SEZ_RS00005	SM00382	ATPases associated with a variety of cellular activities
SEZ_RS00005	SM00760	Bacterial dnaA protein helix-turn-helix domain
SEZ_RS00010	SM00480	DNA polymerase III beta subunit
SEZ_RS00020	SM00530	Helix-turn-helix XRE-family like proteins 
SEZ_RS00035	SM00487	DEAD-like helicases superfamily
SEZ_RS00035	SM00490	helicase superfamily c-terminal domain
SEZ_RS00035	SM00982	SEZ_RS00035
SEZ_RS00035	SM01058	CarD-like/TRCF domain
SEZ_RS00045	SM00363	S4 RNA-binding domain
SEZ_RS00060	SM00977	TilS substrate C-terminal domain
SEZ_RS00070	SM00382	ATPases associated with a variety of cellular activities
SEZ_RS00200	SM01400	SEZ_RS00200
SEZ_RS00225	SM01211	SEZ_RS00225
SEZ_RS00245	SM00798	AICARFT/IMPCHase bienzyme
SEZ_RS00245	SM00851	MGS-like domain
SEZ_RS00255	SM01209	SEZ_RS00255
SEZ_RS00255	SM01210	SEZ_RS00255
SEZ_RS00260	SM01001	AIR carboxylase
SEZ_RS00280	SM00530	Helix-turn-helix XRE-family like proteins 
SEZ_RS00285	SM00382	ATPases associated with a variety of cellular activities
SEZ_RS00290	SM00226	Low molecular weight phosphatase family
SEZ_RS00295	SM00698	Possible plasma membrane-binding motif in junctophilins, PIP-5-kinases and protein kinases.
SEZ_RS00315	SM00829	Enoylreductase
SEZ_RS00320	SM00829	Enoylreductase
SEZ_RS00325	SM00382	ATPases associated with a variety of cellular activities
SEZ_RS00340	SM00530	Helix-turn-helix XRE-family like proteins 
SEZ_RS00360	SM01403	SEZ_RS00360
SEZ_RS00380	SM01382	SEZ_RS00380
SEZ_RS00380	SM01383	SEZ_RS00380
SEZ_RS00395	SM00322	K homology RNA-binding domain
SEZ_RS00415	SM01374	SEZ_RS00415
SEZ_RS00420	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
SEZ_RS00470	SM00316	Ribosomal protein S1-like RNA-binding domain
SEZ_RS00485	SM00662	RNA polymerases D
SEZ_RS00665	SM00347	helix_turn_helix multiple antibiotic resistance protein
SEZ_RS00670	SM00382	ATPases associated with a variety of cellular activities
SEZ_RS00695	SM00663	RNA polymerase I subunit A N-terminus
SEZ_RS00720	SM00382	ATPases associated with a variety of cellular activities
SEZ_RS00805	SM00861	Transketolase, pyrimidine binding domain
SEZ_RS00845	SM00357	Cold shock protein domain
SEZ_RS00855	SM00382	ATPases associated with a variety of cellular activities
SEZ_RS00855	SM01086	C-terminal, D2-small domain, of ClpB protein
SEZ_RS00885	SM00883	Chaperonin 10 Kd subunit
SEZ_RS00915	SM00382	ATPases associated with a variety of cellular activities
SEZ_RS00965	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
SEZ_RS00965	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
SEZ_RS01010	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
SEZ_RS01020	SM01007	Class II Aldolase and Adducin N-terminal domain
SEZ_RS01035	SM00382	ATPases associated with a variety of cellular activities
SEZ_RS01055	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
SEZ_RS01055	SM00474	3'-5' exonuclease
SEZ_RS01055	SM00475	5'-3' exonuclease
SEZ_RS01055	SM00482	DNA polymerase A domain
SEZ_RS01060	SM00881	CoA binding domain
SEZ_RS01075	SM00776	SEZ_RS01075
SEZ_RS01105	SM00849	Metallo-beta-lactamase superfamily
SEZ_RS01135	SM00984	UDP binding domain
SEZ_RS01230	SM00347	helix_turn_helix multiple antibiotic resistance protein
SEZ_RS01235	SM00382	ATPases associated with a variety of cellular activities
SEZ_RS01240	SM00382	ATPases associated with a variety of cellular activities
SEZ_RS01255	SM00382	ATPases associated with a variety of cellular activities
SEZ_RS01265	SM00947	Carbonic anhydrase
SEZ_RS01290	SM00448	cheY-homologous receiver domain
SEZ_RS01290	SM00850	LytTr DNA-binding domain
SEZ_RS01300	SM00382	ATPases associated with a variety of cellular activities
SEZ_RS01335	SM00393	Putative single-stranded nucleic acids-binding domain
SEZ_RS01335	SM01245	SEZ_RS01335
SEZ_RS01400	SM01130	SEZ_RS01400
SEZ_RS01425	SM00493	SEZ_RS01425
SEZ_RS01435	SM00650	Ribosomal RNA adenine dimethylases
SEZ_RS01450	SM00983	Thiamin pyrophosphokinase, vitamin B1 binding domain
SEZ_RS01485	SM00838	Elongation factor G C-terminus
SEZ_RS01485	SM00889	Elongation factor G, domain IV
SEZ_RS01495	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
SEZ_RS01520	SM01230	SEZ_RS01520
SEZ_RS01540	SM00382	ATPases associated with a variety of cellular activities
SEZ_RS01545	SM00382	ATPases associated with a variety of cellular activities
SEZ_RS01550	SM00849	Metallo-beta-lactamase superfamily
SEZ_RS01595	SM00479	SEZ_RS01595
SEZ_RS01600	SM00422	helix_turn_helix, mercury resistance
SEZ_RS01670	SM00530	Helix-turn-helix XRE-family like proteins 
SEZ_RS01685	SM00448	cheY-homologous receiver domain
SEZ_RS01685	SM00862	Transcriptional regulatory protein, C terminal
SEZ_RS01690	SM00387	Histidine kinase-like ATPases
SEZ_RS01690	SM00388	His Kinase A (phosphoacceptor) domain
SEZ_RS01710	SM00530	Helix-turn-helix XRE-family like proteins 
SEZ_RS01715	SM00530	Helix-turn-helix XRE-family like proteins 
SEZ_RS01725	SM00939	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
SEZ_RS01725	SM00940	X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal
SEZ_RS01730	SM00419	helix_turn_helix, cAMP Regulatory protein
SEZ_RS01775	SM00382	ATPases associated with a variety of cellular activities
SEZ_RS01800	SM00463	Small MutS-related domain
SEZ_RS01800	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
SEZ_RS01800	SM00534	ATPase domain of DNA mismatch repair MUTS family
SEZ_RS01830	SM00478	endonuclease III
SEZ_RS01880	SM00382	ATPases associated with a variety of cellular activities
SEZ_RS01895	SM00841	Elongation factor P, C-terminal
SEZ_RS01895	SM01185	SEZ_RS01895
SEZ_RS01940	SM00354	helix_turn _helix lactose operon repressor
SEZ_RS01945	SM00640	Glycosyl hydrolases family 32
SEZ_RS01970	SM00957	SecA DEAD-like domain
SEZ_RS01970	SM00958	SecA preprotein cross-linking domain
SEZ_RS01980	SM01005	Alanine racemase, C-terminal domain
SEZ_RS01990	SM00364	Leucine-rich repeats, bacterial type
SEZ_RS01990	SM00369	Leucine-rich repeats, typical (most populated) subfamily
SEZ_RS01990	SM00725	NEAr Transporter domain
SEZ_RS02010	SM00382	ATPases associated with a variety of cellular activities
SEZ_RS02015	SM00382	ATPases associated with a variety of cellular activities
SEZ_RS02020	SM00382	ATPases associated with a variety of cellular activities
SEZ_RS02035	SM00382	ATPases associated with a variety of cellular activities
SEZ_RS02040	SM00487	DEAD-like helicases superfamily
SEZ_RS02040	SM00490	helicase superfamily c-terminal domain
SEZ_RS02045	SM00870	SEZ_RS02045
SEZ_RS02085	SM00845	GatB domain
SEZ_RS02115	SM00855	Phosphoglycerate mutase family
SEZ_RS02145	SM00271	DnaJ molecular chaperone homology domain
SEZ_RS02155	SM00347	helix_turn_helix multiple antibiotic resistance protein
SEZ_RS02175	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
SEZ_RS02180	SM00822	SEZ_RS02180
SEZ_RS02185	SM00825	Beta-ketoacyl synthase
SEZ_RS02325	SM00322	K homology RNA-binding domain
SEZ_RS02375	SM00420	helix_turn_helix, Deoxyribose operon repressor
SEZ_RS02375	SM01134	SEZ_RS02375
SEZ_RS02395	SM01133	SEZ_RS02395
SEZ_RS02400	SM01061	CAT RNA binding domain
SEZ_RS02445	SM00354	helix_turn _helix lactose operon repressor
SEZ_RS02460	SM00382	ATPases associated with a variety of cellular activities
SEZ_RS02510	SM00382	ATPases associated with a variety of cellular activities
SEZ_RS02560	SM00382	ATPases associated with a variety of cellular activities
SEZ_RS02670	SM00382	ATPases associated with a variety of cellular activities
SEZ_RS02800	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
SEZ_RS02860	SM00342	helix_turn_helix, arabinose operon control protein
SEZ_RS02860	SM00448	cheY-homologous receiver domain
SEZ_RS02865	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SEZ_RS02865	SM00387	Histidine kinase-like ATPases
SEZ_RS02875	SM00873	B3/4 domain
SEZ_RS02890	SM00419	helix_turn_helix, cAMP Regulatory protein
SEZ_RS02955	SM00382	ATPases associated with a variety of cellular activities
SEZ_RS02970	SM00421	helix_turn_helix, Lux Regulon
SEZ_RS02970	SM00448	cheY-homologous receiver domain
SEZ_RS02995	SM00450	Rhodanese Homology Domain
SEZ_RS03000	SM00838	Elongation factor G C-terminus
SEZ_RS03025	SM00842	Cell division protein FtsA
SEZ_RS03075	SM00382	ATPases associated with a variety of cellular activities
SEZ_RS03075	SM01086	C-terminal, D2-small domain, of ClpB protein
SEZ_RS03095	SM00382	ATPases associated with a variety of cellular activities
SEZ_RS03165	SM00411	bacterial (prokaryotic) histone like domain
SEZ_RS03180	SM00530	Helix-turn-helix XRE-family like proteins 
SEZ_RS03200	SM00855	Phosphoglycerate mutase family
SEZ_RS03225	SM00493	SEZ_RS03225
SEZ_RS03250	SM00487	DEAD-like helicases superfamily
SEZ_RS03250	SM00490	helicase superfamily c-terminal domain
SEZ_RS03270	SM00563	Phosphate acyltransferases
SEZ_RS03275	SM00278	Helix-hairpin-helix DNA-binding motif class 1
SEZ_RS03280	SM00849	Metallo-beta-lactamase superfamily
SEZ_RS03310	SM00363	S4 RNA-binding domain
SEZ_RS03350	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
SEZ_RS03355	SM00892	DNA/RNA non-specific endonuclease
SEZ_RS03365	SM00487	DEAD-like helicases superfamily
SEZ_RS03365	SM00490	helicase superfamily c-terminal domain
SEZ_RS03390	SM00382	ATPases associated with a variety of cellular activities
SEZ_RS03410	SM00369	Leucine-rich repeats, typical (most populated) subfamily
SEZ_RS03440	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SEZ_RS03440	SM00895	SEZ_RS03440
SEZ_RS03485	SM00116	Domain in cystathionine beta-synthase and other proteins.
SEZ_RS03520	SM00855	Phosphoglycerate mutase family
SEZ_RS03575	SM00530	Helix-turn-helix XRE-family like proteins 
SEZ_RS03585	SM00382	ATPases associated with a variety of cellular activities
SEZ_RS03590	SM00382	ATPases associated with a variety of cellular activities
SEZ_RS03595	SM00937	SEZ_RS03595
SEZ_RS03600	SM00382	ATPases associated with a variety of cellular activities
SEZ_RS03610	SM00849	Metallo-beta-lactamase superfamily
SEZ_RS03615	SM00479	SEZ_RS03615
SEZ_RS03615	SM00491	SEZ_RS03615
SEZ_RS03670	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SEZ_RS03670	SM00866	SEZ_RS03670
SEZ_RS03680	SM01133	SEZ_RS03680
SEZ_RS03685	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SEZ_RS03685	SM00866	SEZ_RS03685
SEZ_RS03740	SM00830	Chorismate mutase type II
SEZ_RS03760	SM00892	DNA/RNA non-specific endonuclease
SEZ_RS03765	SM00530	Helix-turn-helix XRE-family like proteins 
SEZ_RS03820	SM00387	Histidine kinase-like ATPases
SEZ_RS03820	SM00433	TopoisomeraseII
SEZ_RS03840	SM01192	SEZ_RS03840
SEZ_RS03840	SM01193	SEZ_RS03840
SEZ_RS03885	SM00278	Helix-hairpin-helix DNA-binding motif class 1
SEZ_RS03885	SM00292	breast cancer carboxy-terminal domain
SEZ_RS03885	SM00532	Ligase N family
SEZ_RS03890	SM00046	Diacylglycerol kinase catalytic domain (presumed)
SEZ_RS03895	SM00642	Alpha-amylase domain
SEZ_RS03900	SM00642	Alpha-amylase domain
SEZ_RS03955	SM00382	ATPases associated with a variety of cellular activities
SEZ_RS03980	SM00892	DNA/RNA non-specific endonuclease
SEZ_RS03995	SM00873	B3/4 domain
SEZ_RS03995	SM00874	tRNA synthetase B5 domain
SEZ_RS03995	SM00896	Ferredoxin-fold anticodon binding domain
SEZ_RS04010	SM00382	ATPases associated with a variety of cellular activities
SEZ_RS04070	SM00642	Alpha-amylase domain
SEZ_RS04125	SM00062	Bacterial periplasmic substrate-binding proteins
SEZ_RS04140	SM00400	zinc finger
SEZ_RS04140	SM00493	SEZ_RS04140
SEZ_RS04175	SM00382	ATPases associated with a variety of cellular activities
SEZ_RS04240	SM00257	Lysin motif
SEZ_RS04310	SM00981	SEZ_RS04310
SEZ_RS04345	SM00382	ATPases associated with a variety of cellular activities
SEZ_RS04350	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SEZ_RS04355	SM00481	DNA polymerase alpha chain like domain
SEZ_RS04390	SM00382	ATPases associated with a variety of cellular activities
SEZ_RS04395	SM00062	Bacterial periplasmic substrate-binding proteins
SEZ_RS04440	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SEZ_RS04450	SM00382	ATPases associated with a variety of cellular activities
SEZ_RS04480	SM00904	Riboflavin kinase
SEZ_RS04520	SM00382	ATPases associated with a variety of cellular activities
SEZ_RS04525	SM00382	ATPases associated with a variety of cellular activities
SEZ_RS04540	SM00448	cheY-homologous receiver domain
SEZ_RS04540	SM00862	Transcriptional regulatory protein, C terminal
SEZ_RS04545	SM00387	Histidine kinase-like ATPases
SEZ_RS04545	SM00388	His Kinase A (phosphoacceptor) domain
SEZ_RS04610	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
SEZ_RS04615	SM01133	SEZ_RS04615
SEZ_RS04630	SM00382	ATPases associated with a variety of cellular activities
SEZ_RS04675	SM00155	Phospholipase D. Active site motifs.
SEZ_RS04680	SM00859	Semialdehyde dehydrogenase, NAD binding domain
SEZ_RS04690	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SEZ_RS04705	SM00382	ATPases associated with a variety of cellular activities
SEZ_RS04725	SM00046	Diacylglycerol kinase catalytic domain (presumed)
SEZ_RS04755	SM00448	cheY-homologous receiver domain
SEZ_RS04755	SM00850	LytTr DNA-binding domain
SEZ_RS04765	SM00382	ATPases associated with a variety of cellular activities
SEZ_RS04795	SM00382	ATPases associated with a variety of cellular activities
SEZ_RS04815	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
SEZ_RS04815	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
SEZ_RS04815	SM00493	SEZ_RS04815
SEZ_RS04840	SM00764	Citrate lyase ligase C-terminal domain
SEZ_RS04855	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SEZ_RS04855	SM00895	SEZ_RS04855
SEZ_RS04920	SM00382	ATPases associated with a variety of cellular activities
SEZ_RS04930	SM00448	cheY-homologous receiver domain
SEZ_RS04930	SM00862	Transcriptional regulatory protein, C terminal
SEZ_RS04935	SM00387	Histidine kinase-like ATPases
SEZ_RS04950	SM00530	Helix-turn-helix XRE-family like proteins 
SEZ_RS04965	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SEZ_RS04965	SM00866	SEZ_RS04965
SEZ_RS04975	SM00382	ATPases associated with a variety of cellular activities
SEZ_RS04975	SM00962	SRP54-type protein, GTPase domain
SEZ_RS04975	SM00963	SRP54-type protein, helical bundle domain
SEZ_RS05010	SM00434	DNA Topoisomerase IV
SEZ_RS05055	SM00937	SEZ_RS05055
SEZ_RS05085	SM01240	SEZ_RS05085
SEZ_RS05095	SM00382	ATPases associated with a variety of cellular activities
SEZ_RS05125	SM00954	Region found in RelA / SpoT proteins
SEZ_RS05130	SM01118	SEZ_RS05130
SEZ_RS05135	SM01400	SEZ_RS05135
SEZ_RS05150	SM00881	CoA binding domain
SEZ_RS05200	SM00382	ATPases associated with a variety of cellular activities
SEZ_RS05215	SM00905	Dihydroneopterin aldolase
SEZ_RS05250	SM00892	DNA/RNA non-specific endonuclease
SEZ_RS05255	SM00562	SEZ_RS05255
SEZ_RS05260	SM00382	ATPases associated with a variety of cellular activities
SEZ_RS05260	SM01086	C-terminal, D2-small domain, of ClpB protein
SEZ_RS05275	SM00382	ATPases associated with a variety of cellular activities
SEZ_RS05275	SM00994	ClpX C4-type zinc finger
SEZ_RS05275	SM01086	C-terminal, D2-small domain, of ClpB protein
SEZ_RS05325	SM00382	ATPases associated with a variety of cellular activities
SEZ_RS05345	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
SEZ_RS05350	SM00382	ATPases associated with a variety of cellular activities
SEZ_RS05355	SM00382	ATPases associated with a variety of cellular activities
SEZ_RS05360	SM00382	ATPases associated with a variety of cellular activities
SEZ_RS05380	SM00047	Lysozyme subfamily 2
SEZ_RS05400	SM00530	Helix-turn-helix XRE-family like proteins 
SEZ_RS05405	SM00047	Lysozyme subfamily 2
SEZ_RS05420	SM00420	helix_turn_helix, Deoxyribose operon repressor
SEZ_RS05420	SM01134	SEZ_RS05420
SEZ_RS05470	SM00857	Resolvase, N terminal domain
SEZ_RS05495	SM00382	ATPases associated with a variety of cellular activities
SEZ_RS05505	SM00851	MGS-like domain
SEZ_RS05505	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
SEZ_RS05505	SM01209	SEZ_RS05505
SEZ_RS05510	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
SEZ_RS05535	SM00363	S4 RNA-binding domain
SEZ_RS05565	SM00854	Bacterial capsule synthesis protein PGA_cap
SEZ_RS05600	SM00316	Ribosomal protein S1-like RNA-binding domain
SEZ_RS05625	SM00434	DNA Topoisomerase IV
SEZ_RS05635	SM00387	Histidine kinase-like ATPases
SEZ_RS05635	SM00433	TopoisomeraseII
SEZ_RS05640	SM01207	SEZ_RS05640
SEZ_RS05650	SM00986	Uracil DNA glycosylase superfamily
SEZ_RS05650	SM00987	UreE urease accessory protein, C-terminal domain 
SEZ_RS05665	SM00062	Bacterial periplasmic substrate-binding proteins
SEZ_RS05685	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
SEZ_RS05775	SM00465	GIY-YIG type nucleases (URI domain)
SEZ_RS05785	SM00342	helix_turn_helix, arabinose operon control protein
SEZ_RS05785	SM00448	cheY-homologous receiver domain
SEZ_RS05830	SM00838	Elongation factor G C-terminus
SEZ_RS05875	SM01321	SEZ_RS05875
SEZ_RS05905	SM00729	Elongator protein 3, MiaB family, Radical SAM
SEZ_RS05960	SM00861	Transketolase, pyrimidine binding domain
SEZ_RS05970	SM00382	ATPases associated with a variety of cellular activities
SEZ_RS05985	SM00849	Metallo-beta-lactamase superfamily
SEZ_RS05990	SM00382	ATPases associated with a variety of cellular activities
SEZ_RS06010	SM00028	Tetratricopeptide repeats
SEZ_RS06055	SM00478	endonuclease III
SEZ_RS06055	SM00525	SEZ_RS06055
SEZ_RS06120	SM00354	helix_turn _helix lactose operon repressor
SEZ_RS06155	SM00632	SEZ_RS06155
SEZ_RS06155	SM00642	Alpha-amylase domain
SEZ_RS06155	SM01065	Starch binding domain
SEZ_RS06160	SM00642	Alpha-amylase domain
SEZ_RS06200	SM00487	DEAD-like helicases superfamily
SEZ_RS06200	SM00490	helicase superfamily c-terminal domain
SEZ_RS06205	SM00062	Bacterial periplasmic substrate-binding proteins
SEZ_RS06205	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
SEZ_RS06210	SM00382	ATPases associated with a variety of cellular activities
SEZ_RS06270	SM00363	S4 RNA-binding domain
SEZ_RS06360	SM00354	helix_turn _helix lactose operon repressor
SEZ_RS06385	SM00831	Cation transporter/ATPase, N-terminus
SEZ_RS06395	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
SEZ_RS06445	SM00530	Helix-turn-helix XRE-family like proteins 
SEZ_RS06605	SM00731	SprT homologues.
SEZ_RS06610	SM00316	Ribosomal protein S1-like RNA-binding domain
SEZ_RS06610	SM00732	Likely ribonuclease with RNase H fold.
SEZ_RS06625	SM00382	ATPases associated with a variety of cellular activities
SEZ_RS06645	SM00387	Histidine kinase-like ATPases
SEZ_RS06645	SM00388	His Kinase A (phosphoacceptor) domain
SEZ_RS06650	SM00448	cheY-homologous receiver domain
SEZ_RS06650	SM00862	Transcriptional regulatory protein, C terminal
SEZ_RS06680	SM01061	CAT RNA binding domain
SEZ_RS06685	SM00382	ATPases associated with a variety of cellular activities
SEZ_RS06685	SM00962	SRP54-type protein, GTPase domain
SEZ_RS06685	SM00963	SRP54-type protein, helical bundle domain
SEZ_RS06705	SM00382	ATPases associated with a variety of cellular activities
SEZ_RS06740	SM00968	SMC proteins Flexible Hinge Domain
SEZ_RS06745	SM00358	Double-stranded RNA binding motif
SEZ_RS06745	SM00535	Ribonuclease III family
SEZ_RS06760	SM00849	Metallo-beta-lactamase superfamily
SEZ_RS06765	SM00091	PAS domain
SEZ_RS06765	SM00387	Histidine kinase-like ATPases
SEZ_RS06765	SM00388	His Kinase A (phosphoacceptor) domain
SEZ_RS06770	SM00448	cheY-homologous receiver domain
SEZ_RS06770	SM00862	Transcriptional regulatory protein, C terminal
SEZ_RS06805	SM00382	ATPases associated with a variety of cellular activities
SEZ_RS06810	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
SEZ_RS06825	SM00642	Alpha-amylase domain
SEZ_RS06830	SM00354	helix_turn _helix lactose operon repressor
SEZ_RS06855	SM00316	Ribosomal protein S1-like RNA-binding domain
SEZ_RS06855	SM00955	SEZ_RS06855
SEZ_RS06875	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
SEZ_RS06875	SM01232	SEZ_RS06875
SEZ_RS06935	SM00882	Coenzyme A transferase
SEZ_RS06940	SM00882	Coenzyme A transferase
SEZ_RS06980	SM00986	Uracil DNA glycosylase superfamily
SEZ_RS06980	SM00987	UreE urease accessory protein, C-terminal domain 
SEZ_RS07015	SM00382	ATPases associated with a variety of cellular activities
SEZ_RS07020	SM00382	ATPases associated with a variety of cellular activities
SEZ_RS07055	SM00649	Ribosomal protein L11/L12
SEZ_RS07065	SM00354	helix_turn _helix lactose operon repressor
SEZ_RS07075	SM00382	ATPases associated with a variety of cellular activities
SEZ_RS07075	SM00843	SEZ_RS07075
SEZ_RS07090	SM00382	ATPases associated with a variety of cellular activities
SEZ_RS07100	SM00529	Helix-turn-helix diphteria tox regulatory element
SEZ_RS07100	SM00899	SEZ_RS07100
SEZ_RS07130	SM01022	SEZ_RS07130
SEZ_RS07220	SM00342	helix_turn_helix, arabinose operon control protein
SEZ_RS07220	SM00448	cheY-homologous receiver domain
SEZ_RS07225	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SEZ_RS07270	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SEZ_RS07275	SM01149	SEZ_RS07275
SEZ_RS07280	SM00872	Alpha mannosidase, middle domain
SEZ_RS07285	SM00382	ATPases associated with a variety of cellular activities
SEZ_RS07350	SM00382	ATPases associated with a variety of cellular activities
SEZ_RS07370	SM00448	cheY-homologous receiver domain
SEZ_RS07370	SM00850	LytTr DNA-binding domain
SEZ_RS07435	SM00487	DEAD-like helicases superfamily
SEZ_RS07435	SM00490	helicase superfamily c-terminal domain
SEZ_RS07525	SM00487	DEAD-like helicases superfamily
SEZ_RS07525	SM00490	helicase superfamily c-terminal domain
SEZ_RS07540	SM00316	Ribosomal protein S1-like RNA-binding domain
SEZ_RS07550	SM00421	helix_turn_helix, Lux Regulon
SEZ_RS07550	SM00448	cheY-homologous receiver domain
SEZ_RS07555	SM00387	Histidine kinase-like ATPases
SEZ_RS07565	SM00220	Serine/Threonine protein kinases, catalytic domain
SEZ_RS07565	SM00740	SEZ_RS07565
SEZ_RS07570	SM00331	Sigma factor PP2C-like phosphatases
SEZ_RS07570	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
SEZ_RS07585	SM00487	DEAD-like helicases superfamily
SEZ_RS07585	SM00490	helicase superfamily c-terminal domain
SEZ_RS07590	SM01409	SEZ_RS07590
SEZ_RS07595	SM00072	Guanylate kinase homologues.
SEZ_RS07600	SM00322	K homology RNA-binding domain
SEZ_RS07600	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
SEZ_RS07615	SM00981	SEZ_RS07615
SEZ_RS07670	SM00382	ATPases associated with a variety of cellular activities
SEZ_RS07680	SM00062	Bacterial periplasmic substrate-binding proteins
SEZ_RS07690	SM00487	DEAD-like helicases superfamily
SEZ_RS07690	SM00490	helicase superfamily c-terminal domain
SEZ_RS07700	SM00740	SEZ_RS07700
SEZ_RS07760	SM00861	Transketolase, pyrimidine binding domain
SEZ_RS07850	SM00382	ATPases associated with a variety of cellular activities
SEZ_RS07880	SM01131	SEZ_RS07880
SEZ_RS07890	SM01091	Transporter associated domain
SEZ_RS07905	SM00729	Elongator protein 3, MiaB family, Radical SAM
SEZ_RS07910	SM00014	Acid phosphatase homologues
SEZ_RS07970	SM01234	SEZ_RS07970
SEZ_RS07975	SM00363	S4 RNA-binding domain
SEZ_RS07995	SM00116	Domain in cystathionine beta-synthase and other proteins.
SEZ_RS08035	SM00967	RNA 2'-O ribose methyltransferase substrate binding
SEZ_RS08080	SM00487	DEAD-like helicases superfamily
SEZ_RS08080	SM00490	helicase superfamily c-terminal domain
SEZ_RS08105	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SEZ_RS08105	SM00387	Histidine kinase-like ATPases
SEZ_RS08105	SM00388	His Kinase A (phosphoacceptor) domain
SEZ_RS08110	SM00448	cheY-homologous receiver domain
SEZ_RS08110	SM00862	Transcriptional regulatory protein, C terminal
SEZ_RS08160	SM00382	ATPases associated with a variety of cellular activities
SEZ_RS08160	SM00930	SEZ_RS08160
SEZ_RS08175	SM00062	Bacterial periplasmic substrate-binding proteins
SEZ_RS08185	SM00422	helix_turn_helix, mercury resistance
SEZ_RS08205	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
SEZ_RS08215	SM01103	SEZ_RS08215
SEZ_RS08265	SM00382	ATPases associated with a variety of cellular activities
SEZ_RS08270	SM00382	ATPases associated with a variety of cellular activities
SEZ_RS08290	SM00936	Penicillin-binding protein 5, C-terminal domain 
SEZ_RS08295	SM00936	Penicillin-binding protein 5, C-terminal domain 
SEZ_RS08325	SM00382	ATPases associated with a variety of cellular activities
SEZ_RS08345	SM00062	Bacterial periplasmic substrate-binding proteins
SEZ_RS08350	SM00382	ATPases associated with a variety of cellular activities
SEZ_RS08355	SM00244	prohibitin homologues
SEZ_RS08360	SM01120	SEZ_RS08360
SEZ_RS08360	SM01121	SEZ_RS08360
SEZ_RS08405	SM00642	Alpha-amylase domain
SEZ_RS08495	SM00046	Diacylglycerol kinase catalytic domain (presumed)
SEZ_RS08500	SM00354	helix_turn _helix lactose operon repressor
SEZ_RS08550	SM00967	RNA 2'-O ribose methyltransferase substrate binding
SEZ_RS08560	SM00535	Ribonuclease III family
SEZ_RS08565	SM00840	SEZ_RS08565
SEZ_RS08580	SM00316	Ribosomal protein S1-like RNA-binding domain
SEZ_RS08580	SM00322	K homology RNA-binding domain
SEZ_RS08585	SM01387	SEZ_RS08585
SEZ_RS08605	SM00347	helix_turn_helix multiple antibiotic resistance protein
SEZ_RS08610	SM00479	SEZ_RS08610
SEZ_RS08610	SM00481	DNA polymerase alpha chain like domain
SEZ_RS08640	SM01323	SEZ_RS08640
SEZ_RS08650	SM00642	Alpha-amylase domain
SEZ_RS08655	SM00382	ATPases associated with a variety of cellular activities
SEZ_RS08675	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
SEZ_RS08675	SM00954	Region found in RelA / SpoT proteins
SEZ_RS08685	SM00342	helix_turn_helix, arabinose operon control protein
SEZ_RS08710	SM00354	helix_turn _helix lactose operon repressor
SEZ_RS08715	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
SEZ_RS08765	SM00382	ATPases associated with a variety of cellular activities
SEZ_RS08810	SM00855	Phosphoglycerate mutase family
SEZ_RS08855	SM00420	helix_turn_helix, Deoxyribose operon repressor
SEZ_RS08855	SM01134	SEZ_RS08855
SEZ_RS08865	SM00788	Adenylosuccinate synthetase
SEZ_RS08890	SM00327	von Willebrand factor (vWF) type A domain
SEZ_RS08925	SM00342	helix_turn_helix, arabinose operon control protein
SEZ_RS08950	SM00382	ATPases associated with a variety of cellular activities
SEZ_RS09030	SM00530	Helix-turn-helix XRE-family like proteins 
SEZ_RS09070	SM00732	Likely ribonuclease with RNase H fold.
SEZ_RS09105	SM00382	ATPases associated with a variety of cellular activities
SEZ_RS09110	SM00852	Probable molybdopterin binding domain
SEZ_RS09130	SM00530	Helix-turn-helix XRE-family like proteins 
SEZ_RS09140	SM00278	Helix-hairpin-helix DNA-binding motif class 1
SEZ_RS09150	SM00853	MutL C terminal dimerisation domain
SEZ_RS09150	SM01340	SEZ_RS09150
SEZ_RS09155	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
SEZ_RS09155	SM00534	ATPase domain of DNA mismatch repair MUTS family
SEZ_RS09175	SM00382	ATPases associated with a variety of cellular activities
SEZ_RS09215	SM00530	Helix-turn-helix XRE-family like proteins 
SEZ_RS09245	SM00421	helix_turn_helix, Lux Regulon
SEZ_RS09245	SM00448	cheY-homologous receiver domain
SEZ_RS09260	SM00382	ATPases associated with a variety of cellular activities
SEZ_RS09330	SM00363	S4 RNA-binding domain
SEZ_RS09330	SM01390	SEZ_RS09330
SEZ_RS09400	SM00382	ATPases associated with a variety of cellular activities
SEZ_RS09405	SM00382	ATPases associated with a variety of cellular activities
SEZ_RS09465	SM00116	Domain in cystathionine beta-synthase and other proteins.
SEZ_RS09465	SM01240	SEZ_RS09465
SEZ_RS09480	SM00382	ATPases associated with a variety of cellular activities
SEZ_RS09510	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
SEZ_RS09515	SM00470	ParB-like nuclease domain
SEZ_RS09535	SM00460	Transglutaminase/protease-like homologues
SEZ_RS09540	SM00530	Helix-turn-helix XRE-family like proteins 
SEZ_RS09550	SM00530	Helix-turn-helix XRE-family like proteins 
