CTW00_RS00010 SM01234 CTW00_RS00010 CTW00_RS00015 SM00363 S4 RNA-binding domain CTW00_RS00075 SM00967 RNA 2'-O ribose methyltransferase substrate binding CTW00_RS00135 SM00357 Cold shock protein domain CTW00_RS00140 SM00487 DEAD-like helicases superfamily CTW00_RS00140 SM00490 helicase superfamily c-terminal domain CTW00_RS00165 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CTW00_RS00165 SM00387 Histidine kinase-like ATPases CTW00_RS00165 SM00388 His Kinase A (phosphoacceptor) domain CTW00_RS00170 SM00448 cheY-homologous receiver domain CTW00_RS00170 SM00862 Transcriptional regulatory protein, C terminal CTW00_RS00225 SM00382 ATPases associated with a variety of cellular activities CTW00_RS00225 SM00930 CTW00_RS00225 CTW00_RS00240 SM00062 Bacterial periplasmic substrate-binding proteins CTW00_RS00255 SM00422 helix_turn_helix, mercury resistance CTW00_RS00280 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CTW00_RS00290 SM01103 CTW00_RS00290 CTW00_RS00355 SM00487 DEAD-like helicases superfamily CTW00_RS00355 SM00490 helicase superfamily c-terminal domain CTW00_RS00375 SM00316 Ribosomal protein S1-like RNA-binding domain CTW00_RS00385 SM00421 helix_turn_helix, Lux Regulon CTW00_RS00385 SM00448 cheY-homologous receiver domain CTW00_RS00390 SM00387 Histidine kinase-like ATPases CTW00_RS00400 SM00220 Serine/Threonine protein kinases, catalytic domain CTW00_RS00400 SM00740 CTW00_RS00400 CTW00_RS00405 SM00331 Sigma factor PP2C-like phosphatases CTW00_RS00405 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain CTW00_RS00420 SM00487 DEAD-like helicases superfamily CTW00_RS00420 SM00490 helicase superfamily c-terminal domain CTW00_RS00425 SM01409 CTW00_RS00425 CTW00_RS00430 SM00072 Guanylate kinase homologues. CTW00_RS00435 SM00322 K homology RNA-binding domain CTW00_RS00435 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CTW00_RS00450 SM00981 CTW00_RS00450 CTW00_RS00515 SM00382 ATPases associated with a variety of cellular activities CTW00_RS00525 SM00487 DEAD-like helicases superfamily CTW00_RS00525 SM00490 helicase superfamily c-terminal domain CTW00_RS00535 SM00740 CTW00_RS00535 CTW00_RS00565 SM00382 ATPases associated with a variety of cellular activities CTW00_RS00570 SM00861 Transketolase, pyrimidine binding domain CTW00_RS00695 SM00322 K homology RNA-binding domain CTW00_RS00740 SM00382 ATPases associated with a variety of cellular activities CTW00_RS00830 SM00878 Biotin carboxylase C-terminal domain CTW00_RS00845 SM00825 Beta-ketoacyl synthase CTW00_RS00850 SM00822 CTW00_RS00850 CTW00_RS00855 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. CTW00_RS00875 SM00347 helix_turn_helix multiple antibiotic resistance protein CTW00_RS00885 SM00271 DnaJ molecular chaperone homology domain CTW00_RS00905 SM00047 Lysozyme subfamily 2 CTW00_RS00915 SM00855 Phosphoglycerate mutase family CTW00_RS00940 SM00845 GatB domain CTW00_RS00965 SM00116 Domain in cystathionine beta-synthase and other proteins. CTW00_RS00970 SM00450 Rhodanese Homology Domain CTW00_RS00975 SM00450 Rhodanese Homology Domain CTW00_RS00980 SM00450 Rhodanese Homology Domain CTW00_RS01015 SM00892 DNA/RNA non-specific endonuclease CTW00_RS01020 SM00870 CTW00_RS01020 CTW00_RS01030 SM00487 DEAD-like helicases superfamily CTW00_RS01030 SM00490 helicase superfamily c-terminal domain CTW00_RS01035 SM00382 ATPases associated with a variety of cellular activities CTW00_RS01050 SM00382 ATPases associated with a variety of cellular activities CTW00_RS01055 SM00382 ATPases associated with a variety of cellular activities CTW00_RS01060 SM00382 ATPases associated with a variety of cellular activities CTW00_RS01080 SM00365 Leucine-rich repeat, SDS22-like subfamily CTW00_RS01080 SM00369 Leucine-rich repeats, typical (most populated) subfamily CTW00_RS01080 SM00725 NEAr Transporter domain CTW00_RS01085 SM01005 Alanine racemase, C-terminal domain CTW00_RS01095 SM00957 SecA DEAD-like domain CTW00_RS01095 SM00958 SecA preprotein cross-linking domain CTW00_RS01115 SM00640 Glycosyl hydrolases family 32 CTW00_RS01120 SM00354 helix_turn _helix lactose operon repressor CTW00_RS01135 SM00841 Elongation factor P, C-terminal CTW00_RS01135 SM01185 CTW00_RS01135 CTW00_RS01155 SM00382 ATPases associated with a variety of cellular activities CTW00_RS01205 SM00478 endonuclease III CTW00_RS01220 SM00463 Small MutS-related domain CTW00_RS01220 SM00533 DNA-binding domain of DNA mismatch repair MUTS family CTW00_RS01220 SM00534 ATPase domain of DNA mismatch repair MUTS family CTW00_RS01245 SM00382 ATPases associated with a variety of cellular activities CTW00_RS01295 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain CTW00_RS01295 SM00940 X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal CTW00_RS01300 SM00530 Helix-turn-helix XRE-family like proteins CTW00_RS01305 SM00530 Helix-turn-helix XRE-family like proteins CTW00_RS01375 SM00530 Helix-turn-helix XRE-family like proteins CTW00_RS01390 SM00382 ATPases associated with a variety of cellular activities CTW00_RS01425 SM00422 helix_turn_helix, mercury resistance CTW00_RS01430 SM00479 CTW00_RS01430 CTW00_RS01470 SM00849 Metallo-beta-lactamase superfamily CTW00_RS01475 SM00382 ATPases associated with a variety of cellular activities CTW00_RS01480 SM00382 ATPases associated with a variety of cellular activities CTW00_RS01500 SM01230 CTW00_RS01500 CTW00_RS01505 SM00422 helix_turn_helix, mercury resistance CTW00_RS01525 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CTW00_RS01530 SM00838 Elongation factor G C-terminus CTW00_RS01530 SM00889 Elongation factor G, domain IV CTW00_RS01570 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain CTW00_RS01600 SM00387 Histidine kinase-like ATPases CTW00_RS01605 SM00448 cheY-homologous receiver domain CTW00_RS01610 SM00650 Ribosomal RNA adenine dimethylases CTW00_RS01645 SM01130 CTW00_RS01645 CTW00_RS01725 SM00850 LytTr DNA-binding domain CTW00_RS01735 SM00382 ATPases associated with a variety of cellular activities CTW00_RS01740 SM00393 Putative single-stranded nucleic acids-binding domain CTW00_RS01740 SM01245 CTW00_RS01740 CTW00_RS01765 SM00448 cheY-homologous receiver domain CTW00_RS01765 SM00850 LytTr DNA-binding domain CTW00_RS01790 SM01321 CTW00_RS01790 CTW00_RS01805 SM00947 Carbonic anhydrase CTW00_RS01810 SM00382 ATPases associated with a variety of cellular activities CTW00_RS01825 SM00642 Alpha-amylase domain CTW00_RS01870 SM00382 ATPases associated with a variety of cellular activities CTW00_RS01875 SM00382 ATPases associated with a variety of cellular activities CTW00_RS01880 SM00347 helix_turn_helix multiple antibiotic resistance protein CTW00_RS01905 SM00984 UDP binding domain CTW00_RS01940 SM01208 CTW00_RS01940 CTW00_RS01970 SM00849 Metallo-beta-lactamase superfamily CTW00_RS02005 SM00881 CoA binding domain CTW00_RS02010 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs CTW00_RS02010 SM00474 3'-5' exonuclease CTW00_RS02010 SM00475 5'-3' exonuclease CTW00_RS02010 SM00482 DNA polymerase A domain CTW00_RS02020 SM00382 ATPases associated with a variety of cellular activities CTW00_RS02025 SM00046 Diacylglycerol kinase catalytic domain (presumed) CTW00_RS02075 SM00354 helix_turn _helix lactose operon repressor CTW00_RS02080 SM01007 Class II Aldolase and Adducin N-terminal domain CTW00_RS02090 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family CTW00_RS02155 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. CTW00_RS02155 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. CTW00_RS02210 SM00883 Chaperonin 10 Kd subunit CTW00_RS02215 SM00382 ATPases associated with a variety of cellular activities CTW00_RS02215 SM01086 C-terminal, D2-small domain, of ClpB protein CTW00_RS02225 SM00357 Cold shock protein domain CTW00_RS02270 SM00861 Transketolase, pyrimidine binding domain CTW00_RS02295 SM00642 Alpha-amylase domain CTW00_RS02305 SM00345 helix_turn_helix gluconate operon transcriptional repressor CTW00_RS02305 SM00866 CTW00_RS02305 CTW00_RS02355 SM00899 CTW00_RS02355 CTW00_RS02365 SM00732 Likely ribonuclease with RNase H fold. CTW00_RS02380 SM00382 ATPases associated with a variety of cellular activities CTW00_RS02385 SM00852 Probable molybdopterin binding domain CTW00_RS02395 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CTW00_RS02405 SM00853 MutL C terminal dimerisation domain CTW00_RS02405 SM01340 CTW00_RS02405 CTW00_RS02410 SM00533 DNA-binding domain of DNA mismatch repair MUTS family CTW00_RS02410 SM00534 ATPase domain of DNA mismatch repair MUTS family CTW00_RS02425 SM00836 DALR anticodon binding domain CTW00_RS02425 SM01016 Arginyl tRNA synthetase N terminal dom CTW00_RS02470 SM00530 Helix-turn-helix XRE-family like proteins CTW00_RS02480 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CTW00_RS02480 SM00387 Histidine kinase-like ATPases CTW00_RS02480 SM00388 His Kinase A (phosphoacceptor) domain CTW00_RS02485 SM00448 cheY-homologous receiver domain CTW00_RS02485 SM00862 Transcriptional regulatory protein, C terminal CTW00_RS02495 SM00028 Tetratricopeptide repeats CTW00_RS02495 SM00530 Helix-turn-helix XRE-family like proteins CTW00_RS02530 SM00363 S4 RNA-binding domain CTW00_RS02530 SM01390 CTW00_RS02530 CTW00_RS02555 SM01228 CTW00_RS02555 CTW00_RS02595 SM00382 ATPases associated with a variety of cellular activities CTW00_RS02600 SM00382 ATPases associated with a variety of cellular activities CTW00_RS02640 SM00116 Domain in cystathionine beta-synthase and other proteins. CTW00_RS02640 SM01240 CTW00_RS02640 CTW00_RS02655 SM00382 ATPases associated with a variety of cellular activities CTW00_RS02685 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CTW00_RS02690 SM00470 ParB-like nuclease domain CTW00_RS02695 SM00382 ATPases associated with a variety of cellular activities CTW00_RS02695 SM00760 Bacterial dnaA protein helix-turn-helix domain CTW00_RS02700 SM00480 DNA polymerase III beta subunit CTW00_RS02720 SM00487 DEAD-like helicases superfamily CTW00_RS02720 SM00490 helicase superfamily c-terminal domain CTW00_RS02720 SM00982 CTW00_RS02720 CTW00_RS02720 SM01058 CarD-like/TRCF domain CTW00_RS02730 SM00363 S4 RNA-binding domain CTW00_RS02750 SM00977 TilS substrate C-terminal domain CTW00_RS02760 SM00382 ATPases associated with a variety of cellular activities CTW00_RS02935 SM01400 CTW00_RS02935 CTW00_RS02960 SM00345 helix_turn_helix gluconate operon transcriptional repressor CTW00_RS02960 SM00866 CTW00_RS02960 CTW00_RS02970 SM01133 CTW00_RS02970 CTW00_RS02975 SM00345 helix_turn_helix gluconate operon transcriptional repressor CTW00_RS02975 SM00866 CTW00_RS02975 CTW00_RS03020 SM00998 Adenylosuccinate lyase C-terminus CTW00_RS03025 SM00530 Helix-turn-helix XRE-family like proteins CTW00_RS03030 SM00382 ATPases associated with a variety of cellular activities CTW00_RS03035 SM00226 Low molecular weight phosphatase family CTW00_RS03040 SM00698 Possible plasma membrane-binding motif in junctophilins, PIP-5-kinases and protein kinases. CTW00_RS03075 SM01403 CTW00_RS03075 CTW00_RS03095 SM01382 CTW00_RS03095 CTW00_RS03095 SM01383 CTW00_RS03095 CTW00_RS03110 SM00322 K homology RNA-binding domain CTW00_RS03130 SM01374 CTW00_RS03130 CTW00_RS03135 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. CTW00_RS03190 SM00316 Ribosomal protein S1-like RNA-binding domain CTW00_RS03210 SM00662 RNA polymerases D CTW00_RS03325 SM00530 Helix-turn-helix XRE-family like proteins CTW00_RS03405 SM00829 Enoylreductase CTW00_RS03450 SM00028 Tetratricopeptide repeats CTW00_RS03475 SM00382 ATPases associated with a variety of cellular activities CTW00_RS03495 SM00347 helix_turn_helix multiple antibiotic resistance protein CTW00_RS03500 SM00382 ATPases associated with a variety of cellular activities CTW00_RS03510 SM00363 S4 RNA-binding domain CTW00_RS03525 SM00663 RNA polymerase I subunit A N-terminus CTW00_RS03580 SM00530 Helix-turn-helix XRE-family like proteins CTW00_RS03645 SM00382 ATPases associated with a variety of cellular activities CTW00_RS03700 SM00788 Adenylosuccinate synthetase CTW00_RS03715 SM00420 helix_turn_helix, Deoxyribose operon repressor CTW00_RS03715 SM01134 CTW00_RS03715 CTW00_RS03790 SM00448 cheY-homologous receiver domain CTW00_RS03790 SM00862 Transcriptional regulatory protein, C terminal CTW00_RS03795 SM00387 Histidine kinase-like ATPases CTW00_RS03795 SM00388 His Kinase A (phosphoacceptor) domain CTW00_RS03985 SM00354 helix_turn _helix lactose operon repressor CTW00_RS03995 SM00382 ATPases associated with a variety of cellular activities CTW00_RS04010 SM00421 helix_turn_helix, Lux Regulon CTW00_RS04010 SM00448 cheY-homologous receiver domain CTW00_RS04020 SM00422 helix_turn_helix, mercury resistance CTW00_RS04025 SM00877 CTW00_RS04025 CTW00_RS04035 SM00877 CTW00_RS04035 CTW00_RS04040 SM00877 CTW00_RS04040 CTW00_RS04060 SM00877 CTW00_RS04060 CTW00_RS04080 SM00842 Cell division protein FtsA CTW00_RS04095 SM00877 CTW00_RS04095 CTW00_RS04110 SM00877 CTW00_RS04110 CTW00_RS04115 SM00877 CTW00_RS04115 CTW00_RS04120 SM00877 CTW00_RS04120 CTW00_RS04125 SM00890 Domain of unknown function CTW00_RS04145 SM00382 ATPases associated with a variety of cellular activities CTW00_RS04150 SM00448 cheY-homologous receiver domain CTW00_RS04150 SM00862 Transcriptional regulatory protein, C terminal CTW00_RS04155 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CTW00_RS04155 SM00387 Histidine kinase-like ATPases CTW00_RS04155 SM00388 His Kinase A (phosphoacceptor) domain CTW00_RS04165 SM00530 Helix-turn-helix XRE-family like proteins CTW00_RS04210 SM00382 ATPases associated with a variety of cellular activities CTW00_RS04235 SM00448 cheY-homologous receiver domain CTW00_RS04235 SM00862 Transcriptional regulatory protein, C terminal CTW00_RS04280 SM00382 ATPases associated with a variety of cellular activities CTW00_RS04320 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CTW00_RS04350 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CTW00_RS04350 SM00954 Region found in RelA / SpoT proteins CTW00_RS04375 SM00382 ATPases associated with a variety of cellular activities CTW00_RS04380 SM00642 Alpha-amylase domain CTW00_RS04390 SM00642 Alpha-amylase domain CTW00_RS04395 SM00354 helix_turn _helix lactose operon repressor CTW00_RS04420 SM01323 CTW00_RS04420 CTW00_RS04465 SM00479 CTW00_RS04465 CTW00_RS04465 SM00481 DNA polymerase alpha chain like domain CTW00_RS04470 SM00347 helix_turn_helix multiple antibiotic resistance protein CTW00_RS04485 SM00100 Cyclic nucleotide-monophosphate binding domain CTW00_RS04495 SM01387 CTW00_RS04495 CTW00_RS04500 SM00316 Ribosomal protein S1-like RNA-binding domain CTW00_RS04500 SM00322 K homology RNA-binding domain CTW00_RS04515 SM00840 CTW00_RS04515 CTW00_RS04520 SM00535 Ribonuclease III family CTW00_RS04545 SM01149 CTW00_RS04545 CTW00_RS04550 SM00872 Alpha mannosidase, middle domain CTW00_RS04590 SM00342 helix_turn_helix, arabinose operon control protein CTW00_RS04590 SM00448 cheY-homologous receiver domain CTW00_RS04615 SM00967 RNA 2'-O ribose methyltransferase substrate binding CTW00_RS04680 SM00382 ATPases associated with a variety of cellular activities CTW00_RS04710 SM00257 Lysin motif CTW00_RS04730 SM00764 Citrate lyase ligase C-terminal domain CTW00_RS04740 SM00345 helix_turn_helix gluconate operon transcriptional repressor CTW00_RS04740 SM00895 CTW00_RS04740 CTW00_RS04815 SM00382 ATPases associated with a variety of cellular activities CTW00_RS04915 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CTW00_RS04920 SM00448 cheY-homologous receiver domain CTW00_RS04920 SM00850 LytTr DNA-binding domain CTW00_RS04965 SM01120 CTW00_RS04965 CTW00_RS04965 SM01121 CTW00_RS04965 CTW00_RS04970 SM00244 prohibitin homologues CTW00_RS04980 SM00382 ATPases associated with a variety of cellular activities CTW00_RS04985 SM00062 Bacterial periplasmic substrate-binding proteins CTW00_RS05005 SM00382 ATPases associated with a variety of cellular activities CTW00_RS05045 SM00936 Penicillin-binding protein 5, C-terminal domain CTW00_RS05065 SM00382 ATPases associated with a variety of cellular activities CTW00_RS05070 SM00382 ATPases associated with a variety of cellular activities CTW00_RS05210 SM00957 SecA DEAD-like domain CTW00_RS05210 SM00958 SecA preprotein cross-linking domain CTW00_RS05225 SM00530 Helix-turn-helix XRE-family like proteins CTW00_RS05260 SM00382 ATPases associated with a variety of cellular activities CTW00_RS05265 SM00342 helix_turn_helix, arabinose operon control protein CTW00_RS05290 SM00631 CTW00_RS05290 CTW00_RS05330 SM00382 ATPases associated with a variety of cellular activities CTW00_RS05345 SM00347 helix_turn_helix multiple antibiotic resistance protein CTW00_RS05420 SM00530 Helix-turn-helix XRE-family like proteins CTW00_RS05450 SM00342 helix_turn_helix, arabinose operon control protein CTW00_RS05450 SM00448 cheY-homologous receiver domain CTW00_RS05460 SM00382 ATPases associated with a variety of cellular activities CTW00_RS05480 SM00873 B3/4 domain CTW00_RS05490 SM00100 Cyclic nucleotide-monophosphate binding domain CTW00_RS05490 SM00419 helix_turn_helix, cAMP Regulatory protein CTW00_RS05545 SM00354 helix_turn _helix lactose operon repressor CTW00_RS05560 SM00382 ATPases associated with a variety of cellular activities CTW00_RS05595 SM00382 ATPases associated with a variety of cellular activities CTW00_RS05600 SM00382 ATPases associated with a variety of cellular activities CTW00_RS05620 SM00450 Rhodanese Homology Domain CTW00_RS05625 SM00838 Elongation factor G C-terminus CTW00_RS05650 SM00842 Cell division protein FtsA CTW00_RS05655 SM00864 Tubulin/FtsZ family, GTPase domain CTW00_RS05655 SM00865 Tubulin/FtsZ family, C-terminal domain CTW00_RS05675 SM00363 S4 RNA-binding domain CTW00_RS05700 SM00382 ATPases associated with a variety of cellular activities CTW00_RS05700 SM01086 C-terminal, D2-small domain, of ClpB protein CTW00_RS05715 SM00382 ATPases associated with a variety of cellular activities CTW00_RS05740 SM00363 S4 RNA-binding domain CTW00_RS05775 SM00411 bacterial (prokaryotic) histone like domain CTW00_RS05795 SM00855 Phosphoglycerate mutase family CTW00_RS05820 SM00493 CTW00_RS05820 CTW00_RS05865 SM00487 DEAD-like helicases superfamily CTW00_RS05865 SM00490 helicase superfamily c-terminal domain CTW00_RS05885 SM00563 Phosphate acyltransferases CTW00_RS05890 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CTW00_RS05895 SM00849 Metallo-beta-lactamase superfamily CTW00_RS05985 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain CTW00_RS06065 SM00487 DEAD-like helicases superfamily CTW00_RS06065 SM00490 helicase superfamily c-terminal domain CTW00_RS06080 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CTW00_RS06085 SM00382 ATPases associated with a variety of cellular activities CTW00_RS06100 SM00364 Leucine-rich repeats, bacterial type CTW00_RS06100 SM00365 Leucine-rich repeat, SDS22-like subfamily CTW00_RS06100 SM00369 Leucine-rich repeats, typical (most populated) subfamily CTW00_RS06125 SM00345 helix_turn_helix gluconate operon transcriptional repressor CTW00_RS06125 SM00895 CTW00_RS06125 CTW00_RS06170 SM00116 Domain in cystathionine beta-synthase and other proteins. CTW00_RS06225 SM00530 Helix-turn-helix XRE-family like proteins CTW00_RS06260 SM00382 ATPases associated with a variety of cellular activities CTW00_RS06335 SM00382 ATPases associated with a variety of cellular activities CTW00_RS06365 SM00363 S4 RNA-binding domain CTW00_RS06375 SM00382 ATPases associated with a variety of cellular activities CTW00_RS06380 SM00382 ATPases associated with a variety of cellular activities CTW00_RS06410 SM00382 ATPases associated with a variety of cellular activities CTW00_RS06415 SM00382 ATPases associated with a variety of cellular activities CTW00_RS06420 SM00062 Bacterial periplasmic substrate-binding proteins CTW00_RS06420 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. CTW00_RS06425 SM00487 DEAD-like helicases superfamily CTW00_RS06425 SM00490 helicase superfamily c-terminal domain CTW00_RS06460 SM00642 Alpha-amylase domain CTW00_RS06465 SM00632 CTW00_RS06465 CTW00_RS06465 SM00642 Alpha-amylase domain CTW00_RS06465 SM01065 Starch binding domain CTW00_RS06490 SM00354 helix_turn _helix lactose operon repressor CTW00_RS06510 SM00354 helix_turn _helix lactose operon repressor CTW00_RS06530 SM00450 Rhodanese Homology Domain CTW00_RS06590 SM00478 endonuclease III CTW00_RS06590 SM00525 CTW00_RS06590 CTW00_RS06660 SM00028 Tetratricopeptide repeats CTW00_RS06680 SM00382 ATPases associated with a variety of cellular activities CTW00_RS06685 SM00849 Metallo-beta-lactamase superfamily CTW00_RS06700 SM00382 ATPases associated with a variety of cellular activities CTW00_RS06715 SM00861 Transketolase, pyrimidine binding domain CTW00_RS06765 SM00729 Elongator protein 3, MiaB family, Radical SAM CTW00_RS06810 SM00562 CTW00_RS06810 CTW00_RS06820 SM00838 Elongation factor G C-terminus CTW00_RS06830 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CTW00_RS06875 SM00465 GIY-YIG type nucleases (URI domain) CTW00_RS07005 SM00984 UDP binding domain CTW00_RS07015 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family CTW00_RS07045 SM00062 Bacterial periplasmic substrate-binding proteins CTW00_RS07055 SM00986 Uracil DNA glycosylase superfamily CTW00_RS07055 SM00987 UreE urease accessory protein, C-terminal domain CTW00_RS07065 SM01207 CTW00_RS07065 CTW00_RS07070 SM00387 Histidine kinase-like ATPases CTW00_RS07070 SM00433 TopoisomeraseII CTW00_RS07080 SM00434 DNA Topoisomerase IV CTW00_RS07105 SM00316 Ribosomal protein S1-like RNA-binding domain CTW00_RS07135 SM00382 ATPases associated with a variety of cellular activities CTW00_RS07140 SM00345 helix_turn_helix gluconate operon transcriptional repressor CTW00_RS07145 SM00481 DNA polymerase alpha chain like domain CTW00_RS07200 SM00382 ATPases associated with a variety of cellular activities CTW00_RS07205 SM00062 Bacterial periplasmic substrate-binding proteins CTW00_RS07260 SM00345 helix_turn_helix gluconate operon transcriptional repressor CTW00_RS07275 SM00382 ATPases associated with a variety of cellular activities CTW00_RS07305 SM00904 Riboflavin kinase CTW00_RS07340 SM00382 ATPases associated with a variety of cellular activities CTW00_RS07345 SM00382 ATPases associated with a variety of cellular activities CTW00_RS07360 SM00448 cheY-homologous receiver domain CTW00_RS07360 SM00862 Transcriptional regulatory protein, C terminal CTW00_RS07365 SM00387 Histidine kinase-like ATPases CTW00_RS07365 SM00388 His Kinase A (phosphoacceptor) domain CTW00_RS07385 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain CTW00_RS07390 SM01133 CTW00_RS07390 CTW00_RS07405 SM00382 ATPases associated with a variety of cellular activities CTW00_RS07460 SM00155 Phospholipase D. Active site motifs. CTW00_RS07465 SM00859 Semialdehyde dehydrogenase, NAD binding domain CTW00_RS07470 SM01130 CTW00_RS07470 CTW00_RS07480 SM00345 helix_turn_helix gluconate operon transcriptional repressor CTW00_RS07485 SM00382 ATPases associated with a variety of cellular activities CTW00_RS07505 SM00046 Diacylglycerol kinase catalytic domain (presumed) CTW00_RS07540 SM01266 CTW00_RS07540 CTW00_RS07550 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain CTW00_RS07550 SM00437 Bacterial DNA topoisomerase I DNA-binding domain CTW00_RS07550 SM00493 CTW00_RS07550 CTW00_RS07590 SM00382 ATPases associated with a variety of cellular activities CTW00_RS07600 SM00448 cheY-homologous receiver domain CTW00_RS07600 SM00862 Transcriptional regulatory protein, C terminal CTW00_RS07605 SM00387 Histidine kinase-like ATPases CTW00_RS07625 SM00220 Serine/Threonine protein kinases, catalytic domain CTW00_RS07675 SM00530 Helix-turn-helix XRE-family like proteins CTW00_RS07685 SM00382 ATPases associated with a variety of cellular activities CTW00_RS07685 SM00962 SRP54-type protein, GTPase domain CTW00_RS07685 SM00963 SRP54-type protein, helical bundle domain CTW00_RS07695 SM00345 helix_turn_helix gluconate operon transcriptional repressor CTW00_RS07695 SM00866 CTW00_RS07695 CTW00_RS07740 SM00465 GIY-YIG type nucleases (URI domain) CTW00_RS07770 SM00434 DNA Topoisomerase IV CTW00_RS07815 SM00937 CTW00_RS07815 CTW00_RS07865 SM01240 CTW00_RS07865 CTW00_RS07875 SM00382 ATPases associated with a variety of cellular activities CTW00_RS07910 SM00954 Region found in RelA / SpoT proteins CTW00_RS07915 SM01118 CTW00_RS07915 CTW00_RS07920 SM01400 CTW00_RS07920 CTW00_RS07940 SM00881 CoA binding domain CTW00_RS07965 SM00855 Phosphoglycerate mutase family CTW00_RS07980 SM00342 helix_turn_helix, arabinose operon control protein CTW00_RS07990 SM01061 CAT RNA binding domain CTW00_RS08005 SM00919 Malic enzyme, NAD binding domain CTW00_RS08005 SM01274 CTW00_RS08005 CTW00_RS08020 SM00448 cheY-homologous receiver domain CTW00_RS08040 SM00382 ATPases associated with a variety of cellular activities CTW00_RS08060 SM00905 Dihydroneopterin aldolase CTW00_RS08110 SM01321 CTW00_RS08110 CTW00_RS08145 SM00382 ATPases associated with a variety of cellular activities CTW00_RS08145 SM00994 ClpX C4-type zinc finger CTW00_RS08145 SM01086 C-terminal, D2-small domain, of ClpB protein CTW00_RS08195 SM00382 ATPases associated with a variety of cellular activities CTW00_RS08200 SM00382 ATPases associated with a variety of cellular activities CTW00_RS08215 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CTW00_RS08220 SM00382 ATPases associated with a variety of cellular activities CTW00_RS08225 SM00382 ATPases associated with a variety of cellular activities CTW00_RS08235 SM00382 ATPases associated with a variety of cellular activities CTW00_RS08265 SM01321 CTW00_RS08265 CTW00_RS08270 SM00047 Lysozyme subfamily 2 CTW00_RS08275 SM00047 Lysozyme subfamily 2 CTW00_RS08290 SM00420 helix_turn_helix, Deoxyribose operon repressor CTW00_RS08290 SM01134 CTW00_RS08290 CTW00_RS08345 SM00382 ATPases associated with a variety of cellular activities CTW00_RS08365 SM00363 S4 RNA-binding domain CTW00_RS08410 SM00854 Bacterial capsule synthesis protein PGA_cap CTW00_RS08415 SM00981 CTW00_RS08415 CTW00_RS08560 SM00382 ATPases associated with a variety of cellular activities CTW00_RS08595 SM00400 zinc finger CTW00_RS08595 SM00493 CTW00_RS08595 CTW00_RS08625 SM00382 ATPases associated with a variety of cellular activities CTW00_RS08640 SM00873 B3/4 domain CTW00_RS08640 SM00874 tRNA synthetase B5 domain CTW00_RS08640 SM00896 Ferredoxin-fold anticodon binding domain CTW00_RS08655 SM00892 DNA/RNA non-specific endonuclease CTW00_RS08680 SM00382 ATPases associated with a variety of cellular activities CTW00_RS08730 SM00642 Alpha-amylase domain CTW00_RS08735 SM00642 Alpha-amylase domain CTW00_RS08740 SM00046 Diacylglycerol kinase catalytic domain (presumed) CTW00_RS08745 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CTW00_RS08745 SM00292 breast cancer carboxy-terminal domain CTW00_RS08745 SM00532 Ligase N family CTW00_RS08775 SM00382 ATPases associated with a variety of cellular activities CTW00_RS08815 SM01192 CTW00_RS08815 CTW00_RS08815 SM01193 CTW00_RS08815 CTW00_RS08845 SM00387 Histidine kinase-like ATPases CTW00_RS08845 SM00433 TopoisomeraseII CTW00_RS08880 SM00830 Chorismate mutase type II CTW00_RS08905 SM00062 Bacterial periplasmic substrate-binding proteins CTW00_RS08975 SM00479 CTW00_RS08975 CTW00_RS08975 SM00491 CTW00_RS08975 CTW00_RS08980 SM00849 Metallo-beta-lactamase superfamily CTW00_RS08990 SM00382 ATPases associated with a variety of cellular activities CTW00_RS09025 SM00831 Cation transporter/ATPase, N-terminus CTW00_RS09035 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CTW00_RS09120 SM00855 Phosphoglycerate mutase family CTW00_RS09145 SM01043 Bacterial transcriptional activator domain CTW00_RS09190 SM01221 CTW00_RS09190 CTW00_RS09190 SM01222 CTW00_RS09190 CTW00_RS09275 SM00731 SprT homologues. CTW00_RS09280 SM00316 Ribosomal protein S1-like RNA-binding domain CTW00_RS09280 SM00732 Likely ribonuclease with RNase H fold. CTW00_RS09295 SM00382 ATPases associated with a variety of cellular activities CTW00_RS09315 SM00387 Histidine kinase-like ATPases CTW00_RS09315 SM00388 His Kinase A (phosphoacceptor) domain CTW00_RS09320 SM00448 cheY-homologous receiver domain CTW00_RS09320 SM00862 Transcriptional regulatory protein, C terminal CTW00_RS09390 SM00382 ATPases associated with a variety of cellular activities CTW00_RS09390 SM00962 SRP54-type protein, GTPase domain CTW00_RS09390 SM00963 SRP54-type protein, helical bundle domain CTW00_RS09410 SM00382 ATPases associated with a variety of cellular activities CTW00_RS09425 SM00968 SMC proteins Flexible Hinge Domain CTW00_RS09430 SM00358 Double-stranded RNA binding motif CTW00_RS09430 SM00535 Ribonuclease III family CTW00_RS09435 SM00849 Metallo-beta-lactamase superfamily CTW00_RS09440 SM00091 PAS domain CTW00_RS09440 SM00387 Histidine kinase-like ATPases CTW00_RS09440 SM00388 His Kinase A (phosphoacceptor) domain CTW00_RS09445 SM00448 cheY-homologous receiver domain CTW00_RS09445 SM00862 Transcriptional regulatory protein, C terminal CTW00_RS09450 SM00382 ATPases associated with a variety of cellular activities CTW00_RS09455 SM00062 Bacterial periplasmic substrate-binding proteins CTW00_RS09485 SM01120 CTW00_RS09485 CTW00_RS09510 SM00382 ATPases associated with a variety of cellular activities CTW00_RS09525 SM00382 ATPases associated with a variety of cellular activities CTW00_RS09530 SM01321 CTW00_RS09530 CTW00_RS09535 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain CTW00_RS09550 SM00354 helix_turn _helix lactose operon repressor CTW00_RS09605 SM00316 Ribosomal protein S1-like RNA-binding domain CTW00_RS09605 SM00955 CTW00_RS09605 CTW00_RS09635 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain CTW00_RS09635 SM01232 CTW00_RS09635 CTW00_RS09640 SM00530 Helix-turn-helix XRE-family like proteins CTW00_RS09645 SM00460 Transglutaminase/protease-like homologues CTW00_RS09655 SM00382 ATPases associated with a variety of cellular activities CTW00_RS09695 SM00986 Uracil DNA glycosylase superfamily CTW00_RS09695 SM00987 UreE urease accessory protein, C-terminal domain CTW00_RS09750 SM00649 Ribosomal protein L11/L12 CTW00_RS09765 SM00382 ATPases associated with a variety of cellular activities CTW00_RS09765 SM00843 CTW00_RS09765 CTW00_RS09780 SM00382 ATPases associated with a variety of cellular activities CTW00_RS09790 SM00529 Helix-turn-helix diphteria tox regulatory element CTW00_RS09905 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CTW00_RS09995 SM00116 Domain in cystathionine beta-synthase and other proteins. CTW00_RS10000 SM00382 ATPases associated with a variety of cellular activities CTW00_RS10005 SM00382 ATPases associated with a variety of cellular activities CTW00_RS10070 SM00382 ATPases associated with a variety of cellular activities CTW00_RS10100 SM01131 CTW00_RS10100 CTW00_RS10115 SM01091 Transporter associated domain CTW00_RS10140 SM00382 ATPases associated with a variety of cellular activities CTW00_RS10145 SM00729 Elongator protein 3, MiaB family, Radical SAM CTW00_RS10150 SM00014 Acid phosphatase homologues CTW00_RS10165 SM00857 Resolvase, N terminal domain CTW00_RS10170 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain CTW00_RS10170 SM00437 Bacterial DNA topoisomerase I DNA-binding domain CTW00_RS10170 SM00493 CTW00_RS10170 CTW00_RS10215 SM01059 Chloramphenicol acetyltransferase CTW00_RS10230 SM00650 Ribosomal RNA adenine dimethylases CTW00_RS10240 SM00530 Helix-turn-helix XRE-family like proteins