component SDSE_RS16610 PF00528 Binding-protein-dependent transport system inner membrane component SDSE_RS16615 PF00356 Bacterial regulatory proteins, lacI family SDSE_RS16635 PF02903 Alpha amylase, N-terminal ig-like domain SDSE_RS16635 PF00128 Alpha amylase, catalytic domain SDSE_RS16640 PF13416 Bacterial extracellular solute-binding protein SDSE_RS16645 PF04914 DltD protein SDSE_RS16650 PF00550 Phosphopantetheine attachment site SDSE_RS16655 PF03062 MBOAT, membrane-bound O-acyltransferase family SDSE_RS16660 PF00501 AMP-binding enzyme SDSE_RS16660 PF13193 AMP-binding enzyme C-terminal domain SDSE_RS16670 PF00271 Helicase conserved C-terminal domain SDSE_RS16670 PF12344 Ultra-violet resistance protein B SDSE_RS16670 PF17757 UvrB interaction domain SDSE_RS16670 PF02151 UvrB/uvrC motif SDSE_RS16670 PF04851 Type III restriction enzyme, res subunit SDSE_RS16675 PF00528 Binding-protein-dependent transport system inner membrane component SDSE_RS16680 PF00005 ABC transporter SDSE_RS16695 PF09269 Domain of unknown function (DUF1967) SDSE_RS16695 PF01018 GTP1/OBG SDSE_RS16695 PF01926 50S ribosome-binding GTPase SDSE_RS16700 PF02073 Thermophilic metalloprotease (M29) SDSE_RS16715 PF00849 RNA pseudouridylate synthase SDSE_RS16715 PF01479 S4 domain SDSE_RS16725 PF07690 Major Facilitator Superfamily SDSE_RS16730 PF08903 Domain of unknown function (DUF1846) SDSE_RS16735 PF03649 Uncharacterised protein family (UPF0014) SDSE_RS16740 PF00005 ABC transporter SDSE_RS16765 PF01610 Transposase SDSE_RS16765 PF13683 Integrase core domain SDSE_RS16770 PF00145 C-5 cytosine-specific DNA methylase SDSE_RS16790 PF00145 C-5 cytosine-specific DNA methylase SDSE_RS16790 PF01381 Helix-turn-helix SDSE_RS16800 PF02796 Helix-turn-helix domain of resolvase SDSE_RS16800 PF00239 Resolvase, N terminal domain SDSE_RS16820 PF01554 MatE SDSE_RS16825 PF00005 ABC transporter SDSE_RS16840 PF00664 ABC transporter transmembrane region SDSE_RS16840 PF00005 ABC transporter SDSE_RS16845 PF00664 ABC transporter transmembrane region SDSE_RS16845 PF08021 Siderophore-interacting FAD-binding domain SDSE_RS16845 PF04954 Siderophore-interacting protein SDSE_RS16845 PF00005 ABC transporter SDSE_RS16850 PF17922 Tetracyclin repressor-like, C-terminal domain SDSE_RS16850 PF00440 Bacterial regulatory proteins, tetR family SDSE_RS16860 PF03432 Relaxase/Mobilisation nuclease domain SDSE_RS16865 PF00271 Helicase conserved C-terminal domain SDSE_RS16865 PF08148 DSHCT (NUC185) domain SDSE_RS16865 PF00270 DEAD/DEAH box helicase SDSE_RS16885 PF01131 DNA topoisomerase SDSE_RS16885 PF01751 Toprim domain SDSE_RS16960 PF05958 tRNA (Uracil-5-)-methyltransferase SDSE_RS16970 PF00239 Resolvase, N terminal domain SDSE_RS16970 PF02796 Helix-turn-helix domain of resolvase SDSE_RS16980 PF05257 CHAP domain SDSE_RS16980 PF01520 N-acetylmuramoyl-L-alanine amidase SDSE_RS16980 PF08460 Bacterial SH3 domain SDSE_RS16985 PF05105 Bacteriophage holin family SDSE_RS17055 PF00574 Clp protease SDSE_RS17060 PF04860 Phage portal protein SDSE_RS17105 PF00145 C-5 cytosine-specific DNA methylase SDSE_RS17110 PF01555 DNA methylase SDSE_RS17125 PF02772 S-adenosylmethionine synthetase, central domain SDSE_RS17125 PF00438 S-adenosylmethionine synthetase, N-terminal domain SDSE_RS17125 PF02773 S-adenosylmethionine synthetase, C-terminal domain SDSE_RS17170 PF01367 5'-3' exonuclease, C-terminal SAM fold SDSE_RS17170 PF00476 DNA polymerase family A SDSE_RS17170 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain SDSE_RS17170 PF01612 3'-5' exonuclease SDSE_RS17195 PF00145 C-5 cytosine-specific DNA methylase SDSE_RS17200 PF00145 C-5 cytosine-specific DNA methylase SDSE_RS17205 PF01381 Helix-turn-helix SDSE_RS17230 PF11798 IMS family HHH motif SDSE_RS17230 PF00817 impB/mucB/samB family SDSE_RS17230 PF11799 impB/mucB/samB family C-terminal domain SDSE_RS17275 PF00308 Bacterial dnaA protein SDSE_RS17275 PF08299 Bacterial dnaA protein helix-turn-helix SDSE_RS17285 PF00772 DnaB-like helicase N terminal domain SDSE_RS17285 PF03796 DnaB-like helicase C terminal domain SDSE_RS17290 PF05958 tRNA (Uracil-5-)-methyltransferase SDSE_RS17290 PF01938 TRAM domain SDSE_RS17295 PF03816 Cell envelope-related transcriptional attenuator domain SDSE_RS17300 PF01202 Shikimate kinase SDSE_RS17305 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) SDSE_RS17315 PF00557 Metallopeptidase family M24 SDSE_RS17320 PF00571 CBS domain SDSE_RS17320 PF03061 Thioesterase superfamily SDSE_RS17320 PF00392 Bacterial regulatory proteins, gntR family SDSE_RS17320 PF07085 DRTGG domain SDSE_RS17330 PF17573 GA-like domain SDSE_RS17330 PF00746 LPXTG cell wall anchor motif SDSE_RS17330 PF01378 B domain SDSE_RS17335 PF00933 Glycosyl hydrolase family 3 N terminal domain SDSE_RS17345 PF00106 short chain dehydrogenase SDSE_RS17350 PF03786 D-mannonate dehydratase (UxuA) SDSE_RS17355 PF02614 Glucuronate isomerase SDSE_RS17365 PF01081 KDPG and KHG aldolase SDSE_RS17370 PF00392 Bacterial regulatory proteins, gntR family SDSE_RS17370 PF07729 FCD domain SDSE_RS17375 PF02837 Glycosyl hydrolases family 2, sugar binding domain SDSE_RS17375 PF02836 Glycosyl hydrolases family 2, TIM barrel domain SDSE_RS17375 PF00703 Glycosyl hydrolases family 2 SDSE_RS17390 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) SDSE_RS17395 PF02772 S-adenosylmethionine synthetase, central domain SDSE_RS17395 PF00438 S-adenosylmethionine synthetase, N-terminal domain SDSE_RS17395 PF02773 S-adenosylmethionine synthetase, C-terminal domain SDSE_RS17405 PF03099 Biotin/lipoate A/B protein ligase family SDSE_RS17405 PF08279 HTH domain SDSE_RS17405 PF02237 Biotin protein ligase C terminal domain SDSE_RS17410 PF12169 DNA polymerase III subunits gamma and tau domain III SDSE_RS17415 PF13185 GAF domain SDSE_RS17430 PF00485 Phosphoribulokinase / Uridine kinase family SDSE_RS17435 PF00270 DEAD/DEAH box helicase SDSE_RS17435 PF00271 Helicase conserved C-terminal domain SDSE_RS17440 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain SDSE_RS17440 PF01522 Polysaccharide deacetylase SDSE_RS17445 PF00171 Aldehyde dehydrogenase family SDSE_RS17450 PF05524 PEP-utilising enzyme, N-terminal SDSE_RS17450 PF02896 PEP-utilising enzyme, TIM barrel domain SDSE_RS17450 PF00391 PEP-utilising enzyme, mobile domain SDSE_RS17455 PF00381 PTS HPr component phosphorylation site SDSE_RS17460 PF00462 Glutaredoxin SDSE_RS17465 PF08343 Ribonucleotide reductase N-terminal SDSE_RS17465 PF02867 Ribonucleotide reductase, barrel domain SDSE_RS17465 PF00317 Ribonucleotide reductase, all-alpha domain SDSE_RS17470 PF00268 Ribonucleotide reductase, small chain SDSE_RS17490 PF01381 Helix-turn-helix SDSE_RS17500 PF02272 DHHA1 domain SDSE_RS17500 PF01411 tRNA synthetases class II (A) SDSE_RS17500 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain SDSE_RS17505 PF13145 PPIC-type PPIASE domain SDSE_RS17510 PF01596 O-methyltransferase SDSE_RS17515 PF07690 Major Facilitator Superfamily SDSE_RS17530 PF03358 NADPH-dependent FMN reductase SDSE_RS17535 PF08439 Oligopeptidase F SDSE_RS17535 PF01432 Peptidase family M3 SDSE_RS17550 PF01479 S4 domain SDSE_RS17550 PF00849 RNA pseudouridylate synthase SDSE_RS17555 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase SDSE_RS17560 PF02547 Queuosine biosynthesis protein SDSE_RS17575 PF02777 Iron/manganese superoxide dismutases, C-terminal domain SDSE_RS17575 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain SDSE_RS17585 PF03772 Competence protein SDSE_RS17585 PF13567 Domain of unknown function (DUF4131) SDSE_RS17585 PF00753 Metallo-beta-lactamase superfamily SDSE_RS17595 PF00239 Resolvase, N terminal domain SDSE_RS17595 PF02796 Helix-turn-helix domain of resolvase SDSE_RS17610 PF05257 CHAP domain SDSE_RS17610 PF01520 N-acetylmuramoyl-L-alanine amidase SDSE_RS17610 PF08460 Bacterial SH3 domain SDSE_RS17615 PF05105 Bacteriophage holin family SDSE_RS17680 PF00574 Clp protease SDSE_RS17715 PF00145 C-5 cytosine-specific DNA methylase SDSE_RS17725 PF01555 DNA methylase SDSE_RS17785 PF00476 DNA polymerase family A SDSE_RS17785 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain SDSE_RS17785 PF01612 3'-5' exonuclease SDSE_RS17785 PF01367 5'-3' exonuclease, C-terminal SAM fold SDSE_RS17805 PF07728 AAA domain (dynein-related subfamily) SDSE_RS17815 PF02086 D12 class N6 adenine-specific DNA methyltransferase SDSE_RS17830 PF11798 IMS family HHH motif SDSE_RS17830 PF11799 impB/mucB/samB family C-terminal domain SDSE_RS17830 PF00817 impB/mucB/samB family SDSE_RS17850 PF00005 ABC transporter SDSE_RS17850 PF12848 ABC transporter SDSE_RS17855 PF07690 Major Facilitator Superfamily SDSE_RS17880 PF10531 SLBB domain SDSE_RS17885 PF01553 Acyltransferase SDSE_RS17890 PF05175 Methyltransferase small domain SDSE_RS17895 PF01541 GIY-YIG catalytic domain SDSE_RS17900 PF02705 K+ potassium transporter SDSE_RS17905 PF00271 Helicase conserved C-terminal domain SDSE_RS17905 PF00270 DEAD/DEAH box helicase SDSE_RS17910 PF03180 NLPA lipoprotein SDSE_RS17915 PF00528 Binding-protein-dependent transport system inner membrane component SDSE_RS17920 PF00005 ABC transporter SDSE_RS17920 PF09383 NIL domain SDSE_RS17925 PF08000 Bacterial PH domain SDSE_RS17930 PF03144 Elongation factor Tu domain 2 SDSE_RS17930 PF00009 Elongation factor Tu GTP binding domain SDSE_RS17930 PF16658 Class II release factor RF3, C-terminal domain SDSE_RS17940 PF08245 Mur ligase middle domain SDSE_RS17940 PF01225 Mur ligase family, catalytic domain SDSE_RS17940 PF02875 Mur ligase family, glutamate ligase domain SDSE_RS17945 PF07478 D-ala D-ala ligase C-terminus SDSE_RS17945 PF01820 D-ala D-ala ligase N-terminus SDSE_RS17950 PF13662 Toprim domain SDSE_RS17950 PF02132 RecR protein SDSE_RS17955 PF00905 Penicillin binding protein transpeptidase domain SDSE_RS17955 PF03717 Penicillin-binding Protein dimerisation domain SDSE_RS17960 PF01226 Formate/nitrite transporter SDSE_RS17970 PF08279 HTH domain SDSE_RS17970 PF02829 3H domain SDSE_RS17975 PF00300 Histidine phosphatase superfamily (branch 1) SDSE_RS17980 PF01180 Dihydroorotate dehydrogenase SDSE_RS18000 PF00216 Bacterial DNA-binding protein SDSE_RS18010 PF13472 GDSL-like Lipase/Acylhydrolase family SDSE_RS18015 PF02645 Uncharacterised protein, DegV family COG1307 SDSE_RS18025 PF13476 AAA domain SDSE_RS18030 PF01316 Arginine repressor, DNA binding domain SDSE_RS18030 PF02863 Arginine repressor, C-terminal domain SDSE_RS18035 PF01479 S4 domain SDSE_RS18035 PF01728 FtsJ-like methyltransferase SDSE_RS18040 PF00348 Polyprenyl synthetase SDSE_RS18045 PF02609 Exonuclease VII small subunit SDSE_RS18050 PF02601 Exonuclease VII, large subunit SDSE_RS18050 PF13742 OB-fold nucleic acid binding domain SDSE_RS18060 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain SDSE_RS18060 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain SDSE_RS18065 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I SDSE_RS18065 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III SDSE_RS18065 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II SDSE_RS18065 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain SDSE_RS18070 PF00875 DNA photolyase SDSE_RS18070 PF03441 FAD binding domain of DNA photolyase SDSE_RS18080 PF17910 FeoB cytosolic helical domain SDSE_RS18080 PF07670 Nucleoside recognition SDSE_RS18080 PF02421 Ferrous iron transport protein B SDSE_RS18080 PF07664 Ferrous iron transport protein B C terminus SDSE_RS18090 PF00005 ABC transporter SDSE_RS18095 PF00528 Binding-protein-dependent transport system inner membrane component SDSE_RS18100 PF08796 Protein of unknown function (DUF1797) SDSE_RS18105 PF10431 C-terminal, D2-small domain, of ClpB protein SDSE_RS18105 PF00004 ATPase family associated with various cellular activities (AAA) SDSE_RS18105 PF17871 AAA lid domain SDSE_RS18105 PF07724 AAA domain (Cdc48 subfamily) SDSE_RS18110 PF00293 NUDIX domain SDSE_RS18120 PF00133 tRNA synthetases class I (I, L, M and V) SDSE_RS18120 PF08264 Anticodon-binding domain of tRNA SDSE_RS18125 PF05103 DivIVA protein SDSE_RS18140 PF04472 Cell division protein SepF SDSE_RS18145 PF01168 Alanine racemase, N-terminal domain SDSE_RS18150 PF12327 FtsZ family, C-terminal domain SDSE_RS18150 PF00091 Tubulin/FtsZ family, GTPase domain SDSE_RS18155 PF11983 Membrane-attachment and polymerisation-promoting switch SDSE_RS18155 PF02491 SHS2 domain inserted in FTSA SDSE_RS18165 PF03033 Glycosyltransferase family 28 N-terminal domain SDSE_RS18165 PF04101 Glycosyltransferase family 28 C-terminal domain SDSE_RS18170 PF02875 Mur ligase family, glutamate ligase domain SDSE_RS18170 PF08245 Mur ligase middle domain SDSE_RS18185 PF00679 Elongation factor G C-terminus SDSE_RS18185 PF00009 Elongation factor Tu GTP binding domain SDSE_RS18185 PF03144 Elongation factor Tu domain 2 SDSE_RS18185 PF14492 Elongation Factor G, domain II SDSE_RS18190 PF00581 Rhodanese-like domain SDSE_RS18195 PF00480 ROK family SDSE_RS18205 PF00210 Ferritin-like domain SDSE_RS18215 PF00005 ABC transporter SDSE_RS18215 PF00664 ABC transporter transmembrane region SDSE_RS18220 PF00664 ABC transporter transmembrane region SDSE_RS18220 PF00005 ABC transporter SDSE_RS18230 PF04055 Radical SAM superfamily SDSE_RS18235 PF06265 Protein of unknown function (DUF1027) SDSE_RS18250 PF13407 Periplasmic binding protein domain SDSE_RS18255 PF02653 Branched-chain amino acid transport system / permease component SDSE_RS18260 PF00005 ABC transporter SDSE_RS18265 PF05025 RbsD / FucU transport protein family SDSE_RS18270 PF00294 pfkB family carbohydrate kinase SDSE_RS18275 PF00356 Bacterial regulatory proteins, lacI family SDSE_RS18280 PF05362 Lon protease (S16) C-terminal proteolytic domain SDSE_RS18280 PF13180 PDZ domain SDSE_RS18285 PF01467 Cytidylyltransferase-like SDSE_RS18295 PF03590 Aspartate-ammonia ligase SDSE_RS18300 PF00696 Amino acid kinase family SDSE_RS18310 PF01546 Peptidase family M20/M25/M40 SDSE_RS18315 PF03606 C4-dicarboxylate anaerobic carrier SDSE_RS18320 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain SDSE_RS18320 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain SDSE_RS18325 PF13673 Acetyltransferase (GNAT) domain SDSE_RS18335 PF00027 Cyclic nucleotide-binding domain SDSE_RS18335 PF13545 Crp-like helix-turn-helix domain SDSE_RS18340 PF02863 Arginine repressor, C-terminal domain SDSE_RS18340 PF01316 Arginine repressor, DNA binding domain SDSE_RS18355 PF02743 Cache domain SDSE_RS18355 PF06580 Histidine kinase SDSE_RS18355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SDSE_RS18355 PF00672 HAMP domain SDSE_RS18360 PF00072 Response regulator receiver domain SDSE_RS18360 PF12833 Helix-turn-helix domain SDSE_RS18365 PF01625 Peptide methionine sulfoxide reductase SDSE_RS18365 PF01641 SelR domain SDSE_RS18370 PF08534 Redoxin SDSE_RS18375 PF02683 Cytochrome C biogenesis protein transmembrane region SDSE_RS18385 PF02894 Oxidoreductase family, C-terminal alpha/beta domain SDSE_RS18385 PF01408 Oxidoreductase family, NAD-binding Rossmann fold SDSE_RS18390 PF09827 CRISPR associated protein Cas2 SDSE_RS18395 PF01867 CRISPR associated protein Cas1 SDSE_RS18430 PF01609 Transposase DDE domain SDSE_RS18430 PF13808 DDE_Tnp_1-associated SDSE_RS18435 PF10458 Valyl tRNA synthetase tRNA binding arm SDSE_RS18435 PF00133 tRNA synthetases class I (I, L, M and V) SDSE_RS18435 PF08264 Anticodon-binding domain of tRNA SDSE_RS18465 PF13936 Helix-turn-helix domain SDSE_RS18565 PF01381 Helix-turn-helix SDSE_RS18595 PF16364 Cell surface antigen C-terminus SDSE_RS18595 PF17998 Cell surface antigen I/II C2 terminal domain SDSE_RS18595 PF18652 Adhesin P1 N-terminal domain SDSE_RS18595 PF08363 Glucan-binding protein C SDSE_RS18595 PF06696 Streptococcal surface antigen repeat SDSE_RS18655 PF12833 Helix-turn-helix domain SDSE_RS18660 PF00793 DAHP synthetase I family SDSE_RS18660 PF01817 Chorismate mutase type II SDSE_RS18665 PF01761 3-dehydroquinate synthase SDSE_RS18685 PF08501 Shikimate dehydrogenase substrate binding domain SDSE_RS18685 PF18317 Shikimate 5'-dehydrogenase C-terminal domain SDSE_RS18690 PF02837 Glycosyl hydrolases family 2, sugar binding domain SDSE_RS18690 PF16355 Domain of unknown function (DUF4982) SDSE_RS18690 PF00703 Glycosyl hydrolases family 2 SDSE_RS18690 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 SDSE_RS18690 PF02836 Glycosyl hydrolases family 2, TIM barrel domain SDSE_RS18695 PF12833 Helix-turn-helix domain SDSE_RS18695 PF00072 Response regulator receiver domain SDSE_RS18700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SDSE_RS18700 PF02743 Cache domain SDSE_RS18700 PF00672 HAMP domain SDSE_RS18700 PF06580 Histidine kinase SDSE_RS18710 PF12010 Domain of unknown function (DUF3502) SDSE_RS18715 PF00528 Binding-protein-dependent transport system inner membrane component SDSE_RS18720 PF00528 Binding-protein-dependent transport system inner membrane component SDSE_RS18725 PF00480 ROK family SDSE_RS18740 PF00232 Glycosyl hydrolase family 1 SDSE_RS18745 PF02838 Glycosyl hydrolase family 20, domain 2 SDSE_RS18745 PF07555 beta-N-acetylglucosaminidase SDSE_RS18750 PF00392 Bacterial regulatory proteins, gntR family SDSE_RS18760 PF17677 Glycosyl hydrolases family 38 C-terminal beta sandwich domain SDSE_RS18760 PF09261 Alpha mannosidase middle domain SDSE_RS18760 PF07748 Glycosyl hydrolases family 38 C-terminal domain SDSE_RS18760 PF01074 Glycosyl hydrolases family 38 N-terminal domain SDSE_RS18760 PF18438 Glycosyl hydrolases family 38 C-terminal domain 1 SDSE_RS18775 PF00583 Acetyltransferase (GNAT) family SDSE_RS18780 PF00296 Luciferase-like monooxygenase SDSE_RS18785 PF13193 AMP-binding enzyme C-terminal domain SDSE_RS18785 PF00501 AMP-binding enzyme SDSE_RS18790 PF03060 Nitronate monooxygenase SDSE_RS18800 PF16113 Enoyl-CoA hydratase/isomerase SDSE_RS18800 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain SDSE_RS18800 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain SDSE_RS18810 PF00005 ABC transporter SDSE_RS18815 PF05958 tRNA (Uracil-5-)-methyltransferase SDSE_RS18815 PF01938 TRAM domain SDSE_RS18820 PF02631 RecX family SDSE_RS18825 PF04167 Protein of unknown function (DUF402) SDSE_RS18895 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus SDSE_RS18895 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein SDSE_RS18905 PF04851 Type III restriction enzyme, res subunit SDSE_RS18905 PF00271 Helicase conserved C-terminal domain SDSE_RS18910 PF01205 Uncharacterized protein family UPF0029 SDSE_RS18910 PF09186 Domain of unknown function (DUF1949) SDSE_RS18915 PF00291 Pyridoxal-phosphate dependent enzyme SDSE_RS18920 PF00575 S1 RNA binding domain SDSE_RS18925 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD SDSE_RS18930 PF00072 Response regulator receiver domain SDSE_RS18930 PF00196 Bacterial regulatory proteins, luxR family SDSE_RS18935 PF00672 HAMP domain SDSE_RS18935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SDSE_RS18935 PF07730 Histidine kinase SDSE_RS18945 PF00069 Protein kinase domain SDSE_RS18945 PF03793 PASTA domain SDSE_RS18955 PF01029 NusB family SDSE_RS18955 PF01189 16S rRNA methyltransferase RsmB/F SDSE_RS18960 PF02911 Formyl transferase, C-terminal domain SDSE_RS18960 PF00551 Formyl transferase SDSE_RS18965 PF18074 Primosomal protein N C-terminal domain SDSE_RS18965 PF18319 PriA DNA helicase Cys-rich region (CRR) domain SDSE_RS18965 PF17764 3′ DNA-binding domain (3′BD) SDSE_RS18965 PF04851 Type III restriction enzyme, res subunit SDSE_RS18965 PF00271 Helicase conserved C-terminal domain SDSE_RS18970 PF01192 RNA polymerase Rpb6 SDSE_RS18975 PF00625 Guanylate kinase SDSE_RS18980 PF01966 HD domain SDSE_RS18980 PF00013 KH domain SDSE_RS18980 PF12072 Domain of unknown function (DUF3552) SDSE_RS18985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SDSE_RS18985 PF03466 LysR substrate binding domain SDSE_RS18990 PF00108 Thiolase, N-terminal domain SDSE_RS18990 PF02803 Thiolase, C-terminal domain SDSE_RS18995 PF01144 Coenzyme A transferase SDSE_RS19000 PF01144 Coenzyme A transferase SDSE_RS19015 PF02664 S-Ribosylhomocysteinase (LuxS) SDSE_RS19020 PF18041 MapZ extracellular domain 1 SDSE_RS19020 PF18708 MapZ extracellular C-terminal domain 2 SDSE_RS19025 PF01170 Putative RNA methylase family UPF0020 SDSE_RS19025 PF02926 THUMP domain SDSE_RS19030 PF05103 DivIVA protein SDSE_RS19035 PF06908 YspA SLOG family SDSE_RS19040 PF03838 Recombination protein U SDSE_RS19045 PF00912 Transglycosylase SDSE_RS19045 PF00905 Penicillin binding protein transpeptidase domain SDSE_RS19050 PF03051 Peptidase C1-like family SDSE_RS19055 PF02540 NAD synthase SDSE_RS19060 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain SDSE_RS19060 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain SDSE_RS19060 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family SDSE_RS19065 PF00324 Amino acid permease SDSE_RS19070 PF07992 Pyridine nucleotide-disulphide oxidoreductase SDSE_RS19080 PF00005 ABC transporter SDSE_RS19085 PF00528 Binding-protein-dependent transport system inner membrane component SDSE_RS19095 PF00270 DEAD/DEAH box helicase SDSE_RS19095 PF00271 Helicase conserved C-terminal domain SDSE_RS19100 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 SDSE_RS19100 PF00953 Glycosyl transferase family 4 SDSE_RS19105 PF03793 PASTA domain SDSE_RS19105 PF03717 Penicillin-binding Protein dimerisation domain SDSE_RS19105 PF00905 Penicillin binding protein transpeptidase domain SDSE_RS19115 PF01795 MraW methylase family SDSE_RS19120 PF00171 Aldehyde dehydrogenase family SDSE_RS19125 PF00696 Amino acid kinase family SDSE_RS19135 PF00005 ABC transporter SDSE_RS19145 PF02780 Transketolase, C-terminal domain SDSE_RS19145 PF02779 Transketolase, pyrimidine binding domain SDSE_RS19145 PF00456 Transketolase, thiamine diphosphate binding domain SDSE_RS19150 PF00923 Transaldolase/Fructose-6-phosphate aldolase SDSE_RS19160 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SDSE_RS19160 PF07992 Pyridine nucleotide-disulphide oxidoreductase SDSE_RS19165 PF00230 Major intrinsic protein SDSE_RS19170 PF16901 C-terminal domain of alpha-glycerophosphate oxidase SDSE_RS19170 PF01266 FAD dependent oxidoreductase SDSE_RS19175 PF00370 FGGY family of carbohydrate kinases, N-terminal domain SDSE_RS19175 PF02782 FGGY family of carbohydrate kinases, C-terminal domain SDSE_RS19180 PF03413 Peptidase propeptide and YPEB domain SDSE_RS19185 PF05979 Bacterial protein of unknown function (DUF896) SDSE_RS19190 PF02092 Glycyl-tRNA synthetase beta subunit SDSE_RS19195 PF02091 Glycyl-tRNA synthetase alpha subunit SDSE_RS19200 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family SDSE_RS19205 PF00248 Aldo/keto reductase family SDSE_RS19210 PF01979 Amidohydrolase family SDSE_RS19215 PF02690 Na+/Pi-cotransporter SDSE_RS19225 PF02645 Uncharacterised protein, DegV family COG1307 SDSE_RS19240 PF03458 UPF0126 domain SDSE_RS19245 PF01791 DeoC/LacD family aldolase SDSE_RS19250 PF00294 pfkB family carbohydrate kinase SDSE_RS19255 PF02502 Ribose/Galactose Isomerase SDSE_RS19260 PF02502 Ribose/Galactose Isomerase SDSE_RS19275 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SDSE_RS19280 PF00455 DeoR C terminal sensor domain SDSE_RS19280 PF08220 DeoR-like helix-turn-helix domain SDSE_RS19290 PF00403 Heavy-metal-associated domain SDSE_RS19295 PF03965 Penicillinase repressor SDSE_RS19300 PF07859 alpha/beta hydrolase fold SDSE_RS19305 PF02033 Ribosome-binding factor A SDSE_RS19310 PF00009 Elongation factor Tu GTP binding domain SDSE_RS19310 PF11987 Translation-initiation factor 2 SDSE_RS19310 PF04760 Translation initiation factor IF-2, N-terminal region SDSE_RS19315 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family SDSE_RS19320 PF04296 Protein of unknown function (DUF448) SDSE_RS19325 PF13184 NusA-like KH domain SDSE_RS19325 PF00575 S1 RNA binding domain SDSE_RS19325 PF08529 NusA N-terminal domain SDSE_RS19330 PF02576 RimP N-terminal domain SDSE_RS19330 PF17384 RimP C-terminal SH3 domain SDSE_RS19340 PF02390 Putative methyltransferase SDSE_RS19350 PF05975 Bacterial ABC transporter protein EcsB SDSE_RS19355 PF00005 ABC transporter SDSE_RS19360 PF01230 HIT domain SDSE_RS19370 PF03816 Cell envelope-related transcriptional attenuator domain SDSE_RS19375 PF13302 Acetyltransferase (GNAT) domain SDSE_RS19380 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE SDSE_RS19385 PF00860 Permease family SDSE_RS19395 PF03830 PTS system sorbose subfamily IIB component SDSE_RS19395 PF03610 PTS system fructose IIA component SDSE_RS19400 PF03609 PTS system sorbose-specific iic component SDSE_RS19405 PF03613 PTS system mannose/fructose/sorbose family IID component SDSE_RS19420 PF02403 Seryl-tRNA synthetase N-terminal domain SDSE_RS19420 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SDSE_RS19425 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit SDSE_RS19430 PF01039 Carboxyl transferase domain SDSE_RS19430 PF17848 Acetyl-coA carboxylase zinc finger domain SDSE_RS19435 PF00289 Biotin carboxylase, N-terminal domain SDSE_RS19435 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain SDSE_RS19435 PF02785 Biotin carboxylase C-terminal domain SDSE_RS19440 PF07977 FabA-like domain SDSE_RS19445 PF00364 Biotin-requiring enzyme SDSE_RS19450 PF02801 Beta-ketoacyl synthase, C-terminal domain SDSE_RS19450 PF00109 Beta-ketoacyl synthase, N-terminal domain SDSE_RS19460 PF00698 Acyl transferase domain SDSE_RS19465 PF03060 Nitronate monooxygenase SDSE_RS19470 PF00550 Phosphopantetheine attachment site SDSE_RS19475 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III SDSE_RS19475 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal SDSE_RS19485 PF00378 Enoyl-CoA hydratase/isomerase SDSE_RS19490 PF00684 DnaJ central domain SDSE_RS19490 PF01556 DnaJ C terminal domain SDSE_RS19490 PF00226 DnaJ domain SDSE_RS19500 PF00012 Hsp70 protein SDSE_RS19505 PF01025 GrpE SDSE_RS19510 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding SDSE_RS19510 PF01628 HrcA protein C terminal domain SDSE_RS19515 PF13936 Helix-turn-helix domain SDSE_RS19525 PF02557 D-alanyl-D-alanine carboxypeptidase SDSE_RS19530 PF00300 Histidine phosphatase superfamily (branch 1) SDSE_RS19535 PF04226 Transglycosylase associated protein SDSE_RS19540 PF00892 EamA-like transporter family SDSE_RS19545 PF02934 GatB/GatE catalytic domain SDSE_RS19545 PF02637 GatB domain SDSE_RS19550 PF01425 Amidase SDSE_RS19555 PF02686 Glu-tRNAGln amidotransferase C subunit SDSE_RS19560 PF00391 PEP-utilising enzyme, mobile domain SDSE_RS19560 PF02896 PEP-utilising enzyme, TIM barrel domain SDSE_RS19560 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain SDSE_RS19565 PF03618 Kinase/pyrophosphorylase SDSE_RS19570 PF08279 HTH domain SDSE_RS19570 PF00571 CBS domain SDSE_RS19580 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SDSE_RS19580 PF07992 Pyridine nucleotide-disulphide oxidoreductase SDSE_RS19590 PF02583 Metal-sensitive transcriptional repressor SDSE_RS19595 PF00857 Isochorismatase family SDSE_RS19600 PF06018 CodY GAF-like domain SDSE_RS19600 PF08222 CodY helix-turn-helix domain SDSE_RS19605 PF00155 Aminotransferase class I and II SDSE_RS19620 PF00710 Asparaginase, N-terminal SDSE_RS19620 PF17763 Glutaminase/Asparaginase C-terminal domain SDSE_RS19625 PF00248 Aldo/keto reductase family SDSE_RS19630 PF00271 Helicase conserved C-terminal domain SDSE_RS19630 PF00270 DEAD/DEAH box helicase SDSE_RS19630 PF17191 RecG wedge domain SDSE_RS19635 PF00005 ABC transporter SDSE_RS19650 PF00664 ABC transporter transmembrane region SDSE_RS19650 PF00005 ABC transporter SDSE_RS19655 PF00005 ABC transporter SDSE_RS19655 PF00664 ABC transporter transmembrane region SDSE_RS19660 PF00005 ABC transporter SDSE_RS19665 PF01032 FecCD transport family SDSE_RS19670 PF01497 Periplasmic binding protein SDSE_RS19685 PF05257 CHAP domain SDSE_RS19685 PF01476 LysM domain SDSE_RS19690 PF00842 Alanine racemase, C-terminal domain SDSE_RS19690 PF01168 Alanine racemase, N-terminal domain SDSE_RS19695 PF01648 4'-phosphopantetheinyl transferase superfamily SDSE_RS19700 PF07517 SecA DEAD-like domain SDSE_RS19700 PF01043 SecA preprotein cross-linking domain SDSE_RS19700 PF02810 SEC-C motif SDSE_RS19700 PF07516 SecA Wing and Scaffold domain SDSE_RS19705 PF01238 Phosphomannose isomerase type I SDSE_RS19710 PF00480 ROK family SDSE_RS19715 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 SDSE_RS19715 PF00367 phosphotransferase system, EIIB SDSE_RS19715 PF02378 Phosphotransferase system, EIIC SDSE_RS19720 PF00251 Glycosyl hydrolases family 32 N-terminal domain SDSE_RS19720 PF08244 Glycosyl hydrolases family 32 C terminal SDSE_RS19725 PF00356 Bacterial regulatory proteins, lacI family SDSE_RS19730 PF01029 NusB family SDSE_RS19735 PF03780 Asp23 family, cell envelope-related function SDSE_RS19740 PF09285 Elongation factor P, C-terminal SDSE_RS19740 PF01132 Elongation factor P (EF-P) OB domain SDSE_RS19740 PF08207 Elongation factor P (EF-P) KOW-like domain SDSE_RS19745 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region SDSE_RS19750 PF01321 Creatinase/Prolidase N-terminal domain SDSE_RS19750 PF00557 Metallopeptidase family M24 SDSE_RS19755 PF17755 UvrA DNA-binding domain SDSE_RS19755 PF00005 ABC transporter SDSE_RS19755 PF17760 UvrA interaction domain SDSE_RS19770 PF01084 Ribosomal protein S18 SDSE_RS19775 PF00436 Single-strand binding protein family SDSE_RS19780 PF01250 Ribosomal protein S6 SDSE_RS19790 PF14815 NUDIX domain SDSE_RS19790 PF00730 HhH-GPD superfamily base excision DNA repair protein SDSE_RS19805 PF00085 Thioredoxin SDSE_RS19810 PF07992 Pyridine nucleotide-disulphide oxidoreductase SDSE_RS19810 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SDSE_RS19815 PF00488 MutS domain V SDSE_RS19815 PF01713 Smr domain SDSE_RS19835 PF10502 Signal peptidase, peptidase S26 SDSE_RS19840 PF14490 Helix-hairpin-helix containing domain SDSE_RS19840 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain SDSE_RS19840 PF13538 UvrD-like helicase C-terminal domain SDSE_RS19850 PF00817 impB/mucB/samB family SDSE_RS19850 PF11798 IMS family HHH motif SDSE_RS19850 PF11799 impB/mucB/samB family C-terminal domain SDSE_RS19855 PF02901 Pyruvate formate lyase-like SDSE_RS19855 PF01228 Glycine radical SDSE_RS19860 PF13673 Acetyltransferase (GNAT) domain SDSE_RS19865 PF02903 Alpha amylase, N-terminal ig-like domain SDSE_RS19865 PF00128 Alpha amylase, catalytic domain SDSE_RS19865 PF16657 Maltogenic Amylase, C-terminal domain SDSE_RS19870 PF01547 Bacterial extracellular solute-binding protein SDSE_RS19880 PF00528 Binding-protein-dependent transport system inner membrane component SDSE_RS19885 PF00528 Binding-protein-dependent transport system inner membrane component SDSE_RS19890 PF00356 Bacterial regulatory proteins, lacI family SDSE_RS19890 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family SDSE_RS19895 PF00144 Beta-lactamase SDSE_RS19910 PF00230 Major intrinsic protein SDSE_RS19915 PF02129 X-Pro dipeptidyl-peptidase (S15 family) SDSE_RS19915 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain SDSE_RS19915 PF09168 X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal SDSE_RS19935 PF02575 YbaB/EbfC DNA-binding family SDSE_RS19940 PF13411 MerR HTH family regulatory protein SDSE_RS19940 PF07739 TipAS antibiotic-recognition domain SDSE_RS19945 PF01336 OB-fold nucleic acid binding domain SDSE_RS19945 PF11490 DNA polymerase III polC-type N-terminus II SDSE_RS19945 PF00929 Exonuclease SDSE_RS19945 PF07733 Bacterial DNA polymerase III alpha NTPase domain SDSE_RS19945 PF17657 Bacterial DNA polymerase III alpha subunit finger domain SDSE_RS19945 PF02811 PHP domain SDSE_RS19945 PF14579 Helix-hairpin-helix motif SDSE_RS19950 PF04394 Protein of unknown function, DUF536 SDSE_RS19950 PF08279 HTH domain SDSE_RS19975 PF00253 Ribosomal protein S14p/S29e SDSE_RS19980 PF00814 Glycoprotease family SDSE_RS19990 PF00814 Glycoprotease family SDSE_RS19995 PF07288 Protein of unknown function (DUF1447) SDSE_RS20000 PF00753 Metallo-beta-lactamase superfamily SDSE_RS20000 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain SDSE_RS20000 PF17770 Ribonuclease J C-terminal domain SDSE_RS20005 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SDSE_RS20005 PF00005 ABC transporter SDSE_RS20010 PF00005 ABC transporter SDSE_RS20010 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SDSE_RS20015 PF12911 N-terminal TM domain of oligopeptide transport permease C SDSE_RS20015 PF00528 Binding-protein-dependent transport system inner membrane component SDSE_RS20020 PF00528 Binding-protein-dependent transport system inner membrane component SDSE_RS20025 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SDSE_RS20030 PF00120 Glutamine synthetase, catalytic domain SDSE_RS20030 PF03951 Glutamine synthetase, beta-Grasp domain SDSE_RS20035 PF13411 MerR HTH family regulatory protein SDSE_RS20050 PF00162 Phosphoglycerate kinase SDSE_RS20055 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) SDSE_RS20060 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain SDSE_RS20060 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain SDSE_RS20065 PF03144 Elongation factor Tu domain 2 SDSE_RS20065 PF00009 Elongation factor Tu GTP binding domain SDSE_RS20065 PF14492 Elongation Factor G, domain II SDSE_RS20065 PF03764 Elongation factor G, domain IV SDSE_RS20065 PF00679 Elongation factor G C-terminus SDSE_RS20070 PF00177 Ribosomal protein S7p/S5e SDSE_RS20075 PF00164 Ribosomal protein S12/S23 SDSE_RS20085 PF09182 Bacterial purine repressor, N-terminal SDSE_RS20085 PF00156 Phosphoribosyl transferase domain SDSE_RS20090 PF01966 HD domain SDSE_RS20095 PF02646 RmuC family SDSE_RS20100 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain SDSE_RS20100 PF04263 Thiamin pyrophosphokinase, catalytic domain SDSE_RS20105 PF00834 Ribulose-phosphate 3 epimerase family SDSE_RS20110 PF03193 RsgA GTPase SDSE_RS20110 PF16745 RsgA N-terminal domain SDSE_RS20115 PF00398 Ribosomal RNA adenine dimethylase SDSE_RS20120 PF13331 Domain of unknown function (DUF4093) SDSE_RS20125 PF01026 TatD related DNase SDSE_RS20135 PF00857 Isochorismatase family SDSE_RS20145 PF00480 ROK family SDSE_RS20150 PF00701 Dihydrodipicolinate synthetase family SDSE_RS20165 PF00528 Binding-protein-dependent transport system inner membrane component SDSE_RS20170 PF00528 Binding-protein-dependent transport system inner membrane component SDSE_RS20180 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase SDSE_RS20185 PF00468 Ribosomal protein L34 SDSE_RS20190 PF01424 R3H domain SDSE_RS20190 PF14804 Jag N-terminus SDSE_RS20195 PF02096 60Kd inner membrane protein SDSE_RS20200 PF00825 Ribonuclease P SDSE_RS20220 PF00749 tRNA synthetases class I (E and Q), catalytic domain SDSE_RS20240 PF01987 Mitochondrial biogenesis AIM24 SDSE_RS20245 PF00484 Carbonic anhydrase SDSE_RS20250 PF18073 Rubredoxin metal binding domain SDSE_RS20255 PF00692 dUTPase SDSE_RS20260 PF02677 Epoxyqueuosine reductase QueH SDSE_RS20265 PF00005 ABC transporter SDSE_RS20265 PF00664 ABC transporter transmembrane region SDSE_RS20270 PF00005 ABC transporter SDSE_RS20270 PF00664 ABC transporter transmembrane region SDSE_RS20280 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus SDSE_RS20280 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus SDSE_RS20285 PF00483 Nucleotidyl transferase SDSE_RS20295 PF01694 Rhomboid family SDSE_RS20300 PF01812 5-formyltetrahydrofolate cyclo-ligase family SDSE_RS20310 PF13936 Helix-turn-helix domain SDSE_RS20330 PF13936 Helix-turn-helix domain SDSE_RS20335 PF00342 Phosphoglucose isomerase SDSE_RS20340 PF08534 Redoxin SDSE_RS20350 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain SDSE_RS20350 PF01123 Staphylococcal/Streptococcal toxin, OB-fold domain SDSE_RS20360 PF14437 MafB19-like deaminase SDSE_RS20365 PF12706 Beta-lactamase superfamily domain SDSE_RS20370 PF02632 BioY family SDSE_RS20375 PF01702 Queuine tRNA-ribosyltransferase SDSE_RS20385 PF01475 Ferric uptake regulator family SDSE_RS20390 PF13380 CoA binding domain SDSE_RS20395 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain SDSE_RS20395 PF00476 DNA polymerase family A SDSE_RS20395 PF01367 5'-3' exonuclease, C-terminal SAM fold SDSE_RS20400 PF00528 Binding-protein-dependent transport system inner membrane component SDSE_RS20405 PF00005 ABC transporter SDSE_RS20405 PF00571 CBS domain SDSE_RS20410 PF00781 Diacylglycerol kinase catalytic domain SDSE_RS20430 PF00596 Class II Aldolase and Adducin N-terminal domain SDSE_RS20435 PF01261 Xylose isomerase-like TIM barrel SDSE_RS20440 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family SDSE_RS20445 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SDSE_RS20450 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SDSE_RS20455 PF03611 PTS system sugar-specific permease component SDSE_RS20460 PF13603 Leucyl-tRNA synthetase, Domain 2 SDSE_RS20460 PF09334 tRNA synthetases class I (M) SDSE_RS20460 PF00133 tRNA synthetases class I (I, L, M and V) SDSE_RS20460 PF08264 Anticodon-binding domain of tRNA SDSE_RS20470 PF13936 Helix-turn-helix domain SDSE_RS20490 PF00664 ABC transporter transmembrane region SDSE_RS20490 PF00005 ABC transporter SDSE_RS20495 PF00899 ThiF family SDSE_RS20510 PF01289 Thiol-activated cytolysin SDSE_RS20510 PF17440 Thiol-activated cytolysin beta sandwich domain SDSE_RS20525 PF00467 KOW motif SDSE_RS20525 PF02357 Transcription termination factor nusG SDSE_RS20535 PF00905 Penicillin binding protein transpeptidase domain SDSE_RS20535 PF00912 Transglycosylase SDSE_RS20550 PF00849 RNA pseudouridylate synthase SDSE_RS20550 PF01479 S4 domain SDSE_RS20560 PF03577 Peptidase family C69 SDSE_RS20570 PF00118 TCP-1/cpn60 chaperonin family SDSE_RS20575 PF00166 Chaperonin 10 Kd subunit SDSE_RS20580 PF17871 AAA lid domain SDSE_RS20580 PF10431 C-terminal, D2-small domain, of ClpB protein SDSE_RS20580 PF07724 AAA domain (Cdc48 subfamily) SDSE_RS20580 PF02861 Clp amino terminal domain, pathogenicity island component SDSE_RS20580 PF00004 ATPase family associated with various cellular activities (AAA) SDSE_RS20585 PF17727 CtsR C-terminal dimerization domain SDSE_RS20585 PF05848 CtsR N-terminal HTH domain SDSE_RS20590 PF00313 'Cold-shock' DNA-binding domain SDSE_RS20615 PF13291 ACT domain SDSE_RS20615 PF02824 TGS domain SDSE_RS20615 PF04607 Region found in RelA / SpoT proteins SDSE_RS20635 PF00578 AhpC/TSA family SDSE_RS20640 PF13192 Thioredoxin domain SDSE_RS20640 PF07992 Pyridine nucleotide-disulphide oxidoreductase SDSE_RS20645 PF01979 Amidohydrolase family SDSE_RS20650 PF17392 Urocanase C-terminal domain SDSE_RS20650 PF01175 Urocanase Rossmann-like domain SDSE_RS20650 PF17391 Urocanase N-terminal domain SDSE_RS20655 PF02971 Formiminotransferase domain SDSE_RS20655 PF07837 Formiminotransferase domain, N-terminal subdomain SDSE_RS20660 PF04961 Formiminotransferase-cyclodeaminase SDSE_RS20665 PF01268 Formate--tetrahydrofolate ligase SDSE_RS20675 PF13520 Amino acid permease SDSE_RS20680 PF00221 Aromatic amino acid lyase SDSE_RS20685 PF00491 Arginase family SDSE_RS20695 PF00318 Ribosomal protein S2 SDSE_RS20700 PF00889 Elongation factor TS SDSE_RS20705 PF05649 Peptidase family M13 SDSE_RS20705 PF01431 Peptidase family M13 SDSE_RS20710 PF00128 Alpha amylase, catalytic domain SDSE_RS20710 PF16657 Maltogenic Amylase, C-terminal domain SDSE_RS20715 PF02378 Phosphotransferase system, EIIC SDSE_RS20715 PF00367 phosphotransferase system, EIIB SDSE_RS20720 PF07702 UTRA domain SDSE_RS20720 PF00392 Bacterial regulatory proteins, gntR family SDSE_RS20735 PF03883 Peroxide stress protein YaaA SDSE_RS20750 PF01408 Oxidoreductase family, NAD-binding Rossmann fold SDSE_RS20755 PF03477 ATP cone domain SDSE_RS20755 PF13597 Anaerobic ribonucleoside-triphosphate reductase SDSE_RS20765 PF06949 Protein of unknown function (DUF1292) SDSE_RS20770 PF03652 Holliday junction resolvase SDSE_RS20775 PF06135 IreB regulatory phosphoprotein SDSE_RS20780 PF03960 ArsC family SDSE_RS20790 PF00154 recA bacterial DNA recombination protein SDSE_RS20795 PF18146 Damage-inducible protein CinA KH domain SDSE_RS20795 PF00994 Probable molybdopterin binding domain SDSE_RS20795 PF02464 Competence-damaged protein SDSE_RS20805 PF00117 Glutamine amidotransferase class-I SDSE_RS20805 PF00958 GMP synthase C terminal domain SDSE_RS20805 PF03352 Methyladenine glycosylase SDSE_RS20805 PF13302 Acetyltransferase (GNAT) domain SDSE_RS20805 PF13673 Acetyltransferase (GNAT) domain SDSE_RS20810 PF01330 RuvA N terminal domain SDSE_RS20810 PF07499 RuvA, C-terminal domain SDSE_RS20815 PF07690 Major Facilitator Superfamily SDSE_RS20820 PF01119 DNA mismatch repair protein, C-terminal domain SDSE_RS20820 PF08676 MutL C terminal dimerisation domain SDSE_RS20825 PF00488 MutS domain V SDSE_RS20825 PF05188 MutS domain II SDSE_RS20825 PF05192 MutS domain III SDSE_RS20825 PF05190 MutS family domain IV SDSE_RS20825 PF01624 MutS domain I SDSE_RS20835 PF02863 Arginine repressor, C-terminal domain SDSE_RS20835 PF01316 Arginine repressor, DNA binding domain SDSE_RS20840 PF00750 tRNA synthetases class I (R) SDSE_RS20840 PF03485 Arginyl tRNA synthetase N terminal domain SDSE_RS20840 PF05746 DALR anticodon binding domain SDSE_RS20855 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 SDSE_RS20855 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) SDSE_RS20860 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) SDSE_RS20860 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 SDSE_RS20865 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 SDSE_RS20865 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) SDSE_RS20870 PF01336 OB-fold nucleic acid binding domain SDSE_RS20870 PF00152 tRNA synthetases class II (D, K and N) SDSE_RS20870 PF02938 GAD domain SDSE_RS20875 PF13393 Histidyl-tRNA synthetase SDSE_RS20875 PF03129 Anticodon binding domain SDSE_RS20880 PF01783 Ribosomal L32p protein family SDSE_RS20885 PF00471 Ribosomal protein L33 SDSE_RS20895 PF01022 Bacterial regulatory protein, arsR family SDSE_RS21080 PF14659 Phage integrase, N-terminal SAM-like domain SDSE_RS21080 PF00589 Phage integrase family SDSE_RS21085 PF01479 S4 domain SDSE_RS21085 PF00163 Ribosomal protein S4/S9 N-terminal domain SDSE_RS21095 PF13808 DDE_Tnp_1-associated SDSE_RS21095 PF01609 Transposase DDE domain SDSE_RS21100 PF01381 Helix-turn-helix SDSE_RS21100 PF00145 C-5 cytosine-specific DNA methylase SDSE_RS21110 PF03796 DnaB-like helicase C terminal domain SDSE_RS21110 PF00772 DnaB-like helicase N terminal domain SDSE_RS21115 PF03948 Ribosomal protein L9, C-terminal domain SDSE_RS21115 PF01281 Ribosomal protein L9, N-terminal domain SDSE_RS21120 PF02272 DHHA1 domain SDSE_RS21120 PF01368 DHH family SDSE_RS21125 PF01134 Glucose inhibited division protein A SDSE_RS21125 PF13932 GidA associated domain SDSE_RS21135 PF01914 MarC family integral membrane protein SDSE_RS21145 PF03315 Serine dehydratase beta chain SDSE_RS21145 PF01842 ACT domain SDSE_RS21150 PF03313 Serine dehydratase alpha chain SDSE_RS21155 PF13419 Haloacid dehalogenase-like hydrolase SDSE_RS21160 PF06737 Transglycosylase-like domain SDSE_RS21165 PF02361 Cobalt transport protein SDSE_RS21170 PF00005 ABC transporter SDSE_RS21175 PF00005 ABC transporter SDSE_RS21180 PF01066 CDP-alcohol phosphatidyltransferase SDSE_RS21190 PF05193 Peptidase M16 inactive domain SDSE_RS21190 PF00675 Insulinase (Peptidase family M16) SDSE_RS21205 PF02463 RecF/RecN/SMC N terminal domain SDSE_RS21210 PF06800 Sugar transport protein SDSE_RS21215 PF00478 IMP dehydrogenase / GMP reductase domain SDSE_RS21215 PF00571 CBS domain SDSE_RS21220 PF00579 tRNA synthetases class I (W and Y) SDSE_RS21225 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 SDSE_RS21225 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) SDSE_RS21230 PF00005 ABC transporter SDSE_RS21230 PF12848 ABC transporter SDSE_RS21250 PF13936 Helix-turn-helix domain SDSE_RS21260 PF02590 Predicted SPOUT methyltransferase SDSE_RS21265 PF13180 PDZ domain SDSE_RS21270 PF17762 HTH domain found in ParB protein SDSE_RS21270 PF02195 ParB-like nuclease domain