SIR_RS09750 PF00308 Bacterial dnaA protein SIR_RS09750 PF08299 Bacterial dnaA protein helix-turn-helix SIR_RS09755 PF00712 DNA polymerase III beta subunit, N-terminal domain SIR_RS09755 PF02767 DNA polymerase III beta subunit, central domain SIR_RS09755 PF02768 DNA polymerase III beta subunit, C-terminal domain SIR_RS09760 PF06107 SIR_RS09760 SIR_RS09765 PF06998 Protein of unknown function (DUF1307) SIR_RS09770 PF01926 50S ribosome-binding GTPase SIR_RS09770 PF06071 Protein of unknown function (DUF933) SIR_RS09775 PF01195 Peptidyl-tRNA hydrolase SIR_RS09780 PF00270 DEAD/DEAH box helicase SIR_RS09780 PF00271 Helicase conserved C-terminal domain SIR_RS09780 PF02559 CarD-like/TRCF domain SIR_RS09780 PF03461 TRCF domain SIR_RS09785 PF01479 S4 domain SIR_RS09790 PF04977 Septum formation initiator SIR_RS09795 PF13354 Beta-lactamase enzyme family SIR_RS09800 PF01171 PP-loop family SIR_RS09800 PF11734 TilS substrate C-terminal domain SIR_RS09805 PF00156 Phosphoribosyl transferase domain SIR_RS09810 PF00004 ATPase family associated with various cellular activities (AAA) SIR_RS09810 PF01434 Peptidase family M41 SIR_RS09810 PF06480 FtsH Extracellular SIR_RS09815 PF02973 Sialidase, N-terminal domain SIR_RS09815 PF13088 BNR repeat-like domain SIR_RS09930 PF04085 rod shape-determining protein MreC SIR_RS09935 PF04093 SIR_RS09935 SIR_RS09940 PF05257 CHAP domain SIR_RS09945 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase SIR_RS09945 PF14572 Phosphoribosyl synthetase-associated domain SIR_RS09950 PF00155 Aminotransferase class I and II SIR_RS09955 PF02565 Recombination protein O C terminal SIR_RS09955 PF11967 Recombination protein O N terminal SIR_RS09960 PF02504 Fatty acid synthesis protein SIR_RS09965 PF00550 Phosphopantetheine attachment site SIR_RS09970 PF01259 SAICAR synthetase SIR_RS09975 PF02769 AIR synthase related protein, C-terminal domain SIR_RS09975 PF13507 CobB/CobQ-like glutamine amidotransferase domain SIR_RS09985 PF00156 Phosphoribosyl transferase domain SIR_RS09985 PF13537 Glutamine amidotransferase domain SIR_RS09990 PF00586 AIR synthase related protein, N-terminal domain SIR_RS09990 PF02769 AIR synthase related protein, C-terminal domain SIR_RS09995 PF00551 Formyl transferase SIR_RS10000 PF05076 Suppressor of fused protein (SUFU) SIR_RS10005 PF01808 AICARFT/IMPCHase bienzyme SIR_RS10005 PF02142 MGS-like domain SIR_RS10010 PF05257 CHAP domain SIR_RS10010 PF08481 SIR_RS10010 SIR_RS10025 PF00665 Integrase core domain SIR_RS10035 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain SIR_RS10035 PF02843 Phosphoribosylglycinamide synthetase, C domain SIR_RS10035 PF02844 Phosphoribosylglycinamide synthetase, N domain SIR_RS10040 PF00731 AIR carboxylase SIR_RS10045 PF02222 ATP-grasp domain SIR_RS10060 PF01177 Asp/Glu/Hydantoin racemase SIR_RS10075 PF00206 Lyase SIR_RS10075 PF10397 Adenylosuccinate lyase C-terminus SIR_RS10080 PF00392 Bacterial regulatory proteins, gntR family SIR_RS10080 PF07702 UTRA domain SIR_RS10085 PF01301 Glycosyl hydrolases family 35 SIR_RS10090 PF03830 PTS system sorbose subfamily IIB component SIR_RS10095 PF03609 SIR_RS10095 SIR_RS10100 PF03613 SIR_RS10100 SIR_RS10105 PF03610 PTS system fructose IIA component SIR_RS10110 PF01380 SIS domain SIR_RS10115 PF01791 DeoC/LacD family aldolase SIR_RS10120 PF01263 Aldose 1-epimerase SIR_RS10125 PF01473 Putative cell wall binding repeat SIR_RS10130 PF05491 Holliday junction DNA helicase ruvB C-terminus SIR_RS10130 PF05496 Holliday junction DNA helicase ruvB N-terminus SIR_RS10135 PF06042 Bacterial protein of unknown function (DUF925) SIR_RS10140 PF01345 SIR_RS10140 SIR_RS10145 PF05738 Cna protein B-type domain SIR_RS10145 PF16569 SIR_RS10145 SIR_RS10150 PF04203 Sortase family SIR_RS10155 PF01451 Low molecular weight phosphotyrosine protein phosphatase SIR_RS10160 PF02493 MORN repeat SIR_RS10165 PF01757 SIR_RS10165 SIR_RS10170 PF00171 Aldehyde dehydrogenase family SIR_RS10170 PF00465 Iron-containing alcohol dehydrogenase SIR_RS10175 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase SIR_RS10180 PF01547 Bacterial extracellular solute-binding protein SIR_RS10185 PF00528 Binding-protein-dependent transport system inner membrane component SIR_RS10190 PF00528 Binding-protein-dependent transport system inner membrane component SIR_RS10195 PF04074 Domain of unknown function (DUF386) SIR_RS10200 PF04854 SIR_RS10200 SIR_RS10205 PF00701 Dihydrodipicolinate synthetase family SIR_RS10210 PF00480 ROK family SIR_RS10215 PF01380 SIS domain SIR_RS10215 PF01418 Helix-turn-helix domain, rpiR family SIR_RS10220 PF05913 Bacterial protein of unknown function (DUF871) SIR_RS10225 PF00367 phosphotransferase system, EIIB SIR_RS10225 PF02378 Phosphotransferase system, EIIC SIR_RS10230 PF01380 SIS domain SIR_RS10235 PF01380 SIS domain SIR_RS10235 PF01418 Helix-turn-helix domain, rpiR family SIR_RS10245 PF01496 V-type ATPase 116kDa subunit family SIR_RS10250 PF00137 ATP synthase subunit C SIR_RS10260 PF01992 ATP synthase (C/AC39) subunit SIR_RS10265 PF01990 ATP synthase (F/14-kDa) subunit SIR_RS10270 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SIR_RS10270 PF02874 ATP synthase alpha/beta family, beta-barrel domain SIR_RS10270 PF16886 SIR_RS10270 SIR_RS10275 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SIR_RS10275 PF02874 ATP synthase alpha/beta family, beta-barrel domain SIR_RS10280 PF01813 ATP synthase subunit D SIR_RS10285 PF00291 Pyridoxal-phosphate dependent enzyme SIR_RS10285 PF14821 Threonine synthase N terminus SIR_RS10290 PF01554 MatE SIR_RS10295 PF13419 Haloacid dehalogenase-like hydrolase SIR_RS10305 PF00746 SIR_RS10305 SIR_RS10305 PF05738 Cna protein B-type domain SIR_RS10305 PF12892 T surface-antigen of pili SIR_RS10315 PF01289 Thiol-activated cytolysin SIR_RS10320 PF01047 MarR family SIR_RS10325 PF00005 ABC transporter SIR_RS10330 PF00950 SIR_RS10330 SIR_RS10335 PF01297 Periplasmic solute binding protein family SIR_RS10335 PF09223 YodA lipocalin-like domain SIR_RS10340 PF03965 Penicillinase repressor SIR_RS10345 PF00122 E1-E2 ATPase SIR_RS10345 PF00403 Heavy-metal-associated domain SIR_RS10345 PF00702 haloacid dehalogenase-like hydrolase SIR_RS10350 PF00403 Heavy-metal-associated domain SIR_RS10355 PF00849 RNA pseudouridylate synthase SIR_RS10360 PF00905 Penicillin binding protein transpeptidase domain SIR_RS10360 PF00912 Transglycosylase SIR_RS10365 PF00584 SecE/Sec61-gamma subunits of protein translocation complex SIR_RS10370 PF00467 KOW motif SIR_RS10370 PF02357 Transcription termination factor nusG SIR_RS10385 PF00318 Ribosomal protein S2 SIR_RS10390 PF00889 Elongation factor TS SIR_RS10400 PF05848 Firmicute transcriptional repressor of class III stress genes (CtsR) SIR_RS10405 PF00004 ATPase family associated with various cellular activities (AAA) SIR_RS10405 PF02861 Clp amino terminal domain SIR_RS10405 PF07724 AAA domain (Cdc48 subfamily) SIR_RS10405 PF10431 C-terminal, D2-small domain, of ClpB protein SIR_RS10410 PF00583 Acetyltransferase (GNAT) family SIR_RS10415 PF01207 Dihydrouridine synthase (Dus) SIR_RS10420 PF01430 Hsp33 protein SIR_RS10425 PF05816 SIR_RS10425 SIR_RS10440 PF12844 Helix-turn-helix domain SIR_RS10455 PF04055 Radical SAM superfamily SIR_RS10455 PF13186 Iron-sulfur cluster-binding domain SIR_RS10465 PF00005 ABC transporter SIR_RS10470 PF01061 SIR_RS10470 SIR_RS10480 PF13508 Acetyltransferase (GNAT) domain SIR_RS10490 PF00709 Adenylosuccinate synthetase SIR_RS10505 PF14437 SIR_RS10505 SIR_RS10525 PF00342 Phosphoglucose isomerase SIR_RS10530 PF00370 FGGY family of carbohydrate kinases, N-terminal domain SIR_RS10530 PF02782 FGGY family of carbohydrate kinases, C-terminal domain SIR_RS10535 PF00825 Ribonuclease P SIR_RS10540 PF02096 60Kd inner membrane protein SIR_RS10545 PF01424 R3H domain SIR_RS10545 PF13083 KH domain SIR_RS10545 PF14804 Jag N-terminus SIR_RS10560 PF00468 Ribosomal protein L34 SIR_RS10565 PF01026 TatD related DNase SIR_RS10570 PF01751 Toprim domain SIR_RS10570 PF13331 SIR_RS10570 SIR_RS10575 PF06013 Proteins of 100 residues with WXG SIR_RS10580 PF16888 SIR_RS10580 SIR_RS10590 PF13780 SIR_RS10590 SIR_RS10595 PF04740 SIR_RS10595 SIR_RS10625 PF10140 WXG100 protein secretion system (Wss), protein YukC SIR_RS10630 PF01580 FtsK/SpoIIIE family SIR_RS10650 PF13780 SIR_RS10650 SIR_RS10660 PF15597 SIR_RS10660 SIR_RS10665 PF15597 SIR_RS10665 SIR_RS10670 PF15597 SIR_RS10670 SIR_RS10675 PF15597 SIR_RS10675 SIR_RS10680 PF15597 SIR_RS10680 SIR_RS10685 PF14021 SIR_RS10685 SIR_RS10690 PF15597 SIR_RS10690 SIR_RS10700 PF15597 SIR_RS10700 SIR_RS10755 PF00398 Ribosomal RNA adenine dimethylase SIR_RS10770 PF03193 Protein of unknown function, DUF258 SIR_RS10770 PF16745 SIR_RS10770 SIR_RS10775 PF00834 Ribulose-phosphate 3 epimerase family SIR_RS10780 PF04263 Thiamin pyrophosphokinase, catalytic domain SIR_RS10780 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain SIR_RS10785 PF02646 SIR_RS10785 SIR_RS10790 PF01966 HD domain SIR_RS10795 PF00156 Phosphoribosyl transferase domain SIR_RS10795 PF09182 Bacterial purine repressor, N-terminal SIR_RS10800 PF00164 Ribosomal protein S12/S23 SIR_RS10805 PF00177 Ribosomal protein S7p/S5e SIR_RS10810 PF00009 Elongation factor Tu GTP binding domain SIR_RS10810 PF00679 Elongation factor G C-terminus SIR_RS10810 PF03144 Elongation factor Tu domain 2 SIR_RS10810 PF03764 Elongation factor G, domain IV SIR_RS10810 PF14492 Elongation Factor G, domain II SIR_RS10815 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain SIR_RS10815 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain SIR_RS10820 PF00753 Metallo-beta-lactamase superfamily SIR_RS10820 PF07521 RNA-metabolising metallo-beta-lactamase SIR_RS10825 PF07288 Protein of unknown function (DUF1447) SIR_RS10830 PF00814 Glycoprotease family SIR_RS10835 PF13673 Acetyltransferase (GNAT) domain SIR_RS10840 PF00814 Glycoprotease family SIR_RS10845 PF03795 YCII-related domain SIR_RS10860 PF02517 CAAX protease self-immunity SIR_RS10865 PF07739 TipAS antibiotic-recognition domain SIR_RS10865 PF13411 MerR HTH family regulatory protein SIR_RS10870 PF00293 NUDIX domain SIR_RS10875 PF03486 HI0933-like protein SIR_RS10880 PF04394 SIR_RS10880 SIR_RS10890 PF03009 Glycerophosphoryl diester phosphodiesterase family SIR_RS10890 PF10110 SIR_RS10890 SIR_RS10910 PF00005 ABC transporter SIR_RS10915 PF01381 Helix-turn-helix SIR_RS10915 PF13181 Tetratricopeptide repeat SIR_RS10920 PF02575 YbaB/EbfC DNA-binding family SIR_RS10925 PF02129 X-Pro dipeptidyl-peptidase (S15 family) SIR_RS10925 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain SIR_RS10925 PF09168 X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal SIR_RS10930 PF00230 Major intrinsic protein SIR_RS10940 PF14506 CppA N-terminal SIR_RS10940 PF14507 CppA C-terminal SIR_RS10945 PF00144 Beta-lactamase SIR_RS10950 PF00288 GHMP kinases N terminal domain SIR_RS10950 PF08544 GHMP kinases C terminal SIR_RS10955 PF00288 GHMP kinases N terminal domain SIR_RS10960 PF00288 GHMP kinases N terminal domain SIR_RS10960 PF08544 GHMP kinases C terminal SIR_RS10965 PF01070 FMN-dependent dehydrogenase SIR_RS10970 PF00368 Hydroxymethylglutaryl-coenzyme A reductase SIR_RS10975 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal SIR_RS10975 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal SIR_RS10980 PF12821 SIR_RS10980 SIR_RS10985 PF06738 SIR_RS10985 SIR_RS10990 PF01228 Glycine radical SIR_RS10990 PF02901 Pyruvate formate lyase SIR_RS10995 PF00817 impB/mucB/samB family SIR_RS10995 PF11798 IMS family HHH motif SIR_RS10995 PF11799 impB/mucB/samB family C-terminal domain SIR_RS11000 PF13538 UvrD-like helicase C-terminal domain SIR_RS11000 PF13604 AAA domain SIR_RS11000 PF14490 Helix-hairpin-helix containing domain SIR_RS11005 PF00717 Peptidase S24-like SIR_RS11010 PF01351 Ribonuclease HII SIR_RS11010 PF11858 Domain of unknown function (DUF3378) SIR_RS11020 PF02674 SIR_RS11020 SIR_RS11025 PF00488 MutS domain V SIR_RS11025 PF01713 Smr domain SIR_RS11030 PF03577 SIR_RS11030 SIR_RS11035 PF00085 Thioredoxin SIR_RS11040 PF16157 SIR_RS11040 SIR_RS11045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SIR_RS11055 PF13520 Amino acid permease SIR_RS11060 PF00924 Mechanosensitive ion channel SIR_RS11065 PF10026 SIR_RS11065 SIR_RS11075 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase SIR_RS11075 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain SIR_RS11080 PF01180 Dihydroorotate dehydrogenase SIR_RS11085 PF01625 Peptide methionine sulfoxide reductase SIR_RS11085 PF01641 SelR domain SIR_RS11090 PF01979 Amidohydrolase family SIR_RS11095 PF09683 Bacteriocin (Lactococcin_972) SIR_RS11100 PF07242 SIR_RS11100 SIR_RS11105 PF00005 ABC transporter SIR_RS11110 PF00480 ROK family SIR_RS11115 PF02378 Phosphotransferase system, EIIC SIR_RS11125 PF00722 Glycosyl hydrolases family 16 SIR_RS11125 PF02018 Carbohydrate binding domain SIR_RS11130 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SIR_RS11135 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit SIR_RS11140 PF00440 Bacterial regulatory proteins, tetR family SIR_RS11145 PF01554 MatE SIR_RS11155 PF13787 SIR_RS11155 SIR_RS11160 PF02311 AraC-like ligand binding domain SIR_RS11160 PF12833 Helix-turn-helix domain SIR_RS11165 PF00232 Glycosyl hydrolase family 1 SIR_RS11185 PF07728 AAA domain (dynein-related subfamily) SIR_RS11190 PF10117 SIR_RS11190 SIR_RS11195 PF13302 Acetyltransferase (GNAT) domain SIR_RS11205 PF00072 Response regulator receiver domain SIR_RS11205 PF00486 Transcriptional regulatory protein, C terminal SIR_RS11210 PF00512 His Kinase A (phospho-acceptor) domain SIR_RS11210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SIR_RS11215 PF12730 SIR_RS11215 SIR_RS11220 PF00005 ABC transporter SIR_RS11225 PF00128 Alpha amylase, catalytic domain SIR_RS11225 PF16657 SIR_RS11225 SIR_RS11230 PF02361 Cobalt transport protein SIR_RS11235 PF00005 ABC transporter SIR_RS11240 PF09819 SIR_RS11240 SIR_RS11245 PF01717 Cobalamin-independent synthase, Catalytic domain SIR_RS11245 PF08267 Cobalamin-independent synthase, N-terminal domain SIR_RS11255 PF02611 CDP-diacylglycerol pyrophosphatase SIR_RS11260 PF00085 Thioredoxin SIR_RS11275 PF09992 Predicted periplasmic protein (DUF2233) SIR_RS11280 PF00535 Glycosyl transferase family 2 SIR_RS11280 PF04138 SIR_RS11280 SIR_RS11285 PF01250 Ribosomal protein S6 SIR_RS11290 PF00436 Single-strand binding protein family SIR_RS11295 PF01084 Ribosomal protein S18 SIR_RS11300 PF00583 Acetyltransferase (GNAT) family SIR_RS11305 PF06570 SIR_RS11305 SIR_RS11310 PF01544 CorA-like Mg2+ transporter protein SIR_RS11315 PF00005 ABC transporter SIR_RS11325 PF00557 Metallopeptidase family M24 SIR_RS11325 PF01321 Creatinase/Prolidase N-terminal domain SIR_RS11330 PF01132 Elongation factor P (EF-P) OB domain SIR_RS11330 PF08207 Elongation factor P (EF-P) KOW-like domain SIR_RS11330 PF09285 Elongation factor P, C-terminal SIR_RS11335 PF03780 SIR_RS11335 SIR_RS11340 PF01029 NusB family SIR_RS11420 PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase SIR_RS11425 PF07155 ECF-type riboflavin transporter, S component SIR_RS11435 PF01381 Helix-turn-helix SIR_RS11455 PF01048 Phosphorylase superfamily SIR_RS11460 PF00005 ABC transporter SIR_RS11460 PF12558 SIR_RS11460 SIR_RS11465 PF02361 Cobalt transport protein SIR_RS11470 PF00106 short chain dehydrogenase SIR_RS11475 PF01501 Glycosyl transferase family 8 SIR_RS11480 PF01501 Glycosyl transferase family 8 SIR_RS11485 PF02527 rRNA small subunit methyltransferase G SIR_RS11490 PF04011 LemA family SIR_RS11495 PF01435 Peptidase family M48 SIR_RS11505 PF02620 SIR_RS11505 SIR_RS11510 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain SIR_RS11510 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase SIR_RS11515 PF00072 Response regulator receiver domain SIR_RS11515 PF00486 Transcriptional regulatory protein, C terminal SIR_RS11520 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 SIR_RS11525 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 SIR_RS11525 PF00367 phosphotransferase system, EIIB SIR_RS11525 PF02378 Phosphotransferase system, EIIC SIR_RS11530 PF03372 Endonuclease/Exonuclease/phosphatase family SIR_RS11540 PF03477 ATP cone domain SIR_RS11545 PF07261 Replication initiation and membrane attachment SIR_RS11550 PF01695 IstB-like ATP binding protein SIR_RS11550 PF07319 Primosomal protein DnaI N-terminus SIR_RS11555 PF00881 Nitroreductase family SIR_RS11560 PF01926 50S ribosome-binding GTPase SIR_RS11560 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal SIR_RS11565 PF00176 SNF2 family N-terminal domain SIR_RS11565 PF00271 Helicase conserved C-terminal domain SIR_RS11565 PF08455 SIR_RS11565 SIR_RS11575 PF01225 Mur ligase family, catalytic domain SIR_RS11575 PF02875 Mur ligase family, glutamate ligase domain SIR_RS11575 PF08245 Mur ligase middle domain SIR_RS11580 PF13673 Acetyltransferase (GNAT) domain SIR_RS11585 PF13673 Acetyltransferase (GNAT) domain SIR_RS11590 PF02618 YceG-like family SIR_RS11595 PF01272 Transcription elongation factor, GreA/GreB, C-term SIR_RS11595 PF03449 Transcription elongation factor, N-terminal SIR_RS11600 PF00293 NUDIX domain SIR_RS11605 PF02096 60Kd inner membrane protein SIR_RS11610 PF00708 Acylphosphatase SIR_RS11615 PF00588 SpoU rRNA Methylase family SIR_RS11615 PF08032 RNA 2'-O ribose methyltransferase substrate binding SIR_RS11620 PF01966 HD domain SIR_RS11625 PF01027 Inhibitor of apoptosis-promoting Bax1 SIR_RS11630 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain SIR_RS11630 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain SIR_RS11635 PF03672 SIR_RS11635 SIR_RS11640 PF01177 Asp/Glu/Hydantoin racemase SIR_RS11645 PF01725 Ham1 family SIR_RS11650 PF12850 Calcineurin-like phosphoesterase superfamily domain SIR_RS11655 PF00571 CBS domain SIR_RS11660 PF00589 Phage integrase family SIR_RS11665 PF02616 ScpA/B protein SIR_RS11670 PF04079 Putative transcriptional regulators (Ypuh-like) SIR_RS11675 PF00849 RNA pseudouridylate synthase SIR_RS11675 PF01479 S4 domain SIR_RS11680 PF01809 SIR_RS11680 SIR_RS11685 PF02386 Cation transport protein SIR_RS11690 PF02080 TrkA-C domain SIR_RS11690 PF02254 TrkA-N domain SIR_RS11695 PF00588 SpoU rRNA Methylase family SIR_RS11700 PF12822 Protein of unknown function (DUF3816) SIR_RS11705 PF01569 PAP2 superfamily SIR_RS11710 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain SIR_RS11715 PF04055 Radical SAM superfamily SIR_RS11715 PF16199 SIR_RS11715 SIR_RS11720 PF06962 Putative rRNA methylase SIR_RS11730 PF00999 Sodium/hydrogen exchanger family SIR_RS11735 PF08860 Domain of unknown function (DUF1827) SIR_RS11740 PF00293 NUDIX domain SIR_RS11745 PF08279 HTH domain SIR_RS11745 PF13280 SIR_RS11745 SIR_RS11750 PF06445 GyrI-like small molecule binding domain SIR_RS11755 PF00004 ATPase family associated with various cellular activities (AAA) SIR_RS11755 PF02151 UvrB/uvrC motif SIR_RS11755 PF07724 AAA domain (Cdc48 subfamily) SIR_RS11755 PF10431 C-terminal, D2-small domain, of ClpB protein SIR_RS11760 PF08796 Protein of unknown function (DUF1797) SIR_RS11765 PF08020 Protein of unknown function (DUF1706) SIR_RS11775 PF02687 SIR_RS11775 SIR_RS11780 PF00005 ABC transporter SIR_RS11785 PF02687 SIR_RS11785 SIR_RS11790 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain SIR_RS11790 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain SIR_RS11795 PF01256 Carbohydrate kinase SIR_RS11800 PF00356 Bacterial regulatory proteins, lacI family SIR_RS11800 PF13377 Periplasmic binding protein-like domain SIR_RS11805 PF13416 Bacterial extracellular solute-binding protein SIR_RS11810 PF00528 Binding-protein-dependent transport system inner membrane component SIR_RS11815 PF00528 Binding-protein-dependent transport system inner membrane component SIR_RS11820 PF00251 Glycosyl hydrolases family 32 N-terminal domain SIR_RS11825 PF04775 Acyl-CoA thioester hydrolase/BAAT N-terminal region SIR_RS11825 PF08840 BAAT / Acyl-CoA thioester hydrolase C terminal SIR_RS11830 PF01047 MarR family SIR_RS11835 PF02601 SIR_RS11835 SIR_RS11835 PF13742 SIR_RS11835 SIR_RS11840 PF02609 Exonuclease VII small subunit SIR_RS11845 PF00348 Polyprenyl synthetase SIR_RS11850 PF01728 FtsJ-like methyltransferase SIR_RS11855 PF01316 Arginine repressor, DNA binding domain SIR_RS11855 PF02863 Arginine repressor, C-terminal domain SIR_RS11860 PF02463 RecF/RecN/SMC N terminal domain SIR_RS11865 PF00149 Calcineurin-like phosphoesterase SIR_RS11870 PF01497 Periplasmic binding protein SIR_RS11875 PF00005 ABC transporter SIR_RS11880 PF01032 FecCD transport family SIR_RS11885 PF01032 FecCD transport family SIR_RS11890 PF02645 Uncharacterised protein, DegV family COG1307 SIR_RS11895 PF00216 Bacterial DNA-binding protein SIR_RS11900 PF01475 Ferric uptake regulator family SIR_RS11905 PF00300 Histidine phosphatase superfamily (branch 1) SIR_RS11910 PF00905 Penicillin binding protein transpeptidase domain SIR_RS11910 PF03717 Penicillin-binding Protein dimerisation domain SIR_RS11915 PF02132 RecR protein SIR_RS11915 PF13662 Toprim domain SIR_RS11920 PF01820 D-ala D-ala ligase N-terminus SIR_RS11920 PF07478 D-ala D-ala ligase C-terminus SIR_RS11925 PF01225 Mur ligase family, catalytic domain SIR_RS11925 PF02875 Mur ligase family, glutamate ligase domain SIR_RS11925 PF08245 Mur ligase middle domain SIR_RS11930 PF08002 Protein of unknown function (DUF1697) SIR_RS11935 PF09529 SIR_RS11935 SIR_RS11940 PF09529 SIR_RS11940 SIR_RS11945 PF01381 Helix-turn-helix SIR_RS11955 PF00009 Elongation factor Tu GTP binding domain SIR_RS11955 PF03144 Elongation factor Tu domain 2 SIR_RS11955 PF16658 SIR_RS11955 SIR_RS11960 PF01544 CorA-like Mg2+ transporter protein SIR_RS11970 PF00270 DEAD/DEAH box helicase SIR_RS11970 PF00271 Helicase conserved C-terminal domain SIR_RS11975 PF01791 DeoC/LacD family aldolase SIR_RS11980 PF00455 SIR_RS11980 SIR_RS11980 PF08220 DeoR-like helix-turn-helix domain SIR_RS11985 PF02502 Ribose/Galactose Isomerase SIR_RS11990 PF02502 Ribose/Galactose Isomerase SIR_RS11995 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SIR_RS12000 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SIR_RS12005 PF03611 SIR_RS12005 SIR_RS12010 PF00294 pfkB family carbohydrate kinase SIR_RS12015 PF00703 Glycosyl hydrolases family 2 SIR_RS12015 PF00728 Glycosyl hydrolase family 20, catalytic domain SIR_RS12015 PF02836 Glycosyl hydrolases family 2, TIM barrel domain SIR_RS12015 PF02837 Glycosyl hydrolases family 2, sugar binding domain SIR_RS12015 PF07532 SIR_RS12015 SIR_RS12015 PF16355 SIR_RS12015 SIR_RS12020 PF00874 PRD domain SIR_RS12020 PF03123 CAT RNA binding domain SIR_RS12025 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit SIR_RS12030 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SIR_RS12030 PF02378 Phosphotransferase system, EIIC SIR_RS12035 PF00232 Glycosyl hydrolase family 1 SIR_RS12040 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family SIR_RS12045 PF01541 GIY-YIG catalytic domain SIR_RS12050 PF05175 Methyltransferase small domain SIR_RS12055 PF01197 Ribosomal protein L31 SIR_RS12060 PF01368 DHH family SIR_RS12060 PF02272 DHHA1 domain SIR_RS12065 PF00258 Flavodoxin SIR_RS12070 PF01458 Uncharacterized protein family (UPF0051) SIR_RS12075 PF01594 SIR_RS12075 SIR_RS12080 PF13181 Tetratricopeptide repeat SIR_RS12085 PF00205 Thiamine pyrophosphate enzyme, central domain SIR_RS12085 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SIR_RS12085 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SIR_RS12090 PF03306 Alpha-acetolactate decarboxylase SIR_RS12095 PF05670 SIR_RS12095 SIR_RS12095 PF05833 Fibronectin-binding protein A N-terminus (FbpA) SIR_RS12100 PF04392 ABC transporter substrate binding protein SIR_RS12105 PF02653 SIR_RS12105 SIR_RS12110 PF00005 ABC transporter SIR_RS12120 PF02229 Transcriptional Coactivator p15 (PC4) SIR_RS12155 PF00005 ABC transporter SIR_RS12155 PF13732 SIR_RS12155 SIR_RS12160 PF12698 ABC-2 family transporter protein SIR_RS12165 PF12705 PD-(D/E)XK nuclease superfamily SIR_RS12170 PF00580 UvrD/REP helicase N-terminal domain SIR_RS12170 PF12705 PD-(D/E)XK nuclease superfamily SIR_RS12170 PF13361 UvrD-like helicase C-terminal domain SIR_RS12175 PF00128 Alpha amylase, catalytic domain SIR_RS12175 PF02806 Alpha amylase, C-terminal all-beta domain SIR_RS12175 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) SIR_RS12180 PF00483 Nucleotidyl transferase SIR_RS12185 PF00483 Nucleotidyl transferase SIR_RS12190 PF00534 Glycosyl transferases group 1 SIR_RS12190 PF08323 Starch synthase catalytic domain SIR_RS12195 PF00343 Carbohydrate phosphorylase SIR_RS12200 PF00137 ATP synthase subunit C SIR_RS12205 PF00119 ATP synthase A chain SIR_RS12210 PF00430 ATP synthase B/B' CF(0) SIR_RS12215 PF00213 ATP synthase delta (OSCP) subunit SIR_RS12220 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SIR_RS12220 PF00306 ATP synthase alpha/beta chain, C terminal domain SIR_RS12220 PF02874 ATP synthase alpha/beta family, beta-barrel domain SIR_RS12225 PF00231 ATP synthase SIR_RS12230 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SIR_RS12230 PF02874 ATP synthase alpha/beta family, beta-barrel domain SIR_RS12235 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain SIR_RS12235 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain SIR_RS12240 PF05738 Cna protein B-type domain SIR_RS12240 PF13519 von Willebrand factor type A domain SIR_RS12245 PF00746 SIR_RS12245 SIR_RS12245 PF05738 Cna protein B-type domain SIR_RS12250 PF04203 Sortase family SIR_RS12255 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) SIR_RS12260 PF11772 SIR_RS12260 SIR_RS12265 PF01223 DNA/RNA non-specific endonuclease SIR_RS12270 PF00005 ABC transporter SIR_RS12270 PF00664 ABC transporter transmembrane region SIR_RS12275 PF00005 ABC transporter SIR_RS12275 PF00664 ABC transporter transmembrane region SIR_RS12280 PF02698 DUF218 domain SIR_RS12290 PF03788 SIR_RS12290 SIR_RS12295 PF04172 SIR_RS12295 SIR_RS12300 PF00156 Phosphoribosyl transferase domain SIR_RS12310 PF07261 Replication initiation and membrane attachment SIR_RS12310 PF13412 Winged helix-turn-helix DNA-binding SIR_RS12315 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain SIR_RS12315 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I SIR_RS12315 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II SIR_RS12315 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III SIR_RS12320 PF07992 Pyridine nucleotide-disulphide oxidoreductase SIR_RS12325 PF01433 Peptidase family M1 SIR_RS12325 PF11838 ERAP1-like C-terminal domain SIR_RS12330 PF00455 SIR_RS12330 SIR_RS12330 PF08220 DeoR-like helix-turn-helix domain SIR_RS12335 PF00294 pfkB family carbohydrate kinase SIR_RS12340 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SIR_RS12340 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SIR_RS12340 PF02378 Phosphotransferase system, EIIC SIR_RS12345 PF06619 Protein of unknown function (DUF1149) SIR_RS12350 PF02645 Uncharacterised protein, DegV family COG1307 SIR_RS12355 PF01113 Dihydrodipicolinate reductase, N-terminus SIR_RS12355 PF05173 Dihydrodipicolinate reductase, C-terminus SIR_RS12360 PF01743 Poly A polymerase head domain SIR_RS12360 PF12627 Probable RNA and SrmB- binding site of polymerase A SIR_RS12360 PF13735 tRNA nucleotidyltransferase domain 2 putative SIR_RS12365 PF00005 ABC transporter SIR_RS12365 PF12848 ABC transporter SIR_RS12365 PF16326 SIR_RS12365 SIR_RS12370 PF01409 tRNA synthetases class II core domain (F) SIR_RS12370 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain SIR_RS12375 PF00583 Acetyltransferase (GNAT) family SIR_RS12380 PF01588 Putative tRNA binding domain SIR_RS12380 PF03147 Ferredoxin-fold anticodon binding domain SIR_RS12380 PF03483 B3/4 domain SIR_RS12380 PF03484 tRNA synthetase B5 domain SIR_RS12385 PF02632 BioY family SIR_RS12390 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SIR_RS12390 PF07992 Pyridine nucleotide-disulphide oxidoreductase SIR_RS12400 PF01715 IPP transferase SIR_RS12405 PF01926 50S ribosome-binding GTPase SIR_RS12405 PF13167 SIR_RS12405 SIR_RS12405 PF16360 SIR_RS12405 SIR_RS12415 PF00753 Metallo-beta-lactamase superfamily SIR_RS12415 PF12706 Beta-lactamase superfamily domain SIR_RS12420 PF00300 Histidine phosphatase superfamily (branch 1) SIR_RS12425 PF00106 short chain dehydrogenase SIR_RS12430 PF08241 Methyltransferase domain SIR_RS12435 PF13673 Acetyltransferase (GNAT) domain SIR_RS12440 PF01368 DHH family SIR_RS12440 PF02272 DHHA1 domain SIR_RS12440 PF10141 SIR_RS12440 SIR_RS12445 PF00005 ABC transporter SIR_RS12450 PF00392 Bacterial regulatory proteins, gntR family SIR_RS12455 PF01336 OB-fold nucleic acid binding domain SIR_RS12455 PF02811 PHP domain SIR_RS12455 PF07733 Bacterial DNA polymerase III alpha subunit SIR_RS12455 PF14579 Helix-hairpin-helix motif SIR_RS12460 PF00365 Phosphofructokinase SIR_RS12465 PF00224 Pyruvate kinase, barrel domain SIR_RS12465 PF02887 Pyruvate kinase, alpha/beta domain SIR_RS12470 PF00717 Peptidase S24-like SIR_RS12480 PF01545 Cation efflux family SIR_RS12480 PF16916 SIR_RS12480 SIR_RS12485 PF00580 UvrD/REP helicase N-terminal domain SIR_RS12485 PF13361 UvrD-like helicase C-terminal domain SIR_RS12490 PF00293 NUDIX domain SIR_RS12495 PF00440 Bacterial regulatory proteins, tetR family SIR_RS12500 PF00005 ABC transporter SIR_RS12500 PF00664 ABC transporter transmembrane region SIR_RS12505 PF00005 ABC transporter SIR_RS12505 PF00664 ABC transporter transmembrane region SIR_RS12515 PF12697 Alpha/beta hydrolase family SIR_RS12520 PF09903 SIR_RS12520 SIR_RS12525 PF00583 Acetyltransferase (GNAT) family SIR_RS12535 PF01509 TruB family pseudouridylate synthase (N terminal domain) SIR_RS12535 PF16198 SIR_RS12535 SIR_RS12540 PF01687 Riboflavin kinase SIR_RS12540 PF06574 FAD synthetase SIR_RS12545 PF03960 ArsC family SIR_RS12550 PF05256 Uncharacterised protein family (UPF0223) SIR_RS12555 PF00459 Inositol monophosphatase family SIR_RS12560 PF01189 NOL1/NOP2/sun family SIR_RS12560 PF13636 pre-rRNA processing and ribosome biogenesis SIR_RS12560 PF17125 SIR_RS12560 SIR_RS12560 PF17126 SIR_RS12560 SIR_RS12565 PF12849 PBP superfamily domain SIR_RS12570 PF00528 Binding-protein-dependent transport system inner membrane component SIR_RS12575 PF00528 Binding-protein-dependent transport system inner membrane component SIR_RS12580 PF00005 ABC transporter SIR_RS12585 PF00005 ABC transporter SIR_RS12590 PF01895 PhoU domain SIR_RS12595 PF04002 RadC-like JAB domain SIR_RS12610 PF02629 CoA binding domain SIR_RS12610 PF06971 Putative DNA-binding protein N-terminus SIR_RS12615 PF08866 Putative amino acid metabolism SIR_RS12620 PF00266 Aminotransferase class-V SIR_RS12625 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase SIR_RS12625 PF14572 Phosphoribosyl synthetase-associated domain SIR_RS12630 PF01928 CYTH domain SIR_RS12635 PF04607 Region found in RelA / SpoT proteins SIR_RS12640 PF01513 ATP-NAD kinase SIR_RS12645 PF00849 RNA pseudouridylate synthase SIR_RS12650 PF01515 Phosphate acetyl/butaryl transferase SIR_RS12655 PF00633 Helix-hairpin-helix motif SIR_RS12655 PF00730 HhH-GPD superfamily base excision DNA repair protein SIR_RS12655 PF14815 NUDIX domain SIR_RS12660 PF00085 Thioredoxin SIR_RS12665 PF07799 SIR_RS12665 SIR_RS12670 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain SIR_RS12670 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I SIR_RS12670 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II SIR_RS12670 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III SIR_RS12675 PF12822 Protein of unknown function (DUF3816) SIR_RS12680 PF02441 Flavoprotein SIR_RS12685 PF04127 DNA / pantothenate metabolism flavoprotein SIR_RS12695 PF01268 Formate--tetrahydrofolate ligase SIR_RS12700 PF13420 Acetyltransferase (GNAT) domain SIR_RS12705 PF08713 DNA alkylation repair enzyme SIR_RS12710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SIR_RS12710 PF03466 LysR substrate binding domain SIR_RS12715 PF01381 Helix-turn-helix SIR_RS12720 PF00390 Malic enzyme, N-terminal domain SIR_RS12720 PF03949 Malic enzyme, NAD binding domain SIR_RS12725 PF03547 SIR_RS12725 SIR_RS12735 PF04738 SIR_RS12735 SIR_RS12735 PF14028 SIR_RS12735 SIR_RS12745 PF03358 NADPH-dependent FMN reductase SIR_RS12750 PF05147 Lanthionine synthetase C-like protein SIR_RS12755 PF00005 ABC transporter SIR_RS12760 PF02517 CAAX protease self-immunity SIR_RS12765 PF06912 SIR_RS12765 SIR_RS12770 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain SIR_RS12770 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain SIR_RS12775 PF07690 Major Facilitator Superfamily SIR_RS12780 PF09323 SIR_RS12780 SIR_RS12785 PF03773 SIR_RS12785 SIR_RS12790 PF00575 S1 RNA binding domain SIR_RS12790 PF09371 Tex-like protein N-terminal domain SIR_RS12790 PF12836 Helix-hairpin-helix motif SIR_RS12790 PF16921 SIR_RS12790 SIR_RS12795 PF10263 SIR_RS12795 SIR_RS12800 PF04024 SIR_RS12800 SIR_RS12805 PF00293 NUDIX domain SIR_RS12810 PF02603 HPr Serine kinase N terminus SIR_RS12810 PF07475 HPr Serine kinase C-terminal domain SIR_RS12815 PF01790 SIR_RS12815 SIR_RS12820 PF06103 SIR_RS12820 SIR_RS12825 PF12732 SIR_RS12825 SIR_RS12830 PF11674 SIR_RS12830 SIR_RS12835 PF01136 SIR_RS12835 SIR_RS12840 PF01136 SIR_RS12840 SIR_RS12840 PF16325 SIR_RS12840 SIR_RS12845 PF00753 Metallo-beta-lactamase superfamily SIR_RS12845 PF07521 RNA-metabolising metallo-beta-lactamase SIR_RS12850 PF00756 Putative esterase SIR_RS12855 PF00413 Matrixin SIR_RS12865 PF00005 ABC transporter SIR_RS12865 PF12848 ABC transporter SIR_RS12870 PF06305 SIR_RS12870 SIR_RS12875 PF07685 CobB/CobQ-like glutamine amidotransferase domain SIR_RS12880 PF08245 Mur ligase middle domain SIR_RS12880 PF08353 SIR_RS12880 SIR_RS12885 PF02457 DisA bacterial checkpoint controller nucleotide-binding SIR_RS12890 PF07949 YbbR-like protein SIR_RS12895 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain SIR_RS12895 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I SIR_RS12895 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II SIR_RS12895 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III SIR_RS12900 PF12710 haloacid dehalogenase-like hydrolase SIR_RS12905 PF02595 Glycerate kinase family SIR_RS12915 PF13459 4Fe-4S single cluster domain SIR_RS12925 PF02224 Cytidylate kinase SIR_RS12930 PF00707 Translation initiation factor IF-3, C-terminal domain SIR_RS12930 PF05198 Translation initiation factor IF-3, N-terminal domain SIR_RS12935 PF01632 Ribosomal protein L35 SIR_RS12940 PF00453 Ribosomal protein L20 SIR_RS12945 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SIR_RS12950 PF01522 Polysaccharide deacetylase SIR_RS12955 PF00270 DEAD/DEAH box helicase SIR_RS12955 PF00271 Helicase conserved C-terminal domain SIR_RS12960 PF01408 Oxidoreductase family, NAD-binding Rossmann fold SIR_RS12965 PF00485 Phosphoribulokinase / Uridine kinase family SIR_RS12970 PF01546 Peptidase family M20/M25/M40 SIR_RS12970 PF07687 Peptidase dimerisation domain SIR_RS12975 PF00762 Ferrochelatase SIR_RS12980 PF08282 haloacid dehalogenase-like hydrolase SIR_RS12985 PF00009 Elongation factor Tu GTP binding domain SIR_RS12985 PF00679 Elongation factor G C-terminus SIR_RS12985 PF03144 Elongation factor Tu domain 2 SIR_RS12985 PF06421 GTP-binding protein LepA C-terminus SIR_RS12990 PF01565 FAD binding domain SIR_RS12990 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain SIR_RS12995 PF00005 ABC transporter SIR_RS12995 PF08402 TOBE domain SIR_RS13000 PF00528 Binding-protein-dependent transport system inner membrane component SIR_RS13005 PF00528 Binding-protein-dependent transport system inner membrane component SIR_RS13010 PF13416 Bacterial extracellular solute-binding protein SIR_RS13015 PF01118 Semialdehyde dehydrogenase, NAD binding domain SIR_RS13015 PF02774 Semialdehyde dehydrogenase, dimerisation domain SIR_RS13020 PF00701 Dihydrodipicolinate synthetase family SIR_RS13030 PF06445 GyrI-like small molecule binding domain SIR_RS13030 PF12833 Helix-turn-helix domain SIR_RS13035 PF00466 Ribosomal protein L10 SIR_RS13040 PF00542 Ribosomal protein L7/L12 C-terminal domain SIR_RS13040 PF16320 SIR_RS13040 SIR_RS13045 PF04055 Radical SAM superfamily SIR_RS13045 PF13353 4Fe-4S single cluster domain SIR_RS13050 PF00005 ABC transporter SIR_RS13050 PF00664 ABC transporter transmembrane region SIR_RS13055 PF01782 RimM N-terminal domain SIR_RS13055 PF05239 PRC-barrel domain SIR_RS13060 PF01746 tRNA (Guanine-1)-methyltransferase SIR_RS13065 PF01297 Periplasmic solute binding protein family SIR_RS13070 PF04270 Streptococcal histidine triad protein SIR_RS13080 PF08241 Methyltransferase domain SIR_RS13085 PF13185 GAF domain SIR_RS13090 PF12169 DNA polymerase III subunits gamma and tau domain III SIR_RS13090 PF13177 DNA polymerase III, delta subunit SIR_RS13095 PF07722 Peptidase C26 SIR_RS13100 PF13520 Amino acid permease SIR_RS13105 PF01042 Endoribonuclease L-PSP SIR_RS13110 PF01053 Cys/Met metabolism PLP-dependent enzyme SIR_RS13115 PF01546 Peptidase family M20/M25/M40 SIR_RS13120 PF08348 SIR_RS13120 SIR_RS13120 PF13309 SIR_RS13120 SIR_RS13125 PF03458 SIR_RS13125 SIR_RS13130 PF11676 SIR_RS13130 SIR_RS13135 PF02237 Biotin protein ligase C terminal domain SIR_RS13135 PF03099 Biotin/lipoate A/B protein ligase family SIR_RS13135 PF08279 HTH domain SIR_RS13140 PF00356 Bacterial regulatory proteins, lacI family SIR_RS13140 PF13377 Periplasmic binding protein-like domain SIR_RS13145 PF00288 GHMP kinases N terminal domain SIR_RS13145 PF08544 GHMP kinases C terminal SIR_RS13145 PF10509 Galactokinase galactose-binding signature SIR_RS13150 PF13419 Haloacid dehalogenase-like hydrolase SIR_RS13155 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain SIR_RS13155 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain SIR_RS13160 PF01018 GTP1/OBG SIR_RS13160 PF01926 50S ribosome-binding GTPase SIR_RS13160 PF09269 Domain of unknown function (DUF1967) SIR_RS13170 PF01522 Polysaccharide deacetylase SIR_RS13175 PF00742 Homoserine dehydrogenase SIR_RS13175 PF03447 Homoserine dehydrogenase, NAD binding domain SIR_RS13180 PF00288 GHMP kinases N terminal domain SIR_RS13180 PF08544 GHMP kinases C terminal SIR_RS13195 PF06028 Alpha/beta hydrolase of unknown function (DUF915) SIR_RS13210 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) SIR_RS13210 PF04851 Type III restriction enzyme, res subunit SIR_RS13210 PF12008 Type I restriction and modification enzyme - subunit R C terminal SIR_RS13215 PF08878 SIR_RS13215 SIR_RS13220 PF00270 DEAD/DEAH box helicase SIR_RS13225 PF01420 Type I restriction modification DNA specificity domain SIR_RS13230 PF02661 Fic/DOC family SIR_RS13235 PF02384 N-6 DNA Methylase SIR_RS13235 PF12161 HsdM N-terminal domain SIR_RS13240 PF01420 Type I restriction modification DNA specificity domain SIR_RS13245 PF00589 Phage integrase family SIR_RS13250 PF01420 Type I restriction modification DNA specificity domain SIR_RS13270 PF07690 Major Facilitator Superfamily SIR_RS13275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SIR_RS13275 PF03466 LysR substrate binding domain SIR_RS13280 PF00175 Oxidoreductase NAD-binding domain SIR_RS13280 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B SIR_RS13285 PF01180 Dihydroorotate dehydrogenase SIR_RS13290 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family SIR_RS13300 PF00156 Phosphoribosyl transferase domain SIR_RS13305 PF06855 Protein of unknown function (DUF1250) SIR_RS13310 PF02562 PhoH-like protein SIR_RS13315 PF12636 SIR_RS13315 SIR_RS13320 PF13673 Acetyltransferase (GNAT) domain SIR_RS13325 PF04993 TfoX N-terminal domain SIR_RS13330 PF01262 Alanine dehydrogenase/PNT, C-terminal domain SIR_RS13330 PF05222 Alanine dehydrogenase/PNT, N-terminal domain SIR_RS13345 PF00005 ABC transporter SIR_RS13345 PF00664 ABC transporter transmembrane region SIR_RS13350 PF00005 ABC transporter SIR_RS13350 PF00664 ABC transporter transmembrane region SIR_RS13355 PF02130 Uncharacterized protein family UPF0054 SIR_RS13360 PF01219 Prokaryotic diacylglycerol kinase SIR_RS13365 PF01926 50S ribosome-binding GTPase SIR_RS13365 PF07650 KH domain SIR_RS13370 PF03772 SIR_RS13370 SIR_RS13375 PF00293 NUDIX domain SIR_RS13385 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain SIR_RS13385 PF06827 Zinc finger found in FPG and IleRS SIR_RS13385 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain SIR_RS13390 PF01121 Dephospho-CoA kinase SIR_RS13395 PF07690 Major Facilitator Superfamily SIR_RS13400 PF03840 Preprotein translocase SecG subunit SIR_RS13405 PF00575 S1 RNA binding domain SIR_RS13405 PF00773 RNB domain SIR_RS13405 PF08206 Ribonuclease B OB domain SIR_RS13410 PF01668 SmpB protein SIR_RS13415 PF10531 SLBB domain SIR_RS13415 PF12836 Helix-hairpin-helix motif SIR_RS13420 PF03772 SIR_RS13420 SIR_RS13420 PF13567 SIR_RS13420 SIR_RS13425 PF05656 SIR_RS13425 SIR_RS13430 PF01408 Oxidoreductase family, NAD-binding Rossmann fold SIR_RS13435 PF03167 Uracil DNA glycosylase superfamily SIR_RS13440 PF00293 NUDIX domain SIR_RS13445 PF01979 Amidohydrolase family SIR_RS13450 PF00438 S-adenosylmethionine synthetase, N-terminal domain SIR_RS13450 PF02772 S-adenosylmethionine synthetase, central domain SIR_RS13450 PF02773 S-adenosylmethionine synthetase, C-terminal domain SIR_RS13455 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) SIR_RS13460 PF13302 Acetyltransferase (GNAT) domain SIR_RS13465 PF00392 Bacterial regulatory proteins, gntR family SIR_RS13465 PF00571 CBS domain SIR_RS13465 PF03061 Thioesterase superfamily SIR_RS13465 PF07085 DRTGG domain SIR_RS13470 PF00557 Metallopeptidase family M24 SIR_RS13475 PF03631 SIR_RS13475 SIR_RS13480 PF01047 MarR family SIR_RS13485 PF03483 B3/4 domain SIR_RS13490 PF01527 Transposase SIR_RS13495 PF00665 Integrase core domain SIR_RS13500 PF04138 SIR_RS13500 SIR_RS13505 PF06177 SIR_RS13505 SIR_RS13510 PF13303 SIR_RS13510 SIR_RS13515 PF02558 Ketopantoate reductase PanE/ApbA SIR_RS13515 PF08546 Ketopantoate reductase PanE/ApbA C terminal SIR_RS13520 PF00533 BRCA1 C Terminus (BRCT) domain SIR_RS13520 PF01653 NAD-dependent DNA ligase adenylation domain SIR_RS13520 PF03119 NAD-dependent DNA ligase C4 zinc finger domain SIR_RS13520 PF03120 NAD-dependent DNA ligase OB-fold domain SIR_RS13520 PF12826 Helix-hairpin-helix motif SIR_RS13520 PF14520 Helix-hairpin-helix domain SIR_RS13525 PF00781 Diacylglycerol kinase catalytic domain SIR_RS13530 PF00128 Alpha amylase, catalytic domain SIR_RS13530 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) SIR_RS13530 PF03714 Bacterial pullanase-associated domain SIR_RS13535 PF00886 Ribosomal protein S16 SIR_RS13540 PF13083 KH domain SIR_RS13545 PF02829 3H domain SIR_RS13545 PF08279 HTH domain SIR_RS13550 PF07155 ECF-type riboflavin transporter, S component SIR_RS13555 PF13302 Acetyltransferase (GNAT) domain SIR_RS13560 PF03932 CutC family SIR_RS13565 PF04237 YjbR SIR_RS13570 PF00005 ABC transporter SIR_RS13570 PF00664 ABC transporter transmembrane region SIR_RS13575 PF00005 ABC transporter SIR_RS13575 PF00664 ABC transporter transmembrane region SIR_RS13580 PF00155 Aminotransferase class I and II SIR_RS13580 PF00392 Bacterial regulatory proteins, gntR family SIR_RS13585 PF13395 HNH endonuclease SIR_RS13590 PF01867 CRISPR associated protein Cas1 SIR_RS13595 PF09827 CRISPR associated protein Cas2 SIR_RS13600 PF16813 SIR_RS13600 SIR_RS13605 PF00188 Cysteine-rich secretory protein family SIR_RS13605 PF00746 SIR_RS13605 SIR_RS13610 PF03477 ATP cone domain SIR_RS13615 PF01165 Ribosomal protein S21 SIR_RS13620 PF01926 50S ribosome-binding GTPase SIR_RS13625 PF01351 Ribonuclease HII SIR_RS13630 PF00132 Bacterial transferase hexapeptide (six repeats) SIR_RS13630 PF12464 Maltose acetyltransferase SIR_RS13630 PF14602 Hexapeptide repeat of succinyl-transferase SIR_RS13635 PF02481 DNA recombination-mediator protein A SIR_RS13640 PF01131 DNA topoisomerase SIR_RS13640 PF01396 SIR_RS13640 SIR_RS13640 PF01751 Toprim domain SIR_RS13650 PF01134 Glucose inhibited division protein A SIR_RS13655 PF00756 Putative esterase SIR_RS13660 PF00756 Putative esterase SIR_RS13665 PF13535 ATP-grasp domain SIR_RS13670 PF00589 Phage integrase family SIR_RS13670 PF13495 Phage integrase, N-terminal SAM-like domain SIR_RS13675 PF00448 SRP54-type protein, GTPase domain SIR_RS13675 PF02881 SRP54-type protein, helical bundle domain SIR_RS13675 PF02978 Signal peptide binding domain SIR_RS13680 PF04297 Putative helix-turn-helix protein, YlxM / p13 like SIR_RS13685 PF00392 Bacterial regulatory proteins, gntR family SIR_RS13685 PF07702 UTRA domain SIR_RS13690 PF00117 Glutamine amidotransferase class-I SIR_RS13690 PF00958 GMP synthase C terminal domain SIR_RS13690 PF02540 NAD synthase SIR_RS13695 PF06028 Alpha/beta hydrolase of unknown function (DUF915) SIR_RS13700 PF13702 Lysozyme-like SIR_RS13705 PF04245 SIR_RS13705 SIR_RS13710 PF00464 Serine hydroxymethyltransferase SIR_RS13715 PF01300 Telomere recombination SIR_RS13720 PF05175 Methyltransferase small domain SIR_RS13725 PF00472 RF-1 domain SIR_RS13725 PF03462 PCRF domain SIR_RS13730 PF00265 Thymidine kinase SIR_RS13735 PF01361 Tautomerase enzyme SIR_RS13740 PF01554 MatE SIR_RS13745 PF00860 Permease family SIR_RS13750 PF00156 Phosphoribosyl transferase domain SIR_RS13755 PF00478 IMP dehydrogenase / GMP reductase domain SIR_RS13760 PF06889 SIR_RS13760 SIR_RS13770 PF00654 Voltage gated chloride channel SIR_RS13770 PF02080 TrkA-C domain SIR_RS13775 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SIR_RS13775 PF07992 Pyridine nucleotide-disulphide oxidoreductase SIR_RS13780 PF02424 ApbE family SIR_RS13785 PF03358 NADPH-dependent FMN reductase SIR_RS13790 PF03358 NADPH-dependent FMN reductase SIR_RS13790 PF13596 PAS domain SIR_RS13795 PF00005 ABC transporter SIR_RS13800 PF06182 SIR_RS13800 SIR_RS13805 PF06182 SIR_RS13805 SIR_RS13810 PF00672 HAMP domain SIR_RS13810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SIR_RS13810 PF02743 Cache domain SIR_RS13810 PF06580 SIR_RS13810 SIR_RS13815 PF00072 Response regulator receiver domain SIR_RS13815 PF12833 Helix-turn-helix domain SIR_RS13820 PF01625 Peptide methionine sulfoxide reductase SIR_RS13820 PF01641 SelR domain SIR_RS13825 PF08534 Redoxin SIR_RS13830 PF02683 SIR_RS13830 SIR_RS13835 PF05525 SIR_RS13835 SIR_RS13840 PF01883 Domain of unknown function DUF59 SIR_RS13845 PF00140 Sigma-70 factor, region 1 SIR_RS13845 PF03979 Sigma-70 factor, region 1 SIR_RS13845 PF04539 Sigma-70 region 3 SIR_RS13845 PF04542 Sigma-70 region 2 SIR_RS13845 PF04545 Sigma-70, region 4 SIR_RS13850 PF01807 CHC2 zinc finger SIR_RS13850 PF08275 DNA primase catalytic core, N-terminal domain SIR_RS13850 PF13155 Toprim-like SIR_RS13855 PF01741 Large-conductance mechanosensitive channel, MscL SIR_RS13860 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SIR_RS13860 PF07992 Pyridine nucleotide-disulphide oxidoreductase SIR_RS13865 PF04203 Sortase family SIR_RS13870 PF00521 DNA gyrase/topoisomerase IV, subunit A SIR_RS13870 PF03989 DNA gyrase C-terminal domain, beta-propeller SIR_RS13875 PF00056 lactate/malate dehydrogenase, NAD binding domain SIR_RS13875 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain SIR_RS13880 PF00293 NUDIX domain SIR_RS13890 PF00575 S1 RNA binding domain SIR_RS13905 PF11184 SIR_RS13905 SIR_RS13910 PF01063 Aminotransferase class IV SIR_RS13915 PF00521 DNA gyrase/topoisomerase IV, subunit A SIR_RS13915 PF03989 DNA gyrase C-terminal domain, beta-propeller SIR_RS13920 PF04439 Streptomycin adenylyltransferase SIR_RS13925 PF00204 DNA gyrase B SIR_RS13925 PF00986 DNA gyrase B subunit, carboxyl terminus SIR_RS13925 PF01751 Toprim domain SIR_RS13925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SIR_RS13930 PF02660 SIR_RS13930 SIR_RS13940 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region SIR_RS13945 PF00440 Bacterial regulatory proteins, tetR family SIR_RS13950 PF02645 Uncharacterised protein, DegV family COG1307 SIR_RS13955 PF11750 SIR_RS13955 SIR_RS13960 PF16264 SIR_RS13960 SIR_RS13965 PF02146 Sir2 family SIR_RS13970 PF00113 Enolase, C-terminal TIM barrel domain SIR_RS13970 PF03952 Enolase, N-terminal domain SIR_RS13980 PF07997 Protein of unknown function (DUF1694) SIR_RS14005 PF07690 Major Facilitator Superfamily SIR_RS14010 PF00152 tRNA synthetases class II (D, K and N) SIR_RS14010 PF01336 OB-fold nucleic acid binding domain SIR_RS14015 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SIR_RS14020 PF00155 Aminotransferase class I and II SIR_RS14030 PF01047 MarR family SIR_RS14035 PF03358 NADPH-dependent FMN reductase SIR_RS14040 PF03883 SIR_RS14040 SIR_RS14045 PF08876 SIR_RS14045 SIR_RS14050 PF03006 SIR_RS14050 SIR_RS14055 PF02653 SIR_RS14055 SIR_RS14060 PF02653 SIR_RS14060 SIR_RS14065 PF00005 ABC transporter SIR_RS14070 PF02608 Basic membrane protein SIR_RS14075 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region SIR_RS14080 PF01791 DeoC/LacD family aldolase SIR_RS14085 PF00591 Glycosyl transferase family, a/b domain SIR_RS14085 PF02885 Glycosyl transferase family, helical bundle domain SIR_RS14085 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain SIR_RS14090 PF05175 Methyltransferase small domain SIR_RS14095 PF00485 Phosphoribulokinase / Uridine kinase family SIR_RS14100 PF01649 Ribosomal protein S20 SIR_RS14110 PF00128 Alpha amylase, catalytic domain SIR_RS14110 PF09154 Domain of unknown function (DUF1939) SIR_RS14115 PF00512 His Kinase A (phospho-acceptor) domain SIR_RS14115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SIR_RS14120 PF00072 Response regulator receiver domain SIR_RS14120 PF00486 Transcriptional regulatory protein, C terminal SIR_RS14140 PF01245 Ribosomal protein L19 SIR_RS14145 PF00480 ROK family SIR_RS14150 PF02142 MGS-like domain SIR_RS14150 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain SIR_RS14150 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain SIR_RS14155 PF00117 Glutamine amidotransferase class-I SIR_RS14155 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain SIR_RS14160 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain SIR_RS14160 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain SIR_RS14165 PF00860 Permease family SIR_RS14170 PF00156 Phosphoribosyl transferase domain SIR_RS14175 PF04270 Streptococcal histidine triad protein SIR_RS14175 PF13516 Leucine Rich repeat SIR_RS14180 PF02650 WhiA C-terminal HTH domain SIR_RS14180 PF10298 WhiA N-terminal LAGLIDADG-like domain SIR_RS14180 PF14527 WhiA LAGLIDADG-like domain SIR_RS14185 PF01933 Uncharacterised protein family UPF0052 SIR_RS14190 PF03668 SIR_RS14190 SIR_RS14195 PF00334 Nucleoside diphosphate kinase SIR_RS14200 PF02517 CAAX protease self-immunity SIR_RS14205 PF07314 SIR_RS14205 SIR_RS14210 PF13242 HAD-hyrolase-like SIR_RS14210 PF13344 Haloacid dehalogenase-like hydrolase SIR_RS14215 PF00293 NUDIX domain SIR_RS14215 PF12535 Hydrolase of X-linked nucleoside diphosphate N terminal SIR_RS14220 PF01643 Acyl-ACP thioesterase SIR_RS14225 PF04055 Radical SAM superfamily SIR_RS14225 PF06969 HemN C-terminal domain SIR_RS14230 PF08002 Protein of unknown function (DUF1697) SIR_RS14245 PF00271 Helicase conserved C-terminal domain SIR_RS14245 PF02151 UvrB/uvrC motif SIR_RS14245 PF04851 Type III restriction enzyme, res subunit SIR_RS14245 PF12344 Ultra-violet resistance protein B SIR_RS14250 PF00497 Bacterial extracellular solute-binding proteins, family 3 SIR_RS14250 PF00528 Binding-protein-dependent transport system inner membrane component SIR_RS14255 PF00005 ABC transporter SIR_RS14260 PF00005 ABC transporter SIR_RS14265 PF00005 ABC transporter SIR_RS14265 PF00664 ABC transporter transmembrane region SIR_RS14270 PF00005 ABC transporter SIR_RS14270 PF00664 ABC transporter transmembrane region SIR_RS14275 PF01226 Formate/nitrite transporter SIR_RS14280 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase SIR_RS14285 PF01926 50S ribosome-binding GTPase SIR_RS14290 PF06689 ClpX C4-type zinc finger SIR_RS14290 PF07724 AAA domain (Cdc48 subfamily) SIR_RS14290 PF10431 C-terminal, D2-small domain, of ClpB protein SIR_RS14300 PF00186 Dihydrofolate reductase SIR_RS14305 PF00303 Thymidylate synthase SIR_RS14310 PF00654 Voltage gated chloride channel SIR_RS14315 PF01817 Chorismate mutase type II SIR_RS14330 PF03831 PhnA protein SIR_RS14330 PF08274 PhnA Zinc-Ribbon SIR_RS14335 PF01636 Phosphotransferase enzyme family SIR_RS14345 PF00849 RNA pseudouridylate synthase SIR_RS14345 PF01479 S4 domain SIR_RS14350 PF01252 SIR_RS14350 SIR_RS14355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SIR_RS14355 PF03466 LysR substrate binding domain SIR_RS14360 PF13508 Acetyltransferase (GNAT) domain SIR_RS14360 PF13673 Acetyltransferase (GNAT) domain SIR_RS14365 PF04073 Aminoacyl-tRNA editing domain SIR_RS14370 PF00581 Rhodanese-like domain SIR_RS14375 PF00581 Rhodanese-like domain SIR_RS14375 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SIR_RS14375 PF07992 Pyridine nucleotide-disulphide oxidoreductase SIR_RS14380 PF01016 Ribosomal L27 protein SIR_RS14385 PF04327 Protein of unknown function (DUF464) SIR_RS14390 PF00829 Ribosomal prokaryotic L21 protein SIR_RS14395 PF04191 Phospholipid methyltransferase SIR_RS14400 PF02568 Thiamine biosynthesis protein (ThiI) SIR_RS14400 PF02926 THUMP domain SIR_RS14405 PF00266 Aminotransferase class-V SIR_RS14410 PF06874 SIR_RS14410 SIR_RS14415 PF03618 SIR_RS14415 SIR_RS14420 PF00571 CBS domain SIR_RS14420 PF08279 HTH domain SIR_RS14425 PF00391 PEP-utilising enzyme, mobile domain SIR_RS14425 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain SIR_RS14425 PF02896 PEP-utilising enzyme, TIM barrel domain SIR_RS14435 PF00448 SRP54-type protein, GTPase domain SIR_RS14435 PF02881 SRP54-type protein, helical bundle domain SIR_RS14440 PF08282 haloacid dehalogenase-like hydrolase SIR_RS14445 PF08282 haloacid dehalogenase-like hydrolase SIR_RS14450 PF02463 RecF/RecN/SMC N terminal domain SIR_RS14450 PF06470 SMC proteins Flexible Hinge Domain SIR_RS14455 PF00035 Double-stranded RNA binding motif SIR_RS14455 PF14622 Ribonuclease-III-like SIR_RS14460 PF04304 SIR_RS14460 SIR_RS14465 PF00753 Metallo-beta-lactamase superfamily SIR_RS14470 PF00512 His Kinase A (phospho-acceptor) domain SIR_RS14470 PF00989 PAS fold SIR_RS14470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SIR_RS14475 PF00072 Response regulator receiver domain SIR_RS14475 PF00486 Transcriptional regulatory protein, C terminal SIR_RS14485 PF00534 Glycosyl transferases group 1 SIR_RS14485 PF13439 Glycosyltransferase Family 4 SIR_RS14490 PF00534 Glycosyl transferases group 1 SIR_RS14490 PF13439 Glycosyltransferase Family 4 SIR_RS14495 PF00356 Bacterial regulatory proteins, lacI family SIR_RS14495 PF13377 Periplasmic binding protein-like domain SIR_RS14500 PF00557 Metallopeptidase family M24 SIR_RS14500 PF01321 Creatinase/Prolidase N-terminal domain SIR_RS14505 PF08242 Methyltransferase domain SIR_RS14510 PF16363 SIR_RS14510 SIR_RS14515 PF16363 SIR_RS14515 SIR_RS14520 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase SIR_RS14525 PF00483 Nucleotidyl transferase SIR_RS14530 PF00293 NUDIX domain SIR_RS14535 PF01784 NIF3 (NGG1p interacting factor 3) SIR_RS14540 PF04816 Family of unknown function (DUF633) SIR_RS14545 PF00884 Sulfatase SIR_RS14550 PF05045 SIR_RS14550 SIR_RS14555 PF00005 ABC transporter SIR_RS14560 PF01061 SIR_RS14560 SIR_RS14565 PF00535 Glycosyl transferase family 2 SIR_RS14570 PF09314 SIR_RS14570 SIR_RS14575 PF00534 Glycosyl transferases group 1 SIR_RS14580 PF09913 SIR_RS14580 SIR_RS14585 PF00535 Glycosyl transferase family 2 SIR_RS14585 PF05045 SIR_RS14585 SIR_RS14585 PF13692 Glycosyl transferases group 1 SIR_RS14590 PF00535 Glycosyl transferase family 2 SIR_RS14595 PF10066 SIR_RS14595 SIR_RS14600 PF00535 Glycosyl transferase family 2 SIR_RS14605 PF01501 Glycosyl transferase family 8 SIR_RS14615 PF04321 RmlD substrate binding domain SIR_RS14625 PF00535 Glycosyl transferase family 2 SIR_RS14650 PF00005 ABC transporter SIR_RS14655 PF00512 His Kinase A (phospho-acceptor) domain SIR_RS14655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SIR_RS14660 PF00072 Response regulator receiver domain SIR_RS14660 PF00486 Transcriptional regulatory protein, C terminal SIR_RS14665 PF00082 Subtilase family SIR_RS14675 PF05147 Lanthionine synthetase C-like protein SIR_RS14680 PF00239 Resolvase, N terminal domain SIR_RS14680 PF07508 Recombinase SIR_RS14680 PF13408 Recombinase zinc beta ribbon domain SIR_RS14695 PF03575 Peptidase family S51 SIR_RS14700 PF08279 HTH domain SIR_RS14700 PF13280 SIR_RS14700 SIR_RS14705 PF01243 Pyridoxamine 5'-phosphate oxidase SIR_RS14710 PF05713 SIR_RS14710 SIR_RS14715 PF03432 SIR_RS14715 SIR_RS14720 PF00580 UvrD/REP helicase N-terminal domain SIR_RS14720 PF13538 UvrD-like helicase C-terminal domain SIR_RS14725 PF13175 AAA ATPase domain SIR_RS14730 PF13443 Cro/C1-type HTH DNA-binding domain SIR_RS14740 PF00271 Helicase conserved C-terminal domain SIR_RS14740 PF04851 Type III restriction enzyme, res subunit SIR_RS14745 PF04326 Divergent AAA domain SIR_RS14750 PF04014 Antidote-toxin recognition MazE SIR_RS14755 PF01131 DNA topoisomerase SIR_RS14755 PF01751 Toprim domain SIR_RS14760 PF14283 SIR_RS14760 SIR_RS14775 PF12846 AAA-like domain SIR_RS14780 PF12666 SIR_RS14780 SIR_RS14795 PF12750 SIR_RS14795 SIR_RS14815 PF02534 Type IV secretory system Conjugative DNA transfer SIR_RS14820 PF12687 SIR_RS14820 SIR_RS14825 PF01695 IstB-like ATP binding protein SIR_RS14830 PF06970 Replication initiator protein A (RepA) N-terminus SIR_RS14840 PF05958 tRNA (Uracil-5-)-methyltransferase SIR_RS14845 PF03816 Cell envelope-related transcriptional attenuator domain SIR_RS14850 PF00800 Prephenate dehydratase SIR_RS14855 PF01202 Shikimate kinase SIR_RS14860 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) SIR_RS14865 PF06133 Protein of unknown function (DUF964) SIR_RS14870 PF02153 Prephenate dehydrogenase SIR_RS14875 PF07843 SIR_RS14875 SIR_RS14880 PF01925 SIR_RS14880 SIR_RS14885 PF01264 Chorismate synthase SIR_RS14890 PF01761 3-dehydroquinate synthase SIR_RS14895 PF08501 Shikimate dehydrogenase substrate binding domain SIR_RS14900 PF01487 Type I 3-dehydroquinase SIR_RS14905 PF10672 S-adenosylmethionine-dependent methyltransferase SIR_RS14910 PF00884 Sulfatase SIR_RS14915 PF09659 SIR_RS14915 SIR_RS14920 PF01048 Phosphorylase superfamily SIR_RS14925 PF01048 Phosphorylase superfamily SIR_RS14930 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) SIR_RS14935 PF01926 50S ribosome-binding GTPase SIR_RS14935 PF10396 GTP-binding protein TrmE N-terminus SIR_RS14935 PF12631 Catalytic cysteine-containing C-terminus of GTPase, MnmE SIR_RS14940 PF01610 SIR_RS14940 SIR_RS14945 PF02517 CAAX protease self-immunity SIR_RS14950 PF01183 Glycosyl hydrolases family 25 SIR_RS14950 PF08481 SIR_RS14950 SIR_RS14955 PF00121 Triosephosphate isomerase SIR_RS14960 PF00009 Elongation factor Tu GTP binding domain SIR_RS14960 PF03143 Elongation factor Tu C-terminal domain SIR_RS14960 PF03144 Elongation factor Tu domain 2 SIR_RS14965 PF13791 SIR_RS14965 SIR_RS14970 PF04542 Sigma-70 region 2 SIR_RS14970 PF08281 Sigma-70, region 4 SIR_RS14975 PF00311 Phosphoenolpyruvate carboxylase SIR_RS14980 PF01098 SIR_RS14980 SIR_RS14985 PF01183 Glycosyl hydrolases family 25 SIR_RS14995 PF00005 ABC transporter SIR_RS15000 PF00528 Binding-protein-dependent transport system inner membrane component SIR_RS15000 PF04069 Substrate binding domain of ABC-type glycine betaine transport system SIR_RS15005 PF01047 MarR family SIR_RS15010 PF03167 Uracil DNA glycosylase superfamily SIR_RS15020 PF01546 Peptidase family M20/M25/M40 SIR_RS15025 PF00881 Nitroreductase family SIR_RS15030 PF01541 GIY-YIG catalytic domain SIR_RS15030 PF02151 UvrB/uvrC motif SIR_RS15030 PF08459 UvrC Helix-hairpin-helix N-terminal SIR_RS15030 PF14520 Helix-hairpin-helix domain SIR_RS15035 PF00391 PEP-utilising enzyme, mobile domain SIR_RS15035 PF02896 PEP-utilising enzyme, TIM barrel domain SIR_RS15035 PF05524 PEP-utilising enzyme, N-terminal SIR_RS15040 PF00381 PTS HPr component phosphorylation site SIR_RS15045 PF00462 Glutaredoxin SIR_RS15050 PF00317 Ribonucleotide reductase, all-alpha domain SIR_RS15050 PF02867 Ribonucleotide reductase, barrel domain SIR_RS15050 PF08343 Ribonucleotide reductase N-terminal SIR_RS15055 PF12680 SnoaL-like domain SIR_RS15060 PF00268 Ribonucleotide reductase, small chain SIR_RS15065 PF02517 CAAX protease self-immunity SIR_RS15075 PF03577 SIR_RS15075 SIR_RS15080 PF01965 DJ-1/PfpI family SIR_RS15085 PF01553 Acyltransferase SIR_RS15090 PF00122 E1-E2 ATPase SIR_RS15090 PF00702 haloacid dehalogenase-like hydrolase SIR_RS15095 PF04018 SIR_RS15095 SIR_RS15100 PF04073 Aminoacyl-tRNA editing domain SIR_RS15105 PF00300 Histidine phosphatase superfamily (branch 1) SIR_RS15110 PF00152 tRNA synthetases class II (D, K and N) SIR_RS15110 PF01336 OB-fold nucleic acid binding domain SIR_RS15115 PF04993 TfoX N-terminal domain SIR_RS15120 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SIR_RS15125 PF12146 Putative lysophospholipase SIR_RS15145 PF04229 GrpB protein SIR_RS15150 PF00072 Response regulator receiver domain SIR_RS15150 PF12833 Helix-turn-helix domain SIR_RS15155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SIR_RS15155 PF06580 SIR_RS15155 SIR_RS15160 PF04854 SIR_RS15160 SIR_RS15165 PF12010 SIR_RS15165 SIR_RS15165 PF13416 Bacterial extracellular solute-binding protein SIR_RS15170 PF00528 Binding-protein-dependent transport system inner membrane component SIR_RS15175 PF00528 Binding-protein-dependent transport system inner membrane component SIR_RS15180 PF00728 Glycosyl hydrolase family 20, catalytic domain SIR_RS15185 PF00480 ROK family SIR_RS15190 PF01074 Glycosyl hydrolases family 38 N-terminal domain SIR_RS15190 PF09261 Alpha mannosidase, middle domain SIR_RS15195 PF06824 Protein of unknown function (DUF1237) SIR_RS15200 PF07971 Glycosyl hydrolase family 92 SIR_RS15205 PF03644 Glycosyl hydrolase family 85 SIR_RS15240 PF00465 Iron-containing alcohol dehydrogenase SIR_RS15245 PF00923 Transaldolase SIR_RS15250 PF01228 Glycine radical SIR_RS15250 PF02901 Pyruvate formate lyase SIR_RS15255 PF02378 Phosphotransferase system, EIIC SIR_RS15260 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SIR_RS15265 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit SIR_RS15270 PF04198 Putative sugar-binding domain SIR_RS15270 PF13412 Winged helix-turn-helix DNA-binding SIR_RS15275 PF00455 SIR_RS15275 SIR_RS15275 PF08220 DeoR-like helix-turn-helix domain SIR_RS15280 PF04055 Radical SAM superfamily SIR_RS15280 PF13353 4Fe-4S single cluster domain SIR_RS15285 PF12850 Calcineurin-like phosphoesterase superfamily domain SIR_RS15290 PF02687 SIR_RS15290 SIR_RS15295 PF00005 ABC transporter SIR_RS15300 PF00440 Bacterial regulatory proteins, tetR family SIR_RS15305 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SIR_RS15305 PF02824 TGS domain SIR_RS15305 PF03129 Anticodon binding domain SIR_RS15305 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain SIR_RS15315 PF00512 His Kinase A (phospho-acceptor) domain SIR_RS15315 PF00672 HAMP domain SIR_RS15315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SIR_RS15320 PF00072 Response regulator receiver domain SIR_RS15320 PF00486 Transcriptional regulatory protein, C terminal SIR_RS15325 PF10282 Lactonase, 7-bladed beta-propeller SIR_RS15330 PF06160 SIR_RS15330 SIR_RS15335 PF00204 DNA gyrase B SIR_RS15335 PF00986 DNA gyrase B subunit, carboxyl terminus SIR_RS15335 PF01751 Toprim domain SIR_RS15335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SIR_RS15340 PF13419 Haloacid dehalogenase-like hydrolase SIR_RS15345 PF01965 DJ-1/PfpI family SIR_RS15350 PF01098 SIR_RS15350 SIR_RS15355 PF03601 SIR_RS15355 SIR_RS15360 PF00270 DEAD/DEAH box helicase SIR_RS15360 PF00929 Exonuclease SIR_RS15360 PF13307 Helicase C-terminal domain SIR_RS15365 PF00753 Metallo-beta-lactamase superfamily SIR_RS15370 PF02687 SIR_RS15370 SIR_RS15375 PF00005 ABC transporter SIR_RS15380 PF00472 RF-1 domain SIR_RS15380 PF03462 PCRF domain SIR_RS15385 PF10978 SIR_RS15385 SIR_RS15390 PF00122 E1-E2 ATPase SIR_RS15390 PF00689 Cation transporting ATPase, C-terminus SIR_RS15390 PF00690 Cation transporter/ATPase, N-terminus SIR_RS15390 PF00702 haloacid dehalogenase-like hydrolase SIR_RS15395 PF09148 Domain of unknown function (DUF1934) SIR_RS15400 PF01966 HD domain SIR_RS15405 PF08282 haloacid dehalogenase-like hydrolase SIR_RS15410 PF02388 FemAB family SIR_RS15415 PF02388 FemAB family SIR_RS15420 PF00005 ABC transporter SIR_RS15420 PF00664 ABC transporter transmembrane region SIR_RS15425 PF01411 tRNA synthetases class II (A) SIR_RS15425 PF02272 DHHA1 domain SIR_RS15425 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain SIR_RS15430 PF04525 Tubby C 2 SIR_RS15435 PF13145 PPIC-type PPIASE domain SIR_RS15440 PF01596 O-methyltransferase SIR_RS15445 PF01432 Peptidase family M3 SIR_RS15445 PF08439 Oligopeptidase F SIR_RS15450 PF06054 SIR_RS15450 SIR_RS15455 PF02378 Phosphotransferase system, EIIC SIR_RS15465 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit SIR_RS15470 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SIR_RS15470 PF00874 PRD domain SIR_RS15470 PF05043 Mga helix-turn-helix domain SIR_RS15470 PF08279 HTH domain SIR_RS15475 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SIR_RS15480 PF04193 PQ loop repeat SIR_RS15485 PF00232 Glycosyl hydrolase family 1 SIR_RS15490 PF07690 Major Facilitator Superfamily SIR_RS15495 PF00768 D-alanyl-D-alanine carboxypeptidase SIR_RS15495 PF09211 Domain of unknown function (DUF1958) SIR_RS15500 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase SIR_RS15505 PF02547 Queuosine biosynthesis protein SIR_RS15510 PF01316 Arginine repressor, DNA binding domain SIR_RS15510 PF02863 Arginine repressor, C-terminal domain SIR_RS15515 PF01546 Peptidase family M20/M25/M40 SIR_RS15520 PF03606 SIR_RS15520 SIR_RS15525 PF00696 Amino acid kinase family SIR_RS15530 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain SIR_RS15530 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain SIR_RS15535 PF02274 Amidinotransferase SIR_RS15540 PF00027 Cyclic nucleotide-binding domain SIR_RS15540 PF13545 Crp-like helix-turn-helix domain SIR_RS15545 PF13354 Beta-lactamase enzyme family SIR_RS15555 PF10439 SIR_RS15555 SIR_RS15565 PF08951 Enterocin A Immunity SIR_RS15580 PF10439 SIR_RS15580 SIR_RS15590 PF10439 SIR_RS15590 SIR_RS15600 PF02517 CAAX protease self-immunity SIR_RS15605 PF00072 Response regulator receiver domain SIR_RS15605 PF04397 LytTr DNA-binding domain SIR_RS15610 PF14501 GHKL domain SIR_RS15615 PF03047 SIR_RS15615 SIR_RS15620 PF13437 HlyD family secretion protein SIR_RS15625 PF00005 ABC transporter SIR_RS15625 PF00664 ABC transporter transmembrane region SIR_RS15625 PF03412 Peptidase C39 family SIR_RS15635 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain SIR_RS15635 PF02777 Iron/manganese superoxide dismutases, C-terminal domain SIR_RS15640 PF06144 DNA polymerase III, delta subunit SIR_RS15645 PF13509 S1 domain SIR_RS15650 PF01765 Ribosome recycling factor SIR_RS15655 PF00696 Amino acid kinase family SIR_RS15660 PF00687 Ribosomal protein L1p/L10e family SIR_RS15665 PF00298 Ribosomal protein L11, RNA binding domain SIR_RS15665 PF03946 Ribosomal protein L11, N-terminal domain SIR_RS15670 PF11877 SIR_RS15670 SIR_RS15675 PF00122 E1-E2 ATPase SIR_RS15675 PF00690 Cation transporter/ATPase, N-terminus SIR_RS15675 PF00702 haloacid dehalogenase-like hydrolase SIR_RS15680 PF01580 FtsK/SpoIIIE family SIR_RS15680 PF09397 Ftsk gamma domain SIR_RS15685 PF04024 SIR_RS15685 SIR_RS15695 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD SIR_RS15700 PF17032 SIR_RS15700 SIR_RS15705 PF00005 ABC transporter SIR_RS15705 PF12848 ABC transporter SIR_RS15710 PF05987 SIR_RS15710 SIR_RS15715 PF01048 Phosphorylase superfamily SIR_RS15725 PF00293 NUDIX domain SIR_RS15730 PF00132 Bacterial transferase hexapeptide (six repeats) SIR_RS15730 PF12804 MobA-like NTP transferase domain SIR_RS15730 PF14602 Hexapeptide repeat of succinyl-transferase SIR_RS15735 PF04266 ASCH domain SIR_RS15750 PF12746 GNAT acetyltransferase SIR_RS15755 PF13561 Enoyl-(Acyl carrier protein) reductase SIR_RS15760 PF11195 SIR_RS15760 SIR_RS15765 PF00313 'Cold-shock' DNA-binding domain SIR_RS15770 PF02502 Ribose/Galactose Isomerase SIR_RS15775 PF00583 Acetyltransferase (GNAT) family SIR_RS15780 PF00583 Acetyltransferase (GNAT) family SIR_RS15785 PF13520 Amino acid permease SIR_RS15790 PF02687 SIR_RS15790 SIR_RS15795 PF00005 ABC transporter SIR_RS15805 PF11457 SIR_RS15805 SIR_RS15810 PF04397 LytTr DNA-binding domain SIR_RS15815 PF01061 SIR_RS15815 SIR_RS15820 PF00005 ABC transporter SIR_RS15825 PF02687 SIR_RS15825 SIR_RS15830 PF00005 ABC transporter SIR_RS15835 PF05857 SIR_RS15835 SIR_RS15840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SIR_RS15845 PF00072 Response regulator receiver domain SIR_RS15845 PF00486 Transcriptional regulatory protein, C terminal SIR_RS15850 PF11187 Protein of unknown function (DUF2974) SIR_RS15855 PF01588 Putative tRNA binding domain SIR_RS15855 PF09334 tRNA synthetases class I (M) SIR_RS15860 PF03083 Sugar efflux transporter for intercellular exchange SIR_RS15865 PF04239 Protein of unknown function (DUF421) SIR_RS15870 PF11694 SIR_RS15870 SIR_RS15875 PF07853 SIR_RS15875 SIR_RS15875 PF13630 SIR_RS15875 SIR_RS15880 PF12840 Helix-turn-helix domain SIR_RS15885 PF02517 CAAX protease self-immunity SIR_RS15895 PF03372 Endonuclease/Exonuclease/phosphatase family SIR_RS15900 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SIR_RS15905 PF00633 Helix-hairpin-helix motif SIR_RS15905 PF00730 HhH-GPD superfamily base excision DNA repair protein SIR_RS15910 PF00462 Glutaredoxin SIR_RS15910 PF03960 ArsC family SIR_RS15915 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain SIR_RS15920 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases SIR_RS15925 PF06156 SIR_RS15925 SIR_RS15930 PF13177 DNA polymerase III, delta subunit SIR_RS15935 PF02223 Thymidylate kinase SIR_RS15940 PF02588 SIR_RS15940 SIR_RS15940 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) SIR_RS15945 PF00571 CBS domain SIR_RS15950 PF00005 ABC transporter SIR_RS15955 PF00005 ABC transporter SIR_RS15955 PF12399 Branched-chain amino acid ATP-binding cassette transporter SIR_RS15960 PF02653 SIR_RS15960 SIR_RS15965 PF02653 SIR_RS15965 SIR_RS15970 PF13458 Periplasmic binding protein SIR_RS15975 PF09902 SIR_RS15975 SIR_RS15980 PF00574 Clp protease SIR_RS15985 PF14681 Uracil phosphoribosyltransferase SIR_RS15990 PF00122 E1-E2 ATPase SIR_RS15990 PF00689 Cation transporting ATPase, C-terminus SIR_RS15990 PF00690 Cation transporter/ATPase, N-terminus SIR_RS15990 PF00702 haloacid dehalogenase-like hydrolase SIR_RS15995 PF00155 Aminotransferase class I and II SIR_RS16000 PF01943 SIR_RS16000 SIR_RS16000 PF14667 Polysaccharide biosynthesis C-terminal domain SIR_RS16005 PF02875 Mur ligase family, glutamate ligase domain SIR_RS16005 PF08245 Mur ligase middle domain SIR_RS16010 PF02517 CAAX protease self-immunity SIR_RS16015 PF08820 SIR_RS16015 SIR_RS16020 PF05708 Orthopoxvirus protein of unknown function (DUF830) SIR_RS16025 PF01368 DHH family SIR_RS16025 PF02833 DHHA2 domain SIR_RS16030 PF04055 Radical SAM superfamily SIR_RS16030 PF13353 4Fe-4S single cluster domain SIR_RS16035 PF03372 Endonuclease/Exonuclease/phosphatase family SIR_RS16040 PF00128 Alpha amylase, catalytic domain SIR_RS16040 PF16657 SIR_RS16040 SIR_RS16045 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 SIR_RS16045 PF00367 phosphotransferase system, EIIB SIR_RS16045 PF02378 Phosphotransferase system, EIIC SIR_RS16050 PF00392 Bacterial regulatory proteins, gntR family SIR_RS16050 PF07702 UTRA domain SIR_RS16055 PF00571 CBS domain SIR_RS16055 PF01595 SIR_RS16055 SIR_RS16055 PF03471 Transporter associated domain SIR_RS16060 PF01293 Phosphoenolpyruvate carboxykinase SIR_RS16065 PF01594 SIR_RS16065 SIR_RS16070 PF00133 tRNA synthetases class I (I, L, M and V) SIR_RS16070 PF06827 Zinc finger found in FPG and IleRS SIR_RS16070 PF08264 Anticodon-binding domain of tRNA SIR_RS16075 PF05103 DivIVA protein SIR_RS16080 PF01479 S4 domain SIR_RS16085 PF02325 SIR_RS16085 SIR_RS16090 PF04472 Protein of unknown function (DUF552) SIR_RS16095 PF01168 Alanine racemase, N-terminal domain SIR_RS16100 PF00091 Tubulin/FtsZ family, GTPase domain SIR_RS16100 PF12327 FtsZ family, C-terminal domain SIR_RS16105 PF02491 SHS2 domain inserted in FTSA SIR_RS16105 PF11983 SIR_RS16105 SIR_RS16105 PF14450 Cell division protein FtsA SIR_RS16110 PF03799 Cell division protein FtsQ SIR_RS16110 PF08478 POTRA domain, FtsQ-type SIR_RS16115 PF03033 Glycosyltransferase family 28 N-terminal domain SIR_RS16115 PF04101 Glycosyltransferase family 28 C-terminal domain SIR_RS16120 PF02875 Mur ligase family, glutamate ligase domain SIR_RS16120 PF08245 Mur ligase middle domain SIR_RS16125 PF11364 SIR_RS16125 SIR_RS16130 PF00009 Elongation factor Tu GTP binding domain SIR_RS16130 PF00679 Elongation factor G C-terminus SIR_RS16130 PF03144 Elongation factor Tu domain 2 SIR_RS16130 PF14492 Elongation Factor G, domain II SIR_RS16135 PF00849 RNA pseudouridylate synthase SIR_RS16140 PF00581 Rhodanese-like domain SIR_RS16145 PF06014 Bacterial protein of unknown function (DUF910) SIR_RS16150 PF00210 Ferritin-like domain SIR_RS16155 PF06750 SIR_RS16155 SIR_RS16160 PF04892 SIR_RS16160 SIR_RS16165 PF04055 Radical SAM superfamily SIR_RS16165 PF13394 4Fe-4S single cluster domain SIR_RS16170 PF06265 Protein of unknown function (DUF1027) SIR_RS16175 PF05362 Lon protease (S16) C-terminal proteolytic domain SIR_RS16175 PF13180 PDZ domain SIR_RS16180 PF01467 Cytidylyltransferase SIR_RS16185 PF03602 Conserved hypothetical protein 95 SIR_RS16190 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein SIR_RS16190 PF16321 SIR_RS16190 SIR_RS16200 PF00270 DEAD/DEAH box helicase SIR_RS16200 PF00271 Helicase conserved C-terminal domain SIR_RS16205 PF01205 Uncharacterized protein family UPF0029 SIR_RS16205 PF09186 Domain of unknown function (DUF1949) SIR_RS16210 PF00291 Pyridoxal-phosphate dependent enzyme SIR_RS16240 PF00133 tRNA synthetases class I (I, L, M and V) SIR_RS16240 PF08264 Anticodon-binding domain of tRNA SIR_RS16240 PF10458 Valyl tRNA synthetase tRNA binding arm SIR_RS16250 PF13302 Acetyltransferase (GNAT) domain SIR_RS16265 PF08930 Domain of unknown function (DUF1912) SIR_RS16270 PF01814 Hemerythrin HHE cation binding domain SIR_RS16270 PF04282 SIR_RS16270 SIR_RS16270 PF13596 PAS domain SIR_RS16275 PF08984 Domain of unknown function (DUF1858) SIR_RS16280 PF01938 TRAM domain SIR_RS16280 PF05958 tRNA (Uracil-5-)-methyltransferase SIR_RS16285 PF01636 Phosphotransferase enzyme family SIR_RS16290 PF02631 RecX family SIR_RS16295 PF04167 Protein of unknown function (DUF402) SIR_RS16300 PF06124 Staphylococcal protein of unknown function (DUF960) SIR_RS16305 PF00575 S1 RNA binding domain SIR_RS16310 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD SIR_RS16310 PF08282 haloacid dehalogenase-like hydrolase SIR_RS16315 PF00072 Response regulator receiver domain SIR_RS16315 PF00196 Bacterial regulatory proteins, luxR family SIR_RS16320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SIR_RS16320 PF07730 Histidine kinase SIR_RS16325 PF09922 Cell wall-active antibiotics response protein (DUF2154) SIR_RS16330 PF00069 Protein kinase domain SIR_RS16330 PF03793 PASTA domain SIR_RS16335 PF13672 Protein phosphatase 2C SIR_RS16340 PF01029 NusB family SIR_RS16340 PF01189 NOL1/NOP2/sun family SIR_RS16345 PF00551 Formyl transferase SIR_RS16345 PF02911 Formyl transferase, C-terminal domain SIR_RS16350 PF00271 Helicase conserved C-terminal domain SIR_RS16350 PF04851 Type III restriction enzyme, res subunit SIR_RS16355 PF01192 RNA polymerase Rpb6 SIR_RS16360 PF00625 Guanylate kinase SIR_RS16365 PF00013 KH domain SIR_RS16365 PF01966 HD domain SIR_RS16365 PF12072 SIR_RS16365 SIR_RS16370 PF10543 SIR_RS16370 SIR_RS16375 PF00239 Resolvase, N terminal domain SIR_RS16375 PF07508 Recombinase SIR_RS16375 PF13408 Recombinase zinc beta ribbon domain SIR_RS16380 PF00239 Resolvase, N terminal domain SIR_RS16380 PF07508 Recombinase SIR_RS16380 PF13408 Recombinase zinc beta ribbon domain SIR_RS16385 PF00239 Resolvase, N terminal domain SIR_RS16385 PF07508 Recombinase SIR_RS16385 PF13408 Recombinase zinc beta ribbon domain SIR_RS16385 PF14287 SIR_RS16385 SIR_RS16415 PF04055 Radical SAM superfamily SIR_RS16415 PF13353 4Fe-4S single cluster domain SIR_RS16420 PF11420 Bacteriocin subtilosin A SIR_RS16425 PF01381 Helix-turn-helix SIR_RS16435 PF00005 ABC transporter SIR_RS16440 PF04055 Radical SAM superfamily SIR_RS16440 PF13353 4Fe-4S single cluster domain SIR_RS16445 PF11420 Bacteriocin subtilosin A SIR_RS16450 PF05713 SIR_RS16450 SIR_RS16455 PF03432 SIR_RS16455 SIR_RS16465 PF00271 Helicase conserved C-terminal domain SIR_RS16465 PF04851 Type III restriction enzyme, res subunit SIR_RS16470 PF01548 SIR_RS16470 SIR_RS16470 PF02371 SIR_RS16470 SIR_RS16475 PF01131 DNA topoisomerase SIR_RS16475 PF01751 Toprim domain SIR_RS16480 PF14283 SIR_RS16480 SIR_RS16490 PF00877 NlpC/P60 family SIR_RS16495 PF12846 AAA-like domain SIR_RS16500 PF12666 SIR_RS16500 SIR_RS16515 PF12750 SIR_RS16515 SIR_RS16530 PF02534 Type IV secretory system Conjugative DNA transfer SIR_RS16535 PF02498 SIR_RS16535 SIR_RS16535 PF03374 SIR_RS16535 SIR_RS16540 PF12687 SIR_RS16540 SIR_RS16545 PF01695 IstB-like ATP binding protein SIR_RS16550 PF06970 Replication initiator protein A (RepA) N-terminus SIR_RS16560 PF07992 Pyridine nucleotide-disulphide oxidoreductase SIR_RS16560 PF13192 Thioredoxin domain SIR_RS16565 PF00578 AhpC/TSA family SIR_RS16565 PF10417 C-terminal domain of 1-Cys peroxiredoxin SIR_RS16575 PF01170 Putative RNA methylase family UPF0020 SIR_RS16575 PF02926 THUMP domain SIR_RS16580 PF05103 DivIVA protein SIR_RS16585 PF06908 Protein of unknown function (DUF1273) SIR_RS16590 PF03838 Recombination protein U SIR_RS16595 PF00905 Penicillin binding protein transpeptidase domain SIR_RS16595 PF00912 Transglycosylase SIR_RS16600 PF03051 Peptidase C1-like family SIR_RS16605 PF02540 NAD synthase SIR_RS16610 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family SIR_RS16625 PF00324 Amino acid permease SIR_RS16630 PF07992 Pyridine nucleotide-disulphide oxidoreductase SIR_RS16635 PF13268 SIR_RS16635 SIR_RS16640 PF00005 ABC transporter SIR_RS16645 PF00528 Binding-protein-dependent transport system inner membrane component SIR_RS16650 PF00270 DEAD/DEAH box helicase SIR_RS16650 PF00271 Helicase conserved C-terminal domain SIR_RS16655 PF00768 D-alanyl-D-alanine carboxypeptidase SIR_RS16655 PF07943 Penicillin-binding protein 5, C-terminal domain SIR_RS16660 PF01592 NifU-like N terminal domain SIR_RS16665 PF00266 Aminotransferase class-V SIR_RS16670 PF01458 Uncharacterized protein family (UPF0051) SIR_RS16675 PF00005 ABC transporter SIR_RS16680 PF00953 Glycosyl transferase family 4 SIR_RS16685 PF05389 Negative regulator of genetic competence (MecA) SIR_RS16690 PF02673 SIR_RS16690 SIR_RS16695 PF09972 SIR_RS16695 SIR_RS16700 PF00497 Bacterial extracellular solute-binding proteins, family 3 SIR_RS16700 PF00528 Binding-protein-dependent transport system inner membrane component SIR_RS16705 PF00005 ABC transporter SIR_RS16715 PF01145 SPFH domain / Band 7 family SIR_RS16720 PF00072 Response regulator receiver domain SIR_RS16720 PF00196 Bacterial regulatory proteins, luxR family SIR_RS16725 PF07730 Histidine kinase SIR_RS16730 PF01061 SIR_RS16730 SIR_RS16735 PF00005 ABC transporter SIR_RS16740 PF02734 DAK2 domain SIR_RS16740 PF13684 Dihydroxyacetone kinase family SIR_RS16745 PF03780 SIR_RS16745 SIR_RS16750 PF00830 Ribosomal L28 family SIR_RS16760 PF04397 LytTr DNA-binding domain SIR_RS16770 PF01116 Fructose-bisphosphate aldolase class-II SIR_RS16780 PF14526 Integron-associated effector binding protein SIR_RS16785 PF00117 Glutamine amidotransferase class-I SIR_RS16795 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SIR_RS16800 PF00953 Glycosyl transferase family 4 SIR_RS16800 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 SIR_RS16805 PF00905 Penicillin binding protein transpeptidase domain SIR_RS16805 PF03717 Penicillin-binding Protein dimerisation domain SIR_RS16805 PF03793 PASTA domain SIR_RS16815 PF01795 MraW methylase family SIR_RS16820 PF01381 Helix-turn-helix SIR_RS16830 PF02386 Cation transport protein SIR_RS16835 PF02254 TrkA-N domain SIR_RS16840 PF05979 Bacterial protein of unknown function (DUF896) SIR_RS16845 PF02092 SIR_RS16845 SIR_RS16850 PF02091 Glycyl-tRNA synthetase alpha subunit SIR_RS16855 PF01878 EVE domain SIR_RS16860 PF01047 MarR family SIR_RS16870 PF00082 Subtilase family SIR_RS16870 PF02225 PA domain SIR_RS16870 PF04650 SIR_RS16870 SIR_RS16870 PF06280 Fn3-like domain (DUF1034) SIR_RS16870 PF13585 C-terminal domain of CHU protein family SIR_RS16875 PF01979 Amidohydrolase family SIR_RS16880 PF01895 PhoU domain SIR_RS16880 PF02690 SIR_RS16880 SIR_RS16885 PF02033 Ribosome-binding factor A SIR_RS16890 PF00009 Elongation factor Tu GTP binding domain SIR_RS16890 PF04760 Translation initiation factor IF-2, N-terminal region SIR_RS16890 PF11987 Translation-initiation factor 2 SIR_RS16895 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family SIR_RS16900 PF04296 Protein of unknown function (DUF448) SIR_RS16905 PF08529 NusA N-terminal domain SIR_RS16905 PF13184 NusA-like KH domain SIR_RS16910 PF02576 Uncharacterised BCR, YhbC family COG0779 SIR_RS16915 PF01988 SIR_RS16915 SIR_RS16920 PF02390 Putative methyltransferase SIR_RS16925 PF01636 Phosphotransferase enzyme family SIR_RS16930 PF05975 SIR_RS16930 SIR_RS16935 PF00005 ABC transporter SIR_RS16940 PF01230 HIT domain SIR_RS16950 PF03816 Cell envelope-related transcriptional attenuator domain SIR_RS16955 PF00583 Acetyltransferase (GNAT) family SIR_RS16960 PF02367 Uncharacterised P-loop hydrolase UPF0079 SIR_RS16965 PF00860 Permease family SIR_RS16970 PF07099 SIR_RS16970 SIR_RS16975 PF08282 haloacid dehalogenase-like hydrolase SIR_RS16980 PF00107 Zinc-binding dehydrogenase SIR_RS16980 PF08240 Alcohol dehydrogenase GroES-like domain SIR_RS16985 PF03610 PTS system fructose IIA component SIR_RS16985 PF03830 PTS system sorbose subfamily IIB component SIR_RS16990 PF03609 SIR_RS16990 SIR_RS16995 PF03613 SIR_RS16995 SIR_RS17000 PF06115 SIR_RS17000 SIR_RS17005 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SIR_RS17005 PF02403 Seryl-tRNA synthetase N-terminal domain SIR_RS17010 PF09335 SIR_RS17010 SIR_RS17015 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit SIR_RS17020 PF01039 Carboxyl transferase domain SIR_RS17025 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain SIR_RS17025 PF02785 Biotin carboxylase C-terminal domain SIR_RS17025 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain SIR_RS17030 PF07977 FabA-like domain SIR_RS17035 PF00364 Biotin-requiring enzyme SIR_RS17040 PF00109 Beta-ketoacyl synthase, N-terminal domain SIR_RS17040 PF02801 Beta-ketoacyl synthase, C-terminal domain SIR_RS17045 PF13561 Enoyl-(Acyl carrier protein) reductase SIR_RS17050 PF00698 Acyl transferase domain SIR_RS17055 PF03060 Nitronate monooxygenase SIR_RS17060 PF00550 Phosphopantetheine attachment site SIR_RS17065 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal SIR_RS17065 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III SIR_RS17070 PF01047 MarR family SIR_RS17075 PF00378 Enoyl-CoA hydratase/isomerase family SIR_RS17080 PF00696 Amino acid kinase family SIR_RS17080 PF13840 ACT domain SIR_RS17110 PF00528 Binding-protein-dependent transport system inner membrane component SIR_RS17115 PF00005 ABC transporter SIR_RS17115 PF09383 NIL domain SIR_RS17120 PF01546 Peptidase family M20/M25/M40 SIR_RS17120 PF07687 Peptidase dimerisation domain SIR_RS17125 PF03180 NLPA lipoprotein SIR_RS17130 PF00497 Bacterial extracellular solute-binding proteins, family 3 SIR_RS17135 PF11611 Domain of unknown function (DUF4352) SIR_RS17135 PF17118 SIR_RS17135 SIR_RS17140 PF01709 Transcriptional regulator SIR_RS17145 PF05636 HIGH Nucleotidyl Transferase SIR_RS17150 PF13649 Methyltransferase domain SIR_RS17160 PF02410 Oligomerisation domain SIR_RS17165 PF00857 Isochorismatase family SIR_RS17170 PF01966 HD domain SIR_RS17175 PF01467 Cytidylyltransferase SIR_RS17180 PF01985 CRS1 / YhbY (CRM) domain SIR_RS17185 PF01926 50S ribosome-binding GTPase SIR_RS17190 PF13419 Haloacid dehalogenase-like hydrolase SIR_RS17195 PF09335 SIR_RS17195 SIR_RS17200 PF00892 EamA-like transporter family SIR_RS17205 PF00107 Zinc-binding dehydrogenase SIR_RS17205 PF08240 Alcohol dehydrogenase GroES-like domain SIR_RS17210 PF02637 GatB domain SIR_RS17210 PF02934 GatB/GatE catalytic domain SIR_RS17215 PF01425 Amidase SIR_RS17220 PF02686 Glu-tRNAGln amidotransferase C subunit SIR_RS17225 PF00152 tRNA synthetases class II (D, K and N) SIR_RS17225 PF01336 OB-fold nucleic acid binding domain SIR_RS17225 PF02938 GAD domain SIR_RS17230 PF00857 Isochorismatase family SIR_RS17235 PF06018 CodY GAF-like domain SIR_RS17235 PF08222 CodY helix-turn-helix domain SIR_RS17240 PF00155 Aminotransferase class I and II SIR_RS17245 PF00582 Universal stress protein family SIR_RS17250 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase SIR_RS17250 PF08282 haloacid dehalogenase-like hydrolase SIR_RS17255 PF00710 Asparaginase SIR_RS17265 PF00270 DEAD/DEAH box helicase SIR_RS17265 PF00271 Helicase conserved C-terminal domain SIR_RS17265 PF17191 SIR_RS17265 SIR_RS17270 PF00842 Alanine racemase, C-terminal domain SIR_RS17270 PF01168 Alanine racemase, N-terminal domain SIR_RS17275 PF01648 4'-phosphopantetheinyl transferase superfamily SIR_RS17280 PF00793 DAHP synthetase I family SIR_RS17285 PF01043 SecA preprotein cross-linking domain SIR_RS17285 PF02810 SEC-C motif SIR_RS17285 PF07516 SecA Wing and Scaffold domain SIR_RS17285 PF07517 SecA DEAD-like domain SIR_RS17290 PF13520 Amino acid permease SIR_RS17315 PF04740 SIR_RS17315 SIR_RS17330 PF01238 Phosphomannose isomerase type I SIR_RS17335 PF00392 Bacterial regulatory proteins, gntR family SIR_RS17335 PF07702 UTRA domain SIR_RS17340 PF02378 Phosphotransferase system, EIIC SIR_RS17345 PF00232 Glycosyl hydrolase family 1 SIR_RS17350 PF07883 Cupin domain SIR_RS17355 PF00005 ABC transporter SIR_RS17355 PF00664 ABC transporter transmembrane region SIR_RS17360 PF00005 ABC transporter SIR_RS17360 PF00664 ABC transporter transmembrane region SIR_RS17365 PF12802 MarR family SIR_RS17370 PF00724 NADH:flavin oxidoreductase / NADH oxidase family SIR_RS17375 PF01327 Polypeptide deformylase SIR_RS17380 PF00480 ROK family SIR_RS17385 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 SIR_RS17385 PF00367 phosphotransferase system, EIIB SIR_RS17385 PF02378 Phosphotransferase system, EIIC SIR_RS17390 PF00251 Glycosyl hydrolases family 32 N-terminal domain SIR_RS17390 PF08244 Glycosyl hydrolases family 32 C terminal SIR_RS17395 PF00356 Bacterial regulatory proteins, lacI family SIR_RS17395 PF13377 Periplasmic binding protein-like domain SIR_RS17400 PF08282 haloacid dehalogenase-like hydrolase SIR_RS17405 PF00005 ABC transporter SIR_RS17405 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SIR_RS17410 PF00005 ABC transporter SIR_RS17410 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SIR_RS17415 PF00528 Binding-protein-dependent transport system inner membrane component SIR_RS17415 PF12911 SIR_RS17415 SIR_RS17420 PF00528 Binding-protein-dependent transport system inner membrane component SIR_RS17425 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SIR_RS17430 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SIR_RS17435 PF03483 B3/4 domain SIR_RS17440 PF00117 Glutamine amidotransferase class-I SIR_RS17440 PF06418 CTP synthase N-terminus SIR_RS17445 PF05066 HB1, ASXL, restriction endonuclease HTH domain SIR_RS17450 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase SIR_RS17450 PF05697 Bacterial trigger factor protein (TF) SIR_RS17450 PF05698 Bacterial trigger factor protein (TF) C-terminus SIR_RS17455 PF04260 Protein of unknown function (DUF436) SIR_RS17460 PF07155 ECF-type riboflavin transporter, S component SIR_RS17465 PF08543 Phosphomethylpyrimidine kinase SIR_RS17470 PF01416 tRNA pseudouridine synthase SIR_RS17475 PF00293 NUDIX domain SIR_RS17480 PF00226 DnaJ domain SIR_RS17480 PF00684 DnaJ central domain SIR_RS17480 PF01556 DnaJ C terminal domain SIR_RS17485 PF00012 Hsp70 protein SIR_RS17490 PF01025 GrpE SIR_RS17495 PF01628 HrcA protein C terminal domain SIR_RS17495 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding SIR_RS17500 PF12698 ABC-2 family transporter protein SIR_RS17505 PF00005 ABC transporter SIR_RS17510 PF11193 SIR_RS17510 SIR_RS17515 PF03551 Transcriptional regulator PadR-like family SIR_RS17525 PF00300 Histidine phosphatase superfamily (branch 1) SIR_RS17535 PF05167 Uncharacterised ACR (DUF711) SIR_RS17540 PF13740 ACT domain SIR_RS17545 PF00356 Bacterial regulatory proteins, lacI family SIR_RS17545 PF13407 Periplasmic binding protein domain SIR_RS17550 PF07940 Heparinase II/III-like protein SIR_RS17550 PF16889 SIR_RS17550 SIR_RS17555 PF02699 Preprotein translocase subunit SIR_RS17560 PF03613 SIR_RS17560 SIR_RS17565 PF03609 SIR_RS17565 SIR_RS17570 PF03830 PTS system sorbose subfamily IIB component SIR_RS17575 PF07470 Glycosyl Hydrolase Family 88 SIR_RS17580 PF03610 PTS system fructose IIA component SIR_RS17585 PF13561 Enoyl-(Acyl carrier protein) reductase SIR_RS17590 PF02502 Ribose/Galactose Isomerase SIR_RS17590 PF12408 Ribose-5-phosphate isomerase SIR_RS17595 PF00294 pfkB family carbohydrate kinase SIR_RS17600 PF01081 KDPG and KHG aldolase SIR_RS17605 PF05737 Collagen binding domain SIR_RS17605 PF05738 Cna protein B-type domain SIR_RS17610 PF02278 Polysaccharide lyase family 8, super-sandwich domain SIR_RS17610 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain SIR_RS17610 PF08124 Polysaccharide lyase family 8, N terminal alpha-helical domain SIR_RS17615 PF00255 Glutathione peroxidase SIR_RS17620 PF13302 Acetyltransferase (GNAT) domain SIR_RS17625 PF05738 Cna protein B-type domain SIR_RS17630 PF05973 SIR_RS17630 SIR_RS17635 PF01381 Helix-turn-helix SIR_RS17645 PF12730 SIR_RS17645 SIR_RS17650 PF00005 ABC transporter SIR_RS17655 PF00005 ABC transporter SIR_RS17655 PF00664 ABC transporter transmembrane region SIR_RS17655 PF03412 Peptidase C39 family SIR_RS17665 PF06114 Domain of unknown function (DUF955) SIR_RS17680 PF01610 SIR_RS17680 SIR_RS17685 PF00122 E1-E2 ATPase SIR_RS17685 PF00702 haloacid dehalogenase-like hydrolase SIR_RS17695 PF00872 SIR_RS17695 SIR_RS17710 PF02661 Fic/DOC family SIR_RS17715 PF00005 ABC transporter SIR_RS17715 PF00664 ABC transporter transmembrane region SIR_RS17735 PF13630 SIR_RS17735 SIR_RS17745 PF02486 SIR_RS17745 SIR_RS17750 PF12728 Helix-turn-helix domain SIR_RS17755 PF00589 Phage integrase family SIR_RS17760 PF00380 Ribosomal protein S9/S16 SIR_RS17765 PF00572 Ribosomal protein L13 SIR_RS17770 PF02645 Uncharacterised protein, DegV family COG1307 SIR_RS17775 PF00588 SpoU rRNA Methylase family SIR_RS17775 PF08032 RNA 2'-O ribose methyltransferase substrate binding SIR_RS17780 PF00005 ABC transporter SIR_RS17780 PF08402 TOBE domain SIR_RS17785 PF13556 PucR C-terminal helix-turn-helix domain SIR_RS17790 PF00636 Ribonuclease III domain SIR_RS17795 PF01406 tRNA synthetases class I (C) catalytic domain SIR_RS17795 PF09190 DALR domain SIR_RS17800 PF01048 Phosphorylase superfamily SIR_RS17805 PF00132 Bacterial transferase hexapeptide (six repeats) SIR_RS17810 PF00013 KH domain SIR_RS17810 PF00575 S1 RNA binding domain SIR_RS17810 PF01138 3' exoribonuclease family, domain 1 SIR_RS17810 PF03725 3' exoribonuclease family, domain 2 SIR_RS17810 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain SIR_RS17815 PF01432 Peptidase family M3 SIR_RS17815 PF08439 Oligopeptidase F SIR_RS17825 PF00312 Ribosomal protein S15 SIR_RS17830 PF00849 RNA pseudouridylate synthase SIR_RS17830 PF01479 S4 domain SIR_RS17835 PF07690 Major Facilitator Superfamily SIR_RS17845 PF16316 SIR_RS17845 SIR_RS17850 PF09359 VTC domain SIR_RS17855 PF08757 SIR_RS17855 SIR_RS17860 PF16933 SIR_RS17860 SIR_RS17865 PF00534 Glycosyl transferases group 1 SIR_RS17865 PF11997 SIR_RS17865 SIR_RS17870 PF09960 SIR_RS17870 SIR_RS17885 PF01327 Polypeptide deformylase SIR_RS17890 PF04226 SIR_RS17890 SIR_RS17895 PF02073 Thermophilic metalloprotease (M29) SIR_RS17905 PF00929 Exonuclease SIR_RS17905 PF02811 PHP domain SIR_RS17905 PF07733 Bacterial DNA polymerase III alpha subunit SIR_RS17905 PF11490 SIR_RS17905 SIR_RS17905 PF14480 SIR_RS17905 SIR_RS17910 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) SIR_RS17915 PF00128 Alpha amylase, catalytic domain SIR_RS17915 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) SIR_RS17915 PF03714 Bacterial pullanase-associated domain SIR_RS17920 PF00133 tRNA synthetases class I (I, L, M and V) SIR_RS17920 PF08264 Anticodon-binding domain of tRNA SIR_RS17920 PF09334 tRNA synthetases class I (M) SIR_RS17920 PF13603 Leucyl-tRNA synthetase, Domain 2 SIR_RS17925 PF01431 Peptidase family M13 SIR_RS17925 PF05649 Peptidase family M13 SIR_RS17930 PF00005 ABC transporter SIR_RS17935 PF00950 SIR_RS17935 SIR_RS17940 PF01297 Periplasmic solute binding protein family SIR_RS17945 PF01325 Iron dependent repressor, N-terminal DNA binding domain SIR_RS17945 PF02742 Iron dependent repressor, metal binding and dimerisation domain SIR_RS17945 PF04023 FeoA domain SIR_RS17950 PF02580 D-Tyr-tRNA(Tyr) deacylase SIR_RS17955 PF02824 TGS domain SIR_RS17955 PF04607 Region found in RelA / SpoT proteins SIR_RS17955 PF13291 ACT domain SIR_RS17955 PF13328 HD domain SIR_RS17960 PF04452 RNA methyltransferase SIR_RS17965 PF06325 Ribosomal protein L11 methyltransferase (PrmA) SIR_RS17970 PF13673 Acetyltransferase (GNAT) domain SIR_RS17975 PF00293 NUDIX domain SIR_RS17980 PF11217 Protein of unknown function (DUF3013) SIR_RS17985 PF00004 ATPase family associated with various cellular activities (AAA) SIR_RS17985 PF12002 MgsA AAA+ ATPase C terminal SIR_RS17985 PF16193 SIR_RS17985 SIR_RS17995 PF08282 haloacid dehalogenase-like hydrolase SIR_RS18000 PF00356 Bacterial regulatory proteins, lacI family SIR_RS18000 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family SIR_RS18010 PF02677 SIR_RS18010 SIR_RS18015 PF00118 TCP-1/cpn60 chaperonin family SIR_RS18020 PF00166 Chaperonin 10 Kd subunit SIR_RS18030 PF03613 SIR_RS18030 SIR_RS18035 PF03609 SIR_RS18035 SIR_RS18040 PF03830 PTS system sorbose subfamily IIB component SIR_RS18045 PF03610 PTS system fructose IIA component SIR_RS18050 PF13416 Bacterial extracellular solute-binding protein SIR_RS18055 PF00072 Response regulator receiver domain SIR_RS18055 PF00196 Bacterial regulatory proteins, luxR family SIR_RS18060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SIR_RS18060 PF07730 Histidine kinase SIR_RS18065 PF13407 Periplasmic binding protein domain SIR_RS18070 PF00436 Single-strand binding protein family SIR_RS18075 PF01588 Putative tRNA binding domain SIR_RS18075 PF14794 Domain of unknown function (DUF4479) SIR_RS18080 PF00085 Thioredoxin SIR_RS18085 PF15513 Domain of unknown function (DUF4651) SIR_RS18090 PF05343 M42 glutamyl aminopeptidase SIR_RS18095 PF12822 Protein of unknown function (DUF3816) SIR_RS18100 PF02875 Mur ligase family, glutamate ligase domain SIR_RS18100 PF08245 Mur ligase middle domain SIR_RS18110 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SIR_RS18110 PF03129 Anticodon binding domain SIR_RS18110 PF04073 Aminoacyl-tRNA editing domain SIR_RS18115 PF02163 Peptidase family M50 SIR_RS18120 PF01148 Cytidylyltransferase family SIR_RS18125 PF01255 Putative undecaprenyl diphosphate synthase SIR_RS18130 PF02699 Preprotein translocase subunit SIR_RS18140 PF00456 Transketolase, thiamine diphosphate binding domain SIR_RS18140 PF02779 Transketolase, pyrimidine binding domain SIR_RS18140 PF02780 Transketolase, C-terminal domain SIR_RS18145 PF13483 Beta-lactamase superfamily domain SIR_RS18150 PF00874 PRD domain SIR_RS18150 PF08279 HTH domain SIR_RS18155 PF00596 Class II Aldolase and Adducin N-terminal domain SIR_RS18160 PF01261 Xylose isomerase-like TIM barrel SIR_RS18165 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family SIR_RS18170 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SIR_RS18175 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SIR_RS18180 PF03611 SIR_RS18180 SIR_RS18185 PF00004 ATPase family associated with various cellular activities (AAA) SIR_RS18185 PF07724 AAA domain (Cdc48 subfamily) SIR_RS18185 PF10431 C-terminal, D2-small domain, of ClpB protein SIR_RS18190 PF01380 SIS domain SIR_RS18190 PF13522 Glutamine amidotransferase domain SIR_RS18195 PF00871 Acetokinase family SIR_RS18200 PF02384 N-6 DNA Methylase SIR_RS18210 PF15980 SIR_RS18210 SIR_RS18215 PF11773 SIR_RS18215 SIR_RS18225 PF13544 SIR_RS18225 SIR_RS18230 PF00482 Type II secretion system (T2SS), protein F SIR_RS18235 PF00437 Type II/IV secretion system protein SIR_RS18240 PF06279 SIR_RS18240 SIR_RS18245 PF00120 Glutamine synthetase, catalytic domain SIR_RS18245 PF03951 Glutamine synthetase, beta-Grasp domain SIR_RS18250 PF13411 MerR HTH family regulatory protein SIR_RS18255 PF06081 SIR_RS18255 SIR_RS18260 PF01476 LysM domain SIR_RS18260 PF05257 CHAP domain SIR_RS18265 PF00746 SIR_RS18265 SIR_RS18265 PF06696 Streptococcal surface antigen repeat SIR_RS18265 PF08363 Glucan-binding protein C SIR_RS18265 PF16364 SIR_RS18265 SIR_RS18270 PF00162 Phosphoglycerate kinase SIR_RS18275 PF00623 RNA polymerase Rpb1, domain 2 SIR_RS18275 PF04983 RNA polymerase Rpb1, domain 3 SIR_RS18275 PF04997 RNA polymerase Rpb1, domain 1 SIR_RS18275 PF04998 RNA polymerase Rpb1, domain 5 SIR_RS18275 PF05000 RNA polymerase Rpb1, domain 4 SIR_RS18280 PF00562 RNA polymerase Rpb2, domain 6 SIR_RS18280 PF04560 RNA polymerase Rpb2, domain 7 SIR_RS18280 PF04561 RNA polymerase Rpb2, domain 2 SIR_RS18280 PF04563 RNA polymerase beta subunit SIR_RS18280 PF04565 RNA polymerase Rpb2, domain 3 SIR_RS18280 PF10385 RNA polymerase beta subunit external 1 domain SIR_RS18285 PF00905 Penicillin binding protein transpeptidase domain SIR_RS18285 PF00912 Transglycosylase SIR_RS18290 PF00579 tRNA synthetases class I (W and Y) SIR_RS18290 PF01479 S4 domain SIR_RS18295 PF13847 Methyltransferase domain SIR_RS18300 PF01694 Rhomboid family SIR_RS18305 PF01812 5-formyltetrahydrofolate cyclo-ligase family SIR_RS18310 PF01546 Peptidase family M20/M25/M40 SIR_RS18310 PF07687 Peptidase dimerisation domain SIR_RS18315 PF00132 Bacterial transferase hexapeptide (six repeats) SIR_RS18315 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal SIR_RS18315 PF14602 Hexapeptide repeat of succinyl-transferase SIR_RS18320 PF00749 tRNA synthetases class I (E and Q), catalytic domain SIR_RS18325 PF13481 AAA domain SIR_RS18325 PF13541 Subunit ChlI of Mg-chelatase SIR_RS18330 PF00857 Isochorismatase family SIR_RS18335 PF00692 dUTPase SIR_RS18340 PF02016 LD-carboxypeptidase SIR_RS18350 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus SIR_RS18350 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus SIR_RS18355 PF00483 Nucleotidyl transferase SIR_RS18370 PF01638 HxlR-like helix-turn-helix SIR_RS18385 PF06114 Domain of unknown function (DUF955) SIR_RS18390 PF01381 Helix-turn-helix SIR_RS18395 PF01161 Phosphatidylethanolamine-binding protein SIR_RS18400 PF04221 RelB antitoxin SIR_RS18405 PF15738 SIR_RS18405 SIR_RS18425 PF06125 Bacterial protein of unknown function (DUF961) SIR_RS18430 PF01580 FtsK/SpoIIIE family SIR_RS18435 PF02486 SIR_RS18435 SIR_RS18460 PF12642 Conjugative transposon protein TcpC SIR_RS18470 PF12648 SIR_RS18470 SIR_RS18475 PF12846 AAA-like domain SIR_RS18490 PF05257 CHAP domain SIR_RS18495 PF12961 Domain of Unknown Function with PDB structure (DUF3850) SIR_RS18500 PF05595 SIR_RS18500 SIR_RS18505 PF00589 Phage integrase family SIR_RS18600 PF01196 Ribosomal protein L17 SIR_RS18605 PF01000 RNA polymerase Rpb3/RpoA insert domain SIR_RS18605 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain SIR_RS18605 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain SIR_RS18610 PF00411 Ribosomal protein S11 SIR_RS18615 PF00416 Ribosomal protein S13/S18 SIR_RS18620 PF01176 Translation initiation factor 1A / IF-1 SIR_RS18625 PF00406 Adenylate kinase SIR_RS18630 PF00344 SecY translocase SIR_RS18635 PF00828 Ribosomal protein L18e/L15 SIR_RS18640 PF00327 Ribosomal protein L30p/L7e SIR_RS18645 PF00333 Ribosomal protein S5, N-terminal domain SIR_RS18645 PF03719 Ribosomal protein S5, C-terminal domain SIR_RS18650 PF00861 Ribosomal L18p/L5e family SIR_RS18655 PF00347 Ribosomal protein L6 SIR_RS18660 PF00410 Ribosomal protein S8 SIR_RS18665 PF00253 Ribosomal protein S14p/S29e SIR_RS18670 PF00281 Ribosomal protein L5 SIR_RS18670 PF00673 ribosomal L5P family C-terminus SIR_RS18675 PF00467 KOW motif SIR_RS18675 PF17136 SIR_RS18675 SIR_RS18680 PF00238 Ribosomal protein L14p/L23e SIR_RS18685 PF00366 Ribosomal protein S17 SIR_RS18690 PF00831 Ribosomal L29 protein SIR_RS18695 PF00252 Ribosomal protein L16p/L10e SIR_RS18700 PF00189 Ribosomal protein S3, C-terminal domain SIR_RS18700 PF07650 KH domain SIR_RS18705 PF00237 Ribosomal protein L22p/L17e SIR_RS18710 PF00203 Ribosomal protein S19 SIR_RS18715 PF00181 Ribosomal Proteins L2, RNA binding domain SIR_RS18715 PF03947 Ribosomal Proteins L2, C-terminal domain SIR_RS18720 PF00276 Ribosomal protein L23 SIR_RS18725 PF00573 Ribosomal protein L4/L1 family SIR_RS18730 PF00297 Ribosomal protein L3 SIR_RS18735 PF00338 Ribosomal protein S10p/S20e SIR_RS18740 PF00485 Phosphoribulokinase / Uridine kinase family SIR_RS18745 PF01702 Queuine tRNA-ribosyltransferase SIR_RS18750 PF06161 SIR_RS18750 SIR_RS18755 PF13671 AAA domain SIR_RS18760 PF13380 CoA binding domain SIR_RS18765 PF00476 DNA polymerase family A SIR_RS18765 PF01367 5'-3' exonuclease, C-terminal SAM fold SIR_RS18765 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain SIR_RS18770 PF00300 Histidine phosphatase superfamily (branch 1) SIR_RS18775 PF14317 SIR_RS18775 SIR_RS18780 PF08282 haloacid dehalogenase-like hydrolase SIR_RS18785 PF00367 phosphotransferase system, EIIB SIR_RS18785 PF02378 Phosphotransferase system, EIIC SIR_RS18790 PF01380 SIS domain SIR_RS18790 PF01418 Helix-turn-helix domain, rpiR family SIR_RS18795 PF00512 His Kinase A (phospho-acceptor) domain SIR_RS18795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SIR_RS18800 PF00072 Response regulator receiver domain SIR_RS18800 PF00486 Transcriptional regulatory protein, C terminal SIR_RS18805 PF00746 SIR_RS18805 SIR_RS18805 PF04650 SIR_RS18805 SIR_RS18805 PF11966 SIR_RS18805 SIR_RS18815 PF01370 NAD dependent epimerase/dehydratase family SIR_RS18820 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase SIR_RS18830 PF00535 Glycosyl transferase family 2 SIR_RS18840 PF00535 Glycosyl transferase family 2 SIR_RS18845 PF02397 SIR_RS18845 SIR_RS18850 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family SIR_RS18855 PF02719 Polysaccharide biosynthesis protein SIR_RS18855 PF13727 CoA-binding domain SIR_RS18860 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain SIR_RS18865 PF02706 Chain length determinant protein SIR_RS18875 PF02916 DNA polymerase processivity factor SIR_RS18875 PF03816 Cell envelope-related transcriptional attenuator domain SIR_RS18880 PF13353 4Fe-4S single cluster domain SIR_RS18885 PF13302 Acetyltransferase (GNAT) domain SIR_RS18890 PF13302 Acetyltransferase (GNAT) domain SIR_RS18895 PF03477 ATP cone domain SIR_RS18895 PF13597 Anaerobic ribonucleoside-triphosphate reductase SIR_RS18905 PF13091 PLD-like domain SIR_RS18905 PF13396 SIR_RS18905 SIR_RS18910 PF12182 Bacterial lipoprotein SIR_RS18915 PF08245 Mur ligase middle domain SIR_RS18920 PF06949 SIR_RS18920 SIR_RS18925 PF03652 Uncharacterised protein family (UPF0081) SIR_RS18930 PF06135 SIR_RS18930 SIR_RS18935 PF06998 Protein of unknown function (DUF1307) SIR_RS18945 PF00462 Glutaredoxin SIR_RS18945 PF03960 ArsC family SIR_RS18950 PF00154 recA bacterial DNA recombination protein SIR_RS18955 PF00994 Probable molybdopterin binding domain SIR_RS18955 PF02464 Competence-damaged protein SIR_RS18960 PF00746 SIR_RS18960 SIR_RS18960 PF05738 Cna protein B-type domain SIR_RS18960 PF12892 T surface-antigen of pili SIR_RS18965 PF02517 CAAX protease self-immunity SIR_RS18970 PF03352 Methyladenine glycosylase SIR_RS18975 PF01330 RuvA N terminal domain SIR_RS18975 PF07499 RuvA, C-terminal domain SIR_RS18975 PF14520 Helix-hairpin-helix domain SIR_RS18980 PF01381 Helix-turn-helix SIR_RS18985 PF06271 SIR_RS18985 SIR_RS18990 PF01119 DNA mismatch repair protein, C-terminal domain SIR_RS18990 PF08676 MutL C terminal dimerisation domain SIR_RS18990 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SIR_RS18995 PF04397 LytTr DNA-binding domain SIR_RS19000 PF11457 SIR_RS19000 SIR_RS19005 PF00488 MutS domain V SIR_RS19005 PF01624 MutS domain I SIR_RS19005 PF05188 MutS domain II SIR_RS19005 PF05190 MutS family domain IV SIR_RS19005 PF05192 MutS domain III SIR_RS19010 PF01316 Arginine repressor, DNA binding domain SIR_RS19010 PF02863 Arginine repressor, C-terminal domain SIR_RS19015 PF00750 tRNA synthetases class I (R) SIR_RS19015 PF03485 Arginyl tRNA synthetase N terminal domain SIR_RS19015 PF05746 DALR anticodon binding domain SIR_RS19020 PF07972 NrdI Flavodoxin like SIR_RS19030 PF00343 Carbohydrate phosphorylase SIR_RS19035 PF02446 4-alpha-glucanotransferase SIR_RS19045 PF13416 Bacterial extracellular solute-binding protein SIR_RS19050 PF00528 Binding-protein-dependent transport system inner membrane component SIR_RS19055 PF00528 Binding-protein-dependent transport system inner membrane component SIR_RS19065 PF00356 Bacterial regulatory proteins, lacI family SIR_RS19065 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family SIR_RS19070 PF00128 Alpha amylase, catalytic domain SIR_RS19070 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) SIR_RS19075 PF02588 SIR_RS19075 SIR_RS19075 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) SIR_RS19080 PF00152 tRNA synthetases class II (D, K and N) SIR_RS19080 PF01336 OB-fold nucleic acid binding domain SIR_RS19080 PF02938 GAD domain SIR_RS19090 PF03129 Anticodon binding domain SIR_RS19090 PF13393 Histidyl-tRNA synthetase SIR_RS19095 PF01783 Ribosomal L32p protein family SIR_RS19100 PF00471 Ribosomal protein L33 SIR_RS19105 PF03596 SIR_RS19105 SIR_RS19110 PF01022 Bacterial regulatory protein, arsR family SIR_RS19120 PF08281 Sigma-70, region 4 SIR_RS19130 PF10412 Type IV secretion-system coupling protein DNA-binding domain SIR_RS19140 PF01719 Plasmid replication protein SIR_RS19145 PF13411 MerR HTH family regulatory protein SIR_RS19150 PF00589 Phage integrase family SIR_RS19150 PF14659 Phage integrase, N-terminal SAM-like domain SIR_RS19160 PF00069 Protein kinase domain SIR_RS19165 PF12844 Helix-turn-helix domain SIR_RS19170 PF00122 E1-E2 ATPase SIR_RS19170 PF00702 haloacid dehalogenase-like hydrolase SIR_RS19175 PF07690 Major Facilitator Superfamily SIR_RS19180 PF02245 Methylpurine-DNA glycosylase (MPG) SIR_RS19185 PF00455 SIR_RS19185 SIR_RS19185 PF08220 DeoR-like helix-turn-helix domain SIR_RS19190 PF08282 haloacid dehalogenase-like hydrolase SIR_RS19200 PF04914 DltD C-terminal region SIR_RS19200 PF04915 DltD N-terminal region SIR_RS19200 PF04918 DltD central region SIR_RS19205 PF00550 Phosphopantetheine attachment site SIR_RS19210 PF03062 SIR_RS19210 SIR_RS19215 PF00501 AMP-binding enzyme SIR_RS19215 PF13193 AMP-binding enzyme C-terminal domain SIR_RS19220 PF12459 SIR_RS19220 SIR_RS19225 PF03551 Transcriptional regulator PadR-like family SIR_RS19230 PF13349 SIR_RS19230 SIR_RS19235 PF13419 Haloacid dehalogenase-like hydrolase SIR_RS19240 PF14262 Domain of unknown function (DUF4353) SIR_RS19245 PF16316 SIR_RS19245 SIR_RS19250 PF09359 VTC domain SIR_RS19265 PF00085 Thioredoxin SIR_RS19285 PF08282 haloacid dehalogenase-like hydrolase SIR_RS19290 PF12698 ABC-2 family transporter protein SIR_RS19295 PF00440 Bacterial regulatory proteins, tetR family SIR_RS19300 PF00163 Ribosomal protein S4/S9 N-terminal domain SIR_RS19300 PF01479 S4 domain SIR_RS19305 PF13419 Haloacid dehalogenase-like hydrolase SIR_RS19310 PF06257 Protein of unknown function (DUF1021) SIR_RS19315 PF00772 DnaB-like helicase N terminal domain SIR_RS19315 PF03796 DnaB-like helicase C terminal domain SIR_RS19320 PF01281 Ribosomal protein L9, N-terminal domain SIR_RS19320 PF03948 Ribosomal protein L9, C-terminal domain SIR_RS19325 PF01368 DHH family SIR_RS19325 PF02272 DHHA1 domain SIR_RS19330 PF01134 Glucose inhibited division protein A SIR_RS19330 PF13932 GidA associated domain 3 SIR_RS19335 PF03054 tRNA methyl transferase SIR_RS19340 PF01476 LysM domain SIR_RS19345 PF01842 ACT domain SIR_RS19345 PF03315 Serine dehydratase beta chain SIR_RS19350 PF03313 SIR_RS19350 SIR_RS19355 PF13419 Haloacid dehalogenase-like hydrolase SIR_RS19360 PF01464 Transglycosylase SLT domain SIR_RS19360 PF01476 LysM domain SIR_RS19365 PF02361 Cobalt transport protein SIR_RS19370 PF00005 ABC transporter SIR_RS19375 PF00005 ABC transporter SIR_RS19380 PF01066 CDP-alcohol phosphatidyltransferase SIR_RS19385 PF13413 Helix-turn-helix domain SIR_RS19390 PF00675 Insulinase (Peptidase family M16) SIR_RS19390 PF05193 Peptidase M16 inactive domain SIR_RS19395 PF05193 Peptidase M16 inactive domain SIR_RS19400 PF13275 S4 domain SIR_RS19405 PF02463 RecF/RecN/SMC N terminal domain SIR_RS19410 PF00478 IMP dehydrogenase / GMP reductase domain SIR_RS19410 PF00571 CBS domain SIR_RS19415 PF00579 tRNA synthetases class I (W and Y) SIR_RS19420 PF01370 NAD dependent epimerase/dehydratase family SIR_RS19425 PF00121 Triosephosphate isomerase SIR_RS19430 PF02525 Flavodoxin-like fold SIR_RS19435 PF00005 ABC transporter SIR_RS19435 PF12848 ABC transporter SIR_RS19440 PF09586 SIR_RS19440 SIR_RS19455 PF00072 Response regulator receiver domain SIR_RS19455 PF04397 LytTr DNA-binding domain SIR_RS19460 PF14501 GHKL domain SIR_RS19475 PF02590 Predicted SPOUT methyltransferase SIR_RS19480 PF13180 PDZ domain SIR_RS19480 PF13365 Trypsin-like peptidase domain SIR_RS19485 PF02195 ParB-like nuclease domain SIR_RS19495 PF14350 SIR_RS19495 SIR_RS19500 PF14021 SIR_RS19500 SIR_RS19525 PF05147 Lanthionine synthetase C-like protein SIR_RS19550 PF04991 SIR_RS19550