SDE12394_RS00005 SM00382 ATPases associated with a variety of cellular activities SDE12394_RS00005 SM00760 Bacterial dnaA protein helix-turn-helix domain SDE12394_RS00010 SM00480 DNA polymerase III beta subunit SDE12394_RS00040 SM00487 DEAD-like helicases superfamily SDE12394_RS00040 SM00490 helicase superfamily c-terminal domain SDE12394_RS00040 SM00982 SDE12394_RS00040 SDE12394_RS00040 SM01058 CarD-like/TRCF domain SDE12394_RS00050 SM00363 S4 RNA-binding domain SDE12394_RS00065 SM00977 TilS substrate C-terminal domain SDE12394_RS00075 SM00382 ATPases associated with a variety of cellular activities SDE12394_RS00205 SM01400 SDE12394_RS00205 SDE12394_RS00230 SM01211 SDE12394_RS00230 SDE12394_RS00255 SM00798 AICARFT/IMPCHase bienzyme SDE12394_RS00255 SM00851 MGS-like domain SDE12394_RS00265 SM01209 SDE12394_RS00265 SDE12394_RS00265 SM01210 SDE12394_RS00265 SDE12394_RS00270 SM01001 AIR carboxylase SDE12394_RS00280 SM00974 SDE12394_RS00280 SDE12394_RS00290 SM00998 Adenylosuccinate lyase C-terminus SDE12394_RS00295 SM00530 Helix-turn-helix XRE-family like proteins SDE12394_RS00300 SM00382 ATPases associated with a variety of cellular activities SDE12394_RS00305 SM00226 Low molecular weight phosphatase family SDE12394_RS00310 SM00698 Possible plasma membrane-binding motif in junctophilins, PIP-5-kinases and protein kinases. SDE12394_RS00325 SM00829 Enoylreductase SDE12394_RS00350 SM01403 SDE12394_RS00350 SDE12394_RS00370 SM01382 SDE12394_RS00370 SDE12394_RS00370 SM01383 SDE12394_RS00370 SDE12394_RS00385 SM00322 K homology RNA-binding domain SDE12394_RS00405 SM01374 SDE12394_RS00405 SDE12394_RS00410 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. SDE12394_RS00465 SM00316 Ribosomal protein S1-like RNA-binding domain SDE12394_RS00480 SM00662 RNA polymerases D SDE12394_RS00605 SM00382 ATPases associated with a variety of cellular activities SDE12394_RS00610 SM00382 ATPases associated with a variety of cellular activities SDE12394_RS00625 SM00347 helix_turn_helix multiple antibiotic resistance protein SDE12394_RS00630 SM00382 ATPases associated with a variety of cellular activities SDE12394_RS00640 SM00363 S4 RNA-binding domain SDE12394_RS00655 SM00663 RNA polymerase I subunit A N-terminus SDE12394_RS00665 SM00382 ATPases associated with a variety of cellular activities SDE12394_RS00710 SM00530 Helix-turn-helix XRE-family like proteins SDE12394_RS00825 SM00788 Adenylosuccinate synthetase SDE12394_RS00840 SM00420 helix_turn_helix, Deoxyribose operon repressor SDE12394_RS00840 SM01134 SDE12394_RS00840 SDE12394_RS00910 SM00530 Helix-turn-helix XRE-family like proteins SDE12394_RS00925 SM00382 ATPases associated with a variety of cellular activities SDE12394_RS00975 SM00382 ATPases associated with a variety of cellular activities SDE12394_RS00990 SM00855 Phosphoglycerate mutase family SDE12394_RS01000 SM00530 Helix-turn-helix XRE-family like proteins SDE12394_RS01055 SM00382 ATPases associated with a variety of cellular activities SDE12394_RS01085 SM00354 helix_turn _helix lactose operon repressor SDE12394_RS01140 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. SDE12394_RS01140 SM00954 Region found in RelA / SpoT proteins SDE12394_RS01160 SM00382 ATPases associated with a variety of cellular activities SDE12394_RS01165 SM00642 Alpha-amylase domain SDE12394_RS01170 SM00642 Alpha-amylase domain SDE12394_RS01185 SM01323 SDE12394_RS01185 SDE12394_RS01215 SM00479 SDE12394_RS01215 SDE12394_RS01215 SM00481 DNA polymerase alpha chain like domain SDE12394_RS01220 SM00347 helix_turn_helix multiple antibiotic resistance protein SDE12394_RS01235 SM00100 Cyclic nucleotide-monophosphate binding domain SDE12394_RS01245 SM01387 SDE12394_RS01245 SDE12394_RS01260 SM00382 ATPases associated with a variety of cellular activities SDE12394_RS01290 SM00316 Ribosomal protein S1-like RNA-binding domain SDE12394_RS01290 SM00322 K homology RNA-binding domain SDE12394_RS01310 SM00840 SDE12394_RS01310 SDE12394_RS01335 SM00967 RNA 2'-O ribose methyltransferase substrate binding SDE12394_RS01355 SM00530 Helix-turn-helix XRE-family like proteins SDE12394_RS01430 SM00530 Helix-turn-helix XRE-family like proteins SDE12394_RS01465 SM00530 Helix-turn-helix XRE-family like proteins SDE12394_RS01485 SM00530 Helix-turn-helix XRE-family like proteins SDE12394_RS01500 SM01260 SDE12394_RS01500 SDE12394_RS01630 SM00642 Alpha-amylase domain SDE12394_RS01635 SM00642 Alpha-amylase domain SDE12394_RS01655 SM00387 Histidine kinase-like ATPases SDE12394_RS01660 SM00448 cheY-homologous receiver domain SDE12394_RS01660 SM00850 LytTr DNA-binding domain SDE12394_RS01700 SM01120 SDE12394_RS01700 SDE12394_RS01700 SM01121 SDE12394_RS01700 SDE12394_RS01705 SM00244 prohibitin homologues SDE12394_RS01710 SM00382 ATPases associated with a variety of cellular activities SDE12394_RS01715 SM00062 Bacterial periplasmic substrate-binding proteins SDE12394_RS01740 SM00382 ATPases associated with a variety of cellular activities SDE12394_RS01775 SM00936 Penicillin-binding protein 5, C-terminal domain SDE12394_RS01795 SM00382 ATPases associated with a variety of cellular activities SDE12394_RS01800 SM00382 ATPases associated with a variety of cellular activities SDE12394_RS01860 SM01103 SDE12394_RS01860 SDE12394_RS01870 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. SDE12394_RS01895 SM00422 helix_turn_helix, mercury resistance SDE12394_RS01910 SM00729 Elongator protein 3, MiaB family, Radical SAM SDE12394_RS01910 SM00876 Biotin and Thiamin Synthesis associated domain SDE12394_RS01920 SM00062 Bacterial periplasmic substrate-binding proteins SDE12394_RS01940 SM00382 ATPases associated with a variety of cellular activities SDE12394_RS01940 SM00930 SDE12394_RS01940 SDE12394_RS01990 SM00448 cheY-homologous receiver domain SDE12394_RS01990 SM00862 Transcriptional regulatory protein, C terminal SDE12394_RS01995 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain SDE12394_RS01995 SM00387 Histidine kinase-like ATPases SDE12394_RS01995 SM00388 His Kinase A (phosphoacceptor) domain SDE12394_RS02020 SM00487 DEAD-like helicases superfamily SDE12394_RS02020 SM00490 helicase superfamily c-terminal domain SDE12394_RS02060 SM00967 RNA 2'-O ribose methyltransferase substrate binding SDE12394_RS02095 SM00116 Domain in cystathionine beta-synthase and other proteins. SDE12394_RS02115 SM00363 S4 RNA-binding domain SDE12394_RS02135 SM00014 Acid phosphatase homologues SDE12394_RS02140 SM00729 Elongator protein 3, MiaB family, Radical SAM SDE12394_RS02150 SM01091 Transporter associated domain SDE12394_RS02160 SM01131 SDE12394_RS02160 SDE12394_RS02185 SM00382 ATPases associated with a variety of cellular activities SDE12394_RS02245 SM00382 ATPases associated with a variety of cellular activities SDE12394_RS02250 SM00382 ATPases associated with a variety of cellular activities SDE12394_RS02255 SM00116 Domain in cystathionine beta-synthase and other proteins. SDE12394_RS02325 SM00354 helix_turn _helix lactose operon repressor SDE12394_RS02415 SM01022 SDE12394_RS02415 SDE12394_RS02450 SM00529 Helix-turn-helix diphteria tox regulatory element SDE12394_RS02450 SM00899 SDE12394_RS02450 SDE12394_RS02460 SM00382 ATPases associated with a variety of cellular activities SDE12394_RS02475 SM00382 ATPases associated with a variety of cellular activities SDE12394_RS02475 SM00843 SDE12394_RS02475 SDE12394_RS02485 SM00649 Ribosomal protein L11/L12 SDE12394_RS02525 SM00257 Lysin motif SDE12394_RS02540 SM00986 Uracil DNA glycosylase superfamily SDE12394_RS02540 SM00987 UreE urease accessory protein, C-terminal domain SDE12394_RS02610 SM00382 ATPases associated with a variety of cellular activities SDE12394_RS02670 SM00530 Helix-turn-helix XRE-family like proteins SDE12394_RS02675 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain SDE12394_RS02675 SM01232 SDE12394_RS02675 SDE12394_RS02685 SM00382 ATPases associated with a variety of cellular activities SDE12394_RS02715 SM00316 Ribosomal protein S1-like RNA-binding domain SDE12394_RS02715 SM00955 SDE12394_RS02715 SDE12394_RS02755 SM00354 helix_turn _helix lactose operon repressor SDE12394_RS02760 SM00642 Alpha-amylase domain SDE12394_RS02775 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain SDE12394_RS02780 SM00382 ATPases associated with a variety of cellular activities SDE12394_RS02810 SM01120 SDE12394_RS02810 SDE12394_RS02860 SM00382 ATPases associated with a variety of cellular activities SDE12394_RS02865 SM00448 cheY-homologous receiver domain SDE12394_RS02865 SM00862 Transcriptional regulatory protein, C terminal SDE12394_RS02870 SM00091 PAS domain SDE12394_RS02870 SM00387 Histidine kinase-like ATPases SDE12394_RS02870 SM00388 His Kinase A (phosphoacceptor) domain SDE12394_RS02875 SM00849 Metallo-beta-lactamase superfamily SDE12394_RS02885 SM00968 SMC proteins Flexible Hinge Domain SDE12394_RS02910 SM00382 ATPases associated with a variety of cellular activities SDE12394_RS02910 SM00962 SRP54-type protein, GTPase domain SDE12394_RS02910 SM00963 SRP54-type protein, helical bundle domain SDE12394_RS02920 SM01061 CAT RNA binding domain SDE12394_RS02960 SM00448 cheY-homologous receiver domain SDE12394_RS02960 SM00862 Transcriptional regulatory protein, C terminal SDE12394_RS02965 SM00387 Histidine kinase-like ATPases SDE12394_RS02965 SM00388 His Kinase A (phosphoacceptor) domain SDE12394_RS02985 SM00382 ATPases associated with a variety of cellular activities SDE12394_RS03000 SM00316 Ribosomal protein S1-like RNA-binding domain SDE12394_RS03000 SM00732 Likely ribonuclease with RNase H fold. SDE12394_RS03005 SM00731 SprT homologues. SDE12394_RS03145 SM00530 Helix-turn-helix XRE-family like proteins SDE12394_RS03170 SM00530 Helix-turn-helix XRE-family like proteins SDE12394_RS03190 SM00530 Helix-turn-helix XRE-family like proteins SDE12394_RS03235 SM00855 Phosphoglycerate mutase family SDE12394_RS03380 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. SDE12394_RS03390 SM00831 Cation transporter/ATPase, N-terminus SDE12394_RS03400 SM00354 helix_turn _helix lactose operon repressor SDE12394_RS03515 SM00937 SDE12394_RS03515 SDE12394_RS03520 SM00382 ATPases associated with a variety of cellular activities SDE12394_RS03530 SM00849 Metallo-beta-lactamase superfamily SDE12394_RS03535 SM00479 SDE12394_RS03535 SDE12394_RS03535 SM00487 DEAD-like helicases superfamily SDE12394_RS03535 SM00491 SDE12394_RS03535 SDE12394_RS03580 SM00345 helix_turn_helix gluconate operon transcriptional repressor SDE12394_RS03580 SM00866 SDE12394_RS03580 SDE12394_RS03590 SM01133 SDE12394_RS03590 SDE12394_RS03595 SM00345 helix_turn_helix gluconate operon transcriptional repressor SDE12394_RS03595 SM00866 SDE12394_RS03595 SDE12394_RS03660 SM00830 Chorismate mutase type II SDE12394_RS03710 SM01192 SDE12394_RS03710 SDE12394_RS03710 SM01193 SDE12394_RS03710 SDE12394_RS03740 SM00382 ATPases associated with a variety of cellular activities SDE12394_RS03765 SM00278 Helix-hairpin-helix DNA-binding motif class 1 SDE12394_RS03765 SM00292 breast cancer carboxy-terminal domain SDE12394_RS03765 SM00532 Ligase N family SDE12394_RS03770 SM00046 Diacylglycerol kinase catalytic domain (presumed) SDE12394_RS03775 SM00642 Alpha-amylase domain SDE12394_RS03780 SM00642 Alpha-amylase domain SDE12394_RS03830 SM00382 ATPases associated with a variety of cellular activities SDE12394_RS03855 SM00892 DNA/RNA non-specific endonuclease SDE12394_RS03865 SM00873 B3/4 domain SDE12394_RS03865 SM00874 tRNA synthetase B5 domain SDE12394_RS03865 SM00896 Ferredoxin-fold anticodon binding domain SDE12394_RS03885 SM00382 ATPases associated with a variety of cellular activities SDE12394_RS03910 SM00062 Bacterial periplasmic substrate-binding proteins SDE12394_RS03910 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. SDE12394_RS03960 SM00382 ATPases associated with a variety of cellular activities SDE12394_RS04100 SM00981 SDE12394_RS04100 SDE12394_RS04105 SM00854 Bacterial capsule synthesis protein PGA_cap SDE12394_RS04140 SM00363 S4 RNA-binding domain SDE12394_RS04165 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain SDE12394_RS04170 SM00851 MGS-like domain SDE12394_RS04170 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain SDE12394_RS04170 SM01209 SDE12394_RS04170 SDE12394_RS04180 SM00382 ATPases associated with a variety of cellular activities SDE12394_RS04240 SM00420 helix_turn_helix, Deoxyribose operon repressor SDE12394_RS04240 SM01134 SDE12394_RS04240 SDE12394_RS04255 SM00047 Lysozyme subfamily 2 SDE12394_RS04260 SM00047 Lysozyme subfamily 2 SDE12394_RS04285 SM00382 ATPases associated with a variety of cellular activities SDE12394_RS04290 SM00382 ATPases associated with a variety of cellular activities SDE12394_RS04295 SM00382 ATPases associated with a variety of cellular activities SDE12394_RS04300 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase SDE12394_RS04320 SM00448 cheY-homologous receiver domain SDE12394_RS04320 SM00862 Transcriptional regulatory protein, C terminal SDE12394_RS04325 SM00387 Histidine kinase-like ATPases SDE12394_RS04325 SM00388 His Kinase A (phosphoacceptor) domain SDE12394_RS04395 SM00382 ATPases associated with a variety of cellular activities SDE12394_RS04395 SM00994 ClpX C4-type zinc finger SDE12394_RS04395 SM01086 C-terminal, D2-small domain, of ClpB protein SDE12394_RS04410 SM00382 ATPases associated with a variety of cellular activities SDE12394_RS04410 SM01086 C-terminal, D2-small domain, of ClpB protein SDE12394_RS04515 SM00487 DEAD-like helicases superfamily SDE12394_RS04515 SM00490 helicase superfamily c-terminal domain SDE12394_RS04570 SM00530 Helix-turn-helix XRE-family like proteins SDE12394_RS04625 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor SDE12394_RS04660 SM00530 Helix-turn-helix XRE-family like proteins SDE12394_RS04675 SM00936 Penicillin-binding protein 5, C-terminal domain SDE12394_RS04710 SM00905 Dihydroneopterin aldolase SDE12394_RS04725 SM00382 ATPases associated with a variety of cellular activities SDE12394_RS04745 SM00448 cheY-homologous receiver domain SDE12394_RS04760 SM00919 Malic enzyme, NAD binding domain SDE12394_RS04760 SM01274 SDE12394_RS04760 SDE12394_RS04770 SM00342 helix_turn_helix, arabinose operon control protein SDE12394_RS04795 SM00881 CoA binding domain SDE12394_RS04815 SM01400 SDE12394_RS04815 SDE12394_RS04820 SM01118 SDE12394_RS04820 SDE12394_RS04855 SM00382 ATPases associated with a variety of cellular activities SDE12394_RS04865 SM01240 SDE12394_RS04865 SDE12394_RS04895 SM00937 SDE12394_RS04895 SDE12394_RS04930 SM00382 ATPases associated with a variety of cellular activities SDE12394_RS04935 SM00382 ATPases associated with a variety of cellular activities SDE12394_RS04955 SM00434 DNA Topoisomerase IV SDE12394_RS05015 SM00382 ATPases associated with a variety of cellular activities SDE12394_RS05025 SM00448 cheY-homologous receiver domain SDE12394_RS05025 SM00862 Transcriptional regulatory protein, C terminal SDE12394_RS05080 SM00382 ATPases associated with a variety of cellular activities SDE12394_RS05085 SM00382 ATPases associated with a variety of cellular activities SDE12394_RS05145 SM00345 helix_turn_helix gluconate operon transcriptional repressor SDE12394_RS05145 SM00866 SDE12394_RS05145 SDE12394_RS05155 SM00382 ATPases associated with a variety of cellular activities SDE12394_RS05155 SM00962 SRP54-type protein, GTPase domain SDE12394_RS05155 SM00963 SRP54-type protein, helical bundle domain SDE12394_RS05170 SM00530 Helix-turn-helix XRE-family like proteins SDE12394_RS05185 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain SDE12394_RS05185 SM00387 Histidine kinase-like ATPases SDE12394_RS05185 SM00388 His Kinase A (phosphoacceptor) domain SDE12394_RS05220 SM00900 SDE12394_RS05220 SDE12394_RS05240 SM00387 Histidine kinase-like ATPases SDE12394_RS05245 SM00448 cheY-homologous receiver domain SDE12394_RS05245 SM00862 Transcriptional regulatory protein, C terminal SDE12394_RS05255 SM00382 ATPases associated with a variety of cellular activities SDE12394_RS05260 SM00245 tail specific protease SDE12394_RS05270 SM00764 Citrate lyase ligase C-terminal domain SDE12394_RS05330 SM00345 helix_turn_helix gluconate operon transcriptional repressor SDE12394_RS05330 SM00895 SDE12394_RS05330 SDE12394_RS05400 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain SDE12394_RS05400 SM00437 Bacterial DNA topoisomerase I DNA-binding domain SDE12394_RS05400 SM00493 SDE12394_RS05400 SDE12394_RS05425 SM00220 Serine/Threonine protein kinases, catalytic domain SDE12394_RS05445 SM00530 Helix-turn-helix XRE-family like proteins SDE12394_RS05460 SM00046 Diacylglycerol kinase catalytic domain (presumed) SDE12394_RS05475 SM00382 ATPases associated with a variety of cellular activities SDE12394_RS05495 SM00345 helix_turn_helix gluconate operon transcriptional repressor SDE12394_RS05505 SM00859 Semialdehyde dehydrogenase, NAD binding domain SDE12394_RS05510 SM00155 Phospholipase D. Active site motifs. SDE12394_RS05560 SM00506 Appr-1"-p processing enzyme SDE12394_RS05610 SM00382 ATPases associated with a variety of cellular activities SDE12394_RS05625 SM01133 SDE12394_RS05625 SDE12394_RS05630 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain SDE12394_RS05650 SM00387 Histidine kinase-like ATPases SDE12394_RS05650 SM00388 His Kinase A (phosphoacceptor) domain SDE12394_RS05655 SM00448 cheY-homologous receiver domain SDE12394_RS05655 SM00862 Transcriptional regulatory protein, C terminal SDE12394_RS05670 SM00382 ATPases associated with a variety of cellular activities SDE12394_RS05675 SM00382 ATPases associated with a variety of cellular activities SDE12394_RS05715 SM00904 Riboflavin kinase SDE12394_RS05745 SM00382 ATPases associated with a variety of cellular activities SDE12394_RS05755 SM00345 helix_turn_helix gluconate operon transcriptional repressor SDE12394_RS05810 SM00062 Bacterial periplasmic substrate-binding proteins SDE12394_RS05815 SM00382 ATPases associated with a variety of cellular activities SDE12394_RS05850 SM00481 DNA polymerase alpha chain like domain SDE12394_RS05855 SM00345 helix_turn_helix gluconate operon transcriptional repressor SDE12394_RS05860 SM00382 ATPases associated with a variety of cellular activities SDE12394_RS05890 SM00316 Ribosomal protein S1-like RNA-binding domain SDE12394_RS05915 SM00434 DNA Topoisomerase IV SDE12394_RS05925 SM00387 Histidine kinase-like ATPases SDE12394_RS05925 SM00433 TopoisomeraseII SDE12394_RS05930 SM01207 SDE12394_RS05930 SDE12394_RS05950 SM00062 Bacterial periplasmic substrate-binding proteins SDE12394_RS05975 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family SDE12394_RS06060 SM00465 GIY-YIG type nucleases (URI domain) SDE12394_RS06085 SM01266 SDE12394_RS06085 SDE12394_RS06105 SM00342 helix_turn_helix, arabinose operon control protein SDE12394_RS06105 SM00448 cheY-homologous receiver domain SDE12394_RS06165 SM00838 Elongation factor G C-terminus SDE12394_RS06170 SM00562 SDE12394_RS06170 SDE12394_RS06210 SM00729 Elongator protein 3, MiaB family, Radical SAM SDE12394_RS06275 SM00861 Transketolase, pyrimidine binding domain SDE12394_RS06285 SM00382 ATPases associated with a variety of cellular activities SDE12394_RS06300 SM00849 Metallo-beta-lactamase superfamily SDE12394_RS06305 SM00382 ATPases associated with a variety of cellular activities SDE12394_RS06370 SM00028 Tetratricopeptide repeats SDE12394_RS06430 SM00478 endonuclease III SDE12394_RS06430 SM00525 SDE12394_RS06430 SDE12394_RS06490 SM00450 Rhodanese Homology Domain SDE12394_RS06540 SM00354 helix_turn _helix lactose operon repressor SDE12394_RS06560 SM00642 Alpha-amylase domain SDE12394_RS06590 SM00487 DEAD-like helicases superfamily SDE12394_RS06590 SM00490 helicase superfamily c-terminal domain SDE12394_RS06595 SM00062 Bacterial periplasmic substrate-binding proteins SDE12394_RS06595 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. SDE12394_RS06600 SM00382 ATPases associated with a variety of cellular activities SDE12394_RS06690 SM00382 ATPases associated with a variety of cellular activities SDE12394_RS06740 SM00857 Resolvase, N terminal domain SDE12394_RS06760 SM00382 ATPases associated with a variety of cellular activities SDE12394_RS06780 SM00382 ATPases associated with a variety of cellular activities SDE12394_RS06835 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain SDE12394_RS06835 SM00437 Bacterial DNA topoisomerase I DNA-binding domain SDE12394_RS06835 SM00493 SDE12394_RS06835 SDE12394_RS06935 SM00116 Domain in cystathionine beta-synthase and other proteins. SDE12394_RS06980 SM00345 helix_turn_helix gluconate operon transcriptional repressor SDE12394_RS06980 SM00895 SDE12394_RS06980 SDE12394_RS07010 SM00364 Leucine-rich repeats, bacterial type SDE12394_RS07010 SM00365 Leucine-rich repeat, SDS22-like subfamily SDE12394_RS07010 SM00369 Leucine-rich repeats, typical (most populated) subfamily SDE12394_RS07020 SM00382 ATPases associated with a variety of cellular activities SDE12394_RS07045 SM00487 DEAD-like helicases superfamily SDE12394_RS07045 SM00490 helicase superfamily c-terminal domain SDE12394_RS07100 SM00530 Helix-turn-helix XRE-family like proteins SDE12394_RS07110 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain SDE12394_RS07170 SM00363 S4 RNA-binding domain SDE12394_RS07205 SM00849 Metallo-beta-lactamase superfamily SDE12394_RS07210 SM00278 Helix-hairpin-helix DNA-binding motif class 1 SDE12394_RS07215 SM00563 Phosphate acyltransferases SDE12394_RS07235 SM00487 DEAD-like helicases superfamily SDE12394_RS07235 SM00490 helicase superfamily c-terminal domain SDE12394_RS07250 SM00382 ATPases associated with a variety of cellular activities SDE12394_RS07280 SM00493 SDE12394_RS07280 SDE12394_RS07305 SM00855 Phosphoglycerate mutase family SDE12394_RS07320 SM00530 Helix-turn-helix XRE-family like proteins SDE12394_RS07330 SM00411 bacterial (prokaryotic) histone like domain SDE12394_RS07370 SM00363 S4 RNA-binding domain SDE12394_RS07420 SM00899 SDE12394_RS07420 SDE12394_RS07425 SM00382 ATPases associated with a variety of cellular activities SDE12394_RS07440 SM00382 ATPases associated with a variety of cellular activities SDE12394_RS07440 SM01086 C-terminal, D2-small domain, of ClpB protein SDE12394_RS07465 SM00363 S4 RNA-binding domain SDE12394_RS07485 SM00864 Tubulin/FtsZ family, GTPase domain SDE12394_RS07485 SM00865 Tubulin/FtsZ family, C-terminal domain SDE12394_RS07490 SM00842 Cell division protein FtsA SDE12394_RS07530 SM00838 Elongation factor G C-terminus SDE12394_RS07535 SM00450 Rhodanese Homology Domain SDE12394_RS07560 SM00382 ATPases associated with a variety of cellular activities SDE12394_RS07565 SM00382 ATPases associated with a variety of cellular activities SDE12394_RS07615 SM00354 helix_turn _helix lactose operon repressor SDE12394_RS07675 SM00419 helix_turn_helix, cAMP Regulatory protein SDE12394_RS07685 SM00873 B3/4 domain SDE12394_RS07695 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain SDE12394_RS07695 SM00387 Histidine kinase-like ATPases SDE12394_RS07700 SM00342 helix_turn_helix, arabinose operon control protein SDE12394_RS07700 SM00448 cheY-homologous receiver domain SDE12394_RS07760 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. SDE12394_RS07760 SM00487 DEAD-like helicases superfamily SDE12394_RS07795 SM00347 helix_turn_helix multiple antibiotic resistance protein SDE12394_RS07850 SM00342 helix_turn_helix, arabinose operon control protein SDE12394_RS07850 SM00448 cheY-homologous receiver domain SDE12394_RS07855 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain SDE12394_RS07905 SM00345 helix_turn_helix gluconate operon transcriptional repressor SDE12394_RS07910 SM01149 SDE12394_RS07910 SDE12394_RS07915 SM00872 Alpha mannosidase, middle domain SDE12394_RS07920 SM00470 ParB-like nuclease domain SDE12394_RS08070 SM00316 Ribosomal protein S1-like RNA-binding domain SDE12394_RS08080 SM00421 helix_turn_helix, Lux Regulon SDE12394_RS08080 SM00448 cheY-homologous receiver domain SDE12394_RS08085 SM00387 Histidine kinase-like ATPases SDE12394_RS08095 SM00220 Serine/Threonine protein kinases, catalytic domain SDE12394_RS08095 SM00740 SDE12394_RS08095 SDE12394_RS08100 SM00331 Sigma factor PP2C-like phosphatases SDE12394_RS08100 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain SDE12394_RS08115 SM00487 DEAD-like helicases superfamily SDE12394_RS08115 SM00490 helicase superfamily c-terminal domain SDE12394_RS08120 SM01409 SDE12394_RS08120 SDE12394_RS08125 SM00072 Guanylate kinase homologues. SDE12394_RS08130 SM00322 K homology RNA-binding domain SDE12394_RS08130 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. SDE12394_RS08145 SM00882 Coenzyme A transferase SDE12394_RS08150 SM00882 Coenzyme A transferase SDE12394_RS08175 SM00981 SDE12394_RS08175 SDE12394_RS08230 SM00382 ATPases associated with a variety of cellular activities SDE12394_RS08240 SM00062 Bacterial periplasmic substrate-binding proteins SDE12394_RS08245 SM00487 DEAD-like helicases superfamily SDE12394_RS08245 SM00490 helicase superfamily c-terminal domain SDE12394_RS08295 SM00861 Transketolase, pyrimidine binding domain SDE12394_RS08395 SM01133 SDE12394_RS08395 SDE12394_RS08430 SM00420 helix_turn_helix, Deoxyribose operon repressor SDE12394_RS08430 SM01134 SDE12394_RS08430 SDE12394_RS08475 SM00322 K homology RNA-binding domain SDE12394_RS08505 SM00382 ATPases associated with a variety of cellular activities SDE12394_RS08585 SM00878 Biotin carboxylase C-terminal domain SDE12394_RS08600 SM00825 Beta-ketoacyl synthase SDE12394_RS08605 SM00822 SDE12394_RS08605 SDE12394_RS08610 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. SDE12394_RS08630 SM00347 helix_turn_helix multiple antibiotic resistance protein SDE12394_RS08640 SM00271 DnaJ molecular chaperone homology domain SDE12394_RS08665 SM00047 Lysozyme subfamily 2 SDE12394_RS08675 SM00855 Phosphoglycerate mutase family SDE12394_RS08690 SM00845 GatB domain SDE12394_RS08715 SM00116 Domain in cystathionine beta-synthase and other proteins. SDE12394_RS08720 SM00450 Rhodanese Homology Domain SDE12394_RS08725 SM00450 Rhodanese Homology Domain SDE12394_RS08730 SM00450 Rhodanese Homology Domain SDE12394_RS08765 SM00870 SDE12394_RS08765 SDE12394_RS08775 SM00487 DEAD-like helicases superfamily SDE12394_RS08775 SM00490 helicase superfamily c-terminal domain SDE12394_RS08780 SM00382 ATPases associated with a variety of cellular activities SDE12394_RS08795 SM00382 ATPases associated with a variety of cellular activities SDE12394_RS08805 SM00382 ATPases associated with a variety of cellular activities SDE12394_RS08835 SM01005 Alanine racemase, C-terminal domain SDE12394_RS08845 SM00957 SecA DEAD-like domain SDE12394_RS08845 SM00958 SecA preprotein cross-linking domain SDE12394_RS08870 SM00354 helix_turn _helix lactose operon repressor SDE12394_RS08885 SM00841 Elongation factor P, C-terminal SDE12394_RS08885 SM01185 SDE12394_RS08885 SDE12394_RS08900 SM00382 ATPases associated with a variety of cellular activities SDE12394_RS08935 SM00478 endonuclease III SDE12394_RS08950 SM00463 Small MutS-related domain SDE12394_RS08950 SM00533 DNA-binding domain of DNA mismatch repair MUTS family SDE12394_RS08950 SM00534 ATPase domain of DNA mismatch repair MUTS family SDE12394_RS08975 SM00382 ATPases associated with a variety of cellular activities SDE12394_RS09000 SM00642 Alpha-amylase domain SDE12394_RS09025 SM00354 helix_turn _helix lactose operon repressor SDE12394_RS09050 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain SDE12394_RS09050 SM00940 X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal SDE12394_RS09060 SM00530 Helix-turn-helix XRE-family like proteins SDE12394_RS09065 SM00530 Helix-turn-helix XRE-family like proteins SDE12394_RS09075 SM00422 helix_turn_helix, mercury resistance SDE12394_RS09080 SM00479 SDE12394_RS09080 SDE12394_RS09135 SM00849 Metallo-beta-lactamase superfamily SDE12394_RS09145 SM00382 ATPases associated with a variety of cellular activities SDE12394_RS09165 SM01230 SDE12394_RS09165 SDE12394_RS09170 SM00422 helix_turn_helix, mercury resistance SDE12394_RS09195 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain SDE12394_RS09200 SM00838 Elongation factor G C-terminus SDE12394_RS09200 SM00889 Elongation factor G, domain IV SDE12394_RS09235 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain SDE12394_RS09250 SM00650 Ribosomal RNA adenine dimethylases SDE12394_RS09280 SM01130 SDE12394_RS09280 SDE12394_RS09320 SM00393 Putative single-stranded nucleic acids-binding domain SDE12394_RS09320 SM01245 SDE12394_RS09320 SDE12394_RS09335 SM00448 cheY-homologous receiver domain SDE12394_RS09335 SM00850 LytTr DNA-binding domain SDE12394_RS09365 SM00850 LytTr DNA-binding domain SDE12394_RS09375 SM00947 Carbonic anhydrase SDE12394_RS09380 SM00382 ATPases associated with a variety of cellular activities SDE12394_RS09395 SM00382 ATPases associated with a variety of cellular activities SDE12394_RS09400 SM00382 ATPases associated with a variety of cellular activities SDE12394_RS09405 SM00347 helix_turn_helix multiple antibiotic resistance protein SDE12394_RS09475 SM00890 Domain of unknown function SDE12394_RS09480 SM00877 SDE12394_RS09480 SDE12394_RS09485 SM00877 SDE12394_RS09485 SDE12394_RS09500 SM00877 SDE12394_RS09500 SDE12394_RS09515 SM00842 Cell division protein FtsA SDE12394_RS09535 SM00877 SDE12394_RS09535 SDE12394_RS09555 SM00877 SDE12394_RS09555 SDE12394_RS09560 SM00877 SDE12394_RS09560 SDE12394_RS09575 SM00877 SDE12394_RS09575 SDE12394_RS09580 SM00422 helix_turn_helix, mercury resistance SDE12394_RS09600 SM00849 Metallo-beta-lactamase superfamily SDE12394_RS09625 SM00881 CoA binding domain SDE12394_RS09630 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs SDE12394_RS09630 SM00474 3'-5' exonuclease SDE12394_RS09630 SM00475 5'-3' exonuclease SDE12394_RS09630 SM00482 DNA polymerase A domain SDE12394_RS09640 SM00382 ATPases associated with a variety of cellular activities SDE12394_RS09645 SM00046 Diacylglycerol kinase catalytic domain (presumed) SDE12394_RS09665 SM01007 Class II Aldolase and Adducin N-terminal domain SDE12394_RS09675 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family SDE12394_RS09725 SM00382 ATPases associated with a variety of cellular activities SDE12394_RS09765 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. SDE12394_RS09765 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. SDE12394_RS09815 SM00883 Chaperonin 10 Kd subunit SDE12394_RS09820 SM00382 ATPases associated with a variety of cellular activities SDE12394_RS09820 SM01086 C-terminal, D2-small domain, of ClpB protein SDE12394_RS09830 SM00357 Cold shock protein domain SDE12394_RS09870 SM01221 SDE12394_RS09870 SDE12394_RS09870 SM01222 SDE12394_RS09870 SDE12394_RS09905 SM00028 Tetratricopeptide repeats SDE12394_RS09905 SM01043 Bacterial transcriptional activator domain SDE12394_RS09925 SM00642 Alpha-amylase domain SDE12394_RS09935 SM00345 helix_turn_helix gluconate operon transcriptional repressor SDE12394_RS09935 SM00866 SDE12394_RS09935 SDE12394_RS09985 SM00732 Likely ribonuclease with RNase H fold. SDE12394_RS10000 SM00382 ATPases associated with a variety of cellular activities SDE12394_RS10005 SM00852 Probable molybdopterin binding domain SDE12394_RS10020 SM00278 Helix-hairpin-helix DNA-binding motif class 1 SDE12394_RS10030 SM00853 MutL C terminal dimerisation domain SDE12394_RS10030 SM01340 SDE12394_RS10030 SDE12394_RS10035 SM00533 DNA-binding domain of DNA mismatch repair MUTS family SDE12394_RS10035 SM00534 ATPase domain of DNA mismatch repair MUTS family SDE12394_RS10050 SM00836 DALR anticodon binding domain SDE12394_RS10050 SM01016 Arginyl tRNA synthetase N terminal dom SDE12394_RS10055 SM00382 ATPases associated with a variety of cellular activities SDE12394_RS10100 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor SDE12394_RS10290 SM01040 BRO family, N-terminal domain SDE12394_RS10315 SM00363 S4 RNA-binding domain SDE12394_RS10315 SM01390 SDE12394_RS10315 SDE12394_RS10320 SM00530 Helix-turn-helix XRE-family like proteins SDE12394_RS10345 SM01228 SDE12394_RS10345 SDE12394_RS10390 SM00382 ATPases associated with a variety of cellular activities SDE12394_RS10395 SM00382 ATPases associated with a variety of cellular activities SDE12394_RS10435 SM00116 Domain in cystathionine beta-synthase and other proteins. SDE12394_RS10435 SM01240 SDE12394_RS10435 SDE12394_RS10450 SM00382 ATPases associated with a variety of cellular activities SDE12394_RS10485 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. SDE12394_RS10490 SM00470 ParB-like nuclease domain