SDE12394_RS00005 PF00308 Bacterial dnaA protein SDE12394_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix SDE12394_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain SDE12394_RS00010 PF02767 DNA polymerase III beta subunit, central domain SDE12394_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain SDE12394_RS00015 PF06107 SDE12394_RS00015 SDE12394_RS00030 PF01926 50S ribosome-binding GTPase SDE12394_RS00030 PF06071 Protein of unknown function (DUF933) SDE12394_RS00035 PF01195 Peptidyl-tRNA hydrolase SDE12394_RS00040 PF00270 DEAD/DEAH box helicase SDE12394_RS00040 PF00271 Helicase conserved C-terminal domain SDE12394_RS00040 PF02559 CarD-like/TRCF domain SDE12394_RS00040 PF03461 TRCF domain SDE12394_RS00045 PF01943 SDE12394_RS00045 SDE12394_RS00045 PF14667 Polysaccharide biosynthesis C-terminal domain SDE12394_RS00050 PF01479 S4 domain SDE12394_RS00055 PF04977 Septum formation initiator SDE12394_RS00060 PF13354 Beta-lactamase enzyme family SDE12394_RS00065 PF01171 PP-loop family SDE12394_RS00070 PF00156 Phosphoribosyl transferase domain SDE12394_RS00075 PF00004 ATPase family associated with various cellular activities (AAA) SDE12394_RS00075 PF01434 Peptidase family M41 SDE12394_RS00075 PF06480 FtsH Extracellular SDE12394_RS00080 PF13520 Amino acid permease SDE12394_RS00085 PF13936 Helix-turn-helix domain SDE12394_RS00090 PF00665 Integrase core domain SDE12394_RS00090 PF13936 Helix-turn-helix domain SDE12394_RS00200 PF05257 CHAP domain SDE12394_RS00205 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase SDE12394_RS00205 PF14572 Phosphoribosyl synthetase-associated domain SDE12394_RS00210 PF02565 Recombination protein O C terminal SDE12394_RS00210 PF11967 Recombination protein O N terminal SDE12394_RS00215 PF02504 Fatty acid synthesis protein SDE12394_RS00220 PF00550 Phosphopantetheine attachment site SDE12394_RS00225 PF01259 SAICAR synthetase SDE12394_RS00230 PF02769 AIR synthase related protein, C-terminal domain SDE12394_RS00230 PF13507 CobB/CobQ-like glutamine amidotransferase domain SDE12394_RS00235 PF00156 Phosphoribosyl transferase domain SDE12394_RS00235 PF13537 Glutamine amidotransferase domain SDE12394_RS00240 PF00586 AIR synthase related protein, N-terminal domain SDE12394_RS00240 PF02769 AIR synthase related protein, C-terminal domain SDE12394_RS00245 PF00551 Formyl transferase SDE12394_RS00250 PF04892 SDE12394_RS00250 SDE12394_RS00255 PF01808 AICARFT/IMPCHase bienzyme SDE12394_RS00255 PF02142 MGS-like domain SDE12394_RS00260 PF05257 CHAP domain SDE12394_RS00260 PF08460 Bacterial SH3 domain SDE12394_RS00265 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain SDE12394_RS00265 PF02843 Phosphoribosylglycinamide synthetase, C domain SDE12394_RS00265 PF02844 Phosphoribosylglycinamide synthetase, N domain SDE12394_RS00270 PF00731 AIR carboxylase SDE12394_RS00275 PF02222 ATP-grasp domain SDE12394_RS00280 PF10544 SDE12394_RS00280 SDE12394_RS00280 PF13250 SDE12394_RS00280 SDE12394_RS00290 PF00206 Lyase SDE12394_RS00290 PF10397 Adenylosuccinate lyase C-terminus SDE12394_RS00295 PF12844 Helix-turn-helix domain SDE12394_RS00300 PF05491 Holliday junction DNA helicase ruvB C-terminus SDE12394_RS00300 PF05496 Holliday junction DNA helicase ruvB N-terminus SDE12394_RS00305 PF01451 Low molecular weight phosphotyrosine protein phosphatase SDE12394_RS00310 PF02493 MORN repeat SDE12394_RS00315 PF01757 SDE12394_RS00315 SDE12394_RS00320 PF00171 Aldehyde dehydrogenase family SDE12394_RS00320 PF00465 Iron-containing alcohol dehydrogenase SDE12394_RS00325 PF00107 Zinc-binding dehydrogenase SDE12394_RS00325 PF08240 Alcohol dehydrogenase GroES-like domain SDE12394_RS00330 PF00291 Pyridoxal-phosphate dependent enzyme SDE12394_RS00330 PF14821 Threonine synthase N terminus SDE12394_RS00335 PF01554 MatE SDE12394_RS00345 PF13936 Helix-turn-helix domain SDE12394_RS00350 PF00338 Ribosomal protein S10p/S20e SDE12394_RS00355 PF00297 Ribosomal protein L3 SDE12394_RS00360 PF00573 Ribosomal protein L4/L1 family SDE12394_RS00365 PF00276 Ribosomal protein L23 SDE12394_RS00370 PF00181 Ribosomal Proteins L2, RNA binding domain SDE12394_RS00370 PF03947 Ribosomal Proteins L2, C-terminal domain SDE12394_RS00375 PF00203 Ribosomal protein S19 SDE12394_RS00380 PF00237 Ribosomal protein L22p/L17e SDE12394_RS00385 PF00189 Ribosomal protein S3, C-terminal domain SDE12394_RS00385 PF07650 KH domain SDE12394_RS00390 PF00252 Ribosomal protein L16p/L10e SDE12394_RS00395 PF00831 Ribosomal L29 protein SDE12394_RS00400 PF00366 Ribosomal protein S17 SDE12394_RS00405 PF00238 Ribosomal protein L14p/L23e SDE12394_RS00410 PF00467 KOW motif SDE12394_RS00410 PF17136 SDE12394_RS00410 SDE12394_RS00415 PF00281 Ribosomal protein L5 SDE12394_RS00415 PF00673 ribosomal L5P family C-terminus SDE12394_RS00420 PF00253 Ribosomal protein S14p/S29e SDE12394_RS00425 PF00410 Ribosomal protein S8 SDE12394_RS00430 PF00347 Ribosomal protein L6 SDE12394_RS00435 PF00861 Ribosomal L18p/L5e family SDE12394_RS00440 PF00333 Ribosomal protein S5, N-terminal domain SDE12394_RS00440 PF03719 Ribosomal protein S5, C-terminal domain SDE12394_RS00445 PF00327 Ribosomal protein L30p/L7e SDE12394_RS00450 PF00828 Ribosomal protein L18e/L15 SDE12394_RS00455 PF00344 SecY translocase SDE12394_RS00460 PF00406 Adenylate kinase SDE12394_RS00465 PF01176 Translation initiation factor 1A / IF-1 SDE12394_RS00470 PF00416 Ribosomal protein S13/S18 SDE12394_RS00475 PF00411 Ribosomal protein S11 SDE12394_RS00480 PF01000 RNA polymerase Rpb3/RpoA insert domain SDE12394_RS00480 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain SDE12394_RS00480 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain SDE12394_RS00485 PF01196 Ribosomal protein L17 SDE12394_RS00490 PF13936 Helix-turn-helix domain SDE12394_RS00495 PF00665 Integrase core domain SDE12394_RS00495 PF13936 Helix-turn-helix domain SDE12394_RS00580 PF00293 NUDIX domain SDE12394_RS00585 PF01040 UbiA prenyltransferase family SDE12394_RS00590 PF07992 Pyridine nucleotide-disulphide oxidoreductase SDE12394_RS00595 PF01654 SDE12394_RS00595 SDE12394_RS00600 PF02322 SDE12394_RS00600 SDE12394_RS00605 PF00005 ABC transporter SDE12394_RS00605 PF00664 ABC transporter transmembrane region SDE12394_RS00610 PF00005 ABC transporter SDE12394_RS00610 PF00664 ABC transporter transmembrane region SDE12394_RS00615 PF00348 Polyprenyl synthetase SDE12394_RS00620 PF00288 GHMP kinases N terminal domain SDE12394_RS00620 PF08544 GHMP kinases C terminal SDE12394_RS00625 PF01047 MarR family SDE12394_RS00630 PF00005 ABC transporter SDE12394_RS00635 PF00950 SDE12394_RS00635 SDE12394_RS00640 PF00579 tRNA synthetases class I (W and Y) SDE12394_RS00640 PF01479 S4 domain SDE12394_RS00645 PF00905 Penicillin binding protein transpeptidase domain SDE12394_RS00645 PF00912 Transglycosylase SDE12394_RS00650 PF00562 RNA polymerase Rpb2, domain 6 SDE12394_RS00650 PF04560 RNA polymerase Rpb2, domain 7 SDE12394_RS00650 PF04561 RNA polymerase Rpb2, domain 2 SDE12394_RS00650 PF04563 RNA polymerase beta subunit SDE12394_RS00650 PF04565 RNA polymerase Rpb2, domain 3 SDE12394_RS00650 PF10385 RNA polymerase beta subunit external 1 domain SDE12394_RS00655 PF00623 RNA polymerase Rpb1, domain 2 SDE12394_RS00655 PF04983 RNA polymerase Rpb1, domain 3 SDE12394_RS00655 PF04997 RNA polymerase Rpb1, domain 1 SDE12394_RS00655 PF04998 RNA polymerase Rpb1, domain 5 SDE12394_RS00655 PF05000 RNA polymerase Rpb1, domain 4 SDE12394_RS00660 PF06279 SDE12394_RS00660 SDE12394_RS00665 PF00437 Type II/IV secretion system protein SDE12394_RS00670 PF00482 Type II secretion system (T2SS), protein F SDE12394_RS00675 PF07963 Prokaryotic N-terminal methylation motif SDE12394_RS00685 PF11773 SDE12394_RS00685 SDE12394_RS00690 PF15980 SDE12394_RS00690 SDE12394_RS00700 PF02384 N-6 DNA Methylase SDE12394_RS00705 PF00871 Acetokinase family SDE12394_RS00710 PF01381 Helix-turn-helix SDE12394_RS00715 PF02517 CAAX protease self-immunity SDE12394_RS00725 PF03807 NADP oxidoreductase coenzyme F420-dependent SDE12394_RS00725 PF14748 Pyrroline-5-carboxylate reductase dimerisation SDE12394_RS00730 PF05343 M42 glutamyl aminopeptidase SDE12394_RS00735 PF15513 Domain of unknown function (DUF4651) SDE12394_RS00740 PF00085 Thioredoxin SDE12394_RS00745 PF01588 Putative tRNA binding domain SDE12394_RS00745 PF14794 Domain of unknown function (DUF4479) SDE12394_RS00750 PF00436 Single-strand binding protein family SDE12394_RS00755 PF01712 Deoxynucleoside kinase SDE12394_RS00760 PF01207 Dihydrouridine synthase (Dus) SDE12394_RS00765 PF01430 Hsp33 protein SDE12394_RS00770 PF05043 Mga helix-turn-helix domain SDE12394_RS00770 PF08270 SDE12394_RS00770 SDE12394_RS00770 PF08280 M protein trans-acting positive regulator (MGA) HTH domain SDE12394_RS00775 PF16555 SDE12394_RS00775 SDE12394_RS00775 PF16569 SDE12394_RS00775 SDE12394_RS00780 PF05738 Cna protein B-type domain SDE12394_RS00785 PF04203 Sortase family SDE12394_RS00790 PF04203 Sortase family SDE12394_RS00795 PF05738 Cna protein B-type domain SDE12394_RS00795 PF10425 C-terminus of bacterial fibrinogen-binding adhesin SDE12394_RS00800 PF08348 SDE12394_RS00800 SDE12394_RS00800 PF13309 SDE12394_RS00800 SDE12394_RS00805 PF01042 Endoribonuclease L-PSP SDE12394_RS00810 PF13303 SDE12394_RS00810 SDE12394_RS00815 PF05816 SDE12394_RS00815 SDE12394_RS00825 PF00709 Adenylosuccinate synthetase SDE12394_RS00830 PF02608 Basic membrane protein SDE12394_RS00835 PF04055 Radical SAM superfamily SDE12394_RS00835 PF13353 4Fe-4S single cluster domain SDE12394_RS00840 PF00455 SDE12394_RS00840 SDE12394_RS00840 PF08220 DeoR-like helix-turn-helix domain SDE12394_RS00845 PF04198 Putative sugar-binding domain SDE12394_RS00850 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit SDE12394_RS00855 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SDE12394_RS00860 PF02378 Phosphotransferase system, EIIC SDE12394_RS00865 PF01228 Glycine radical SDE12394_RS00865 PF02901 Pyruvate formate lyase SDE12394_RS00870 PF00923 Transaldolase SDE12394_RS00875 PF00465 Iron-containing alcohol dehydrogenase SDE12394_RS00885 PF04608 Phosphatidylglycerophosphatase A SDE12394_RS00895 PF02016 LD-carboxypeptidase SDE12394_RS00905 PF04073 Aminoacyl-tRNA editing domain SDE12394_RS00910 PF13443 Cro/C1-type HTH DNA-binding domain SDE12394_RS00920 PF13454 FAD-NAD(P)-binding SDE12394_RS00925 PF00005 ABC transporter SDE12394_RS00940 PF02545 Maf-like protein SDE12394_RS00945 PF08951 Enterocin A Immunity SDE12394_RS00965 PF13673 Acetyltransferase (GNAT) domain SDE12394_RS00970 PF04055 Radical SAM superfamily SDE12394_RS00970 PF13353 4Fe-4S single cluster domain SDE12394_RS00975 PF00005 ABC transporter SDE12394_RS00975 PF00664 ABC transporter transmembrane region SDE12394_RS00985 PF04439 Streptomycin adenylyltransferase SDE12394_RS00990 PF00300 Histidine phosphatase superfamily (branch 1) SDE12394_RS00995 PF13673 Acetyltransferase (GNAT) domain SDE12394_RS01000 PF01381 Helix-turn-helix SDE12394_RS01030 PF01580 FtsK/SpoIIIE family SDE12394_RS01035 PF00910 RNA helicase SDE12394_RS01035 PF01719 Plasmid replication protein SDE12394_RS01040 PF05595 SDE12394_RS01040 SDE12394_RS01045 PF00589 Phage integrase family SDE12394_RS01055 PF00004 ATPase family associated with various cellular activities (AAA) SDE12394_RS01055 PF12002 MgsA AAA+ ATPase C terminal SDE12394_RS01055 PF16193 SDE12394_RS01055 SDE12394_RS01060 PF00117 Glutamine amidotransferase class-I SDE12394_RS01065 PF00425 chorismate binding enzyme SDE12394_RS01065 PF01063 Aminotransferase class IV SDE12394_RS01070 PF11217 Protein of unknown function (DUF3013) SDE12394_RS01075 PF06325 Ribosomal protein L11 methyltransferase (PrmA) SDE12394_RS01080 PF04452 RNA methyltransferase SDE12394_RS01085 PF00356 Bacterial regulatory proteins, lacI family SDE12394_RS01085 PF13377 Periplasmic binding protein-like domain SDE12394_RS01090 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 SDE12394_RS01090 PF00367 phosphotransferase system, EIIB SDE12394_RS01090 PF02378 Phosphotransferase system, EIIC SDE12394_RS01095 PF03372 Endonuclease/Exonuclease/phosphatase family SDE12394_RS01100 PF07931 Chloramphenicol phosphotransferase-like protein SDE12394_RS01105 PF05343 M42 glutamyl aminopeptidase SDE12394_RS01110 PF12822 Protein of unknown function (DUF3816) SDE12394_RS01115 PF01156 Inosine-uridine preferring nucleoside hydrolase SDE12394_RS01120 PF07972 NrdI Flavodoxin like SDE12394_RS01130 PF00746 SDE12394_RS01130 SDE12394_RS01130 PF02370 M protein repeat SDE12394_RS01130 PF04650 SDE12394_RS01130 SDE12394_RS01135 PF00149 Calcineurin-like phosphoesterase SDE12394_RS01135 PF00746 SDE12394_RS01135 SDE12394_RS01135 PF02872 5'-nucleotidase, C-terminal domain SDE12394_RS01140 PF02824 TGS domain SDE12394_RS01140 PF04607 Region found in RelA / SpoT proteins SDE12394_RS01140 PF13291 ACT domain SDE12394_RS01140 PF13328 HD domain SDE12394_RS01145 PF02580 D-Tyr-tRNA(Tyr) deacylase SDE12394_RS01150 PF02821 Staphylokinase/Streptokinase family SDE12394_RS01155 PF13556 PucR C-terminal helix-turn-helix domain SDE12394_RS01160 PF00005 ABC transporter SDE12394_RS01160 PF03459 TOBE domain SDE12394_RS01165 PF00128 Alpha amylase, catalytic domain SDE12394_RS01165 PF11941 Domain of unknown function (DUF3459) SDE12394_RS01170 PF00128 Alpha amylase, catalytic domain SDE12394_RS01170 PF00746 SDE12394_RS01170 SDE12394_RS01170 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) SDE12394_RS01170 PF03714 Bacterial pullanase-associated domain SDE12394_RS01170 PF04650 SDE12394_RS01170 SDE12394_RS01180 PF00085 Thioredoxin SDE12394_RS01185 PF02699 Preprotein translocase subunit SDE12394_RS01190 PF01255 Putative undecaprenyl diphosphate synthase SDE12394_RS01195 PF01148 Cytidylyltransferase family SDE12394_RS01200 PF02163 Peptidase family M50 SDE12394_RS01200 PF13180 PDZ domain SDE12394_RS01205 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SDE12394_RS01205 PF03129 Anticodon binding domain SDE12394_RS01205 PF04073 Aminoacyl-tRNA editing domain SDE12394_RS01210 PF06042 Bacterial protein of unknown function (DUF925) SDE12394_RS01215 PF00929 Exonuclease SDE12394_RS01215 PF02811 PHP domain SDE12394_RS01215 PF07733 Bacterial DNA polymerase III alpha subunit SDE12394_RS01215 PF11490 SDE12394_RS01215 SDE12394_RS01215 PF14480 SDE12394_RS01215 SDE12394_RS01215 PF14579 Helix-hairpin-helix motif SDE12394_RS01220 PF01047 MarR family SDE12394_RS01225 PF03358 NADPH-dependent FMN reductase SDE12394_RS01230 PF01327 Polypeptide deformylase SDE12394_RS01235 PF00027 Cyclic nucleotide-binding domain SDE12394_RS01235 PF13545 Crp-like helix-turn-helix domain SDE12394_RS01240 PF07690 Major Facilitator Superfamily SDE12394_RS01245 PF00312 Ribosomal protein S15 SDE12394_RS01260 PF00005 ABC transporter SDE12394_RS01270 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SDE12394_RS01270 PF00874 PRD domain SDE12394_RS01275 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SDE12394_RS01280 PF03611 SDE12394_RS01280 SDE12394_RS01285 PF00923 Transaldolase SDE12394_RS01290 PF00013 KH domain SDE12394_RS01290 PF00575 S1 RNA binding domain SDE12394_RS01290 PF01138 3' exoribonuclease family, domain 1 SDE12394_RS01290 PF03725 3' exoribonuclease family, domain 2 SDE12394_RS01290 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain SDE12394_RS01295 PF07179 SDE12394_RS01295 SDE12394_RS01300 PF00132 Bacterial transferase hexapeptide (six repeats) SDE12394_RS01310 PF01406 tRNA synthetases class I (C) catalytic domain SDE12394_RS01310 PF09190 DALR domain SDE12394_RS01315 PF00636 Ribonuclease III domain SDE12394_RS01325 PF13515 SDE12394_RS01325 SDE12394_RS01335 PF00588 SpoU rRNA Methylase family SDE12394_RS01335 PF08032 RNA 2'-O ribose methyltransferase substrate binding SDE12394_RS01340 PF05991 SDE12394_RS01340 SDE12394_RS01345 PF02645 Uncharacterised protein, DegV family COG1307 SDE12394_RS01355 PF01381 Helix-turn-helix SDE12394_RS01360 PF00665 Integrase core domain SDE12394_RS01360 PF13936 Helix-turn-helix domain SDE12394_RS01365 PF00572 Ribosomal protein L13 SDE12394_RS01370 PF00380 Ribosomal protein S9/S16 SDE12394_RS01375 PF00589 Phage integrase family SDE12394_RS01380 PF12728 Helix-turn-helix domain SDE12394_RS01400 PF12846 AAA-like domain SDE12394_RS01405 PF12648 SDE12394_RS01405 SDE12394_RS01415 PF12642 Conjugative transposon protein TcpC SDE12394_RS01430 PF01381 Helix-turn-helix SDE12394_RS01430 PF02486 SDE12394_RS01430 SDE12394_RS01435 PF06769 Plasmid encoded toxin Txe SDE12394_RS01440 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system SDE12394_RS01445 PF01580 FtsK/SpoIIIE family SDE12394_RS01465 PF01381 Helix-turn-helix SDE12394_RS01480 PF06114 Domain of unknown function (DUF955) SDE12394_RS01485 PF00717 Peptidase S24-like SDE12394_RS01485 PF01381 Helix-turn-helix SDE12394_RS01500 PF05147 Lanthionine synthetase C-like protein SDE12394_RS01505 PF05977 Transmembrane secretion effector SDE12394_RS01510 PF13749 ATP-dependent DNA helicase recG C-terminal SDE12394_RS01515 PF00589 Phage integrase family SDE12394_RS01530 PF03611 SDE12394_RS01530 SDE12394_RS01535 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SDE12394_RS01550 PF01894 Uncharacterised protein family UPF0047 SDE12394_RS01560 PF00665 Integrase core domain SDE12394_RS01560 PF13936 Helix-turn-helix domain SDE12394_RS01600 PF00696 Amino acid kinase family SDE12394_RS01600 PF13840 ACT domain SDE12394_RS01605 PF01416 tRNA pseudouridine synthase SDE12394_RS01610 PF08543 Phosphomethylpyrimidine kinase SDE12394_RS01615 PF07155 ECF-type riboflavin transporter, S component SDE12394_RS01620 PF04260 Protein of unknown function (DUF436) SDE12394_RS01625 PF00924 Mechanosensitive ion channel SDE12394_RS01630 PF00128 Alpha amylase, catalytic domain SDE12394_RS01635 PF00128 Alpha amylase, catalytic domain SDE12394_RS01640 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase SDE12394_RS01640 PF05697 Bacterial trigger factor protein (TF) SDE12394_RS01640 PF05698 Bacterial trigger factor protein (TF) C-terminus SDE12394_RS01645 PF05066 HB1, ASXL, restriction endonuclease HTH domain SDE12394_RS01650 PF00117 Glutamine amidotransferase class-I SDE12394_RS01650 PF06418 CTP synthase N-terminus SDE12394_RS01655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SDE12394_RS01655 PF06580 SDE12394_RS01655 SDE12394_RS01655 PF07694 5TMR of 5TMR-LYT SDE12394_RS01655 PF13492 GAF domain SDE12394_RS01660 PF00072 Response regulator receiver domain SDE12394_RS01660 PF04397 LytTr DNA-binding domain SDE12394_RS01665 PF03788 SDE12394_RS01665 SDE12394_RS01670 PF04172 SDE12394_RS01670 SDE12394_RS01675 PF12146 Putative lysophospholipase SDE12394_RS01685 PF01116 Fructose-bisphosphate aldolase class-II SDE12394_RS01690 PF00830 Ribosomal L28 family SDE12394_RS01695 PF03780 SDE12394_RS01695 SDE12394_RS01700 PF02734 DAK2 domain SDE12394_RS01700 PF13684 Dihydroxyacetone kinase family SDE12394_RS01705 PF01145 SPFH domain / Band 7 family SDE12394_RS01710 PF00005 ABC transporter SDE12394_RS01715 PF00497 Bacterial extracellular solute-binding proteins, family 3 SDE12394_RS01715 PF00528 Binding-protein-dependent transport system inner membrane component SDE12394_RS01720 PF09972 SDE12394_RS01720 SDE12394_RS01725 PF02673 SDE12394_RS01725 SDE12394_RS01730 PF05389 Negative regulator of genetic competence (MecA) SDE12394_RS01735 PF00953 Glycosyl transferase family 4 SDE12394_RS01740 PF00005 ABC transporter SDE12394_RS01745 PF01458 Uncharacterized protein family (UPF0051) SDE12394_RS01750 PF00266 Aminotransferase class-V SDE12394_RS01755 PF01592 NifU-like N terminal domain SDE12394_RS01760 PF01458 Uncharacterized protein family (UPF0051) SDE12394_RS01765 PF00768 D-alanyl-D-alanine carboxypeptidase SDE12394_RS01770 PF00665 Integrase core domain SDE12394_RS01770 PF13936 Helix-turn-helix domain SDE12394_RS01775 PF00768 D-alanyl-D-alanine carboxypeptidase SDE12394_RS01775 PF07943 Penicillin-binding protein 5, C-terminal domain SDE12394_RS01780 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SDE12394_RS01785 PF00528 Binding-protein-dependent transport system inner membrane component SDE12394_RS01790 PF00528 Binding-protein-dependent transport system inner membrane component SDE12394_RS01790 PF12911 SDE12394_RS01790 SDE12394_RS01795 PF00005 ABC transporter SDE12394_RS01795 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SDE12394_RS01800 PF00005 ABC transporter SDE12394_RS01800 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SDE12394_RS01805 PF13936 Helix-turn-helix domain SDE12394_RS01845 PF13936 Helix-turn-helix domain SDE12394_RS01850 PF13419 Haloacid dehalogenase-like hydrolase SDE12394_RS01855 PF01926 50S ribosome-binding GTPase SDE12394_RS01860 PF01985 CRS1 / YhbY (CRM) domain SDE12394_RS01865 PF01467 Cytidylyltransferase SDE12394_RS01870 PF01966 HD domain SDE12394_RS01880 PF02410 Oligomerisation domain SDE12394_RS01885 PF13649 Methyltransferase domain SDE12394_RS01890 PF05636 HIGH Nucleotidyl Transferase SDE12394_RS01895 PF07739 TipAS antibiotic-recognition domain SDE12394_RS01895 PF13411 MerR HTH family regulatory protein SDE12394_RS01910 PF04055 Radical SAM superfamily SDE12394_RS01910 PF06968 Biotin and Thiamin Synthesis associated domain SDE12394_RS01915 PF01709 Transcriptional regulator SDE12394_RS01920 PF00497 Bacterial extracellular solute-binding proteins, family 3 SDE12394_RS01925 PF03180 NLPA lipoprotein SDE12394_RS01930 PF03180 NLPA lipoprotein SDE12394_RS01940 PF00005 ABC transporter SDE12394_RS01940 PF09383 NIL domain SDE12394_RS01945 PF00528 Binding-protein-dependent transport system inner membrane component SDE12394_RS01950 PF05525 SDE12394_RS01950 SDE12394_RS01955 PF00375 Sodium:dicarboxylate symporter family SDE12394_RS01960 PF02254 TrkA-N domain SDE12394_RS01965 PF02386 Cation transport protein SDE12394_RS01970 PF02527 rRNA small subunit methyltransferase G SDE12394_RS01975 PF04011 LemA family SDE12394_RS01980 PF01435 Peptidase family M48 SDE12394_RS01985 PF02620 SDE12394_RS01985 SDE12394_RS01990 PF00072 Response regulator receiver domain SDE12394_RS01990 PF00486 Transcriptional regulatory protein, C terminal SDE12394_RS01995 PF00512 His Kinase A (phospho-acceptor) domain SDE12394_RS01995 PF00672 HAMP domain SDE12394_RS01995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SDE12394_RS02000 PF03477 ATP cone domain SDE12394_RS02010 PF01695 IstB-like ATP binding protein SDE12394_RS02010 PF07319 Primosomal protein DnaI N-terminus SDE12394_RS02015 PF01926 50S ribosome-binding GTPase SDE12394_RS02015 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal SDE12394_RS02020 PF00176 SNF2 family N-terminal domain SDE12394_RS02020 PF00271 Helicase conserved C-terminal domain SDE12394_RS02020 PF04434 SDE12394_RS02020 SDE12394_RS02020 PF08455 SDE12394_RS02020 SDE12394_RS02030 PF01225 Mur ligase family, catalytic domain SDE12394_RS02030 PF02875 Mur ligase family, glutamate ligase domain SDE12394_RS02030 PF08245 Mur ligase middle domain SDE12394_RS02035 PF13673 Acetyltransferase (GNAT) domain SDE12394_RS02040 PF02618 YceG-like family SDE12394_RS02045 PF01272 Transcription elongation factor, GreA/GreB, C-term SDE12394_RS02045 PF03449 Transcription elongation factor, N-terminal SDE12394_RS02050 PF02096 60Kd inner membrane protein SDE12394_RS02055 PF00708 Acylphosphatase SDE12394_RS02060 PF00588 SpoU rRNA Methylase family SDE12394_RS02060 PF08032 RNA 2'-O ribose methyltransferase substrate binding SDE12394_RS02070 PF01027 Inhibitor of apoptosis-promoting Bax1 SDE12394_RS02075 PF03672 SDE12394_RS02075 SDE12394_RS02080 PF01177 Asp/Glu/Hydantoin racemase SDE12394_RS02085 PF01725 Ham1 family SDE12394_RS02090 PF12850 Calcineurin-like phosphoesterase superfamily domain SDE12394_RS02095 PF00571 CBS domain SDE12394_RS02100 PF00589 Phage integrase family SDE12394_RS02105 PF02616 ScpA/B protein SDE12394_RS02110 PF04079 Putative transcriptional regulators (Ypuh-like) SDE12394_RS02115 PF00849 RNA pseudouridylate synthase SDE12394_RS02115 PF01479 S4 domain SDE12394_RS02120 PF13936 Helix-turn-helix domain SDE12394_RS02125 PF00588 SpoU rRNA Methylase family SDE12394_RS02130 PF12822 Protein of unknown function (DUF3816) SDE12394_RS02135 PF01569 PAP2 superfamily SDE12394_RS02140 PF04055 Radical SAM superfamily SDE12394_RS02140 PF16199 SDE12394_RS02140 SDE12394_RS02145 PF06962 Putative rRNA methylase SDE12394_RS02150 PF00571 CBS domain SDE12394_RS02150 PF01595 SDE12394_RS02150 SDE12394_RS02150 PF03471 Transporter associated domain SDE12394_RS02155 PF04055 Radical SAM superfamily SDE12394_RS02155 PF13353 4Fe-4S single cluster domain SDE12394_RS02160 PF01368 DHH family SDE12394_RS02160 PF02833 DHHA2 domain SDE12394_RS02165 PF08820 SDE12394_RS02165 SDE12394_RS02170 PF01032 FecCD transport family SDE12394_RS02175 PF01032 FecCD transport family SDE12394_RS02180 PF01497 Periplasmic binding protein SDE12394_RS02185 PF00005 ABC transporter SDE12394_RS02195 PF01943 SDE12394_RS02195 SDE12394_RS02195 PF14667 Polysaccharide biosynthesis C-terminal domain SDE12394_RS02200 PF13936 Helix-turn-helix domain SDE12394_RS02205 PF14681 Uracil phosphoribosyltransferase SDE12394_RS02210 PF00574 Clp protease SDE12394_RS02215 PF14131 Domain of unknown function (DUF4298) SDE12394_RS02220 PF06133 Protein of unknown function (DUF964) SDE12394_RS02225 PF09902 SDE12394_RS02225 SDE12394_RS02230 PF13458 Periplasmic binding protein SDE12394_RS02235 PF02653 SDE12394_RS02235 SDE12394_RS02240 PF02653 SDE12394_RS02240 SDE12394_RS02245 PF00005 ABC transporter SDE12394_RS02245 PF12399 Branched-chain amino acid ATP-binding cassette transporter SDE12394_RS02250 PF00005 ABC transporter SDE12394_RS02255 PF00571 CBS domain SDE12394_RS02260 PF02223 Thymidylate kinase SDE12394_RS02265 PF13177 DNA polymerase III, delta subunit SDE12394_RS02275 PF06156 SDE12394_RS02275 SDE12394_RS02280 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases SDE12394_RS02290 PF03932 CutC family SDE12394_RS02295 PF00266 Aminotransferase class-V SDE12394_RS02300 PF00583 Acetyltransferase (GNAT) family SDE12394_RS02305 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain SDE12394_RS02310 PF03960 ArsC family SDE12394_RS02320 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SDE12394_RS02325 PF00356 Bacterial regulatory proteins, lacI family SDE12394_RS02325 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family SDE12394_RS02330 PF08282 haloacid dehalogenase-like hydrolase SDE12394_RS02335 PF03372 Endonuclease/Exonuclease/phosphatase family SDE12394_RS02340 PF07853 SDE12394_RS02340 SDE12394_RS02340 PF13630 SDE12394_RS02340 SDE12394_RS02345 PF02652 SDE12394_RS02345 SDE12394_RS02350 PF01070 FMN-dependent dehydrogenase SDE12394_RS02365 PF06912 SDE12394_RS02365 SDE12394_RS02370 PF01588 Putative tRNA binding domain SDE12394_RS02370 PF09334 tRNA synthetases class I (M) SDE12394_RS02375 PF00268 Ribonucleotide reductase, small chain SDE12394_RS02380 PF07972 NrdI Flavodoxin like SDE12394_RS02385 PF00317 Ribonucleotide reductase, all-alpha domain SDE12394_RS02385 PF02867 Ribonucleotide reductase, barrel domain SDE12394_RS02385 PF08343 Ribonucleotide reductase N-terminal SDE12394_RS02390 PF05525 SDE12394_RS02390 SDE12394_RS02400 PF11195 SDE12394_RS02400 SDE12394_RS02405 PF13561 Enoyl-(Acyl carrier protein) reductase SDE12394_RS02410 PF13122 SDE12394_RS02410 SDE12394_RS02415 PF04266 ASCH domain SDE12394_RS02420 PF01408 Oxidoreductase family, NAD-binding Rossmann fold SDE12394_RS02420 PF02894 Oxidoreductase family, C-terminal alpha/beta domain SDE12394_RS02425 PF07690 Major Facilitator Superfamily SDE12394_RS02430 PF00132 Bacterial transferase hexapeptide (six repeats) SDE12394_RS02430 PF12804 MobA-like NTP transferase domain SDE12394_RS02435 PF00293 NUDIX domain SDE12394_RS02445 PF01048 Phosphorylase superfamily SDE12394_RS02450 PF01325 Iron dependent repressor, N-terminal DNA binding domain SDE12394_RS02450 PF02742 Iron dependent repressor, metal binding and dimerisation domain SDE12394_RS02450 PF04023 FeoA domain SDE12394_RS02455 PF01297 Periplasmic solute binding protein family SDE12394_RS02460 PF00005 ABC transporter SDE12394_RS02465 PF00950 SDE12394_RS02465 SDE12394_RS02470 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD SDE12394_RS02475 PF01580 FtsK/SpoIIIE family SDE12394_RS02475 PF09397 Ftsk gamma domain SDE12394_RS02480 PF11877 SDE12394_RS02480 SDE12394_RS02485 PF00298 Ribosomal protein L11, RNA binding domain SDE12394_RS02485 PF03946 Ribosomal protein L11, N-terminal domain SDE12394_RS02490 PF00687 Ribosomal protein L1p/L10e family SDE12394_RS02500 PF00696 Amino acid kinase family SDE12394_RS02505 PF01765 Ribosome recycling factor SDE12394_RS02510 PF13509 S1 domain SDE12394_RS02515 PF01625 Peptide methionine sulfoxide reductase SDE12394_RS02520 PF06855 Protein of unknown function (DUF1250) SDE12394_RS02525 PF01476 LysM domain SDE12394_RS02530 PF06100 Streptococcal 67 kDa myosin-cross-reactive antigen like family SDE12394_RS02535 PF02562 PhoH-like protein SDE12394_RS02540 PF03167 Uracil DNA glycosylase superfamily SDE12394_RS02545 PF02130 Uncharacterized protein family UPF0054 SDE12394_RS02550 PF01219 Prokaryotic diacylglycerol kinase SDE12394_RS02555 PF01926 50S ribosome-binding GTPase SDE12394_RS02555 PF07650 KH domain SDE12394_RS02590 PF01527 Transposase SDE12394_RS02610 PF00005 ABC transporter SDE12394_RS02610 PF00664 ABC transporter transmembrane region SDE12394_RS02610 PF03412 Peptidase C39 family SDE12394_RS02615 PF10439 SDE12394_RS02615 SDE12394_RS02635 PF13936 Helix-turn-helix domain SDE12394_RS02640 PF00665 Integrase core domain SDE12394_RS02640 PF13276 SDE12394_RS02640 SDE12394_RS02645 PF01527 Transposase SDE12394_RS02670 PF01381 Helix-turn-helix SDE12394_RS02675 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain SDE12394_RS02675 PF06827 Zinc finger found in FPG and IleRS SDE12394_RS02675 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain SDE12394_RS02680 PF01121 Dephospho-CoA kinase SDE12394_RS02685 PF00005 ABC transporter SDE12394_RS02695 PF05872 SDE12394_RS02695 SDE12394_RS02705 PF07690 Major Facilitator Superfamily SDE12394_RS02710 PF03840 Preprotein translocase SecG subunit SDE12394_RS02715 PF00575 S1 RNA binding domain SDE12394_RS02715 PF00773 RNB domain SDE12394_RS02715 PF08206 Ribonuclease B OB domain SDE12394_RS02720 PF01668 SmpB protein SDE12394_RS02730 PF00535 Glycosyl transferase family 2 SDE12394_RS02740 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SDE12394_RS02745 PF00881 Nitroreductase family SDE12394_RS02750 PF00557 Metallopeptidase family M24 SDE12394_RS02750 PF01321 Creatinase/Prolidase N-terminal domain SDE12394_RS02755 PF00356 Bacterial regulatory proteins, lacI family SDE12394_RS02755 PF13377 Periplasmic binding protein-like domain SDE12394_RS02760 PF00128 Alpha amylase, catalytic domain SDE12394_RS02760 PF09154 Domain of unknown function (DUF1939) SDE12394_RS02765 PF00534 Glycosyl transferases group 1 SDE12394_RS02765 PF13439 Glycosyltransferase Family 4 SDE12394_RS02770 PF00534 Glycosyl transferases group 1 SDE12394_RS02770 PF13439 Glycosyltransferase Family 4 SDE12394_RS02775 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SDE12394_RS02775 PF02824 TGS domain SDE12394_RS02775 PF03129 Anticodon binding domain SDE12394_RS02775 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain SDE12394_RS02780 PF00005 ABC transporter SDE12394_RS02785 PF06182 SDE12394_RS02785 SDE12394_RS02790 PF06182 SDE12394_RS02790 SDE12394_RS02795 PF02733 Dak1 domain SDE12394_RS02800 PF00440 Bacterial regulatory proteins, tetR family SDE12394_RS02805 PF02733 Dak1 domain SDE12394_RS02810 PF02734 DAK2 domain SDE12394_RS02815 PF03610 PTS system fructose IIA component SDE12394_RS02820 PF00230 Major intrinsic protein SDE12394_RS02835 PF00501 AMP-binding enzyme SDE12394_RS02840 PF11311 SDE12394_RS02840 SDE12394_RS02845 PF00528 Binding-protein-dependent transport system inner membrane component SDE12394_RS02850 PF00528 Binding-protein-dependent transport system inner membrane component SDE12394_RS02860 PF00005 ABC transporter SDE12394_RS02865 PF00072 Response regulator receiver domain SDE12394_RS02865 PF00486 Transcriptional regulatory protein, C terminal SDE12394_RS02870 PF00512 His Kinase A (phospho-acceptor) domain SDE12394_RS02870 PF00989 PAS fold SDE12394_RS02870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SDE12394_RS02875 PF12706 Beta-lactamase superfamily domain SDE12394_RS02885 PF02463 RecF/RecN/SMC N terminal domain SDE12394_RS02885 PF06470 SMC proteins Flexible Hinge Domain SDE12394_RS02890 PF04650 SDE12394_RS02890 SDE12394_RS02895 PF07554 Uncharacterised Sugar-binding Domain SDE12394_RS02900 PF08282 haloacid dehalogenase-like hydrolase SDE12394_RS02905 PF08282 haloacid dehalogenase-like hydrolase SDE12394_RS02910 PF00448 SRP54-type protein, GTPase domain SDE12394_RS02910 PF02881 SRP54-type protein, helical bundle domain SDE12394_RS02915 PF07690 Major Facilitator Superfamily SDE12394_RS02920 PF00874 PRD domain SDE12394_RS02920 PF03123 CAT RNA binding domain SDE12394_RS02925 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 SDE12394_RS02925 PF00367 phosphotransferase system, EIIB SDE12394_RS02925 PF02378 Phosphotransferase system, EIIC SDE12394_RS02930 PF00232 Glycosyl hydrolase family 1 SDE12394_RS02935 PF09323 SDE12394_RS02935 SDE12394_RS02940 PF03773 SDE12394_RS02940 SDE12394_RS02950 PF00293 NUDIX domain SDE12394_RS02955 PF06172 Cupin superfamily (DUF985) SDE12394_RS02960 PF00072 Response regulator receiver domain SDE12394_RS02960 PF00486 Transcriptional regulatory protein, C terminal SDE12394_RS02965 PF00512 His Kinase A (phospho-acceptor) domain SDE12394_RS02965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SDE12394_RS02970 PF12849 PBP superfamily domain SDE12394_RS02975 PF00528 Binding-protein-dependent transport system inner membrane component SDE12394_RS02980 PF00528 Binding-protein-dependent transport system inner membrane component SDE12394_RS02985 PF00005 ABC transporter SDE12394_RS02990 PF01895 PhoU domain SDE12394_RS03000 PF00575 S1 RNA binding domain SDE12394_RS03000 PF09371 Tex-like protein N-terminal domain SDE12394_RS03000 PF12836 Helix-hairpin-helix motif SDE12394_RS03000 PF16921 SDE12394_RS03000 SDE12394_RS03005 PF10263 SDE12394_RS03005 SDE12394_RS03010 PF04024 SDE12394_RS03010 SDE12394_RS03015 PF02603 HPr Serine kinase N terminus SDE12394_RS03015 PF07475 HPr Serine kinase C-terminal domain SDE12394_RS03020 PF01790 SDE12394_RS03020 SDE12394_RS03025 PF06103 SDE12394_RS03025 SDE12394_RS03030 PF12732 SDE12394_RS03030 SDE12394_RS03035 PF11674 SDE12394_RS03035 SDE12394_RS03040 PF01136 SDE12394_RS03040 SDE12394_RS03045 PF01136 SDE12394_RS03045 SDE12394_RS03045 PF16325 SDE12394_RS03045 SDE12394_RS03050 PF02229 Transcriptional Coactivator p15 (PC4) SDE12394_RS03060 PF13738 Pyridine nucleotide-disulphide oxidoreductase SDE12394_RS03065 PF00909 Ammonium Transporter Family SDE12394_RS03070 PF00589 Phage integrase family SDE12394_RS03070 PF02920 DNA binding domain of tn916 integrase SDE12394_RS03070 PF13495 Phage integrase, N-terminal SAM-like domain SDE12394_RS03075 PF09035 Excisionase from transposon Tn916 SDE12394_RS03080 PF05257 CHAP domain SDE12394_RS03090 PF05016 Plasmid stabilisation system protein SDE12394_RS03095 PF04221 RelB antitoxin SDE12394_RS03100 PF12846 AAA-like domain SDE12394_RS03105 PF12648 SDE12394_RS03105 SDE12394_RS03115 PF12642 Conjugative transposon protein TcpC SDE12394_RS03140 PF07275 Antirestriction protein (ArdA) SDE12394_RS03145 PF01381 Helix-turn-helix SDE12394_RS03145 PF02486 SDE12394_RS03145 SDE12394_RS03150 PF01580 FtsK/SpoIIIE family SDE12394_RS03170 PF01381 Helix-turn-helix SDE12394_RS03185 PF06114 Domain of unknown function (DUF955) SDE12394_RS03190 PF00717 Peptidase S24-like SDE12394_RS03190 PF01381 Helix-turn-helix SDE12394_RS03195 PF00817 impB/mucB/samB family SDE12394_RS03195 PF11798 IMS family HHH motif SDE12394_RS03195 PF11799 impB/mucB/samB family C-terminal domain SDE12394_RS03210 PF02384 N-6 DNA Methylase SDE12394_RS03215 PF02384 N-6 DNA Methylase SDE12394_RS03225 PF00152 tRNA synthetases class II (D, K and N) SDE12394_RS03225 PF01336 OB-fold nucleic acid binding domain SDE12394_RS03230 PF13419 Haloacid dehalogenase-like hydrolase SDE12394_RS03235 PF00300 Histidine phosphatase superfamily (branch 1) SDE12394_RS03240 PF03733 SDE12394_RS03240 SDE12394_RS03245 PF04073 Aminoacyl-tRNA editing domain SDE12394_RS03250 PF09515 Thiamine transporter protein (Thia_YuaJ) SDE12394_RS03255 PF01183 Glycosyl hydrolases family 25 SDE12394_RS03260 PF01548 SDE12394_RS03260 SDE12394_RS03260 PF02371 SDE12394_RS03260 SDE12394_RS03270 PF14478 Domain of unknown function (DUF4430) SDE12394_RS03275 PF00255 Glutathione peroxidase SDE12394_RS03280 PF01432 Peptidase family M3 SDE12394_RS03280 PF08439 Oligopeptidase F SDE12394_RS03285 PF00311 Phosphoenolpyruvate carboxylase SDE12394_RS03290 PF01098 SDE12394_RS03290 SDE12394_RS03295 PF04542 Sigma-70 region 2 SDE12394_RS03295 PF08281 Sigma-70, region 4 SDE12394_RS03300 PF13791 SDE12394_RS03300 SDE12394_RS03300 PF13800 SDE12394_RS03300 SDE12394_RS03305 PF00009 Elongation factor Tu GTP binding domain SDE12394_RS03305 PF03143 Elongation factor Tu C-terminal domain SDE12394_RS03305 PF03144 Elongation factor Tu domain 2 SDE12394_RS03320 PF13641 Glycosyltransferase like family 2 SDE12394_RS03325 PF13612 SDE12394_RS03325 SDE12394_RS03330 PF00121 Triosephosphate isomerase SDE12394_RS03335 PF00665 Integrase core domain SDE12394_RS03335 PF13276 SDE12394_RS03335 SDE12394_RS03340 PF01527 Transposase SDE12394_RS03350 PF13276 SDE12394_RS03350 SDE12394_RS03355 PF01527 Transposase SDE12394_RS03370 PF02388 FemAB family SDE12394_RS03375 PF08282 haloacid dehalogenase-like hydrolase SDE12394_RS03380 PF01966 HD domain SDE12394_RS03385 PF09148 Domain of unknown function (DUF1934) SDE12394_RS03390 PF00122 E1-E2 ATPase SDE12394_RS03390 PF00689 Cation transporting ATPase, C-terminus SDE12394_RS03390 PF00690 Cation transporter/ATPase, N-terminus SDE12394_RS03390 PF00702 haloacid dehalogenase-like hydrolase SDE12394_RS03400 PF00356 Bacterial regulatory proteins, lacI family SDE12394_RS03400 PF13407 Periplasmic binding protein domain SDE12394_RS03405 PF07940 Heparinase II/III-like protein SDE12394_RS03405 PF16889 SDE12394_RS03405 SDE12394_RS03410 PF03613 SDE12394_RS03410 SDE12394_RS03415 PF03609 SDE12394_RS03415 SDE12394_RS03420 PF03830 PTS system sorbose subfamily IIB component SDE12394_RS03425 PF07470 Glycosyl Hydrolase Family 88 SDE12394_RS03430 PF03610 PTS system fructose IIA component SDE12394_RS03435 PF13561 Enoyl-(Acyl carrier protein) reductase SDE12394_RS03440 PF02502 Ribose/Galactose Isomerase SDE12394_RS03440 PF12408 Ribose-5-phosphate isomerase SDE12394_RS03445 PF00294 pfkB family carbohydrate kinase SDE12394_RS03450 PF01081 KDPG and KHG aldolase SDE12394_RS03455 PF02278 Polysaccharide lyase family 8, super-sandwich domain SDE12394_RS03455 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain SDE12394_RS03455 PF08124 Polysaccharide lyase family 8, N terminal alpha-helical domain SDE12394_RS03470 PF13936 Helix-turn-helix domain SDE12394_RS03480 PF00899 ThiF family SDE12394_RS03485 PF00004 ATPase family associated with various cellular activities (AAA) SDE12394_RS03490 PF07690 Major Facilitator Superfamily SDE12394_RS03495 PF01527 Transposase SDE12394_RS03500 PF13419 Haloacid dehalogenase-like hydrolase SDE12394_RS03510 PF08331 SDE12394_RS03510 SDE12394_RS03510 PF13484 SDE12394_RS03510 SDE12394_RS03515 PF00472 RF-1 domain SDE12394_RS03515 PF03462 PCRF domain SDE12394_RS03520 PF00005 ABC transporter SDE12394_RS03525 PF02687 SDE12394_RS03525 SDE12394_RS03530 PF00753 Metallo-beta-lactamase superfamily SDE12394_RS03535 PF00270 DEAD/DEAH box helicase SDE12394_RS03535 PF00929 Exonuclease SDE12394_RS03535 PF13307 Helicase C-terminal domain SDE12394_RS03540 PF00155 Aminotransferase class I and II SDE12394_RS03545 PF00152 tRNA synthetases class II (D, K and N) SDE12394_RS03545 PF01336 OB-fold nucleic acid binding domain SDE12394_RS03555 PF03668 SDE12394_RS03555 SDE12394_RS03560 PF01933 Uncharacterised protein family UPF0052 SDE12394_RS03570 PF03577 SDE12394_RS03570 SDE12394_RS03575 PF01297 Periplasmic solute binding protein family SDE12394_RS03575 PF09223 YodA lipocalin-like domain SDE12394_RS03580 PF00392 Bacterial regulatory proteins, gntR family SDE12394_RS03580 PF07702 UTRA domain SDE12394_RS03585 PF01380 SIS domain SDE12394_RS03590 PF01791 DeoC/LacD family aldolase SDE12394_RS03595 PF00392 Bacterial regulatory proteins, gntR family SDE12394_RS03595 PF07702 UTRA domain SDE12394_RS03600 PF01301 Glycosyl hydrolases family 35 SDE12394_RS03605 PF03830 PTS system sorbose subfamily IIB component SDE12394_RS03610 PF03609 SDE12394_RS03610 SDE12394_RS03615 PF03613 SDE12394_RS03615 SDE12394_RS03620 PF03610 PTS system fructose IIA component SDE12394_RS03625 PF01197 Ribosomal protein L31 SDE12394_RS03630 PF00665 Integrase core domain SDE12394_RS03630 PF13936 Helix-turn-helix domain SDE12394_RS03635 PF01368 DHH family SDE12394_RS03635 PF02272 DHHA1 domain SDE12394_RS03640 PF13673 Acetyltransferase (GNAT) domain SDE12394_RS03645 PF02798 Glutathione S-transferase, N-terminal domain SDE12394_RS03645 PF13410 Glutathione S-transferase, C-terminal domain SDE12394_RS03650 PF00962 Adenosine/AMP deaminase SDE12394_RS03655 PF00258 Flavodoxin SDE12394_RS03660 PF01817 Chorismate mutase type II SDE12394_RS03665 PF00654 Voltage gated chloride channel SDE12394_RS03670 PF01245 Ribosomal protein L19 SDE12394_RS03680 PF01098 SDE12394_RS03680 SDE12394_RS03685 PF13419 Haloacid dehalogenase-like hydrolase SDE12394_RS03695 PF06160 SDE12394_RS03695 SDE12394_RS03700 PF12710 haloacid dehalogenase-like hydrolase SDE12394_RS03705 PF07997 Protein of unknown function (DUF1694) SDE12394_RS03710 PF00113 Enolase, C-terminal TIM barrel domain SDE12394_RS03710 PF03952 Enolase, N-terminal domain SDE12394_RS03715 PF00881 Nitroreductase family SDE12394_RS03725 PF02624 YcaO-like family SDE12394_RS03730 PF02517 CAAX protease self-immunity SDE12394_RS03740 PF00005 ABC transporter SDE12394_RS03745 PF12698 ABC-2 family transporter protein SDE12394_RS03750 PF12698 ABC-2 family transporter protein SDE12394_RS03755 PF03372 Endonuclease/Exonuclease/phosphatase family SDE12394_RS03760 PF06177 SDE12394_RS03760 SDE12394_RS03765 PF00533 BRCA1 C Terminus (BRCT) domain SDE12394_RS03765 PF01653 NAD-dependent DNA ligase adenylation domain SDE12394_RS03765 PF03119 NAD-dependent DNA ligase C4 zinc finger domain SDE12394_RS03765 PF03120 NAD-dependent DNA ligase OB-fold domain SDE12394_RS03765 PF12826 Helix-hairpin-helix motif SDE12394_RS03765 PF14520 Helix-hairpin-helix domain SDE12394_RS03770 PF00781 Diacylglycerol kinase catalytic domain SDE12394_RS03775 PF00128 Alpha amylase, catalytic domain SDE12394_RS03775 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) SDE12394_RS03775 PF03714 Bacterial pullanase-associated domain SDE12394_RS03780 PF00128 Alpha amylase, catalytic domain SDE12394_RS03780 PF02806 Alpha amylase, C-terminal all-beta domain SDE12394_RS03780 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) SDE12394_RS03790 PF00483 Nucleotidyl transferase SDE12394_RS03795 PF00534 Glycosyl transferases group 1 SDE12394_RS03795 PF08323 Starch synthase catalytic domain SDE12394_RS03800 PF00137 ATP synthase subunit C SDE12394_RS03805 PF00119 ATP synthase A chain SDE12394_RS03810 PF00430 ATP synthase B/B' CF(0) SDE12394_RS03815 PF00213 ATP synthase delta (OSCP) subunit SDE12394_RS03820 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SDE12394_RS03820 PF00306 ATP synthase alpha/beta chain, C terminal domain SDE12394_RS03820 PF02874 ATP synthase alpha/beta family, beta-barrel domain SDE12394_RS03825 PF00231 ATP synthase SDE12394_RS03830 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SDE12394_RS03830 PF02874 ATP synthase alpha/beta family, beta-barrel domain SDE12394_RS03835 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain SDE12394_RS03835 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain SDE12394_RS03840 PF06612 SDE12394_RS03840 SDE12394_RS03845 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) SDE12394_RS03850 PF11772 SDE12394_RS03850 SDE12394_RS03855 PF01223 DNA/RNA non-specific endonuclease SDE12394_RS03860 PF01409 tRNA synthetases class II core domain (F) SDE12394_RS03860 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain SDE12394_RS03865 PF01588 Putative tRNA binding domain SDE12394_RS03865 PF03147 Ferredoxin-fold anticodon binding domain SDE12394_RS03865 PF03483 B3/4 domain SDE12394_RS03865 PF03484 tRNA synthetase B5 domain SDE12394_RS03870 PF02566 OsmC-like protein SDE12394_RS03880 PF02687 SDE12394_RS03880 SDE12394_RS03885 PF00005 ABC transporter SDE12394_RS03890 PF04228 SDE12394_RS03890 SDE12394_RS03900 PF00580 UvrD/REP helicase N-terminal domain SDE12394_RS03900 PF12705 PD-(D/E)XK nuclease superfamily SDE12394_RS03900 PF13361 UvrD-like helicase C-terminal domain SDE12394_RS03905 PF00155 Aminotransferase class I and II SDE12394_RS03910 PF00497 Bacterial extracellular solute-binding proteins, family 3 SDE12394_RS03915 PF01165 Ribosomal protein S21 SDE12394_RS03920 PF01741 Large-conductance mechanosensitive channel, MscL SDE12394_RS03930 PF00140 Sigma-70 factor, region 1 SDE12394_RS03930 PF03979 Sigma-70 factor, region 1 SDE12394_RS03930 PF04539 Sigma-70 region 3 SDE12394_RS03930 PF04542 Sigma-70 region 2 SDE12394_RS03930 PF04545 Sigma-70, region 4 SDE12394_RS03935 PF01883 Domain of unknown function DUF59 SDE12394_RS03940 PF04321 RmlD substrate binding domain SDE12394_RS03945 PF09314 SDE12394_RS03945 SDE12394_RS03950 PF00535 Glycosyl transferase family 2 SDE12394_RS03955 PF01061 SDE12394_RS03955 SDE12394_RS03960 PF00005 ABC transporter SDE12394_RS03960 PF14524 Wzt C-terminal domain SDE12394_RS03975 PF00535 Glycosyl transferase family 2 SDE12394_RS03990 PF00535 Glycosyl transferase family 2 SDE12394_RS03995 PF10066 SDE12394_RS03995 SDE12394_RS04000 PF00884 Sulfatase SDE12394_RS04005 PF16363 SDE12394_RS04005 SDE12394_RS04010 PF01943 SDE12394_RS04010 SDE12394_RS04015 PF01546 Peptidase family M20/M25/M40 SDE12394_RS04015 PF07687 Peptidase dimerisation domain SDE12394_RS04025 PF13459 4Fe-4S single cluster domain SDE12394_RS04035 PF02224 Cytidylate kinase SDE12394_RS04040 PF00707 Translation initiation factor IF-3, C-terminal domain SDE12394_RS04040 PF05198 Translation initiation factor IF-3, N-terminal domain SDE12394_RS04045 PF01632 Ribosomal protein L35 SDE12394_RS04050 PF00453 Ribosomal protein L20 SDE12394_RS04060 PF10672 S-adenosylmethionine-dependent methyltransferase SDE12394_RS04065 PF01487 Type I 3-dehydroquinase SDE12394_RS04070 PF01264 Chorismate synthase SDE12394_RS04075 PF06133 Protein of unknown function (DUF964) SDE12394_RS04080 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SDE12394_RS04080 PF07992 Pyridine nucleotide-disulphide oxidoreductase SDE12394_RS04085 PF08245 Mur ligase middle domain SDE12394_RS04095 PF00266 Aminotransferase class-V SDE12394_RS04100 PF02568 Thiamine biosynthesis protein (ThiI) SDE12394_RS04100 PF02926 THUMP domain SDE12394_RS04105 PF09587 Bacterial capsule synthesis protein PGA_cap SDE12394_RS04120 PF04327 Protein of unknown function (DUF464) SDE12394_RS04125 PF01016 Ribosomal L27 protein SDE12394_RS04130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SDE12394_RS04130 PF03466 LysR substrate binding domain SDE12394_RS04135 PF01252 SDE12394_RS04135 SDE12394_RS04140 PF00849 RNA pseudouridylate synthase SDE12394_RS04140 PF01479 S4 domain SDE12394_RS04145 PF09335 SDE12394_RS04145 SDE12394_RS04150 PF00156 Phosphoribosyl transferase domain SDE12394_RS04155 PF00860 Permease family SDE12394_RS04160 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain SDE12394_RS04160 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain SDE12394_RS04165 PF00117 Glutamine amidotransferase class-I SDE12394_RS04165 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain SDE12394_RS04170 PF02142 MGS-like domain SDE12394_RS04170 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain SDE12394_RS04170 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain SDE12394_RS04175 PF16576 SDE12394_RS04175 SDE12394_RS04180 PF00005 ABC transporter SDE12394_RS04185 PF02687 SDE12394_RS04185 SDE12394_RS04185 PF12704 MacB-like periplasmic core domain SDE12394_RS04190 PF09335 SDE12394_RS04190 SDE12394_RS04200 PF00886 Ribosomal protein S16 SDE12394_RS04205 PF13083 KH domain SDE12394_RS04215 PF01782 RimM N-terminal domain SDE12394_RS04215 PF05239 PRC-barrel domain SDE12394_RS04220 PF01746 tRNA (Guanine-1)-methyltransferase SDE12394_RS04225 PF07992 Pyridine nucleotide-disulphide oxidoreductase SDE12394_RS04230 PF13303 SDE12394_RS04230 SDE12394_RS04235 PF02558 Ketopantoate reductase PanE/ApbA SDE12394_RS04235 PF08546 Ketopantoate reductase PanE/ApbA C terminal SDE12394_RS04240 PF00455 SDE12394_RS04240 SDE12394_RS04240 PF08220 DeoR-like helix-turn-helix domain SDE12394_RS04245 PF00294 pfkB family carbohydrate kinase SDE12394_RS04250 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SDE12394_RS04250 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SDE12394_RS04250 PF02378 Phosphotransferase system, EIIC SDE12394_RS04255 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase SDE12394_RS04260 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase SDE12394_RS04270 PF06619 Protein of unknown function (DUF1149) SDE12394_RS04275 PF02645 Uncharacterised protein, DegV family COG1307 SDE12394_RS04280 PF01743 Poly A polymerase head domain SDE12394_RS04280 PF12627 Probable RNA and SrmB- binding site of polymerase A SDE12394_RS04280 PF13735 tRNA nucleotidyltransferase domain 2 putative SDE12394_RS04285 PF00005 ABC transporter SDE12394_RS04285 PF12848 ABC transporter SDE12394_RS04285 PF16326 SDE12394_RS04285 SDE12394_RS04290 PF00005 ABC transporter SDE12394_RS04290 PF00664 ABC transporter transmembrane region SDE12394_RS04295 PF00005 ABC transporter SDE12394_RS04295 PF00664 ABC transporter transmembrane region SDE12394_RS04300 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase SDE12394_RS04300 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain SDE12394_RS04305 PF01327 Polypeptide deformylase SDE12394_RS04310 PF00149 Calcineurin-like phosphoesterase SDE12394_RS04310 PF02872 5'-nucleotidase, C-terminal domain SDE12394_RS04320 PF00072 Response regulator receiver domain SDE12394_RS04320 PF00486 Transcriptional regulatory protein, C terminal SDE12394_RS04325 PF00512 His Kinase A (phospho-acceptor) domain SDE12394_RS04325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SDE12394_RS04330 PF00288 GHMP kinases N terminal domain SDE12394_RS04330 PF08544 GHMP kinases C terminal SDE12394_RS04335 PF00288 GHMP kinases N terminal domain SDE12394_RS04335 PF08544 GHMP kinases C terminal SDE12394_RS04345 PF01070 FMN-dependent dehydrogenase SDE12394_RS04350 PF05043 Mga helix-turn-helix domain SDE12394_RS04350 PF08270 SDE12394_RS04350 SDE12394_RS04355 PF00746 SDE12394_RS04355 SDE12394_RS04355 PF02986 Fibronectin binding repeat SDE12394_RS04355 PF06458 MucBP domain SDE12394_RS04370 PF00368 Hydroxymethylglutaryl-coenzyme A reductase SDE12394_RS04375 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal SDE12394_RS04375 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III SDE12394_RS04380 PF00303 Thymidylate synthase SDE12394_RS04385 PF00186 Dihydrofolate reductase SDE12394_RS04395 PF06689 ClpX C4-type zinc finger SDE12394_RS04395 PF07724 AAA domain (Cdc48 subfamily) SDE12394_RS04395 PF10431 C-terminal, D2-small domain, of ClpB protein SDE12394_RS04400 PF01926 50S ribosome-binding GTPase SDE12394_RS04410 PF00004 ATPase family associated with various cellular activities (AAA) SDE12394_RS04410 PF07724 AAA domain (Cdc48 subfamily) SDE12394_RS04410 PF10431 C-terminal, D2-small domain, of ClpB protein SDE12394_RS04415 PF00466 Ribosomal protein L10 SDE12394_RS04420 PF00542 Ribosomal protein L7/L12 C-terminal domain SDE12394_RS04420 PF16320 SDE12394_RS04420 SDE12394_RS04425 PF06970 Replication initiator protein A (RepA) N-terminus SDE12394_RS04430 PF00145 C-5 cytosine-specific DNA methylase SDE12394_RS04450 PF02517 CAAX protease self-immunity SDE12394_RS04460 PF02534 Type IV secretory system Conjugative DNA transfer SDE12394_RS04475 PF12666 SDE12394_RS04475 SDE12394_RS04485 PF05257 CHAP domain SDE12394_RS04490 PF08843 Nucleotidyl transferase of unknown function (DUF1814) SDE12394_RS04495 PF13338 SDE12394_RS04495 SDE12394_RS04500 PF08363 Glucan-binding protein C SDE12394_RS04500 PF16364 SDE12394_RS04500 SDE12394_RS04515 PF00176 SNF2 family N-terminal domain SDE12394_RS04515 PF00271 Helicase conserved C-terminal domain SDE12394_RS04515 PF02384 N-6 DNA Methylase SDE12394_RS04535 PF13154 SDE12394_RS04535 SDE12394_RS04535 PF13155 Toprim-like SDE12394_RS04565 PF00817 impB/mucB/samB family SDE12394_RS04565 PF11798 IMS family HHH motif SDE12394_RS04565 PF11799 impB/mucB/samB family C-terminal domain SDE12394_RS04570 PF00717 Peptidase S24-like SDE12394_RS04570 PF01381 Helix-turn-helix SDE12394_RS04585 PF03596 SDE12394_RS04585 SDE12394_RS04590 PF03965 Penicillinase repressor SDE12394_RS04595 PF00702 haloacid dehalogenase-like hydrolase SDE12394_RS04600 PF00403 Heavy-metal-associated domain SDE12394_RS04605 PF00122 E1-E2 ATPase SDE12394_RS04605 PF00702 haloacid dehalogenase-like hydrolase SDE12394_RS04610 PF07314 SDE12394_RS04610 SDE12394_RS04625 PF01022 Bacterial regulatory protein, arsR family SDE12394_RS04635 PF13333 SDE12394_RS04635 SDE12394_RS04650 PF05713 SDE12394_RS04650 SDE12394_RS04655 PF03432 SDE12394_RS04655 SDE12394_RS04655 PF11083 SDE12394_RS04655 SDE12394_RS04660 PF01381 Helix-turn-helix SDE12394_RS04665 PF11372 SDE12394_RS04665 SDE12394_RS04670 PF00589 Phage integrase family SDE12394_RS04670 PF14659 Phage integrase, N-terminal SAM-like domain SDE12394_RS04675 PF00768 D-alanyl-D-alanine carboxypeptidase SDE12394_RS04675 PF07943 Penicillin-binding protein 5, C-terminal domain SDE12394_RS04680 PF01522 Polysaccharide deacetylase SDE12394_RS04685 PF00742 Homoserine dehydrogenase SDE12394_RS04685 PF03447 Homoserine dehydrogenase, NAD binding domain SDE12394_RS04690 PF00288 GHMP kinases N terminal domain SDE12394_RS04690 PF08544 GHMP kinases C terminal SDE12394_RS04695 PF08245 Mur ligase middle domain SDE12394_RS04700 PF01227 GTP cyclohydrolase I SDE12394_RS04705 PF00809 Pterin binding enzyme SDE12394_RS04710 PF02152 Dihydroneopterin aldolase SDE12394_RS04715 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) SDE12394_RS04720 PF01565 FAD binding domain SDE12394_RS04720 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain SDE12394_RS04725 PF00005 ABC transporter SDE12394_RS04725 PF08402 TOBE domain SDE12394_RS04730 PF00528 Binding-protein-dependent transport system inner membrane component SDE12394_RS04735 PF00528 Binding-protein-dependent transport system inner membrane component SDE12394_RS04740 PF13416 Bacterial extracellular solute-binding protein SDE12394_RS04745 PF00072 Response regulator receiver domain SDE12394_RS04750 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain SDE12394_RS04750 PF17203 SDE12394_RS04750 SDE12394_RS04755 PF03390 SDE12394_RS04755 SDE12394_RS04760 PF00390 Malic enzyme, N-terminal domain SDE12394_RS04760 PF03949 Malic enzyme, NAD binding domain SDE12394_RS04765 PF00654 Voltage gated chloride channel SDE12394_RS04770 PF02311 AraC-like ligand binding domain SDE12394_RS04770 PF12833 Helix-turn-helix domain SDE12394_RS04775 PF13472 GDSL-like Lipase/Acylhydrolase family SDE12394_RS04780 PF01594 SDE12394_RS04780 SDE12394_RS04785 PF04002 RadC-like JAB domain SDE12394_RS04790 PF07722 Peptidase C26 SDE12394_RS04795 PF02629 CoA binding domain SDE12394_RS04795 PF06971 Putative DNA-binding protein N-terminus SDE12394_RS04800 PF15507 Domain of unknown function (DUF4649) SDE12394_RS04805 PF08866 Putative amino acid metabolism SDE12394_RS04810 PF00266 Aminotransferase class-V SDE12394_RS04815 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase SDE12394_RS04815 PF14572 Phosphoribosyl synthetase-associated domain SDE12394_RS04820 PF01928 CYTH domain SDE12394_RS04830 PF01513 ATP-NAD kinase SDE12394_RS04840 PF01515 Phosphate acetyl/butaryl transferase SDE12394_RS04845 PF00106 short chain dehydrogenase SDE12394_RS04855 PF00005 ABC transporter SDE12394_RS04860 PF00528 Binding-protein-dependent transport system inner membrane component SDE12394_RS04860 PF04069 Substrate binding domain of ABC-type glycine betaine transport system SDE12394_RS04865 PF00478 IMP dehydrogenase / GMP reductase domain SDE12394_RS04870 PF00156 Phosphoribosyl transferase domain SDE12394_RS04875 PF00860 Permease family SDE12394_RS04880 PF02424 ApbE family SDE12394_RS04885 PF01361 Tautomerase enzyme SDE12394_RS04890 PF00265 Thymidine kinase SDE12394_RS04895 PF00472 RF-1 domain SDE12394_RS04895 PF03462 PCRF domain SDE12394_RS04900 PF05175 Methyltransferase small domain SDE12394_RS04905 PF01300 Telomere recombination SDE12394_RS04910 PF00583 Acetyltransferase (GNAT) family SDE12394_RS04915 PF00464 Serine hydroxymethyltransferase SDE12394_RS04925 PF13702 Lysozyme-like SDE12394_RS04930 PF00005 ABC transporter SDE12394_RS04930 PF00664 ABC transporter transmembrane region SDE12394_RS04935 PF00005 ABC transporter SDE12394_RS04935 PF00664 ABC transporter transmembrane region SDE12394_RS04940 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SDE12394_RS04940 PF07992 Pyridine nucleotide-disulphide oxidoreductase SDE12394_RS04945 PF01872 RibD C-terminal domain SDE12394_RS04950 PF00056 lactate/malate dehydrogenase, NAD binding domain SDE12394_RS04950 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain SDE12394_RS04955 PF00521 DNA gyrase/topoisomerase IV, subunit A SDE12394_RS04955 PF03989 DNA gyrase C-terminal domain, beta-propeller SDE12394_RS04960 PF04203 Sortase family SDE12394_RS04965 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SDE12394_RS04975 PF01297 Periplasmic solute binding protein family SDE12394_RS04980 PF01297 Periplasmic solute binding protein family SDE12394_RS04990 PF06207 SDE12394_RS04990 SDE12394_RS04995 PF00665 Integrase core domain SDE12394_RS04995 PF13276 SDE12394_RS04995 SDE12394_RS05000 PF01527 Transposase SDE12394_RS05015 PF00005 ABC transporter SDE12394_RS05020 PF02687 SDE12394_RS05020 SDE12394_RS05020 PF12704 MacB-like periplasmic core domain SDE12394_RS05025 PF00072 Response regulator receiver domain SDE12394_RS05025 PF00486 Transcriptional regulatory protein, C terminal SDE12394_RS05035 PF05257 CHAP domain SDE12394_RS05065 PF01297 Periplasmic solute binding protein family SDE12394_RS05070 PF04270 Streptococcal histidine triad protein SDE12394_RS05075 PF05532 CsbD-like SDE12394_RS05080 PF00005 ABC transporter SDE12394_RS05085 PF00005 ABC transporter SDE12394_RS05090 PF00528 Binding-protein-dependent transport system inner membrane component SDE12394_RS05095 PF00528 Binding-protein-dependent transport system inner membrane component SDE12394_RS05100 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SDE12394_RS05105 PF01527 Transposase SDE12394_RS05110 PF00665 Integrase core domain SDE12394_RS05110 PF13276 SDE12394_RS05110 SDE12394_RS05115 PF13936 Helix-turn-helix domain SDE12394_RS05120 PF02388 FemAB family SDE12394_RS05125 PF00999 Sodium/hydrogen exchanger family SDE12394_RS05130 PF05598 SDE12394_RS05130 SDE12394_RS05130 PF13751 SDE12394_RS05130 SDE12394_RS05135 PF00117 Glutamine amidotransferase class-I SDE12394_RS05135 PF00958 GMP synthase C terminal domain SDE12394_RS05135 PF02540 NAD synthase SDE12394_RS05145 PF00392 Bacterial regulatory proteins, gntR family SDE12394_RS05145 PF07702 UTRA domain SDE12394_RS05150 PF04297 Putative helix-turn-helix protein, YlxM / p13 like SDE12394_RS05155 PF00448 SRP54-type protein, GTPase domain SDE12394_RS05155 PF02881 SRP54-type protein, helical bundle domain SDE12394_RS05155 PF02978 Signal peptide binding domain SDE12394_RS05170 PF00717 Peptidase S24-like SDE12394_RS05170 PF01381 Helix-turn-helix SDE12394_RS05175 PF01408 Oxidoreductase family, NAD-binding Rossmann fold SDE12394_RS05175 PF02894 Oxidoreductase family, C-terminal alpha/beta domain SDE12394_RS05185 PF00512 His Kinase A (phospho-acceptor) domain SDE12394_RS05185 PF00672 HAMP domain SDE12394_RS05185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SDE12394_RS05190 PF07883 Cupin domain SDE12394_RS05195 PF02388 FemAB family SDE12394_RS05200 PF00589 Phage integrase family SDE12394_RS05200 PF13495 Phage integrase, N-terminal SAM-like domain SDE12394_RS05205 PF07009 Protein of unknown function (DUF1312) SDE12394_RS05210 PF01040 UbiA prenyltransferase family SDE12394_RS05215 PF02424 ApbE family SDE12394_RS05220 PF04205 FMN-binding domain SDE12394_RS05225 PF00348 Polyprenyl synthetase SDE12394_RS05230 PF07992 Pyridine nucleotide-disulphide oxidoreductase SDE12394_RS05235 PF07456 SDE12394_RS05235 SDE12394_RS05240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SDE12394_RS05245 PF00072 Response regulator receiver domain SDE12394_RS05245 PF00486 Transcriptional regulatory protein, C terminal SDE12394_RS05255 PF00005 ABC transporter SDE12394_RS05260 PF03572 Peptidase family S41 SDE12394_RS05270 PF08218 Citrate lyase ligase C-terminal domain SDE12394_RS05275 PF00682 HMGL-like SDE12394_RS05275 PF02436 Conserved carboxylase domain SDE12394_RS05280 PF01548 SDE12394_RS05280 SDE12394_RS05280 PF02371 SDE12394_RS05280 SDE12394_RS05285 PF03802 SDE12394_RS05285 SDE12394_RS05290 PF04223 Citrate lyase, alpha subunit (CitF) SDE12394_RS05295 PF03328 HpcH/HpaI aldolase/citrate lyase family SDE12394_RS05300 PF06857 SDE12394_RS05300 SDE12394_RS05310 PF03977 SDE12394_RS05310 SDE12394_RS05315 PF00364 Biotin-requiring enzyme SDE12394_RS05325 PF03600 Citrate transporter SDE12394_RS05330 PF00392 Bacterial regulatory proteins, gntR family SDE12394_RS05330 PF07729 FCD domain SDE12394_RS05335 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase SDE12394_RS05340 PF05145 SDE12394_RS05340 SDE12394_RS05345 PF03977 SDE12394_RS05345 SDE12394_RS05350 PF00364 Biotin-requiring enzyme SDE12394_RS05360 PF00682 HMGL-like SDE12394_RS05360 PF02436 Conserved carboxylase domain SDE12394_RS05365 PF01134 Glucose inhibited division protein A SDE12394_RS05370 PF11750 SDE12394_RS05370 SDE12394_RS05375 PF16264 SDE12394_RS05375 SDE12394_RS05385 PF13303 SDE12394_RS05385 SDE12394_RS05390 PF13612 SDE12394_RS05390 SDE12394_RS05395 PF03466 LysR substrate binding domain SDE12394_RS05400 PF01131 DNA topoisomerase SDE12394_RS05400 PF01396 SDE12394_RS05400 SDE12394_RS05400 PF01751 Toprim domain SDE12394_RS05405 PF02481 DNA recombination-mediator protein A SDE12394_RS05410 PF01351 Ribonuclease HII SDE12394_RS05415 PF01926 50S ribosome-binding GTPase SDE12394_RS05420 PF07690 Major Facilitator Superfamily SDE12394_RS05425 PF00069 Protein kinase domain SDE12394_RS05425 PF05147 Lanthionine synthetase C-like protein SDE12394_RS05435 PF01527 Transposase SDE12394_RS05440 PF00665 Integrase core domain SDE12394_RS05440 PF13276 SDE12394_RS05440 SDE12394_RS05445 PF12844 Helix-turn-helix domain SDE12394_RS05450 PF08876 SDE12394_RS05450 SDE12394_RS05455 PF03006 SDE12394_RS05455 SDE12394_RS05460 PF00781 Diacylglycerol kinase catalytic domain SDE12394_RS05470 PF05532 CsbD-like SDE12394_RS05475 PF00005 ABC transporter SDE12394_RS05475 PF12848 ABC transporter SDE12394_RS05480 PF02821 Staphylokinase/Streptokinase family SDE12394_RS05485 PF07155 ECF-type riboflavin transporter, S component SDE12394_RS05490 PF08543 Phosphomethylpyrimidine kinase SDE12394_RS05495 PF00155 Aminotransferase class I and II SDE12394_RS05495 PF00392 Bacterial regulatory proteins, gntR family SDE12394_RS05500 PF03477 ATP cone domain SDE12394_RS05505 PF01118 Semialdehyde dehydrogenase, NAD binding domain SDE12394_RS05505 PF02774 Semialdehyde dehydrogenase, dimerisation domain SDE12394_RS05510 PF13091 PLD-like domain SDE12394_RS05515 PF00746 SDE12394_RS05515 SDE12394_RS05520 PF00665 Integrase core domain SDE12394_RS05520 PF13276 SDE12394_RS05520 SDE12394_RS05525 PF01527 Transposase SDE12394_RS05530 PF00665 Integrase core domain SDE12394_RS05530 PF13276 SDE12394_RS05530 SDE12394_RS05535 PF01527 Transposase SDE12394_RS05545 PF01268 Formate--tetrahydrofolate ligase SDE12394_RS05560 PF01661 Macro domain SDE12394_RS05565 PF01597 Glycine cleavage H-protein SDE12394_RS05570 PF00724 NADH:flavin oxidoreductase / NADH oxidase family SDE12394_RS05575 PF03099 Biotin/lipoate A/B protein ligase family SDE12394_RS05580 PF04127 DNA / pantothenate metabolism flavoprotein SDE12394_RS05585 PF02441 Flavoprotein SDE12394_RS05590 PF12822 Protein of unknown function (DUF3816) SDE12394_RS05595 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain SDE12394_RS05595 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I SDE12394_RS05595 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II SDE12394_RS05595 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III SDE12394_RS05600 PF02653 SDE12394_RS05600 SDE12394_RS05605 PF02653 SDE12394_RS05605 SDE12394_RS05610 PF00005 ABC transporter SDE12394_RS05615 PF02608 Basic membrane protein SDE12394_RS05620 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region SDE12394_RS05625 PF01791 DeoC/LacD family aldolase SDE12394_RS05630 PF00591 Glycosyl transferase family, a/b domain SDE12394_RS05630 PF02885 Glycosyl transferase family, helical bundle domain SDE12394_RS05630 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain SDE12394_RS05635 PF05175 Methyltransferase small domain SDE12394_RS05640 PF00485 Phosphoribulokinase / Uridine kinase family SDE12394_RS05645 PF01649 Ribosomal protein S20 SDE12394_RS05650 PF00512 His Kinase A (phospho-acceptor) domain SDE12394_RS05650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SDE12394_RS05655 PF00072 Response regulator receiver domain SDE12394_RS05655 PF00486 Transcriptional regulatory protein, C terminal SDE12394_RS05660 PF01433 Peptidase family M1 SDE12394_RS05660 PF11838 ERAP1-like C-terminal domain SDE12394_RS05665 PF01895 PhoU domain SDE12394_RS05670 PF00005 ABC transporter SDE12394_RS05675 PF00005 ABC transporter SDE12394_RS05680 PF00528 Binding-protein-dependent transport system inner membrane component SDE12394_RS05685 PF00528 Binding-protein-dependent transport system inner membrane component SDE12394_RS05690 PF12849 PBP superfamily domain SDE12394_RS05695 PF01189 NOL1/NOP2/sun family SDE12394_RS05695 PF13636 pre-rRNA processing and ribosome biogenesis SDE12394_RS05695 PF17125 SDE12394_RS05695 SDE12394_RS05695 PF17126 SDE12394_RS05695 SDE12394_RS05700 PF00459 Inositol monophosphatase family SDE12394_RS05705 PF05256 Uncharacterised protein family (UPF0223) SDE12394_RS05710 PF03960 ArsC family SDE12394_RS05715 PF01687 Riboflavin kinase SDE12394_RS05715 PF06574 FAD synthetase SDE12394_RS05720 PF01509 TruB family pseudouridylate synthase (N terminal domain) SDE12394_RS05720 PF16198 SDE12394_RS05720 SDE12394_RS05725 PF09903 SDE12394_RS05725 SDE12394_RS05730 PF06081 SDE12394_RS05730 SDE12394_RS05730 PF11728 DUF939 C-terminal domain SDE12394_RS05740 PF02687 SDE12394_RS05740 SDE12394_RS05745 PF00005 ABC transporter SDE12394_RS05750 PF00440 Bacterial regulatory proteins, tetR family SDE12394_RS05755 PF00392 Bacterial regulatory proteins, gntR family SDE12394_RS05755 PF02080 TrkA-C domain SDE12394_RS05760 PF03780 SDE12394_RS05760 SDE12394_RS05765 PF05532 CsbD-like SDE12394_RS05770 PF03780 SDE12394_RS05770 SDE12394_RS05775 PF10031 SDE12394_RS05775 SDE12394_RS05785 PF04226 SDE12394_RS05785 SDE12394_RS05790 PF00580 UvrD/REP helicase N-terminal domain SDE12394_RS05790 PF13361 UvrD-like helicase C-terminal domain SDE12394_RS05795 PF01235 SDE12394_RS05795 SDE12394_RS05800 PF01545 Cation efflux family SDE12394_RS05800 PF16916 SDE12394_RS05800 SDE12394_RS05805 PF05598 SDE12394_RS05805 SDE12394_RS05805 PF13751 SDE12394_RS05805 SDE12394_RS05810 PF00497 Bacterial extracellular solute-binding proteins, family 3 SDE12394_RS05815 PF00005 ABC transporter SDE12394_RS05820 PF00528 Binding-protein-dependent transport system inner membrane component SDE12394_RS05825 PF03831 PhnA protein SDE12394_RS05825 PF08274 PhnA Zinc-Ribbon SDE12394_RS05830 PF01380 SIS domain SDE12394_RS05830 PF13522 Glutamine amidotransferase domain SDE12394_RS05835 PF00717 Peptidase S24-like SDE12394_RS05840 PF00224 Pyruvate kinase, barrel domain SDE12394_RS05840 PF02887 Pyruvate kinase, alpha/beta domain SDE12394_RS05845 PF00365 Phosphofructokinase SDE12394_RS05850 PF01336 OB-fold nucleic acid binding domain SDE12394_RS05850 PF02811 PHP domain SDE12394_RS05850 PF07733 Bacterial DNA polymerase III alpha subunit SDE12394_RS05850 PF14579 Helix-hairpin-helix motif SDE12394_RS05855 PF00392 Bacterial regulatory proteins, gntR family SDE12394_RS05860 PF00005 ABC transporter SDE12394_RS05870 PF09335 SDE12394_RS05870 SDE12394_RS05880 PF05598 SDE12394_RS05880 SDE12394_RS05880 PF13751 SDE12394_RS05880 SDE12394_RS05890 PF00575 S1 RNA binding domain SDE12394_RS05905 PF11184 SDE12394_RS05905 SDE12394_RS05910 PF01063 Aminotransferase class IV SDE12394_RS05915 PF00521 DNA gyrase/topoisomerase IV, subunit A SDE12394_RS05915 PF03989 DNA gyrase C-terminal domain, beta-propeller SDE12394_RS05925 PF00204 DNA gyrase B SDE12394_RS05925 PF00986 DNA gyrase B subunit, carboxyl terminus SDE12394_RS05925 PF01751 Toprim domain SDE12394_RS05925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SDE12394_RS05930 PF02660 SDE12394_RS05930 SDE12394_RS05935 PF01979 Amidohydrolase family SDE12394_RS05945 PF00528 Binding-protein-dependent transport system inner membrane component SDE12394_RS05950 PF00497 Bacterial extracellular solute-binding proteins, family 3 SDE12394_RS05955 PF01425 Amidase SDE12394_RS05960 PF00665 Integrase core domain SDE12394_RS05965 PF13673 Acetyltransferase (GNAT) domain SDE12394_RS05970 PF00156 Phosphoribosyl transferase domain SDE12394_RS05975 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family SDE12394_RS05985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SDE12394_RS05985 PF03466 LysR substrate binding domain SDE12394_RS05995 PF01048 Phosphorylase superfamily SDE12394_RS06000 PF01048 Phosphorylase superfamily SDE12394_RS06005 PF03960 ArsC family SDE12394_RS06010 PF01676 Metalloenzyme superfamily SDE12394_RS06015 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) SDE12394_RS06020 PF01926 50S ribosome-binding GTPase SDE12394_RS06020 PF10396 GTP-binding protein TrmE N-terminus SDE12394_RS06020 PF12631 Catalytic cysteine-containing C-terminus of GTPase, MnmE SDE12394_RS06025 PF05598 SDE12394_RS06025 SDE12394_RS06025 PF13751 SDE12394_RS06025 SDE12394_RS06030 PF01546 Peptidase family M20/M25/M40 SDE12394_RS06035 PF00881 Nitroreductase family SDE12394_RS06040 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SDE12394_RS06045 PF00205 Thiamine pyrophosphate enzyme, central domain SDE12394_RS06045 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SDE12394_RS06050 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SDE12394_RS06055 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SDE12394_RS06060 PF01541 GIY-YIG catalytic domain SDE12394_RS06060 PF02151 UvrB/uvrC motif SDE12394_RS06060 PF08459 UvrC Helix-hairpin-helix N-terminal SDE12394_RS06070 PF00171 Aldehyde dehydrogenase family SDE12394_RS06075 PF13419 Haloacid dehalogenase-like hydrolase SDE12394_RS06080 PF07510 SDE12394_RS06080 SDE12394_RS06085 PF00132 Bacterial transferase hexapeptide (six repeats) SDE12394_RS06085 PF12464 Maltose acetyltransferase SDE12394_RS06085 PF14602 Hexapeptide repeat of succinyl-transferase SDE12394_RS06090 PF13419 Haloacid dehalogenase-like hydrolase SDE12394_RS06095 PF03692 SDE12394_RS06095 SDE12394_RS06100 PF13343 Bacterial extracellular solute-binding protein SDE12394_RS06105 PF00072 Response regulator receiver domain SDE12394_RS06105 PF12833 Helix-turn-helix domain SDE12394_RS06110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SDE12394_RS06110 PF06580 SDE12394_RS06110 SDE12394_RS06115 PF03613 SDE12394_RS06115 SDE12394_RS06120 PF03609 SDE12394_RS06120 SDE12394_RS06125 PF03830 PTS system sorbose subfamily IIB component SDE12394_RS06130 PF03610 PTS system fructose IIA component SDE12394_RS06135 PF03601 SDE12394_RS06135 SDE12394_RS06140 PF11187 Protein of unknown function (DUF2974) SDE12394_RS06145 PF08951 Enterocin A Immunity SDE12394_RS06150 PF01721 Class II bacteriocin SDE12394_RS06160 PF01641 SelR domain SDE12394_RS06165 PF00009 Elongation factor Tu GTP binding domain SDE12394_RS06165 PF00679 Elongation factor G C-terminus SDE12394_RS06165 PF03144 Elongation factor Tu domain 2 SDE12394_RS06165 PF06421 GTP-binding protein LepA C-terminus SDE12394_RS06165 PF14492 Elongation Factor G, domain II SDE12394_RS06170 PF00334 Nucleoside diphosphate kinase SDE12394_RS06175 PF09711 CRISPR-associated protein (Cas_Csn2) SDE12394_RS06180 PF09827 CRISPR associated protein Cas2 SDE12394_RS06185 PF01867 CRISPR associated protein Cas1 SDE12394_RS06190 PF13395 HNH endonuclease SDE12394_RS06190 PF16592 SDE12394_RS06190 SDE12394_RS06190 PF16593 SDE12394_RS06190 SDE12394_RS06190 PF16595 SDE12394_RS06190 SDE12394_RS06195 PF07314 SDE12394_RS06195 SDE12394_RS06205 PF01643 Acyl-ACP thioesterase SDE12394_RS06210 PF04055 Radical SAM superfamily SDE12394_RS06210 PF06969 HemN C-terminal domain SDE12394_RS06225 PF07949 YbbR-like protein SDE12394_RS06230 PF02457 DisA bacterial checkpoint controller nucleotide-binding SDE12394_RS06235 PF08245 Mur ligase middle domain SDE12394_RS06235 PF08353 SDE12394_RS06235 SDE12394_RS06245 PF03099 Biotin/lipoate A/B protein ligase family SDE12394_RS06245 PF10437 Bacterial lipoate protein ligase C-terminus SDE12394_RS06250 PF13349 SDE12394_RS06250 SDE12394_RS06255 PF03551 Transcriptional regulator PadR-like family SDE12394_RS06260 PF00364 Biotin-requiring enzyme SDE12394_RS06260 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SDE12394_RS06260 PF07992 Pyridine nucleotide-disulphide oxidoreductase SDE12394_RS06270 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) SDE12394_RS06270 PF00364 Biotin-requiring enzyme SDE12394_RS06270 PF02817 e3 binding domain SDE12394_RS06275 PF02779 Transketolase, pyrimidine binding domain SDE12394_RS06275 PF02780 Transketolase, C-terminal domain SDE12394_RS06280 PF00676 Dehydrogenase E1 component SDE12394_RS06285 PF00005 ABC transporter SDE12394_RS06285 PF12848 ABC transporter SDE12394_RS06295 PF00756 Putative esterase SDE12394_RS06300 PF00753 Metallo-beta-lactamase superfamily SDE12394_RS06300 PF07521 RNA-metabolising metallo-beta-lactamase SDE12394_RS06305 PF00005 ABC transporter SDE12394_RS06310 PF02653 SDE12394_RS06310 SDE12394_RS06315 PF04392 ABC transporter substrate binding protein SDE12394_RS06320 PF06782 SDE12394_RS06320 SDE12394_RS06335 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) SDE12394_RS06345 PF01527 Transposase SDE12394_RS06365 PF05670 SDE12394_RS06365 SDE12394_RS06365 PF05833 Fibronectin-binding protein A N-terminus (FbpA) SDE12394_RS06370 PF12895 Anaphase-promoting complex, cyclosome, subunit 3 SDE12394_RS06375 PF01594 SDE12394_RS06375 SDE12394_RS06380 PF00293 NUDIX domain SDE12394_RS06395 PF16363 SDE12394_RS06395 SDE12394_RS06400 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase SDE12394_RS06405 PF00483 Nucleotidyl transferase SDE12394_RS06410 PF01266 FAD dependent oxidoreductase SDE12394_RS06415 PF02535 SDE12394_RS06415 SDE12394_RS06420 PF01784 NIF3 (NGG1p interacting factor 3) SDE12394_RS06425 PF04816 Family of unknown function (DUF633) SDE12394_RS06430 PF00633 Helix-hairpin-helix motif SDE12394_RS06430 PF00730 HhH-GPD superfamily base excision DNA repair protein SDE12394_RS06430 PF10576 Iron-sulfur binding domain of endonuclease III SDE12394_RS06435 PF07261 Replication initiation and membrane attachment SDE12394_RS06440 PF00156 Phosphoribosyl transferase domain SDE12394_RS06445 PF01368 DHH family SDE12394_RS06445 PF02272 DHHA1 domain SDE12394_RS06445 PF10141 SDE12394_RS06445 SDE12394_RS06450 PF00106 short chain dehydrogenase SDE12394_RS06455 PF00753 Metallo-beta-lactamase superfamily SDE12394_RS06455 PF12706 Beta-lactamase superfamily domain SDE12394_RS06465 PF01926 50S ribosome-binding GTPase SDE12394_RS06465 PF13167 SDE12394_RS06465 SDE12394_RS06465 PF16360 SDE12394_RS06465 SDE12394_RS06470 PF01715 IPP transferase SDE12394_RS06475 PF03595 Voltage-dependent anion channel SDE12394_RS06480 PF02798 Glutathione S-transferase, N-terminal domain SDE12394_RS06480 PF14497 Glutathione S-transferase, C-terminal domain SDE12394_RS06485 PF00485 Phosphoribulokinase / Uridine kinase family SDE12394_RS06490 PF00581 Rhodanese-like domain SDE12394_RS06490 PF12368 SDE12394_RS06490 SDE12394_RS06500 PF03358 NADPH-dependent FMN reductase SDE12394_RS06505 PF00343 Carbohydrate phosphorylase SDE12394_RS06510 PF02446 4-alpha-glucanotransferase SDE12394_RS06520 PF00665 Integrase core domain SDE12394_RS06520 PF13936 Helix-turn-helix domain SDE12394_RS06525 PF13416 Bacterial extracellular solute-binding protein SDE12394_RS06530 PF00528 Binding-protein-dependent transport system inner membrane component SDE12394_RS06535 PF00528 Binding-protein-dependent transport system inner membrane component SDE12394_RS06540 PF00356 Bacterial regulatory proteins, lacI family SDE12394_RS06550 PF00528 Binding-protein-dependent transport system inner membrane component SDE12394_RS06560 PF00128 Alpha amylase, catalytic domain SDE12394_RS06560 PF02903 Alpha amylase, N-terminal ig-like domain SDE12394_RS06565 PF13416 Bacterial extracellular solute-binding protein SDE12394_RS06575 PF00550 Phosphopantetheine attachment site SDE12394_RS06580 PF03062 SDE12394_RS06580 SDE12394_RS06585 PF00501 AMP-binding enzyme SDE12394_RS06585 PF13193 AMP-binding enzyme C-terminal domain SDE12394_RS06590 PF00271 Helicase conserved C-terminal domain SDE12394_RS06590 PF02151 UvrB/uvrC motif SDE12394_RS06590 PF04851 Type III restriction enzyme, res subunit SDE12394_RS06590 PF12344 Ultra-violet resistance protein B SDE12394_RS06595 PF00497 Bacterial extracellular solute-binding proteins, family 3 SDE12394_RS06595 PF00528 Binding-protein-dependent transport system inner membrane component SDE12394_RS06600 PF00005 ABC transporter SDE12394_RS06605 PF02378 Phosphotransferase system, EIIC SDE12394_RS06610 PF11687 SDE12394_RS06610 SDE12394_RS06615 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit SDE12394_RS06620 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SDE12394_RS06625 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SDE12394_RS06625 PF00874 PRD domain SDE12394_RS06625 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SDE12394_RS06625 PF05043 Mga helix-turn-helix domain SDE12394_RS06625 PF08279 HTH domain SDE12394_RS06630 PF05913 Bacterial protein of unknown function (DUF871) SDE12394_RS06635 PF00232 Glycosyl hydrolase family 1 SDE12394_RS06640 PF04973 SDE12394_RS06640 SDE12394_RS06650 PF01018 GTP1/OBG SDE12394_RS06650 PF01926 50S ribosome-binding GTPase SDE12394_RS06650 PF09269 Domain of unknown function (DUF1967) SDE12394_RS06655 PF02073 Thermophilic metalloprotease (M29) SDE12394_RS06660 PF01544 CorA-like Mg2+ transporter protein SDE12394_RS06670 PF03061 Thioesterase superfamily SDE12394_RS06675 PF07690 Major Facilitator Superfamily SDE12394_RS06680 PF08903 Domain of unknown function (DUF1846) SDE12394_RS06685 PF03649 SDE12394_RS06685 SDE12394_RS06690 PF00005 ABC transporter SDE12394_RS06695 PF03061 Thioesterase superfamily SDE12394_RS06705 PF03180 NLPA lipoprotein SDE12394_RS06715 PF01527 Transposase SDE12394_RS06720 PF01527 Transposase SDE12394_RS06725 PF00665 Integrase core domain SDE12394_RS06725 PF13276 SDE12394_RS06725 SDE12394_RS06730 PF00145 C-5 cytosine-specific DNA methylase SDE12394_RS06735 PF06970 Replication initiator protein A (RepA) N-terminus SDE12394_RS06740 PF00239 Resolvase, N terminal domain SDE12394_RS06740 PF07508 Recombinase SDE12394_RS06740 PF13408 Recombinase zinc beta ribbon domain SDE12394_RS06755 PF01554 MatE SDE12394_RS06760 PF00005 ABC transporter SDE12394_RS06770 PF09605 SDE12394_RS06770 SDE12394_RS06780 PF00005 ABC transporter SDE12394_RS06780 PF00664 ABC transporter transmembrane region SDE12394_RS06790 PF05713 SDE12394_RS06790 SDE12394_RS06795 PF03432 SDE12394_RS06795 SDE12394_RS06805 PF08878 SDE12394_RS06805 SDE12394_RS06815 PF13443 Cro/C1-type HTH DNA-binding domain SDE12394_RS06830 PF04326 Divergent AAA domain SDE12394_RS06830 PF13749 ATP-dependent DNA helicase recG C-terminal SDE12394_RS06835 PF01131 DNA topoisomerase SDE12394_RS06835 PF01751 Toprim domain SDE12394_RS06855 PF12846 AAA-like domain SDE12394_RS06860 PF12666 SDE12394_RS06860 SDE12394_RS06875 PF12750 SDE12394_RS06875 SDE12394_RS06885 PF02534 Type IV secretory system Conjugative DNA transfer SDE12394_RS06890 PF12687 SDE12394_RS06890 SDE12394_RS06905 PF01938 TRAM domain SDE12394_RS06905 PF05958 tRNA (Uracil-5-)-methyltransferase SDE12394_RS06910 PF03816 Cell envelope-related transcriptional attenuator domain SDE12394_RS06915 PF01202 Shikimate kinase SDE12394_RS06920 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) SDE12394_RS06925 PF03631 SDE12394_RS06925 SDE12394_RS06930 PF00557 Metallopeptidase family M24 SDE12394_RS06935 PF00392 Bacterial regulatory proteins, gntR family SDE12394_RS06935 PF00571 CBS domain SDE12394_RS06935 PF03061 Thioesterase superfamily SDE12394_RS06935 PF07085 DRTGG domain SDE12394_RS06940 PF13302 Acetyltransferase (GNAT) domain SDE12394_RS06945 PF00746 SDE12394_RS06945 SDE12394_RS06945 PF01378 B domain SDE12394_RS06950 PF00933 Glycosyl hydrolase family 3 N terminal domain SDE12394_RS06955 PF13419 Haloacid dehalogenase-like hydrolase SDE12394_RS06960 PF00106 short chain dehydrogenase SDE12394_RS06965 PF03786 D-mannonate dehydratase (UxuA) SDE12394_RS06970 PF02614 Glucuronate isomerase SDE12394_RS06975 PF01081 KDPG and KHG aldolase SDE12394_RS06980 PF00392 Bacterial regulatory proteins, gntR family SDE12394_RS06980 PF07729 FCD domain SDE12394_RS06985 PF00703 Glycosyl hydrolases family 2 SDE12394_RS06985 PF02836 Glycosyl hydrolases family 2, TIM barrel domain SDE12394_RS06985 PF02837 Glycosyl hydrolases family 2, sugar binding domain SDE12394_RS06990 PF00294 pfkB family carbohydrate kinase SDE12394_RS06995 PF13347 MFS/sugar transport protein SDE12394_RS07000 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) SDE12394_RS07005 PF00438 S-adenosylmethionine synthetase, N-terminal domain SDE12394_RS07005 PF02772 S-adenosylmethionine synthetase, central domain SDE12394_RS07005 PF02773 S-adenosylmethionine synthetase, C-terminal domain SDE12394_RS07010 PF04270 Streptococcal histidine triad protein SDE12394_RS07010 PF12799 Leucine Rich repeats (2 copies) SDE12394_RS07015 PF02237 Biotin protein ligase C terminal domain SDE12394_RS07015 PF03099 Biotin/lipoate A/B protein ligase family SDE12394_RS07015 PF08279 HTH domain SDE12394_RS07020 PF12169 DNA polymerase III subunits gamma and tau domain III SDE12394_RS07020 PF13177 DNA polymerase III, delta subunit SDE12394_RS07025 PF13185 GAF domain SDE12394_RS07030 PF13367 SDE12394_RS07030 SDE12394_RS07035 PF06961 SDE12394_RS07035 SDE12394_RS07040 PF00485 Phosphoribulokinase / Uridine kinase family SDE12394_RS07045 PF00270 DEAD/DEAH box helicase SDE12394_RS07045 PF00271 Helicase conserved C-terminal domain SDE12394_RS07050 PF01522 Polysaccharide deacetylase SDE12394_RS07055 PF00171 Aldehyde dehydrogenase family SDE12394_RS07060 PF00391 PEP-utilising enzyme, mobile domain SDE12394_RS07060 PF02896 PEP-utilising enzyme, TIM barrel domain SDE12394_RS07060 PF05524 PEP-utilising enzyme, N-terminal SDE12394_RS07065 PF00381 PTS HPr component phosphorylation site SDE12394_RS07070 PF00462 Glutaredoxin SDE12394_RS07075 PF00317 Ribonucleotide reductase, all-alpha domain SDE12394_RS07075 PF02867 Ribonucleotide reductase, barrel domain SDE12394_RS07075 PF08343 Ribonucleotide reductase N-terminal SDE12394_RS07080 PF00268 Ribonucleotide reductase, small chain SDE12394_RS07085 PF00654 Voltage gated chloride channel SDE12394_RS07090 PF02517 CAAX protease self-immunity SDE12394_RS07095 PF11368 SDE12394_RS07095 SDE12394_RS07100 PF01381 Helix-turn-helix SDE12394_RS07105 PF11667 SDE12394_RS07105 SDE12394_RS07110 PF01411 tRNA synthetases class II (A) SDE12394_RS07110 PF02272 DHHA1 domain SDE12394_RS07110 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain SDE12394_RS07115 PF04525 Tubby C 2 SDE12394_RS07120 PF13145 PPIC-type PPIASE domain SDE12394_RS07125 PF01596 O-methyltransferase SDE12394_RS07130 PF07690 Major Facilitator Superfamily SDE12394_RS07135 PF13419 Haloacid dehalogenase-like hydrolase SDE12394_RS07140 PF13302 Acetyltransferase (GNAT) domain SDE12394_RS07145 PF03358 NADPH-dependent FMN reductase SDE12394_RS07150 PF01432 Peptidase family M3 SDE12394_RS07150 PF08439 Oligopeptidase F SDE12394_RS07155 PF06054 SDE12394_RS07155 SDE12394_RS07160 PF07690 Major Facilitator Superfamily SDE12394_RS07170 PF00849 RNA pseudouridylate synthase SDE12394_RS07170 PF01479 S4 domain SDE12394_RS07175 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase SDE12394_RS07180 PF02547 Queuosine biosynthesis protein SDE12394_RS07185 PF11311 SDE12394_RS07185 SDE12394_RS07190 PF13354 Beta-lactamase enzyme family SDE12394_RS07195 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain SDE12394_RS07195 PF02777 Iron/manganese superoxide dismutases, C-terminal domain SDE12394_RS07200 PF06144 DNA polymerase III, delta subunit SDE12394_RS07205 PF00753 Metallo-beta-lactamase superfamily SDE12394_RS07205 PF03772 SDE12394_RS07205 SDE12394_RS07210 PF10531 SLBB domain SDE12394_RS07210 PF12836 Helix-hairpin-helix motif SDE12394_RS07215 PF01553 Acyltransferase SDE12394_RS07220 PF05175 Methyltransferase small domain SDE12394_RS07225 PF01541 GIY-YIG catalytic domain SDE12394_RS07230 PF02705 SDE12394_RS07230 SDE12394_RS07235 PF00270 DEAD/DEAH box helicase SDE12394_RS07235 PF00271 Helicase conserved C-terminal domain SDE12394_RS07240 PF03180 NLPA lipoprotein SDE12394_RS07245 PF00528 Binding-protein-dependent transport system inner membrane component SDE12394_RS07250 PF00005 ABC transporter SDE12394_RS07255 PF08000 Bacterial PH domain SDE12394_RS07260 PF00009 Elongation factor Tu GTP binding domain SDE12394_RS07260 PF03144 Elongation factor Tu domain 2 SDE12394_RS07260 PF16658 SDE12394_RS07260 SDE12394_RS07265 PF09529 SDE12394_RS07265 SDE12394_RS07270 PF01225 Mur ligase family, catalytic domain SDE12394_RS07270 PF02875 Mur ligase family, glutamate ligase domain SDE12394_RS07270 PF08245 Mur ligase middle domain SDE12394_RS07275 PF01820 D-ala D-ala ligase N-terminus SDE12394_RS07275 PF07478 D-ala D-ala ligase C-terminus SDE12394_RS07280 PF02132 RecR protein SDE12394_RS07280 PF13662 Toprim domain SDE12394_RS07285 PF00905 Penicillin binding protein transpeptidase domain SDE12394_RS07285 PF03717 Penicillin-binding Protein dimerisation domain SDE12394_RS07290 PF01226 Formate/nitrite transporter SDE12394_RS07300 PF02829 3H domain SDE12394_RS07300 PF08279 HTH domain SDE12394_RS07305 PF00300 Histidine phosphatase superfamily (branch 1) SDE12394_RS07315 PF00122 E1-E2 ATPase SDE12394_RS07315 PF00702 haloacid dehalogenase-like hydrolase SDE12394_RS07320 PF12844 Helix-turn-helix domain SDE12394_RS07330 PF00216 Bacterial DNA-binding protein SDE12394_RS07335 PF09911 SDE12394_RS07335 SDE12394_RS07340 PF13472 GDSL-like Lipase/Acylhydrolase family SDE12394_RS07345 PF02645 Uncharacterised protein, DegV family COG1307 SDE12394_RS07350 PF13936 Helix-turn-helix domain SDE12394_RS07360 PF02463 RecF/RecN/SMC N terminal domain SDE12394_RS07365 PF01316 Arginine repressor, DNA binding domain SDE12394_RS07365 PF02863 Arginine repressor, C-terminal domain SDE12394_RS07370 PF01479 S4 domain SDE12394_RS07370 PF01728 FtsJ-like methyltransferase SDE12394_RS07375 PF00348 Polyprenyl synthetase SDE12394_RS07380 PF02609 Exonuclease VII small subunit SDE12394_RS07385 PF02601 SDE12394_RS07385 SDE12394_RS07385 PF13742 SDE12394_RS07385 SDE12394_RS07390 PF01256 Carbohydrate kinase SDE12394_RS07395 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain SDE12394_RS07395 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain SDE12394_RS07400 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain SDE12394_RS07400 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I SDE12394_RS07400 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II SDE12394_RS07400 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III SDE12394_RS07405 PF00875 DNA photolyase SDE12394_RS07405 PF03441 FAD binding domain of DNA photolyase SDE12394_RS07415 PF02421 Ferrous iron transport protein B SDE12394_RS07415 PF07664 SDE12394_RS07415 SDE12394_RS07415 PF07670 Nucleoside recognition SDE12394_RS07420 PF04023 FeoA domain SDE12394_RS07425 PF00005 ABC transporter SDE12394_RS07430 PF00528 Binding-protein-dependent transport system inner membrane component SDE12394_RS07435 PF08796 Protein of unknown function (DUF1797) SDE12394_RS07440 PF00004 ATPase family associated with various cellular activities (AAA) SDE12394_RS07440 PF02151 UvrB/uvrC motif SDE12394_RS07440 PF07724 AAA domain (Cdc48 subfamily) SDE12394_RS07440 PF10431 C-terminal, D2-small domain, of ClpB protein SDE12394_RS07445 PF00293 NUDIX domain SDE12394_RS07450 PF08860 Domain of unknown function (DUF1827) SDE12394_RS07455 PF00133 tRNA synthetases class I (I, L, M and V) SDE12394_RS07455 PF08264 Anticodon-binding domain of tRNA SDE12394_RS07460 PF05103 DivIVA protein SDE12394_RS07470 PF02325 SDE12394_RS07470 SDE12394_RS07475 PF04472 Protein of unknown function (DUF552) SDE12394_RS07480 PF01168 Alanine racemase, N-terminal domain SDE12394_RS07485 PF00091 Tubulin/FtsZ family, GTPase domain SDE12394_RS07485 PF12327 FtsZ family, C-terminal domain SDE12394_RS07490 PF02491 SHS2 domain inserted in FTSA SDE12394_RS07490 PF11983 SDE12394_RS07490 SDE12394_RS07490 PF14450 Cell division protein FtsA SDE12394_RS07500 PF03033 Glycosyltransferase family 28 N-terminal domain SDE12394_RS07500 PF04101 Glycosyltransferase family 28 C-terminal domain SDE12394_RS07505 PF02875 Mur ligase family, glutamate ligase domain SDE12394_RS07505 PF08245 Mur ligase middle domain SDE12394_RS07510 PF01841 Transglutaminase-like superfamily SDE12394_RS07515 PF01527 Transposase SDE12394_RS07520 PF00665 Integrase core domain SDE12394_RS07520 PF13276 SDE12394_RS07520 SDE12394_RS07525 PF11364 SDE12394_RS07525 SDE12394_RS07530 PF00009 Elongation factor Tu GTP binding domain SDE12394_RS07530 PF00679 Elongation factor G C-terminus SDE12394_RS07530 PF03144 Elongation factor Tu domain 2 SDE12394_RS07535 PF00581 Rhodanese-like domain SDE12394_RS07540 PF00480 ROK family SDE12394_RS07545 PF06014 Bacterial protein of unknown function (DUF910) SDE12394_RS07560 PF00005 ABC transporter SDE12394_RS07560 PF00664 ABC transporter transmembrane region SDE12394_RS07565 PF00005 ABC transporter SDE12394_RS07565 PF00664 ABC transporter transmembrane region SDE12394_RS07570 PF04892 SDE12394_RS07570 SDE12394_RS07575 PF04055 Radical SAM superfamily SDE12394_RS07575 PF13394 4Fe-4S single cluster domain SDE12394_RS07580 PF06265 Protein of unknown function (DUF1027) SDE12394_RS07585 PF05368 NmrA-like family SDE12394_RS07590 PF01548 SDE12394_RS07590 SDE12394_RS07590 PF02371 SDE12394_RS07590 SDE12394_RS07595 PF00005 ABC transporter SDE12394_RS07600 PF00005 ABC transporter SDE12394_RS07605 PF05025 RbsD / FucU transport protein family SDE12394_RS07610 PF00294 pfkB family carbohydrate kinase SDE12394_RS07615 PF00356 Bacterial regulatory proteins, lacI family SDE12394_RS07615 PF13377 Periplasmic binding protein-like domain SDE12394_RS07620 PF05362 Lon protease (S16) C-terminal proteolytic domain SDE12394_RS07620 PF13180 PDZ domain SDE12394_RS07625 PF01467 Cytidylyltransferase SDE12394_RS07630 PF03602 Conserved hypothetical protein 95 SDE12394_RS07635 PF03590 Aspartate-ammonia ligase SDE12394_RS07640 PF00696 Amino acid kinase family SDE12394_RS07645 PF01548 SDE12394_RS07645 SDE12394_RS07645 PF02371 SDE12394_RS07645 SDE12394_RS07650 PF01546 Peptidase family M20/M25/M40 SDE12394_RS07655 PF03606 SDE12394_RS07655 SDE12394_RS07660 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain SDE12394_RS07660 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain SDE12394_RS07665 PF13673 Acetyltransferase (GNAT) domain SDE12394_RS07670 PF02274 Amidinotransferase SDE12394_RS07675 PF00027 Cyclic nucleotide-binding domain SDE12394_RS07675 PF13545 Crp-like helix-turn-helix domain SDE12394_RS07680 PF01316 Arginine repressor, DNA binding domain SDE12394_RS07680 PF02863 Arginine repressor, C-terminal domain SDE12394_RS07685 PF03483 B3/4 domain SDE12394_RS07690 PF04237 YjbR SDE12394_RS07695 PF00672 HAMP domain SDE12394_RS07695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SDE12394_RS07695 PF02743 Cache domain SDE12394_RS07695 PF06580 SDE12394_RS07695 SDE12394_RS07700 PF00072 Response regulator receiver domain SDE12394_RS07700 PF12833 Helix-turn-helix domain SDE12394_RS07705 PF01625 Peptide methionine sulfoxide reductase SDE12394_RS07705 PF01641 SelR domain SDE12394_RS07710 PF00578 AhpC/TSA family SDE12394_RS07715 PF02683 SDE12394_RS07715 SDE12394_RS07720 PF01544 CorA-like Mg2+ transporter protein SDE12394_RS07725 PF01408 Oxidoreductase family, NAD-binding Rossmann fold SDE12394_RS07730 PF09827 CRISPR associated protein Cas2 SDE12394_RS07735 PF01867 CRISPR associated protein Cas1 SDE12394_RS07740 PF01930 Domain of unknown function DUF83 SDE12394_RS07745 PF05107 SDE12394_RS07745 SDE12394_RS07750 PF09709 SDE12394_RS07750 SDE12394_RS07755 PF09704 CRISPR-associated protein (Cas_Cas5) SDE12394_RS07760 PF00271 Helicase conserved C-terminal domain SDE12394_RS07760 PF01966 HD domain SDE12394_RS07760 PF04851 Type III restriction enzyme, res subunit SDE12394_RS07765 PF00133 tRNA synthetases class I (I, L, M and V) SDE12394_RS07765 PF08264 Anticodon-binding domain of tRNA SDE12394_RS07765 PF10458 Valyl tRNA synthetase tRNA binding arm SDE12394_RS07770 PF13238 AAA domain SDE12394_RS07775 PF13302 Acetyltransferase (GNAT) domain SDE12394_RS07780 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SDE12394_RS07785 PF14520 Helix-hairpin-helix domain SDE12394_RS07790 PF08930 Domain of unknown function (DUF1912) SDE12394_RS07795 PF01047 MarR family SDE12394_RS07800 PF01554 MatE SDE12394_RS07810 PF00793 DAHP synthetase I family SDE12394_RS07815 PF01761 3-dehydroquinate synthase SDE12394_RS07840 PF01488 Shikimate / quinate 5-dehydrogenase SDE12394_RS07840 PF08501 Shikimate dehydrogenase substrate binding domain SDE12394_RS07845 PF00703 Glycosyl hydrolases family 2 SDE12394_RS07845 PF02836 Glycosyl hydrolases family 2, TIM barrel domain SDE12394_RS07845 PF02837 Glycosyl hydrolases family 2, sugar binding domain SDE12394_RS07845 PF16355 SDE12394_RS07845 SDE12394_RS07850 PF00072 Response regulator receiver domain SDE12394_RS07850 PF12833 Helix-turn-helix domain SDE12394_RS07855 PF06580 SDE12394_RS07855 SDE12394_RS07865 PF12010 SDE12394_RS07865 SDE12394_RS07865 PF13416 Bacterial extracellular solute-binding protein SDE12394_RS07870 PF00528 Binding-protein-dependent transport system inner membrane component SDE12394_RS07875 PF00528 Binding-protein-dependent transport system inner membrane component SDE12394_RS07880 PF00480 ROK family SDE12394_RS07885 PF07971 Glycosyl hydrolase family 92 SDE12394_RS07895 PF00232 Glycosyl hydrolase family 1 SDE12394_RS07900 PF07555 beta-N-acetylglucosaminidase SDE12394_RS07905 PF00392 Bacterial regulatory proteins, gntR family SDE12394_RS07905 PF13377 Periplasmic binding protein-like domain SDE12394_RS07910 PF06824 Protein of unknown function (DUF1237) SDE12394_RS07915 PF01074 Glycosyl hydrolases family 38 N-terminal domain SDE12394_RS07915 PF07748 Glycosyl hydrolases family 38 C-terminal domain SDE12394_RS07915 PF09261 Alpha mannosidase, middle domain SDE12394_RS07920 PF02195 ParB-like nuclease domain SDE12394_RS07925 PF13420 Acetyltransferase (GNAT) domain SDE12394_RS07930 PF00296 Luciferase-like monooxygenase SDE12394_RS07935 PF00501 AMP-binding enzyme SDE12394_RS07935 PF13193 AMP-binding enzyme C-terminal domain SDE12394_RS07940 PF03060 Nitronate monooxygenase SDE12394_RS07945 PF00108 Thiolase, N-terminal domain SDE12394_RS07945 PF02803 Thiolase, C-terminal domain SDE12394_RS07965 PF01938 TRAM domain SDE12394_RS07965 PF05958 tRNA (Uracil-5-)-methyltransferase SDE12394_RS07970 PF02631 RecX family SDE12394_RS07975 PF04167 Protein of unknown function (DUF402) SDE12394_RS07980 PF06124 Staphylococcal protein of unknown function (DUF960) SDE12394_RS08040 PF00665 Integrase core domain SDE12394_RS08040 PF13936 Helix-turn-helix domain SDE12394_RS08045 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein SDE12394_RS08045 PF16321 SDE12394_RS08045 SDE12394_RS08060 PF01205 Uncharacterized protein family UPF0029 SDE12394_RS08065 PF00291 Pyridoxal-phosphate dependent enzyme SDE12394_RS08070 PF00575 S1 RNA binding domain SDE12394_RS08075 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD SDE12394_RS08075 PF08282 haloacid dehalogenase-like hydrolase SDE12394_RS08080 PF00072 Response regulator receiver domain SDE12394_RS08080 PF00196 Bacterial regulatory proteins, luxR family SDE12394_RS08085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SDE12394_RS08085 PF07730 Histidine kinase SDE12394_RS08090 PF09922 Cell wall-active antibiotics response protein (DUF2154) SDE12394_RS08095 PF00069 Protein kinase domain SDE12394_RS08095 PF03793 PASTA domain SDE12394_RS08100 PF13672 Protein phosphatase 2C SDE12394_RS08105 PF01029 NusB family SDE12394_RS08105 PF01189 NOL1/NOP2/sun family SDE12394_RS08110 PF00551 Formyl transferase SDE12394_RS08110 PF02911 Formyl transferase, C-terminal domain SDE12394_RS08115 PF00271 Helicase conserved C-terminal domain SDE12394_RS08115 PF04851 Type III restriction enzyme, res subunit SDE12394_RS08120 PF01192 RNA polymerase Rpb6 SDE12394_RS08125 PF00625 Guanylate kinase SDE12394_RS08130 PF00013 KH domain SDE12394_RS08130 PF01966 HD domain SDE12394_RS08130 PF12072 SDE12394_RS08130 SDE12394_RS08140 PF00108 Thiolase, N-terminal domain SDE12394_RS08140 PF02803 Thiolase, C-terminal domain SDE12394_RS08145 PF01144 Coenzyme A transferase SDE12394_RS08150 PF01144 Coenzyme A transferase SDE12394_RS08155 PF00106 short chain dehydrogenase SDE12394_RS08165 PF02664 S-Ribosylhomocysteinase (LuxS) SDE12394_RS08175 PF01170 Putative RNA methylase family UPF0020 SDE12394_RS08175 PF02926 THUMP domain SDE12394_RS08180 PF05103 DivIVA protein SDE12394_RS08185 PF06908 Protein of unknown function (DUF1273) SDE12394_RS08190 PF03838 Recombination protein U SDE12394_RS08195 PF00905 Penicillin binding protein transpeptidase domain SDE12394_RS08195 PF00912 Transglycosylase SDE12394_RS08200 PF03051 Peptidase C1-like family SDE12394_RS08205 PF02540 NAD synthase SDE12394_RS08210 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family SDE12394_RS08215 PF00324 Amino acid permease SDE12394_RS08220 PF07992 Pyridine nucleotide-disulphide oxidoreductase SDE12394_RS08225 PF13268 SDE12394_RS08225 SDE12394_RS08230 PF00005 ABC transporter SDE12394_RS08235 PF00528 Binding-protein-dependent transport system inner membrane component SDE12394_RS08240 PF00497 Bacterial extracellular solute-binding proteins, family 3 SDE12394_RS08245 PF00270 DEAD/DEAH box helicase SDE12394_RS08245 PF00271 Helicase conserved C-terminal domain SDE12394_RS08250 PF00953 Glycosyl transferase family 4 SDE12394_RS08250 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 SDE12394_RS08260 PF04977 Septum formation initiator SDE12394_RS08265 PF01795 MraW methylase family SDE12394_RS08270 PF00171 Aldehyde dehydrogenase family SDE12394_RS08275 PF00696 Amino acid kinase family SDE12394_RS08290 PF08951 Enterocin A Immunity SDE12394_RS08295 PF00456 Transketolase, thiamine diphosphate binding domain SDE12394_RS08295 PF02779 Transketolase, pyrimidine binding domain SDE12394_RS08295 PF02780 Transketolase, C-terminal domain SDE12394_RS08300 PF00923 Transaldolase SDE12394_RS08305 PF05043 Mga helix-turn-helix domain SDE12394_RS08310 PF07992 Pyridine nucleotide-disulphide oxidoreductase SDE12394_RS08315 PF00230 Major intrinsic protein SDE12394_RS08320 PF01266 FAD dependent oxidoreductase SDE12394_RS08320 PF16901 SDE12394_RS08320 SDE12394_RS08325 PF00370 FGGY family of carbohydrate kinases, N-terminal domain SDE12394_RS08325 PF02782 FGGY family of carbohydrate kinases, C-terminal domain SDE12394_RS08330 PF03413 Peptidase propeptide and YPEB domain SDE12394_RS08335 PF05979 Bacterial protein of unknown function (DUF896) SDE12394_RS08340 PF02092 SDE12394_RS08340 SDE12394_RS08345 PF02091 Glycyl-tRNA synthetase alpha subunit SDE12394_RS08350 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family SDE12394_RS08355 PF00248 Aldo/keto reductase family SDE12394_RS08360 PF01979 Amidohydrolase family SDE12394_RS08365 PF01895 PhoU domain SDE12394_RS08365 PF02690 SDE12394_RS08365 SDE12394_RS08375 PF02645 Uncharacterised protein, DegV family COG1307 SDE12394_RS08380 PF00440 Bacterial regulatory proteins, tetR family SDE12394_RS08385 PF08282 haloacid dehalogenase-like hydrolase SDE12394_RS08390 PF03458 SDE12394_RS08390 SDE12394_RS08395 PF01791 DeoC/LacD family aldolase SDE12394_RS08400 PF00294 pfkB family carbohydrate kinase SDE12394_RS08405 PF02502 Ribose/Galactose Isomerase SDE12394_RS08410 PF02502 Ribose/Galactose Isomerase SDE12394_RS08415 PF03611 SDE12394_RS08415 SDE12394_RS08420 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SDE12394_RS08425 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SDE12394_RS08430 PF00455 SDE12394_RS08430 SDE12394_RS08430 PF08220 DeoR-like helix-turn-helix domain SDE12394_RS08435 PF00403 Heavy-metal-associated domain SDE12394_RS08440 PF00122 E1-E2 ATPase SDE12394_RS08440 PF00403 Heavy-metal-associated domain SDE12394_RS08440 PF00702 haloacid dehalogenase-like hydrolase SDE12394_RS08445 PF03965 Penicillinase repressor SDE12394_RS08450 PF07859 alpha/beta hydrolase fold SDE12394_RS08455 PF02033 Ribosome-binding factor A SDE12394_RS08460 PF00009 Elongation factor Tu GTP binding domain SDE12394_RS08460 PF04760 Translation initiation factor IF-2, N-terminal region SDE12394_RS08460 PF11987 Translation-initiation factor 2 SDE12394_RS08465 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family SDE12394_RS08470 PF04296 Protein of unknown function (DUF448) SDE12394_RS08475 PF08529 NusA N-terminal domain SDE12394_RS08475 PF13184 NusA-like KH domain SDE12394_RS08480 PF02576 Uncharacterised BCR, YhbC family COG0779 SDE12394_RS08490 PF02390 Putative methyltransferase SDE12394_RS08495 PF01636 Phosphotransferase enzyme family SDE12394_RS08500 PF05975 SDE12394_RS08500 SDE12394_RS08505 PF00005 ABC transporter SDE12394_RS08510 PF01230 HIT domain SDE12394_RS08525 PF00583 Acetyltransferase (GNAT) family SDE12394_RS08530 PF02367 Uncharacterised P-loop hydrolase UPF0079 SDE12394_RS08535 PF00860 Permease family SDE12394_RS08540 PF08282 haloacid dehalogenase-like hydrolase SDE12394_RS08545 PF03610 PTS system fructose IIA component SDE12394_RS08545 PF03830 PTS system sorbose subfamily IIB component SDE12394_RS08550 PF03609 SDE12394_RS08550 SDE12394_RS08555 PF03613 SDE12394_RS08555 SDE12394_RS08560 PF06115 SDE12394_RS08560 SDE12394_RS08565 PF01757 SDE12394_RS08565 SDE12394_RS08570 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SDE12394_RS08570 PF02403 Seryl-tRNA synthetase N-terminal domain SDE12394_RS08575 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit SDE12394_RS08580 PF01039 Carboxyl transferase domain SDE12394_RS08585 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain SDE12394_RS08585 PF02785 Biotin carboxylase C-terminal domain SDE12394_RS08585 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain SDE12394_RS08590 PF07977 FabA-like domain SDE12394_RS08595 PF00364 Biotin-requiring enzyme SDE12394_RS08600 PF00109 Beta-ketoacyl synthase, N-terminal domain SDE12394_RS08600 PF02801 Beta-ketoacyl synthase, C-terminal domain SDE12394_RS08605 PF13561 Enoyl-(Acyl carrier protein) reductase SDE12394_RS08610 PF00698 Acyl transferase domain SDE12394_RS08615 PF03060 Nitronate monooxygenase SDE12394_RS08620 PF00550 Phosphopantetheine attachment site SDE12394_RS08625 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal SDE12394_RS08625 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III SDE12394_RS08630 PF01047 MarR family SDE12394_RS08635 PF00378 Enoyl-CoA hydratase/isomerase family SDE12394_RS08640 PF00226 DnaJ domain SDE12394_RS08640 PF00684 DnaJ central domain SDE12394_RS08640 PF01556 DnaJ C terminal domain SDE12394_RS08650 PF00012 Hsp70 protein SDE12394_RS08655 PF01025 GrpE SDE12394_RS08660 PF01628 HrcA protein C terminal domain SDE12394_RS08660 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding SDE12394_RS08665 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase SDE12394_RS08670 PF02557 D-alanyl-D-alanine carboxypeptidase SDE12394_RS08675 PF00300 Histidine phosphatase superfamily (branch 1) SDE12394_RS08680 PF04226 SDE12394_RS08680 SDE12394_RS08685 PF00892 EamA-like transporter family SDE12394_RS08690 PF02637 GatB domain SDE12394_RS08690 PF02934 GatB/GatE catalytic domain SDE12394_RS08695 PF01425 Amidase SDE12394_RS08700 PF02686 Glu-tRNAGln amidotransferase C subunit SDE12394_RS08705 PF00391 PEP-utilising enzyme, mobile domain SDE12394_RS08705 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain SDE12394_RS08705 PF02896 PEP-utilising enzyme, TIM barrel domain SDE12394_RS08710 PF03618 SDE12394_RS08710 SDE12394_RS08715 PF00571 CBS domain SDE12394_RS08720 PF00581 Rhodanese-like domain SDE12394_RS08725 PF00581 Rhodanese-like domain SDE12394_RS08725 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SDE12394_RS08725 PF07992 Pyridine nucleotide-disulphide oxidoreductase SDE12394_RS08730 PF00581 Rhodanese-like domain SDE12394_RS08735 PF02583 Metal-sensitive transcriptional repressor SDE12394_RS08740 PF00857 Isochorismatase family SDE12394_RS08745 PF06018 CodY GAF-like domain SDE12394_RS08745 PF08222 CodY helix-turn-helix domain SDE12394_RS08750 PF00155 Aminotransferase class I and II SDE12394_RS08755 PF00582 Universal stress protein family SDE12394_RS08760 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase SDE12394_RS08760 PF08282 haloacid dehalogenase-like hydrolase SDE12394_RS08765 PF00710 Asparaginase SDE12394_RS08775 PF00270 DEAD/DEAH box helicase SDE12394_RS08775 PF00271 Helicase conserved C-terminal domain SDE12394_RS08775 PF17191 SDE12394_RS08775 SDE12394_RS08780 PF00005 ABC transporter SDE12394_RS08785 PF02361 Cobalt transport protein SDE12394_RS08790 PF09605 SDE12394_RS08790 SDE12394_RS08795 PF00005 ABC transporter SDE12394_RS08795 PF00664 ABC transporter transmembrane region SDE12394_RS08805 PF00005 ABC transporter SDE12394_RS08810 PF01032 FecCD transport family SDE12394_RS08815 PF01497 Periplasmic binding protein SDE12394_RS08820 PF11545 Cell surface heme-binding protein Shp SDE12394_RS08830 PF05257 CHAP domain SDE12394_RS08835 PF00842 Alanine racemase, C-terminal domain SDE12394_RS08835 PF01168 Alanine racemase, N-terminal domain SDE12394_RS08840 PF01648 4'-phosphopantetheinyl transferase superfamily SDE12394_RS08845 PF01043 SecA preprotein cross-linking domain SDE12394_RS08845 PF02810 SEC-C motif SDE12394_RS08845 PF07516 SecA Wing and Scaffold domain SDE12394_RS08845 PF07517 SecA DEAD-like domain SDE12394_RS08850 PF01238 Phosphomannose isomerase type I SDE12394_RS08855 PF00480 ROK family SDE12394_RS08860 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 SDE12394_RS08860 PF00367 phosphotransferase system, EIIB SDE12394_RS08860 PF02378 Phosphotransferase system, EIIC SDE12394_RS08870 PF00356 Bacterial regulatory proteins, lacI family SDE12394_RS08870 PF13377 Periplasmic binding protein-like domain SDE12394_RS08875 PF01029 NusB family SDE12394_RS08880 PF03780 SDE12394_RS08880 SDE12394_RS08885 PF01132 Elongation factor P (EF-P) OB domain SDE12394_RS08885 PF08207 Elongation factor P (EF-P) KOW-like domain SDE12394_RS08885 PF09285 Elongation factor P, C-terminal SDE12394_RS08890 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region SDE12394_RS08895 PF00557 Metallopeptidase family M24 SDE12394_RS08895 PF01321 Creatinase/Prolidase N-terminal domain SDE12394_RS08900 PF00005 ABC transporter SDE12394_RS08905 PF01544 CorA-like Mg2+ transporter protein SDE12394_RS08910 PF06570 SDE12394_RS08910 SDE12394_RS08915 PF01084 Ribosomal protein S18 SDE12394_RS08920 PF00436 Single-strand binding protein family SDE12394_RS08925 PF01250 Ribosomal protein S6 SDE12394_RS08935 PF00633 Helix-hairpin-helix motif SDE12394_RS08935 PF00730 HhH-GPD superfamily base excision DNA repair protein SDE12394_RS08935 PF14815 NUDIX domain SDE12394_RS08940 PF00085 Thioredoxin SDE12394_RS08945 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SDE12394_RS08945 PF07992 Pyridine nucleotide-disulphide oxidoreductase SDE12394_RS08950 PF00488 MutS domain V SDE12394_RS08950 PF01713 Smr domain SDE12394_RS08955 PF02674 SDE12394_RS08955 SDE12394_RS08965 PF01351 Ribonuclease HII SDE12394_RS08965 PF11858 Domain of unknown function (DUF3378) SDE12394_RS08970 PF00717 Peptidase S24-like SDE12394_RS08975 PF13538 UvrD-like helicase C-terminal domain SDE12394_RS08975 PF13604 AAA domain SDE12394_RS08975 PF14490 Helix-hairpin-helix containing domain SDE12394_RS08985 PF00817 impB/mucB/samB family SDE12394_RS08985 PF11798 IMS family HHH motif SDE12394_RS08985 PF11799 impB/mucB/samB family C-terminal domain SDE12394_RS08990 PF01228 Glycine radical SDE12394_RS08990 PF02901 Pyruvate formate lyase SDE12394_RS08995 PF13673 Acetyltransferase (GNAT) domain SDE12394_RS09000 PF00128 Alpha amylase, catalytic domain SDE12394_RS09005 PF01547 Bacterial extracellular solute-binding protein SDE12394_RS09010 PF04854 SDE12394_RS09010 SDE12394_RS09015 PF00528 Binding-protein-dependent transport system inner membrane component SDE12394_RS09020 PF00528 Binding-protein-dependent transport system inner membrane component SDE12394_RS09025 PF00356 Bacterial regulatory proteins, lacI family SDE12394_RS09025 PF13377 Periplasmic binding protein-like domain SDE12394_RS09030 PF00144 Beta-lactamase SDE12394_RS09035 PF14506 CppA N-terminal SDE12394_RS09035 PF14507 CppA C-terminal SDE12394_RS09040 PF01925 SDE12394_RS09040 SDE12394_RS09045 PF00230 Major intrinsic protein SDE12394_RS09050 PF02129 X-Pro dipeptidyl-peptidase (S15 family) SDE12394_RS09050 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain SDE12394_RS09050 PF09168 X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal SDE12394_RS09055 PF01243 Pyridoxamine 5'-phosphate oxidase SDE12394_RS09060 PF01381 Helix-turn-helix SDE12394_RS09065 PF01381 Helix-turn-helix SDE12394_RS09075 PF13411 MerR HTH family regulatory protein SDE12394_RS09080 PF00929 Exonuclease SDE12394_RS09085 PF04394 SDE12394_RS09085 SDE12394_RS09085 PF08279 HTH domain SDE12394_RS09090 PF03486 HI0933-like protein SDE12394_RS09110 PF00253 Ribosomal protein S14p/S29e SDE12394_RS09115 PF00814 Glycoprotease family SDE12394_RS09120 PF13508 Acetyltransferase (GNAT) domain SDE12394_RS09125 PF00814 Glycoprotease family SDE12394_RS09130 PF07288 Protein of unknown function (DUF1447) SDE12394_RS09135 PF00753 Metallo-beta-lactamase superfamily SDE12394_RS09135 PF07521 RNA-metabolising metallo-beta-lactamase SDE12394_RS09145 PF00005 ABC transporter SDE12394_RS09145 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SDE12394_RS09150 PF00528 Binding-protein-dependent transport system inner membrane component SDE12394_RS09150 PF12911 SDE12394_RS09150 SDE12394_RS09155 PF00528 Binding-protein-dependent transport system inner membrane component SDE12394_RS09160 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SDE12394_RS09165 PF00120 Glutamine synthetase, catalytic domain SDE12394_RS09165 PF03951 Glutamine synthetase, beta-Grasp domain SDE12394_RS09170 PF13411 MerR HTH family regulatory protein SDE12394_RS09175 PF13515 SDE12394_RS09175 SDE12394_RS09185 PF00162 Phosphoglycerate kinase SDE12394_RS09190 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) SDE12394_RS09195 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain SDE12394_RS09195 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain SDE12394_RS09200 PF00009 Elongation factor Tu GTP binding domain SDE12394_RS09200 PF00679 Elongation factor G C-terminus SDE12394_RS09200 PF03144 Elongation factor Tu domain 2 SDE12394_RS09200 PF03764 Elongation factor G, domain IV SDE12394_RS09200 PF14492 Elongation Factor G, domain II SDE12394_RS09205 PF00177 Ribosomal protein S7p/S5e SDE12394_RS09210 PF00164 Ribosomal protein S12/S23 SDE12394_RS09220 PF00156 Phosphoribosyl transferase domain SDE12394_RS09220 PF09182 Bacterial purine repressor, N-terminal SDE12394_RS09225 PF01966 HD domain SDE12394_RS09235 PF04263 Thiamin pyrophosphokinase, catalytic domain SDE12394_RS09235 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain SDE12394_RS09240 PF00834 Ribulose-phosphate 3 epimerase family SDE12394_RS09245 PF03193 Protein of unknown function, DUF258 SDE12394_RS09245 PF16745 SDE12394_RS09245 SDE12394_RS09250 PF00398 Ribosomal RNA adenine dimethylase SDE12394_RS09255 PF13331 SDE12394_RS09255 SDE12394_RS09255 PF13662 Toprim domain SDE12394_RS09260 PF01026 TatD related DNase SDE12394_RS09265 PF00857 Isochorismatase family SDE12394_RS09270 PF01380 SIS domain SDE12394_RS09270 PF01418 Helix-turn-helix domain, rpiR family SDE12394_RS09275 PF00480 ROK family SDE12394_RS09280 PF00701 Dihydrodipicolinate synthetase family SDE12394_RS09285 PF04854 SDE12394_RS09285 SDE12394_RS09290 PF04074 Domain of unknown function (DUF386) SDE12394_RS09295 PF00528 Binding-protein-dependent transport system inner membrane component SDE12394_RS09300 PF00528 Binding-protein-dependent transport system inner membrane component SDE12394_RS09305 PF01547 Bacterial extracellular solute-binding protein SDE12394_RS09310 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase SDE12394_RS09315 PF00468 Ribosomal protein L34 SDE12394_RS09320 PF01424 R3H domain SDE12394_RS09320 PF13083 KH domain SDE12394_RS09320 PF14804 Jag N-terminus SDE12394_RS09325 PF02096 60Kd inner membrane protein SDE12394_RS09330 PF00825 Ribonuclease P SDE12394_RS09335 PF00072 Response regulator receiver domain SDE12394_RS09335 PF04397 LytTr DNA-binding domain SDE12394_RS09340 PF14501 GHKL domain SDE12394_RS09350 PF00749 tRNA synthetases class I (E and Q), catalytic domain SDE12394_RS09355 PF07690 Major Facilitator Superfamily SDE12394_RS09365 PF04397 LytTr DNA-binding domain SDE12394_RS09370 PF01987 Mitochondrial biogenesis AIM24 SDE12394_RS09375 PF00484 Carbonic anhydrase SDE12394_RS09380 PF13481 AAA domain SDE12394_RS09380 PF13541 Subunit ChlI of Mg-chelatase SDE12394_RS09385 PF00692 dUTPase SDE12394_RS09390 PF02677 SDE12394_RS09390 SDE12394_RS09395 PF00005 ABC transporter SDE12394_RS09395 PF00664 ABC transporter transmembrane region SDE12394_RS09400 PF00005 ABC transporter SDE12394_RS09400 PF00664 ABC transporter transmembrane region SDE12394_RS09405 PF12802 MarR family SDE12394_RS09410 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus SDE12394_RS09410 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus SDE12394_RS09415 PF00483 Nucleotidyl transferase SDE12394_RS09430 PF01812 5-formyltetrahydrofolate cyclo-ligase family SDE12394_RS09440 PF00665 Integrase core domain SDE12394_RS09440 PF13936 Helix-turn-helix domain SDE12394_RS09445 PF05043 Mga helix-turn-helix domain SDE12394_RS09445 PF08270 SDE12394_RS09445 SDE12394_RS09445 PF08280 M protein trans-acting positive regulator (MGA) HTH domain SDE12394_RS09465 PF08534 Redoxin SDE12394_RS09475 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase SDE12394_RS09475 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg SDE12394_RS09475 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SDE12394_RS09475 PF10371 Domain of unknown function SDE12394_RS09475 PF13484 SDE12394_RS09475 SDE12394_RS09475 PF17147 SDE12394_RS09475 SDE12394_RS09480 PF00936 BMC domain SDE12394_RS09485 PF00936 BMC domain SDE12394_RS09490 PF06130 SDE12394_RS09490 SDE12394_RS09495 PF00171 Aldehyde dehydrogenase family SDE12394_RS09500 PF00936 BMC domain SDE12394_RS09505 PF06249 Ethanolamine utilisation protein EutQ SDE12394_RS09510 PF03319 Ethanolamine utilisation protein EutN/carboxysome SDE12394_RS09515 PF11104 Type IV pilus assembly protein PilM; SDE12394_RS09525 PF00465 Iron-containing alcohol dehydrogenase SDE12394_RS09530 PF10662 Ethanolamine utilisation - propanediol utilisation SDE12394_RS09535 PF00936 BMC domain SDE12394_RS09540 PF04055 Radical SAM superfamily SDE12394_RS09540 PF13353 4Fe-4S single cluster domain SDE12394_RS09545 PF01228 Glycine radical SDE12394_RS09545 PF02901 Pyruvate formate lyase SDE12394_RS09550 PF00171 Aldehyde dehydrogenase family SDE12394_RS09555 PF00936 BMC domain SDE12394_RS09560 PF00936 BMC domain SDE12394_RS09570 PF00892 EamA-like transporter family SDE12394_RS09575 PF00936 BMC domain SDE12394_RS09580 PF13411 MerR HTH family regulatory protein SDE12394_RS09590 PF01841 Transglutaminase-like superfamily SDE12394_RS09595 PF14437 SDE12394_RS09595 SDE12394_RS09600 PF12706 Beta-lactamase superfamily domain SDE12394_RS09605 PF02632 BioY family SDE12394_RS09610 PF01702 Queuine tRNA-ribosyltransferase SDE12394_RS09620 PF01475 Ferric uptake regulator family SDE12394_RS09625 PF13380 CoA binding domain SDE12394_RS09630 PF00476 DNA polymerase family A SDE12394_RS09630 PF01367 5'-3' exonuclease, C-terminal SAM fold SDE12394_RS09630 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain SDE12394_RS09635 PF00528 Binding-protein-dependent transport system inner membrane component SDE12394_RS09635 PF04069 Substrate binding domain of ABC-type glycine betaine transport system SDE12394_RS09640 PF00005 ABC transporter SDE12394_RS09645 PF00781 Diacylglycerol kinase catalytic domain SDE12394_RS09650 PF13483 Beta-lactamase superfamily domain SDE12394_RS09655 PF00874 PRD domain SDE12394_RS09655 PF08279 HTH domain SDE12394_RS09665 PF00596 Class II Aldolase and Adducin N-terminal domain SDE12394_RS09670 PF01261 Xylose isomerase-like TIM barrel SDE12394_RS09675 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family SDE12394_RS09680 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SDE12394_RS09685 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SDE12394_RS09690 PF03611 SDE12394_RS09690 SDE12394_RS09695 PF00133 tRNA synthetases class I (I, L, M and V) SDE12394_RS09695 PF08264 Anticodon-binding domain of tRNA SDE12394_RS09695 PF09334 tRNA synthetases class I (M) SDE12394_RS09695 PF13603 Leucyl-tRNA synthetase, Domain 2 SDE12394_RS09705 PF00665 Integrase core domain SDE12394_RS09705 PF13936 Helix-turn-helix domain SDE12394_RS09710 PF01527 Transposase SDE12394_RS09715 PF00665 Integrase core domain SDE12394_RS09715 PF13276 SDE12394_RS09715 SDE12394_RS09725 PF00005 ABC transporter SDE12394_RS09725 PF00664 ABC transporter transmembrane region SDE12394_RS09730 PF00899 ThiF family SDE12394_RS09750 PF01289 Thiol-activated cytolysin SDE12394_RS09755 PF16718 SDE12394_RS09755 SDE12394_RS09760 PF07461 Nicotine adenine dinucleotide glycohydrolase (NADase) SDE12394_RS09765 PF00467 KOW motif SDE12394_RS09765 PF02357 Transcription termination factor nusG SDE12394_RS09770 PF00584 SecE/Sec61-gamma subunits of protein translocation complex SDE12394_RS09775 PF00905 Penicillin binding protein transpeptidase domain SDE12394_RS09775 PF00912 Transglycosylase SDE12394_RS09790 PF00849 RNA pseudouridylate synthase SDE12394_RS09800 PF03577 SDE12394_RS09800 SDE12394_RS09805 PF00293 NUDIX domain SDE12394_RS09810 PF00118 TCP-1/cpn60 chaperonin family SDE12394_RS09815 PF00166 Chaperonin 10 Kd subunit SDE12394_RS09820 PF00004 ATPase family associated with various cellular activities (AAA) SDE12394_RS09820 PF02861 Clp amino terminal domain SDE12394_RS09820 PF07724 AAA domain (Cdc48 subfamily) SDE12394_RS09820 PF10431 C-terminal, D2-small domain, of ClpB protein SDE12394_RS09825 PF05848 Firmicute transcriptional repressor of class III stress genes (CtsR) SDE12394_RS09830 PF00313 'Cold-shock' DNA-binding domain SDE12394_RS09850 PF00578 AhpC/TSA family SDE12394_RS09850 PF10417 C-terminal domain of 1-Cys peroxiredoxin SDE12394_RS09855 PF07992 Pyridine nucleotide-disulphide oxidoreductase SDE12394_RS09855 PF13192 Thioredoxin domain SDE12394_RS09860 PF01979 Amidohydrolase family SDE12394_RS09865 PF01175 Urocanase SDE12394_RS09870 PF02971 Formiminotransferase domain SDE12394_RS09870 PF07837 Formiminotransferase domain, N-terminal subdomain SDE12394_RS09875 PF04961 Formiminotransferase-cyclodeaminase SDE12394_RS09880 PF01268 Formate--tetrahydrofolate ligase SDE12394_RS09885 PF05962 HutD SDE12394_RS09890 PF13520 Amino acid permease SDE12394_RS09895 PF00221 Aromatic amino acid lyase SDE12394_RS09900 PF00491 Arginase family SDE12394_RS09905 PF03704 Bacterial transcriptional activator domain SDE12394_RS09905 PF13191 AAA ATPase domain SDE12394_RS09910 PF00318 Ribosomal protein S2 SDE12394_RS09915 PF00889 Elongation factor TS SDE12394_RS09920 PF01431 Peptidase family M13 SDE12394_RS09920 PF05649 Peptidase family M13 SDE12394_RS09925 PF00128 Alpha amylase, catalytic domain SDE12394_RS09925 PF11941 Domain of unknown function (DUF3459) SDE12394_RS09930 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 SDE12394_RS09930 PF00367 phosphotransferase system, EIIB SDE12394_RS09930 PF02378 Phosphotransferase system, EIIC SDE12394_RS09935 PF00392 Bacterial regulatory proteins, gntR family SDE12394_RS09935 PF07702 UTRA domain SDE12394_RS09940 PF01638 HxlR-like helix-turn-helix SDE12394_RS09945 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SDE12394_RS09950 PF03883 SDE12394_RS09950 SDE12394_RS09960 PF13302 Acetyltransferase (GNAT) domain SDE12394_RS09965 PF01408 Oxidoreductase family, NAD-binding Rossmann fold SDE12394_RS09970 PF03477 ATP cone domain SDE12394_RS09970 PF13597 Anaerobic ribonucleoside-triphosphate reductase SDE12394_RS09980 PF06949 SDE12394_RS09980 SDE12394_RS09985 PF03652 Uncharacterised protein family (UPF0081) SDE12394_RS09990 PF06135 SDE12394_RS09990 SDE12394_RS09995 PF03960 ArsC family SDE12394_RS10000 PF00154 recA bacterial DNA recombination protein SDE12394_RS10005 PF00994 Probable molybdopterin binding domain SDE12394_RS10005 PF02464 Competence-damaged protein SDE12394_RS10015 PF03352 Methyladenine glycosylase SDE12394_RS10020 PF01330 RuvA N terminal domain SDE12394_RS10020 PF07499 RuvA, C-terminal domain SDE12394_RS10020 PF14520 Helix-hairpin-helix domain SDE12394_RS10025 PF07690 Major Facilitator Superfamily SDE12394_RS10030 PF01119 DNA mismatch repair protein, C-terminal domain SDE12394_RS10030 PF08676 MutL C terminal dimerisation domain SDE12394_RS10030 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SDE12394_RS10035 PF00488 MutS domain V SDE12394_RS10035 PF01624 MutS domain I SDE12394_RS10035 PF05188 MutS domain II SDE12394_RS10035 PF05190 MutS family domain IV SDE12394_RS10035 PF05192 MutS domain III SDE12394_RS10040 PF06133 Protein of unknown function (DUF964) SDE12394_RS10045 PF01316 Arginine repressor, DNA binding domain SDE12394_RS10045 PF02863 Arginine repressor, C-terminal domain SDE12394_RS10050 PF00750 tRNA synthetases class I (R) SDE12394_RS10050 PF03485 Arginyl tRNA synthetase N terminal domain SDE12394_RS10050 PF05746 DALR anticodon binding domain SDE12394_RS10055 PF00005 ABC transporter SDE12394_RS10060 PF02588 SDE12394_RS10060 SDE12394_RS10060 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) SDE12394_RS10065 PF02588 SDE12394_RS10065 SDE12394_RS10065 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) SDE12394_RS10075 PF00152 tRNA synthetases class II (D, K and N) SDE12394_RS10075 PF01336 OB-fold nucleic acid binding domain SDE12394_RS10075 PF02938 GAD domain SDE12394_RS10080 PF03129 Anticodon binding domain SDE12394_RS10080 PF13393 Histidyl-tRNA synthetase SDE12394_RS10085 PF01783 Ribosomal L32p protein family SDE12394_RS10090 PF00471 Ribosomal protein L33 SDE12394_RS10095 PF03596 SDE12394_RS10095 SDE12394_RS10100 PF01022 Bacterial regulatory protein, arsR family SDE12394_RS10115 PF08281 Sigma-70, region 4 SDE12394_RS10125 PF10412 Type IV secretion-system coupling protein DNA-binding domain SDE12394_RS10135 PF01719 Plasmid replication protein SDE12394_RS10140 PF13411 MerR HTH family regulatory protein SDE12394_RS10145 PF00589 Phage integrase family SDE12394_RS10145 PF14659 Phage integrase, N-terminal SAM-like domain SDE12394_RS10150 PF04018 SDE12394_RS10150 SDE12394_RS10155 PF13192 Thioredoxin domain SDE12394_RS10160 PF00293 NUDIX domain SDE12394_RS10165 PF03551 Transcriptional regulator PadR-like family SDE12394_RS10170 PF08006 SDE12394_RS10170 SDE12394_RS10175 PF13349 SDE12394_RS10175 SDE12394_RS10180 PF12698 ABC-2 family transporter protein SDE12394_RS10185 PF00440 Bacterial regulatory proteins, tetR family SDE12394_RS10190 PF05598 SDE12394_RS10190 SDE12394_RS10190 PF13751 SDE12394_RS10190 SDE12394_RS10195 PF05016 Plasmid stabilisation system protein SDE12394_RS10205 PF07374 SDE12394_RS10205 SDE12394_RS10210 PF04545 Sigma-70, region 4 SDE12394_RS10290 PF02498 SDE12394_RS10290 SDE12394_RS10295 PF01381 Helix-turn-helix SDE12394_RS10305 PF11611 Domain of unknown function (DUF4352) SDE12394_RS10310 PF00589 Phage integrase family SDE12394_RS10310 PF14659 Phage integrase, N-terminal SAM-like domain SDE12394_RS10315 PF00163 Ribosomal protein S4/S9 N-terminal domain SDE12394_RS10315 PF01479 S4 domain SDE12394_RS10320 PF01381 Helix-turn-helix SDE12394_RS10325 PF06257 Protein of unknown function (DUF1021) SDE12394_RS10330 PF00772 DnaB-like helicase N terminal domain SDE12394_RS10330 PF03796 DnaB-like helicase C terminal domain SDE12394_RS10335 PF01281 Ribosomal protein L9, N-terminal domain SDE12394_RS10335 PF03948 Ribosomal protein L9, C-terminal domain SDE12394_RS10340 PF01368 DHH family SDE12394_RS10340 PF02272 DHHA1 domain SDE12394_RS10345 PF01134 Glucose inhibited division protein A SDE12394_RS10345 PF13932 GidA associated domain 3 SDE12394_RS10350 PF00293 NUDIX domain SDE12394_RS10355 PF01914 SDE12394_RS10355 SDE12394_RS10360 PF03054 tRNA methyl transferase SDE12394_RS10365 PF01842 ACT domain SDE12394_RS10365 PF03315 Serine dehydratase beta chain SDE12394_RS10370 PF03313 SDE12394_RS10370 SDE12394_RS10375 PF13419 Haloacid dehalogenase-like hydrolase SDE12394_RS10385 PF02361 Cobalt transport protein SDE12394_RS10390 PF00005 ABC transporter SDE12394_RS10395 PF00005 ABC transporter SDE12394_RS10400 PF01066 CDP-alcohol phosphatidyltransferase SDE12394_RS10405 PF13413 Helix-turn-helix domain SDE12394_RS10410 PF00675 Insulinase (Peptidase family M16) SDE12394_RS10410 PF05193 Peptidase M16 inactive domain SDE12394_RS10415 PF05193 Peptidase M16 inactive domain SDE12394_RS10420 PF13275 S4 domain SDE12394_RS10425 PF02463 RecF/RecN/SMC N terminal domain SDE12394_RS10430 PF06800 SDE12394_RS10430 SDE12394_RS10435 PF00478 IMP dehydrogenase / GMP reductase domain SDE12394_RS10435 PF00571 CBS domain SDE12394_RS10440 PF00579 tRNA synthetases class I (W and Y) SDE12394_RS10445 PF02588 SDE12394_RS10445 SDE12394_RS10445 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) SDE12394_RS10450 PF00005 ABC transporter SDE12394_RS10450 PF12848 ABC transporter SDE12394_RS10455 PF09586 SDE12394_RS10455 SDE12394_RS10470 PF13936 Helix-turn-helix domain SDE12394_RS10480 PF02590 Predicted SPOUT methyltransferase SDE12394_RS10485 PF13180 PDZ domain SDE12394_RS10485 PF13365 Trypsin-like peptidase domain SDE12394_RS10490 PF02195 ParB-like nuclease domain SDE12394_RS10490 PF08535 KorB domain