SII_RS02425 bd647978da84a54176f64e2a678c0d61 578 SUPERFAMILY SSF52540 322 569 6.14E-85 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS02425 bd647978da84a54176f64e2a678c0d61 578 Pfam PF00664 ABC transporter transmembrane region 16 279 5.9E-40 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SII_RS02425 bd647978da84a54176f64e2a678c0d61 578 ProSitePatterns PS00211 ABC transporters family signature. 471 485 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SII_RS02425 bd647978da84a54176f64e2a678c0d61 578 SUPERFAMILY SSF90123 2 313 1.31E-67 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SII_RS02425 bd647978da84a54176f64e2a678c0d61 578 Gene3D G3DSA:3.40.50.300 331 563 1.1E-76 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS02425 bd647978da84a54176f64e2a678c0d61 578 PANTHER PTHR24221 1 578 3.0E-185 T 22-04-2016 SII_RS02425 bd647978da84a54176f64e2a678c0d61 578 SMART SM00382 359 551 3.0E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain SII_RS02425 bd647978da84a54176f64e2a678c0d61 578 Pfam PF00005 ABC transporter 350 497 8.5E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SII_RS02425 bd647978da84a54176f64e2a678c0d61 578 Gene3D G3DSA:1.20.1560.10 2 318 1.2E-65 T 22-04-2016 SII_RS01840 12d274076f7316b7ae2dcef2aba65305 328 SUPERFAMILY SSF52972 127 320 7.33E-64 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like SII_RS01840 12d274076f7316b7ae2dcef2aba65305 328 PANTHER PTHR11067:SF9 122 327 9.1E-75 T 22-04-2016 SII_RS01840 12d274076f7316b7ae2dcef2aba65305 328 Gene3D G3DSA:3.90.950.10 118 321 1.5E-75 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like SII_RS01840 12d274076f7316b7ae2dcef2aba65305 328 Pfam PF01725 Ham1 family 129 317 1.4E-50 T 22-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 SII_RS01840 12d274076f7316b7ae2dcef2aba65305 328 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 128 319 7.0E-55 T 22-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 SII_RS01840 12d274076f7316b7ae2dcef2aba65305 328 PANTHER PTHR11067 122 327 9.1E-75 T 22-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 SII_RS01840 12d274076f7316b7ae2dcef2aba65305 328 Hamap MF_01405 dITP/XTP pyrophosphatase [rdgB]. 127 321 48.83 T 22-04-2016 IPR020922 Non-canonical purine NTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 SII_RS04775 0e702d197a6ca77cb279c07beea38ec7 270 PANTHER PTHR10000 1 270 1.1E-102 T 22-04-2016 SII_RS04775 0e702d197a6ca77cb279c07beea38ec7 270 ProSitePatterns PS01228 Hypothetical cof family signature 1. 6 17 - T 22-04-2016 IPR000150 Cof protein GO:0016787 SII_RS04775 0e702d197a6ca77cb279c07beea38ec7 270 Gene3D G3DSA:3.40.50.1000 1 78 3.9E-53 T 22-04-2016 IPR023214 HAD-like domain SII_RS04775 0e702d197a6ca77cb279c07beea38ec7 270 Gene3D G3DSA:3.40.50.1000 183 269 3.9E-53 T 22-04-2016 IPR023214 HAD-like domain SII_RS04775 0e702d197a6ca77cb279c07beea38ec7 270 Pfam PF08282 haloacid dehalogenase-like hydrolase 7 264 4.1E-63 T 22-04-2016 IPR023214 HAD-like domain SII_RS04775 0e702d197a6ca77cb279c07beea38ec7 270 PANTHER PTHR10000:SF1 1 270 1.1E-102 T 22-04-2016 SII_RS04775 0e702d197a6ca77cb279c07beea38ec7 270 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 6 236 6.4E-31 T 22-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 SII_RS04775 0e702d197a6ca77cb279c07beea38ec7 270 Gene3D G3DSA:3.30.1240.10 89 182 4.0E-19 T 22-04-2016 SII_RS04775 0e702d197a6ca77cb279c07beea38ec7 270 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 6 264 3.9E-57 T 22-04-2016 IPR000150 Cof protein GO:0016787 SII_RS04775 0e702d197a6ca77cb279c07beea38ec7 270 SUPERFAMILY SSF56784 2 269 2.07E-70 T 22-04-2016 IPR023214 HAD-like domain SII_RS06725 a7f7009d8cc67819dd03305b0c5e96c2 208 ProSitePatterns PS00856 Guanylate kinase-like signature. 40 57 - T 22-04-2016 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 SII_RS06725 a7f7009d8cc67819dd03305b0c5e96c2 208 PANTHER PTHR23117 1 204 3.3E-94 T 22-04-2016 SII_RS06725 a7f7009d8cc67819dd03305b0c5e96c2 208 Gene3D G3DSA:3.30.63.10 35 87 3.0E-27 T 22-04-2016 SII_RS06725 a7f7009d8cc67819dd03305b0c5e96c2 208 Pfam PF00625 Guanylate kinase 7 186 1.7E-51 T 22-04-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit SII_RS06725 a7f7009d8cc67819dd03305b0c5e96c2 208 SUPERFAMILY SSF52540 3 190 1.4E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS06725 a7f7009d8cc67819dd03305b0c5e96c2 208 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 5 184 8.4E-72 T 22-04-2016 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 SII_RS06725 a7f7009d8cc67819dd03305b0c5e96c2 208 SMART SM00072 4 187 6.9E-70 T 22-04-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit SII_RS06725 a7f7009d8cc67819dd03305b0c5e96c2 208 Gene3D G3DSA:3.40.50.300 88 204 7.8E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS06725 a7f7009d8cc67819dd03305b0c5e96c2 208 Gene3D G3DSA:3.40.50.300 3 27 7.8E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS06725 a7f7009d8cc67819dd03305b0c5e96c2 208 Hamap MF_00328 Guanylate kinase [gmk]. 3 187 36.771 T 22-04-2016 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 SII_RS06725 a7f7009d8cc67819dd03305b0c5e96c2 208 PANTHER PTHR23117:SF13 1 204 3.3E-94 T 22-04-2016 SII_RS00695 20a2463a0dd927b169bf366e1718810f 290 Gene3D G3DSA:3.90.1280.10 233 288 1.0E-25 T 22-04-2016 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 SII_RS00695 20a2463a0dd927b169bf366e1718810f 290 PANTHER PTHR30111:SF1 1 290 4.5E-84 T 22-04-2016 SII_RS00695 20a2463a0dd927b169bf366e1718810f 290 SUPERFAMILY SSF118352 231 287 1.44E-20 T 22-04-2016 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 SII_RS00695 20a2463a0dd927b169bf366e1718810f 290 Gene3D G3DSA:3.55.30.10 1 232 1.1E-72 T 22-04-2016 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 SII_RS00695 20a2463a0dd927b169bf366e1718810f 290 SUPERFAMILY SSF64397 1 239 1.83E-62 T 22-04-2016 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 SII_RS00695 20a2463a0dd927b169bf366e1718810f 290 Pfam PF01430 Hsp33 protein 2 278 6.0E-79 T 22-04-2016 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 SII_RS00695 20a2463a0dd927b169bf366e1718810f 290 PANTHER PTHR30111 1 290 4.5E-84 T 22-04-2016 SII_RS00695 20a2463a0dd927b169bf366e1718810f 290 Hamap MF_00117 33 kDa chaperonin [hslO]. 1 289 36.036 T 22-04-2016 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 SII_RS00695 20a2463a0dd927b169bf366e1718810f 290 PIRSF PIRSF005261 1 290 3.3E-72 T 22-04-2016 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 SII_RS05690 b276dc6513362877d34432850a82860d 182 Gene3D G3DSA:3.40.50.880 1 177 3.3E-55 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like SII_RS05690 b276dc6513362877d34432850a82860d 182 PANTHER PTHR11019:SF4 1 180 5.0E-60 T 22-04-2016 SII_RS05690 b276dc6513362877d34432850a82860d 182 PANTHER PTHR11019 1 180 5.0E-60 T 22-04-2016 SII_RS05690 b276dc6513362877d34432850a82860d 182 SUPERFAMILY SSF52317 1 167 2.9E-48 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like SII_RS05690 b276dc6513362877d34432850a82860d 182 TIGRFAM TIGR01383 not_thiJ: DJ-1 family protein 3 167 2.7E-58 T 22-04-2016 IPR006287 DJ-1 SII_RS05690 b276dc6513362877d34432850a82860d 182 Pfam PF01965 DJ-1/PfpI family 3 161 7.1E-44 T 22-04-2016 IPR002818 DJ-1/PfpI SII_RS01105 cb1c94ebfef2d08cc963eeaf766098ca 99 PIRSF PIRSF004555 1 99 4.4E-25 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family SII_RS01105 cb1c94ebfef2d08cc963eeaf766098ca 99 SUPERFAMILY SSF82607 4 95 8.11E-25 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family SII_RS01105 cb1c94ebfef2d08cc963eeaf766098ca 99 Pfam PF02575 YbaB/EbfC DNA-binding family 8 97 2.0E-25 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family SII_RS01105 cb1c94ebfef2d08cc963eeaf766098ca 99 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 3 90 2.5E-21 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family SII_RS01105 cb1c94ebfef2d08cc963eeaf766098ca 99 PANTHER PTHR33449:SF1 1 99 4.0E-33 T 22-04-2016 SII_RS01105 cb1c94ebfef2d08cc963eeaf766098ca 99 Gene3D G3DSA:3.30.1310.10 1 97 2.1E-28 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family SII_RS01105 cb1c94ebfef2d08cc963eeaf766098ca 99 PANTHER PTHR33449 1 99 4.0E-33 T 22-04-2016 SII_RS01105 cb1c94ebfef2d08cc963eeaf766098ca 99 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 2 96 18.864 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family SII_RS07080 771b196ed8da1458d979691bc478a778 945 Pfam PF00009 Elongation factor Tu GTP binding domain 452 608 7.0E-35 T 22-04-2016 SII_RS07080 771b196ed8da1458d979691bc478a778 945 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 449 606 3.0E-36 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 SII_RS07080 771b196ed8da1458d979691bc478a778 945 Gene3D G3DSA:2.40.30.10 849 944 3.2E-34 T 22-04-2016 SII_RS07080 771b196ed8da1458d979691bc478a778 945 Pfam PF11987 Translation-initiation factor 2 732 837 3.6E-37 T 22-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 SII_RS07080 771b196ed8da1458d979691bc478a778 945 SUPERFAMILY SSF52540 432 621 8.2E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS07080 771b196ed8da1458d979691bc478a778 945 SUPERFAMILY SSF50447 848 943 6.45E-28 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain SII_RS07080 771b196ed8da1458d979691bc478a778 945 PANTHER PTHR23115 795 943 7.0E-202 T 22-04-2016 SII_RS07080 771b196ed8da1458d979691bc478a778 945 SUPERFAMILY SSF50447 620 702 2.52E-23 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain SII_RS07080 771b196ed8da1458d979691bc478a778 945 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 3 945 16.993 T 22-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 SII_RS07080 771b196ed8da1458d979691bc478a778 945 Gene3D G3DSA:2.40.30.10 620 709 6.6E-22 T 22-04-2016 SII_RS07080 771b196ed8da1458d979691bc478a778 945 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 367 418 1.3E-13 T 22-04-2016 IPR006847 Translation initiation factor IF-2, N-terminal SII_RS07080 771b196ed8da1458d979691bc478a778 945 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 2 50 8.7E-14 T 22-04-2016 IPR006847 Translation initiation factor IF-2, N-terminal SII_RS07080 771b196ed8da1458d979691bc478a778 945 PANTHER PTHR23115 432 771 7.0E-202 T 22-04-2016 SII_RS07080 771b196ed8da1458d979691bc478a778 945 SUPERFAMILY SSF52156 725 854 4.45E-39 T 22-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 SII_RS07080 771b196ed8da1458d979691bc478a778 945 PANTHER PTHR23115:SF184 795 943 7.0E-202 T 22-04-2016 SII_RS07080 771b196ed8da1458d979691bc478a778 945 PANTHER PTHR23115:SF184 432 771 7.0E-202 T 22-04-2016 SII_RS07080 771b196ed8da1458d979691bc478a778 945 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 360 943 9.8E-249 T 22-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 SII_RS07080 771b196ed8da1458d979691bc478a778 945 PRINTS PR00449 Transforming protein P21 ras signature 547 560 9.3E-6 T 22-04-2016 SII_RS07080 771b196ed8da1458d979691bc478a778 945 PRINTS PR00449 Transforming protein P21 ras signature 450 471 9.3E-6 T 22-04-2016 SII_RS07080 771b196ed8da1458d979691bc478a778 945 PRINTS PR00449 Transforming protein P21 ras signature 489 511 9.3E-6 T 22-04-2016 SII_RS07080 771b196ed8da1458d979691bc478a778 945 PRINTS PR00449 Transforming protein P21 ras signature 588 610 9.3E-6 T 22-04-2016 SII_RS07080 771b196ed8da1458d979691bc478a778 945 Gene3D G3DSA:3.40.50.10050 747 825 4.4E-27 T 22-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 SII_RS07080 771b196ed8da1458d979691bc478a778 945 ProSitePatterns PS01176 Initiation factor 2 signature. 898 920 - T 22-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 SII_RS07080 771b196ed8da1458d979691bc478a778 945 Gene3D G3DSA:3.40.50.300 447 607 1.1E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS07020 fa82c8a32960d9ff281af48b4122ab22 85 PANTHER PTHR37300:SF1 1 78 3.4E-38 T 22-04-2016 SII_RS07020 fa82c8a32960d9ff281af48b4122ab22 85 PANTHER PTHR37300 1 78 3.4E-38 T 22-04-2016 SII_RS07020 fa82c8a32960d9ff281af48b4122ab22 85 Pfam PF05979 Bacterial protein of unknown function (DUF896) 4 67 4.2E-30 T 22-04-2016 IPR009242 Protein of unknown function DUF896 SII_RS07020 fa82c8a32960d9ff281af48b4122ab22 85 Gene3D G3DSA:1.10.287.540 1 59 2.4E-28 T 22-04-2016 IPR023218 UPF0291 structural domain SII_RS07020 fa82c8a32960d9ff281af48b4122ab22 85 Hamap MF_01103 UPF0291 protein . 1 59 16.42 T 22-04-2016 IPR009242 Protein of unknown function DUF896 SII_RS07020 fa82c8a32960d9ff281af48b4122ab22 85 SUPERFAMILY SSF158221 2 41 1.44E-13 T 22-04-2016 SII_RS05305 dfb9e4e4693ba370387603eb524983a6 252 Gene3D G3DSA:3.20.20.70 3 250 1.5E-101 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SII_RS05305 dfb9e4e4693ba370387603eb524983a6 252 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 3 251 39.651 T 22-04-2016 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 SII_RS05305 dfb9e4e4693ba370387603eb524983a6 252 SUPERFAMILY SSF51351 1 250 1.13E-89 T 22-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 SII_RS05305 dfb9e4e4693ba370387603eb524983a6 252 PANTHER PTHR21139 1 251 2.3E-118 T 22-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 SII_RS05305 dfb9e4e4693ba370387603eb524983a6 252 Pfam PF00121 Triosephosphate isomerase 6 247 1.1E-90 T 22-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 SII_RS05305 dfb9e4e4693ba370387603eb524983a6 252 ProSitePatterns PS00171 Triosephosphate isomerase active site. 166 176 - T 22-04-2016 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 SII_RS05305 dfb9e4e4693ba370387603eb524983a6 252 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 6 242 6.7E-58 T 22-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 SII_RS09120 97da5deb411490a83c02219595d7b533 584 PANTHER PTHR22594 364 566 1.1E-244 T 22-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SII_RS09120 97da5deb411490a83c02219595d7b533 584 PANTHER PTHR22594 1 300 1.1E-244 T 22-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SII_RS09120 97da5deb411490a83c02219595d7b533 584 Pfam PF01336 OB-fold nucleic acid binding domain 20 103 1.6E-16 T 22-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 SII_RS09120 97da5deb411490a83c02219595d7b533 584 PRINTS PR01042 Aspartyl-tRNA synthetase signature 469 485 9.0E-24 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SII_RS09120 97da5deb411490a83c02219595d7b533 584 PRINTS PR01042 Aspartyl-tRNA synthetase signature 210 223 9.0E-24 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SII_RS09120 97da5deb411490a83c02219595d7b533 584 PRINTS PR01042 Aspartyl-tRNA synthetase signature 513 527 9.0E-24 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SII_RS09120 97da5deb411490a83c02219595d7b533 584 PRINTS PR01042 Aspartyl-tRNA synthetase signature 193 205 9.0E-24 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SII_RS09120 97da5deb411490a83c02219595d7b533 584 PANTHER PTHR22594:SF5 364 566 1.1E-244 T 22-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 SII_RS09120 97da5deb411490a83c02219595d7b533 584 PANTHER PTHR22594:SF5 1 300 1.1E-244 T 22-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 SII_RS09120 97da5deb411490a83c02219595d7b533 584 Gene3D G3DSA:2.40.50.140 2 108 7.5E-38 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SII_RS09120 97da5deb411490a83c02219595d7b533 584 SUPERFAMILY SSF55681 419 578 4.21E-103 T 22-04-2016 SII_RS09120 97da5deb411490a83c02219595d7b533 584 SUPERFAMILY SSF55681 117 295 4.21E-103 T 22-04-2016 SII_RS09120 97da5deb411490a83c02219595d7b533 584 Gene3D G3DSA:3.30.1360.30 280 408 3.5E-49 T 22-04-2016 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 SII_RS09120 97da5deb411490a83c02219595d7b533 584 SUPERFAMILY SSF55261 292 414 5.89E-38 T 22-04-2016 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 SII_RS09120 97da5deb411490a83c02219595d7b533 584 Pfam PF02938 GAD domain 313 400 4.5E-25 T 22-04-2016 IPR029351 GAD domain SII_RS09120 97da5deb411490a83c02219595d7b533 584 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 1 578 6.3E-234 T 22-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 SII_RS09120 97da5deb411490a83c02219595d7b533 584 Gene3D G3DSA:3.30.930.10 409 579 5.1E-110 T 22-04-2016 SII_RS09120 97da5deb411490a83c02219595d7b533 584 Gene3D G3DSA:3.30.930.10 134 279 5.1E-110 T 22-04-2016 SII_RS09120 97da5deb411490a83c02219595d7b533 584 Hamap MF_00044 Aspartate--tRNA(Asp) ligase [aspS]. 2 558 35.464 T 22-04-2016 SII_RS09120 97da5deb411490a83c02219595d7b533 584 Pfam PF00152 tRNA synthetases class II (D, K and N) 121 552 5.2E-105 T 22-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SII_RS09120 97da5deb411490a83c02219595d7b533 584 SUPERFAMILY SSF50249 2 110 2.48E-30 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SII_RS08880 be4cc3a784b1af4973a7421986f87e35 325 PANTHER PTHR22916:SF24 1 324 4.6E-50 T 22-04-2016 SII_RS08880 be4cc3a784b1af4973a7421986f87e35 325 Pfam PF00535 Glycosyl transferase family 2 4 130 9.4E-36 T 22-04-2016 IPR001173 Glycosyltransferase 2-like SII_RS08880 be4cc3a784b1af4973a7421986f87e35 325 SUPERFAMILY SSF53448 2 222 6.28E-55 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SII_RS08880 be4cc3a784b1af4973a7421986f87e35 325 Gene3D G3DSA:3.90.550.10 1 199 2.9E-63 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SII_RS08880 be4cc3a784b1af4973a7421986f87e35 325 PANTHER PTHR22916 1 324 4.6E-50 T 22-04-2016 SII_RS08410 fc05953c1807da562fdb7067742d4289 145 Pfam PF15980 Putative Competence protein ComGF 38 134 7.3E-24 T 22-04-2016 IPR016977 Competence operon G, ComGF SII_RS08410 fc05953c1807da562fdb7067742d4289 145 PIRSF PIRSF031611 1 145 1.7E-56 T 22-04-2016 IPR016977 Competence operon G, ComGF SII_RS07665 2f8b614958238d2aaec8871446b8861e 178 SUPERFAMILY SSF51064 130 177 3.66E-14 T 22-04-2016 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 SII_RS07665 2f8b614958238d2aaec8871446b8861e 178 Pfam PF01025 GrpE 20 177 9.2E-46 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 SII_RS07665 2f8b614958238d2aaec8871446b8861e 178 PRINTS PR00773 GrpE protein signature 129 144 1.4E-24 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 SII_RS07665 2f8b614958238d2aaec8871446b8861e 178 PRINTS PR00773 GrpE protein signature 157 176 1.4E-24 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 SII_RS07665 2f8b614958238d2aaec8871446b8861e 178 PRINTS PR00773 GrpE protein signature 79 94 1.4E-24 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 SII_RS07665 2f8b614958238d2aaec8871446b8861e 178 PRINTS PR00773 GrpE protein signature 51 67 1.4E-24 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 SII_RS07665 2f8b614958238d2aaec8871446b8861e 178 Hamap MF_01151 Protein GrpE [grpE]. 6 178 18.897 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 SII_RS07665 2f8b614958238d2aaec8871446b8861e 178 SUPERFAMILY SSF58014 32 122 7.19E-21 T 22-04-2016 SII_RS07665 2f8b614958238d2aaec8871446b8861e 178 Gene3D G3DSA:2.30.22.10 122 177 2.4E-23 T 22-04-2016 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 SII_RS07665 2f8b614958238d2aaec8871446b8861e 178 PANTHER PTHR21237 18 176 1.7E-46 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 SII_RS07665 2f8b614958238d2aaec8871446b8861e 178 Gene3D G3DSA:3.90.20.20 27 120 1.4E-24 T 22-04-2016 IPR013805 GrpE nucleotide exchange factor, coiled-coil SII_RS07665 2f8b614958238d2aaec8871446b8861e 178 ProSitePatterns PS01071 grpE protein signature. 132 176 - T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 SII_RS08080 2eb6de96c6d0a365189157bee7ca8b15 1235 SUPERFAMILY SSF49452 247 356 1.8E-31 T 22-04-2016 IPR013784 Carbohydrate-binding-like fold GO:0030246 SII_RS08080 2eb6de96c6d0a365189157bee7ca8b15 1235 Pfam PF00128 Alpha amylase, catalytic domain 764 956 3.9E-5 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 SII_RS08080 2eb6de96c6d0a365189157bee7ca8b15 1235 Pfam PF00128 Alpha amylase, catalytic domain 620 727 4.2E-17 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 SII_RS08080 2eb6de96c6d0a365189157bee7ca8b15 1235 PANTHER PTHR10357:SF99 996 1146 8.6E-138 T 22-04-2016 SII_RS08080 2eb6de96c6d0a365189157bee7ca8b15 1235 PANTHER PTHR10357:SF99 855 965 8.6E-138 T 22-04-2016 SII_RS08080 2eb6de96c6d0a365189157bee7ca8b15 1235 PANTHER PTHR10357:SF99 386 833 8.6E-138 T 22-04-2016 SII_RS08080 2eb6de96c6d0a365189157bee7ca8b15 1235 SUPERFAMILY SSF51445 570 956 1.74E-105 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily SII_RS08080 2eb6de96c6d0a365189157bee7ca8b15 1235 SUPERFAMILY SSF51445 991 1041 1.74E-105 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily SII_RS08080 2eb6de96c6d0a365189157bee7ca8b15 1235 TIGRFAM TIGR02102 pullulan_Gpos: pullulanase, extracellular 138 1233 0.0 T 22-04-2016 IPR011838 Pullulanase, extracellular SII_RS08080 2eb6de96c6d0a365189157bee7ca8b15 1235 SMART SM00642 598 983 5.4E-9 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 SII_RS08080 2eb6de96c6d0a365189157bee7ca8b15 1235 Gene3D G3DSA:2.60.40.10 456 597 2.8E-18 T 22-04-2016 IPR013783 Immunoglobulin-like fold SII_RS08080 2eb6de96c6d0a365189157bee7ca8b15 1235 Pfam PF03714 Bacterial pullanase-associated domain 253 352 1.5E-15 T 22-04-2016 IPR005323 Bacterial pullanase-associated domain GO:0005975|GO:0030246 SII_RS08080 2eb6de96c6d0a365189157bee7ca8b15 1235 Pfam PF03714 Bacterial pullanase-associated domain 143 240 4.7E-13 T 22-04-2016 IPR005323 Bacterial pullanase-associated domain GO:0005975|GO:0030246 SII_RS08080 2eb6de96c6d0a365189157bee7ca8b15 1235 SUPERFAMILY SSF81296 453 579 9.52E-17 T 22-04-2016 IPR014756 Immunoglobulin E-set SII_RS08080 2eb6de96c6d0a365189157bee7ca8b15 1235 Gene3D G3DSA:3.20.20.80 598 1042 1.9E-112 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 SII_RS08080 2eb6de96c6d0a365189157bee7ca8b15 1235 PANTHER PTHR10357 996 1146 8.6E-138 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 SII_RS08080 2eb6de96c6d0a365189157bee7ca8b15 1235 PANTHER PTHR10357 855 965 8.6E-138 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 SII_RS08080 2eb6de96c6d0a365189157bee7ca8b15 1235 PANTHER PTHR10357 386 833 8.6E-138 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 SII_RS08080 2eb6de96c6d0a365189157bee7ca8b15 1235 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 457 545 3.3E-11 T 22-04-2016 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 SII_RS08080 2eb6de96c6d0a365189157bee7ca8b15 1235 SUPERFAMILY SSF49452 140 244 1.64E-27 T 22-04-2016 IPR013784 Carbohydrate-binding-like fold GO:0030246 SII_RS06765 5bdcaa2e6b487bc8a5445597087cde8d 173 PIRSF PIRSF021290 1 173 3.1E-63 T 22-04-2016 IPR010697 Protein of unknown function DUF1273 SII_RS06765 5bdcaa2e6b487bc8a5445597087cde8d 173 Hamap MF_01575 UPF0398 protein . 1 171 33.73 T 22-04-2016 IPR010697 Protein of unknown function DUF1273 SII_RS06765 5bdcaa2e6b487bc8a5445597087cde8d 173 PANTHER PTHR38440 2 173 1.4E-37 T 22-04-2016 SII_RS06765 5bdcaa2e6b487bc8a5445597087cde8d 173 SUPERFAMILY SSF102405 2 170 5.68E-52 T 22-04-2016 SII_RS06765 5bdcaa2e6b487bc8a5445597087cde8d 173 Pfam PF06908 Protein of unknown function (DUF1273) 4 165 2.1E-60 T 22-04-2016 IPR010697 Protein of unknown function DUF1273 SII_RS06765 5bdcaa2e6b487bc8a5445597087cde8d 173 Gene3D G3DSA:3.40.50.450 3 172 4.3E-57 T 22-04-2016 SII_RS08325 97f89f8c5f22a53e0711fa2f5268a5d7 161 SUPERFAMILY SSF55804 6 147 1.11E-32 T 22-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 SII_RS08325 97f89f8c5f22a53e0711fa2f5268a5d7 161 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 7 147 5.0E-33 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SII_RS08325 97f89f8c5f22a53e0711fa2f5268a5d7 161 Gene3D G3DSA:3.40.930.10 6 152 1.4E-51 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SII_RS08325 97f89f8c5f22a53e0711fa2f5268a5d7 161 PANTHER PTHR30505 1 156 1.9E-43 T 22-04-2016 SII_RS08325 97f89f8c5f22a53e0711fa2f5268a5d7 161 PANTHER PTHR30505:SF10 1 156 1.9E-43 T 22-04-2016 SII_RS05785 cccca772c2dcdf57c6a31102d687c7a0 600 Pfam PF08439 Oligopeptidase F 112 181 8.7E-23 T 22-04-2016 IPR013647 Oligopeptidase F, N-terminal domain SII_RS05785 cccca772c2dcdf57c6a31102d687c7a0 600 TIGRFAM TIGR00181 pepF: oligoendopeptidase F 5 592 1.6E-181 T 22-04-2016 IPR004438 Peptidase M3B, oligoendopeptidase F GO:0004222|GO:0006508 SII_RS05785 cccca772c2dcdf57c6a31102d687c7a0 600 PANTHER PTHR11804:SF8 143 596 1.1E-115 T 22-04-2016 SII_RS05785 cccca772c2dcdf57c6a31102d687c7a0 600 Gene3D G3DSA:3.40.390.10 313 422 7.5E-5 T 22-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 SII_RS05785 cccca772c2dcdf57c6a31102d687c7a0 600 PANTHER PTHR11804 143 596 1.1E-115 T 22-04-2016 SII_RS05785 cccca772c2dcdf57c6a31102d687c7a0 600 Pfam PF01432 Peptidase family M3 202 581 2.0E-82 T 22-04-2016 IPR001567 Peptidase M3A/M3B GO:0004222|GO:0006508 SII_RS05785 cccca772c2dcdf57c6a31102d687c7a0 600 Gene3D G3DSA:1.10.287.830 179 225 1.8E-18 T 22-04-2016 SII_RS05785 cccca772c2dcdf57c6a31102d687c7a0 600 SUPERFAMILY SSF55486 53 598 6.72E-128 T 22-04-2016 SII_RS01295 a431274d3b9bf11ae4adb41b353b6b07 105 Pfam PF02255 PTS system, Lactose/Cellobiose specific IIA subunit 8 100 2.4E-36 T 22-04-2016 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SII_RS01295 a431274d3b9bf11ae4adb41b353b6b07 105 Gene3D G3DSA:1.20.58.80 3 103 1.5E-39 T 22-04-2016 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SII_RS01295 a431274d3b9bf11ae4adb41b353b6b07 105 SUPERFAMILY SSF46973 3 100 3.92E-36 T 22-04-2016 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SII_RS01295 a431274d3b9bf11ae4adb41b353b6b07 105 PIRSF PIRSF000699 1 105 5.7E-37 T 22-04-2016 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SII_RS01295 a431274d3b9bf11ae4adb41b353b6b07 105 PANTHER PTHR34382 1 105 5.7E-37 T 22-04-2016 SII_RS03615 b20dfd7abfb817b40b70057707103d78 209 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 209 29.837 T 22-04-2016 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|UniPathway: UPA00070 SII_RS03615 b20dfd7abfb817b40b70057707103d78 209 Pfam PF00156 Phosphoribosyl transferase domain 58 160 1.4E-15 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 SII_RS03615 b20dfd7abfb817b40b70057707103d78 209 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 17 178 2.6E-45 T 22-04-2016 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|UniPathway: UPA00070 SII_RS03615 b20dfd7abfb817b40b70057707103d78 209 Gene3D G3DSA:3.40.50.2020 3 208 6.8E-57 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like SII_RS03615 b20dfd7abfb817b40b70057707103d78 209 SUPERFAMILY SSF53271 9 208 9.96E-49 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like SII_RS03615 b20dfd7abfb817b40b70057707103d78 209 PANTHER PTHR19278 3 200 2.3E-62 T 22-04-2016 SII_RS06415 4e743e0732f194cf52950d6167431111 446 Pfam PF00571 CBS domain 218 271 6.9E-6 T 22-04-2016 IPR000644 CBS domain SII_RS06415 4e743e0732f194cf52950d6167431111 446 Pfam PF00571 CBS domain 289 337 0.0011 T 22-04-2016 IPR000644 CBS domain SII_RS06415 4e743e0732f194cf52950d6167431111 446 SUPERFAMILY SSF54631 203 340 7.33E-30 T 22-04-2016 SII_RS06415 4e743e0732f194cf52950d6167431111 446 PANTHER PTHR22777 2 445 3.4E-189 T 22-04-2016 SII_RS06415 4e743e0732f194cf52950d6167431111 446 Pfam PF01595 Domain of unknown function DUF21 15 200 3.2E-47 T 22-04-2016 IPR002550 Domain of unknown function DUF21 SII_RS06415 4e743e0732f194cf52950d6167431111 446 Gene3D G3DSA:3.30.465.10 351 434 1.2E-23 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 SII_RS06415 4e743e0732f194cf52950d6167431111 446 Pfam PF03471 Transporter associated domain 353 434 9.5E-16 T 22-04-2016 IPR005170 Transporter-associated domain SII_RS06415 4e743e0732f194cf52950d6167431111 446 Gene3D G3DSA:3.10.580.10 203 350 1.3E-16 T 22-04-2016 SII_RS06415 4e743e0732f194cf52950d6167431111 446 SUPERFAMILY SSF56176 353 433 3.82E-17 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 SII_RS06415 4e743e0732f194cf52950d6167431111 446 SMART SM01091 352 436 7.9E-14 T 22-04-2016 IPR005170 Transporter-associated domain SII_RS06415 4e743e0732f194cf52950d6167431111 446 PANTHER PTHR22777:SF8 2 445 3.4E-189 T 22-04-2016 SII_RS09015 e07705cb5beaff089b0cd896a42e69bb 196 SUPERFAMILY SSF50249 1 62 1.37E-15 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SII_RS09015 e07705cb5beaff089b0cd896a42e69bb 196 SUPERFAMILY SSF47781 65 133 8.34E-19 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 SII_RS09015 e07705cb5beaff089b0cd896a42e69bb 196 Pfam PF07499 RuvA, C-terminal domain 152 193 1.8E-7 T 22-04-2016 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 SII_RS09015 e07705cb5beaff089b0cd896a42e69bb 196 Gene3D G3DSA:1.10.150.20 66 134 2.7E-26 T 22-04-2016 SII_RS09015 e07705cb5beaff089b0cd896a42e69bb 196 Gene3D G3DSA:2.40.50.140 1 65 2.5E-22 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SII_RS09015 e07705cb5beaff089b0cd896a42e69bb 196 Pfam PF01330 RuvA N terminal domain 1 61 1.1E-18 T 22-04-2016 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 SII_RS09015 e07705cb5beaff089b0cd896a42e69bb 196 PANTHER PTHR33796 2 196 5.6E-68 T 22-04-2016 SII_RS09015 e07705cb5beaff089b0cd896a42e69bb 196 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 195 29.485 T 22-04-2016 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 SII_RS09015 e07705cb5beaff089b0cd896a42e69bb 196 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 195 6.6E-49 T 22-04-2016 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 SII_RS09015 e07705cb5beaff089b0cd896a42e69bb 196 Pfam PF14520 Helix-hairpin-helix domain 71 127 1.8E-12 T 22-04-2016 SII_RS09015 e07705cb5beaff089b0cd896a42e69bb 196 Gene3D G3DSA:1.10.8.10 149 194 1.7E-11 T 22-04-2016 SII_RS09015 e07705cb5beaff089b0cd896a42e69bb 196 SUPERFAMILY SSF46929 149 194 4.97E-9 T 22-04-2016 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 SII_RS09015 e07705cb5beaff089b0cd896a42e69bb 196 SMART SM00278 107 126 88.0 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 SII_RS09015 e07705cb5beaff089b0cd896a42e69bb 196 SMART SM00278 72 91 3.1 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 SII_RS00505 a06d5234ccc2f2a94af90c4f55b4d62a 274 Gene3D G3DSA:3.40.50.10490 60 256 3.4E-35 T 22-04-2016 SII_RS00505 a06d5234ccc2f2a94af90c4f55b4d62a 274 SUPERFAMILY SSF46689 3 73 1.4E-16 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SII_RS00505 a06d5234ccc2f2a94af90c4f55b4d62a 274 Pfam PF01418 Helix-turn-helix domain, rpiR family 3 69 1.0E-16 T 22-04-2016 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 SII_RS00505 a06d5234ccc2f2a94af90c4f55b4d62a 274 PANTHER PTHR30514:SF1 1 257 4.5E-64 T 22-04-2016 SII_RS00505 a06d5234ccc2f2a94af90c4f55b4d62a 274 SUPERFAMILY SSF53697 88 263 5.63E-40 T 22-04-2016 SII_RS00505 a06d5234ccc2f2a94af90c4f55b4d62a 274 Pfam PF01380 SIS domain 119 248 1.2E-25 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 SII_RS00505 a06d5234ccc2f2a94af90c4f55b4d62a 274 Gene3D G3DSA:1.10.10.10 3 59 4.9E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SII_RS00505 a06d5234ccc2f2a94af90c4f55b4d62a 274 PANTHER PTHR30514 1 257 4.5E-64 T 22-04-2016 SII_RS08125 4b1b22f4bcf3b02f89c0586830307706 247 Gene3D G3DSA:3.40.1280.10 1 245 1.4E-73 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal SII_RS08125 4b1b22f4bcf3b02f89c0586830307706 247 Pfam PF04452 RNA methyltransferase 17 240 2.8E-69 T 22-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SII_RS08125 4b1b22f4bcf3b02f89c0586830307706 247 PANTHER PTHR30027 1 247 8.5E-77 T 22-04-2016 SII_RS08125 4b1b22f4bcf3b02f89c0586830307706 247 PANTHER PTHR30027:SF3 1 247 8.5E-77 T 22-04-2016 SII_RS08125 4b1b22f4bcf3b02f89c0586830307706 247 PIRSF PIRSF015601 1 246 7.8E-52 T 22-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SII_RS08125 4b1b22f4bcf3b02f89c0586830307706 247 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 13 244 1.3E-51 T 22-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SII_RS08125 4b1b22f4bcf3b02f89c0586830307706 247 SUPERFAMILY SSF88697 3 61 2.73E-11 T 22-04-2016 IPR015947 PUA-like domain SII_RS08125 4b1b22f4bcf3b02f89c0586830307706 247 SUPERFAMILY SSF75217 69 244 9.16E-53 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases SII_RS04810 935f5a3fe961c59cc473e9eea9f9a8a6 233 PANTHER PTHR26402 2 232 1.0E-104 T 22-04-2016 SII_RS04810 935f5a3fe961c59cc473e9eea9f9a8a6 233 SMART SM00448 2 112 8.1E-45 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SII_RS04810 935f5a3fe961c59cc473e9eea9f9a8a6 233 PANTHER PTHR26402:SF614 2 232 1.0E-104 T 22-04-2016 SII_RS04810 935f5a3fe961c59cc473e9eea9f9a8a6 233 SUPERFAMILY SSF52172 1 127 2.13E-41 T 22-04-2016 IPR011006 CheY-like superfamily SII_RS04810 935f5a3fe961c59cc473e9eea9f9a8a6 233 Gene3D G3DSA:3.40.50.2300 2 125 3.8E-41 T 22-04-2016 SII_RS04810 935f5a3fe961c59cc473e9eea9f9a8a6 233 Pfam PF00486 Transcriptional regulatory protein, C terminal 153 228 2.1E-27 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SII_RS04810 935f5a3fe961c59cc473e9eea9f9a8a6 233 SMART SM00862 153 229 4.6E-27 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SII_RS04810 935f5a3fe961c59cc473e9eea9f9a8a6 233 Pfam PF00072 Response regulator receiver domain 4 112 1.0E-28 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SII_RS04810 935f5a3fe961c59cc473e9eea9f9a8a6 233 Gene3D G3DSA:1.10.10.10 131 231 1.8E-34 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SII_RS04810 935f5a3fe961c59cc473e9eea9f9a8a6 233 SUPERFAMILY SSF46894 129 230 2.32E-30 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SII_RS02800 73d61cddb004be7ddec722fab302ae5b 298 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 127 141 - T 22-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 SII_RS02800 73d61cddb004be7ddec722fab302ae5b 298 SUPERFAMILY SSF55120 71 294 1.26E-68 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 SII_RS02800 73d61cddb004be7ddec722fab302ae5b 298 Pfam PF00849 RNA pseudouridylate synthase 84 235 9.2E-33 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 SII_RS02800 73d61cddb004be7ddec722fab302ae5b 298 PANTHER PTHR11079 21 298 5.9E-83 T 22-04-2016 SII_RS02800 73d61cddb004be7ddec722fab302ae5b 298 PANTHER PTHR11079:SF73 21 298 5.9E-83 T 22-04-2016 SII_RS02800 73d61cddb004be7ddec722fab302ae5b 298 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 20 293 3.3E-71 T 22-04-2016 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 SII_RS07095 70b358031821ca7f43f8909962494c71 397 PANTHER PTHR22648 1 364 4.4E-143 T 22-04-2016 SII_RS07095 70b358031821ca7f43f8909962494c71 397 Pfam PF08529 NusA N-terminal domain 4 123 3.5E-32 T 22-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 SII_RS07095 70b358031821ca7f43f8909962494c71 397 SUPERFAMILY SSF54814 292 357 1.9E-16 T 22-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 SII_RS07095 70b358031821ca7f43f8909962494c71 397 Pfam PF13184 NusA-like KH domain 229 310 6.3E-29 T 22-04-2016 IPR025249 KH domain, NusA-like GO:0003723 SII_RS07095 70b358031821ca7f43f8909962494c71 397 Gene3D G3DSA:3.30.1480.10 1 123 1.1E-40 T 22-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 SII_RS07095 70b358031821ca7f43f8909962494c71 397 PANTHER PTHR22648:SF0 1 364 4.4E-143 T 22-04-2016 SII_RS07095 70b358031821ca7f43f8909962494c71 397 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 2 393 27.187 T 22-04-2016 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 SII_RS07095 70b358031821ca7f43f8909962494c71 397 Gene3D G3DSA:2.40.50.140 128 197 1.8E-25 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SII_RS07095 70b358031821ca7f43f8909962494c71 397 SMART SM00322 229 306 1.7 T 22-04-2016 IPR004087 K Homology domain GO:0003676 SII_RS07095 70b358031821ca7f43f8909962494c71 397 SMART SM00322 315 373 0.48 T 22-04-2016 IPR004087 K Homology domain GO:0003676 SII_RS07095 70b358031821ca7f43f8909962494c71 397 SUPERFAMILY SSF50249 131 198 7.15E-16 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SII_RS07095 70b358031821ca7f43f8909962494c71 397 Gene3D G3DSA:3.30.300.20 292 360 7.4E-32 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta SII_RS07095 70b358031821ca7f43f8909962494c71 397 SUPERFAMILY SSF69705 1 124 5.1E-36 T 22-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 SII_RS07095 70b358031821ca7f43f8909962494c71 397 Gene3D G3DSA:3.30.300.20 198 289 2.6E-28 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta SII_RS07095 70b358031821ca7f43f8909962494c71 397 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 4 356 3.3E-111 T 22-04-2016 IPR010213 Transcription termination factor NusA GO:0003723 SII_RS07095 70b358031821ca7f43f8909962494c71 397 SUPERFAMILY SSF54814 199 271 1.05E-21 T 22-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 SII_RS03805 310afb050bbc1350e8f9b59ead35d3de 147 Pfam PF04138 GtrA-like protein 16 141 5.0E-23 T 22-04-2016 IPR007267 GtrA-like protein GO:0000271|GO:0006810|GO:0016021 SII_RS03805 310afb050bbc1350e8f9b59ead35d3de 147 PANTHER PTHR38459 1 146 6.9E-24 T 22-04-2016 SII_RS08685 573448cbe2d9c9a42b4c83bc567b75ad 212 TIGRFAM TIGR01351 adk: adenylate kinase 2 208 3.2E-73 T 22-04-2016 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 SII_RS08685 573448cbe2d9c9a42b4c83bc567b75ad 212 Hamap MF_00235 Adenylate kinase [adk]. 1 209 48.393 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 SII_RS08685 573448cbe2d9c9a42b4c83bc567b75ad 212 PRINTS PR00094 Adenylate kinase signature 4 17 5.9E-30 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 SII_RS08685 573448cbe2d9c9a42b4c83bc567b75ad 212 PRINTS PR00094 Adenylate kinase signature 32 46 5.9E-30 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 SII_RS08685 573448cbe2d9c9a42b4c83bc567b75ad 212 PRINTS PR00094 Adenylate kinase signature 156 171 5.9E-30 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 SII_RS08685 573448cbe2d9c9a42b4c83bc567b75ad 212 PRINTS PR00094 Adenylate kinase signature 82 98 5.9E-30 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 SII_RS08685 573448cbe2d9c9a42b4c83bc567b75ad 212 PRINTS PR00094 Adenylate kinase signature 173 187 5.9E-30 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 SII_RS08685 573448cbe2d9c9a42b4c83bc567b75ad 212 SUPERFAMILY SSF52540 1 208 1.01E-38 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS08685 573448cbe2d9c9a42b4c83bc567b75ad 212 ProSitePatterns PS00113 Adenylate kinase signature. 82 93 - T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 SII_RS08685 573448cbe2d9c9a42b4c83bc567b75ad 212 PANTHER PTHR23359 1 208 2.5E-86 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 SII_RS08685 573448cbe2d9c9a42b4c83bc567b75ad 212 Pfam PF00406 Adenylate kinase 5 186 1.8E-55 T 22-04-2016 SII_RS08685 573448cbe2d9c9a42b4c83bc567b75ad 212 Gene3D G3DSA:3.40.50.300 1 208 3.1E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS02745 a6aa0e864d3881a98fc22f56feeb3955 217 PANTHER PTHR10010:SF14 1 216 3.9E-54 T 22-04-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 SII_RS02745 a6aa0e864d3881a98fc22f56feeb3955 217 PANTHER PTHR10010 1 216 3.9E-54 T 22-04-2016 SII_RS02745 a6aa0e864d3881a98fc22f56feeb3955 217 Gene3D G3DSA:1.20.58.220 3 109 2.1E-35 T 22-04-2016 SII_RS02745 a6aa0e864d3881a98fc22f56feeb3955 217 Pfam PF01895 PhoU domain 121 206 6.2E-17 T 22-04-2016 IPR026022 PhoU domain SII_RS02745 a6aa0e864d3881a98fc22f56feeb3955 217 Pfam PF01895 PhoU domain 19 104 1.3E-24 T 22-04-2016 IPR026022 PhoU domain SII_RS02745 a6aa0e864d3881a98fc22f56feeb3955 217 PIRSF PIRSF003107 1 217 2.8E-61 T 22-04-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 SII_RS02745 a6aa0e864d3881a98fc22f56feeb3955 217 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 5 215 1.4E-74 T 22-04-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 SII_RS02745 a6aa0e864d3881a98fc22f56feeb3955 217 SUPERFAMILY SSF109755 5 216 2.93E-64 T 22-04-2016 SII_RS02745 a6aa0e864d3881a98fc22f56feeb3955 217 Gene3D G3DSA:1.20.58.220 113 216 1.4E-29 T 22-04-2016 SII_RS02975 afc3bd5e791956e6880e71c3fc69051a 447 Pfam PF08245 Mur ligase middle domain 53 281 1.5E-14 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SII_RS02975 afc3bd5e791956e6880e71c3fc69051a 447 Pfam PF08353 Domain of unknown function (DUF1727) 319 429 1.4E-31 T 22-04-2016 IPR013564 Domain of unknown function DUF1727 SII_RS02975 afc3bd5e791956e6880e71c3fc69051a 447 Gene3D G3DSA:3.40.1190.10 223 298 1.3E-42 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SII_RS02975 afc3bd5e791956e6880e71c3fc69051a 447 Gene3D G3DSA:3.40.1190.10 39 189 1.3E-42 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SII_RS02975 afc3bd5e791956e6880e71c3fc69051a 447 PANTHER PTHR23135 31 223 7.1E-136 T 22-04-2016 SII_RS02975 afc3bd5e791956e6880e71c3fc69051a 447 PANTHER PTHR23135 253 447 7.1E-136 T 22-04-2016 SII_RS02975 afc3bd5e791956e6880e71c3fc69051a 447 PANTHER PTHR23135:SF7 31 223 7.1E-136 T 22-04-2016 SII_RS02975 afc3bd5e791956e6880e71c3fc69051a 447 PANTHER PTHR23135:SF7 253 447 7.1E-136 T 22-04-2016 SII_RS02975 afc3bd5e791956e6880e71c3fc69051a 447 SUPERFAMILY SSF53623 39 190 6.87E-34 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SII_RS02975 afc3bd5e791956e6880e71c3fc69051a 447 SUPERFAMILY SSF53623 224 296 6.87E-34 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SII_RS01520 48b5c3eda9e6483455e96e0449e2aa18 353 Gene3D G3DSA:3.90.230.10 126 353 5.9E-81 T 22-04-2016 IPR000994 Peptidase M24, structural domain SII_RS01520 48b5c3eda9e6483455e96e0449e2aa18 353 Pfam PF01321 Creatinase/Prolidase N-terminal domain 4 127 7.6E-24 T 22-04-2016 IPR000587 Creatinase, N-terminal GO:0016787 SII_RS01520 48b5c3eda9e6483455e96e0449e2aa18 353 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 284 296 - T 22-04-2016 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site SII_RS01520 48b5c3eda9e6483455e96e0449e2aa18 353 PANTHER PTHR10804 26 352 9.2E-90 T 22-04-2016 SII_RS01520 48b5c3eda9e6483455e96e0449e2aa18 353 SUPERFAMILY SSF55920 97 348 5.89E-77 T 22-04-2016 IPR000994 Peptidase M24, structural domain SII_RS01520 48b5c3eda9e6483455e96e0449e2aa18 353 PANTHER PTHR10804:SF86 26 352 9.2E-90 T 22-04-2016 SII_RS01520 48b5c3eda9e6483455e96e0449e2aa18 353 SUPERFAMILY SSF53092 11 127 1.74E-26 T 22-04-2016 IPR028980 Creatinase/Aminopeptidase P, N-terminal SII_RS01520 48b5c3eda9e6483455e96e0449e2aa18 353 Pfam PF00557 Metallopeptidase family M24 135 337 6.3E-61 T 22-04-2016 IPR000994 Peptidase M24, structural domain SII_RS01520 48b5c3eda9e6483455e96e0449e2aa18 353 Gene3D G3DSA:3.40.350.10 2 125 8.1E-29 T 22-04-2016 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal SII_RS07320 5b4f89d1434e16ffaae89aae65ee5921 274 SMART SM00062 37 265 3.4E-43 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SII_RS07320 5b4f89d1434e16ffaae89aae65ee5921 274 SUPERFAMILY SSF53850 6 265 2.38E-46 T 22-04-2016 SII_RS07320 5b4f89d1434e16ffaae89aae65ee5921 274 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 38 263 6.9E-47 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SII_RS07320 5b4f89d1434e16ffaae89aae65ee5921 274 Gene3D G3DSA:3.40.190.10 115 224 1.2E-19 T 22-04-2016 SII_RS07320 5b4f89d1434e16ffaae89aae65ee5921 274 PANTHER PTHR18966 35 263 1.5E-22 T 22-04-2016 SII_RS07320 5b4f89d1434e16ffaae89aae65ee5921 274 Gene3D G3DSA:3.40.190.10 36 114 5.3E-26 T 22-04-2016 SII_RS07320 5b4f89d1434e16ffaae89aae65ee5921 274 Gene3D G3DSA:3.40.190.10 225 265 5.3E-26 T 22-04-2016 SII_RS07320 5b4f89d1434e16ffaae89aae65ee5921 274 PANTHER PTHR18966:SF208 35 263 1.5E-22 T 22-04-2016 SII_RS07960 5892a0e4d5996e04d68b6166f8d9b15b 447 SUPERFAMILY SSF52374 2 314 1.13E-100 T 22-04-2016 SII_RS07960 5892a0e4d5996e04d68b6166f8d9b15b 447 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 61 70 5.9E-29 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 SII_RS07960 5892a0e4d5996e04d68b6166f8d9b15b 447 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 224 245 5.9E-29 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 SII_RS07960 5892a0e4d5996e04d68b6166f8d9b15b 447 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 193 211 5.9E-29 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 SII_RS07960 5892a0e4d5996e04d68b6166f8d9b15b 447 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 25 36 5.9E-29 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 SII_RS07960 5892a0e4d5996e04d68b6166f8d9b15b 447 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 15 314 2.5E-130 T 22-04-2016 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 SII_RS07960 5892a0e4d5996e04d68b6166f8d9b15b 447 PANTHER PTHR10890 1 444 6.0E-220 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 SII_RS07960 5892a0e4d5996e04d68b6166f8d9b15b 447 Pfam PF09190 DALR domain 344 394 1.9E-15 T 22-04-2016 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 SII_RS07960 5892a0e4d5996e04d68b6166f8d9b15b 447 SMART SM00840 344 398 3.0E-13 T 22-04-2016 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 SII_RS07960 5892a0e4d5996e04d68b6166f8d9b15b 447 SUPERFAMILY SSF47323 330 446 3.01E-30 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SII_RS07960 5892a0e4d5996e04d68b6166f8d9b15b 447 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 2 446 3.9E-163 T 22-04-2016 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16|Reactome: REACT_71 SII_RS07960 5892a0e4d5996e04d68b6166f8d9b15b 447 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 2 447 37.11 T 22-04-2016 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16|Reactome: REACT_71 SII_RS07960 5892a0e4d5996e04d68b6166f8d9b15b 447 Gene3D G3DSA:3.40.50.620 19 307 2.6E-107 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SII_RS07960 5892a0e4d5996e04d68b6166f8d9b15b 447 Gene3D G3DSA:1.20.120.640 309 390 2.8E-14 T 22-04-2016 SII_RS08520 56cd032f55cc6aeb223492bd4d5e8b72 471 Pfam PF13481 AAA domain 77 231 3.0E-15 T 22-04-2016 SII_RS08520 56cd032f55cc6aeb223492bd4d5e8b72 471 Pfam PF13541 Subunit ChlI of Mg-chelatase 375 438 2.8E-9 T 22-04-2016 SII_RS08520 56cd032f55cc6aeb223492bd4d5e8b72 471 SMART SM00382 100 253 1.1E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain SII_RS08520 56cd032f55cc6aeb223492bd4d5e8b72 471 SUPERFAMILY SSF52540 78 300 2.77E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS08520 56cd032f55cc6aeb223492bd4d5e8b72 471 Gene3D G3DSA:3.40.50.300 68 285 3.0E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS08520 56cd032f55cc6aeb223492bd4d5e8b72 471 PANTHER PTHR32472 15 469 4.0E-215 T 22-04-2016 SII_RS08520 56cd032f55cc6aeb223492bd4d5e8b72 471 TIGRFAM TIGR00416 sms: DNA repair protein RadA 14 461 1.3E-191 T 22-04-2016 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 SII_RS08520 56cd032f55cc6aeb223492bd4d5e8b72 471 SUPERFAMILY SSF54211 264 278 2.39E-40 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SII_RS08520 56cd032f55cc6aeb223492bd4d5e8b72 471 SUPERFAMILY SSF54211 312 466 2.39E-40 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SII_RS08520 56cd032f55cc6aeb223492bd4d5e8b72 471 PRINTS PR01874 DNA repair protein radA signature 183 207 2.1E-87 T 22-04-2016 SII_RS08520 56cd032f55cc6aeb223492bd4d5e8b72 471 PRINTS PR01874 DNA repair protein radA signature 222 250 2.1E-87 T 22-04-2016 SII_RS08520 56cd032f55cc6aeb223492bd4d5e8b72 471 PRINTS PR01874 DNA repair protein radA signature 133 150 2.1E-87 T 22-04-2016 SII_RS08520 56cd032f55cc6aeb223492bd4d5e8b72 471 PRINTS PR01874 DNA repair protein radA signature 92 120 2.1E-87 T 22-04-2016 SII_RS08520 56cd032f55cc6aeb223492bd4d5e8b72 471 PRINTS PR01874 DNA repair protein radA signature 257 283 2.1E-87 T 22-04-2016 SII_RS08520 56cd032f55cc6aeb223492bd4d5e8b72 471 PRINTS PR01874 DNA repair protein radA signature 331 354 2.1E-87 T 22-04-2016 SII_RS08520 56cd032f55cc6aeb223492bd4d5e8b72 471 PRINTS PR01874 DNA repair protein radA signature 23 47 2.1E-87 T 22-04-2016 SII_RS08520 56cd032f55cc6aeb223492bd4d5e8b72 471 Gene3D G3DSA:3.30.230.10 297 465 1.3E-34 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SII_RS03525 0766089c11007d927c155529110e4171 311 Pfam PF08279 HTH domain 10 57 1.4E-15 T 22-04-2016 IPR013196 Helix-turn-helix, type 11 SII_RS03525 0766089c11007d927c155529110e4171 311 Hamap MF_00978 Bifunctional ligase/repressor BirA [birA]. 5 309 30.987 T 22-04-2016 IPR030855 Bifunctional ligase/repressor BirA GO:0004077|GO:0006355 KEGG: 00780+6.3.4.15 SII_RS03525 0766089c11007d927c155529110e4171 311 SUPERFAMILY SSF50037 263 308 8.24E-6 T 22-04-2016 IPR008988 Transcriptional repressor, C-terminal SII_RS03525 0766089c11007d927c155529110e4171 311 Gene3D G3DSA:3.30.930.10 71 246 1.9E-47 T 22-04-2016 SII_RS03525 0766089c11007d927c155529110e4171 311 SUPERFAMILY SSF46785 11 58 1.87E-11 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SII_RS03525 0766089c11007d927c155529110e4171 311 Gene3D G3DSA:1.10.10.10 1 61 1.8E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SII_RS03525 0766089c11007d927c155529110e4171 311 PANTHER PTHR12835 1 308 8.4E-61 T 22-04-2016 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 SII_RS03525 0766089c11007d927c155529110e4171 311 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 77 308 2.2E-43 T 22-04-2016 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 SII_RS03525 0766089c11007d927c155529110e4171 311 SUPERFAMILY SSF55681 71 247 1.56E-46 T 22-04-2016 SII_RS03525 0766089c11007d927c155529110e4171 311 Pfam PF02237 Biotin protein ligase C terminal domain 263 308 9.7E-9 T 22-04-2016 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15 SII_RS03525 0766089c11007d927c155529110e4171 311 Pfam PF03099 Biotin/lipoate A/B protein ligase family 96 207 6.2E-13 T 22-04-2016 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 SII_RS03525 0766089c11007d927c155529110e4171 311 Gene3D G3DSA:2.30.30.100 263 308 2.9E-9 T 22-04-2016 SII_RS03670 72a1d35ca943edc562ffdaa6c9816c67 165 PANTHER PTHR22881 20 80 5.4E-35 T 22-04-2016 SII_RS03670 72a1d35ca943edc562ffdaa6c9816c67 165 PANTHER PTHR22881 96 164 5.4E-35 T 22-04-2016 SII_RS03670 72a1d35ca943edc562ffdaa6c9816c67 165 Gene3D G3DSA:3.40.390.30 6 164 2.4E-44 T 22-04-2016 IPR023091 Metalloprotease catalytic domain, predicted GO:0004222 SII_RS03670 72a1d35ca943edc562ffdaa6c9816c67 165 SUPERFAMILY SSF55486 1 164 2.22E-40 T 22-04-2016 SII_RS03670 72a1d35ca943edc562ffdaa6c9816c67 165 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 130 140 - T 22-04-2016 IPR020549 Endoribonuclease YbeY, conserved site SII_RS03670 72a1d35ca943edc562ffdaa6c9816c67 165 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 37 161 5.9E-39 T 22-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 SII_RS03670 72a1d35ca943edc562ffdaa6c9816c67 165 Pfam PF02130 Uncharacterized protein family UPF0054 13 159 2.2E-40 T 22-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 SII_RS03670 72a1d35ca943edc562ffdaa6c9816c67 165 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 2 164 22.221 T 22-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 SII_RS02160 30b3137cb0c8d6acda53c3317d40e2e6 143 TIGRFAM TIGR00689 rpiB_lacA_lacB: sugar-phosphate isomerase, RpiB/LacA/LacB family 3 140 2.7E-29 T 22-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 SII_RS02160 30b3137cb0c8d6acda53c3317d40e2e6 143 SUPERFAMILY SSF89623 1 142 9.68E-36 T 22-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 SII_RS02160 30b3137cb0c8d6acda53c3317d40e2e6 143 Pfam PF02502 Ribose/Galactose Isomerase 3 139 1.2E-34 T 22-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 SII_RS02160 30b3137cb0c8d6acda53c3317d40e2e6 143 PANTHER PTHR30345 1 143 2.7E-41 T 22-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 SII_RS02160 30b3137cb0c8d6acda53c3317d40e2e6 143 PANTHER PTHR30345:SF5 1 143 2.7E-41 T 22-04-2016 SII_RS02160 30b3137cb0c8d6acda53c3317d40e2e6 143 PIRSF PIRSF005384 1 143 8.6E-35 T 22-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 SII_RS02160 30b3137cb0c8d6acda53c3317d40e2e6 143 Gene3D G3DSA:3.40.1400.10 1 142 4.0E-39 T 22-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 SII_RS05455 ae69198d4007521a8d9ff79cbb6c55a7 213 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 201 2.1E-42 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 SII_RS05455 ae69198d4007521a8d9ff79cbb6c55a7 213 Gene3D G3DSA:3.40.50.1240 1 208 6.5E-50 T 22-04-2016 IPR029033 Histidine phosphatase superfamily SII_RS05455 ae69198d4007521a8d9ff79cbb6c55a7 213 PANTHER PTHR23029 1 207 1.2E-37 T 22-04-2016 SII_RS05455 ae69198d4007521a8d9ff79cbb6c55a7 213 PANTHER PTHR23029:SF1 1 207 1.2E-37 T 22-04-2016 SII_RS05455 ae69198d4007521a8d9ff79cbb6c55a7 213 SUPERFAMILY SSF53254 1 208 3.2E-48 T 22-04-2016 IPR029033 Histidine phosphatase superfamily SII_RS05455 ae69198d4007521a8d9ff79cbb6c55a7 213 SMART SM00855 2 160 4.3E-15 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 SII_RS00660 efbb70bacccda101665c038b69c33183 260 PRINTS PR00395 Ribosomal protein S2 signature 196 210 3.5E-42 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SII_RS00660 efbb70bacccda101665c038b69c33183 260 PRINTS PR00395 Ribosomal protein S2 signature 37 46 3.5E-42 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SII_RS00660 efbb70bacccda101665c038b69c33183 260 PRINTS PR00395 Ribosomal protein S2 signature 158 175 3.5E-42 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SII_RS00660 efbb70bacccda101665c038b69c33183 260 PRINTS PR00395 Ribosomal protein S2 signature 175 186 3.5E-42 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SII_RS00660 efbb70bacccda101665c038b69c33183 260 PRINTS PR00395 Ribosomal protein S2 signature 87 104 3.5E-42 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SII_RS00660 efbb70bacccda101665c038b69c33183 260 PRINTS PR00395 Ribosomal protein S2 signature 6 24 3.5E-42 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SII_RS00660 efbb70bacccda101665c038b69c33183 260 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 3 226 1.3E-105 T 22-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 SII_RS00660 efbb70bacccda101665c038b69c33183 260 Gene3D G3DSA:3.40.50.10490 23 99 7.1E-69 T 22-04-2016 SII_RS00660 efbb70bacccda101665c038b69c33183 260 Gene3D G3DSA:3.40.50.10490 158 240 7.1E-69 T 22-04-2016 SII_RS00660 efbb70bacccda101665c038b69c33183 260 SUPERFAMILY SSF52313 6 231 4.71E-96 T 22-04-2016 IPR023591 Ribosomal protein S2, flavodoxin-like domain SII_RS00660 efbb70bacccda101665c038b69c33183 260 Pfam PF00318 Ribosomal protein S2 9 224 2.6E-97 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SII_RS00660 efbb70bacccda101665c038b69c33183 260 PANTHER PTHR12534 1 232 7.2E-122 T 22-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 SII_RS00660 efbb70bacccda101665c038b69c33183 260 Gene3D G3DSA:1.10.287.610 100 152 8.3E-26 T 22-04-2016 SII_RS00660 efbb70bacccda101665c038b69c33183 260 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 6 17 - T 22-04-2016 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 SII_RS00660 efbb70bacccda101665c038b69c33183 260 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 2 225 43.085 T 22-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 SII_RS04350 8b033afb0334916f00dd8f0dedb8ff58 393 Pfam PF00155 Aminotransferase class I and II 31 386 7.5E-70 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 SII_RS04350 8b033afb0334916f00dd8f0dedb8ff58 393 Gene3D G3DSA:3.90.1150.10 273 393 7.9E-44 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SII_RS04350 8b033afb0334916f00dd8f0dedb8ff58 393 PANTHER PTHR11751 13 393 2.2E-149 T 22-04-2016 SII_RS04350 8b033afb0334916f00dd8f0dedb8ff58 393 Gene3D G3DSA:3.40.640.10 44 272 3.6E-71 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SII_RS04350 8b033afb0334916f00dd8f0dedb8ff58 393 SUPERFAMILY SSF53383 1 392 1.77E-109 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SII_RS04350 8b033afb0334916f00dd8f0dedb8ff58 393 PANTHER PTHR11751:SF306 13 393 2.2E-149 T 22-04-2016 SII_RS04350 8b033afb0334916f00dd8f0dedb8ff58 393 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 235 248 - T 22-04-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Reactome: REACT_13 SII_RS09130 6723d885e0993ab7d577d77651b62787 426 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 1 419 33.898 T 22-04-2016 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21|Reactome: REACT_71 SII_RS09130 6723d885e0993ab7d577d77651b62787 426 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 4 408 3.5E-156 T 22-04-2016 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21|Reactome: REACT_71 SII_RS09130 6723d885e0993ab7d577d77651b62787 426 Gene3D G3DSA:3.30.930.10 1 185 6.4E-98 T 22-04-2016 SII_RS09130 6723d885e0993ab7d577d77651b62787 426 Gene3D G3DSA:3.30.930.10 221 321 6.4E-98 T 22-04-2016 SII_RS09130 6723d885e0993ab7d577d77651b62787 426 Pfam PF13393 Histidyl-tRNA synthetase 8 312 2.9E-44 T 22-04-2016 SII_RS09130 6723d885e0993ab7d577d77651b62787 426 Pfam PF03129 Anticodon binding domain 330 416 1.4E-13 T 22-04-2016 IPR004154 Anticodon-binding SII_RS09130 6723d885e0993ab7d577d77651b62787 426 PIRSF PIRSF001549 1 420 1.8E-123 T 22-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 SII_RS09130 6723d885e0993ab7d577d77651b62787 426 Gene3D G3DSA:3.40.50.800 326 417 3.3E-27 T 22-04-2016 IPR004154 Anticodon-binding SII_RS09130 6723d885e0993ab7d577d77651b62787 426 SUPERFAMILY SSF55681 3 320 4.59E-98 T 22-04-2016 SII_RS09130 6723d885e0993ab7d577d77651b62787 426 SUPERFAMILY SSF52954 327 417 7.7E-24 T 22-04-2016 IPR004154 Anticodon-binding SII_RS09130 6723d885e0993ab7d577d77651b62787 426 PANTHER PTHR11476:SF9 1 425 1.3E-211 T 22-04-2016 SII_RS09130 6723d885e0993ab7d577d77651b62787 426 PANTHER PTHR11476 1 425 1.3E-211 T 22-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 SII_RS03745 33f46daa2c65544286040b1c591e61b3 328 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 8 122 3.9E-18 T 22-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 SII_RS03745 33f46daa2c65544286040b1c591e61b3 328 SUPERFAMILY SSF55347 130 293 2.78E-35 T 22-04-2016 SII_RS03745 33f46daa2c65544286040b1c591e61b3 328 Gene3D G3DSA:3.40.50.720 6 146 3.1E-39 T 22-04-2016 IPR016040 NAD(P)-binding domain SII_RS03745 33f46daa2c65544286040b1c591e61b3 328 PANTHER PTHR22604 8 326 3.2E-63 T 22-04-2016 SII_RS03745 33f46daa2c65544286040b1c591e61b3 328 SUPERFAMILY SSF51735 7 157 3.11E-40 T 22-04-2016 IPR016040 NAD(P)-binding domain SII_RS03745 33f46daa2c65544286040b1c591e61b3 328 PANTHER PTHR22604:SF105 8 326 3.2E-63 T 22-04-2016 SII_RS03745 33f46daa2c65544286040b1c591e61b3 328 Gene3D G3DSA:3.30.360.10 147 326 3.3E-43 T 22-04-2016 SII_RS05440 be8d1283710d5cf2827d36c6190d1321 784 PANTHER PTHR24093 11 782 3.0E-286 T 22-04-2016 SII_RS05440 be8d1283710d5cf2827d36c6190d1321 784 PRINTS PR00121 Sodium/potassium-transporting ATPase signature 219 241 3.5E-5 T 22-04-2016 SII_RS05440 be8d1283710d5cf2827d36c6190d1321 784 PRINTS PR00121 Sodium/potassium-transporting ATPase signature 293 314 3.5E-5 T 22-04-2016 SII_RS05440 be8d1283710d5cf2827d36c6190d1321 784 PRINTS PR00121 Sodium/potassium-transporting ATPase signature 707 728 3.5E-5 T 22-04-2016 SII_RS05440 be8d1283710d5cf2827d36c6190d1321 784 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 504 614 6.5E-24 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 SII_RS05440 be8d1283710d5cf2827d36c6190d1321 784 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 74 331 2.5E-28 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 SII_RS05440 be8d1283710d5cf2827d36c6190d1321 784 Pfam PF00122 E1-E2 ATPase 71 291 1.0E-46 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 SII_RS05440 be8d1283710d5cf2827d36c6190d1321 784 SUPERFAMILY SSF81653 103 195 3.01E-23 T 22-04-2016 SII_RS05440 be8d1283710d5cf2827d36c6190d1321 784 Pfam PF00702 haloacid dehalogenase-like hydrolase 297 548 4.2E-27 T 22-04-2016 SII_RS05440 be8d1283710d5cf2827d36c6190d1321 784 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 458 468 1.5E-19 T 22-04-2016 SII_RS05440 be8d1283710d5cf2827d36c6190d1321 784 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 436 447 1.5E-19 T 22-04-2016 SII_RS05440 be8d1283710d5cf2827d36c6190d1321 784 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 300 314 1.5E-19 T 22-04-2016 SII_RS05440 be8d1283710d5cf2827d36c6190d1321 784 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 149 163 1.5E-19 T 22-04-2016 SII_RS05440 be8d1283710d5cf2827d36c6190d1321 784 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 557 569 1.5E-19 T 22-04-2016 SII_RS05440 be8d1283710d5cf2827d36c6190d1321 784 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 534 553 1.5E-19 T 22-04-2016 SII_RS05440 be8d1283710d5cf2827d36c6190d1321 784 SUPERFAMILY SSF56784 298 318 2.01E-37 T 22-04-2016 IPR023214 HAD-like domain SII_RS05440 be8d1283710d5cf2827d36c6190d1321 784 SUPERFAMILY SSF56784 394 608 2.01E-37 T 22-04-2016 IPR023214 HAD-like domain SII_RS05440 be8d1283710d5cf2827d36c6190d1321 784 SUPERFAMILY SSF81665 200 294 9.42E-43 T 22-04-2016 SII_RS05440 be8d1283710d5cf2827d36c6190d1321 784 SUPERFAMILY SSF81665 583 771 9.42E-43 T 22-04-2016 SII_RS05440 be8d1283710d5cf2827d36c6190d1321 784 SUPERFAMILY SSF81665 5 103 9.42E-43 T 22-04-2016 SII_RS05440 be8d1283710d5cf2827d36c6190d1321 784 Gene3D G3DSA:1.20.1110.10 54 97 4.9E-39 T 22-04-2016 IPR023298 P-type ATPase, transmembrane domain SII_RS05440 be8d1283710d5cf2827d36c6190d1321 784 Gene3D G3DSA:1.20.1110.10 503 735 4.9E-39 T 22-04-2016 IPR023298 P-type ATPase, transmembrane domain SII_RS05440 be8d1283710d5cf2827d36c6190d1321 784 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 302 308 - T 22-04-2016 IPR018303 P-type ATPase, phosphorylation site SII_RS05440 be8d1283710d5cf2827d36c6190d1321 784 Gene3D G3DSA:3.40.1110.10 290 325 2.2E-7 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 SII_RS05440 be8d1283710d5cf2827d36c6190d1321 784 PANTHER PTHR24093:SF298 11 782 3.0E-286 T 22-04-2016 SII_RS05440 be8d1283710d5cf2827d36c6190d1321 784 Gene3D G3DSA:2.70.150.10 98 196 7.6E-29 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 SII_RS05440 be8d1283710d5cf2827d36c6190d1321 784 Gene3D G3DSA:2.70.150.10 5 46 7.6E-29 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 SII_RS01935 4f92f50fa0f06a4d62f9cc08dc8500da 149 ProSitePatterns PS00893 Nudix box signature. 48 69 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 SII_RS01935 4f92f50fa0f06a4d62f9cc08dc8500da 149 Pfam PF00293 NUDIX domain 18 132 4.3E-17 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 SII_RS01935 4f92f50fa0f06a4d62f9cc08dc8500da 149 PRINTS PR00502 NUDIX hydrolase family signature 57 72 9.9E-5 T 22-04-2016 IPR020476 NUDIX hydrolase SII_RS01935 4f92f50fa0f06a4d62f9cc08dc8500da 149 PRINTS PR00502 NUDIX hydrolase family signature 43 57 9.9E-5 T 22-04-2016 IPR020476 NUDIX hydrolase SII_RS01935 4f92f50fa0f06a4d62f9cc08dc8500da 149 Gene3D G3DSA:3.90.79.10 4 147 1.5E-44 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SII_RS01935 4f92f50fa0f06a4d62f9cc08dc8500da 149 SUPERFAMILY SSF55811 7 145 7.04E-29 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SII_RS01935 4f92f50fa0f06a4d62f9cc08dc8500da 149 PANTHER PTHR22769 18 145 8.7E-20 T 22-04-2016 SII_RS01935 4f92f50fa0f06a4d62f9cc08dc8500da 149 PANTHER PTHR22769:SF35 18 145 8.7E-20 T 22-04-2016 SII_RS02130 ab10ee547e719837c3e326852db580e7 302 Gene3D G3DSA:3.30.460.20 10 106 9.9E-4 T 22-04-2016 SII_RS02130 ab10ee547e719837c3e326852db580e7 302 Gene3D G3DSA:1.20.58.340 120 223 2.6E-4 T 22-04-2016 SII_RS02130 ab10ee547e719837c3e326852db580e7 302 Pfam PF01544 CorA-like Mg2+ transporter protein 10 296 2.5E-53 T 22-04-2016 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 SII_RS02130 ab10ee547e719837c3e326852db580e7 302 SUPERFAMILY SSF143865 28 236 2.75E-33 T 22-04-2016 SII_RS02130 ab10ee547e719837c3e326852db580e7 302 Gene3D G3DSA:1.20.58.340 229 297 1.3E-15 T 22-04-2016 SII_RS02130 ab10ee547e719837c3e326852db580e7 302 PANTHER PTHR21535 13 292 2.8E-52 T 22-04-2016 SII_RS02130 ab10ee547e719837c3e326852db580e7 302 PANTHER PTHR21535:SF40 13 292 2.8E-52 T 22-04-2016 SII_RS02130 ab10ee547e719837c3e326852db580e7 302 SUPERFAMILY SSF144083 237 297 3.53E-12 T 22-04-2016 SII_RS04690 d3b96f9a12ba43a8d286ed99805d040b 302 PANTHER PTHR30346:SF0 1 294 2.5E-46 T 22-04-2016 SII_RS04690 d3b96f9a12ba43a8d286ed99805d040b 302 SUPERFAMILY SSF46785 1 84 3.27E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SII_RS04690 d3b96f9a12ba43a8d286ed99805d040b 302 Gene3D G3DSA:3.40.190.10 184 222 4.3E-5 T 22-04-2016 SII_RS04690 d3b96f9a12ba43a8d286ed99805d040b 302 PANTHER PTHR30346 1 294 2.5E-46 T 22-04-2016 SII_RS04690 d3b96f9a12ba43a8d286ed99805d040b 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.6E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SII_RS04690 d3b96f9a12ba43a8d286ed99805d040b 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.6E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SII_RS04690 d3b96f9a12ba43a8d286ed99805d040b 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.6E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SII_RS04690 d3b96f9a12ba43a8d286ed99805d040b 302 Gene3D G3DSA:1.10.10.10 1 80 5.0E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SII_RS04690 d3b96f9a12ba43a8d286ed99805d040b 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 5.5E-17 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SII_RS04690 d3b96f9a12ba43a8d286ed99805d040b 302 SUPERFAMILY SSF53850 97 298 1.28E-16 T 22-04-2016 SII_RS04690 d3b96f9a12ba43a8d286ed99805d040b 302 Pfam PF03466 LysR substrate binding domain 99 294 9.1E-15 T 22-04-2016 IPR005119 LysR, substrate-binding SII_RS04690 d3b96f9a12ba43a8d286ed99805d040b 302 Gene3D G3DSA:3.40.190.10 94 183 1.6E-10 T 22-04-2016 SII_RS00355 cfa2b0cb71a218af019f312198064c67 275 Pfam PF03613 PTS system mannose/fructose/sorbose family IID component 7 264 1.5E-82 T 22-04-2016 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 SII_RS00355 cfa2b0cb71a218af019f312198064c67 275 PANTHER PTHR32502:SF11 1 261 7.7E-137 T 22-04-2016 SII_RS00355 cfa2b0cb71a218af019f312198064c67 275 PANTHER PTHR32502 1 261 7.7E-137 T 22-04-2016 SII_RS03150 9ad1747573ff97e726b005f86d5d28c0 259 Pfam PF06970 Replication initiator protein A (RepA) N-terminus 14 88 1.9E-29 T 22-04-2016 IPR010724 Replication initiator A, N-terminal SII_RS09430 eff9975970827073b9188b65ae64db7d 264 Hamap MF_01461 Energy-coupling factor transporter transmembrane protein EcfT [ecfT]. 1 264 35.695 T 22-04-2016 IPR024919 ECF transporter transmembrane protein EcfT GO:0005215|GO:0006810|GO:0016021 SII_RS09430 eff9975970827073b9188b65ae64db7d 264 PANTHER PTHR33514 1 264 1.8E-117 T 22-04-2016 SII_RS09430 eff9975970827073b9188b65ae64db7d 264 Pfam PF02361 Cobalt transport protein 13 229 2.2E-47 T 22-04-2016 IPR003339 ABC/ECF transporter, transmembrane component SII_RS09430 eff9975970827073b9188b65ae64db7d 264 PANTHER PTHR33514:SF2 1 264 1.8E-117 T 22-04-2016 SII_RS04935 a3552e83cdbd281f4be588039becf394 238 PANTHER PTHR10859:SF84 1 224 3.2E-49 T 22-04-2016 SII_RS04935 a3552e83cdbd281f4be588039becf394 238 Gene3D G3DSA:3.90.550.10 2 130 1.2E-15 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SII_RS04935 a3552e83cdbd281f4be588039becf394 238 PANTHER PTHR10859 1 224 3.2E-49 T 22-04-2016 SII_RS04935 a3552e83cdbd281f4be588039becf394 238 SUPERFAMILY SSF53448 1 222 4.0E-32 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SII_RS04935 a3552e83cdbd281f4be588039becf394 238 Pfam PF00535 Glycosyl transferase family 2 6 165 4.7E-21 T 22-04-2016 IPR001173 Glycosyltransferase 2-like SII_RS07920 ea8d9d88d806d27ec35252feb054709c 405 Pfam PF00589 Phage integrase family 218 387 7.6E-15 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 SII_RS07920 ea8d9d88d806d27ec35252feb054709c 405 Gene3D G3DSA:1.10.443.10 195 388 7.4E-29 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 SII_RS07920 ea8d9d88d806d27ec35252feb054709c 405 SUPERFAMILY SSF56349 79 387 3.53E-34 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 SII_RS07920 ea8d9d88d806d27ec35252feb054709c 405 Gene3D G3DSA:1.10.150.130 95 174 4.8E-4 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal SII_RS07920 ea8d9d88d806d27ec35252feb054709c 405 PANTHER PTHR30349 150 385 2.5E-17 T 22-04-2016 SII_RS02345 9c8ad0acedca8c542b8ad6330fb473bb 636 SMART SM00642 158 505 1.7E-7 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 SII_RS02345 9c8ad0acedca8c542b8ad6330fb473bb 636 SUPERFAMILY SSF51445 79 511 6.87E-97 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily SII_RS02345 9c8ad0acedca8c542b8ad6330fb473bb 636 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 524 620 9.7E-15 T 22-04-2016 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|Reactome: REACT_474 SII_RS02345 9c8ad0acedca8c542b8ad6330fb473bb 636 Gene3D G3DSA:2.60.40.1180 518 620 2.3E-27 T 22-04-2016 IPR013780 Glycosyl hydrolase, all-beta SII_RS02345 9c8ad0acedca8c542b8ad6330fb473bb 636 Gene3D G3DSA:2.60.40.10 10 116 7.1E-32 T 22-04-2016 IPR013783 Immunoglobulin-like fold SII_RS02345 9c8ad0acedca8c542b8ad6330fb473bb 636 PANTHER PTHR10357:SF160 7 620 2.8E-290 T 22-04-2016 SII_RS02345 9c8ad0acedca8c542b8ad6330fb473bb 636 TIGRFAM TIGR01515 branching_enzym: 1,4-alpha-glucan branching enzyme 10 617 7.0E-205 T 22-04-2016 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00164 SII_RS02345 9c8ad0acedca8c542b8ad6330fb473bb 636 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 22 103 9.5E-21 T 22-04-2016 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 SII_RS02345 9c8ad0acedca8c542b8ad6330fb473bb 636 Hamap MF_00685 1,4-alpha-glucan branching enzyme GlgB [glgB]. 1 621 37.326 T 22-04-2016 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00164 SII_RS02345 9c8ad0acedca8c542b8ad6330fb473bb 636 SUPERFAMILY SSF81296 33 103 3.85E-12 T 22-04-2016 IPR014756 Immunoglobulin E-set SII_RS02345 9c8ad0acedca8c542b8ad6330fb473bb 636 Pfam PF00128 Alpha amylase, catalytic domain 172 245 8.1E-7 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 SII_RS02345 9c8ad0acedca8c542b8ad6330fb473bb 636 Gene3D G3DSA:3.20.20.80 142 507 1.5E-81 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 SII_RS02345 9c8ad0acedca8c542b8ad6330fb473bb 636 PANTHER PTHR10357 7 620 2.8E-290 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 SII_RS02345 9c8ad0acedca8c542b8ad6330fb473bb 636 SUPERFAMILY SSF51011 519 621 1.08E-25 T 22-04-2016 SII_RS02345 9c8ad0acedca8c542b8ad6330fb473bb 636 PIRSF PIRSF000463 1 631 1.6E-245 T 22-04-2016 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00164 SII_RS09050 0ba346b4708bd390f63f8295a4b446ce 146 SUPERFAMILY SSF46785 1 68 9.8E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SII_RS09050 0ba346b4708bd390f63f8295a4b446ce 146 Pfam PF01316 Arginine repressor, DNA binding domain 1 68 2.8E-26 T 22-04-2016 IPR020900 Arginine repressor, DNA-binding domain GO:0003700|GO:0006355|GO:0006525 UniPathway: UPA00068 SII_RS09050 0ba346b4708bd390f63f8295a4b446ce 146 TIGRFAM TIGR01529 argR_whole: arginine repressor 5 143 6.3E-48 T 22-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 SII_RS09050 0ba346b4708bd390f63f8295a4b446ce 146 PRINTS PR01467 Bacterial arginine repressor signature 21 34 2.1E-14 T 22-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 SII_RS09050 0ba346b4708bd390f63f8295a4b446ce 146 PRINTS PR01467 Bacterial arginine repressor signature 37 52 2.1E-14 T 22-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 SII_RS09050 0ba346b4708bd390f63f8295a4b446ce 146 PRINTS PR01467 Bacterial arginine repressor signature 114 129 2.1E-14 T 22-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 SII_RS09050 0ba346b4708bd390f63f8295a4b446ce 146 Gene3D G3DSA:3.30.1360.40 78 143 5.2E-19 T 22-04-2016 IPR024946 Arginine repressor C-terminal-like domain SII_RS09050 0ba346b4708bd390f63f8295a4b446ce 146 PANTHER PTHR34471:SF1 1 143 2.5E-47 T 22-04-2016 SII_RS09050 0ba346b4708bd390f63f8295a4b446ce 146 SUPERFAMILY SSF55252 78 143 1.18E-14 T 22-04-2016 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 UniPathway: UPA00068 SII_RS09050 0ba346b4708bd390f63f8295a4b446ce 146 Hamap MF_00173 Arginine repressor [argR]. 1 146 45.404 T 22-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 SII_RS09050 0ba346b4708bd390f63f8295a4b446ce 146 Gene3D G3DSA:1.10.10.10 1 67 1.4E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SII_RS09050 0ba346b4708bd390f63f8295a4b446ce 146 Pfam PF02863 Arginine repressor, C-terminal domain 82 141 6.6E-15 T 22-04-2016 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 UniPathway: UPA00068 SII_RS09050 0ba346b4708bd390f63f8295a4b446ce 146 ProDom PD007402 ARGININE REPRESSOR TRANSCRIPTION BIOSYNTHESIS DNA-BINDING REGULATION AMINO-ACID ARGR TRANSCRIPTIONAL FAMILY 83 145 4.0E-4 T 22-04-2016 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 UniPathway: UPA00068 SII_RS09050 0ba346b4708bd390f63f8295a4b446ce 146 PANTHER PTHR34471 1 143 2.5E-47 T 22-04-2016 SII_RS08750 11d84e310881c02109fabe5cb69c4234 68 SUPERFAMILY SSF46561 11 66 3.53E-19 T 22-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SII_RS08750 11d84e310881c02109fabe5cb69c4234 68 ProSitePatterns PS00579 Ribosomal protein L29 signature. 46 60 - T 22-04-2016 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SII_RS08750 11d84e310881c02109fabe5cb69c4234 68 TIGRFAM TIGR00012 L29: ribosomal protein uL29 12 66 1.7E-22 T 22-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SII_RS08750 11d84e310881c02109fabe5cb69c4234 68 PANTHER PTHR10916:SF0 1 66 2.7E-23 T 22-04-2016 SII_RS08750 11d84e310881c02109fabe5cb69c4234 68 PANTHER PTHR10916 1 66 2.7E-23 T 22-04-2016 SII_RS08750 11d84e310881c02109fabe5cb69c4234 68 Pfam PF00831 Ribosomal L29 protein 11 66 4.0E-22 T 22-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SII_RS08750 11d84e310881c02109fabe5cb69c4234 68 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 67 16.372 T 22-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SII_RS08750 11d84e310881c02109fabe5cb69c4234 68 Gene3D G3DSA:1.10.287.310 10 66 1.8E-24 T 22-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SII_RS02815 5cb6abe9c1230b216df9089db8156e36 115 Gene3D G3DSA:3.40.30.10 2 112 1.1E-33 T 22-04-2016 IPR012336 Thioredoxin-like fold SII_RS02815 5cb6abe9c1230b216df9089db8156e36 115 TIGRFAM TIGR01295 PedC_BrcD: putative bacteriocin transport accessory protein 4 114 8.8E-35 T 22-04-2016 IPR005985 Bacteriocin transport accessory protein GO:0030152 SII_RS02815 5cb6abe9c1230b216df9089db8156e36 115 SUPERFAMILY SSF52833 3 112 2.97E-24 T 22-04-2016 IPR012336 Thioredoxin-like fold SII_RS02815 5cb6abe9c1230b216df9089db8156e36 115 Pfam PF00085 Thioredoxin 36 113 7.6E-5 T 22-04-2016 IPR013766 Thioredoxin domain GO:0045454 SII_RS00315 86cc4278dd8cd3993192edf7c04b8a63 329 PANTHER PTHR28629 1 329 3.2E-158 T 22-04-2016 SII_RS00315 86cc4278dd8cd3993192edf7c04b8a63 329 Gene3D G3DSA:3.40.50.10440 11 181 1.2E-74 T 22-04-2016 SII_RS00315 86cc4278dd8cd3993192edf7c04b8a63 329 PANTHER PTHR28629:SF2 1 329 3.2E-158 T 22-04-2016 SII_RS00315 86cc4278dd8cd3993192edf7c04b8a63 329 TIGRFAM TIGR02363 dhaK1: dihydroxyacetone kinase, DhaK subunit 1 329 2.5E-149 T 22-04-2016 IPR012736 Dihydroxyacetone kinase DhaK, subunit 1 KEGG: 00563+2.7.-.-|UniPathway: UPA00616 SII_RS00315 86cc4278dd8cd3993192edf7c04b8a63 329 Pfam PF02733 Dak1 domain 18 326 1.7E-115 T 22-04-2016 IPR004006 DhaK domain GO:0004371|GO:0006071 SII_RS00315 86cc4278dd8cd3993192edf7c04b8a63 329 SUPERFAMILY SSF82549 11 329 1.99E-120 T 22-04-2016 SII_RS00315 86cc4278dd8cd3993192edf7c04b8a63 329 Gene3D G3DSA:3.30.1180.20 184 329 5.5E-48 T 22-04-2016 SII_RS06610 45aeae1d556d5e3761e4ca8234ea3c6c 191 Pfam PF13302 Acetyltransferase (GNAT) domain 19 160 1.5E-31 T 22-04-2016 IPR000182 GNAT domain GO:0008080 SII_RS06610 45aeae1d556d5e3761e4ca8234ea3c6c 191 PANTHER PTHR13256 13 191 2.7E-55 T 22-04-2016 SII_RS06610 45aeae1d556d5e3761e4ca8234ea3c6c 191 SUPERFAMILY SSF55729 13 185 2.7E-45 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SII_RS06610 45aeae1d556d5e3761e4ca8234ea3c6c 191 PANTHER PTHR13256:SF10 13 191 2.7E-55 T 22-04-2016 SII_RS06610 45aeae1d556d5e3761e4ca8234ea3c6c 191 Gene3D G3DSA:3.40.630.30 5 190 5.7E-52 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SII_RS00020 bf6f6c4f1c5ffb5096cfba7a3f33bb84 166 Pfam PF06998 Protein of unknown function (DUF1307) 40 155 2.1E-33 T 22-04-2016 IPR009736 Protein of unknown function DUF1307 SII_RS00020 bf6f6c4f1c5ffb5096cfba7a3f33bb84 166 SUPERFAMILY SSF160704 29 157 1.2E-29 T 22-04-2016 IPR009736 Protein of unknown function DUF1307 SII_RS00020 bf6f6c4f1c5ffb5096cfba7a3f33bb84 166 PANTHER PTHR40578:SF1 3 159 1.7E-28 T 22-04-2016 SII_RS00020 bf6f6c4f1c5ffb5096cfba7a3f33bb84 166 PIRSF PIRSF006187 2 159 7.6E-37 T 22-04-2016 IPR009736 Protein of unknown function DUF1307 SII_RS00020 bf6f6c4f1c5ffb5096cfba7a3f33bb84 166 Gene3D G3DSA:3.30.1830.10 32 158 1.2E-35 T 22-04-2016 IPR009736 Protein of unknown function DUF1307 SII_RS00020 bf6f6c4f1c5ffb5096cfba7a3f33bb84 166 PANTHER PTHR40578 3 159 1.7E-28 T 22-04-2016 SII_RS04900 538d017670466ff7f0fc65eafd599de7 311 Pfam PF00535 Glycosyl transferase family 2 4 114 5.3E-23 T 22-04-2016 IPR001173 Glycosyltransferase 2-like SII_RS04900 538d017670466ff7f0fc65eafd599de7 311 PANTHER PTHR22916 1 242 2.3E-30 T 22-04-2016 SII_RS04900 538d017670466ff7f0fc65eafd599de7 311 Gene3D G3DSA:3.90.550.10 1 229 4.9E-45 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SII_RS04900 538d017670466ff7f0fc65eafd599de7 311 SUPERFAMILY SSF53448 2 233 2.63E-47 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SII_RS02545 8ab25884ee43df3ab15da480ba325161 178 PANTHER PTHR34295:SF1 6 178 2.8E-44 T 22-04-2016 SII_RS02545 8ab25884ee43df3ab15da480ba325161 178 PANTHER PTHR34295 6 178 2.8E-44 T 22-04-2016 SII_RS02545 8ab25884ee43df3ab15da480ba325161 178 PIRSF PIRSF016661 2 176 2.4E-41 T 22-04-2016 IPR003784 BioY protein GO:0005886|GO:0015225|GO:0015878 SII_RS02545 8ab25884ee43df3ab15da480ba325161 178 Pfam PF02632 BioY family 27 164 4.5E-33 T 22-04-2016 IPR003784 BioY protein GO:0005886|GO:0015225|GO:0015878 SII_RS04055 373064bd1acc689d83216deb6cb5cfdc 359 SMART SM00937 65 180 4.4E-57 T 22-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 SII_RS04055 373064bd1acc689d83216deb6cb5cfdc 359 Pfam PF03462 PCRF domain 11 205 7.5E-71 T 22-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 SII_RS04055 373064bd1acc689d83216deb6cb5cfdc 359 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 3 358 39.259 T 22-04-2016 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 SII_RS04055 373064bd1acc689d83216deb6cb5cfdc 359 Pfam PF00472 RF-1 domain 213 322 4.0E-38 T 22-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 SII_RS04055 373064bd1acc689d83216deb6cb5cfdc 359 Gene3D G3DSA:1.20.58.410 6 95 9.4E-21 T 22-04-2016 SII_RS04055 373064bd1acc689d83216deb6cb5cfdc 359 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 3 358 1.1E-159 T 22-04-2016 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 SII_RS04055 373064bd1acc689d83216deb6cb5cfdc 359 Gene3D G3DSA:3.30.160.20 212 285 3.1E-29 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain SII_RS04055 373064bd1acc689d83216deb6cb5cfdc 359 PANTHER PTHR11075:SF9 2 357 2.9E-167 T 22-04-2016 SII_RS04055 373064bd1acc689d83216deb6cb5cfdc 359 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 229 245 - T 22-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 SII_RS04055 373064bd1acc689d83216deb6cb5cfdc 359 SUPERFAMILY SSF75620 10 354 4.19E-127 T 22-04-2016 SII_RS04055 373064bd1acc689d83216deb6cb5cfdc 359 PANTHER PTHR11075 2 357 2.9E-167 T 22-04-2016 SII_RS02600 641b335ea97d472896756f1d9ea4f758 744 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 29 556 1.1E-177 T 22-04-2016 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 SII_RS02600 641b335ea97d472896756f1d9ea4f758 744 PANTHER PTHR30255 2 734 2.4E-287 T 22-04-2016 SII_RS02600 641b335ea97d472896756f1d9ea4f758 744 PANTHER PTHR30255:SF2 2 734 2.4E-287 T 22-04-2016 SII_RS02600 641b335ea97d472896756f1d9ea4f758 744 Pfam PF01368 DHH family 84 228 8.0E-13 T 22-04-2016 IPR001667 DDH domain SII_RS02600 641b335ea97d472896756f1d9ea4f758 744 SUPERFAMILY SSF64182 58 437 8.63E-120 T 22-04-2016 SII_RS02600 641b335ea97d472896756f1d9ea4f758 744 Pfam PF02272 DHHA1 domain 369 431 2.6E-10 T 22-04-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7 SII_RS02600 641b335ea97d472896756f1d9ea4f758 744 Pfam PF10141 Single-strand DNA-specific exonuclease, C terminal domain 593 732 1.9E-35 T 22-04-2016 IPR018779 Single-stranded-DNA-specific exonuclease RecJ, C-terminal SII_RS07630 e1b6861e7c15a1f07a940fffec9dd4c5 187 PIRSF PIRSF007510 1 182 9.0E-86 T 22-04-2016 IPR006340 Protein of unknown function DUF436 SII_RS07630 e1b6861e7c15a1f07a940fffec9dd4c5 187 SUPERFAMILY SSF110710 4 186 2.33E-77 T 22-04-2016 SII_RS07630 e1b6861e7c15a1f07a940fffec9dd4c5 187 TIGRFAM TIGR01440 TIGR01440: TIGR01440 family protein 8 179 2.2E-80 T 22-04-2016 IPR006340 Protein of unknown function DUF436 SII_RS07630 e1b6861e7c15a1f07a940fffec9dd4c5 187 ProDom PD102102 UPF0340 3D-STRUCTURE YWLG SMU.87 STU1894 BT9727_4999 TRANSFERASE TTE0860 SPY1898/M5005_SPY1614 TT1679 11 186 7.0E-77 T 22-04-2016 IPR006340 Protein of unknown function DUF436 SII_RS07630 e1b6861e7c15a1f07a940fffec9dd4c5 187 Pfam PF04260 Protein of unknown function (DUF436) 9 179 7.7E-72 T 22-04-2016 IPR006340 Protein of unknown function DUF436 SII_RS07630 e1b6861e7c15a1f07a940fffec9dd4c5 187 Gene3D G3DSA:3.40.50.10360 4 186 4.4E-84 T 22-04-2016 IPR006340 Protein of unknown function DUF436 SII_RS07630 e1b6861e7c15a1f07a940fffec9dd4c5 187 Hamap MF_00800 UPF0340 protein . 1 187 94.231 T 22-04-2016 IPR006340 Protein of unknown function DUF436 SII_RS00245 46c20f96390f8b625e001c8186f9c50c 339 PANTHER PTHR10520 6 329 5.6E-189 T 22-04-2016 SII_RS00245 46c20f96390f8b625e001c8186f9c50c 339 SUPERFAMILY SSF55326 5 168 3.29E-48 T 22-04-2016 SII_RS00245 46c20f96390f8b625e001c8186f9c50c 339 Pfam PF00586 AIR synthase related protein, N-terminal domain 61 161 7.5E-17 T 22-04-2016 IPR016188 PurM-like, N-terminal domain SII_RS00245 46c20f96390f8b625e001c8186f9c50c 339 Gene3D G3DSA:3.90.650.10 169 338 4.2E-61 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain SII_RS00245 46c20f96390f8b625e001c8186f9c50c 339 SUPERFAMILY SSF56042 169 337 2.69E-53 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain SII_RS00245 46c20f96390f8b625e001c8186f9c50c 339 Pfam PF02769 AIR synthase related protein, C-terminal domain 174 338 8.5E-36 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain SII_RS00245 46c20f96390f8b625e001c8186f9c50c 339 Gene3D G3DSA:3.30.1330.10 19 168 8.6E-61 T 22-04-2016 IPR016188 PurM-like, N-terminal domain SII_RS00245 46c20f96390f8b625e001c8186f9c50c 339 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 4 339 45.581 T 22-04-2016 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 SII_RS00245 46c20f96390f8b625e001c8186f9c50c 339 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 5 330 4.6E-134 T 22-04-2016 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 SII_RS07995 cf93aa147b4fcb70bee55ac0d2b457b2 243 SUPERFAMILY SSF55120 48 237 2.88E-43 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 SII_RS07995 cf93aa147b4fcb70bee55ac0d2b457b2 243 PANTHER PTHR21600 1 241 1.5E-64 T 22-04-2016 SII_RS07995 cf93aa147b4fcb70bee55ac0d2b457b2 243 Pfam PF01479 S4 domain 1 42 3.0E-13 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SII_RS07995 cf93aa147b4fcb70bee55ac0d2b457b2 243 Pfam PF00849 RNA pseudouridylate synthase 62 197 6.7E-23 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 SII_RS07995 cf93aa147b4fcb70bee55ac0d2b457b2 243 Gene3D G3DSA:3.10.290.10 1 64 4.0E-20 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SII_RS07995 cf93aa147b4fcb70bee55ac0d2b457b2 243 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 100 114 - T 22-04-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 SII_RS07995 cf93aa147b4fcb70bee55ac0d2b457b2 243 SUPERFAMILY SSF55174 1 58 1.67E-13 T 22-04-2016 SII_RS07995 cf93aa147b4fcb70bee55ac0d2b457b2 243 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 66 229 8.4E-48 T 22-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 SII_RS07995 cf93aa147b4fcb70bee55ac0d2b457b2 243 PANTHER PTHR21600:SF19 1 241 1.5E-64 T 22-04-2016 SII_RS07995 cf93aa147b4fcb70bee55ac0d2b457b2 243 SMART SM00363 1 59 1.4E-12 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SII_RS02005 a97d926704dc37e617004f5db19a2715 446 PANTHER PTHR30008 1 441 1.4E-160 T 22-04-2016 SII_RS02005 a97d926704dc37e617004f5db19a2715 446 PANTHER PTHR30008:SF0 1 441 1.4E-160 T 22-04-2016 SII_RS02005 a97d926704dc37e617004f5db19a2715 446 Pfam PF02601 Exonuclease VII, large subunit 122 436 8.8E-97 T 22-04-2016 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 SII_RS02005 a97d926704dc37e617004f5db19a2715 446 Pfam PF13742 OB-fold nucleic acid binding domain 5 99 6.3E-25 T 22-04-2016 IPR025824 OB-fold nucleic acid binding domain GO:0003676 SII_RS02005 a97d926704dc37e617004f5db19a2715 446 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 6 355 1.3E-130 T 22-04-2016 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 SII_RS02005 a97d926704dc37e617004f5db19a2715 446 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 2 439 29.019 T 22-04-2016 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 SII_RS08855 ac8f94a8b351a3c05fd4a2c1061633fa 228 SMART SM00862 149 226 3.6E-20 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SII_RS08855 ac8f94a8b351a3c05fd4a2c1061633fa 228 SMART SM00448 3 114 5.2E-42 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SII_RS08855 ac8f94a8b351a3c05fd4a2c1061633fa 228 Gene3D G3DSA:1.10.10.10 127 227 1.2E-30 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SII_RS08855 ac8f94a8b351a3c05fd4a2c1061633fa 228 SUPERFAMILY SSF52172 3 183 6.97E-42 T 22-04-2016 IPR011006 CheY-like superfamily SII_RS08855 ac8f94a8b351a3c05fd4a2c1061633fa 228 Pfam PF00486 Transcriptional regulatory protein, C terminal 150 226 1.5E-23 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SII_RS08855 ac8f94a8b351a3c05fd4a2c1061633fa 228 Gene3D G3DSA:3.40.50.2300 3 124 3.7E-38 T 22-04-2016 SII_RS08855 ac8f94a8b351a3c05fd4a2c1061633fa 228 PANTHER PTHR26402 3 227 8.6E-108 T 22-04-2016 SII_RS08855 ac8f94a8b351a3c05fd4a2c1061633fa 228 PANTHER PTHR26402:SF614 3 227 8.6E-108 T 22-04-2016 SII_RS08855 ac8f94a8b351a3c05fd4a2c1061633fa 228 Pfam PF00072 Response regulator receiver domain 5 114 2.3E-29 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SII_RS03850 c6fc0476733fa4be59d2be705fcdf6b6 169 Gene3D G3DSA:1.10.10.10 3 60 3.3E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SII_RS03850 c6fc0476733fa4be59d2be705fcdf6b6 169 SUPERFAMILY SSF46785 2 59 1.47E-10 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SII_RS03850 c6fc0476733fa4be59d2be705fcdf6b6 169 Gene3D G3DSA:3.30.1340.20 67 169 2.5E-41 T 22-04-2016 IPR004173 3H domain GO:0036094 SII_RS03850 c6fc0476733fa4be59d2be705fcdf6b6 169 Pfam PF08279 HTH domain 5 58 1.1E-15 T 22-04-2016 IPR013196 Helix-turn-helix, type 11 SII_RS03850 c6fc0476733fa4be59d2be705fcdf6b6 169 ProDom PD469575 TRANSCRIPTION DNA-BINDING REGULATION TRANSCRIPTIONAL REGULATOR REPRESSOR FAMILY BIOTIN REGULATOR 3H 76 169 4.0E-38 T 22-04-2016 IPR004173 3H domain GO:0036094 SII_RS03850 c6fc0476733fa4be59d2be705fcdf6b6 169 SUPERFAMILY SSF75500 67 169 1.01E-33 T 22-04-2016 IPR004173 3H domain GO:0036094 SII_RS03850 c6fc0476733fa4be59d2be705fcdf6b6 169 PANTHER PTHR40068 1 169 9.5E-69 T 22-04-2016 SII_RS03850 c6fc0476733fa4be59d2be705fcdf6b6 169 PIRSF PIRSF037847 1 169 5.7E-65 T 22-04-2016 IPR026043 Transcription repressor NadR SII_RS03850 c6fc0476733fa4be59d2be705fcdf6b6 169 Pfam PF02829 3H domain 72 168 5.1E-34 T 22-04-2016 IPR004173 3H domain GO:0036094 SII_RS07270 2d7029411e5671b289fbf6c03501f95e 449 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 3 448 1.2E-85 T 22-04-2016 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 SII_RS07270 2d7029411e5671b289fbf6c03501f95e 449 PANTHER PTHR21499 3 448 4.5E-140 T 22-04-2016 SII_RS07270 2d7029411e5671b289fbf6c03501f95e 449 Pfam PF00696 Amino acid kinase family 2 276 9.3E-45 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SII_RS07270 2d7029411e5671b289fbf6c03501f95e 449 Pfam PF13840 ACT domain 380 444 1.8E-12 T 22-04-2016 IPR027795 GATS-like ACT domain SII_RS07270 2d7029411e5671b289fbf6c03501f95e 449 SUPERFAMILY SSF55021 372 448 4.33E-21 T 22-04-2016 SII_RS07270 2d7029411e5671b289fbf6c03501f95e 449 SUPERFAMILY SSF55021 298 360 2.11E-8 T 22-04-2016 SII_RS07270 2d7029411e5671b289fbf6c03501f95e 449 Gene3D G3DSA:3.40.1160.10 105 288 4.7E-51 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SII_RS07270 2d7029411e5671b289fbf6c03501f95e 449 Gene3D G3DSA:3.40.1160.10 1 54 4.7E-51 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SII_RS07270 2d7029411e5671b289fbf6c03501f95e 449 ProSitePatterns PS00324 Aspartokinase signature. 3 11 - T 22-04-2016 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 SII_RS07270 2d7029411e5671b289fbf6c03501f95e 449 PIRSF PIRSF000726 1 449 4.9E-82 T 22-04-2016 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 SII_RS07270 2d7029411e5671b289fbf6c03501f95e 449 PANTHER PTHR21499:SF3 3 448 4.5E-140 T 22-04-2016 SII_RS07270 2d7029411e5671b289fbf6c03501f95e 449 SUPERFAMILY SSF53633 1 288 6.02E-68 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SII_RS08995 9b2c23fc892714ff89d87cfc413a1aa9 381 Hamap MF_00268 Protein RecA [recA]. 19 347 51.187 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 SII_RS08995 9b2c23fc892714ff89d87cfc413a1aa9 381 SUPERFAMILY SSF52540 18 285 1.78E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS08995 9b2c23fc892714ff89d87cfc413a1aa9 381 PANTHER PTHR22942:SF1 17 353 5.0E-195 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 SII_RS08995 9b2c23fc892714ff89d87cfc413a1aa9 381 Gene3D G3DSA:3.30.250.10 286 343 5.9E-27 T 22-04-2016 IPR023400 DNA recombination and repair protein RecA, C-terminal SII_RS08995 9b2c23fc892714ff89d87cfc413a1aa9 381 Pfam PF00154 recA bacterial DNA recombination protein 21 286 1.6E-139 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 SII_RS08995 9b2c23fc892714ff89d87cfc413a1aa9 381 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 18 341 1.1E-162 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 SII_RS08995 9b2c23fc892714ff89d87cfc413a1aa9 381 SUPERFAMILY SSF54752 286 344 1.19E-20 T 22-04-2016 IPR023400 DNA recombination and repair protein RecA, C-terminal SII_RS08995 9b2c23fc892714ff89d87cfc413a1aa9 381 PANTHER PTHR22942 17 353 5.0E-195 T 22-04-2016 SII_RS08995 9b2c23fc892714ff89d87cfc413a1aa9 381 Gene3D G3DSA:3.40.50.300 40 285 9.7E-75 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS08995 9b2c23fc892714ff89d87cfc413a1aa9 381 PRINTS PR00142 RecA protein signature 107 136 3.9E-81 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 SII_RS08995 9b2c23fc892714ff89d87cfc413a1aa9 381 PRINTS PR00142 RecA protein signature 141 170 3.9E-81 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 SII_RS08995 9b2c23fc892714ff89d87cfc413a1aa9 381 PRINTS PR00142 RecA protein signature 261 290 3.9E-81 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 SII_RS08995 9b2c23fc892714ff89d87cfc413a1aa9 381 PRINTS PR00142 RecA protein signature 224 252 3.9E-81 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 SII_RS08995 9b2c23fc892714ff89d87cfc413a1aa9 381 PRINTS PR00142 RecA protein signature 315 332 3.9E-81 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 SII_RS08995 9b2c23fc892714ff89d87cfc413a1aa9 381 PRINTS PR00142 RecA protein signature 179 208 3.9E-81 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 SII_RS08995 9b2c23fc892714ff89d87cfc413a1aa9 381 ProSitePatterns PS00321 recA signature. 227 235 - T 22-04-2016 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 SII_RS08995 9b2c23fc892714ff89d87cfc413a1aa9 381 SMART SM00382 71 242 2.1E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain SII_RS04575 c9734254ad7f369dc5f6da4cd721fc8f 662 Gene3D G3DSA:3.30.2060.10 164 237 3.4E-12 T 22-04-2016 SII_RS04575 c9734254ad7f369dc5f6da4cd721fc8f 662 Gene3D G3DSA:3.40.50.300 423 588 1.0E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS04575 c9734254ad7f369dc5f6da4cd721fc8f 662 Pfam PF02151 UvrB/uvrC motif 626 660 2.5E-8 T 22-04-2016 IPR001943 UVR domain GO:0005515 SII_RS04575 c9734254ad7f369dc5f6da4cd721fc8f 662 Gene3D G3DSA:4.10.860.10 612 661 4.9E-13 T 22-04-2016 IPR001943 UVR domain GO:0005515 SII_RS04575 c9734254ad7f369dc5f6da4cd721fc8f 662 SMART SM00487 14 430 2.0E-28 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain SII_RS04575 c9734254ad7f369dc5f6da4cd721fc8f 662 PANTHER PTHR24029 4 661 0.0 T 22-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 SII_RS04575 c9734254ad7f369dc5f6da4cd721fc8f 662 SUPERFAMILY SSF52540 38 72 1.07E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS04575 c9734254ad7f369dc5f6da4cd721fc8f 662 SUPERFAMILY SSF52540 461 591 1.07E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS04575 c9734254ad7f369dc5f6da4cd721fc8f 662 Gene3D G3DSA:3.40.50.300 10 94 3.8E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS04575 c9734254ad7f369dc5f6da4cd721fc8f 662 Gene3D G3DSA:3.40.50.300 393 414 3.8E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS04575 c9734254ad7f369dc5f6da4cd721fc8f 662 Gene3D G3DSA:3.40.50.300 283 343 3.8E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS04575 c9734254ad7f369dc5f6da4cd721fc8f 662 Pfam PF12344 Ultra-violet resistance protein B 556 598 1.4E-24 T 22-04-2016 IPR024759 UvrB, YAD/RRR-motif-containing domain SII_RS04575 c9734254ad7f369dc5f6da4cd721fc8f 662 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 9 659 0.0 T 22-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 SII_RS04575 c9734254ad7f369dc5f6da4cd721fc8f 662 SUPERFAMILY SSF46600 617 660 2.75E-9 T 22-04-2016 IPR001943 UVR domain GO:0005515 SII_RS04575 c9734254ad7f369dc5f6da4cd721fc8f 662 Pfam PF04851 Type III restriction enzyme, res subunit 17 143 4.2E-13 T 22-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 SII_RS04575 c9734254ad7f369dc5f6da4cd721fc8f 662 Pfam PF00271 Helicase conserved C-terminal domain 439 549 2.5E-19 T 22-04-2016 IPR001650 Helicase, C-terminal SII_RS04575 c9734254ad7f369dc5f6da4cd721fc8f 662 Hamap MF_00204 UvrABC system protein B [uvrB]. 8 661 43.802 T 22-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 SII_RS04575 c9734254ad7f369dc5f6da4cd721fc8f 662 SMART SM00490 464 550 6.1E-20 T 22-04-2016 IPR001650 Helicase, C-terminal SII_RS04575 c9734254ad7f369dc5f6da4cd721fc8f 662 SUPERFAMILY SSF52540 8 419 4.99E-141 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS09410 8cf2d01528a2e45911f62b8d3e1f25a0 223 PANTHER PTHR30182 1 223 2.6E-116 T 22-04-2016 SII_RS09410 8cf2d01528a2e45911f62b8d3e1f25a0 223 PANTHER PTHR30182:SF2 1 223 2.6E-116 T 22-04-2016 SII_RS09410 8cf2d01528a2e45911f62b8d3e1f25a0 223 PIRSF PIRSF036692 4 223 8.5E-107 T 22-04-2016 IPR004643 Iron-sulphur-dependent L-serine dehydratase beta subunit GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17|UniPathway: UPA00138 SII_RS09410 8cf2d01528a2e45911f62b8d3e1f25a0 223 Pfam PF01842 ACT domain 153 214 1.6E-11 T 22-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 SII_RS09410 8cf2d01528a2e45911f62b8d3e1f25a0 223 SUPERFAMILY SSF143548 22 141 3.4E-29 T 22-04-2016 IPR029009 Allosteric substrate binding domain SII_RS09410 8cf2d01528a2e45911f62b8d3e1f25a0 223 SUPERFAMILY SSF55021 140 220 1.71E-19 T 22-04-2016 SII_RS09410 8cf2d01528a2e45911f62b8d3e1f25a0 223 TIGRFAM TIGR00719 sda_beta: L-serine dehydratase, iron-sulfur-dependent, beta subunit 5 207 1.5E-70 T 22-04-2016 IPR004643 Iron-sulphur-dependent L-serine dehydratase beta subunit GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17|UniPathway: UPA00138 SII_RS09410 8cf2d01528a2e45911f62b8d3e1f25a0 223 Pfam PF03315 Serine dehydratase beta chain 8 78 8.5E-12 T 22-04-2016 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17|UniPathway: UPA00138 SII_RS09410 8cf2d01528a2e45911f62b8d3e1f25a0 223 Gene3D G3DSA:3.30.70.260 139 220 3.5E-24 T 22-04-2016 SII_RS09410 8cf2d01528a2e45911f62b8d3e1f25a0 223 Gene3D G3DSA:3.30.1330.90 16 138 2.8E-30 T 22-04-2016 IPR029009 Allosteric substrate binding domain SII_RS00035 06476749f35283e19876f7b554a27985 1164 SMART SM00982 1012 1112 3.0E-31 T 22-04-2016 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 SII_RS00035 06476749f35283e19876f7b554a27985 1164 PANTHER PTHR14025:SF21 397 1112 0.0 T 22-04-2016 SII_RS00035 06476749f35283e19876f7b554a27985 1164 Gene3D G3DSA:3.40.50.300 806 964 3.2E-33 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS00035 06476749f35283e19876f7b554a27985 1164 PANTHER PTHR14025 397 1112 0.0 T 22-04-2016 SII_RS00035 06476749f35283e19876f7b554a27985 1164 SUPERFAMILY SSF52540 532 791 6.34E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS00035 06476749f35283e19876f7b554a27985 1164 SMART SM01058 487 584 2.2E-43 T 22-04-2016 IPR003711 CarD-like/TRCF domain SII_RS00035 06476749f35283e19876f7b554a27985 1164 SUPERFAMILY SSF141259 478 556 2.88E-24 T 22-04-2016 IPR003711 CarD-like/TRCF domain SII_RS00035 06476749f35283e19876f7b554a27985 1164 Gene3D G3DSA:3.40.50.300 596 794 6.7E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS00035 06476749f35283e19876f7b554a27985 1164 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 40 1150 28.442 T 22-04-2016 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 SII_RS00035 06476749f35283e19876f7b554a27985 1164 SMART SM00487 608 798 2.7E-36 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain SII_RS00035 06476749f35283e19876f7b554a27985 1164 SUPERFAMILY SSF52540 368 477 3.4E-18 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS00035 06476749f35283e19876f7b554a27985 1164 SMART SM00490 831 918 9.6E-17 T 22-04-2016 IPR001650 Helicase, C-terminal SII_RS00035 06476749f35283e19876f7b554a27985 1164 Pfam PF00271 Helicase conserved C-terminal domain 815 917 3.5E-15 T 22-04-2016 IPR001650 Helicase, C-terminal SII_RS00035 06476749f35283e19876f7b554a27985 1164 Gene3D G3DSA:3.30.2060.10 139 217 1.2E-17 T 22-04-2016 SII_RS00035 06476749f35283e19876f7b554a27985 1164 SUPERFAMILY SSF52540 790 996 3.33E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS00035 06476749f35283e19876f7b554a27985 1164 SUPERFAMILY SSF143517 999 1157 9.29E-31 T 22-04-2016 SII_RS00035 06476749f35283e19876f7b554a27985 1164 Pfam PF02559 CarD-like/TRCF domain 488 583 8.0E-28 T 22-04-2016 IPR003711 CarD-like/TRCF domain SII_RS00035 06476749f35283e19876f7b554a27985 1164 SUPERFAMILY SSF52540 17 358 7.61E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS00035 06476749f35283e19876f7b554a27985 1164 Pfam PF03461 TRCF domain 1013 1100 1.7E-23 T 22-04-2016 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 SII_RS00035 06476749f35283e19876f7b554a27985 1164 Pfam PF00270 DEAD/DEAH box helicase 615 772 2.3E-18 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 SII_RS00035 06476749f35283e19876f7b554a27985 1164 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 156 1083 0.0 T 22-04-2016 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 SII_RS07330 06186a3f4440139c32d03286d8119132 238 PANTHER PTHR12532:SF4 1 236 2.7E-150 T 22-04-2016 SII_RS07330 06186a3f4440139c32d03286d8119132 238 Pfam PF01709 Transcriptional regulator 4 235 2.0E-80 T 22-04-2016 IPR002876 Transcriptional regulator TACO1-like SII_RS07330 06186a3f4440139c32d03286d8119132 238 Hamap MF_00918 Probable transcriptional regulatory protein YeeN [yeeN]. 1 238 60.43 T 22-04-2016 IPR026562 Probable transcriptional regulatory protein YeeN SII_RS07330 06186a3f4440139c32d03286d8119132 238 Gene3D G3DSA:3.30.70.980 132 202 1.4E-24 T 22-04-2016 IPR026564 Transcriptional regulator TACO1-like, domain 3 SII_RS07330 06186a3f4440139c32d03286d8119132 238 Gene3D G3DSA:3.30.1270.10 80 131 6.7E-34 T 22-04-2016 IPR026563 Transcriptional regulator TACO1-like, domain 2 SII_RS07330 06186a3f4440139c32d03286d8119132 238 Gene3D G3DSA:3.30.1270.10 210 236 6.7E-34 T 22-04-2016 IPR026563 Transcriptional regulator TACO1-like, domain 2 SII_RS07330 06186a3f4440139c32d03286d8119132 238 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 1 237 30.374 T 22-04-2016 IPR002876 Transcriptional regulator TACO1-like SII_RS07330 06186a3f4440139c32d03286d8119132 238 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 1 236 1.0E-67 T 22-04-2016 IPR002876 Transcriptional regulator TACO1-like SII_RS07330 06186a3f4440139c32d03286d8119132 238 PANTHER PTHR12532 1 236 2.7E-150 T 22-04-2016 IPR002876 Transcriptional regulator TACO1-like SII_RS07330 06186a3f4440139c32d03286d8119132 238 Gene3D G3DSA:1.10.10.200 1 77 2.5E-28 T 22-04-2016 IPR017856 Integrase, N-terminal zinc-binding domain-like SII_RS07330 06186a3f4440139c32d03286d8119132 238 SUPERFAMILY SSF75625 1 236 1.44E-80 T 22-04-2016 IPR029072 YebC-like SII_RS06840 de3acbdef301998f8b58f1715190c55f 149 Pfam PF01592 NifU-like N terminal domain 10 128 1.2E-26 T 22-04-2016 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 SII_RS06840 de3acbdef301998f8b58f1715190c55f 149 SUPERFAMILY SSF82649 2 142 2.62E-45 T 22-04-2016 SII_RS06840 de3acbdef301998f8b58f1715190c55f 149 PANTHER PTHR10093 1 142 1.0E-37 T 22-04-2016 SII_RS06840 de3acbdef301998f8b58f1715190c55f 149 Gene3D G3DSA:3.90.1010.10 9 145 2.5E-41 T 22-04-2016 SII_RS06840 de3acbdef301998f8b58f1715190c55f 149 TIGRFAM TIGR01994 SUF_scaf_2: SUF system FeS assembly protein, NifU family 6 140 9.8E-52 T 22-04-2016 SII_RS01940 63a6dab9c9f0a21c67725aeaa0d61027 297 Gene3D G3DSA:1.10.10.10 2 61 4.3E-11 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SII_RS01940 63a6dab9c9f0a21c67725aeaa0d61027 297 Pfam PF13280 WYL domain 127 291 1.4E-32 T 22-04-2016 IPR026881 WYL domain SII_RS01940 63a6dab9c9f0a21c67725aeaa0d61027 297 PANTHER PTHR30595 1 237 1.2E-36 T 22-04-2016 SII_RS01940 63a6dab9c9f0a21c67725aeaa0d61027 297 Pfam PF08279 HTH domain 5 56 2.8E-11 T 22-04-2016 IPR013196 Helix-turn-helix, type 11 SII_RS01940 63a6dab9c9f0a21c67725aeaa0d61027 297 PANTHER PTHR30595:SF5 1 237 1.2E-36 T 22-04-2016 SII_RS01940 63a6dab9c9f0a21c67725aeaa0d61027 297 PIRSF PIRSF016838 2 297 1.9E-20 T 22-04-2016 IPR028349 Protein PafC SII_RS01940 63a6dab9c9f0a21c67725aeaa0d61027 297 SUPERFAMILY SSF46785 3 58 5.78E-10 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SII_RS08825 b5c2159e2a5b279228e2228c423ea607 881 SMART SM00475 5 270 5.1E-146 T 22-04-2016 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 SII_RS08825 b5c2159e2a5b279228e2228c423ea607 881 Pfam PF00476 DNA polymerase family A 501 879 4.1E-152 T 22-04-2016 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SII_RS08825 b5c2159e2a5b279228e2228c423ea607 881 SUPERFAMILY SSF88723 2 178 2.18E-50 T 22-04-2016 IPR029060 PIN domain-like SII_RS08825 b5c2159e2a5b279228e2228c423ea607 881 Gene3D G3DSA:3.30.420.10 305 493 1.3E-48 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SII_RS08825 b5c2159e2a5b279228e2228c423ea607 881 PANTHER PTHR10133:SF27 2 881 0.0 T 22-04-2016 SII_RS08825 b5c2159e2a5b279228e2228c423ea607 881 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 6 178 4.2E-50 T 22-04-2016 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 SII_RS08825 b5c2159e2a5b279228e2228c423ea607 881 Gene3D G3DSA:3.30.70.370 614 663 2.4E-62 T 22-04-2016 SII_RS08825 b5c2159e2a5b279228e2228c423ea607 881 Gene3D G3DSA:3.30.70.370 771 881 2.4E-62 T 22-04-2016 SII_RS08825 b5c2159e2a5b279228e2228c423ea607 881 Gene3D G3DSA:3.40.50.1010 5 193 1.8E-66 T 22-04-2016 IPR029060 PIN domain-like SII_RS08825 b5c2159e2a5b279228e2228c423ea607 881 SUPERFAMILY SSF53098 307 470 1.82E-31 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SII_RS08825 b5c2159e2a5b279228e2228c423ea607 881 Gene3D G3DSA:1.20.1060.10 495 613 7.0E-37 T 22-04-2016 SII_RS08825 b5c2159e2a5b279228e2228c423ea607 881 TIGRFAM TIGR00593 pola: DNA polymerase I 7 881 0.0 T 22-04-2016 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SII_RS08825 b5c2159e2a5b279228e2228c423ea607 881 SMART SM00279 181 216 8.2E-16 T 22-04-2016 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 SII_RS08825 b5c2159e2a5b279228e2228c423ea607 881 SUPERFAMILY SSF56672 473 881 3.89E-152 T 22-04-2016 SII_RS08825 b5c2159e2a5b279228e2228c423ea607 881 SMART SM00474 304 469 1.9E-16 T 22-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 SII_RS08825 b5c2159e2a5b279228e2228c423ea607 881 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 179 271 6.1E-32 T 22-04-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 SII_RS08825 b5c2159e2a5b279228e2228c423ea607 881 PRINTS PR00868 DNA-polymerase family A (pol I) signature 652 675 4.5E-80 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SII_RS08825 b5c2159e2a5b279228e2228c423ea607 881 PRINTS PR00868 DNA-polymerase family A (pol I) signature 828 841 4.5E-80 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SII_RS08825 b5c2159e2a5b279228e2228c423ea607 881 PRINTS PR00868 DNA-polymerase family A (pol I) signature 606 628 4.5E-80 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SII_RS08825 b5c2159e2a5b279228e2228c423ea607 881 PRINTS PR00868 DNA-polymerase family A (pol I) signature 682 695 4.5E-80 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SII_RS08825 b5c2159e2a5b279228e2228c423ea607 881 PRINTS PR00868 DNA-polymerase family A (pol I) signature 766 777 4.5E-80 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SII_RS08825 b5c2159e2a5b279228e2228c423ea607 881 PRINTS PR00868 DNA-polymerase family A (pol I) signature 629 644 4.5E-80 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SII_RS08825 b5c2159e2a5b279228e2228c423ea607 881 PRINTS PR00868 DNA-polymerase family A (pol I) signature 744 755 4.5E-80 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SII_RS08825 b5c2159e2a5b279228e2228c423ea607 881 PRINTS PR00868 DNA-polymerase family A (pol I) signature 798 814 4.5E-80 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SII_RS08825 b5c2159e2a5b279228e2228c423ea607 881 PRINTS PR00868 DNA-polymerase family A (pol I) signature 707 732 4.5E-80 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SII_RS08825 b5c2159e2a5b279228e2228c423ea607 881 SMART SM00482 637 845 1.6E-117 T 22-04-2016 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SII_RS08825 b5c2159e2a5b279228e2228c423ea607 881 Gene3D G3DSA:1.10.150.20 664 770 1.9E-38 T 22-04-2016 SII_RS08825 b5c2159e2a5b279228e2228c423ea607 881 SUPERFAMILY SSF47807 178 281 1.64E-32 T 22-04-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 SII_RS08825 b5c2159e2a5b279228e2228c423ea607 881 Gene3D G3DSA:1.10.150.20 194 254 3.5E-30 T 22-04-2016 SII_RS08825 b5c2159e2a5b279228e2228c423ea607 881 ProSitePatterns PS00447 DNA polymerase family A signature. 707 726 - T 22-04-2016 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SII_RS08825 b5c2159e2a5b279228e2228c423ea607 881 PANTHER PTHR10133 2 881 0.0 T 22-04-2016 SII_RS08475 1b71f63b1f38cb4ac828d61c0b023782 1188 Pfam PF04565 RNA polymerase Rpb2, domain 3 473 538 1.3E-28 T 22-04-2016 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SII_RS08475 1b71f63b1f38cb4ac828d61c0b023782 1188 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 216 892 1.2E-293 T 22-04-2016 IPR010243 DNA-directed RNA polymerase, beta subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SII_RS08475 1b71f63b1f38cb4ac828d61c0b023782 1188 Gene3D G3DSA:3.90.1100.10 621 675 3.0E-145 T 22-04-2016 SII_RS08475 1b71f63b1f38cb4ac828d61c0b023782 1188 Gene3D G3DSA:3.90.1100.10 405 551 3.0E-145 T 22-04-2016 SII_RS08475 1b71f63b1f38cb4ac828d61c0b023782 1188 Gene3D G3DSA:3.90.1100.10 21 140 3.0E-145 T 22-04-2016 SII_RS08475 1b71f63b1f38cb4ac828d61c0b023782 1188 PANTHER PTHR20856:SF20 2 291 0.0 T 22-04-2016 SII_RS08475 1b71f63b1f38cb4ac828d61c0b023782 1188 PANTHER PTHR20856:SF20 383 1147 0.0 T 22-04-2016 SII_RS08475 1b71f63b1f38cb4ac828d61c0b023782 1188 Pfam PF04563 RNA polymerase beta subunit 28 460 6.7E-26 T 22-04-2016 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SII_RS08475 1b71f63b1f38cb4ac828d61c0b023782 1188 Pfam PF04561 RNA polymerase Rpb2, domain 2 371 414 6.0E-7 T 22-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SII_RS08475 1b71f63b1f38cb4ac828d61c0b023782 1188 Pfam PF04561 RNA polymerase Rpb2, domain 2 140 293 5.5E-23 T 22-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SII_RS08475 1b71f63b1f38cb4ac828d61c0b023782 1188 Pfam PF00562 RNA polymerase Rpb2, domain 6 679 1065 4.6E-163 T 22-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SII_RS08475 1b71f63b1f38cb4ac828d61c0b023782 1188 Gene3D G3DSA:2.40.50.150 782 914 9.3E-58 T 22-04-2016 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SII_RS08475 1b71f63b1f38cb4ac828d61c0b023782 1188 PANTHER PTHR20856 2 291 0.0 T 22-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SII_RS08475 1b71f63b1f38cb4ac828d61c0b023782 1188 Gene3D G3DSA:2.40.270.10 915 1043 4.2E-80 T 22-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SII_RS08475 1b71f63b1f38cb4ac828d61c0b023782 1188 Gene3D G3DSA:2.40.270.10 748 775 4.2E-80 T 22-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SII_RS08475 1b71f63b1f38cb4ac828d61c0b023782 1188 Gene3D G3DSA:2.40.50.100 677 747 9.3E-27 T 22-04-2016 SII_RS08475 1b71f63b1f38cb4ac828d61c0b023782 1188 SUPERFAMILY SSF64484 382 1151 0.0 T 22-04-2016 SII_RS08475 1b71f63b1f38cb4ac828d61c0b023782 1188 SUPERFAMILY SSF64484 14 291 0.0 T 22-04-2016 SII_RS08475 1b71f63b1f38cb4ac828d61c0b023782 1188 Pfam PF10385 RNA polymerase beta subunit external 1 domain 551 618 6.8E-24 T 22-04-2016 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SII_RS08475 1b71f63b1f38cb4ac828d61c0b023782 1188 Gene3D G3DSA:3.90.1110.10 142 300 3.8E-64 T 22-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SII_RS08475 1b71f63b1f38cb4ac828d61c0b023782 1188 Gene3D G3DSA:3.90.1110.10 380 404 3.8E-64 T 22-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SII_RS08475 1b71f63b1f38cb4ac828d61c0b023782 1188 PANTHER PTHR20856 383 1147 0.0 T 22-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SII_RS08475 1b71f63b1f38cb4ac828d61c0b023782 1188 Pfam PF04560 RNA polymerase Rpb2, domain 7 1067 1141 1.8E-25 T 22-04-2016 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SII_RS08475 1b71f63b1f38cb4ac828d61c0b023782 1188 ProSitePatterns PS01166 RNA polymerases beta chain signature. 918 930 - T 22-04-2016 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SII_RS08475 1b71f63b1f38cb4ac828d61c0b023782 1188 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 15 1143 12.252 T 22-04-2016 IPR010243 DNA-directed RNA polymerase, beta subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SII_RS08475 1b71f63b1f38cb4ac828d61c0b023782 1188 Gene3D G3DSA:2.30.150.10 552 618 5.0E-26 T 22-04-2016 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SII_RS06810 c355ded4cef7da91ebaa004848f45702 303 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 56 66 3.6E-71 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SII_RS06810 c355ded4cef7da91ebaa004848f45702 303 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 190 206 3.6E-71 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SII_RS06810 c355ded4cef7da91ebaa004848f45702 303 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 36 51 3.6E-71 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SII_RS06810 c355ded4cef7da91ebaa004848f45702 303 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 123 135 3.6E-71 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SII_RS06810 c355ded4cef7da91ebaa004848f45702 303 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 138 162 3.6E-71 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SII_RS06810 c355ded4cef7da91ebaa004848f45702 303 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 3 25 3.6E-71 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SII_RS06810 c355ded4cef7da91ebaa004848f45702 303 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 101 109 3.6E-71 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SII_RS06810 c355ded4cef7da91ebaa004848f45702 303 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 262 280 3.6E-71 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SII_RS06810 c355ded4cef7da91ebaa004848f45702 303 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 228 249 3.6E-71 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SII_RS06810 c355ded4cef7da91ebaa004848f45702 303 Gene3D G3DSA:3.50.50.60 235 300 1.9E-48 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SII_RS06810 c355ded4cef7da91ebaa004848f45702 303 Gene3D G3DSA:3.50.50.60 1 114 1.9E-48 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SII_RS06810 c355ded4cef7da91ebaa004848f45702 303 PANTHER PTHR22912 1 301 5.9E-136 T 22-04-2016 SII_RS06810 c355ded4cef7da91ebaa004848f45702 303 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 2 299 9.1E-117 T 22-04-2016 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00240+1.8.1.9|KEGG: 00450+1.8.1.9 SII_RS06810 c355ded4cef7da91ebaa004848f45702 303 SUPERFAMILY SSF51905 1 298 2.9E-55 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SII_RS06810 c355ded4cef7da91ebaa004848f45702 303 Gene3D G3DSA:3.50.50.60 115 234 1.3E-35 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SII_RS06810 c355ded4cef7da91ebaa004848f45702 303 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 1.6E-35 T 22-04-2016 SII_RS06810 c355ded4cef7da91ebaa004848f45702 303 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 252 274 1.6E-35 T 22-04-2016 SII_RS06810 c355ded4cef7da91ebaa004848f45702 303 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 226 242 1.6E-35 T 22-04-2016 SII_RS06810 c355ded4cef7da91ebaa004848f45702 303 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 142 160 1.6E-35 T 22-04-2016 SII_RS06810 c355ded4cef7da91ebaa004848f45702 303 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 100 118 1.6E-35 T 22-04-2016 SII_RS06810 c355ded4cef7da91ebaa004848f45702 303 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 2 288 8.3E-52 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SII_RS06810 c355ded4cef7da91ebaa004848f45702 303 PANTHER PTHR22912:SF48 1 301 5.9E-136 T 22-04-2016 SII_RS06810 c355ded4cef7da91ebaa004848f45702 303 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 130 150 - T 22-04-2016 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 SII_RS01680 fdf1cb3594a36747d1c42df298754020 237 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 25 199 2.1E-46 T 22-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 SII_RS01680 fdf1cb3594a36747d1c42df298754020 237 PANTHER PTHR31760:SF0 4 237 6.3E-83 T 22-04-2016 SII_RS01680 fdf1cb3594a36747d1c42df298754020 237 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 14 215 27.551 T 22-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 SII_RS01680 fdf1cb3594a36747d1c42df298754020 237 PIRSF PIRSF003078 1 220 3.8E-52 T 22-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 SII_RS01680 fdf1cb3594a36747d1c42df298754020 237 Pfam PF02527 rRNA small subunit methyltransferase G 22 196 2.4E-48 T 22-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 SII_RS01680 fdf1cb3594a36747d1c42df298754020 237 SUPERFAMILY SSF53335 1 237 8.73E-46 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SII_RS01680 fdf1cb3594a36747d1c42df298754020 237 Gene3D G3DSA:3.40.50.150 3 237 3.3E-76 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SII_RS01680 fdf1cb3594a36747d1c42df298754020 237 PANTHER PTHR31760 4 237 6.3E-83 T 22-04-2016 SII_RS00540 d931bbd30870ac083c7e4ff65861849e 596 Gene3D G3DSA:3.40.50.300 187 436 3.9E-104 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS00540 d931bbd30870ac083c7e4ff65861849e 596 SUPERFAMILY SSF50615 2 71 4.19E-11 T 22-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SII_RS00540 d931bbd30870ac083c7e4ff65861849e 596 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 6 68 1.0E-11 T 22-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SII_RS00540 d931bbd30870ac083c7e4ff65861849e 596 Gene3D G3DSA:1.10.1140.10 539 593 5.1E-29 T 22-04-2016 IPR024034 ATPase, F1 complex beta subunit/V1 complex, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SII_RS00540 d931bbd30870ac083c7e4ff65861849e 596 Gene3D G3DSA:1.10.1140.10 453 507 5.1E-29 T 22-04-2016 IPR024034 ATPase, F1 complex beta subunit/V1 complex, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SII_RS00540 d931bbd30870ac083c7e4ff65861849e 596 PANTHER PTHR15184 183 582 2.0E-258 T 22-04-2016 SII_RS00540 d931bbd30870ac083c7e4ff65861849e 596 Hamap MF_00309 V-type ATP synthase alpha chain [atpA]. 1 589 50.358 T 22-04-2016 IPR022878 V-type ATP synthase catalytic alpha chain GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SII_RS00540 d931bbd30870ac083c7e4ff65861849e 596 PANTHER PTHR15184:SF7 3 93 2.0E-258 T 22-04-2016 SII_RS00540 d931bbd30870ac083c7e4ff65861849e 596 PANTHER PTHR15184:SF7 132 137 2.0E-258 T 22-04-2016 SII_RS00540 d931bbd30870ac083c7e4ff65861849e 596 PANTHER PTHR15184 3 93 2.0E-258 T 22-04-2016 SII_RS00540 d931bbd30870ac083c7e4ff65861849e 596 PANTHER PTHR15184 132 137 2.0E-258 T 22-04-2016 SII_RS00540 d931bbd30870ac083c7e4ff65861849e 596 SUPERFAMILY SSF47917 454 533 3.92E-24 T 22-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SII_RS00540 d931bbd30870ac083c7e4ff65861849e 596 Pfam PF16886 ATPsynthase alpha/beta subunit N-term extension 84 204 3.6E-39 T 22-04-2016 IPR031686 ATPsynthase alpha/beta subunit, N-terminal extension KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SII_RS00540 d931bbd30870ac083c7e4ff65861849e 596 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 213 436 2.2E-95 T 22-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SII_RS00540 d931bbd30870ac083c7e4ff65861849e 596 SUPERFAMILY SSF52540 188 441 9.94E-84 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS00540 d931bbd30870ac083c7e4ff65861849e 596 PANTHER PTHR15184:SF7 183 582 2.0E-258 T 22-04-2016 SII_RS06715 5347ceb1b6ae8f24e3d00484eb2a15f1 793 SMART SM00490 559 652 1.5E-8 T 22-04-2016 IPR001650 Helicase, C-terminal SII_RS06715 5347ceb1b6ae8f24e3d00484eb2a15f1 793 SMART SM00487 253 449 1.1E-23 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain SII_RS06715 5347ceb1b6ae8f24e3d00484eb2a15f1 793 SUPERFAMILY SSF52540 202 437 1.33E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS06715 5347ceb1b6ae8f24e3d00484eb2a15f1 793 TIGRFAM TIGR00595 priA: primosomal protein N' 280 789 1.8E-199 T 22-04-2016 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 SII_RS06715 5347ceb1b6ae8f24e3d00484eb2a15f1 793 Gene3D G3DSA:3.40.50.300 241 442 4.0E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS06715 5347ceb1b6ae8f24e3d00484eb2a15f1 793 Hamap MF_00983 Probable primosomal protein N' [priA]. 9 792 24.335 T 22-04-2016 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 SII_RS06715 5347ceb1b6ae8f24e3d00484eb2a15f1 793 Pfam PF00271 Helicase conserved C-terminal domain 561 651 2.2E-9 T 22-04-2016 IPR001650 Helicase, C-terminal SII_RS06715 5347ceb1b6ae8f24e3d00484eb2a15f1 793 SUPERFAMILY SSF52540 521 699 3.95E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS06715 5347ceb1b6ae8f24e3d00484eb2a15f1 793 Pfam PF04851 Type III restriction enzyme, res subunit 256 419 2.1E-17 T 22-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 SII_RS06715 5347ceb1b6ae8f24e3d00484eb2a15f1 793 Gene3D G3DSA:3.40.50.300 519 695 3.6E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS06715 5347ceb1b6ae8f24e3d00484eb2a15f1 793 PANTHER PTHR30580 1 793 3.9E-278 T 22-04-2016 SII_RS09045 d7aca6e355ee18b6fc4fc3dd27c057f2 852 SUPERFAMILY SSF55271 4 114 3.53E-41 T 22-04-2016 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 SII_RS09045 d7aca6e355ee18b6fc4fc3dd27c057f2 852 Gene3D G3DSA:1.10.1420.10 249 455 1.5E-55 T 22-04-2016 SII_RS09045 d7aca6e355ee18b6fc4fc3dd27c057f2 852 Pfam PF05188 MutS domain II 126 239 4.8E-13 T 22-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 SII_RS09045 d7aca6e355ee18b6fc4fc3dd27c057f2 852 SUPERFAMILY SSF52540 554 786 4.31E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS09045 d7aca6e355ee18b6fc4fc3dd27c057f2 852 SUPERFAMILY SSF53150 118 265 1.44E-30 T 22-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 SII_RS09045 d7aca6e355ee18b6fc4fc3dd27c057f2 852 SMART SM00534 595 782 3.7E-113 T 22-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 SII_RS09045 d7aca6e355ee18b6fc4fc3dd27c057f2 852 Pfam PF05190 MutS family domain IV 415 505 2.8E-26 T 22-04-2016 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 SII_RS09045 d7aca6e355ee18b6fc4fc3dd27c057f2 852 Gene3D G3DSA:3.40.50.300 555 786 1.9E-82 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS09045 d7aca6e355ee18b6fc4fc3dd27c057f2 852 SUPERFAMILY SSF48334 253 550 1.1E-89 T 22-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 SII_RS09045 d7aca6e355ee18b6fc4fc3dd27c057f2 852 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 676 692 - T 22-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 SII_RS09045 d7aca6e355ee18b6fc4fc3dd27c057f2 852 SMART SM00533 270 578 1.9E-113 T 22-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 SII_RS09045 d7aca6e355ee18b6fc4fc3dd27c057f2 852 Gene3D G3DSA:3.40.1170.10 3 118 4.8E-49 T 22-04-2016 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 SII_RS09045 d7aca6e355ee18b6fc4fc3dd27c057f2 852 Pfam PF01624 MutS domain I 8 118 2.1E-43 T 22-04-2016 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 SII_RS09045 d7aca6e355ee18b6fc4fc3dd27c057f2 852 Gene3D G3DSA:3.30.420.110 125 246 5.2E-28 T 22-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 SII_RS09045 d7aca6e355ee18b6fc4fc3dd27c057f2 852 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 7 850 0.0 T 22-04-2016 IPR005748 DNA mismatch repair protein MutS, type 1 GO:0005524|GO:0006298|GO:0030983 SII_RS09045 d7aca6e355ee18b6fc4fc3dd27c057f2 852 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 6 844 23.911 T 22-04-2016 IPR005748 DNA mismatch repair protein MutS, type 1 GO:0005524|GO:0006298|GO:0030983 SII_RS09045 d7aca6e355ee18b6fc4fc3dd27c057f2 852 Pfam PF05192 MutS domain III 255 546 5.7E-45 T 22-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 SII_RS09045 d7aca6e355ee18b6fc4fc3dd27c057f2 852 PANTHER PTHR11361 1 852 0.0 T 22-04-2016 SII_RS09045 d7aca6e355ee18b6fc4fc3dd27c057f2 852 Pfam PF00488 MutS domain V 598 785 2.1E-82 T 22-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 SII_RS09045 d7aca6e355ee18b6fc4fc3dd27c057f2 852 PANTHER PTHR11361:SF86 1 852 0.0 T 22-04-2016 SII_RS07660 311ffc84ea0b87d52f26591fb1135fe8 610 SUPERFAMILY SSF53067 161 351 9.26E-67 T 22-04-2016 SII_RS07660 311ffc84ea0b87d52f26591fb1135fe8 610 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 610 36.1 T 22-04-2016 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 SII_RS07660 311ffc84ea0b87d52f26591fb1135fe8 610 Gene3D G3DSA:3.30.30.30 39 98 6.0E-12 T 22-04-2016 SII_RS07660 311ffc84ea0b87d52f26591fb1135fe8 610 Gene3D G3DSA:2.60.34.10 360 501 8.9E-71 T 22-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain SII_RS07660 311ffc84ea0b87d52f26591fb1135fe8 610 SUPERFAMILY SSF53067 1 157 4.7E-56 T 22-04-2016 SII_RS07660 311ffc84ea0b87d52f26591fb1135fe8 610 PRINTS PR00301 70kDa heat shock protein signature 335 355 5.7E-78 T 22-04-2016 IPR013126 Heat shock protein 70 family SII_RS07660 311ffc84ea0b87d52f26591fb1135fe8 610 PRINTS PR00301 70kDa heat shock protein signature 439 455 5.7E-78 T 22-04-2016 IPR013126 Heat shock protein 70 family SII_RS07660 311ffc84ea0b87d52f26591fb1135fe8 610 PRINTS PR00301 70kDa heat shock protein signature 358 377 5.7E-78 T 22-04-2016 IPR013126 Heat shock protein 70 family SII_RS07660 311ffc84ea0b87d52f26591fb1135fe8 610 PRINTS PR00301 70kDa heat shock protein signature 3 16 5.7E-78 T 22-04-2016 IPR013126 Heat shock protein 70 family SII_RS07660 311ffc84ea0b87d52f26591fb1135fe8 610 PRINTS PR00301 70kDa heat shock protein signature 53 61 5.7E-78 T 22-04-2016 IPR013126 Heat shock protein 70 family SII_RS07660 311ffc84ea0b87d52f26591fb1135fe8 610 PRINTS PR00301 70kDa heat shock protein signature 304 320 5.7E-78 T 22-04-2016 IPR013126 Heat shock protein 70 family SII_RS07660 311ffc84ea0b87d52f26591fb1135fe8 610 PRINTS PR00301 70kDa heat shock protein signature 172 182 5.7E-78 T 22-04-2016 IPR013126 Heat shock protein 70 family SII_RS07660 311ffc84ea0b87d52f26591fb1135fe8 610 PRINTS PR00301 70kDa heat shock protein signature 31 43 5.7E-78 T 22-04-2016 IPR013126 Heat shock protein 70 family SII_RS07660 311ffc84ea0b87d52f26591fb1135fe8 610 PRINTS PR00301 70kDa heat shock protein signature 112 132 5.7E-78 T 22-04-2016 IPR013126 Heat shock protein 70 family SII_RS07660 311ffc84ea0b87d52f26591fb1135fe8 610 Gene3D G3DSA:3.90.640.10 200 285 8.4E-31 T 22-04-2016 SII_RS07660 311ffc84ea0b87d52f26591fb1135fe8 610 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 573 1.7E-282 T 22-04-2016 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 SII_RS07660 311ffc84ea0b87d52f26591fb1135fe8 610 SUPERFAMILY SSF100934 477 576 4.19E-11 T 22-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain SII_RS07660 311ffc84ea0b87d52f26591fb1135fe8 610 Gene3D G3DSA:3.30.420.40 99 164 2.2E-58 T 22-04-2016 SII_RS07660 311ffc84ea0b87d52f26591fb1135fe8 610 Gene3D G3DSA:3.30.420.40 3 38 2.2E-58 T 22-04-2016 SII_RS07660 311ffc84ea0b87d52f26591fb1135fe8 610 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 166 179 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site SII_RS07660 311ffc84ea0b87d52f26591fb1135fe8 610 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 307 321 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site SII_RS07660 311ffc84ea0b87d52f26591fb1135fe8 610 SUPERFAMILY SSF100920 354 510 1.14E-60 T 22-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain SII_RS07660 311ffc84ea0b87d52f26591fb1135fe8 610 PANTHER PTHR19375 2 609 0.0 T 22-04-2016 SII_RS07660 311ffc84ea0b87d52f26591fb1135fe8 610 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site SII_RS07660 311ffc84ea0b87d52f26591fb1135fe8 610 Gene3D G3DSA:3.30.420.40 165 199 1.3E-34 T 22-04-2016 SII_RS07660 311ffc84ea0b87d52f26591fb1135fe8 610 Gene3D G3DSA:3.30.420.40 289 331 1.3E-34 T 22-04-2016 SII_RS07660 311ffc84ea0b87d52f26591fb1135fe8 610 Gene3D G3DSA:1.20.1270.10 502 573 4.6E-19 T 22-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain SII_RS07660 311ffc84ea0b87d52f26591fb1135fe8 610 PANTHER PTHR19375:SF173 2 609 0.0 T 22-04-2016 SII_RS07660 311ffc84ea0b87d52f26591fb1135fe8 610 Pfam PF00012 Hsp70 protein 76 573 3.4E-217 T 22-04-2016 IPR013126 Heat shock protein 70 family SII_RS07660 311ffc84ea0b87d52f26591fb1135fe8 610 Pfam PF00012 Hsp70 protein 4 74 9.5E-25 T 22-04-2016 IPR013126 Heat shock protein 70 family SII_RS02970 30f6a61ec6f94fe90fe446f9e19c2084 261 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 19 214 3.7E-46 T 22-04-2016 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 UniPathway: UPA00148 SII_RS02970 30f6a61ec6f94fe90fe446f9e19c2084 261 PANTHER PTHR21343:SF9 1 261 2.4E-107 T 22-04-2016 SII_RS02970 30f6a61ec6f94fe90fe446f9e19c2084 261 SUPERFAMILY SSF52317 34 207 5.03E-27 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like SII_RS02970 30f6a61ec6f94fe90fe446f9e19c2084 261 Gene3D G3DSA:3.40.50.880 38 225 7.0E-16 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like SII_RS02970 30f6a61ec6f94fe90fe446f9e19c2084 261 PANTHER PTHR21343 1 261 2.4E-107 T 22-04-2016 SII_RS08150 cd36e854fae6e48597c918b2719af520 423 SUPERFAMILY SSF48019 237 418 1.87E-67 T 22-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 SII_RS08150 cd36e854fae6e48597c918b2719af520 423 Gene3D G3DSA:1.10.8.60 141 208 4.8E-10 T 22-04-2016 SII_RS08150 cd36e854fae6e48597c918b2719af520 423 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 42 144 2.5E-14 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 SII_RS08150 cd36e854fae6e48597c918b2719af520 423 Gene3D G3DSA:1.20.272.10 233 330 7.9E-39 T 22-04-2016 SII_RS08150 cd36e854fae6e48597c918b2719af520 423 SMART SM00382 38 150 1.9E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain SII_RS08150 cd36e854fae6e48597c918b2719af520 423 Gene3D G3DSA:3.40.50.300 5 140 1.1E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS08150 cd36e854fae6e48597c918b2719af520 423 PANTHER PTHR13779 5 404 1.2E-151 T 22-04-2016 SII_RS08150 cd36e854fae6e48597c918b2719af520 423 SUPERFAMILY SSF52540 3 220 1.35E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS08150 cd36e854fae6e48597c918b2719af520 423 Pfam PF12002 MgsA AAA+ ATPase C terminal 252 412 1.7E-61 T 22-04-2016 IPR021886 MgsA AAA+ ATPase C-terminal SII_RS08150 cd36e854fae6e48597c918b2719af520 423 Pfam PF16193 AAA C-terminal domain 173 251 1.3E-21 T 22-04-2016 IPR032423 AAA ATPase, C-terminal domain SII_RS08150 cd36e854fae6e48597c918b2719af520 423 PANTHER PTHR13779:SF7 5 404 1.2E-151 T 22-04-2016 SII_RS08150 cd36e854fae6e48597c918b2719af520 423 Gene3D G3DSA:1.10.3710.10 331 422 1.8E-27 T 22-04-2016 SII_RS01075 ffd27e4c00655801b250d89e0983e92d 246 SMART SM00422 2 70 1.5E-27 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SII_RS01075 ffd27e4c00655801b250d89e0983e92d 246 Gene3D G3DSA:1.10.1660.10 1 55 1.4E-26 T 22-04-2016 SII_RS01075 ffd27e4c00655801b250d89e0983e92d 246 Gene3D G3DSA:1.10.490.50 154 244 2.7E-29 T 22-04-2016 IPR012925 TipAS antibiotic-recognition domain SII_RS01075 ffd27e4c00655801b250d89e0983e92d 246 Pfam PF13411 MerR HTH family regulatory protein 2 69 1.0E-17 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SII_RS01075 ffd27e4c00655801b250d89e0983e92d 246 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 14 27 4.0E-7 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SII_RS01075 ffd27e4c00655801b250d89e0983e92d 246 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 4.0E-7 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SII_RS01075 ffd27e4c00655801b250d89e0983e92d 246 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 3 14 4.0E-7 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SII_RS01075 ffd27e4c00655801b250d89e0983e92d 246 Pfam PF07739 TipAS antibiotic-recognition domain 129 240 2.4E-22 T 22-04-2016 IPR012925 TipAS antibiotic-recognition domain SII_RS01075 ffd27e4c00655801b250d89e0983e92d 246 PANTHER PTHR30204:SF1 1 244 2.6E-99 T 22-04-2016 SII_RS01075 ffd27e4c00655801b250d89e0983e92d 246 SUPERFAMILY SSF46955 2 105 8.42E-30 T 22-04-2016 IPR009061 Putative DNA-binding domain SII_RS01075 ffd27e4c00655801b250d89e0983e92d 246 Gene3D G3DSA:1.10.1660.10 56 104 4.0E-11 T 22-04-2016 SII_RS01075 ffd27e4c00655801b250d89e0983e92d 246 SUPERFAMILY SSF89082 155 244 8.11E-23 T 22-04-2016 IPR012925 TipAS antibiotic-recognition domain SII_RS01075 ffd27e4c00655801b250d89e0983e92d 246 PANTHER PTHR30204 1 244 2.6E-99 T 22-04-2016 SII_RS04835 5b92798a6f3c0b20696a720bf1e60120 360 PRINTS PR00599 Methionine aminopeptidase-1 signature 311 323 9.5E-5 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase SII_RS04835 5b92798a6f3c0b20696a720bf1e60120 360 PRINTS PR00599 Methionine aminopeptidase-1 signature 213 229 9.5E-5 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase SII_RS04835 5b92798a6f3c0b20696a720bf1e60120 360 PRINTS PR00599 Methionine aminopeptidase-1 signature 191 204 9.5E-5 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase SII_RS04835 5b92798a6f3c0b20696a720bf1e60120 360 Gene3D G3DSA:3.40.350.10 3 132 4.1E-27 T 22-04-2016 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal SII_RS04835 5b92798a6f3c0b20696a720bf1e60120 360 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 289 301 - T 22-04-2016 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site SII_RS04835 5b92798a6f3c0b20696a720bf1e60120 360 Pfam PF00557 Metallopeptidase family M24 143 343 3.0E-57 T 22-04-2016 IPR000994 Peptidase M24, structural domain SII_RS04835 5b92798a6f3c0b20696a720bf1e60120 360 PANTHER PTHR10804:SF106 1 360 1.1E-184 T 22-04-2016 SII_RS04835 5b92798a6f3c0b20696a720bf1e60120 360 SUPERFAMILY SSF53092 2 132 1.1E-27 T 22-04-2016 IPR028980 Creatinase/Aminopeptidase P, N-terminal SII_RS04835 5b92798a6f3c0b20696a720bf1e60120 360 PANTHER PTHR10804 1 360 1.1E-184 T 22-04-2016 SII_RS04835 5b92798a6f3c0b20696a720bf1e60120 360 Pfam PF01321 Creatinase/Prolidase N-terminal domain 4 134 4.6E-19 T 22-04-2016 IPR000587 Creatinase, N-terminal GO:0016787 SII_RS04835 5b92798a6f3c0b20696a720bf1e60120 360 SUPERFAMILY SSF55920 133 357 3.79E-77 T 22-04-2016 IPR000994 Peptidase M24, structural domain SII_RS04835 5b92798a6f3c0b20696a720bf1e60120 360 Gene3D G3DSA:3.90.230.10 134 356 2.2E-78 T 22-04-2016 IPR000994 Peptidase M24, structural domain SII_RS02395 10dc86dc6f376d0753e24ef659ff9edd 292 Gene3D G3DSA:1.10.287.80 240 286 9.4E-26 T 22-04-2016 SII_RS02395 10dc86dc6f376d0753e24ef659ff9edd 292 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 277 290 - T 22-04-2016 IPR023632 ATPase, F1 complex, gamma subunit conserved site SII_RS02395 10dc86dc6f376d0753e24ef659ff9edd 292 Hamap MF_00815 ATP synthase gamma chain [atpG]. 2 291 32.115 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 SII_RS02395 10dc86dc6f376d0753e24ef659ff9edd 292 Pfam PF00231 ATP synthase 4 291 9.4E-83 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 SII_RS02395 10dc86dc6f376d0753e24ef659ff9edd 292 Gene3D G3DSA:3.40.1380.10 69 194 6.5E-40 T 22-04-2016 SII_RS02395 10dc86dc6f376d0753e24ef659ff9edd 292 PANTHER PTHR11693 1 292 6.1E-99 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 SII_RS02395 10dc86dc6f376d0753e24ef659ff9edd 292 Gene3D G3DSA:1.10.287.80 20 61 4.8E-23 T 22-04-2016 SII_RS02395 10dc86dc6f376d0753e24ef659ff9edd 292 Gene3D G3DSA:1.10.287.80 206 239 4.8E-23 T 22-04-2016 SII_RS02395 10dc86dc6f376d0753e24ef659ff9edd 292 PRINTS PR00126 ATP synthase gamma subunit signature 238 257 1.8E-35 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 SII_RS02395 10dc86dc6f376d0753e24ef659ff9edd 292 PRINTS PR00126 ATP synthase gamma subunit signature 77 96 1.8E-35 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 SII_RS02395 10dc86dc6f376d0753e24ef659ff9edd 292 PRINTS PR00126 ATP synthase gamma subunit signature 169 186 1.8E-35 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 SII_RS02395 10dc86dc6f376d0753e24ef659ff9edd 292 PRINTS PR00126 ATP synthase gamma subunit signature 269 290 1.8E-35 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 SII_RS02395 10dc86dc6f376d0753e24ef659ff9edd 292 SUPERFAMILY SSF52943 4 291 2.22E-82 T 22-04-2016 IPR023633 ATPase, F1 complex, gamma subunit domain SII_RS02395 10dc86dc6f376d0753e24ef659ff9edd 292 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 4 291 5.3E-97 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 SII_RS00690 f97c6f8addbd93be7f7b6c7c15d5503b 323 SUPERFAMILY SSF51395 17 321 6.41E-88 T 22-04-2016 SII_RS00690 f97c6f8addbd93be7f7b6c7c15d5503b 323 Pfam PF01207 Dihydrouridine synthase (Dus) 20 321 7.3E-90 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 SII_RS00690 f97c6f8addbd93be7f7b6c7c15d5503b 323 PANTHER PTHR11082:SF25 1 322 6.3E-139 T 22-04-2016 SII_RS00690 f97c6f8addbd93be7f7b6c7c15d5503b 323 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 102 120 - T 22-04-2016 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 SII_RS00690 f97c6f8addbd93be7f7b6c7c15d5503b 323 PANTHER PTHR11082 1 322 6.3E-139 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 SII_RS00690 f97c6f8addbd93be7f7b6c7c15d5503b 323 Gene3D G3DSA:1.10.1200.80 259 322 8.7E-20 T 22-04-2016 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 SII_RS00690 f97c6f8addbd93be7f7b6c7c15d5503b 323 Gene3D G3DSA:3.20.20.70 14 253 7.3E-85 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SII_RS00690 f97c6f8addbd93be7f7b6c7c15d5503b 323 PIRSF PIRSF006621 7 323 1.6E-101 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 SII_RS00690 f97c6f8addbd93be7f7b6c7c15d5503b 323 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 10 322 1.5E-108 T 22-04-2016 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 SII_RS02615 85c20d355b7d7a5079cdc65fc788b6b8 1033 PANTHER PTHR32294:SF0 3 1033 0.0 T 22-04-2016 SII_RS02615 85c20d355b7d7a5079cdc65fc788b6b8 1033 PANTHER PTHR32294 3 1033 0.0 T 22-04-2016 SII_RS02615 85c20d355b7d7a5079cdc65fc788b6b8 1033 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 241 657 6.1E-155 T 22-04-2016 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SII_RS02615 85c20d355b7d7a5079cdc65fc788b6b8 1033 Gene3D G3DSA:3.20.20.140 9 88 3.6E-9 T 22-04-2016 SII_RS02615 85c20d355b7d7a5079cdc65fc788b6b8 1033 Gene3D G3DSA:2.40.50.140 874 957 1.5E-7 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SII_RS02615 85c20d355b7d7a5079cdc65fc788b6b8 1033 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 156 924 1.1E-210 T 22-04-2016 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SII_RS02615 85c20d355b7d7a5079cdc65fc788b6b8 1033 SMART SM00481 3 70 1.5E-9 T 22-04-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 SII_RS02615 85c20d355b7d7a5079cdc65fc788b6b8 1033 Pfam PF02811 PHP domain 7 109 3.7E-16 T 22-04-2016 IPR004013 PHP domain GO:0003824 SII_RS02615 85c20d355b7d7a5079cdc65fc788b6b8 1033 SUPERFAMILY SSF89550 150 173 1.44E-7 T 22-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 SII_RS02615 85c20d355b7d7a5079cdc65fc788b6b8 1033 SUPERFAMILY SSF89550 9 88 1.44E-7 T 22-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 SII_RS02615 85c20d355b7d7a5079cdc65fc788b6b8 1033 Pfam PF14579 Helix-hairpin-helix motif 729 810 2.1E-9 T 22-04-2016 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SII_RS05015 7438234606e1a4f6b09db392af30a566 603 PANTHER PTHR24221:SF157 8 599 2.8E-74 T 22-04-2016 SII_RS05015 7438234606e1a4f6b09db392af30a566 603 ProSitePatterns PS00211 ABC transporters family signature. 494 508 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SII_RS05015 7438234606e1a4f6b09db392af30a566 603 SMART SM00382 377 568 4.2E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain SII_RS05015 7438234606e1a4f6b09db392af30a566 603 Gene3D G3DSA:1.20.1560.10 28 331 7.4E-23 T 22-04-2016 SII_RS05015 7438234606e1a4f6b09db392af30a566 603 SUPERFAMILY SSF52540 350 590 5.79E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS05015 7438234606e1a4f6b09db392af30a566 603 PANTHER PTHR24221 8 599 2.8E-74 T 22-04-2016 SII_RS05015 7438234606e1a4f6b09db392af30a566 603 Gene3D G3DSA:3.40.50.300 350 593 3.4E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS05015 7438234606e1a4f6b09db392af30a566 603 Pfam PF00005 ABC transporter 368 521 1.7E-37 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SII_RS05015 7438234606e1a4f6b09db392af30a566 603 SUPERFAMILY SSF90123 23 324 4.58E-27 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SII_RS03735 63b7c115050e3f13a24de1c61d3e44fe 744 TIGRFAM TIGR00361 ComEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 113 726 2.5E-66 T 22-04-2016 IPR004797 Competence protein ComEC/Rec2 GO:0016021|GO:0030420 SII_RS03735 63b7c115050e3f13a24de1c61d3e44fe 744 SMART SM00849 495 697 4.1E-4 T 22-04-2016 IPR001279 Metallo-beta-lactamase SII_RS03735 63b7c115050e3f13a24de1c61d3e44fe 744 PANTHER PTHR30619 3 730 2.8E-131 T 22-04-2016 SII_RS03735 63b7c115050e3f13a24de1c61d3e44fe 744 Pfam PF03772 Competence protein 217 460 1.1E-33 T 22-04-2016 IPR004477 ComEC/Rec2-related protein SII_RS03735 63b7c115050e3f13a24de1c61d3e44fe 744 Gene3D G3DSA:3.60.15.10 486 724 2.6E-22 T 22-04-2016 IPR001279 Metallo-beta-lactamase SII_RS03735 63b7c115050e3f13a24de1c61d3e44fe 744 SUPERFAMILY SSF56281 487 729 6.77E-28 T 22-04-2016 IPR001279 Metallo-beta-lactamase SII_RS03735 63b7c115050e3f13a24de1c61d3e44fe 744 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 237 397 9.3E-14 T 22-04-2016 IPR004477 ComEC/Rec2-related protein SII_RS03735 63b7c115050e3f13a24de1c61d3e44fe 744 Pfam PF13567 Domain of unknown function (DUF4131) 31 175 4.9E-10 T 22-04-2016 IPR025405 Domain of unknown function DUF4131 SII_RS03735 63b7c115050e3f13a24de1c61d3e44fe 744 PANTHER PTHR30619:SF2 3 730 2.8E-131 T 22-04-2016 SII_RS05615 8e70b4173c6a3d6aa70b83911f66b593 320 Pfam PF13412 Winged helix-turn-helix DNA-binding 22 51 3.2E-5 T 22-04-2016 SII_RS05615 8e70b4173c6a3d6aa70b83911f66b593 320 Pfam PF04198 Putative sugar-binding domain 60 313 1.8E-73 T 22-04-2016 IPR007324 Sugar-binding domain, putative GO:0030246 SII_RS05615 8e70b4173c6a3d6aa70b83911f66b593 320 Gene3D G3DSA:3.40.50.1360 56 316 6.1E-76 T 22-04-2016 SII_RS05615 8e70b4173c6a3d6aa70b83911f66b593 320 Gene3D G3DSA:1.10.10.10 22 53 1.6E-5 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SII_RS05615 8e70b4173c6a3d6aa70b83911f66b593 320 PANTHER PTHR34294:SF2 1 318 3.1E-117 T 22-04-2016 SII_RS05615 8e70b4173c6a3d6aa70b83911f66b593 320 PANTHER PTHR34294 1 318 3.1E-117 T 22-04-2016 SII_RS05615 8e70b4173c6a3d6aa70b83911f66b593 320 SUPERFAMILY SSF100950 60 315 4.35E-68 T 22-04-2016 SII_RS04800 088c81a38d8e9344af9077bf0bf5f293 267 Pfam PF00753 Metallo-beta-lactamase superfamily 15 221 2.8E-20 T 22-04-2016 IPR001279 Metallo-beta-lactamase SII_RS04800 088c81a38d8e9344af9077bf0bf5f293 267 SUPERFAMILY SSF56281 12 245 9.36E-44 T 22-04-2016 IPR001279 Metallo-beta-lactamase SII_RS04800 088c81a38d8e9344af9077bf0bf5f293 267 SMART SM00849 16 221 7.3E-12 T 22-04-2016 IPR001279 Metallo-beta-lactamase SII_RS04800 088c81a38d8e9344af9077bf0bf5f293 267 PANTHER PTHR13754:SF15 1 265 1.1E-102 T 22-04-2016 SII_RS04800 088c81a38d8e9344af9077bf0bf5f293 267 Gene3D G3DSA:3.60.15.10 6 234 4.0E-38 T 22-04-2016 IPR001279 Metallo-beta-lactamase SII_RS04800 088c81a38d8e9344af9077bf0bf5f293 267 PANTHER PTHR13754 1 265 1.1E-102 T 22-04-2016 SII_RS00500 95728303992363ac68bfe7809cf74ccb 308 ProSitePatterns PS01272 Glucokinase regulatory protein family signature. 185 202 - T 22-04-2016 IPR005486 Glucokinase regulatory protein, conserved site KEGG: 00030+4.2.1.12|KEGG: 00520+4.2.1.126|UniPathway: UPA00342 SII_RS00500 95728303992363ac68bfe7809cf74ccb 308 Gene3D G3DSA:3.40.50.10490 5 248 1.8E-78 T 22-04-2016 SII_RS00500 95728303992363ac68bfe7809cf74ccb 308 TIGRFAM TIGR00274 TIGR00274: N-acetylmuramic acid 6-phosphate etherase 6 289 1.0E-112 T 22-04-2016 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00030+4.2.1.12|KEGG: 00520+4.2.1.126|UniPathway: UPA00342 SII_RS00500 95728303992363ac68bfe7809cf74ccb 308 PANTHER PTHR10088 1 296 1.2E-119 T 22-04-2016 SII_RS00500 95728303992363ac68bfe7809cf74ccb 308 Hamap MF_00068 N-acetylmuramic acid 6-phosphate etherase [murQ]. 2 295 39.448 T 22-04-2016 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00030+4.2.1.12|KEGG: 00520+4.2.1.126|UniPathway: UPA00342 SII_RS00500 95728303992363ac68bfe7809cf74ccb 308 SUPERFAMILY SSF53697 5 248 1.07E-66 T 22-04-2016 SII_RS00500 95728303992363ac68bfe7809cf74ccb 308 Pfam PF01380 SIS domain 128 207 3.3E-8 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 SII_RS06820 e49326a942f185ac7be17f773ae0dfa8 247 Pfam PF00005 ABC transporter 17 168 3.5E-35 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SII_RS06820 e49326a942f185ac7be17f773ae0dfa8 247 Gene3D G3DSA:3.40.50.300 1 239 8.5E-81 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS06820 e49326a942f185ac7be17f773ae0dfa8 247 PANTHER PTHR24220:SF327 3 239 2.3E-111 T 22-04-2016 SII_RS06820 e49326a942f185ac7be17f773ae0dfa8 247 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SII_RS06820 e49326a942f185ac7be17f773ae0dfa8 247 PANTHER PTHR24220 3 239 2.3E-111 T 22-04-2016 SII_RS06820 e49326a942f185ac7be17f773ae0dfa8 247 SMART SM00382 26 216 3.2E-17 T 22-04-2016 IPR003593 AAA+ ATPase domain SII_RS06820 e49326a942f185ac7be17f773ae0dfa8 247 SUPERFAMILY SSF52540 1 238 2.28E-74 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS06820 e49326a942f185ac7be17f773ae0dfa8 247 PIRSF PIRSF039085 1 244 1.2E-94 T 22-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 SII_RS03025 0c087f312eaf64542a507f89b8194926 176 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 11 171 6.9E-65 T 22-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 SII_RS03025 0c087f312eaf64542a507f89b8194926 176 Gene3D G3DSA:3.10.20.80 6 82 8.0E-34 T 22-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 SII_RS03025 0c087f312eaf64542a507f89b8194926 176 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 4 174 29.652 T 22-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 SII_RS03025 0c087f312eaf64542a507f89b8194926 176 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 87 171 5.4E-36 T 22-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 SII_RS03025 0c087f312eaf64542a507f89b8194926 176 ProSitePatterns PS00938 Initiation factor 3 signature. 62 75 - T 22-04-2016 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 SII_RS03025 0c087f312eaf64542a507f89b8194926 176 Gene3D G3DSA:3.30.110.10 83 175 2.0E-36 T 22-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 SII_RS03025 0c087f312eaf64542a507f89b8194926 176 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 11 80 4.6E-29 T 22-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 SII_RS03025 0c087f312eaf64542a507f89b8194926 176 SUPERFAMILY SSF55200 86 174 3.4E-32 T 22-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 SII_RS03025 0c087f312eaf64542a507f89b8194926 176 SUPERFAMILY SSF54364 9 82 2.75E-28 T 22-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 SII_RS03025 0c087f312eaf64542a507f89b8194926 176 PANTHER PTHR10938 4 172 2.4E-65 T 22-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 SII_RS08130 a3be2c3b2a00cd43eeb6aeb861b6be1b 318 SUPERFAMILY SSF53335 53 306 9.54E-40 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SII_RS08130 a3be2c3b2a00cd43eeb6aeb861b6be1b 318 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 5 308 34.464 T 22-04-2016 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 SII_RS08130 a3be2c3b2a00cd43eeb6aeb861b6be1b 318 PANTHER PTHR18895 18 313 1.2E-90 T 22-04-2016 SII_RS08130 a3be2c3b2a00cd43eeb6aeb861b6be1b 318 TIGRFAM TIGR00406 prmA: ribosomal protein L11 methyltransferase 5 301 2.6E-70 T 22-04-2016 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 SII_RS08130 a3be2c3b2a00cd43eeb6aeb861b6be1b 318 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 4 308 2.9E-110 T 22-04-2016 SII_RS08130 a3be2c3b2a00cd43eeb6aeb861b6be1b 318 Gene3D G3DSA:3.40.50.150 111 302 6.3E-45 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SII_RS08130 a3be2c3b2a00cd43eeb6aeb861b6be1b 318 PANTHER PTHR18895:SF3 18 313 1.2E-90 T 22-04-2016 SII_RS08130 a3be2c3b2a00cd43eeb6aeb861b6be1b 318 PIRSF PIRSF000401 3 310 7.8E-108 T 22-04-2016 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 SII_RS07450 9974a9d96a31e0f3eabaf254ede61b72 671 SUPERFAMILY SSF50249 1 162 1.01E-31 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SII_RS07450 9974a9d96a31e0f3eabaf254ede61b72 671 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 24 642 2.0E-247 T 22-04-2016 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 SII_RS07450 9974a9d96a31e0f3eabaf254ede61b72 671 Gene3D G3DSA:2.40.50.140 44 122 7.3E-17 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SII_RS07450 9974a9d96a31e0f3eabaf254ede61b72 671 SMART SM00487 249 437 3.9E-36 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain SII_RS07450 9974a9d96a31e0f3eabaf254ede61b72 671 PANTHER PTHR24031 222 266 7.5E-121 T 22-04-2016 SII_RS07450 9974a9d96a31e0f3eabaf254ede61b72 671 PANTHER PTHR24031 108 186 7.5E-121 T 22-04-2016 SII_RS07450 9974a9d96a31e0f3eabaf254ede61b72 671 PANTHER PTHR24031 283 580 7.5E-121 T 22-04-2016 SII_RS07450 9974a9d96a31e0f3eabaf254ede61b72 671 PANTHER PTHR24031 603 646 7.5E-121 T 22-04-2016 SII_RS07450 9974a9d96a31e0f3eabaf254ede61b72 671 SMART SM00490 315 395 0.17 T 22-04-2016 IPR001650 Helicase, C-terminal SII_RS07450 9974a9d96a31e0f3eabaf254ede61b72 671 SMART SM00490 482 567 1.2E-23 T 22-04-2016 IPR001650 Helicase, C-terminal SII_RS07450 9974a9d96a31e0f3eabaf254ede61b72 671 SUPERFAMILY SSF52540 371 580 1.05E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS07450 9974a9d96a31e0f3eabaf254ede61b72 671 Gene3D G3DSA:3.40.50.300 433 615 1.5E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS07450 9974a9d96a31e0f3eabaf254ede61b72 671 Pfam PF17191 RecG wedge domain 11 158 2.4E-17 T 22-04-2016 IPR033454 RecG, wedge domain SII_RS07450 9974a9d96a31e0f3eabaf254ede61b72 671 PANTHER PTHR24031:SF249 222 266 7.5E-121 T 22-04-2016 SII_RS07450 9974a9d96a31e0f3eabaf254ede61b72 671 PANTHER PTHR24031:SF249 108 186 7.5E-121 T 22-04-2016 SII_RS07450 9974a9d96a31e0f3eabaf254ede61b72 671 PANTHER PTHR24031:SF249 283 580 7.5E-121 T 22-04-2016 SII_RS07450 9974a9d96a31e0f3eabaf254ede61b72 671 PANTHER PTHR24031:SF249 603 646 7.5E-121 T 22-04-2016 SII_RS07450 9974a9d96a31e0f3eabaf254ede61b72 671 Pfam PF00271 Helicase conserved C-terminal domain 447 566 2.8E-21 T 22-04-2016 IPR001650 Helicase, C-terminal SII_RS07450 9974a9d96a31e0f3eabaf254ede61b72 671 Gene3D G3DSA:1.10.150.20 6 33 7.4E-6 T 22-04-2016 SII_RS07450 9974a9d96a31e0f3eabaf254ede61b72 671 Pfam PF00270 DEAD/DEAH box helicase 254 411 2.8E-18 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 SII_RS07450 9974a9d96a31e0f3eabaf254ede61b72 671 SUPERFAMILY SSF52540 169 431 3.79E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS07450 9974a9d96a31e0f3eabaf254ede61b72 671 Gene3D G3DSA:3.40.50.300 240 432 1.7E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS02125 8c52e3f0e0c89e8035120f4bf3692e0a 514 PRINTS PR00315 GTP-binding elongation factor signature 82 92 4.9E-11 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SII_RS02125 8c52e3f0e0c89e8035120f4bf3692e0a 514 PRINTS PR00315 GTP-binding elongation factor signature 98 109 4.9E-11 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SII_RS02125 8c52e3f0e0c89e8035120f4bf3692e0a 514 PRINTS PR00315 GTP-binding elongation factor signature 134 143 4.9E-11 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SII_RS02125 8c52e3f0e0c89e8035120f4bf3692e0a 514 PRINTS PR00315 GTP-binding elongation factor signature 62 70 4.9E-11 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SII_RS02125 8c52e3f0e0c89e8035120f4bf3692e0a 514 PRINTS PR00315 GTP-binding elongation factor signature 12 25 4.9E-11 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SII_RS02125 8c52e3f0e0c89e8035120f4bf3692e0a 514 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 1 514 49.841 T 22-04-2016 IPR004548 Peptide chain release factor 3 GO:0005525|GO:0005737|GO:0006415|GO:0016149 SII_RS02125 8c52e3f0e0c89e8035120f4bf3692e0a 514 Pfam PF00009 Elongation factor Tu GTP binding domain 9 265 2.6E-50 T 22-04-2016 SII_RS02125 8c52e3f0e0c89e8035120f4bf3692e0a 514 Gene3D G3DSA:3.30.70.870 384 454 1.5E-14 T 22-04-2016 SII_RS02125 8c52e3f0e0c89e8035120f4bf3692e0a 514 SUPERFAMILY SSF52540 6 265 9.41E-86 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS02125 8c52e3f0e0c89e8035120f4bf3692e0a 514 Pfam PF03144 Elongation factor Tu domain 2 303 369 1.3E-12 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 SII_RS02125 8c52e3f0e0c89e8035120f4bf3692e0a 514 Gene3D G3DSA:2.40.30.10 284 383 4.9E-25 T 22-04-2016 SII_RS02125 8c52e3f0e0c89e8035120f4bf3692e0a 514 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 12 158 5.9E-21 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 SII_RS02125 8c52e3f0e0c89e8035120f4bf3692e0a 514 PANTHER PTHR23115:SF69 1 181 9.4E-230 T 22-04-2016 SII_RS02125 8c52e3f0e0c89e8035120f4bf3692e0a 514 PANTHER PTHR23115:SF69 239 456 9.4E-230 T 22-04-2016 SII_RS02125 8c52e3f0e0c89e8035120f4bf3692e0a 514 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 55 70 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site SII_RS02125 8c52e3f0e0c89e8035120f4bf3692e0a 514 SUPERFAMILY SSF54980 383 454 1.83E-16 T 22-04-2016 IPR009022 Elongation factor G, III-V domain SII_RS02125 8c52e3f0e0c89e8035120f4bf3692e0a 514 PANTHER PTHR23115 1 181 9.4E-230 T 22-04-2016 SII_RS02125 8c52e3f0e0c89e8035120f4bf3692e0a 514 PANTHER PTHR23115 239 456 9.4E-230 T 22-04-2016 SII_RS02125 8c52e3f0e0c89e8035120f4bf3692e0a 514 Gene3D G3DSA:3.40.50.300 3 270 4.5E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS02125 8c52e3f0e0c89e8035120f4bf3692e0a 514 TIGRFAM TIGR00503 prfC: peptide chain release factor 3 4 512 5.0E-198 T 22-04-2016 IPR004548 Peptide chain release factor 3 GO:0005525|GO:0005737|GO:0006415|GO:0016149 SII_RS02125 8c52e3f0e0c89e8035120f4bf3692e0a 514 PRINTS PR01037 Tetracycline resistance protein TetO/TetQ/TetM family signature 120 143 1.1E-8 T 22-04-2016 SII_RS02125 8c52e3f0e0c89e8035120f4bf3692e0a 514 PRINTS PR01037 Tetracycline resistance protein TetO/TetQ/TetM family signature 239 261 1.1E-8 T 22-04-2016 SII_RS02125 8c52e3f0e0c89e8035120f4bf3692e0a 514 Pfam PF16658 Class II release factor RF3, C-terminal domain 377 501 2.1E-43 T 22-04-2016 IPR032090 Peptide chain release factor 3, C-terminal SII_RS02125 8c52e3f0e0c89e8035120f4bf3692e0a 514 SUPERFAMILY SSF50447 249 379 1.01E-27 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain SII_RS08270 d0c49708ff21cddf0fc080bfa7cbfadb 619 SUPERFAMILY SSF55826 256 422 3.01E-33 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 SII_RS08270 d0c49708ff21cddf0fc080bfa7cbfadb 619 Pfam PF04073 Aminoacyl-tRNA editing domain 295 414 3.9E-27 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 SII_RS08270 d0c49708ff21cddf0fc080bfa7cbfadb 619 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 94 493 1.2E-55 T 22-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SII_RS08270 d0c49708ff21cddf0fc080bfa7cbfadb 619 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 616 38.36 T 22-04-2016 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 SII_RS08270 d0c49708ff21cddf0fc080bfa7cbfadb 619 Gene3D G3DSA:3.40.50.800 514 617 2.9E-26 T 22-04-2016 IPR004154 Anticodon-binding SII_RS08270 d0c49708ff21cddf0fc080bfa7cbfadb 619 PANTHER PTHR11451:SF3 433 617 1.8E-129 T 22-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 SII_RS08270 d0c49708ff21cddf0fc080bfa7cbfadb 619 PANTHER PTHR11451:SF3 255 282 1.8E-129 T 22-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 SII_RS08270 d0c49708ff21cddf0fc080bfa7cbfadb 619 PANTHER PTHR11451:SF3 4 216 1.8E-129 T 22-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 SII_RS08270 d0c49708ff21cddf0fc080bfa7cbfadb 619 Gene3D G3DSA:3.90.960.10 292 422 8.8E-34 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 SII_RS08270 d0c49708ff21cddf0fc080bfa7cbfadb 619 Pfam PF03129 Anticodon binding domain 522 611 6.5E-17 T 22-04-2016 IPR004154 Anticodon-binding SII_RS08270 d0c49708ff21cddf0fc080bfa7cbfadb 619 Gene3D G3DSA:3.30.930.10 1 228 7.3E-87 T 22-04-2016 SII_RS08270 d0c49708ff21cddf0fc080bfa7cbfadb 619 Gene3D G3DSA:3.30.930.10 441 494 7.3E-87 T 22-04-2016 SII_RS08270 d0c49708ff21cddf0fc080bfa7cbfadb 619 SUPERFAMILY SSF52954 511 612 8.18E-27 T 22-04-2016 IPR004154 Anticodon-binding SII_RS08270 d0c49708ff21cddf0fc080bfa7cbfadb 619 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 254 611 1.2E-95 T 22-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 SII_RS08270 d0c49708ff21cddf0fc080bfa7cbfadb 619 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 214 1.7E-97 T 22-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 SII_RS08270 d0c49708ff21cddf0fc080bfa7cbfadb 619 PANTHER PTHR11451 433 617 1.8E-129 T 22-04-2016 SII_RS08270 d0c49708ff21cddf0fc080bfa7cbfadb 619 PANTHER PTHR11451 255 282 1.8E-129 T 22-04-2016 SII_RS08270 d0c49708ff21cddf0fc080bfa7cbfadb 619 PANTHER PTHR11451 4 216 1.8E-129 T 22-04-2016 SII_RS08270 d0c49708ff21cddf0fc080bfa7cbfadb 619 SUPERFAMILY SSF55681 9 229 5.35E-83 T 22-04-2016 SII_RS08270 d0c49708ff21cddf0fc080bfa7cbfadb 619 SUPERFAMILY SSF55681 441 524 5.35E-83 T 22-04-2016 SII_RS08270 d0c49708ff21cddf0fc080bfa7cbfadb 619 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 7.3E-15 T 22-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 SII_RS08270 d0c49708ff21cddf0fc080bfa7cbfadb 619 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 7.3E-15 T 22-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 SII_RS08270 d0c49708ff21cddf0fc080bfa7cbfadb 619 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 7.3E-15 T 22-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 SII_RS08270 d0c49708ff21cddf0fc080bfa7cbfadb 619 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 7.3E-15 T 22-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 SII_RS02830 a98255257c85a47d144a9ae855095614 183 Gene3D G3DSA:3.40.50.1950 2 179 6.0E-62 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 SII_RS02830 a98255257c85a47d144a9ae855095614 183 PANTHER PTHR14359:SF20 1 181 7.5E-68 T 22-04-2016 SII_RS02830 a98255257c85a47d144a9ae855095614 183 PANTHER PTHR14359 1 181 7.5E-68 T 22-04-2016 SII_RS02830 a98255257c85a47d144a9ae855095614 183 Pfam PF02441 Flavoprotein 2 132 7.3E-36 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 SII_RS02830 a98255257c85a47d144a9ae855095614 183 TIGRFAM TIGR02113 coaC_strep: phosphopantothenoylcysteine decarboxylase 2 177 2.3E-86 T 22-04-2016 IPR011847 Phosphopantothenoylcysteine decarboxylase KEGG: 00770+4.1.1.36|UniPathway: UPA00241 SII_RS02830 a98255257c85a47d144a9ae855095614 183 SUPERFAMILY SSF52507 1 179 2.49E-57 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 SII_RS00205 bc61083776d3bb65357e664a75708817 395 Gene3D G3DSA:3.40.640.10 44 255 1.0E-68 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SII_RS00205 bc61083776d3bb65357e664a75708817 395 SUPERFAMILY SSF53383 6 389 3.42E-106 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SII_RS00205 bc61083776d3bb65357e664a75708817 395 PANTHER PTHR11751:SF417 14 392 2.4E-161 T 22-04-2016 SII_RS00205 bc61083776d3bb65357e664a75708817 395 Gene3D G3DSA:3.90.1150.10 256 388 1.3E-39 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SII_RS00205 bc61083776d3bb65357e664a75708817 395 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 234 247 - T 22-04-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Reactome: REACT_13 SII_RS00205 bc61083776d3bb65357e664a75708817 395 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 93 113 5.3E-14 T 22-04-2016 SII_RS00205 bc61083776d3bb65357e664a75708817 395 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 115 136 5.3E-14 T 22-04-2016 SII_RS00205 bc61083776d3bb65357e664a75708817 395 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 164 188 5.3E-14 T 22-04-2016 SII_RS00205 bc61083776d3bb65357e664a75708817 395 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 200 223 5.3E-14 T 22-04-2016 SII_RS00205 bc61083776d3bb65357e664a75708817 395 Pfam PF00155 Aminotransferase class I and II 32 382 2.9E-60 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 SII_RS00205 bc61083776d3bb65357e664a75708817 395 PANTHER PTHR11751 14 392 2.4E-161 T 22-04-2016 SII_RS00270 6b4e5a293b64f801d60373c5bf36da32 420 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 103 294 5.4E-80 T 22-04-2016 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 SII_RS00270 6b4e5a293b64f801d60373c5bf36da32 420 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 329 416 2.0E-18 T 22-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 SII_RS00270 6b4e5a293b64f801d60373c5bf36da32 420 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 101 1.1E-29 T 22-04-2016 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 SII_RS00270 6b4e5a293b64f801d60373c5bf36da32 420 SMART SM01209 102 294 2.5E-131 T 22-04-2016 SII_RS00270 6b4e5a293b64f801d60373c5bf36da32 420 Gene3D G3DSA:3.90.600.10 328 418 5.1E-19 T 22-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 SII_RS00270 6b4e5a293b64f801d60373c5bf36da32 420 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 419 3.0E-143 T 22-04-2016 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 SII_RS00270 6b4e5a293b64f801d60373c5bf36da32 420 Gene3D G3DSA:3.30.470.20 190 321 7.9E-57 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 SII_RS00270 6b4e5a293b64f801d60373c5bf36da32 420 PANTHER PTHR10520 1 420 2.4E-219 T 22-04-2016 SII_RS00270 6b4e5a293b64f801d60373c5bf36da32 420 SUPERFAMILY SSF56059 103 321 3.71E-66 T 22-04-2016 SII_RS00270 6b4e5a293b64f801d60373c5bf36da32 420 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 419 41.13 T 22-04-2016 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 SII_RS00270 6b4e5a293b64f801d60373c5bf36da32 420 Gene3D G3DSA:3.40.50.20 2 94 6.3E-32 T 22-04-2016 IPR016185 Pre-ATP-grasp domain SII_RS00270 6b4e5a293b64f801d60373c5bf36da32 420 Gene3D G3DSA:3.30.1490.20 120 189 2.5E-31 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 SII_RS00270 6b4e5a293b64f801d60373c5bf36da32 420 SUPERFAMILY SSF52440 1 101 5.47E-29 T 22-04-2016 IPR016185 Pre-ATP-grasp domain SII_RS00270 6b4e5a293b64f801d60373c5bf36da32 420 SUPERFAMILY SSF51246 326 419 7.22E-19 T 22-04-2016 IPR011054 Rudiment single hybrid motif SII_RS00270 6b4e5a293b64f801d60373c5bf36da32 420 SMART SM01210 327 419 4.6E-25 T 22-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 SII_RS00270 6b4e5a293b64f801d60373c5bf36da32 420 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 288 295 - T 22-04-2016 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 SII_RS09255 5ad31e05b70effdbaa371773ec74b52e 248 Gene3D G3DSA:1.10.10.10 1 56 5.1E-10 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SII_RS09255 5ad31e05b70effdbaa371773ec74b52e 248 PANTHER PTHR30363:SF13 1 243 3.3E-56 T 22-04-2016 SII_RS09255 5ad31e05b70effdbaa371773ec74b52e 248 SUPERFAMILY SSF100950 75 231 1.26E-18 T 22-04-2016 SII_RS09255 5ad31e05b70effdbaa371773ec74b52e 248 Gene3D G3DSA:3.40.50.1360 76 212 8.5E-6 T 22-04-2016 SII_RS09255 5ad31e05b70effdbaa371773ec74b52e 248 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 22-04-2016 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 SII_RS09255 5ad31e05b70effdbaa371773ec74b52e 248 Pfam PF00455 DeoR C terminal sensor domain 76 230 9.9E-34 T 22-04-2016 IPR014036 DeoR C-terminal sensor domain SII_RS09255 5ad31e05b70effdbaa371773ec74b52e 248 SUPERFAMILY SSF46785 4 71 1.47E-10 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SII_RS09255 5ad31e05b70effdbaa371773ec74b52e 248 SMART SM01134 73 231 6.6E-43 T 22-04-2016 SII_RS09255 5ad31e05b70effdbaa371773ec74b52e 248 PANTHER PTHR30363 1 243 3.3E-56 T 22-04-2016 SII_RS09255 5ad31e05b70effdbaa371773ec74b52e 248 SMART SM00420 6 58 1.8E-12 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 SII_RS09255 5ad31e05b70effdbaa371773ec74b52e 248 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 1.4E-6 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 SII_RS09255 5ad31e05b70effdbaa371773ec74b52e 248 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 1.4E-6 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 SII_RS09255 5ad31e05b70effdbaa371773ec74b52e 248 Pfam PF08220 DeoR-like helix-turn-helix domain 6 56 8.8E-16 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 SII_RS00335 75644c00e631267c820c82c675da5906 238 SUPERFAMILY SSF64288 56 232 5.18E-24 T 22-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain SII_RS00335 75644c00e631267c820c82c675da5906 238 Pfam PF00392 Bacterial regulatory proteins, gntR family 6 68 7.9E-16 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SII_RS00335 75644c00e631267c820c82c675da5906 238 Pfam PF07702 UTRA domain 93 228 2.5E-16 T 22-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 SII_RS00335 75644c00e631267c820c82c675da5906 238 Gene3D G3DSA:3.40.1410.10 63 235 6.4E-27 T 22-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain SII_RS00335 75644c00e631267c820c82c675da5906 238 PANTHER PTHR11751:SF354 112 135 7.6E-34 T 22-04-2016 SII_RS00335 75644c00e631267c820c82c675da5906 238 PANTHER PTHR11751:SF354 1 70 7.6E-34 T 22-04-2016 SII_RS00335 75644c00e631267c820c82c675da5906 238 SMART SM00345 9 68 6.5E-14 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SII_RS00335 75644c00e631267c820c82c675da5906 238 SMART SM00866 87 228 1.2E-10 T 22-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 SII_RS00335 75644c00e631267c820c82c675da5906 238 Gene3D G3DSA:1.10.10.10 3 62 2.5E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SII_RS00335 75644c00e631267c820c82c675da5906 238 PANTHER PTHR11751 112 135 7.6E-34 T 22-04-2016 SII_RS00335 75644c00e631267c820c82c675da5906 238 PANTHER PTHR11751 1 70 7.6E-34 T 22-04-2016 SII_RS00335 75644c00e631267c820c82c675da5906 238 SUPERFAMILY SSF46785 3 72 1.4E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SII_RS09280 2f783b76a8ba61ecd9b1a8ca5b2fa4ae 414 Pfam PF03062 MBOAT, membrane-bound O-acyltransferase family 66 364 2.9E-9 T 22-04-2016 IPR004299 Membrane bound O-acyl transferase, MBOAT SII_RS09280 2f783b76a8ba61ecd9b1a8ca5b2fa4ae 414 PANTHER PTHR13285 21 408 1.9E-57 T 22-04-2016 SII_RS09280 2f783b76a8ba61ecd9b1a8ca5b2fa4ae 414 PIRSF PIRSF016636 14 407 4.3E-77 T 22-04-2016 IPR024194 Alginate O-acetyltransferase AlgI/D-alanyl transfer protein DltB SII_RS09280 2f783b76a8ba61ecd9b1a8ca5b2fa4ae 414 TIGRFAM TIGR04091 LTA_dltB: D-alanyl-lipoteichoic acid biosynthesis protein DltB 12 407 5.5E-164 T 22-04-2016 IPR024024 D-alanyl transfer protein DltB UniPathway: UPA00556 SII_RS09280 2f783b76a8ba61ecd9b1a8ca5b2fa4ae 414 PIRSF PIRSF500216 10 412 1.1E-177 T 22-04-2016 IPR024024 D-alanyl transfer protein DltB UniPathway: UPA00556 SII_RS05535 56554b62f59aaf79e26eb7dccb74d155 877 PANTHER PTHR11607:SF26 621 738 2.8E-283 T 22-04-2016 SII_RS05535 56554b62f59aaf79e26eb7dccb74d155 877 PANTHER PTHR11607:SF26 443 594 2.8E-283 T 22-04-2016 SII_RS05535 56554b62f59aaf79e26eb7dccb74d155 877 PANTHER PTHR11607:SF26 2 420 2.8E-283 T 22-04-2016 SII_RS05535 56554b62f59aaf79e26eb7dccb74d155 877 SUPERFAMILY SSF88688 299 388 7.19E-12 T 22-04-2016 IPR028995 Glycoside hydrolase families 57/38, central domain SII_RS05535 56554b62f59aaf79e26eb7dccb74d155 877 SMART SM00872 297 367 1.1E-13 T 22-04-2016 IPR015341 Glycoside hydrolase family 38, central domain GO:0004553|GO:0008270 SII_RS05535 56554b62f59aaf79e26eb7dccb74d155 877 SUPERFAMILY SSF88713 3 272 2.15E-62 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 SII_RS05535 56554b62f59aaf79e26eb7dccb74d155 877 Pfam PF01074 Glycosyl hydrolases family 38 N-terminal domain 5 271 2.3E-33 T 22-04-2016 IPR000602 Glycoside hydrolase family 38, N-terminal domain GO:0004559|GO:0005975 SII_RS05535 56554b62f59aaf79e26eb7dccb74d155 877 Pfam PF09261 Alpha mannosidase middle domain 301 366 2.3E-6 T 22-04-2016 IPR015341 Glycoside hydrolase family 38, central domain GO:0004553|GO:0008270 SII_RS05535 56554b62f59aaf79e26eb7dccb74d155 877 SUPERFAMILY SSF74650 628 873 3.14E-55 T 22-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 SII_RS05535 56554b62f59aaf79e26eb7dccb74d155 877 SUPERFAMILY SSF74650 390 593 3.14E-55 T 22-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 SII_RS05535 56554b62f59aaf79e26eb7dccb74d155 877 Gene3D G3DSA:3.20.110.10 3 288 2.6E-49 T 22-04-2016 IPR027291 Glycoside hydrolase 38/57, N-terminal domain SII_RS05535 56554b62f59aaf79e26eb7dccb74d155 877 PANTHER PTHR11607 621 738 2.8E-283 T 22-04-2016 SII_RS05535 56554b62f59aaf79e26eb7dccb74d155 877 PANTHER PTHR11607 443 594 2.8E-283 T 22-04-2016 SII_RS05535 56554b62f59aaf79e26eb7dccb74d155 877 PANTHER PTHR11607 2 420 2.8E-283 T 22-04-2016 SII_RS05535 56554b62f59aaf79e26eb7dccb74d155 877 Gene3D G3DSA:1.20.1270.50 300 388 2.2E-8 T 22-04-2016 IPR015341 Glycoside hydrolase family 38, central domain GO:0004553|GO:0008270 SII_RS02070 1d857b478a819482dbc9463caaf22012 153 Pfam PF01475 Ferric uptake regulator family 24 143 7.0E-36 T 22-04-2016 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 SII_RS02070 1d857b478a819482dbc9463caaf22012 153 PANTHER PTHR33202:SF7 6 151 3.5E-41 T 22-04-2016 SII_RS02070 1d857b478a819482dbc9463caaf22012 153 PANTHER PTHR33202 6 151 3.5E-41 T 22-04-2016 SII_RS02070 1d857b478a819482dbc9463caaf22012 153 Gene3D G3DSA:1.10.10.10 16 93 2.5E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SII_RS02070 1d857b478a819482dbc9463caaf22012 153 SUPERFAMILY SSF46785 16 148 2.37E-37 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SII_RS05650 5c922750fedf6b8834c354f15f27f810 654 SUPERFAMILY SSF81271 2 61 6.21E-16 T 22-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 SII_RS05650 5c922750fedf6b8834c354f15f27f810 654 Gene3D G3DSA:3.40.50.800 537 641 1.3E-35 T 22-04-2016 IPR004154 Anticodon-binding SII_RS05650 5c922750fedf6b8834c354f15f27f810 654 PANTHER PTHR11451:SF5 1 642 1.1E-302 T 22-04-2016 SII_RS05650 5c922750fedf6b8834c354f15f27f810 654 SUPERFAMILY SSF55186 63 240 1.44E-63 T 22-04-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 SII_RS05650 5c922750fedf6b8834c354f15f27f810 654 Gene3D G3DSA:3.30.54.20 131 186 1.4E-22 T 22-04-2016 SII_RS05650 5c922750fedf6b8834c354f15f27f810 654 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 169 218 1.5E-15 T 22-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 SII_RS05650 5c922750fedf6b8834c354f15f27f810 654 SUPERFAMILY SSF52954 533 637 5.59E-33 T 22-04-2016 IPR004154 Anticodon-binding SII_RS05650 5c922750fedf6b8834c354f15f27f810 654 Gene3D G3DSA:3.10.20.30 1 64 2.7E-24 T 22-04-2016 IPR012675 Beta-grasp domain SII_RS05650 5c922750fedf6b8834c354f15f27f810 654 Pfam PF02824 TGS domain 2 61 4.7E-10 T 22-04-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 SII_RS05650 5c922750fedf6b8834c354f15f27f810 654 Gene3D G3DSA:3.30.980.10 66 130 4.4E-37 T 22-04-2016 SII_RS05650 5c922750fedf6b8834c354f15f27f810 654 Gene3D G3DSA:3.30.980.10 187 222 4.4E-37 T 22-04-2016 SII_RS05650 5c922750fedf6b8834c354f15f27f810 654 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 72 638 3.5E-226 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 SII_RS05650 5c922750fedf6b8834c354f15f27f810 654 PANTHER PTHR11451 1 642 1.1E-302 T 22-04-2016 SII_RS05650 5c922750fedf6b8834c354f15f27f810 654 SUPERFAMILY SSF55681 242 532 2.9E-94 T 22-04-2016 SII_RS05650 5c922750fedf6b8834c354f15f27f810 654 Pfam PF03129 Anticodon binding domain 547 635 8.1E-24 T 22-04-2016 IPR004154 Anticodon-binding SII_RS05650 5c922750fedf6b8834c354f15f27f810 654 Gene3D G3DSA:3.30.930.10 241 536 1.2E-102 T 22-04-2016 SII_RS05650 5c922750fedf6b8834c354f15f27f810 654 PRINTS PR01047 Threonyl-tRNA synthetase signature 513 526 5.3E-46 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 SII_RS05650 5c922750fedf6b8834c354f15f27f810 654 PRINTS PR01047 Threonyl-tRNA synthetase signature 540 552 5.3E-46 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 SII_RS05650 5c922750fedf6b8834c354f15f27f810 654 PRINTS PR01047 Threonyl-tRNA synthetase signature 364 387 5.3E-46 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 SII_RS05650 5c922750fedf6b8834c354f15f27f810 654 PRINTS PR01047 Threonyl-tRNA synthetase signature 470 498 5.3E-46 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 SII_RS05650 5c922750fedf6b8834c354f15f27f810 654 PRINTS PR01047 Threonyl-tRNA synthetase signature 331 359 5.3E-46 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 SII_RS05650 5c922750fedf6b8834c354f15f27f810 654 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 326 535 2.9E-32 T 22-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SII_RS05650 5c922750fedf6b8834c354f15f27f810 654 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 66 641 34.197 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 SII_RS05650 5c922750fedf6b8834c354f15f27f810 654 SMART SM00863 169 218 2.3E-23 T 22-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 SII_RS07955 0984727f369707c47e06c83a66bd3bb5 134 SMART SM00535 2 131 0.0056 T 22-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 SII_RS07955 0984727f369707c47e06c83a66bd3bb5 134 Pfam PF00636 Ribonuclease III domain 12 109 1.8E-13 T 22-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 SII_RS07955 0984727f369707c47e06c83a66bd3bb5 134 PIRSF PIRSF005520 1 133 2.6E-51 T 22-04-2016 IPR008226 Mini-ribonuclease 3 family SII_RS07955 0984727f369707c47e06c83a66bd3bb5 134 SUPERFAMILY SSF69065 3 127 1.62E-44 T 22-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 SII_RS07955 0984727f369707c47e06c83a66bd3bb5 134 PANTHER PTHR34276 3 123 2.5E-54 T 22-04-2016 SII_RS07955 0984727f369707c47e06c83a66bd3bb5 134 Gene3D G3DSA:1.10.1520.10 3 130 1.2E-51 T 22-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 SII_RS07955 0984727f369707c47e06c83a66bd3bb5 134 Hamap MF_01468 Mini-ribonuclease 3 [mrnC]. 1 127 28.909 T 22-04-2016 IPR008226 Mini-ribonuclease 3 family SII_RS01010 4d80c3959f05b29ccb484c34accb285d 693 Pfam PF00009 Elongation factor Tu GTP binding domain 9 280 6.6E-71 T 22-04-2016 SII_RS01010 4d80c3959f05b29ccb484c34accb285d 693 Pfam PF00679 Elongation factor G C-terminus 599 684 5.4E-30 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain SII_RS01010 4d80c3959f05b29ccb484c34accb285d 693 SUPERFAMILY SSF54980 400 478 6.12E-25 T 22-04-2016 IPR009022 Elongation factor G, III-V domain SII_RS01010 4d80c3959f05b29ccb484c34accb285d 693 SUPERFAMILY SSF54980 601 688 1.01E-29 T 22-04-2016 IPR009022 Elongation factor G, III-V domain SII_RS01010 4d80c3959f05b29ccb484c34accb285d 693 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.3E-16 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SII_RS01010 4d80c3959f05b29ccb484c34accb285d 693 PRINTS PR00315 GTP-binding elongation factor signature 94 105 1.3E-16 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SII_RS01010 4d80c3959f05b29ccb484c34accb285d 693 PRINTS PR00315 GTP-binding elongation factor signature 130 139 1.3E-16 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SII_RS01010 4d80c3959f05b29ccb484c34accb285d 693 PRINTS PR00315 GTP-binding elongation factor signature 12 25 1.3E-16 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SII_RS01010 4d80c3959f05b29ccb484c34accb285d 693 PRINTS PR00315 GTP-binding elongation factor signature 78 88 1.3E-16 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SII_RS01010 4d80c3959f05b29ccb484c34accb285d 693 SUPERFAMILY SSF52540 6 280 1.15E-111 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS01010 4d80c3959f05b29ccb484c34accb285d 693 PANTHER PTHR23115:SF66 1 177 0.0 T 22-04-2016 SII_RS01010 4d80c3959f05b29ccb484c34accb285d 693 PANTHER PTHR23115:SF66 301 689 0.0 T 22-04-2016 SII_RS01010 4d80c3959f05b29ccb484c34accb285d 693 PANTHER PTHR23115:SF66 253 281 0.0 T 22-04-2016 SII_RS01010 4d80c3959f05b29ccb484c34accb285d 693 SUPERFAMILY SSF50447 263 400 1.69E-34 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain SII_RS01010 4d80c3959f05b29ccb484c34accb285d 693 PANTHER PTHR23115 1 177 0.0 T 22-04-2016 SII_RS01010 4d80c3959f05b29ccb484c34accb285d 693 PANTHER PTHR23115 301 689 0.0 T 22-04-2016 SII_RS01010 4d80c3959f05b29ccb484c34accb285d 693 PANTHER PTHR23115 253 281 0.0 T 22-04-2016 SII_RS01010 4d80c3959f05b29ccb484c34accb285d 693 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 180 7.1E-43 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 SII_RS01010 4d80c3959f05b29ccb484c34accb285d 693 SMART SM00889 478 596 7.1E-71 T 22-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 SII_RS01010 4d80c3959f05b29ccb484c34accb285d 693 Gene3D G3DSA:2.40.30.10 303 403 1.5E-37 T 22-04-2016 SII_RS01010 4d80c3959f05b29ccb484c34accb285d 693 Gene3D G3DSA:3.30.70.240 597 683 4.3E-33 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain SII_RS01010 4d80c3959f05b29ccb484c34accb285d 693 Gene3D G3DSA:3.30.70.870 404 478 1.1E-37 T 22-04-2016 SII_RS01010 4d80c3959f05b29ccb484c34accb285d 693 Pfam PF03144 Elongation factor Tu domain 2 322 389 2.8E-14 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 SII_RS01010 4d80c3959f05b29ccb484c34accb285d 693 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site SII_RS01010 4d80c3959f05b29ccb484c34accb285d 693 Gene3D G3DSA:3.40.50.300 7 285 3.7E-109 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS01010 4d80c3959f05b29ccb484c34accb285d 693 Hamap MF_00054_B Elongation factor G [fusA]. 6 689 110.126 T 22-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 SII_RS01010 4d80c3959f05b29ccb484c34accb285d 693 SMART SM00838 598 685 4.3E-51 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain SII_RS01010 4d80c3959f05b29ccb484c34accb285d 693 TIGRFAM TIGR00484 EF-G: translation elongation factor G 1 690 0.0 T 22-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 SII_RS01010 4d80c3959f05b29ccb484c34accb285d 693 SUPERFAMILY SSF54211 477 597 3.03E-43 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SII_RS01010 4d80c3959f05b29ccb484c34accb285d 693 Pfam PF14492 Elongation Factor G, domain II 402 475 1.1E-33 T 22-04-2016 IPR009022 Elongation factor G, III-V domain SII_RS01010 4d80c3959f05b29ccb484c34accb285d 693 Gene3D G3DSA:3.30.230.10 482 596 1.6E-48 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SII_RS01010 4d80c3959f05b29ccb484c34accb285d 693 Pfam PF03764 Elongation factor G, domain IV 477 596 5.0E-46 T 22-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 SII_RS05390 de6ffb087467499ba9718511b9e6ef6d 87 SUPERFAMILY SSF55594 1 83 4.06E-28 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like SII_RS05390 de6ffb087467499ba9718511b9e6ef6d 87 Gene3D G3DSA:3.30.1340.10 1 83 1.9E-33 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like SII_RS05390 de6ffb087467499ba9718511b9e6ef6d 87 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 39 54 - T 22-04-2016 IPR002114 Phosphotransferase system, HPr serine phosphorylation site SII_RS05390 de6ffb087467499ba9718511b9e6ef6d 87 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 13 20 - T 22-04-2016 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site SII_RS05390 de6ffb087467499ba9718511b9e6ef6d 87 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 81 3.3E-32 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like SII_RS05390 de6ffb087467499ba9718511b9e6ef6d 87 PRINTS PR00107 Phosphocarrier protein signature 13 29 1.1E-26 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like SII_RS05390 de6ffb087467499ba9718511b9e6ef6d 87 PRINTS PR00107 Phosphocarrier protein signature 53 70 1.1E-26 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like SII_RS05390 de6ffb087467499ba9718511b9e6ef6d 87 PRINTS PR00107 Phosphocarrier protein signature 38 53 1.1E-26 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like SII_RS05390 de6ffb087467499ba9718511b9e6ef6d 87 PANTHER PTHR33705:SF2 1 84 3.2E-35 T 22-04-2016 SII_RS05390 de6ffb087467499ba9718511b9e6ef6d 87 Pfam PF00381 PTS HPr component phosphorylation site 3 81 9.9E-29 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like SII_RS05390 de6ffb087467499ba9718511b9e6ef6d 87 PANTHER PTHR33705 1 84 3.2E-35 T 22-04-2016 SII_RS05285 af708d9f76a00fcc543ab988c2f27113 457 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 7 457 33.988 T 22-04-2016 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 SII_RS05285 af708d9f76a00fcc543ab988c2f27113 457 Pfam PF12631 MnmE helical domain 129 454 2.9E-58 T 22-04-2016 IPR025867 MnmE, helical domain SII_RS05285 af708d9f76a00fcc543ab988c2f27113 457 Gene3D G3DSA:3.40.50.300 293 384 3.3E-13 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS05285 af708d9f76a00fcc543ab988c2f27113 457 SUPERFAMILY SSF52540 81 169 2.44E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS05285 af708d9f76a00fcc543ab988c2f27113 457 SUPERFAMILY SSF52540 204 372 2.44E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS05285 af708d9f76a00fcc543ab988c2f27113 457 Gene3D G3DSA:3.40.50.300 226 254 8.3E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS05285 af708d9f76a00fcc543ab988c2f27113 457 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 14 457 4.4E-129 T 22-04-2016 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 SII_RS05285 af708d9f76a00fcc543ab988c2f27113 457 PANTHER PTHR11649 10 457 1.2E-160 T 22-04-2016 SII_RS05285 af708d9f76a00fcc543ab988c2f27113 457 Gene3D G3DSA:3.30.1360.120 2 127 7.3E-45 T 22-04-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 SII_RS05285 af708d9f76a00fcc543ab988c2f27113 457 Gene3D G3DSA:1.20.120.430 128 188 8.6E-55 T 22-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 SII_RS05285 af708d9f76a00fcc543ab988c2f27113 457 Gene3D G3DSA:1.20.120.430 387 457 8.6E-55 T 22-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 SII_RS05285 af708d9f76a00fcc543ab988c2f27113 457 Gene3D G3DSA:1.20.120.430 255 278 8.6E-55 T 22-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 SII_RS05285 af708d9f76a00fcc543ab988c2f27113 457 Pfam PF10396 GTP-binding protein TrmE N-terminus 8 126 1.8E-39 T 22-04-2016 IPR018948 GTP-binding protein TrmE, N-terminal SII_RS05285 af708d9f76a00fcc543ab988c2f27113 457 SUPERFAMILY SSF116878 128 227 8.63E-49 T 22-04-2016 SII_RS05285 af708d9f76a00fcc543ab988c2f27113 457 SUPERFAMILY SSF116878 382 457 8.63E-49 T 22-04-2016 SII_RS05285 af708d9f76a00fcc543ab988c2f27113 457 PANTHER PTHR11649:SF56 10 457 1.2E-160 T 22-04-2016 SII_RS05285 af708d9f76a00fcc543ab988c2f27113 457 Pfam PF01926 50S ribosome-binding GTPase 227 338 2.3E-25 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 SII_RS05285 af708d9f76a00fcc543ab988c2f27113 457 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 226 369 1.6E-26 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 SII_RS01715 5654b765306295272aa3c5f7a10c50a3 189 Gene3D G3DSA:2.70.70.10 41 187 3.3E-59 T 22-04-2016 SII_RS01715 5654b765306295272aa3c5f7a10c50a3 189 PANTHER PTHR30175 38 138 1.1E-38 T 22-04-2016 SII_RS01715 5654b765306295272aa3c5f7a10c50a3 189 SUPERFAMILY SSF51261 41 183 4.88E-53 T 22-04-2016 IPR011055 Duplicated hybrid motif SII_RS01715 5654b765306295272aa3c5f7a10c50a3 189 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 42 165 2.2E-51 T 22-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SII_RS01715 5654b765306295272aa3c5f7a10c50a3 189 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 105 117 - T 22-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SII_RS01715 5654b765306295272aa3c5f7a10c50a3 189 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 47 163 8.9E-43 T 22-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SII_RS00545 6c1dad60b20dda6dcb2c2a18c265a708 463 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 133 351 3.0E-67 T 22-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SII_RS00545 6c1dad60b20dda6dcb2c2a18c265a708 463 Gene3D G3DSA:1.10.1140.10 366 428 1.6E-4 T 22-04-2016 IPR024034 ATPase, F1 complex beta subunit/V1 complex, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SII_RS00545 6c1dad60b20dda6dcb2c2a18c265a708 463 PANTHER PTHR15184 1 462 6.4E-281 T 22-04-2016 SII_RS00545 6c1dad60b20dda6dcb2c2a18c265a708 463 Gene3D G3DSA:3.40.50.300 78 355 2.0E-103 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS00545 6c1dad60b20dda6dcb2c2a18c265a708 463 PANTHER PTHR15184:SF11 1 462 6.4E-281 T 22-04-2016 SII_RS00545 6c1dad60b20dda6dcb2c2a18c265a708 463 SUPERFAMILY SSF52540 80 355 2.28E-83 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS00545 6c1dad60b20dda6dcb2c2a18c265a708 463 PIRSF PIRSF039114 1 463 7.4E-247 T 22-04-2016 IPR022879 V-type ATP synthase regulatory subunit B/beta SII_RS00545 6c1dad60b20dda6dcb2c2a18c265a708 463 Hamap MF_00310 V-type ATP synthase beta chain [atpB]. 4 460 60.308 T 22-04-2016 IPR022879 V-type ATP synthase regulatory subunit B/beta SII_RS00545 6c1dad60b20dda6dcb2c2a18c265a708 463 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 342 351 - T 22-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SII_RS00545 6c1dad60b20dda6dcb2c2a18c265a708 463 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 10 76 3.3E-13 T 22-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SII_RS02235 ae1e31ec5330888eb8847c3e4eec6684 147 PRINTS PR00369 Flavodoxin signature 53 64 4.5E-5 T 22-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 SII_RS02235 ae1e31ec5330888eb8847c3e4eec6684 147 PRINTS PR00369 Flavodoxin signature 5 18 4.5E-5 T 22-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 SII_RS02235 ae1e31ec5330888eb8847c3e4eec6684 147 PRINTS PR00369 Flavodoxin signature 82 92 4.5E-5 T 22-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 SII_RS02235 ae1e31ec5330888eb8847c3e4eec6684 147 Gene3D G3DSA:3.40.50.360 6 144 1.9E-40 T 22-04-2016 IPR029039 Flavoprotein-like domain SII_RS02235 ae1e31ec5330888eb8847c3e4eec6684 147 PANTHER PTHR19384:SF81 1 146 4.1E-52 T 22-04-2016 SII_RS02235 ae1e31ec5330888eb8847c3e4eec6684 147 Pfam PF00258 Flavodoxin 6 131 2.1E-22 T 22-04-2016 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 SII_RS02235 ae1e31ec5330888eb8847c3e4eec6684 147 TIGRFAM TIGR01753 flav_short: flavodoxin 5 143 3.8E-45 T 22-04-2016 IPR010087 Flavodoxin, short chain GO:0010181 SII_RS02235 ae1e31ec5330888eb8847c3e4eec6684 147 SUPERFAMILY SSF52218 5 145 7.74E-38 T 22-04-2016 IPR029039 Flavoprotein-like domain SII_RS02235 ae1e31ec5330888eb8847c3e4eec6684 147 PANTHER PTHR19384 1 146 4.1E-52 T 22-04-2016 SII_RS02235 ae1e31ec5330888eb8847c3e4eec6684 147 ProSitePatterns PS00201 Flavodoxin signature. 6 22 - T 22-04-2016 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 SII_RS08770 0e626640b55ead65d5a65bcf781031d5 92 PIRSF PIRSF002144 1 92 3.8E-32 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 SII_RS08770 0e626640b55ead65d5a65bcf781031d5 92 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 25.494 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 SII_RS08770 0e626640b55ead65d5a65bcf781031d5 92 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 92 2.1E-47 T 22-04-2016 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 SII_RS08770 0e626640b55ead65d5a65bcf781031d5 92 Gene3D G3DSA:3.30.860.10 1 92 1.1E-41 T 22-04-2016 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 SII_RS08770 0e626640b55ead65d5a65bcf781031d5 92 Pfam PF00203 Ribosomal protein S19 3 83 1.2E-37 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 SII_RS08770 0e626640b55ead65d5a65bcf781031d5 92 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 2.0E-23 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 SII_RS08770 0e626640b55ead65d5a65bcf781031d5 92 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 2.0E-23 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 SII_RS08770 0e626640b55ead65d5a65bcf781031d5 92 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 2.0E-23 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 SII_RS08770 0e626640b55ead65d5a65bcf781031d5 92 SUPERFAMILY SSF54570 3 84 6.02E-35 T 22-04-2016 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 SII_RS08770 0e626640b55ead65d5a65bcf781031d5 92 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 22-04-2016 IPR020934 Ribosomal protein S19 conserved site GO:0003723 SII_RS08770 0e626640b55ead65d5a65bcf781031d5 92 PANTHER PTHR11880 1 91 1.8E-54 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 SII_RS03605 41a0458d770d8aceeec4538f6e150009 231 Hamap MF_01200_B Orotidine 5'-phosphate decarboxylase [pyrF]. 3 229 38.984 T 22-04-2016 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 SII_RS03605 41a0458d770d8aceeec4538f6e150009 231 Gene3D G3DSA:3.20.20.70 2 228 4.3E-83 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SII_RS03605 41a0458d770d8aceeec4538f6e150009 231 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 7 224 6.2E-50 T 22-04-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 SII_RS03605 41a0458d770d8aceeec4538f6e150009 231 PANTHER PTHR32119:SF2 1 231 1.2E-104 T 22-04-2016 SII_RS03605 41a0458d770d8aceeec4538f6e150009 231 SMART SM00934 5 224 8.8E-95 T 22-04-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 SII_RS03605 41a0458d770d8aceeec4538f6e150009 231 PANTHER PTHR32119 1 231 1.2E-104 T 22-04-2016 SII_RS03605 41a0458d770d8aceeec4538f6e150009 231 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 6 225 4.7E-61 T 22-04-2016 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 SII_RS03605 41a0458d770d8aceeec4538f6e150009 231 SUPERFAMILY SSF51366 3 228 1.27E-70 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 SII_RS03605 41a0458d770d8aceeec4538f6e150009 231 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 58 71 - T 22-04-2016 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 SII_RS04610 f5c96105ffe9a05c4899a6bee5ffdae0 235 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 57 191 1.7E-17 T 22-04-2016 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 SII_RS04610 f5c96105ffe9a05c4899a6bee5ffdae0 235 PANTHER PTHR33308:SF3 46 195 9.0E-21 T 22-04-2016 SII_RS04610 f5c96105ffe9a05c4899a6bee5ffdae0 235 PANTHER PTHR33308 46 195 9.0E-21 T 22-04-2016 SII_RS04610 f5c96105ffe9a05c4899a6bee5ffdae0 235 SMART SM00047 42 195 1.7E-37 T 22-04-2016 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 SII_RS04610 f5c96105ffe9a05c4899a6bee5ffdae0 235 PRINTS PR01002 Flagellar protein FlgJ signature 70 88 1.0E-6 T 22-04-2016 SII_RS04610 f5c96105ffe9a05c4899a6bee5ffdae0 235 PRINTS PR01002 Flagellar protein FlgJ signature 172 190 1.0E-6 T 22-04-2016 SII_RS04610 f5c96105ffe9a05c4899a6bee5ffdae0 235 PRINTS PR01002 Flagellar protein FlgJ signature 130 151 1.0E-6 T 22-04-2016 SII_RS07400 1bbb7d086244f70ede253c615ec193d3 477 SMART SM00845 327 474 7.1E-71 T 22-04-2016 IPR018027 Asn/Gln amidotransferase GO:0016884 SII_RS07400 1bbb7d086244f70ede253c615ec193d3 477 Pfam PF02934 GatB/GatE catalytic domain 5 288 2.5E-109 T 22-04-2016 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic GO:0016874 SII_RS07400 1bbb7d086244f70ede253c615ec193d3 477 PANTHER PTHR11659:SF0 2 477 4.3E-247 T 22-04-2016 SII_RS07400 1bbb7d086244f70ede253c615ec193d3 477 SUPERFAMILY SSF89095 297 401 7.72E-34 T 22-04-2016 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related GO:0016884 SII_RS07400 1bbb7d086244f70ede253c615ec193d3 477 SUPERFAMILY SSF55931 4 295 9.16E-119 T 22-04-2016 SII_RS07400 1bbb7d086244f70ede253c615ec193d3 477 TIGRFAM TIGR00133 gatB: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit 1 474 1.8E-168 T 22-04-2016 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 SII_RS07400 1bbb7d086244f70ede253c615ec193d3 477 Pfam PF02637 GatB domain 327 474 3.6E-52 T 22-04-2016 IPR018027 Asn/Gln amidotransferase GO:0016884 SII_RS07400 1bbb7d086244f70ede253c615ec193d3 477 PANTHER PTHR11659 2 477 4.3E-247 T 22-04-2016 IPR017959 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit B /E GO:0016884 SII_RS07400 1bbb7d086244f70ede253c615ec193d3 477 ProSitePatterns PS01234 Glutamyl-tRNA(Gln) amidotransferase subunit B signature. 143 157 - T 22-04-2016 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site GO:0016884 SII_RS07400 1bbb7d086244f70ede253c615ec193d3 477 Hamap MF_00121 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B [gatB]. 2 475 37.674 T 22-04-2016 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 SII_RS09140 bc64b61ce227313726baa5948c6cae24 49 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 1 49 15.474 T 22-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SII_RS09140 bc64b61ce227313726baa5948c6cae24 49 PANTHER PTHR15238 1 49 1.7E-16 T 22-04-2016 SII_RS09140 bc64b61ce227313726baa5948c6cae24 49 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 3 49 2.9E-17 T 22-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SII_RS09140 bc64b61ce227313726baa5948c6cae24 49 SUPERFAMILY SSF57829 1 49 2.56E-15 T 22-04-2016 IPR011332 Zinc-binding ribosomal protein GO:0006412 SII_RS09140 bc64b61ce227313726baa5948c6cae24 49 ProSitePatterns PS00582 Ribosomal protein L33 signature. 17 36 - T 22-04-2016 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SII_RS09140 bc64b61ce227313726baa5948c6cae24 49 Pfam PF00471 Ribosomal protein L33 3 49 1.6E-17 T 22-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SII_RS07505 2a10088b43d275eb869c96c37cb02db2 314 TIGRFAM TIGR00218 manA: mannose-6-phosphate isomerase, class I 106 311 7.9E-42 T 22-04-2016 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882 SII_RS07505 2a10088b43d275eb869c96c37cb02db2 314 Gene3D G3DSA:2.60.120.10 226 314 1.5E-31 T 22-04-2016 IPR014710 RmlC-like jelly roll fold SII_RS07505 2a10088b43d275eb869c96c37cb02db2 314 Gene3D G3DSA:2.60.120.10 1 216 8.5E-79 T 22-04-2016 IPR014710 RmlC-like jelly roll fold SII_RS07505 2a10088b43d275eb869c96c37cb02db2 314 PIRSF PIRSF036894 2 314 7.2E-128 T 22-04-2016 IPR014628 Mannose-6-phosphate isomerase, Firmicutes type, short form GO:0004476|GO:0005975 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882 SII_RS07505 2a10088b43d275eb869c96c37cb02db2 314 PANTHER PTHR18964 1 255 5.4E-108 T 22-04-2016 SII_RS07505 2a10088b43d275eb869c96c37cb02db2 314 Pfam PF01238 Phosphomannose isomerase type I 5 196 8.9E-47 T 22-04-2016 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882 SII_RS07505 2a10088b43d275eb869c96c37cb02db2 314 Pfam PF01238 Phosphomannose isomerase type I 239 313 2.5E-6 T 22-04-2016 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882 SII_RS07505 2a10088b43d275eb869c96c37cb02db2 314 SUPERFAMILY SSF51182 1 305 6.68E-103 T 22-04-2016 IPR011051 RmlC-like cupin domain SII_RS07505 2a10088b43d275eb869c96c37cb02db2 314 PANTHER PTHR18964:SF114 1 255 5.4E-108 T 22-04-2016 SII_RS03480 4c7728ffde86beb9e79999b96b403576 857 SUPERFAMILY SSF142887 576 628 1.7E-17 T 22-04-2016 SII_RS03480 4c7728ffde86beb9e79999b96b403576 857 SUPERFAMILY SSF142887 318 368 1.7E-16 T 22-04-2016 SII_RS03480 4c7728ffde86beb9e79999b96b403576 857 TIGRFAM TIGR01363 strep_his_triad: streptococcal histidine triad protein 2 364 2.9E-155 T 22-04-2016 IPR023832 Histidine triad protein SII_RS03480 4c7728ffde86beb9e79999b96b403576 857 TIGRFAM TIGR01363 strep_his_triad: streptococcal histidine triad protein 561 653 3.7E-22 T 22-04-2016 IPR023832 Histidine triad protein SII_RS03480 4c7728ffde86beb9e79999b96b403576 857 Pfam PF04270 Streptococcal histidine triad protein 579 628 2.8E-23 T 22-04-2016 IPR006270 Streptococcal histidine triad repeat SII_RS03480 4c7728ffde86beb9e79999b96b403576 857 Pfam PF04270 Streptococcal histidine triad protein 675 697 0.27 T 22-04-2016 IPR006270 Streptococcal histidine triad repeat SII_RS03480 4c7728ffde86beb9e79999b96b403576 857 Pfam PF04270 Streptococcal histidine triad protein 187 236 3.0E-27 T 22-04-2016 IPR006270 Streptococcal histidine triad repeat SII_RS03480 4c7728ffde86beb9e79999b96b403576 857 Pfam PF04270 Streptococcal histidine triad protein 71 89 0.002 T 22-04-2016 IPR006270 Streptococcal histidine triad repeat SII_RS03480 4c7728ffde86beb9e79999b96b403576 857 Pfam PF04270 Streptococcal histidine triad protein 323 364 3.1E-14 T 22-04-2016 IPR006270 Streptococcal histidine triad repeat SII_RS03480 4c7728ffde86beb9e79999b96b403576 857 SUPERFAMILY SSF142887 184 236 1.57E-20 T 22-04-2016 SII_RS06790 59226367ab59219d9799fa5706d782e2 486 PIRSF PIRSF000484 3 478 1.6E-150 T 22-04-2016 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 SII_RS06790 59226367ab59219d9799fa5706d782e2 486 TIGRFAM TIGR01513 NAPRTase_put: nicotinate phosphoribosyltransferase 8 463 3.4E-189 T 22-04-2016 IPR006405 Nicotinate phosphoribosyltransferase pncB-type GO:0004516|GO:0019358 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 SII_RS06790 59226367ab59219d9799fa5706d782e2 486 Gene3D G3DSA:3.20.140.10 3 380 1.8E-132 T 22-04-2016 SII_RS06790 59226367ab59219d9799fa5706d782e2 486 SUPERFAMILY SSF54675 1 136 2.94E-48 T 22-04-2016 SII_RS06790 59226367ab59219d9799fa5706d782e2 486 Pfam PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family 153 334 1.1E-9 T 22-04-2016 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 SII_RS06790 59226367ab59219d9799fa5706d782e2 486 SUPERFAMILY SSF51690 137 476 1.62E-127 T 22-04-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 SII_RS06790 59226367ab59219d9799fa5706d782e2 486 PANTHER PTHR11098 9 478 3.1E-204 T 22-04-2016 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 SII_RS06790 59226367ab59219d9799fa5706d782e2 486 PANTHER PTHR11098:SF1 9 478 3.1E-204 T 22-04-2016 SII_RS08755 1636391d2c2a90bf1a6fc262f2796cf8 137 ProSitePatterns PS00701 Ribosomal protein L16 signature 2. 82 93 - T 22-04-2016 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SII_RS08755 1636391d2c2a90bf1a6fc262f2796cf8 137 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 127 1.9E-57 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 SII_RS08755 1636391d2c2a90bf1a6fc262f2796cf8 137 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 59 70 - T 22-04-2016 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SII_RS08755 1636391d2c2a90bf1a6fc262f2796cf8 137 PRINTS PR00060 Ribosomal protein L16 signature 88 117 2.9E-37 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 SII_RS08755 1636391d2c2a90bf1a6fc262f2796cf8 137 PRINTS PR00060 Ribosomal protein L16 signature 42 53 2.9E-37 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 SII_RS08755 1636391d2c2a90bf1a6fc262f2796cf8 137 PRINTS PR00060 Ribosomal protein L16 signature 24 36 2.9E-37 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 SII_RS08755 1636391d2c2a90bf1a6fc262f2796cf8 137 PRINTS PR00060 Ribosomal protein L16 signature 58 87 2.9E-37 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 SII_RS08755 1636391d2c2a90bf1a6fc262f2796cf8 137 Pfam PF00252 Ribosomal protein L16p/L10e 4 132 9.1E-49 T 22-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 SII_RS08755 1636391d2c2a90bf1a6fc262f2796cf8 137 SUPERFAMILY SSF54686 1 135 3.92E-55 T 22-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 SII_RS08755 1636391d2c2a90bf1a6fc262f2796cf8 137 Gene3D G3DSA:3.90.1170.10 23 135 1.4E-53 T 22-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 SII_RS08755 1636391d2c2a90bf1a6fc262f2796cf8 137 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 134 38.44 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 SII_RS08755 1636391d2c2a90bf1a6fc262f2796cf8 137 PANTHER PTHR12220 1 135 1.8E-70 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 SII_RS06985 ee48f7011ebc68a7934109a47a5036a9 752 PANTHER PTHR30627 10 651 1.4E-154 T 22-04-2016 SII_RS06985 ee48f7011ebc68a7934109a47a5036a9 752 SUPERFAMILY SSF56519 70 264 3.4E-44 T 22-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 SII_RS06985 ee48f7011ebc68a7934109a47a5036a9 752 Gene3D G3DSA:3.90.1310.10 167 271 2.2E-32 T 22-04-2016 SII_RS06985 ee48f7011ebc68a7934109a47a5036a9 752 SMART SM00740 692 752 1.2E-12 T 22-04-2016 IPR005543 PASTA domain SII_RS06985 ee48f7011ebc68a7934109a47a5036a9 752 Pfam PF00905 Penicillin binding protein transpeptidase domain 291 596 3.5E-71 T 22-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 SII_RS06985 ee48f7011ebc68a7934109a47a5036a9 752 SUPERFAMILY SSF56601 265 616 3.38E-75 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SII_RS06985 ee48f7011ebc68a7934109a47a5036a9 752 Pfam PF03717 Penicillin-binding Protein dimerisation domain 73 246 6.0E-27 T 22-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 SII_RS06985 ee48f7011ebc68a7934109a47a5036a9 752 PANTHER PTHR30627:SF1 10 651 1.4E-154 T 22-04-2016 SII_RS06985 ee48f7011ebc68a7934109a47a5036a9 752 Gene3D G3DSA:3.40.710.10 272 596 3.9E-74 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SII_RS06985 ee48f7011ebc68a7934109a47a5036a9 752 Pfam PF03793 PASTA domain 697 751 1.3E-7 T 22-04-2016 IPR005543 PASTA domain SII_RS06985 ee48f7011ebc68a7934109a47a5036a9 752 SUPERFAMILY SSF54184 697 751 2.22E-12 T 22-04-2016 SII_RS06985 ee48f7011ebc68a7934109a47a5036a9 752 SUPERFAMILY SSF54184 635 693 5.76E-13 T 22-04-2016 SII_RS07025 291e7caf1268188eec30e0f3d607e728 679 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 314 330 9.1E-33 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SII_RS07025 291e7caf1268188eec30e0f3d607e728 679 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 6 19 9.1E-33 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SII_RS07025 291e7caf1268188eec30e0f3d607e728 679 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 49 61 9.1E-33 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SII_RS07025 291e7caf1268188eec30e0f3d607e728 679 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 393 412 9.1E-33 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SII_RS07025 291e7caf1268188eec30e0f3d607e728 679 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 242 257 9.1E-33 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SII_RS07025 291e7caf1268188eec30e0f3d607e728 679 PANTHER PTHR30075:SF2 1 679 0.0 T 22-04-2016 SII_RS07025 291e7caf1268188eec30e0f3d607e728 679 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 5 547 1.3E-196 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SII_RS07025 291e7caf1268188eec30e0f3d607e728 679 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 2 676 3.7E-218 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SII_RS07025 291e7caf1268188eec30e0f3d607e728 679 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 2 676 26.116 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SII_RS07025 291e7caf1268188eec30e0f3d607e728 679 SUPERFAMILY SSF109604 336 490 9.77E-19 T 22-04-2016 SII_RS07025 291e7caf1268188eec30e0f3d607e728 679 Gene3D G3DSA:1.10.3210.10 358 462 2.3E-6 T 22-04-2016 IPR006674 HD domain SII_RS07025 291e7caf1268188eec30e0f3d607e728 679 PANTHER PTHR30075 1 679 0.0 T 22-04-2016 SII_RS08700 018d583dbcce041548a72d7fa2f6560d 60 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 4 58 6.5E-27 T 22-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 SII_RS08700 018d583dbcce041548a72d7fa2f6560d 60 Gene3D G3DSA:3.30.1390.20 1 59 2.6E-30 T 22-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain SII_RS08700 018d583dbcce041548a72d7fa2f6560d 60 SUPERFAMILY SSF55129 1 59 2.75E-21 T 22-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain SII_RS08700 018d583dbcce041548a72d7fa2f6560d 60 Pfam PF00327 Ribosomal protein L30p/L7e 4 54 4.2E-19 T 22-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain SII_RS08700 018d583dbcce041548a72d7fa2f6560d 60 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 1 58 19.591 T 22-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 SII_RS08700 018d583dbcce041548a72d7fa2f6560d 60 PANTHER PTHR15892 1 60 2.9E-27 T 22-04-2016 SII_RS08700 018d583dbcce041548a72d7fa2f6560d 60 ProSitePatterns PS00634 Ribosomal protein L30 signature. 22 54 - T 22-04-2016 IPR018038 Ribosomal protein L30, conserved site SII_RS08700 018d583dbcce041548a72d7fa2f6560d 60 PIRSF PIRSF002211 1 60 5.2E-28 T 22-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 SII_RS05330 77ac67d54f0bd442621fdff3ddf4ffc8 410 PANTHER PTHR30474:SF2 1 407 9.1E-127 T 22-04-2016 SII_RS05330 77ac67d54f0bd442621fdff3ddf4ffc8 410 PANTHER PTHR30474 1 407 9.1E-127 T 22-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 SII_RS05330 77ac67d54f0bd442621fdff3ddf4ffc8 410 Pfam PF01098 Cell cycle protein 13 391 6.6E-88 T 22-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 SII_RS02240 647d1eb47b3d8f1f254e5c597ea5b5ed 461 Pfam PF01458 Uncharacterized protein family (UPF0051) 207 432 7.5E-71 T 22-04-2016 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 SII_RS02240 647d1eb47b3d8f1f254e5c597ea5b5ed 461 SUPERFAMILY SSF101960 28 458 1.31E-137 T 22-04-2016 SII_RS02240 647d1eb47b3d8f1f254e5c597ea5b5ed 461 PANTHER PTHR30508 4 461 2.1E-221 T 22-04-2016 SII_RS02240 647d1eb47b3d8f1f254e5c597ea5b5ed 461 PANTHER PTHR30508:SF1 4 461 2.1E-221 T 22-04-2016 SII_RS02240 647d1eb47b3d8f1f254e5c597ea5b5ed 461 TIGRFAM TIGR01980 sufB: FeS assembly protein SufB 6 452 1.7E-224 T 22-04-2016 IPR010231 SUF system FeS cluster assembly, SufB GO:0016226 SII_RS04165 03eb6740c7f910d23c4a3c0e7e731967 442 Pfam PF05525 Branched-chain amino acid transport protein 4 432 1.7E-139 T 22-04-2016 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 SII_RS04165 03eb6740c7f910d23c4a3c0e7e731967 442 PANTHER PTHR30588 1 442 5.5E-227 T 22-04-2016 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 SII_RS04165 03eb6740c7f910d23c4a3c0e7e731967 442 PANTHER PTHR30588:SF2 1 442 5.5E-227 T 22-04-2016 SII_RS04165 03eb6740c7f910d23c4a3c0e7e731967 442 TIGRFAM TIGR00796 livcs: branched-chain amino acid transport system II carrier protein 10 419 3.6E-111 T 22-04-2016 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 SII_RS00230 6a775dc4e281826af7b1fe0e5ee0bf64 1241 SUPERFAMILY SSF56042 813 969 2.72E-11 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain SII_RS00230 6a775dc4e281826af7b1fe0e5ee0bf64 1241 Gene3D G3DSA:3.40.50.880 979 1215 1.1E-13 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like SII_RS00230 6a775dc4e281826af7b1fe0e5ee0bf64 1241 SUPERFAMILY SSF55326 634 811 7.33E-36 T 22-04-2016 SII_RS00230 6a775dc4e281826af7b1fe0e5ee0bf64 1241 PANTHER PTHR10099:SF1 2 235 4.6E-272 T 22-04-2016 SII_RS00230 6a775dc4e281826af7b1fe0e5ee0bf64 1241 PANTHER PTHR10099:SF1 262 1241 4.6E-272 T 22-04-2016 SII_RS00230 6a775dc4e281826af7b1fe0e5ee0bf64 1241 Gene3D G3DSA:3.30.1330.10 647 806 1.2E-24 T 22-04-2016 IPR016188 PurM-like, N-terminal domain SII_RS00230 6a775dc4e281826af7b1fe0e5ee0bf64 1241 Gene3D G3DSA:3.30.1330.10 220 235 1.5E-54 T 22-04-2016 IPR016188 PurM-like, N-terminal domain SII_RS00230 6a775dc4e281826af7b1fe0e5ee0bf64 1241 Gene3D G3DSA:3.30.1330.10 289 430 1.5E-54 T 22-04-2016 IPR016188 PurM-like, N-terminal domain SII_RS00230 6a775dc4e281826af7b1fe0e5ee0bf64 1241 PANTHER PTHR10099 2 235 4.6E-272 T 22-04-2016 SII_RS00230 6a775dc4e281826af7b1fe0e5ee0bf64 1241 PANTHER PTHR10099 262 1241 4.6E-272 T 22-04-2016 SII_RS00230 6a775dc4e281826af7b1fe0e5ee0bf64 1241 SUPERFAMILY SSF52317 974 1238 7.69E-66 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like SII_RS00230 6a775dc4e281826af7b1fe0e5ee0bf64 1241 SUPERFAMILY SSF56042 440 606 1.38E-37 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain SII_RS00230 6a775dc4e281826af7b1fe0e5ee0bf64 1241 SMART SM01211 976 1238 3.0E-105 T 22-04-2016 SII_RS00230 6a775dc4e281826af7b1fe0e5ee0bf64 1241 Pfam PF02769 AIR synthase related protein, C-terminal domain 439 591 9.8E-24 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain SII_RS00230 6a775dc4e281826af7b1fe0e5ee0bf64 1241 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 976 1238 4.6E-80 T 22-04-2016 SII_RS00230 6a775dc4e281826af7b1fe0e5ee0bf64 1241 TIGRFAM TIGR01857 FGAM-synthase: phosphoribosylformylglycinamidine synthase 3 1238 0.0 T 22-04-2016 IPR010141 Phosphoribosylformylglycinamidine synthase, FGAM SII_RS00230 6a775dc4e281826af7b1fe0e5ee0bf64 1241 SUPERFAMILY SSF55326 195 231 5.58E-33 T 22-04-2016 SII_RS00230 6a775dc4e281826af7b1fe0e5ee0bf64 1241 SUPERFAMILY SSF55326 303 429 5.58E-33 T 22-04-2016 SII_RS04140 29b6d59ce9361c2fc50d84db3cd2363a 569 Gene3D G3DSA:3.30.450.20 176 283 2.7E-16 T 22-04-2016 SII_RS04140 29b6d59ce9361c2fc50d84db3cd2363a 569 Gene3D G3DSA:3.30.450.20 80 175 2.8E-11 T 22-04-2016 SII_RS04140 29b6d59ce9361c2fc50d84db3cd2363a 569 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 468 565 1.9E-5 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SII_RS04140 29b6d59ce9361c2fc50d84db3cd2363a 569 Pfam PF02743 Cache domain 36 268 2.4E-32 T 22-04-2016 IPR033479 Double Cache domain 1 SII_RS04140 29b6d59ce9361c2fc50d84db3cd2363a 569 SUPERFAMILY SSF103190 39 116 6.8E-5 T 22-04-2016 IPR029151 Periplasmic sensor domain-like SII_RS04140 29b6d59ce9361c2fc50d84db3cd2363a 569 Gene3D G3DSA:3.30.565.10 418 566 9.2E-19 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SII_RS04140 29b6d59ce9361c2fc50d84db3cd2363a 569 Pfam PF06580 Histidine kinase 369 448 5.5E-26 T 22-04-2016 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 SII_RS04140 29b6d59ce9361c2fc50d84db3cd2363a 569 PANTHER PTHR34220 1 568 9.1E-63 T 22-04-2016 SII_RS04140 29b6d59ce9361c2fc50d84db3cd2363a 569 SMART SM00304 305 357 4.4E-4 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SII_RS04140 29b6d59ce9361c2fc50d84db3cd2363a 569 SMART SM00387 463 566 4.0E-5 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SII_RS04140 29b6d59ce9361c2fc50d84db3cd2363a 569 SUPERFAMILY SSF55874 424 563 8.77E-16 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SII_RS04140 29b6d59ce9361c2fc50d84db3cd2363a 569 Pfam PF00672 HAMP domain 286 352 2.6E-12 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SII_RS04140 29b6d59ce9361c2fc50d84db3cd2363a 569 PANTHER PTHR34220:SF3 1 568 9.1E-63 T 22-04-2016 SII_RS03880 c0a943db16dda4f40a3aa13608c454a8 580 PANTHER PTHR24221 9 580 4.2E-234 T 22-04-2016 SII_RS03880 c0a943db16dda4f40a3aa13608c454a8 580 SMART SM00382 363 565 5.2E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain SII_RS03880 c0a943db16dda4f40a3aa13608c454a8 580 Pfam PF00664 ABC transporter transmembrane region 22 293 6.2E-43 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SII_RS03880 c0a943db16dda4f40a3aa13608c454a8 580 Gene3D G3DSA:3.40.50.300 337 569 7.1E-78 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS03880 c0a943db16dda4f40a3aa13608c454a8 580 Pfam PF00005 ABC transporter 354 503 6.7E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SII_RS03880 c0a943db16dda4f40a3aa13608c454a8 580 ProSitePatterns PS00211 ABC transporters family signature. 475 489 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SII_RS03880 c0a943db16dda4f40a3aa13608c454a8 580 SUPERFAMILY SSF90123 9 324 2.09E-72 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SII_RS03880 c0a943db16dda4f40a3aa13608c454a8 580 Gene3D G3DSA:1.20.1560.10 9 323 7.9E-76 T 22-04-2016 SII_RS03880 c0a943db16dda4f40a3aa13608c454a8 580 SUPERFAMILY SSF52540 328 573 6.2E-87 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS03880 c0a943db16dda4f40a3aa13608c454a8 580 PANTHER PTHR24221:SF258 9 580 4.2E-234 T 22-04-2016 SII_RS06210 47a5399b003e1dc34f4d2804bdac8702 665 PANTHER PTHR11946 3 621 1.7E-294 T 22-04-2016 SII_RS06210 47a5399b003e1dc34f4d2804bdac8702 665 SUPERFAMILY SSF52374 4 364 4.02E-104 T 22-04-2016 SII_RS06210 47a5399b003e1dc34f4d2804bdac8702 665 Gene3D G3DSA:2.40.50.140 557 664 9.7E-39 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SII_RS06210 47a5399b003e1dc34f4d2804bdac8702 665 Gene3D G3DSA:3.40.50.620 237 347 1.1E-73 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SII_RS06210 47a5399b003e1dc34f4d2804bdac8702 665 Gene3D G3DSA:3.40.50.620 4 115 1.1E-73 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SII_RS06210 47a5399b003e1dc34f4d2804bdac8702 665 PRINTS PR01041 Methionyl-tRNA synthetase signature 361 372 1.2E-33 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 SII_RS06210 47a5399b003e1dc34f4d2804bdac8702 665 PRINTS PR01041 Methionyl-tRNA synthetase signature 235 246 1.2E-33 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 SII_RS06210 47a5399b003e1dc34f4d2804bdac8702 665 PRINTS PR01041 Methionyl-tRNA synthetase signature 41 55 1.2E-33 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 SII_RS06210 47a5399b003e1dc34f4d2804bdac8702 665 PRINTS PR01041 Methionyl-tRNA synthetase signature 89 100 1.2E-33 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 SII_RS06210 47a5399b003e1dc34f4d2804bdac8702 665 PRINTS PR01041 Methionyl-tRNA synthetase signature 269 284 1.2E-33 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 SII_RS06210 47a5399b003e1dc34f4d2804bdac8702 665 PRINTS PR01041 Methionyl-tRNA synthetase signature 9 22 1.2E-33 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 SII_RS06210 47a5399b003e1dc34f4d2804bdac8702 665 SUPERFAMILY SSF50249 562 663 3.43E-29 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SII_RS06210 47a5399b003e1dc34f4d2804bdac8702 665 Pfam PF09334 tRNA synthetases class I (M) 7 373 7.6E-112 T 22-04-2016 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SII_RS06210 47a5399b003e1dc34f4d2804bdac8702 665 Pfam PF01588 Putative tRNA binding domain 569 662 3.9E-25 T 22-04-2016 IPR002547 tRNA-binding domain GO:0000049 Reactome: REACT_71 SII_RS06210 47a5399b003e1dc34f4d2804bdac8702 665 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 7 495 3.2E-165 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 SII_RS06210 47a5399b003e1dc34f4d2804bdac8702 665 Gene3D G3DSA:2.170.220.10 118 236 1.3E-45 T 22-04-2016 SII_RS06210 47a5399b003e1dc34f4d2804bdac8702 665 Gene3D G3DSA:1.10.730.10 350 521 3.8E-49 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SII_RS06210 47a5399b003e1dc34f4d2804bdac8702 665 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 538 664 1.6E-39 T 22-04-2016 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 SII_RS06210 47a5399b003e1dc34f4d2804bdac8702 665 Hamap MF_01228 Methionine--tRNA ligase [metG]. 1 520 48.703 T 22-04-2016 IPR023457 Methionine-tRNA synthetase, type 2 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 SII_RS06210 47a5399b003e1dc34f4d2804bdac8702 665 SUPERFAMILY SSF47323 366 534 8.6E-42 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SII_RS06210 47a5399b003e1dc34f4d2804bdac8702 665 PANTHER PTHR11946:SF1 3 621 1.7E-294 T 22-04-2016 SII_RS01880 9c35844bd4d9370c58f61247ad81ef70 479 PANTHER PTHR32024 1 479 2.6E-200 T 22-04-2016 SII_RS01880 9c35844bd4d9370c58f61247ad81ef70 479 PANTHER PTHR32024:SF2 1 479 2.6E-200 T 22-04-2016 SII_RS01880 9c35844bd4d9370c58f61247ad81ef70 479 Pfam PF02386 Cation transport protein 49 474 1.9E-49 T 22-04-2016 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 SII_RS01880 9c35844bd4d9370c58f61247ad81ef70 479 PIRSF PIRSF006247 1 478 1.2E-130 T 22-04-2016 IPR004772 TrkH potassium transport family GO:0016021|GO:0022820|GO:0071805 SII_RS06125 6d7b8bbfefc369533e85f1be866e2a4f 212 Pfam PF02502 Ribose/Galactose Isomerase 20 112 6.4E-21 T 22-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 SII_RS06125 6d7b8bbfefc369533e85f1be866e2a4f 212 Gene3D G3DSA:3.40.1400.10 1 207 1.4E-67 T 22-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 SII_RS06125 6d7b8bbfefc369533e85f1be866e2a4f 212 PANTHER PTHR30345:SF0 1 169 8.1E-14 T 22-04-2016 SII_RS06125 6d7b8bbfefc369533e85f1be866e2a4f 212 PANTHER PTHR30345 1 169 8.1E-14 T 22-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 SII_RS06125 6d7b8bbfefc369533e85f1be866e2a4f 212 SUPERFAMILY SSF89623 1 150 1.57E-25 T 22-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 SII_RS07715 7b5b304c9bcd05788159f2dcb4ab3b5c 334 Pfam PF00356 Bacterial regulatory proteins, lacI family 6 52 8.6E-16 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SII_RS07715 7b5b304c9bcd05788159f2dcb4ab3b5c 334 Gene3D G3DSA:3.40.50.2300 65 172 3.7E-32 T 22-04-2016 SII_RS07715 7b5b304c9bcd05788159f2dcb4ab3b5c 334 Gene3D G3DSA:3.40.50.2300 173 332 3.1E-29 T 22-04-2016 SII_RS07715 7b5b304c9bcd05788159f2dcb4ab3b5c 334 PANTHER PTHR30146 3 332 2.0E-170 T 22-04-2016 SII_RS07715 7b5b304c9bcd05788159f2dcb4ab3b5c 334 SUPERFAMILY SSF53822 62 321 6.85E-49 T 22-04-2016 IPR028082 Periplasmic binding protein-like I SII_RS07715 7b5b304c9bcd05788159f2dcb4ab3b5c 334 SUPERFAMILY SSF47413 3 63 4.76E-15 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SII_RS07715 7b5b304c9bcd05788159f2dcb4ab3b5c 334 PANTHER PTHR30146:SF40 3 332 2.0E-170 T 22-04-2016 SII_RS07715 7b5b304c9bcd05788159f2dcb4ab3b5c 334 Pfam PF13407 Periplasmic binding protein domain 66 312 2.6E-18 T 22-04-2016 IPR025997 Periplasmic binding protein SII_RS07715 7b5b304c9bcd05788159f2dcb4ab3b5c 334 Gene3D G3DSA:1.10.260.40 6 64 9.5E-23 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SII_RS07715 7b5b304c9bcd05788159f2dcb4ab3b5c 334 SMART SM00354 4 75 4.0E-29 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SII_RS06560 f5b9aa388ecb38a03624192d51e66a9e 433 SMART SM00490 316 399 1.2E-11 T 22-04-2016 IPR001650 Helicase, C-terminal SII_RS06560 f5b9aa388ecb38a03624192d51e66a9e 433 Gene3D G3DSA:3.40.50.300 282 422 1.2E-19 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS06560 f5b9aa388ecb38a03624192d51e66a9e 433 Pfam PF00271 Helicase conserved C-terminal domain 291 398 1.6E-13 T 22-04-2016 IPR001650 Helicase, C-terminal SII_RS06560 f5b9aa388ecb38a03624192d51e66a9e 433 SMART SM00487 92 272 8.4E-11 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain SII_RS06560 f5b9aa388ecb38a03624192d51e66a9e 433 SUPERFAMILY SSF52540 110 410 3.01E-33 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS06560 f5b9aa388ecb38a03624192d51e66a9e 433 Pfam PF00270 DEAD/DEAH box helicase 98 245 6.6E-7 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 SII_RS06560 f5b9aa388ecb38a03624192d51e66a9e 433 Gene3D G3DSA:3.40.50.300 90 260 2.0E-19 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS06705 c530dbc8468d6fb1405a6ebf0843ef58 437 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 251 261 2.8E-28 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SII_RS06705 c530dbc8468d6fb1405a6ebf0843ef58 437 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 319 331 2.8E-28 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SII_RS06705 c530dbc8468d6fb1405a6ebf0843ef58 437 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 222 236 2.8E-28 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SII_RS06705 c530dbc8468d6fb1405a6ebf0843ef58 437 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 369 385 2.8E-28 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SII_RS06705 c530dbc8468d6fb1405a6ebf0843ef58 437 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 418 435 2.8E-28 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SII_RS06705 c530dbc8468d6fb1405a6ebf0843ef58 437 Pfam PF01029 NusB family 7 128 4.8E-28 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 SII_RS06705 c530dbc8468d6fb1405a6ebf0843ef58 437 SUPERFAMILY SSF48013 6 130 1.11E-33 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 SII_RS06705 c530dbc8468d6fb1405a6ebf0843ef58 437 TIGRFAM TIGR00563 rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase 9 434 6.2E-109 T 22-04-2016 IPR004573 rRNA small subunit methyltransferase B GO:0006364|GO:0008649 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SII_RS06705 c530dbc8468d6fb1405a6ebf0843ef58 437 PANTHER PTHR22807 17 437 1.2E-110 T 22-04-2016 SII_RS06705 c530dbc8468d6fb1405a6ebf0843ef58 437 Gene3D G3DSA:1.10.940.10 6 156 1.5E-41 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 SII_RS06705 c530dbc8468d6fb1405a6ebf0843ef58 437 Pfam PF01189 16S rRNA methyltransferase RsmB/F 241 434 4.2E-54 T 22-04-2016 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SII_RS06705 c530dbc8468d6fb1405a6ebf0843ef58 437 SUPERFAMILY SSF53335 143 436 9.71E-63 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SII_RS06705 c530dbc8468d6fb1405a6ebf0843ef58 437 Gene3D G3DSA:3.40.50.150 232 435 1.4E-55 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SII_RS06705 c530dbc8468d6fb1405a6ebf0843ef58 437 PANTHER PTHR22807:SF30 17 437 1.2E-110 T 22-04-2016 SII_RS06705 c530dbc8468d6fb1405a6ebf0843ef58 437 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 318 329 - T 22-04-2016 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SII_RS07425 834f081c31970859ef995864e85e102a 262 Pfam PF06018 CodY GAF-like domain 3 182 9.8E-71 T 22-04-2016 IPR010312 GTP-sensing transcriptional pleiotropic repressor CodY, N-terminal GO:0003677|GO:0005525 SII_RS07425 834f081c31970859ef995864e85e102a 262 TIGRFAM TIGR02787 codY_Gpos: GTP-sensing transcriptional pleiotropic repressor CodY 4 257 3.4E-124 T 22-04-2016 IPR014154 GTP-sensing transcriptional pleiotropic repressor CodY GO:0003677|GO:0003700|GO:0005525|GO:0045892 SII_RS07425 834f081c31970859ef995864e85e102a 262 Gene3D G3DSA:1.10.10.10 191 237 9.1E-8 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SII_RS07425 834f081c31970859ef995864e85e102a 262 PIRSF PIRSF011572 1 261 2.2E-117 T 22-04-2016 IPR014154 GTP-sensing transcriptional pleiotropic repressor CodY GO:0003677|GO:0003700|GO:0005525|GO:0045892 SII_RS07425 834f081c31970859ef995864e85e102a 262 SUPERFAMILY SSF55781 29 169 1.33E-5 T 22-04-2016 IPR029016 GAF domain-like SII_RS07425 834f081c31970859ef995864e85e102a 262 PANTHER PTHR40062 2 262 5.5E-134 T 22-04-2016 SII_RS07425 834f081c31970859ef995864e85e102a 262 SUPERFAMILY SSF46785 171 260 2.16E-39 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SII_RS07425 834f081c31970859ef995864e85e102a 262 Pfam PF08222 CodY helix-turn-helix domain 202 259 1.2E-34 T 22-04-2016 IPR013198 GTP-sensing helix-turn-helix, CodY, C-terminal SII_RS07425 834f081c31970859ef995864e85e102a 262 Hamap MF_00621 GTP-sensing transcriptional pleiotropic repressor CodY [codY]. 1 262 125.18 T 22-04-2016 IPR014154 GTP-sensing transcriptional pleiotropic repressor CodY GO:0003677|GO:0003700|GO:0005525|GO:0045892 SII_RS04210 333e19a792cc5737df3cd1823fd16d8a 314 SUPERFAMILY SSF46689 4 114 8.06E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SII_RS04210 333e19a792cc5737df3cd1823fd16d8a 314 PANTHER PTHR10948 1 310 2.8E-69 T 22-04-2016 SII_RS04210 333e19a792cc5737df3cd1823fd16d8a 314 Gene3D G3DSA:3.30.420.10 160 308 1.4E-13 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SII_RS04210 333e19a792cc5737df3cd1823fd16d8a 314 Pfam PF13936 Helix-turn-helix domain 2 44 5.6E-14 T 22-04-2016 IPR025246 Transposase IS30-like HTH domain SII_RS04210 333e19a792cc5737df3cd1823fd16d8a 314 Gene3D G3DSA:1.10.10.60 7 43 1.6E-4 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SII_RS04210 333e19a792cc5737df3cd1823fd16d8a 314 SUPERFAMILY SSF53098 160 309 3.16E-26 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SII_RS04210 333e19a792cc5737df3cd1823fd16d8a 314 ProSitePatterns PS01043 Transposases, IS30 family, signature. 254 270 - T 22-04-2016 IPR001598 Transposase, IS30, conserved site GO:0003677|GO:0004803|GO:0006313 SII_RS04210 333e19a792cc5737df3cd1823fd16d8a 314 Pfam PF00665 Integrase core domain 160 267 4.9E-15 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 SII_RS03905 9af653522f3923cf8974a3650b7f2ce8 283 TIGRFAM TIGR03596 GTPase_YlqF: ribosome biogenesis GTP-binding protein YlqF 4 274 1.4E-106 T 22-04-2016 IPR019991 GTP-binding protein, ribosome biogenesis SII_RS03905 9af653522f3923cf8974a3650b7f2ce8 283 PIRSF PIRSF006230 1 277 1.2E-96 T 22-04-2016 IPR016478 GTPase, MTG1 SII_RS03905 9af653522f3923cf8974a3650b7f2ce8 283 SUPERFAMILY SSF52540 10 192 4.1E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS03905 9af653522f3923cf8974a3650b7f2ce8 283 Pfam PF01926 50S ribosome-binding GTPase 124 188 7.1E-15 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 SII_RS03905 9af653522f3923cf8974a3650b7f2ce8 283 PANTHER PTHR11089 4 278 8.2E-68 T 22-04-2016 SII_RS03905 9af653522f3923cf8974a3650b7f2ce8 283 Gene3D G3DSA:1.10.1580.10 181 267 3.5E-23 T 22-04-2016 IPR023179 GTP-binding protein, orthogonal bundle domain SII_RS03905 9af653522f3923cf8974a3650b7f2ce8 283 Gene3D G3DSA:3.40.50.300 16 178 5.1E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS00010 5e1b23cc9a478d3155341ce31ea5e9a6 378 SUPERFAMILY SSF55979 3 128 1.0E-16 T 22-04-2016 SII_RS00010 5e1b23cc9a478d3155341ce31ea5e9a6 378 PIRSF PIRSF000804 2 378 2.9E-95 T 22-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SII_RS00010 5e1b23cc9a478d3155341ce31ea5e9a6 378 Pfam PF02767 DNA polymerase III beta subunit, central domain 137 251 3.0E-30 T 22-04-2016 IPR022637 DNA polymerase III, beta chain, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SII_RS00010 5e1b23cc9a478d3155341ce31ea5e9a6 378 PANTHER PTHR30478 4 378 4.3E-113 T 22-04-2016 SII_RS00010 5e1b23cc9a478d3155341ce31ea5e9a6 378 Gene3D G3DSA:3.10.150.10 135 254 1.0E-32 T 22-04-2016 SII_RS00010 5e1b23cc9a478d3155341ce31ea5e9a6 378 SMART SM00480 18 373 3.3E-146 T 22-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SII_RS00010 5e1b23cc9a478d3155341ce31ea5e9a6 378 SUPERFAMILY SSF55979 133 251 1.92E-24 T 22-04-2016 SII_RS00010 5e1b23cc9a478d3155341ce31ea5e9a6 378 SUPERFAMILY SSF55979 253 377 7.46E-30 T 22-04-2016 SII_RS00010 5e1b23cc9a478d3155341ce31ea5e9a6 378 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 254 375 2.1E-28 T 22-04-2016 IPR022635 DNA polymerase III, beta chain, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SII_RS00010 5e1b23cc9a478d3155341ce31ea5e9a6 378 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 3 377 1.6E-88 T 22-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SII_RS00010 5e1b23cc9a478d3155341ce31ea5e9a6 378 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 3 126 3.5E-24 T 22-04-2016 IPR022634 DNA polymerase III, beta chain, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SII_RS00010 5e1b23cc9a478d3155341ce31ea5e9a6 378 Gene3D G3DSA:3.10.150.10 257 378 2.8E-32 T 22-04-2016 SII_RS00010 5e1b23cc9a478d3155341ce31ea5e9a6 378 Gene3D G3DSA:3.10.150.10 3 129 1.1E-21 T 22-04-2016 SII_RS03115 e9aa437930a8af1db9bc45a608d58290 293 SUPERFAMILY SSF51569 11 292 3.35E-87 T 22-04-2016 SII_RS03115 e9aa437930a8af1db9bc45a608d58290 293 Pfam PF00701 Dihydrodipicolinate synthetase family 9 285 1.1E-88 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 SII_RS03115 e9aa437930a8af1db9bc45a608d58290 293 PRINTS PR00146 Dihydrodipicolinate synthase signature 77 95 5.8E-32 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 SII_RS03115 e9aa437930a8af1db9bc45a608d58290 293 PRINTS PR00146 Dihydrodipicolinate synthase signature 110 126 5.8E-32 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 SII_RS03115 e9aa437930a8af1db9bc45a608d58290 293 PRINTS PR00146 Dihydrodipicolinate synthase signature 135 152 5.8E-32 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 SII_RS03115 e9aa437930a8af1db9bc45a608d58290 293 PRINTS PR00146 Dihydrodipicolinate synthase signature 41 62 5.8E-32 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 SII_RS03115 e9aa437930a8af1db9bc45a608d58290 293 PANTHER PTHR12128:SF34 1 287 4.6E-116 T 22-04-2016 SII_RS03115 e9aa437930a8af1db9bc45a608d58290 293 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 7 293 58.78 T 22-04-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 SII_RS03115 e9aa437930a8af1db9bc45a608d58290 293 PANTHER PTHR12128 1 287 4.6E-116 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 SII_RS03115 e9aa437930a8af1db9bc45a608d58290 293 Gene3D G3DSA:3.20.20.70 10 291 9.7E-102 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SII_RS03115 e9aa437930a8af1db9bc45a608d58290 293 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 11 287 4.7E-95 T 22-04-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 SII_RS03115 e9aa437930a8af1db9bc45a608d58290 293 SMART SM01130 7 291 5.5E-112 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 SII_RS03115 e9aa437930a8af1db9bc45a608d58290 293 PIRSF PIRSF001365 5 293 4.5E-84 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 SII_RS03115 e9aa437930a8af1db9bc45a608d58290 293 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 140 170 - T 22-04-2016 IPR020625 Schiff base-forming aldolase, active site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 SII_RS03115 e9aa437930a8af1db9bc45a608d58290 293 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 44 61 - T 22-04-2016 IPR020624 Schiff base-forming aldolase, conserved site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 SII_RS07440 9b2299f4f035befb028a3384c4abf91f 462 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 6 246 4.8E-22 T 22-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 SII_RS07440 9b2299f4f035befb028a3384c4abf91f 462 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 295 407 4.8E-26 T 22-04-2016 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31|UniPathway: UPA00031 SII_RS07440 9b2299f4f035befb028a3384c4abf91f 462 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 6 273 1.5E-54 T 22-04-2016 IPR000150 Cof protein GO:0016787 SII_RS07440 9b2299f4f035befb028a3384c4abf91f 462 Gene3D G3DSA:3.40.50.1000 1 72 7.2E-54 T 22-04-2016 IPR023214 HAD-like domain SII_RS07440 9b2299f4f035befb028a3384c4abf91f 462 Gene3D G3DSA:3.40.50.1000 182 277 7.2E-54 T 22-04-2016 IPR023214 HAD-like domain SII_RS07440 9b2299f4f035befb028a3384c4abf91f 462 ProSitePatterns PS01228 Hypothetical cof family signature 1. 5 16 - T 22-04-2016 IPR000150 Cof protein GO:0016787 SII_RS07440 9b2299f4f035befb028a3384c4abf91f 462 Gene3D G3DSA:1.10.3420.10 287 454 7.3E-57 T 22-04-2016 IPR023292 NTP pyrophosphohydrolase-like domain SII_RS07440 9b2299f4f035befb028a3384c4abf91f 462 PANTHER PTHR10000:SF25 1 279 3.2E-112 T 22-04-2016 SII_RS07440 9b2299f4f035befb028a3384c4abf91f 462 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 273 8.8E-65 T 22-04-2016 IPR023214 HAD-like domain SII_RS07440 9b2299f4f035befb028a3384c4abf91f 462 SUPERFAMILY SSF56784 1 276 2.12E-64 T 22-04-2016 IPR023214 HAD-like domain SII_RS07440 9b2299f4f035befb028a3384c4abf91f 462 PANTHER PTHR10000 1 279 3.2E-112 T 22-04-2016 SII_RS07440 9b2299f4f035befb028a3384c4abf91f 462 ProSitePatterns PS01229 Hypothetical cof family signature 2. 227 249 - T 22-04-2016 SII_RS03535 2c28b5b620c74e2df7dbb27ea1f3c398 392 SUPERFAMILY SSF55060 210 390 3.06E-54 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain SII_RS03535 2c28b5b620c74e2df7dbb27ea1f3c398 392 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 125 136 - T 22-04-2016 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 SII_RS03535 2c28b5b620c74e2df7dbb27ea1f3c398 392 ProSitePatterns PS00106 Galactokinase signature. 30 41 - T 22-04-2016 IPR019741 Galactokinase, conserved site KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 SII_RS03535 2c28b5b620c74e2df7dbb27ea1f3c398 392 Pfam PF10509 Galactokinase galactose-binding signature 13 61 7.1E-23 T 22-04-2016 IPR019539 Galactokinase galactose-binding domain KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 SII_RS03535 2c28b5b620c74e2df7dbb27ea1f3c398 392 Pfam PF08544 GHMP kinases C terminal 288 368 8.3E-15 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain SII_RS03535 2c28b5b620c74e2df7dbb27ea1f3c398 392 Gene3D G3DSA:3.30.230.10 7 213 2.4E-75 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SII_RS03535 2c28b5b620c74e2df7dbb27ea1f3c398 392 PANTHER PTHR10457 2 388 3.8E-125 T 22-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 SII_RS03535 2c28b5b620c74e2df7dbb27ea1f3c398 392 SUPERFAMILY SSF54211 7 206 7.44E-63 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SII_RS03535 2c28b5b620c74e2df7dbb27ea1f3c398 392 Gene3D G3DSA:3.30.70.890 214 389 1.0E-58 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain SII_RS03535 2c28b5b620c74e2df7dbb27ea1f3c398 392 TIGRFAM TIGR00131 gal_kin: galactokinase 8 385 1.0E-121 T 22-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 SII_RS03535 2c28b5b620c74e2df7dbb27ea1f3c398 392 PANTHER PTHR10457:SF6 2 388 3.8E-125 T 22-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 SII_RS03535 2c28b5b620c74e2df7dbb27ea1f3c398 392 Pfam PF00288 GHMP kinases N terminal domain 118 185 6.8E-12 T 22-04-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 SII_RS03535 2c28b5b620c74e2df7dbb27ea1f3c398 392 PIRSF PIRSF000530 1 392 2.4E-126 T 22-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 SII_RS03535 2c28b5b620c74e2df7dbb27ea1f3c398 392 PRINTS PR00473 Galactokinase signature 95 106 8.2E-30 T 22-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 SII_RS03535 2c28b5b620c74e2df7dbb27ea1f3c398 392 PRINTS PR00473 Galactokinase signature 116 134 8.2E-30 T 22-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 SII_RS03535 2c28b5b620c74e2df7dbb27ea1f3c398 392 PRINTS PR00473 Galactokinase signature 273 287 8.2E-30 T 22-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 SII_RS03535 2c28b5b620c74e2df7dbb27ea1f3c398 392 PRINTS PR00473 Galactokinase signature 30 48 8.2E-30 T 22-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 SII_RS03535 2c28b5b620c74e2df7dbb27ea1f3c398 392 PRINTS PR00959 Mevalonate kinase family signature 123 145 1.0E-43 T 22-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 SII_RS03535 2c28b5b620c74e2df7dbb27ea1f3c398 392 PRINTS PR00959 Mevalonate kinase family signature 337 354 1.0E-43 T 22-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 SII_RS03535 2c28b5b620c74e2df7dbb27ea1f3c398 392 PRINTS PR00959 Mevalonate kinase family signature 166 185 1.0E-43 T 22-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 SII_RS03535 2c28b5b620c74e2df7dbb27ea1f3c398 392 PRINTS PR00959 Mevalonate kinase family signature 28 52 1.0E-43 T 22-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 SII_RS03535 2c28b5b620c74e2df7dbb27ea1f3c398 392 Hamap MF_00246 Galactokinase [galK]. 28 390 49.24 T 22-04-2016 IPR022963 Galactokinase, bacterial GO:0004335|GO:0006012 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 SII_RS08795 5ec936ba858301d19921fc5efc5040e5 102 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 3.5E-19 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 SII_RS08795 5ec936ba858301d19921fc5efc5040e5 102 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 3.5E-19 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 SII_RS08795 5ec936ba858301d19921fc5efc5040e5 102 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 3.5E-19 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 SII_RS08795 5ec936ba858301d19921fc5efc5040e5 102 PANTHER PTHR11700 1 102 8.1E-49 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 SII_RS08795 5ec936ba858301d19921fc5efc5040e5 102 SUPERFAMILY SSF54999 5 102 8.5E-37 T 22-04-2016 IPR027486 Ribosomal protein S10 domain SII_RS08795 5ec936ba858301d19921fc5efc5040e5 102 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 22-04-2016 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SII_RS08795 5ec936ba858301d19921fc5efc5040e5 102 SMART SM01403 7 101 4.6E-56 T 22-04-2016 IPR027486 Ribosomal protein S10 domain SII_RS08795 5ec936ba858301d19921fc5efc5040e5 102 Gene3D G3DSA:3.30.70.600 3 102 3.5E-43 T 22-04-2016 IPR027486 Ribosomal protein S10 domain SII_RS08795 5ec936ba858301d19921fc5efc5040e5 102 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 26.71 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 SII_RS08795 5ec936ba858301d19921fc5efc5040e5 102 Pfam PF00338 Ribosomal protein S10p/S20e 7 101 6.5E-35 T 22-04-2016 IPR027486 Ribosomal protein S10 domain SII_RS08795 5ec936ba858301d19921fc5efc5040e5 102 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 1.5E-44 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 SII_RS08295 c428b2ef5c9108c6c87dc12b044b7276 658 SUPERFAMILY SSF52922 527 657 1.24E-40 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 SII_RS08295 c428b2ef5c9108c6c87dc12b044b7276 658 PANTHER PTHR11624:SF1 338 657 0.0 T 22-04-2016 SII_RS08295 c428b2ef5c9108c6c87dc12b044b7276 658 PANTHER PTHR11624:SF1 1 302 0.0 T 22-04-2016 SII_RS08295 c428b2ef5c9108c6c87dc12b044b7276 658 ProSitePatterns PS00801 Transketolase signature 1. 10 30 - T 22-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 SII_RS08295 c428b2ef5c9108c6c87dc12b044b7276 658 ProSitePatterns PS00802 Transketolase signature 2. 464 480 - T 22-04-2016 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 SII_RS08295 c428b2ef5c9108c6c87dc12b044b7276 658 Gene3D G3DSA:3.40.50.920 533 657 8.1E-47 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 SII_RS08295 c428b2ef5c9108c6c87dc12b044b7276 658 SMART SM00861 351 522 2.1E-65 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain SII_RS08295 c428b2ef5c9108c6c87dc12b044b7276 658 PANTHER PTHR11624 338 657 0.0 T 22-04-2016 IPR033247 Transketolase family SII_RS08295 c428b2ef5c9108c6c87dc12b044b7276 658 PANTHER PTHR11624 1 302 0.0 T 22-04-2016 IPR033247 Transketolase family SII_RS08295 c428b2ef5c9108c6c87dc12b044b7276 658 Gene3D G3DSA:3.40.50.970 5 321 4.3E-119 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SII_RS08295 c428b2ef5c9108c6c87dc12b044b7276 658 Gene3D G3DSA:3.40.50.970 328 527 2.1E-70 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SII_RS08295 c428b2ef5c9108c6c87dc12b044b7276 658 TIGRFAM TIGR00232 tktlase_bact: transketolase 5 657 1.2E-279 T 22-04-2016 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 SII_RS08295 c428b2ef5c9108c6c87dc12b044b7276 658 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 3 334 1.6E-151 T 22-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 SII_RS08295 c428b2ef5c9108c6c87dc12b044b7276 658 Pfam PF02780 Transketolase, C-terminal domain 543 650 1.2E-15 T 22-04-2016 IPR033248 Transketolase, C-terminal domain SII_RS08295 c428b2ef5c9108c6c87dc12b044b7276 658 SUPERFAMILY SSF52518 4 321 2.95E-111 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SII_RS08295 c428b2ef5c9108c6c87dc12b044b7276 658 Pfam PF02779 Transketolase, pyrimidine binding domain 352 521 1.3E-44 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain SII_RS08295 c428b2ef5c9108c6c87dc12b044b7276 658 SUPERFAMILY SSF52518 342 521 4.32E-62 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SII_RS06490 536f75a83a66502f5bcf9cdc37ea0661 613 Pfam PF14492 Elongation Factor G, domain II 333 382 1.8E-6 T 22-04-2016 IPR009022 Elongation factor G, III-V domain SII_RS06490 536f75a83a66502f5bcf9cdc37ea0661 613 SUPERFAMILY SSF54980 403 518 2.16E-30 T 22-04-2016 IPR009022 Elongation factor G, III-V domain SII_RS06490 536f75a83a66502f5bcf9cdc37ea0661 613 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 8 146 2.3E-24 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 SII_RS06490 536f75a83a66502f5bcf9cdc37ea0661 613 Gene3D G3DSA:2.40.30.10 210 308 4.7E-27 T 22-04-2016 SII_RS06490 536f75a83a66502f5bcf9cdc37ea0661 613 Pfam PF03144 Elongation factor Tu domain 2 224 294 3.9E-14 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 SII_RS06490 536f75a83a66502f5bcf9cdc37ea0661 613 PRINTS PR00315 GTP-binding elongation factor signature 126 135 1.4E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SII_RS06490 536f75a83a66502f5bcf9cdc37ea0661 613 PRINTS PR00315 GTP-binding elongation factor signature 74 84 1.4E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SII_RS06490 536f75a83a66502f5bcf9cdc37ea0661 613 PRINTS PR00315 GTP-binding elongation factor signature 10 23 1.4E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SII_RS06490 536f75a83a66502f5bcf9cdc37ea0661 613 PRINTS PR00315 GTP-binding elongation factor signature 90 101 1.4E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SII_RS06490 536f75a83a66502f5bcf9cdc37ea0661 613 PRINTS PR00315 GTP-binding elongation factor signature 54 62 1.4E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SII_RS06490 536f75a83a66502f5bcf9cdc37ea0661 613 PANTHER PTHR23115:SF14 1 596 1.7E-295 T 22-04-2016 IPR006298 GTP-binding protein TypA GO:0005525 SII_RS06490 536f75a83a66502f5bcf9cdc37ea0661 613 SMART SM00838 400 485 2.9E-6 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain SII_RS06490 536f75a83a66502f5bcf9cdc37ea0661 613 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 47 62 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site SII_RS06490 536f75a83a66502f5bcf9cdc37ea0661 613 SUPERFAMILY SSF50447 155 304 2.5E-33 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain SII_RS06490 536f75a83a66502f5bcf9cdc37ea0661 613 Gene3D G3DSA:3.40.50.300 4 209 5.1E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS06490 536f75a83a66502f5bcf9cdc37ea0661 613 SUPERFAMILY SSF52540 3 212 3.55E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS06490 536f75a83a66502f5bcf9cdc37ea0661 613 PANTHER PTHR23115 1 596 1.7E-295 T 22-04-2016 SII_RS06490 536f75a83a66502f5bcf9cdc37ea0661 613 Pfam PF00679 Elongation factor G C-terminus 402 479 1.2E-24 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain SII_RS06490 536f75a83a66502f5bcf9cdc37ea0661 613 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 8 604 1.9E-294 T 22-04-2016 IPR006298 GTP-binding protein TypA GO:0005525 SII_RS06490 536f75a83a66502f5bcf9cdc37ea0661 613 Pfam PF00009 Elongation factor Tu GTP binding domain 7 200 3.0E-55 T 22-04-2016 SII_RS06490 536f75a83a66502f5bcf9cdc37ea0661 613 Gene3D G3DSA:3.30.70.870 309 404 1.1E-38 T 22-04-2016 SII_RS06490 536f75a83a66502f5bcf9cdc37ea0661 613 Gene3D G3DSA:3.30.70.240 405 480 7.9E-34 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain SII_RS06490 536f75a83a66502f5bcf9cdc37ea0661 613 Gene3D G3DSA:2.40.50.250 488 582 1.7E-39 T 22-04-2016 SII_RS06490 536f75a83a66502f5bcf9cdc37ea0661 613 SUPERFAMILY SSF54980 307 392 1.55E-15 T 22-04-2016 IPR009022 Elongation factor G, III-V domain SII_RS08505 056075030a1b0a9209126f917d8fcf1b 376 Gene3D G3DSA:3.30.70.360 173 290 9.8E-39 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain SII_RS08505 056075030a1b0a9209126f917d8fcf1b 376 SUPERFAMILY SSF53187 291 366 2.27E-65 T 22-04-2016 SII_RS08505 056075030a1b0a9209126f917d8fcf1b 376 SUPERFAMILY SSF53187 4 189 2.27E-65 T 22-04-2016 SII_RS08505 056075030a1b0a9209126f917d8fcf1b 376 PIRSF PIRSF005962 2 376 5.1E-102 T 22-04-2016 IPR017439 Amidohydrolase GO:0016787 SII_RS08505 056075030a1b0a9209126f917d8fcf1b 376 Pfam PF01546 Peptidase family M20/M25/M40 67 370 1.2E-21 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 SII_RS08505 056075030a1b0a9209126f917d8fcf1b 376 Pfam PF07687 Peptidase dimerisation domain 174 269 3.2E-10 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain SII_RS08505 056075030a1b0a9209126f917d8fcf1b 376 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 5 361 6.8E-86 T 22-04-2016 IPR017439 Amidohydrolase GO:0016787 SII_RS08505 056075030a1b0a9209126f917d8fcf1b 376 SUPERFAMILY SSF55031 173 290 1.44E-29 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain SII_RS08505 056075030a1b0a9209126f917d8fcf1b 376 Hamap MF_01692 N-acetyldiaminopimelate deacetylase. 1 373 60.718 T 22-04-2016 IPR023905 Acetyldiaminopimelate deacetylase GO:0009089|GO:0050118 KEGG: 00300+3.5.1.47|MetaCyc: PWY-2941|UniPathway: UPA00034 SII_RS08505 056075030a1b0a9209126f917d8fcf1b 376 Gene3D G3DSA:3.40.630.10 291 368 1.2E-71 T 22-04-2016 SII_RS08505 056075030a1b0a9209126f917d8fcf1b 376 Gene3D G3DSA:3.40.630.10 4 170 1.2E-71 T 22-04-2016 SII_RS08505 056075030a1b0a9209126f917d8fcf1b 376 PANTHER PTHR11014 7 376 1.4E-194 T 22-04-2016 SII_RS08505 056075030a1b0a9209126f917d8fcf1b 376 PANTHER PTHR11014:SF98 7 376 1.4E-194 T 22-04-2016 SII_RS04085 55be0f878550fc827cf049379ecb0ad5 327 SMART SM01240 6 327 8.2E-110 T 22-04-2016 SII_RS04085 55be0f878550fc827cf049379ecb0ad5 327 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 9 311 1.2E-67 T 22-04-2016 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 Reactome: REACT_1698 SII_RS04085 55be0f878550fc827cf049379ecb0ad5 327 Hamap MF_01511 GMP reductase [guaC]. 5 326 62.381 T 22-04-2016 IPR005994 Guanosine monophosphate reductase, type2 GO:0003920|GO:0006163|GO:1902560 KEGG: 00230+1.7.1.7 SII_RS04085 55be0f878550fc827cf049379ecb0ad5 327 PANTHER PTHR11911:SF97 171 316 2.9E-153 T 22-04-2016 SII_RS04085 55be0f878550fc827cf049379ecb0ad5 327 PANTHER PTHR11911:SF97 10 153 2.9E-153 T 22-04-2016 SII_RS04085 55be0f878550fc827cf049379ecb0ad5 327 TIGRFAM TIGR01306 GMP_reduct_2: guanosine monophosphate reductase 7 325 4.1E-195 T 22-04-2016 IPR005994 Guanosine monophosphate reductase, type2 GO:0003920|GO:0006163|GO:1902560 KEGG: 00230+1.7.1.7 SII_RS04085 55be0f878550fc827cf049379ecb0ad5 327 SUPERFAMILY SSF51412 7 316 1.7E-91 T 22-04-2016 SII_RS04085 55be0f878550fc827cf049379ecb0ad5 327 Gene3D G3DSA:3.20.20.70 8 321 7.6E-86 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SII_RS04085 55be0f878550fc827cf049379ecb0ad5 327 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 166 178 - T 22-04-2016 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 Reactome: REACT_1698 SII_RS04085 55be0f878550fc827cf049379ecb0ad5 327 PIRSF PIRSF036500 3 327 4.2E-189 T 22-04-2016 IPR005994 Guanosine monophosphate reductase, type2 GO:0003920|GO:0006163|GO:1902560 KEGG: 00230+1.7.1.7 SII_RS04085 55be0f878550fc827cf049379ecb0ad5 327 PANTHER PTHR11911 171 316 2.9E-153 T 22-04-2016 SII_RS04085 55be0f878550fc827cf049379ecb0ad5 327 PANTHER PTHR11911 10 153 2.9E-153 T 22-04-2016 SII_RS06180 bd595e5d4e4b8b992a9177f83b0d9a3c 659 Pfam PF02687 FtsX-like permease family 65 181 7.4E-11 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 SII_RS06180 bd595e5d4e4b8b992a9177f83b0d9a3c 659 PANTHER PTHR30489 375 656 9.0E-25 T 22-04-2016 SII_RS06180 bd595e5d4e4b8b992a9177f83b0d9a3c 659 PANTHER PTHR30489 7 353 9.0E-25 T 22-04-2016 SII_RS06180 bd595e5d4e4b8b992a9177f83b0d9a3c 659 PIRSF PIRSF018968 4 659 1.4E-59 T 22-04-2016 IPR027022 ABC transporter permease protein, BceB-type GO:0006810 SII_RS04130 4a63bfce32efc2b72c25dae226595dbf 259 Pfam PF06182 ABC-2 family transporter protein 31 256 4.8E-17 T 22-04-2016 IPR010390 Protein of unknown function DUF990 SII_RS04130 4a63bfce32efc2b72c25dae226595dbf 259 PANTHER PTHR36832:SF1 1 259 8.6E-41 T 22-04-2016 SII_RS04130 4a63bfce32efc2b72c25dae226595dbf 259 PANTHER PTHR36832 1 259 8.6E-41 T 22-04-2016 SII_RS07615 54e70be2eeb9097367468e5ae7d702d5 537 TIGRFAM TIGR00337 PyrG: CTP synthase 2 529 2.5E-253 T 22-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 SII_RS07615 54e70be2eeb9097367468e5ae7d702d5 537 Gene3D G3DSA:3.40.50.880 289 535 7.1E-99 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like SII_RS07615 54e70be2eeb9097367468e5ae7d702d5 537 Gene3D G3DSA:3.40.50.300 1 285 1.4E-140 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS07615 54e70be2eeb9097367468e5ae7d702d5 537 SUPERFAMILY SSF52540 3 271 7.82E-125 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS07615 54e70be2eeb9097367468e5ae7d702d5 537 Pfam PF06418 CTP synthase N-terminus 4 268 6.1E-129 T 22-04-2016 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 SII_RS07615 54e70be2eeb9097367468e5ae7d702d5 537 Hamap MF_01227 CTP synthase [pyrG]. 3 534 51.84 T 22-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 SII_RS07615 54e70be2eeb9097367468e5ae7d702d5 537 SUPERFAMILY SSF52317 290 535 1.92E-79 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like SII_RS07615 54e70be2eeb9097367468e5ae7d702d5 537 Pfam PF00117 Glutamine amidotransferase class-I 303 528 3.1E-57 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 SII_RS07615 54e70be2eeb9097367468e5ae7d702d5 537 PANTHER PTHR11550 1 532 0.0 T 22-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 SII_RS03390 1d2c7d432e4288325290d13a7adfefaf 253 Gene3D G3DSA:3.40.50.300 15 252 6.1E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS03390 1d2c7d432e4288325290d13a7adfefaf 253 SUPERFAMILY SSF52540 5 198 6.32E-15 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS03390 1d2c7d432e4288325290d13a7adfefaf 253 Pfam PF06414 Zeta toxin 24 215 7.2E-59 T 22-04-2016 IPR010488 Zeta toxin domain GO:0005524|GO:0016301 SII_RS04200 85574ce70b9c84c4377567e179ae047d 815 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 1 813 29.374 T 22-04-2016 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 SII_RS04200 85574ce70b9c84c4377567e179ae047d 815 PANTHER PTHR10169:SF48 2 774 0.0 T 22-04-2016 SII_RS04200 85574ce70b9c84c4377567e179ae047d 815 PANTHER PTHR10169 2 774 0.0 T 22-04-2016 SII_RS04200 85574ce70b9c84c4377567e179ae047d 815 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 758 803 5.2E-10 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 SII_RS04200 85574ce70b9c84c4377567e179ae047d 815 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 552 601 8.5E-13 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 SII_RS04200 85574ce70b9c84c4377567e179ae047d 815 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 658 704 1.4E-12 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 SII_RS04200 85574ce70b9c84c4377567e179ae047d 815 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 504 547 1.9E-8 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 SII_RS04200 85574ce70b9c84c4377567e179ae047d 815 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 707 755 2.5E-10 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 SII_RS04200 85574ce70b9c84c4377567e179ae047d 815 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 610 654 1.2E-9 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 SII_RS04200 85574ce70b9c84c4377567e179ae047d 815 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 6 804 0.0 T 22-04-2016 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 SII_RS04200 85574ce70b9c84c4377567e179ae047d 815 Gene3D G3DSA:2.120.10.90 494 804 1.3E-123 T 22-04-2016 SII_RS04200 85574ce70b9c84c4377567e179ae047d 815 SUPERFAMILY SSF56719 29 484 4.19E-178 T 22-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 SII_RS04200 85574ce70b9c84c4377567e179ae047d 815 SUPERFAMILY SSF101904 497 814 1.57E-105 T 22-04-2016 SII_RS04200 85574ce70b9c84c4377567e179ae047d 815 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 30 469 2.0E-156 T 22-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 SII_RS04200 85574ce70b9c84c4377567e179ae047d 815 SMART SM00434 9 462 1.6E-282 T 22-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 SII_RS04200 85574ce70b9c84c4377567e179ae047d 815 Gene3D G3DSA:3.90.199.10 32 214 1.6E-82 T 22-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 SII_RS04200 85574ce70b9c84c4377567e179ae047d 815 Gene3D G3DSA:1.10.268.10 360 460 5.4E-38 T 22-04-2016 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 SII_RS04200 85574ce70b9c84c4377567e179ae047d 815 Gene3D G3DSA:3.30.1360.40 234 330 4.2E-36 T 22-04-2016 IPR024946 Arginine repressor C-terminal-like domain SII_RS02000 7b9472fe99895e56fede62105af3c7fc 279 ProSitePatterns PS01050 YjeF C-terminal domain signature 2. 215 225 - T 22-04-2016 IPR017953 Carbohydrate kinase, predicted, conserved site SII_RS02000 7b9472fe99895e56fede62105af3c7fc 279 SUPERFAMILY SSF53613 3 278 6.98E-58 T 22-04-2016 IPR029056 Ribokinase-like SII_RS02000 7b9472fe99895e56fede62105af3c7fc 279 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 5 276 20.368 T 22-04-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 SII_RS02000 7b9472fe99895e56fede62105af3c7fc 279 Pfam PF01256 Carbohydrate kinase 28 273 1.3E-57 T 22-04-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 SII_RS02000 7b9472fe99895e56fede62105af3c7fc 279 PANTHER PTHR12592:SF0 8 277 7.0E-59 T 22-04-2016 SII_RS02000 7b9472fe99895e56fede62105af3c7fc 279 PANTHER PTHR12592 8 277 7.0E-59 T 22-04-2016 SII_RS02000 7b9472fe99895e56fede62105af3c7fc 279 Gene3D G3DSA:3.40.1190.20 5 277 7.6E-70 T 22-04-2016 IPR029056 Ribokinase-like SII_RS02000 7b9472fe99895e56fede62105af3c7fc 279 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 10 277 7.4E-51 T 22-04-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 SII_RS02865 b7321a4e22cf04d552b3342400014ff6 495 PANTHER PTHR23429:SF0 1 486 4.5E-203 T 22-04-2016 SII_RS02865 b7321a4e22cf04d552b3342400014ff6 495 Gene3D G3DSA:3.40.50.720 3 185 1.2E-65 T 22-04-2016 IPR016040 NAD(P)-binding domain SII_RS02865 b7321a4e22cf04d552b3342400014ff6 495 PANTHER PTHR23429 1 486 4.5E-203 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 SII_RS02865 b7321a4e22cf04d552b3342400014ff6 495 Gene3D G3DSA:3.30.360.10 186 480 4.9E-110 T 22-04-2016 SII_RS02865 b7321a4e22cf04d552b3342400014ff6 495 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 4 482 84.543 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 SII_RS02865 b7321a4e22cf04d552b3342400014ff6 495 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 218 235 1.6E-44 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 SII_RS02865 b7321a4e22cf04d552b3342400014ff6 495 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 236 252 1.6E-44 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 SII_RS02865 b7321a4e22cf04d552b3342400014ff6 495 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 142 155 1.6E-44 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 SII_RS02865 b7321a4e22cf04d552b3342400014ff6 495 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 327 353 1.6E-44 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 SII_RS02865 b7321a4e22cf04d552b3342400014ff6 495 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 166 194 1.6E-44 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 SII_RS02865 b7321a4e22cf04d552b3342400014ff6 495 SUPERFAMILY SSF51735 4 189 1.79E-56 T 22-04-2016 IPR016040 NAD(P)-binding domain SII_RS02865 b7321a4e22cf04d552b3342400014ff6 495 ProSitePatterns PS00069 Glucose-6-phosphate dehydrogenase active site. 176 182 - T 22-04-2016 IPR019796 Glucose-6-phosphate dehydrogenase, active site GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 SII_RS02865 b7321a4e22cf04d552b3342400014ff6 495 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 189 480 5.3E-101 T 22-04-2016 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 SII_RS02865 b7321a4e22cf04d552b3342400014ff6 495 SUPERFAMILY SSF55347 176 483 7.19E-104 T 22-04-2016 SII_RS02865 b7321a4e22cf04d552b3342400014ff6 495 PIRSF PIRSF000110 1 484 8.2E-181 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 SII_RS02865 b7321a4e22cf04d552b3342400014ff6 495 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 9 185 1.4E-57 T 22-04-2016 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 SII_RS02865 b7321a4e22cf04d552b3342400014ff6 495 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 4 481 2.7E-168 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 SII_RS05320 f21cbeb5d7a102c41353ed4827916f5a 156 Gene3D G3DSA:1.10.1740.10 18 65 9.0E-10 T 22-04-2016 SII_RS05320 f21cbeb5d7a102c41353ed4827916f5a 156 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 15 145 1.6E-16 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SII_RS05320 f21cbeb5d7a102c41353ed4827916f5a 156 Pfam PF04542 Sigma-70 region 2 6 65 1.9E-7 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SII_RS05320 f21cbeb5d7a102c41353ed4827916f5a 156 SUPERFAMILY SSF88659 90 150 2.62E-15 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SII_RS05320 f21cbeb5d7a102c41353ed4827916f5a 156 PANTHER PTHR30173 20 148 2.2E-20 T 22-04-2016 SII_RS05320 f21cbeb5d7a102c41353ed4827916f5a 156 SUPERFAMILY SSF88946 8 73 2.67E-9 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SII_RS05320 f21cbeb5d7a102c41353ed4827916f5a 156 Gene3D G3DSA:1.10.10.10 89 148 2.6E-14 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SII_RS05320 f21cbeb5d7a102c41353ed4827916f5a 156 Pfam PF08281 Sigma-70, region 4 92 142 1.3E-11 T 22-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SII_RS03845 f1a802ba05d4dcb45e13994ca9759df8 79 PANTHER PTHR34654 2 78 7.7E-25 T 22-04-2016 SII_RS03845 f1a802ba05d4dcb45e13994ca9759df8 79 SUPERFAMILY SSF54814 11 61 6.41E-5 T 22-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 SII_RS03845 f1a802ba05d4dcb45e13994ca9759df8 79 Hamap MF_00088 UPF0109 protein . 4 77 16.037 T 22-04-2016 IPR020627 Uncharacterised protein family UPF0109 SII_RS03845 f1a802ba05d4dcb45e13994ca9759df8 79 Pfam PF13083 KH domain 5 75 6.0E-18 T 22-04-2016 SII_RS03845 f1a802ba05d4dcb45e13994ca9759df8 79 Gene3D G3DSA:3.30.300.120 8 77 4.7E-10 T 22-04-2016 SII_RS00055 9ea2856b8a346bb755e3e99a639d78e6 425 SMART SM00977 348 415 9.3E-15 T 22-04-2016 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 SII_RS00055 9ea2856b8a346bb755e3e99a639d78e6 425 SUPERFAMILY SSF56037 346 420 1.02E-10 T 22-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 SII_RS00055 9ea2856b8a346bb755e3e99a639d78e6 425 PANTHER PTHR11807:SF2 1 425 4.7E-67 T 22-04-2016 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 SII_RS00055 9ea2856b8a346bb755e3e99a639d78e6 425 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 21 194 1.7E-51 T 22-04-2016 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 SII_RS00055 9ea2856b8a346bb755e3e99a639d78e6 425 Gene3D G3DSA:3.40.50.620 9 123 1.1E-23 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SII_RS00055 9ea2856b8a346bb755e3e99a639d78e6 425 Gene3D G3DSA:3.40.50.620 168 218 1.1E-23 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SII_RS00055 9ea2856b8a346bb755e3e99a639d78e6 425 TIGRFAM TIGR02433 lysidine_TilS_C: tRNA(Ile)-lysidine synthetase, C-terminal domain 348 392 1.5E-9 T 22-04-2016 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 SII_RS00055 9ea2856b8a346bb755e3e99a639d78e6 425 SUPERFAMILY SSF52402 8 217 4.38E-52 T 22-04-2016 SII_RS00055 9ea2856b8a346bb755e3e99a639d78e6 425 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 7 290 22.073 T 22-04-2016 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 SII_RS00055 9ea2856b8a346bb755e3e99a639d78e6 425 Pfam PF01171 PP-loop family 21 190 1.9E-52 T 22-04-2016 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal SII_RS00055 9ea2856b8a346bb755e3e99a639d78e6 425 Pfam PF11734 TilS substrate C-terminal domain 350 413 2.8E-8 T 22-04-2016 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 SII_RS00055 9ea2856b8a346bb755e3e99a639d78e6 425 PANTHER PTHR11807 1 425 4.7E-67 T 22-04-2016 SII_RS06400 9cc7682fae6f6f5418ee428b15a949c7 547 Pfam PF00128 Alpha amylase, catalytic domain 26 364 1.7E-102 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 SII_RS06400 9cc7682fae6f6f5418ee428b15a949c7 547 SUPERFAMILY SSF51011 466 539 4.18E-17 T 22-04-2016 SII_RS06400 9cc7682fae6f6f5418ee428b15a949c7 547 PANTHER PTHR10357:SF170 442 547 9.3E-275 T 22-04-2016 SII_RS06400 9cc7682fae6f6f5418ee428b15a949c7 547 PANTHER PTHR10357:SF170 5 412 9.3E-275 T 22-04-2016 SII_RS06400 9cc7682fae6f6f5418ee428b15a949c7 547 SMART SM00642 11 407 2.6E-121 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 SII_RS06400 9cc7682fae6f6f5418ee428b15a949c7 547 PANTHER PTHR10357 442 547 9.3E-275 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 SII_RS06400 9cc7682fae6f6f5418ee428b15a949c7 547 PANTHER PTHR10357 5 412 9.3E-275 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 SII_RS06400 9cc7682fae6f6f5418ee428b15a949c7 547 Gene3D G3DSA:3.20.20.80 6 101 5.5E-110 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 SII_RS06400 9cc7682fae6f6f5418ee428b15a949c7 547 Gene3D G3DSA:3.20.20.80 167 464 5.5E-110 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 SII_RS06400 9cc7682fae6f6f5418ee428b15a949c7 547 Gene3D G3DSA:3.90.400.10 102 163 2.5E-24 T 22-04-2016 SII_RS06400 9cc7682fae6f6f5418ee428b15a949c7 547 Gene3D G3DSA:2.60.40.1180 468 540 6.8E-21 T 22-04-2016 IPR013780 Glycosyl hydrolase, all-beta SII_RS06400 9cc7682fae6f6f5418ee428b15a949c7 547 Pfam PF16657 Maltogenic Amylase, C-terminal domain 466 517 2.3E-6 T 22-04-2016 IPR032091 Maltogenic Amylase, C-terminal SII_RS06400 9cc7682fae6f6f5418ee428b15a949c7 547 SUPERFAMILY SSF51445 6 463 1.2E-134 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily SII_RS06400 9cc7682fae6f6f5418ee428b15a949c7 547 TIGRFAM TIGR02403 trehalose_treC: alpha,alpha-phosphotrehalase 5 538 3.2E-252 T 22-04-2016 IPR012769 Trehalose-6-phosphate hydrolase GO:0005737|GO:0005993|GO:0008788 KEGG: 00500+3.2.1.93 SII_RS01380 9ddcdb278c4cf637f5728884aec62607 535 SMART SM00642 13 402 2.0E-149 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 SII_RS01380 9ddcdb278c4cf637f5728884aec62607 535 SUPERFAMILY SSF51445 3 460 4.93E-147 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily SII_RS01380 9ddcdb278c4cf637f5728884aec62607 535 Pfam PF00128 Alpha amylase, catalytic domain 28 359 1.1E-122 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 SII_RS01380 9ddcdb278c4cf637f5728884aec62607 535 PANTHER PTHR10357 1 379 5.8E-233 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 SII_RS01380 9ddcdb278c4cf637f5728884aec62607 535 PANTHER PTHR10357 439 513 5.8E-233 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 SII_RS01380 9ddcdb278c4cf637f5728884aec62607 535 PANTHER PTHR10357 395 407 5.8E-233 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 SII_RS01380 9ddcdb278c4cf637f5728884aec62607 535 Pfam PF16657 Maltogenic Amylase, C-terminal domain 464 507 1.0E-6 T 22-04-2016 IPR032091 Maltogenic Amylase, C-terminal SII_RS01380 9ddcdb278c4cf637f5728884aec62607 535 SUPERFAMILY SSF51011 464 534 5.54E-11 T 22-04-2016 SII_RS01380 9ddcdb278c4cf637f5728884aec62607 535 Gene3D G3DSA:3.20.20.80 2 104 2.0E-118 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 SII_RS01380 9ddcdb278c4cf637f5728884aec62607 535 Gene3D G3DSA:3.20.20.80 170 461 2.0E-118 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 SII_RS01380 9ddcdb278c4cf637f5728884aec62607 535 Gene3D G3DSA:2.60.40.1180 467 534 2.0E-13 T 22-04-2016 IPR013780 Glycosyl hydrolase, all-beta SII_RS01380 9ddcdb278c4cf637f5728884aec62607 535 PANTHER PTHR10357:SF142 1 379 5.8E-233 T 22-04-2016 SII_RS01380 9ddcdb278c4cf637f5728884aec62607 535 PANTHER PTHR10357:SF142 439 513 5.8E-233 T 22-04-2016 SII_RS01380 9ddcdb278c4cf637f5728884aec62607 535 PANTHER PTHR10357:SF142 395 407 5.8E-233 T 22-04-2016 SII_RS01380 9ddcdb278c4cf637f5728884aec62607 535 Gene3D G3DSA:3.90.400.10 105 169 2.5E-27 T 22-04-2016 SII_RS00390 d51c29af1fd009e0f33359b663c1da5d 188 PANTHER PTHR39166 1 188 7.2E-57 T 22-04-2016 SII_RS00390 d51c29af1fd009e0f33359b663c1da5d 188 Pfam PF06042 Nucleotidyltransferase 25 185 3.9E-58 T 22-04-2016 IPR009267 Putative nucleotidyltransferase SII_RS06710 646a4ee5e2389d935884efb127a7108f 311 SUPERFAMILY SSF53328 3 203 8.63E-61 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SII_RS06710 646a4ee5e2389d935884efb127a7108f 311 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 3 301 3.8E-93 T 22-04-2016 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SII_RS06710 646a4ee5e2389d935884efb127a7108f 311 PANTHER PTHR11138 3 299 8.7E-104 T 22-04-2016 SII_RS06710 646a4ee5e2389d935884efb127a7108f 311 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 2 302 33.711 T 22-04-2016 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SII_RS06710 646a4ee5e2389d935884efb127a7108f 311 SUPERFAMILY SSF50486 207 303 5.18E-30 T 22-04-2016 IPR011034 Formyl transferase, C-terminal-like GO:0003824 SII_RS06710 646a4ee5e2389d935884efb127a7108f 311 Pfam PF00551 Formyl transferase 3 180 2.7E-37 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SII_RS06710 646a4ee5e2389d935884efb127a7108f 311 Pfam PF02911 Formyl transferase, C-terminal domain 205 299 4.7E-28 T 22-04-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SII_RS06710 646a4ee5e2389d935884efb127a7108f 311 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 133 156 - T 22-04-2016 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SII_RS06710 646a4ee5e2389d935884efb127a7108f 311 Gene3D G3DSA:3.10.25.10 208 309 1.7E-31 T 22-04-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SII_RS06710 646a4ee5e2389d935884efb127a7108f 311 Gene3D G3DSA:3.40.50.170 3 205 8.8E-64 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SII_RS02525 fbc666c99a87620144c394e762d1ee49 621 SMART SM00382 28 229 9.3E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain SII_RS02525 fbc666c99a87620144c394e762d1ee49 621 SMART SM00382 341 520 1.7E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain SII_RS02525 fbc666c99a87620144c394e762d1ee49 621 Gene3D G3DSA:3.40.50.300 317 553 8.6E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS02525 fbc666c99a87620144c394e762d1ee49 621 Pfam PF12848 ABC transporter 223 291 1.1E-10 T 22-04-2016 IPR032781 ABC-transporter extension domain SII_RS02525 fbc666c99a87620144c394e762d1ee49 621 SUPERFAMILY SSF52540 309 523 1.62E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS02525 fbc666c99a87620144c394e762d1ee49 621 Pfam PF16326 ABC transporter C-terminal domain 553 618 1.6E-15 T 22-04-2016 IPR032524 ABC transporter Uup, C-terminal GO:0003677 SII_RS02525 fbc666c99a87620144c394e762d1ee49 621 PANTHER PTHR19211 1 523 7.0E-187 T 22-04-2016 SII_RS02525 fbc666c99a87620144c394e762d1ee49 621 PANTHER PTHR19211 580 617 7.0E-187 T 22-04-2016 SII_RS02525 fbc666c99a87620144c394e762d1ee49 621 Pfam PF00005 ABC transporter 20 184 9.8E-23 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SII_RS02525 fbc666c99a87620144c394e762d1ee49 621 Pfam PF00005 ABC transporter 333 466 1.5E-20 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SII_RS02525 fbc666c99a87620144c394e762d1ee49 621 Gene3D G3DSA:3.40.50.300 6 93 2.8E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS02525 fbc666c99a87620144c394e762d1ee49 621 Gene3D G3DSA:3.40.50.300 143 250 2.8E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS02525 fbc666c99a87620144c394e762d1ee49 621 SUPERFAMILY SSF52540 6 238 1.22E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS02525 fbc666c99a87620144c394e762d1ee49 621 Gene3D G3DSA:3.40.50.300 120 142 3.2E-6 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS02995 0db804989e95f12e07ccf221ec9eff8b 216 Pfam PF12710 haloacid dehalogenase-like hydrolase 8 173 1.0E-21 T 22-04-2016 SII_RS02995 0db804989e95f12e07ccf221ec9eff8b 216 PANTHER PTHR10000 1 215 2.4E-79 T 22-04-2016 SII_RS02995 0db804989e95f12e07ccf221ec9eff8b 216 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 6 175 3.1E-35 T 22-04-2016 IPR006383 HAD-superfamily hydrolase, subfamily IB, PSPase-like GO:0008152|GO:0016791 SII_RS02995 0db804989e95f12e07ccf221ec9eff8b 216 Gene3D G3DSA:1.10.150.210 17 67 7.8E-23 T 22-04-2016 IPR023190 Phosphoserine phosphatase, domain 2 GO:0004647|GO:0006564 KEGG: 00260+3.1.3.3|KEGG: 00680+3.1.3.3|UniPathway: UPA00135 SII_RS02995 0db804989e95f12e07ccf221ec9eff8b 216 PANTHER PTHR10000:SF7 1 215 2.4E-79 T 22-04-2016 SII_RS02995 0db804989e95f12e07ccf221ec9eff8b 216 SUPERFAMILY SSF56784 4 212 8.14E-48 T 22-04-2016 IPR023214 HAD-like domain SII_RS02995 0db804989e95f12e07ccf221ec9eff8b 216 TIGRFAM TIGR00338 serB: phosphoserine phosphatase SerB 3 209 1.5E-76 T 22-04-2016 SII_RS02995 0db804989e95f12e07ccf221ec9eff8b 216 Gene3D G3DSA:3.40.50.1000 68 200 2.7E-46 T 22-04-2016 IPR023214 HAD-like domain SII_RS00680 71ab58d313e41bac0296343fb3c1c281 809 SMART SM01086 717 806 2.7E-34 T 22-04-2016 IPR019489 Clp ATPase, C-terminal SII_RS00680 71ab58d313e41bac0296343fb3c1c281 809 SUPERFAMILY SSF81923 2 133 1.86E-14 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 SII_RS00680 71ab58d313e41bac0296343fb3c1c281 809 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 322 334 - T 22-04-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 SII_RS00680 71ab58d313e41bac0296343fb3c1c281 809 Pfam PF07724 AAA domain (Cdc48 subfamily) 539 710 8.1E-54 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 SII_RS00680 71ab58d313e41bac0296343fb3c1c281 809 Gene3D G3DSA:1.10.8.60 372 439 5.1E-26 T 22-04-2016 SII_RS00680 71ab58d313e41bac0296343fb3c1c281 809 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 231 349 5.5E-12 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 SII_RS00680 71ab58d313e41bac0296343fb3c1c281 809 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 14 60 0.23 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 SII_RS00680 71ab58d313e41bac0296343fb3c1c281 809 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 91 133 4.7E-5 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 SII_RS00680 71ab58d313e41bac0296343fb3c1c281 809 Gene3D G3DSA:3.40.50.300 189 370 2.4E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS00680 71ab58d313e41bac0296343fb3c1c281 809 SUPERFAMILY SSF52540 189 434 1.13E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS00680 71ab58d313e41bac0296343fb3c1c281 809 SUPERFAMILY SSF52540 489 796 7.86E-77 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS00680 71ab58d313e41bac0296343fb3c1c281 809 PANTHER PTHR11638 2 139 0.0 T 22-04-2016 SII_RS00680 71ab58d313e41bac0296343fb3c1c281 809 PANTHER PTHR11638 177 808 0.0 T 22-04-2016 SII_RS00680 71ab58d313e41bac0296343fb3c1c281 809 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 574 592 - T 22-04-2016 IPR028299 ClpA/B, conserved site 2 SII_RS00680 71ab58d313e41bac0296343fb3c1c281 809 SMART SM00382 540 689 4.7E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain SII_RS00680 71ab58d313e41bac0296343fb3c1c281 809 SMART SM00382 226 371 2.8E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain SII_RS00680 71ab58d313e41bac0296343fb3c1c281 809 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 717 797 2.5E-24 T 22-04-2016 IPR019489 Clp ATPase, C-terminal SII_RS00680 71ab58d313e41bac0296343fb3c1c281 809 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 618 636 3.9E-42 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 SII_RS00680 71ab58d313e41bac0296343fb3c1c281 809 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 544 562 3.9E-42 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 SII_RS00680 71ab58d313e41bac0296343fb3c1c281 809 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 651 665 3.9E-42 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 SII_RS00680 71ab58d313e41bac0296343fb3c1c281 809 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 589 607 3.9E-42 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 SII_RS00680 71ab58d313e41bac0296343fb3c1c281 809 Gene3D G3DSA:3.40.50.300 493 666 3.3E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS00680 71ab58d313e41bac0296343fb3c1c281 809 Gene3D G3DSA:3.40.50.300 700 727 3.3E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS00680 71ab58d313e41bac0296343fb3c1c281 809 PANTHER PTHR11638:SF18 2 139 0.0 T 22-04-2016 SII_RS00680 71ab58d313e41bac0296343fb3c1c281 809 PANTHER PTHR11638:SF18 177 808 0.0 T 22-04-2016 SII_RS00680 71ab58d313e41bac0296343fb3c1c281 809 Gene3D G3DSA:1.10.8.60 728 807 1.8E-29 T 22-04-2016 SII_RS00680 71ab58d313e41bac0296343fb3c1c281 809 Gene3D G3DSA:1.10.1780.10 2 135 8.1E-20 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 SII_RS04125 1f99318192b89c28163e87af28f7961f 327 Gene3D G3DSA:3.40.50.300 19 259 9.0E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS04125 1f99318192b89c28163e87af28f7961f 327 SUPERFAMILY SSF52540 27 261 7.83E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS04125 1f99318192b89c28163e87af28f7961f 327 Pfam PF00005 ABC transporter 39 182 9.0E-27 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SII_RS04125 1f99318192b89c28163e87af28f7961f 327 PANTHER PTHR24220 3 17 1.6E-91 T 22-04-2016 SII_RS04125 1f99318192b89c28163e87af28f7961f 327 PANTHER PTHR24220 35 261 1.6E-91 T 22-04-2016 SII_RS04125 1f99318192b89c28163e87af28f7961f 327 PANTHER PTHR24220 285 327 1.6E-91 T 22-04-2016 SII_RS04125 1f99318192b89c28163e87af28f7961f 327 PANTHER PTHR24220:SF333 3 17 1.6E-91 T 22-04-2016 SII_RS04125 1f99318192b89c28163e87af28f7961f 327 PANTHER PTHR24220:SF333 35 261 1.6E-91 T 22-04-2016 SII_RS04125 1f99318192b89c28163e87af28f7961f 327 PANTHER PTHR24220:SF333 285 327 1.6E-91 T 22-04-2016 SII_RS04125 1f99318192b89c28163e87af28f7961f 327 SMART SM00382 47 231 1.2E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain SII_RS05385 c32f853be8d9da6801aeca587b46e20e 577 Gene3D G3DSA:3.20.20.60 259 573 1.3E-112 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 SII_RS05385 c32f853be8d9da6801aeca587b46e20e 577 PANTHER PTHR22931 13 29 1.8E-202 T 22-04-2016 SII_RS05385 c32f853be8d9da6801aeca587b46e20e 577 PANTHER PTHR22931 50 554 1.8E-202 T 22-04-2016 SII_RS05385 c32f853be8d9da6801aeca587b46e20e 577 PIRSF PIRSF000732 1 576 3.9E-209 T 22-04-2016 IPR024692 Phosphotransferase system, enzyme I GO:0008965|GO:0009401 SII_RS05385 c32f853be8d9da6801aeca587b46e20e 577 Gene3D G3DSA:1.10.274.10 24 134 3.9E-41 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 SII_RS05385 c32f853be8d9da6801aeca587b46e20e 577 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 186 197 - T 22-04-2016 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 SII_RS05385 c32f853be8d9da6801aeca587b46e20e 577 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 5 569 6.3E-227 T 22-04-2016 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 SII_RS05385 c32f853be8d9da6801aeca587b46e20e 577 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 253 545 1.2E-128 T 22-04-2016 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 SII_RS05385 c32f853be8d9da6801aeca587b46e20e 577 Gene3D G3DSA:3.50.30.10 135 258 1.2E-41 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 SII_RS05385 c32f853be8d9da6801aeca587b46e20e 577 SUPERFAMILY SSF51621 252 553 8.11E-109 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 SII_RS05385 c32f853be8d9da6801aeca587b46e20e 577 Pfam PF05524 PEP-utilising enzyme, N-terminal 6 128 4.8E-32 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 SII_RS05385 c32f853be8d9da6801aeca587b46e20e 577 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 451 469 - T 22-04-2016 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 SII_RS05385 c32f853be8d9da6801aeca587b46e20e 577 SUPERFAMILY SSF52009 127 244 3.01E-35 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 SII_RS05385 c32f853be8d9da6801aeca587b46e20e 577 SUPERFAMILY SSF47831 24 145 1.29E-35 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 SII_RS05385 c32f853be8d9da6801aeca587b46e20e 577 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 468 483 1.3E-32 T 22-04-2016 SII_RS05385 c32f853be8d9da6801aeca587b46e20e 577 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 451 466 1.3E-32 T 22-04-2016 SII_RS05385 c32f853be8d9da6801aeca587b46e20e 577 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 295 314 1.3E-32 T 22-04-2016 SII_RS05385 c32f853be8d9da6801aeca587b46e20e 577 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 504 516 1.3E-32 T 22-04-2016 SII_RS05385 c32f853be8d9da6801aeca587b46e20e 577 Pfam PF00391 PEP-utilising enzyme, mobile domain 155 227 1.4E-20 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 SII_RS09465 000926271616a4a02e48949a62046a88 126 Pfam PF13275 S4 domain 4 66 1.6E-24 T 22-04-2016 SII_RS09465 000926271616a4a02e48949a62046a88 126 Gene3D G3DSA:3.10.290.10 2 66 3.6E-22 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SII_RS09465 000926271616a4a02e48949a62046a88 126 PANTHER PTHR32319 4 97 3.1E-32 T 22-04-2016 SII_RS09465 000926271616a4a02e48949a62046a88 126 PANTHER PTHR32319:SF3 4 97 3.1E-32 T 22-04-2016 SII_RS09465 000926271616a4a02e48949a62046a88 126 SUPERFAMILY SSF55174 2 66 6.67E-17 T 22-04-2016 SII_RS09465 000926271616a4a02e48949a62046a88 126 TIGRFAM TIGR02988 YaaA_near_RecF: S4 domain protein YaaA 2 61 1.2E-27 T 22-04-2016 IPR014330 RNA-binding S4-related,YaaA SII_RS06990 e2be79e7df7c7d24f43b9e3e1623f072 105 TIGRFAM TIGR02209 ftsL_broad: cell division protein FtsL 23 104 6.6E-17 T 22-04-2016 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 SII_RS06990 e2be79e7df7c7d24f43b9e3e1623f072 105 PANTHER PTHR41300 1 105 6.1E-20 T 22-04-2016 SII_RS06990 e2be79e7df7c7d24f43b9e3e1623f072 105 Hamap MF_00910 Cell division protein FtsL [ftsL]. 21 105 12.9 T 22-04-2016 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 SII_RS06990 e2be79e7df7c7d24f43b9e3e1623f072 105 PANTHER PTHR41300:SF1 1 105 6.1E-20 T 22-04-2016 SII_RS03925 86d972fa11d7fbcd0f759cacf9c98539 694 Hamap MF_00952 DNA topoisomerase 1 [topA]. 13 635 55.811 T 22-04-2016 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 SII_RS03925 86d972fa11d7fbcd0f759cacf9c98539 694 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 15 613 1.1E-246 T 22-04-2016 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 SII_RS03925 86d972fa11d7fbcd0f759cacf9c98539 694 PANTHER PTHR11390 11 685 0.0 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 SII_RS03925 86d972fa11d7fbcd0f759cacf9c98539 694 SMART SM00437 252 512 2.4E-109 T 22-04-2016 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 SII_RS03925 86d972fa11d7fbcd0f759cacf9c98539 694 SUPERFAMILY SSF57783 575 615 4.08E-13 T 22-04-2016 SII_RS03925 86d972fa11d7fbcd0f759cacf9c98539 694 Gene3D G3DSA:3.40.50.140 12 144 6.9E-46 T 22-04-2016 IPR006171 Toprim domain SII_RS03925 86d972fa11d7fbcd0f759cacf9c98539 694 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 289 311 - T 22-04-2016 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 SII_RS03925 86d972fa11d7fbcd0f759cacf9c98539 694 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 660 685 0.016 T 22-04-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 SII_RS03925 86d972fa11d7fbcd0f759cacf9c98539 694 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 619 657 6.3E-14 T 22-04-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 SII_RS03925 86d972fa11d7fbcd0f759cacf9c98539 694 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 580 614 3.1E-14 T 22-04-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 SII_RS03925 86d972fa11d7fbcd0f759cacf9c98539 694 SMART SM00493 13 113 9.6E-28 T 22-04-2016 IPR006171 Toprim domain SII_RS03925 86d972fa11d7fbcd0f759cacf9c98539 694 Pfam PF01751 Toprim domain 15 123 5.3E-30 T 22-04-2016 IPR006171 Toprim domain SII_RS03925 86d972fa11d7fbcd0f759cacf9c98539 694 SMART SM00436 114 202 6.3E-53 T 22-04-2016 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 SII_RS03925 86d972fa11d7fbcd0f759cacf9c98539 694 SUPERFAMILY SSF56712 13 591 6.93E-194 T 22-04-2016 IPR023405 DNA topoisomerase, type IA, core domain SII_RS03925 86d972fa11d7fbcd0f759cacf9c98539 694 Gene3D G3DSA:3.30.65.10 567 624 1.0E-19 T 22-04-2016 SII_RS03925 86d972fa11d7fbcd0f759cacf9c98539 694 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 172 190 9.1E-37 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 SII_RS03925 86d972fa11d7fbcd0f759cacf9c98539 694 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 378 394 9.1E-37 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 SII_RS03925 86d972fa11d7fbcd0f759cacf9c98539 694 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 475 489 9.1E-37 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 SII_RS03925 86d972fa11d7fbcd0f759cacf9c98539 694 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 87 100 9.1E-37 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 SII_RS03925 86d972fa11d7fbcd0f759cacf9c98539 694 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 302 311 9.1E-37 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 SII_RS03925 86d972fa11d7fbcd0f759cacf9c98539 694 Gene3D G3DSA:2.70.20.10 325 458 8.2E-33 T 22-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 SII_RS03925 86d972fa11d7fbcd0f759cacf9c98539 694 Gene3D G3DSA:2.70.20.10 194 323 4.9E-31 T 22-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 SII_RS03925 86d972fa11d7fbcd0f759cacf9c98539 694 Gene3D G3DSA:1.10.460.10 660 666 3.7E-60 T 22-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 SII_RS03925 86d972fa11d7fbcd0f759cacf9c98539 694 Gene3D G3DSA:1.10.460.10 145 192 3.7E-60 T 22-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 SII_RS03925 86d972fa11d7fbcd0f759cacf9c98539 694 Gene3D G3DSA:1.10.460.10 459 563 3.7E-60 T 22-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 SII_RS03925 86d972fa11d7fbcd0f759cacf9c98539 694 PANTHER PTHR11390:SF27 11 685 0.0 T 22-04-2016 SII_RS03925 86d972fa11d7fbcd0f759cacf9c98539 694 Pfam PF01131 DNA topoisomerase 138 550 1.2E-131 T 22-04-2016 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 SII_RS02790 6d7af08f125247c213b6896986efb706 223 Pfam PF04607 Region found in RelA / SpoT proteins 44 163 2.1E-37 T 22-04-2016 IPR007685 RelA/SpoT GO:0015969 SII_RS02790 6d7af08f125247c213b6896986efb706 223 SUPERFAMILY SSF81301 1 198 2.29E-60 T 22-04-2016 SII_RS02790 6d7af08f125247c213b6896986efb706 223 Gene3D G3DSA:3.30.460.10 2 145 2.2E-41 T 22-04-2016 SII_RS02790 6d7af08f125247c213b6896986efb706 223 Gene3D G3DSA:1.10.287.860 148 202 2.1E-25 T 22-04-2016 SII_RS02790 6d7af08f125247c213b6896986efb706 223 PANTHER PTHR21262:SF11 1 203 2.6E-121 T 22-04-2016 SII_RS02790 6d7af08f125247c213b6896986efb706 223 SMART SM00954 44 165 6.7E-44 T 22-04-2016 IPR007685 RelA/SpoT GO:0015969 SII_RS02790 6d7af08f125247c213b6896986efb706 223 PANTHER PTHR21262 1 203 2.6E-121 T 22-04-2016 SII_RS02620 f5a0ec0eeda95d815c26b4cab859a850 336 Gene3D G3DSA:3.40.50.450 1 214 6.4E-76 T 22-04-2016 SII_RS02620 f5a0ec0eeda95d815c26b4cab859a850 336 PIRSF PIRSF000532 1 323 3.4E-118 T 22-04-2016 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type GO:0005524|GO:0006002|GO:0006096|GO:0008443 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|UniPathway: UPA00109 SII_RS02620 f5a0ec0eeda95d815c26b4cab859a850 336 Hamap MF_00339 ATP-dependent 6-phosphofructokinase [pfkA]. 1 335 47.913 T 22-04-2016 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|UniPathway: UPA00109 SII_RS02620 f5a0ec0eeda95d815c26b4cab859a850 336 SUPERFAMILY SSF53784 1 301 3.66E-109 T 22-04-2016 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 SII_RS02620 f5a0ec0eeda95d815c26b4cab859a850 336 ProSitePatterns PS00433 Phosphofructokinase signature. 244 262 - T 22-04-2016 IPR015912 Phosphofructokinase, conserved site GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 SII_RS02620 f5a0ec0eeda95d815c26b4cab859a850 336 PANTHER PTHR13697:SF4 1 298 4.1E-134 T 22-04-2016 SII_RS02620 f5a0ec0eeda95d815c26b4cab859a850 336 PANTHER PTHR13697 1 298 4.1E-134 T 22-04-2016 SII_RS02620 f5a0ec0eeda95d815c26b4cab859a850 336 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 138 156 2.1E-86 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 SII_RS02620 f5a0ec0eeda95d815c26b4cab859a850 336 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 212 224 2.1E-86 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 SII_RS02620 f5a0ec0eeda95d815c26b4cab859a850 336 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 31 44 2.1E-86 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 SII_RS02620 f5a0ec0eeda95d815c26b4cab859a850 336 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 240 262 2.1E-86 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 SII_RS02620 f5a0ec0eeda95d815c26b4cab859a850 336 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 93 109 2.1E-86 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 SII_RS02620 f5a0ec0eeda95d815c26b4cab859a850 336 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 158 174 2.1E-86 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 SII_RS02620 f5a0ec0eeda95d815c26b4cab859a850 336 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 120 137 2.1E-86 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 SII_RS02620 f5a0ec0eeda95d815c26b4cab859a850 336 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 6 25 2.1E-86 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 SII_RS02620 f5a0ec0eeda95d815c26b4cab859a850 336 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 176 193 2.1E-86 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 SII_RS02620 f5a0ec0eeda95d815c26b4cab859a850 336 TIGRFAM TIGR02482 PFKA_ATP: 6-phosphofructokinase 3 298 5.0E-126 T 22-04-2016 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|UniPathway: UPA00109 SII_RS02620 f5a0ec0eeda95d815c26b4cab859a850 336 Pfam PF00365 Phosphofructokinase 3 276 2.3E-107 T 22-04-2016 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 SII_RS06050 57904d69080a89fcb57036c18fef350e 271 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 80 262 1.6E-51 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 SII_RS06050 57904d69080a89fcb57036c18fef350e 271 SUPERFAMILY SSF50891 80 266 7.74E-55 T 22-04-2016 IPR029000 Cyclophilin-like domain SII_RS06050 57904d69080a89fcb57036c18fef350e 271 PANTHER PTHR11071 82 190 6.9E-81 T 22-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 SII_RS06050 57904d69080a89fcb57036c18fef350e 271 PANTHER PTHR11071 213 268 6.9E-81 T 22-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 SII_RS06050 57904d69080a89fcb57036c18fef350e 271 PANTHER PTHR11071:SF282 82 190 6.9E-81 T 22-04-2016 SII_RS06050 57904d69080a89fcb57036c18fef350e 271 PANTHER PTHR11071:SF282 213 268 6.9E-81 T 22-04-2016 SII_RS06050 57904d69080a89fcb57036c18fef350e 271 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 119 131 1.6E-8 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 SII_RS06050 57904d69080a89fcb57036c18fef350e 271 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 93 108 1.6E-8 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 SII_RS06050 57904d69080a89fcb57036c18fef350e 271 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 171 186 1.6E-8 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 SII_RS06050 57904d69080a89fcb57036c18fef350e 271 Gene3D G3DSA:2.40.100.10 69 266 1.1E-65 T 22-04-2016 IPR029000 Cyclophilin-like domain SII_RS06050 57904d69080a89fcb57036c18fef350e 271 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 114 131 - T 22-04-2016 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 SII_RS03770 e4f4e78f07ba6404c9fd706c48b320d3 419 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 407 7.7E-86 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 SII_RS03770 e4f4e78f07ba6404c9fd706c48b320d3 419 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 417 41.019 T 22-04-2016 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SII_RS03770 e4f4e78f07ba6404c9fd706c48b320d3 419 PANTHER PTHR21090 1 419 1.8E-169 T 22-04-2016 SII_RS03770 e4f4e78f07ba6404c9fd706c48b320d3 419 SUPERFAMILY SSF55205 1 418 5.89E-131 T 22-04-2016 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 SII_RS03770 e4f4e78f07ba6404c9fd706c48b320d3 419 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 415 1.1E-153 T 22-04-2016 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SII_RS03770 e4f4e78f07ba6404c9fd706c48b320d3 419 Gene3D G3DSA:3.65.10.10 222 416 8.6E-54 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 SII_RS03770 e4f4e78f07ba6404c9fd706c48b320d3 419 Gene3D G3DSA:3.65.10.10 21 221 5.4E-63 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 SII_RS06035 3b69458772044034263eda4eb2b7d0df 789 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 71 480 2.0E-48 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 SII_RS06035 3b69458772044034263eda4eb2b7d0df 789 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 500 619 3.8E-26 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 SII_RS06035 3b69458772044034263eda4eb2b7d0df 789 SUPERFAMILY SSF81665 6 99 2.09E-55 T 22-04-2016 SII_RS06035 3b69458772044034263eda4eb2b7d0df 789 SUPERFAMILY SSF81665 583 768 2.09E-55 T 22-04-2016 SII_RS06035 3b69458772044034263eda4eb2b7d0df 789 SUPERFAMILY SSF81665 197 291 2.09E-55 T 22-04-2016 SII_RS06035 3b69458772044034263eda4eb2b7d0df 789 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 506 522 2.1E-7 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 SII_RS06035 3b69458772044034263eda4eb2b7d0df 789 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 565 590 2.1E-7 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 SII_RS06035 3b69458772044034263eda4eb2b7d0df 789 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 534 550 2.1E-7 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 SII_RS06035 3b69458772044034263eda4eb2b7d0df 789 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 398 416 2.1E-7 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 SII_RS06035 3b69458772044034263eda4eb2b7d0df 789 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 457 467 1.4E-21 T 22-04-2016 SII_RS06035 3b69458772044034263eda4eb2b7d0df 789 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 297 311 1.4E-21 T 22-04-2016 SII_RS06035 3b69458772044034263eda4eb2b7d0df 789 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 557 569 1.4E-21 T 22-04-2016 SII_RS06035 3b69458772044034263eda4eb2b7d0df 789 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 145 159 1.4E-21 T 22-04-2016 SII_RS06035 3b69458772044034263eda4eb2b7d0df 789 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 534 553 1.4E-21 T 22-04-2016 SII_RS06035 3b69458772044034263eda4eb2b7d0df 789 SUPERFAMILY SSF56784 295 315 2.41E-37 T 22-04-2016 IPR023214 HAD-like domain SII_RS06035 3b69458772044034263eda4eb2b7d0df 789 SUPERFAMILY SSF56784 395 605 2.41E-37 T 22-04-2016 IPR023214 HAD-like domain SII_RS06035 3b69458772044034263eda4eb2b7d0df 789 SUPERFAMILY SSF81653 99 191 1.24E-20 T 22-04-2016 SII_RS06035 3b69458772044034263eda4eb2b7d0df 789 Pfam PF00702 haloacid dehalogenase-like hydrolase 293 548 1.7E-21 T 22-04-2016 SII_RS06035 3b69458772044034263eda4eb2b7d0df 789 PANTHER PTHR24093 7 714 1.9E-201 T 22-04-2016 SII_RS06035 3b69458772044034263eda4eb2b7d0df 789 PANTHER PTHR24093 761 767 1.9E-201 T 22-04-2016 SII_RS06035 3b69458772044034263eda4eb2b7d0df 789 PANTHER PTHR24093:SF298 7 714 1.9E-201 T 22-04-2016 SII_RS06035 3b69458772044034263eda4eb2b7d0df 789 PANTHER PTHR24093:SF298 761 767 1.9E-201 T 22-04-2016 SII_RS06035 3b69458772044034263eda4eb2b7d0df 789 Gene3D G3DSA:2.70.150.10 3 42 5.1E-27 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 SII_RS06035 3b69458772044034263eda4eb2b7d0df 789 Gene3D G3DSA:2.70.150.10 94 191 5.1E-27 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 SII_RS06035 3b69458772044034263eda4eb2b7d0df 789 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 299 305 - T 22-04-2016 IPR018303 P-type ATPase, phosphorylation site SII_RS06035 3b69458772044034263eda4eb2b7d0df 789 Pfam PF00122 E1-E2 ATPase 68 288 9.7E-52 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 SII_RS06035 3b69458772044034263eda4eb2b7d0df 789 Gene3D G3DSA:1.20.1110.10 503 770 1.1E-45 T 22-04-2016 IPR023298 P-type ATPase, transmembrane domain SII_RS06035 3b69458772044034263eda4eb2b7d0df 789 Gene3D G3DSA:1.20.1110.10 46 93 1.1E-45 T 22-04-2016 IPR023298 P-type ATPase, transmembrane domain SII_RS06035 3b69458772044034263eda4eb2b7d0df 789 Pfam PF00690 Cation transporter/ATPase, N-terminus 6 56 2.5E-4 T 22-04-2016 IPR004014 Cation-transporting P-type ATPase, N-terminal SII_RS06035 3b69458772044034263eda4eb2b7d0df 789 Gene3D G3DSA:3.40.1110.10 287 333 4.3E-8 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 SII_RS02205 adcb73d2482a9590c436d6c0b814545b 468 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 371 379 - T 22-04-2016 IPR018120 Glycoside hydrolase family 1, active site SII_RS02205 adcb73d2482a9590c436d6c0b814545b 468 Gene3D G3DSA:3.20.20.80 3 465 2.6E-149 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 SII_RS02205 adcb73d2482a9590c436d6c0b814545b 468 SUPERFAMILY SSF51445 1 465 3.02E-158 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily SII_RS02205 adcb73d2482a9590c436d6c0b814545b 468 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 9 23 - T 22-04-2016 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site SII_RS02205 adcb73d2482a9590c436d6c0b814545b 468 TIGRFAM TIGR01233 lacG: 6-phospho-beta-galactosidase 2 467 4.1E-271 T 22-04-2016 IPR005928 6-phospho-beta-galactosidase GO:0019512|GO:0033920 KEGG: 00052+3.2.1.85|UniPathway: UPA00542 SII_RS02205 adcb73d2482a9590c436d6c0b814545b 468 PRINTS PR00131 Glycosyl hydrolase family 1 signature 391 402 3.0E-24 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 SII_RS02205 adcb73d2482a9590c436d6c0b814545b 468 PRINTS PR00131 Glycosyl hydrolase family 1 signature 436 448 3.0E-24 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 SII_RS02205 adcb73d2482a9590c436d6c0b814545b 468 PRINTS PR00131 Glycosyl hydrolase family 1 signature 412 429 3.0E-24 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 SII_RS02205 adcb73d2482a9590c436d6c0b814545b 468 PRINTS PR00131 Glycosyl hydrolase family 1 signature 371 379 3.0E-24 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 SII_RS02205 adcb73d2482a9590c436d6c0b814545b 468 PRINTS PR00131 Glycosyl hydrolase family 1 signature 290 304 3.0E-24 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 SII_RS02205 adcb73d2482a9590c436d6c0b814545b 468 PANTHER PTHR10353:SF62 286 468 0.0 T 22-04-2016 SII_RS02205 adcb73d2482a9590c436d6c0b814545b 468 PANTHER PTHR10353:SF62 1 263 0.0 T 22-04-2016 SII_RS02205 adcb73d2482a9590c436d6c0b814545b 468 Pfam PF00232 Glycosyl hydrolase family 1 2 465 1.6E-167 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 SII_RS02205 adcb73d2482a9590c436d6c0b814545b 468 PANTHER PTHR10353 286 468 0.0 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 SII_RS02205 adcb73d2482a9590c436d6c0b814545b 468 PANTHER PTHR10353 1 263 0.0 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 SII_RS02205 adcb73d2482a9590c436d6c0b814545b 468 Hamap MF_01574 6-phospho-beta-galactosidase [lacG]. 1 468 65.842 T 22-04-2016 IPR005928 6-phospho-beta-galactosidase GO:0019512|GO:0033920 KEGG: 00052+3.2.1.85|UniPathway: UPA00542 SII_RS03500 38f4585b69382578fe1d3ed20ef6953a 136 Pfam PF01381 Helix-turn-helix 8 58 2.2E-14 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SII_RS03500 38f4585b69382578fe1d3ed20ef6953a 136 PANTHER PTHR10245 1 61 1.4E-15 T 22-04-2016 SII_RS03500 38f4585b69382578fe1d3ed20ef6953a 136 SUPERFAMILY SSF89447 77 116 5.41E-7 T 22-04-2016 SII_RS03500 38f4585b69382578fe1d3ed20ef6953a 136 PANTHER PTHR10245:SF47 1 61 1.4E-15 T 22-04-2016 SII_RS03500 38f4585b69382578fe1d3ed20ef6953a 136 SMART SM00530 5 60 8.5E-14 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SII_RS03500 38f4585b69382578fe1d3ed20ef6953a 136 Gene3D G3DSA:2.10.260.10 78 116 8.7E-5 T 22-04-2016 SII_RS03500 38f4585b69382578fe1d3ed20ef6953a 136 SUPERFAMILY SSF47413 2 63 5.63E-16 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SII_RS03500 38f4585b69382578fe1d3ed20ef6953a 136 Gene3D G3DSA:1.10.260.40 1 61 9.6E-20 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SII_RS03500 38f4585b69382578fe1d3ed20ef6953a 136 TIGRFAM TIGR01439 lp_hng_hel_AbrB: transcriptional regulator, AbrB family 81 120 1.3E-7 T 22-04-2016 IPR007159 SpoVT-AbrB domain GO:0003677 SII_RS09500 41d1c3d430e7ba2e359a13f487b82a5f 540 Gene3D G3DSA:3.40.50.300 3 100 7.5E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS09500 41d1c3d430e7ba2e359a13f487b82a5f 540 Gene3D G3DSA:3.40.50.300 132 281 7.5E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS09500 41d1c3d430e7ba2e359a13f487b82a5f 540 Gene3D G3DSA:3.40.50.300 320 534 1.3E-33 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS09500 41d1c3d430e7ba2e359a13f487b82a5f 540 SUPERFAMILY SSF52540 293 514 6.95E-35 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS09500 41d1c3d430e7ba2e359a13f487b82a5f 540 PANTHER PTHR19211 1 529 0.0 T 22-04-2016 SII_RS09500 41d1c3d430e7ba2e359a13f487b82a5f 540 ProSitePatterns PS00211 ABC transporters family signature. 439 453 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SII_RS09500 41d1c3d430e7ba2e359a13f487b82a5f 540 SMART SM00382 26 228 2.5E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain SII_RS09500 41d1c3d430e7ba2e359a13f487b82a5f 540 SMART SM00382 344 512 0.64 T 22-04-2016 IPR003593 AAA+ ATPase domain SII_RS09500 41d1c3d430e7ba2e359a13f487b82a5f 540 SUPERFAMILY SSF52540 125 254 4.06E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS09500 41d1c3d430e7ba2e359a13f487b82a5f 540 SUPERFAMILY SSF52540 2 92 4.06E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS09500 41d1c3d430e7ba2e359a13f487b82a5f 540 Pfam PF12848 ABC transporter 224 305 1.9E-20 T 22-04-2016 IPR032781 ABC-transporter extension domain SII_RS09500 41d1c3d430e7ba2e359a13f487b82a5f 540 PANTHER PTHR19211:SF38 1 529 0.0 T 22-04-2016 SII_RS09500 41d1c3d430e7ba2e359a13f487b82a5f 540 Pfam PF00005 ABC transporter 18 184 2.3E-24 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SII_RS09500 41d1c3d430e7ba2e359a13f487b82a5f 540 Pfam PF00005 ABC transporter 335 467 6.2E-13 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SII_RS07205 4a72262555f250d30d7e8a2f7386945c 256 PANTHER PTHR22855:SF42 1 256 1.7E-93 T 22-04-2016 SII_RS07205 4a72262555f250d30d7e8a2f7386945c 256 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 35 46 3.1E-43 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 SII_RS07205 4a72262555f250d30d7e8a2f7386945c 256 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 144 153 3.1E-43 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 SII_RS07205 4a72262555f250d30d7e8a2f7386945c 256 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 100 113 3.1E-43 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 SII_RS07205 4a72262555f250d30d7e8a2f7386945c 256 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 60 78 3.1E-43 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 SII_RS07205 4a72262555f250d30d7e8a2f7386945c 256 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 116 129 3.1E-43 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 SII_RS07205 4a72262555f250d30d7e8a2f7386945c 256 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 81 97 3.1E-43 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 SII_RS07205 4a72262555f250d30d7e8a2f7386945c 256 Gene3D G3DSA:3.90.226.10 8 215 8.6E-48 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SII_RS07205 4a72262555f250d30d7e8a2f7386945c 256 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 1 256 35.974 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 SII_RS07205 4a72262555f250d30d7e8a2f7386945c 256 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 8 256 1.1E-104 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 SII_RS07205 4a72262555f250d30d7e8a2f7386945c 256 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 8 95 2.5E-37 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 SII_RS07205 4a72262555f250d30d7e8a2f7386945c 256 SUPERFAMILY SSF52096 7 255 2.17E-81 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SII_RS07205 4a72262555f250d30d7e8a2f7386945c 256 PANTHER PTHR22855 1 256 1.7E-93 T 22-04-2016 SII_RS05870 9505aa9358c8d1e1a92ef0066909d433 338 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 8 331 81.217 T 22-04-2016 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 SII_RS05870 9505aa9358c8d1e1a92ef0066909d433 338 Gene3D G3DSA:3.40.50.1370 146 317 3.3E-69 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SII_RS05870 9505aa9358c8d1e1a92ef0066909d433 338 PRINTS PR00102 Ornithine carbamoyltransferase signature 229 239 4.6E-28 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 SII_RS05870 9505aa9358c8d1e1a92ef0066909d433 338 PRINTS PR00102 Ornithine carbamoyltransferase signature 125 139 4.6E-28 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 SII_RS05870 9505aa9358c8d1e1a92ef0066909d433 338 PRINTS PR00102 Ornithine carbamoyltransferase signature 85 98 4.6E-28 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 SII_RS05870 9505aa9358c8d1e1a92ef0066909d433 338 PRINTS PR00102 Ornithine carbamoyltransferase signature 52 66 4.6E-28 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 SII_RS05870 9505aa9358c8d1e1a92ef0066909d433 338 PRINTS PR00102 Ornithine carbamoyltransferase signature 309 320 4.6E-28 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 SII_RS05870 9505aa9358c8d1e1a92ef0066909d433 338 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 155 328 1.2E-54 T 22-04-2016 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 SII_RS05870 9505aa9358c8d1e1a92ef0066909d433 338 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 9 149 1.1E-43 T 22-04-2016 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 SII_RS05870 9505aa9358c8d1e1a92ef0066909d433 338 PANTHER PTHR11405 1 275 2.1E-194 T 22-04-2016 SII_RS05870 9505aa9358c8d1e1a92ef0066909d433 338 PANTHER PTHR11405 295 335 2.1E-194 T 22-04-2016 SII_RS05870 9505aa9358c8d1e1a92ef0066909d433 338 SUPERFAMILY SSF53671 6 332 1.17E-101 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SII_RS05870 9505aa9358c8d1e1a92ef0066909d433 338 Gene3D G3DSA:3.40.50.1370 6 145 6.6E-54 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SII_RS05870 9505aa9358c8d1e1a92ef0066909d433 338 PANTHER PTHR11405:SF44 1 275 2.1E-194 T 22-04-2016 SII_RS05870 9505aa9358c8d1e1a92ef0066909d433 338 PANTHER PTHR11405:SF44 295 335 2.1E-194 T 22-04-2016 SII_RS05870 9505aa9358c8d1e1a92ef0066909d433 338 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 54 61 - T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SII_RS05870 9505aa9358c8d1e1a92ef0066909d433 338 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 54 73 4.2E-23 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SII_RS05870 9505aa9358c8d1e1a92ef0066909d433 338 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 136 147 4.2E-23 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SII_RS05870 9505aa9358c8d1e1a92ef0066909d433 338 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 266 275 4.2E-23 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SII_RS05870 9505aa9358c8d1e1a92ef0066909d433 338 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 295 318 4.2E-23 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SII_RS05870 9505aa9358c8d1e1a92ef0066909d433 338 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 9 330 1.2E-122 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 SII_RS03825 d23f5c99b3e0a444e9ad632c0fed5c03 652 PANTHER PTHR23389 1 510 2.5E-180 T 22-04-2016 SII_RS03825 d23f5c99b3e0a444e9ad632c0fed5c03 652 Pfam PF14520 Helix-hairpin-helix domain 432 487 4.1E-4 T 22-04-2016 SII_RS03825 d23f5c99b3e0a444e9ad632c0fed5c03 652 PIRSF PIRSF001604 1 652 1.3E-243 T 22-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 SII_RS03825 d23f5c99b3e0a444e9ad632c0fed5c03 652 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 395 420 5.0E-9 T 22-04-2016 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 SII_RS03825 d23f5c99b3e0a444e9ad632c0fed5c03 652 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 319 334 - T 22-04-2016 IPR033136 NAD-dependent DNA ligase, conserved site SII_RS03825 d23f5c99b3e0a444e9ad632c0fed5c03 652 SUPERFAMILY SSF50249 306 386 3.94E-26 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SII_RS03825 d23f5c99b3e0a444e9ad632c0fed5c03 652 Gene3D G3DSA:2.40.50.140 308 379 1.7E-32 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SII_RS03825 d23f5c99b3e0a444e9ad632c0fed5c03 652 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 8 647 4.5E-245 T 22-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 SII_RS03825 d23f5c99b3e0a444e9ad632c0fed5c03 652 Pfam PF12826 Helix-hairpin-helix motif 496 557 2.1E-18 T 22-04-2016 SII_RS03825 d23f5c99b3e0a444e9ad632c0fed5c03 652 PANTHER PTHR23389:SF9 1 510 2.5E-180 T 22-04-2016 SII_RS03825 d23f5c99b3e0a444e9ad632c0fed5c03 652 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 582 650 6.3E-14 T 22-04-2016 IPR001357 BRCT domain SII_RS03825 d23f5c99b3e0a444e9ad632c0fed5c03 652 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 109 138 - T 22-04-2016 IPR018239 NAD-dependent DNA ligase, active site SII_RS03825 d23f5c99b3e0a444e9ad632c0fed5c03 652 SMART SM00532 2 434 4.6E-240 T 22-04-2016 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 SII_RS03825 d23f5c99b3e0a444e9ad632c0fed5c03 652 SUPERFAMILY SSF47781 391 571 6.67E-58 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 SII_RS03825 d23f5c99b3e0a444e9ad632c0fed5c03 652 Gene3D G3DSA:3.40.50.10190 579 651 5.0E-23 T 22-04-2016 IPR001357 BRCT domain SII_RS03825 d23f5c99b3e0a444e9ad632c0fed5c03 652 SUPERFAMILY SSF52113 581 651 1.64E-18 T 22-04-2016 IPR001357 BRCT domain SII_RS03825 d23f5c99b3e0a444e9ad632c0fed5c03 652 Gene3D G3DSA:1.10.150.20 421 489 4.7E-27 T 22-04-2016 SII_RS03825 d23f5c99b3e0a444e9ad632c0fed5c03 652 SUPERFAMILY SSF56091 2 306 1.13E-113 T 22-04-2016 SII_RS03825 d23f5c99b3e0a444e9ad632c0fed5c03 652 Gene3D G3DSA:1.10.150.20 490 570 2.6E-22 T 22-04-2016 SII_RS03825 d23f5c99b3e0a444e9ad632c0fed5c03 652 Gene3D G3DSA:1.10.287.610 2 64 6.8E-26 T 22-04-2016 SII_RS03825 d23f5c99b3e0a444e9ad632c0fed5c03 652 Hamap MF_01588 DNA ligase [ligA]. 2 652 49.222 T 22-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 SII_RS03825 d23f5c99b3e0a444e9ad632c0fed5c03 652 Gene3D G3DSA:3.30.470.30 113 239 2.1E-43 T 22-04-2016 SII_RS03825 d23f5c99b3e0a444e9ad632c0fed5c03 652 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 310 385 2.9E-33 T 22-04-2016 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 SII_RS03825 d23f5c99b3e0a444e9ad632c0fed5c03 652 SMART SM00292 579 651 3.6E-8 T 22-04-2016 IPR001357 BRCT domain SII_RS03825 d23f5c99b3e0a444e9ad632c0fed5c03 652 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 2 306 4.1E-120 T 22-04-2016 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 SII_RS08470 381b33d54f193eac6dbd2e63fadd16d0 1212 SUPERFAMILY SSF64484 5 1183 0.0 T 22-04-2016 SII_RS08470 381b33d54f193eac6dbd2e63fadd16d0 1212 Pfam PF05000 RNA polymerase Rpb1, domain 4 692 759 1.2E-13 T 22-04-2016 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SII_RS08470 381b33d54f193eac6dbd2e63fadd16d0 1212 Pfam PF00623 RNA polymerase Rpb1, domain 2 334 386 6.2E-9 T 22-04-2016 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SII_RS08470 381b33d54f193eac6dbd2e63fadd16d0 1212 Pfam PF00623 RNA polymerase Rpb1, domain 2 387 475 9.6E-30 T 22-04-2016 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SII_RS08470 381b33d54f193eac6dbd2e63fadd16d0 1212 PANTHER PTHR19376:SF32 558 1078 0.0 T 22-04-2016 SII_RS08470 381b33d54f193eac6dbd2e63fadd16d0 1212 PANTHER PTHR19376:SF32 1119 1179 0.0 T 22-04-2016 SII_RS08470 381b33d54f193eac6dbd2e63fadd16d0 1212 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 5 1192 10.241 T 22-04-2016 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SII_RS08470 381b33d54f193eac6dbd2e63fadd16d0 1212 Pfam PF04997 RNA polymerase Rpb1, domain 1 6 332 3.3E-86 T 22-04-2016 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SII_RS08470 381b33d54f193eac6dbd2e63fadd16d0 1212 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 10 1183 0.0 T 22-04-2016 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SII_RS08470 381b33d54f193eac6dbd2e63fadd16d0 1212 PANTHER PTHR19376 558 1078 0.0 T 22-04-2016 SII_RS08470 381b33d54f193eac6dbd2e63fadd16d0 1212 PANTHER PTHR19376 2 541 0.0 T 22-04-2016 SII_RS08470 381b33d54f193eac6dbd2e63fadd16d0 1212 Gene3D G3DSA:2.40.40.20 339 366 4.9E-38 T 22-04-2016 SII_RS08470 381b33d54f193eac6dbd2e63fadd16d0 1212 Gene3D G3DSA:2.40.40.20 407 477 4.9E-38 T 22-04-2016 SII_RS08470 381b33d54f193eac6dbd2e63fadd16d0 1212 SMART SM00663 225 504 9.0E-176 T 22-04-2016 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SII_RS08470 381b33d54f193eac6dbd2e63fadd16d0 1212 Pfam PF04983 RNA polymerase Rpb1, domain 3 479 663 2.1E-34 T 22-04-2016 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SII_RS08470 381b33d54f193eac6dbd2e63fadd16d0 1212 PANTHER PTHR19376 1119 1179 0.0 T 22-04-2016 SII_RS08470 381b33d54f193eac6dbd2e63fadd16d0 1212 Pfam PF04998 RNA polymerase Rpb1, domain 5 770 1131 1.1E-62 T 22-04-2016 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SII_RS08470 381b33d54f193eac6dbd2e63fadd16d0 1212 Gene3D G3DSA:2.40.50.100 972 1028 7.8E-6 T 22-04-2016 SII_RS08470 381b33d54f193eac6dbd2e63fadd16d0 1212 PANTHER PTHR19376:SF32 2 541 0.0 T 22-04-2016 SII_RS00320 a0d8c4bbb05a9f72ce700da7046b423b 193 SMART SM01120 30 188 4.9E-70 T 22-04-2016 IPR004007 DhaL domain GO:0004371|GO:0006071 SII_RS00320 a0d8c4bbb05a9f72ce700da7046b423b 193 PANTHER PTHR28629 1 192 4.4E-58 T 22-04-2016 SII_RS00320 a0d8c4bbb05a9f72ce700da7046b423b 193 TIGRFAM TIGR02365 dha_L_ycgS: dihydroxyacetone kinase, L subunit 7 187 1.2E-67 T 22-04-2016 IPR012737 Dihydroxyacetone kinase, subunit L GO:0016772 KEGG: 00563+2.7.-.- SII_RS00320 a0d8c4bbb05a9f72ce700da7046b423b 193 Pfam PF02734 DAK2 domain 30 187 4.3E-48 T 22-04-2016 IPR004007 DhaL domain GO:0004371|GO:0006071 SII_RS00320 a0d8c4bbb05a9f72ce700da7046b423b 193 SUPERFAMILY SSF101473 1 189 9.55E-59 T 22-04-2016 IPR004007 DhaL domain GO:0004371|GO:0006071 SII_RS02960 018d296654aa96de99b000880a429644 631 PANTHER PTHR19211 1 573 0.0 T 22-04-2016 SII_RS02960 018d296654aa96de99b000880a429644 631 SUPERFAMILY SSF52540 312 531 3.62E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS02960 018d296654aa96de99b000880a429644 631 SUPERFAMILY SSF52540 4 94 1.33E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS02960 018d296654aa96de99b000880a429644 631 SUPERFAMILY SSF52540 132 238 1.33E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS02960 018d296654aa96de99b000880a429644 631 SMART SM00382 28 247 7.6E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain SII_RS02960 018d296654aa96de99b000880a429644 631 SMART SM00382 351 516 2.1E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain SII_RS02960 018d296654aa96de99b000880a429644 631 Gene3D G3DSA:3.40.50.300 7 102 1.1E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS02960 018d296654aa96de99b000880a429644 631 Gene3D G3DSA:3.40.50.300 139 279 1.1E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS02960 018d296654aa96de99b000880a429644 631 Gene3D G3DSA:3.40.50.300 328 565 1.8E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS02960 018d296654aa96de99b000880a429644 631 PANTHER PTHR19211:SF64 1 573 0.0 T 22-04-2016 SII_RS02960 018d296654aa96de99b000880a429644 631 Pfam PF00005 ABC transporter 344 472 7.6E-20 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SII_RS02960 018d296654aa96de99b000880a429644 631 Pfam PF00005 ABC transporter 20 191 2.5E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SII_RS02960 018d296654aa96de99b000880a429644 631 Pfam PF12848 ABC transporter 231 307 7.6E-26 T 22-04-2016 IPR032781 ABC-transporter extension domain SII_RS02960 018d296654aa96de99b000880a429644 631 ProSitePatterns PS00211 ABC transporters family signature. 444 458 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SII_RS04390 a0d7d18a8719d361ae9339119da7b478 354 PANTHER PTHR32196:SF30 1 347 3.2E-92 T 22-04-2016 SII_RS04390 a0d7d18a8719d361ae9339119da7b478 354 PANTHER PTHR32196 1 347 3.2E-92 T 22-04-2016 SII_RS04390 a0d7d18a8719d361ae9339119da7b478 354 Pfam PF02653 Branched-chain amino acid transport system / permease component 52 332 3.6E-36 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 SII_RS01135 2b63b49e4ff0c7ffff45d6777b87513b 292 SUPERFAMILY SSF54211 1 148 8.35E-32 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SII_RS01135 2b63b49e4ff0c7ffff45d6777b87513b 292 TIGRFAM TIGR00549 mevalon_kin: mevalonate kinase 10 265 3.7E-67 T 22-04-2016 IPR006205 Mevalonate kinase GO:0004496|GO:0005524|GO:0005737|GO:0008299 KEGG: 00900+2.7.1.36|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-922|UniPathway: UPA00057 SII_RS01135 2b63b49e4ff0c7ffff45d6777b87513b 292 Gene3D G3DSA:3.30.230.10 71 167 3.3E-22 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SII_RS01135 2b63b49e4ff0c7ffff45d6777b87513b 292 Gene3D G3DSA:3.30.230.10 4 48 1.5E-11 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SII_RS01135 2b63b49e4ff0c7ffff45d6777b87513b 292 Pfam PF00288 GHMP kinases N terminal domain 78 140 9.6E-13 T 22-04-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 SII_RS01135 2b63b49e4ff0c7ffff45d6777b87513b 292 Gene3D G3DSA:3.30.70.890 168 288 2.6E-34 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain SII_RS01135 2b63b49e4ff0c7ffff45d6777b87513b 292 PRINTS PR00959 Mevalonate kinase family signature 81 103 1.8E-19 T 22-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 SII_RS01135 2b63b49e4ff0c7ffff45d6777b87513b 292 PRINTS PR00959 Mevalonate kinase family signature 250 267 1.8E-19 T 22-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 SII_RS01135 2b63b49e4ff0c7ffff45d6777b87513b 292 PRINTS PR00959 Mevalonate kinase family signature 10 34 1.8E-19 T 22-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 SII_RS01135 2b63b49e4ff0c7ffff45d6777b87513b 292 PANTHER PTHR10457 7 281 6.5E-49 T 22-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 SII_RS01135 2b63b49e4ff0c7ffff45d6777b87513b 292 SUPERFAMILY SSF55060 157 290 2.16E-30 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain SII_RS01135 2b63b49e4ff0c7ffff45d6777b87513b 292 Pfam PF08544 GHMP kinases C terminal 205 273 1.8E-13 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain SII_RS04360 7447430a5131401a77ad8e987d899c3a 148 Gene3D G3DSA:1.10.10.10 11 146 5.6E-36 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SII_RS04360 7447430a5131401a77ad8e987d899c3a 148 PRINTS PR00598 Bacterial regulatory protein MarR family signature 124 144 1.4E-6 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SII_RS04360 7447430a5131401a77ad8e987d899c3a 148 PRINTS PR00598 Bacterial regulatory protein MarR family signature 94 110 1.4E-6 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SII_RS04360 7447430a5131401a77ad8e987d899c3a 148 PRINTS PR00598 Bacterial regulatory protein MarR family signature 75 90 1.4E-6 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SII_RS04360 7447430a5131401a77ad8e987d899c3a 148 SUPERFAMILY SSF46785 14 146 2.12E-30 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SII_RS04360 7447430a5131401a77ad8e987d899c3a 148 PANTHER PTHR33164 16 143 1.2E-27 T 22-04-2016 SII_RS04360 7447430a5131401a77ad8e987d899c3a 148 Pfam PF01047 MarR family 41 98 3.2E-15 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SII_RS04360 7447430a5131401a77ad8e987d899c3a 148 PANTHER PTHR33164:SF4 16 143 1.2E-27 T 22-04-2016 SII_RS04360 7447430a5131401a77ad8e987d899c3a 148 SMART SM00347 34 134 9.9E-20 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SII_RS00065 69250cdcd26234b993741d85101d3153 656 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 224 356 1.6E-44 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 SII_RS00065 69250cdcd26234b993741d85101d3153 656 Pfam PF01434 Peptidase family M41 419 623 7.4E-79 T 22-04-2016 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 SII_RS00065 69250cdcd26234b993741d85101d3153 656 Pfam PF06480 FtsH Extracellular 14 123 1.1E-10 T 22-04-2016 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 SII_RS00065 69250cdcd26234b993741d85101d3153 656 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 12 634 37.045 T 22-04-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 SII_RS00065 69250cdcd26234b993741d85101d3153 656 Gene3D G3DSA:3.40.50.300 182 366 1.7E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS00065 69250cdcd26234b993741d85101d3153 656 PANTHER PTHR23076 1 656 2.7E-303 T 22-04-2016 SII_RS00065 69250cdcd26234b993741d85101d3153 656 PANTHER PTHR23076:SF10 1 656 2.7E-303 T 22-04-2016 SII_RS00065 69250cdcd26234b993741d85101d3153 656 SMART SM00382 220 359 2.8E-23 T 22-04-2016 IPR003593 AAA+ ATPase domain SII_RS00065 69250cdcd26234b993741d85101d3153 656 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 135 624 4.6E-226 T 22-04-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 SII_RS00065 69250cdcd26234b993741d85101d3153 656 SUPERFAMILY SSF140990 439 632 3.53E-68 T 22-04-2016 SII_RS00065 69250cdcd26234b993741d85101d3153 656 SUPERFAMILY SSF52540 181 427 3.52E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS00065 69250cdcd26234b993741d85101d3153 656 ProSitePatterns PS00674 AAA-protein family signature. 327 345 - T 22-04-2016 IPR003960 ATPase, AAA-type, conserved site GO:0005524 SII_RS00065 69250cdcd26234b993741d85101d3153 656 Gene3D G3DSA:1.10.8.60 367 431 3.4E-27 T 22-04-2016 SII_RS07240 659ebe17269784559166cdb0df4760d1 308 PANTHER PTHR10982 1 300 1.4E-129 T 22-04-2016 SII_RS07240 659ebe17269784559166cdb0df4760d1 308 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 3 287 4.5E-101 T 22-04-2016 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 SII_RS07240 659ebe17269784559166cdb0df4760d1 308 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 7 307 2.7E-47 T 22-04-2016 IPR020801 Polyketide synthase, acyl transferase domain SII_RS07240 659ebe17269784559166cdb0df4760d1 308 SUPERFAMILY SSF55048 126 195 9.68E-18 T 22-04-2016 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding GO:0003824|GO:0008152 SII_RS07240 659ebe17269784559166cdb0df4760d1 308 SUPERFAMILY SSF52151 4 120 1.54E-73 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 SII_RS07240 659ebe17269784559166cdb0df4760d1 308 SUPERFAMILY SSF52151 188 304 1.54E-73 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 SII_RS07240 659ebe17269784559166cdb0df4760d1 308 Gene3D G3DSA:3.40.366.10 195 296 6.8E-70 T 22-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 SII_RS07240 659ebe17269784559166cdb0df4760d1 308 Gene3D G3DSA:3.40.366.10 2 120 6.8E-70 T 22-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 SII_RS07240 659ebe17269784559166cdb0df4760d1 308 Pfam PF00698 Acyl transferase domain 6 288 9.6E-37 T 22-04-2016 IPR014043 Acyl transferase SII_RS07240 659ebe17269784559166cdb0df4760d1 308 Gene3D G3DSA:3.30.70.250 123 194 7.8E-29 T 22-04-2016 SII_RS07240 659ebe17269784559166cdb0df4760d1 308 PIRSF PIRSF000446 1 306 7.2E-102 T 22-04-2016 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388|UniPathway: UPA00094 SII_RS03065 dc48e69da7efa6e265bb23432e0c9da2 407 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 76 85 - T 22-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 SII_RS03065 dc48e69da7efa6e265bb23432e0c9da2 407 Pfam PF01546 Peptidase family M20/M25/M40 141 400 7.7E-10 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 SII_RS03065 dc48e69da7efa6e265bb23432e0c9da2 407 Pfam PF07687 Peptidase dimerisation domain 210 309 1.0E-11 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain SII_RS03065 dc48e69da7efa6e265bb23432e0c9da2 407 PIRSF PIRSF037215 1 407 1.2E-177 T 22-04-2016 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 SII_RS03065 dc48e69da7efa6e265bb23432e0c9da2 407 TIGRFAM TIGR01882 peptidase-T: peptidase T 2 405 1.8E-195 T 22-04-2016 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 SII_RS03065 dc48e69da7efa6e265bb23432e0c9da2 407 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 140 179 - T 22-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 SII_RS03065 dc48e69da7efa6e265bb23432e0c9da2 407 Gene3D G3DSA:3.40.630.10 323 402 1.9E-106 T 22-04-2016 SII_RS03065 dc48e69da7efa6e265bb23432e0c9da2 407 Gene3D G3DSA:3.40.630.10 2 211 1.9E-106 T 22-04-2016 SII_RS03065 dc48e69da7efa6e265bb23432e0c9da2 407 Gene3D G3DSA:3.30.70.360 212 320 2.0E-46 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain SII_RS03065 dc48e69da7efa6e265bb23432e0c9da2 407 SUPERFAMILY SSF53187 4 212 1.41E-69 T 22-04-2016 SII_RS03065 dc48e69da7efa6e265bb23432e0c9da2 407 SUPERFAMILY SSF53187 323 402 1.41E-69 T 22-04-2016 SII_RS03065 dc48e69da7efa6e265bb23432e0c9da2 407 SUPERFAMILY SSF55031 211 321 1.66E-41 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain SII_RS03065 dc48e69da7efa6e265bb23432e0c9da2 407 PANTHER PTHR11014 133 407 1.8E-168 T 22-04-2016 SII_RS03065 dc48e69da7efa6e265bb23432e0c9da2 407 PANTHER PTHR11014 5 93 1.8E-168 T 22-04-2016 SII_RS03065 dc48e69da7efa6e265bb23432e0c9da2 407 Hamap MF_00550 Peptidase T [pepT]. 3 405 55.601 T 22-04-2016 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 SII_RS03065 dc48e69da7efa6e265bb23432e0c9da2 407 PANTHER PTHR11014:SF3 133 407 1.8E-168 T 22-04-2016 SII_RS03065 dc48e69da7efa6e265bb23432e0c9da2 407 PANTHER PTHR11014:SF3 5 93 1.8E-168 T 22-04-2016 SII_RS02025 68ade2823f3fffac2e1c0533543b74d9 143 PRINTS PR01467 Bacterial arginine repressor signature 37 52 7.0E-16 T 22-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 SII_RS02025 68ade2823f3fffac2e1c0533543b74d9 143 PRINTS PR01467 Bacterial arginine repressor signature 83 96 7.0E-16 T 22-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 SII_RS02025 68ade2823f3fffac2e1c0533543b74d9 143 PRINTS PR01467 Bacterial arginine repressor signature 21 34 7.0E-16 T 22-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 SII_RS02025 68ade2823f3fffac2e1c0533543b74d9 143 PRINTS PR01467 Bacterial arginine repressor signature 113 128 7.0E-16 T 22-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 SII_RS02025 68ade2823f3fffac2e1c0533543b74d9 143 Pfam PF02863 Arginine repressor, C-terminal domain 77 141 3.2E-11 T 22-04-2016 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 UniPathway: UPA00068 SII_RS02025 68ade2823f3fffac2e1c0533543b74d9 143 PANTHER PTHR34471 1 143 6.0E-46 T 22-04-2016 SII_RS02025 68ade2823f3fffac2e1c0533543b74d9 143 Gene3D G3DSA:1.10.10.10 9 66 6.1E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SII_RS02025 68ade2823f3fffac2e1c0533543b74d9 143 Gene3D G3DSA:3.30.1360.40 77 143 7.9E-12 T 22-04-2016 IPR024946 Arginine repressor C-terminal-like domain SII_RS02025 68ade2823f3fffac2e1c0533543b74d9 143 SUPERFAMILY SSF46785 1 68 5.99E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SII_RS02025 68ade2823f3fffac2e1c0533543b74d9 143 SUPERFAMILY SSF55252 77 143 3.79E-13 T 22-04-2016 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 UniPathway: UPA00068 SII_RS02025 68ade2823f3fffac2e1c0533543b74d9 143 PANTHER PTHR34471:SF1 1 143 6.0E-46 T 22-04-2016 SII_RS02025 68ade2823f3fffac2e1c0533543b74d9 143 Pfam PF01316 Arginine repressor, DNA binding domain 1 68 2.9E-21 T 22-04-2016 IPR020900 Arginine repressor, DNA-binding domain GO:0003700|GO:0006355|GO:0006525 UniPathway: UPA00068 SII_RS02025 68ade2823f3fffac2e1c0533543b74d9 143 Hamap MF_00173 Arginine repressor [argR]. 1 143 42.59 T 22-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 SII_RS07195 f23fbe3a963ed0da2c405a3d1b2fa267 425 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 421 42.694 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 SII_RS07195 f23fbe3a963ed0da2c405a3d1b2fa267 425 PANTHER PTHR11778 1 425 2.1E-224 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 SII_RS07195 f23fbe3a963ed0da2c405a3d1b2fa267 425 Gene3D G3DSA:3.30.930.10 106 419 2.2E-145 T 22-04-2016 SII_RS07195 f23fbe3a963ed0da2c405a3d1b2fa267 425 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 222 399 3.2E-36 T 22-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SII_RS07195 f23fbe3a963ed0da2c405a3d1b2fa267 425 PRINTS PR00981 Seryl-tRNA synthetase signature 263 275 2.9E-33 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 SII_RS07195 f23fbe3a963ed0da2c405a3d1b2fa267 425 PRINTS PR00981 Seryl-tRNA synthetase signature 350 366 2.9E-33 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 SII_RS07195 f23fbe3a963ed0da2c405a3d1b2fa267 425 PRINTS PR00981 Seryl-tRNA synthetase signature 275 288 2.9E-33 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 SII_RS07195 f23fbe3a963ed0da2c405a3d1b2fa267 425 PRINTS PR00981 Seryl-tRNA synthetase signature 332 348 2.9E-33 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 SII_RS07195 f23fbe3a963ed0da2c405a3d1b2fa267 425 PRINTS PR00981 Seryl-tRNA synthetase signature 315 328 2.9E-33 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 SII_RS07195 f23fbe3a963ed0da2c405a3d1b2fa267 425 SUPERFAMILY SSF46589 1 113 2.72E-31 T 22-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 SII_RS07195 f23fbe3a963ed0da2c405a3d1b2fa267 425 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 416 1.4E-174 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 SII_RS07195 f23fbe3a963ed0da2c405a3d1b2fa267 425 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 108 3.7E-32 T 22-04-2016 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|UniPathway: UPA00906 SII_RS07195 f23fbe3a963ed0da2c405a3d1b2fa267 425 Gene3D G3DSA:1.10.287.40 1 105 3.7E-25 T 22-04-2016 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|UniPathway: UPA00906 SII_RS07195 f23fbe3a963ed0da2c405a3d1b2fa267 425 PIRSF PIRSF001529 1 425 1.4E-184 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 SII_RS07195 f23fbe3a963ed0da2c405a3d1b2fa267 425 SUPERFAMILY SSF55681 117 419 1.61E-109 T 22-04-2016 SII_RS06975 2ae54cf049423887c93d071fdac0b240 652 Gene3D G3DSA:3.90.76.10 42 219 1.1E-38 T 22-04-2016 SII_RS06975 2ae54cf049423887c93d071fdac0b240 652 Gene3D G3DSA:3.10.105.10 300 577 5.9E-31 T 22-04-2016 SII_RS06975 2ae54cf049423887c93d071fdac0b240 652 PANTHER PTHR30290:SF10 328 386 8.9E-128 T 22-04-2016 SII_RS06975 2ae54cf049423887c93d071fdac0b240 652 PANTHER PTHR30290:SF10 1 309 8.9E-128 T 22-04-2016 SII_RS06975 2ae54cf049423887c93d071fdac0b240 652 PANTHER PTHR30290:SF10 402 577 8.9E-128 T 22-04-2016 SII_RS06975 2ae54cf049423887c93d071fdac0b240 652 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 79 101 - T 22-04-2016 IPR023765 Solute-binding protein family 5, conserved site SII_RS06975 2ae54cf049423887c93d071fdac0b240 652 PANTHER PTHR30290 328 386 8.9E-128 T 22-04-2016 SII_RS06975 2ae54cf049423887c93d071fdac0b240 652 PANTHER PTHR30290 1 309 8.9E-128 T 22-04-2016 SII_RS06975 2ae54cf049423887c93d071fdac0b240 652 PANTHER PTHR30290 402 577 8.9E-128 T 22-04-2016 SII_RS06975 2ae54cf049423887c93d071fdac0b240 652 SUPERFAMILY SSF53850 27 579 1.05E-73 T 22-04-2016 SII_RS06975 2ae54cf049423887c93d071fdac0b240 652 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 74 517 5.4E-47 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain SII_RS00195 eba25152053710c418204640cdd0ab70 393 SUPERFAMILY SSF54001 271 392 1.18E-25 T 22-04-2016 SII_RS00195 eba25152053710c418204640cdd0ab70 393 PRINTS PR01852 Streptococcal non-M secreted SibA protein signature 288 310 2.7E-48 T 22-04-2016 IPR009148 Streptococcal non-M secreted SibA SII_RS00195 eba25152053710c418204640cdd0ab70 393 PRINTS PR01852 Streptococcal non-M secreted SibA protein signature 214 241 2.7E-48 T 22-04-2016 IPR009148 Streptococcal non-M secreted SibA SII_RS00195 eba25152053710c418204640cdd0ab70 393 PRINTS PR01852 Streptococcal non-M secreted SibA protein signature 356 379 2.7E-48 T 22-04-2016 IPR009148 Streptococcal non-M secreted SibA SII_RS00195 eba25152053710c418204640cdd0ab70 393 PRINTS PR01852 Streptococcal non-M secreted SibA protein signature 313 337 2.7E-48 T 22-04-2016 IPR009148 Streptococcal non-M secreted SibA SII_RS00195 eba25152053710c418204640cdd0ab70 393 Pfam PF05257 CHAP domain 286 363 2.5E-15 T 22-04-2016 IPR007921 CHAP domain SII_RS07645 df28381ba5a05a4c371d50c98d7e2bd7 249 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 5 242 1.4E-61 T 22-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 SII_RS07645 df28381ba5a05a4c371d50c98d7e2bd7 249 SUPERFAMILY SSF55120 1 248 1.29E-79 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 SII_RS07645 df28381ba5a05a4c371d50c98d7e2bd7 249 PANTHER PTHR11142 1 249 1.2E-85 T 22-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 SII_RS07645 df28381ba5a05a4c371d50c98d7e2bd7 249 PANTHER PTHR11142:SF0 1 249 1.2E-85 T 22-04-2016 SII_RS07645 df28381ba5a05a4c371d50c98d7e2bd7 249 Pfam PF01416 tRNA pseudouridine synthase 144 248 8.6E-27 T 22-04-2016 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 SII_RS07645 df28381ba5a05a4c371d50c98d7e2bd7 249 Pfam PF01416 tRNA pseudouridine synthase 6 104 2.8E-12 T 22-04-2016 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 SII_RS07645 df28381ba5a05a4c371d50c98d7e2bd7 249 Gene3D G3DSA:3.30.70.660 108 248 9.9E-44 T 22-04-2016 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 SII_RS07645 df28381ba5a05a4c371d50c98d7e2bd7 249 Gene3D G3DSA:3.30.70.580 1 105 5.5E-35 T 22-04-2016 IPR020094 Pseudouridine synthase I, TruA, N-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 SII_RS07645 df28381ba5a05a4c371d50c98d7e2bd7 249 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 2 247 34.126 T 22-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 SII_RS07645 df28381ba5a05a4c371d50c98d7e2bd7 249 PIRSF PIRSF001430 1 249 4.2E-78 T 22-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 SII_RS04005 cfcf550c9689c4fb85f36f3104c0e349 524 Gene3D G3DSA:1.20.120.140 3 90 2.0E-34 T 22-04-2016 SII_RS04005 cfcf550c9689c4fb85f36f3104c0e349 524 TIGRFAM TIGR00959 ffh: signal recognition particle protein 3 428 2.6E-191 T 22-04-2016 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 SII_RS04005 cfcf550c9689c4fb85f36f3104c0e349 524 PANTHER PTHR11564:SF7 1 435 1.2E-254 T 22-04-2016 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 SII_RS04005 cfcf550c9689c4fb85f36f3104c0e349 524 Pfam PF02881 SRP54-type protein, helical bundle domain 6 83 2.2E-23 T 22-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 SII_RS04005 cfcf550c9689c4fb85f36f3104c0e349 524 Pfam PF00448 SRP54-type protein, GTPase domain 101 297 2.7E-76 T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 SII_RS04005 cfcf550c9689c4fb85f36f3104c0e349 524 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 270 283 - T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 SII_RS04005 cfcf550c9689c4fb85f36f3104c0e349 524 SUPERFAMILY SSF47446 328 429 3.27E-34 T 22-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 SII_RS04005 cfcf550c9689c4fb85f36f3104c0e349 524 SUPERFAMILY SSF52540 43 355 2.92E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS04005 cfcf550c9689c4fb85f36f3104c0e349 524 Gene3D G3DSA:3.40.50.300 99 298 2.0E-75 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS04005 cfcf550c9689c4fb85f36f3104c0e349 524 SMART SM00382 100 248 2.5E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain SII_RS04005 cfcf550c9689c4fb85f36f3104c0e349 524 SMART SM00962 101 297 2.1E-114 T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 SII_RS04005 cfcf550c9689c4fb85f36f3104c0e349 524 Gene3D G3DSA:1.10.260.30 328 430 2.7E-37 T 22-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 SII_RS04005 cfcf550c9689c4fb85f36f3104c0e349 524 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 6 469 34.337 T 22-04-2016 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 SII_RS04005 cfcf550c9689c4fb85f36f3104c0e349 524 SMART SM00963 2 87 4.7E-32 T 22-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 SII_RS04005 cfcf550c9689c4fb85f36f3104c0e349 524 PANTHER PTHR11564 1 435 1.2E-254 T 22-04-2016 SII_RS04005 cfcf550c9689c4fb85f36f3104c0e349 524 Pfam PF02978 Signal peptide binding domain 328 427 1.1E-30 T 22-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 SII_RS01760 e9f65e74b94b8a9f297f3576b806a3d2 1036 Pfam PF00176 SNF2 family N-terminal domain 598 852 3.8E-42 T 22-04-2016 IPR000330 SNF2-related, N-terminal domain GO:0005524 SII_RS01760 e9f65e74b94b8a9f297f3576b806a3d2 1036 SMART SM00490 892 974 9.2E-26 T 22-04-2016 IPR001650 Helicase, C-terminal SII_RS01760 e9f65e74b94b8a9f297f3576b806a3d2 1036 Pfam PF00271 Helicase conserved C-terminal domain 863 974 1.1E-20 T 22-04-2016 IPR001650 Helicase, C-terminal SII_RS01760 e9f65e74b94b8a9f297f3576b806a3d2 1036 Gene3D G3DSA:3.40.50.300 859 1006 5.0E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS01760 e9f65e74b94b8a9f297f3576b806a3d2 1036 Gene3D G3DSA:3.40.50.300 582 748 1.5E-25 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS01760 e9f65e74b94b8a9f297f3576b806a3d2 1036 Pfam PF08455 Bacterial SNF2 helicase associated 215 574 8.5E-57 T 22-04-2016 IPR013663 Helicase, SWF/SNF/SWI type, bacterial SII_RS01760 e9f65e74b94b8a9f297f3576b806a3d2 1036 SUPERFAMILY SSF52540 566 781 3.77E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS01760 e9f65e74b94b8a9f297f3576b806a3d2 1036 SMART SM00487 581 762 1.4E-30 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain SII_RS01760 e9f65e74b94b8a9f297f3576b806a3d2 1036 PANTHER PTHR10799:SF651 572 1032 7.9E-267 T 22-04-2016 SII_RS01760 e9f65e74b94b8a9f297f3576b806a3d2 1036 PANTHER PTHR10799:SF651 8 121 7.9E-267 T 22-04-2016 SII_RS01760 e9f65e74b94b8a9f297f3576b806a3d2 1036 PANTHER PTHR10799 572 1032 7.9E-267 T 22-04-2016 SII_RS01760 e9f65e74b94b8a9f297f3576b806a3d2 1036 PANTHER PTHR10799 8 121 7.9E-267 T 22-04-2016 SII_RS01760 e9f65e74b94b8a9f297f3576b806a3d2 1036 SUPERFAMILY SSF52540 783 1030 2.41E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS07580 71cbc63e766a9dfc01c36887958140f2 307 PANTHER PTHR24220:SF336 7 276 3.3E-132 T 22-04-2016 SII_RS07580 71cbc63e766a9dfc01c36887958140f2 307 Gene3D G3DSA:3.40.50.300 2 258 1.6E-78 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS07580 71cbc63e766a9dfc01c36887958140f2 307 PANTHER PTHR24220 7 276 3.3E-132 T 22-04-2016 SII_RS07580 71cbc63e766a9dfc01c36887958140f2 307 ProSitePatterns PS00211 ABC transporters family signature. 151 165 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SII_RS07580 71cbc63e766a9dfc01c36887958140f2 307 Pfam PF00005 ABC transporter 25 178 7.0E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SII_RS07580 71cbc63e766a9dfc01c36887958140f2 307 SMART SM00382 34 228 1.6E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain SII_RS07580 71cbc63e766a9dfc01c36887958140f2 307 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 230 262 1.1E-7 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 SII_RS07580 71cbc63e766a9dfc01c36887958140f2 307 SUPERFAMILY SSF52540 5 250 1.29E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS08110 f495169471204ae72e7ad2c2aa20666c 216 PANTHER PTHR33238:SF1 1 216 1.9E-67 T 22-04-2016 SII_RS08110 f495169471204ae72e7ad2c2aa20666c 216 Gene3D G3DSA:1.10.60.10 72 135 2.6E-26 T 22-04-2016 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 SII_RS08110 f495169471204ae72e7ad2c2aa20666c 216 PANTHER PTHR33238 1 216 1.9E-67 T 22-04-2016 SII_RS08110 f495169471204ae72e7ad2c2aa20666c 216 SUPERFAMILY SSF46785 1 61 1.94E-12 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SII_RS08110 f495169471204ae72e7ad2c2aa20666c 216 SMART SM00529 23 123 2.1E-30 T 22-04-2016 IPR022689 Iron dependent repressor GO:0003700|GO:0006355|GO:0046914 SII_RS08110 f495169471204ae72e7ad2c2aa20666c 216 Pfam PF02742 Iron dependent repressor, metal binding and dimerisation domain 62 131 2.1E-22 T 22-04-2016 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 SII_RS08110 f495169471204ae72e7ad2c2aa20666c 216 Pfam PF01325 Iron dependent repressor, N-terminal DNA binding domain 2 57 1.9E-12 T 22-04-2016 IPR022687 DTXR-type HTH domain GO:0003677 SII_RS08110 f495169471204ae72e7ad2c2aa20666c 216 SMART SM00899 143 215 0.002 T 22-04-2016 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 SII_RS08110 f495169471204ae72e7ad2c2aa20666c 216 SUPERFAMILY SSF47979 62 139 2.22E-20 T 22-04-2016 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 SII_RS08110 f495169471204ae72e7ad2c2aa20666c 216 Gene3D G3DSA:1.10.10.10 1 71 1.0E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SII_RS08110 f495169471204ae72e7ad2c2aa20666c 216 Pfam PF04023 FeoA domain 144 214 2.7E-7 T 22-04-2016 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 SII_RS07655 e61c2304b0bc1a8ba6dc666fd72419da 378 PANTHER PTHR24078 2 355 2.9E-169 T 22-04-2016 SII_RS07655 e61c2304b0bc1a8ba6dc666fd72419da 378 SUPERFAMILY SSF57938 135 215 8.24E-20 T 22-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 SII_RS07655 e61c2304b0bc1a8ba6dc666fd72419da 378 Gene3D G3DSA:2.10.230.10 138 203 1.8E-21 T 22-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 SII_RS07655 e61c2304b0bc1a8ba6dc666fd72419da 378 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 5 355 7.5E-143 T 22-04-2016 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 SII_RS07655 e61c2304b0bc1a8ba6dc666fd72419da 378 ProSitePatterns PS00636 Nt-dnaJ domain signature. 46 65 - T 22-04-2016 IPR018253 DnaJ domain, conserved site SII_RS07655 e61c2304b0bc1a8ba6dc666fd72419da 378 Pfam PF00684 DnaJ central domain 148 212 2.5E-14 T 22-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 SII_RS07655 e61c2304b0bc1a8ba6dc666fd72419da 378 SUPERFAMILY SSF49493 264 348 2.75E-22 T 22-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 SII_RS07655 e61c2304b0bc1a8ba6dc666fd72419da 378 PRINTS PR00625 DnaJ domain signature 25 40 2.6E-31 T 22-04-2016 IPR001623 DnaJ domain SII_RS07655 e61c2304b0bc1a8ba6dc666fd72419da 378 PRINTS PR00625 DnaJ domain signature 61 80 2.6E-31 T 22-04-2016 IPR001623 DnaJ domain SII_RS07655 e61c2304b0bc1a8ba6dc666fd72419da 378 PRINTS PR00625 DnaJ domain signature 41 61 2.6E-31 T 22-04-2016 IPR001623 DnaJ domain SII_RS07655 e61c2304b0bc1a8ba6dc666fd72419da 378 PRINTS PR00625 DnaJ domain signature 7 25 2.6E-31 T 22-04-2016 IPR001623 DnaJ domain SII_RS07655 e61c2304b0bc1a8ba6dc666fd72419da 378 Pfam PF01556 DnaJ C terminal domain 121 338 1.6E-40 T 22-04-2016 IPR002939 Chaperone DnaJ, C-terminal SII_RS07655 e61c2304b0bc1a8ba6dc666fd72419da 378 Pfam PF00226 DnaJ domain 5 66 8.4E-26 T 22-04-2016 IPR001623 DnaJ domain SII_RS07655 e61c2304b0bc1a8ba6dc666fd72419da 378 PANTHER PTHR24078:SF190 2 355 2.9E-169 T 22-04-2016 SII_RS07655 e61c2304b0bc1a8ba6dc666fd72419da 378 Gene3D G3DSA:2.60.260.20 112 137 3.8E-23 T 22-04-2016 SII_RS07655 e61c2304b0bc1a8ba6dc666fd72419da 378 Gene3D G3DSA:2.60.260.20 204 259 3.8E-23 T 22-04-2016 SII_RS07655 e61c2304b0bc1a8ba6dc666fd72419da 378 Gene3D G3DSA:2.60.260.20 262 339 1.1E-21 T 22-04-2016 SII_RS07655 e61c2304b0bc1a8ba6dc666fd72419da 378 SUPERFAMILY SSF49493 218 268 8.5E-19 T 22-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 SII_RS07655 e61c2304b0bc1a8ba6dc666fd72419da 378 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 374 39.942 T 22-04-2016 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 SII_RS07655 e61c2304b0bc1a8ba6dc666fd72419da 378 Gene3D G3DSA:1.10.287.110 1 107 1.9E-37 T 22-04-2016 IPR001623 DnaJ domain SII_RS07655 e61c2304b0bc1a8ba6dc666fd72419da 378 SMART SM00271 4 61 7.0E-30 T 22-04-2016 IPR001623 DnaJ domain SII_RS07655 e61c2304b0bc1a8ba6dc666fd72419da 378 SUPERFAMILY SSF46565 1 105 2.09E-35 T 22-04-2016 IPR001623 DnaJ domain SII_RS07655 e61c2304b0bc1a8ba6dc666fd72419da 378 SUPERFAMILY SSF49493 115 139 8.5E-19 T 22-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 SII_RS01150 fe5b7794b918c0479cb216d554c96b09 338 Gene3D G3DSA:3.20.20.70 20 321 1.1E-107 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SII_RS01150 fe5b7794b918c0479cb216d554c96b09 338 Pfam PF01070 FMN-dependent dehydrogenase 159 317 2.3E-18 T 22-04-2016 IPR000262 FMN-dependent dehydrogenase GO:0016491 SII_RS01150 fe5b7794b918c0479cb216d554c96b09 338 SUPERFAMILY SSF51395 20 329 8.7E-69 T 22-04-2016 SII_RS01150 fe5b7794b918c0479cb216d554c96b09 338 PIRSF PIRSF003314 1 334 5.1E-105 T 22-04-2016 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent GO:0004452|GO:0005737|GO:0008299|GO:0010181 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922 SII_RS01150 fe5b7794b918c0479cb216d554c96b09 338 TIGRFAM TIGR02151 IPP_isom_2: isopentenyl-diphosphate delta-isomerase, type 2 4 323 1.7E-106 T 22-04-2016 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent GO:0004452|GO:0005737|GO:0008299|GO:0010181 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922 SII_RS01150 fe5b7794b918c0479cb216d554c96b09 338 Hamap MF_00354 Isopentenyl-diphosphate delta-isomerase [fni]. 2 324 32.54 T 22-04-2016 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent GO:0004452|GO:0005737|GO:0008299|GO:0010181 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922 SII_RS01150 fe5b7794b918c0479cb216d554c96b09 338 PANTHER PTHR10578:SF3 227 328 8.2E-98 T 22-04-2016 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent GO:0004452|GO:0005737|GO:0008299|GO:0010181 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922 SII_RS01150 fe5b7794b918c0479cb216d554c96b09 338 PANTHER PTHR10578:SF3 16 211 8.2E-98 T 22-04-2016 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent GO:0004452|GO:0005737|GO:0008299|GO:0010181 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922 SII_RS01150 fe5b7794b918c0479cb216d554c96b09 338 PANTHER PTHR10578 227 328 8.2E-98 T 22-04-2016 SII_RS01150 fe5b7794b918c0479cb216d554c96b09 338 PANTHER PTHR10578 16 211 8.2E-98 T 22-04-2016 SII_RS05960 69416998d5ff299e3e2ec4029d5eff20 716 TIGRFAM TIGR01193 bacteriocin_ABC: ABC-type bacteriocin transporter 10 715 0.0 T 22-04-2016 IPR005897 Peptidase C39, ABC-type bacteriocin transporter GO:0008234|GO:0016020|GO:0022885|GO:0043213 KEGG: 00900+3.4.22.- SII_RS05960 69416998d5ff299e3e2ec4029d5eff20 716 SUPERFAMILY SSF52540 478 715 3.59E-74 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS05960 69416998d5ff299e3e2ec4029d5eff20 716 ProSitePatterns PS00211 ABC transporters family signature. 620 634 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SII_RS05960 69416998d5ff299e3e2ec4029d5eff20 716 Gene3D G3DSA:3.40.50.300 483 710 7.2E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS05960 69416998d5ff299e3e2ec4029d5eff20 716 Pfam PF00664 ABC transporter transmembrane region 168 437 4.5E-55 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SII_RS05960 69416998d5ff299e3e2ec4029d5eff20 716 PANTHER PTHR24221 147 716 1.1E-161 T 22-04-2016 SII_RS05960 69416998d5ff299e3e2ec4029d5eff20 716 Pfam PF00005 ABC transporter 499 648 1.5E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SII_RS05960 69416998d5ff299e3e2ec4029d5eff20 716 SMART SM00382 508 699 2.7E-18 T 22-04-2016 IPR003593 AAA+ ATPase domain SII_RS05960 69416998d5ff299e3e2ec4029d5eff20 716 Pfam PF03412 Peptidase C39 family 6 141 1.6E-40 T 22-04-2016 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 SII_RS05960 69416998d5ff299e3e2ec4029d5eff20 716 SUPERFAMILY SSF90123 148 457 2.22E-61 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SII_RS05960 69416998d5ff299e3e2ec4029d5eff20 716 Gene3D G3DSA:1.20.1560.10 156 460 1.5E-71 T 22-04-2016 SII_RS05960 69416998d5ff299e3e2ec4029d5eff20 716 Gene3D G3DSA:3.90.70.10 12 140 2.6E-17 T 22-04-2016 SII_RS08070 6a61fc5871e1a1ad5b9cc96d47ec04e0 1464 Pfam PF11490 DNA polymerase III polC-type N-terminus II 92 206 2.7E-22 T 22-04-2016 IPR024754 DNA polymerase III polC-like, N-terminal domain II KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SII_RS08070 6a61fc5871e1a1ad5b9cc96d47ec04e0 1464 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 423 640 3.6E-39 T 22-04-2016 IPR006054 DNA polymerase III, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SII_RS08070 6a61fc5871e1a1ad5b9cc96d47ec04e0 1464 SUPERFAMILY SSF53098 425 890 2.12E-92 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SII_RS08070 6a61fc5871e1a1ad5b9cc96d47ec04e0 1464 Pfam PF14480 DNA polymerase III polC-type N-terminus I 5 71 2.2E-18 T 22-04-2016 IPR028112 DNA polymerase III polC-type, N-terminal domain I KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SII_RS08070 6a61fc5871e1a1ad5b9cc96d47ec04e0 1464 SMART SM00481 340 407 5.6E-27 T 22-04-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 SII_RS08070 6a61fc5871e1a1ad5b9cc96d47ec04e0 1464 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 840 1269 2.3E-91 T 22-04-2016 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SII_RS08070 6a61fc5871e1a1ad5b9cc96d47ec04e0 1464 SUPERFAMILY SSF50249 238 326 3.77E-10 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SII_RS08070 6a61fc5871e1a1ad5b9cc96d47ec04e0 1464 Pfam PF00929 Exonuclease 427 581 9.8E-33 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III SII_RS08070 6a61fc5871e1a1ad5b9cc96d47ec04e0 1464 Gene3D G3DSA:2.40.50.140 229 328 1.6E-6 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SII_RS08070 6a61fc5871e1a1ad5b9cc96d47ec04e0 1464 Hamap MF_00356 DNA polymerase III PolC-type [polC]. 1 1464 421.172 T 22-04-2016 IPR006308 DNA polymerase III, alpha subunit, Gram-positive type GO:0003677|GO:0003887|GO:0005737|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SII_RS08070 6a61fc5871e1a1ad5b9cc96d47ec04e0 1464 Pfam PF02811 PHP domain 341 700 4.0E-50 T 22-04-2016 IPR004013 PHP domain GO:0003824 SII_RS08070 6a61fc5871e1a1ad5b9cc96d47ec04e0 1464 Gene3D G3DSA:1.10.150.280 1397 1448 1.6E-6 T 22-04-2016 SII_RS08070 6a61fc5871e1a1ad5b9cc96d47ec04e0 1464 SMART SM00479 425 591 5.9E-44 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III SII_RS08070 6a61fc5871e1a1ad5b9cc96d47ec04e0 1464 TIGRFAM TIGR01405 polC_Gram_pos: DNA polymerase III, alpha subunit, Gram-positive type 235 1460 0.0 T 22-04-2016 IPR006308 DNA polymerase III, alpha subunit, Gram-positive type GO:0003677|GO:0003887|GO:0005737|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SII_RS08070 6a61fc5871e1a1ad5b9cc96d47ec04e0 1464 Gene3D G3DSA:3.20.20.140 338 421 2.1E-61 T 22-04-2016 SII_RS08070 6a61fc5871e1a1ad5b9cc96d47ec04e0 1464 Gene3D G3DSA:3.20.20.140 635 811 2.1E-61 T 22-04-2016 SII_RS08070 6a61fc5871e1a1ad5b9cc96d47ec04e0 1464 PANTHER PTHR23044:SF26 841 926 0.0 T 22-04-2016 SII_RS08070 6a61fc5871e1a1ad5b9cc96d47ec04e0 1464 PANTHER PTHR23044:SF26 944 1085 0.0 T 22-04-2016 SII_RS08070 6a61fc5871e1a1ad5b9cc96d47ec04e0 1464 PANTHER PTHR23044:SF26 1123 1436 0.0 T 22-04-2016 SII_RS08070 6a61fc5871e1a1ad5b9cc96d47ec04e0 1464 PANTHER PTHR23044:SF26 22 555 0.0 T 22-04-2016 SII_RS08070 6a61fc5871e1a1ad5b9cc96d47ec04e0 1464 PANTHER PTHR23044 841 926 0.0 T 22-04-2016 SII_RS08070 6a61fc5871e1a1ad5b9cc96d47ec04e0 1464 PANTHER PTHR23044 944 1085 0.0 T 22-04-2016 SII_RS08070 6a61fc5871e1a1ad5b9cc96d47ec04e0 1464 PANTHER PTHR23044 1123 1436 0.0 T 22-04-2016 SII_RS08070 6a61fc5871e1a1ad5b9cc96d47ec04e0 1464 PANTHER PTHR23044 22 555 0.0 T 22-04-2016 SII_RS08070 6a61fc5871e1a1ad5b9cc96d47ec04e0 1464 Gene3D G3DSA:3.30.420.10 422 595 1.5E-57 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SII_RS02785 acf934bb282b8d269e9aec526ce84e9d 186 PANTHER PTHR41266 1 182 1.6E-56 T 22-04-2016 SII_RS02785 acf934bb282b8d269e9aec526ce84e9d 186 SMART SM01118 3 186 8.9E-19 T 22-04-2016 IPR023577 CYTH domain SII_RS02785 acf934bb282b8d269e9aec526ce84e9d 186 PIRSF PIRSF012526 1 186 3.3E-69 T 22-04-2016 IPR009195 Uncharacterised protein family YjbK KEGG: 00230+3.6.1.-|KEGG: 00332+3.6.1.-|KEGG: 00790+3.6.1.- SII_RS02785 acf934bb282b8d269e9aec526ce84e9d 186 SUPERFAMILY SSF55154 2 183 3.11E-27 T 22-04-2016 IPR033469 CYTH-like domain SII_RS02785 acf934bb282b8d269e9aec526ce84e9d 186 Gene3D G3DSA:2.40.320.10 4 171 6.9E-14 T 22-04-2016 IPR023577 CYTH domain SII_RS02785 acf934bb282b8d269e9aec526ce84e9d 186 Pfam PF01928 CYTH domain 4 182 6.6E-29 T 22-04-2016 IPR023577 CYTH domain SII_RS01490 e0160229f3ee1f2aeec1b68b16ae1f7b 79 PANTHER PTHR13479 10 79 1.1E-32 T 22-04-2016 SII_RS01490 e0160229f3ee1f2aeec1b68b16ae1f7b 79 Pfam PF01084 Ribosomal protein S18 22 73 7.6E-29 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SII_RS01490 e0160229f3ee1f2aeec1b68b16ae1f7b 79 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 6 78 22.528 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SII_RS01490 e0160229f3ee1f2aeec1b68b16ae1f7b 79 SUPERFAMILY SSF46911 6 78 2.75E-30 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SII_RS01490 e0160229f3ee1f2aeec1b68b16ae1f7b 79 PRINTS PR00974 Ribosomal protein S18 family signature 33 43 8.7E-21 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SII_RS01490 e0160229f3ee1f2aeec1b68b16ae1f7b 79 PRINTS PR00974 Ribosomal protein S18 family signature 43 50 8.7E-21 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SII_RS01490 e0160229f3ee1f2aeec1b68b16ae1f7b 79 PRINTS PR00974 Ribosomal protein S18 family signature 51 65 8.7E-21 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SII_RS01490 e0160229f3ee1f2aeec1b68b16ae1f7b 79 PRINTS PR00974 Ribosomal protein S18 family signature 65 75 8.7E-21 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SII_RS01490 e0160229f3ee1f2aeec1b68b16ae1f7b 79 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 25 78 4.0E-25 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SII_RS01490 e0160229f3ee1f2aeec1b68b16ae1f7b 79 TIGRFAM TIGR00165 S18: ribosomal protein bS18 9 77 1.7E-31 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SII_RS01490 e0160229f3ee1f2aeec1b68b16ae1f7b 79 Gene3D G3DSA:4.10.640.10 13 78 8.0E-34 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SII_RS01490 e0160229f3ee1f2aeec1b68b16ae1f7b 79 ProSitePatterns PS00057 Ribosomal protein S18 signature. 26 49 - T 22-04-2016 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SII_RS06345 48aca68ca38a100845e1085939576aed 884 Gene3D G3DSA:2.70.150.10 125 241 1.2E-38 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 SII_RS06345 48aca68ca38a100845e1085939576aed 884 Gene3D G3DSA:2.70.150.10 27 63 1.2E-38 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 SII_RS06345 48aca68ca38a100845e1085939576aed 884 SMART SM00831 10 83 4.8E-4 T 22-04-2016 IPR004014 Cation-transporting P-type ATPase, N-terminal SII_RS06345 48aca68ca38a100845e1085939576aed 884 Pfam PF00122 E1-E2 ATPase 97 332 2.5E-53 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 SII_RS06345 48aca68ca38a100845e1085939576aed 884 PRINTS PR01836 Magnesium-transporting ATPase signature 672 687 1.5E-64 T 22-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 SII_RS06345 48aca68ca38a100845e1085939576aed 884 PRINTS PR01836 Magnesium-transporting ATPase signature 722 735 1.5E-64 T 22-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 SII_RS06345 48aca68ca38a100845e1085939576aed 884 PRINTS PR01836 Magnesium-transporting ATPase signature 254 270 1.5E-64 T 22-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 SII_RS06345 48aca68ca38a100845e1085939576aed 884 PRINTS PR01836 Magnesium-transporting ATPase signature 375 388 1.5E-64 T 22-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 SII_RS06345 48aca68ca38a100845e1085939576aed 884 PRINTS PR01836 Magnesium-transporting ATPase signature 742 758 1.5E-64 T 22-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 SII_RS06345 48aca68ca38a100845e1085939576aed 884 PRINTS PR01836 Magnesium-transporting ATPase signature 690 701 1.5E-64 T 22-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 SII_RS06345 48aca68ca38a100845e1085939576aed 884 PRINTS PR01836 Magnesium-transporting ATPase signature 271 290 1.5E-64 T 22-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 SII_RS06345 48aca68ca38a100845e1085939576aed 884 PRINTS PR01836 Magnesium-transporting ATPase signature 787 808 1.5E-64 T 22-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 SII_RS06345 48aca68ca38a100845e1085939576aed 884 PRINTS PR01836 Magnesium-transporting ATPase signature 837 858 1.5E-64 T 22-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 SII_RS06345 48aca68ca38a100845e1085939576aed 884 SUPERFAMILY SSF81653 131 240 8.63E-27 T 22-04-2016 SII_RS06345 48aca68ca38a100845e1085939576aed 884 Pfam PF00690 Cation transporter/ATPase, N-terminus 14 78 1.3E-11 T 22-04-2016 IPR004014 Cation-transporting P-type ATPase, N-terminal SII_RS06345 48aca68ca38a100845e1085939576aed 884 SUPERFAMILY SSF81665 242 335 4.84E-98 T 22-04-2016 SII_RS06345 48aca68ca38a100845e1085939576aed 884 SUPERFAMILY SSF81665 11 130 4.84E-98 T 22-04-2016 SII_RS06345 48aca68ca38a100845e1085939576aed 884 SUPERFAMILY SSF81665 663 880 4.84E-98 T 22-04-2016 SII_RS06345 48aca68ca38a100845e1085939576aed 884 PANTHER PTHR24093 6 883 0.0 T 22-04-2016 SII_RS06345 48aca68ca38a100845e1085939576aed 884 Gene3D G3DSA:3.40.1110.10 333 521 9.3E-34 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 SII_RS06345 48aca68ca38a100845e1085939576aed 884 Pfam PF00689 Cation transporting ATPase, C-terminus 697 873 2.2E-13 T 22-04-2016 IPR006068 Cation-transporting P-type ATPase, C-terminal SII_RS06345 48aca68ca38a100845e1085939576aed 884 PANTHER PTHR24093:SF128 6 883 0.0 T 22-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 SII_RS06345 48aca68ca38a100845e1085939576aed 884 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 343 349 - T 22-04-2016 IPR018303 P-type ATPase, phosphorylation site SII_RS06345 48aca68ca38a100845e1085939576aed 884 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 582 703 4.6E-27 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 SII_RS06345 48aca68ca38a100845e1085939576aed 884 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 232 355 6.6E-19 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 SII_RS06345 48aca68ca38a100845e1085939576aed 884 SUPERFAMILY SSF56784 339 359 1.69E-41 T 22-04-2016 IPR023214 HAD-like domain SII_RS06345 48aca68ca38a100845e1085939576aed 884 SUPERFAMILY SSF56784 470 713 1.69E-41 T 22-04-2016 IPR023214 HAD-like domain SII_RS06345 48aca68ca38a100845e1085939576aed 884 Pfam PF00702 haloacid dehalogenase-like hydrolase 337 628 1.7E-20 T 22-04-2016 SII_RS06345 48aca68ca38a100845e1085939576aed 884 Gene3D G3DSA:1.20.1110.10 64 124 2.4E-68 T 22-04-2016 IPR023298 P-type ATPase, transmembrane domain SII_RS06345 48aca68ca38a100845e1085939576aed 884 Gene3D G3DSA:1.20.1110.10 583 875 2.4E-68 T 22-04-2016 IPR023298 P-type ATPase, transmembrane domain SII_RS06345 48aca68ca38a100845e1085939576aed 884 TIGRFAM TIGR01524 ATPase-IIIB_Mg: magnesium-translocating P-type ATPase 4 883 0.0 T 22-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 SII_RS09375 0728437c0df61570800462c7df4df0d7 90 Pfam PF06257 Biofilm formation stimulator VEG 10 86 1.1E-25 T 22-04-2016 IPR009366 Protein Veg GO:0042710 SII_RS09375 0728437c0df61570800462c7df4df0d7 90 PANTHER PTHR40026 6 90 3.2E-24 T 22-04-2016 SII_RS09375 0728437c0df61570800462c7df4df0d7 90 PANTHER PTHR40026:SF1 6 90 3.2E-24 T 22-04-2016 IPR009366 Protein Veg GO:0042710 SII_RS09375 0728437c0df61570800462c7df4df0d7 90 PIRSF PIRSF037257 1 90 1.1E-27 T 22-04-2016 IPR009366 Protein Veg GO:0042710 SII_RS09375 0728437c0df61570800462c7df4df0d7 90 Gene3D G3DSA:2.30.30.100 1 89 2.5E-31 T 22-04-2016 SII_RS02185 aebf2a2796604773e67e3d5993678b66 2222 Gene3D G3DSA:2.60.120.260 87 256 8.1E-43 T 22-04-2016 IPR008979 Galactose-binding domain-like SII_RS02185 aebf2a2796604773e67e3d5993678b66 2222 Gene3D G3DSA:2.60.40.320 257 392 4.5E-28 T 22-04-2016 IPR013812 Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain GO:0004553|GO:0005975 SII_RS02185 aebf2a2796604773e67e3d5993678b66 2222 SUPERFAMILY SSF49785 109 266 7.9E-44 T 22-04-2016 IPR008979 Galactose-binding domain-like SII_RS02185 aebf2a2796604773e67e3d5993678b66 2222 SUPERFAMILY SSF49785 1411 1533 3.9E-24 T 22-04-2016 IPR008979 Galactose-binding domain-like SII_RS02185 aebf2a2796604773e67e3d5993678b66 2222 Gene3D G3DSA:3.20.20.80 398 737 8.0E-69 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 SII_RS02185 aebf2a2796604773e67e3d5993678b66 2222 PRINTS PR00132 Glycosyl hydrolase family 2 signature 524 539 1.2E-6 T 22-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 SII_RS02185 aebf2a2796604773e67e3d5993678b66 2222 PRINTS PR00132 Glycosyl hydrolase family 2 signature 403 417 1.2E-6 T 22-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 SII_RS02185 aebf2a2796604773e67e3d5993678b66 2222 PRINTS PR00132 Glycosyl hydrolase family 2 signature 434 452 1.2E-6 T 22-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 SII_RS02185 aebf2a2796604773e67e3d5993678b66 2222 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 119 266 2.9E-25 T 22-04-2016 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 SII_RS02185 aebf2a2796604773e67e3d5993678b66 2222 Pfam PF07532 Bacterial Ig-like domain (group 4) 1059 1114 9.0E-6 T 22-04-2016 IPR011081 Bacterial Ig-related KEGG: 00511+3.2.1.18|KEGG: 00600+3.2.1.18 SII_RS02185 aebf2a2796604773e67e3d5993678b66 2222 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 401 702 8.6E-22 T 22-04-2016 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 SII_RS02185 aebf2a2796604773e67e3d5993678b66 2222 Gene3D G3DSA:2.60.40.1560 755 847 3.7E-8 T 22-04-2016 SII_RS02185 aebf2a2796604773e67e3d5993678b66 2222 SUPERFAMILY SSF51445 1645 1967 3.42E-58 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily SII_RS02185 aebf2a2796604773e67e3d5993678b66 2222 SUPERFAMILY SSF51445 665 736 8.24E-57 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily SII_RS02185 aebf2a2796604773e67e3d5993678b66 2222 SUPERFAMILY SSF51445 398 637 8.24E-57 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily SII_RS02185 aebf2a2796604773e67e3d5993678b66 2222 PANTHER PTHR10066:SF71 506 576 3.9E-146 T 22-04-2016 SII_RS02185 aebf2a2796604773e67e3d5993678b66 2222 PANTHER PTHR10066:SF71 117 480 3.9E-146 T 22-04-2016 SII_RS02185 aebf2a2796604773e67e3d5993678b66 2222 PANTHER PTHR10066:SF71 673 780 3.9E-146 T 22-04-2016 SII_RS02185 aebf2a2796604773e67e3d5993678b66 2222 PANTHER PTHR10066:SF71 600 650 3.9E-146 T 22-04-2016 SII_RS02185 aebf2a2796604773e67e3d5993678b66 2222 PANTHER PTHR10066 506 576 3.9E-146 T 22-04-2016 SII_RS02185 aebf2a2796604773e67e3d5993678b66 2222 PANTHER PTHR10066 117 480 3.9E-146 T 22-04-2016 SII_RS02185 aebf2a2796604773e67e3d5993678b66 2222 PANTHER PTHR10066 673 780 3.9E-146 T 22-04-2016 SII_RS02185 aebf2a2796604773e67e3d5993678b66 2222 PANTHER PTHR10066 600 650 3.9E-146 T 22-04-2016 SII_RS02185 aebf2a2796604773e67e3d5993678b66 2222 Pfam PF16355 Domain of unknown function (DUF4982) 758 844 3.2E-12 T 22-04-2016 IPR032311 Domain of unknown function DUF4982 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 SII_RS02185 aebf2a2796604773e67e3d5993678b66 2222 Gene3D G3DSA:2.60.120.260 1398 1534 5.7E-25 T 22-04-2016 IPR008979 Galactose-binding domain-like SII_RS02185 aebf2a2796604773e67e3d5993678b66 2222 Gene3D G3DSA:2.60.120.260 1163 1301 6.0E-4 T 22-04-2016 IPR008979 Galactose-binding domain-like SII_RS02185 aebf2a2796604773e67e3d5993678b66 2222 Gene3D G3DSA:3.20.20.80 1644 1969 2.2E-52 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 SII_RS02185 aebf2a2796604773e67e3d5993678b66 2222 Pfam PF00703 Glycosyl hydrolases family 2 290 391 5.1E-14 T 22-04-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 SII_RS02185 aebf2a2796604773e67e3d5993678b66 2222 SUPERFAMILY SSF49303 290 391 7.19E-13 T 22-04-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 SII_RS02185 aebf2a2796604773e67e3d5993678b66 2222 Pfam PF00728 Glycosyl hydrolase family 20, catalytic domain 1644 1921 3.1E-22 T 22-04-2016 IPR015883 Glycoside hydrolase family 20, catalytic domain GO:0004553|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 SII_RS07300 e0608f839c8105297920f05a4f3ebc68 230 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 47 228 3.6E-11 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SII_RS07300 e0608f839c8105297920f05a4f3ebc68 230 PANTHER PTHR30450 25 230 3.6E-76 T 22-04-2016 SII_RS07300 e0608f839c8105297920f05a4f3ebc68 230 PANTHER PTHR30450:SF1 25 230 3.6E-76 T 22-04-2016 SII_RS07300 e0608f839c8105297920f05a4f3ebc68 230 SUPERFAMILY SSF161098 23 220 2.75E-32 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SII_RS07300 e0608f839c8105297920f05a4f3ebc68 230 Gene3D G3DSA:1.10.3720.10 21 229 4.3E-27 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SII_RS04865 68524821cbc56c5469833a9e5e1ae57f 156 SUPERFAMILY SSF55811 9 132 1.15E-25 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SII_RS04865 68524821cbc56c5469833a9e5e1ae57f 156 ProSitePatterns PS00893 Nudix box signature. 37 58 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 SII_RS04865 68524821cbc56c5469833a9e5e1ae57f 156 PANTHER PTHR22769 11 129 3.9E-19 T 22-04-2016 SII_RS04865 68524821cbc56c5469833a9e5e1ae57f 156 Gene3D G3DSA:3.90.79.10 9 152 5.5E-34 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SII_RS04865 68524821cbc56c5469833a9e5e1ae57f 156 PRINTS PR00502 NUDIX hydrolase family signature 32 46 9.9E-5 T 22-04-2016 IPR020476 NUDIX hydrolase SII_RS04865 68524821cbc56c5469833a9e5e1ae57f 156 PRINTS PR00502 NUDIX hydrolase family signature 46 61 9.9E-5 T 22-04-2016 IPR020476 NUDIX hydrolase SII_RS04865 68524821cbc56c5469833a9e5e1ae57f 156 Pfam PF00293 NUDIX domain 15 119 9.5E-16 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 SII_RS06460 116e6278fc5d14d99fb5d6405c1fc00c 424 ProSitePatterns PS01134 FtsZ protein signature 1. 45 79 - T 22-04-2016 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 SII_RS06460 116e6278fc5d14d99fb5d6405c1fc00c 424 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 10 416 37.631 T 22-04-2016 IPR000158 Cell division protein FtsZ GO:0005525 SII_RS06460 116e6278fc5d14d99fb5d6405c1fc00c 424 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 10 332 2.4E-125 T 22-04-2016 IPR000158 Cell division protein FtsZ GO:0005525 SII_RS06460 116e6278fc5d14d99fb5d6405c1fc00c 424 PANTHER PTHR30314:SF3 1 398 8.6E-183 T 22-04-2016 SII_RS06460 116e6278fc5d14d99fb5d6405c1fc00c 424 PRINTS PR00423 Cell division protein FtsZ signature 99 119 7.3E-51 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 SII_RS06460 116e6278fc5d14d99fb5d6405c1fc00c 424 PRINTS PR00423 Cell division protein FtsZ signature 213 234 7.3E-51 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 SII_RS06460 116e6278fc5d14d99fb5d6405c1fc00c 424 PRINTS PR00423 Cell division protein FtsZ signature 127 148 7.3E-51 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 SII_RS06460 116e6278fc5d14d99fb5d6405c1fc00c 424 PRINTS PR00423 Cell division protein FtsZ signature 190 212 7.3E-51 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 SII_RS06460 116e6278fc5d14d99fb5d6405c1fc00c 424 SUPERFAMILY SSF52490 14 209 1.83E-67 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 SII_RS06460 116e6278fc5d14d99fb5d6405c1fc00c 424 Pfam PF12327 FtsZ family, C-terminal domain 223 316 9.1E-29 T 22-04-2016 IPR024757 Cell division protein FtsZ, C-terminal SII_RS06460 116e6278fc5d14d99fb5d6405c1fc00c 424 Gene3D G3DSA:3.40.50.1440 15 215 2.6E-91 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 SII_RS06460 116e6278fc5d14d99fb5d6405c1fc00c 424 Gene3D G3DSA:3.30.1330.20 216 322 1.6E-44 T 22-04-2016 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain SII_RS06460 116e6278fc5d14d99fb5d6405c1fc00c 424 SUPERFAMILY SSF55307 205 321 2.29E-41 T 22-04-2016 IPR008280 Tubulin/FtsZ, C-terminal SII_RS06460 116e6278fc5d14d99fb5d6405c1fc00c 424 PANTHER PTHR30314 1 398 8.6E-183 T 22-04-2016 SII_RS06460 116e6278fc5d14d99fb5d6405c1fc00c 424 SMART SM00865 208 325 1.4E-46 T 22-04-2016 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain SII_RS06460 116e6278fc5d14d99fb5d6405c1fc00c 424 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 15 174 7.9E-40 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 SII_RS06460 116e6278fc5d14d99fb5d6405c1fc00c 424 SMART SM00864 14 206 9.3E-110 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 SII_RS03795 8929c64be3084246e8b4af6e8adc8c09 149 SMART SM00347 20 120 2.1E-16 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SII_RS03795 8929c64be3084246e8b4af6e8adc8c09 149 Pfam PF01047 MarR family 30 76 1.2E-11 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SII_RS03795 8929c64be3084246e8b4af6e8adc8c09 149 PANTHER PTHR18964:SF122 17 143 6.8E-21 T 22-04-2016 SII_RS03795 8929c64be3084246e8b4af6e8adc8c09 149 PANTHER PTHR18964 17 143 6.8E-21 T 22-04-2016 SII_RS03795 8929c64be3084246e8b4af6e8adc8c09 149 PRINTS PR00598 Bacterial regulatory protein MarR family signature 80 96 2.4E-13 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SII_RS03795 8929c64be3084246e8b4af6e8adc8c09 149 PRINTS PR00598 Bacterial regulatory protein MarR family signature 44 60 2.4E-13 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SII_RS03795 8929c64be3084246e8b4af6e8adc8c09 149 PRINTS PR00598 Bacterial regulatory protein MarR family signature 61 76 2.4E-13 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SII_RS03795 8929c64be3084246e8b4af6e8adc8c09 149 PRINTS PR00598 Bacterial regulatory protein MarR family signature 110 130 2.4E-13 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SII_RS03795 8929c64be3084246e8b4af6e8adc8c09 149 SUPERFAMILY SSF46785 4 139 4.4E-29 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SII_RS03795 8929c64be3084246e8b4af6e8adc8c09 149 Gene3D G3DSA:1.10.10.10 3 138 3.9E-31 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SII_RS02375 2b81334b24ee0b27d48f59be59ddc40f 237 PANTHER PTHR11410 1 237 2.1E-60 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 SII_RS02375 2b81334b24ee0b27d48f59be59ddc40f 237 Hamap MF_01393 ATP synthase subunit a [atpB]. 1 236 13.177 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 SII_RS02375 2b81334b24ee0b27d48f59be59ddc40f 237 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 16 232 1.4E-42 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 SII_RS02375 2b81334b24ee0b27d48f59be59ddc40f 237 PRINTS PR00123 ATP synthase A subunit signature 163 185 1.2E-20 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 SII_RS02375 2b81334b24ee0b27d48f59be59ddc40f 237 PRINTS PR00123 ATP synthase A subunit signature 147 162 1.2E-20 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 SII_RS02375 2b81334b24ee0b27d48f59be59ddc40f 237 PRINTS PR00123 ATP synthase A subunit signature 216 231 1.2E-20 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 SII_RS02375 2b81334b24ee0b27d48f59be59ddc40f 237 PRINTS PR00123 ATP synthase A subunit signature 79 95 1.2E-20 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 SII_RS02375 2b81334b24ee0b27d48f59be59ddc40f 237 Gene3D G3DSA:1.20.120.220 71 235 1.5E-38 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 SII_RS02375 2b81334b24ee0b27d48f59be59ddc40f 237 Pfam PF00119 ATP synthase A chain 22 229 1.5E-48 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 SII_RS02375 2b81334b24ee0b27d48f59be59ddc40f 237 SUPERFAMILY SSF81336 71 229 1.44E-36 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 SII_RS02375 2b81334b24ee0b27d48f59be59ddc40f 237 PANTHER PTHR11410:SF7 1 237 2.1E-60 T 22-04-2016 SII_RS05940 3861ea78083ad8a8a84bed192a36cab2 248 Gene3D G3DSA:3.40.50.2300 1 129 3.7E-18 T 22-04-2016 SII_RS05940 3861ea78083ad8a8a84bed192a36cab2 248 SUPERFAMILY SSF52172 1 135 4.41E-14 T 22-04-2016 IPR011006 CheY-like superfamily SII_RS05940 3861ea78083ad8a8a84bed192a36cab2 248 Gene3D G3DSA:2.40.50.40 139 206 3.8E-16 T 22-04-2016 SII_RS05940 3861ea78083ad8a8a84bed192a36cab2 248 SMART SM00850 148 242 3.3E-20 T 22-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 SII_RS05940 3861ea78083ad8a8a84bed192a36cab2 248 PANTHER PTHR26402 1 126 7.0E-45 T 22-04-2016 SII_RS05940 3861ea78083ad8a8a84bed192a36cab2 248 Pfam PF00072 Response regulator receiver domain 3 123 9.1E-14 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SII_RS05940 3861ea78083ad8a8a84bed192a36cab2 248 Pfam PF04397 LytTr DNA-binding domain 151 241 5.3E-22 T 22-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 SII_RS05940 3861ea78083ad8a8a84bed192a36cab2 248 SMART SM00448 1 122 3.6E-15 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SII_RS05940 3861ea78083ad8a8a84bed192a36cab2 248 PANTHER PTHR26402:SF577 1 126 7.0E-45 T 22-04-2016 SII_RS05595 6d427191bc9f787771e2ef6aef8403f0 814 PANTHER PTHR30191:SF6 5 814 0.0 T 22-04-2016 SII_RS05595 6d427191bc9f787771e2ef6aef8403f0 814 Pfam PF02901 Pyruvate formate lyase-like 21 675 2.2E-212 T 22-04-2016 IPR004184 Pyruvate formate lyase domain GO:0003824 SII_RS05595 6d427191bc9f787771e2ef6aef8403f0 814 SUPERFAMILY SSF51998 18 813 3.66E-235 T 22-04-2016 SII_RS05595 6d427191bc9f787771e2ef6aef8403f0 814 ProSitePatterns PS00850 Glycine radical domain signature. 785 793 - T 22-04-2016 IPR019777 Formate C-acetyltransferase glycine radical, conserved site SII_RS05595 6d427191bc9f787771e2ef6aef8403f0 814 Pfam PF01228 Glycine radical 692 796 8.1E-32 T 22-04-2016 IPR001150 Glycine radical domain GO:0003824|GO:0008152 SII_RS05595 6d427191bc9f787771e2ef6aef8403f0 814 TIGRFAM TIGR01774 PFL2-3: glycyl radical enzyme, PFL2/glycerol dehydratase family 20 814 4.9E-279 T 22-04-2016 IPR010098 Glycyl radical enzyme, PFL2/glycerol dehydratase family KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493|UniPathway: UPA00920 SII_RS05595 6d427191bc9f787771e2ef6aef8403f0 814 Gene3D G3DSA:3.20.70.20 6 813 2.6E-280 T 22-04-2016 SII_RS05595 6d427191bc9f787771e2ef6aef8403f0 814 PANTHER PTHR30191 5 814 0.0 T 22-04-2016 SII_RS08515 552e11650b9cc5c4c41e7e7ecfd7e58f 487 PANTHER PTHR11451 430 457 2.1E-97 T 22-04-2016 SII_RS08515 552e11650b9cc5c4c41e7e7ecfd7e58f 487 PANTHER PTHR11451 5 249 2.1E-97 T 22-04-2016 SII_RS08515 552e11650b9cc5c4c41e7e7ecfd7e58f 487 PANTHER PTHR11451 265 333 2.1E-97 T 22-04-2016 SII_RS08515 552e11650b9cc5c4c41e7e7ecfd7e58f 487 Gene3D G3DSA:1.10.10.350 384 483 7.5E-19 T 22-04-2016 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 SII_RS08515 552e11650b9cc5c4c41e7e7ecfd7e58f 487 Gene3D G3DSA:1.10.1160.10 253 337 2.2E-33 T 22-04-2016 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: REACT_71 SII_RS08515 552e11650b9cc5c4c41e7e7ecfd7e58f 487 Hamap MF_00022_B Glutamate--tRNA ligase [gltX]. 7 483 33.803 T 22-04-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 SII_RS08515 552e11650b9cc5c4c41e7e7ecfd7e58f 487 PANTHER PTHR11451:SF41 430 457 2.1E-97 T 22-04-2016 SII_RS08515 552e11650b9cc5c4c41e7e7ecfd7e58f 487 PANTHER PTHR11451:SF41 5 249 2.1E-97 T 22-04-2016 SII_RS08515 552e11650b9cc5c4c41e7e7ecfd7e58f 487 PANTHER PTHR11451:SF41 265 333 2.1E-97 T 22-04-2016 SII_RS08515 552e11650b9cc5c4c41e7e7ecfd7e58f 487 SUPERFAMILY SSF48163 303 482 1.23E-41 T 22-04-2016 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 SII_RS08515 552e11650b9cc5c4c41e7e7ecfd7e58f 487 PRINTS PR00987 Glutamyl-tRNA synthetase signature 198 208 5.3E-28 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 SII_RS08515 552e11650b9cc5c4c41e7e7ecfd7e58f 487 PRINTS PR00987 Glutamyl-tRNA synthetase signature 10 22 5.3E-28 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 SII_RS08515 552e11650b9cc5c4c41e7e7ecfd7e58f 487 PRINTS PR00987 Glutamyl-tRNA synthetase signature 24 35 5.3E-28 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 SII_RS08515 552e11650b9cc5c4c41e7e7ecfd7e58f 487 PRINTS PR00987 Glutamyl-tRNA synthetase signature 214 222 5.3E-28 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 SII_RS08515 552e11650b9cc5c4c41e7e7ecfd7e58f 487 PRINTS PR00987 Glutamyl-tRNA synthetase signature 39 52 5.3E-28 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 SII_RS08515 552e11650b9cc5c4c41e7e7ecfd7e58f 487 Gene3D G3DSA:3.90.800.10 72 199 3.8E-33 T 22-04-2016 SII_RS08515 552e11650b9cc5c4c41e7e7ecfd7e58f 487 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 6 328 6.6E-115 T 22-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 SII_RS08515 552e11650b9cc5c4c41e7e7ecfd7e58f 487 Gene3D G3DSA:3.40.50.620 200 249 4.9E-52 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SII_RS08515 552e11650b9cc5c4c41e7e7ecfd7e58f 487 Gene3D G3DSA:3.40.50.620 6 71 4.9E-52 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SII_RS08515 552e11650b9cc5c4c41e7e7ecfd7e58f 487 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 13 24 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SII_RS08515 552e11650b9cc5c4c41e7e7ecfd7e58f 487 SUPERFAMILY SSF52374 7 321 1.77E-104 T 22-04-2016 SII_RS08515 552e11650b9cc5c4c41e7e7ecfd7e58f 487 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 6 484 2.0E-170 T 22-04-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 SII_RS05625 355dbcc927a35b6cc0e903ffa9d060c5 258 Gene3D G3DSA:3.80.30.10 84 257 7.5E-55 T 22-04-2016 SII_RS05625 355dbcc927a35b6cc0e903ffa9d060c5 258 PANTHER PTHR30352:SF4 1 255 1.0E-109 T 22-04-2016 SII_RS05625 355dbcc927a35b6cc0e903ffa9d060c5 258 TIGRFAM TIGR02494 PFLE_PFLC: glycyl-radical enzyme activating protein 60 251 5.0E-60 T 22-04-2016 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 SII_RS05625 355dbcc927a35b6cc0e903ffa9d060c5 258 Pfam PF04055 Radical SAM superfamily 26 194 2.4E-26 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 SII_RS05625 355dbcc927a35b6cc0e903ffa9d060c5 258 ProSitePatterns PS01087 Radical activating enzymes signature. 19 40 - T 22-04-2016 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 SII_RS05625 355dbcc927a35b6cc0e903ffa9d060c5 258 Pfam PF13353 4Fe-4S single cluster domain 18 140 1.6E-14 T 22-04-2016 SII_RS05625 355dbcc927a35b6cc0e903ffa9d060c5 258 SUPERFAMILY SSF102114 28 232 7.32E-21 T 22-04-2016 SII_RS05625 355dbcc927a35b6cc0e903ffa9d060c5 258 PANTHER PTHR30352 1 255 1.0E-109 T 22-04-2016 SII_RS07500 b531a669775c7174d0c139f9f803b57d 91 TIGRFAM TIGR04197 T7SS_SACOL2603: type VII secretion effector, TIGR04197 family 4 88 3.3E-26 T 22-04-2016 IPR021477 Type VII secretion effector, SACOL2603 family SII_RS03565 33f8f56d09e39cbed06c939b8824ac2e 288 SUPERFAMILY SSF54211 1 143 3.79E-30 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SII_RS03565 33f8f56d09e39cbed06c939b8824ac2e 288 Gene3D G3DSA:3.30.230.10 1 143 6.7E-44 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SII_RS03565 33f8f56d09e39cbed06c939b8824ac2e 288 PRINTS PR00958 Homoserine kinase signature 8 23 3.0E-39 T 22-04-2016 SII_RS03565 33f8f56d09e39cbed06c939b8824ac2e 288 PRINTS PR00958 Homoserine kinase signature 157 174 3.0E-39 T 22-04-2016 SII_RS03565 33f8f56d09e39cbed06c939b8824ac2e 288 PRINTS PR00958 Homoserine kinase signature 85 100 3.0E-39 T 22-04-2016 SII_RS03565 33f8f56d09e39cbed06c939b8824ac2e 288 PRINTS PR00958 Homoserine kinase signature 237 252 3.0E-39 T 22-04-2016 SII_RS03565 33f8f56d09e39cbed06c939b8824ac2e 288 PRINTS PR00958 Homoserine kinase signature 119 132 3.0E-39 T 22-04-2016 SII_RS03565 33f8f56d09e39cbed06c939b8824ac2e 288 Gene3D G3DSA:3.30.70.890 150 282 2.6E-37 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain SII_RS03565 33f8f56d09e39cbed06c939b8824ac2e 288 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 78 89 - T 22-04-2016 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 SII_RS03565 33f8f56d09e39cbed06c939b8824ac2e 288 PIRSF PIRSF000676 1 288 6.9E-88 T 22-04-2016 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702|UniPathway: UPA00050 SII_RS03565 33f8f56d09e39cbed06c939b8824ac2e 288 TIGRFAM TIGR00191 thrB: homoserine kinase 2 288 4.0E-74 T 22-04-2016 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702|UniPathway: UPA00050 SII_RS03565 33f8f56d09e39cbed06c939b8824ac2e 288 Pfam PF00288 GHMP kinases N terminal domain 71 132 4.7E-14 T 22-04-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 SII_RS03565 33f8f56d09e39cbed06c939b8824ac2e 288 PANTHER PTHR20861:SF1 1 287 3.1E-88 T 22-04-2016 SII_RS03565 33f8f56d09e39cbed06c939b8824ac2e 288 Hamap MF_00384 Homoserine kinase [thrB]. 1 286 31.557 T 22-04-2016 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702|UniPathway: UPA00050 SII_RS03565 33f8f56d09e39cbed06c939b8824ac2e 288 Pfam PF08544 GHMP kinases C terminal 195 267 5.2E-5 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain SII_RS03565 33f8f56d09e39cbed06c939b8824ac2e 288 PANTHER PTHR20861 1 287 3.1E-88 T 22-04-2016 SII_RS03565 33f8f56d09e39cbed06c939b8824ac2e 288 SUPERFAMILY SSF55060 153 269 1.14E-30 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain SII_RS04990 c1f258c370e22c2060bb39aae2d0713d 447 SMART SM00388 228 293 5.4E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SII_RS04990 c1f258c370e22c2060bb39aae2d0713d 447 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 341 445 1.3E-5 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SII_RS04990 c1f258c370e22c2060bb39aae2d0713d 447 SUPERFAMILY SSF55874 315 445 5.5E-16 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SII_RS04990 c1f258c370e22c2060bb39aae2d0713d 447 SUPERFAMILY SSF47384 227 290 6.67E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SII_RS04990 c1f258c370e22c2060bb39aae2d0713d 447 Gene3D G3DSA:3.30.565.10 302 445 1.8E-15 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SII_RS04990 c1f258c370e22c2060bb39aae2d0713d 447 Pfam PF00512 His Kinase A (phospho-acceptor) domain 231 290 3.1E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SII_RS04990 c1f258c370e22c2060bb39aae2d0713d 447 SMART SM00387 338 447 5.8E-4 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SII_RS04990 c1f258c370e22c2060bb39aae2d0713d 447 PRINTS PR01780 Lantibiotic regulatory protein signature 8 23 5.9E-67 T 22-04-2016 IPR008358 Signal transduction histidine kinase/phosphatase, lantibiotic regulatory protein MprB GO:0000155|GO:0000160|GO:0004673|GO:0016020 SII_RS04990 c1f258c370e22c2060bb39aae2d0713d 447 PRINTS PR01780 Lantibiotic regulatory protein signature 220 232 5.9E-67 T 22-04-2016 IPR008358 Signal transduction histidine kinase/phosphatase, lantibiotic regulatory protein MprB GO:0000155|GO:0000160|GO:0004673|GO:0016020 SII_RS04990 c1f258c370e22c2060bb39aae2d0713d 447 PRINTS PR01780 Lantibiotic regulatory protein signature 67 82 5.9E-67 T 22-04-2016 IPR008358 Signal transduction histidine kinase/phosphatase, lantibiotic regulatory protein MprB GO:0000155|GO:0000160|GO:0004673|GO:0016020 SII_RS04990 c1f258c370e22c2060bb39aae2d0713d 447 PRINTS PR01780 Lantibiotic regulatory protein signature 200 214 5.9E-67 T 22-04-2016 IPR008358 Signal transduction histidine kinase/phosphatase, lantibiotic regulatory protein MprB GO:0000155|GO:0000160|GO:0004673|GO:0016020 SII_RS04990 c1f258c370e22c2060bb39aae2d0713d 447 PRINTS PR01780 Lantibiotic regulatory protein signature 237 253 5.9E-67 T 22-04-2016 IPR008358 Signal transduction histidine kinase/phosphatase, lantibiotic regulatory protein MprB GO:0000155|GO:0000160|GO:0004673|GO:0016020 SII_RS04990 c1f258c370e22c2060bb39aae2d0713d 447 PRINTS PR01780 Lantibiotic regulatory protein signature 378 394 5.9E-67 T 22-04-2016 IPR008358 Signal transduction histidine kinase/phosphatase, lantibiotic regulatory protein MprB GO:0000155|GO:0000160|GO:0004673|GO:0016020 SII_RS04990 c1f258c370e22c2060bb39aae2d0713d 447 PRINTS PR01780 Lantibiotic regulatory protein signature 277 294 5.9E-67 T 22-04-2016 IPR008358 Signal transduction histidine kinase/phosphatase, lantibiotic regulatory protein MprB GO:0000155|GO:0000160|GO:0004673|GO:0016020 SII_RS04990 c1f258c370e22c2060bb39aae2d0713d 447 PRINTS PR01780 Lantibiotic regulatory protein signature 105 121 5.9E-67 T 22-04-2016 IPR008358 Signal transduction histidine kinase/phosphatase, lantibiotic regulatory protein MprB GO:0000155|GO:0000160|GO:0004673|GO:0016020 SII_RS04990 c1f258c370e22c2060bb39aae2d0713d 447 PRINTS PR01780 Lantibiotic regulatory protein signature 334 349 5.9E-67 T 22-04-2016 IPR008358 Signal transduction histidine kinase/phosphatase, lantibiotic regulatory protein MprB GO:0000155|GO:0000160|GO:0004673|GO:0016020 SII_RS04990 c1f258c370e22c2060bb39aae2d0713d 447 PRINTS PR01780 Lantibiotic regulatory protein signature 399 414 5.9E-67 T 22-04-2016 IPR008358 Signal transduction histidine kinase/phosphatase, lantibiotic regulatory protein MprB GO:0000155|GO:0000160|GO:0004673|GO:0016020 SII_RS04990 c1f258c370e22c2060bb39aae2d0713d 447 PRINTS PR01780 Lantibiotic regulatory protein signature 131 149 5.9E-67 T 22-04-2016 IPR008358 Signal transduction histidine kinase/phosphatase, lantibiotic regulatory protein MprB GO:0000155|GO:0000160|GO:0004673|GO:0016020 SII_RS04990 c1f258c370e22c2060bb39aae2d0713d 447 PANTHER PTHR24423 214 445 2.6E-16 T 22-04-2016 SII_RS04990 c1f258c370e22c2060bb39aae2d0713d 447 PANTHER PTHR24423 35 45 2.6E-16 T 22-04-2016 SII_RS04990 c1f258c370e22c2060bb39aae2d0713d 447 Gene3D G3DSA:1.10.287.130 233 288 1.9E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SII_RS00805 8bb7c6b459038b5fe1e79b9f0e49efbd 190 Pfam PF01751 Toprim domain 8 72 1.1E-5 T 22-04-2016 IPR006171 Toprim domain SII_RS00805 8bb7c6b459038b5fe1e79b9f0e49efbd 190 Pfam PF13331 Domain of unknown function (DUF4093) 97 182 1.2E-27 T 22-04-2016 IPR025156 Ribonuclease M5, C-terminal domain SII_RS00805 8bb7c6b459038b5fe1e79b9f0e49efbd 190 TIGRFAM TIGR00334 5S_RNA_mat_M5: ribonuclease M5 4 180 8.5E-46 T 22-04-2016 IPR004466 Ribonuclease M5 GO:0043822 SII_RS00805 8bb7c6b459038b5fe1e79b9f0e49efbd 190 Gene3D G3DSA:3.40.1360.20 3 124 2.3E-36 T 22-04-2016 SII_RS00805 8bb7c6b459038b5fe1e79b9f0e49efbd 190 PANTHER PTHR39156 2 190 3.8E-77 T 22-04-2016 SII_RS00805 8bb7c6b459038b5fe1e79b9f0e49efbd 190 Hamap MF_01469 Ribonuclease M5 [rnmV]. 5 185 28.823 T 22-04-2016 IPR004466 Ribonuclease M5 GO:0043822 SII_RS00805 8bb7c6b459038b5fe1e79b9f0e49efbd 190 SUPERFAMILY SSF110455 3 122 3.4E-31 T 22-04-2016 SII_RS00805 8bb7c6b459038b5fe1e79b9f0e49efbd 190 SMART SM00493 6 79 0.0026 T 22-04-2016 IPR006171 Toprim domain SII_RS02735 d2bd1ad8dcf31abac52b13a949f648fb 267 SUPERFAMILY SSF52540 16 254 1.11E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS02735 d2bd1ad8dcf31abac52b13a949f648fb 267 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 21 267 1.7E-118 T 22-04-2016 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 SII_RS02735 d2bd1ad8dcf31abac52b13a949f648fb 267 Gene3D G3DSA:3.40.50.300 16 258 6.5E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS02735 d2bd1ad8dcf31abac52b13a949f648fb 267 PANTHER PTHR24220:SF506 22 265 1.4E-134 T 22-04-2016 SII_RS02735 d2bd1ad8dcf31abac52b13a949f648fb 267 PANTHER PTHR24220 22 265 1.4E-134 T 22-04-2016 SII_RS02735 d2bd1ad8dcf31abac52b13a949f648fb 267 ProSitePatterns PS00211 ABC transporters family signature. 164 178 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SII_RS02735 d2bd1ad8dcf31abac52b13a949f648fb 267 Pfam PF00005 ABC transporter 37 191 1.1E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SII_RS02735 d2bd1ad8dcf31abac52b13a949f648fb 267 SMART SM00382 45 239 1.4E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain SII_RS06465 e72ba25b73db116116de3af3aeb49c61 461 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 7 366 2.5E-97 T 22-04-2016 IPR020823 Cell division protein FtsA GO:0007049 SII_RS06465 e72ba25b73db116116de3af3aeb49c61 461 SUPERFAMILY SSF53067 6 195 1.53E-56 T 22-04-2016 SII_RS06465 e72ba25b73db116116de3af3aeb49c61 461 PANTHER PTHR32432 1 447 4.0E-151 T 22-04-2016 SII_RS06465 e72ba25b73db116116de3af3aeb49c61 461 Gene3D G3DSA:3.30.420.40 195 232 1.5E-18 T 22-04-2016 SII_RS06465 e72ba25b73db116116de3af3aeb49c61 461 Gene3D G3DSA:3.30.420.40 295 346 1.5E-18 T 22-04-2016 SII_RS06465 e72ba25b73db116116de3af3aeb49c61 461 PIRSF PIRSF003101 1 460 1.0E-126 T 22-04-2016 IPR020823 Cell division protein FtsA GO:0007049 SII_RS06465 e72ba25b73db116116de3af3aeb49c61 461 Gene3D G3DSA:3.30.420.40 1 138 4.3E-51 T 22-04-2016 SII_RS06465 e72ba25b73db116116de3af3aeb49c61 461 PANTHER PTHR32432:SF4 1 447 4.0E-151 T 22-04-2016 SII_RS06465 e72ba25b73db116116de3af3aeb49c61 461 Pfam PF11983 Membrane-attachment and polymerisation-promoting switch 376 461 4.2E-20 T 22-04-2016 IPR021873 Cell division protein FtsA, C-terminal SII_RS06465 e72ba25b73db116116de3af3aeb49c61 461 Pfam PF02491 SHS2 domain inserted in FTSA 85 159 2.7E-21 T 22-04-2016 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 SII_RS06465 e72ba25b73db116116de3af3aeb49c61 461 Pfam PF14450 Cell division protein FtsA 206 364 7.6E-17 T 22-04-2016 SII_RS06465 e72ba25b73db116116de3af3aeb49c61 461 Pfam PF14450 Cell division protein FtsA 9 180 1.0E-7 T 22-04-2016 SII_RS06465 e72ba25b73db116116de3af3aeb49c61 461 SMART SM00842 7 194 5.9E-84 T 22-04-2016 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 SII_RS06465 e72ba25b73db116116de3af3aeb49c61 461 SUPERFAMILY SSF53067 197 364 4.97E-37 T 22-04-2016 SII_RS06465 e72ba25b73db116116de3af3aeb49c61 461 Hamap MF_02033 Cell division protein FtsA [ftsA]. 3 460 27.844 T 22-04-2016 IPR020823 Cell division protein FtsA GO:0007049 SII_RS06465 e72ba25b73db116116de3af3aeb49c61 461 Gene3D G3DSA:3.90.640.10 233 294 2.5E-21 T 22-04-2016 SII_RS00370 7e427487aa186526be4d58a30ba52272 333 Pfam PF01791 DeoC/LacD family aldolase 26 287 4.7E-60 T 22-04-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 SII_RS00370 7e427487aa186526be4d58a30ba52272 333 SMART SM01133 24 288 2.6E-28 T 22-04-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 SII_RS00370 7e427487aa186526be4d58a30ba52272 333 PANTHER PTHR39340 2 330 4.0E-122 T 22-04-2016 SII_RS00370 7e427487aa186526be4d58a30ba52272 333 Hamap MF_00734 Tagatose 1,6-diphosphate aldolase [lacD]. 1 333 187.877 T 22-04-2016 IPR005927 Tagatose 1,6-diphosphate aldolase GO:0009024|GO:0019512 KEGG: 00052+4.1.2.40|MetaCyc: PWY-7077|MetaCyc: PWY-7395|UniPathway: UPA00704 SII_RS00370 7e427487aa186526be4d58a30ba52272 333 TIGRFAM TIGR01232 lacD: tagatose 1,6-diphosphate aldolase 7 330 1.0E-143 T 22-04-2016 IPR005927 Tagatose 1,6-diphosphate aldolase GO:0009024|GO:0019512 KEGG: 00052+4.1.2.40|MetaCyc: PWY-7077|MetaCyc: PWY-7395|UniPathway: UPA00704 SII_RS00370 7e427487aa186526be4d58a30ba52272 333 PANTHER PTHR39340:SF1 2 330 4.0E-122 T 22-04-2016 SII_RS00370 7e427487aa186526be4d58a30ba52272 333 SUPERFAMILY SSF51569 10 327 4.76E-67 T 22-04-2016 SII_RS00370 7e427487aa186526be4d58a30ba52272 333 Gene3D G3DSA:3.20.20.70 8 332 6.5E-131 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SII_RS05585 a4b15788334da2d5236cabda54170b2d 362 PIRSF PIRSF000112 1 360 1.7E-100 T 22-04-2016 SII_RS05585 a4b15788334da2d5236cabda54170b2d 362 PANTHER PTHR11496 1 361 3.5E-172 T 22-04-2016 SII_RS05585 a4b15788334da2d5236cabda54170b2d 362 Pfam PF00465 Iron-containing alcohol dehydrogenase 7 348 1.3E-63 T 22-04-2016 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 SII_RS05585 a4b15788334da2d5236cabda54170b2d 362 SUPERFAMILY SSF56796 2 357 4.06E-91 T 22-04-2016 SII_RS05585 a4b15788334da2d5236cabda54170b2d 362 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 240 260 - T 22-04-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 SII_RS05585 a4b15788334da2d5236cabda54170b2d 362 Gene3D G3DSA:3.40.50.1970 2 157 2.2E-42 T 22-04-2016 SII_RS05585 a4b15788334da2d5236cabda54170b2d 362 PANTHER PTHR11496:SF57 1 361 3.5E-172 T 22-04-2016 SII_RS05585 a4b15788334da2d5236cabda54170b2d 362 Gene3D G3DSA:1.20.1090.10 159 360 1.4E-67 T 22-04-2016 SII_RS02705 820a3e9da3abbb8ec3414439c6ccec32 94 SUPERFAMILY SSF158504 7 89 6.93E-32 T 22-04-2016 IPR023324 BH2638-like domain SII_RS02705 820a3e9da3abbb8ec3414439c6ccec32 94 Pfam PF05256 Uncharacterised protein family (UPF0223) 4 88 5.0E-35 T 22-04-2016 IPR007920 Protein of unknown function UPF0223 SII_RS02705 820a3e9da3abbb8ec3414439c6ccec32 94 PANTHER PTHR41305 4 93 5.4E-38 T 22-04-2016 SII_RS02705 820a3e9da3abbb8ec3414439c6ccec32 94 ProDom PD062738 UPF0223 FAMILY UNCHARACTERISED CYTOSOLIC SUPERFAMILY YKTA LMO1058/LIN1050 INOSITOL MW0980 M6_SPY0948 5 90 2.0E-30 T 22-04-2016 IPR007920 Protein of unknown function UPF0223 SII_RS02705 820a3e9da3abbb8ec3414439c6ccec32 94 Hamap MF_01041 UPF0223 protein . 3 90 25.783 T 22-04-2016 IPR007920 Protein of unknown function UPF0223 SII_RS02705 820a3e9da3abbb8ec3414439c6ccec32 94 Gene3D G3DSA:1.10.220.80 14 92 3.4E-33 T 22-04-2016 IPR023324 BH2638-like domain SII_RS02705 820a3e9da3abbb8ec3414439c6ccec32 94 PIRSF PIRSF037260 1 92 2.1E-39 T 22-04-2016 IPR007920 Protein of unknown function UPF0223 SII_RS02200 6ec816572d2923ae23cfd5f5cc022033 567 PANTHER PTHR33989 1 439 1.2E-224 T 22-04-2016 SII_RS02200 6ec816572d2923ae23cfd5f5cc022033 567 SUPERFAMILY SSF52794 462 565 1.2E-17 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 SII_RS02200 6ec816572d2923ae23cfd5f5cc022033 567 TIGRFAM TIGR00394 lac_pts_IIC: PTS system, lactose-specific IIC component 12 420 4.6E-207 T 22-04-2016 IPR004801 Phosphotransferase system, lactose-specific IIC component GO:0008982|GO:0016021|GO:0022869 SII_RS02200 6ec816572d2923ae23cfd5f5cc022033 567 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 13 420 1.2E-71 T 22-04-2016 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 SII_RS02200 6ec816572d2923ae23cfd5f5cc022033 567 PANTHER PTHR33989:SF6 1 439 1.2E-224 T 22-04-2016 SII_RS02200 6ec816572d2923ae23cfd5f5cc022033 567 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 463 530 3.4E-10 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 SII_RS02200 6ec816572d2923ae23cfd5f5cc022033 567 TIGRFAM TIGR00853 pts-lac: PTS system, lactose/cellobiose family IIB component 423 557 5.8E-53 T 22-04-2016 IPR013012 Phosphotransferase system, EIIB component, type 3 GO:0008982|GO:0009401 SII_RS02200 6ec816572d2923ae23cfd5f5cc022033 567 Gene3D G3DSA:3.40.50.270 460 565 1.6E-21 T 22-04-2016 SII_RS02200 6ec816572d2923ae23cfd5f5cc022033 567 Pfam PF02378 Phosphotransferase system, EIIC 28 347 4.5E-64 T 22-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 SII_RS07250 fa27b8dc88c9887a3a255866f2ed3aa6 74 Gene3D G3DSA:1.10.1200.10 3 72 5.1E-22 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain SII_RS07250 fa27b8dc88c9887a3a255866f2ed3aa6 74 SUPERFAMILY SSF47336 3 72 3.01E-17 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain SII_RS07250 fa27b8dc88c9887a3a255866f2ed3aa6 74 Hamap MF_01217 Acyl carrier protein [acpP]. 2 73 18.16 T 22-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 SII_RS07250 fa27b8dc88c9887a3a255866f2ed3aa6 74 Pfam PF00550 Phosphopantetheine attachment site 5 69 4.4E-14 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain SII_RS07250 fa27b8dc88c9887a3a255866f2ed3aa6 74 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 39 72 8.0E-12 T 22-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 SII_RS07200 45c471a7c94d560783531508391b6b77 219 PANTHER PTHR30353 1 216 1.2E-62 T 22-04-2016 IPR032818 DedA family SII_RS07200 45c471a7c94d560783531508391b6b77 219 Pfam PF09335 SNARE associated Golgi protein 45 174 1.3E-24 T 22-04-2016 IPR032816 SNARE associated Golgi protein SII_RS07200 45c471a7c94d560783531508391b6b77 219 PANTHER PTHR30353:SF0 1 216 1.2E-62 T 22-04-2016 SII_RS02780 cd1ab3a95f8bbabd899d75332ada7247 323 PANTHER PTHR10210:SF41 1 323 4.2E-163 T 22-04-2016 SII_RS02780 cd1ab3a95f8bbabd899d75332ada7247 323 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 135 150 - T 22-04-2016 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: REACT_474|UniPathway: UPA00087 SII_RS02780 cd1ab3a95f8bbabd899d75332ada7247 323 Hamap MF_00583_B Ribose-phosphate pyrophosphokinase [prs]. 11 318 44.141 T 22-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 SII_RS02780 cd1ab3a95f8bbabd899d75332ada7247 323 PANTHER PTHR10210 1 323 4.2E-163 T 22-04-2016 SII_RS02780 cd1ab3a95f8bbabd899d75332ada7247 323 Pfam PF14572 Phosphoribosyl synthetase-associated domain 213 317 1.7E-22 T 22-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 SII_RS02780 cd1ab3a95f8bbabd899d75332ada7247 323 SMART SM01400 11 127 2.2E-76 T 22-04-2016 SII_RS02780 cd1ab3a95f8bbabd899d75332ada7247 323 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 11 317 2.7E-106 T 22-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 SII_RS02780 cd1ab3a95f8bbabd899d75332ada7247 323 Gene3D G3DSA:3.40.50.2020 8 167 2.3E-74 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like SII_RS02780 cd1ab3a95f8bbabd899d75332ada7247 323 SUPERFAMILY SSF53271 10 162 8.33E-54 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like SII_RS02780 cd1ab3a95f8bbabd899d75332ada7247 323 SUPERFAMILY SSF53271 113 309 1.12E-44 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like SII_RS02780 cd1ab3a95f8bbabd899d75332ada7247 323 Gene3D G3DSA:3.40.50.2020 168 288 8.1E-40 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like SII_RS02780 cd1ab3a95f8bbabd899d75332ada7247 323 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 11 127 4.8E-49 T 22-04-2016 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 SII_RS06895 16d20387ae5b2ef6789b7df7be09428d 295 SMART SM00244 19 179 4.9E-29 T 22-04-2016 IPR001107 Band 7 domain SII_RS06895 16d20387ae5b2ef6789b7df7be09428d 295 Pfam PF01145 SPFH domain / Band 7 family 23 195 2.9E-28 T 22-04-2016 IPR001107 Band 7 domain SII_RS06895 16d20387ae5b2ef6789b7df7be09428d 295 PANTHER PTHR10264:SF84 1 292 1.3E-139 T 22-04-2016 SII_RS06895 16d20387ae5b2ef6789b7df7be09428d 295 SUPERFAMILY SSF117892 59 185 1.31E-24 T 22-04-2016 IPR001107 Band 7 domain SII_RS06895 16d20387ae5b2ef6789b7df7be09428d 295 PANTHER PTHR10264 1 292 1.3E-139 T 22-04-2016 IPR001972 Stomatin family GO:0016020 SII_RS07570 4ad107521f037c3d59f5bc424deaffee 321 Gene3D G3DSA:1.10.260.40 4 54 2.5E-24 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SII_RS07570 4ad107521f037c3d59f5bc424deaffee 321 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 14 24 5.0E-5 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SII_RS07570 4ad107521f037c3d59f5bc424deaffee 321 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 4 14 5.0E-5 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SII_RS07570 4ad107521f037c3d59f5bc424deaffee 321 SMART SM00354 2 72 1.9E-36 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SII_RS07570 4ad107521f037c3d59f5bc424deaffee 321 Gene3D G3DSA:3.40.50.2300 55 171 7.4E-41 T 22-04-2016 SII_RS07570 4ad107521f037c3d59f5bc424deaffee 321 Gene3D G3DSA:3.40.50.2300 172 301 1.5E-29 T 22-04-2016 SII_RS07570 4ad107521f037c3d59f5bc424deaffee 321 SUPERFAMILY SSF53822 61 315 6.56E-64 T 22-04-2016 IPR028082 Periplasmic binding protein-like I SII_RS07570 4ad107521f037c3d59f5bc424deaffee 321 ProSitePatterns PS00356 LacI-type HTH domain signature. 5 23 - T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SII_RS07570 4ad107521f037c3d59f5bc424deaffee 321 Pfam PF13377 Periplasmic binding protein-like domain 166 320 1.1E-22 T 22-04-2016 SII_RS07570 4ad107521f037c3d59f5bc424deaffee 321 SUPERFAMILY SSF47413 3 57 6.65E-17 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SII_RS07570 4ad107521f037c3d59f5bc424deaffee 321 PANTHER PTHR30146 2 320 1.3E-102 T 22-04-2016 SII_RS07570 4ad107521f037c3d59f5bc424deaffee 321 PANTHER PTHR30146:SF31 2 320 1.3E-102 T 22-04-2016 SII_RS07570 4ad107521f037c3d59f5bc424deaffee 321 Pfam PF00356 Bacterial regulatory proteins, lacI family 5 49 2.5E-19 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SII_RS02695 30b5c0644bcc2662d7d51f6a8c77445f 310 PANTHER PTHR22749 1 302 4.0E-105 T 22-04-2016 IPR023468 Riboflavin kinase KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|UniPathway: UPA00276 SII_RS02695 30b5c0644bcc2662d7d51f6a8c77445f 310 Pfam PF06574 FAD synthetase 13 165 4.4E-43 T 22-04-2016 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 SII_RS02695 30b5c0644bcc2662d7d51f6a8c77445f 310 Gene3D G3DSA:3.40.50.620 8 177 3.2E-49 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SII_RS02695 30b5c0644bcc2662d7d51f6a8c77445f 310 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 19 303 1.0E-75 T 22-04-2016 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 SII_RS02695 30b5c0644bcc2662d7d51f6a8c77445f 310 SUPERFAMILY SSF82114 172 305 3.27E-41 T 22-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 SII_RS02695 30b5c0644bcc2662d7d51f6a8c77445f 310 PIRSF PIRSF004491 1 310 6.1E-91 T 22-04-2016 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 SII_RS02695 30b5c0644bcc2662d7d51f6a8c77445f 310 SMART SM00904 181 305 5.9E-51 T 22-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 SII_RS02695 30b5c0644bcc2662d7d51f6a8c77445f 310 PANTHER PTHR22749:SF3 1 302 4.0E-105 T 22-04-2016 SII_RS02695 30b5c0644bcc2662d7d51f6a8c77445f 310 Gene3D G3DSA:2.40.30.30 178 304 7.2E-37 T 22-04-2016 IPR023465 Riboflavin kinase domain GO:0008531|GO:0009231 SII_RS02695 30b5c0644bcc2662d7d51f6a8c77445f 310 SUPERFAMILY SSF52374 18 173 1.63E-27 T 22-04-2016 SII_RS02695 30b5c0644bcc2662d7d51f6a8c77445f 310 Pfam PF01687 Riboflavin kinase 182 301 2.1E-30 T 22-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 SII_RS02660 e2db97150d3d9d2c032ff06ecdf29c79 588 Pfam PF00664 ABC transporter transmembrane region 24 292 3.3E-17 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SII_RS02660 e2db97150d3d9d2c032ff06ecdf29c79 588 PANTHER PTHR24222 1 582 7.1E-170 T 22-04-2016 SII_RS02660 e2db97150d3d9d2c032ff06ecdf29c79 588 SUPERFAMILY SSF52540 331 572 5.97E-86 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS02660 e2db97150d3d9d2c032ff06ecdf29c79 588 Gene3D G3DSA:3.40.50.300 337 564 1.6E-74 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS02660 e2db97150d3d9d2c032ff06ecdf29c79 588 ProSitePatterns PS00211 ABC transporters family signature. 474 488 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SII_RS02660 e2db97150d3d9d2c032ff06ecdf29c79 588 SUPERFAMILY SSF90123 9 325 3.01E-56 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SII_RS02660 e2db97150d3d9d2c032ff06ecdf29c79 588 Gene3D G3DSA:1.20.1560.10 9 325 2.1E-46 T 22-04-2016 SII_RS02660 e2db97150d3d9d2c032ff06ecdf29c79 588 SMART SM00382 362 548 3.1E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain SII_RS02660 e2db97150d3d9d2c032ff06ecdf29c79 588 PANTHER PTHR24222:SF24 1 582 7.1E-170 T 22-04-2016 SII_RS02660 e2db97150d3d9d2c032ff06ecdf29c79 588 Pfam PF00005 ABC transporter 353 502 1.1E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SII_RS06085 179007da9681e75d33eed054f5f10ebd 459 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 2 451 40.941 T 22-04-2016 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00113|UniPathway: UPA00113|UniPathway: UPA00973 SII_RS06085 179007da9681e75d33eed054f5f10ebd 459 Pfam PF12804 MobA-like NTP transferase domain 5 145 2.2E-20 T 22-04-2016 IPR025877 MobA-like NTP transferase SII_RS06085 179007da9681e75d33eed054f5f10ebd 459 Gene3D G3DSA:3.90.550.10 1 244 9.3E-81 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SII_RS06085 179007da9681e75d33eed054f5f10ebd 459 PANTHER PTHR22572 4 448 7.3E-213 T 22-04-2016 SII_RS06085 179007da9681e75d33eed054f5f10ebd 459 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 5 451 7.5E-172 T 22-04-2016 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00113|UniPathway: UPA00113|UniPathway: UPA00973 SII_RS06085 179007da9681e75d33eed054f5f10ebd 459 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 394 428 1.2E-10 T 22-04-2016 IPR001451 Hexapeptide repeat SII_RS06085 179007da9681e75d33eed054f5f10ebd 459 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 402 430 - T 22-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 SII_RS06085 179007da9681e75d33eed054f5f10ebd 459 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 318 351 1.5E-4 T 22-04-2016 IPR001451 Hexapeptide repeat SII_RS06085 179007da9681e75d33eed054f5f10ebd 459 SUPERFAMILY SSF53448 4 252 1.36E-64 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SII_RS06085 179007da9681e75d33eed054f5f10ebd 459 SUPERFAMILY SSF51161 256 445 1.05E-46 T 22-04-2016 IPR011004 Trimeric LpxA-like SII_RS06085 179007da9681e75d33eed054f5f10ebd 459 Gene3D G3DSA:2.160.10.10 245 332 9.2E-17 T 22-04-2016 SII_RS06085 179007da9681e75d33eed054f5f10ebd 459 Gene3D G3DSA:2.160.10.10 333 449 3.8E-36 T 22-04-2016 SII_RS06085 179007da9681e75d33eed054f5f10ebd 459 PANTHER PTHR22572:SF115 4 448 7.3E-213 T 22-04-2016 SII_RS07860 960aaf6583cb40fc173e0d231bb7c52e 192 PANTHER PTHR33217:SF1 2 161 1.7E-39 T 22-04-2016 SII_RS07860 960aaf6583cb40fc173e0d231bb7c52e 192 PANTHER PTHR33217 2 161 1.7E-39 T 22-04-2016 SII_RS07860 960aaf6583cb40fc173e0d231bb7c52e 192 ProSitePatterns PS01007 Transposases, Mutator family, signature. 29 53 - T 22-04-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 SII_RS07860 960aaf6583cb40fc173e0d231bb7c52e 192 Pfam PF00872 Transposase, Mutator family 2 172 9.1E-64 T 22-04-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 SII_RS04650 74ffc9171484dcd787a5ff34d18c5410 87 Pfam PF01817 Chorismate mutase type II 7 84 2.1E-19 T 22-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 SII_RS04650 74ffc9171484dcd787a5ff34d18c5410 87 PANTHER PTHR38041 1 87 8.8E-17 T 22-04-2016 SII_RS04650 74ffc9171484dcd787a5ff34d18c5410 87 TIGRFAM TIGR01805 CM_mono_grmpos: chorismate mutase 3 83 1.2E-29 T 22-04-2016 IPR011279 Chorismate mutase, Gram-positive SII_RS04650 74ffc9171484dcd787a5ff34d18c5410 87 Gene3D G3DSA:1.20.59.10 1 85 1.6E-22 T 22-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 SII_RS04650 74ffc9171484dcd787a5ff34d18c5410 87 SMART SM00830 7 86 4.9E-23 T 22-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 SII_RS04650 74ffc9171484dcd787a5ff34d18c5410 87 SUPERFAMILY SSF48600 2 86 3.51E-20 T 22-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 SII_RS06080 afcf256473d0995047d87e97f3ceb91c 183 PANTHER PTHR11839 1 181 1.1E-57 T 22-04-2016 SII_RS06080 afcf256473d0995047d87e97f3ceb91c 183 Pfam PF00293 NUDIX domain 44 159 1.2E-15 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 SII_RS06080 afcf256473d0995047d87e97f3ceb91c 183 PRINTS PR00502 NUDIX hydrolase family signature 72 86 1.8E-5 T 22-04-2016 IPR020476 NUDIX hydrolase SII_RS06080 afcf256473d0995047d87e97f3ceb91c 183 PRINTS PR00502 NUDIX hydrolase family signature 88 103 1.8E-5 T 22-04-2016 IPR020476 NUDIX hydrolase SII_RS06080 afcf256473d0995047d87e97f3ceb91c 183 PANTHER PTHR11839:SF9 1 181 1.1E-57 T 22-04-2016 SII_RS06080 afcf256473d0995047d87e97f3ceb91c 183 SUPERFAMILY SSF55811 6 179 1.26E-44 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SII_RS06080 afcf256473d0995047d87e97f3ceb91c 183 Gene3D G3DSA:3.90.79.10 4 179 1.1E-53 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SII_RS08120 27fd2dd7fa9e9bbf921c9331555613fa 738 Pfam PF13291 ACT domain 657 735 7.3E-20 T 22-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 SII_RS08120 27fd2dd7fa9e9bbf921c9331555613fa 738 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 31 735 1.8E-239 T 22-04-2016 IPR004811 RelA/SpoT family GO:0015969 SII_RS08120 27fd2dd7fa9e9bbf921c9331555613fa 738 Pfam PF04607 Region found in RelA / SpoT proteins 240 348 4.0E-36 T 22-04-2016 IPR007685 RelA/SpoT GO:0015969 SII_RS08120 27fd2dd7fa9e9bbf921c9331555613fa 738 SUPERFAMILY SSF55021 660 735 3.08E-8 T 22-04-2016 SII_RS08120 27fd2dd7fa9e9bbf921c9331555613fa 738 PANTHER PTHR21262:SF0 10 738 0.0 T 22-04-2016 SII_RS08120 27fd2dd7fa9e9bbf921c9331555613fa 738 SUPERFAMILY SSF81301 197 370 1.32E-60 T 22-04-2016 SII_RS08120 27fd2dd7fa9e9bbf921c9331555613fa 738 Pfam PF02824 TGS domain 394 453 2.9E-21 T 22-04-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 SII_RS08120 27fd2dd7fa9e9bbf921c9331555613fa 738 Pfam PF13328 HD domain 31 180 4.2E-47 T 22-04-2016 IPR003607 HD/PDEase domain SII_RS08120 27fd2dd7fa9e9bbf921c9331555613fa 738 Gene3D G3DSA:3.30.460.10 198 329 1.7E-47 T 22-04-2016 SII_RS08120 27fd2dd7fa9e9bbf921c9331555613fa 738 Gene3D G3DSA:3.30.70.260 660 734 2.6E-11 T 22-04-2016 SII_RS08120 27fd2dd7fa9e9bbf921c9331555613fa 738 Gene3D G3DSA:3.10.20.30 393 455 6.9E-26 T 22-04-2016 IPR012675 Beta-grasp domain SII_RS08120 27fd2dd7fa9e9bbf921c9331555613fa 738 SMART SM00954 240 349 7.8E-62 T 22-04-2016 IPR007685 RelA/SpoT GO:0015969 SII_RS08120 27fd2dd7fa9e9bbf921c9331555613fa 738 PANTHER PTHR21262 10 738 0.0 T 22-04-2016 SII_RS08120 27fd2dd7fa9e9bbf921c9331555613fa 738 SUPERFAMILY SSF81271 381 454 5.45E-19 T 22-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 SII_RS08120 27fd2dd7fa9e9bbf921c9331555613fa 738 SMART SM00471 46 158 8.6E-10 T 22-04-2016 IPR003607 HD/PDEase domain SII_RS08120 27fd2dd7fa9e9bbf921c9331555613fa 738 SUPERFAMILY SSF109604 10 196 1.41E-74 T 22-04-2016 SII_RS04305 8b31240e956eabac97422a6f2ec1a1ba 434 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 431 8.3E-208 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 SII_RS04305 8b31240e956eabac97422a6f2ec1a1ba 434 Hamap MF_00318 Enolase [eno]. 2 417 44.593 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 SII_RS04305 8b31240e956eabac97422a6f2ec1a1ba 434 Pfam PF03952 Enolase, N-terminal domain 4 134 4.5E-61 T 22-04-2016 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 SII_RS04305 8b31240e956eabac97422a6f2ec1a1ba 434 Gene3D G3DSA:3.20.20.120 128 430 2.6E-135 T 22-04-2016 IPR029065 Enolase C-terminal domain-like SII_RS04305 8b31240e956eabac97422a6f2ec1a1ba 434 SMART SM01192 139 431 5.8E-214 T 22-04-2016 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 SII_RS04305 8b31240e956eabac97422a6f2ec1a1ba 434 PANTHER PTHR11902 1 431 5.2E-263 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 SII_RS04305 8b31240e956eabac97422a6f2ec1a1ba 434 ProSitePatterns PS00164 Enolase signature. 340 353 - T 22-04-2016 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 SII_RS04305 8b31240e956eabac97422a6f2ec1a1ba 434 SUPERFAMILY SSF54826 3 138 3.98E-58 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 SII_RS04305 8b31240e956eabac97422a6f2ec1a1ba 434 PIRSF PIRSF001400 1 431 5.3E-189 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 SII_RS04305 8b31240e956eabac97422a6f2ec1a1ba 434 Pfam PF00113 Enolase, C-terminal TIM barrel domain 140 429 3.2E-129 T 22-04-2016 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 SII_RS04305 8b31240e956eabac97422a6f2ec1a1ba 434 SMART SM01193 4 134 1.4E-95 T 22-04-2016 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 SII_RS04305 8b31240e956eabac97422a6f2ec1a1ba 434 PRINTS PR00148 Enolase signature 107 123 1.3E-45 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 SII_RS04305 8b31240e956eabac97422a6f2ec1a1ba 434 PRINTS PR00148 Enolase signature 161 174 1.3E-45 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 SII_RS04305 8b31240e956eabac97422a6f2ec1a1ba 434 PRINTS PR00148 Enolase signature 317 328 1.3E-45 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 SII_RS04305 8b31240e956eabac97422a6f2ec1a1ba 434 PRINTS PR00148 Enolase signature 369 386 1.3E-45 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 SII_RS04305 8b31240e956eabac97422a6f2ec1a1ba 434 PRINTS PR00148 Enolase signature 37 51 1.3E-45 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 SII_RS04305 8b31240e956eabac97422a6f2ec1a1ba 434 PRINTS PR00148 Enolase signature 340 354 1.3E-45 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 SII_RS04305 8b31240e956eabac97422a6f2ec1a1ba 434 Gene3D G3DSA:3.30.390.10 4 125 5.7E-57 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 SII_RS04305 8b31240e956eabac97422a6f2ec1a1ba 434 SUPERFAMILY SSF51604 139 432 1.36E-127 T 22-04-2016 IPR029065 Enolase C-terminal domain-like SII_RS08820 315319149a5eddbc09082720bc1d21cc 145 SUPERFAMILY SSF51735 11 141 3.94E-37 T 22-04-2016 IPR016040 NAD(P)-binding domain SII_RS08820 315319149a5eddbc09082720bc1d21cc 145 SMART SM00881 17 111 3.1E-18 T 22-04-2016 IPR003781 CoA-binding GO:0048037 SII_RS08820 315319149a5eddbc09082720bc1d21cc 145 PANTHER PTHR33303 1 142 2.5E-43 T 22-04-2016 SII_RS08820 315319149a5eddbc09082720bc1d21cc 145 Pfam PF13380 CoA binding domain 22 138 3.3E-31 T 22-04-2016 IPR003781 CoA-binding GO:0048037 SII_RS08820 315319149a5eddbc09082720bc1d21cc 145 Gene3D G3DSA:3.40.50.720 9 141 5.5E-42 T 22-04-2016 IPR016040 NAD(P)-binding domain SII_RS01720 aa1899e85fe1fba31f022f93e33b9a22 729 PANTHER PTHR30009 12 564 0.0 T 22-04-2016 SII_RS01720 aa1899e85fe1fba31f022f93e33b9a22 729 TIGRFAM TIGR02003 PTS-II-BC-unk1: PTS system, IIBC component 9 554 1.3E-290 T 22-04-2016 IPR011300 Phosphotransferase system, IIBC component KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SII_RS01720 aa1899e85fe1fba31f022f93e33b9a22 729 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 582 705 4.2E-50 T 22-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SII_RS01720 aa1899e85fe1fba31f022f93e33b9a22 729 PANTHER PTHR30009:SF8 12 564 0.0 T 22-04-2016 SII_RS01720 aa1899e85fe1fba31f022f93e33b9a22 729 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 645 657 - T 22-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SII_RS01720 aa1899e85fe1fba31f022f93e33b9a22 729 Gene3D G3DSA:2.70.70.10 580 727 1.3E-58 T 22-04-2016 SII_RS01720 aa1899e85fe1fba31f022f93e33b9a22 729 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 587 703 1.7E-41 T 22-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SII_RS01720 aa1899e85fe1fba31f022f93e33b9a22 729 SUPERFAMILY SSF55604 479 552 2.35E-19 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 SII_RS01720 aa1899e85fe1fba31f022f93e33b9a22 729 Pfam PF02378 Phosphotransferase system, EIIC 19 382 7.7E-53 T 22-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 SII_RS01720 aa1899e85fe1fba31f022f93e33b9a22 729 Pfam PF00367 phosphotransferase system, EIIB 482 512 9.5E-14 T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 SII_RS01720 aa1899e85fe1fba31f022f93e33b9a22 729 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 442 538 4.1E-16 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 SII_RS01720 aa1899e85fe1fba31f022f93e33b9a22 729 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 491 508 - T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 SII_RS01720 aa1899e85fe1fba31f022f93e33b9a22 729 Gene3D G3DSA:3.30.1360.60 477 553 3.7E-25 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 SII_RS01720 aa1899e85fe1fba31f022f93e33b9a22 729 SUPERFAMILY SSF51261 581 723 7.85E-52 T 22-04-2016 IPR011055 Duplicated hybrid motif SII_RS04790 6d49a7b2ab77e23d99b1d7493310fc1e 232 Hamap MF_00104 Ribonuclease 3 [rnc]. 8 224 31.136 T 22-04-2016 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 SII_RS04790 6d49a7b2ab77e23d99b1d7493310fc1e 232 PANTHER PTHR11207 11 226 5.2E-84 T 22-04-2016 SII_RS04790 6d49a7b2ab77e23d99b1d7493310fc1e 232 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 9 226 1.2E-80 T 22-04-2016 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 SII_RS04790 6d49a7b2ab77e23d99b1d7493310fc1e 232 ProSitePatterns PS00517 Ribonuclease III family signature. 44 52 - T 22-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 SII_RS04790 6d49a7b2ab77e23d99b1d7493310fc1e 232 Pfam PF00035 Double-stranded RNA binding motif 161 226 2.5E-18 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain SII_RS04790 6d49a7b2ab77e23d99b1d7493310fc1e 232 Gene3D G3DSA:3.30.160.20 160 226 2.1E-27 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain SII_RS04790 6d49a7b2ab77e23d99b1d7493310fc1e 232 SMART SM00358 161 228 1.4E-20 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain SII_RS04790 6d49a7b2ab77e23d99b1d7493310fc1e 232 Gene3D G3DSA:1.10.1520.10 6 155 3.6E-47 T 22-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 SII_RS04790 6d49a7b2ab77e23d99b1d7493310fc1e 232 Pfam PF14622 Ribonuclease-III-like 18 146 2.7E-35 T 22-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 SII_RS04790 6d49a7b2ab77e23d99b1d7493310fc1e 232 SUPERFAMILY SSF54768 149 226 1.32E-22 T 22-04-2016 SII_RS04790 6d49a7b2ab77e23d99b1d7493310fc1e 232 SUPERFAMILY SSF69065 4 163 3.66E-50 T 22-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 SII_RS04790 6d49a7b2ab77e23d99b1d7493310fc1e 232 SMART SM00535 20 155 3.9E-58 T 22-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 SII_RS03470 5f55ed6f008ceaaba31ee5d12b0bc52c 244 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 22 215 6.1E-65 T 22-04-2016 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 SII_RS03470 5f55ed6f008ceaaba31ee5d12b0bc52c 244 Gene3D G3DSA:3.40.1280.10 1 154 3.1E-62 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal SII_RS03470 5f55ed6f008ceaaba31ee5d12b0bc52c 244 PANTHER PTHR32125:SF1 1 222 1.3E-111 T 22-04-2016 SII_RS03470 5f55ed6f008ceaaba31ee5d12b0bc52c 244 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 1 227 1.8E-90 T 22-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 SII_RS03470 5f55ed6f008ceaaba31ee5d12b0bc52c 244 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 244 107.863 T 22-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 SII_RS03470 5f55ed6f008ceaaba31ee5d12b0bc52c 244 SUPERFAMILY SSF75217 1 240 1.23E-93 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases SII_RS03470 5f55ed6f008ceaaba31ee5d12b0bc52c 244 PIRSF PIRSF000386 1 243 2.3E-97 T 22-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 SII_RS03470 5f55ed6f008ceaaba31ee5d12b0bc52c 244 Gene3D G3DSA:1.10.1270.20 155 239 4.6E-35 T 22-04-2016 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 SII_RS03470 5f55ed6f008ceaaba31ee5d12b0bc52c 244 PANTHER PTHR32125 1 222 1.3E-111 T 22-04-2016 SII_RS08745 6401c64aa6a90c9fe4ce4c56651f67b4 86 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 5 77 7.0E-36 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SII_RS08745 6401c64aa6a90c9fe4ce4c56651f67b4 86 Gene3D G3DSA:2.40.50.140 6 83 1.3E-34 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SII_RS08745 6401c64aa6a90c9fe4ce4c56651f67b4 86 PRINTS PR00973 Ribosomal protein S17 family signature 67 74 1.6E-11 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SII_RS08745 6401c64aa6a90c9fe4ce4c56651f67b4 86 PRINTS PR00973 Ribosomal protein S17 family signature 57 67 1.6E-11 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SII_RS08745 6401c64aa6a90c9fe4ce4c56651f67b4 86 PRINTS PR00973 Ribosomal protein S17 family signature 25 48 1.6E-11 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SII_RS08745 6401c64aa6a90c9fe4ce4c56651f67b4 86 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 6 77 5.1E-35 T 22-04-2016 IPR019984 Ribosomal protein S17, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 SII_RS08745 6401c64aa6a90c9fe4ce4c56651f67b4 86 SUPERFAMILY SSF50249 6 83 4.71E-32 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SII_RS08745 6401c64aa6a90c9fe4ce4c56651f67b4 86 PANTHER PTHR10744 3 85 4.5E-40 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SII_RS08745 6401c64aa6a90c9fe4ce4c56651f67b4 86 ProSitePatterns PS00056 Ribosomal protein S17 signature. 57 69 - T 22-04-2016 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SII_RS08745 6401c64aa6a90c9fe4ce4c56651f67b4 86 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 4 82 24.415 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SII_RS08745 6401c64aa6a90c9fe4ce4c56651f67b4 86 Pfam PF00366 Ribosomal protein S17 11 78 1.5E-32 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SII_RS07765 ee73ded709dd5d070a6426146ab0f444 333 SUPERFAMILY SSF53613 1 323 2.62E-54 T 22-04-2016 IPR029056 Ribokinase-like SII_RS07765 ee73ded709dd5d070a6426146ab0f444 333 PANTHER PTHR10584 1 333 4.1E-43 T 22-04-2016 SII_RS07765 ee73ded709dd5d070a6426146ab0f444 333 Gene3D G3DSA:3.40.1190.20 1 327 4.3E-58 T 22-04-2016 IPR029056 Ribokinase-like SII_RS07765 ee73ded709dd5d070a6426146ab0f444 333 PANTHER PTHR10584:SF203 1 333 4.1E-43 T 22-04-2016 SII_RS07765 ee73ded709dd5d070a6426146ab0f444 333 Pfam PF00294 pfkB family carbohydrate kinase 1 313 1.9E-26 T 22-04-2016 IPR011611 Carbohydrate kinase PfkB SII_RS03935 c2b02ad3a145fcdf52ad2bd7f3ed62a0 444 Pfam PF01134 Glucose inhibited division protein A 6 377 2.5E-112 T 22-04-2016 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 SII_RS03935 c2b02ad3a145fcdf52ad2bd7f3ed62a0 444 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 346 369 - T 22-04-2016 IPR020595 MnmG-related, conserved site SII_RS03935 c2b02ad3a145fcdf52ad2bd7f3ed62a0 444 Gene3D G3DSA:3.50.50.60 287 327 7.2E-8 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SII_RS03935 c2b02ad3a145fcdf52ad2bd7f3ed62a0 444 PANTHER PTHR11806 6 442 4.3E-245 T 22-04-2016 SII_RS03935 c2b02ad3a145fcdf52ad2bd7f3ed62a0 444 SUPERFAMILY SSF51905 8 375 3.53E-28 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SII_RS03935 c2b02ad3a145fcdf52ad2bd7f3ed62a0 444 Gene3D G3DSA:3.50.50.60 328 385 2.9E-11 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SII_RS03935 c2b02ad3a145fcdf52ad2bd7f3ed62a0 444 Gene3D G3DSA:3.50.50.60 8 229 2.9E-11 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SII_RS03935 c2b02ad3a145fcdf52ad2bd7f3ed62a0 444 TIGRFAM TIGR00137 gid_trmFO: tRNA:m(5)U-54 methyltransferase 6 441 5.0E-208 T 22-04-2016 IPR004417 Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO GO:0005737|GO:0008033|GO:0047151|GO:0050660 SII_RS03935 c2b02ad3a145fcdf52ad2bd7f3ed62a0 444 Hamap MF_01037 Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO [trmFO]. 6 444 36.13 T 22-04-2016 IPR004417 Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO GO:0005737|GO:0008033|GO:0047151|GO:0050660 SII_RS03935 c2b02ad3a145fcdf52ad2bd7f3ed62a0 444 PANTHER PTHR11806:SF2 6 442 4.3E-245 T 22-04-2016 SII_RS08300 80c69cb9b7d5e6f8e23f82f516c52e8f 363 SUPERFAMILY SSF56281 35 339 3.77E-25 T 22-04-2016 IPR001279 Metallo-beta-lactamase SII_RS08300 80c69cb9b7d5e6f8e23f82f516c52e8f 363 Gene3D G3DSA:3.60.15.10 2 345 2.4E-121 T 22-04-2016 IPR001279 Metallo-beta-lactamase SII_RS08300 80c69cb9b7d5e6f8e23f82f516c52e8f 363 PANTHER PTHR15032:SF13 6 77 7.4E-133 T 22-04-2016 SII_RS08300 80c69cb9b7d5e6f8e23f82f516c52e8f 363 PANTHER PTHR15032:SF13 94 363 7.4E-133 T 22-04-2016 SII_RS08300 80c69cb9b7d5e6f8e23f82f516c52e8f 363 PANTHER PTHR15032 6 77 7.4E-133 T 22-04-2016 SII_RS08300 80c69cb9b7d5e6f8e23f82f516c52e8f 363 PANTHER PTHR15032 94 363 7.4E-133 T 22-04-2016 SII_RS08300 80c69cb9b7d5e6f8e23f82f516c52e8f 363 Pfam PF13483 Beta-lactamase superfamily domain 42 290 1.4E-13 T 22-04-2016 SII_RS06880 c9041dad707daf3270b6e631e0bb312c 521 SMART SM00062 27 264 6.1E-37 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SII_RS06880 c9041dad707daf3270b6e631e0bb312c 521 Gene3D G3DSA:3.40.190.10 117 211 5.6E-11 T 22-04-2016 SII_RS06880 c9041dad707daf3270b6e631e0bb312c 521 Gene3D G3DSA:3.40.190.10 225 259 5.8E-31 T 22-04-2016 SII_RS06880 c9041dad707daf3270b6e631e0bb312c 521 Gene3D G3DSA:3.40.190.10 25 116 5.8E-31 T 22-04-2016 SII_RS06880 c9041dad707daf3270b6e631e0bb312c 521 SUPERFAMILY SSF161098 289 488 1.18E-43 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SII_RS06880 c9041dad707daf3270b6e631e0bb312c 521 SUPERFAMILY SSF53850 1 251 4.25E-46 T 22-04-2016 SII_RS06880 c9041dad707daf3270b6e631e0bb312c 521 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 288 397 2.4E-20 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 SII_RS06880 c9041dad707daf3270b6e631e0bb312c 521 PANTHER PTHR30614:SF15 20 508 8.5E-141 T 22-04-2016 SII_RS06880 c9041dad707daf3270b6e631e0bb312c 521 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 338 502 1.0E-17 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SII_RS06880 c9041dad707daf3270b6e631e0bb312c 521 Gene3D G3DSA:1.10.3720.10 287 503 1.3E-55 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SII_RS06880 c9041dad707daf3270b6e631e0bb312c 521 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 28 252 1.2E-34 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SII_RS06880 c9041dad707daf3270b6e631e0bb312c 521 PANTHER PTHR30614 20 508 8.5E-141 T 22-04-2016 SII_RS03440 692bb50abd612da0c6e60e417a5c96b9 509 SUPERFAMILY SSF52540 334 502 4.71E-31 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS03440 692bb50abd612da0c6e60e417a5c96b9 509 Pfam PF00664 ABC transporter transmembrane region 41 274 4.5E-11 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SII_RS03440 692bb50abd612da0c6e60e417a5c96b9 509 Gene3D G3DSA:1.20.1560.10 4 294 6.6E-27 T 22-04-2016 SII_RS03440 692bb50abd612da0c6e60e417a5c96b9 509 PANTHER PTHR24220:SF70 316 500 1.2E-21 T 22-04-2016 SII_RS03440 692bb50abd612da0c6e60e417a5c96b9 509 SUPERFAMILY SSF90123 4 287 1.12E-29 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SII_RS03440 692bb50abd612da0c6e60e417a5c96b9 509 SMART SM00382 338 498 2.8E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain SII_RS03440 692bb50abd612da0c6e60e417a5c96b9 509 PANTHER PTHR24220 316 500 1.2E-21 T 22-04-2016 SII_RS03440 692bb50abd612da0c6e60e417a5c96b9 509 Gene3D G3DSA:3.40.50.300 334 500 6.6E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS03440 692bb50abd612da0c6e60e417a5c96b9 509 Pfam PF00005 ABC transporter 334 452 1.3E-17 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SII_RS09475 13de641034c6aeefd94948364a0dbb94 493 Pfam PF00571 CBS domain 100 145 6.9E-9 T 22-04-2016 IPR000644 CBS domain SII_RS09475 13de641034c6aeefd94948364a0dbb94 493 Pfam PF00571 CBS domain 160 206 4.0E-6 T 22-04-2016 IPR000644 CBS domain SII_RS09475 13de641034c6aeefd94948364a0dbb94 493 PIRSF PIRSF000130 3 493 1.5E-209 T 22-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 SII_RS09475 13de641034c6aeefd94948364a0dbb94 493 SUPERFAMILY SSF54631 99 210 1.39E-29 T 22-04-2016 SII_RS09475 13de641034c6aeefd94948364a0dbb94 493 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 12 492 83.569 T 22-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 SII_RS09475 13de641034c6aeefd94948364a0dbb94 493 PANTHER PTHR11911 1 287 3.2E-244 T 22-04-2016 SII_RS09475 13de641034c6aeefd94948364a0dbb94 493 PANTHER PTHR11911 305 491 3.2E-244 T 22-04-2016 SII_RS09475 13de641034c6aeefd94948364a0dbb94 493 SMART SM00116 163 211 1.3E-8 T 22-04-2016 IPR000644 CBS domain SII_RS09475 13de641034c6aeefd94948364a0dbb94 493 SMART SM00116 100 150 1.7E-9 T 22-04-2016 IPR000644 CBS domain SII_RS09475 13de641034c6aeefd94948364a0dbb94 493 Gene3D G3DSA:3.20.20.70 9 491 1.1E-201 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SII_RS09475 13de641034c6aeefd94948364a0dbb94 493 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 12 460 3.3E-193 T 22-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 SII_RS09475 13de641034c6aeefd94948364a0dbb94 493 SMART SM01240 11 479 0.0 T 22-04-2016 SII_RS09475 13de641034c6aeefd94948364a0dbb94 493 PANTHER PTHR11911:SF6 1 287 3.2E-244 T 22-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 SII_RS09475 13de641034c6aeefd94948364a0dbb94 493 PANTHER PTHR11911:SF6 305 491 3.2E-244 T 22-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 SII_RS09475 13de641034c6aeefd94948364a0dbb94 493 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 300 312 - T 22-04-2016 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 Reactome: REACT_1698 SII_RS09475 13de641034c6aeefd94948364a0dbb94 493 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 12 479 4.9E-160 T 22-04-2016 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 Reactome: REACT_1698 SII_RS09475 13de641034c6aeefd94948364a0dbb94 493 SUPERFAMILY SSF51412 222 483 1.01E-122 T 22-04-2016 SII_RS09475 13de641034c6aeefd94948364a0dbb94 493 SUPERFAMILY SSF51412 8 94 1.01E-122 T 22-04-2016 SII_RS06220 a1d87d0b55edbbb93d726dfd53734dd0 210 PANTHER PTHR34582 3 210 2.3E-64 T 22-04-2016 SII_RS06220 a1d87d0b55edbbb93d726dfd53734dd0 210 Gene3D G3DSA:3.30.240.20 83 155 2.6E-22 T 22-04-2016 IPR023090 Uncharacterised domain UPF0702, alpha/beta domain SII_RS06220 a1d87d0b55edbbb93d726dfd53734dd0 210 Gene3D G3DSA:3.30.240.20 156 210 1.6E-16 T 22-04-2016 IPR023090 Uncharacterised domain UPF0702, alpha/beta domain SII_RS06220 a1d87d0b55edbbb93d726dfd53734dd0 210 PANTHER PTHR34582:SF6 3 210 2.3E-64 T 22-04-2016 SII_RS06220 a1d87d0b55edbbb93d726dfd53734dd0 210 Pfam PF04239 Protein of unknown function (DUF421) 90 190 2.4E-29 T 22-04-2016 IPR007353 Protein of unknown function DUF421 SII_RS00470 d49fee08dafaadd74d8ed733503a3f5e 215 Pfam PF04854 Protein of unknown function, DUF624 29 101 6.6E-11 T 22-04-2016 IPR006938 Protein of unknown function DUF624 SII_RS08340 12b151bf403afc2e040e777043a63aac 706 SMART SM01086 609 696 1.3E-26 T 22-04-2016 IPR019489 Clp ATPase, C-terminal SII_RS08340 12b151bf403afc2e040e777043a63aac 706 Gene3D G3DSA:3.40.50.300 76 258 1.6E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS08340 12b151bf403afc2e040e777043a63aac 706 Gene3D G3DSA:1.10.8.60 260 341 7.3E-25 T 22-04-2016 SII_RS08340 12b151bf403afc2e040e777043a63aac 706 SMART SM00382 112 259 3.7E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain SII_RS08340 12b151bf403afc2e040e777043a63aac 706 SMART SM00382 443 590 6.3E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain SII_RS08340 12b151bf403afc2e040e777043a63aac 706 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 609 678 3.3E-21 T 22-04-2016 IPR019489 Clp ATPase, C-terminal SII_RS08340 12b151bf403afc2e040e777043a63aac 706 SUPERFAMILY SSF52540 77 351 9.3E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS08340 12b151bf403afc2e040e777043a63aac 706 PANTHER PTHR11638:SF101 74 698 0.0 T 22-04-2016 SII_RS08340 12b151bf403afc2e040e777043a63aac 706 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 555 569 6.7E-28 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 SII_RS08340 12b151bf403afc2e040e777043a63aac 706 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 522 540 6.7E-28 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 SII_RS08340 12b151bf403afc2e040e777043a63aac 706 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 447 465 6.7E-28 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 SII_RS08340 12b151bf403afc2e040e777043a63aac 706 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 492 510 6.7E-28 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 SII_RS08340 12b151bf403afc2e040e777043a63aac 706 Gene3D G3DSA:1.10.8.60 621 702 7.4E-27 T 22-04-2016 SII_RS08340 12b151bf403afc2e040e777043a63aac 706 Pfam PF07724 AAA domain (Cdc48 subfamily) 442 602 2.7E-42 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 SII_RS08340 12b151bf403afc2e040e777043a63aac 706 Gene3D G3DSA:3.40.50.300 399 620 5.0E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS08340 12b151bf403afc2e040e777043a63aac 706 SUPERFAMILY SSF52540 392 678 4.83E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS08340 12b151bf403afc2e040e777043a63aac 706 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 477 495 - T 22-04-2016 IPR028299 ClpA/B, conserved site 2 SII_RS08340 12b151bf403afc2e040e777043a63aac 706 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 117 249 2.2E-14 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 SII_RS08340 12b151bf403afc2e040e777043a63aac 706 PANTHER PTHR11638 74 698 0.0 T 22-04-2016 SII_RS08050 391a19498eff2cb868aaf2d8ec18d587 204 Hamap MF_00163 Peptide deformylase [def]. 15 203 24.479 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 SII_RS08050 391a19498eff2cb868aaf2d8ec18d587 204 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 17 196 1.1E-35 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 SII_RS08050 391a19498eff2cb868aaf2d8ec18d587 204 PRINTS PR01576 Peptide deformylase signature 161 190 1.1E-28 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 SII_RS08050 391a19498eff2cb868aaf2d8ec18d587 204 PRINTS PR01576 Peptide deformylase signature 59 88 1.1E-28 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 SII_RS08050 391a19498eff2cb868aaf2d8ec18d587 204 PRINTS PR01576 Peptide deformylase signature 142 160 1.1E-28 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 SII_RS08050 391a19498eff2cb868aaf2d8ec18d587 204 PRINTS PR01576 Peptide deformylase signature 129 140 1.1E-28 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 SII_RS08050 391a19498eff2cb868aaf2d8ec18d587 204 PANTHER PTHR10458 16 204 1.1E-92 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 SII_RS08050 391a19498eff2cb868aaf2d8ec18d587 204 Pfam PF01327 Polypeptide deformylase 16 192 6.8E-42 T 22-04-2016 IPR023635 Peptide deformylase SII_RS08050 391a19498eff2cb868aaf2d8ec18d587 204 PANTHER PTHR10458:SF8 16 204 1.1E-92 T 22-04-2016 SII_RS08050 391a19498eff2cb868aaf2d8ec18d587 204 SUPERFAMILY SSF56420 7 201 1.57E-55 T 22-04-2016 IPR023635 Peptide deformylase SII_RS08050 391a19498eff2cb868aaf2d8ec18d587 204 Gene3D G3DSA:3.90.45.10 16 200 2.6E-50 T 22-04-2016 IPR023635 Peptide deformylase SII_RS08050 391a19498eff2cb868aaf2d8ec18d587 204 PIRSF PIRSF004749 4 204 5.7E-41 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 SII_RS05850 ee69cbc580b5e5789396978a7f38efd0 157 PRINTS PR01467 Bacterial arginine repressor signature 38 53 1.0E-17 T 22-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 SII_RS05850 ee69cbc580b5e5789396978a7f38efd0 157 PRINTS PR01467 Bacterial arginine repressor signature 118 133 1.0E-17 T 22-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 SII_RS05850 ee69cbc580b5e5789396978a7f38efd0 157 PRINTS PR01467 Bacterial arginine repressor signature 22 35 1.0E-17 T 22-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 SII_RS05850 ee69cbc580b5e5789396978a7f38efd0 157 PRINTS PR01467 Bacterial arginine repressor signature 88 101 1.0E-17 T 22-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 SII_RS05850 ee69cbc580b5e5789396978a7f38efd0 157 ProDom PD007402 ARGININE REPRESSOR TRANSCRIPTION BIOSYNTHESIS DNA-BINDING REGULATION AMINO-ACID ARGR TRANSCRIPTIONAL FAMILY 91 126 1.0E-11 T 22-04-2016 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 UniPathway: UPA00068 SII_RS05850 ee69cbc580b5e5789396978a7f38efd0 157 PANTHER PTHR34471 1 153 1.3E-40 T 22-04-2016 SII_RS05850 ee69cbc580b5e5789396978a7f38efd0 157 PANTHER PTHR34471:SF1 1 153 1.3E-40 T 22-04-2016 SII_RS05850 ee69cbc580b5e5789396978a7f38efd0 157 Pfam PF02863 Arginine repressor, C-terminal domain 81 146 2.2E-20 T 22-04-2016 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 UniPathway: UPA00068 SII_RS05850 ee69cbc580b5e5789396978a7f38efd0 157 Hamap MF_00173 Arginine repressor [argR]. 1 152 51.006 T 22-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 SII_RS05850 ee69cbc580b5e5789396978a7f38efd0 157 Gene3D G3DSA:3.30.1360.40 72 148 8.8E-25 T 22-04-2016 IPR024946 Arginine repressor C-terminal-like domain SII_RS05850 ee69cbc580b5e5789396978a7f38efd0 157 Gene3D G3DSA:1.10.10.10 10 62 1.4E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SII_RS05850 ee69cbc580b5e5789396978a7f38efd0 157 SUPERFAMILY SSF55252 79 148 1.03E-19 T 22-04-2016 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 UniPathway: UPA00068 SII_RS05850 ee69cbc580b5e5789396978a7f38efd0 157 Pfam PF01316 Arginine repressor, DNA binding domain 5 64 9.9E-20 T 22-04-2016 IPR020900 Arginine repressor, DNA-binding domain GO:0003700|GO:0006355|GO:0006525 UniPathway: UPA00068 SII_RS05850 ee69cbc580b5e5789396978a7f38efd0 157 SUPERFAMILY SSF46785 6 76 1.31E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SII_RS04040 ed6277be9e90694b31f2914df3329b79 418 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 7 417 51.705 T 22-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 SII_RS04040 ed6277be9e90694b31f2914df3329b79 418 PIRSF PIRSF000412 1 418 3.3E-161 T 22-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 SII_RS04040 ed6277be9e90694b31f2914df3329b79 418 Gene3D G3DSA:3.40.640.10 37 285 6.6E-105 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SII_RS04040 ed6277be9e90694b31f2914df3329b79 418 Gene3D G3DSA:3.90.1150.10 286 417 8.0E-47 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SII_RS04040 ed6277be9e90694b31f2914df3329b79 418 Pfam PF00464 Serine hydroxymethyltransferase 9 386 9.1E-169 T 22-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 SII_RS04040 ed6277be9e90694b31f2914df3329b79 418 SUPERFAMILY SSF53383 6 417 1.67E-172 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SII_RS04040 ed6277be9e90694b31f2914df3329b79 418 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 222 238 - T 22-04-2016 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0004372|GO:0006544|GO:0006563|GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 SII_RS04040 ed6277be9e90694b31f2914df3329b79 418 PANTHER PTHR11680 9 416 2.6E-237 T 22-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 SII_RS05280 9bd1195eaf2e8a9c8a548c0ee2ebdc1f 227 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 4 218 2.0E-83 T 22-04-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 SII_RS05280 9bd1195eaf2e8a9c8a548c0ee2ebdc1f 227 Gene3D G3DSA:3.30.70.260 142 201 1.5E-23 T 22-04-2016 SII_RS05280 9bd1195eaf2e8a9c8a548c0ee2ebdc1f 227 PANTHER PTHR11934 1 227 2.1E-94 T 22-04-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 SII_RS05280 9bd1195eaf2e8a9c8a548c0ee2ebdc1f 227 SUPERFAMILY SSF100950 2 148 1.95E-43 T 22-04-2016 SII_RS05280 9bd1195eaf2e8a9c8a548c0ee2ebdc1f 227 Gene3D G3DSA:3.40.50.1360 2 141 2.0E-59 T 22-04-2016 SII_RS05280 9bd1195eaf2e8a9c8a548c0ee2ebdc1f 227 SUPERFAMILY SSF75445 127 203 3.01E-20 T 22-04-2016 SII_RS05280 9bd1195eaf2e8a9c8a548c0ee2ebdc1f 227 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 1 221 33.981 T 22-04-2016 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 SII_RS05280 9bd1195eaf2e8a9c8a548c0ee2ebdc1f 227 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 50 217 9.8E-58 T 22-04-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 SII_RS00240 777d57e5e7487f601e6e332faccc9902 479 Gene3D G3DSA:3.40.50.2020 270 435 6.9E-45 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like SII_RS00240 777d57e5e7487f601e6e332faccc9902 479 SUPERFAMILY SSF53271 248 465 6.42E-75 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like SII_RS00240 777d57e5e7487f601e6e332faccc9902 479 PANTHER PTHR11907 9 471 4.4E-230 T 22-04-2016 SII_RS00240 777d57e5e7487f601e6e332faccc9902 479 Pfam PF00156 Phosphoribosyl transferase domain 272 385 3.3E-9 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 SII_RS00240 777d57e5e7487f601e6e332faccc9902 479 Gene3D G3DSA:3.60.20.10 12 255 1.1E-63 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SII_RS00240 777d57e5e7487f601e6e332faccc9902 479 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 11 459 45.957 T 22-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 SII_RS00240 777d57e5e7487f601e6e332faccc9902 479 SUPERFAMILY SSF56235 12 239 1.2E-65 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SII_RS00240 777d57e5e7487f601e6e332faccc9902 479 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 12 458 2.4E-155 T 22-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 SII_RS00240 777d57e5e7487f601e6e332faccc9902 479 PANTHER PTHR11907:SF0 9 471 4.4E-230 T 22-04-2016 SII_RS00240 777d57e5e7487f601e6e332faccc9902 479 Pfam PF13522 Glutamine amidotransferase domain 74 206 5.6E-18 T 22-04-2016 SII_RS00240 777d57e5e7487f601e6e332faccc9902 479 PIRSF PIRSF000485 8 472 1.2E-174 T 22-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 SII_RS04205 4de473be9ee7f3c77841c1b4f07d230f 327 Gene3D G3DSA:3.90.110.10 149 315 1.3E-60 T 22-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 SII_RS04205 4de473be9ee7f3c77841c1b4f07d230f 327 PIRSF PIRSF000102 4 322 2.1E-104 T 22-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 SII_RS04205 4de473be9ee7f3c77841c1b4f07d230f 327 PANTHER PTHR11540:SF3 4 326 1.8E-151 T 22-04-2016 SII_RS04205 4de473be9ee7f3c77841c1b4f07d230f 327 TIGRFAM TIGR01771 L-LDH-NAD: L-lactate dehydrogenase 12 310 6.3E-124 T 22-04-2016 IPR011304 L-lactate dehydrogenase GO:0004459|GO:0005737|GO:0055114 KEGG: 00010+1.1.1.27|KEGG: 00270+1.1.1.27|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-6901|UniPathway: UPA00554 SII_RS04205 4de473be9ee7f3c77841c1b4f07d230f 327 PANTHER PTHR11540 4 326 1.8E-151 T 22-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 SII_RS04205 4de473be9ee7f3c77841c1b4f07d230f 327 SUPERFAMILY SSF56327 147 315 2.16E-55 T 22-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 SII_RS04205 4de473be9ee7f3c77841c1b4f07d230f 327 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 149 317 4.8E-42 T 22-04-2016 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 SII_RS04205 4de473be9ee7f3c77841c1b4f07d230f 327 PRINTS PR00086 L-lactate dehydrogenase signature 34 58 8.4E-49 T 22-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 SII_RS04205 4de473be9ee7f3c77841c1b4f07d230f 327 PRINTS PR00086 L-lactate dehydrogenase signature 174 187 8.4E-49 T 22-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 SII_RS04205 4de473be9ee7f3c77841c1b4f07d230f 327 PRINTS PR00086 L-lactate dehydrogenase signature 9 33 8.4E-49 T 22-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 SII_RS04205 4de473be9ee7f3c77841c1b4f07d230f 327 PRINTS PR00086 L-lactate dehydrogenase signature 120 140 8.4E-49 T 22-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 SII_RS04205 4de473be9ee7f3c77841c1b4f07d230f 327 PRINTS PR00086 L-lactate dehydrogenase signature 144 162 8.4E-49 T 22-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 SII_RS04205 4de473be9ee7f3c77841c1b4f07d230f 327 SUPERFAMILY SSF51735 4 148 3.05E-52 T 22-04-2016 IPR016040 NAD(P)-binding domain SII_RS04205 4de473be9ee7f3c77841c1b4f07d230f 327 Hamap MF_00488 L-lactate dehydrogenase [ldh]. 7 316 44.985 T 22-04-2016 IPR011304 L-lactate dehydrogenase GO:0004459|GO:0005737|GO:0055114 KEGG: 00010+1.1.1.27|KEGG: 00270+1.1.1.27|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-6901|UniPathway: UPA00554 SII_RS04205 4de473be9ee7f3c77841c1b4f07d230f 327 Gene3D G3DSA:3.40.50.720 8 148 6.7E-52 T 22-04-2016 IPR016040 NAD(P)-binding domain SII_RS04205 4de473be9ee7f3c77841c1b4f07d230f 327 ProSitePatterns PS00064 L-lactate dehydrogenase active site. 176 182 - T 22-04-2016 IPR018177 L-lactate dehydrogenase, active site GO:0004459|GO:0055114 KEGG: 00010+1.1.1.27|KEGG: 00270+1.1.1.27|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-6901|UniPathway: UPA00554 SII_RS04205 4de473be9ee7f3c77841c1b4f07d230f 327 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 9 146 6.7E-47 T 22-04-2016 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 SII_RS07775 c259d1e4ab07bbe6ac9a0cbda0ddc144 675 SUPERFAMILY SSF49401 30 170 4.85E-28 T 22-04-2016 IPR008966 Adhesion domain SII_RS07775 c259d1e4ab07bbe6ac9a0cbda0ddc144 675 Gene3D G3DSA:2.60.40.1120 345 413 8.5E-5 T 22-04-2016 IPR014766 Carboxypeptidase, regulatory domain SII_RS07775 c259d1e4ab07bbe6ac9a0cbda0ddc144 675 PANTHER PTHR36108 290 495 5.1E-13 T 22-04-2016 SII_RS07775 c259d1e4ab07bbe6ac9a0cbda0ddc144 675 Pfam PF05738 Cna protein B-type domain 352 406 4.4E-11 T 22-04-2016 IPR008454 Collagen-binding surface protein Cna-like, B-type domain SII_RS07775 c259d1e4ab07bbe6ac9a0cbda0ddc144 675 Pfam PF05738 Cna protein B-type domain 447 502 9.0E-6 T 22-04-2016 IPR008454 Collagen-binding surface protein Cna-like, B-type domain SII_RS07775 c259d1e4ab07bbe6ac9a0cbda0ddc144 675 PANTHER PTHR36108:SF2 290 495 5.1E-13 T 22-04-2016 SII_RS07775 c259d1e4ab07bbe6ac9a0cbda0ddc144 675 SUPERFAMILY SSF49401 187 327 5.34E-12 T 22-04-2016 IPR008966 Adhesion domain SII_RS07775 c259d1e4ab07bbe6ac9a0cbda0ddc144 675 Gene3D G3DSA:2.60.40.1140 539 642 9.3E-27 T 22-04-2016 IPR008970 Collagen-binding surface protein Cna, B-type domain SII_RS07775 c259d1e4ab07bbe6ac9a0cbda0ddc144 675 SUPERFAMILY SSF49478 345 411 3.92E-7 T 22-04-2016 SII_RS07775 c259d1e4ab07bbe6ac9a0cbda0ddc144 675 SUPERFAMILY SSF49478 539 620 1.35E-22 T 22-04-2016 SII_RS07775 c259d1e4ab07bbe6ac9a0cbda0ddc144 675 Gene3D G3DSA:2.60.40.1280 41 172 2.0E-35 T 22-04-2016 IPR011252 Fibrogen-binding domain 1 GO:0005618|GO:0007155 SII_RS07775 c259d1e4ab07bbe6ac9a0cbda0ddc144 675 Pfam PF05737 Collagen binding domain 187 318 1.8E-7 T 22-04-2016 IPR008456 Collagen binding domain GO:0005518 SII_RS03815 0cb5c6590a935de128361fd040b93461 349 PANTHER PTHR41320 3 348 2.4E-67 T 22-04-2016 SII_RS03815 0cb5c6590a935de128361fd040b93461 349 Pfam PF13303 Phosphotransferase system, EIIC 17 340 2.5E-81 T 22-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 SII_RS02885 1eea17d4053a4d1de8a6559dc66913ee 709 Pfam PF12836 Helix-hairpin-helix motif 474 538 6.6E-26 T 22-04-2016 SII_RS02885 1eea17d4053a4d1de8a6559dc66913ee 709 SUPERFAMILY SSF47781 453 541 8.89E-25 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 SII_RS02885 1eea17d4053a4d1de8a6559dc66913ee 709 SMART SM00316 632 703 5.5E-20 T 22-04-2016 IPR022967 RNA-binding domain, S1 SII_RS02885 1eea17d4053a4d1de8a6559dc66913ee 709 Pfam PF16921 Tex protein YqgF-like domain 308 434 2.9E-53 T 22-04-2016 IPR032639 Tex protein, YqgF-like domain SII_RS02885 1eea17d4053a4d1de8a6559dc66913ee 709 SUPERFAMILY SSF53098 304 452 1.71E-47 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SII_RS02885 1eea17d4053a4d1de8a6559dc66913ee 709 PANTHER PTHR10724:SF1 1 707 0.0 T 22-04-2016 SII_RS02885 1eea17d4053a4d1de8a6559dc66913ee 709 Gene3D G3DSA:1.10.150.310 482 613 1.4E-43 T 22-04-2016 IPR023097 Tex RuvX-like domain SII_RS02885 1eea17d4053a4d1de8a6559dc66913ee 709 Pfam PF00575 S1 RNA binding domain 631 702 1.6E-15 T 22-04-2016 IPR003029 S1 domain GO:0003676 SII_RS02885 1eea17d4053a4d1de8a6559dc66913ee 709 Gene3D G3DSA:2.40.50.140 622 702 1.7E-24 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SII_RS02885 1eea17d4053a4d1de8a6559dc66913ee 709 SUPERFAMILY SSF50249 619 703 2.01E-21 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SII_RS02885 1eea17d4053a4d1de8a6559dc66913ee 709 SUPERFAMILY SSF158832 7 303 1.2E-97 T 22-04-2016 SII_RS02885 1eea17d4053a4d1de8a6559dc66913ee 709 Gene3D G3DSA:1.10.10.650 5 108 3.1E-40 T 22-04-2016 IPR023319 Tex-like protein, HTH domain SII_RS02885 1eea17d4053a4d1de8a6559dc66913ee 709 Pfam PF09371 Tex-like protein N-terminal domain 8 188 1.2E-60 T 22-04-2016 IPR018974 Tex-like protein, N-terminal SII_RS02885 1eea17d4053a4d1de8a6559dc66913ee 709 Gene3D G3DSA:3.30.420.140 308 433 3.5E-49 T 22-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 SII_RS02885 1eea17d4053a4d1de8a6559dc66913ee 709 Gene3D G3DSA:1.10.3500.10 434 481 4.4E-81 T 22-04-2016 IPR023323 Tex-like domain SII_RS02885 1eea17d4053a4d1de8a6559dc66913ee 709 Gene3D G3DSA:1.10.3500.10 109 304 4.4E-81 T 22-04-2016 IPR023323 Tex-like domain SII_RS02885 1eea17d4053a4d1de8a6559dc66913ee 709 PANTHER PTHR10724 1 707 0.0 T 22-04-2016 SII_RS02885 1eea17d4053a4d1de8a6559dc66913ee 709 SUPERFAMILY SSF47781 543 614 5.23E-17 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 SII_RS02885 1eea17d4053a4d1de8a6559dc66913ee 709 SMART SM00732 308 407 3.9E-36 T 22-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 SII_RS00620 3d03f079dfc0fa08e5e255e700c7d0f6 750 Pfam PF00122 E1-E2 ATPase 206 426 1.3E-70 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 SII_RS00620 3d03f079dfc0fa08e5e255e700c7d0f6 750 SUPERFAMILY SSF81665 202 238 3.92E-13 T 22-04-2016 SII_RS00620 3d03f079dfc0fa08e5e255e700c7d0f6 750 SUPERFAMILY SSF81665 335 429 3.92E-13 T 22-04-2016 SII_RS00620 3d03f079dfc0fa08e5e255e700c7d0f6 750 SUPERFAMILY SSF81665 683 733 3.92E-13 T 22-04-2016 SII_RS00620 3d03f079dfc0fa08e5e255e700c7d0f6 750 SUPERFAMILY SSF81653 237 334 6.41E-29 T 22-04-2016 SII_RS00620 3d03f079dfc0fa08e5e255e700c7d0f6 750 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 206 714 3.8E-98 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 SII_RS00620 3d03f079dfc0fa08e5e255e700c7d0f6 750 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 581 591 1.5E-28 T 22-04-2016 SII_RS00620 3d03f079dfc0fa08e5e255e700c7d0f6 750 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 657 669 1.5E-28 T 22-04-2016 SII_RS00620 3d03f079dfc0fa08e5e255e700c7d0f6 750 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 435 449 1.5E-28 T 22-04-2016 SII_RS00620 3d03f079dfc0fa08e5e255e700c7d0f6 750 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 559 570 1.5E-28 T 22-04-2016 SII_RS00620 3d03f079dfc0fa08e5e255e700c7d0f6 750 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 284 298 1.5E-28 T 22-04-2016 SII_RS00620 3d03f079dfc0fa08e5e255e700c7d0f6 750 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 634 653 1.5E-28 T 22-04-2016 SII_RS00620 3d03f079dfc0fa08e5e255e700c7d0f6 750 Gene3D G3DSA:2.70.150.10 186 335 5.0E-37 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 SII_RS00620 3d03f079dfc0fa08e5e255e700c7d0f6 750 PANTHER PTHR24093:SF50 3 747 3.3E-254 T 22-04-2016 SII_RS00620 3d03f079dfc0fa08e5e255e700c7d0f6 750 SUPERFAMILY SSF56784 433 453 4.84E-57 T 22-04-2016 IPR023214 HAD-like domain SII_RS00620 3d03f079dfc0fa08e5e255e700c7d0f6 750 SUPERFAMILY SSF56784 492 741 4.84E-57 T 22-04-2016 IPR023214 HAD-like domain SII_RS00620 3d03f079dfc0fa08e5e255e700c7d0f6 750 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 166 743 1.7E-196 T 22-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 SII_RS00620 3d03f079dfc0fa08e5e255e700c7d0f6 750 Gene3D G3DSA:3.40.1110.10 449 561 1.7E-25 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 SII_RS00620 3d03f079dfc0fa08e5e255e700c7d0f6 750 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 147 744 2.5E-186 T 22-04-2016 SII_RS00620 3d03f079dfc0fa08e5e255e700c7d0f6 750 Pfam PF00702 haloacid dehalogenase-like hydrolase 431 647 2.7E-46 T 22-04-2016 SII_RS00620 3d03f079dfc0fa08e5e255e700c7d0f6 750 Gene3D G3DSA:3.40.50.1000 562 702 2.1E-57 T 22-04-2016 IPR023214 HAD-like domain SII_RS00620 3d03f079dfc0fa08e5e255e700c7d0f6 750 Gene3D G3DSA:3.40.50.1000 406 448 2.1E-57 T 22-04-2016 IPR023214 HAD-like domain SII_RS00620 3d03f079dfc0fa08e5e255e700c7d0f6 750 ProSitePatterns PS01047 Heavy-metal-associated domain. 10 39 - T 22-04-2016 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 SII_RS00620 3d03f079dfc0fa08e5e255e700c7d0f6 750 Pfam PF00403 Heavy-metal-associated domain 9 46 9.2E-10 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 SII_RS00620 3d03f079dfc0fa08e5e255e700c7d0f6 750 PRINTS PR00943 Copper-transporting ATPase signature 668 682 1.2E-13 T 22-04-2016 SII_RS00620 3d03f079dfc0fa08e5e255e700c7d0f6 750 PRINTS PR00943 Copper-transporting ATPase signature 204 223 1.2E-13 T 22-04-2016 SII_RS00620 3d03f079dfc0fa08e5e255e700c7d0f6 750 PRINTS PR00943 Copper-transporting ATPase signature 357 371 1.2E-13 T 22-04-2016 SII_RS00620 3d03f079dfc0fa08e5e255e700c7d0f6 750 PRINTS PR00943 Copper-transporting ATPase signature 418 433 1.2E-13 T 22-04-2016 SII_RS00620 3d03f079dfc0fa08e5e255e700c7d0f6 750 PRINTS PR00943 Copper-transporting ATPase signature 611 628 1.2E-13 T 22-04-2016 SII_RS00620 3d03f079dfc0fa08e5e255e700c7d0f6 750 PRINTS PR00943 Copper-transporting ATPase signature 48 68 1.2E-13 T 22-04-2016 SII_RS00620 3d03f079dfc0fa08e5e255e700c7d0f6 750 PRINTS PR00943 Copper-transporting ATPase signature 224 242 1.2E-13 T 22-04-2016 SII_RS00620 3d03f079dfc0fa08e5e255e700c7d0f6 750 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 437 443 - T 22-04-2016 IPR018303 P-type ATPase, phosphorylation site SII_RS00620 3d03f079dfc0fa08e5e255e700c7d0f6 750 PANTHER PTHR24093 3 747 3.3E-254 T 22-04-2016 SII_RS00620 3d03f079dfc0fa08e5e255e700c7d0f6 750 Gene3D G3DSA:3.30.70.100 5 69 2.9E-18 T 22-04-2016 SII_RS00620 3d03f079dfc0fa08e5e255e700c7d0f6 750 SUPERFAMILY SSF55008 5 70 4.58E-16 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 SII_RS05300 88c5b08d46cb1116a1d17a6c4d261fdc 1251 Pfam PF01183 Glycosyl hydrolases family 25 137 322 1.8E-38 T 22-04-2016 IPR002053 Glycoside hydrolase, family 25 GO:0003796|GO:0009253|GO:0016998 SII_RS05300 88c5b08d46cb1116a1d17a6c4d261fdc 1251 SUPERFAMILY SSF51445 136 339 4.63E-36 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily SII_RS05300 88c5b08d46cb1116a1d17a6c4d261fdc 1251 ProSitePatterns PS00953 Glycosyl hydrolases family 25 active sites signature. 138 174 - T 22-04-2016 IPR008270 Glycoside hydrolase, family 25, active site GO:0003796|GO:0009253|GO:0016998 SII_RS05300 88c5b08d46cb1116a1d17a6c4d261fdc 1251 Gene3D G3DSA:3.20.20.80 132 337 2.6E-50 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 SII_RS05300 88c5b08d46cb1116a1d17a6c4d261fdc 1251 Pfam PF08481 GBS Bsp-like repeat 564 655 5.5E-32 T 22-04-2016 IPR013688 GBS Bsp-like SII_RS05300 88c5b08d46cb1116a1d17a6c4d261fdc 1251 Pfam PF08481 GBS Bsp-like repeat 460 551 3.9E-33 T 22-04-2016 IPR013688 GBS Bsp-like SII_RS05300 88c5b08d46cb1116a1d17a6c4d261fdc 1251 Pfam PF08481 GBS Bsp-like repeat 668 758 6.8E-33 T 22-04-2016 IPR013688 GBS Bsp-like SII_RS05300 88c5b08d46cb1116a1d17a6c4d261fdc 1251 Pfam PF08481 GBS Bsp-like repeat 982 1070 5.7E-33 T 22-04-2016 IPR013688 GBS Bsp-like SII_RS05300 88c5b08d46cb1116a1d17a6c4d261fdc 1251 Pfam PF08481 GBS Bsp-like repeat 357 447 1.5E-33 T 22-04-2016 IPR013688 GBS Bsp-like SII_RS05300 88c5b08d46cb1116a1d17a6c4d261fdc 1251 Pfam PF08481 GBS Bsp-like repeat 874 965 7.0E-31 T 22-04-2016 IPR013688 GBS Bsp-like SII_RS05300 88c5b08d46cb1116a1d17a6c4d261fdc 1251 Pfam PF08481 GBS Bsp-like repeat 771 861 3.6E-33 T 22-04-2016 IPR013688 GBS Bsp-like SII_RS05300 88c5b08d46cb1116a1d17a6c4d261fdc 1251 SMART SM00641 137 246 1.3E-8 T 22-04-2016 IPR018077 Glycoside hydrolase, family 25 subgroup SII_RS06195 65ee5760a7dd70736047fc4c32eecad2 326 SMART SM00387 216 322 5.5E-18 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SII_RS06195 65ee5760a7dd70736047fc4c32eecad2 326 PRINTS PR00344 Bacterial sensor protein C-terminal signature 282 300 2.2E-5 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SII_RS06195 65ee5760a7dd70736047fc4c32eecad2 326 PRINTS PR00344 Bacterial sensor protein C-terminal signature 306 319 2.2E-5 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SII_RS06195 65ee5760a7dd70736047fc4c32eecad2 326 PRINTS PR00344 Bacterial sensor protein C-terminal signature 248 262 2.2E-5 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SII_RS06195 65ee5760a7dd70736047fc4c32eecad2 326 PRINTS PR00344 Bacterial sensor protein C-terminal signature 266 276 2.2E-5 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SII_RS06195 65ee5760a7dd70736047fc4c32eecad2 326 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 218 321 5.3E-14 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SII_RS06195 65ee5760a7dd70736047fc4c32eecad2 326 SUPERFAMILY SSF55874 163 319 8.91E-26 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SII_RS06195 65ee5760a7dd70736047fc4c32eecad2 326 Gene3D G3DSA:3.30.565.10 178 318 9.1E-25 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SII_RS06195 65ee5760a7dd70736047fc4c32eecad2 326 PANTHER PTHR24423 1 18 1.3E-84 T 22-04-2016 SII_RS06195 65ee5760a7dd70736047fc4c32eecad2 326 PANTHER PTHR24423 93 318 1.3E-84 T 22-04-2016 SII_RS06195 65ee5760a7dd70736047fc4c32eecad2 326 PANTHER PTHR24423:SF557 1 18 1.3E-84 T 22-04-2016 SII_RS06195 65ee5760a7dd70736047fc4c32eecad2 326 PANTHER PTHR24423:SF557 93 318 1.3E-84 T 22-04-2016 SII_RS05545 d6c6fd43eb8cb6edcfe8b7873b0dfc14 692 Gene3D G3DSA:2.70.98.10 4 278 3.9E-47 T 22-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 SII_RS05545 d6c6fd43eb8cb6edcfe8b7873b0dfc14 692 Gene3D G3DSA:1.20.1610.10 398 553 8.2E-56 T 22-04-2016 SII_RS05545 d6c6fd43eb8cb6edcfe8b7873b0dfc14 692 TIGRFAM TIGR01180 aman2_put: putative alpha-1,2-mannosidase 209 686 1.6E-112 T 22-04-2016 IPR005887 Alpha-1,2-mannosidase, putative KEGG: 00130+3.2.1.-|KEGG: 00531+3.2.1.- SII_RS05545 d6c6fd43eb8cb6edcfe8b7873b0dfc14 692 Pfam PF07971 Glycosyl hydrolase family 92 207 686 9.9E-117 T 22-04-2016 IPR012939 Glycosyl hydrolase family 92 SII_RS05545 d6c6fd43eb8cb6edcfe8b7873b0dfc14 692 SUPERFAMILY SSF48208 228 670 2.38E-22 T 22-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 SII_RS05545 d6c6fd43eb8cb6edcfe8b7873b0dfc14 692 Gene3D G3DSA:1.20.1050.60 305 394 1.4E-23 T 22-04-2016 SII_RS05545 d6c6fd43eb8cb6edcfe8b7873b0dfc14 692 PANTHER PTHR12143 1 686 1.6E-127 T 22-04-2016 SII_RS05545 d6c6fd43eb8cb6edcfe8b7873b0dfc14 692 PANTHER PTHR12143:SF22 1 686 1.6E-127 T 22-04-2016 SII_RS05545 d6c6fd43eb8cb6edcfe8b7873b0dfc14 692 Gene3D G3DSA:3.30.2080.10 554 687 1.0E-41 T 22-04-2016 SII_RS01860 cff3970d5ab7346679b5e1dac6207921 236 Pfam PF02616 Segregation and condensation protein ScpA 18 230 4.0E-29 T 22-04-2016 IPR003768 Segregation and condensation protein A SII_RS01860 cff3970d5ab7346679b5e1dac6207921 236 PANTHER PTHR33969:SF2 1 236 3.2E-64 T 22-04-2016 SII_RS01860 cff3970d5ab7346679b5e1dac6207921 236 PANTHER PTHR33969 1 236 3.2E-64 T 22-04-2016 SII_RS01860 cff3970d5ab7346679b5e1dac6207921 236 Hamap MF_01805 Segregation and condensation protein A [scpA]. 1 234 24.866 T 22-04-2016 IPR003768 Segregation and condensation protein A SII_RS07210 dcbf8f0f91e2757e356809bbd8ec1037 287 SUPERFAMILY SSF52096 33 284 1.71E-74 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SII_RS07210 dcbf8f0f91e2757e356809bbd8ec1037 287 Pfam PF01039 Carboxyl transferase domain 66 245 3.0E-17 T 22-04-2016 IPR000022 Carboxyl transferase KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 SII_RS07210 dcbf8f0f91e2757e356809bbd8ec1037 287 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 1 285 38.719 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 SII_RS07210 dcbf8f0f91e2757e356809bbd8ec1037 287 PANTHER PTHR22855:SF17 17 283 3.6E-135 T 22-04-2016 SII_RS07210 dcbf8f0f91e2757e356809bbd8ec1037 287 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 133 147 4.3E-36 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 SII_RS07210 dcbf8f0f91e2757e356809bbd8ec1037 287 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 255 264 4.3E-36 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 SII_RS07210 dcbf8f0f91e2757e356809bbd8ec1037 287 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 233 244 4.3E-36 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 SII_RS07210 dcbf8f0f91e2757e356809bbd8ec1037 287 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 204 221 4.3E-36 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 SII_RS07210 dcbf8f0f91e2757e356809bbd8ec1037 287 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 167 185 4.3E-36 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 SII_RS07210 dcbf8f0f91e2757e356809bbd8ec1037 287 PANTHER PTHR22855 17 283 3.6E-135 T 22-04-2016 SII_RS07210 dcbf8f0f91e2757e356809bbd8ec1037 287 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 21 283 4.8E-105 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 SII_RS07210 dcbf8f0f91e2757e356809bbd8ec1037 287 Gene3D G3DSA:3.90.226.10 27 284 1.7E-71 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SII_RS00330 e340d568f87bfdad87b3e64dfede1f72 237 ProSitePatterns PS00221 MIP family signature. 62 70 - T 22-04-2016 IPR022357 Major intrinsic protein, conserved site GO:0005215|GO:0006810|GO:0016020 SII_RS00330 e340d568f87bfdad87b3e64dfede1f72 237 PRINTS PR00783 Major intrinsic protein family signature 166 188 1.3E-47 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 SII_RS00330 e340d568f87bfdad87b3e64dfede1f72 237 PRINTS PR00783 Major intrinsic protein family signature 213 233 1.3E-47 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 SII_RS00330 e340d568f87bfdad87b3e64dfede1f72 237 PRINTS PR00783 Major intrinsic protein family signature 44 68 1.3E-47 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 SII_RS00330 e340d568f87bfdad87b3e64dfede1f72 237 PRINTS PR00783 Major intrinsic protein family signature 136 154 1.3E-47 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 SII_RS00330 e340d568f87bfdad87b3e64dfede1f72 237 PRINTS PR00783 Major intrinsic protein family signature 2 21 1.3E-47 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 SII_RS00330 e340d568f87bfdad87b3e64dfede1f72 237 PRINTS PR00783 Major intrinsic protein family signature 81 100 1.3E-47 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 SII_RS00330 e340d568f87bfdad87b3e64dfede1f72 237 PANTHER PTHR19139 1 236 1.3E-87 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 SII_RS00330 e340d568f87bfdad87b3e64dfede1f72 237 TIGRFAM TIGR00861 MIP: MIP family channel proteins 6 230 1.2E-55 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 SII_RS00330 e340d568f87bfdad87b3e64dfede1f72 237 Pfam PF00230 Major intrinsic protein 3 230 8.3E-45 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 SII_RS00330 e340d568f87bfdad87b3e64dfede1f72 237 PANTHER PTHR19139:SF147 1 236 1.3E-87 T 22-04-2016 SII_RS00330 e340d568f87bfdad87b3e64dfede1f72 237 SUPERFAMILY SSF81338 2 234 3.79E-70 T 22-04-2016 IPR023271 Aquaporin-like SII_RS00330 e340d568f87bfdad87b3e64dfede1f72 237 Gene3D G3DSA:1.20.1080.10 2 234 8.0E-83 T 22-04-2016 IPR023271 Aquaporin-like SII_RS02575 e4675c727a718c0665d68301879d2b25 309 Pfam PF00753 Metallo-beta-lactamase superfamily 35 89 6.4E-9 T 22-04-2016 IPR001279 Metallo-beta-lactamase SII_RS02575 e4675c727a718c0665d68301879d2b25 309 TIGRFAM TIGR02651 RNase_Z: ribonuclease Z 3 308 4.3E-104 T 22-04-2016 IPR013471 Ribonuclease Z/BN GO:0016891|GO:0042779 SII_RS02575 e4675c727a718c0665d68301879d2b25 309 SUPERFAMILY SSF56281 1 309 6.5E-77 T 22-04-2016 IPR001279 Metallo-beta-lactamase SII_RS02575 e4675c727a718c0665d68301879d2b25 309 Hamap MF_01818 Ribonuclease BN [rbn]. 1 309 38.281 T 22-04-2016 IPR013471 Ribonuclease Z/BN GO:0016891|GO:0042779 SII_RS02575 e4675c727a718c0665d68301879d2b25 309 PANTHER PTHR12553 1 156 7.0E-79 T 22-04-2016 SII_RS02575 e4675c727a718c0665d68301879d2b25 309 PANTHER PTHR12553 187 309 7.0E-79 T 22-04-2016 SII_RS02575 e4675c727a718c0665d68301879d2b25 309 Gene3D G3DSA:3.60.15.10 3 309 3.4E-80 T 22-04-2016 IPR001279 Metallo-beta-lactamase SII_RS02575 e4675c727a718c0665d68301879d2b25 309 Pfam PF12706 Beta-lactamase superfamily domain 206 275 1.8E-6 T 22-04-2016 IPR001279 Metallo-beta-lactamase SII_RS08785 10c5a4bd59680714c84baa2ee87665b4 207 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 18 204 6.5E-78 T 22-04-2016 IPR013005 50S ribosomal protein uL4 SII_RS08785 10c5a4bd59680714c84baa2ee87665b4 207 SUPERFAMILY SSF52166 1 206 5.63E-78 T 22-04-2016 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 SII_RS08785 10c5a4bd59680714c84baa2ee87665b4 207 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 9 207 36.184 T 22-04-2016 IPR013005 50S ribosomal protein uL4 SII_RS08785 10c5a4bd59680714c84baa2ee87665b4 207 Gene3D G3DSA:3.40.1370.10 58 207 1.7E-60 T 22-04-2016 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 SII_RS08785 10c5a4bd59680714c84baa2ee87665b4 207 Pfam PF00573 Ribosomal protein L4/L1 family 18 204 1.4E-65 T 22-04-2016 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 SII_RS08785 10c5a4bd59680714c84baa2ee87665b4 207 PANTHER PTHR10746 1 206 1.9E-90 T 22-04-2016 IPR013005 50S ribosomal protein uL4 SII_RS02040 7358f1dd1f03c0864f21b7a71fb5701d 323 Gene3D G3DSA:3.40.50.1980 172 320 4.2E-40 T 22-04-2016 SII_RS02040 7358f1dd1f03c0864f21b7a71fb5701d 323 SUPERFAMILY SSF53807 37 307 2.28E-59 T 22-04-2016 SII_RS02040 7358f1dd1f03c0864f21b7a71fb5701d 323 Pfam PF01497 Periplasmic binding protein 61 298 1.0E-31 T 22-04-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 SII_RS02040 7358f1dd1f03c0864f21b7a71fb5701d 323 PANTHER PTHR30532 1 320 1.3E-115 T 22-04-2016 SII_RS02040 7358f1dd1f03c0864f21b7a71fb5701d 323 Gene3D G3DSA:3.40.50.1980 42 167 1.1E-32 T 22-04-2016 SII_RS02040 7358f1dd1f03c0864f21b7a71fb5701d 323 PANTHER PTHR30532:SF4 1 320 1.3E-115 T 22-04-2016 SII_RS06680 65e787a8604164c4f564aceda642112f 210 SMART SM00421 142 199 2.6E-26 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SII_RS06680 65e787a8604164c4f564aceda642112f 210 SMART SM00448 1 114 9.5E-27 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SII_RS06680 65e787a8604164c4f564aceda642112f 210 SUPERFAMILY SSF52172 1 127 1.21E-31 T 22-04-2016 IPR011006 CheY-like superfamily SII_RS06680 65e787a8604164c4f564aceda642112f 210 SUPERFAMILY SSF46894 132 206 1.12E-23 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SII_RS06680 65e787a8604164c4f564aceda642112f 210 Gene3D G3DSA:1.10.10.10 123 207 1.4E-32 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SII_RS06680 65e787a8604164c4f564aceda642112f 210 Gene3D G3DSA:3.40.50.2300 1 122 7.5E-33 T 22-04-2016 SII_RS06680 65e787a8604164c4f564aceda642112f 210 PANTHER PTHR26402:SF151 1 201 5.6E-80 T 22-04-2016 SII_RS06680 65e787a8604164c4f564aceda642112f 210 ProSitePatterns PS00622 LuxR-type HTH domain signature. 159 186 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SII_RS06680 65e787a8604164c4f564aceda642112f 210 PANTHER PTHR26402 1 201 5.6E-80 T 22-04-2016 SII_RS06680 65e787a8604164c4f564aceda642112f 210 Pfam PF00196 Bacterial regulatory proteins, luxR family 144 199 2.4E-21 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SII_RS06680 65e787a8604164c4f564aceda642112f 210 Pfam PF00072 Response regulator receiver domain 3 114 1.2E-23 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SII_RS06680 65e787a8604164c4f564aceda642112f 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 159 175 2.4E-14 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SII_RS06680 65e787a8604164c4f564aceda642112f 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 145 159 2.4E-14 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SII_RS06680 65e787a8604164c4f564aceda642112f 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 175 187 2.4E-14 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SII_RS01930 74404c124f3175fbf455eb3f80f75671 99 Pfam PF08860 Domain of unknown function (DUF1827) 1 97 6.2E-36 T 22-04-2016 IPR014959 Protein of unknown function DUF1827 SII_RS01930 74404c124f3175fbf455eb3f80f75671 99 Gene3D G3DSA:3.40.1720.10 1 98 2.7E-43 T 22-04-2016 SII_RS04080 7c5f2721b7daee009adb897418733cee 193 SUPERFAMILY SSF53271 1 187 1.04E-43 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like SII_RS04080 7c5f2721b7daee009adb897418733cee 193 Hamap MF_01184 Xanthine phosphoribosyltransferase [xpt]. 1 189 40.134 T 22-04-2016 IPR010079 Xanthine phosphoribosyltransferase GO:0016763|GO:0043101|GO:0046110 KEGG: 00230+2.4.2.22|UniPathway: UPA00602 SII_RS04080 7c5f2721b7daee009adb897418733cee 193 Gene3D G3DSA:3.40.50.2020 1 190 1.1E-62 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like SII_RS04080 7c5f2721b7daee009adb897418733cee 193 PANTHER PTHR11776 1 188 4.5E-78 T 22-04-2016 SII_RS04080 7c5f2721b7daee009adb897418733cee 193 TIGRFAM TIGR01744 XPRTase: xanthine phosphoribosyltransferase 1 190 7.7E-79 T 22-04-2016 IPR010079 Xanthine phosphoribosyltransferase GO:0016763|GO:0043101|GO:0046110 KEGG: 00230+2.4.2.22|UniPathway: UPA00602 SII_RS04080 7c5f2721b7daee009adb897418733cee 193 Pfam PF00156 Phosphoribosyl transferase domain 33 181 3.2E-7 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 SII_RS04080 7c5f2721b7daee009adb897418733cee 193 PANTHER PTHR11776:SF1 1 188 4.5E-78 T 22-04-2016 SII_RS09435 3421a50921b36cb065839e63f3dc4273 279 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SII_RS09435 3421a50921b36cb065839e63f3dc4273 279 TIGRFAM TIGR04521 ECF_ATPase_2: energy-coupling factor transporter ATPase 3 277 7.4E-120 T 22-04-2016 IPR030946 Energy-coupling factor transporter ATP-binding protein EcfA2 SII_RS09435 3421a50921b36cb065839e63f3dc4273 279 PANTHER PTHR24220:SF66 4 244 1.1E-97 T 22-04-2016 SII_RS09435 3421a50921b36cb065839e63f3dc4273 279 SMART SM00382 32 222 1.2E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain SII_RS09435 3421a50921b36cb065839e63f3dc4273 279 SUPERFAMILY SSF52540 1 235 8.7E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS09435 3421a50921b36cb065839e63f3dc4273 279 Pfam PF00005 ABC transporter 25 174 2.9E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SII_RS09435 3421a50921b36cb065839e63f3dc4273 279 PANTHER PTHR24220 4 244 1.1E-97 T 22-04-2016 SII_RS09435 3421a50921b36cb065839e63f3dc4273 279 Gene3D G3DSA:3.40.50.300 3 235 8.0E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS03040 f9c6a3e4f36c35d4b7733d690627fcee 128 ProSitePatterns PS00934 Glyoxalase I signature 1. 7 28 - T 22-04-2016 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|UniPathway: UPA00619 SII_RS03040 f9c6a3e4f36c35d4b7733d690627fcee 128 Gene3D G3DSA:3.10.180.10 4 126 1.8E-33 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SII_RS03040 f9c6a3e4f36c35d4b7733d690627fcee 128 PANTHER PTHR10374 1 127 1.3E-38 T 22-04-2016 SII_RS03040 f9c6a3e4f36c35d4b7733d690627fcee 128 PANTHER PTHR10374:SF8 1 127 1.3E-38 T 22-04-2016 SII_RS03040 f9c6a3e4f36c35d4b7733d690627fcee 128 SUPERFAMILY SSF54593 1 124 4.16E-30 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SII_RS03040 f9c6a3e4f36c35d4b7733d690627fcee 128 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 122 1.7E-18 T 22-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain SII_RS05780 5bd5c488bc7157b697a252b8c7ab5e4d 227 Gene3D G3DSA:3.40.50.150 8 227 5.2E-59 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SII_RS05780 5bd5c488bc7157b697a252b8c7ab5e4d 227 PANTHER PTHR10509 13 227 5.7E-65 T 22-04-2016 SII_RS05780 5bd5c488bc7157b697a252b8c7ab5e4d 227 Pfam PF01596 O-methyltransferase 36 226 1.3E-28 T 22-04-2016 IPR002935 O-methyltransferase, family 3 GO:0008171 SII_RS05780 5bd5c488bc7157b697a252b8c7ab5e4d 227 SUPERFAMILY SSF53335 2 224 2.15E-46 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SII_RS05780 5bd5c488bc7157b697a252b8c7ab5e4d 227 PANTHER PTHR10509:SF14 13 227 5.7E-65 T 22-04-2016 SII_RS01790 c018c91aba72aacf37886fc722f78e64 160 Gene3D G3DSA:3.10.50.30 78 157 1.7E-26 T 22-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 SII_RS01790 c018c91aba72aacf37886fc722f78e64 160 Gene3D G3DSA:1.10.287.180 4 77 2.1E-30 T 22-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 SII_RS01790 c018c91aba72aacf37886fc722f78e64 160 PIRSF PIRSF006092 1 160 9.8E-48 T 22-04-2016 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 SII_RS01790 c018c91aba72aacf37886fc722f78e64 160 SUPERFAMILY SSF54534 83 157 9.16E-19 T 22-04-2016 SII_RS01790 c018c91aba72aacf37886fc722f78e64 160 SUPERFAMILY SSF46557 4 79 1.44E-25 T 22-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 SII_RS01790 c018c91aba72aacf37886fc722f78e64 160 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 19 50 - T 22-04-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 SII_RS01790 c018c91aba72aacf37886fc722f78e64 160 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 84 157 1.4E-25 T 22-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 SII_RS01790 c018c91aba72aacf37886fc722f78e64 160 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 122 138 - T 22-04-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 SII_RS01790 c018c91aba72aacf37886fc722f78e64 160 PANTHER PTHR30437 1 157 6.5E-60 T 22-04-2016 SII_RS01790 c018c91aba72aacf37886fc722f78e64 160 Hamap MF_00105 Transcription elongation factor GreA [greA]. 4 157 31.651 T 22-04-2016 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 SII_RS01790 c018c91aba72aacf37886fc722f78e64 160 Pfam PF03449 Transcription elongation factor, N-terminal 7 76 1.1E-27 T 22-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 SII_RS01790 c018c91aba72aacf37886fc722f78e64 160 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 7 157 4.7E-55 T 22-04-2016 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 SII_RS01080 c412675bc09953a3b2528582ea379f5d 151 PANTHER PTHR22769:SF30 1 150 1.1E-43 T 22-04-2016 SII_RS01080 c412675bc09953a3b2528582ea379f5d 151 Pfam PF00293 NUDIX domain 13 127 4.7E-18 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 SII_RS01080 c412675bc09953a3b2528582ea379f5d 151 Gene3D G3DSA:3.90.79.10 11 148 5.0E-30 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SII_RS01080 c412675bc09953a3b2528582ea379f5d 151 SUPERFAMILY SSF55811 12 138 1.33E-25 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SII_RS01080 c412675bc09953a3b2528582ea379f5d 151 ProSitePatterns PS00893 Nudix box signature. 39 60 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 SII_RS01080 c412675bc09953a3b2528582ea379f5d 151 PANTHER PTHR22769 1 150 1.1E-43 T 22-04-2016 SII_RS01080 c412675bc09953a3b2528582ea379f5d 151 PRINTS PR00502 NUDIX hydrolase family signature 34 48 7.5E-6 T 22-04-2016 IPR020476 NUDIX hydrolase SII_RS01080 c412675bc09953a3b2528582ea379f5d 151 PRINTS PR00502 NUDIX hydrolase family signature 48 63 7.5E-6 T 22-04-2016 IPR020476 NUDIX hydrolase SII_RS07675 880da7f24ac00697d91760caa8319aea 239 SUPERFAMILY SSF51569 8 234 1.95E-46 T 22-04-2016 SII_RS07675 880da7f24ac00697d91760caa8319aea 239 PANTHER PTHR10683 5 237 3.2E-88 T 22-04-2016 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 SII_RS07675 880da7f24ac00697d91760caa8319aea 239 Gene3D G3DSA:3.20.20.70 8 211 1.3E-34 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SII_RS07675 880da7f24ac00697d91760caa8319aea 239 Pfam PF00923 Transaldolase 10 213 1.2E-33 T 22-04-2016 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 SII_RS07675 880da7f24ac00697d91760caa8319aea 239 TIGRFAM TIGR02134 transald_staph: transaldolase 3 236 8.2E-114 T 22-04-2016 IPR011861 Transaldolase, Staphylococcus-type SII_RS07675 880da7f24ac00697d91760caa8319aea 239 PANTHER PTHR10683:SF13 5 237 3.2E-88 T 22-04-2016 SII_RS06860 9d5028f41f8f517e12256b4fa6b72a75 388 PANTHER PTHR22926:SF3 1 372 6.8E-86 T 22-04-2016 SII_RS06860 9d5028f41f8f517e12256b4fa6b72a75 388 PANTHER PTHR22926 1 372 6.8E-86 T 22-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 SII_RS06860 9d5028f41f8f517e12256b4fa6b72a75 388 Pfam PF00953 Glycosyl transferase family 4 91 248 4.2E-39 T 22-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 SII_RS01665 b13400e7b8fa18ae9bbce80a633ee62a 250 Gene3D G3DSA:3.40.50.720 2 233 6.4E-63 T 22-04-2016 IPR016040 NAD(P)-binding domain SII_RS01665 b13400e7b8fa18ae9bbce80a633ee62a 250 PANTHER PTHR24322:SF392 5 132 2.7E-74 T 22-04-2016 SII_RS01665 b13400e7b8fa18ae9bbce80a633ee62a 250 PANTHER PTHR24322:SF392 148 180 2.7E-74 T 22-04-2016 SII_RS01665 b13400e7b8fa18ae9bbce80a633ee62a 250 Pfam PF00106 short chain dehydrogenase 2 188 1.6E-55 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SII_RS01665 b13400e7b8fa18ae9bbce80a633ee62a 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 169 186 7.1E-24 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SII_RS01665 b13400e7b8fa18ae9bbce80a633ee62a 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 203 223 7.1E-24 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SII_RS01665 b13400e7b8fa18ae9bbce80a633ee62a 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 148 167 7.1E-24 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SII_RS01665 b13400e7b8fa18ae9bbce80a633ee62a 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 74 85 7.1E-24 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SII_RS01665 b13400e7b8fa18ae9bbce80a633ee62a 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 2 19 7.1E-24 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SII_RS01665 b13400e7b8fa18ae9bbce80a633ee62a 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 122 138 7.1E-24 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SII_RS01665 b13400e7b8fa18ae9bbce80a633ee62a 250 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 135 163 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 SII_RS01665 b13400e7b8fa18ae9bbce80a633ee62a 250 SUPERFAMILY SSF51735 2 229 3.36E-60 T 22-04-2016 IPR016040 NAD(P)-binding domain SII_RS01665 b13400e7b8fa18ae9bbce80a633ee62a 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 148 167 5.8E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SII_RS01665 b13400e7b8fa18ae9bbce80a633ee62a 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 74 85 5.8E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SII_RS01665 b13400e7b8fa18ae9bbce80a633ee62a 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 128 136 5.8E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SII_RS01665 b13400e7b8fa18ae9bbce80a633ee62a 250 PANTHER PTHR24322 5 132 2.7E-74 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SII_RS01665 b13400e7b8fa18ae9bbce80a633ee62a 250 PANTHER PTHR24322 148 180 2.7E-74 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SII_RS06135 93f961ee2be82eb14ebebe7d6955798b 142 PANTHER PTHR23091 1 140 1.5E-16 T 22-04-2016 SII_RS06135 93f961ee2be82eb14ebebe7d6955798b 142 Pfam PF13508 Acetyltransferase (GNAT) domain 44 128 1.3E-12 T 22-04-2016 IPR000182 GNAT domain GO:0008080 SII_RS06135 93f961ee2be82eb14ebebe7d6955798b 142 Gene3D G3DSA:3.40.630.30 2 139 1.9E-24 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SII_RS06135 93f961ee2be82eb14ebebe7d6955798b 142 SUPERFAMILY SSF55729 1 140 2.66E-24 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SII_RS02515 37248fff248df916d68b27205d4c2fa4 255 PIRSF PIRSF000161 1 255 3.0E-71 T 22-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 SII_RS02515 37248fff248df916d68b27205d4c2fa4 255 Gene3D G3DSA:3.30.360.10 129 224 2.0E-37 T 22-04-2016 SII_RS02515 37248fff248df916d68b27205d4c2fa4 255 Gene3D G3DSA:3.40.50.720 3 128 1.5E-15 T 22-04-2016 IPR016040 NAD(P)-binding domain SII_RS02515 37248fff248df916d68b27205d4c2fa4 255 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 121 255 8.3E-34 T 22-04-2016 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 SII_RS02515 37248fff248df916d68b27205d4c2fa4 255 SUPERFAMILY SSF51735 3 145 8.75E-37 T 22-04-2016 IPR016040 NAD(P)-binding domain SII_RS02515 37248fff248df916d68b27205d4c2fa4 255 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 3 255 28.467 T 22-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 SII_RS02515 37248fff248df916d68b27205d4c2fa4 255 PANTHER PTHR20836 1 255 2.1E-90 T 22-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 SII_RS02515 37248fff248df916d68b27205d4c2fa4 255 SUPERFAMILY SSF55347 119 227 6.76E-41 T 22-04-2016 SII_RS02515 37248fff248df916d68b27205d4c2fa4 255 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 140 157 - T 22-04-2016 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 SII_RS02515 37248fff248df916d68b27205d4c2fa4 255 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 3 118 7.2E-30 T 22-04-2016 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 SII_RS02515 37248fff248df916d68b27205d4c2fa4 255 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 3 255 1.9E-75 T 22-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 SII_RS04480 7e8efb7cf441e117926db7c369d90736 1059 SUPERFAMILY SSF52335 929 1050 7.46E-28 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain SII_RS04480 7e8efb7cf441e117926db7c369d90736 1059 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1058 13.08 T 22-04-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SII_RS04480 7e8efb7cf441e117926db7c369d90736 1059 Gene3D G3DSA:3.30.1490.20 679 737 4.0E-28 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 SII_RS04480 7e8efb7cf441e117926db7c369d90736 1059 PANTHER PTHR11405:SF5 1 1051 0.0 T 22-04-2016 SII_RS04480 7e8efb7cf441e117926db7c369d90736 1059 SUPERFAMILY SSF52440 1 127 4.17E-50 T 22-04-2016 IPR016185 Pre-ATP-grasp domain SII_RS04480 7e8efb7cf441e117926db7c369d90736 1059 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 666 867 1.8E-36 T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 SII_RS04480 7e8efb7cf441e117926db7c369d90736 1059 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 333 2.6E-77 T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 SII_RS04480 7e8efb7cf441e117926db7c369d90736 1059 SMART SM01096 420 540 1.4E-65 T 22-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SII_RS04480 7e8efb7cf441e117926db7c369d90736 1059 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 702 716 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 SII_RS04480 7e8efb7cf441e117926db7c369d90736 1059 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 164 178 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 SII_RS04480 7e8efb7cf441e117926db7c369d90736 1059 Hamap MF_01210_A Carbamoyl-phosphate synthase large chain [carB]. 5 1058 13.184 T 22-04-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SII_RS04480 7e8efb7cf441e117926db7c369d90736 1059 SMART SM01209 674 837 0.0042 T 22-04-2016 SII_RS04480 7e8efb7cf441e117926db7c369d90736 1059 Gene3D G3DSA:1.10.1030.10 399 531 2.6E-48 T 22-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SII_RS04480 7e8efb7cf441e117926db7c369d90736 1059 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 830 837 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 SII_RS04480 7e8efb7cf441e117926db7c369d90736 1059 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 296 303 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 SII_RS04480 7e8efb7cf441e117926db7c369d90736 1059 SUPERFAMILY SSF48108 395 547 1.44E-49 T 22-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SII_RS04480 7e8efb7cf441e117926db7c369d90736 1059 Gene3D G3DSA:3.40.50.1380 931 1052 1.2E-30 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain SII_RS04480 7e8efb7cf441e117926db7c369d90736 1059 Gene3D G3DSA:3.30.1490.20 142 199 6.9E-25 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 SII_RS04480 7e8efb7cf441e117926db7c369d90736 1059 PANTHER PTHR11405 1 1051 0.0 T 22-04-2016 SII_RS04480 7e8efb7cf441e117926db7c369d90736 1059 SMART SM00851 949 1037 4.6E-24 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain SII_RS04480 7e8efb7cf441e117926db7c369d90736 1059 SUPERFAMILY SSF56059 666 927 4.24E-102 T 22-04-2016 SII_RS04480 7e8efb7cf441e117926db7c369d90736 1059 SUPERFAMILY SSF56059 128 399 2.3E-106 T 22-04-2016 SII_RS04480 7e8efb7cf441e117926db7c369d90736 1059 Gene3D G3DSA:3.40.50.20 532 655 2.4E-58 T 22-04-2016 IPR016185 Pre-ATP-grasp domain SII_RS04480 7e8efb7cf441e117926db7c369d90736 1059 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1048 0.0 T 22-04-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SII_RS04480 7e8efb7cf441e117926db7c369d90736 1059 Gene3D G3DSA:3.40.50.20 3 108 2.9E-44 T 22-04-2016 IPR016185 Pre-ATP-grasp domain SII_RS04480 7e8efb7cf441e117926db7c369d90736 1059 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 378 396 2.2E-62 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SII_RS04480 7e8efb7cf441e117926db7c369d90736 1059 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 2.2E-62 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SII_RS04480 7e8efb7cf441e117926db7c369d90736 1059 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 296 325 2.2E-62 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SII_RS04480 7e8efb7cf441e117926db7c369d90736 1059 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 2.2E-62 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SII_RS04480 7e8efb7cf441e117926db7c369d90736 1059 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 2.2E-62 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SII_RS04480 7e8efb7cf441e117926db7c369d90736 1059 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 2.2E-62 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SII_RS04480 7e8efb7cf441e117926db7c369d90736 1059 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 2.2E-62 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SII_RS04480 7e8efb7cf441e117926db7c369d90736 1059 Pfam PF02142 MGS-like domain 950 1037 1.6E-19 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain SII_RS04480 7e8efb7cf441e117926db7c369d90736 1059 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 423 540 4.1E-39 T 22-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SII_RS04480 7e8efb7cf441e117926db7c369d90736 1059 SUPERFAMILY SSF52440 550 668 7.91E-46 T 22-04-2016 IPR016185 Pre-ATP-grasp domain SII_RS04480 7e8efb7cf441e117926db7c369d90736 1059 Gene3D G3DSA:3.30.470.20 200 398 1.7E-73 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 SII_RS04480 7e8efb7cf441e117926db7c369d90736 1059 Gene3D G3DSA:3.30.470.20 738 927 1.6E-73 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 SII_RS02520 7c4060462bd175ef07e3fa92634948e6 399 PANTHER PTHR13734:SF5 15 229 1.9E-64 T 22-04-2016 SII_RS02520 7c4060462bd175ef07e3fa92634948e6 399 PANTHER PTHR13734 15 229 1.9E-64 T 22-04-2016 SII_RS02520 7c4060462bd175ef07e3fa92634948e6 399 Hamap MF_01263 CCA-adding enzyme [cca]. 7 399 41.74 T 22-04-2016 IPR023068 CCA-adding enzyme, firmicutes GO:0001680|GO:0004810|GO:0016437 SII_RS02520 7c4060462bd175ef07e3fa92634948e6 399 Gene3D G3DSA:3.30.460.10 11 147 2.6E-46 T 22-04-2016 SII_RS02520 7c4060462bd175ef07e3fa92634948e6 399 Pfam PF13735 tRNA nucleotidyltransferase domain 2 putative 249 395 4.7E-44 T 22-04-2016 IPR032810 CCA-adding enzyme, C-terminal SII_RS02520 7c4060462bd175ef07e3fa92634948e6 399 SUPERFAMILY SSF81891 145 397 1.57E-51 T 22-04-2016 SII_RS02520 7c4060462bd175ef07e3fa92634948e6 399 SUPERFAMILY SSF81301 10 143 3.81E-41 T 22-04-2016 SII_RS02520 7c4060462bd175ef07e3fa92634948e6 399 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 174 232 4.0E-15 T 22-04-2016 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain SII_RS02520 7c4060462bd175ef07e3fa92634948e6 399 Pfam PF01743 Poly A polymerase head domain 27 147 1.6E-36 T 22-04-2016 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 SII_RS02520 7c4060462bd175ef07e3fa92634948e6 399 Gene3D G3DSA:1.10.3090.10 148 366 8.8E-48 T 22-04-2016 SII_RS01695 295197220eb4ba12c061caab7298924e 408 Gene3D G3DSA:1.20.1250.20 6 201 8.6E-7 T 22-04-2016 SII_RS01695 295197220eb4ba12c061caab7298924e 408 SUPERFAMILY SSF103473 6 405 9.02E-19 T 22-04-2016 IPR020846 Major facilitator superfamily domain SII_RS03075 b724e744eadb5d13df8f4165899e1672 271 SUPERFAMILY SSF56784 1 269 2.25E-71 T 22-04-2016 IPR023214 HAD-like domain SII_RS03075 b724e744eadb5d13df8f4165899e1672 271 ProSitePatterns PS01228 Hypothetical cof family signature 1. 4 15 - T 22-04-2016 IPR000150 Cof protein GO:0016787 SII_RS03075 b724e744eadb5d13df8f4165899e1672 271 ProSitePatterns PS01229 Hypothetical cof family signature 2. 218 240 - T 22-04-2016 SII_RS03075 b724e744eadb5d13df8f4165899e1672 271 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 4 264 4.9E-63 T 22-04-2016 IPR000150 Cof protein GO:0016787 SII_RS03075 b724e744eadb5d13df8f4165899e1672 271 Gene3D G3DSA:3.30.1240.10 87 183 9.0E-17 T 22-04-2016 SII_RS03075 b724e744eadb5d13df8f4165899e1672 271 PANTHER PTHR10000 1 270 1.0E-95 T 22-04-2016 SII_RS03075 b724e744eadb5d13df8f4165899e1672 271 Pfam PF08282 haloacid dehalogenase-like hydrolase 5 264 9.6E-67 T 22-04-2016 IPR023214 HAD-like domain SII_RS03075 b724e744eadb5d13df8f4165899e1672 271 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 4 237 1.0E-27 T 22-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 SII_RS03075 b724e744eadb5d13df8f4165899e1672 271 PANTHER PTHR10000:SF16 1 270 1.0E-95 T 22-04-2016 SII_RS03075 b724e744eadb5d13df8f4165899e1672 271 Gene3D G3DSA:3.40.50.1000 184 270 5.4E-59 T 22-04-2016 IPR023214 HAD-like domain SII_RS03075 b724e744eadb5d13df8f4165899e1672 271 Gene3D G3DSA:3.40.50.1000 1 75 5.4E-59 T 22-04-2016 IPR023214 HAD-like domain SII_RS09085 d5d9e661fe8f210a1ea567dad744bcce 420 Pfam PF13416 Bacterial extracellular solute-binding protein 55 355 7.7E-46 T 22-04-2016 SII_RS09085 d5d9e661fe8f210a1ea567dad744bcce 420 PANTHER PTHR30061 1 417 1.7E-122 T 22-04-2016 SII_RS09085 d5d9e661fe8f210a1ea567dad744bcce 420 ProSitePatterns PS01037 Bacterial extracellular solute-binding proteins, family 1 signature. 140 157 - T 22-04-2016 IPR006061 Solute-binding family 1, conserved site GO:0005215|GO:0006810 SII_RS09085 d5d9e661fe8f210a1ea567dad744bcce 420 Gene3D G3DSA:3.40.190.10 147 343 2.9E-53 T 22-04-2016 SII_RS09085 d5d9e661fe8f210a1ea567dad744bcce 420 PANTHER PTHR30061:SF21 1 417 1.7E-122 T 22-04-2016 SII_RS09085 d5d9e661fe8f210a1ea567dad744bcce 420 SUPERFAMILY SSF53850 42 409 5.67E-80 T 22-04-2016 SII_RS09085 d5d9e661fe8f210a1ea567dad744bcce 420 Gene3D G3DSA:3.40.190.10 39 97 5.4E-4 T 22-04-2016 SII_RS05955 d5ba3317bc5b43f04eec590362cff37c 453 TIGRFAM TIGR01000 bacteriocin_acc: bacteriocin secretion accessory protein 1 451 1.2E-128 T 22-04-2016 IPR005696 Mesentericin y105 secretion protein GO:0005215|GO:0006810 SII_RS05955 d5ba3317bc5b43f04eec590362cff37c 453 PANTHER PTHR32347:SF12 261 450 5.8E-13 T 22-04-2016 SII_RS05955 d5ba3317bc5b43f04eec590362cff37c 453 PANTHER PTHR32347 261 450 5.8E-13 T 22-04-2016 SII_RS05955 d5ba3317bc5b43f04eec590362cff37c 453 Pfam PF13437 HlyD family secretion protein 314 426 9.5E-14 T 22-04-2016 SII_RS06405 cc1feea33cb8441c1d09c0dd903639ff 670 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 583 595 - T 22-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SII_RS06405 cc1feea33cb8441c1d09c0dd903639ff 670 PANTHER PTHR30175:SF4 1 616 0.0 T 22-04-2016 SII_RS06405 cc1feea33cb8441c1d09c0dd903639ff 670 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 520 644 6.7E-50 T 22-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SII_RS06405 cc1feea33cb8441c1d09c0dd903639ff 670 Pfam PF02378 Phosphotransferase system, EIIC 111 428 1.5E-37 T 22-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 SII_RS06405 cc1feea33cb8441c1d09c0dd903639ff 670 Gene3D G3DSA:3.30.1360.60 3 82 3.9E-24 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 SII_RS06405 cc1feea33cb8441c1d09c0dd903639ff 670 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 29 109 3.3E-13 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 SII_RS06405 cc1feea33cb8441c1d09c0dd903639ff 670 SUPERFAMILY SSF51261 515 650 2.09E-52 T 22-04-2016 IPR011055 Duplicated hybrid motif SII_RS06405 cc1feea33cb8441c1d09c0dd903639ff 670 PANTHER PTHR30175 1 616 0.0 T 22-04-2016 SII_RS06405 cc1feea33cb8441c1d09c0dd903639ff 670 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 521 641 1.4E-41 T 22-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SII_RS06405 cc1feea33cb8441c1d09c0dd903639ff 670 Gene3D G3DSA:2.70.70.10 515 666 4.8E-58 T 22-04-2016 SII_RS06405 cc1feea33cb8441c1d09c0dd903639ff 670 TIGRFAM TIGR01992 PTS-IIBC-Tre: PTS system, trehalose-specific IIBC component 5 486 6.1E-218 T 22-04-2016 IPR011296 Phosphotransferase system, trehalose-specific IIBC component GO:0015574|GO:0015771|GO:0016021 SII_RS06405 cc1feea33cb8441c1d09c0dd903639ff 670 Pfam PF00367 phosphotransferase system, EIIB 10 42 6.8E-13 T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 SII_RS06405 cc1feea33cb8441c1d09c0dd903639ff 670 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 20 37 - T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 SII_RS06405 cc1feea33cb8441c1d09c0dd903639ff 670 SUPERFAMILY SSF55604 8 80 4.58E-19 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 SII_RS03555 26a75ba7975ccca005a79203ebc70b5c 316 PANTHER PTHR34216:SF3 94 313 1.6E-55 T 22-04-2016 SII_RS03555 26a75ba7975ccca005a79203ebc70b5c 316 PANTHER PTHR34216 94 313 1.6E-55 T 22-04-2016 SII_RS03555 26a75ba7975ccca005a79203ebc70b5c 316 Pfam PF01522 Polysaccharide deacetylase 152 277 2.6E-31 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 SII_RS03555 26a75ba7975ccca005a79203ebc70b5c 316 Gene3D G3DSA:3.20.20.370 124 289 1.3E-32 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 SII_RS03555 26a75ba7975ccca005a79203ebc70b5c 316 SUPERFAMILY SSF88713 113 298 5.44E-41 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 SII_RS04560 46215270de32bbb8ed882aef857b01b0 183 PIRSF PIRSF008502 1 181 6.8E-31 T 22-04-2016 IPR012545 Protein of unknown function DUF1697 SII_RS04560 46215270de32bbb8ed882aef857b01b0 183 Gene3D G3DSA:3.30.70.1260 88 178 7.0E-38 T 22-04-2016 SII_RS04560 46215270de32bbb8ed882aef857b01b0 183 SUPERFAMILY SSF160379 1 178 1.83E-49 T 22-04-2016 SII_RS04560 46215270de32bbb8ed882aef857b01b0 183 PANTHER PTHR36439 1 181 2.5E-32 T 22-04-2016 SII_RS04560 46215270de32bbb8ed882aef857b01b0 183 Gene3D G3DSA:3.30.70.1280 1 87 4.5E-28 T 22-04-2016 SII_RS04560 46215270de32bbb8ed882aef857b01b0 183 PANTHER PTHR36439:SF1 1 181 2.5E-32 T 22-04-2016 SII_RS04560 46215270de32bbb8ed882aef857b01b0 183 Pfam PF08002 Protein of unknown function (DUF1697) 1 136 1.7E-32 T 22-04-2016 IPR012545 Protein of unknown function DUF1697 SII_RS04830 215a378c3de07c2aaa3d7b140b2422ad 334 ProSitePatterns PS00356 LacI-type HTH domain signature. 9 27 - T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SII_RS04830 215a378c3de07c2aaa3d7b140b2422ad 334 PANTHER PTHR30146 6 334 1.5E-128 T 22-04-2016 SII_RS04830 215a378c3de07c2aaa3d7b140b2422ad 334 TIGRFAM TIGR01481 ccpA: catabolite control protein A 5 333 5.1E-169 T 22-04-2016 IPR006377 Catabolite control protein A GO:0006355 SII_RS04830 215a378c3de07c2aaa3d7b140b2422ad 334 Gene3D G3DSA:3.40.50.2300 59 176 5.9E-45 T 22-04-2016 SII_RS04830 215a378c3de07c2aaa3d7b140b2422ad 334 Pfam PF00356 Bacterial regulatory proteins, lacI family 8 53 7.1E-22 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SII_RS04830 215a378c3de07c2aaa3d7b140b2422ad 334 SUPERFAMILY SSF47413 6 64 1.31E-19 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SII_RS04830 215a378c3de07c2aaa3d7b140b2422ad 334 Gene3D G3DSA:1.10.260.40 7 58 1.3E-27 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SII_RS04830 215a378c3de07c2aaa3d7b140b2422ad 334 Gene3D G3DSA:3.40.50.2300 177 313 3.2E-36 T 22-04-2016 SII_RS04830 215a378c3de07c2aaa3d7b140b2422ad 334 PANTHER PTHR30146:SF4 6 334 1.5E-128 T 22-04-2016 SII_RS04830 215a378c3de07c2aaa3d7b140b2422ad 334 SUPERFAMILY SSF53822 66 333 1.18E-71 T 22-04-2016 IPR028082 Periplasmic binding protein-like I SII_RS04830 215a378c3de07c2aaa3d7b140b2422ad 334 Pfam PF13377 Periplasmic binding protein-like domain 176 332 5.2E-26 T 22-04-2016 SII_RS04830 215a378c3de07c2aaa3d7b140b2422ad 334 SMART SM00354 6 76 2.2E-37 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SII_RS04830 215a378c3de07c2aaa3d7b140b2422ad 334 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 8 18 8.1E-7 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SII_RS04830 215a378c3de07c2aaa3d7b140b2422ad 334 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 18 28 8.1E-7 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SII_RS08535 acf20d96a1168e7bd7f64a42f635be6d 344 Pfam PF02016 LD-carboxypeptidase 5 330 3.2E-62 T 22-04-2016 IPR003507 Peptidase family S66 SII_RS08535 acf20d96a1168e7bd7f64a42f635be6d 344 PANTHER PTHR30237 4 219 8.4E-146 T 22-04-2016 SII_RS08535 acf20d96a1168e7bd7f64a42f635be6d 344 PANTHER PTHR30237 236 342 8.4E-146 T 22-04-2016 SII_RS08535 acf20d96a1168e7bd7f64a42f635be6d 344 Gene3D G3DSA:3.40.50.10740 4 168 2.2E-41 T 22-04-2016 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal domain SII_RS08535 acf20d96a1168e7bd7f64a42f635be6d 344 PIRSF PIRSF028757 1 343 3.4E-52 T 22-04-2016 IPR003507 Peptidase family S66 SII_RS08535 acf20d96a1168e7bd7f64a42f635be6d 344 SUPERFAMILY SSF52317 4 165 1.83E-36 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like SII_RS08535 acf20d96a1168e7bd7f64a42f635be6d 344 Gene3D G3DSA:3.50.30.60 201 338 8.6E-28 T 22-04-2016 IPR027461 LD-carboxypeptidase A, C-terminal domain SII_RS08535 acf20d96a1168e7bd7f64a42f635be6d 344 SUPERFAMILY SSF141986 199 336 2.88E-18 T 22-04-2016 IPR027461 LD-carboxypeptidase A, C-terminal domain SII_RS08535 acf20d96a1168e7bd7f64a42f635be6d 344 PANTHER PTHR30237:SF4 4 219 8.4E-146 T 22-04-2016 SII_RS08535 acf20d96a1168e7bd7f64a42f635be6d 344 PANTHER PTHR30237:SF4 236 342 8.4E-146 T 22-04-2016 SII_RS07600 83a0bb83a1604ca8ee9d18907424ae83 659 SUPERFAMILY SSF53850 28 588 1.1E-76 T 22-04-2016 SII_RS07600 83a0bb83a1604ca8ee9d18907424ae83 659 PANTHER PTHR30290:SF10 405 629 1.2E-131 T 22-04-2016 SII_RS07600 83a0bb83a1604ca8ee9d18907424ae83 659 PANTHER PTHR30290:SF10 1 312 1.2E-131 T 22-04-2016 SII_RS07600 83a0bb83a1604ca8ee9d18907424ae83 659 PANTHER PTHR30290:SF10 331 389 1.2E-131 T 22-04-2016 SII_RS07600 83a0bb83a1604ca8ee9d18907424ae83 659 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 81 103 - T 22-04-2016 IPR023765 Solute-binding protein family 5, conserved site SII_RS07600 83a0bb83a1604ca8ee9d18907424ae83 659 Gene3D G3DSA:3.10.105.10 342 584 5.0E-31 T 22-04-2016 SII_RS07600 83a0bb83a1604ca8ee9d18907424ae83 659 Gene3D G3DSA:3.40.190.10 212 341 6.4E-17 T 22-04-2016 SII_RS07600 83a0bb83a1604ca8ee9d18907424ae83 659 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 76 522 8.2E-48 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain SII_RS07600 83a0bb83a1604ca8ee9d18907424ae83 659 PIRSF PIRSF002741 1 602 4.3E-47 T 22-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 SII_RS07600 83a0bb83a1604ca8ee9d18907424ae83 659 Gene3D G3DSA:3.90.76.10 42 211 7.7E-40 T 22-04-2016 SII_RS07600 83a0bb83a1604ca8ee9d18907424ae83 659 PANTHER PTHR30290 405 629 1.2E-131 T 22-04-2016 SII_RS07600 83a0bb83a1604ca8ee9d18907424ae83 659 PANTHER PTHR30290 1 312 1.2E-131 T 22-04-2016 SII_RS07600 83a0bb83a1604ca8ee9d18907424ae83 659 PANTHER PTHR30290 331 389 1.2E-131 T 22-04-2016 SII_RS07535 d935f51a36b2536227707072caf4dfcc 588 SUPERFAMILY SSF52540 332 578 6.85E-81 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS07535 d935f51a36b2536227707072caf4dfcc 588 PANTHER PTHR24221 12 587 6.6E-151 T 22-04-2016 SII_RS07535 d935f51a36b2536227707072caf4dfcc 588 ProSitePatterns PS00211 ABC transporters family signature. 480 494 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SII_RS07535 d935f51a36b2536227707072caf4dfcc 588 Gene3D G3DSA:1.20.1560.10 8 318 2.3E-47 T 22-04-2016 SII_RS07535 d935f51a36b2536227707072caf4dfcc 588 Pfam PF00005 ABC transporter 357 506 2.5E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SII_RS07535 d935f51a36b2536227707072caf4dfcc 588 Gene3D G3DSA:3.40.50.300 339 572 2.6E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS07535 d935f51a36b2536227707072caf4dfcc 588 SUPERFAMILY SSF90123 5 318 3.66E-53 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SII_RS07535 d935f51a36b2536227707072caf4dfcc 588 SMART SM00382 365 560 1.7E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain SII_RS07535 d935f51a36b2536227707072caf4dfcc 588 Pfam PF00664 ABC transporter transmembrane region 16 291 2.4E-25 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SII_RS02900 33ab335e0e3c7919572fba2a97dd68da 173 ProSitePatterns PS00893 Nudix box signature. 76 97 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 SII_RS02900 33ab335e0e3c7919572fba2a97dd68da 173 Gene3D G3DSA:3.90.79.10 7 169 4.8E-28 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SII_RS02900 33ab335e0e3c7919572fba2a97dd68da 173 PANTHER PTHR22769:SF35 28 173 1.1E-12 T 22-04-2016 SII_RS02900 33ab335e0e3c7919572fba2a97dd68da 173 PANTHER PTHR22769 28 173 1.1E-12 T 22-04-2016 SII_RS02900 33ab335e0e3c7919572fba2a97dd68da 173 SUPERFAMILY SSF55811 12 169 2.92E-25 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SII_RS02900 33ab335e0e3c7919572fba2a97dd68da 173 Pfam PF00293 NUDIX domain 38 148 1.0E-12 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 SII_RS07835 028965249538637463db425fde1fbbd1 352 Pfam PF04087 Domain of unknown function (DUF389) 51 187 1.3E-36 T 22-04-2016 IPR005240 Protein of unknown function DUF389 SII_RS07835 028965249538637463db425fde1fbbd1 352 PANTHER PTHR20992 8 302 5.4E-53 T 22-04-2016 SII_RS03050 f5dd9889d5cb382655ab2db687653d55 361 Gene3D G3DSA:3.40.50.300 5 200 1.1E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS03050 f5dd9889d5cb382655ab2db687653d55 361 SMART SM00490 243 324 2.2E-22 T 22-04-2016 IPR001650 Helicase, C-terminal SII_RS03050 f5dd9889d5cb382655ab2db687653d55 361 Pfam PF00271 Helicase conserved C-terminal domain 216 324 5.8E-22 T 22-04-2016 IPR001650 Helicase, C-terminal SII_RS03050 f5dd9889d5cb382655ab2db687653d55 361 SMART SM00487 18 208 1.0E-42 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain SII_RS03050 f5dd9889d5cb382655ab2db687653d55 361 Gene3D G3DSA:3.40.50.300 201 355 6.7E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS03050 f5dd9889d5cb382655ab2db687653d55 361 PANTHER PTHR24031 14 351 6.3E-97 T 22-04-2016 SII_RS03050 f5dd9889d5cb382655ab2db687653d55 361 SUPERFAMILY SSF52540 67 338 7.13E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS03050 f5dd9889d5cb382655ab2db687653d55 361 Pfam PF00270 DEAD/DEAH box helicase 23 188 4.5E-40 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 SII_RS04760 056ecfad47c9df73d7ec1085fdd1d398 869 SUPERFAMILY SSF56059 1 376 8.12E-129 T 22-04-2016 SII_RS04760 056ecfad47c9df73d7ec1085fdd1d398 869 Gene3D G3DSA:1.10.189.10 339 400 1.8E-28 T 22-04-2016 SII_RS04760 056ecfad47c9df73d7ec1085fdd1d398 869 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 301 354 1.9E-10 T 22-04-2016 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 SII_RS04760 056ecfad47c9df73d7ec1085fdd1d398 869 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 17 288 8.5E-43 T 22-04-2016 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 SII_RS04760 056ecfad47c9df73d7ec1085fdd1d398 869 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 517 866 3.6E-83 T 22-04-2016 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 SII_RS04760 056ecfad47c9df73d7ec1085fdd1d398 869 Gene3D G3DSA:3.20.20.60 530 868 1.6E-131 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 SII_RS04760 056ecfad47c9df73d7ec1085fdd1d398 869 Gene3D G3DSA:3.30.1490.20 197 240 6.7E-57 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 SII_RS04760 056ecfad47c9df73d7ec1085fdd1d398 869 Gene3D G3DSA:3.30.1490.20 3 111 6.7E-57 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 SII_RS04760 056ecfad47c9df73d7ec1085fdd1d398 869 Gene3D G3DSA:3.30.470.20 241 338 4.3E-37 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 SII_RS04760 056ecfad47c9df73d7ec1085fdd1d398 869 Gene3D G3DSA:3.50.30.10 401 503 9.7E-41 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 SII_RS04760 056ecfad47c9df73d7ec1085fdd1d398 869 TIGRFAM TIGR01828 pyru_phos_dikin: pyruvate, phosphate dikinase 3 868 0.0 T 22-04-2016 IPR010121 Pyruvate, phosphate dikinase GO:0006090|GO:0050242 KEGG: 00620+2.7.9.1|KEGG: 00710+2.7.9.1|KEGG: 00720+2.7.9.1|MetaCyc: PWY-241|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117 SII_RS04760 056ecfad47c9df73d7ec1085fdd1d398 869 SUPERFAMILY SSF51621 518 868 5.83E-118 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 SII_RS04760 056ecfad47c9df73d7ec1085fdd1d398 869 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 758 776 - T 22-04-2016 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 SII_RS04760 056ecfad47c9df73d7ec1085fdd1d398 869 PANTHER PTHR22931 1 868 0.0 T 22-04-2016 SII_RS04760 056ecfad47c9df73d7ec1085fdd1d398 869 SUPERFAMILY SSF52009 387 508 7.72E-37 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 SII_RS04760 056ecfad47c9df73d7ec1085fdd1d398 869 PIRSF PIRSF000853 1 869 0.0 T 22-04-2016 IPR010121 Pyruvate, phosphate dikinase GO:0006090|GO:0050242 KEGG: 00620+2.7.9.1|KEGG: 00710+2.7.9.1|KEGG: 00720+2.7.9.1|MetaCyc: PWY-241|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117 SII_RS04760 056ecfad47c9df73d7ec1085fdd1d398 869 Pfam PF00391 PEP-utilising enzyme, mobile domain 419 500 3.6E-27 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 SII_RS04760 056ecfad47c9df73d7ec1085fdd1d398 869 Gene3D G3DSA:1.20.80.30 112 195 1.8E-23 T 22-04-2016 SII_RS04760 056ecfad47c9df73d7ec1085fdd1d398 869 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 447 458 - T 22-04-2016 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 SII_RS04760 056ecfad47c9df73d7ec1085fdd1d398 869 PANTHER PTHR22931:SF9 1 868 0.0 T 22-04-2016 IPR010121 Pyruvate, phosphate dikinase GO:0006090|GO:0050242 KEGG: 00620+2.7.9.1|KEGG: 00710+2.7.9.1|KEGG: 00720+2.7.9.1|MetaCyc: PWY-241|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117 SII_RS03645 f3628ff9b19897de6f204f4f1afa4902 370 SMART SM01003 4 136 3.1E-74 T 22-04-2016 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal SII_RS03645 f3628ff9b19897de6f204f4f1afa4902 370 PANTHER PTHR10160 1 370 1.4E-194 T 22-04-2016 SII_RS03645 f3628ff9b19897de6f204f4f1afa4902 370 TIGRFAM TIGR00518 alaDH: alanine dehydrogenase 1 367 1.1E-165 T 22-04-2016 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|UniPathway: UPA00527 SII_RS03645 f3628ff9b19897de6f204f4f1afa4902 370 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 136 1.0E-44 T 22-04-2016 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal SII_RS03645 f3628ff9b19897de6f204f4f1afa4902 370 SMART SM01002 148 297 1.6E-84 T 22-04-2016 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain SII_RS03645 f3628ff9b19897de6f204f4f1afa4902 370 Gene3D G3DSA:3.40.50.1770 196 357 4.0E-30 T 22-04-2016 SII_RS03645 f3628ff9b19897de6f204f4f1afa4902 370 ProSitePatterns PS00836 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 1. 4 30 - T 22-04-2016 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 GO:0016491|GO:0055114 SII_RS03645 f3628ff9b19897de6f204f4f1afa4902 370 SUPERFAMILY SSF51735 136 303 1.7E-48 T 22-04-2016 IPR016040 NAD(P)-binding domain SII_RS03645 f3628ff9b19897de6f204f4f1afa4902 370 Gene3D G3DSA:3.40.50.1770 1 176 3.5E-59 T 22-04-2016 SII_RS03645 f3628ff9b19897de6f204f4f1afa4902 370 PIRSF PIRSF000183 1 370 4.2E-177 T 22-04-2016 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|UniPathway: UPA00527 SII_RS03645 f3628ff9b19897de6f204f4f1afa4902 370 Gene3D G3DSA:3.40.50.720 177 195 5.0E-5 T 22-04-2016 IPR016040 NAD(P)-binding domain SII_RS03645 f3628ff9b19897de6f204f4f1afa4902 370 ProSitePatterns PS00837 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 2. 172 197 - T 22-04-2016 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 GO:0016491|GO:0055114 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|UniPathway: UPA00527 SII_RS03645 f3628ff9b19897de6f204f4f1afa4902 370 SUPERFAMILY SSF52283 305 360 2.3E-64 T 22-04-2016 SII_RS03645 f3628ff9b19897de6f204f4f1afa4902 370 SUPERFAMILY SSF52283 1 136 2.3E-64 T 22-04-2016 SII_RS03645 f3628ff9b19897de6f204f4f1afa4902 370 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 140 352 5.9E-84 T 22-04-2016 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain SII_RS03800 af104188749fe006c3218adf594aa497 235 PANTHER PTHR39209:SF2 1 235 1.5E-46 T 22-04-2016 SII_RS03800 af104188749fe006c3218adf594aa497 235 SUPERFAMILY SSF56037 53 228 4.71E-36 T 22-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 SII_RS03800 af104188749fe006c3218adf594aa497 235 PANTHER PTHR39209 1 235 1.5E-46 T 22-04-2016 SII_RS03800 af104188749fe006c3218adf594aa497 235 Pfam PF03483 B3/4 domain 70 204 7.6E-24 T 22-04-2016 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 SII_RS03800 af104188749fe006c3218adf594aa497 235 Gene3D G3DSA:3.50.40.10 55 202 8.8E-17 T 22-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 SII_RS03800 af104188749fe006c3218adf594aa497 235 SMART SM00873 65 218 4.1E-15 T 22-04-2016 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 SII_RS01750 ee93b1eca78fc3caeaec025e177d6c36 237 SUPERFAMILY SSF55469 1 227 1.83E-58 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 SII_RS01750 ee93b1eca78fc3caeaec025e177d6c36 237 PANTHER PTHR23026 1 188 4.5E-69 T 22-04-2016 SII_RS01750 ee93b1eca78fc3caeaec025e177d6c36 237 Pfam PF00881 Nitroreductase family 9 162 8.1E-21 T 22-04-2016 IPR029479 Nitroreductase SII_RS01750 ee93b1eca78fc3caeaec025e177d6c36 237 Gene3D G3DSA:3.40.109.10 1 235 3.4E-64 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 SII_RS01750 ee93b1eca78fc3caeaec025e177d6c36 237 PIRSF PIRSF005426 1 235 2.8E-71 T 22-04-2016 IPR016446 Flavin oxidoreductase Frp family GO:0016491|GO:0055114 SII_RS01750 ee93b1eca78fc3caeaec025e177d6c36 237 PANTHER PTHR23026:SF98 1 188 4.5E-69 T 22-04-2016 SII_RS03640 ce8f0c2c7f489a0b95e4a64fbece73e0 106 Gene3D G3DSA:3.30.1460.30 4 61 1.7E-8 T 22-04-2016 IPR007076 TfoX, N-terminal SII_RS03640 ce8f0c2c7f489a0b95e4a64fbece73e0 106 Pfam PF04993 TfoX N-terminal domain 13 73 5.9E-9 T 22-04-2016 IPR007076 TfoX, N-terminal SII_RS03640 ce8f0c2c7f489a0b95e4a64fbece73e0 106 SUPERFAMILY SSF159894 6 97 3.66E-16 T 22-04-2016 SII_RS05855 2a36afc8fccb467c6330789392630ba0 446 PANTHER PTHR11014 240 271 2.9E-59 T 22-04-2016 SII_RS05855 2a36afc8fccb467c6330789392630ba0 446 PANTHER PTHR11014 291 446 2.9E-59 T 22-04-2016 SII_RS05855 2a36afc8fccb467c6330789392630ba0 446 PANTHER PTHR11014 1 188 2.9E-59 T 22-04-2016 SII_RS05855 2a36afc8fccb467c6330789392630ba0 446 PANTHER PTHR11014:SF16 240 271 2.9E-59 T 22-04-2016 SII_RS05855 2a36afc8fccb467c6330789392630ba0 446 PANTHER PTHR11014:SF16 291 446 2.9E-59 T 22-04-2016 SII_RS05855 2a36afc8fccb467c6330789392630ba0 446 PANTHER PTHR11014:SF16 1 188 2.9E-59 T 22-04-2016 SII_RS05855 2a36afc8fccb467c6330789392630ba0 446 TIGRFAM TIGR01887 dipeptidaselike: putative dipeptidase 12 438 3.4E-141 T 22-04-2016 IPR010964 Peptidase M20A, peptidase V-related GO:0008270|GO:0016805 KEGG: 00480+3.4.13.- SII_RS05855 2a36afc8fccb467c6330789392630ba0 446 Pfam PF01546 Peptidase family M20/M25/M40 82 439 1.9E-30 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 SII_RS05855 2a36afc8fccb467c6330789392630ba0 446 SUPERFAMILY SSF55031 184 356 6.38E-33 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain SII_RS05855 2a36afc8fccb467c6330789392630ba0 446 Gene3D G3DSA:3.40.630.10 8 184 2.9E-63 T 22-04-2016 SII_RS05855 2a36afc8fccb467c6330789392630ba0 446 Gene3D G3DSA:3.40.630.10 359 442 2.9E-63 T 22-04-2016 SII_RS05855 2a36afc8fccb467c6330789392630ba0 446 SUPERFAMILY SSF53187 360 442 4.1E-62 T 22-04-2016 SII_RS05855 2a36afc8fccb467c6330789392630ba0 446 SUPERFAMILY SSF53187 7 184 4.1E-62 T 22-04-2016 SII_RS05855 2a36afc8fccb467c6330789392630ba0 446 Gene3D G3DSA:3.30.70.360 200 262 5.0E-7 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain SII_RS05855 2a36afc8fccb467c6330789392630ba0 446 Gene3D G3DSA:3.30.70.360 263 352 2.0E-14 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain SII_RS02710 3362e5631e3dd00d710502ab9fd44185 254 Gene3D G3DSA:3.30.540.10 2 155 1.1E-35 T 22-04-2016 SII_RS02710 3362e5631e3dd00d710502ab9fd44185 254 Pfam PF00459 Inositol monophosphatase family 6 237 2.6E-39 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 SII_RS02710 3362e5631e3dd00d710502ab9fd44185 254 SUPERFAMILY SSF56655 2 251 1.16E-53 T 22-04-2016 SII_RS02710 3362e5631e3dd00d710502ab9fd44185 254 PANTHER PTHR20854:SF4 1 241 4.5E-49 T 22-04-2016 SII_RS02710 3362e5631e3dd00d710502ab9fd44185 254 Gene3D G3DSA:3.40.190.80 160 240 3.6E-13 T 22-04-2016 SII_RS02710 3362e5631e3dd00d710502ab9fd44185 254 PANTHER PTHR20854 1 241 4.5E-49 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 SII_RS02710 3362e5631e3dd00d710502ab9fd44185 254 PRINTS PR00377 Inositol monophosphatase superfamily signature 80 96 2.1E-20 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 SII_RS02710 3362e5631e3dd00d710502ab9fd44185 254 PRINTS PR00377 Inositol monophosphatase superfamily signature 59 75 2.1E-20 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 SII_RS02710 3362e5631e3dd00d710502ab9fd44185 254 PRINTS PR00377 Inositol monophosphatase superfamily signature 37 57 2.1E-20 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 SII_RS02710 3362e5631e3dd00d710502ab9fd44185 254 PRINTS PR00377 Inositol monophosphatase superfamily signature 201 225 2.1E-20 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 SII_RS02710 3362e5631e3dd00d710502ab9fd44185 254 PRINTS PR00377 Inositol monophosphatase superfamily signature 171 192 2.1E-20 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 SII_RS01325 f94d8c5aa591ead062e292b3f06749f4 74 SUPERFAMILY SSF54593 16 73 2.67E-7 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SII_RS01325 f94d8c5aa591ead062e292b3f06749f4 74 PANTHER PTHR36113:SF1 1 74 3.2E-21 T 22-04-2016 SII_RS01325 f94d8c5aa591ead062e292b3f06749f4 74 PANTHER PTHR36113 1 74 3.2E-21 T 22-04-2016 SII_RS01325 f94d8c5aa591ead062e292b3f06749f4 74 Gene3D G3DSA:3.10.180.10 11 73 2.5E-13 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SII_RS02075 f83df30e01384a818e3433d5aa96c02f 230 Hamap MF_01039 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [gpmA]. 1 228 42.764 T 22-04-2016 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484|UniPathway: UPA00109 SII_RS02075 f83df30e01384a818e3433d5aa96c02f 230 PANTHER PTHR11931 1 229 1.3E-139 T 22-04-2016 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484|UniPathway: UPA00109 SII_RS02075 f83df30e01384a818e3433d5aa96c02f 230 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 128 220 1.0E-5 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 SII_RS02075 f83df30e01384a818e3433d5aa96c02f 230 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 123 8.8E-28 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 SII_RS02075 f83df30e01384a818e3433d5aa96c02f 230 Gene3D G3DSA:3.40.50.1240 1 227 5.8E-91 T 22-04-2016 IPR029033 Histidine phosphatase superfamily SII_RS02075 f83df30e01384a818e3433d5aa96c02f 230 SMART SM00855 3 189 5.3E-23 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 SII_RS02075 f83df30e01384a818e3433d5aa96c02f 230 SUPERFAMILY SSF53254 1 229 2.17E-71 T 22-04-2016 IPR029033 Histidine phosphatase superfamily SII_RS02075 f83df30e01384a818e3433d5aa96c02f 230 TIGRFAM TIGR01258 pgm_1: phosphoglycerate mutase 1 family 3 229 9.9E-106 T 22-04-2016 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484|UniPathway: UPA00109 SII_RS04285 7f42320411bbbc04760ca395470d2a1c 281 TIGRFAM TIGR00762 DegV: EDD domain protein, DegV family 4 277 5.7E-51 T 22-04-2016 IPR003797 DegV SII_RS04285 7f42320411bbbc04760ca395470d2a1c 281 Pfam PF02645 Uncharacterised protein, DegV family COG1307 2 272 1.9E-63 T 22-04-2016 IPR003797 DegV SII_RS04285 7f42320411bbbc04760ca395470d2a1c 281 Gene3D G3DSA:3.30.1180.10 155 279 3.7E-35 T 22-04-2016 SII_RS04285 7f42320411bbbc04760ca395470d2a1c 281 SUPERFAMILY SSF82549 1 280 3.66E-64 T 22-04-2016 SII_RS04285 7f42320411bbbc04760ca395470d2a1c 281 PANTHER PTHR33434:SF3 1 274 7.6E-77 T 22-04-2016 SII_RS04285 7f42320411bbbc04760ca395470d2a1c 281 Gene3D G3DSA:3.40.50.10440 67 153 1.9E-28 T 22-04-2016 SII_RS04285 7f42320411bbbc04760ca395470d2a1c 281 Gene3D G3DSA:3.40.50.10440 1 29 1.9E-28 T 22-04-2016 SII_RS04285 7f42320411bbbc04760ca395470d2a1c 281 PANTHER PTHR33434 1 274 7.6E-77 T 22-04-2016 SII_RS04285 7f42320411bbbc04760ca395470d2a1c 281 Gene3D G3DSA:2.20.28.50 30 66 5.2E-14 T 22-04-2016 SII_RS04375 c3e901aa4a790dc5b53a09d4ae2da1ef 152 Pfam PF08876 Domain of unknown function (DUF1836) 7 106 1.5E-33 T 22-04-2016 IPR014975 Protein of unknown function DUF1836 SII_RS04375 c3e901aa4a790dc5b53a09d4ae2da1ef 152 PANTHER PTHR40056 5 151 1.4E-23 T 22-04-2016 SII_RS04375 c3e901aa4a790dc5b53a09d4ae2da1ef 152 PANTHER PTHR40056:SF1 5 151 1.4E-23 T 22-04-2016 SII_RS05310 62428e3c0ef60cd4d55d2f561cbd9c3a 398 PRINTS PR00315 GTP-binding elongation factor signature 14 27 2.0E-25 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SII_RS05310 62428e3c0ef60cd4d55d2f561cbd9c3a 398 PRINTS PR00315 GTP-binding elongation factor signature 61 69 2.0E-25 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SII_RS05310 62428e3c0ef60cd4d55d2f561cbd9c3a 398 PRINTS PR00315 GTP-binding elongation factor signature 81 91 2.0E-25 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SII_RS05310 62428e3c0ef60cd4d55d2f561cbd9c3a 398 PRINTS PR00315 GTP-binding elongation factor signature 97 108 2.0E-25 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SII_RS05310 62428e3c0ef60cd4d55d2f561cbd9c3a 398 PRINTS PR00315 GTP-binding elongation factor signature 134 143 2.0E-25 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SII_RS05310 62428e3c0ef60cd4d55d2f561cbd9c3a 398 SUPERFAMILY SSF50447 208 305 2.91E-29 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain SII_RS05310 62428e3c0ef60cd4d55d2f561cbd9c3a 398 Gene3D G3DSA:2.40.30.10 212 302 5.7E-38 T 22-04-2016 SII_RS05310 62428e3c0ef60cd4d55d2f561cbd9c3a 398 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 396 6.1E-223 T 22-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 SII_RS05310 62428e3c0ef60cd4d55d2f561cbd9c3a 398 PANTHER PTHR23115 1 397 2.1E-244 T 22-04-2016 SII_RS05310 62428e3c0ef60cd4d55d2f561cbd9c3a 398 Pfam PF03143 Elongation factor Tu C-terminal domain 302 396 3.9E-32 T 22-04-2016 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal SII_RS05310 62428e3c0ef60cd4d55d2f561cbd9c3a 398 Pfam PF03144 Elongation factor Tu domain 2 228 297 1.9E-16 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 SII_RS05310 62428e3c0ef60cd4d55d2f561cbd9c3a 398 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 54 69 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site SII_RS05310 62428e3c0ef60cd4d55d2f561cbd9c3a 398 PANTHER PTHR23115:SF112 1 397 2.1E-244 T 22-04-2016 SII_RS05310 62428e3c0ef60cd4d55d2f561cbd9c3a 398 Gene3D G3DSA:3.40.50.300 3 211 9.9E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS05310 62428e3c0ef60cd4d55d2f561cbd9c3a 398 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 398 59.538 T 22-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 SII_RS05310 62428e3c0ef60cd4d55d2f561cbd9c3a 398 Pfam PF00009 Elongation factor Tu GTP binding domain 10 204 6.7E-59 T 22-04-2016 SII_RS05310 62428e3c0ef60cd4d55d2f561cbd9c3a 398 Gene3D G3DSA:2.40.30.10 305 396 1.8E-45 T 22-04-2016 SII_RS05310 62428e3c0ef60cd4d55d2f561cbd9c3a 398 SUPERFAMILY SSF50465 306 397 1.24E-35 T 22-04-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal SII_RS05310 62428e3c0ef60cd4d55d2f561cbd9c3a 398 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 149 3.7E-13 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 SII_RS05310 62428e3c0ef60cd4d55d2f561cbd9c3a 398 SUPERFAMILY SSF52540 6 222 2.03E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS07380 402e0cfdfd9c2d89c320120f9161d0e8 175 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 29 139 3.7E-20 T 22-04-2016 IPR006549 HAD-superfamily hydrolase,subfamily IIIA SII_RS07380 402e0cfdfd9c2d89c320120f9161d0e8 175 TIGRFAM TIGR01668 YqeG_hyp_ppase: HAD phosphatase, family IIIA 6 169 2.9E-42 T 22-04-2016 IPR010021 HAD-superfamily phosphatase, YqeG-like SII_RS07380 402e0cfdfd9c2d89c320120f9161d0e8 175 PANTHER PTHR19288 7 159 3.0E-37 T 22-04-2016 SII_RS07380 402e0cfdfd9c2d89c320120f9161d0e8 175 Gene3D G3DSA:3.40.50.1000 13 158 2.4E-30 T 22-04-2016 IPR023214 HAD-like domain SII_RS07380 402e0cfdfd9c2d89c320120f9161d0e8 175 PANTHER PTHR19288:SF25 7 159 3.0E-37 T 22-04-2016 SII_RS07380 402e0cfdfd9c2d89c320120f9161d0e8 175 Pfam PF13419 Haloacid dehalogenase-like hydrolase 13 137 1.7E-15 T 22-04-2016 IPR023214 HAD-like domain SII_RS07380 402e0cfdfd9c2d89c320120f9161d0e8 175 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 59 131 6.3E-7 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SII_RS07380 402e0cfdfd9c2d89c320120f9161d0e8 175 SUPERFAMILY SSF56784 5 148 2.1E-28 T 22-04-2016 IPR023214 HAD-like domain SII_RS08225 f453b78322d112935cc8eb33d1d25f5b 131 PANTHER PTHR10302 1 121 2.0E-33 T 22-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 SII_RS08225 f453b78322d112935cc8eb33d1d25f5b 131 Hamap MF_00984 Single-stranded DNA-binding protein. 2 106 30.542 T 22-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 SII_RS08225 f453b78322d112935cc8eb33d1d25f5b 131 SUPERFAMILY SSF50249 1 131 3.43E-39 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SII_RS08225 f453b78322d112935cc8eb33d1d25f5b 131 PIRSF PIRSF002070 1 121 3.4E-32 T 22-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 SII_RS08225 f453b78322d112935cc8eb33d1d25f5b 131 Gene3D G3DSA:2.40.50.140 1 116 2.1E-37 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SII_RS08225 f453b78322d112935cc8eb33d1d25f5b 131 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 1 115 2.6E-29 T 22-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 SII_RS08225 f453b78322d112935cc8eb33d1d25f5b 131 Pfam PF00436 Single-strand binding protein family 3 101 1.1E-28 T 22-04-2016 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 SII_RS07625 c3df32ca90753cf99090639ac15fa59f 427 SUPERFAMILY SSF54534 89 244 3.54E-36 T 22-04-2016 SII_RS07625 c3df32ca90753cf99090639ac15fa59f 427 SUPERFAMILY SSF109998 250 427 1.1E-38 T 22-04-2016 IPR027304 Trigger factor/SurA domain SII_RS07625 c3df32ca90753cf99090639ac15fa59f 427 Hamap MF_00303 Trigger factor [tig]. 1 427 22.331 T 22-04-2016 IPR005215 Trigger factor GO:0015031 SII_RS07625 c3df32ca90753cf99090639ac15fa59f 427 Gene3D G3DSA:1.10.3120.10 217 401 1.4E-57 T 22-04-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 SII_RS07625 c3df32ca90753cf99090639ac15fa59f 427 TIGRFAM TIGR00115 tig: trigger factor 13 420 3.6E-128 T 22-04-2016 IPR005215 Trigger factor GO:0015031 SII_RS07625 c3df32ca90753cf99090639ac15fa59f 427 SUPERFAMILY SSF102735 1 129 7.46E-35 T 22-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 SII_RS07625 c3df32ca90753cf99090639ac15fa59f 427 Pfam PF05697 Bacterial trigger factor protein (TF) 1 145 1.1E-39 T 22-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 SII_RS07625 c3df32ca90753cf99090639ac15fa59f 427 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 159 231 3.2E-14 T 22-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 SII_RS07625 c3df32ca90753cf99090639ac15fa59f 427 PANTHER PTHR30560:SF3 1 427 6.8E-123 T 22-04-2016 SII_RS07625 c3df32ca90753cf99090639ac15fa59f 427 Gene3D G3DSA:3.10.50.40 157 216 4.8E-11 T 22-04-2016 SII_RS07625 c3df32ca90753cf99090639ac15fa59f 427 PIRSF PIRSF003095 1 427 2.1E-123 T 22-04-2016 IPR005215 Trigger factor GO:0015031 SII_RS07625 c3df32ca90753cf99090639ac15fa59f 427 PANTHER PTHR30560 1 427 6.8E-123 T 22-04-2016 SII_RS07625 c3df32ca90753cf99090639ac15fa59f 427 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 264 421 3.9E-44 T 22-04-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 SII_RS07625 c3df32ca90753cf99090639ac15fa59f 427 Gene3D G3DSA:3.30.70.1050 1 119 2.1E-36 T 22-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 SII_RS07510 56a6d311c092261c01033fa5d80a8e05 241 SUPERFAMILY SSF46785 1 74 1.03E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SII_RS07510 56a6d311c092261c01033fa5d80a8e05 241 SMART SM00345 7 66 7.9E-16 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SII_RS07510 56a6d311c092261c01033fa5d80a8e05 241 Gene3D G3DSA:3.40.1410.10 63 230 1.3E-50 T 22-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain SII_RS07510 56a6d311c092261c01033fa5d80a8e05 241 Pfam PF00392 Bacterial regulatory proteins, gntR family 3 66 3.5E-18 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SII_RS07510 56a6d311c092261c01033fa5d80a8e05 241 SUPERFAMILY SSF64288 79 233 2.04E-44 T 22-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain SII_RS07510 56a6d311c092261c01033fa5d80a8e05 241 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 26 40 4.1E-9 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SII_RS07510 56a6d311c092261c01033fa5d80a8e05 241 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 40 56 4.1E-9 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SII_RS07510 56a6d311c092261c01033fa5d80a8e05 241 PANTHER PTHR11751 122 145 1.8E-36 T 22-04-2016 SII_RS07510 56a6d311c092261c01033fa5d80a8e05 241 PANTHER PTHR11751 1 69 1.8E-36 T 22-04-2016 SII_RS07510 56a6d311c092261c01033fa5d80a8e05 241 PANTHER PTHR11751:SF381 122 145 1.8E-36 T 22-04-2016 SII_RS07510 56a6d311c092261c01033fa5d80a8e05 241 PANTHER PTHR11751:SF381 1 69 1.8E-36 T 22-04-2016 SII_RS07510 56a6d311c092261c01033fa5d80a8e05 241 Pfam PF07702 UTRA domain 96 229 3.7E-36 T 22-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 SII_RS07510 56a6d311c092261c01033fa5d80a8e05 241 Gene3D G3DSA:1.10.10.10 1 62 5.1E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SII_RS07510 56a6d311c092261c01033fa5d80a8e05 241 SMART SM00866 93 232 3.4E-35 T 22-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 SII_RS02640 373f9770c8aa9e406e33dfb9a3c96865 399 SUPERFAMILY SSF160240 211 289 1.03E-18 T 22-04-2016 SII_RS02640 373f9770c8aa9e406e33dfb9a3c96865 399 Pfam PF01545 Cation efflux family 16 207 6.9E-48 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 SII_RS02640 373f9770c8aa9e406e33dfb9a3c96865 399 Gene3D G3DSA:1.20.1510.10 13 207 1.0E-42 T 22-04-2016 IPR027469 Cation efflux protein transmembrane domain SII_RS02640 373f9770c8aa9e406e33dfb9a3c96865 399 Gene3D G3DSA:3.30.70.1350 209 288 6.7E-25 T 22-04-2016 IPR027470 Cation efflux protein, cytoplasmic domain SII_RS02640 373f9770c8aa9e406e33dfb9a3c96865 399 SUPERFAMILY SSF161111 8 209 8.63E-49 T 22-04-2016 SII_RS02640 373f9770c8aa9e406e33dfb9a3c96865 399 PANTHER PTHR11562:SF18 11 298 8.6E-72 T 22-04-2016 SII_RS02640 373f9770c8aa9e406e33dfb9a3c96865 399 Pfam PF16916 Dimerisation domain of Zinc Transporter 212 288 6.6E-17 T 22-04-2016 IPR027470 Cation efflux protein, cytoplasmic domain SII_RS02640 373f9770c8aa9e406e33dfb9a3c96865 399 PANTHER PTHR11562 11 298 8.6E-72 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 SII_RS02640 373f9770c8aa9e406e33dfb9a3c96865 399 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 12 288 1.2E-58 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 SII_RS00345 d8a7034edd5fec80941f1bc515c53664 158 SUPERFAMILY SSF52728 1 157 1.2E-52 T 22-04-2016 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 SII_RS00345 d8a7034edd5fec80941f1bc515c53664 158 PANTHER PTHR33799:SF2 1 158 1.6E-90 T 22-04-2016 SII_RS00345 d8a7034edd5fec80941f1bc515c53664 158 Pfam PF03830 PTS system sorbose subfamily IIB component 4 149 4.0E-49 T 22-04-2016 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 SII_RS00345 d8a7034edd5fec80941f1bc515c53664 158 PANTHER PTHR33799 1 158 1.6E-90 T 22-04-2016 SII_RS00345 d8a7034edd5fec80941f1bc515c53664 158 Gene3D G3DSA:3.40.35.10 1 158 3.0E-56 T 22-04-2016 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 SII_RS04495 167fb2fd709db08345f85237e4d0864a 422 PANTHER PTHR11119:SF49 8 419 3.3E-148 T 22-04-2016 SII_RS04495 167fb2fd709db08345f85237e4d0864a 422 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 18 416 6.2E-121 T 22-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 SII_RS04495 167fb2fd709db08345f85237e4d0864a 422 Pfam PF00860 Permease family 21 393 6.6E-93 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 SII_RS04495 167fb2fd709db08345f85237e4d0864a 422 PANTHER PTHR11119 8 419 3.3E-148 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 SII_RS04495 167fb2fd709db08345f85237e4d0864a 422 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 340 360 - T 22-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 SII_RS07415 58e5d747ccd8a76ba15ce23e78c31c56 582 PRINTS PR01042 Aspartyl-tRNA synthetase signature 511 525 1.8E-24 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SII_RS07415 58e5d747ccd8a76ba15ce23e78c31c56 582 PRINTS PR01042 Aspartyl-tRNA synthetase signature 208 221 1.8E-24 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SII_RS07415 58e5d747ccd8a76ba15ce23e78c31c56 582 PRINTS PR01042 Aspartyl-tRNA synthetase signature 467 483 1.8E-24 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SII_RS07415 58e5d747ccd8a76ba15ce23e78c31c56 582 PRINTS PR01042 Aspartyl-tRNA synthetase signature 191 203 1.8E-24 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SII_RS07415 58e5d747ccd8a76ba15ce23e78c31c56 582 Hamap MF_00044 Aspartate--tRNA(Asp) ligase [aspS]. 1 556 32.603 T 22-04-2016 SII_RS07415 58e5d747ccd8a76ba15ce23e78c31c56 582 Pfam PF00152 tRNA synthetases class II (D, K and N) 119 550 2.6E-101 T 22-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SII_RS07415 58e5d747ccd8a76ba15ce23e78c31c56 582 SUPERFAMILY SSF55261 290 416 4.91E-23 T 22-04-2016 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 SII_RS07415 58e5d747ccd8a76ba15ce23e78c31c56 582 SUPERFAMILY SSF55681 114 293 1.05E-99 T 22-04-2016 SII_RS07415 58e5d747ccd8a76ba15ce23e78c31c56 582 SUPERFAMILY SSF55681 421 578 1.05E-99 T 22-04-2016 SII_RS07415 58e5d747ccd8a76ba15ce23e78c31c56 582 PANTHER PTHR22594 383 564 1.1E-216 T 22-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SII_RS07415 58e5d747ccd8a76ba15ce23e78c31c56 582 PANTHER PTHR22594 1 318 1.1E-216 T 22-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SII_RS07415 58e5d747ccd8a76ba15ce23e78c31c56 582 Gene3D G3DSA:2.40.50.140 5 105 1.1E-27 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SII_RS07415 58e5d747ccd8a76ba15ce23e78c31c56 582 Pfam PF02938 GAD domain 309 402 5.1E-13 T 22-04-2016 IPR029351 GAD domain SII_RS07415 58e5d747ccd8a76ba15ce23e78c31c56 582 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 1 575 2.5E-206 T 22-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 SII_RS07415 58e5d747ccd8a76ba15ce23e78c31c56 582 Pfam PF01336 OB-fold nucleic acid binding domain 21 101 3.9E-16 T 22-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 SII_RS07415 58e5d747ccd8a76ba15ce23e78c31c56 582 PANTHER PTHR22594:SF5 383 564 1.1E-216 T 22-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 SII_RS07415 58e5d747ccd8a76ba15ce23e78c31c56 582 PANTHER PTHR22594:SF5 1 318 1.1E-216 T 22-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 SII_RS07415 58e5d747ccd8a76ba15ce23e78c31c56 582 Gene3D G3DSA:3.30.1360.30 278 410 1.3E-33 T 22-04-2016 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 SII_RS07415 58e5d747ccd8a76ba15ce23e78c31c56 582 SUPERFAMILY SSF50249 1 104 2.36E-23 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SII_RS07415 58e5d747ccd8a76ba15ce23e78c31c56 582 Gene3D G3DSA:3.30.930.10 133 277 2.3E-107 T 22-04-2016 SII_RS07415 58e5d747ccd8a76ba15ce23e78c31c56 582 Gene3D G3DSA:3.30.930.10 411 578 2.3E-107 T 22-04-2016 SII_RS01815 56105efef595f08e9bcaf1db61d467d7 163 Pfam PF01966 HD domain 36 135 5.5E-5 T 22-04-2016 IPR006674 HD domain SII_RS01815 56105efef595f08e9bcaf1db61d467d7 163 SUPERFAMILY SSF109604 15 140 2.22E-20 T 22-04-2016 SII_RS01815 56105efef595f08e9bcaf1db61d467d7 163 TIGRFAM TIGR00277 HDIG: HDIG domain 35 109 2.4E-8 T 22-04-2016 IPR006675 HDIG domain SII_RS01815 56105efef595f08e9bcaf1db61d467d7 163 Gene3D G3DSA:1.10.3210.10 11 142 1.2E-26 T 22-04-2016 IPR006674 HD domain SII_RS05460 98dd14772a18658bcf8784418e057788 495 PANTHER PTHR22594 4 495 5.7E-264 T 22-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SII_RS05460 98dd14772a18658bcf8784418e057788 495 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 9 495 9.6E-208 T 22-04-2016 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6 SII_RS05460 98dd14772a18658bcf8784418e057788 495 SUPERFAMILY SSF55681 156 494 7.28E-118 T 22-04-2016 SII_RS05460 98dd14772a18658bcf8784418e057788 495 Pfam PF00152 tRNA synthetases class II (D, K and N) 157 494 1.1E-77 T 22-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SII_RS05460 98dd14772a18658bcf8784418e057788 495 Gene3D G3DSA:3.30.930.10 151 493 1.6E-119 T 22-04-2016 SII_RS05460 98dd14772a18658bcf8784418e057788 495 Pfam PF01336 OB-fold nucleic acid binding domain 64 138 1.2E-15 T 22-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 SII_RS05460 98dd14772a18658bcf8784418e057788 495 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 15 495 43.604 T 22-04-2016 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6 SII_RS05460 98dd14772a18658bcf8784418e057788 495 Gene3D G3DSA:2.40.50.140 10 149 2.2E-49 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SII_RS05460 98dd14772a18658bcf8784418e057788 495 PANTHER PTHR22594:SF4 4 495 5.7E-264 T 22-04-2016 SII_RS05460 98dd14772a18658bcf8784418e057788 495 PRINTS PR00982 Lysyl-tRNA synthetase signature 379 395 2.6E-39 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 SII_RS05460 98dd14772a18658bcf8784418e057788 495 PRINTS PR00982 Lysyl-tRNA synthetase signature 238 251 2.6E-39 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 SII_RS05460 98dd14772a18658bcf8784418e057788 495 PRINTS PR00982 Lysyl-tRNA synthetase signature 193 203 2.6E-39 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 SII_RS05460 98dd14772a18658bcf8784418e057788 495 PRINTS PR00982 Lysyl-tRNA synthetase signature 209 225 2.6E-39 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 SII_RS05460 98dd14772a18658bcf8784418e057788 495 PRINTS PR00982 Lysyl-tRNA synthetase signature 256 273 2.6E-39 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 SII_RS05460 98dd14772a18658bcf8784418e057788 495 SUPERFAMILY SSF50249 8 149 2.69E-43 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SII_RS01110 544e7ec1eb80ffd00f53fe5554ac614f 759 PANTHER PTHR11731 435 532 1.5E-51 T 22-04-2016 SII_RS01110 544e7ec1eb80ffd00f53fe5554ac614f 759 PANTHER PTHR11731 260 398 1.5E-51 T 22-04-2016 SII_RS01110 544e7ec1eb80ffd00f53fe5554ac614f 759 PANTHER PTHR11731 167 212 1.5E-51 T 22-04-2016 SII_RS01110 544e7ec1eb80ffd00f53fe5554ac614f 759 Gene3D G3DSA:3.40.50.1820 454 539 9.7E-51 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SII_RS01110 544e7ec1eb80ffd00f53fe5554ac614f 759 Gene3D G3DSA:3.40.50.1820 162 213 9.7E-51 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SII_RS01110 544e7ec1eb80ffd00f53fe5554ac614f 759 Gene3D G3DSA:3.40.50.1820 261 380 9.7E-51 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SII_RS01110 544e7ec1eb80ffd00f53fe5554ac614f 759 SUPERFAMILY SSF81761 1 145 5.23E-42 T 22-04-2016 IPR015251 X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal domain GO:0006508|GO:0008239 SII_RS01110 544e7ec1eb80ffd00f53fe5554ac614f 759 SMART SM00939 513 753 3.4E-54 T 22-04-2016 IPR013736 Xaa-Pro dipeptidyl-peptidase, C-terminal GO:0008239 SII_RS01110 544e7ec1eb80ffd00f53fe5554ac614f 759 SMART SM00940 1 143 1.7E-64 T 22-04-2016 IPR015251 X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal domain GO:0006508|GO:0008239 SII_RS01110 544e7ec1eb80ffd00f53fe5554ac614f 759 Pfam PF09168 X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal 1 143 3.2E-44 T 22-04-2016 IPR015251 X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal domain GO:0006508|GO:0008239 SII_RS01110 544e7ec1eb80ffd00f53fe5554ac614f 759 Gene3D G3DSA:2.60.120.260 540 637 2.1E-62 T 22-04-2016 IPR008979 Galactose-binding domain-like SII_RS01110 544e7ec1eb80ffd00f53fe5554ac614f 759 Gene3D G3DSA:2.60.120.260 676 755 2.1E-62 T 22-04-2016 IPR008979 Galactose-binding domain-like SII_RS01110 544e7ec1eb80ffd00f53fe5554ac614f 759 PANTHER PTHR11731:SF148 435 532 1.5E-51 T 22-04-2016 SII_RS01110 544e7ec1eb80ffd00f53fe5554ac614f 759 PANTHER PTHR11731:SF148 260 398 1.5E-51 T 22-04-2016 SII_RS01110 544e7ec1eb80ffd00f53fe5554ac614f 759 PANTHER PTHR11731:SF148 167 212 1.5E-51 T 22-04-2016 SII_RS01110 544e7ec1eb80ffd00f53fe5554ac614f 759 SUPERFAMILY SSF53474 148 548 2.02E-93 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SII_RS01110 544e7ec1eb80ffd00f53fe5554ac614f 759 Pfam PF02129 X-Pro dipeptidyl-peptidase (S15 family) 186 499 4.6E-76 T 22-04-2016 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain GO:0016787 SII_RS01110 544e7ec1eb80ffd00f53fe5554ac614f 759 PRINTS PR00923 Lactococcus X-Pro dipeptidyl-peptidase (S15) family signature 721 736 7.1E-38 T 22-04-2016 IPR008252 Peptidase S15, X-Pro dipeptidyl-peptidase GO:0004177|GO:0006508 SII_RS01110 544e7ec1eb80ffd00f53fe5554ac614f 759 PRINTS PR00923 Lactococcus X-Pro dipeptidyl-peptidase (S15) family signature 152 164 7.1E-38 T 22-04-2016 IPR008252 Peptidase S15, X-Pro dipeptidyl-peptidase GO:0004177|GO:0006508 SII_RS01110 544e7ec1eb80ffd00f53fe5554ac614f 759 PRINTS PR00923 Lactococcus X-Pro dipeptidyl-peptidase (S15) family signature 505 521 7.1E-38 T 22-04-2016 IPR008252 Peptidase S15, X-Pro dipeptidyl-peptidase GO:0004177|GO:0006508 SII_RS01110 544e7ec1eb80ffd00f53fe5554ac614f 759 PRINTS PR00923 Lactococcus X-Pro dipeptidyl-peptidase (S15) family signature 186 195 7.1E-38 T 22-04-2016 IPR008252 Peptidase S15, X-Pro dipeptidyl-peptidase GO:0004177|GO:0006508 SII_RS01110 544e7ec1eb80ffd00f53fe5554ac614f 759 PRINTS PR00923 Lactococcus X-Pro dipeptidyl-peptidase (S15) family signature 168 178 7.1E-38 T 22-04-2016 IPR008252 Peptidase S15, X-Pro dipeptidyl-peptidase GO:0004177|GO:0006508 SII_RS01110 544e7ec1eb80ffd00f53fe5554ac614f 759 PRINTS PR00923 Lactococcus X-Pro dipeptidyl-peptidase (S15) family signature 370 386 7.1E-38 T 22-04-2016 IPR008252 Peptidase S15, X-Pro dipeptidyl-peptidase GO:0004177|GO:0006508 SII_RS01110 544e7ec1eb80ffd00f53fe5554ac614f 759 PRINTS PR00923 Lactococcus X-Pro dipeptidyl-peptidase (S15) family signature 200 216 7.1E-38 T 22-04-2016 IPR008252 Peptidase S15, X-Pro dipeptidyl-peptidase GO:0004177|GO:0006508 SII_RS01110 544e7ec1eb80ffd00f53fe5554ac614f 759 SUPERFAMILY SSF49785 556 755 9.99E-70 T 22-04-2016 IPR008979 Galactose-binding domain-like SII_RS01110 544e7ec1eb80ffd00f53fe5554ac614f 759 Hamap MF_00698 Xaa-Pro dipeptidyl-peptidase [pepX]. 1 756 34.784 T 22-04-2016 IPR008252 Peptidase S15, X-Pro dipeptidyl-peptidase GO:0004177|GO:0006508 SII_RS01110 544e7ec1eb80ffd00f53fe5554ac614f 759 Pfam PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain 529 750 1.0E-30 T 22-04-2016 IPR013736 Xaa-Pro dipeptidyl-peptidase, C-terminal GO:0008239 SII_RS05275 e49efe85eb8561963ae2c51bbbfb8757 269 TIGRFAM TIGR01697 PNPH-PUNA-XAPA: inosine/guanosine/xanthosine phosphorylase family 25 266 1.5E-100 T 22-04-2016 IPR011268 Purine nucleoside phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|UniPathway: UPA00606 SII_RS05275 e49efe85eb8561963ae2c51bbbfb8757 269 PANTHER PTHR11904 1 269 4.7E-123 T 22-04-2016 IPR001369 PNP/MTAP phosphorylase SII_RS05275 e49efe85eb8561963ae2c51bbbfb8757 269 SUPERFAMILY SSF53167 2 269 9.88E-87 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 SII_RS05275 e49efe85eb8561963ae2c51bbbfb8757 269 PANTHER PTHR11904:SF9 1 269 4.7E-123 T 22-04-2016 IPR011268 Purine nucleoside phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|UniPathway: UPA00606 SII_RS05275 e49efe85eb8561963ae2c51bbbfb8757 269 ProSitePatterns PS01240 Purine and other phosphorylases family 2 signature. 76 117 - T 22-04-2016 IPR018099 Purine phosphorylase, family 2, conserved site GO:0016763 SII_RS05275 e49efe85eb8561963ae2c51bbbfb8757 269 Pfam PF01048 Phosphorylase superfamily 24 267 1.3E-48 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 SII_RS05275 e49efe85eb8561963ae2c51bbbfb8757 269 PIRSF PIRSF000477 1 269 1.5E-105 T 22-04-2016 IPR011268 Purine nucleoside phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|UniPathway: UPA00606 SII_RS05275 e49efe85eb8561963ae2c51bbbfb8757 269 Gene3D G3DSA:3.40.50.1580 3 269 8.8E-100 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 SII_RS05275 e49efe85eb8561963ae2c51bbbfb8757 269 TIGRFAM TIGR01700 PNPH: purine nucleoside phosphorylase I, inosine and guanosine-specific 24 266 3.4E-101 T 22-04-2016 IPR011270 Purine nucleoside phosphorylase I, inosine/guanosine-specific GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|UniPathway: UPA00606 SII_RS02935 ebb987e59ae6ba5f472f042b099acaaf 428 Pfam PF16325 Peptidase family U32 C-terminal domain 326 407 2.3E-19 T 22-04-2016 IPR032525 Peptidase family U32, C-terminal KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- SII_RS02935 ebb987e59ae6ba5f472f042b099acaaf 428 PANTHER PTHR30217:SF6 1 427 2.2E-224 T 22-04-2016 SII_RS02935 ebb987e59ae6ba5f472f042b099acaaf 428 PANTHER PTHR30217 1 427 2.2E-224 T 22-04-2016 SII_RS02935 ebb987e59ae6ba5f472f042b099acaaf 428 ProSitePatterns PS01276 Peptidase family U32 signature. 165 183 - T 22-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- SII_RS02935 ebb987e59ae6ba5f472f042b099acaaf 428 Pfam PF01136 Peptidase family U32 84 311 1.6E-84 T 22-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- SII_RS06025 7963b7834f9d71784a28dab754a0a8d7 141 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 66 4.2E-30 T 22-04-2016 IPR020784 Ribosomal protein L11, N-terminal SII_RS06025 7963b7834f9d71784a28dab754a0a8d7 141 Gene3D G3DSA:1.10.10.250 72 140 4.7E-34 T 22-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 SII_RS06025 7963b7834f9d71784a28dab754a0a8d7 141 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 73 1.0E-15 T 22-04-2016 SII_RS06025 7963b7834f9d71784a28dab754a0a8d7 141 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 141 31.413 T 22-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 SII_RS06025 7963b7834f9d71784a28dab754a0a8d7 141 SMART SM00649 9 140 3.0E-86 T 22-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 SII_RS06025 7963b7834f9d71784a28dab754a0a8d7 141 SUPERFAMILY SSF54747 1 84 9.55E-30 T 22-04-2016 IPR020784 Ribosomal protein L11, N-terminal SII_RS06025 7963b7834f9d71784a28dab754a0a8d7 141 ProSitePatterns PS00359 Ribosomal protein L11 signature. 126 141 - T 22-04-2016 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 SII_RS06025 7963b7834f9d71784a28dab754a0a8d7 141 PANTHER PTHR11661 1 141 3.3E-73 T 22-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 SII_RS06025 7963b7834f9d71784a28dab754a0a8d7 141 Pfam PF00298 Ribosomal protein L11, RNA binding domain 71 139 2.9E-26 T 22-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 SII_RS06025 7963b7834f9d71784a28dab754a0a8d7 141 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 141 1.7E-63 T 22-04-2016 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 SII_RS06025 7963b7834f9d71784a28dab754a0a8d7 141 Gene3D G3DSA:3.30.1550.10 2 71 7.4E-38 T 22-04-2016 IPR020784 Ribosomal protein L11, N-terminal SII_RS06025 7963b7834f9d71784a28dab754a0a8d7 141 SUPERFAMILY SSF46906 67 139 3.53E-28 T 22-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 SII_RS09225 703a4074ee4725433d1ab8ee7be5f383 635 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 72 621 1.6E-161 T 22-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 SII_RS09225 703a4074ee4725433d1ab8ee7be5f383 635 SUPERFAMILY SSF81665 71 125 3.14E-8 T 22-04-2016 SII_RS09225 703a4074ee4725433d1ab8ee7be5f383 635 SUPERFAMILY SSF81665 223 317 3.14E-8 T 22-04-2016 SII_RS09225 703a4074ee4725433d1ab8ee7be5f383 635 SUPERFAMILY SSF81665 568 595 3.14E-8 T 22-04-2016 SII_RS09225 703a4074ee4725433d1ab8ee7be5f383 635 Pfam PF00122 E1-E2 ATPase 92 313 2.5E-48 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 SII_RS09225 703a4074ee4725433d1ab8ee7be5f383 635 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 172 186 2.4E-26 T 22-04-2016 SII_RS09225 703a4074ee4725433d1ab8ee7be5f383 635 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 466 476 2.4E-26 T 22-04-2016 SII_RS09225 703a4074ee4725433d1ab8ee7be5f383 635 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 323 337 2.4E-26 T 22-04-2016 SII_RS09225 703a4074ee4725433d1ab8ee7be5f383 635 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 519 538 2.4E-26 T 22-04-2016 SII_RS09225 703a4074ee4725433d1ab8ee7be5f383 635 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 542 554 2.4E-26 T 22-04-2016 SII_RS09225 703a4074ee4725433d1ab8ee7be5f383 635 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 444 455 2.4E-26 T 22-04-2016 SII_RS09225 703a4074ee4725433d1ab8ee7be5f383 635 Gene3D G3DSA:3.40.50.1000 307 326 7.6E-42 T 22-04-2016 IPR023214 HAD-like domain SII_RS09225 703a4074ee4725433d1ab8ee7be5f383 635 Gene3D G3DSA:3.40.50.1000 451 562 7.6E-42 T 22-04-2016 IPR023214 HAD-like domain SII_RS09225 703a4074ee4725433d1ab8ee7be5f383 635 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 94 594 2.4E-80 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 SII_RS09225 703a4074ee4725433d1ab8ee7be5f383 635 Gene3D G3DSA:3.40.1110.10 327 353 1.5E-4 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 SII_RS09225 703a4074ee4725433d1ab8ee7be5f383 635 PANTHER PTHR24093:SF317 6 594 1.2E-150 T 22-04-2016 SII_RS09225 703a4074ee4725433d1ab8ee7be5f383 635 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 550 575 4.5E-7 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 SII_RS09225 703a4074ee4725433d1ab8ee7be5f383 635 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 519 535 4.5E-7 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 SII_RS09225 703a4074ee4725433d1ab8ee7be5f383 635 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 491 507 4.5E-7 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 SII_RS09225 703a4074ee4725433d1ab8ee7be5f383 635 PANTHER PTHR24093 6 594 1.2E-150 T 22-04-2016 SII_RS09225 703a4074ee4725433d1ab8ee7be5f383 635 Pfam PF00702 haloacid dehalogenase-like hydrolase 319 530 2.4E-34 T 22-04-2016 SII_RS09225 703a4074ee4725433d1ab8ee7be5f383 635 Gene3D G3DSA:3.40.1110.10 354 450 2.0E-9 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 SII_RS09225 703a4074ee4725433d1ab8ee7be5f383 635 Gene3D G3DSA:2.70.150.10 73 223 7.5E-24 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 SII_RS09225 703a4074ee4725433d1ab8ee7be5f383 635 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 325 331 - T 22-04-2016 IPR018303 P-type ATPase, phosphorylation site SII_RS09225 703a4074ee4725433d1ab8ee7be5f383 635 SUPERFAMILY SSF81653 127 222 7.19E-21 T 22-04-2016 SII_RS09225 703a4074ee4725433d1ab8ee7be5f383 635 SUPERFAMILY SSF56784 321 341 7.46E-54 T 22-04-2016 IPR023214 HAD-like domain SII_RS09225 703a4074ee4725433d1ab8ee7be5f383 635 SUPERFAMILY SSF56784 395 619 7.46E-54 T 22-04-2016 IPR023214 HAD-like domain SII_RS09225 703a4074ee4725433d1ab8ee7be5f383 635 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 72 622 1.1E-135 T 22-04-2016 SII_RS08800 fc30dd6ba561a6f8ab748e83550479de 214 SUPERFAMILY SSF52540 19 198 2.47E-14 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS08800 fc30dd6ba561a6f8ab748e83550479de 214 Gene3D G3DSA:3.40.50.300 25 200 7.4E-22 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS08800 fc30dd6ba561a6f8ab748e83550479de 214 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 25 198 3.6E-16 T 22-04-2016 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0008152|GO:0016301 SII_RS02385 51c032e96f54d65daeb4e41994419e08 178 Hamap MF_01416 ATP synthase subunit delta [atpD]. 4 178 12.17 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 SII_RS02385 51c032e96f54d65daeb4e41994419e08 178 Pfam PF00213 ATP synthase delta (OSCP) subunit 10 177 2.1E-26 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 SII_RS02385 51c032e96f54d65daeb4e41994419e08 178 Gene3D G3DSA:1.10.520.20 8 94 1.4E-8 T 22-04-2016 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain SII_RS02385 51c032e96f54d65daeb4e41994419e08 178 PRINTS PR00125 ATP synthase delta subunit signature 152 170 7.0E-12 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 SII_RS02385 51c032e96f54d65daeb4e41994419e08 178 PRINTS PR00125 ATP synthase delta subunit signature 137 152 7.0E-12 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 SII_RS02385 51c032e96f54d65daeb4e41994419e08 178 PRINTS PR00125 ATP synthase delta subunit signature 8 27 7.0E-12 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 SII_RS02385 51c032e96f54d65daeb4e41994419e08 178 PRINTS PR00125 ATP synthase delta subunit signature 75 86 7.0E-12 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 SII_RS02385 51c032e96f54d65daeb4e41994419e08 178 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 10 176 3.1E-21 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 SII_RS02385 51c032e96f54d65daeb4e41994419e08 178 PANTHER PTHR11910 28 178 9.2E-20 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 SII_RS02385 51c032e96f54d65daeb4e41994419e08 178 SUPERFAMILY SSF47928 5 96 2.35E-12 T 22-04-2016 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain SII_RS05235 4352c1061449ba26c38e571f0535b559 388 PIRSF PIRSF001456 1 380 1.0E-121 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 SII_RS05235 4352c1061449ba26c38e571f0535b559 388 TIGRFAM TIGR00033 aroC: chorismate synthase 1 368 2.9E-136 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 SII_RS05235 4352c1061449ba26c38e571f0535b559 388 ProSitePatterns PS00787 Chorismate synthase signature 1. 7 22 - T 22-04-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 SII_RS05235 4352c1061449ba26c38e571f0535b559 388 Gene3D G3DSA:3.60.150.10 1 386 1.1E-146 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 SII_RS05235 4352c1061449ba26c38e571f0535b559 388 Hamap MF_00300 Chorismate synthase [aroC]. 1 370 35.217 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 SII_RS05235 4352c1061449ba26c38e571f0535b559 388 ProSitePatterns PS00788 Chorismate synthase signature 2. 129 145 - T 22-04-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 SII_RS05235 4352c1061449ba26c38e571f0535b559 388 Pfam PF01264 Chorismate synthase 1 363 9.7E-115 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 SII_RS05235 4352c1061449ba26c38e571f0535b559 388 PANTHER PTHR21085:SF0 1 386 1.4E-176 T 22-04-2016 SII_RS05235 4352c1061449ba26c38e571f0535b559 388 SUPERFAMILY SSF103263 1 386 1.57E-145 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 SII_RS05235 4352c1061449ba26c38e571f0535b559 388 ProSitePatterns PS00789 Chorismate synthase signature 3. 337 353 - T 22-04-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 SII_RS05235 4352c1061449ba26c38e571f0535b559 388 PANTHER PTHR21085 1 386 1.4E-176 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 SII_RS04145 9c2c24bb3810269471469a386ba7a137 244 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 223 239 8.5E-7 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 SII_RS04145 9c2c24bb3810269471469a386ba7a137 244 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 208 223 8.5E-7 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 SII_RS04145 9c2c24bb3810269471469a386ba7a137 244 PANTHER PTHR26402 2 119 2.0E-39 T 22-04-2016 SII_RS04145 9c2c24bb3810269471469a386ba7a137 244 Gene3D G3DSA:1.10.10.60 146 193 8.3E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SII_RS04145 9c2c24bb3810269471469a386ba7a137 244 SMART SM00448 2 116 7.4E-34 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SII_RS04145 9c2c24bb3810269471469a386ba7a137 244 SUPERFAMILY SSF46689 146 190 2.78E-5 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SII_RS04145 9c2c24bb3810269471469a386ba7a137 244 SMART SM00342 156 239 5.4E-31 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SII_RS04145 9c2c24bb3810269471469a386ba7a137 244 SUPERFAMILY SSF52172 3 120 1.85E-36 T 22-04-2016 IPR011006 CheY-like superfamily SII_RS04145 9c2c24bb3810269471469a386ba7a137 244 Pfam PF12833 Helix-turn-helix domain 162 240 7.5E-20 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SII_RS04145 9c2c24bb3810269471469a386ba7a137 244 Gene3D G3DSA:3.40.50.2300 3 130 1.1E-37 T 22-04-2016 SII_RS04145 9c2c24bb3810269471469a386ba7a137 244 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 193 235 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 SII_RS04145 9c2c24bb3810269471469a386ba7a137 244 SUPERFAMILY SSF46689 193 241 1.25E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SII_RS04145 9c2c24bb3810269471469a386ba7a137 244 Pfam PF00072 Response regulator receiver domain 4 115 4.8E-30 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SII_RS04145 9c2c24bb3810269471469a386ba7a137 244 Gene3D G3DSA:1.10.10.60 194 241 6.8E-17 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SII_RS03135 2ed3359723d4b8592bf9d78246fd6cd2 166 Pfam PF00466 Ribosomal protein L10 7 102 1.5E-26 T 22-04-2016 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 SII_RS03135 2ed3359723d4b8592bf9d78246fd6cd2 166 PANTHER PTHR11560 1 165 2.1E-54 T 22-04-2016 SII_RS03135 2ed3359723d4b8592bf9d78246fd6cd2 166 ProSitePatterns PS01109 Ribosomal protein L10 signature. 9 43 - T 22-04-2016 IPR002363 Ribosomal protein L10, eubacterial, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SII_RS03135 2ed3359723d4b8592bf9d78246fd6cd2 166 SUPERFAMILY SSF160369 7 161 6.28E-51 T 22-04-2016 SII_RS03135 2ed3359723d4b8592bf9d78246fd6cd2 166 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 4 162 27.211 T 22-04-2016 IPR022973 Ribosomal protein L10 SII_RS03540 f37e82d03bc12be43b22af884448c3e9 493 ProSitePatterns PS01163 Galactose-1-phosphate uridyl transferase family 2 signature. 254 271 - T 22-04-2016 IPR023425 Galactose-1-phosphate uridyl transferase, class II, conserved site GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 SII_RS03540 f37e82d03bc12be43b22af884448c3e9 493 PIRSF PIRSF006005 1 492 9.3E-234 T 22-04-2016 IPR000766 Galactose-1-phosphate uridyl transferase, class II GO:0005737|GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 SII_RS03540 f37e82d03bc12be43b22af884448c3e9 493 PANTHER PTHR39191:SF1 3 493 4.4E-180 T 22-04-2016 SII_RS03540 f37e82d03bc12be43b22af884448c3e9 493 Hamap MF_00571 Galactose-1-phosphate uridylyltransferase [galT]. 1 493 267.903 T 22-04-2016 IPR000766 Galactose-1-phosphate uridyl transferase, class II GO:0005737|GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 SII_RS03540 f37e82d03bc12be43b22af884448c3e9 493 Pfam PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain 242 435 3.4E-36 T 22-04-2016 IPR005850 Galactose-1-phosphate uridyl transferase, C-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 SII_RS03540 f37e82d03bc12be43b22af884448c3e9 493 Pfam PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain 19 226 5.4E-38 T 22-04-2016 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 SII_RS03540 f37e82d03bc12be43b22af884448c3e9 493 TIGRFAM TIGR01239 galT_2: galactose-1-phosphate uridylyltransferase 6 488 3.9E-231 T 22-04-2016 IPR000766 Galactose-1-phosphate uridyl transferase, class II GO:0005737|GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 SII_RS03540 f37e82d03bc12be43b22af884448c3e9 493 PANTHER PTHR39191 3 493 4.4E-180 T 22-04-2016 SII_RS05835 2d2fc610d422521c7c6a082e772742a1 452 PANTHER PTHR21581:SF11 198 341 3.3E-69 T 22-04-2016 SII_RS05835 2d2fc610d422521c7c6a082e772742a1 452 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 44 291 3.3E-48 T 22-04-2016 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 SII_RS05835 2d2fc610d422521c7c6a082e772742a1 452 PANTHER PTHR21581:SF11 45 182 3.3E-69 T 22-04-2016 SII_RS05835 2d2fc610d422521c7c6a082e772742a1 452 Pfam PF09211 Domain of unknown function (DUF1958) 320 375 1.1E-18 T 22-04-2016 IPR015294 Penicillin-binding protein 4, C-terminal domain SII_RS05835 2d2fc610d422521c7c6a082e772742a1 452 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 127 144 1.7E-12 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 SII_RS05835 2d2fc610d422521c7c6a082e772742a1 452 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 155 168 1.7E-12 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 SII_RS05835 2d2fc610d422521c7c6a082e772742a1 452 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 70 81 1.7E-12 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 SII_RS05835 2d2fc610d422521c7c6a082e772742a1 452 PANTHER PTHR21581 45 182 3.3E-69 T 22-04-2016 SII_RS05835 2d2fc610d422521c7c6a082e772742a1 452 SUPERFAMILY SSF69189 319 371 3.53E-9 T 22-04-2016 IPR015956 Penicillin-binding protein-associated GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 SII_RS05835 2d2fc610d422521c7c6a082e772742a1 452 Gene3D G3DSA:3.40.710.10 38 315 2.2E-72 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SII_RS05835 2d2fc610d422521c7c6a082e772742a1 452 PANTHER PTHR21581 198 341 3.3E-69 T 22-04-2016 SII_RS05835 2d2fc610d422521c7c6a082e772742a1 452 SUPERFAMILY SSF56601 5 317 2.37E-62 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SII_RS05835 2d2fc610d422521c7c6a082e772742a1 452 Gene3D G3DSA:2.30.140.20 318 377 1.8E-20 T 22-04-2016 IPR015294 Penicillin-binding protein 4, C-terminal domain SII_RS03705 821378ad0ec32410a1999c40a4196dad 197 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 4 189 3.4E-54 T 22-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 SII_RS03705 821378ad0ec32410a1999c40a4196dad 197 Gene3D G3DSA:3.40.50.300 2 194 2.2E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS03705 821378ad0ec32410a1999c40a4196dad 197 PANTHER PTHR10695 4 194 2.1E-62 T 22-04-2016 SII_RS03705 821378ad0ec32410a1999c40a4196dad 197 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 2 195 25.596 T 22-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 SII_RS03705 821378ad0ec32410a1999c40a4196dad 197 SUPERFAMILY SSF52540 1 193 8.37E-35 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS03705 821378ad0ec32410a1999c40a4196dad 197 Pfam PF01121 Dephospho-CoA kinase 4 181 1.4E-52 T 22-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 SII_RS01865 836ccae88393ad7fe38f06ce15acbd9b 188 SUPERFAMILY SSF46785 83 157 7.69E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SII_RS01865 836ccae88393ad7fe38f06ce15acbd9b 188 Gene3D G3DSA:1.10.10.10 5 78 1.2E-15 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SII_RS01865 836ccae88393ad7fe38f06ce15acbd9b 188 PANTHER PTHR34298:SF2 1 188 7.6E-54 T 22-04-2016 SII_RS01865 836ccae88393ad7fe38f06ce15acbd9b 188 Gene3D G3DSA:1.10.10.10 84 157 3.2E-33 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SII_RS01865 836ccae88393ad7fe38f06ce15acbd9b 188 PIRSF PIRSF019345 1 188 1.3E-49 T 22-04-2016 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 SII_RS01865 836ccae88393ad7fe38f06ce15acbd9b 188 TIGRFAM TIGR00281 TIGR00281: segregation and condensation protein B 5 171 1.3E-44 T 22-04-2016 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 SII_RS01865 836ccae88393ad7fe38f06ce15acbd9b 188 PANTHER PTHR34298 1 188 7.6E-54 T 22-04-2016 SII_RS01865 836ccae88393ad7fe38f06ce15acbd9b 188 Hamap MF_01804 Segregation and condensation protein B [scpB]. 1 179 33.787 T 22-04-2016 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 SII_RS01865 836ccae88393ad7fe38f06ce15acbd9b 188 Pfam PF04079 Segregation and condensation complex subunit ScpB 6 164 5.8E-53 T 22-04-2016 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 SII_RS01865 836ccae88393ad7fe38f06ce15acbd9b 188 SUPERFAMILY SSF46785 4 78 3.8E-13 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SII_RS00400 b1bc1fe510650cb147cad1394c82968e 199 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 42 192 5.4E-36 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 SII_RS00400 b1bc1fe510650cb147cad1394c82968e 199 PANTHER PTHR12383 17 199 1.2E-30 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 SII_RS00400 b1bc1fe510650cb147cad1394c82968e 199 SUPERFAMILY SSF51306 57 198 6.41E-37 T 22-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C SII_RS00400 b1bc1fe510650cb147cad1394c82968e 199 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 102 114 6.1E-13 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 SII_RS00400 b1bc1fe510650cb147cad1394c82968e 199 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 150 169 6.1E-13 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 SII_RS00400 b1bc1fe510650cb147cad1394c82968e 199 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 57 73 6.1E-13 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 SII_RS00400 b1bc1fe510650cb147cad1394c82968e 199 Gene3D G3DSA:2.10.109.10 54 112 6.2E-23 T 22-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain SII_RS00400 b1bc1fe510650cb147cad1394c82968e 199 Gene3D G3DSA:2.10.109.10 150 196 6.2E-23 T 22-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain SII_RS00400 b1bc1fe510650cb147cad1394c82968e 199 Pfam PF00717 Peptidase S24-like 63 125 6.3E-10 T 22-04-2016 IPR019759 Peptidase S24/S26A/S26B SII_RS00400 b1bc1fe510650cb147cad1394c82968e 199 ProSitePatterns PS00761 Signal peptidases I signature 3. 155 168 - T 22-04-2016 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 SII_RS09370 618449cdaead935770d055cfb808cdad 219 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 133 185 3.5E-12 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SII_RS09370 618449cdaead935770d055cfb808cdad 219 SUPERFAMILY SSF56784 3 190 1.21E-25 T 22-04-2016 IPR023214 HAD-like domain SII_RS09370 618449cdaead935770d055cfb808cdad 219 Pfam PF13419 Haloacid dehalogenase-like hydrolase 53 185 1.4E-6 T 22-04-2016 IPR023214 HAD-like domain SII_RS09370 618449cdaead935770d055cfb808cdad 219 PANTHER PTHR12725:SF63 2 205 2.8E-23 T 22-04-2016 SII_RS09370 618449cdaead935770d055cfb808cdad 219 PANTHER PTHR12725 2 205 2.8E-23 T 22-04-2016 SII_RS09370 618449cdaead935770d055cfb808cdad 219 Gene3D G3DSA:3.40.50.1000 1 200 6.0E-30 T 22-04-2016 IPR023214 HAD-like domain SII_RS08975 0a22bf93574ef7a9ae06cd6e256dd4a5 88 PIRSF PIRSF037258 1 87 4.2E-43 T 22-04-2016 IPR009309 Uncharacterised protein family UPF0297 SII_RS08975 0a22bf93574ef7a9ae06cd6e256dd4a5 88 Pfam PF06135 Bacterial protein of unknown function (DUF965) 5 82 1.6E-36 T 22-04-2016 IPR009309 Uncharacterised protein family UPF0297 SII_RS08975 0a22bf93574ef7a9ae06cd6e256dd4a5 88 Hamap MF_01507 UPF0297 protein . 1 84 26.635 T 22-04-2016 IPR009309 Uncharacterised protein family UPF0297 SII_RS08975 0a22bf93574ef7a9ae06cd6e256dd4a5 88 PANTHER PTHR40067 2 88 2.3E-45 T 22-04-2016 SII_RS08100 de0a52981a4e113463a45228d4fbc5e4 289 Gene3D G3DSA:1.10.3470.10 19 273 6.1E-10 T 22-04-2016 IPR029022 ABC transporter, BtuC-like SII_RS08100 de0a52981a4e113463a45228d4fbc5e4 289 SUPERFAMILY SSF81345 15 267 1.57E-41 T 22-04-2016 IPR029022 ABC transporter, BtuC-like SII_RS08100 de0a52981a4e113463a45228d4fbc5e4 289 PANTHER PTHR30477 9 289 1.3E-125 T 22-04-2016 SII_RS08100 de0a52981a4e113463a45228d4fbc5e4 289 PANTHER PTHR30477:SF13 9 289 1.3E-125 T 22-04-2016 SII_RS08100 de0a52981a4e113463a45228d4fbc5e4 289 Pfam PF00950 ABC 3 transport family 17 271 1.5E-86 T 22-04-2016 IPR001626 ABC-3 GO:0005524|GO:0006810|GO:0016020|GO:0042626 SII_RS05465 68dff63c6905896828e1548abf0b0e42 142 Gene3D G3DSA:3.10.180.10 1 137 1.4E-43 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SII_RS05465 68dff63c6905896828e1548abf0b0e42 142 SUPERFAMILY SSF54593 3 133 8.25E-27 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SII_RS05465 68dff63c6905896828e1548abf0b0e42 142 PANTHER PTHR36503:SF1 1 138 6.6E-69 T 22-04-2016 SII_RS05465 68dff63c6905896828e1548abf0b0e42 142 PANTHER PTHR36503 1 138 6.6E-69 T 22-04-2016 SII_RS05465 68dff63c6905896828e1548abf0b0e42 142 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 7 126 3.0E-11 T 22-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain SII_RS02820 c9114fb15401499cfbebc998afc0a203 572 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 208 311 3.1E-24 T 22-04-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SII_RS02820 c9114fb15401499cfbebc998afc0a203 572 SUPERFAMILY SSF53738 304 454 9.42E-30 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SII_RS02820 c9114fb15401499cfbebc998afc0a203 572 Gene3D G3DSA:3.40.120.10 230 306 6.9E-23 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SII_RS02820 c9114fb15401499cfbebc998afc0a203 572 Gene3D G3DSA:3.30.310.50 480 571 1.2E-25 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SII_RS02820 c9114fb15401499cfbebc998afc0a203 572 SUPERFAMILY SSF53738 27 236 2.0E-46 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SII_RS02820 c9114fb15401499cfbebc998afc0a203 572 PANTHER PTHR22573 20 572 3.5E-240 T 22-04-2016 SII_RS02820 c9114fb15401499cfbebc998afc0a203 572 Gene3D G3DSA:3.40.120.10 307 454 6.4E-37 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SII_RS02820 c9114fb15401499cfbebc998afc0a203 572 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 41 180 1.4E-40 T 22-04-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SII_RS02820 c9114fb15401499cfbebc998afc0a203 572 SUPERFAMILY SSF53738 227 311 3.02E-20 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SII_RS02820 c9114fb15401499cfbebc998afc0a203 572 SUPERFAMILY SSF55957 444 481 6.41E-17 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SII_RS02820 c9114fb15401499cfbebc998afc0a203 572 SUPERFAMILY SSF55957 512 571 6.41E-17 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SII_RS02820 c9114fb15401499cfbebc998afc0a203 572 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 138 147 - T 22-04-2016 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SII_RS02820 c9114fb15401499cfbebc998afc0a203 572 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 325 451 2.0E-21 T 22-04-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SII_RS02820 c9114fb15401499cfbebc998afc0a203 572 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 497 555 1.7E-11 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SII_RS02820 c9114fb15401499cfbebc998afc0a203 572 PANTHER PTHR22573:SF54 20 572 3.5E-240 T 22-04-2016 SII_RS02820 c9114fb15401499cfbebc998afc0a203 572 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 296 311 6.6E-5 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SII_RS02820 c9114fb15401499cfbebc998afc0a203 572 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 137 151 6.6E-5 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SII_RS02820 c9114fb15401499cfbebc998afc0a203 572 Gene3D G3DSA:3.40.120.10 19 215 6.1E-61 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SII_RS00215 7bc34f3eaf7d24e5c5b73e049729bc44 332 PANTHER PTHR30100:SF1 1 320 9.3E-126 T 22-04-2016 SII_RS00215 7bc34f3eaf7d24e5c5b73e049729bc44 332 Gene3D G3DSA:3.40.718.10 1 327 1.7E-129 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 SII_RS00215 7bc34f3eaf7d24e5c5b73e049729bc44 332 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 3 327 1.2E-113 T 22-04-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 SII_RS00215 7bc34f3eaf7d24e5c5b73e049729bc44 332 PIRSF PIRSF002465 1 331 4.1E-121 T 22-04-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 SII_RS00215 7bc34f3eaf7d24e5c5b73e049729bc44 332 Pfam PF02504 Fatty acid synthesis protein 3 320 8.9E-106 T 22-04-2016 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 UniPathway: UPA00085 SII_RS00215 7bc34f3eaf7d24e5c5b73e049729bc44 332 SUPERFAMILY SSF53659 2 326 4.11E-99 T 22-04-2016 SII_RS00215 7bc34f3eaf7d24e5c5b73e049729bc44 332 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 332 142.12 T 22-04-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 SII_RS00215 7bc34f3eaf7d24e5c5b73e049729bc44 332 PANTHER PTHR30100 1 320 9.3E-126 T 22-04-2016 SII_RS05200 ead7f5760c9a7acdbf4792402ebc2d84 277 SUPERFAMILY SSF55021 187 269 1.63E-21 T 22-04-2016 SII_RS05200 ead7f5760c9a7acdbf4792402ebc2d84 277 Pfam PF00800 Prephenate dehydratase 3 178 6.5E-56 T 22-04-2016 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 SII_RS05200 ead7f5760c9a7acdbf4792402ebc2d84 277 Gene3D G3DSA:3.40.190.10 91 165 6.5E-24 T 22-04-2016 SII_RS05200 ead7f5760c9a7acdbf4792402ebc2d84 277 SUPERFAMILY SSF53850 1 179 3.8E-51 T 22-04-2016 SII_RS05200 ead7f5760c9a7acdbf4792402ebc2d84 277 ProSitePatterns PS00858 Prephenate dehydratase signature 2. 220 227 - T 22-04-2016 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 SII_RS05200 ead7f5760c9a7acdbf4792402ebc2d84 277 Gene3D G3DSA:3.30.70.260 191 267 4.6E-25 T 22-04-2016 SII_RS05200 ead7f5760c9a7acdbf4792402ebc2d84 277 PANTHER PTHR21022 1 272 1.3E-95 T 22-04-2016 SII_RS05200 ead7f5760c9a7acdbf4792402ebc2d84 277 Gene3D G3DSA:3.40.190.10 1 90 4.3E-27 T 22-04-2016 SII_RS09030 380d4a3c7615104cd409b36b91fc5624 648 SMART SM01340 209 327 4.7E-50 T 22-04-2016 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 SII_RS09030 380d4a3c7615104cd409b36b91fc5624 648 SUPERFAMILY SSF54211 191 327 1.44E-34 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SII_RS09030 380d4a3c7615104cd409b36b91fc5624 648 Pfam PF08676 MutL C terminal dimerisation domain 449 592 2.3E-40 T 22-04-2016 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 SII_RS09030 380d4a3c7615104cd409b36b91fc5624 648 SUPERFAMILY SSF118116 445 634 2.35E-51 T 22-04-2016 SII_RS09030 380d4a3c7615104cd409b36b91fc5624 648 Gene3D G3DSA:3.30.230.10 203 326 1.3E-35 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SII_RS09030 380d4a3c7615104cd409b36b91fc5624 648 PANTHER PTHR10073 4 648 9.7E-167 T 22-04-2016 SII_RS09030 380d4a3c7615104cd409b36b91fc5624 648 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 3 307 1.2E-102 T 22-04-2016 IPR002099 DNA mismatch repair protein family GO:0005524|GO:0006298|GO:0030983 SII_RS09030 380d4a3c7615104cd409b36b91fc5624 648 SUPERFAMILY SSF55874 4 214 2.23E-52 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SII_RS09030 380d4a3c7615104cd409b36b91fc5624 648 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 209 326 8.4E-35 T 22-04-2016 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 SII_RS09030 380d4a3c7615104cd409b36b91fc5624 648 SMART SM00853 450 592 3.7E-47 T 22-04-2016 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 SII_RS09030 380d4a3c7615104cd409b36b91fc5624 648 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 2 632 27.508 T 22-04-2016 IPR020667 DNA mismatch repair protein, MutL GO:0006298 SII_RS09030 380d4a3c7615104cd409b36b91fc5624 648 Gene3D G3DSA:3.30.565.10 3 202 1.4E-73 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SII_RS09030 380d4a3c7615104cd409b36b91fc5624 648 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 25 120 1.5E-10 T 22-04-2016 SII_RS09030 380d4a3c7615104cd409b36b91fc5624 648 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 94 100 - T 22-04-2016 IPR014762 DNA mismatch repair, conserved site SII_RS05540 bdc6e9791731382293d99554879712ab 429 Pfam PF06824 Protein of unknown function (DUF1237) 24 420 1.6E-145 T 22-04-2016 IPR008313 Meiotically up-regulated gene 157 protein SII_RS05540 bdc6e9791731382293d99554879712ab 429 SUPERFAMILY SSF48208 4 426 4.37E-169 T 22-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 SII_RS05540 bdc6e9791731382293d99554879712ab 429 SMART SM01149 22 421 3.2E-257 T 22-04-2016 IPR008313 Meiotically up-regulated gene 157 protein SII_RS05540 bdc6e9791731382293d99554879712ab 429 PIRSF PIRSF028846 1 429 1.8E-200 T 22-04-2016 IPR008313 Meiotically up-regulated gene 157 protein SII_RS05540 bdc6e9791731382293d99554879712ab 429 Gene3D G3DSA:1.50.10.10 6 426 1.6E-169 T 22-04-2016 IPR012341 Six-hairpin glycosidase GO:0003824 SII_RS05540 bdc6e9791731382293d99554879712ab 429 PANTHER PTHR31047 6 426 1.6E-194 T 22-04-2016 SII_RS01020 7a400095714a49234bc13c8fa4a91ea7 560 Pfam PF00753 Metallo-beta-lactamase superfamily 20 168 7.4E-17 T 22-04-2016 IPR001279 Metallo-beta-lactamase SII_RS01020 7a400095714a49234bc13c8fa4a91ea7 560 PANTHER PTHR11203 1 559 3.1E-236 T 22-04-2016 SII_RS01020 7a400095714a49234bc13c8fa4a91ea7 560 Gene3D G3DSA:3.60.15.10 6 256 8.4E-77 T 22-04-2016 IPR001279 Metallo-beta-lactamase SII_RS01020 7a400095714a49234bc13c8fa4a91ea7 560 Hamap MF_01491 Ribonuclease J [rnj]. 5 556 45.292 T 22-04-2016 IPR030854 Ribonuclease J, bacteria GO:0004521|GO:0004534|GO:0006396|GO:0008270|GO:0090501 SII_RS01020 7a400095714a49234bc13c8fa4a91ea7 560 PANTHER PTHR11203:SF22 1 559 3.1E-236 T 22-04-2016 IPR004613 Ribonuclease J GO:0003723|GO:0046872 SII_RS01020 7a400095714a49234bc13c8fa4a91ea7 560 TIGRFAM TIGR00649 MG423: beta-CASP ribonuclease, RNase J family 11 553 7.7E-195 T 22-04-2016 IPR004613 Ribonuclease J GO:0003723|GO:0046872 SII_RS01020 7a400095714a49234bc13c8fa4a91ea7 560 SUPERFAMILY SSF56281 13 424 4.97E-91 T 22-04-2016 IPR001279 Metallo-beta-lactamase SII_RS01020 7a400095714a49234bc13c8fa4a91ea7 560 PIRSF PIRSF004803 1 556 9.5E-222 T 22-04-2016 IPR030854 Ribonuclease J, bacteria GO:0004521|GO:0004534|GO:0006396|GO:0008270|GO:0090501 SII_RS01020 7a400095714a49234bc13c8fa4a91ea7 560 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 359 408 4.4E-11 T 22-04-2016 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain SII_RS01020 7a400095714a49234bc13c8fa4a91ea7 560 SMART SM00849 22 216 5.5E-24 T 22-04-2016 IPR001279 Metallo-beta-lactamase SII_RS01020 7a400095714a49234bc13c8fa4a91ea7 560 ProSitePatterns PS01292 Uncharacterized protein family UPF0036 signature. 365 393 - T 22-04-2016 IPR001587 Ribonuclease J, conserved site SII_RS09440 0cdfcaca87a5cafd3bccbe734c1879c3 275 Pfam PF00005 ABC transporter 23 169 3.3E-33 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SII_RS09440 0cdfcaca87a5cafd3bccbe734c1879c3 275 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SII_RS09440 0cdfcaca87a5cafd3bccbe734c1879c3 275 Gene3D G3DSA:3.40.50.300 2 231 3.3E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS09440 0cdfcaca87a5cafd3bccbe734c1879c3 275 PANTHER PTHR24220 6 274 4.2E-102 T 22-04-2016 SII_RS09440 0cdfcaca87a5cafd3bccbe734c1879c3 275 TIGRFAM TIGR04520 ECF_ATPase_1: energy-coupling factor transporter ATPase 5 272 3.3E-112 T 22-04-2016 IPR030947 Energy-coupling factor transporter ATP-binding protein EcfA1 SII_RS09440 0cdfcaca87a5cafd3bccbe734c1879c3 275 SMART SM00382 32 217 8.1E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain SII_RS09440 0cdfcaca87a5cafd3bccbe734c1879c3 275 SUPERFAMILY SSF52540 4 230 3.13E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS09440 0cdfcaca87a5cafd3bccbe734c1879c3 275 PANTHER PTHR24220:SF435 6 274 4.2E-102 T 22-04-2016 SII_RS01770 c95c4439eec3e26aa38ae805ac957026 443 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 5 426 1.5E-120 T 22-04-2016 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SII_RS01770 c95c4439eec3e26aa38ae805ac957026 443 Gene3D G3DSA:3.40.1190.10 92 298 4.5E-57 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SII_RS01770 c95c4439eec3e26aa38ae805ac957026 443 Pfam PF01225 Mur ligase family, catalytic domain 4 103 3.4E-26 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 SII_RS01770 c95c4439eec3e26aa38ae805ac957026 443 SUPERFAMILY SSF53623 90 295 8.77E-54 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SII_RS01770 c95c4439eec3e26aa38ae805ac957026 443 PANTHER PTHR23135 1 425 3.0E-153 T 22-04-2016 SII_RS01770 c95c4439eec3e26aa38ae805ac957026 443 Gene3D G3DSA:3.40.50.720 3 90 7.0E-26 T 22-04-2016 IPR016040 NAD(P)-binding domain SII_RS01770 c95c4439eec3e26aa38ae805ac957026 443 Pfam PF02875 Mur ligase family, glutamate ligase domain 297 378 1.4E-16 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SII_RS01770 c95c4439eec3e26aa38ae805ac957026 443 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 2 437 34.474 T 22-04-2016 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SII_RS01770 c95c4439eec3e26aa38ae805ac957026 443 SUPERFAMILY SSF51984 3 87 1.31E-18 T 22-04-2016 SII_RS01770 c95c4439eec3e26aa38ae805ac957026 443 PANTHER PTHR23135:SF5 1 425 3.0E-153 T 22-04-2016 SII_RS01770 c95c4439eec3e26aa38ae805ac957026 443 Gene3D G3DSA:3.90.190.20 299 433 2.5E-43 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SII_RS01770 c95c4439eec3e26aa38ae805ac957026 443 SUPERFAMILY SSF53244 296 430 2.38E-37 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SII_RS01770 c95c4439eec3e26aa38ae805ac957026 443 Pfam PF08245 Mur ligase middle domain 108 276 1.7E-23 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SII_RS09355 14694af299c29bbe4c3853068f9e90a0 890 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 234 259 4.2E-6 T 22-04-2016 IPR023908 xxxLxxG heptad repeat SII_RS09355 14694af299c29bbe4c3853068f9e90a0 890 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 606 632 9.2E-7 T 22-04-2016 IPR023908 xxxLxxG heptad repeat SII_RS09355 14694af299c29bbe4c3853068f9e90a0 890 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 274 296 1.7E-4 T 22-04-2016 IPR023908 xxxLxxG heptad repeat SII_RS09355 14694af299c29bbe4c3853068f9e90a0 890 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 586 611 1.6E-4 T 22-04-2016 IPR023908 xxxLxxG heptad repeat SII_RS09355 14694af299c29bbe4c3853068f9e90a0 890 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 171 196 4.4E-5 T 22-04-2016 IPR023908 xxxLxxG heptad repeat SII_RS09355 14694af299c29bbe4c3853068f9e90a0 890 TIGRFAM TIGR03062 pip_yhgE_Cterm: YhgE/Pip C-terminal domain 685 886 4.8E-61 T 22-04-2016 IPR017501 Phage infection protein, YhgE, C-terminal SII_RS09355 14694af299c29bbe4c3853068f9e90a0 890 TIGRFAM TIGR03061 pip_yhgE_Nterm: YhgE/Pip N-terminal domain 4 166 1.5E-60 T 22-04-2016 IPR017500 Phage infection protein, YhgE, N-terminal SII_RS09355 14694af299c29bbe4c3853068f9e90a0 890 PANTHER PTHR30294 701 875 2.8E-78 T 22-04-2016 SII_RS09355 14694af299c29bbe4c3853068f9e90a0 890 PANTHER PTHR30294 3 251 2.8E-78 T 22-04-2016 SII_RS09355 14694af299c29bbe4c3853068f9e90a0 890 SUPERFAMILY SSF58104 151 343 2.27E-5 T 22-04-2016 SII_RS09355 14694af299c29bbe4c3853068f9e90a0 890 Pfam PF12698 ABC-2 family transporter protein 21 219 6.4E-11 T 22-04-2016 SII_RS09355 14694af299c29bbe4c3853068f9e90a0 890 PANTHER PTHR30294:SF25 701 875 2.8E-78 T 22-04-2016 SII_RS09355 14694af299c29bbe4c3853068f9e90a0 890 PANTHER PTHR30294:SF25 3 251 2.8E-78 T 22-04-2016 SII_RS05335 ee3f665db011f1d79a4a2a25f4943b2d 279 Pfam PF01183 Glycosyl hydrolases family 25 67 251 4.5E-14 T 22-04-2016 IPR002053 Glycoside hydrolase, family 25 GO:0003796|GO:0009253|GO:0016998 SII_RS05335 ee3f665db011f1d79a4a2a25f4943b2d 279 SUPERFAMILY SSF51445 66 262 1.26E-34 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily SII_RS05335 ee3f665db011f1d79a4a2a25f4943b2d 279 PANTHER PTHR34135:SF2 59 271 3.4E-49 T 22-04-2016 SII_RS05335 ee3f665db011f1d79a4a2a25f4943b2d 279 Gene3D G3DSA:3.20.20.80 63 259 1.6E-35 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 SII_RS05335 ee3f665db011f1d79a4a2a25f4943b2d 279 PANTHER PTHR34135 59 271 3.4E-49 T 22-04-2016 SII_RS01890 dc59e69d10f87e5319a3d9fe76810f84 170 Pfam PF00588 SpoU rRNA Methylase family 5 146 2.1E-32 T 22-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 SII_RS01890 dc59e69d10f87e5319a3d9fe76810f84 170 Gene3D G3DSA:3.40.1280.10 5 167 3.1E-59 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal SII_RS01890 dc59e69d10f87e5319a3d9fe76810f84 170 PANTHER PTHR12029 6 159 8.2E-70 T 22-04-2016 SII_RS01890 dc59e69d10f87e5319a3d9fe76810f84 170 PIRSF PIRSF029256 4 158 1.9E-59 T 22-04-2016 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 SII_RS01890 dc59e69d10f87e5319a3d9fe76810f84 170 PANTHER PTHR12029:SF31 6 159 8.2E-70 T 22-04-2016 SII_RS01890 dc59e69d10f87e5319a3d9fe76810f84 170 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 5 155 33.764 T 22-04-2016 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 SII_RS01890 dc59e69d10f87e5319a3d9fe76810f84 170 SUPERFAMILY SSF75217 6 156 8.5E-39 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases SII_RS05840 b7d4d0afbe41b3a90f3216cc1a6d6b82 235 SUPERFAMILY SSF100950 1 234 2.05E-77 T 22-04-2016 SII_RS05840 b7d4d0afbe41b3a90f3216cc1a6d6b82 235 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 17 222 3.0E-11 T 22-04-2016 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 SII_RS05840 b7d4d0afbe41b3a90f3216cc1a6d6b82 235 ProSitePatterns PS01161 Glucosamine/galactosamine-6-phosphate isomerases signature. 112 130 - T 22-04-2016 IPR018321 Glucosamine-6-phosphate isomerase, conserved site GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|UniPathway: UPA00629 SII_RS05840 b7d4d0afbe41b3a90f3216cc1a6d6b82 235 Hamap MF_01241 Glucosamine-6-phosphate deaminase [nagB]. 1 233 39.806 T 22-04-2016 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|UniPathway: UPA00629 SII_RS05840 b7d4d0afbe41b3a90f3216cc1a6d6b82 235 PANTHER PTHR11280 1 234 2.8E-95 T 22-04-2016 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|UniPathway: UPA00629 SII_RS05840 b7d4d0afbe41b3a90f3216cc1a6d6b82 235 Gene3D G3DSA:3.40.50.1360 1 234 1.1E-77 T 22-04-2016 SII_RS02405 fef9761f609bf3e403f4555b36a7c043 139 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 2 135 22.378 T 22-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 SII_RS02405 fef9761f609bf3e403f4555b36a7c043 139 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 20 91 4.0E-20 T 22-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 SII_RS02405 fef9761f609bf3e403f4555b36a7c043 139 SUPERFAMILY SSF51344 3 87 1.83E-23 T 22-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 SII_RS02405 fef9761f609bf3e403f4555b36a7c043 139 Pfam PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain 89 135 3.4E-13 T 22-04-2016 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain SII_RS02405 fef9761f609bf3e403f4555b36a7c043 139 Gene3D G3DSA:2.60.15.10 3 92 4.3E-27 T 22-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 SII_RS02405 fef9761f609bf3e403f4555b36a7c043 139 PANTHER PTHR13822 1 135 3.3E-32 T 22-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 SII_RS02405 fef9761f609bf3e403f4555b36a7c043 139 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 4 134 3.8E-28 T 22-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 SII_RS02405 fef9761f609bf3e403f4555b36a7c043 139 Gene3D G3DSA:1.20.5.440 93 136 4.1E-11 T 22-04-2016 SII_RS02405 fef9761f609bf3e403f4555b36a7c043 139 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 4 85 2.1E-26 T 22-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 SII_RS02915 6194940ed08db4a015d870451f94431a 127 PANTHER PTHR40070:SF1 1 127 1.4E-29 T 22-04-2016 SII_RS02915 6194940ed08db4a015d870451f94431a 127 PANTHER PTHR40070 1 127 1.4E-29 T 22-04-2016 SII_RS02915 6194940ed08db4a015d870451f94431a 127 Pfam PF06103 Bacterial protein of unknown function (DUF948) 4 91 1.1E-25 T 22-04-2016 IPR009293 Uncharacterised protein family UPF0478 SII_RS04620 e0c1e1569be0d9487bac4d2d5d7efc58 410 PANTHER PTHR11262 4 407 2.3E-230 T 22-04-2016 SII_RS04620 e0c1e1569be0d9487bac4d2d5d7efc58 410 SMART SM00994 10 49 1.8E-20 T 22-04-2016 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 SII_RS04620 e0c1e1569be0d9487bac4d2d5d7efc58 410 Gene3D G3DSA:1.10.8.60 312 408 2.2E-37 T 22-04-2016 SII_RS04620 e0c1e1569be0d9487bac4d2d5d7efc58 410 SMART SM01086 313 407 1.6E-34 T 22-04-2016 IPR019489 Clp ATPase, C-terminal SII_RS04620 e0c1e1569be0d9487bac4d2d5d7efc58 410 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 7 407 6.8E-194 T 22-04-2016 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 SII_RS04620 e0c1e1569be0d9487bac4d2d5d7efc58 410 SUPERFAMILY SSF57716 11 46 3.85E-11 T 22-04-2016 SII_RS04620 e0c1e1569be0d9487bac4d2d5d7efc58 410 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 3 410 51.229 T 22-04-2016 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 SII_RS04620 e0c1e1569be0d9487bac4d2d5d7efc58 410 Pfam PF06689 ClpX C4-type zinc finger 12 48 1.6E-17 T 22-04-2016 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 SII_RS04620 e0c1e1569be0d9487bac4d2d5d7efc58 410 SUPERFAMILY SSF52540 59 395 1.42E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS04620 e0c1e1569be0d9487bac4d2d5d7efc58 410 SMART SM00382 111 261 7.4E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain SII_RS04620 e0c1e1569be0d9487bac4d2d5d7efc58 410 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 313 390 8.6E-19 T 22-04-2016 IPR019489 Clp ATPase, C-terminal SII_RS04620 e0c1e1569be0d9487bac4d2d5d7efc58 410 Pfam PF07724 AAA domain (Cdc48 subfamily) 111 306 3.4E-48 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 SII_RS04620 e0c1e1569be0d9487bac4d2d5d7efc58 410 Gene3D G3DSA:3.40.50.300 62 253 1.9E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS04620 e0c1e1569be0d9487bac4d2d5d7efc58 410 Gene3D G3DSA:3.40.50.300 290 306 1.9E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS04620 e0c1e1569be0d9487bac4d2d5d7efc58 410 PANTHER PTHR11262:SF4 4 407 2.3E-230 T 22-04-2016 SII_RS09055 736f245927c0dcd9c711f4518a609dfa 562 Gene3D G3DSA:3.40.50.620 107 442 8.2E-112 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SII_RS09055 736f245927c0dcd9c711f4518a609dfa 562 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 6 562 1.3E-157 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 SII_RS09055 736f245927c0dcd9c711f4518a609dfa 562 SUPERFAMILY SSF52374 109 443 1.6E-97 T 22-04-2016 SII_RS09055 736f245927c0dcd9c711f4518a609dfa 562 PANTHER PTHR11956:SF1 4 562 3.8E-232 T 22-04-2016 SII_RS09055 736f245927c0dcd9c711f4518a609dfa 562 PANTHER PTHR11956 4 562 3.8E-232 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 SII_RS09055 736f245927c0dcd9c711f4518a609dfa 562 PRINTS PR01038 Arginyl-tRNA synthetase signature 128 144 8.1E-21 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 SII_RS09055 736f245927c0dcd9c711f4518a609dfa 562 PRINTS PR01038 Arginyl-tRNA synthetase signature 113 128 8.1E-21 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 SII_RS09055 736f245927c0dcd9c711f4518a609dfa 562 PRINTS PR01038 Arginyl-tRNA synthetase signature 152 165 8.1E-21 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 SII_RS09055 736f245927c0dcd9c711f4518a609dfa 562 PRINTS PR01038 Arginyl-tRNA synthetase signature 296 317 8.1E-21 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 SII_RS09055 736f245927c0dcd9c711f4518a609dfa 562 Gene3D G3DSA:3.30.1360.70 3 99 1.1E-28 T 22-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 SII_RS09055 736f245927c0dcd9c711f4518a609dfa 562 SMART SM00836 449 562 7.4E-41 T 22-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 SII_RS09055 736f245927c0dcd9c711f4518a609dfa 562 Gene3D G3DSA:1.10.730.10 443 562 2.0E-36 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SII_RS09055 736f245927c0dcd9c711f4518a609dfa 562 Hamap MF_00123 Arginine--tRNA ligase [argS]. 5 562 27.031 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 SII_RS09055 736f245927c0dcd9c711f4518a609dfa 562 Pfam PF05746 DALR anticodon binding domain 449 562 6.5E-32 T 22-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 SII_RS09055 736f245927c0dcd9c711f4518a609dfa 562 Pfam PF00750 tRNA synthetases class I (R) 93 434 2.2E-93 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 SII_RS09055 736f245927c0dcd9c711f4518a609dfa 562 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 5 83 2.5E-15 T 22-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 SII_RS09055 736f245927c0dcd9c711f4518a609dfa 562 SUPERFAMILY SSF47323 443 562 1.9E-32 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SII_RS09055 736f245927c0dcd9c711f4518a609dfa 562 SMART SM01016 5 83 2.3E-24 T 22-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 SII_RS09055 736f245927c0dcd9c711f4518a609dfa 562 SUPERFAMILY SSF55190 2 104 4.71E-26 T 22-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 SII_RS02030 25a6d51e52c3147b32b9f399324fbea8 552 PIRSF PIRSF003128 1 552 2.3E-174 T 22-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 SII_RS02030 25a6d51e52c3147b32b9f399324fbea8 552 PANTHER PTHR11059 2 551 1.8E-163 T 22-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 SII_RS02030 25a6d51e52c3147b32b9f399324fbea8 552 SUPERFAMILY SSF52540 1 219 1.99E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS02030 25a6d51e52c3147b32b9f399324fbea8 552 SUPERFAMILY SSF52540 2 50 3.96E-29 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS02030 25a6d51e52c3147b32b9f399324fbea8 552 SUPERFAMILY SSF52540 318 505 3.96E-29 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS02030 25a6d51e52c3147b32b9f399324fbea8 552 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 552 1.4E-166 T 22-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 SII_RS02030 25a6d51e52c3147b32b9f399324fbea8 552 Gene3D G3DSA:3.40.50.300 430 505 3.5E-7 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS02030 25a6d51e52c3147b32b9f399324fbea8 552 Pfam PF02463 RecF/RecN/SMC N terminal domain 2 506 1.9E-19 T 22-04-2016 IPR003395 RecF/RecN/SMC, N-terminal SII_RS02030 25a6d51e52c3147b32b9f399324fbea8 552 Gene3D G3DSA:3.40.50.300 1 208 2.5E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS04925 d5ceba47d29b6a7835107195f3bb08f7 260 Pfam PF00535 Glycosyl transferase family 2 7 126 8.5E-12 T 22-04-2016 IPR001173 Glycosyltransferase 2-like SII_RS04925 d5ceba47d29b6a7835107195f3bb08f7 260 Gene3D G3DSA:3.90.550.10 8 246 5.6E-25 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SII_RS04925 d5ceba47d29b6a7835107195f3bb08f7 260 SUPERFAMILY SSF53448 8 234 1.13E-30 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SII_RS04925 d5ceba47d29b6a7835107195f3bb08f7 260 PANTHER PTHR22916 8 134 1.2E-16 T 22-04-2016 SII_RS04925 d5ceba47d29b6a7835107195f3bb08f7 260 PANTHER PTHR22916 151 242 1.2E-16 T 22-04-2016 SII_RS04395 8fded14bb3a3cd7a615f948889138b62 511 ProSitePatterns PS00211 ABC transporters family signature. 404 418 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SII_RS04395 8fded14bb3a3cd7a615f948889138b62 511 SUPERFAMILY SSF52540 247 491 3.65E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS04395 8fded14bb3a3cd7a615f948889138b62 511 SUPERFAMILY SSF52540 5 226 1.41E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS04395 8fded14bb3a3cd7a615f948889138b62 511 PANTHER PTHR24220:SF239 8 384 5.3E-192 T 22-04-2016 SII_RS04395 8fded14bb3a3cd7a615f948889138b62 511 Gene3D G3DSA:3.40.50.300 3 228 6.5E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS04395 8fded14bb3a3cd7a615f948889138b62 511 Gene3D G3DSA:3.40.50.300 254 496 9.7E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS04395 8fded14bb3a3cd7a615f948889138b62 511 Pfam PF00005 ABC transporter 276 431 1.1E-17 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SII_RS04395 8fded14bb3a3cd7a615f948889138b62 511 Pfam PF00005 ABC transporter 23 171 5.3E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SII_RS04395 8fded14bb3a3cd7a615f948889138b62 511 SMART SM00382 284 480 7.9 T 22-04-2016 IPR003593 AAA+ ATPase domain SII_RS04395 8fded14bb3a3cd7a615f948889138b62 511 SMART SM00382 31 219 6.6E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain SII_RS04395 8fded14bb3a3cd7a615f948889138b62 511 PANTHER PTHR24220 8 384 5.3E-192 T 22-04-2016 SII_RS04895 4e090c5afbe6fcae5cb92ccb2d0c419a 269 PANTHER PTHR30413:SF8 8 269 6.6E-45 T 22-04-2016 SII_RS04895 4e090c5afbe6fcae5cb92ccb2d0c419a 269 PANTHER PTHR30413 8 269 6.6E-45 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 SII_RS04895 4e090c5afbe6fcae5cb92ccb2d0c419a 269 Pfam PF01061 ABC-2 type transporter 13 219 8.8E-19 T 22-04-2016 IPR013525 ABC-2 type transporter GO:0016020 SII_RS05410 b346eeb174d5d91045548365cfe6cb8c 326 TIGRFAM TIGR04171 RNR_1b_NrdF: ribonucleoside-diphosphate reductase, class 1b, beta subunit 12 323 1.8E-149 T 22-04-2016 IPR026494 Ribonucleoside reductase subunit beta, NrdF GO:0005971|GO:0009263 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 SII_RS05410 b346eeb174d5d91045548365cfe6cb8c 326 SUPERFAMILY SSF47240 2 323 4.79E-100 T 22-04-2016 IPR009078 Ferritin-like superfamily SII_RS05410 b346eeb174d5d91045548365cfe6cb8c 326 PIRSF PIRSF000355 1 321 6.7E-74 T 22-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 SII_RS05410 b346eeb174d5d91045548365cfe6cb8c 326 Pfam PF00268 Ribonucleotide reductase, small chain 15 286 3.3E-85 T 22-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 SII_RS05410 b346eeb174d5d91045548365cfe6cb8c 326 PANTHER PTHR23409 15 325 1.8E-89 T 22-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 SII_RS05410 b346eeb174d5d91045548365cfe6cb8c 326 Gene3D G3DSA:1.10.620.20 10 287 2.4E-86 T 22-04-2016 IPR012348 Ribonucleotide reductase-related GO:0016491|GO:0055114 Reactome: REACT_1698 SII_RS09020 c179e767df092a26d3875f27798c2f25 168 PANTHER PTHR10245:SF47 1 65 2.9E-22 T 22-04-2016 SII_RS09020 c179e767df092a26d3875f27798c2f25 168 Gene3D G3DSA:1.10.260.40 1 63 4.4E-27 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SII_RS09020 c179e767df092a26d3875f27798c2f25 168 PANTHER PTHR10245 1 65 2.9E-22 T 22-04-2016 SII_RS09020 c179e767df092a26d3875f27798c2f25 168 Pfam PF01381 Helix-turn-helix 9 61 5.9E-19 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SII_RS09020 c179e767df092a26d3875f27798c2f25 168 SMART SM00530 6 61 1.2E-18 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SII_RS09020 c179e767df092a26d3875f27798c2f25 168 SUPERFAMILY SSF47413 1 67 3.33E-19 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SII_RS03765 beec41d3fba62bb4576fc3f0cb9c501c 396 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 245 384 1.3E-69 T 22-04-2016 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 SII_RS03765 beec41d3fba62bb4576fc3f0cb9c501c 396 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 3 395 57.352 T 22-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 SII_RS03765 beec41d3fba62bb4576fc3f0cb9c501c 396 SUPERFAMILY SSF55973 5 110 1.22E-43 T 22-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 SII_RS03765 beec41d3fba62bb4576fc3f0cb9c501c 396 Gene3D G3DSA:3.30.300.10 12 143 1.1E-43 T 22-04-2016 SII_RS03765 beec41d3fba62bb4576fc3f0cb9c501c 396 Gene3D G3DSA:3.30.300.10 144 245 9.4E-48 T 22-04-2016 SII_RS03765 beec41d3fba62bb4576fc3f0cb9c501c 396 SUPERFAMILY SSF55973 124 244 4.91E-51 T 22-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 SII_RS03765 beec41d3fba62bb4576fc3f0cb9c501c 396 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 6 394 3.5E-179 T 22-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 SII_RS03765 beec41d3fba62bb4576fc3f0cb9c501c 396 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 127 137 - T 22-04-2016 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 SII_RS03765 beec41d3fba62bb4576fc3f0cb9c501c 396 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 5 102 6.4E-40 T 22-04-2016 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 SII_RS03765 beec41d3fba62bb4576fc3f0cb9c501c 396 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 271 279 - T 22-04-2016 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 SII_RS03765 beec41d3fba62bb4576fc3f0cb9c501c 396 SUPERFAMILY SSF55973 245 395 3.88E-69 T 22-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 SII_RS03765 beec41d3fba62bb4576fc3f0cb9c501c 396 PANTHER PTHR11964 1 393 3.3E-269 T 22-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 SII_RS03765 beec41d3fba62bb4576fc3f0cb9c501c 396 Pfam PF02772 S-adenosylmethionine synthetase, central domain 126 243 5.9E-48 T 22-04-2016 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 SII_RS03765 beec41d3fba62bb4576fc3f0cb9c501c 396 Gene3D G3DSA:3.30.300.10 256 395 3.0E-70 T 22-04-2016 SII_RS03765 beec41d3fba62bb4576fc3f0cb9c501c 396 PIRSF PIRSF000497 1 396 8.3E-176 T 22-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 SII_RS08060 3418097061a4ab5dfebd7b3bf71f8a4f 413 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 327 348 2.1E-53 T 22-04-2016 IPR000787 Peptidase M29, aminopeptidase II GO:0004177|GO:0006508 SII_RS08060 3418097061a4ab5dfebd7b3bf71f8a4f 413 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 17 34 2.1E-53 T 22-04-2016 IPR000787 Peptidase M29, aminopeptidase II GO:0004177|GO:0006508 SII_RS08060 3418097061a4ab5dfebd7b3bf71f8a4f 413 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 248 267 2.1E-53 T 22-04-2016 IPR000787 Peptidase M29, aminopeptidase II GO:0004177|GO:0006508 SII_RS08060 3418097061a4ab5dfebd7b3bf71f8a4f 413 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 304 324 2.1E-53 T 22-04-2016 IPR000787 Peptidase M29, aminopeptidase II GO:0004177|GO:0006508 SII_RS08060 3418097061a4ab5dfebd7b3bf71f8a4f 413 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 392 411 2.1E-53 T 22-04-2016 IPR000787 Peptidase M29, aminopeptidase II GO:0004177|GO:0006508 SII_RS08060 3418097061a4ab5dfebd7b3bf71f8a4f 413 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 366 388 2.1E-53 T 22-04-2016 IPR000787 Peptidase M29, aminopeptidase II GO:0004177|GO:0006508 SII_RS08060 3418097061a4ab5dfebd7b3bf71f8a4f 413 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 159 181 2.1E-53 T 22-04-2016 IPR000787 Peptidase M29, aminopeptidase II GO:0004177|GO:0006508 SII_RS08060 3418097061a4ab5dfebd7b3bf71f8a4f 413 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 82 101 2.1E-53 T 22-04-2016 IPR000787 Peptidase M29, aminopeptidase II GO:0004177|GO:0006508 SII_RS08060 3418097061a4ab5dfebd7b3bf71f8a4f 413 SUPERFAMILY SSF144052 6 412 3.66E-140 T 22-04-2016 SII_RS08060 3418097061a4ab5dfebd7b3bf71f8a4f 413 PANTHER PTHR34448:SF3 2 413 3.2E-237 T 22-04-2016 SII_RS08060 3418097061a4ab5dfebd7b3bf71f8a4f 413 PANTHER PTHR34448 2 413 3.2E-237 T 22-04-2016 SII_RS08060 3418097061a4ab5dfebd7b3bf71f8a4f 413 Pfam PF02073 Thermophilic metalloprotease (M29) 7 411 3.3E-162 T 22-04-2016 IPR000787 Peptidase M29, aminopeptidase II GO:0004177|GO:0006508 SII_RS02050 6256b0bad5cf1475b197cfbb5bb1b0d1 320 Pfam PF01032 FecCD transport family 36 316 3.5E-44 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 SII_RS02050 6256b0bad5cf1475b197cfbb5bb1b0d1 320 SUPERFAMILY SSF81345 9 316 2.75E-46 T 22-04-2016 IPR029022 ABC transporter, BtuC-like SII_RS02050 6256b0bad5cf1475b197cfbb5bb1b0d1 320 PANTHER PTHR30472:SF19 2 320 4.1E-96 T 22-04-2016 SII_RS02050 6256b0bad5cf1475b197cfbb5bb1b0d1 320 Gene3D G3DSA:1.10.3470.10 19 320 7.0E-48 T 22-04-2016 IPR029022 ABC transporter, BtuC-like SII_RS02050 6256b0bad5cf1475b197cfbb5bb1b0d1 320 PANTHER PTHR30472 2 320 4.1E-96 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 SII_RS06630 02ab7ad73e0f52baa4e5b3496c634879 453 SUPERFAMILY SSF55785 328 431 3.62E-6 T 22-04-2016 IPR000014 PAS domain SII_RS06630 02ab7ad73e0f52baa4e5b3496c634879 453 PANTHER PTHR24423:SF516 1 211 5.0E-66 T 22-04-2016 SII_RS06630 02ab7ad73e0f52baa4e5b3496c634879 453 PANTHER PTHR24423:SF516 325 446 5.0E-66 T 22-04-2016 SII_RS06630 02ab7ad73e0f52baa4e5b3496c634879 453 Pfam PF13596 PAS domain 330 439 1.3E-26 T 22-04-2016 SII_RS06630 02ab7ad73e0f52baa4e5b3496c634879 453 Gene3D G3DSA:1.20.120.520 82 263 6.3E-69 T 22-04-2016 SII_RS06630 02ab7ad73e0f52baa4e5b3496c634879 453 Gene3D G3DSA:1.20.120.520 312 335 6.3E-69 T 22-04-2016 SII_RS06630 02ab7ad73e0f52baa4e5b3496c634879 453 Pfam PF01814 Hemerythrin HHE cation binding domain 88 222 4.2E-25 T 22-04-2016 IPR012312 Haemerythrin-like SII_RS06630 02ab7ad73e0f52baa4e5b3496c634879 453 PANTHER PTHR24423 1 211 5.0E-66 T 22-04-2016 SII_RS06630 02ab7ad73e0f52baa4e5b3496c634879 453 PANTHER PTHR24423 325 446 5.0E-66 T 22-04-2016 SII_RS06630 02ab7ad73e0f52baa4e5b3496c634879 453 Pfam PF04282 Family of unknown function (DUF438) 9 76 1.3E-22 T 22-04-2016 IPR007380 Domain of unknown function DUF438 SII_RS06630 02ab7ad73e0f52baa4e5b3496c634879 453 Gene3D G3DSA:3.30.450.20 336 433 2.2E-7 T 22-04-2016 SII_RS05755 b86b27a5f9ad1b5d924a66cb99c5ecb5 412 SUPERFAMILY SSF55729 1 160 1.85E-38 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SII_RS05755 b86b27a5f9ad1b5d924a66cb99c5ecb5 412 Gene3D G3DSA:3.40.630.30 1 162 4.9E-44 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SII_RS05755 b86b27a5f9ad1b5d924a66cb99c5ecb5 412 Gene3D G3DSA:1.20.58.90 242 299 1.4E-4 T 22-04-2016 SII_RS05755 b86b27a5f9ad1b5d924a66cb99c5ecb5 412 SUPERFAMILY SSF55729 307 404 2.54E-30 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SII_RS05755 b86b27a5f9ad1b5d924a66cb99c5ecb5 412 PANTHER PTHR36174 1 411 1.2E-148 T 22-04-2016 SII_RS05755 b86b27a5f9ad1b5d924a66cb99c5ecb5 412 SUPERFAMILY SSF46589 240 303 2.04E-17 T 22-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 SII_RS05755 b86b27a5f9ad1b5d924a66cb99c5ecb5 412 Pfam PF02388 FemAB family 7 406 5.0E-149 T 22-04-2016 IPR003447 FemABX peptidyl transferase GO:0009252|GO:0016755 SII_RS05755 b86b27a5f9ad1b5d924a66cb99c5ecb5 412 PANTHER PTHR36174:SF2 1 411 1.2E-148 T 22-04-2016 SII_RS05755 b86b27a5f9ad1b5d924a66cb99c5ecb5 412 SUPERFAMILY SSF55729 163 240 2.54E-30 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SII_RS05755 b86b27a5f9ad1b5d924a66cb99c5ecb5 412 Gene3D G3DSA:3.40.630.30 306 383 1.3E-47 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SII_RS05755 b86b27a5f9ad1b5d924a66cb99c5ecb5 412 Gene3D G3DSA:3.40.630.30 163 239 1.3E-47 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SII_RS06310 42a7bb35ff020bd19a0615b260d6b704 254 ProSitePatterns PS00211 ABC transporters family signature. 152 166 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SII_RS06310 42a7bb35ff020bd19a0615b260d6b704 254 Pfam PF00005 ABC transporter 21 179 1.5E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SII_RS06310 42a7bb35ff020bd19a0615b260d6b704 254 Gene3D G3DSA:3.40.50.300 3 249 5.8E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS06310 42a7bb35ff020bd19a0615b260d6b704 254 PANTHER PTHR24220:SF358 5 110 6.7E-125 T 22-04-2016 SII_RS06310 42a7bb35ff020bd19a0615b260d6b704 254 PANTHER PTHR24220:SF358 126 254 6.7E-125 T 22-04-2016 SII_RS06310 42a7bb35ff020bd19a0615b260d6b704 254 PANTHER PTHR24220 5 110 6.7E-125 T 22-04-2016 SII_RS06310 42a7bb35ff020bd19a0615b260d6b704 254 PANTHER PTHR24220 126 254 6.7E-125 T 22-04-2016 SII_RS06310 42a7bb35ff020bd19a0615b260d6b704 254 SMART SM00382 28 228 2.0E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain SII_RS06310 42a7bb35ff020bd19a0615b260d6b704 254 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 229 251 2.2E-12 T 22-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal SII_RS06310 42a7bb35ff020bd19a0615b260d6b704 254 SUPERFAMILY SSF52540 3 250 3.2E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS02490 9eae87a4ed99852ee44f94a8b8aac892 247 SUPERFAMILY SSF46785 4 75 4.49E-14 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SII_RS02490 9eae87a4ed99852ee44f94a8b8aac892 247 PANTHER PTHR30363 1 244 1.5E-89 T 22-04-2016 SII_RS02490 9eae87a4ed99852ee44f94a8b8aac892 247 Pfam PF00455 DeoR C terminal sensor domain 75 227 9.2E-48 T 22-04-2016 IPR014036 DeoR C-terminal sensor domain SII_RS02490 9eae87a4ed99852ee44f94a8b8aac892 247 Gene3D G3DSA:3.40.50.1360 77 221 6.7E-14 T 22-04-2016 SII_RS02490 9eae87a4ed99852ee44f94a8b8aac892 247 SMART SM01134 73 230 6.5E-65 T 22-04-2016 SII_RS02490 9eae87a4ed99852ee44f94a8b8aac892 247 SUPERFAMILY SSF100950 74 227 1.42E-31 T 22-04-2016 SII_RS02490 9eae87a4ed99852ee44f94a8b8aac892 247 Gene3D G3DSA:1.10.10.10 3 47 2.6E-6 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SII_RS02490 9eae87a4ed99852ee44f94a8b8aac892 247 PANTHER PTHR30363:SF4 1 244 1.5E-89 T 22-04-2016 SII_RS02490 9eae87a4ed99852ee44f94a8b8aac892 247 SMART SM00420 6 58 2.9E-19 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 SII_RS02490 9eae87a4ed99852ee44f94a8b8aac892 247 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 4.5E-8 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 SII_RS02490 9eae87a4ed99852ee44f94a8b8aac892 247 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 4.5E-8 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 SII_RS02490 9eae87a4ed99852ee44f94a8b8aac892 247 Pfam PF08220 DeoR-like helix-turn-helix domain 6 60 9.8E-18 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 SII_RS02490 9eae87a4ed99852ee44f94a8b8aac892 247 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 22-04-2016 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 SII_RS04640 40ecdd4af9981b86e13153d34cf364c4 279 Gene3D G3DSA:3.30.572.10 5 279 7.9E-65 T 22-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 SII_RS04640 40ecdd4af9981b86e13153d34cf364c4 279 SUPERFAMILY SSF55831 3 278 8.11E-72 T 22-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 SII_RS04640 40ecdd4af9981b86e13153d34cf364c4 279 Pfam PF00303 Thymidylate synthase 8 279 5.5E-64 T 22-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 SII_RS04640 40ecdd4af9981b86e13153d34cf364c4 279 PRINTS PR00108 Thymidylate synthase family signature 54 75 1.4E-14 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 SII_RS04640 40ecdd4af9981b86e13153d34cf364c4 279 PRINTS PR00108 Thymidylate synthase family signature 209 226 1.4E-14 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 SII_RS04640 40ecdd4af9981b86e13153d34cf364c4 279 PRINTS PR00108 Thymidylate synthase family signature 171 197 1.4E-14 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 SII_RS04640 40ecdd4af9981b86e13153d34cf364c4 279 PRINTS PR00108 Thymidylate synthase family signature 122 141 1.4E-14 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 SII_RS04640 40ecdd4af9981b86e13153d34cf364c4 279 Hamap MF_00008 Thymidylate synthase [thyA]. 5 279 30.5 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 SII_RS04640 40ecdd4af9981b86e13153d34cf364c4 279 PANTHER PTHR11548:SF1 12 279 2.8E-127 T 22-04-2016 SII_RS04640 40ecdd4af9981b86e13153d34cf364c4 279 PANTHER PTHR11548 12 279 2.8E-127 T 22-04-2016 SII_RS04640 40ecdd4af9981b86e13153d34cf364c4 279 ProSitePatterns PS00091 Thymidylate synthase active site. 133 162 - T 22-04-2016 IPR020940 Thymidylate synthase, active site GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 SII_RS06995 bc93fd270109ade68b1a6e015f0ffa22 316 Gene3D G3DSA:1.10.150.170 117 221 4.5E-39 T 22-04-2016 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SII_RS06995 bc93fd270109ade68b1a6e015f0ffa22 316 SUPERFAMILY SSF53335 6 117 9.79E-45 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SII_RS06995 bc93fd270109ade68b1a6e015f0ffa22 316 SUPERFAMILY SSF53335 219 314 9.79E-45 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SII_RS06995 bc93fd270109ade68b1a6e015f0ffa22 316 Pfam PF01795 MraW methylase family 4 313 1.4E-132 T 22-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SII_RS06995 bc93fd270109ade68b1a6e015f0ffa22 316 PANTHER PTHR11265 1 316 2.0E-145 T 22-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SII_RS06995 bc93fd270109ade68b1a6e015f0ffa22 316 SUPERFAMILY SSF81799 118 219 9.94E-36 T 22-04-2016 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SII_RS06995 bc93fd270109ade68b1a6e015f0ffa22 316 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 2 313 2.2E-120 T 22-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SII_RS06995 bc93fd270109ade68b1a6e015f0ffa22 316 PANTHER PTHR11265:SF0 1 316 2.0E-145 T 22-04-2016 SII_RS06995 bc93fd270109ade68b1a6e015f0ffa22 316 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 7 314 37.362 T 22-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SII_RS06995 bc93fd270109ade68b1a6e015f0ffa22 316 Gene3D G3DSA:3.40.50.150 222 314 8.1E-50 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SII_RS06995 bc93fd270109ade68b1a6e015f0ffa22 316 Gene3D G3DSA:3.40.50.150 7 114 8.1E-50 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SII_RS06995 bc93fd270109ade68b1a6e015f0ffa22 316 PIRSF PIRSF004486 1 315 1.4E-108 T 22-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SII_RS04335 552ed16a3d6719f7b44037e15519ef85 397 SUPERFAMILY SSF103473 13 390 2.88E-36 T 22-04-2016 IPR020846 Major facilitator superfamily domain SII_RS04335 552ed16a3d6719f7b44037e15519ef85 397 Gene3D G3DSA:1.20.1250.20 207 383 1.6E-14 T 22-04-2016 SII_RS04335 552ed16a3d6719f7b44037e15519ef85 397 Gene3D G3DSA:1.20.1250.20 14 194 7.5E-17 T 22-04-2016 SII_RS04335 552ed16a3d6719f7b44037e15519ef85 397 PANTHER PTHR23530 1 389 6.4E-33 T 22-04-2016 SII_RS04335 552ed16a3d6719f7b44037e15519ef85 397 Pfam PF07690 Major Facilitator Superfamily 15 235 8.4E-15 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SII_RS04335 552ed16a3d6719f7b44037e15519ef85 397 Pfam PF07690 Major Facilitator Superfamily 241 383 8.3E-9 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SII_RS04335 552ed16a3d6719f7b44037e15519ef85 397 PANTHER PTHR23530:SF1 1 389 6.4E-33 T 22-04-2016 SII_RS06855 0609ece4042627ba4d874d2752011d3c 256 PANTHER PTHR24220 5 255 5.2E-128 T 22-04-2016 SII_RS06855 0609ece4042627ba4d874d2752011d3c 256 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SII_RS06855 0609ece4042627ba4d874d2752011d3c 256 TIGRFAM TIGR01978 sufC: FeS assembly ATPase SufC 4 243 2.0E-108 T 22-04-2016 IPR010230 FeS cluster assembly SUF system, ATPase SufC GO:0005524|GO:0006810 SII_RS06855 0609ece4042627ba4d874d2752011d3c 256 SMART SM00382 28 230 9.0E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain SII_RS06855 0609ece4042627ba4d874d2752011d3c 256 Gene3D G3DSA:3.40.50.300 3 242 1.0E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS06855 0609ece4042627ba4d874d2752011d3c 256 PANTHER PTHR24220:SF85 5 255 5.2E-128 T 22-04-2016 SII_RS06855 0609ece4042627ba4d874d2752011d3c 256 SUPERFAMILY SSF52540 3 231 2.19E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS06855 0609ece4042627ba4d874d2752011d3c 256 Pfam PF00005 ABC transporter 19 171 1.5E-22 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SII_RS05240 eababab97d30002a7adbf99024357e8d 355 SUPERFAMILY SSF56796 1 354 2.62E-105 T 22-04-2016 SII_RS05240 eababab97d30002a7adbf99024357e8d 355 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 1 355 38.142 T 22-04-2016 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 SII_RS05240 eababab97d30002a7adbf99024357e8d 355 PIRSF PIRSF001455 5 354 5.0E-104 T 22-04-2016 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 SII_RS05240 eababab97d30002a7adbf99024357e8d 355 Gene3D G3DSA:3.40.50.1970 2 172 3.1E-65 T 22-04-2016 SII_RS05240 eababab97d30002a7adbf99024357e8d 355 PANTHER PTHR21090 1 355 1.4E-140 T 22-04-2016 SII_RS05240 eababab97d30002a7adbf99024357e8d 355 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 12 349 4.4E-119 T 22-04-2016 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 SII_RS05240 eababab97d30002a7adbf99024357e8d 355 Gene3D G3DSA:1.20.1090.10 174 354 2.5E-52 T 22-04-2016 SII_RS05240 eababab97d30002a7adbf99024357e8d 355 Pfam PF01761 3-dehydroquinate synthase 69 323 1.5E-98 T 22-04-2016 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 SII_RS00005 596cf5081f801901520f01e976089a08 447 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 206 220 3.9E-48 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like SII_RS00005 596cf5081f801901520f01e976089a08 447 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 241 268 3.9E-48 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like SII_RS00005 596cf5081f801901520f01e976089a08 447 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 406 425 3.9E-48 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like SII_RS00005 596cf5081f801901520f01e976089a08 447 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 142 162 3.9E-48 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like SII_RS00005 596cf5081f801901520f01e976089a08 447 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 174 188 3.9E-48 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like SII_RS00005 596cf5081f801901520f01e976089a08 447 ProSitePatterns PS01008 DnaA protein signature. 406 425 - T 22-04-2016 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 SII_RS00005 596cf5081f801901520f01e976089a08 447 SMART SM00760 356 425 9.4E-39 T 22-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 SII_RS00005 596cf5081f801901520f01e976089a08 447 Gene3D G3DSA:1.10.8.60 276 343 4.4E-22 T 22-04-2016 SII_RS00005 596cf5081f801901520f01e976089a08 447 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 5 447 31.003 T 22-04-2016 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 SII_RS00005 596cf5081f801901520f01e976089a08 447 Pfam PF00308 Bacterial dnaA protein 109 326 4.8E-83 T 22-04-2016 IPR013317 Chromosomal replication initiator protein DnaA SII_RS00005 596cf5081f801901520f01e976089a08 447 SUPERFAMILY SSF48295 353 446 2.28E-34 T 22-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 SII_RS00005 596cf5081f801901520f01e976089a08 447 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 357 425 1.2E-29 T 22-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 SII_RS00005 596cf5081f801901520f01e976089a08 447 PANTHER PTHR30050:SF2 3 447 4.2E-181 T 22-04-2016 SII_RS00005 596cf5081f801901520f01e976089a08 447 Gene3D G3DSA:1.10.1750.10 352 446 2.0E-38 T 22-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 SII_RS00005 596cf5081f801901520f01e976089a08 447 SMART SM00382 141 273 5.9E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain SII_RS00005 596cf5081f801901520f01e976089a08 447 PANTHER PTHR30050 3 447 4.2E-181 T 22-04-2016 SII_RS00005 596cf5081f801901520f01e976089a08 447 Gene3D G3DSA:3.40.50.300 99 274 3.1E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS00005 596cf5081f801901520f01e976089a08 447 SUPERFAMILY SSF52540 109 321 3.81E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS00005 596cf5081f801901520f01e976089a08 447 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 8 446 4.3E-156 T 22-04-2016 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 SII_RS03885 b29420ca30126c9c2f599246c5ff1ead 428 Pfam PF00155 Aminotransferase class I and II 115 319 1.0E-11 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 SII_RS03885 b29420ca30126c9c2f599246c5ff1ead 428 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 73 4.4E-13 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SII_RS03885 b29420ca30126c9c2f599246c5ff1ead 428 SUPERFAMILY SSF46785 9 79 1.54E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SII_RS03885 b29420ca30126c9c2f599246c5ff1ead 428 Gene3D G3DSA:3.40.640.10 114 332 3.3E-49 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SII_RS03885 b29420ca30126c9c2f599246c5ff1ead 428 PANTHER PTHR11751 58 361 4.6E-54 T 22-04-2016 SII_RS03885 b29420ca30126c9c2f599246c5ff1ead 428 PANTHER PTHR11751:SF294 58 361 4.6E-54 T 22-04-2016 SII_RS03885 b29420ca30126c9c2f599246c5ff1ead 428 SUPERFAMILY SSF53383 110 361 1.5E-42 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SII_RS03885 b29420ca30126c9c2f599246c5ff1ead 428 SMART SM00345 14 73 5.5E-13 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SII_RS03885 b29420ca30126c9c2f599246c5ff1ead 428 Gene3D G3DSA:1.10.10.10 8 74 7.5E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SII_RS04415 e57480e0d5aa48b9869eb1fab953333c 425 SUPERFAMILY SSF52418 69 318 1.44E-85 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 SII_RS04415 e57480e0d5aa48b9869eb1fab953333c 425 TIGRFAM TIGR02644 Y_phosphoryl: pyrimidine-nucleoside phosphorylase 4 410 3.9E-169 T 22-04-2016 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic GO:0006213|GO:0016154 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181|UniPathway: UPA00578 SII_RS04415 e57480e0d5aa48b9869eb1fab953333c 425 PANTHER PTHR10515 1 424 3.0E-195 T 22-04-2016 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase GO:0004645|GO:0006206 SII_RS04415 e57480e0d5aa48b9869eb1fab953333c 425 Gene3D G3DSA:3.90.1170.30 325 414 2.1E-28 T 22-04-2016 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 SII_RS04415 e57480e0d5aa48b9869eb1fab953333c 425 SUPERFAMILY SSF54680 325 421 2.62E-24 T 22-04-2016 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 SII_RS04415 e57480e0d5aa48b9869eb1fab953333c 425 Pfam PF02885 Glycosyl transferase family, helical bundle domain 4 64 1.4E-22 T 22-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain SII_RS04415 e57480e0d5aa48b9869eb1fab953333c 425 SUPERFAMILY SSF47648 1 69 2.35E-22 T 22-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain SII_RS04415 e57480e0d5aa48b9869eb1fab953333c 425 ProSitePatterns PS00647 Thymidine and pyrimidine-nucleoside phosphorylases signature. 110 125 - T 22-04-2016 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site GO:0006206 SII_RS04415 e57480e0d5aa48b9869eb1fab953333c 425 PIRSF PIRSF000478 1 425 5.0E-157 T 22-04-2016 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase GO:0004645|GO:0006206 SII_RS04415 e57480e0d5aa48b9869eb1fab953333c 425 SMART SM00941 338 411 1.1E-25 T 22-04-2016 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 SII_RS04415 e57480e0d5aa48b9869eb1fab953333c 425 Gene3D G3DSA:1.20.970.10 1 67 4.3E-31 T 22-04-2016 SII_RS04415 e57480e0d5aa48b9869eb1fab953333c 425 PANTHER PTHR10515:SF0 1 424 3.0E-195 T 22-04-2016 SII_RS04415 e57480e0d5aa48b9869eb1fab953333c 425 Pfam PF00591 Glycosyl transferase family, a/b domain 78 301 3.5E-38 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 SII_RS04415 e57480e0d5aa48b9869eb1fab953333c 425 Gene3D G3DSA:3.40.1030.10 70 321 1.4E-110 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 SII_RS04415 e57480e0d5aa48b9869eb1fab953333c 425 Pfam PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain 338 411 6.2E-23 T 22-04-2016 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 SII_RS02455 015283024b438b66f444357532214a18 170 PANTHER PTHR11776:SF0 1 170 5.2E-77 T 22-04-2016 SII_RS02455 015283024b438b66f444357532214a18 170 Pfam PF00156 Phosphoribosyl transferase domain 36 166 1.7E-18 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 SII_RS02455 015283024b438b66f444357532214a18 170 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 3 170 38.044 T 22-04-2016 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|UniPathway: UPA00588 SII_RS02455 015283024b438b66f444357532214a18 170 PANTHER PTHR11776 1 170 5.2E-77 T 22-04-2016 SII_RS02455 015283024b438b66f444357532214a18 170 Gene3D G3DSA:3.40.50.2020 2 168 4.4E-66 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like SII_RS02455 015283024b438b66f444357532214a18 170 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 3 170 3.0E-68 T 22-04-2016 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|UniPathway: UPA00588 SII_RS02455 015283024b438b66f444357532214a18 170 SUPERFAMILY SSF53271 2 167 1.21E-50 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like SII_RS07935 b8fc1dfa8e6085459b740f80db9d631e 289 PANTHER PTHR33434 1 289 1.3E-79 T 22-04-2016 SII_RS07935 b8fc1dfa8e6085459b740f80db9d631e 289 Gene3D G3DSA:3.40.50.10170 1 154 4.9E-44 T 22-04-2016 SII_RS07935 b8fc1dfa8e6085459b740f80db9d631e 289 PANTHER PTHR33434:SF3 1 289 1.3E-79 T 22-04-2016 SII_RS07935 b8fc1dfa8e6085459b740f80db9d631e 289 SUPERFAMILY SSF82549 1 283 2.17E-79 T 22-04-2016 SII_RS07935 b8fc1dfa8e6085459b740f80db9d631e 289 Pfam PF02645 Uncharacterised protein, DegV family COG1307 3 284 9.5E-81 T 22-04-2016 IPR003797 DegV SII_RS07935 b8fc1dfa8e6085459b740f80db9d631e 289 Gene3D G3DSA:3.30.1180.10 158 284 6.6E-40 T 22-04-2016 SII_RS07935 b8fc1dfa8e6085459b740f80db9d631e 289 TIGRFAM TIGR00762 DegV: EDD domain protein, DegV family 3 282 2.5E-86 T 22-04-2016 IPR003797 DegV SII_RS08740 9c7dcb6268a5743c39b7d5a90a9d8268 122 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 122 1.4E-56 T 22-04-2016 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 SII_RS08740 9c7dcb6268a5743c39b7d5a90a9d8268 122 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 22-04-2016 IPR019972 Ribosomal protein L14P, conserved site SII_RS08740 9c7dcb6268a5743c39b7d5a90a9d8268 122 SUPERFAMILY SSF50193 1 122 4.71E-50 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 SII_RS08740 9c7dcb6268a5743c39b7d5a90a9d8268 122 Pfam PF00238 Ribosomal protein L14p/L23e 1 122 8.1E-54 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 SII_RS08740 9c7dcb6268a5743c39b7d5a90a9d8268 122 SMART SM01374 1 122 1.1E-84 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 SII_RS08740 9c7dcb6268a5743c39b7d5a90a9d8268 122 PANTHER PTHR11761 1 122 3.2E-72 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 SII_RS08740 9c7dcb6268a5743c39b7d5a90a9d8268 122 Gene3D G3DSA:2.40.150.20 1 122 1.5E-52 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 SII_RS08740 9c7dcb6268a5743c39b7d5a90a9d8268 122 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 122 26.452 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 SII_RS05495 8b560ebec4f3b327143b66734ad5ff41 430 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 377 419 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 SII_RS05495 8b560ebec4f3b327143b66734ad5ff41 430 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 407 423 7.5E-5 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 SII_RS05495 8b560ebec4f3b327143b66734ad5ff41 430 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 392 407 7.5E-5 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 SII_RS05495 8b560ebec4f3b327143b66734ad5ff41 430 Gene3D G3DSA:1.10.10.60 322 376 7.4E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SII_RS05495 8b560ebec4f3b327143b66734ad5ff41 430 SMART SM00342 340 423 4.1E-24 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SII_RS05495 8b560ebec4f3b327143b66734ad5ff41 430 Gene3D G3DSA:3.40.50.2300 1 125 1.6E-32 T 22-04-2016 SII_RS05495 8b560ebec4f3b327143b66734ad5ff41 430 Pfam PF00072 Response regulator receiver domain 4 116 7.0E-25 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SII_RS05495 8b560ebec4f3b327143b66734ad5ff41 430 SUPERFAMILY SSF52172 1 127 1.17E-32 T 22-04-2016 IPR011006 CheY-like superfamily SII_RS05495 8b560ebec4f3b327143b66734ad5ff41 430 SUPERFAMILY SSF46689 377 425 6.72E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SII_RS05495 8b560ebec4f3b327143b66734ad5ff41 430 PANTHER PTHR26402:SF509 382 393 2.9E-38 T 22-04-2016 SII_RS05495 8b560ebec4f3b327143b66734ad5ff41 430 PANTHER PTHR26402:SF509 2 133 2.9E-38 T 22-04-2016 SII_RS05495 8b560ebec4f3b327143b66734ad5ff41 430 PANTHER PTHR26402 382 393 2.9E-38 T 22-04-2016 SII_RS05495 8b560ebec4f3b327143b66734ad5ff41 430 PANTHER PTHR26402 2 133 2.9E-38 T 22-04-2016 SII_RS05495 8b560ebec4f3b327143b66734ad5ff41 430 Pfam PF12833 Helix-turn-helix domain 347 425 1.0E-18 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SII_RS05495 8b560ebec4f3b327143b66734ad5ff41 430 Gene3D G3DSA:1.10.10.60 377 426 3.4E-16 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SII_RS05495 8b560ebec4f3b327143b66734ad5ff41 430 SMART SM00448 2 116 4.8E-29 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SII_RS03865 61ace266e69592766cb4fe9d84ece5ff 210 Gene3D G3DSA:3.20.20.380 1 209 8.2E-75 T 22-04-2016 IPR023648 Copper homeostasis CutC domain GO:0005507|GO:0055070 SII_RS03865 61ace266e69592766cb4fe9d84ece5ff 210 SUPERFAMILY SSF110395 1 210 8.63E-59 T 22-04-2016 IPR023648 Copper homeostasis CutC domain GO:0005507|GO:0055070 SII_RS03865 61ace266e69592766cb4fe9d84ece5ff 210 PANTHER PTHR12598:SF0 1 206 1.3E-71 T 22-04-2016 SII_RS03865 61ace266e69592766cb4fe9d84ece5ff 210 Pfam PF03932 CutC family 1 208 3.2E-71 T 22-04-2016 IPR005627 Copper homeostasis protein CutC GO:0005507|GO:0055070 SII_RS03865 61ace266e69592766cb4fe9d84ece5ff 210 PANTHER PTHR12598 1 206 1.3E-71 T 22-04-2016 IPR005627 Copper homeostasis protein CutC GO:0005507|GO:0055070 SII_RS06925 ff722c914fac0562ea6a060fa4820912 121 PANTHER PTHR34297:SF2 1 121 8.8E-49 T 22-04-2016 SII_RS06925 ff722c914fac0562ea6a060fa4820912 121 PANTHER PTHR34297 1 121 8.8E-49 T 22-04-2016 SII_RS06925 ff722c914fac0562ea6a060fa4820912 121 Pfam PF03780 Asp23 family, cell envelope-related function 9 117 9.8E-34 T 22-04-2016 IPR005531 Alkaline shock protein Asp23 SII_RS03000 4219737d6dd10de4f62492ca276173d4 370 TIGRFAM TIGR00045 TIGR00045: glycerate kinase 3 368 2.0E-128 T 22-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 SII_RS03000 4219737d6dd10de4f62492ca276173d4 370 Gene3D G3DSA:3.90.1510.10 43 269 6.2E-69 T 22-04-2016 IPR018193 Glycerate kinase, flavodoxin-like domain GO:0008887|GO:0031388 SII_RS03000 4219737d6dd10de4f62492ca276173d4 370 PANTHER PTHR21599:SF0 1 368 5.6E-126 T 22-04-2016 SII_RS03000 4219737d6dd10de4f62492ca276173d4 370 SUPERFAMILY SSF110738 1 368 6.28E-116 T 22-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 SII_RS03000 4219737d6dd10de4f62492ca276173d4 370 PANTHER PTHR21599 1 368 5.6E-126 T 22-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 SII_RS03000 4219737d6dd10de4f62492ca276173d4 370 PIRSF PIRSF006078 1 369 1.5E-114 T 22-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 SII_RS03000 4219737d6dd10de4f62492ca276173d4 370 Pfam PF02595 Glycerate kinase family 3 366 4.8E-118 T 22-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 SII_RS06565 d59242532381b2cd4984d07b534dc767 211 SUPERFAMILY SSF54211 4 128 5.31E-43 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SII_RS06565 d59242532381b2cd4984d07b534dc767 211 TIGRFAM TIGR00257 IMPACT_YIGZ: uncharacterized protein, YigZ family 3 197 3.2E-63 T 22-04-2016 IPR015796 Impact family, bacterial/archaeal SII_RS06565 d59242532381b2cd4984d07b534dc767 211 PANTHER PTHR16301 3 202 4.4E-64 T 22-04-2016 IPR023582 Impact family SII_RS06565 d59242532381b2cd4984d07b534dc767 211 Gene3D G3DSA:3.30.230.30 3 129 3.5E-49 T 22-04-2016 IPR001498 Impact, N-terminal SII_RS06565 d59242532381b2cd4984d07b534dc767 211 SUPERFAMILY SSF54980 136 197 2.66E-7 T 22-04-2016 IPR009022 Elongation factor G, III-V domain SII_RS06565 d59242532381b2cd4984d07b534dc767 211 Gene3D G3DSA:3.30.70.240 136 200 3.3E-6 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain SII_RS06565 d59242532381b2cd4984d07b534dc767 211 Pfam PF09186 Domain of unknown function (DUF1949) 138 193 6.7E-12 T 22-04-2016 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal SII_RS06565 d59242532381b2cd4984d07b534dc767 211 Pfam PF01205 Uncharacterized protein family UPF0029 17 121 1.4E-32 T 22-04-2016 IPR001498 Impact, N-terminal SII_RS06565 d59242532381b2cd4984d07b534dc767 211 ProSitePatterns PS00910 Uncharacterized protein family UPF0029 signature. 77 106 - T 22-04-2016 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site SII_RS05400 3034858159a200892cf1dd8f7d0d7f4b 719 TIGRFAM TIGR04170 RNR_1b_NrdE: ribonucleoside-diphosphate reductase, class 1b, alpha subunit 10 719 0.0 T 22-04-2016 IPR026459 Ribonucleotide reductase, class 1b, subunit NrdE KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 SII_RS05400 3034858159a200892cf1dd8f7d0d7f4b 719 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 558 580 - T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SII_RS05400 3034858159a200892cf1dd8f7d0d7f4b 719 SUPERFAMILY SSF48168 22 168 3.14E-41 T 22-04-2016 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 SII_RS05400 3034858159a200892cf1dd8f7d0d7f4b 719 SUPERFAMILY SSF51998 169 701 1.07E-167 T 22-04-2016 SII_RS05400 3034858159a200892cf1dd8f7d0d7f4b 719 PANTHER PTHR11573 7 701 6.0E-225 T 22-04-2016 SII_RS05400 3034858159a200892cf1dd8f7d0d7f4b 719 PRINTS PR01183 Ribonucleotide reductase large chain signature 487 510 2.2E-21 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SII_RS05400 3034858159a200892cf1dd8f7d0d7f4b 719 PRINTS PR01183 Ribonucleotide reductase large chain signature 569 596 2.2E-21 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SII_RS05400 3034858159a200892cf1dd8f7d0d7f4b 719 PRINTS PR01183 Ribonucleotide reductase large chain signature 459 481 2.2E-21 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SII_RS05400 3034858159a200892cf1dd8f7d0d7f4b 719 PRINTS PR01183 Ribonucleotide reductase large chain signature 245 264 2.2E-21 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SII_RS05400 3034858159a200892cf1dd8f7d0d7f4b 719 PRINTS PR01183 Ribonucleotide reductase large chain signature 376 387 2.2E-21 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SII_RS05400 3034858159a200892cf1dd8f7d0d7f4b 719 Pfam PF08343 Ribonucleotide reductase N-terminal 11 91 3.0E-26 T 22-04-2016 IPR013554 Ribonucleotide reductase N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 SII_RS05400 3034858159a200892cf1dd8f7d0d7f4b 719 Pfam PF02867 Ribonucleotide reductase, barrel domain 170 698 5.7E-139 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SII_RS05400 3034858159a200892cf1dd8f7d0d7f4b 719 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 95 165 2.1E-10 T 22-04-2016 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 SII_RS05400 3034858159a200892cf1dd8f7d0d7f4b 719 Gene3D G3DSA:3.20.70.20 569 669 3.6E-56 T 22-04-2016 SII_RS05400 3034858159a200892cf1dd8f7d0d7f4b 719 Gene3D G3DSA:3.20.70.20 344 507 3.6E-56 T 22-04-2016 SII_RS05400 3034858159a200892cf1dd8f7d0d7f4b 719 Gene3D G3DSA:3.20.70.20 79 291 3.6E-56 T 22-04-2016 SII_RS05400 3034858159a200892cf1dd8f7d0d7f4b 719 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 96 701 1.0E-148 T 22-04-2016 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 SII_RS05430 77b69c9175ad2576a7244eadd51904f5 213 Pfam PF01965 DJ-1/PfpI family 1 160 2.9E-20 T 22-04-2016 IPR002818 DJ-1/PfpI SII_RS05430 77b69c9175ad2576a7244eadd51904f5 213 Gene3D G3DSA:3.40.50.880 1 169 1.1E-23 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like SII_RS05430 77b69c9175ad2576a7244eadd51904f5 213 SUPERFAMILY SSF52317 1 168 3.55E-24 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like SII_RS05370 5c5564ef65016c4f25778e540dc14ee5 466 PANTHER PTHR11014 259 466 2.4E-56 T 22-04-2016 SII_RS05370 5c5564ef65016c4f25778e540dc14ee5 466 PANTHER PTHR11014 1 192 2.4E-56 T 22-04-2016 SII_RS05370 5c5564ef65016c4f25778e540dc14ee5 466 Gene3D G3DSA:3.30.70.360 206 283 8.4E-28 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain SII_RS05370 5c5564ef65016c4f25778e540dc14ee5 466 Gene3D G3DSA:3.30.70.360 284 380 1.3E-36 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain SII_RS05370 5c5564ef65016c4f25778e540dc14ee5 466 Gene3D G3DSA:3.40.630.10 4 188 2.2E-68 T 22-04-2016 SII_RS05370 5c5564ef65016c4f25778e540dc14ee5 466 Gene3D G3DSA:3.40.630.10 382 465 2.2E-68 T 22-04-2016 SII_RS05370 5c5564ef65016c4f25778e540dc14ee5 466 TIGRFAM TIGR01886 dipeptidase: dipeptidase PepV 2 466 1.9E-220 T 22-04-2016 IPR011291 Peptidase M20A, peptidase V KEGG: 00480+3.4.13.- SII_RS05370 5c5564ef65016c4f25778e540dc14ee5 466 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 82 91 - T 22-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 SII_RS05370 5c5564ef65016c4f25778e540dc14ee5 466 SUPERFAMILY SSF55031 188 368 4.09E-47 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain SII_RS05370 5c5564ef65016c4f25778e540dc14ee5 466 TIGRFAM TIGR01887 dipeptidaselike: putative dipeptidase 14 461 2.0E-172 T 22-04-2016 IPR010964 Peptidase M20A, peptidase V-related GO:0008270|GO:0016805 KEGG: 00480+3.4.13.- SII_RS05370 5c5564ef65016c4f25778e540dc14ee5 466 Pfam PF01546 Peptidase family M20/M25/M40 86 462 1.9E-31 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 SII_RS05370 5c5564ef65016c4f25778e540dc14ee5 466 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 116 155 - T 22-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 SII_RS05370 5c5564ef65016c4f25778e540dc14ee5 466 SUPERFAMILY SSF53187 2 188 6.01E-67 T 22-04-2016 SII_RS05370 5c5564ef65016c4f25778e540dc14ee5 466 SUPERFAMILY SSF53187 383 465 6.01E-67 T 22-04-2016 SII_RS08220 1b6c3cb5969471564a0474f800ff4216 328 Gene3D G3DSA:3.40.50.2300 40 162 2.8E-31 T 22-04-2016 SII_RS08220 1b6c3cb5969471564a0474f800ff4216 328 SUPERFAMILY SSF53822 43 323 5.3E-61 T 22-04-2016 IPR028082 Periplasmic binding protein-like I SII_RS08220 1b6c3cb5969471564a0474f800ff4216 328 Gene3D G3DSA:3.40.50.2300 163 322 3.4E-36 T 22-04-2016 SII_RS08220 1b6c3cb5969471564a0474f800ff4216 328 PANTHER PTHR30036 5 328 9.6E-40 T 22-04-2016 SII_RS08220 1b6c3cb5969471564a0474f800ff4216 328 Pfam PF13407 Periplasmic binding protein domain 49 299 3.6E-42 T 22-04-2016 IPR025997 Periplasmic binding protein SII_RS00990 76484a4c9afe799ed1bcf9097f8e3116 314 Pfam PF01966 HD domain 163 278 6.1E-7 T 22-04-2016 IPR006674 HD domain SII_RS00990 76484a4c9afe799ed1bcf9097f8e3116 314 SUPERFAMILY SSF109604 148 281 4.89E-9 T 22-04-2016 SII_RS00990 76484a4c9afe799ed1bcf9097f8e3116 314 PANTHER PTHR37294:SF1 1 314 8.0E-119 T 22-04-2016 SII_RS00990 76484a4c9afe799ed1bcf9097f8e3116 314 PANTHER PTHR37294 1 314 8.0E-119 T 22-04-2016 SII_RS00990 76484a4c9afe799ed1bcf9097f8e3116 314 Gene3D G3DSA:2.40.50.140 18 82 3.0E-5 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SII_RS00990 76484a4c9afe799ed1bcf9097f8e3116 314 Gene3D G3DSA:1.10.3210.10 159 278 9.2E-5 T 22-04-2016 IPR006674 HD domain SII_RS09025 d47af503fc21e43027e31f4b02f76fc4 169 Pfam PF06271 RDD family 11 162 5.6E-15 T 22-04-2016 IPR010432 RDD SII_RS03600 78ac53d3da29e794f3a3c7730c38a601 312 TIGRFAM TIGR01037 pyrD_sub1_fam: dihydroorotate dehydrogenase family protein 6 302 4.6E-104 T 22-04-2016 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 SII_RS03600 78ac53d3da29e794f3a3c7730c38a601 312 PANTHER PTHR11938 5 304 3.9E-67 T 22-04-2016 SII_RS03600 78ac53d3da29e794f3a3c7730c38a601 312 Hamap MF_00224 Dihydroorotate dehydrogenase [pyrD]. 6 307 38.331 T 22-04-2016 IPR024920 Dihydroorotate dehydrogenase, class 1 GO:0004152|GO:0005737|GO:0006221 SII_RS03600 78ac53d3da29e794f3a3c7730c38a601 312 PANTHER PTHR11938:SF5 5 304 3.9E-67 T 22-04-2016 SII_RS03600 78ac53d3da29e794f3a3c7730c38a601 312 PIRSF PIRSF000164 1 305 3.0E-74 T 22-04-2016 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 Reactome: REACT_1698 SII_RS03600 78ac53d3da29e794f3a3c7730c38a601 312 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 245 265 - T 22-04-2016 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 SII_RS03600 78ac53d3da29e794f3a3c7730c38a601 312 Pfam PF01180 Dihydroorotate dehydrogenase 6 292 1.2E-84 T 22-04-2016 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 SII_RS03600 78ac53d3da29e794f3a3c7730c38a601 312 Gene3D G3DSA:3.20.20.70 3 304 2.4E-88 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SII_RS03600 78ac53d3da29e794f3a3c7730c38a601 312 SUPERFAMILY SSF51395 3 304 4.58E-79 T 22-04-2016 SII_RS03600 78ac53d3da29e794f3a3c7730c38a601 312 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 42 61 - T 22-04-2016 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 SII_RS06940 f6ea139523b88c8d2643d5d7d95019bb 148 Pfam PF04397 LytTr DNA-binding domain 51 144 3.9E-22 T 22-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 SII_RS06940 f6ea139523b88c8d2643d5d7d95019bb 148 SMART SM00850 48 145 4.4E-26 T 22-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 SII_RS06940 f6ea139523b88c8d2643d5d7d95019bb 148 Gene3D G3DSA:2.40.50.40 40 106 1.1E-15 T 22-04-2016 SII_RS06940 f6ea139523b88c8d2643d5d7d95019bb 148 PANTHER PTHR37299 1 148 2.2E-38 T 22-04-2016 SII_RS04365 e1423055a797f5f5c6142cf7a5272021 183 PANTHER PTHR30543 1 183 1.5E-43 T 22-04-2016 SII_RS04365 e1423055a797f5f5c6142cf7a5272021 183 PANTHER PTHR30543:SF6 1 183 1.5E-43 T 22-04-2016 SII_RS04365 e1423055a797f5f5c6142cf7a5272021 183 Gene3D G3DSA:3.40.50.360 3 182 2.4E-43 T 22-04-2016 IPR029039 Flavoprotein-like domain SII_RS04365 e1423055a797f5f5c6142cf7a5272021 183 Pfam PF03358 NADPH-dependent FMN reductase 4 145 1.4E-27 T 22-04-2016 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 SII_RS04365 e1423055a797f5f5c6142cf7a5272021 183 SUPERFAMILY SSF52218 3 177 1.2E-35 T 22-04-2016 IPR029039 Flavoprotein-like domain SII_RS07470 27b3596886fbd0cb2d7403104401795a 839 Gene3D G3DSA:3.40.50.300 350 397 4.6E-112 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS07470 27b3596886fbd0cb2d7403104401795a 839 Gene3D G3DSA:3.40.50.300 10 226 4.6E-112 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS07470 27b3596886fbd0cb2d7403104401795a 839 SMART SM00958 227 339 1.7E-57 T 22-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 SII_RS07470 27b3596886fbd0cb2d7403104401795a 839 PANTHER PTHR30612 1 839 0.0 T 22-04-2016 SII_RS07470 27b3596886fbd0cb2d7403104401795a 839 SUPERFAMILY SSF81886 573 827 3.66E-71 T 22-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 SII_RS07470 27b3596886fbd0cb2d7403104401795a 839 SUPERFAMILY SSF52540 349 396 3.65E-75 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS07470 27b3596886fbd0cb2d7403104401795a 839 SUPERFAMILY SSF52540 12 226 3.65E-75 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS07470 27b3596886fbd0cb2d7403104401795a 839 Pfam PF07517 SecA DEAD-like domain 10 383 1.1E-123 T 22-04-2016 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 SII_RS07470 27b3596886fbd0cb2d7403104401795a 839 Gene3D G3DSA:3.40.50.300 398 569 2.2E-78 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS07470 27b3596886fbd0cb2d7403104401795a 839 Pfam PF02810 SEC-C motif 819 837 4.2E-10 T 22-04-2016 IPR004027 SEC-C motif SII_RS07470 27b3596886fbd0cb2d7403104401795a 839 Pfam PF07516 SecA Wing and Scaffold domain 571 779 1.6E-56 T 22-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 SII_RS07470 27b3596886fbd0cb2d7403104401795a 839 Pfam PF01043 SecA preprotein cross-linking domain 231 339 7.3E-35 T 22-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 SII_RS07470 27b3596886fbd0cb2d7403104401795a 839 PRINTS PR00906 SecA protein signature 320 342 1.8E-68 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 SII_RS07470 27b3596886fbd0cb2d7403104401795a 839 PRINTS PR00906 SecA protein signature 168 188 1.8E-68 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 SII_RS07470 27b3596886fbd0cb2d7403104401795a 839 PRINTS PR00906 SecA protein signature 99 113 1.8E-68 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 SII_RS07470 27b3596886fbd0cb2d7403104401795a 839 PRINTS PR00906 SecA protein signature 115 125 1.8E-68 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 SII_RS07470 27b3596886fbd0cb2d7403104401795a 839 PRINTS PR00906 SecA protein signature 357 374 1.8E-68 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 SII_RS07470 27b3596886fbd0cb2d7403104401795a 839 PRINTS PR00906 SecA protein signature 61 85 1.8E-68 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 SII_RS07470 27b3596886fbd0cb2d7403104401795a 839 PRINTS PR00906 SecA protein signature 394 407 1.8E-68 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 SII_RS07470 27b3596886fbd0cb2d7403104401795a 839 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 26 497 1.8E-226 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 SII_RS07470 27b3596886fbd0cb2d7403104401795a 839 ProSitePatterns PS01312 SecA family signature. 481 496 - T 22-04-2016 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 SII_RS07470 27b3596886fbd0cb2d7403104401795a 839 Gene3D G3DSA:1.10.3060.10 601 781 1.8E-47 T 22-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 SII_RS07470 27b3596886fbd0cb2d7403104401795a 839 SMART SM00957 5 383 6.2E-266 T 22-04-2016 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 SII_RS07470 27b3596886fbd0cb2d7403104401795a 839 Gene3D G3DSA:3.90.1440.10 230 349 5.4E-43 T 22-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 SII_RS07470 27b3596886fbd0cb2d7403104401795a 839 SUPERFAMILY SSF52540 397 568 5.14E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS07470 27b3596886fbd0cb2d7403104401795a 839 Hamap MF_01382 Protein translocase subunit SecA [secA]. 3 782 19.169 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 SII_RS07470 27b3596886fbd0cb2d7403104401795a 839 SUPERFAMILY SSF81767 230 349 1.96E-41 T 22-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 SII_RS03910 8d703093c09f123451022a2e101a7ffa 258 SUPERFAMILY SSF53098 60 255 3.03E-68 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SII_RS03910 8d703093c09f123451022a2e101a7ffa 258 Gene3D G3DSA:3.30.420.10 71 209 9.0E-47 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SII_RS03910 8d703093c09f123451022a2e101a7ffa 258 Hamap MF_00052_B Ribonuclease HII [rnhB]. 71 249 35.448 T 22-04-2016 IPR022898 Ribonuclease HII GO:0004523 SII_RS03910 8d703093c09f123451022a2e101a7ffa 258 PANTHER PTHR10954:SF7 2 258 1.2E-103 T 22-04-2016 SII_RS03910 8d703093c09f123451022a2e101a7ffa 258 PANTHER PTHR10954 2 258 1.2E-103 T 22-04-2016 IPR001352 Ribonuclease HII/HIII GO:0003723|GO:0004523 SII_RS03910 8d703093c09f123451022a2e101a7ffa 258 Pfam PF01351 Ribonuclease HII 73 247 4.1E-37 T 22-04-2016 IPR024567 Ribonuclease HII/HIII domain SII_RS08960 e2218be1eaf7fe5a0429e4213993d09c 413 PANTHER PTHR11136 1 411 9.1E-109 T 22-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 SII_RS08960 e2218be1eaf7fe5a0429e4213993d09c 413 PIRSF PIRSF001563 1 413 1.4E-115 T 22-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 SII_RS08960 e2218be1eaf7fe5a0429e4213993d09c 413 SUPERFAMILY SSF53244 284 407 1.45E-18 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SII_RS08960 e2218be1eaf7fe5a0429e4213993d09c 413 PANTHER PTHR11136:SF0 1 411 9.1E-109 T 22-04-2016 SII_RS08960 e2218be1eaf7fe5a0429e4213993d09c 413 SUPERFAMILY SSF53623 3 284 2.75E-80 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SII_RS08960 e2218be1eaf7fe5a0429e4213993d09c 413 TIGRFAM TIGR01499 folC: bifunctional protein FolC 20 406 4.8E-113 T 22-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 SII_RS08960 e2218be1eaf7fe5a0429e4213993d09c 413 Pfam PF08245 Mur ligase middle domain 42 256 1.9E-11 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SII_RS08960 e2218be1eaf7fe5a0429e4213993d09c 413 Gene3D G3DSA:3.40.1190.10 2 284 4.2E-83 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SII_RS08960 e2218be1eaf7fe5a0429e4213993d09c 413 ProSitePatterns PS01012 Folylpolyglutamate synthase signature 2. 137 152 - T 22-04-2016 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 SII_RS08960 e2218be1eaf7fe5a0429e4213993d09c 413 Gene3D G3DSA:3.90.190.20 286 409 2.5E-20 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SII_RS08935 3f84fd6787229cba7000ee180fc2173e 167 Gene3D G3DSA:3.40.630.30 2 157 1.7E-22 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SII_RS08935 3f84fd6787229cba7000ee180fc2173e 167 Pfam PF13302 Acetyltransferase (GNAT) domain 2 147 1.9E-12 T 22-04-2016 IPR000182 GNAT domain GO:0008080 SII_RS08935 3f84fd6787229cba7000ee180fc2173e 167 PANTHER PTHR39173 1 165 3.9E-45 T 22-04-2016 SII_RS08935 3f84fd6787229cba7000ee180fc2173e 167 SUPERFAMILY SSF55729 1 156 6.2E-24 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SII_RS06530 2548d713a77691f5eaa6c8a5787f8915 187 PANTHER PTHR41319 2 176 9.5E-55 T 22-04-2016 SII_RS06530 2548d713a77691f5eaa6c8a5787f8915 187 PIRSF PIRSF012565 1 187 1.4E-62 T 22-04-2016 IPR009370 Protein of unknown function DUF1027 SII_RS06530 2548d713a77691f5eaa6c8a5787f8915 187 PANTHER PTHR41319:SF1 2 176 9.5E-55 T 22-04-2016 SII_RS06530 2548d713a77691f5eaa6c8a5787f8915 187 Pfam PF06265 Protein of unknown function (DUF1027) 30 111 1.3E-34 T 22-04-2016 IPR009370 Protein of unknown function DUF1027 SII_RS08035 8eac6784e18d57235b87fb34843fc51d 616 Gene3D G3DSA:3.20.20.370 299 435 3.0E-5 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 SII_RS08035 8eac6784e18d57235b87fb34843fc51d 616 SUPERFAMILY SSF88713 300 435 1.65E-6 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 SII_RS08035 8eac6784e18d57235b87fb34843fc51d 616 Pfam PF09960 Uncharacterised protein conserved in bacteria (DUF2194) 26 189 2.3E-28 T 22-04-2016 IPR018695 Protein of unknown function DUF2194 SII_RS08035 8eac6784e18d57235b87fb34843fc51d 616 Pfam PF09960 Uncharacterised protein conserved in bacteria (DUF2194) 212 603 5.5E-150 T 22-04-2016 IPR018695 Protein of unknown function DUF2194 SII_RS01780 8aa1ea4db1028ce35ec25799ff46c664 165 Pfam PF13673 Acetyltransferase (GNAT) domain 21 161 3.9E-11 T 22-04-2016 IPR000182 GNAT domain GO:0008080 SII_RS01780 8aa1ea4db1028ce35ec25799ff46c664 165 Gene3D G3DSA:3.40.630.30 1 161 1.3E-36 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SII_RS01780 8aa1ea4db1028ce35ec25799ff46c664 165 PANTHER PTHR10908 3 161 2.0E-22 T 22-04-2016 SII_RS01780 8aa1ea4db1028ce35ec25799ff46c664 165 SUPERFAMILY SSF55729 1 160 2.62E-23 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SII_RS08210 45325558fe01621e5f37e0e0d24d1d2f 227 SUPERFAMILY SSF52172 1 133 3.27E-37 T 22-04-2016 IPR011006 CheY-like superfamily SII_RS08210 45325558fe01621e5f37e0e0d24d1d2f 227 PANTHER PTHR26402 2 215 6.7E-75 T 22-04-2016 SII_RS08210 45325558fe01621e5f37e0e0d24d1d2f 227 PANTHER PTHR26402:SF151 2 215 6.7E-75 T 22-04-2016 SII_RS08210 45325558fe01621e5f37e0e0d24d1d2f 227 Pfam PF00072 Response regulator receiver domain 4 116 5.7E-28 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SII_RS08210 45325558fe01621e5f37e0e0d24d1d2f 227 Gene3D G3DSA:3.40.50.2300 1 120 6.4E-39 T 22-04-2016 SII_RS08210 45325558fe01621e5f37e0e0d24d1d2f 227 Pfam PF00196 Bacterial regulatory proteins, luxR family 157 211 3.5E-14 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SII_RS08210 45325558fe01621e5f37e0e0d24d1d2f 227 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 187 199 3.3E-9 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SII_RS08210 45325558fe01621e5f37e0e0d24d1d2f 227 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 171 187 3.3E-9 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SII_RS08210 45325558fe01621e5f37e0e0d24d1d2f 227 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 157 171 3.3E-9 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SII_RS08210 45325558fe01621e5f37e0e0d24d1d2f 227 SMART SM00448 2 115 3.8E-31 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SII_RS08210 45325558fe01621e5f37e0e0d24d1d2f 227 SUPERFAMILY SSF46894 139 216 1.33E-17 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SII_RS08210 45325558fe01621e5f37e0e0d24d1d2f 227 SMART SM00421 154 211 1.7E-16 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SII_RS08210 45325558fe01621e5f37e0e0d24d1d2f 227 Gene3D G3DSA:1.10.10.10 121 217 5.6E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SII_RS00440 92748e6afe8bf6ddc2c55d24b1898b51 883 SUPERFAMILY SSF53720 337 469 1.83E-79 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 SII_RS00440 92748e6afe8bf6ddc2c55d24b1898b51 883 SUPERFAMILY SSF53720 18 308 1.83E-79 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 SII_RS00440 92748e6afe8bf6ddc2c55d24b1898b51 883 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 733 753 - T 22-04-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 SII_RS00440 92748e6afe8bf6ddc2c55d24b1898b51 883 PANTHER PTHR11496:SF79 380 877 1.0E-300 T 22-04-2016 SII_RS00440 92748e6afe8bf6ddc2c55d24b1898b51 883 Gene3D G3DSA:3.40.309.10 237 284 1.2E-29 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 SII_RS00440 92748e6afe8bf6ddc2c55d24b1898b51 883 Gene3D G3DSA:3.40.309.10 329 421 1.2E-29 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 SII_RS00440 92748e6afe8bf6ddc2c55d24b1898b51 883 Pfam PF00465 Iron-containing alcohol dehydrogenase 473 861 1.2E-113 T 22-04-2016 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 SII_RS00440 92748e6afe8bf6ddc2c55d24b1898b51 883 PANTHER PTHR11496 380 877 1.0E-300 T 22-04-2016 SII_RS00440 92748e6afe8bf6ddc2c55d24b1898b51 883 Gene3D G3DSA:1.20.1090.10 660 873 5.2E-68 T 22-04-2016 SII_RS00440 92748e6afe8bf6ddc2c55d24b1898b51 883 PIRSF PIRSF000111 3 876 0.0 T 22-04-2016 IPR012079 Bifunctional aldehyde-alcohol dehydrogenase GO:0004022|GO:0006066|GO:0008774|GO:0015976|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00592+1.1.1.1|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00650+1.2.1.10|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7085|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7180|MetaCyc: PWY-7396 SII_RS00440 92748e6afe8bf6ddc2c55d24b1898b51 883 Gene3D G3DSA:3.40.50.1970 466 658 2.5E-64 T 22-04-2016 SII_RS00440 92748e6afe8bf6ddc2c55d24b1898b51 883 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 647 675 - T 22-04-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 SII_RS00440 92748e6afe8bf6ddc2c55d24b1898b51 883 Gene3D G3DSA:3.40.605.10 14 236 1.1E-21 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 SII_RS00440 92748e6afe8bf6ddc2c55d24b1898b51 883 SUPERFAMILY SSF56796 464 876 1.11E-114 T 22-04-2016 SII_RS00440 92748e6afe8bf6ddc2c55d24b1898b51 883 Pfam PF00171 Aldehyde dehydrogenase family 15 419 5.2E-25 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 SII_RS05550 319f94508e09983725ca392a585f2875 1160 PANTHER PTHR13246:SF1 72 544 5.2E-73 T 22-04-2016 SII_RS05550 319f94508e09983725ca392a585f2875 1160 TIGRFAM TIGR01167 LPXTG_anchor: LPXTG cell wall anchor domain 1129 1159 0.0014 T 22-04-2016 IPR019931 LPXTG cell wall anchor domain SII_RS05550 319f94508e09983725ca392a585f2875 1160 Pfam PF03644 Glycosyl hydrolase family 85 139 441 3.5E-76 T 22-04-2016 IPR005201 Glycoside hydrolase, family 85 GO:0005737|GO:0033925 KEGG: 00511+3.2.1.96 SII_RS05550 319f94508e09983725ca392a585f2875 1160 SUPERFAMILY SSF49785 715 853 3.57E-6 T 22-04-2016 IPR008979 Galactose-binding domain-like SII_RS05550 319f94508e09983725ca392a585f2875 1160 PANTHER PTHR13246 72 544 5.2E-73 T 22-04-2016 IPR032979 Cytosolic endo-beta-N-acetylglucosaminidase GO:0033925 KEGG: 00511+3.2.1.96 SII_RS05680 85682d8fd5399251b91ae81a3157e89c 648 SUPERFAMILY SSF56719 403 640 2.62E-85 T 22-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 SII_RS05680 85682d8fd5399251b91ae81a3157e89c 648 Gene3D G3DSA:3.40.50.670 413 631 3.2E-90 T 22-04-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 SII_RS05680 85682d8fd5399251b91ae81a3157e89c 648 PRINTS PR00418 DNA topoisomerase II family signature 429 443 3.0E-68 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SII_RS05680 85682d8fd5399251b91ae81a3157e89c 648 PRINTS PR00418 DNA topoisomerase II family signature 277 290 3.0E-68 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SII_RS05680 85682d8fd5399251b91ae81a3157e89c 648 PRINTS PR00418 DNA topoisomerase II family signature 533 545 3.0E-68 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SII_RS05680 85682d8fd5399251b91ae81a3157e89c 648 PRINTS PR00418 DNA topoisomerase II family signature 77 90 3.0E-68 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SII_RS05680 85682d8fd5399251b91ae81a3157e89c 648 PRINTS PR00418 DNA topoisomerase II family signature 495 511 3.0E-68 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SII_RS05680 85682d8fd5399251b91ae81a3157e89c 648 PRINTS PR00418 DNA topoisomerase II family signature 513 530 3.0E-68 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SII_RS05680 85682d8fd5399251b91ae81a3157e89c 648 PRINTS PR00418 DNA topoisomerase II family signature 42 57 3.0E-68 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SII_RS05680 85682d8fd5399251b91ae81a3157e89c 648 PRINTS PR00418 DNA topoisomerase II family signature 120 134 3.0E-68 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SII_RS05680 85682d8fd5399251b91ae81a3157e89c 648 PRINTS PR00418 DNA topoisomerase II family signature 581 597 3.0E-68 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SII_RS05680 85682d8fd5399251b91ae81a3157e89c 648 SMART SM00387 38 182 8.6E-22 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SII_RS05680 85682d8fd5399251b91ae81a3157e89c 648 SMART SM00433 42 642 0.0 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SII_RS05680 85682d8fd5399251b91ae81a3157e89c 648 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 10 648 89.342 T 22-04-2016 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 SII_RS05680 85682d8fd5399251b91ae81a3157e89c 648 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 40 181 4.4E-23 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SII_RS05680 85682d8fd5399251b91ae81a3157e89c 648 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 13 646 6.1E-300 T 22-04-2016 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 SII_RS05680 85682d8fd5399251b91ae81a3157e89c 648 SUPERFAMILY SSF55874 13 225 2.62E-73 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SII_RS05680 85682d8fd5399251b91ae81a3157e89c 648 Gene3D G3DSA:3.30.565.10 13 223 1.5E-91 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SII_RS05680 85682d8fd5399251b91ae81a3157e89c 648 SUPERFAMILY SSF54211 230 400 2.66E-63 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SII_RS05680 85682d8fd5399251b91ae81a3157e89c 648 Gene3D G3DSA:3.30.230.10 229 401 1.7E-75 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SII_RS05680 85682d8fd5399251b91ae81a3157e89c 648 PRINTS PR01159 DNA gyrase subunit B signature 188 203 1.1E-76 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SII_RS05680 85682d8fd5399251b91ae81a3157e89c 648 PRINTS PR01159 DNA gyrase subunit B signature 479 488 1.1E-76 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SII_RS05680 85682d8fd5399251b91ae81a3157e89c 648 PRINTS PR01159 DNA gyrase subunit B signature 618 634 1.1E-76 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SII_RS05680 85682d8fd5399251b91ae81a3157e89c 648 PRINTS PR01159 DNA gyrase subunit B signature 321 337 1.1E-76 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SII_RS05680 85682d8fd5399251b91ae81a3157e89c 648 PRINTS PR01159 DNA gyrase subunit B signature 229 251 1.1E-76 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SII_RS05680 85682d8fd5399251b91ae81a3157e89c 648 PRINTS PR01159 DNA gyrase subunit B signature 203 216 1.1E-76 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SII_RS05680 85682d8fd5399251b91ae81a3157e89c 648 PRINTS PR01159 DNA gyrase subunit B signature 13 23 1.1E-76 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SII_RS05680 85682d8fd5399251b91ae81a3157e89c 648 PRINTS PR01159 DNA gyrase subunit B signature 602 614 1.1E-76 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SII_RS05680 85682d8fd5399251b91ae81a3157e89c 648 PRINTS PR01159 DNA gyrase subunit B signature 383 403 1.1E-76 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SII_RS05680 85682d8fd5399251b91ae81a3157e89c 648 PRINTS PR01159 DNA gyrase subunit B signature 369 383 1.1E-76 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SII_RS05680 85682d8fd5399251b91ae81a3157e89c 648 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 577 638 1.7E-29 T 22-04-2016 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 SII_RS05680 85682d8fd5399251b91ae81a3157e89c 648 ProSitePatterns PS00177 DNA topoisomerase II signature. 431 439 - T 22-04-2016 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 SII_RS05680 85682d8fd5399251b91ae81a3157e89c 648 Pfam PF01751 Toprim domain 428 539 8.0E-18 T 22-04-2016 IPR006171 Toprim domain SII_RS05680 85682d8fd5399251b91ae81a3157e89c 648 PANTHER PTHR10169 6 641 6.6E-304 T 22-04-2016 SII_RS05680 85682d8fd5399251b91ae81a3157e89c 648 Pfam PF00204 DNA gyrase B 230 399 3.6E-66 T 22-04-2016 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 SII_RS08440 9e201b674554396a912862647e274f5c 448 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 8 446 3.6E-167 T 22-04-2016 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 SII_RS08440 9e201b674554396a912862647e274f5c 448 PANTHER PTHR20852:SF7 1 448 2.3E-185 T 22-04-2016 SII_RS08440 9e201b674554396a912862647e274f5c 448 SUPERFAMILY SSF55931 107 446 9.81E-122 T 22-04-2016 SII_RS08440 9e201b674554396a912862647e274f5c 448 Gene3D G3DSA:3.30.590.10 110 434 1.5E-121 T 22-04-2016 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Reactome: REACT_13 SII_RS08440 9e201b674554396a912862647e274f5c 448 ProSitePatterns PS00180 Glutamine synthetase signature 1. 53 71 - T 22-04-2016 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 SII_RS08440 9e201b674554396a912862647e274f5c 448 SMART SM01230 106 358 1.7E-127 T 22-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 SII_RS08440 9e201b674554396a912862647e274f5c 448 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 16 99 2.8E-28 T 22-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 SII_RS08440 9e201b674554396a912862647e274f5c 448 SUPERFAMILY SSF54368 4 105 6.54E-30 T 22-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 SII_RS08440 9e201b674554396a912862647e274f5c 448 PANTHER PTHR20852 1 448 2.3E-185 T 22-04-2016 SII_RS08440 9e201b674554396a912862647e274f5c 448 Pfam PF00120 Glutamine synthetase, catalytic domain 107 444 2.7E-136 T 22-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 SII_RS08440 9e201b674554396a912862647e274f5c 448 Gene3D G3DSA:3.10.20.70 5 109 4.5E-38 T 22-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 SII_RS09380 989262f5c353b754ae5800e01fafd774 450 PANTHER PTHR30153 1 445 8.4E-188 T 22-04-2016 SII_RS09380 989262f5c353b754ae5800e01fafd774 450 Pfam PF03796 DnaB-like helicase C terminal domain 185 443 6.6E-109 T 22-04-2016 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 SII_RS09380 989262f5c353b754ae5800e01fafd774 450 Pfam PF00772 DnaB-like helicase N terminal domain 10 111 5.1E-31 T 22-04-2016 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 SII_RS09380 989262f5c353b754ae5800e01fafd774 450 SUPERFAMILY SSF48024 8 119 7.45E-34 T 22-04-2016 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 SII_RS09380 989262f5c353b754ae5800e01fafd774 450 Gene3D G3DSA:3.40.50.300 173 446 1.1E-101 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS09380 989262f5c353b754ae5800e01fafd774 450 Gene3D G3DSA:1.10.860.10 10 112 5.7E-33 T 22-04-2016 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal SII_RS09380 989262f5c353b754ae5800e01fafd774 450 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 10 445 1.0E-165 T 22-04-2016 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 SII_RS09380 989262f5c353b754ae5800e01fafd774 450 SUPERFAMILY SSF52540 183 437 5.07E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS04820 8cdf53b33e1fa66979467c97dee26431 437 Pfam PF13439 Glycosyltransferase Family 4 15 182 7.3E-32 T 22-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain SII_RS04820 8cdf53b33e1fa66979467c97dee26431 437 Gene3D G3DSA:3.40.50.2000 188 345 1.1E-25 T 22-04-2016 SII_RS04820 8cdf53b33e1fa66979467c97dee26431 437 PANTHER PTHR12526:SF363 1 419 1.4E-100 T 22-04-2016 SII_RS04820 8cdf53b33e1fa66979467c97dee26431 437 SUPERFAMILY SSF53756 1 379 1.22E-74 T 22-04-2016 SII_RS04820 8cdf53b33e1fa66979467c97dee26431 437 Pfam PF00534 Glycosyl transferases group 1 197 341 4.5E-28 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 SII_RS04820 8cdf53b33e1fa66979467c97dee26431 437 PANTHER PTHR12526 1 419 1.4E-100 T 22-04-2016 SII_RS07515 e547e9f7d9eba57c7a9d71f0cc73df0f 422 TIGRFAM TIGR00359 cello_pts_IIC: PTS system, cellobiose-specific IIC component 12 417 3.5E-146 T 22-04-2016 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 SII_RS07515 e547e9f7d9eba57c7a9d71f0cc73df0f 422 PANTHER PTHR33989 1 416 2.4E-238 T 22-04-2016 SII_RS07515 e547e9f7d9eba57c7a9d71f0cc73df0f 422 PIRSF PIRSF006351 1 420 8.5E-135 T 22-04-2016 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 SII_RS07515 e547e9f7d9eba57c7a9d71f0cc73df0f 422 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 12 417 3.5E-146 T 22-04-2016 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 SII_RS07515 e547e9f7d9eba57c7a9d71f0cc73df0f 422 Pfam PF02378 Phosphotransferase system, EIIC 29 349 6.9E-65 T 22-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 SII_RS07515 e547e9f7d9eba57c7a9d71f0cc73df0f 422 PANTHER PTHR33989:SF3 1 416 2.4E-238 T 22-04-2016 SII_RS04715 aa86890f2bfb90ed31d01bc7b442341c 97 ProSitePatterns PS00831 Ribosomal protein L27 signature. 45 59 - T 22-04-2016 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SII_RS04715 aa86890f2bfb90ed31d01bc7b442341c 97 TIGRFAM TIGR00062 L27: ribosomal protein bL27 12 92 1.7E-37 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SII_RS04715 aa86890f2bfb90ed31d01bc7b442341c 97 Gene3D G3DSA:2.40.50.100 31 95 3.3E-30 T 22-04-2016 SII_RS04715 aa86890f2bfb90ed31d01bc7b442341c 97 Pfam PF01016 Ribosomal L27 protein 13 92 1.1E-33 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SII_RS04715 aa86890f2bfb90ed31d01bc7b442341c 97 PANTHER PTHR15893 6 96 3.2E-45 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SII_RS04715 aa86890f2bfb90ed31d01bc7b442341c 97 PRINTS PR00063 Ribosomal protein L27 signature 40 64 2.3E-36 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SII_RS04715 aa86890f2bfb90ed31d01bc7b442341c 97 PRINTS PR00063 Ribosomal protein L27 signature 65 89 2.3E-36 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SII_RS04715 aa86890f2bfb90ed31d01bc7b442341c 97 PRINTS PR00063 Ribosomal protein L27 signature 15 39 2.3E-36 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SII_RS04715 aa86890f2bfb90ed31d01bc7b442341c 97 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 12 95 26.536 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SII_RS04715 aa86890f2bfb90ed31d01bc7b442341c 97 SUPERFAMILY SSF110324 13 94 1.81E-31 T 22-04-2016 SII_RS04715 aa86890f2bfb90ed31d01bc7b442341c 97 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 39 80 9.0E-18 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SII_RS02110 0081282e90c68514bd52a8714f6bff91 228 TIGRFAM TIGR02206 intg_mem_TP0381: conserved hypothetical integral membrane protein TIGR02206 20 196 9.2E-25 T 22-04-2016 IPR011737 Conserved hypothetical protein CHP02206, TP0381 SII_RS02110 0081282e90c68514bd52a8714f6bff91 228 Pfam PF09529 Integral membrane protein (intg_mem_TP0381) 22 206 1.2E-32 T 22-04-2016 IPR011737 Conserved hypothetical protein CHP02206, TP0381 SII_RS03635 128fb7b31ca39bc3cf722878242cb379 166 SUPERFAMILY SSF55729 11 149 4.88E-20 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SII_RS03635 128fb7b31ca39bc3cf722878242cb379 166 Pfam PF13673 Acetyltransferase (GNAT) domain 58 152 4.3E-9 T 22-04-2016 IPR000182 GNAT domain GO:0008080 SII_RS03635 128fb7b31ca39bc3cf722878242cb379 166 PANTHER PTHR23091:SF228 1 149 2.4E-29 T 22-04-2016 SII_RS03635 128fb7b31ca39bc3cf722878242cb379 166 Gene3D G3DSA:3.40.630.30 10 151 2.9E-19 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SII_RS03635 128fb7b31ca39bc3cf722878242cb379 166 PANTHER PTHR23091 1 149 2.4E-29 T 22-04-2016 SII_RS08760 1dd883bf61b22b82af9822594ad1b1c5 217 SUPERFAMILY SSF54814 2 105 1.26E-37 T 22-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 SII_RS08760 1dd883bf61b22b82af9822594ad1b1c5 217 SMART SM00322 59 124 2.6E-9 T 22-04-2016 IPR004087 K Homology domain GO:0003676 SII_RS08760 1dd883bf61b22b82af9822594ad1b1c5 217 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 205 38.112 T 22-04-2016 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 SII_RS08760 1dd883bf61b22b82af9822594ad1b1c5 217 Pfam PF00189 Ribosomal protein S3, C-terminal domain 119 201 7.8E-40 T 22-04-2016 SII_RS08760 1dd883bf61b22b82af9822594ad1b1c5 217 Pfam PF07650 KH domain 38 109 1.5E-20 T 22-04-2016 IPR004044 K Homology domain, type 2 GO:0003723 SII_RS08760 1dd883bf61b22b82af9822594ad1b1c5 217 Gene3D G3DSA:3.30.1140.32 107 206 2.1E-43 T 22-04-2016 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 SII_RS08760 1dd883bf61b22b82af9822594ad1b1c5 217 ProSitePatterns PS00548 Ribosomal protein S3 signature. 162 196 - T 22-04-2016 IPR018280 Ribosomal protein S3, conserved site SII_RS08760 1dd883bf61b22b82af9822594ad1b1c5 217 PANTHER PTHR11760 2 214 3.5E-133 T 22-04-2016 SII_RS08760 1dd883bf61b22b82af9822594ad1b1c5 217 Gene3D G3DSA:3.30.300.20 17 106 6.6E-34 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta SII_RS08760 1dd883bf61b22b82af9822594ad1b1c5 217 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 207 1.5E-92 T 22-04-2016 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 SII_RS08760 1dd883bf61b22b82af9822594ad1b1c5 217 PANTHER PTHR11760:SF19 2 214 3.5E-133 T 22-04-2016 SII_RS08760 1dd883bf61b22b82af9822594ad1b1c5 217 SUPERFAMILY SSF54821 106 205 3.27E-37 T 22-04-2016 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 SII_RS07435 9fdc3e5ed97a7a12e0386dec7dd3aaa2 150 PANTHER PTHR31964:SF45 3 148 3.3E-37 T 22-04-2016 SII_RS07435 9fdc3e5ed97a7a12e0386dec7dd3aaa2 150 Pfam PF00582 Universal stress protein family 5 144 2.7E-38 T 22-04-2016 IPR006016 UspA GO:0006950 SII_RS07435 9fdc3e5ed97a7a12e0386dec7dd3aaa2 150 PANTHER PTHR31964 3 148 3.3E-37 T 22-04-2016 SII_RS07435 9fdc3e5ed97a7a12e0386dec7dd3aaa2 150 PRINTS PR01438 Universal stress protein signature 122 144 2.9E-17 T 22-04-2016 IPR006015 Universal stress protein A SII_RS07435 9fdc3e5ed97a7a12e0386dec7dd3aaa2 150 PRINTS PR01438 Universal stress protein signature 5 23 2.9E-17 T 22-04-2016 IPR006015 Universal stress protein A SII_RS07435 9fdc3e5ed97a7a12e0386dec7dd3aaa2 150 PRINTS PR01438 Universal stress protein signature 104 116 2.9E-17 T 22-04-2016 IPR006015 Universal stress protein A SII_RS07435 9fdc3e5ed97a7a12e0386dec7dd3aaa2 150 PIRSF PIRSF006276 1 147 2.9E-19 T 22-04-2016 IPR006015 Universal stress protein A SII_RS07435 9fdc3e5ed97a7a12e0386dec7dd3aaa2 150 SUPERFAMILY SSF52402 5 147 1.0E-34 T 22-04-2016 SII_RS07435 9fdc3e5ed97a7a12e0386dec7dd3aaa2 150 Gene3D G3DSA:3.40.50.620 5 144 2.8E-42 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SII_RS07805 ac142ca8cb700fa55cdc85ceeeb38c43 91 SMART SM00530 35 89 5.5E-10 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SII_RS07805 ac142ca8cb700fa55cdc85ceeeb38c43 91 SUPERFAMILY SSF47413 34 90 2.45E-12 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SII_RS07805 ac142ca8cb700fa55cdc85ceeeb38c43 91 Pfam PF01381 Helix-turn-helix 39 83 2.6E-12 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SII_RS07805 ac142ca8cb700fa55cdc85ceeeb38c43 91 Gene3D G3DSA:1.10.260.40 36 88 4.4E-14 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SII_RS00040 58a33e28eaca7bf74d0f61b98ad1bb28 88 Gene3D G3DSA:3.10.290.10 1 85 8.6E-24 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SII_RS00040 58a33e28eaca7bf74d0f61b98ad1bb28 88 SUPERFAMILY SSF55174 1 78 2.09E-20 T 22-04-2016 SII_RS00040 58a33e28eaca7bf74d0f61b98ad1bb28 88 SMART SM00363 1 62 2.1E-8 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SII_RS00040 58a33e28eaca7bf74d0f61b98ad1bb28 88 PIRSF PIRSF038881 1 87 8.2E-39 T 22-04-2016 IPR025490 RNA-binding protein, HP1423 type SII_RS00040 58a33e28eaca7bf74d0f61b98ad1bb28 88 Pfam PF01479 S4 domain 1 47 2.0E-9 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SII_RS08460 49291fbb1a1831b62eabf8a8a9ba1a0f 1310 TIGRFAM TIGR03726 strep_RK_lipo: putative cross-wall-targeting lipoprotein signal 8 40 1.0E-13 T 22-04-2016 IPR021197 Cross-wall-targeting lipoprotein motif SII_RS08460 49291fbb1a1831b62eabf8a8a9ba1a0f 1310 TIGRFAM TIGR04228 isopep_sspB_C2: adhesin isopeptide-forming adherence domain 914 1087 7.3E-68 T 22-04-2016 IPR026345 Adhesin isopeptide-forming adherence domain SII_RS08460 49291fbb1a1831b62eabf8a8a9ba1a0f 1310 Gene3D G3DSA:1.20.5.250 299 330 6.8E-18 T 22-04-2016 SII_RS08460 49291fbb1a1831b62eabf8a8a9ba1a0f 1310 Pfam PF16364 Cell surface antigen C-terminus 1045 1233 9.4E-28 T 22-04-2016 IPR032300 Cell surface antigen, C-terminal SII_RS08460 49291fbb1a1831b62eabf8a8a9ba1a0f 1310 ProDom PD936484 POLYPROTEIN GLYCOPROTEIN M G2 TRANSMEMBRANE NONSTRUCTURAL MEMBRANE CONTAINS: PRECURSOR SIGNAL 33 425 0.007 T 22-04-2016 SII_RS08460 49291fbb1a1831b62eabf8a8a9ba1a0f 1310 Pfam PF06696 Streptococcal surface antigen repeat 282 305 3.5E-7 T 22-04-2016 IPR009578 Cell surface antigen repeat SII_RS08460 49291fbb1a1831b62eabf8a8a9ba1a0f 1310 Pfam PF06696 Streptococcal surface antigen repeat 225 249 9.6E-9 T 22-04-2016 IPR009578 Cell surface antigen repeat SII_RS08460 49291fbb1a1831b62eabf8a8a9ba1a0f 1310 Pfam PF06696 Streptococcal surface antigen repeat 200 224 6.6E-8 T 22-04-2016 IPR009578 Cell surface antigen repeat SII_RS08460 49291fbb1a1831b62eabf8a8a9ba1a0f 1310 PRINTS PR01217 Proline rich extensin signature 705 721 9.3E-9 T 22-04-2016 SII_RS08460 49291fbb1a1831b62eabf8a8a9ba1a0f 1310 PRINTS PR01217 Proline rich extensin signature 669 681 9.3E-9 T 22-04-2016 SII_RS08460 49291fbb1a1831b62eabf8a8a9ba1a0f 1310 PRINTS PR01217 Proline rich extensin signature 728 745 9.3E-9 T 22-04-2016 SII_RS08460 49291fbb1a1831b62eabf8a8a9ba1a0f 1310 PRINTS PR01217 Proline rich extensin signature 684 705 9.3E-9 T 22-04-2016 SII_RS08460 49291fbb1a1831b62eabf8a8a9ba1a0f 1310 TIGRFAM TIGR01167 LPXTG_anchor: LPXTG cell wall anchor domain 1276 1310 6.3E-6 T 22-04-2016 IPR019931 LPXTG cell wall anchor domain SII_RS08460 49291fbb1a1831b62eabf8a8a9ba1a0f 1310 SUPERFAMILY SSF74914 299 673 1.83E-143 T 22-04-2016 IPR013574 Glucan-binding protein C/Surface antigen I/II, V-domain SII_RS08460 49291fbb1a1831b62eabf8a8a9ba1a0f 1310 Pfam PF08363 Glucan-binding protein C 327 653 8.7E-104 T 22-04-2016 IPR013574 Glucan-binding protein C/Surface antigen I/II, V-domain SII_RS08460 49291fbb1a1831b62eabf8a8a9ba1a0f 1310 Pfam PF00746 Gram positive anchor 1271 1304 9.4E-6 T 22-04-2016 IPR019948 Gram-positive anchor SII_RS02495 759cc3a306fb60fcd3ea44f7d5d0c68a 303 TIGRFAM TIGR03168 1-PFK: hexose kinase, 1-phosphofructokinase family 2 301 9.2E-107 T 22-04-2016 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 SII_RS02495 759cc3a306fb60fcd3ea44f7d5d0c68a 303 PANTHER PTHR10584 1 303 3.6E-110 T 22-04-2016 SII_RS02495 759cc3a306fb60fcd3ea44f7d5d0c68a 303 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 243 256 - T 22-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 SII_RS02495 759cc3a306fb60fcd3ea44f7d5d0c68a 303 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 36 60 - T 22-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 SII_RS02495 759cc3a306fb60fcd3ea44f7d5d0c68a 303 PANTHER PTHR10584:SF170 1 303 3.6E-110 T 22-04-2016 SII_RS02495 759cc3a306fb60fcd3ea44f7d5d0c68a 303 TIGRFAM TIGR03828 pfkB: 1-phosphofructokinase 2 301 1.5E-108 T 22-04-2016 IPR022463 Fructose 1-phosphate kinase GO:0008662 KEGG: 00051+2.7.1.56 SII_RS02495 759cc3a306fb60fcd3ea44f7d5d0c68a 303 SUPERFAMILY SSF53613 1 282 3.27E-65 T 22-04-2016 IPR029056 Ribokinase-like SII_RS02495 759cc3a306fb60fcd3ea44f7d5d0c68a 303 Pfam PF00294 pfkB family carbohydrate kinase 8 280 6.1E-50 T 22-04-2016 IPR011611 Carbohydrate kinase PfkB SII_RS02495 759cc3a306fb60fcd3ea44f7d5d0c68a 303 Gene3D G3DSA:2.20.150.10 9 35 1.2E-4 T 22-04-2016 IPR023314 Tagatose-6-phosphate kinase/1-phosphofructokinase N-terminal domain KEGG: 00052+2.7.1.144|KEGG: 00710+2.7.1.14|MetaCyc: PWY-7077|MetaCyc: PWY-7395|UniPathway: UPA00704 SII_RS02495 759cc3a306fb60fcd3ea44f7d5d0c68a 303 Gene3D G3DSA:3.40.1190.20 36 303 1.4E-78 T 22-04-2016 IPR029056 Ribokinase-like SII_RS02495 759cc3a306fb60fcd3ea44f7d5d0c68a 303 PIRSF PIRSF000535 1 303 1.3E-83 T 22-04-2016 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 SII_RS08860 b2fb6d8914f7d00a328f67bf84a5d6ab 847 Pfam PF04650 YSIRK type signal peptide 11 35 5.6E-9 T 22-04-2016 IPR005877 YSIRK Gram-positive signal peptide GO:0016020 SII_RS08860 b2fb6d8914f7d00a328f67bf84a5d6ab 847 Pfam PF11966 Fibronectin-binding repeat 217 297 2.9E-34 T 22-04-2016 IPR021021 Fibronectin-binding repeat, SSURE SII_RS08860 b2fb6d8914f7d00a328f67bf84a5d6ab 847 Pfam PF11966 Fibronectin-binding repeat 674 753 2.8E-36 T 22-04-2016 IPR021021 Fibronectin-binding repeat, SSURE SII_RS08860 b2fb6d8914f7d00a328f67bf84a5d6ab 847 Pfam PF11966 Fibronectin-binding repeat 523 604 4.0E-36 T 22-04-2016 IPR021021 Fibronectin-binding repeat, SSURE SII_RS08860 b2fb6d8914f7d00a328f67bf84a5d6ab 847 Pfam PF11966 Fibronectin-binding repeat 372 453 6.9E-35 T 22-04-2016 IPR021021 Fibronectin-binding repeat, SSURE SII_RS08860 b2fb6d8914f7d00a328f67bf84a5d6ab 847 TIGRFAM TIGR01168 YSIRK_signal: gram-positive signal peptide, YSIRK family 9 45 9.2E-13 T 22-04-2016 IPR005877 YSIRK Gram-positive signal peptide GO:0016020 SII_RS08860 b2fb6d8914f7d00a328f67bf84a5d6ab 847 Pfam PF00746 Gram positive anchor 805 837 7.4E-5 T 22-04-2016 IPR019948 Gram-positive anchor SII_RS08860 b2fb6d8914f7d00a328f67bf84a5d6ab 847 TIGRFAM TIGR01167 LPXTG_anchor: LPXTG cell wall anchor domain 810 846 1.8E-5 T 22-04-2016 IPR019931 LPXTG cell wall anchor domain SII_RS09035 c5d073f93a4000c07534aaf6c6a9751b 146 PANTHER PTHR37299 1 146 1.6E-47 T 22-04-2016 SII_RS09035 c5d073f93a4000c07534aaf6c6a9751b 146 Gene3D G3DSA:2.40.50.40 40 108 4.1E-11 T 22-04-2016 SII_RS09035 c5d073f93a4000c07534aaf6c6a9751b 146 PANTHER PTHR37299:SF2 1 146 1.6E-47 T 22-04-2016 SII_RS09035 c5d073f93a4000c07534aaf6c6a9751b 146 Pfam PF04397 LytTr DNA-binding domain 50 144 1.6E-17 T 22-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 SII_RS09035 c5d073f93a4000c07534aaf6c6a9751b 146 SMART SM00850 49 145 2.6E-26 T 22-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 SII_RS01535 1521af2baf65fd969425ca526ca45334 141 Pfam PF01029 NusB family 11 139 4.6E-31 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 SII_RS01535 1521af2baf65fd969425ca526ca45334 141 Gene3D G3DSA:1.10.940.10 8 140 1.4E-38 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 SII_RS01535 1521af2baf65fd969425ca526ca45334 141 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 9 140 4.1E-36 T 22-04-2016 IPR011605 NusB antitermination factor GO:0006353 SII_RS01535 1521af2baf65fd969425ca526ca45334 141 Hamap MF_00073 N utilization substance protein B homolog [nusB]. 7 141 19.246 T 22-04-2016 IPR011605 NusB antitermination factor GO:0006353 SII_RS01535 1521af2baf65fd969425ca526ca45334 141 SUPERFAMILY SSF48013 8 139 2.22E-32 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 SII_RS01535 1521af2baf65fd969425ca526ca45334 141 PANTHER PTHR11078 1 141 5.3E-38 T 22-04-2016 IPR011605 NusB antitermination factor GO:0006353 SII_RS07975 b7fb96aa16a06ed18a8311a46d4d437c 726 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 10 694 1.3E-299 T 22-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 SII_RS07975 b7fb96aa16a06ed18a8311a46d4d437c 726 Gene3D G3DSA:2.40.50.140 623 696 4.5E-24 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SII_RS07975 b7fb96aa16a06ed18a8311a46d4d437c 726 Gene3D G3DSA:3.30.230.70 314 545 1.6E-85 T 22-04-2016 IPR027408 PNPase/RNase PH domain SII_RS07975 b7fb96aa16a06ed18a8311a46d4d437c 726 Gene3D G3DSA:3.30.230.70 6 222 1.9E-81 T 22-04-2016 IPR027408 PNPase/RNase PH domain SII_RS07975 b7fb96aa16a06ed18a8311a46d4d437c 726 SUPERFAMILY SSF55666 453 551 1.09E-28 T 22-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 SII_RS07975 b7fb96aa16a06ed18a8311a46d4d437c 726 SMART SM00316 623 693 1.6E-24 T 22-04-2016 IPR022967 RNA-binding domain, S1 SII_RS07975 b7fb96aa16a06ed18a8311a46d4d437c 726 Gene3D G3DSA:3.30.1370.10 554 622 2.2E-23 T 22-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 SII_RS07975 b7fb96aa16a06ed18a8311a46d4d437c 726 SUPERFAMILY SSF55666 143 233 2.23E-28 T 22-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 SII_RS07975 b7fb96aa16a06ed18a8311a46d4d437c 726 PANTHER PTHR11252 1 726 0.0 T 22-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 SII_RS07975 b7fb96aa16a06ed18a8311a46d4d437c 726 SUPERFAMILY SSF50249 613 697 2.91E-20 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SII_RS07975 b7fb96aa16a06ed18a8311a46d4d437c 726 PIRSF PIRSF005499 1 726 2.4E-285 T 22-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 SII_RS07975 b7fb96aa16a06ed18a8311a46d4d437c 726 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 2 696 29.337 T 22-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 SII_RS07975 b7fb96aa16a06ed18a8311a46d4d437c 726 PANTHER PTHR11252:SF0 1 726 0.0 T 22-04-2016 SII_RS07975 b7fb96aa16a06ed18a8311a46d4d437c 726 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 240 323 2.5E-11 T 22-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 SII_RS07975 b7fb96aa16a06ed18a8311a46d4d437c 726 Pfam PF03725 3' exoribonuclease family, domain 2 462 532 6.7E-8 T 22-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 SII_RS07975 b7fb96aa16a06ed18a8311a46d4d437c 726 Pfam PF03725 3' exoribonuclease family, domain 2 145 208 5.8E-13 T 22-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 SII_RS07975 b7fb96aa16a06ed18a8311a46d4d437c 726 Pfam PF01138 3' exoribonuclease family, domain 1 13 142 2.7E-19 T 22-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 SII_RS07975 b7fb96aa16a06ed18a8311a46d4d437c 726 Pfam PF01138 3' exoribonuclease family, domain 1 326 459 4.3E-15 T 22-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 SII_RS07975 b7fb96aa16a06ed18a8311a46d4d437c 726 SUPERFAMILY SSF54211 7 142 8.6E-45 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SII_RS07975 b7fb96aa16a06ed18a8311a46d4d437c 726 Pfam PF00575 S1 RNA binding domain 622 693 1.8E-18 T 22-04-2016 IPR003029 S1 domain GO:0003676 SII_RS07975 b7fb96aa16a06ed18a8311a46d4d437c 726 SUPERFAMILY SSF54211 297 490 3.29E-44 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SII_RS07975 b7fb96aa16a06ed18a8311a46d4d437c 726 SMART SM00322 555 620 2.3E-12 T 22-04-2016 IPR004087 K Homology domain GO:0003676 SII_RS07975 b7fb96aa16a06ed18a8311a46d4d437c 726 SUPERFAMILY SSF46915 236 323 1.7E-13 T 22-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 SII_RS07975 b7fb96aa16a06ed18a8311a46d4d437c 726 SUPERFAMILY SSF54791 555 632 3.04E-17 T 22-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 SII_RS07975 b7fb96aa16a06ed18a8311a46d4d437c 726 Pfam PF00013 KH domain 560 616 1.3E-10 T 22-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 SII_RS07975 b7fb96aa16a06ed18a8311a46d4d437c 726 Gene3D G3DSA:1.10.10.400 228 313 7.0E-35 T 22-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 SII_RS02085 e4d948b5846ae061e757f66ea17f91d7 198 Hamap MF_00017 Recombination protein RecR [recR]. 1 198 101.351 T 22-04-2016 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 SII_RS02085 e4d948b5846ae061e757f66ea17f91d7 198 PANTHER PTHR30446 1 198 4.5E-110 T 22-04-2016 SII_RS02085 e4d948b5846ae061e757f66ea17f91d7 198 TIGRFAM TIGR00615 recR: recombination protein RecR 2 196 5.0E-84 T 22-04-2016 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 SII_RS02085 e4d948b5846ae061e757f66ea17f91d7 198 SMART SM00493 80 165 8.9E-12 T 22-04-2016 IPR006171 Toprim domain SII_RS02085 e4d948b5846ae061e757f66ea17f91d7 198 Pfam PF13662 Toprim domain 80 171 2.7E-22 T 22-04-2016 IPR006171 Toprim domain SII_RS02085 e4d948b5846ae061e757f66ea17f91d7 198 PANTHER PTHR30446:SF0 1 198 4.5E-110 T 22-04-2016 SII_RS02085 e4d948b5846ae061e757f66ea17f91d7 198 SUPERFAMILY SSF111304 1 198 8.76E-74 T 22-04-2016 IPR023627 Recombination protein RecR SII_RS02085 e4d948b5846ae061e757f66ea17f91d7 198 Pfam PF02132 RecR protein 39 78 8.7E-16 T 22-04-2016 IPR023628 Recombination protein RecR, C4-type zinc finger SII_RS02085 e4d948b5846ae061e757f66ea17f91d7 198 ProSitePatterns PS01300 RecR protein signature. 57 78 - T 22-04-2016 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 SII_RS02725 b6d5997d2bc7ddd22f73a8b05aba087e 303 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 19 295 2.7E-85 T 22-04-2016 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 SII_RS02725 b6d5997d2bc7ddd22f73a8b05aba087e 303 SUPERFAMILY SSF161098 23 292 6.64E-40 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SII_RS02725 b6d5997d2bc7ddd22f73a8b05aba087e 303 PANTHER PTHR30425:SF6 2 303 1.6E-160 T 22-04-2016 SII_RS02725 b6d5997d2bc7ddd22f73a8b05aba087e 303 Gene3D G3DSA:1.10.3720.10 28 299 2.8E-42 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SII_RS02725 b6d5997d2bc7ddd22f73a8b05aba087e 303 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 99 292 8.9E-26 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SII_RS02725 b6d5997d2bc7ddd22f73a8b05aba087e 303 PANTHER PTHR30425 2 303 1.6E-160 T 22-04-2016 SII_RS02010 eafaf078849763e00a6a9f7c3d1578ac 70 PIRSF PIRSF006488 1 70 2.8E-18 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 SII_RS02010 eafaf078849763e00a6a9f7c3d1578ac 70 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 6 66 14.347 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 SII_RS02010 eafaf078849763e00a6a9f7c3d1578ac 70 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 1 48 2.0E-15 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 SII_RS02010 eafaf078849763e00a6a9f7c3d1578ac 70 SUPERFAMILY SSF116842 3 68 4.05E-18 T 22-04-2016 SII_RS02010 eafaf078849763e00a6a9f7c3d1578ac 70 Gene3D G3DSA:1.10.287.1040 3 68 7.6E-23 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 SII_RS02010 eafaf078849763e00a6a9f7c3d1578ac 70 PANTHER PTHR34137 1 70 3.0E-20 T 22-04-2016 SII_RS02010 eafaf078849763e00a6a9f7c3d1578ac 70 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 6 61 5.9E-22 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 SII_RS02010 eafaf078849763e00a6a9f7c3d1578ac 70 Pfam PF02609 Exonuclease VII small subunit 7 56 1.5E-19 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 SII_RS06495 594269bca93287dd855a188b120df0e7 241 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 65 227 2.3E-41 T 22-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 SII_RS06495 594269bca93287dd855a188b120df0e7 241 PANTHER PTHR21600:SF19 1 236 2.3E-55 T 22-04-2016 SII_RS06495 594269bca93287dd855a188b120df0e7 241 SUPERFAMILY SSF55174 1 89 1.08E-9 T 22-04-2016 SII_RS06495 594269bca93287dd855a188b120df0e7 241 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 99 113 - T 22-04-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 SII_RS06495 594269bca93287dd855a188b120df0e7 241 Pfam PF00849 RNA pseudouridylate synthase 61 193 6.2E-17 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 SII_RS06495 594269bca93287dd855a188b120df0e7 241 PANTHER PTHR21600 1 236 2.3E-55 T 22-04-2016 SII_RS06495 594269bca93287dd855a188b120df0e7 241 SUPERFAMILY SSF55120 59 231 1.23E-39 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 SII_RS06495 594269bca93287dd855a188b120df0e7 241 Gene3D G3DSA:3.10.290.10 1 63 1.2E-7 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SII_RS08260 6db9f2e4cabfa12d3ead8b46ccd2172f 441 Gene3D G3DSA:3.40.1190.10 13 308 4.9E-88 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SII_RS08260 6db9f2e4cabfa12d3ead8b46ccd2172f 441 ProSitePatterns PS01011 Folylpolyglutamate synthase signature 1. 51 74 - T 22-04-2016 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 SII_RS08260 6db9f2e4cabfa12d3ead8b46ccd2172f 441 Pfam PF08245 Mur ligase middle domain 53 279 6.0E-12 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SII_RS08260 6db9f2e4cabfa12d3ead8b46ccd2172f 441 PIRSF PIRSF001563 4 441 4.7E-127 T 22-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 SII_RS08260 6db9f2e4cabfa12d3ead8b46ccd2172f 441 Gene3D G3DSA:3.90.190.20 309 439 8.5E-28 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SII_RS08260 6db9f2e4cabfa12d3ead8b46ccd2172f 441 PANTHER PTHR11136 1 438 1.1E-118 T 22-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 SII_RS08260 6db9f2e4cabfa12d3ead8b46ccd2172f 441 TIGRFAM TIGR01499 folC: bifunctional protein FolC 31 438 1.3E-113 T 22-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 SII_RS08260 6db9f2e4cabfa12d3ead8b46ccd2172f 441 Pfam PF02875 Mur ligase family, glutamate ligase domain 307 383 1.9E-8 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SII_RS08260 6db9f2e4cabfa12d3ead8b46ccd2172f 441 SUPERFAMILY SSF53244 310 438 3.66E-21 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SII_RS08260 6db9f2e4cabfa12d3ead8b46ccd2172f 441 SUPERFAMILY SSF53623 14 307 3.36E-82 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SII_RS08260 6db9f2e4cabfa12d3ead8b46ccd2172f 441 PANTHER PTHR11136:SF0 1 438 1.1E-118 T 22-04-2016 SII_RS01830 d1d61c8420406b159978734272e59d7d 82 PANTHER PTHR41297 2 81 2.5E-28 T 22-04-2016 SII_RS01830 d1d61c8420406b159978734272e59d7d 82 Hamap MF_00363 UPF0154 protein . 2 72 19.649 T 22-04-2016 IPR005359 Protein with unknown function UPF0154 SII_RS01830 d1d61c8420406b159978734272e59d7d 82 ProDom PD048972 UPF0154 TRANSMEMBRANE MEMBRANE UNCHARACTERIZED FAMILY YNEF SUPERFAMILY MG335.1 EXPORTED MYCGA5700 1 67 5.0E-21 T 22-04-2016 IPR005359 Protein with unknown function UPF0154 SII_RS01830 d1d61c8420406b159978734272e59d7d 82 Pfam PF03672 Uncharacterised protein family (UPF0154) 10 69 8.0E-21 T 22-04-2016 IPR005359 Protein with unknown function UPF0154 SII_RS01160 52b029f49fa47e249e335b572734542c 390 PANTHER PTHR11877 2 390 4.9E-93 T 22-04-2016 SII_RS01160 52b029f49fa47e249e335b572734542c 390 PANTHER PTHR11877:SF26 2 390 4.9E-93 T 22-04-2016 SII_RS01160 52b029f49fa47e249e335b572734542c 390 TIGRFAM TIGR01835 HMG-CoA-S_prok: hydroxymethylglutaryl-CoA synthase 3 385 9.8E-167 T 22-04-2016 IPR011554 Hydroxymethylglutaryl-CoA synthase, prokaryotic KEGG: 00072+2.3.3.10|KEGG: 00280+2.3.3.10|KEGG: 00650+2.3.3.10|KEGG: 00900+2.3.3.10|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7571|MetaCyc: PWY-922|UniPathway: UPA00058 SII_RS01160 52b029f49fa47e249e335b572734542c 390 SUPERFAMILY SSF53901 2 166 5.28E-39 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SII_RS01160 52b029f49fa47e249e335b572734542c 390 Pfam PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal 247 339 3.5E-13 T 22-04-2016 IPR013746 Hydroxymethylglutaryl-coenzyme A synthase C-terminal domain GO:0004421|GO:0008299 KEGG: 00072+2.3.3.10|KEGG: 00280+2.3.3.10|KEGG: 00650+2.3.3.10|KEGG: 00900+2.3.3.10|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7571|MetaCyc: PWY-922|Reactome: REACT_22258|UniPathway: UPA00058 SII_RS01160 52b029f49fa47e249e335b572734542c 390 Pfam PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal 2 164 1.2E-9 T 22-04-2016 IPR013528 Hydroxymethylglutaryl-coenzyme A synthase, N-terminal GO:0004421|GO:0008299 Reactome: REACT_22258 SII_RS01160 52b029f49fa47e249e335b572734542c 390 SUPERFAMILY SSF53901 168 387 1.09E-64 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SII_RS01160 52b029f49fa47e249e335b572734542c 390 Gene3D G3DSA:3.40.47.10 1 250 7.5E-84 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SII_RS00750 d2d0fe304820212ecbba39db278494a5 189 SUPERFAMILY SSF46689 2 79 7.98E-17 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SII_RS00750 d2d0fe304820212ecbba39db278494a5 189 Pfam PF00440 Bacterial regulatory proteins, tetR family 11 54 1.8E-14 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SII_RS00750 d2d0fe304820212ecbba39db278494a5 189 Gene3D G3DSA:1.10.357.10 3 187 1.1E-23 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 SII_RS00750 d2d0fe304820212ecbba39db278494a5 189 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 30 53 3.23E-7 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SII_RS00750 d2d0fe304820212ecbba39db278494a5 189 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 9 22 3.23E-7 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SII_RS00750 d2d0fe304820212ecbba39db278494a5 189 PANTHER PTHR30055:SF70 3 189 2.0E-15 T 22-04-2016 SII_RS00750 d2d0fe304820212ecbba39db278494a5 189 PANTHER PTHR30055 3 189 2.0E-15 T 22-04-2016 SII_RS03710 764dd132db3bd9f8d45f3b0db9aebcd4 390 PANTHER PTHR23504:SF14 1 375 4.6E-77 T 22-04-2016 SII_RS03710 764dd132db3bd9f8d45f3b0db9aebcd4 390 SUPERFAMILY SSF103473 1 381 3.84E-67 T 22-04-2016 IPR020846 Major facilitator superfamily domain SII_RS03710 764dd132db3bd9f8d45f3b0db9aebcd4 390 PRINTS PR01035 Tetracycline resistance protein signature 93 114 2.4E-7 T 22-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 SII_RS03710 764dd132db3bd9f8d45f3b0db9aebcd4 390 PRINTS PR01035 Tetracycline resistance protein signature 123 145 2.4E-7 T 22-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 SII_RS03710 764dd132db3bd9f8d45f3b0db9aebcd4 390 PRINTS PR01035 Tetracycline resistance protein signature 35 54 2.4E-7 T 22-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 SII_RS03710 764dd132db3bd9f8d45f3b0db9aebcd4 390 PRINTS PR01035 Tetracycline resistance protein signature 207 224 2.4E-7 T 22-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 SII_RS03710 764dd132db3bd9f8d45f3b0db9aebcd4 390 PRINTS PR01035 Tetracycline resistance protein signature 326 349 2.4E-7 T 22-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 SII_RS03710 764dd132db3bd9f8d45f3b0db9aebcd4 390 Gene3D G3DSA:1.20.1250.20 1 182 1.5E-34 T 22-04-2016 SII_RS03710 764dd132db3bd9f8d45f3b0db9aebcd4 390 Gene3D G3DSA:1.20.1250.20 199 378 6.8E-27 T 22-04-2016 SII_RS03710 764dd132db3bd9f8d45f3b0db9aebcd4 390 Pfam PF07690 Major Facilitator Superfamily 1 287 3.2E-41 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SII_RS03710 764dd132db3bd9f8d45f3b0db9aebcd4 390 PANTHER PTHR23504 1 375 4.6E-77 T 22-04-2016 SII_RS02390 71115999a3099374ba4b7e00dc59b019 501 SUPERFAMILY SSF50615 10 94 6.54E-28 T 22-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SII_RS02390 71115999a3099374ba4b7e00dc59b019 501 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 1 499 49.463 T 22-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SII_RS02390 71115999a3099374ba4b7e00dc59b019 501 SUPERFAMILY SSF52540 95 370 1.11E-96 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS02390 71115999a3099374ba4b7e00dc59b019 501 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 149 364 1.4E-70 T 22-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SII_RS02390 71115999a3099374ba4b7e00dc59b019 501 SUPERFAMILY SSF47917 372 497 1.05E-46 T 22-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SII_RS02390 71115999a3099374ba4b7e00dc59b019 501 PANTHER PTHR15184:SF3 1 485 3.0E-291 T 22-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SII_RS02390 71115999a3099374ba4b7e00dc59b019 501 Gene3D G3DSA:1.20.150.20 372 497 8.6E-50 T 22-04-2016 SII_RS02390 71115999a3099374ba4b7e00dc59b019 501 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 26 92 1.6E-15 T 22-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SII_RS02390 71115999a3099374ba4b7e00dc59b019 501 PIRSF PIRSF039088 1 501 7.9E-236 T 22-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SII_RS02390 71115999a3099374ba4b7e00dc59b019 501 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 3 496 1.7E-244 T 22-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SII_RS02390 71115999a3099374ba4b7e00dc59b019 501 Gene3D G3DSA:3.40.50.300 94 371 5.5E-113 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS02390 71115999a3099374ba4b7e00dc59b019 501 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 371 494 1.1E-46 T 22-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SII_RS02390 71115999a3099374ba4b7e00dc59b019 501 Gene3D G3DSA:2.40.30.20 3 93 2.9E-34 T 22-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SII_RS02390 71115999a3099374ba4b7e00dc59b019 501 PANTHER PTHR15184 1 485 3.0E-291 T 22-04-2016 SII_RS03305 7dead5a97bc87331e53c28374312201f 117 Gene3D G3DSA:1.10.260.40 13 103 7.0E-17 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SII_RS03305 7dead5a97bc87331e53c28374312201f 117 Pfam PF01381 Helix-turn-helix 17 71 8.3E-13 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SII_RS03305 7dead5a97bc87331e53c28374312201f 117 SMART SM00530 16 71 5.8E-11 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SII_RS03305 7dead5a97bc87331e53c28374312201f 117 SUPERFAMILY SSF47413 10 75 1.1E-14 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SII_RS04010 fb17d4bf6aa06f6121bb30dbbc08159d 110 Hamap MF_00245 UPF0122 protein . 3 104 21.197 T 22-04-2016 IPR007394 Putative helix-turn-helix protein, YlxM/p13-like SII_RS04010 fb17d4bf6aa06f6121bb30dbbc08159d 110 PANTHER PTHR40083 2 110 7.3E-42 T 22-04-2016 SII_RS04010 fb17d4bf6aa06f6121bb30dbbc08159d 110 Pfam PF04297 Putative helix-turn-helix protein, YlxM / p13 like 3 101 9.0E-42 T 22-04-2016 IPR007394 Putative helix-turn-helix protein, YlxM/p13-like SII_RS04010 fb17d4bf6aa06f6121bb30dbbc08159d 110 SUPERFAMILY SSF88659 2 103 1.74E-32 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SII_RS04010 fb17d4bf6aa06f6121bb30dbbc08159d 110 Gene3D G3DSA:1.10.10.10 1 106 5.8E-41 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SII_RS08320 4dee8e206ca092bd9e123f6b81103c0f 221 SUPERFAMILY SSF51366 6 216 2.39E-36 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 SII_RS08320 4dee8e206ca092bd9e123f6b81103c0f 221 Gene3D G3DSA:3.20.20.70 5 220 4.0E-75 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SII_RS08320 4dee8e206ca092bd9e123f6b81103c0f 221 PANTHER PTHR35039:SF2 1 221 4.3E-107 T 22-04-2016 SII_RS08320 4dee8e206ca092bd9e123f6b81103c0f 221 PANTHER PTHR35039 1 221 4.3E-107 T 22-04-2016 SII_RS08320 4dee8e206ca092bd9e123f6b81103c0f 221 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 6 211 3.5E-31 T 22-04-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 SII_RS08320 4dee8e206ca092bd9e123f6b81103c0f 221 SMART SM00934 7 212 1.6E-29 T 22-04-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 SII_RS06830 9f7bd9ff7c4d20e691eaa3bc2497e6c5 447 Gene3D G3DSA:3.40.50.300 205 360 1.3E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS06830 9f7bd9ff7c4d20e691eaa3bc2497e6c5 447 Gene3D G3DSA:3.40.50.300 2 204 4.5E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS06830 9f7bd9ff7c4d20e691eaa3bc2497e6c5 447 Hamap MF_01494 DEAD-box ATP-dependent RNA helicase CshB [cshB]. 1 435 51.071 T 22-04-2016 IPR030881 DEAD-box ATP-dependent RNA helicase CshB GO:0004386|GO:0009409 SII_RS06830 9f7bd9ff7c4d20e691eaa3bc2497e6c5 447 SUPERFAMILY SSF52540 69 357 3.03E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS06830 9f7bd9ff7c4d20e691eaa3bc2497e6c5 447 Pfam PF00271 Helicase conserved C-terminal domain 232 337 1.5E-24 T 22-04-2016 IPR001650 Helicase, C-terminal SII_RS06830 9f7bd9ff7c4d20e691eaa3bc2497e6c5 447 Pfam PF00270 DEAD/DEAH box helicase 25 191 6.0E-40 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 SII_RS06830 9f7bd9ff7c4d20e691eaa3bc2497e6c5 447 PANTHER PTHR24031:SF280 1 440 3.6E-218 T 22-04-2016 SII_RS06830 9f7bd9ff7c4d20e691eaa3bc2497e6c5 447 PANTHER PTHR24031 1 440 3.6E-218 T 22-04-2016 SII_RS06830 9f7bd9ff7c4d20e691eaa3bc2497e6c5 447 SMART SM00490 256 337 3.7E-26 T 22-04-2016 IPR001650 Helicase, C-terminal SII_RS06830 9f7bd9ff7c4d20e691eaa3bc2497e6c5 447 SMART SM00487 20 220 1.1E-47 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain SII_RS01950 7d874aabc2d1b7cba0ec43fdb0809937 755 SMART SM00382 478 649 1.7E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain SII_RS01950 7d874aabc2d1b7cba0ec43fdb0809937 755 SMART SM00382 149 289 5.3E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain SII_RS01950 7d874aabc2d1b7cba0ec43fdb0809937 755 Gene3D G3DSA:3.40.50.300 434 658 1.6E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS01950 7d874aabc2d1b7cba0ec43fdb0809937 755 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 589 603 1.6E-37 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 SII_RS01950 7d874aabc2d1b7cba0ec43fdb0809937 755 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 482 500 1.6E-37 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 SII_RS01950 7d874aabc2d1b7cba0ec43fdb0809937 755 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 527 545 1.6E-37 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 SII_RS01950 7d874aabc2d1b7cba0ec43fdb0809937 755 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 556 574 1.6E-37 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 SII_RS01950 7d874aabc2d1b7cba0ec43fdb0809937 755 PANTHER PTHR11638 101 754 0.0 T 22-04-2016 SII_RS01950 7d874aabc2d1b7cba0ec43fdb0809937 755 SUPERFAMILY SSF52540 111 363 3.85E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS01950 7d874aabc2d1b7cba0ec43fdb0809937 755 SUPERFAMILY SSF52540 427 722 1.18E-75 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS01950 7d874aabc2d1b7cba0ec43fdb0809937 755 PANTHER PTHR11638:SF117 101 754 0.0 T 22-04-2016 SII_RS01950 7d874aabc2d1b7cba0ec43fdb0809937 755 SMART SM01086 648 736 1.2E-29 T 22-04-2016 IPR019489 Clp ATPase, C-terminal SII_RS01950 7d874aabc2d1b7cba0ec43fdb0809937 755 Gene3D G3DSA:1.10.8.60 293 365 4.1E-31 T 22-04-2016 SII_RS01950 7d874aabc2d1b7cba0ec43fdb0809937 755 Pfam PF02151 UvrB/uvrC motif 372 398 1.5E-6 T 22-04-2016 IPR001943 UVR domain GO:0005515 SII_RS01950 7d874aabc2d1b7cba0ec43fdb0809937 755 Pfam PF07724 AAA domain (Cdc48 subfamily) 477 640 5.8E-49 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 SII_RS01950 7d874aabc2d1b7cba0ec43fdb0809937 755 Gene3D G3DSA:1.10.8.60 659 747 9.1E-28 T 22-04-2016 SII_RS01950 7d874aabc2d1b7cba0ec43fdb0809937 755 Gene3D G3DSA:3.40.50.300 112 292 1.2E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS01950 7d874aabc2d1b7cba0ec43fdb0809937 755 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 245 257 - T 22-04-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 SII_RS01950 7d874aabc2d1b7cba0ec43fdb0809937 755 Gene3D G3DSA:4.10.860.10 376 401 5.4E-4 T 22-04-2016 IPR001943 UVR domain GO:0005515 SII_RS01950 7d874aabc2d1b7cba0ec43fdb0809937 755 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 154 273 1.3E-13 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 SII_RS01950 7d874aabc2d1b7cba0ec43fdb0809937 755 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 648 722 4.6E-23 T 22-04-2016 IPR019489 Clp ATPase, C-terminal SII_RS01950 7d874aabc2d1b7cba0ec43fdb0809937 755 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 512 530 - T 22-04-2016 IPR028299 ClpA/B, conserved site 2 SII_RS08545 ec776b0b58cfc71934b9f4d227f41915 338 SUPERFAMILY SSF51735 5 182 2.3E-55 T 22-04-2016 IPR016040 NAD(P)-binding domain SII_RS08545 ec776b0b58cfc71934b9f4d227f41915 338 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 201 225 2.9E-42 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 SII_RS08545 ec776b0b58cfc71934b9f4d227f41915 338 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 136 156 2.9E-42 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 SII_RS08545 ec776b0b58cfc71934b9f4d227f41915 338 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 176 200 2.9E-42 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 SII_RS08545 ec776b0b58cfc71934b9f4d227f41915 338 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 8 25 2.9E-42 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 SII_RS08545 ec776b0b58cfc71934b9f4d227f41915 338 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 58 85 2.9E-42 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 SII_RS08545 ec776b0b58cfc71934b9f4d227f41915 338 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 241 258 2.9E-42 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 SII_RS08545 ec776b0b58cfc71934b9f4d227f41915 338 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 6 163 1.8E-51 T 22-04-2016 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 SII_RS08545 ec776b0b58cfc71934b9f4d227f41915 338 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 4 325 35.899 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 SII_RS08545 ec776b0b58cfc71934b9f4d227f41915 338 Gene3D G3DSA:3.40.50.720 1 186 1.5E-59 T 22-04-2016 IPR016040 NAD(P)-binding domain SII_RS08545 ec776b0b58cfc71934b9f4d227f41915 338 Gene3D G3DSA:1.10.1040.10 187 329 1.1E-56 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 SII_RS08545 ec776b0b58cfc71934b9f4d227f41915 338 PANTHER PTHR11728 1 337 9.8E-136 T 22-04-2016 SII_RS08545 ec776b0b58cfc71934b9f4d227f41915 338 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 183 323 1.6E-51 T 22-04-2016 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 SII_RS08545 ec776b0b58cfc71934b9f4d227f41915 338 PIRSF PIRSF000114 1 335 7.0E-103 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 SII_RS08545 ec776b0b58cfc71934b9f4d227f41915 338 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 191 212 - T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 SII_RS08545 ec776b0b58cfc71934b9f4d227f41915 338 SUPERFAMILY SSF48179 182 334 6.63E-54 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 SII_RS06645 c1560ba80c7ad218e7651e211f9f73e8 459 Gene3D G3DSA:2.40.50.140 2 79 1.0E-25 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SII_RS06645 c1560ba80c7ad218e7651e211f9f73e8 459 PANTHER PTHR11061 3 454 1.1E-273 T 22-04-2016 SII_RS06645 c1560ba80c7ad218e7651e211f9f73e8 459 Gene3D G3DSA:3.40.50.150 247 448 4.4E-58 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SII_RS06645 c1560ba80c7ad218e7651e211f9f73e8 459 Pfam PF01938 TRAM domain 5 59 2.4E-5 T 22-04-2016 IPR002792 TRAM domain SII_RS06645 c1560ba80c7ad218e7651e211f9f73e8 459 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 381 412 - T 22-04-2016 IPR030390 RNA methyltransferase TrmA, active site SII_RS06645 c1560ba80c7ad218e7651e211f9f73e8 459 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 432 442 - T 22-04-2016 IPR030391 RNA methyltransferase TrmA, conserved site SII_RS06645 c1560ba80c7ad218e7651e211f9f73e8 459 SUPERFAMILY SSF53335 67 449 1.79E-72 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SII_RS06645 c1560ba80c7ad218e7651e211f9f73e8 459 PANTHER PTHR11061:SF35 3 454 1.1E-273 T 22-04-2016 SII_RS06645 c1560ba80c7ad218e7651e211f9f73e8 459 SUPERFAMILY SSF50249 3 59 6.28E-12 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SII_RS06645 c1560ba80c7ad218e7651e211f9f73e8 459 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 17 442 5.3E-132 T 22-04-2016 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 SII_RS06645 c1560ba80c7ad218e7651e211f9f73e8 459 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 272 449 5.9E-17 T 22-04-2016 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 SII_RS05170 cc32af5b1b3277a0b3664a94b8759213 594 SUPERFAMILY SSF52540 97 557 8.78E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS05170 cc32af5b1b3277a0b3664a94b8759213 594 Pfam PF02534 Type IV secretory system Conjugative DNA transfer 141 549 1.5E-59 T 22-04-2016 IPR003688 Type IV secretion system protein TraG/VirD4 GO:0009291|GO:0016020 SII_RS05170 cc32af5b1b3277a0b3664a94b8759213 594 Gene3D G3DSA:3.40.50.300 92 217 2.5E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS05170 cc32af5b1b3277a0b3664a94b8759213 594 Gene3D G3DSA:3.40.50.300 346 558 2.5E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS04500 95c34ae5d0704e6e97a82e38d8616cd8 173 PANTHER PTHR11608 1 173 8.0E-85 T 22-04-2016 SII_RS04500 95c34ae5d0704e6e97a82e38d8616cd8 173 SUPERFAMILY SSF53271 5 168 2.88E-36 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like SII_RS04500 95c34ae5d0704e6e97a82e38d8616cd8 173 Hamap MF_01219 Bifunctional protein PyrR [pyrR]. 3 171 35.624 T 22-04-2016 IPR023050 Bifunctional protein PyrR KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 SII_RS04500 95c34ae5d0704e6e97a82e38d8616cd8 173 Gene3D G3DSA:3.40.50.2020 3 167 2.5E-46 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like SII_RS04500 95c34ae5d0704e6e97a82e38d8616cd8 173 Pfam PF00156 Phosphoribosyl transferase domain 4 144 1.4E-20 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 SII_RS04770 175a4c23b960fb0949de0022a6e2dd16 494 SUPERFAMILY SSF52540 291 490 9.0E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS04770 175a4c23b960fb0949de0022a6e2dd16 494 SMART SM00963 193 274 2.1E-20 T 22-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 SII_RS04770 175a4c23b960fb0949de0022a6e2dd16 494 Gene3D G3DSA:1.20.120.140 218 303 3.1E-25 T 22-04-2016 SII_RS04770 175a4c23b960fb0949de0022a6e2dd16 494 Pfam PF00448 SRP54-type protein, GTPase domain 291 490 7.3E-75 T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 SII_RS04770 175a4c23b960fb0949de0022a6e2dd16 494 SMART SM00962 290 491 2.3E-109 T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 SII_RS04770 175a4c23b960fb0949de0022a6e2dd16 494 SUPERFAMILY SSF47364 196 276 2.88E-17 T 22-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 SII_RS04770 175a4c23b960fb0949de0022a6e2dd16 494 SMART SM00382 289 467 4.1E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain SII_RS04770 175a4c23b960fb0949de0022a6e2dd16 494 PANTHER PTHR11564 183 491 6.5E-130 T 22-04-2016 SII_RS04770 175a4c23b960fb0949de0022a6e2dd16 494 Gene3D G3DSA:3.40.50.300 304 491 4.8E-75 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS04770 175a4c23b960fb0949de0022a6e2dd16 494 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 464 477 - T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 SII_RS04770 175a4c23b960fb0949de0022a6e2dd16 494 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 218 490 2.9E-106 T 22-04-2016 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 SII_RS04770 175a4c23b960fb0949de0022a6e2dd16 494 Pfam PF02881 SRP54-type protein, helical bundle domain 204 270 6.4E-12 T 22-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 SII_RS04770 175a4c23b960fb0949de0022a6e2dd16 494 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 217 491 61.265 T 22-04-2016 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 SII_RS04770 175a4c23b960fb0949de0022a6e2dd16 494 PANTHER PTHR11564:SF16 183 491 6.5E-130 T 22-04-2016 SII_RS07175 59016c5e5b31651239b4c6652f37605c 329 Gene3D G3DSA:3.40.35.10 168 327 4.1E-64 T 22-04-2016 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 SII_RS07175 59016c5e5b31651239b4c6652f37605c 329 PANTHER PTHR33799:SF7 3 329 3.7E-220 T 22-04-2016 SII_RS07175 59016c5e5b31651239b4c6652f37605c 329 Gene3D G3DSA:3.40.50.510 1 139 8.1E-50 T 22-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 SII_RS07175 59016c5e5b31651239b4c6652f37605c 329 SUPERFAMILY SSF53062 1 137 2.09E-36 T 22-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 SII_RS07175 59016c5e5b31651239b4c6652f37605c 329 Pfam PF03830 PTS system sorbose subfamily IIB component 169 316 4.5E-51 T 22-04-2016 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 SII_RS07175 59016c5e5b31651239b4c6652f37605c 329 SUPERFAMILY SSF52728 168 327 2.35E-54 T 22-04-2016 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 SII_RS07175 59016c5e5b31651239b4c6652f37605c 329 PANTHER PTHR33799 3 329 3.7E-220 T 22-04-2016 SII_RS07175 59016c5e5b31651239b4c6652f37605c 329 Pfam PF03610 PTS system fructose IIA component 4 122 4.7E-36 T 22-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 SII_RS01510 3b10d6c5499be3bad436c4ee2da2d20b 941 PANTHER PTHR32282:SF2 1 941 0.0 T 22-04-2016 SII_RS01510 3b10d6c5499be3bad436c4ee2da2d20b 941 Pfam PF00005 ABC transporter 624 860 1.4E-10 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SII_RS01510 3b10d6c5499be3bad436c4ee2da2d20b 941 Gene3D G3DSA:1.10.8.280 284 405 3.4E-41 T 22-04-2016 SII_RS01510 3b10d6c5499be3bad436c4ee2da2d20b 941 Gene3D G3DSA:1.20.1580.10 694 820 1.9E-57 T 22-04-2016 SII_RS01510 3b10d6c5499be3bad436c4ee2da2d20b 941 ProSitePatterns PS00211 ABC transporters family signature. 830 844 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SII_RS01510 3b10d6c5499be3bad436c4ee2da2d20b 941 ProSitePatterns PS00211 ABC transporters family signature. 489 503 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SII_RS01510 3b10d6c5499be3bad436c4ee2da2d20b 941 Hamap MF_00205 UvrABC system protein A [uvrA]. 2 940 22.749 T 22-04-2016 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 SII_RS01510 3b10d6c5499be3bad436c4ee2da2d20b 941 SMART SM00382 633 908 6.2E-5 T 22-04-2016 IPR003593 AAA+ ATPase domain SII_RS01510 3b10d6c5499be3bad436c4ee2da2d20b 941 Gene3D G3DSA:3.30.1490.20 201 248 4.2E-30 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 SII_RS01510 3b10d6c5499be3bad436c4ee2da2d20b 941 Gene3D G3DSA:3.30.1490.20 132 154 4.2E-30 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 SII_RS01510 3b10d6c5499be3bad436c4ee2da2d20b 941 SUPERFAMILY SSF52540 11 205 9.7E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS01510 3b10d6c5499be3bad436c4ee2da2d20b 941 SUPERFAMILY SSF52540 432 571 9.7E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS01510 3b10d6c5499be3bad436c4ee2da2d20b 941 Gene3D G3DSA:3.40.50.300 480 599 2.4E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS01510 3b10d6c5499be3bad436c4ee2da2d20b 941 Gene3D G3DSA:3.40.50.300 821 939 1.3E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS01510 3b10d6c5499be3bad436c4ee2da2d20b 941 Gene3D G3DSA:3.40.50.300 614 669 1.3E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS01510 3b10d6c5499be3bad436c4ee2da2d20b 941 Gene3D G3DSA:3.40.50.300 7 90 2.4E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS01510 3b10d6c5499be3bad436c4ee2da2d20b 941 PANTHER PTHR32282 1 941 0.0 T 22-04-2016 SII_RS01510 3b10d6c5499be3bad436c4ee2da2d20b 941 SUPERFAMILY SSF52540 615 914 8.05E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS01510 3b10d6c5499be3bad436c4ee2da2d20b 941 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 4 925 0.0 T 22-04-2016 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 SII_RS01510 3b10d6c5499be3bad436c4ee2da2d20b 941 Gene3D G3DSA:1.20.1580.10 92 130 2.2E-49 T 22-04-2016 SII_RS01510 3b10d6c5499be3bad436c4ee2da2d20b 941 Gene3D G3DSA:1.20.1580.10 406 479 2.2E-49 T 22-04-2016 SII_RS01510 3b10d6c5499be3bad436c4ee2da2d20b 941 Gene3D G3DSA:1.20.1580.10 249 282 2.2E-49 T 22-04-2016 SII_RS01980 6966fe0eee76c48cb2cece9027c469f1 462 Pfam PF02687 FtsX-like permease family 306 452 5.1E-20 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 SII_RS01980 6966fe0eee76c48cb2cece9027c469f1 462 PANTHER PTHR30489 7 93 9.2E-28 T 22-04-2016 SII_RS01980 6966fe0eee76c48cb2cece9027c469f1 462 PANTHER PTHR30489 410 459 9.2E-28 T 22-04-2016 SII_RS01980 6966fe0eee76c48cb2cece9027c469f1 462 PANTHER PTHR30489 109 391 9.2E-28 T 22-04-2016 SII_RS04030 ede1c5487746fb64ae8edb98becf5195 200 Gene3D G3DSA:1.10.530.10 18 149 2.9E-6 T 22-04-2016 SII_RS04030 ede1c5487746fb64ae8edb98becf5195 200 Pfam PF13702 Lysozyme-like 29 190 9.0E-58 T 22-04-2016 SII_RS04030 ede1c5487746fb64ae8edb98becf5195 200 SUPERFAMILY SSF53955 33 149 6.75E-10 T 22-04-2016 IPR023346 Lysozyme-like domain SII_RS04030 ede1c5487746fb64ae8edb98becf5195 200 PANTHER PTHR34135:SF3 1 200 2.4E-63 T 22-04-2016 SII_RS04030 ede1c5487746fb64ae8edb98becf5195 200 PANTHER PTHR34135 1 200 2.4E-63 T 22-04-2016 SII_RS03295 cc9bf12ddb0d2abf731643ee868b1f46 639 PRINTS PR01037 Tetracycline resistance protein TetO/TetQ/TetM family signature 213 235 1.5E-79 T 22-04-2016 SII_RS03295 cc9bf12ddb0d2abf731643ee868b1f46 639 PRINTS PR01037 Tetracycline resistance protein TetO/TetQ/TetM family signature 470 492 1.5E-79 T 22-04-2016 SII_RS03295 cc9bf12ddb0d2abf731643ee868b1f46 639 PRINTS PR01037 Tetracycline resistance protein TetO/TetQ/TetM family signature 267 293 1.5E-79 T 22-04-2016 SII_RS03295 cc9bf12ddb0d2abf731643ee868b1f46 639 PRINTS PR01037 Tetracycline resistance protein TetO/TetQ/TetM family signature 504 521 1.5E-79 T 22-04-2016 SII_RS03295 cc9bf12ddb0d2abf731643ee868b1f46 639 PRINTS PR01037 Tetracycline resistance protein TetO/TetQ/TetM family signature 455 469 1.5E-79 T 22-04-2016 SII_RS03295 cc9bf12ddb0d2abf731643ee868b1f46 639 PRINTS PR01037 Tetracycline resistance protein TetO/TetQ/TetM family signature 109 132 1.5E-79 T 22-04-2016 SII_RS03295 cc9bf12ddb0d2abf731643ee868b1f46 639 Pfam PF14492 Elongation Factor G, domain II 342 414 8.9E-13 T 22-04-2016 IPR009022 Elongation factor G, III-V domain SII_RS03295 cc9bf12ddb0d2abf731643ee868b1f46 639 Gene3D G3DSA:3.30.230.10 427 536 2.5E-29 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SII_RS03295 cc9bf12ddb0d2abf731643ee868b1f46 639 Pfam PF00679 Elongation factor G C-terminus 534 617 5.7E-16 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain SII_RS03295 cc9bf12ddb0d2abf731643ee868b1f46 639 SUPERFAMILY SSF54980 342 418 1.65E-15 T 22-04-2016 IPR009022 Elongation factor G, III-V domain SII_RS03295 cc9bf12ddb0d2abf731643ee868b1f46 639 PRINTS PR00315 GTP-binding elongation factor signature 51 59 1.2E-17 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SII_RS03295 cc9bf12ddb0d2abf731643ee868b1f46 639 PRINTS PR00315 GTP-binding elongation factor signature 5 18 1.2E-17 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SII_RS03295 cc9bf12ddb0d2abf731643ee868b1f46 639 PRINTS PR00315 GTP-binding elongation factor signature 71 81 1.2E-17 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SII_RS03295 cc9bf12ddb0d2abf731643ee868b1f46 639 PRINTS PR00315 GTP-binding elongation factor signature 123 132 1.2E-17 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SII_RS03295 cc9bf12ddb0d2abf731643ee868b1f46 639 PRINTS PR00315 GTP-binding elongation factor signature 87 98 1.2E-17 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SII_RS03295 cc9bf12ddb0d2abf731643ee868b1f46 639 PANTHER PTHR23115 213 612 4.1E-106 T 22-04-2016 SII_RS03295 cc9bf12ddb0d2abf731643ee868b1f46 639 PANTHER PTHR23115 5 180 4.1E-106 T 22-04-2016 SII_RS03295 cc9bf12ddb0d2abf731643ee868b1f46 639 PANTHER PTHR23115:SF66 213 612 4.1E-106 T 22-04-2016 SII_RS03295 cc9bf12ddb0d2abf731643ee868b1f46 639 PANTHER PTHR23115:SF66 5 180 4.1E-106 T 22-04-2016 SII_RS03295 cc9bf12ddb0d2abf731643ee868b1f46 639 Gene3D G3DSA:3.40.50.300 2 153 8.6E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS03295 cc9bf12ddb0d2abf731643ee868b1f46 639 Gene3D G3DSA:3.40.50.300 176 240 1.1E-4 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS03295 cc9bf12ddb0d2abf731643ee868b1f46 639 SUPERFAMILY SSF54980 535 619 4.6E-15 T 22-04-2016 IPR009022 Elongation factor G, III-V domain SII_RS03295 cc9bf12ddb0d2abf731643ee868b1f46 639 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 44 59 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site SII_RS03295 cc9bf12ddb0d2abf731643ee868b1f46 639 SUPERFAMILY SSF52540 2 236 8.39E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS03295 cc9bf12ddb0d2abf731643ee868b1f46 639 Gene3D G3DSA:3.30.70.870 342 417 2.1E-20 T 22-04-2016 SII_RS03295 cc9bf12ddb0d2abf731643ee868b1f46 639 Gene3D G3DSA:2.40.30.10 247 339 8.1E-17 T 22-04-2016 SII_RS03295 cc9bf12ddb0d2abf731643ee868b1f46 639 Pfam PF00009 Elongation factor Tu GTP binding domain 2 237 1.3E-59 T 22-04-2016 SII_RS03295 cc9bf12ddb0d2abf731643ee868b1f46 639 Pfam PF03764 Elongation factor G, domain IV 416 531 4.1E-23 T 22-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 SII_RS03295 cc9bf12ddb0d2abf731643ee868b1f46 639 SMART SM00889 417 532 3.6E-14 T 22-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 SII_RS03295 cc9bf12ddb0d2abf731643ee868b1f46 639 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 1 171 6.8E-49 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 SII_RS03295 cc9bf12ddb0d2abf731643ee868b1f46 639 Gene3D G3DSA:3.30.70.240 537 617 1.1E-12 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain SII_RS03295 cc9bf12ddb0d2abf731643ee868b1f46 639 SUPERFAMILY SSF54211 416 532 1.02E-21 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SII_RS03295 cc9bf12ddb0d2abf731643ee868b1f46 639 SUPERFAMILY SSF50447 223 317 6.18E-15 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain SII_RS02045 81e9a75e00db4a59a1d9e0a50b88318a 250 PANTHER PTHR24220 2 249 8.2E-133 T 22-04-2016 SII_RS02045 81e9a75e00db4a59a1d9e0a50b88318a 250 SUPERFAMILY SSF52540 2 226 2.2E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS02045 81e9a75e00db4a59a1d9e0a50b88318a 250 Gene3D G3DSA:3.40.50.300 2 228 3.7E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS02045 81e9a75e00db4a59a1d9e0a50b88318a 250 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SII_RS02045 81e9a75e00db4a59a1d9e0a50b88318a 250 Pfam PF00005 ABC transporter 16 163 3.3E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SII_RS02045 81e9a75e00db4a59a1d9e0a50b88318a 250 SMART SM00382 25 212 8.3E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain SII_RS02045 81e9a75e00db4a59a1d9e0a50b88318a 250 PANTHER PTHR24220:SF471 2 249 8.2E-133 T 22-04-2016 SII_RS03780 dae3457e3a14575ef5eafe3ac10dce2c 425 Pfam PF03061 Thioesterase superfamily 342 410 1.6E-6 T 22-04-2016 IPR006683 Thioesterase domain SII_RS03780 dae3457e3a14575ef5eafe3ac10dce2c 425 SUPERFAMILY SSF54637 309 423 4.11E-13 T 22-04-2016 IPR029069 HotDog domain SII_RS03780 dae3457e3a14575ef5eafe3ac10dce2c 425 Gene3D G3DSA:3.10.129.10 313 424 8.4E-10 T 22-04-2016 IPR029069 HotDog domain SII_RS03780 dae3457e3a14575ef5eafe3ac10dce2c 425 Pfam PF00571 CBS domain 201 240 2.8E-6 T 22-04-2016 IPR000644 CBS domain SII_RS03780 dae3457e3a14575ef5eafe3ac10dce2c 425 Pfam PF00571 CBS domain 253 304 2.2E-6 T 22-04-2016 IPR000644 CBS domain SII_RS03780 dae3457e3a14575ef5eafe3ac10dce2c 425 Pfam PF07085 DRTGG domain 74 176 3.7E-29 T 22-04-2016 IPR010766 DRTGG KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 SII_RS03780 dae3457e3a14575ef5eafe3ac10dce2c 425 PANTHER PTHR11911 201 307 2.2E-18 T 22-04-2016 SII_RS03780 dae3457e3a14575ef5eafe3ac10dce2c 425 SMART SM00116 257 305 0.91 T 22-04-2016 IPR000644 CBS domain SII_RS03780 dae3457e3a14575ef5eafe3ac10dce2c 425 SMART SM00116 198 246 0.17 T 22-04-2016 IPR000644 CBS domain SII_RS03780 dae3457e3a14575ef5eafe3ac10dce2c 425 Pfam PF00392 Bacterial regulatory proteins, gntR family 13 57 1.0E-5 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SII_RS03780 dae3457e3a14575ef5eafe3ac10dce2c 425 Gene3D G3DSA:3.10.580.10 209 305 3.6E-20 T 22-04-2016 SII_RS03780 dae3457e3a14575ef5eafe3ac10dce2c 425 SUPERFAMILY SSF54631 187 310 4.8E-25 T 22-04-2016 SII_RS03780 dae3457e3a14575ef5eafe3ac10dce2c 425 SUPERFAMILY SSF46785 10 58 4.4E-7 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SII_RS03780 dae3457e3a14575ef5eafe3ac10dce2c 425 Gene3D G3DSA:3.40.1390.20 65 208 1.3E-42 T 22-04-2016 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like SII_RS03780 dae3457e3a14575ef5eafe3ac10dce2c 425 Gene3D G3DSA:1.10.10.10 12 58 6.2E-9 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SII_RS03780 dae3457e3a14575ef5eafe3ac10dce2c 425 SUPERFAMILY SSF75138 70 181 3.27E-27 T 22-04-2016 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like SII_RS05645 97e38c5c22b8ed4456b130a75d394ec7 184 PANTHER PTHR30055:SF55 1 180 5.9E-23 T 22-04-2016 SII_RS05645 97e38c5c22b8ed4456b130a75d394ec7 184 SUPERFAMILY SSF46689 5 69 1.03E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SII_RS05645 97e38c5c22b8ed4456b130a75d394ec7 184 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 57 2.4E-5 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SII_RS05645 97e38c5c22b8ed4456b130a75d394ec7 184 PANTHER PTHR30055 1 180 5.9E-23 T 22-04-2016 SII_RS05645 97e38c5c22b8ed4456b130a75d394ec7 184 Gene3D G3DSA:1.10.357.10 5 177 1.4E-21 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 SII_RS03265 cb27df98014aa1e49794f47b7d88aea4 415 PANTHER PTHR33498 5 410 1.1E-48 T 22-04-2016 SII_RS03265 cb27df98014aa1e49794f47b7d88aea4 415 PANTHER PTHR33498:SF1 5 410 1.1E-48 T 22-04-2016 SII_RS03265 cb27df98014aa1e49794f47b7d88aea4 415 Pfam PF01610 Transposase 163 410 2.3E-50 T 22-04-2016 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain SII_RS03265 cb27df98014aa1e49794f47b7d88aea4 415 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 50 93 1.7E-10 T 22-04-2016 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger SII_RS05435 e708f4281b6360c9773a68a70c590f50 246 SMART SM00563 36 146 8.0E-29 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 SII_RS05435 e708f4281b6360c9773a68a70c590f50 246 Pfam PF01553 Acyltransferase 21 144 1.4E-20 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 SII_RS05435 e708f4281b6360c9773a68a70c590f50 246 SUPERFAMILY SSF69593 3 200 4.05E-53 T 22-04-2016 SII_RS05435 e708f4281b6360c9773a68a70c590f50 246 PANTHER PTHR10434:SF21 1 196 1.1E-60 T 22-04-2016 SII_RS05435 e708f4281b6360c9773a68a70c590f50 246 PANTHER PTHR10434 1 196 1.1E-60 T 22-04-2016 SII_RS05435 e708f4281b6360c9773a68a70c590f50 246 Gene3D G3DSA:3.40.1130.10 4 201 4.1E-21 T 22-04-2016 SII_RS01960 36a17bf5d32291d7836a8c49d5d79f85 158 SMART SM00899 1 71 3.8E-4 T 22-04-2016 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 SII_RS01960 36a17bf5d32291d7836a8c49d5d79f85 158 SMART SM00899 79 151 4.7E-23 T 22-04-2016 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 SII_RS01960 36a17bf5d32291d7836a8c49d5d79f85 158 SUPERFAMILY SSF50037 82 150 8.47E-19 T 22-04-2016 IPR008988 Transcriptional repressor, C-terminal SII_RS01960 36a17bf5d32291d7836a8c49d5d79f85 158 PANTHER PTHR33238 80 155 3.2E-21 T 22-04-2016 SII_RS01960 36a17bf5d32291d7836a8c49d5d79f85 158 Pfam PF04023 FeoA domain 80 149 1.3E-16 T 22-04-2016 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 SII_RS01960 36a17bf5d32291d7836a8c49d5d79f85 158 Pfam PF04023 FeoA domain 1 67 7.5E-5 T 22-04-2016 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 SII_RS01960 36a17bf5d32291d7836a8c49d5d79f85 158 SUPERFAMILY SSF50037 3 69 1.26E-7 T 22-04-2016 IPR008988 Transcriptional repressor, C-terminal SII_RS02365 602bf70d15f6283c53dff44079406c79 799 PIRSF PIRSF000460 2 799 4.0E-208 T 22-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 SII_RS02365 602bf70d15f6283c53dff44079406c79 799 Gene3D G3DSA:3.40.50.2000 467 780 4.9E-125 T 22-04-2016 SII_RS02365 602bf70d15f6283c53dff44079406c79 799 Pfam PF00343 Carbohydrate phosphorylase 94 796 2.6E-288 T 22-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 SII_RS02365 602bf70d15f6283c53dff44079406c79 799 Gene3D G3DSA:3.40.50.2000 2 466 7.5E-167 T 22-04-2016 SII_RS02365 602bf70d15f6283c53dff44079406c79 799 PANTHER PTHR11468:SF3 24 797 0.0 T 22-04-2016 SII_RS02365 602bf70d15f6283c53dff44079406c79 799 SUPERFAMILY SSF53756 3 797 3.14E-277 T 22-04-2016 SII_RS02365 602bf70d15f6283c53dff44079406c79 799 PANTHER PTHR11468 24 797 0.0 T 22-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 SII_RS02365 602bf70d15f6283c53dff44079406c79 799 TIGRFAM TIGR02093 P_ylase: glycogen/starch/alpha-glucan phosphorylases 5 796 0.0 T 22-04-2016 IPR011833 Glycogen/starch/alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 SII_RS04745 dd3810181281a2c5160312bc3425dd51 639 SUPERFAMILY SSF56300 37 61 1.61E-8 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like SII_RS04745 dd3810181281a2c5160312bc3425dd51 639 SUPERFAMILY SSF56300 186 242 1.61E-8 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like SII_RS04745 dd3810181281a2c5160312bc3425dd51 639 PIRSF PIRSF000906 1 639 8.6E-258 T 22-04-2016 IPR009164 Fructose-1,6-bisphosphatase class 3 GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 SII_RS04745 dd3810181281a2c5160312bc3425dd51 639 Gene3D G3DSA:3.60.21.10 173 252 4.6E-7 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like SII_RS04745 dd3810181281a2c5160312bc3425dd51 639 Gene3D G3DSA:3.60.21.10 383 424 4.6E-7 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like SII_RS04745 dd3810181281a2c5160312bc3425dd51 639 Gene3D G3DSA:3.60.21.10 489 557 4.6E-7 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like SII_RS04745 dd3810181281a2c5160312bc3425dd51 639 Hamap MF_01854 Fructose-1,6-bisphosphatase class 3 [fbp]. 1 639 34.714 T 22-04-2016 IPR009164 Fructose-1,6-bisphosphatase class 3 GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 SII_RS04745 dd3810181281a2c5160312bc3425dd51 639 SUPERFAMILY SSF56300 185 232 7.12E-8 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like SII_RS04745 dd3810181281a2c5160312bc3425dd51 639 SUPERFAMILY SSF56300 385 415 7.12E-8 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like SII_RS04745 dd3810181281a2c5160312bc3425dd51 639 SUPERFAMILY SSF56300 510 585 7.12E-8 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like SII_RS04745 dd3810181281a2c5160312bc3425dd51 639 Pfam PF06874 Firmicute fructose-1,6-bisphosphatase 4 637 1.6E-253 T 22-04-2016 IPR009164 Fructose-1,6-bisphosphatase class 3 GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 SII_RS01320 ed30ebe9ea4416c911497c94eb0fbfa9 479 PANTHER PTHR10353 3 479 2.6E-289 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 SII_RS01320 ed30ebe9ea4416c911497c94eb0fbfa9 479 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 8 22 - T 22-04-2016 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site SII_RS01320 ed30ebe9ea4416c911497c94eb0fbfa9 479 SUPERFAMILY SSF51445 2 474 3.48E-164 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily SII_RS01320 ed30ebe9ea4416c911497c94eb0fbfa9 479 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 368 376 - T 22-04-2016 IPR018120 Glycoside hydrolase family 1, active site SII_RS01320 ed30ebe9ea4416c911497c94eb0fbfa9 479 PANTHER PTHR10353:SF35 3 479 2.6E-289 T 22-04-2016 SII_RS01320 ed30ebe9ea4416c911497c94eb0fbfa9 479 PRINTS PR00131 Glycosyl hydrolase family 1 signature 438 450 8.0E-17 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 SII_RS01320 ed30ebe9ea4416c911497c94eb0fbfa9 479 PRINTS PR00131 Glycosyl hydrolase family 1 signature 368 376 8.0E-17 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 SII_RS01320 ed30ebe9ea4416c911497c94eb0fbfa9 479 PRINTS PR00131 Glycosyl hydrolase family 1 signature 392 403 8.0E-17 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 SII_RS01320 ed30ebe9ea4416c911497c94eb0fbfa9 479 PRINTS PR00131 Glycosyl hydrolase family 1 signature 302 316 8.0E-17 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 SII_RS01320 ed30ebe9ea4416c911497c94eb0fbfa9 479 PRINTS PR00131 Glycosyl hydrolase family 1 signature 413 430 8.0E-17 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 SII_RS01320 ed30ebe9ea4416c911497c94eb0fbfa9 479 Pfam PF00232 Glycosyl hydrolase family 1 3 473 6.7E-138 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 SII_RS01320 ed30ebe9ea4416c911497c94eb0fbfa9 479 Gene3D G3DSA:3.20.20.80 2 475 3.2E-154 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 SII_RS07395 4c37c7f0b61950d37eb3296b3943a742 348 Gene3D G3DSA:3.40.50.720 173 292 9.9E-36 T 22-04-2016 IPR016040 NAD(P)-binding domain SII_RS07395 4c37c7f0b61950d37eb3296b3943a742 348 PANTHER PTHR11695:SF38 15 348 4.9E-112 T 22-04-2016 SII_RS07395 4c37c7f0b61950d37eb3296b3943a742 348 SMART SM00829 11 268 5.3E-4 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 SII_RS07395 4c37c7f0b61950d37eb3296b3943a742 348 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 27 141 2.2E-24 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 SII_RS07395 4c37c7f0b61950d37eb3296b3943a742 348 Pfam PF00107 Zinc-binding dehydrogenase 181 306 2.7E-23 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 SII_RS07395 4c37c7f0b61950d37eb3296b3943a742 348 PANTHER PTHR11695 15 348 4.9E-112 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 SII_RS07395 4c37c7f0b61950d37eb3296b3943a742 348 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 72 86 - T 22-04-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 SII_RS07395 4c37c7f0b61950d37eb3296b3943a742 348 SUPERFAMILY SSF51735 145 311 3.94E-36 T 22-04-2016 IPR016040 NAD(P)-binding domain SII_RS07395 4c37c7f0b61950d37eb3296b3943a742 348 Gene3D G3DSA:3.90.180.10 2 172 4.1E-51 T 22-04-2016 IPR011032 GroES-like SII_RS07395 4c37c7f0b61950d37eb3296b3943a742 348 SUPERFAMILY SSF50129 3 180 1.67E-47 T 22-04-2016 IPR011032 GroES-like SII_RS06290 204962944c1e489fdabb56f4e16df80d 212 ProSitePatterns PS01331 Thymidylate kinase signature. 94 106 - T 22-04-2016 IPR018095 Thymidylate kinase, conserved site GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 SII_RS06290 204962944c1e489fdabb56f4e16df80d 212 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 1 197 2.3E-55 T 22-04-2016 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 SII_RS06290 204962944c1e489fdabb56f4e16df80d 212 PANTHER PTHR10344 1 212 2.5E-68 T 22-04-2016 SII_RS06290 204962944c1e489fdabb56f4e16df80d 212 Gene3D G3DSA:3.40.50.300 3 209 9.9E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS06290 204962944c1e489fdabb56f4e16df80d 212 Pfam PF02223 Thymidylate kinase 9 197 2.4E-48 T 22-04-2016 SII_RS06290 204962944c1e489fdabb56f4e16df80d 212 Hamap MF_00165 Thymidylate kinase [tmk]. 5 208 30.658 T 22-04-2016 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 SII_RS06290 204962944c1e489fdabb56f4e16df80d 212 SUPERFAMILY SSF52540 1 209 2.74E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS06000 0e96d8b2acd8a2fc6e4eef6d5af0ec9f 524 SUPERFAMILY SSF53335 13 51 3.0E-124 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SII_RS06000 0e96d8b2acd8a2fc6e4eef6d5af0ec9f 524 SUPERFAMILY SSF53335 89 522 3.0E-124 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SII_RS06000 0e96d8b2acd8a2fc6e4eef6d5af0ec9f 524 Gene3D G3DSA:3.40.50.150 206 442 1.7E-39 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SII_RS06000 0e96d8b2acd8a2fc6e4eef6d5af0ec9f 524 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 341 365 8.5E-22 T 22-04-2016 SII_RS06000 0e96d8b2acd8a2fc6e4eef6d5af0ec9f 524 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 230 244 8.5E-22 T 22-04-2016 SII_RS06000 0e96d8b2acd8a2fc6e4eef6d5af0ec9f 524 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 303 315 8.5E-22 T 22-04-2016 SII_RS06000 0e96d8b2acd8a2fc6e4eef6d5af0ec9f 524 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 204 220 8.5E-22 T 22-04-2016 SII_RS06000 0e96d8b2acd8a2fc6e4eef6d5af0ec9f 524 PANTHER PTHR30408:SF4 177 509 8.6E-127 T 22-04-2016 SII_RS06000 0e96d8b2acd8a2fc6e4eef6d5af0ec9f 524 TIGRFAM TIGR00497 hsdM: type I restriction-modification system, M subunit 10 511 3.1E-204 T 22-04-2016 IPR004546 Restriction endonuclease, type I, HsdM GO:0003677|GO:0009007|GO:0009307 SII_RS06000 0e96d8b2acd8a2fc6e4eef6d5af0ec9f 524 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 306 312 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 SII_RS06000 0e96d8b2acd8a2fc6e4eef6d5af0ec9f 524 Pfam PF12161 HsdM N-terminal domain 14 166 1.5E-18 T 22-04-2016 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain SII_RS06000 0e96d8b2acd8a2fc6e4eef6d5af0ec9f 524 PANTHER PTHR30408 177 509 8.6E-127 T 22-04-2016 SII_RS06000 0e96d8b2acd8a2fc6e4eef6d5af0ec9f 524 Pfam PF02384 N-6 DNA Methylase 180 489 2.7E-107 T 22-04-2016 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 SII_RS07090 5f6a7ef14b5ed19d246696662560b332 98 PANTHER PTHR34215 1 94 1.3E-30 T 22-04-2016 SII_RS07090 5f6a7ef14b5ed19d246696662560b332 98 Gene3D G3DSA:3.30.1230.10 2 96 1.7E-32 T 22-04-2016 IPR007393 Domain of unknown function DUF448 SII_RS07090 5f6a7ef14b5ed19d246696662560b332 98 PANTHER PTHR34215:SF1 1 94 1.3E-30 T 22-04-2016 SII_RS07090 5f6a7ef14b5ed19d246696662560b332 98 SUPERFAMILY SSF64376 5 96 7.59E-28 T 22-04-2016 IPR007393 Domain of unknown function DUF448 SII_RS07090 5f6a7ef14b5ed19d246696662560b332 98 Pfam PF04296 Protein of unknown function (DUF448) 10 83 9.6E-23 T 22-04-2016 IPR007393 Domain of unknown function DUF448 SII_RS07185 c55e9661bc0317360f8fb5759fd51c6c 303 PANTHER PTHR32502 1 303 1.2E-164 T 22-04-2016 SII_RS07185 c55e9661bc0317360f8fb5759fd51c6c 303 TIGRFAM TIGR00828 EIID-AGA: PTS system, mannose/fructose/sorbose family, IID component 6 218 1.5E-89 T 22-04-2016 IPR018405 Phosphotransferase system, mannose/fructose/sorbose family IID component, subgroup GO:0009401|GO:0016021 SII_RS07185 c55e9661bc0317360f8fb5759fd51c6c 303 PANTHER PTHR32502:SF5 1 303 1.2E-164 T 22-04-2016 SII_RS07185 c55e9661bc0317360f8fb5759fd51c6c 303 Pfam PF03613 PTS system mannose/fructose/sorbose family IID component 6 303 1.8E-116 T 22-04-2016 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 SII_RS00350 b189fed11f5a263401fbf415ad62024d 297 PANTHER PTHR32502:SF8 2 224 5.6E-46 T 22-04-2016 SII_RS00350 b189fed11f5a263401fbf415ad62024d 297 PANTHER PTHR32502 2 224 5.6E-46 T 22-04-2016 SII_RS00350 b189fed11f5a263401fbf415ad62024d 297 Pfam PF03609 PTS system sorbose-specific iic component 4 268 2.0E-61 T 22-04-2016 IPR004700 Phosphotransferase system, sorbose-specific IIC subunit GO:0009401|GO:0016021 SII_RS03545 4e2572d26fd6a748dbc6aabe8bdac3b6 436 SUPERFAMILY SSF102741 365 436 1.31E-23 T 22-04-2016 IPR015349 GTP-binding protein OBG, C-terminal GO:0000166 SII_RS03545 4e2572d26fd6a748dbc6aabe8bdac3b6 436 Gene3D G3DSA:3.40.50.300 161 344 6.2E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS03545 4e2572d26fd6a748dbc6aabe8bdac3b6 436 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 212 227 1.1E-34 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 SII_RS03545 4e2572d26fd6a748dbc6aabe8bdac3b6 436 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 184 202 1.1E-34 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 SII_RS03545 4e2572d26fd6a748dbc6aabe8bdac3b6 436 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 163 183 1.1E-34 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 SII_RS03545 4e2572d26fd6a748dbc6aabe8bdac3b6 436 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 229 247 1.1E-34 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 SII_RS03545 4e2572d26fd6a748dbc6aabe8bdac3b6 436 Hamap MF_01454 GTPase Obg [obg]. 3 338 46.841 T 22-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 SII_RS03545 4e2572d26fd6a748dbc6aabe8bdac3b6 436 TIGRFAM TIGR03595 Obg_CgtA_exten: Obg family GTPase CgtA, C-terminal extension 366 435 1.9E-26 T 22-04-2016 IPR015349 GTP-binding protein OBG, C-terminal GO:0000166 SII_RS03545 4e2572d26fd6a748dbc6aabe8bdac3b6 436 Pfam PF09269 Domain of unknown function (DUF1967) 366 434 1.8E-25 T 22-04-2016 IPR015349 GTP-binding protein OBG, C-terminal GO:0000166 SII_RS03545 4e2572d26fd6a748dbc6aabe8bdac3b6 436 PANTHER PTHR11702 4 374 4.2E-168 T 22-04-2016 SII_RS03545 4e2572d26fd6a748dbc6aabe8bdac3b6 436 Pfam PF01018 GTP1/OBG 4 159 3.0E-61 T 22-04-2016 IPR006169 GTP1/OBG domain GO:0005525 SII_RS03545 4e2572d26fd6a748dbc6aabe8bdac3b6 436 SUPERFAMILY SSF82051 3 159 3.01E-55 T 22-04-2016 IPR006169 GTP1/OBG domain GO:0005525 SII_RS03545 4e2572d26fd6a748dbc6aabe8bdac3b6 436 ProSitePatterns PS00905 GTP1/OBG family signature. 214 227 - T 22-04-2016 IPR006074 GTP1/OBG, conserved site GO:0005525 SII_RS03545 4e2572d26fd6a748dbc6aabe8bdac3b6 436 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 162 330 2.1E-13 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 SII_RS03545 4e2572d26fd6a748dbc6aabe8bdac3b6 436 SUPERFAMILY SSF52540 152 341 5.96E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS03545 4e2572d26fd6a748dbc6aabe8bdac3b6 436 PIRSF PIRSF002401 1 384 1.3E-138 T 22-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 SII_RS03545 4e2572d26fd6a748dbc6aabe8bdac3b6 436 Gene3D G3DSA:2.70.210.12 3 157 4.2E-58 T 22-04-2016 IPR006169 GTP1/OBG domain GO:0005525 SII_RS03545 4e2572d26fd6a748dbc6aabe8bdac3b6 436 PANTHER PTHR11702:SF3 4 374 4.2E-168 T 22-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 SII_RS03545 4e2572d26fd6a748dbc6aabe8bdac3b6 436 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 4 337 1.0E-139 T 22-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 SII_RS03545 4e2572d26fd6a748dbc6aabe8bdac3b6 436 Pfam PF01926 50S ribosome-binding GTPase 162 285 9.8E-23 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 SII_RS04580 89a8cde781e1a9c562e37e15511e9298 725 PANTHER PTHR30614:SF0 269 725 1.3E-279 T 22-04-2016 SII_RS04580 89a8cde781e1a9c562e37e15511e9298 725 SUPERFAMILY SSF53850 271 488 6.95E-62 T 22-04-2016 SII_RS04580 89a8cde781e1a9c562e37e15511e9298 725 Gene3D G3DSA:1.10.3720.10 503 724 6.0E-65 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SII_RS04580 89a8cde781e1a9c562e37e15511e9298 725 SMART SM00918 281 338 0.0045 T 22-04-2016 IPR019594 Ionotropic glutamate receptor, L-glutamate and glycine-binding domain GO:0004970|GO:0005234|GO:0016020 SII_RS04580 89a8cde781e1a9c562e37e15511e9298 725 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 515 619 2.1E-22 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 SII_RS04580 89a8cde781e1a9c562e37e15511e9298 725 PANTHER PTHR30614 269 725 1.3E-279 T 22-04-2016 SII_RS04580 89a8cde781e1a9c562e37e15511e9298 725 SUPERFAMILY SSF161098 517 718 1.96E-45 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SII_RS04580 89a8cde781e1a9c562e37e15511e9298 725 SUPERFAMILY SSF53850 1 245 6.16E-58 T 22-04-2016 SII_RS04580 89a8cde781e1a9c562e37e15511e9298 725 Gene3D G3DSA:3.40.190.10 112 204 1.3E-25 T 22-04-2016 SII_RS04580 89a8cde781e1a9c562e37e15511e9298 725 SMART SM00062 270 491 8.7E-54 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SII_RS04580 89a8cde781e1a9c562e37e15511e9298 725 SMART SM00062 25 247 3.9E-43 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SII_RS04580 89a8cde781e1a9c562e37e15511e9298 725 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 26 245 2.5E-54 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SII_RS04580 89a8cde781e1a9c562e37e15511e9298 725 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 272 489 1.9E-58 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SII_RS04580 89a8cde781e1a9c562e37e15511e9298 725 Gene3D G3DSA:3.40.190.10 270 347 9.9E-41 T 22-04-2016 SII_RS04580 89a8cde781e1a9c562e37e15511e9298 725 Gene3D G3DSA:3.40.190.10 25 111 6.7E-33 T 22-04-2016 SII_RS04580 89a8cde781e1a9c562e37e15511e9298 725 Gene3D G3DSA:3.40.190.10 205 246 6.7E-33 T 22-04-2016 SII_RS04580 89a8cde781e1a9c562e37e15511e9298 725 Gene3D G3DSA:3.40.190.10 449 490 9.9E-41 T 22-04-2016 SII_RS04580 89a8cde781e1a9c562e37e15511e9298 725 Gene3D G3DSA:3.40.190.10 348 448 1.8E-27 T 22-04-2016 SII_RS04580 89a8cde781e1a9c562e37e15511e9298 725 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 538 725 2.0E-24 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SII_RS04580 89a8cde781e1a9c562e37e15511e9298 725 SMART SM00079 270 490 3.4E-5 T 22-04-2016 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 SII_RS06275 d9c3cd2008484686b97a13dd2ab5d7b5 287 SUPERFAMILY SSF53790 13 231 3.01E-76 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 SII_RS06275 d9c3cd2008484686b97a13dd2ab5d7b5 287 PANTHER PTHR21091:SF18 9 246 1.9E-81 T 22-04-2016 SII_RS06275 d9c3cd2008484686b97a13dd2ab5d7b5 287 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 16 284 1.7E-79 T 22-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SII_RS06275 d9c3cd2008484686b97a13dd2ab5d7b5 287 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 93 104 - T 22-04-2016 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SII_RS06275 d9c3cd2008484686b97a13dd2ab5d7b5 287 PANTHER PTHR21091 9 246 1.9E-81 T 22-04-2016 SII_RS06275 d9c3cd2008484686b97a13dd2ab5d7b5 287 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 15 233 34.997 T 22-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SII_RS06275 d9c3cd2008484686b97a13dd2ab5d7b5 287 PIRSF PIRSF005917 4 287 6.2E-94 T 22-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SII_RS06275 d9c3cd2008484686b97a13dd2ab5d7b5 287 Gene3D G3DSA:3.30.950.10 123 234 1.3E-37 T 22-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 SII_RS06275 d9c3cd2008484686b97a13dd2ab5d7b5 287 Gene3D G3DSA:1.10.10.60 243 283 4.4E-5 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SII_RS06275 d9c3cd2008484686b97a13dd2ab5d7b5 287 Gene3D G3DSA:3.40.1010.10 14 122 1.4E-14 T 22-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 SII_RS06275 d9c3cd2008484686b97a13dd2ab5d7b5 287 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 15 214 1.7E-19 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 SII_RS06070 4f211fee83b4083949af016b29689c66 230 SUPERFAMILY SSF53167 1 229 2.36E-70 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 SII_RS06070 4f211fee83b4083949af016b29689c66 230 Pfam PF01048 Phosphorylase superfamily 2 229 1.1E-48 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 SII_RS06070 4f211fee83b4083949af016b29689c66 230 PANTHER PTHR21234:SF16 1 229 1.6E-52 T 22-04-2016 SII_RS06070 4f211fee83b4083949af016b29689c66 230 Gene3D G3DSA:3.40.50.1580 1 229 4.6E-72 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 SII_RS06070 4f211fee83b4083949af016b29689c66 230 TIGRFAM TIGR01704 MTA/SAH-Nsdase: MTA/SAH nucleosidase 2 228 8.1E-64 T 22-04-2016 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154|UniPathway: UPA00904 SII_RS06070 4f211fee83b4083949af016b29689c66 230 PANTHER PTHR21234 1 229 1.6E-52 T 22-04-2016 IPR018017 Nucleoside phosphorylase SII_RS01415 133b568e8aa31fe60afaee85cfe3a71c 171 Pfam PF00085 Thioredoxin 89 168 3.5E-9 T 22-04-2016 IPR013766 Thioredoxin domain GO:0045454 SII_RS01415 133b568e8aa31fe60afaee85cfe3a71c 171 SUPERFAMILY SSF52833 60 166 7.5E-19 T 22-04-2016 IPR012336 Thioredoxin-like fold SII_RS01415 133b568e8aa31fe60afaee85cfe3a71c 171 Gene3D G3DSA:3.40.30.10 57 168 3.2E-27 T 22-04-2016 IPR012336 Thioredoxin-like fold SII_RS09295 db08aeb52308d597bd8c55fcb8754765 108 PANTHER PTHR33169:SF3 10 100 2.7E-24 T 22-04-2016 SII_RS09295 db08aeb52308d597bd8c55fcb8754765 108 PANTHER PTHR33169 10 100 2.7E-24 T 22-04-2016 SII_RS09295 db08aeb52308d597bd8c55fcb8754765 108 SUPERFAMILY SSF46785 3 103 8.44E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SII_RS09295 db08aeb52308d597bd8c55fcb8754765 108 Pfam PF03551 Transcriptional regulator PadR-like family 14 82 1.0E-18 T 22-04-2016 IPR005149 Transcription regulator PadR, N-terminal SII_RS09295 db08aeb52308d597bd8c55fcb8754765 108 Gene3D G3DSA:1.10.10.10 8 101 1.9E-28 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SII_RS06900 975f1c30af6ca3f49f43021f42575645 199 SUPERFAMILY SSF52172 1 132 1.57E-29 T 22-04-2016 IPR011006 CheY-like superfamily SII_RS06900 975f1c30af6ca3f49f43021f42575645 199 SUPERFAMILY SSF46894 126 199 2.24E-18 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SII_RS06900 975f1c30af6ca3f49f43021f42575645 199 Pfam PF00072 Response regulator receiver domain 4 114 2.4E-23 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SII_RS06900 975f1c30af6ca3f49f43021f42575645 199 Pfam PF00196 Bacterial regulatory proteins, luxR family 138 193 1.0E-16 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SII_RS06900 975f1c30af6ca3f49f43021f42575645 199 SMART SM00421 136 193 1.0E-19 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SII_RS06900 975f1c30af6ca3f49f43021f42575645 199 Gene3D G3DSA:1.10.10.10 143 199 5.7E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SII_RS06900 975f1c30af6ca3f49f43021f42575645 199 SMART SM00448 1 114 7.2E-24 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SII_RS06900 975f1c30af6ca3f49f43021f42575645 199 ProSitePatterns PS00622 LuxR-type HTH domain signature. 153 180 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SII_RS06900 975f1c30af6ca3f49f43021f42575645 199 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 153 169 4.7E-10 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SII_RS06900 975f1c30af6ca3f49f43021f42575645 199 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 139 153 4.7E-10 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SII_RS06900 975f1c30af6ca3f49f43021f42575645 199 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 169 181 4.7E-10 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SII_RS06900 975f1c30af6ca3f49f43021f42575645 199 PANTHER PTHR26402:SF580 1 199 4.5E-103 T 22-04-2016 SII_RS06900 975f1c30af6ca3f49f43021f42575645 199 Gene3D G3DSA:3.40.50.2300 1 142 5.2E-32 T 22-04-2016 SII_RS06900 975f1c30af6ca3f49f43021f42575645 199 PANTHER PTHR26402 1 199 4.5E-103 T 22-04-2016 SII_RS06350 5b3b679184845bcbc8471b546dd5306a 388 SUPERFAMILY SSF53383 4 386 1.67E-93 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SII_RS06350 5b3b679184845bcbc8471b546dd5306a 388 TIGRFAM TIGR04350 C_S_lyase_PatB: putative C-S lyase 6 385 4.9E-121 T 22-04-2016 IPR027619 Putative C-S lyase KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8|MetaCyc: PWY-6936 SII_RS06350 5b3b679184845bcbc8471b546dd5306a 388 Gene3D G3DSA:3.90.1150.10 250 386 6.2E-37 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SII_RS06350 5b3b679184845bcbc8471b546dd5306a 388 Gene3D G3DSA:3.40.640.10 43 249 4.8E-51 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SII_RS06350 5b3b679184845bcbc8471b546dd5306a 388 Pfam PF00155 Aminotransferase class I and II 43 382 2.3E-42 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 SII_RS06350 5b3b679184845bcbc8471b546dd5306a 388 PANTHER PTHR11751:SF21 5 384 2.5E-124 T 22-04-2016 SII_RS06350 5b3b679184845bcbc8471b546dd5306a 388 PANTHER PTHR11751 5 384 2.5E-124 T 22-04-2016 SII_RS05450 330efde339bebe282ada80f753daabca 158 Pfam PF04073 Aminoacyl-tRNA editing domain 38 147 2.4E-21 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 SII_RS05450 330efde339bebe282ada80f753daabca 158 PANTHER PTHR30411 4 158 6.8E-41 T 22-04-2016 SII_RS05450 330efde339bebe282ada80f753daabca 158 PANTHER PTHR30411:SF0 4 158 6.8E-41 T 22-04-2016 SII_RS05450 330efde339bebe282ada80f753daabca 158 SUPERFAMILY SSF55826 7 155 8.76E-35 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 SII_RS05450 330efde339bebe282ada80f753daabca 158 PIRSF PIRSF006181 5 158 7.5E-51 T 22-04-2016 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC SII_RS05450 330efde339bebe282ada80f753daabca 158 Gene3D G3DSA:3.90.960.10 3 157 1.9E-42 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 SII_RS09405 2a0cee96566ad0cdef2c7a01ce2fe323 168 Gene3D G3DSA:1.10.530.10 80 129 1.5E-4 T 22-04-2016 SII_RS09405 2a0cee96566ad0cdef2c7a01ce2fe323 168 SUPERFAMILY SSF54106 35 78 5.23E-10 T 22-04-2016 IPR018392 LysM domain SII_RS09405 2a0cee96566ad0cdef2c7a01ce2fe323 168 SMART SM00257 35 79 6.2E-12 T 22-04-2016 IPR018392 LysM domain SII_RS09405 2a0cee96566ad0cdef2c7a01ce2fe323 168 Pfam PF01476 LysM domain 36 76 6.4E-12 T 22-04-2016 IPR018392 LysM domain SII_RS09405 2a0cee96566ad0cdef2c7a01ce2fe323 168 Gene3D G3DSA:3.10.350.10 36 76 2.5E-15 T 22-04-2016 IPR018392 LysM domain SII_RS01710 61130db08fafeb58f671d7f55f9a0d89 229 Pfam PF00072 Response regulator receiver domain 5 82 1.6E-11 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SII_RS01710 61130db08fafeb58f671d7f55f9a0d89 229 Gene3D G3DSA:3.40.50.2300 1 121 4.9E-19 T 22-04-2016 SII_RS01710 61130db08fafeb58f671d7f55f9a0d89 229 Gene3D G3DSA:1.10.10.10 136 228 1.4E-29 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SII_RS01710 61130db08fafeb58f671d7f55f9a0d89 229 PANTHER PTHR26402:SF607 3 229 4.0E-66 T 22-04-2016 SII_RS01710 61130db08fafeb58f671d7f55f9a0d89 229 SUPERFAMILY SSF52172 3 174 2.56E-18 T 22-04-2016 IPR011006 CheY-like superfamily SII_RS01710 61130db08fafeb58f671d7f55f9a0d89 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 156 227 4.8E-23 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SII_RS01710 61130db08fafeb58f671d7f55f9a0d89 229 PANTHER PTHR26402 3 229 4.0E-66 T 22-04-2016 SII_RS01710 61130db08fafeb58f671d7f55f9a0d89 229 SMART SM00448 3 114 4.2E-9 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SII_RS01710 61130db08fafeb58f671d7f55f9a0d89 229 SUPERFAMILY SSF46894 136 227 2.07E-26 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SII_RS01710 61130db08fafeb58f671d7f55f9a0d89 229 SMART SM00862 153 227 5.8E-23 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SII_RS02730 ef9da9b37dcbe80c279be8d93d30e907 294 Gene3D G3DSA:1.10.3720.10 58 287 1.9E-41 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SII_RS02730 ef9da9b37dcbe80c279be8d93d30e907 294 PANTHER PTHR30425:SF0 1 294 2.1E-111 T 22-04-2016 SII_RS02730 ef9da9b37dcbe80c279be8d93d30e907 294 PANTHER PTHR30425 1 294 2.1E-111 T 22-04-2016 SII_RS02730 ef9da9b37dcbe80c279be8d93d30e907 294 SUPERFAMILY SSF161098 16 278 3.4E-36 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SII_RS02730 ef9da9b37dcbe80c279be8d93d30e907 294 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 8 283 2.6E-77 T 22-04-2016 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 SII_RS02730 ef9da9b37dcbe80c279be8d93d30e907 294 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 82 292 1.2E-33 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SII_RS08075 fdd6c901f89b24ce14cfe12d2787cdd6 284 TIGRFAM TIGR01533 lipo_e_P4: 5'-nucleotidase, lipoprotein e(P4) family 1 282 1.4E-103 T 22-04-2016 IPR006423 5-nucleotidase lipoprotein e(P4) GO:0009279 SII_RS08075 fdd6c901f89b24ce14cfe12d2787cdd6 284 PIRSF PIRSF019271 1 284 3.5E-101 T 22-04-2016 IPR006423 5-nucleotidase lipoprotein e(P4) GO:0009279 SII_RS08075 fdd6c901f89b24ce14cfe12d2787cdd6 284 Gene3D G3DSA:3.40.50.1000 58 265 2.6E-71 T 22-04-2016 IPR023214 HAD-like domain SII_RS08075 fdd6c901f89b24ce14cfe12d2787cdd6 284 PANTHER PTHR31284:SF10 241 257 5.3E-64 T 22-04-2016 SII_RS08075 fdd6c901f89b24ce14cfe12d2787cdd6 284 PANTHER PTHR31284:SF10 59 223 5.3E-64 T 22-04-2016 SII_RS08075 fdd6c901f89b24ce14cfe12d2787cdd6 284 SUPERFAMILY SSF56784 69 264 8.56E-47 T 22-04-2016 IPR023214 HAD-like domain SII_RS08075 fdd6c901f89b24ce14cfe12d2787cdd6 284 Pfam PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) 40 257 1.6E-56 T 22-04-2016 IPR005519 Acid phosphatase, class B-like SII_RS08075 fdd6c901f89b24ce14cfe12d2787cdd6 284 PANTHER PTHR31284 241 257 5.3E-64 T 22-04-2016 SII_RS08075 fdd6c901f89b24ce14cfe12d2787cdd6 284 PANTHER PTHR31284 59 223 5.3E-64 T 22-04-2016 SII_RS06410 98c0983facbfbae231553abf941cf603 237 TIGRFAM TIGR02404 trehalos_R_Bsub: trehalose operon repressor 3 234 1.4E-90 T 22-04-2016 IPR012770 Trehalose operon transcriptional repressor SII_RS06410 98c0983facbfbae231553abf941cf603 237 SUPERFAMILY SSF64288 72 231 5.18E-39 T 22-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain SII_RS06410 98c0983facbfbae231553abf941cf603 237 Pfam PF00392 Bacterial regulatory proteins, gntR family 3 66 3.2E-16 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SII_RS06410 98c0983facbfbae231553abf941cf603 237 SMART SM00345 7 66 3.9E-12 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SII_RS06410 98c0983facbfbae231553abf941cf603 237 PANTHER PTHR11751:SF347 1 69 5.1E-26 T 22-04-2016 SII_RS06410 98c0983facbfbae231553abf941cf603 237 PANTHER PTHR11751:SF347 117 140 5.1E-26 T 22-04-2016 SII_RS06410 98c0983facbfbae231553abf941cf603 237 SMART SM00866 88 227 5.6E-24 T 22-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 SII_RS06410 98c0983facbfbae231553abf941cf603 237 Pfam PF07702 UTRA domain 90 227 3.2E-32 T 22-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 SII_RS06410 98c0983facbfbae231553abf941cf603 237 SUPERFAMILY SSF46785 2 72 4.23E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SII_RS06410 98c0983facbfbae231553abf941cf603 237 Gene3D G3DSA:1.10.10.10 2 63 4.0E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SII_RS06410 98c0983facbfbae231553abf941cf603 237 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 40 56 2.6E-6 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SII_RS06410 98c0983facbfbae231553abf941cf603 237 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 26 40 2.6E-6 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SII_RS06410 98c0983facbfbae231553abf941cf603 237 PANTHER PTHR11751 1 69 5.1E-26 T 22-04-2016 SII_RS06410 98c0983facbfbae231553abf941cf603 237 PANTHER PTHR11751 117 140 5.1E-26 T 22-04-2016 SII_RS06410 98c0983facbfbae231553abf941cf603 237 Gene3D G3DSA:3.40.1410.10 64 235 1.8E-46 T 22-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain SII_RS06965 b27e41b6b55ba1ae0f3aea9178a8cca9 163 PANTHER PTHR11550 1 156 1.3E-83 T 22-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 SII_RS06965 b27e41b6b55ba1ae0f3aea9178a8cca9 163 Pfam PF00117 Glutamine amidotransferase class-I 1 162 1.3E-34 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 SII_RS06965 b27e41b6b55ba1ae0f3aea9178a8cca9 163 SUPERFAMILY SSF52317 1 162 9.55E-48 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like SII_RS06965 b27e41b6b55ba1ae0f3aea9178a8cca9 163 Gene3D G3DSA:3.40.50.880 1 162 2.1E-59 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like SII_RS01000 2cfe83ce629e3a62254485ff2271b739 137 SUPERFAMILY SSF50249 2 136 2.48E-47 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SII_RS01000 2cfe83ce629e3a62254485ff2271b739 137 Gene3D G3DSA:2.40.50.140 1 136 1.1E-61 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SII_RS01000 2cfe83ce629e3a62254485ff2271b739 137 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 137 8.7E-67 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 SII_RS01000 2cfe83ce629e3a62254485ff2271b739 137 Pfam PF00164 Ribosomal protein S12/S23 2 136 1.1E-38 T 22-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SII_RS01000 2cfe83ce629e3a62254485ff2271b739 137 ProSitePatterns PS00055 Ribosomal protein S12 signature. 56 63 - T 22-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SII_RS01000 2cfe83ce629e3a62254485ff2271b739 137 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 136 39.496 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 SII_RS01000 2cfe83ce629e3a62254485ff2271b739 137 PRINTS PR01034 Ribosomal protein S12 signature 123 135 2.7E-57 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 SII_RS01000 2cfe83ce629e3a62254485ff2271b739 137 PRINTS PR01034 Ribosomal protein S12 signature 55 70 2.7E-57 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 SII_RS01000 2cfe83ce629e3a62254485ff2271b739 137 PRINTS PR01034 Ribosomal protein S12 signature 71 90 2.7E-57 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 SII_RS01000 2cfe83ce629e3a62254485ff2271b739 137 PRINTS PR01034 Ribosomal protein S12 signature 90 107 2.7E-57 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 SII_RS01000 2cfe83ce629e3a62254485ff2271b739 137 PRINTS PR01034 Ribosomal protein S12 signature 40 55 2.7E-57 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 SII_RS01000 2cfe83ce629e3a62254485ff2271b739 137 PRINTS PR01034 Ribosomal protein S12 signature 107 123 2.7E-57 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 SII_RS01000 2cfe83ce629e3a62254485ff2271b739 137 PIRSF PIRSF002133 1 137 6.3E-48 T 22-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SII_RS01000 2cfe83ce629e3a62254485ff2271b739 137 PANTHER PTHR11652 1 129 1.2E-69 T 22-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SII_RS04110 7c541c089a775ca1c82c32654f6e766d 309 PANTHER PTHR30040:SF2 5 304 2.8E-92 T 22-04-2016 IPR024932 Flavin transferase ApbE GO:0017013 SII_RS04110 7c541c089a775ca1c82c32654f6e766d 309 Pfam PF02424 ApbE family 11 288 1.1E-72 T 22-04-2016 IPR024932 Flavin transferase ApbE GO:0017013 SII_RS04110 7c541c089a775ca1c82c32654f6e766d 309 SUPERFAMILY SSF143631 5 307 1.26E-84 T 22-04-2016 IPR003374 ApbE-like domain SII_RS04110 7c541c089a775ca1c82c32654f6e766d 309 PIRSF PIRSF006268 2 309 3.5E-89 T 22-04-2016 IPR024932 Flavin transferase ApbE GO:0017013 SII_RS04110 7c541c089a775ca1c82c32654f6e766d 309 PANTHER PTHR30040 5 304 2.8E-92 T 22-04-2016 SII_RS06020 ac8141bcf9cd5f594707519ffe40566a 229 ProSitePatterns PS01199 Ribosomal protein L1 signature. 120 139 - T 22-04-2016 IPR023673 Ribosomal protein L1, conserved site SII_RS06020 ac8141bcf9cd5f594707519ffe40566a 229 PIRSF PIRSF002155 1 227 3.4E-78 T 22-04-2016 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 SII_RS06020 ac8141bcf9cd5f594707519ffe40566a 229 SUPERFAMILY SSF56808 6 227 1.2E-82 T 22-04-2016 IPR023674 Ribosomal protein L1-like SII_RS06020 ac8141bcf9cd5f594707519ffe40566a 229 Pfam PF00687 Ribosomal protein L1p/L10e family 32 220 9.5E-52 T 22-04-2016 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein SII_RS06020 ac8141bcf9cd5f594707519ffe40566a 229 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 228 1.3E-101 T 22-04-2016 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 SII_RS06020 ac8141bcf9cd5f594707519ffe40566a 229 Gene3D G3DSA:3.30.190.20 161 227 2.4E-43 T 22-04-2016 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 SII_RS06020 ac8141bcf9cd5f594707519ffe40566a 229 Gene3D G3DSA:3.30.190.20 17 68 2.4E-43 T 22-04-2016 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 SII_RS06020 ac8141bcf9cd5f594707519ffe40566a 229 PANTHER PTHR23105 21 229 6.4E-78 T 22-04-2016 SII_RS06020 ac8141bcf9cd5f594707519ffe40566a 229 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 229 43.219 T 22-04-2016 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 SII_RS06020 ac8141bcf9cd5f594707519ffe40566a 229 Gene3D G3DSA:3.40.50.790 69 159 5.7E-44 T 22-04-2016 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich SII_RS06020 ac8141bcf9cd5f594707519ffe40566a 229 PANTHER PTHR23105:SF5 21 229 6.4E-78 T 22-04-2016 SII_RS04795 d5bba5228ddb9d760074ff1192f6e735 119 PIRSF PIRSF016789 1 119 1.3E-41 T 22-04-2016 IPR007401 Protein of unknown function DUF454 SII_RS04795 d5bba5228ddb9d760074ff1192f6e735 119 PANTHER PTHR35813:SF1 1 114 9.1E-42 T 22-04-2016 SII_RS04795 d5bba5228ddb9d760074ff1192f6e735 119 Pfam PF04304 Protein of unknown function (DUF454) 2 114 1.5E-37 T 22-04-2016 IPR007401 Protein of unknown function DUF454 SII_RS04795 d5bba5228ddb9d760074ff1192f6e735 119 PANTHER PTHR35813 1 114 9.1E-42 T 22-04-2016 SII_RS04020 659e01b66c5bdfa4607f0dbd4048fb6a 519 PANTHER PTHR11922 1 516 1.6E-286 T 22-04-2016 SII_RS04020 659e01b66c5bdfa4607f0dbd4048fb6a 519 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 13 201 3.8E-70 T 22-04-2016 IPR004739 GMP synthase, N-terminal GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 SII_RS04020 659e01b66c5bdfa4607f0dbd4048fb6a 519 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 209 519 3.1E-152 T 22-04-2016 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 SII_RS04020 659e01b66c5bdfa4607f0dbd4048fb6a 519 Gene3D G3DSA:3.40.50.880 4 219 6.3E-65 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like SII_RS04020 659e01b66c5bdfa4607f0dbd4048fb6a 519 Pfam PF02540 NAD synthase 215 256 1.6E-7 T 22-04-2016 IPR022310 NAD/GMP synthase SII_RS04020 659e01b66c5bdfa4607f0dbd4048fb6a 519 PRINTS PR00096 Glutamine amidotransferase superfamily signature 57 66 7.3E-8 T 22-04-2016 SII_RS04020 659e01b66c5bdfa4607f0dbd4048fb6a 519 PRINTS PR00096 Glutamine amidotransferase superfamily signature 84 95 7.3E-8 T 22-04-2016 SII_RS04020 659e01b66c5bdfa4607f0dbd4048fb6a 519 PRINTS PR00096 Glutamine amidotransferase superfamily signature 174 187 7.3E-8 T 22-04-2016 SII_RS04020 659e01b66c5bdfa4607f0dbd4048fb6a 519 Pfam PF00958 GMP synthase C terminal domain 427 518 3.7E-43 T 22-04-2016 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 SII_RS04020 659e01b66c5bdfa4607f0dbd4048fb6a 519 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 54 68 1.3E-6 T 22-04-2016 SII_RS04020 659e01b66c5bdfa4607f0dbd4048fb6a 519 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 13 27 1.3E-6 T 22-04-2016 SII_RS04020 659e01b66c5bdfa4607f0dbd4048fb6a 519 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 84 100 1.3E-6 T 22-04-2016 SII_RS04020 659e01b66c5bdfa4607f0dbd4048fb6a 519 PRINTS PR00097 Anthranilate synthase component II signature 57 66 5.4E-6 T 22-04-2016 SII_RS04020 659e01b66c5bdfa4607f0dbd4048fb6a 519 PRINTS PR00097 Anthranilate synthase component II signature 174 187 5.4E-6 T 22-04-2016 SII_RS04020 659e01b66c5bdfa4607f0dbd4048fb6a 519 PRINTS PR00097 Anthranilate synthase component II signature 84 95 5.4E-6 T 22-04-2016 SII_RS04020 659e01b66c5bdfa4607f0dbd4048fb6a 519 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 10 519 53.558 T 22-04-2016 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 SII_RS04020 659e01b66c5bdfa4607f0dbd4048fb6a 519 Gene3D G3DSA:3.40.50.620 220 394 7.0E-59 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SII_RS04020 659e01b66c5bdfa4607f0dbd4048fb6a 519 Gene3D G3DSA:3.30.300.10 395 519 2.1E-50 T 22-04-2016 SII_RS04020 659e01b66c5bdfa4607f0dbd4048fb6a 519 SUPERFAMILY SSF52402 190 441 3.77E-59 T 22-04-2016 SII_RS04020 659e01b66c5bdfa4607f0dbd4048fb6a 519 SUPERFAMILY SSF52317 10 234 2.38E-55 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like SII_RS04020 659e01b66c5bdfa4607f0dbd4048fb6a 519 Pfam PF00117 Glutamine amidotransferase class-I 15 197 9.9E-42 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 SII_RS04020 659e01b66c5bdfa4607f0dbd4048fb6a 519 PANTHER PTHR11922:SF2 1 516 1.6E-286 T 22-04-2016 SII_RS04700 f205967c3daac9a5704f7a3bd3a76b32 162 Gene3D G3DSA:3.90.960.10 3 162 3.2E-52 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 SII_RS04700 f205967c3daac9a5704f7a3bd3a76b32 162 PANTHER PTHR31423 1 162 4.6E-32 T 22-04-2016 SII_RS04700 f205967c3daac9a5704f7a3bd3a76b32 162 PANTHER PTHR31423:SF4 1 162 4.6E-32 T 22-04-2016 SII_RS04700 f205967c3daac9a5704f7a3bd3a76b32 162 Pfam PF04073 Aminoacyl-tRNA editing domain 23 149 1.2E-23 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 SII_RS04700 f205967c3daac9a5704f7a3bd3a76b32 162 SUPERFAMILY SSF55826 2 162 2.62E-41 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 SII_RS04740 8d02138b7dcc817b73c4eab3b051ee08 380 SUPERFAMILY SSF53383 1 374 9.44E-91 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SII_RS04740 8d02138b7dcc817b73c4eab3b051ee08 380 Gene3D G3DSA:3.90.1150.10 247 370 6.9E-31 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SII_RS04740 8d02138b7dcc817b73c4eab3b051ee08 380 Pfam PF00266 Aminotransferase class-V 2 365 1.3E-64 T 22-04-2016 IPR000192 Aminotransferase class V domain SII_RS04740 8d02138b7dcc817b73c4eab3b051ee08 380 Gene3D G3DSA:3.40.640.10 14 246 2.6E-73 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SII_RS04740 8d02138b7dcc817b73c4eab3b051ee08 380 PANTHER PTHR11601 1 380 1.6E-204 T 22-04-2016 SII_RS04740 8d02138b7dcc817b73c4eab3b051ee08 380 PANTHER PTHR11601:SF50 1 380 1.6E-204 T 22-04-2016 SII_RS04740 8d02138b7dcc817b73c4eab3b051ee08 380 PIRSF PIRSF005572 1 380 3.8E-111 T 22-04-2016 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 SII_RS04740 8d02138b7dcc817b73c4eab3b051ee08 380 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 193 212 - T 22-04-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site SII_RS04665 a65184b02c3deb3ec38aa0b2aa701506 113 SUPERFAMILY SSF57783 3 38 1.6E-14 T 22-04-2016 SII_RS04665 a65184b02c3deb3ec38aa0b2aa701506 113 Gene3D G3DSA:2.20.25.10 1 41 7.8E-23 T 22-04-2016 SII_RS04665 a65184b02c3deb3ec38aa0b2aa701506 113 Gene3D G3DSA:2.30.30.40 46 113 1.4E-35 T 22-04-2016 SII_RS04665 a65184b02c3deb3ec38aa0b2aa701506 113 PANTHER PTHR30305 2 113 4.0E-77 T 22-04-2016 SII_RS04665 a65184b02c3deb3ec38aa0b2aa701506 113 TIGRFAM TIGR00686 phnA: putative alkylphosphonate utilization operon protein PhnA 3 112 5.9E-51 T 22-04-2016 IPR004624 PhnA protein SII_RS04665 a65184b02c3deb3ec38aa0b2aa701506 113 Pfam PF03831 PhnA domain 48 113 3.0E-32 T 22-04-2016 IPR013988 PhnA protein, C-terminal SII_RS04665 a65184b02c3deb3ec38aa0b2aa701506 113 Pfam PF08274 PhnA Zinc-Ribbon 3 31 1.4E-15 T 22-04-2016 IPR013987 PhnA protein, N-terminal SII_RS04665 a65184b02c3deb3ec38aa0b2aa701506 113 SUPERFAMILY SSF82057 41 113 6.87E-27 T 22-04-2016 SII_RS01810 49afc0e93ad7dcf684b4c628fa277fa2 246 Gene3D G3DSA:3.30.1330.30 3 90 1.3E-22 T 22-04-2016 IPR029064 50S ribosomal protein L30e-like SII_RS01810 49afc0e93ad7dcf684b4c628fa277fa2 246 PANTHER PTHR12029 1 245 5.4E-58 T 22-04-2016 SII_RS01810 49afc0e93ad7dcf684b4c628fa277fa2 246 SUPERFAMILY SSF55315 3 90 5.65E-19 T 22-04-2016 IPR029064 50S ribosomal protein L30e-like SII_RS01810 49afc0e93ad7dcf684b4c628fa277fa2 246 SMART SM00967 29 95 2.7E-13 T 22-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 SII_RS01810 49afc0e93ad7dcf684b4c628fa277fa2 246 Pfam PF00588 SpoU rRNA Methylase family 104 242 5.4E-35 T 22-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 SII_RS01810 49afc0e93ad7dcf684b4c628fa277fa2 246 SUPERFAMILY SSF75217 84 245 1.05E-39 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases SII_RS01810 49afc0e93ad7dcf684b4c628fa277fa2 246 Gene3D G3DSA:3.40.1280.10 104 245 7.2E-46 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal SII_RS01810 49afc0e93ad7dcf684b4c628fa277fa2 246 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 29 90 2.6E-7 T 22-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 SII_RS00700 581a274e69171b594c7192023436abb5 423 Pfam PF05816 Toxic anion resistance protein (TelA) 64 382 2.1E-20 T 22-04-2016 IPR008863 Toxic anion resistance SII_RS03680 0741abe50bbc90bd5abeb2a97ae5089e 299 PANTHER PTHR11649 4 299 2.6E-122 T 22-04-2016 SII_RS03680 0741abe50bbc90bd5abeb2a97ae5089e 299 TIGRFAM TIGR00436 era: GTP-binding protein Era 6 277 2.8E-106 T 22-04-2016 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 SII_RS03680 0741abe50bbc90bd5abeb2a97ae5089e 299 Pfam PF07650 KH domain 205 283 2.5E-23 T 22-04-2016 IPR004044 K Homology domain, type 2 GO:0003723 SII_RS03680 0741abe50bbc90bd5abeb2a97ae5089e 299 Gene3D G3DSA:3.30.300.20 189 289 8.6E-42 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta SII_RS03680 0741abe50bbc90bd5abeb2a97ae5089e 299 Pfam PF01926 50S ribosome-binding GTPase 8 122 4.0E-23 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 SII_RS03680 0741abe50bbc90bd5abeb2a97ae5089e 299 Gene3D G3DSA:3.40.50.300 7 188 3.1E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS03680 0741abe50bbc90bd5abeb2a97ae5089e 299 SUPERFAMILY SSF54814 178 295 9.16E-43 T 22-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 SII_RS03680 0741abe50bbc90bd5abeb2a97ae5089e 299 PANTHER PTHR11649:SF3 4 299 2.6E-122 T 22-04-2016 SII_RS03680 0741abe50bbc90bd5abeb2a97ae5089e 299 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 6 165 7.9E-32 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 SII_RS03680 0741abe50bbc90bd5abeb2a97ae5089e 299 SUPERFAMILY SSF52540 8 202 3.21E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS03680 0741abe50bbc90bd5abeb2a97ae5089e 299 Hamap MF_00367 GTPase Era [era]. 3 294 37.965 T 22-04-2016 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 SII_RS08175 e1961c67232e11d6e34807c2567f540d 93 PANTHER PTHR10772 2 93 2.1E-22 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 SII_RS08175 e1961c67232e11d6e34807c2567f540d 93 Gene3D G3DSA:2.30.33.40 2 93 7.1E-25 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 SII_RS08175 e1961c67232e11d6e34807c2567f540d 93 Pfam PF00166 Chaperonin 10 Kd subunit 2 92 3.3E-22 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 SII_RS08175 e1961c67232e11d6e34807c2567f540d 93 SUPERFAMILY SSF50129 1 93 1.29E-23 T 22-04-2016 IPR011032 GroES-like SII_RS08175 e1961c67232e11d6e34807c2567f540d 93 SMART SM00883 1 92 2.9E-35 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 SII_RS08175 e1961c67232e11d6e34807c2567f540d 93 ProSitePatterns PS00681 Chaperonins cpn10 signature. 2 25 - T 22-04-2016 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 SII_RS08175 e1961c67232e11d6e34807c2567f540d 93 PRINTS PR00297 10kDa chaperonin signature 79 92 2.3E-18 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 SII_RS08175 e1961c67232e11d6e34807c2567f540d 93 PRINTS PR00297 10kDa chaperonin signature 23 44 2.3E-18 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 SII_RS08175 e1961c67232e11d6e34807c2567f540d 93 PRINTS PR00297 10kDa chaperonin signature 2 17 2.3E-18 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 SII_RS08175 e1961c67232e11d6e34807c2567f540d 93 PRINTS PR00297 10kDa chaperonin signature 58 70 2.3E-18 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 SII_RS08175 e1961c67232e11d6e34807c2567f540d 93 Hamap MF_00580 10 kDa chaperonin [groS]. 1 93 18.485 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 SII_RS08430 829961bc8af45d01c61aa44898b799c6 313 Gene3D G3DSA:3.30.450.90 2 108 1.4E-20 T 22-04-2016 SII_RS08430 829961bc8af45d01c61aa44898b799c6 313 SUPERFAMILY SSF52540 3 305 5.76E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS08430 829961bc8af45d01c61aa44898b799c6 313 PANTHER PTHR30258 5 266 4.9E-72 T 22-04-2016 SII_RS08430 829961bc8af45d01c61aa44898b799c6 313 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 196 210 - T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 SII_RS08430 829961bc8af45d01c61aa44898b799c6 313 Pfam PF00437 Type II/IV secretion system protein 12 266 3.5E-43 T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 SII_RS08430 829961bc8af45d01c61aa44898b799c6 313 Gene3D G3DSA:3.40.50.300 129 270 1.9E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS01115 448b01c5fc8fc43cca547e98a3c54323 283 PANTHER PTHR19139 9 168 9.3E-63 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 SII_RS01115 448b01c5fc8fc43cca547e98a3c54323 283 PANTHER PTHR19139 197 281 9.3E-63 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 SII_RS01115 448b01c5fc8fc43cca547e98a3c54323 283 Pfam PF00230 Major intrinsic protein 6 278 1.1E-36 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 SII_RS01115 448b01c5fc8fc43cca547e98a3c54323 283 PANTHER PTHR19139:SF147 9 168 9.3E-63 T 22-04-2016 SII_RS01115 448b01c5fc8fc43cca547e98a3c54323 283 PANTHER PTHR19139:SF147 197 281 9.3E-63 T 22-04-2016 SII_RS01115 448b01c5fc8fc43cca547e98a3c54323 283 Gene3D G3DSA:1.20.1080.10 3 282 5.4E-80 T 22-04-2016 IPR023271 Aquaporin-like SII_RS01115 448b01c5fc8fc43cca547e98a3c54323 283 PRINTS PR00783 Major intrinsic protein family signature 49 73 1.2E-42 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 SII_RS01115 448b01c5fc8fc43cca547e98a3c54323 283 PRINTS PR00783 Major intrinsic protein family signature 86 105 1.2E-42 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 SII_RS01115 448b01c5fc8fc43cca547e98a3c54323 283 PRINTS PR00783 Major intrinsic protein family signature 210 232 1.2E-42 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 SII_RS01115 448b01c5fc8fc43cca547e98a3c54323 283 PRINTS PR00783 Major intrinsic protein family signature 261 281 1.2E-42 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 SII_RS01115 448b01c5fc8fc43cca547e98a3c54323 283 PRINTS PR00783 Major intrinsic protein family signature 150 168 1.2E-42 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 SII_RS01115 448b01c5fc8fc43cca547e98a3c54323 283 PRINTS PR00783 Major intrinsic protein family signature 7 26 1.2E-42 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 SII_RS01115 448b01c5fc8fc43cca547e98a3c54323 283 SUPERFAMILY SSF81338 197 282 3.27E-61 T 22-04-2016 IPR023271 Aquaporin-like SII_RS01115 448b01c5fc8fc43cca547e98a3c54323 283 SUPERFAMILY SSF81338 5 169 3.27E-61 T 22-04-2016 IPR023271 Aquaporin-like SII_RS01115 448b01c5fc8fc43cca547e98a3c54323 283 ProSitePatterns PS00221 MIP family signature. 67 75 - T 22-04-2016 IPR022357 Major intrinsic protein, conserved site GO:0005215|GO:0006810|GO:0016020 SII_RS04585 53463661e809d94c32015afd041187c6 246 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SII_RS04585 53463661e809d94c32015afd041187c6 246 PANTHER PTHR24220 7 246 1.2E-137 T 22-04-2016 SII_RS04585 53463661e809d94c32015afd041187c6 246 PANTHER PTHR24220:SF531 7 246 1.2E-137 T 22-04-2016 SII_RS04585 53463661e809d94c32015afd041187c6 246 SMART SM00382 30 217 1.8E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain SII_RS04585 53463661e809d94c32015afd041187c6 246 SUPERFAMILY SSF52540 6 239 1.39E-79 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS04585 53463661e809d94c32015afd041187c6 246 PIRSF PIRSF039085 2 245 5.8E-112 T 22-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 SII_RS04585 53463661e809d94c32015afd041187c6 246 Pfam PF00005 ABC transporter 21 169 3.0E-34 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SII_RS04585 53463661e809d94c32015afd041187c6 246 Gene3D G3DSA:3.40.50.300 6 241 1.0E-83 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS01250 b49d7f59362681f78048fc3b34d078a0 311 SUPERFAMILY SSF51395 1 307 2.76E-69 T 22-04-2016 SII_RS01250 b49d7f59362681f78048fc3b34d078a0 311 PANTHER PTHR11938 26 306 1.8E-176 T 22-04-2016 SII_RS01250 b49d7f59362681f78048fc3b34d078a0 311 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 40 59 - T 22-04-2016 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 SII_RS01250 b49d7f59362681f78048fc3b34d078a0 311 TIGRFAM TIGR01037 pyrD_sub1_fam: dihydroorotate dehydrogenase family protein 5 305 3.7E-53 T 22-04-2016 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 SII_RS01250 b49d7f59362681f78048fc3b34d078a0 311 Hamap MF_00224 Dihydroorotate dehydrogenase [pyrD]. 4 307 28.219 T 22-04-2016 IPR024920 Dihydroorotate dehydrogenase, class 1 GO:0004152|GO:0005737|GO:0006221 SII_RS01250 b49d7f59362681f78048fc3b34d078a0 311 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 244 264 - T 22-04-2016 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 SII_RS01250 b49d7f59362681f78048fc3b34d078a0 311 Pfam PF01180 Dihydroorotate dehydrogenase 5 292 5.2E-79 T 22-04-2016 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 SII_RS01250 b49d7f59362681f78048fc3b34d078a0 311 PANTHER PTHR11938:SF106 26 306 1.8E-176 T 22-04-2016 SII_RS01250 b49d7f59362681f78048fc3b34d078a0 311 Gene3D G3DSA:3.20.20.70 1 308 5.4E-77 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SII_RS01250 b49d7f59362681f78048fc3b34d078a0 311 PIRSF PIRSF000164 1 309 1.1E-62 T 22-04-2016 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 Reactome: REACT_1698 SII_RS03575 43d6d98d6877995f6958319d66f5e0e2 442 PANTHER PTHR33989 261 430 8.7E-30 T 22-04-2016 SII_RS03575 43d6d98d6877995f6958319d66f5e0e2 442 PANTHER PTHR33989:SF4 261 430 8.7E-30 T 22-04-2016 SII_RS08775 de88de64a8b5c61de0368c404bf0c3d1 277 SMART SM01383 42 118 1.2E-46 T 22-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SII_RS08775 de88de64a8b5c61de0368c404bf0c3d1 277 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 3 275 6.4E-135 T 22-04-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 SII_RS08775 de88de64a8b5c61de0368c404bf0c3d1 277 Gene3D G3DSA:2.40.50.140 2 114 1.1E-51 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SII_RS08775 de88de64a8b5c61de0368c404bf0c3d1 277 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 118 5.8E-35 T 22-04-2016 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 SII_RS08775 de88de64a8b5c61de0368c404bf0c3d1 277 PANTHER PTHR13691 3 276 1.1E-146 T 22-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SII_RS08775 de88de64a8b5c61de0368c404bf0c3d1 277 Gene3D G3DSA:4.10.950.10 196 274 2.0E-33 T 22-04-2016 IPR014726 Ribosomal protein L2, domain 3 SII_RS08775 de88de64a8b5c61de0368c404bf0c3d1 277 PIRSF PIRSF002158 6 276 2.8E-98 T 22-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SII_RS08775 de88de64a8b5c61de0368c404bf0c3d1 277 Gene3D G3DSA:2.30.30.30 118 195 4.8E-35 T 22-04-2016 IPR014722 Ribosomal protein L2 domain 2 SII_RS08775 de88de64a8b5c61de0368c404bf0c3d1 277 SUPERFAMILY SSF50104 126 273 9.63E-58 T 22-04-2016 IPR008991 Translation protein SH3-like domain SII_RS08775 de88de64a8b5c61de0368c404bf0c3d1 277 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 125 251 8.8E-56 T 22-04-2016 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 SII_RS08775 de88de64a8b5c61de0368c404bf0c3d1 277 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 22-04-2016 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 SII_RS08775 de88de64a8b5c61de0368c404bf0c3d1 277 SMART SM01382 124 253 1.7E-87 T 22-04-2016 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 SII_RS08775 de88de64a8b5c61de0368c404bf0c3d1 277 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 275 48.051 T 22-04-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 SII_RS08775 de88de64a8b5c61de0368c404bf0c3d1 277 SUPERFAMILY SSF50249 3 125 2.98E-51 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SII_RS08235 f5f78cc3d05200421d750c6a10315d27 105 PANTHER PTHR10438:SF301 5 104 1.3E-45 T 22-04-2016 SII_RS08235 f5f78cc3d05200421d750c6a10315d27 105 PANTHER PTHR10438 5 104 1.3E-45 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 SII_RS08235 f5f78cc3d05200421d750c6a10315d27 105 SUPERFAMILY SSF52833 1 101 8.52E-24 T 22-04-2016 IPR012336 Thioredoxin-like fold SII_RS08235 f5f78cc3d05200421d750c6a10315d27 105 Pfam PF00085 Thioredoxin 11 101 5.0E-17 T 22-04-2016 IPR013766 Thioredoxin domain GO:0045454 SII_RS08235 f5f78cc3d05200421d750c6a10315d27 105 Gene3D G3DSA:3.40.30.10 5 101 1.9E-20 T 22-04-2016 IPR012336 Thioredoxin-like fold SII_RS04490 224a1f9f41b0900bf28b7780596ec12b 306 PANTHER PTHR11405 1 304 6.3E-121 T 22-04-2016 SII_RS04490 224a1f9f41b0900bf28b7780596ec12b 306 Gene3D G3DSA:3.40.50.1370 147 280 1.3E-44 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SII_RS04490 224a1f9f41b0900bf28b7780596ec12b 306 Gene3D G3DSA:3.40.50.1370 9 146 1.3E-42 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SII_RS04490 224a1f9f41b0900bf28b7780596ec12b 306 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 9 301 6.4E-90 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 SII_RS04490 224a1f9f41b0900bf28b7780596ec12b 306 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 50 57 - T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SII_RS04490 224a1f9f41b0900bf28b7780596ec12b 306 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 8 303 38.639 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 SII_RS04490 224a1f9f41b0900bf28b7780596ec12b 306 PRINTS PR00101 Aspartate carbamoyltransferase signature 135 152 5.5E-31 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 SII_RS04490 224a1f9f41b0900bf28b7780596ec12b 306 PRINTS PR00101 Aspartate carbamoyltransferase signature 282 296 5.5E-31 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 SII_RS04490 224a1f9f41b0900bf28b7780596ec12b 306 PRINTS PR00101 Aspartate carbamoyltransferase signature 78 87 5.5E-31 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 SII_RS04490 224a1f9f41b0900bf28b7780596ec12b 306 PRINTS PR00101 Aspartate carbamoyltransferase signature 40 62 5.5E-31 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 SII_RS04490 224a1f9f41b0900bf28b7780596ec12b 306 PRINTS PR00101 Aspartate carbamoyltransferase signature 217 226 5.5E-31 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 SII_RS04490 224a1f9f41b0900bf28b7780596ec12b 306 PRINTS PR00101 Aspartate carbamoyltransferase signature 258 263 5.5E-31 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 SII_RS04490 224a1f9f41b0900bf28b7780596ec12b 306 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 266 289 3.1E-19 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SII_RS04490 224a1f9f41b0900bf28b7780596ec12b 306 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 136 147 3.1E-19 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SII_RS04490 224a1f9f41b0900bf28b7780596ec12b 306 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 254 263 3.1E-19 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SII_RS04490 224a1f9f41b0900bf28b7780596ec12b 306 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 50 69 3.1E-19 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SII_RS04490 224a1f9f41b0900bf28b7780596ec12b 306 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 155 298 4.3E-22 T 22-04-2016 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 SII_RS04490 224a1f9f41b0900bf28b7780596ec12b 306 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 9 148 6.4E-31 T 22-04-2016 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 SII_RS04490 224a1f9f41b0900bf28b7780596ec12b 306 SUPERFAMILY SSF53671 6 303 4.71E-87 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SII_RS04490 224a1f9f41b0900bf28b7780596ec12b 306 PANTHER PTHR11405:SF16 1 304 6.3E-121 T 22-04-2016 SII_RS02535 6bfb6f0b73ec8f1d8a8cf9113e3a3cda 175 PANTHER PTHR23091:SF257 1 174 4.7E-29 T 22-04-2016 SII_RS02535 6bfb6f0b73ec8f1d8a8cf9113e3a3cda 175 Pfam PF00583 Acetyltransferase (GNAT) family 64 151 8.4E-16 T 22-04-2016 IPR000182 GNAT domain GO:0008080 SII_RS02535 6bfb6f0b73ec8f1d8a8cf9113e3a3cda 175 PANTHER PTHR23091 1 174 4.7E-29 T 22-04-2016 SII_RS02535 6bfb6f0b73ec8f1d8a8cf9113e3a3cda 175 SUPERFAMILY SSF55729 2 167 4.75E-31 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SII_RS02535 6bfb6f0b73ec8f1d8a8cf9113e3a3cda 175 Gene3D G3DSA:3.40.630.30 3 163 1.8E-34 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SII_RS06360 61196c05ff84154838f5ca4abd3c0061 542 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 377 523 4.7E-22 T 22-04-2016 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain SII_RS06360 61196c05ff84154838f5ca4abd3c0061 542 Pfam PF01943 Polysaccharide biosynthesis protein 15 321 2.3E-30 T 22-04-2016 IPR002797 Polysaccharide biosynthesis protein GO:0016020 SII_RS06360 61196c05ff84154838f5ca4abd3c0061 542 PANTHER PTHR30250:SF6 2 539 6.7E-165 T 22-04-2016 SII_RS06360 61196c05ff84154838f5ca4abd3c0061 542 PIRSF PIRSF038958 7 539 2.4E-66 T 22-04-2016 IPR024923 Peptidoglycan biosynthesis protein, SpoVB type SII_RS06360 61196c05ff84154838f5ca4abd3c0061 542 PANTHER PTHR30250 2 539 6.7E-165 T 22-04-2016 SII_RS02595 14cba1049cb956ded74c0abab7cbb8d0 135 PANTHER PTHR13355:SF5 1 125 1.9E-15 T 22-04-2016 SII_RS02595 14cba1049cb956ded74c0abab7cbb8d0 135 SUPERFAMILY SSF55729 13 127 3.66E-24 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SII_RS02595 14cba1049cb956ded74c0abab7cbb8d0 135 Pfam PF13673 Acetyltransferase (GNAT) domain 25 125 1.9E-15 T 22-04-2016 IPR000182 GNAT domain GO:0008080 SII_RS02595 14cba1049cb956ded74c0abab7cbb8d0 135 Gene3D G3DSA:3.40.630.30 9 130 7.3E-30 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SII_RS02595 14cba1049cb956ded74c0abab7cbb8d0 135 PANTHER PTHR13355 1 125 1.9E-15 T 22-04-2016 SII_RS01900 6d2784a8aa43bb488dbea921faadd6af 216 SMART SM00014 88 199 2.1E-23 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase SII_RS01900 6d2784a8aa43bb488dbea921faadd6af 216 SUPERFAMILY SSF48317 8 212 1.57E-37 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase SII_RS01900 6d2784a8aa43bb488dbea921faadd6af 216 Pfam PF01569 PAP2 superfamily 88 205 9.8E-24 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase SII_RS01900 6d2784a8aa43bb488dbea921faadd6af 216 Gene3D G3DSA:1.20.144.10 49 205 3.7E-30 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase SII_RS01900 6d2784a8aa43bb488dbea921faadd6af 216 PANTHER PTHR14969 35 209 9.0E-31 T 22-04-2016 SII_RS03760 d822dd8bc71ba97bfac8518799a6e5a1 424 PANTHER PTHR11647 1 422 1.2E-165 T 22-04-2016 SII_RS03760 d822dd8bc71ba97bfac8518799a6e5a1 424 TIGRFAM TIGR00857 pyrC_multi: dihydroorotase, multifunctional complex type 21 422 7.4E-110 T 22-04-2016 IPR004722 Dihydroorotase GO:0004151|GO:0006221|GO:0046872 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 SII_RS03760 d822dd8bc71ba97bfac8518799a6e5a1 424 Gene3D G3DSA:2.30.40.10 1 67 8.2E-24 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SII_RS03760 d822dd8bc71ba97bfac8518799a6e5a1 424 PANTHER PTHR11647:SF70 1 422 1.2E-165 T 22-04-2016 SII_RS03760 d822dd8bc71ba97bfac8518799a6e5a1 424 Pfam PF01979 Amidohydrolase family 50 419 4.2E-36 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 SII_RS03760 d822dd8bc71ba97bfac8518799a6e5a1 424 ProSitePatterns PS00483 Dihydroorotase signature 2. 301 312 - T 22-04-2016 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 SII_RS03760 d822dd8bc71ba97bfac8518799a6e5a1 424 ProSitePatterns PS00482 Dihydroorotase signature 1. 57 65 - T 22-04-2016 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 SII_RS03760 d822dd8bc71ba97bfac8518799a6e5a1 424 SUPERFAMILY SSF51338 2 53 5.28E-26 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SII_RS03760 d822dd8bc71ba97bfac8518799a6e5a1 424 SUPERFAMILY SSF51338 366 422 5.28E-26 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SII_RS03760 d822dd8bc71ba97bfac8518799a6e5a1 424 SUPERFAMILY SSF51556 54 365 1.53E-89 T 22-04-2016 IPR032466 Metal-dependent hydrolase SII_RS03760 d822dd8bc71ba97bfac8518799a6e5a1 424 Gene3D G3DSA:3.20.20.140 68 420 2.2E-93 T 22-04-2016 SII_RS03760 d822dd8bc71ba97bfac8518799a6e5a1 424 Hamap MF_00220_B Dihydroorotase [pyrC]. 1 423 38.886 T 22-04-2016 IPR004722 Dihydroorotase GO:0004151|GO:0006221|GO:0046872 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 SII_RS00725 99f35b944d0d25d8bf5bf08c77ea5f10 430 Gene3D G3DSA:1.10.300.10 100 194 6.1E-39 T 22-04-2016 SII_RS00725 99f35b944d0d25d8bf5bf08c77ea5f10 430 SMART SM00788 3 422 2.5E-301 T 22-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 SII_RS00725 99f35b944d0d25d8bf5bf08c77ea5f10 430 PANTHER PTHR11846 4 426 9.3E-258 T 22-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 SII_RS00725 99f35b944d0d25d8bf5bf08c77ea5f10 430 Pfam PF00709 Adenylosuccinate synthetase 4 420 2.2E-183 T 22-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 SII_RS00725 99f35b944d0d25d8bf5bf08c77ea5f10 430 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 5 425 4.2E-190 T 22-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 SII_RS00725 99f35b944d0d25d8bf5bf08c77ea5f10 430 SUPERFAMILY SSF52540 1 427 1.7E-178 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS00725 99f35b944d0d25d8bf5bf08c77ea5f10 430 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 131 142 - T 22-04-2016 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|UniPathway: UPA00075 SII_RS00725 99f35b944d0d25d8bf5bf08c77ea5f10 430 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 10 17 - T 22-04-2016 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 SII_RS00725 99f35b944d0d25d8bf5bf08c77ea5f10 430 Gene3D G3DSA:3.90.170.10 265 423 3.0E-71 T 22-04-2016 SII_RS00725 99f35b944d0d25d8bf5bf08c77ea5f10 430 Gene3D G3DSA:3.40.440.10 195 264 2.7E-72 T 22-04-2016 SII_RS00725 99f35b944d0d25d8bf5bf08c77ea5f10 430 Gene3D G3DSA:3.40.440.10 1 93 2.7E-72 T 22-04-2016 SII_RS00725 99f35b944d0d25d8bf5bf08c77ea5f10 430 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 430 215.106 T 22-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 SII_RS04340 9698550a7a287244bd4f2207e67e8de5 448 TIGRFAM TIGR00457 asnS: asparagine--tRNA ligase 9 447 9.4E-139 T 22-04-2016 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22|Reactome: REACT_71 SII_RS04340 9698550a7a287244bd4f2207e67e8de5 448 SUPERFAMILY SSF50249 12 113 1.05E-18 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SII_RS04340 9698550a7a287244bd4f2207e67e8de5 448 PRINTS PR01042 Aspartyl-tRNA synthetase signature 363 379 3.3E-14 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SII_RS04340 9698550a7a287244bd4f2207e67e8de5 448 PRINTS PR01042 Aspartyl-tRNA synthetase signature 191 203 3.3E-14 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SII_RS04340 9698550a7a287244bd4f2207e67e8de5 448 PRINTS PR01042 Aspartyl-tRNA synthetase signature 207 220 3.3E-14 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SII_RS04340 9698550a7a287244bd4f2207e67e8de5 448 PRINTS PR01042 Aspartyl-tRNA synthetase signature 403 417 3.3E-14 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SII_RS04340 9698550a7a287244bd4f2207e67e8de5 448 Gene3D G3DSA:3.30.930.10 113 447 9.2E-104 T 22-04-2016 SII_RS04340 9698550a7a287244bd4f2207e67e8de5 448 Hamap MF_00534 Asparagine--tRNA ligase [asnS]. 4 448 40.023 T 22-04-2016 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22|Reactome: REACT_71 SII_RS04340 9698550a7a287244bd4f2207e67e8de5 448 PANTHER PTHR22594 4 448 7.6E-181 T 22-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SII_RS04340 9698550a7a287244bd4f2207e67e8de5 448 SUPERFAMILY SSF55681 121 442 6.84E-86 T 22-04-2016 SII_RS04340 9698550a7a287244bd4f2207e67e8de5 448 PANTHER PTHR22594:SF16 4 448 7.6E-181 T 22-04-2016 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22|Reactome: REACT_71 SII_RS04340 9698550a7a287244bd4f2207e67e8de5 448 Pfam PF00152 tRNA synthetases class II (D, K and N) 122 442 2.2E-77 T 22-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SII_RS04340 9698550a7a287244bd4f2207e67e8de5 448 Pfam PF01336 OB-fold nucleic acid binding domain 19 106 8.5E-13 T 22-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 SII_RS04340 9698550a7a287244bd4f2207e67e8de5 448 Gene3D G3DSA:2.40.50.140 10 112 2.1E-24 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SII_RS07620 54c04f2122ed32ea318fb3904a6d051e 195 TIGRFAM TIGR04567 RNAP_delt_lowGC: DNA-directed RNA polymerase delta subunit 13 94 9.2E-31 T 22-04-2016 IPR029757 DNA-directed RNA polymerase subunit delta GO:0006351|GO:0006355 SII_RS07620 54c04f2122ed32ea318fb3904a6d051e 195 PANTHER PTHR41322 2 195 9.3E-52 T 22-04-2016 SII_RS07620 54c04f2122ed32ea318fb3904a6d051e 195 Hamap MF_00357 Probable DNA-directed RNA polymerase subunit delta [rpoE]. 9 189 16.021 T 22-04-2016 IPR029757 DNA-directed RNA polymerase subunit delta GO:0006351|GO:0006355 SII_RS07620 54c04f2122ed32ea318fb3904a6d051e 195 Pfam PF05066 HB1, ASXL, restriction endonuclease HTH domain 15 83 8.3E-8 T 22-04-2016 IPR007759 HB1/Asxl, restriction endonuclease HTH domain GO:0006351|GO:0006355 SII_RS02715 540c0564cbd2ff902622d85f47356471 434 PANTHER PTHR22807 1 280 1.5E-117 T 22-04-2016 SII_RS02715 540c0564cbd2ff902622d85f47356471 434 SUPERFAMILY SSF53335 2 280 2.34E-59 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SII_RS02715 540c0564cbd2ff902622d85f47356471 434 Pfam PF17126 RsmF rRNA methyltransferase first C-terminal domain 308 368 9.6E-21 T 22-04-2016 IPR031340 Ribosomal RNA small subunit methyltransferase F, first C-terminal domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SII_RS02715 540c0564cbd2ff902622d85f47356471 434 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 213 229 1.9E-21 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SII_RS02715 540c0564cbd2ff902622d85f47356471 434 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 67 81 1.9E-21 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SII_RS02715 540c0564cbd2ff902622d85f47356471 434 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 163 175 1.9E-21 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SII_RS02715 540c0564cbd2ff902622d85f47356471 434 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 264 281 1.9E-21 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SII_RS02715 540c0564cbd2ff902622d85f47356471 434 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 96 106 1.9E-21 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SII_RS02715 540c0564cbd2ff902622d85f47356471 434 Gene3D G3DSA:3.40.50.150 79 280 1.4E-54 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SII_RS02715 540c0564cbd2ff902622d85f47356471 434 Pfam PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF 3 81 3.3E-14 T 22-04-2016 IPR031341 Ribosomal RNA small subunit methyltransferase F, N-terminal KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SII_RS02715 540c0564cbd2ff902622d85f47356471 434 Pfam PF01189 16S rRNA methyltransferase RsmB/F 86 280 7.9E-46 T 22-04-2016 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SII_RS02715 540c0564cbd2ff902622d85f47356471 434 PANTHER PTHR22807:SF36 1 280 1.5E-117 T 22-04-2016 SII_RS02715 540c0564cbd2ff902622d85f47356471 434 Pfam PF13636 RNA-binding PUA-like domain of methyltransferase RsmF 385 433 2.8E-14 T 22-04-2016 IPR027391 rRNA small subunit methyltransferase F, RNA-binding PUA-like domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SII_RS05360 43b4194349634e7873cec61090593f6b 194 Pfam PF03167 Uracil DNA glycosylase superfamily 32 185 2.3E-19 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like SII_RS05360 43b4194349634e7873cec61090593f6b 194 SMART SM00986 27 185 6.4E-23 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like SII_RS05360 43b4194349634e7873cec61090593f6b 194 SMART SM00987 27 185 6.4E-23 T 22-04-2016 SII_RS05360 43b4194349634e7873cec61090593f6b 194 Gene3D G3DSA:3.40.470.10 3 192 1.6E-35 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like SII_RS05360 43b4194349634e7873cec61090593f6b 194 SUPERFAMILY SSF52141 4 192 3.27E-47 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like SII_RS05360 43b4194349634e7873cec61090593f6b 194 PANTHER PTHR42160:SF1 1 194 6.6E-96 T 22-04-2016 SII_RS05360 43b4194349634e7873cec61090593f6b 194 PANTHER PTHR42160 1 194 6.6E-96 T 22-04-2016 SII_RS08360 cdb0bd331e7bc31a1e8aa00b0ccba3e7 130 Gene3D G3DSA:3.10.450.130 63 130 2.9E-5 T 22-04-2016 SII_RS08360 cdb0bd331e7bc31a1e8aa00b0ccba3e7 130 Pfam PF07006 Protein of unknown function (DUF1310) 9 122 4.2E-33 T 22-04-2016 IPR010738 Protein of unknown function DUF1310 SII_RS04430 daa5cd045664843218126951b50f5ea0 78 Pfam PF01649 Ribosomal protein S20 2 76 7.1E-20 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SII_RS04430 daa5cd045664843218126951b50f5ea0 78 PANTHER PTHR33398 2 78 1.2E-24 T 22-04-2016 SII_RS04430 daa5cd045664843218126951b50f5ea0 78 SUPERFAMILY SSF46992 3 77 2.09E-21 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SII_RS04430 daa5cd045664843218126951b50f5ea0 78 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 78 15.244 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SII_RS04430 daa5cd045664843218126951b50f5ea0 78 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 14 76 2.0E-22 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SII_RS04430 daa5cd045664843218126951b50f5ea0 78 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 78 1.4E-18 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SII_RS04430 daa5cd045664843218126951b50f5ea0 78 Gene3D G3DSA:1.20.58.110 1 78 1.2E-21 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SII_RS09385 35b7477718544116d712cf56f76767c7 150 SUPERFAMILY SSF55653 57 149 1.09E-24 T 22-04-2016 IPR020069 Ribosomal protein L9, C-terminal SII_RS09385 35b7477718544116d712cf56f76767c7 150 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 46 1.9E-17 T 22-04-2016 IPR020070 Ribosomal protein L9, N-terminal SII_RS09385 35b7477718544116d712cf56f76767c7 150 SUPERFAMILY SSF55658 1 56 2.62E-13 T 22-04-2016 IPR009027 Ribosomal protein L9/RNase H1, N-terminal SII_RS09385 35b7477718544116d712cf56f76767c7 150 Gene3D G3DSA:3.10.430.100 61 149 2.3E-27 T 22-04-2016 IPR020069 Ribosomal protein L9, C-terminal SII_RS09385 35b7477718544116d712cf56f76767c7 150 PANTHER PTHR21368 1 149 5.3E-39 T 22-04-2016 IPR000244 Ribosomal protein L9 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SII_RS09385 35b7477718544116d712cf56f76767c7 150 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 150 23.02 T 22-04-2016 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 SII_RS09385 35b7477718544116d712cf56f76767c7 150 Gene3D G3DSA:3.40.5.10 1 51 4.9E-19 T 22-04-2016 IPR020070 Ribosomal protein L9, N-terminal SII_RS09385 35b7477718544116d712cf56f76767c7 150 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 149 7.5E-38 T 22-04-2016 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 SII_RS09385 35b7477718544116d712cf56f76767c7 150 Pfam PF03948 Ribosomal protein L9, C-terminal domain 63 148 3.1E-26 T 22-04-2016 IPR020069 Ribosomal protein L9, C-terminal SII_RS01210 ef7546f55df0d285a77d33c021bbe68d 777 Hamap MF_00092 Endonuclease MutS2 [mutS2]. 2 776 19.534 T 22-04-2016 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 SII_RS01210 ef7546f55df0d285a77d33c021bbe68d 777 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 403 419 - T 22-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 SII_RS01210 ef7546f55df0d285a77d33c021bbe68d 777 PANTHER PTHR11361:SF14 1 593 1.8E-217 T 22-04-2016 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 SII_RS01210 ef7546f55df0d285a77d33c021bbe68d 777 Pfam PF01713 Smr domain 702 777 2.9E-20 T 22-04-2016 IPR002625 Smr domain SII_RS01210 ef7546f55df0d285a77d33c021bbe68d 777 SMART SM00533 9 310 2.5E-6 T 22-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 SII_RS01210 ef7546f55df0d285a77d33c021bbe68d 777 SUPERFAMILY SSF52540 287 506 6.17E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS01210 ef7546f55df0d285a77d33c021bbe68d 777 TIGRFAM TIGR01069 mutS2: MutS2 family protein 1 775 7.7E-208 T 22-04-2016 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 SII_RS01210 ef7546f55df0d285a77d33c021bbe68d 777 SMART SM00463 699 777 5.8E-19 T 22-04-2016 IPR002625 Smr domain SII_RS01210 ef7546f55df0d285a77d33c021bbe68d 777 SMART SM00534 324 506 2.0E-67 T 22-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 SII_RS01210 ef7546f55df0d285a77d33c021bbe68d 777 SUPERFAMILY SSF48334 57 276 2.22E-25 T 22-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 SII_RS01210 ef7546f55df0d285a77d33c021bbe68d 777 Gene3D G3DSA:3.40.50.300 287 506 2.5E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS01210 ef7546f55df0d285a77d33c021bbe68d 777 SUPERFAMILY SSF160443 700 776 5.75E-10 T 22-04-2016 IPR002625 Smr domain SII_RS01210 ef7546f55df0d285a77d33c021bbe68d 777 PANTHER PTHR11361 1 593 1.8E-217 T 22-04-2016 SII_RS01210 ef7546f55df0d285a77d33c021bbe68d 777 PIRSF PIRSF005814 1 777 2.8E-249 T 22-04-2016 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 SII_RS01210 ef7546f55df0d285a77d33c021bbe68d 777 Pfam PF00488 MutS domain V 324 506 1.0E-35 T 22-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 SII_RS05820 500f9df011ae902378df19615711e6ec 79 Pfam PF04193 PQ loop repeat 2 51 1.1E-11 T 22-04-2016 IPR006603 PQ-loop repeat SII_RS02835 4e2b7e3b687cbdee0cffa595dfe035bf 230 Gene3D G3DSA:3.40.50.10300 1 226 3.2E-53 T 22-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 SII_RS02835 4e2b7e3b687cbdee0cffa595dfe035bf 230 PANTHER PTHR14359:SF22 1 96 1.6E-71 T 22-04-2016 SII_RS02835 4e2b7e3b687cbdee0cffa595dfe035bf 230 PANTHER PTHR14359:SF22 117 224 1.6E-71 T 22-04-2016 SII_RS02835 4e2b7e3b687cbdee0cffa595dfe035bf 230 TIGRFAM TIGR02114 coaB_strep: phosphopantothenate--cysteine ligase 1 227 1.5E-99 T 22-04-2016 IPR011848 Phosphopantothenate--cysteine ligase SII_RS02835 4e2b7e3b687cbdee0cffa595dfe035bf 230 PANTHER PTHR14359 1 96 1.6E-71 T 22-04-2016 SII_RS02835 4e2b7e3b687cbdee0cffa595dfe035bf 230 PANTHER PTHR14359 117 224 1.6E-71 T 22-04-2016 SII_RS02835 4e2b7e3b687cbdee0cffa595dfe035bf 230 SUPERFAMILY SSF102645 2 225 7.98E-50 T 22-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 SII_RS02835 4e2b7e3b687cbdee0cffa595dfe035bf 230 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 2 192 2.0E-34 T 22-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 SII_RS02845 c8099899606216958a95de51432ad3e2 556 Gene3D G3DSA:3.40.50.300 13 128 4.8E-143 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS02845 c8099899606216958a95de51432ad3e2 556 Gene3D G3DSA:3.40.50.300 248 441 4.8E-143 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS02845 c8099899606216958a95de51432ad3e2 556 PANTHER PTHR10025 1 555 0.0 T 22-04-2016 SII_RS02845 c8099899606216958a95de51432ad3e2 556 Hamap MF_01543 Formate--tetrahydrofolate ligase [fhs]. 1 556 48.322 T 22-04-2016 IPR000559 Formate-tetrahydrofolate ligase, FTHFS GO:0004329|GO:0005524|GO:0009396 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 SII_RS02845 c8099899606216958a95de51432ad3e2 556 ProSitePatterns PS00722 Formate--tetrahydrofolate ligase signature 2. 328 339 - T 22-04-2016 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site GO:0004329|GO:0005524|GO:0009396 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 SII_RS02845 c8099899606216958a95de51432ad3e2 556 Gene3D G3DSA:3.30.1510.10 129 246 5.9E-55 T 22-04-2016 SII_RS02845 c8099899606216958a95de51432ad3e2 556 Pfam PF01268 Formate--tetrahydrofolate ligase 2 556 9.5E-263 T 22-04-2016 IPR000559 Formate-tetrahydrofolate ligase, FTHFS GO:0004329|GO:0005524|GO:0009396 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 SII_RS02845 c8099899606216958a95de51432ad3e2 556 SUPERFAMILY SSF52540 4 554 6.07E-239 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS02845 c8099899606216958a95de51432ad3e2 556 Gene3D G3DSA:3.10.410.10 444 532 4.7E-39 T 22-04-2016 SII_RS02845 c8099899606216958a95de51432ad3e2 556 ProSitePatterns PS00721 Formate--tetrahydrofolate ligase signature 1. 103 113 - T 22-04-2016 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site GO:0004329|GO:0005524|GO:0009396 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 SII_RS02180 ce74fd2a0d237f54fb3f51ad92aa2f73 310 PANTHER PTHR10584 7 284 1.2E-22 T 22-04-2016 SII_RS02180 ce74fd2a0d237f54fb3f51ad92aa2f73 310 Gene3D G3DSA:3.40.1190.20 32 308 6.9E-46 T 22-04-2016 IPR029056 Ribokinase-like SII_RS02180 ce74fd2a0d237f54fb3f51ad92aa2f73 310 SUPERFAMILY SSF53613 1 288 5.77E-44 T 22-04-2016 IPR029056 Ribokinase-like SII_RS02180 ce74fd2a0d237f54fb3f51ad92aa2f73 310 PIRSF PIRSF000535 1 310 2.0E-51 T 22-04-2016 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 SII_RS02180 ce74fd2a0d237f54fb3f51ad92aa2f73 310 Pfam PF00294 pfkB family carbohydrate kinase 21 286 2.1E-31 T 22-04-2016 IPR011611 Carbohydrate kinase PfkB SII_RS04890 b97faf572747e50220cd0dd09405dd89 400 SUPERFAMILY SSF52540 35 241 3.24E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS04890 b97faf572747e50220cd0dd09405dd89 400 ProSitePatterns PS00211 ABC transporters family signature. 151 165 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SII_RS04890 b97faf572747e50220cd0dd09405dd89 400 SMART SM00382 55 235 1.6E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain SII_RS04890 b97faf572747e50220cd0dd09405dd89 400 Pfam PF00005 ABC transporter 46 177 3.0E-21 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SII_RS04890 b97faf572747e50220cd0dd09405dd89 400 PANTHER PTHR24220 33 256 9.4E-95 T 22-04-2016 SII_RS04890 b97faf572747e50220cd0dd09405dd89 400 PANTHER PTHR24220 278 311 9.4E-95 T 22-04-2016 SII_RS04890 b97faf572747e50220cd0dd09405dd89 400 Gene3D G3DSA:3.40.50.300 5 242 3.2E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS04890 b97faf572747e50220cd0dd09405dd89 400 PANTHER PTHR24220:SF117 33 256 9.4E-95 T 22-04-2016 SII_RS04890 b97faf572747e50220cd0dd09405dd89 400 PANTHER PTHR24220:SF117 278 311 9.4E-95 T 22-04-2016 SII_RS06740 595314ef9a97f91244df8ae40461247d 510 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 330 342 1.4E-62 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SII_RS06740 595314ef9a97f91244df8ae40461247d 510 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 210 232 1.4E-62 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SII_RS06740 595314ef9a97f91244df8ae40461247d 510 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 308 316 1.4E-62 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SII_RS06740 595314ef9a97f91244df8ae40461247d 510 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 435 456 1.4E-62 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SII_RS06740 595314ef9a97f91244df8ae40461247d 510 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 242 257 1.4E-62 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SII_RS06740 595314ef9a97f91244df8ae40461247d 510 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 262 272 1.4E-62 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SII_RS06740 595314ef9a97f91244df8ae40461247d 510 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 470 488 1.4E-62 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SII_RS06740 595314ef9a97f91244df8ae40461247d 510 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 345 369 1.4E-62 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SII_RS06740 595314ef9a97f91244df8ae40461247d 510 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 397 413 1.4E-62 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SII_RS06740 595314ef9a97f91244df8ae40461247d 510 TIGRFAM TIGR03140 AhpF: alkyl hydroperoxide reductase subunit F 3 510 2.2E-228 T 22-04-2016 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0016651|GO:0050660|GO:0051287|GO:0055114 SII_RS06740 595314ef9a97f91244df8ae40461247d 510 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 209 489 3.3E-47 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SII_RS06740 595314ef9a97f91244df8ae40461247d 510 SUPERFAMILY SSF51905 202 506 1.73E-48 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SII_RS06740 595314ef9a97f91244df8ae40461247d 510 Gene3D G3DSA:3.50.50.60 314 504 8.8E-40 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SII_RS06740 595314ef9a97f91244df8ae40461247d 510 Gene3D G3DSA:3.50.50.60 206 313 7.0E-23 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SII_RS06740 595314ef9a97f91244df8ae40461247d 510 Pfam PF13192 Thioredoxin domain 124 193 2.3E-8 T 22-04-2016 IPR012336 Thioredoxin-like fold SII_RS06740 595314ef9a97f91244df8ae40461247d 510 PANTHER PTHR22912:SF107 195 506 1.4E-176 T 22-04-2016 SII_RS06740 595314ef9a97f91244df8ae40461247d 510 Gene3D G3DSA:3.40.30.10 3 93 1.3E-27 T 22-04-2016 IPR012336 Thioredoxin-like fold SII_RS06740 595314ef9a97f91244df8ae40461247d 510 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 307 325 1.8E-37 T 22-04-2016 SII_RS06740 595314ef9a97f91244df8ae40461247d 510 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 349 367 1.8E-37 T 22-04-2016 SII_RS06740 595314ef9a97f91244df8ae40461247d 510 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 433 449 1.8E-37 T 22-04-2016 SII_RS06740 595314ef9a97f91244df8ae40461247d 510 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 211 230 1.8E-37 T 22-04-2016 SII_RS06740 595314ef9a97f91244df8ae40461247d 510 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 460 482 1.8E-37 T 22-04-2016 SII_RS06740 595314ef9a97f91244df8ae40461247d 510 PANTHER PTHR22912 195 506 1.4E-176 T 22-04-2016 SII_RS06740 595314ef9a97f91244df8ae40461247d 510 PIRSF PIRSF000238 2 510 1.2E-243 T 22-04-2016 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0016651|GO:0050660|GO:0051287|GO:0055114 SII_RS06740 595314ef9a97f91244df8ae40461247d 510 SUPERFAMILY SSF52833 103 194 1.23E-20 T 22-04-2016 IPR012336 Thioredoxin-like fold SII_RS06740 595314ef9a97f91244df8ae40461247d 510 Gene3D G3DSA:3.40.30.10 102 194 1.3E-35 T 22-04-2016 IPR012336 Thioredoxin-like fold SII_RS06740 595314ef9a97f91244df8ae40461247d 510 SUPERFAMILY SSF52833 3 100 6.71E-25 T 22-04-2016 IPR012336 Thioredoxin-like fold SII_RS06740 595314ef9a97f91244df8ae40461247d 510 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 337 357 - T 22-04-2016 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 SII_RS00755 33aa24ebadba05fd808377aeef04492c 256 Gene3D G3DSA:2.40.30.10 41 127 5.8E-10 T 22-04-2016 SII_RS00755 33aa24ebadba05fd808377aeef04492c 256 SUPERFAMILY SSF63380 41 126 7.66E-8 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 SII_RS00755 33aa24ebadba05fd808377aeef04492c 256 Gene3D G3DSA:3.40.50.80 136 252 4.2E-7 T 22-04-2016 SII_RS00755 33aa24ebadba05fd808377aeef04492c 256 SUPERFAMILY SSF52343 136 252 2.88E-6 T 22-04-2016 SII_RS03475 ca611d9bc1440bf2d21e9c327e03eb1c 307 Gene3D G3DSA:3.40.50.1980 190 306 6.0E-38 T 22-04-2016 SII_RS03475 ca611d9bc1440bf2d21e9c327e03eb1c 307 PRINTS PR00691 Adhesin B signature 139 158 2.3E-11 T 22-04-2016 IPR006129 Adhesin B GO:0007155 SII_RS03475 ca611d9bc1440bf2d21e9c327e03eb1c 307 PRINTS PR00691 Adhesin B signature 75 94 2.3E-11 T 22-04-2016 IPR006129 Adhesin B GO:0007155 SII_RS03475 ca611d9bc1440bf2d21e9c327e03eb1c 307 PRINTS PR00691 Adhesin B signature 32 53 2.3E-11 T 22-04-2016 IPR006129 Adhesin B GO:0007155 SII_RS03475 ca611d9bc1440bf2d21e9c327e03eb1c 307 PRINTS PR00691 Adhesin B signature 195 212 2.3E-11 T 22-04-2016 IPR006129 Adhesin B GO:0007155 SII_RS03475 ca611d9bc1440bf2d21e9c327e03eb1c 307 PRINTS PR00691 Adhesin B signature 244 261 2.3E-11 T 22-04-2016 IPR006129 Adhesin B GO:0007155 SII_RS03475 ca611d9bc1440bf2d21e9c327e03eb1c 307 PRINTS PR00691 Adhesin B signature 221 239 2.3E-11 T 22-04-2016 IPR006129 Adhesin B GO:0007155 SII_RS03475 ca611d9bc1440bf2d21e9c327e03eb1c 307 Gene3D G3DSA:3.40.50.1980 20 189 8.4E-49 T 22-04-2016 SII_RS03475 ca611d9bc1440bf2d21e9c327e03eb1c 307 PANTHER PTHR30477:SF10 4 298 1.8E-147 T 22-04-2016 SII_RS03475 ca611d9bc1440bf2d21e9c327e03eb1c 307 Pfam PF01297 Zinc-uptake complex component A periplasmic 35 303 1.5E-66 T 22-04-2016 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 SII_RS03475 ca611d9bc1440bf2d21e9c327e03eb1c 307 PANTHER PTHR30477 4 298 1.8E-147 T 22-04-2016 SII_RS03475 ca611d9bc1440bf2d21e9c327e03eb1c 307 PRINTS PR00690 Adhesin family signature 32 50 9.9E-14 T 22-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 SII_RS03475 ca611d9bc1440bf2d21e9c327e03eb1c 307 PRINTS PR00690 Adhesin family signature 62 75 9.9E-14 T 22-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 SII_RS03475 ca611d9bc1440bf2d21e9c327e03eb1c 307 PRINTS PR00690 Adhesin family signature 195 216 9.9E-14 T 22-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 SII_RS03475 ca611d9bc1440bf2d21e9c327e03eb1c 307 PRINTS PR00690 Adhesin family signature 75 92 9.9E-14 T 22-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 SII_RS03475 ca611d9bc1440bf2d21e9c327e03eb1c 307 PRINTS PR00690 Adhesin family signature 248 266 9.9E-14 T 22-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 SII_RS03475 ca611d9bc1440bf2d21e9c327e03eb1c 307 SUPERFAMILY SSF53807 17 306 2.55E-75 T 22-04-2016 SII_RS07585 2d58d8c618a64b21209b6217f37af9da 355 PANTHER PTHR24220:SF503 10 350 2.3E-191 T 22-04-2016 SII_RS07585 2d58d8c618a64b21209b6217f37af9da 355 Gene3D G3DSA:3.40.50.300 3 266 1.8E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS07585 2d58d8c618a64b21209b6217f37af9da 355 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 237 322 3.6E-17 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 SII_RS07585 2d58d8c618a64b21209b6217f37af9da 355 Pfam PF00005 ABC transporter 29 187 2.0E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SII_RS07585 2d58d8c618a64b21209b6217f37af9da 355 SUPERFAMILY SSF52540 8 258 9.43E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS07585 2d58d8c618a64b21209b6217f37af9da 355 SMART SM00382 37 237 8.2E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain SII_RS07585 2d58d8c618a64b21209b6217f37af9da 355 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 239 301 1.2E-11 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 SII_RS07585 2d58d8c618a64b21209b6217f37af9da 355 ProSitePatterns PS00211 ABC transporters family signature. 160 174 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SII_RS07585 2d58d8c618a64b21209b6217f37af9da 355 PANTHER PTHR24220 10 350 2.3E-191 T 22-04-2016 SII_RS03415 45e3277c108077056f9135cbb1c81fd1 75 Gene3D G3DSA:1.10.260.40 3 62 2.1E-18 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SII_RS03415 45e3277c108077056f9135cbb1c81fd1 75 SUPERFAMILY SSF47413 3 68 1.41E-14 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SII_RS03415 45e3277c108077056f9135cbb1c81fd1 75 SMART SM00530 4 60 6.8E-15 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SII_RS03415 45e3277c108077056f9135cbb1c81fd1 75 Pfam PF01381 Helix-turn-helix 5 60 2.4E-15 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SII_RS03415 45e3277c108077056f9135cbb1c81fd1 75 PANTHER PTHR10245 3 69 2.3E-13 T 22-04-2016 SII_RS00555 3203f56b5e2c0a338e1f0d664a29d5b8 494 Gene3D G3DSA:3.40.50.1100 123 203 1.1E-10 T 22-04-2016 SII_RS00555 3203f56b5e2c0a338e1f0d664a29d5b8 494 Pfam PF14821 Threonine synthase N terminus 5 80 1.4E-21 T 22-04-2016 IPR029144 Threonine synthase, N-terminal SII_RS00555 3203f56b5e2c0a338e1f0d664a29d5b8 494 PANTHER PTHR10314 373 486 4.6E-126 T 22-04-2016 SII_RS00555 3203f56b5e2c0a338e1f0d664a29d5b8 494 PANTHER PTHR10314 54 343 4.6E-126 T 22-04-2016 SII_RS00555 3203f56b5e2c0a338e1f0d664a29d5b8 494 PANTHER PTHR10314 27 38 4.6E-126 T 22-04-2016 SII_RS00555 3203f56b5e2c0a338e1f0d664a29d5b8 494 Gene3D G3DSA:3.90.1380.10 4 85 6.3E-26 T 22-04-2016 IPR029144 Threonine synthase, N-terminal SII_RS00555 3203f56b5e2c0a338e1f0d664a29d5b8 494 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 102 424 2.0E-13 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme SII_RS00555 3203f56b5e2c0a338e1f0d664a29d5b8 494 Gene3D G3DSA:3.40.50.1100 204 445 1.3E-88 T 22-04-2016 SII_RS00555 3203f56b5e2c0a338e1f0d664a29d5b8 494 SUPERFAMILY SSF53686 3 484 2.25E-144 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme SII_RS00555 3203f56b5e2c0a338e1f0d664a29d5b8 494 PANTHER PTHR10314:SF1 373 486 4.6E-126 T 22-04-2016 SII_RS00555 3203f56b5e2c0a338e1f0d664a29d5b8 494 PANTHER PTHR10314:SF1 54 343 4.6E-126 T 22-04-2016 SII_RS00555 3203f56b5e2c0a338e1f0d664a29d5b8 494 PANTHER PTHR10314:SF1 27 38 4.6E-126 T 22-04-2016 SII_RS00555 3203f56b5e2c0a338e1f0d664a29d5b8 494 TIGRFAM TIGR00260 thrC: threonine synthase 73 442 1.4E-70 T 22-04-2016 IPR004450 Threonine synthase-like SII_RS03425 759ecbead23a7c359944ebc7b2b1550b 395 SUPERFAMILY SSF56349 77 366 5.59E-58 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 SII_RS03425 759ecbead23a7c359944ebc7b2b1550b 395 Gene3D G3DSA:1.10.443.10 181 365 1.4E-35 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 SII_RS03425 759ecbead23a7c359944ebc7b2b1550b 395 Pfam PF00589 Phage integrase family 184 365 1.2E-22 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 SII_RS03425 759ecbead23a7c359944ebc7b2b1550b 395 PANTHER PTHR30349 10 394 8.2E-43 T 22-04-2016 SII_RS03425 759ecbead23a7c359944ebc7b2b1550b 395 PANTHER PTHR30349:SF35 10 394 8.2E-43 T 22-04-2016 SII_RS03425 759ecbead23a7c359944ebc7b2b1550b 395 Gene3D G3DSA:1.10.150.130 77 174 2.3E-9 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal SII_RS04050 b786e581b0e143735cd9a15576226319 276 PANTHER PTHR18895 37 273 1.5E-82 T 22-04-2016 SII_RS04050 b786e581b0e143735cd9a15576226319 276 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 42 272 2.4E-65 T 22-04-2016 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 SII_RS04050 b786e581b0e143735cd9a15576226319 276 SUPERFAMILY SSF53335 5 272 1.21E-45 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SII_RS04050 b786e581b0e143735cd9a15576226319 276 PANTHER PTHR18895:SF64 37 273 1.5E-82 T 22-04-2016 SII_RS04050 b786e581b0e143735cd9a15576226319 276 Gene3D G3DSA:1.10.8.10 1 84 3.0E-7 T 22-04-2016 SII_RS04050 b786e581b0e143735cd9a15576226319 276 Gene3D G3DSA:3.40.50.150 86 273 7.4E-64 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SII_RS04050 b786e581b0e143735cd9a15576226319 276 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 33 271 2.4E-81 T 22-04-2016 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 SII_RS04050 b786e581b0e143735cd9a15576226319 276 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 1 275 39.946 T 22-04-2016 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 SII_RS04050 b786e581b0e143735cd9a15576226319 276 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 178 184 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 SII_RS04050 b786e581b0e143735cd9a15576226319 276 Pfam PF05175 Methyltransferase small domain 106 195 7.3E-20 T 22-04-2016 IPR007848 Methyltransferase small domain GO:0008168 SII_RS04075 17a12739979c8702b99429de9d43cdce 421 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 332 352 - T 22-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 SII_RS04075 17a12739979c8702b99429de9d43cdce 421 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 9 415 1.5E-116 T 22-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 SII_RS04075 17a12739979c8702b99429de9d43cdce 421 TIGRFAM TIGR03173 pbuX: xanthine permease 14 417 3.1E-149 T 22-04-2016 IPR017588 Uric acid permease UacT-like GO:0006810|GO:0016021 SII_RS04075 17a12739979c8702b99429de9d43cdce 421 PANTHER PTHR11119 10 421 2.5E-107 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 SII_RS04075 17a12739979c8702b99429de9d43cdce 421 Pfam PF00860 Permease family 10 381 2.5E-99 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 SII_RS03385 02f04a3abd42e5c1520485725f909583 158 PANTHER PTHR10245:SF55 1 157 3.0E-83 T 22-04-2016 SII_RS03385 02f04a3abd42e5c1520485725f909583 158 SUPERFAMILY SSF47413 2 64 1.4E-16 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SII_RS03385 02f04a3abd42e5c1520485725f909583 158 Pfam PF01381 Helix-turn-helix 6 58 2.6E-13 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SII_RS03385 02f04a3abd42e5c1520485725f909583 158 PANTHER PTHR10245 1 157 3.0E-83 T 22-04-2016 SII_RS03385 02f04a3abd42e5c1520485725f909583 158 SMART SM00530 5 60 3.2E-13 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SII_RS03385 02f04a3abd42e5c1520485725f909583 158 Gene3D G3DSA:1.10.8.130 72 150 7.1E-4 T 22-04-2016 IPR015090 Bacterial epsilon antitoxin GO:0009636|GO:0015643|GO:0031342 SII_RS03385 02f04a3abd42e5c1520485725f909583 158 Gene3D G3DSA:1.10.260.40 1 65 3.2E-19 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SII_RS03720 1e1d046876827d34c22de0a1810eadee 779 PANTHER PTHR23355 3 777 3.1E-233 T 22-04-2016 SII_RS03720 1e1d046876827d34c22de0a1810eadee 779 Pfam PF00575 S1 RNA binding domain 622 701 1.1E-14 T 22-04-2016 IPR003029 S1 domain GO:0003676 SII_RS03720 1e1d046876827d34c22de0a1810eadee 779 SUPERFAMILY SSF50249 209 621 2.17E-138 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SII_RS03720 1e1d046876827d34c22de0a1810eadee 779 SMART SM00316 622 703 1.2E-13 T 22-04-2016 IPR022967 RNA-binding domain, S1 SII_RS03720 1e1d046876827d34c22de0a1810eadee 779 ProSitePatterns PS01175 Ribonuclease II family signature. 545 569 - T 22-04-2016 IPR022966 Ribonuclease II/R, conserved site SII_RS03720 1e1d046876827d34c22de0a1810eadee 779 SMART SM00955 249 578 1.5E-166 T 22-04-2016 SII_RS03720 1e1d046876827d34c22de0a1810eadee 779 PANTHER PTHR23355:SF9 3 777 3.1E-233 T 22-04-2016 SII_RS03720 1e1d046876827d34c22de0a1810eadee 779 Pfam PF00773 RNB domain 249 575 2.0E-114 T 22-04-2016 SII_RS03720 1e1d046876827d34c22de0a1810eadee 779 SUPERFAMILY SSF50249 61 132 7.89E-13 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SII_RS03720 1e1d046876827d34c22de0a1810eadee 779 Gene3D G3DSA:2.40.50.140 624 703 6.6E-17 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SII_RS03720 1e1d046876827d34c22de0a1810eadee 779 SUPERFAMILY SSF50249 623 700 1.72E-16 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SII_RS03720 1e1d046876827d34c22de0a1810eadee 779 Hamap MF_01895 Ribonuclease R [rnr]. 18 703 55.308 T 22-04-2016 IPR011805 Ribonuclease R GO:0003723|GO:0004518 SII_RS03720 1e1d046876827d34c22de0a1810eadee 779 TIGRFAM TIGR02063 RNase_R: ribonuclease R 1 703 1.2E-243 T 22-04-2016 IPR011805 Ribonuclease R GO:0003723|GO:0004518 SII_RS03720 1e1d046876827d34c22de0a1810eadee 779 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 61 701 1.1E-180 T 22-04-2016 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 SII_RS03720 1e1d046876827d34c22de0a1810eadee 779 Pfam PF08206 Ribonuclease B OB domain 69 125 4.7E-17 T 22-04-2016 IPR013223 Ribonuclease B, N-terminal OB domain SII_RS05705 ec4f1f9f7b98526873e74270b9fb554a 819 SUPERFAMILY SSF52540 257 310 1.15E-23 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS05705 ec4f1f9f7b98526873e74270b9fb554a 819 SUPERFAMILY SSF52540 570 584 1.15E-23 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS05705 ec4f1f9f7b98526873e74270b9fb554a 819 SUPERFAMILY SSF52540 612 775 1.15E-23 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS05705 ec4f1f9f7b98526873e74270b9fb554a 819 SUPERFAMILY SSF52540 394 463 1.15E-23 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS05705 ec4f1f9f7b98526873e74270b9fb554a 819 SUPERFAMILY SSF53098 7 241 7.99E-47 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SII_RS05705 ec4f1f9f7b98526873e74270b9fb554a 819 SMART SM00479 7 171 4.2E-32 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III SII_RS05705 ec4f1f9f7b98526873e74270b9fb554a 819 PANTHER PTHR30231 6 462 6.8E-159 T 22-04-2016 SII_RS05705 ec4f1f9f7b98526873e74270b9fb554a 819 SMART SM00487 241 614 0.0019 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain SII_RS05705 ec4f1f9f7b98526873e74270b9fb554a 819 TIGRFAM TIGR01407 dinG_rel: putative DnaQ family exonuclease/DinG family helicase 7 518 1.6E-171 T 22-04-2016 IPR006310 DnaQ exonuclease/DinG helicase, predicted SII_RS05705 ec4f1f9f7b98526873e74270b9fb554a 819 Pfam PF00929 Exonuclease 10 162 4.1E-25 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III SII_RS05705 ec4f1f9f7b98526873e74270b9fb554a 819 PANTHER PTHR30231:SF8 6 462 6.8E-159 T 22-04-2016 SII_RS05705 ec4f1f9f7b98526873e74270b9fb554a 819 SMART SM00491 655 781 3.6E-7 T 22-04-2016 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 SII_RS05705 ec4f1f9f7b98526873e74270b9fb554a 819 Gene3D G3DSA:3.40.50.300 629 712 2.3E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS05705 ec4f1f9f7b98526873e74270b9fb554a 819 Gene3D G3DSA:3.40.50.300 745 816 2.3E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS05705 ec4f1f9f7b98526873e74270b9fb554a 819 Gene3D G3DSA:3.40.50.300 572 582 3.5E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS05705 ec4f1f9f7b98526873e74270b9fb554a 819 Gene3D G3DSA:3.40.50.300 255 308 3.5E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS05705 ec4f1f9f7b98526873e74270b9fb554a 819 Gene3D G3DSA:3.40.50.300 381 463 3.5E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS05705 ec4f1f9f7b98526873e74270b9fb554a 819 Gene3D G3DSA:3.30.420.10 4 172 7.6E-48 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SII_RS05705 ec4f1f9f7b98526873e74270b9fb554a 819 Pfam PF13307 Helicase C-terminal domain 648 794 7.9E-25 T 22-04-2016 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 SII_RS05705 ec4f1f9f7b98526873e74270b9fb554a 819 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 4 173 3.1E-30 T 22-04-2016 IPR006054 DNA polymerase III, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SII_RS05705 ec4f1f9f7b98526873e74270b9fb554a 819 Pfam PF00270 DEAD/DEAH box helicase 255 315 4.4E-7 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 SII_RS07065 d0ecb6d30cb8083c6e99c1b9968c5f82 384 SUPERFAMILY SSF51338 2 52 4.09E-13 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SII_RS07065 d0ecb6d30cb8083c6e99c1b9968c5f82 384 SUPERFAMILY SSF51338 351 383 4.09E-13 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SII_RS07065 d0ecb6d30cb8083c6e99c1b9968c5f82 384 Gene3D G3DSA:3.20.20.140 55 335 1.5E-96 T 22-04-2016 SII_RS07065 d0ecb6d30cb8083c6e99c1b9968c5f82 384 Gene3D G3DSA:2.30.40.10 30 54 7.7E-8 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SII_RS07065 d0ecb6d30cb8083c6e99c1b9968c5f82 384 PIRSF PIRSF038994 4 384 3.1E-116 T 22-04-2016 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395 SII_RS07065 d0ecb6d30cb8083c6e99c1b9968c5f82 384 PANTHER PTHR11113 9 379 9.3E-148 T 22-04-2016 SII_RS07065 d0ecb6d30cb8083c6e99c1b9968c5f82 384 SUPERFAMILY SSF51556 53 351 8.04E-93 T 22-04-2016 IPR032466 Metal-dependent hydrolase SII_RS07065 d0ecb6d30cb8083c6e99c1b9968c5f82 384 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 35 377 2.0E-86 T 22-04-2016 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395 SII_RS07065 d0ecb6d30cb8083c6e99c1b9968c5f82 384 Gene3D G3DSA:2.30.40.10 336 367 4.2E-8 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SII_RS07065 d0ecb6d30cb8083c6e99c1b9968c5f82 384 Pfam PF01979 Amidohydrolase family 50 368 8.9E-19 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 SII_RS07065 d0ecb6d30cb8083c6e99c1b9968c5f82 384 PANTHER PTHR11113:SF7 9 379 9.3E-148 T 22-04-2016 SII_RS01505 786621c4e3a8b1ce605b4e5e5f06be60 314 Gene3D G3DSA:1.20.58.340 140 233 1.6E-4 T 22-04-2016 SII_RS01505 786621c4e3a8b1ce605b4e5e5f06be60 314 PANTHER PTHR21535 12 314 1.0E-102 T 22-04-2016 SII_RS01505 786621c4e3a8b1ce605b4e5e5f06be60 314 Gene3D G3DSA:1.20.58.340 235 313 4.1E-20 T 22-04-2016 SII_RS01505 786621c4e3a8b1ce605b4e5e5f06be60 314 SUPERFAMILY SSF144083 247 311 1.7E-13 T 22-04-2016 SII_RS01505 786621c4e3a8b1ce605b4e5e5f06be60 314 SUPERFAMILY SSF143865 16 246 8.76E-48 T 22-04-2016 SII_RS01505 786621c4e3a8b1ce605b4e5e5f06be60 314 Gene3D G3DSA:3.30.460.20 7 112 5.7E-4 T 22-04-2016 SII_RS01505 786621c4e3a8b1ce605b4e5e5f06be60 314 Pfam PF01544 CorA-like Mg2+ transporter protein 21 308 1.9E-61 T 22-04-2016 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 SII_RS01505 786621c4e3a8b1ce605b4e5e5f06be60 314 PANTHER PTHR21535:SF40 12 314 1.0E-102 T 22-04-2016 SII_RS06550 c9cddd2e6c6834642765b61e80d5309e 180 PANTHER PTHR33231 1 180 6.4E-58 T 22-04-2016 SII_RS06550 c9cddd2e6c6834642765b61e80d5309e 180 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 5 96 6.8E-27 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 SII_RS06550 c9cddd2e6c6834642765b61e80d5309e 180 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 3 102 1.2E-28 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 SII_RS06550 c9cddd2e6c6834642765b61e80d5309e 180 SUPERFAMILY SSF69754 3 113 9.81E-30 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 SII_RS06550 c9cddd2e6c6834642765b61e80d5309e 180 Gene3D G3DSA:3.30.160.100 3 95 1.1E-31 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 SII_RS06550 c9cddd2e6c6834642765b61e80d5309e 180 Pfam PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus 122 176 2.8E-25 T 22-04-2016 IPR032528 Sigma 54 modulation/S30EA ribosomal protein, C-terminal SII_RS00385 a6f38013246f2a46c951122f58868b15 332 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 332 165.506 T 22-04-2016 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 SII_RS00385 a6f38013246f2a46c951122f58868b15 332 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 250 332 3.0E-37 T 22-04-2016 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 SII_RS00385 a6f38013246f2a46c951122f58868b15 332 SMART SM00382 51 184 4.5E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain SII_RS00385 a6f38013246f2a46c951122f58868b15 332 Gene3D G3DSA:1.10.10.10 257 328 3.6E-32 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SII_RS00385 a6f38013246f2a46c951122f58868b15 332 SUPERFAMILY SSF52540 20 250 2.27E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS00385 a6f38013246f2a46c951122f58868b15 332 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 4 235 2.8E-114 T 22-04-2016 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 SII_RS00385 a6f38013246f2a46c951122f58868b15 332 PANTHER PTHR13779 1 329 5.8E-173 T 22-04-2016 SII_RS00385 a6f38013246f2a46c951122f58868b15 332 Gene3D G3DSA:1.10.8.60 183 255 5.0E-33 T 22-04-2016 SII_RS00385 a6f38013246f2a46c951122f58868b15 332 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 24 326 7.7E-141 T 22-04-2016 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 SII_RS00385 a6f38013246f2a46c951122f58868b15 332 SUPERFAMILY SSF46785 257 328 8.25E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SII_RS00385 a6f38013246f2a46c951122f58868b15 332 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 253 326 2.9E-31 T 22-04-2016 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 SII_RS00385 a6f38013246f2a46c951122f58868b15 332 PANTHER PTHR13779:SF25 1 329 5.8E-173 T 22-04-2016 SII_RS00385 a6f38013246f2a46c951122f58868b15 332 Gene3D G3DSA:3.40.50.300 20 175 7.5E-31 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS05260 cd96752f717cb1d4037dbe43d1eba64f 724 PIRSF PIRSF005091 1 647 6.4E-173 T 22-04-2016 IPR012160 Lipoteichoic acid synthase-like KEGG: 00440+2.7.8.-|KEGG: 00513+2.7.8.-|KEGG: 00540+2.7.8.-|KEGG: 00564+2.7.8.-|KEGG: 00600+2.7.8.-|KEGG: 00770+2.7.8.-|UniPathway: UPA00556 SII_RS05260 cd96752f717cb1d4037dbe43d1eba64f 724 Gene3D G3DSA:3.40.720.10 255 570 4.2E-37 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 SII_RS05260 cd96752f717cb1d4037dbe43d1eba64f 724 PANTHER PTHR10342:SF214 226 585 1.9E-98 T 22-04-2016 SII_RS05260 cd96752f717cb1d4037dbe43d1eba64f 724 PANTHER PTHR10342 226 585 1.9E-98 T 22-04-2016 SII_RS05260 cd96752f717cb1d4037dbe43d1eba64f 724 PANTHER PTHR10342 631 657 1.9E-98 T 22-04-2016 SII_RS05260 cd96752f717cb1d4037dbe43d1eba64f 724 PANTHER PTHR10342:SF214 631 657 1.9E-98 T 22-04-2016 SII_RS05260 cd96752f717cb1d4037dbe43d1eba64f 724 SUPERFAMILY SSF53649 252 660 3.18E-68 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 SII_RS05260 cd96752f717cb1d4037dbe43d1eba64f 724 Pfam PF00884 Sulfatase 254 557 3.5E-36 T 22-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 SII_RS07980 b7a9af2cd057f70237c0632ef63b3a48 599 Pfam PF08439 Oligopeptidase F 121 177 1.3E-5 T 22-04-2016 IPR013647 Oligopeptidase F, N-terminal domain SII_RS07980 b7a9af2cd057f70237c0632ef63b3a48 599 SUPERFAMILY SSF55486 6 577 3.18E-92 T 22-04-2016 SII_RS07980 b7a9af2cd057f70237c0632ef63b3a48 599 PANTHER PTHR11804:SF45 14 597 2.1E-252 T 22-04-2016 SII_RS07980 b7a9af2cd057f70237c0632ef63b3a48 599 Gene3D G3DSA:3.40.390.10 377 421 5.6E-7 T 22-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 SII_RS07980 b7a9af2cd057f70237c0632ef63b3a48 599 TIGRFAM TIGR00181 pepF: oligoendopeptidase F 7 591 6.2E-199 T 22-04-2016 IPR004438 Peptidase M3B, oligoendopeptidase F GO:0004222|GO:0006508 SII_RS07980 b7a9af2cd057f70237c0632ef63b3a48 599 PANTHER PTHR11804 14 597 2.1E-252 T 22-04-2016 SII_RS07980 b7a9af2cd057f70237c0632ef63b3a48 599 Pfam PF01432 Peptidase family M3 200 580 2.6E-39 T 22-04-2016 IPR001567 Peptidase M3A/M3B GO:0004222|GO:0006508 SII_RS06540 cfeed596e32e4edd4823505035d2ae3a 165 ProDom PD016147 LIGASE LYASE CITRATE PRO-3S-LYASE SYNTHETASE TRANSFERASE CYTIDYLTRANSFERASE-RELATED:CITRATE ACETATE:SH-CITRATE CITC PLASMID 13 75 5.0E-6 T 22-04-2016 SII_RS06540 cfeed596e32e4edd4823505035d2ae3a 165 PANTHER PTHR21342:SF1 1 158 5.1E-55 T 22-04-2016 SII_RS06540 cfeed596e32e4edd4823505035d2ae3a 165 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 5 56 2.8E-14 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 SII_RS06540 cfeed596e32e4edd4823505035d2ae3a 165 SUPERFAMILY SSF52374 4 159 3.38E-38 T 22-04-2016 SII_RS06540 cfeed596e32e4edd4823505035d2ae3a 165 Pfam PF01467 Cytidylyltransferase-like 7 136 2.9E-16 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 SII_RS06540 cfeed596e32e4edd4823505035d2ae3a 165 PANTHER PTHR21342 1 158 5.1E-55 T 22-04-2016 SII_RS06540 cfeed596e32e4edd4823505035d2ae3a 165 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 4 161 31.05 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 SII_RS06540 cfeed596e32e4edd4823505035d2ae3a 165 Gene3D G3DSA:3.40.50.620 3 160 2.9E-47 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SII_RS06540 cfeed596e32e4edd4823505035d2ae3a 165 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 6 159 1.4E-55 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 SII_RS06540 cfeed596e32e4edd4823505035d2ae3a 165 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 22 43 3.4E-31 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 SII_RS06540 cfeed596e32e4edd4823505035d2ae3a 165 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 4 22 3.4E-31 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 SII_RS06540 cfeed596e32e4edd4823505035d2ae3a 165 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 88 104 3.4E-31 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 SII_RS06540 cfeed596e32e4edd4823505035d2ae3a 165 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 51 75 3.4E-31 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 SII_RS06540 cfeed596e32e4edd4823505035d2ae3a 165 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 115 137 3.4E-31 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 SII_RS05605 8422ba066a05d8e643f5fedea7879353 103 Gene3D G3DSA:3.40.50.270 1 102 1.4E-34 T 22-04-2016 SII_RS05605 8422ba066a05d8e643f5fedea7879353 103 PANTHER PTHR34581:SF2 2 103 9.6E-35 T 22-04-2016 SII_RS05605 8422ba066a05d8e643f5fedea7879353 103 PANTHER PTHR34581 2 103 9.6E-35 T 22-04-2016 SII_RS05605 8422ba066a05d8e643f5fedea7879353 103 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 3 94 1.5E-19 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 SII_RS05605 8422ba066a05d8e643f5fedea7879353 103 SUPERFAMILY SSF52794 1 101 2.41E-33 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 SII_RS09485 5de314f8bb8a1bc633add9eb4e72ab81 232 PANTHER PTHR10366:SF39 4 232 6.5E-67 T 22-04-2016 SII_RS09485 5de314f8bb8a1bc633add9eb4e72ab81 232 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 5 232 3.5E-81 T 22-04-2016 IPR005886 UDP-glucose 4-epimerase GalE GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|UniPathway: UPA00214 SII_RS09485 5de314f8bb8a1bc633add9eb4e72ab81 232 PANTHER PTHR10366 4 232 6.5E-67 T 22-04-2016 SII_RS09485 5de314f8bb8a1bc633add9eb4e72ab81 232 Gene3D G3DSA:3.40.50.720 2 232 4.0E-70 T 22-04-2016 IPR016040 NAD(P)-binding domain SII_RS09485 5de314f8bb8a1bc633add9eb4e72ab81 232 Pfam PF01370 NAD dependent epimerase/dehydratase family 5 232 4.5E-53 T 22-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 SII_RS09485 5de314f8bb8a1bc633add9eb4e72ab81 232 SUPERFAMILY SSF51735 2 232 4.9E-66 T 22-04-2016 IPR016040 NAD(P)-binding domain SII_RS06960 7ef0f28e6325c901205cb8d3086414c4 136 Pfam PF14526 Integron-associated effector binding protein 19 125 4.2E-10 T 22-04-2016 IPR029441 Integron-associated effector binding protein SII_RS06960 7ef0f28e6325c901205cb8d3086414c4 136 Gene3D G3DSA:3.20.80.10 8 132 1.1E-31 T 22-04-2016 IPR011256 Regulatory factor, effector binding domain SII_RS09285 cb624fc1d050f6a00206253a1f31aeec 515 TIGRFAM TIGR01734 D-ala-DACP-lig: D-alanine--poly(phosphoribitol) ligase, subunit 1 8 514 3.6E-236 T 22-04-2016 IPR010072 D-alanine--poly(phosphoribitol) ligase subunit 1 GO:0005524|GO:0047473|GO:0070395 KEGG: 00473+6.1.1.13|UniPathway: UPA00556 SII_RS09285 cb624fc1d050f6a00206253a1f31aeec 515 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 34 435 9.8E-105 T 22-04-2016 IPR010071 Amino acid adenylation domain SII_RS09285 cb624fc1d050f6a00206253a1f31aeec 515 Gene3D G3DSA:3.30.300.30 406 511 2.2E-23 T 22-04-2016 SII_RS09285 cb624fc1d050f6a00206253a1f31aeec 515 SUPERFAMILY SSF56801 5 512 2.75E-109 T 22-04-2016 SII_RS09285 cb624fc1d050f6a00206253a1f31aeec 515 PANTHER PTHR24095 6 503 1.6E-152 T 22-04-2016 SII_RS09285 cb624fc1d050f6a00206253a1f31aeec 515 Pfam PF13193 AMP-binding enzyme C-terminal domain 423 503 1.5E-6 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain SII_RS09285 cb624fc1d050f6a00206253a1f31aeec 515 ProSitePatterns PS00455 Putative AMP-binding domain signature. 153 164 - T 22-04-2016 IPR020845 AMP-binding, conserved site SII_RS09285 cb624fc1d050f6a00206253a1f31aeec 515 Hamap MF_00593 D-alanine--poly(phosphoribitol) ligase subunit 1 [dltA]. 1 515 277.833 T 22-04-2016 IPR010072 D-alanine--poly(phosphoribitol) ligase subunit 1 GO:0005524|GO:0047473|GO:0070395 KEGG: 00473+6.1.1.13|UniPathway: UPA00556 SII_RS09285 cb624fc1d050f6a00206253a1f31aeec 515 Gene3D G3DSA:3.40.50.980 9 159 2.0E-27 T 22-04-2016 SII_RS09285 cb624fc1d050f6a00206253a1f31aeec 515 Pfam PF00501 AMP-binding enzyme 16 411 6.7E-77 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 SII_RS09285 cb624fc1d050f6a00206253a1f31aeec 515 Gene3D G3DSA:2.30.38.10 337 405 1.9E-18 T 22-04-2016 SII_RS09285 cb624fc1d050f6a00206253a1f31aeec 515 Gene3D G3DSA:3.40.50.980 160 317 1.7E-36 T 22-04-2016 SII_RS04680 bd4f2f6868f97b44d715397f3fea3605 298 Pfam PF01479 S4 domain 11 55 1.3E-10 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SII_RS04680 bd4f2f6868f97b44d715397f3fea3605 298 PANTHER PTHR11079 11 295 7.9E-128 T 22-04-2016 SII_RS04680 bd4f2f6868f97b44d715397f3fea3605 298 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 8 294 1.9E-94 T 22-04-2016 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 SII_RS04680 bd4f2f6868f97b44d715397f3fea3605 298 Pfam PF00849 RNA pseudouridylate synthase 83 235 3.2E-34 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 SII_RS04680 bd4f2f6868f97b44d715397f3fea3605 298 Gene3D G3DSA:3.10.290.10 9 57 1.5E-15 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SII_RS04680 bd4f2f6868f97b44d715397f3fea3605 298 SUPERFAMILY SSF55174 9 95 8.58E-14 T 22-04-2016 SII_RS04680 bd4f2f6868f97b44d715397f3fea3605 298 PANTHER PTHR11079:SF71 11 295 7.9E-128 T 22-04-2016 SII_RS04680 bd4f2f6868f97b44d715397f3fea3605 298 SMART SM00363 10 73 8.8E-9 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SII_RS04680 bd4f2f6868f97b44d715397f3fea3605 298 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 128 142 - T 22-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 SII_RS04680 bd4f2f6868f97b44d715397f3fea3605 298 SUPERFAMILY SSF55120 68 294 8.22E-78 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 SII_RS00225 8dbde3b04d4411555bd9888bc5a8d46a 235 SUPERFAMILY SSF56104 12 232 2.68E-78 T 22-04-2016 SII_RS00225 8dbde3b04d4411555bd9888bc5a8d46a 235 ProSitePatterns PS01058 SAICAR synthetase signature 2. 172 180 - T 22-04-2016 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 SII_RS00225 8dbde3b04d4411555bd9888bc5a8d46a 235 PANTHER PTHR11609:SF2 5 231 2.6E-114 T 22-04-2016 SII_RS00225 8dbde3b04d4411555bd9888bc5a8d46a 235 ProSitePatterns PS01057 SAICAR synthetase signature 1. 85 99 - T 22-04-2016 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 SII_RS00225 8dbde3b04d4411555bd9888bc5a8d46a 235 Gene3D G3DSA:3.30.200.20 5 92 1.8E-38 T 22-04-2016 SII_RS00225 8dbde3b04d4411555bd9888bc5a8d46a 235 Gene3D G3DSA:3.30.470.20 93 218 1.4E-50 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 SII_RS00225 8dbde3b04d4411555bd9888bc5a8d46a 235 PANTHER PTHR11609 5 231 2.6E-114 T 22-04-2016 SII_RS00225 8dbde3b04d4411555bd9888bc5a8d46a 235 Pfam PF01259 SAICAR synthetase 5 226 4.4E-62 T 22-04-2016 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 SII_RS00225 8dbde3b04d4411555bd9888bc5a8d46a 235 TIGRFAM TIGR00081 purC: phosphoribosylaminoimidazolesuccinocarboxamide synthase 6 204 1.4E-68 T 22-04-2016 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 SII_RS00225 8dbde3b04d4411555bd9888bc5a8d46a 235 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 3 233 32.346 T 22-04-2016 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 SII_RS06650 425b9dea18d8dcbe2527531dcaaabeb2 258 PIRSF PIRSF000706 4 258 9.6E-47 T 22-04-2016 IPR024165 Aminoglycoside 3-phosphotransferase GO:0005524|GO:0016773|GO:0046677 SII_RS06650 425b9dea18d8dcbe2527531dcaaabeb2 258 Pfam PF01636 Phosphotransferase enzyme family 43 239 7.9E-19 T 22-04-2016 IPR002575 Aminoglycoside phosphotransferase SII_RS06650 425b9dea18d8dcbe2527531dcaaabeb2 258 SUPERFAMILY SSF56112 28 256 3.74E-32 T 22-04-2016 IPR011009 Protein kinase-like domain SII_RS06650 425b9dea18d8dcbe2527531dcaaabeb2 258 Gene3D G3DSA:3.90.1200.10 95 257 2.6E-32 T 22-04-2016 SII_RS06650 425b9dea18d8dcbe2527531dcaaabeb2 258 Gene3D G3DSA:3.30.200.20 12 87 7.4E-6 T 22-04-2016 SII_RS02260 da370ed0d48e4bf20ccc78b220309470 239 Pfam PF03306 Alpha-acetolactate decarboxylase 7 227 1.1E-76 T 22-04-2016 IPR005128 Alpha-acetolactate decarboxylase GO:0045151|GO:0047605 KEGG: 00650+4.1.1.5|KEGG: 00660+4.1.1.5|MetaCyc: PWY-5939|UniPathway: UPA00626 SII_RS02260 da370ed0d48e4bf20ccc78b220309470 239 PIRSF PIRSF001332 1 239 1.6E-92 T 22-04-2016 IPR005128 Alpha-acetolactate decarboxylase GO:0045151|GO:0047605 KEGG: 00650+4.1.1.5|KEGG: 00660+4.1.1.5|MetaCyc: PWY-5939|UniPathway: UPA00626 SII_RS02260 da370ed0d48e4bf20ccc78b220309470 239 TIGRFAM TIGR01252 acetolac_decarb: alpha-acetolactate decarboxylase 6 239 1.2E-86 T 22-04-2016 IPR005128 Alpha-acetolactate decarboxylase GO:0045151|GO:0047605 KEGG: 00650+4.1.1.5|KEGG: 00660+4.1.1.5|MetaCyc: PWY-5939|UniPathway: UPA00626 SII_RS02260 da370ed0d48e4bf20ccc78b220309470 239 SUPERFAMILY SSF117856 6 239 1.92E-76 T 22-04-2016 SII_RS02260 da370ed0d48e4bf20ccc78b220309470 239 PANTHER PTHR35524 7 239 1.1E-74 T 22-04-2016 SII_RS02260 da370ed0d48e4bf20ccc78b220309470 239 Gene3D G3DSA:3.30.1330.80 92 205 9.3E-46 T 22-04-2016 SII_RS01870 a0dc223b19522c042042dc4117dc23ae 241 Pfam PF01479 S4 domain 1 47 5.8E-14 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SII_RS01870 a0dc223b19522c042042dc4117dc23ae 241 Gene3D G3DSA:3.10.290.10 1 63 5.3E-27 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SII_RS01870 a0dc223b19522c042042dc4117dc23ae 241 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 65 225 1.5E-47 T 22-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 SII_RS01870 a0dc223b19522c042042dc4117dc23ae 241 Pfam PF00849 RNA pseudouridylate synthase 61 195 5.4E-20 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 SII_RS01870 a0dc223b19522c042042dc4117dc23ae 241 SMART SM00363 1 64 2.1E-16 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SII_RS01870 a0dc223b19522c042042dc4117dc23ae 241 PANTHER PTHR21600 1 241 2.4E-79 T 22-04-2016 SII_RS01870 a0dc223b19522c042042dc4117dc23ae 241 SUPERFAMILY SSF55174 1 56 1.45E-16 T 22-04-2016 SII_RS01870 a0dc223b19522c042042dc4117dc23ae 241 PANTHER PTHR21600:SF2 1 241 2.4E-79 T 22-04-2016 SII_RS01870 a0dc223b19522c042042dc4117dc23ae 241 SUPERFAMILY SSF55120 45 235 1.39E-45 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 SII_RS01870 a0dc223b19522c042042dc4117dc23ae 241 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 98 112 - T 22-04-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 SII_RS02655 3f612d0733fa18c57507eec5532f4111 203 PANTHER PTHR30328 1 66 5.1E-12 T 22-04-2016 SII_RS02655 3f612d0733fa18c57507eec5532f4111 203 Gene3D G3DSA:1.10.357.10 1 195 6.0E-29 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 SII_RS02655 3f612d0733fa18c57507eec5532f4111 203 SUPERFAMILY SSF46689 5 66 3.49E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SII_RS02655 3f612d0733fa18c57507eec5532f4111 203 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 58 9.1E-12 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SII_RS02655 3f612d0733fa18c57507eec5532f4111 203 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 2.6E-6 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SII_RS02655 3f612d0733fa18c57507eec5532f4111 203 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 2.6E-6 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SII_RS01085 0d4ede5a825832fedfeb7b7c45264284 391 SUPERFAMILY SSF51905 1 191 4.04E-50 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SII_RS01085 0d4ede5a825832fedfeb7b7c45264284 391 SUPERFAMILY SSF51905 332 386 4.04E-50 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SII_RS01085 0d4ede5a825832fedfeb7b7c45264284 391 SUPERFAMILY SSF160996 193 335 1.57E-33 T 22-04-2016 SII_RS01085 0d4ede5a825832fedfeb7b7c45264284 391 Pfam PF03486 HI0933-like protein 5 386 5.2E-142 T 22-04-2016 SII_RS01085 0d4ede5a825832fedfeb7b7c45264284 391 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 6 386 5.1E-136 T 22-04-2016 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like SII_RS01085 0d4ede5a825832fedfeb7b7c45264284 391 PANTHER PTHR10617 1 288 3.7E-120 T 22-04-2016 SII_RS01085 0d4ede5a825832fedfeb7b7c45264284 391 PANTHER PTHR10617 325 386 3.7E-120 T 22-04-2016 SII_RS01085 0d4ede5a825832fedfeb7b7c45264284 391 Gene3D G3DSA:2.40.30.10 192 270 8.2E-24 T 22-04-2016 SII_RS01085 0d4ede5a825832fedfeb7b7c45264284 391 PANTHER PTHR10617:SF103 1 288 3.7E-120 T 22-04-2016 SII_RS01085 0d4ede5a825832fedfeb7b7c45264284 391 PANTHER PTHR10617:SF103 325 386 3.7E-120 T 22-04-2016 SII_RS01085 0d4ede5a825832fedfeb7b7c45264284 391 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 158 167 1.0E-6 T 22-04-2016 SII_RS01085 0d4ede5a825832fedfeb7b7c45264284 391 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 1.0E-6 T 22-04-2016 SII_RS01085 0d4ede5a825832fedfeb7b7c45264284 391 Gene3D G3DSA:3.50.50.60 334 386 2.7E-48 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SII_RS01085 0d4ede5a825832fedfeb7b7c45264284 391 Gene3D G3DSA:3.50.50.60 2 189 2.7E-48 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SII_RS01085 0d4ede5a825832fedfeb7b7c45264284 391 Gene3D G3DSA:1.10.8.260 271 316 7.1E-8 T 22-04-2016 IPR023166 HI0933 insert-like domain SII_RS02470 f81cfdb028223cd83f69afbc92957c15 224 TIGRFAM TIGR01446 DnaD_dom: DnaD domain protein 124 196 6.4E-28 T 22-04-2016 IPR006343 Replication protein, DnaD/DnaB domain SII_RS02470 f81cfdb028223cd83f69afbc92957c15 224 PANTHER PTHR41274 1 224 2.4E-65 T 22-04-2016 SII_RS02470 f81cfdb028223cd83f69afbc92957c15 224 Gene3D G3DSA:1.10.10.630 121 196 9.5E-31 T 22-04-2016 IPR006343 Replication protein, DnaD/DnaB domain SII_RS02470 f81cfdb028223cd83f69afbc92957c15 224 Pfam PF13412 Winged helix-turn-helix DNA-binding 48 78 6.8E-5 T 22-04-2016 SII_RS02470 f81cfdb028223cd83f69afbc92957c15 224 SUPERFAMILY SSF158499 124 190 2.09E-19 T 22-04-2016 IPR006343 Replication protein, DnaD/DnaB domain SII_RS02470 f81cfdb028223cd83f69afbc92957c15 224 Pfam PF07261 Replication initiation and membrane attachment 126 197 8.0E-25 T 22-04-2016 IPR006343 Replication protein, DnaD/DnaB domain SII_RS07705 35ebe6d58f8f632407e45fe168717433 445 Hamap MF_01221 UPF0210 protein . 1 445 52.263 T 22-04-2016 IPR007841 Uncharacterised protein family UPF0210 SII_RS07705 35ebe6d58f8f632407e45fe168717433 445 PANTHER PTHR37560 1 445 2.5E-251 T 22-04-2016 SII_RS07705 35ebe6d58f8f632407e45fe168717433 445 Pfam PF05167 Uncharacterised ACR (DUF711) 12 409 1.2E-170 T 22-04-2016 IPR007841 Uncharacterised protein family UPF0210 SII_RS07705 35ebe6d58f8f632407e45fe168717433 445 SUPERFAMILY SSF51998 2 440 3.84E-179 T 22-04-2016 SII_RS07705 35ebe6d58f8f632407e45fe168717433 445 PANTHER PTHR37560:SF2 1 445 2.5E-251 T 22-04-2016 SII_RS07705 35ebe6d58f8f632407e45fe168717433 445 Gene3D G3DSA:3.20.70.20 1 445 3.3E-218 T 22-04-2016 SII_RS08310 081c628e5014b4aa816c22d1b604dfad 235 SUPERFAMILY SSF53639 6 225 1.24E-72 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal SII_RS08310 081c628e5014b4aa816c22d1b604dfad 235 PANTHER PTHR22789:SF8 1 233 9.4E-144 T 22-04-2016 SII_RS08310 081c628e5014b4aa816c22d1b604dfad 235 PANTHER PTHR22789 1 233 9.4E-144 T 22-04-2016 SII_RS08310 081c628e5014b4aa816c22d1b604dfad 235 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 10 198 5.5E-46 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal SII_RS08310 081c628e5014b4aa816c22d1b604dfad 235 SMART SM01007 10 200 3.9E-70 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal SII_RS08310 081c628e5014b4aa816c22d1b604dfad 235 Gene3D G3DSA:3.40.225.10 6 233 2.0E-74 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal SII_RS01350 edf270ee3725b29afc1d908a87d66557 180 Gene3D G3DSA:3.40.630.30 2 158 5.4E-20 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SII_RS01350 edf270ee3725b29afc1d908a87d66557 180 Pfam PF13302 Acetyltransferase (GNAT) domain 42 151 3.2E-11 T 22-04-2016 IPR000182 GNAT domain GO:0008080 SII_RS01350 edf270ee3725b29afc1d908a87d66557 180 SUPERFAMILY SSF55729 2 158 5.78E-20 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SII_RS01350 edf270ee3725b29afc1d908a87d66557 180 PANTHER PTHR39173 3 175 8.7E-38 T 22-04-2016 SII_RS03660 4e41dce2946383d8127fe1aaf949cc9e 576 Gene3D G3DSA:3.40.50.300 332 571 1.1E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS03660 4e41dce2946383d8127fe1aaf949cc9e 576 SUPERFAMILY SSF52540 330 568 1.13E-78 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS03660 4e41dce2946383d8127fe1aaf949cc9e 576 PANTHER PTHR24221 1 569 1.1E-159 T 22-04-2016 SII_RS03660 4e41dce2946383d8127fe1aaf949cc9e 576 ProSitePatterns PS00211 ABC transporters family signature. 470 484 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SII_RS03660 4e41dce2946383d8127fe1aaf949cc9e 576 Gene3D G3DSA:1.20.1560.10 3 313 1.7E-52 T 22-04-2016 SII_RS03660 4e41dce2946383d8127fe1aaf949cc9e 576 SMART SM00382 358 542 3.1E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain SII_RS03660 4e41dce2946383d8127fe1aaf949cc9e 576 Pfam PF00664 ABC transporter transmembrane region 20 287 1.1E-32 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SII_RS03660 4e41dce2946383d8127fe1aaf949cc9e 576 PANTHER PTHR24221:SF202 1 569 1.1E-159 T 22-04-2016 SII_RS03660 4e41dce2946383d8127fe1aaf949cc9e 576 SUPERFAMILY SSF90123 3 313 5.49E-53 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SII_RS03660 4e41dce2946383d8127fe1aaf949cc9e 576 Pfam PF00005 ABC transporter 349 496 1.5E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SII_RS02225 dc23d9bb5f10e3ef906202a1665575c8 95 ProSitePatterns PS01143 Ribosomal protein L31 signature. 63 84 - T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SII_RS02225 dc23d9bb5f10e3ef906202a1665575c8 95 PRINTS PR01249 Ribosomal protein L31 signature 16 33 1.1E-19 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SII_RS02225 dc23d9bb5f10e3ef906202a1665575c8 95 PRINTS PR01249 Ribosomal protein L31 signature 59 74 1.1E-19 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SII_RS02225 dc23d9bb5f10e3ef906202a1665575c8 95 PRINTS PR01249 Ribosomal protein L31 signature 74 92 1.1E-19 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SII_RS02225 dc23d9bb5f10e3ef906202a1665575c8 95 PANTHER PTHR33280 1 94 3.7E-35 T 22-04-2016 SII_RS02225 dc23d9bb5f10e3ef906202a1665575c8 95 PANTHER PTHR33280:SF2 1 94 3.7E-35 T 22-04-2016 SII_RS02225 dc23d9bb5f10e3ef906202a1665575c8 95 Pfam PF01197 Ribosomal protein L31 15 93 8.4E-29 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SII_RS02225 dc23d9bb5f10e3ef906202a1665575c8 95 TIGRFAM TIGR00105 L31: ribosomal protein bL31 15 94 8.3E-19 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SII_RS02225 dc23d9bb5f10e3ef906202a1665575c8 95 SUPERFAMILY SSF143800 15 94 6.28E-24 T 22-04-2016 SII_RS02225 dc23d9bb5f10e3ef906202a1665575c8 95 Hamap MF_00502 50S ribosomal protein L31 type B [rpmE2]. 15 95 28.782 T 22-04-2016 IPR027493 Ribosomal protein L31 type B GO:0003735|GO:0005622|GO:0005840|GO:0006412 SII_RS00490 7a198523d5fdcaa99da0f9283218d3a3 351 PANTHER PTHR38435 11 350 3.1E-61 T 22-04-2016 SII_RS00490 7a198523d5fdcaa99da0f9283218d3a3 351 SUPERFAMILY SSF51445 12 236 3.16E-57 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily SII_RS00490 7a198523d5fdcaa99da0f9283218d3a3 351 Pfam PF05913 Bacterial protein of unknown function (DUF871) 13 345 2.2E-90 T 22-04-2016 IPR008589 Protein of unknown function DUF871, prokaryotic SII_RS00490 7a198523d5fdcaa99da0f9283218d3a3 351 SUPERFAMILY SSF50891 251 346 6.45E-20 T 22-04-2016 IPR029000 Cyclophilin-like domain SII_RS00490 7a198523d5fdcaa99da0f9283218d3a3 351 PANTHER PTHR38435:SF2 11 350 3.1E-61 T 22-04-2016 SII_RS00490 7a198523d5fdcaa99da0f9283218d3a3 351 Gene3D G3DSA:3.20.20.70 12 237 2.0E-66 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SII_RS00490 7a198523d5fdcaa99da0f9283218d3a3 351 Gene3D G3DSA:2.40.100.10 251 348 8.0E-27 T 22-04-2016 IPR029000 Cyclophilin-like domain SII_RS00645 9c42bef2e946e06ae79c7f630500b083 178 Gene3D G3DSA:2.30.30.30 121 177 2.7E-18 T 22-04-2016 IPR014722 Ribosomal protein L2 domain 2 SII_RS00645 9c42bef2e946e06ae79c7f630500b083 178 SUPERFAMILY SSF50104 124 177 1.81E-12 T 22-04-2016 IPR008991 Translation protein SH3-like domain SII_RS00645 9c42bef2e946e06ae79c7f630500b083 178 PRINTS PR00338 Transcription termination factor NUSG signature 154 170 7.8E-7 T 22-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 SII_RS00645 9c42bef2e946e06ae79c7f630500b083 178 PRINTS PR00338 Transcription termination factor NUSG signature 60 72 7.8E-7 T 22-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 SII_RS00645 9c42bef2e946e06ae79c7f630500b083 178 Pfam PF00467 KOW motif 129 157 1.6E-7 T 22-04-2016 IPR005824 KOW SII_RS00645 9c42bef2e946e06ae79c7f630500b083 178 SMART SM00739 126 153 2.3E-7 T 22-04-2016 IPR005824 KOW SII_RS00645 9c42bef2e946e06ae79c7f630500b083 178 PANTHER PTHR30265 1 178 1.0E-64 T 22-04-2016 SII_RS00645 9c42bef2e946e06ae79c7f630500b083 178 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 8 176 6.3E-49 T 22-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 SII_RS00645 9c42bef2e946e06ae79c7f630500b083 178 Gene3D G3DSA:3.30.70.940 6 118 4.7E-43 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 SII_RS00645 9c42bef2e946e06ae79c7f630500b083 178 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 5 178 22.037 T 22-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 SII_RS00645 9c42bef2e946e06ae79c7f630500b083 178 SUPERFAMILY SSF82679 6 117 5.49E-36 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 SII_RS00645 9c42bef2e946e06ae79c7f630500b083 178 Pfam PF02357 Transcription termination factor nusG 6 113 1.6E-27 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 SII_RS00645 9c42bef2e946e06ae79c7f630500b083 178 SMART SM00738 5 116 9.4E-50 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 SII_RS05620 f8baf28cb7d51fe0e3bbe2e6991ca5a8 247 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 21 35 1.7E-6 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 SII_RS05620 f8baf28cb7d51fe0e3bbe2e6991ca5a8 247 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 35 53 1.7E-6 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 SII_RS05620 f8baf28cb7d51fe0e3bbe2e6991ca5a8 247 ProSitePatterns PS00894 DeoR-type HTH domain signature. 3 37 - T 22-04-2016 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 SII_RS05620 f8baf28cb7d51fe0e3bbe2e6991ca5a8 247 Pfam PF08220 DeoR-like helix-turn-helix domain 3 57 5.2E-15 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 SII_RS05620 f8baf28cb7d51fe0e3bbe2e6991ca5a8 247 Gene3D G3DSA:3.40.50.1360 70 210 9.1E-18 T 22-04-2016 SII_RS05620 f8baf28cb7d51fe0e3bbe2e6991ca5a8 247 SUPERFAMILY SSF46785 2 56 1.15E-11 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SII_RS05620 f8baf28cb7d51fe0e3bbe2e6991ca5a8 247 Pfam PF00455 DeoR C terminal sensor domain 68 227 8.5E-46 T 22-04-2016 IPR014036 DeoR C-terminal sensor domain SII_RS05620 f8baf28cb7d51fe0e3bbe2e6991ca5a8 247 SUPERFAMILY SSF100950 68 229 3.14E-31 T 22-04-2016 SII_RS05620 f8baf28cb7d51fe0e3bbe2e6991ca5a8 247 PANTHER PTHR30363:SF16 1 247 1.3E-122 T 22-04-2016 SII_RS05620 f8baf28cb7d51fe0e3bbe2e6991ca5a8 247 PANTHER PTHR30363 1 247 1.3E-122 T 22-04-2016 SII_RS05620 f8baf28cb7d51fe0e3bbe2e6991ca5a8 247 Gene3D G3DSA:1.10.10.10 1 52 1.3E-8 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SII_RS05620 f8baf28cb7d51fe0e3bbe2e6991ca5a8 247 SMART SM00420 3 55 6.0E-14 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 SII_RS05620 f8baf28cb7d51fe0e3bbe2e6991ca5a8 247 SMART SM01134 66 228 5.5E-54 T 22-04-2016 SII_RS08450 a799f00d728051562d985449063f2a6c 176 Pfam PF06081 Aromatic acid exporter family member 1 15 160 1.9E-13 T 22-04-2016 IPR010343 Aromatic acid exporter family member 1 SII_RS09520 fda475a4f283f7f5b25e24bb50f1960c 249 PANTHER PTHR26402 1 162 1.9E-23 T 22-04-2016 SII_RS09520 fda475a4f283f7f5b25e24bb50f1960c 249 SUPERFAMILY SSF52172 1 126 1.14E-9 T 22-04-2016 IPR011006 CheY-like superfamily SII_RS09520 fda475a4f283f7f5b25e24bb50f1960c 249 SMART SM00448 1 121 1.1E-9 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SII_RS09520 fda475a4f283f7f5b25e24bb50f1960c 249 SMART SM00850 148 245 2.5E-15 T 22-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 SII_RS09520 fda475a4f283f7f5b25e24bb50f1960c 249 Pfam PF04397 LytTr DNA-binding domain 151 244 2.6E-19 T 22-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 SII_RS09520 fda475a4f283f7f5b25e24bb50f1960c 249 Pfam PF00072 Response regulator receiver domain 3 121 1.6E-9 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SII_RS09520 fda475a4f283f7f5b25e24bb50f1960c 249 Gene3D G3DSA:3.40.50.2300 1 129 2.0E-12 T 22-04-2016 SII_RS09520 fda475a4f283f7f5b25e24bb50f1960c 249 PANTHER PTHR26402:SF577 1 162 1.9E-23 T 22-04-2016 SII_RS09520 fda475a4f283f7f5b25e24bb50f1960c 249 Gene3D G3DSA:2.40.50.40 142 209 2.8E-10 T 22-04-2016 SII_RS08285 3004a7eafacfa9f303829b03ed25afee 249 Gene3D G3DSA:3.40.1180.10 15 248 3.1E-96 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 SII_RS08285 3004a7eafacfa9f303829b03ed25afee 249 PANTHER PTHR10291 16 249 5.3E-118 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 SII_RS08285 3004a7eafacfa9f303829b03ed25afee 249 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 16 248 40.917 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 SII_RS08285 3004a7eafacfa9f303829b03ed25afee 249 SUPERFAMILY SSF64005 16 242 1.96E-87 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 SII_RS08285 3004a7eafacfa9f303829b03ed25afee 249 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 16 247 4.5E-88 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 SII_RS08285 3004a7eafacfa9f303829b03ed25afee 249 Pfam PF01255 Putative undecaprenyl diphosphate synthase 23 247 1.1E-80 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 SII_RS08285 3004a7eafacfa9f303829b03ed25afee 249 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 193 210 - T 22-04-2016 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 SII_RS05205 bcabb4a03077a57bb6053be3cba9e361 158 Pfam PF01202 Shikimate kinase 9 155 5.2E-41 T 22-04-2016 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 SII_RS05205 bcabb4a03077a57bb6053be3cba9e361 158 PRINTS PR01100 Shikimate kinase family signature 68 77 9.3E-20 T 22-04-2016 SII_RS05205 bcabb4a03077a57bb6053be3cba9e361 158 PRINTS PR01100 Shikimate kinase family signature 51 59 9.3E-20 T 22-04-2016 SII_RS05205 bcabb4a03077a57bb6053be3cba9e361 158 PRINTS PR01100 Shikimate kinase family signature 89 106 9.3E-20 T 22-04-2016 SII_RS05205 bcabb4a03077a57bb6053be3cba9e361 158 PRINTS PR01100 Shikimate kinase family signature 23 36 9.3E-20 T 22-04-2016 SII_RS05205 bcabb4a03077a57bb6053be3cba9e361 158 PRINTS PR01100 Shikimate kinase family signature 3 18 9.3E-20 T 22-04-2016 SII_RS05205 bcabb4a03077a57bb6053be3cba9e361 158 Gene3D G3DSA:3.40.50.300 4 156 6.3E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS05205 bcabb4a03077a57bb6053be3cba9e361 158 SUPERFAMILY SSF52540 4 157 9.14E-25 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS05205 bcabb4a03077a57bb6053be3cba9e361 158 PANTHER PTHR21087 4 155 4.1E-43 T 22-04-2016 SII_RS05205 bcabb4a03077a57bb6053be3cba9e361 158 ProSitePatterns PS01128 Shikimate kinase signature. 52 76 - T 22-04-2016 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 SII_RS05205 bcabb4a03077a57bb6053be3cba9e361 158 Hamap MF_00109 Shikimate kinase [aroK]. 1 158 22.558 T 22-04-2016 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 SII_RS05205 bcabb4a03077a57bb6053be3cba9e361 158 PANTHER PTHR21087:SF0 4 155 4.1E-43 T 22-04-2016 SII_RS05380 512102eb20141f37fea533e938096bc6 602 PANTHER PTHR30562:SF1 2 588 1.5E-269 T 22-04-2016 SII_RS05380 512102eb20141f37fea533e938096bc6 602 SUPERFAMILY SSF46600 182 235 2.09E-12 T 22-04-2016 IPR001943 UVR domain GO:0005515 SII_RS05380 512102eb20141f37fea533e938096bc6 602 Pfam PF01541 GIY-YIG catalytic domain 17 90 3.4E-11 T 22-04-2016 IPR000305 GIY-YIG nuclease superfamily SII_RS05380 512102eb20141f37fea533e938096bc6 602 Gene3D G3DSA:1.10.150.20 537 588 1.7E-21 T 22-04-2016 SII_RS05380 512102eb20141f37fea533e938096bc6 602 Pfam PF14520 Helix-hairpin-helix domain 538 585 7.0E-6 T 22-04-2016 SII_RS05380 512102eb20141f37fea533e938096bc6 602 Gene3D G3DSA:4.10.860.10 181 235 7.1E-15 T 22-04-2016 IPR001943 UVR domain GO:0005515 SII_RS05380 512102eb20141f37fea533e938096bc6 602 Hamap MF_00203 UvrABC system protein C [uvrC]. 2 587 27.641 T 22-04-2016 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 SII_RS05380 512102eb20141f37fea533e938096bc6 602 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 374 523 6.2E-49 T 22-04-2016 IPR001162 UvrC family homology region SII_RS05380 512102eb20141f37fea533e938096bc6 602 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 6 570 2.6E-198 T 22-04-2016 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 SII_RS05380 512102eb20141f37fea533e938096bc6 602 SMART SM00465 15 95 3.1E-23 T 22-04-2016 IPR000305 GIY-YIG nuclease superfamily SII_RS05380 512102eb20141f37fea533e938096bc6 602 SUPERFAMILY SSF82771 16 97 5.89E-22 T 22-04-2016 IPR000305 GIY-YIG nuclease superfamily SII_RS05380 512102eb20141f37fea533e938096bc6 602 Pfam PF02151 UvrB/uvrC motif 197 227 1.1E-7 T 22-04-2016 IPR001943 UVR domain GO:0005515 SII_RS05380 512102eb20141f37fea533e938096bc6 602 Gene3D G3DSA:3.40.1440.10 16 93 1.4E-9 T 22-04-2016 IPR027299 GIY-YIG domain SII_RS05380 512102eb20141f37fea533e938096bc6 602 SUPERFAMILY SSF47781 503 591 1.87E-21 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 SII_RS05380 512102eb20141f37fea533e938096bc6 602 PANTHER PTHR30562 2 588 1.5E-269 T 22-04-2016 SII_RS05020 cb2e701c351c7fa22dcd35508e875fc1 995 Pfam PF14028 Lantibiotic biosynthesis dehydratase C-term 739 987 2.4E-18 T 22-04-2016 IPR023809 Thiopeptide-type bacteriocin biosynthesis domain SII_RS05020 cb2e701c351c7fa22dcd35508e875fc1 995 TIGRFAM TIGR03891 thiopep_ocin: thiopeptide-type bacteriocin biosynthesis domain 739 986 1.1E-33 T 22-04-2016 IPR023809 Thiopeptide-type bacteriocin biosynthesis domain SII_RS05020 cb2e701c351c7fa22dcd35508e875fc1 995 Pfam PF04738 Lantibiotic dehydratase, C terminus 41 666 5.7E-92 T 22-04-2016 IPR006827 Lantibiotic dehydratase, C-terminal SII_RS08090 4767b1211686e2c6290df218afe65b07 631 Pfam PF05649 Peptidase family M13 5 384 1.9E-58 T 22-04-2016 IPR008753 Peptidase M13, N-terminal domain GO:0006508 SII_RS08090 4767b1211686e2c6290df218afe65b07 631 Gene3D G3DSA:3.40.390.10 429 631 4.0E-89 T 22-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 SII_RS08090 4767b1211686e2c6290df218afe65b07 631 Gene3D G3DSA:3.40.390.10 282 387 4.0E-89 T 22-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 SII_RS08090 4767b1211686e2c6290df218afe65b07 631 PANTHER PTHR11733 6 631 2.8E-133 T 22-04-2016 IPR000718 Peptidase M13 GO:0004222|GO:0006508 SII_RS08090 4767b1211686e2c6290df218afe65b07 631 PANTHER PTHR11733:SF65 6 631 2.8E-133 T 22-04-2016 SII_RS08090 4767b1211686e2c6290df218afe65b07 631 SUPERFAMILY SSF55486 5 631 5.86E-185 T 22-04-2016 SII_RS08090 4767b1211686e2c6290df218afe65b07 631 Pfam PF01431 Peptidase family M13 438 628 3.6E-63 T 22-04-2016 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 SII_RS08090 4767b1211686e2c6290df218afe65b07 631 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 469 485 5.4E-22 T 22-04-2016 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 SII_RS08090 4767b1211686e2c6290df218afe65b07 631 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 430 442 5.4E-22 T 22-04-2016 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 SII_RS08090 4767b1211686e2c6290df218afe65b07 631 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 539 550 5.4E-22 T 22-04-2016 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 SII_RS08090 4767b1211686e2c6290df218afe65b07 631 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 448 460 5.4E-22 T 22-04-2016 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 SII_RS05220 d8e5283f29d43298e1d3ebb0c77e9027 368 SUPERFAMILY SSF51735 6 173 2.27E-41 T 22-04-2016 IPR016040 NAD(P)-binding domain SII_RS05220 d8e5283f29d43298e1d3ebb0c77e9027 368 PANTHER PTHR21363 6 359 1.9E-71 T 22-04-2016 SII_RS05220 d8e5283f29d43298e1d3ebb0c77e9027 368 PANTHER PTHR21363:SF0 6 359 1.9E-71 T 22-04-2016 SII_RS05220 d8e5283f29d43298e1d3ebb0c77e9027 368 Pfam PF02153 Prephenate dehydrogenase 18 277 2.0E-71 T 22-04-2016 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 SII_RS05220 d8e5283f29d43298e1d3ebb0c77e9027 368 Gene3D G3DSA:3.40.50.720 1 182 3.2E-35 T 22-04-2016 IPR016040 NAD(P)-binding domain SII_RS05220 d8e5283f29d43298e1d3ebb0c77e9027 368 SUPERFAMILY SSF48179 177 286 2.49E-32 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 SII_RS05355 5a9e2ff5c25274ae7ba4c34200043545 150 Pfam PF01047 MarR family 38 92 1.3E-9 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SII_RS05355 5a9e2ff5c25274ae7ba4c34200043545 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 69 84 1.9E-7 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SII_RS05355 5a9e2ff5c25274ae7ba4c34200043545 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 118 138 1.9E-7 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SII_RS05355 5a9e2ff5c25274ae7ba4c34200043545 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 88 104 1.9E-7 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SII_RS05355 5a9e2ff5c25274ae7ba4c34200043545 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 52 68 1.9E-7 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SII_RS05355 5a9e2ff5c25274ae7ba4c34200043545 150 PANTHER PTHR18964:SF129 34 149 4.5E-20 T 22-04-2016 SII_RS05355 5a9e2ff5c25274ae7ba4c34200043545 150 Gene3D G3DSA:1.10.10.10 9 142 2.8E-30 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SII_RS05355 5a9e2ff5c25274ae7ba4c34200043545 150 SMART SM00347 25 128 7.9E-15 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SII_RS05355 5a9e2ff5c25274ae7ba4c34200043545 150 PANTHER PTHR18964 34 149 4.5E-20 T 22-04-2016 SII_RS05355 5a9e2ff5c25274ae7ba4c34200043545 150 SUPERFAMILY SSF46785 8 143 5.29E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SII_RS00520 f83fd93dc394ae87b06f3a795e0c2216 159 Pfam PF00137 ATP synthase subunit C 19 78 6.6E-13 T 22-04-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 SII_RS00520 f83fd93dc394ae87b06f3a795e0c2216 159 Pfam PF00137 ATP synthase subunit C 96 154 2.1E-13 T 22-04-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 SII_RS00520 f83fd93dc394ae87b06f3a795e0c2216 159 PANTHER PTHR10263:SF5 15 128 1.3E-13 T 22-04-2016 SII_RS00520 f83fd93dc394ae87b06f3a795e0c2216 159 Gene3D G3DSA:1.20.120.610 10 155 2.1E-33 T 22-04-2016 SII_RS00520 f83fd93dc394ae87b06f3a795e0c2216 159 SUPERFAMILY SSF81333 86 156 5.23E-10 T 22-04-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 SII_RS00520 f83fd93dc394ae87b06f3a795e0c2216 159 PRINTS PR00122 Vacuolar ATP synthase 16kDa subunit signature 58 82 3.8E-5 T 22-04-2016 IPR000245 V-ATPase proteolipid subunit GO:0015078|GO:0015991|GO:0033179 SII_RS00520 f83fd93dc394ae87b06f3a795e0c2216 159 PRINTS PR00122 Vacuolar ATP synthase 16kDa subunit signature 133 156 3.8E-5 T 22-04-2016 IPR000245 V-ATPase proteolipid subunit GO:0015078|GO:0015991|GO:0033179 SII_RS00520 f83fd93dc394ae87b06f3a795e0c2216 159 PRINTS PR00122 Vacuolar ATP synthase 16kDa subunit signature 32 56 3.8E-5 T 22-04-2016 IPR000245 V-ATPase proteolipid subunit GO:0015078|GO:0015991|GO:0033179 SII_RS00520 f83fd93dc394ae87b06f3a795e0c2216 159 SUPERFAMILY SSF81333 15 81 4.45E-10 T 22-04-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 SII_RS00520 f83fd93dc394ae87b06f3a795e0c2216 159 PANTHER PTHR10263 15 128 1.3E-13 T 22-04-2016 SII_RS06305 a5bac578e042a167a38619fadf54af12 236 PANTHER PTHR24220:SF568 5 235 2.0E-136 T 22-04-2016 SII_RS06305 a5bac578e042a167a38619fadf54af12 236 PIRSF PIRSF039137 1 236 4.4E-110 T 22-04-2016 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein GO:0015658|GO:0015803 SII_RS06305 a5bac578e042a167a38619fadf54af12 236 SMART SM00382 28 215 4.8E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain SII_RS06305 a5bac578e042a167a38619fadf54af12 236 Pfam PF00005 ABC transporter 20 164 8.6E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SII_RS06305 a5bac578e042a167a38619fadf54af12 236 Gene3D G3DSA:3.40.50.300 2 231 2.4E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS06305 a5bac578e042a167a38619fadf54af12 236 PANTHER PTHR24220 5 235 2.0E-136 T 22-04-2016 SII_RS06305 a5bac578e042a167a38619fadf54af12 236 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SII_RS06305 a5bac578e042a167a38619fadf54af12 236 SUPERFAMILY SSF52540 3 234 6.3E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS01825 26b8a0003aebfca556daa779071002e5 416 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 283 384 2.9E-10 T 22-04-2016 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 Reactome: REACT_13 SII_RS01825 26b8a0003aebfca556daa779071002e5 416 SUPERFAMILY SSF51419 19 280 2.29E-55 T 22-04-2016 IPR029066 PLP-binding barrel SII_RS01825 26b8a0003aebfca556daa779071002e5 416 PANTHER PTHR11482 5 416 1.7E-121 T 22-04-2016 SII_RS01825 26b8a0003aebfca556daa779071002e5 416 Gene3D G3DSA:3.20.20.10 28 265 2.8E-59 T 22-04-2016 IPR029066 PLP-binding barrel SII_RS01825 26b8a0003aebfca556daa779071002e5 416 PRINTS PR01181 Diaminopimelate decarboxylase signature 69 86 8.1E-10 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 SII_RS01825 26b8a0003aebfca556daa779071002e5 416 PRINTS PR01181 Diaminopimelate decarboxylase signature 295 313 8.1E-10 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 SII_RS01825 26b8a0003aebfca556daa779071002e5 416 PRINTS PR01181 Diaminopimelate decarboxylase signature 154 163 8.1E-10 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 SII_RS01825 26b8a0003aebfca556daa779071002e5 416 PRINTS PR01181 Diaminopimelate decarboxylase signature 376 398 8.1E-10 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 SII_RS01825 26b8a0003aebfca556daa779071002e5 416 PANTHER PTHR11482:SF5 5 416 1.7E-121 T 22-04-2016 SII_RS01825 26b8a0003aebfca556daa779071002e5 416 Gene3D G3DSA:2.40.37.10 266 409 1.7E-40 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 SII_RS01825 26b8a0003aebfca556daa779071002e5 416 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 30 278 5.5E-27 T 22-04-2016 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 Reactome: REACT_13 SII_RS01825 26b8a0003aebfca556daa779071002e5 416 SUPERFAMILY SSF50621 254 407 8.16E-42 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 SII_RS01825 26b8a0003aebfca556daa779071002e5 416 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 71 83 6.0E-13 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 SII_RS01825 26b8a0003aebfca556daa779071002e5 416 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 268 287 6.0E-13 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 SII_RS01825 26b8a0003aebfca556daa779071002e5 416 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 51 69 6.0E-13 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 SII_RS01825 26b8a0003aebfca556daa779071002e5 416 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 366 379 6.0E-13 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 SII_RS05975 69d3b7d4c9173be138f3d8335c6fb73f 345 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 16 340 5.6E-73 T 22-04-2016 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 SII_RS05975 69d3b7d4c9173be138f3d8335c6fb73f 345 Gene3D G3DSA:1.10.8.60 147 232 3.6E-6 T 22-04-2016 SII_RS05975 69d3b7d4c9173be138f3d8335c6fb73f 345 PANTHER PTHR34388 1 340 1.7E-52 T 22-04-2016 SII_RS05975 69d3b7d4c9173be138f3d8335c6fb73f 345 Pfam PF06144 DNA polymerase III, delta subunit 20 191 8.4E-45 T 22-04-2016 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 SII_RS05975 69d3b7d4c9173be138f3d8335c6fb73f 345 SUPERFAMILY SSF48019 216 340 7.37E-18 T 22-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 SII_RS05975 69d3b7d4c9173be138f3d8335c6fb73f 345 SUPERFAMILY SSF52540 55 210 6.44E-8 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS01040 741f128b99fbd4fb205ce2ded87d67f5 336 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 6 313 1.3E-128 T 22-04-2016 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 SII_RS01040 741f128b99fbd4fb205ce2ded87d67f5 336 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 79 99 3.8E-48 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 SII_RS01040 741f128b99fbd4fb205ce2ded87d67f5 336 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 100 119 3.8E-48 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 SII_RS01040 741f128b99fbd4fb205ce2ded87d67f5 336 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 7 20 3.8E-48 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 SII_RS01040 741f128b99fbd4fb205ce2ded87d67f5 336 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 156 177 3.8E-48 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 SII_RS01040 741f128b99fbd4fb205ce2ded87d67f5 336 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 133 145 3.8E-48 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 SII_RS01040 741f128b99fbd4fb205ce2ded87d67f5 336 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 266 275 3.8E-48 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 SII_RS01040 741f128b99fbd4fb205ce2ded87d67f5 336 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 4 332 58.423 T 22-04-2016 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 SII_RS01040 741f128b99fbd4fb205ce2ded87d67f5 336 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 7 307 5.4E-105 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 SII_RS01040 741f128b99fbd4fb205ce2ded87d67f5 336 PANTHER PTHR11735 1 336 6.0E-146 T 22-04-2016 SII_RS01040 741f128b99fbd4fb205ce2ded87d67f5 336 PANTHER PTHR11735:SF6 1 336 6.0E-146 T 22-04-2016 SII_RS01040 741f128b99fbd4fb205ce2ded87d67f5 336 SUPERFAMILY SSF53067 5 124 7.77E-31 T 22-04-2016 SII_RS01040 741f128b99fbd4fb205ce2ded87d67f5 336 Pfam PF00814 Glycoprotease family 26 308 4.3E-103 T 22-04-2016 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 SII_RS01040 741f128b99fbd4fb205ce2ded87d67f5 336 ProSitePatterns PS01016 Glycoprotease family signature. 99 119 - T 22-04-2016 IPR017860 Peptidase M22, conserved site KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 SII_RS01040 741f128b99fbd4fb205ce2ded87d67f5 336 Gene3D G3DSA:3.30.420.40 5 161 1.8E-48 T 22-04-2016 SII_RS01040 741f128b99fbd4fb205ce2ded87d67f5 336 SUPERFAMILY SSF53067 104 309 4.34E-41 T 22-04-2016 SII_RS06165 01326695c611cd36bed21fb244e0c13d 151 SMART SM00850 53 150 9.6E-19 T 22-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 SII_RS06165 01326695c611cd36bed21fb244e0c13d 151 Gene3D G3DSA:2.40.50.40 44 113 5.4E-13 T 22-04-2016 SII_RS06165 01326695c611cd36bed21fb244e0c13d 151 PANTHER PTHR37299 18 151 4.8E-12 T 22-04-2016 SII_RS06165 01326695c611cd36bed21fb244e0c13d 151 Pfam PF04397 LytTr DNA-binding domain 53 149 1.6E-17 T 22-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 SII_RS02940 aa088d33f32242d98fcdba4b0163d362 553 PANTHER PTHR11203 1 553 3.0E-302 T 22-04-2016 SII_RS02940 aa088d33f32242d98fcdba4b0163d362 553 SUPERFAMILY SSF56281 4 419 2.49E-70 T 22-04-2016 IPR001279 Metallo-beta-lactamase SII_RS02940 aa088d33f32242d98fcdba4b0163d362 553 SMART SM00849 16 216 7.3E-21 T 22-04-2016 IPR001279 Metallo-beta-lactamase SII_RS02940 aa088d33f32242d98fcdba4b0163d362 553 TIGRFAM TIGR00649 MG423: beta-CASP ribonuclease, RNase J family 4 550 4.7E-150 T 22-04-2016 IPR004613 Ribonuclease J GO:0003723|GO:0046872 SII_RS02940 aa088d33f32242d98fcdba4b0163d362 553 Hamap MF_01491 Ribonuclease J [rnj]. 1 552 38.778 T 22-04-2016 IPR030854 Ribonuclease J, bacteria GO:0004521|GO:0004534|GO:0006396|GO:0008270|GO:0090501 SII_RS02940 aa088d33f32242d98fcdba4b0163d362 553 Pfam PF00753 Metallo-beta-lactamase superfamily 18 163 2.5E-12 T 22-04-2016 IPR001279 Metallo-beta-lactamase SII_RS02940 aa088d33f32242d98fcdba4b0163d362 553 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 357 413 5.3E-8 T 22-04-2016 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain SII_RS02940 aa088d33f32242d98fcdba4b0163d362 553 PANTHER PTHR11203:SF38 1 553 3.0E-302 T 22-04-2016 SII_RS02940 aa088d33f32242d98fcdba4b0163d362 553 Gene3D G3DSA:3.60.15.10 2 253 1.8E-69 T 22-04-2016 IPR001279 Metallo-beta-lactamase SII_RS01910 b1c82e48353189b7800be9b8b5f8d606 311 TIGRFAM TIGR01212 TIGR01212: radical SAM protein, TIGR01212 family 4 303 1.1E-105 T 22-04-2016 IPR005911 Protein YhcC-like GO:0051536 SII_RS01910 b1c82e48353189b7800be9b8b5f8d606 311 PANTHER PTHR11135:SF1 2 301 6.1E-148 T 22-04-2016 IPR005911 Protein YhcC-like GO:0051536 SII_RS01910 b1c82e48353189b7800be9b8b5f8d606 311 Pfam PF16199 Radical_SAM C-terminal domain 211 294 4.1E-26 T 22-04-2016 IPR032432 Radical SAM, C-terminal extension SII_RS01910 b1c82e48353189b7800be9b8b5f8d606 311 Gene3D G3DSA:3.80.30.20 20 250 4.0E-27 T 22-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe SII_RS01910 b1c82e48353189b7800be9b8b5f8d606 311 SMART SM00729 20 250 8.3E-29 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 SII_RS01910 b1c82e48353189b7800be9b8b5f8d606 311 Pfam PF04055 Radical SAM superfamily 40 203 3.3E-13 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 SII_RS01910 b1c82e48353189b7800be9b8b5f8d606 311 PANTHER PTHR11135 2 301 6.1E-148 T 22-04-2016 SII_RS01910 b1c82e48353189b7800be9b8b5f8d606 311 SUPERFAMILY SSF102114 8 298 1.29E-45 T 22-04-2016 SII_RS00770 2e1dc676545a62936ababcd0dfda5f55 119 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 8 105 2.0E-35 T 22-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 SII_RS00770 2e1dc676545a62936ababcd0dfda5f55 119 Pfam PF00825 Ribonuclease P 1 105 1.3E-31 T 22-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 SII_RS00770 2e1dc676545a62936ababcd0dfda5f55 119 SUPERFAMILY SSF54211 1 111 1.06E-32 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SII_RS00770 2e1dc676545a62936ababcd0dfda5f55 119 ProSitePatterns PS00648 Bacterial ribonuclease P protein component signature. 50 64 - T 22-04-2016 IPR020539 Ribonuclease P, conserved site GO:0004526 SII_RS00770 2e1dc676545a62936ababcd0dfda5f55 119 PANTHER PTHR33992 1 117 6.2E-33 T 22-04-2016 SII_RS00770 2e1dc676545a62936ababcd0dfda5f55 119 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 1 109 19.06 T 22-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 SII_RS00770 2e1dc676545a62936ababcd0dfda5f55 119 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 2 109 1.4E-31 T 22-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 SII_RS00770 2e1dc676545a62936ababcd0dfda5f55 119 Gene3D G3DSA:3.30.230.10 1 110 1.6E-36 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SII_RS07780 db28767c3f6783bb147abec9cd9072e8 1063 Gene3D G3DSA:2.60.220.10 926 1006 4.0E-36 T 22-04-2016 IPR004103 Polysaccharide lyase family 8, C-terminal GO:0005576|GO:0016829 SII_RS07780 db28767c3f6783bb147abec9cd9072e8 1063 PANTHER PTHR38481:SF1 208 1062 1.7E-199 T 22-04-2016 SII_RS07780 db28767c3f6783bb147abec9cd9072e8 1063 PANTHER PTHR38481 208 1062 1.7E-199 T 22-04-2016 SII_RS07780 db28767c3f6783bb147abec9cd9072e8 1063 Pfam PF08124 Polysaccharide lyase family 8, N terminal alpha-helical domain 302 624 1.3E-125 T 22-04-2016 IPR012970 Polysaccharide lyase 8, N-terminal alpha-helical SII_RS07780 db28767c3f6783bb147abec9cd9072e8 1063 SUPERFAMILY SSF74650 664 934 3.56E-99 T 22-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 SII_RS07780 db28767c3f6783bb147abec9cd9072e8 1063 Pfam PF02278 Polysaccharide lyase family 8, super-sandwich domain 667 922 1.1E-68 T 22-04-2016 IPR003159 Polysaccharide lyase family 8, central domain GO:0005576|GO:0016829 SII_RS07780 db28767c3f6783bb147abec9cd9072e8 1063 SUPERFAMILY SSF49785 57 209 2.19E-20 T 22-04-2016 IPR008979 Galactose-binding domain-like SII_RS07780 db28767c3f6783bb147abec9cd9072e8 1063 TIGRFAM TIGR01167 LPXTG_anchor: LPXTG cell wall anchor domain 1034 1061 9.8E-4 T 22-04-2016 IPR019931 LPXTG cell wall anchor domain SII_RS07780 db28767c3f6783bb147abec9cd9072e8 1063 Gene3D G3DSA:2.70.98.10 667 924 2.1E-91 T 22-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 SII_RS07780 db28767c3f6783bb147abec9cd9072e8 1063 SUPERFAMILY SSF81296 216 290 9.1E-27 T 22-04-2016 IPR014756 Immunoglobulin E-set SII_RS07780 db28767c3f6783bb147abec9cd9072e8 1063 SUPERFAMILY SSF49863 937 1012 5.65E-30 T 22-04-2016 IPR011071 Polysaccharide lyase family 8-like, C-terminal GO:0005975 SII_RS07780 db28767c3f6783bb147abec9cd9072e8 1063 Gene3D G3DSA:2.60.120.260 57 209 2.3E-20 T 22-04-2016 IPR008979 Galactose-binding domain-like SII_RS07780 db28767c3f6783bb147abec9cd9072e8 1063 SUPERFAMILY SSF48230 293 660 5.65E-130 T 22-04-2016 IPR008929 Chondroitin AC/alginate lyase SII_RS07780 db28767c3f6783bb147abec9cd9072e8 1063 Gene3D G3DSA:2.60.40.1380 217 290 4.2E-30 T 22-04-2016 IPR023295 Hyaluronate lyase, beta-sheet domain MetaCyc: PWY-7645 SII_RS07780 db28767c3f6783bb147abec9cd9072e8 1063 Pfam PF00746 Gram positive anchor 1029 1061 2.0E-4 T 22-04-2016 IPR019948 Gram-positive anchor SII_RS07780 db28767c3f6783bb147abec9cd9072e8 1063 Gene3D G3DSA:1.50.10.100 291 658 8.3E-131 T 22-04-2016 IPR012329 Polysaccharide lyase family 8, N-terminal GO:0005975|GO:0016837 SII_RS07780 db28767c3f6783bb147abec9cd9072e8 1063 Pfam PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain 938 1001 2.1E-12 T 22-04-2016 IPR004103 Polysaccharide lyase family 8, C-terminal GO:0005576|GO:0016829 SII_RS08970 8275fd62f2b2255c1c31b454d5f985fc 139 PANTHER PTHR33317:SF1 1 136 1.4E-43 T 22-04-2016 SII_RS08970 8275fd62f2b2255c1c31b454d5f985fc 139 SUPERFAMILY SSF53098 1 137 1.32E-42 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SII_RS08970 8275fd62f2b2255c1c31b454d5f985fc 139 Pfam PF03652 Holliday junction resolvase 1 136 1.1E-43 T 22-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 SII_RS08970 8275fd62f2b2255c1c31b454d5f985fc 139 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 4 136 6.7E-44 T 22-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 SII_RS08970 8275fd62f2b2255c1c31b454d5f985fc 139 PANTHER PTHR33317 1 136 1.4E-43 T 22-04-2016 SII_RS08970 8275fd62f2b2255c1c31b454d5f985fc 139 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 1 139 26.971 T 22-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 SII_RS08970 8275fd62f2b2255c1c31b454d5f985fc 139 Gene3D G3DSA:3.30.420.140 1 137 6.3E-51 T 22-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 SII_RS08970 8275fd62f2b2255c1c31b454d5f985fc 139 SMART SM00732 1 103 1.4E-41 T 22-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 SII_RS06285 2d48ce670bf89aab2ed0258ec30b92fe 297 Gene3D G3DSA:3.40.50.300 10 164 1.1E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS06285 2d48ce670bf89aab2ed0258ec30b92fe 297 PANTHER PTHR11669 10 163 2.3E-45 T 22-04-2016 SII_RS06285 2d48ce670bf89aab2ed0258ec30b92fe 297 Pfam PF13177 DNA polymerase III, delta subunit 10 165 6.7E-54 T 22-04-2016 SII_RS06285 2d48ce670bf89aab2ed0258ec30b92fe 297 PANTHER PTHR11669:SF8 10 163 2.3E-45 T 22-04-2016 SII_RS06285 2d48ce670bf89aab2ed0258ec30b92fe 297 SUPERFAMILY SSF52540 9 180 6.34E-35 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS01985 06424f4fea1d75b9722cf8ae36257313 215 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SII_RS01985 06424f4fea1d75b9722cf8ae36257313 215 SUPERFAMILY SSF52540 3 210 5.54E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS01985 06424f4fea1d75b9722cf8ae36257313 215 PANTHER PTHR24220:SF587 5 209 1.2E-95 T 22-04-2016 SII_RS01985 06424f4fea1d75b9722cf8ae36257313 215 PANTHER PTHR24220 5 209 1.2E-95 T 22-04-2016 SII_RS01985 06424f4fea1d75b9722cf8ae36257313 215 Gene3D G3DSA:3.40.50.300 2 210 1.1E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS01985 06424f4fea1d75b9722cf8ae36257313 215 SMART SM00382 30 206 1.9E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain SII_RS01985 06424f4fea1d75b9722cf8ae36257313 215 Pfam PF00005 ABC transporter 21 157 1.3E-33 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SII_RS09330 ea7918ffd81eebcdb37ee224142be082 172 Pfam PF00085 Thioredoxin 65 159 2.9E-7 T 22-04-2016 IPR013766 Thioredoxin domain GO:0045454 SII_RS09330 ea7918ffd81eebcdb37ee224142be082 172 Gene3D G3DSA:3.40.30.10 58 155 1.5E-23 T 22-04-2016 IPR012336 Thioredoxin-like fold SII_RS09330 ea7918ffd81eebcdb37ee224142be082 172 SUPERFAMILY SSF52833 61 151 5.69E-17 T 22-04-2016 IPR012336 Thioredoxin-like fold SII_RS06785 c12b49385487c8cf2aef7cc4d9844200 274 Pfam PF02540 NAD synthase 23 265 8.6E-66 T 22-04-2016 IPR022310 NAD/GMP synthase SII_RS06785 c12b49385487c8cf2aef7cc4d9844200 274 PANTHER PTHR23090 1 274 7.8E-158 T 22-04-2016 SII_RS06785 c12b49385487c8cf2aef7cc4d9844200 274 PANTHER PTHR23090:SF7 1 274 7.8E-158 T 22-04-2016 SII_RS06785 c12b49385487c8cf2aef7cc4d9844200 274 SUPERFAMILY SSF52402 3 273 2.43E-83 T 22-04-2016 SII_RS06785 c12b49385487c8cf2aef7cc4d9844200 274 Hamap MF_00193 NH(3)-dependent NAD(+) synthetase [nadE]. 17 268 29.883 T 22-04-2016 IPR022926 NH(3)-dependent NAD(+) synthetase GO:0008795|GO:0009435 KEGG: 00760+6.3.1.5|UniPathway: UPA00253 SII_RS06785 c12b49385487c8cf2aef7cc4d9844200 274 TIGRFAM TIGR00552 nadE: NAD+ synthetase 17 274 8.8E-71 T 22-04-2016 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|UniPathway: UPA00253 SII_RS06785 c12b49385487c8cf2aef7cc4d9844200 274 Gene3D G3DSA:3.40.50.620 4 269 1.3E-63 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SII_RS04730 0d1756d4ac72cd68c5c20f42238d2b05 173 Pfam PF04191 Phospholipid methyltransferase 88 160 2.7E-14 T 22-04-2016 IPR007318 Phospholipid methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|UniPathway: UPA00753 SII_RS08245 39902ac9ee18c3d0bbd093e943ea4f4e 354 Pfam PF05343 M42 glutamyl aminopeptidase 45 333 3.5E-95 T 22-04-2016 IPR008007 Peptidase M42 SII_RS08245 39902ac9ee18c3d0bbd093e943ea4f4e 354 PIRSF PIRSF001123 1 354 3.2E-134 T 22-04-2016 IPR008007 Peptidase M42 SII_RS08245 39902ac9ee18c3d0bbd093e943ea4f4e 354 TIGRFAM TIGR03107 glu_aminopep: glutamyl aminopeptidase 5 351 4.4E-190 T 22-04-2016 IPR017538 Peptidase M42, glutamyl aminopeptidase MetaCyc: PWY-5706|MetaCyc: PWY-5707|MetaCyc: PWY-7614 SII_RS08245 39902ac9ee18c3d0bbd093e943ea4f4e 354 Gene3D G3DSA:2.40.30.40 76 163 7.0E-28 T 22-04-2016 IPR023367 Peptidase M42, domain 2 SII_RS08245 39902ac9ee18c3d0bbd093e943ea4f4e 354 SUPERFAMILY SSF101821 71 181 8.24E-24 T 22-04-2016 SII_RS08245 39902ac9ee18c3d0bbd093e943ea4f4e 354 SUPERFAMILY SSF53187 4 81 3.03E-60 T 22-04-2016 SII_RS08245 39902ac9ee18c3d0bbd093e943ea4f4e 354 SUPERFAMILY SSF53187 173 349 3.03E-60 T 22-04-2016 SII_RS08245 39902ac9ee18c3d0bbd093e943ea4f4e 354 Gene3D G3DSA:3.40.630.10 170 351 2.9E-76 T 22-04-2016 SII_RS08245 39902ac9ee18c3d0bbd093e943ea4f4e 354 Gene3D G3DSA:3.40.630.10 1 74 2.9E-76 T 22-04-2016 SII_RS08245 39902ac9ee18c3d0bbd093e943ea4f4e 354 PANTHER PTHR32481:SF0 1 354 1.2E-157 T 22-04-2016 SII_RS08245 39902ac9ee18c3d0bbd093e943ea4f4e 354 PANTHER PTHR32481 1 354 1.2E-157 T 22-04-2016 SII_RS04705 a98f7cda119342c17e38d42de7deeec9 96 Gene3D G3DSA:3.40.250.10 11 93 2.4E-17 T 22-04-2016 IPR001763 Rhodanese-like domain SII_RS04705 a98f7cda119342c17e38d42de7deeec9 96 SUPERFAMILY SSF52821 11 94 2.49E-20 T 22-04-2016 IPR001763 Rhodanese-like domain SII_RS04705 a98f7cda119342c17e38d42de7deeec9 96 Pfam PF00581 Rhodanese-like domain 12 92 7.3E-7 T 22-04-2016 IPR001763 Rhodanese-like domain SII_RS04705 a98f7cda119342c17e38d42de7deeec9 96 SMART SM00450 7 96 7.0E-7 T 22-04-2016 IPR001763 Rhodanese-like domain SII_RS05230 8f46ced715af98ee94d3cb6fc10680f5 278 PANTHER PTHR30269 1 277 2.1E-99 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 SII_RS05230 8f46ced715af98ee94d3cb6fc10680f5 278 PANTHER PTHR30269:SF23 1 277 2.1E-99 T 22-04-2016 SII_RS05230 8f46ced715af98ee94d3cb6fc10680f5 278 Pfam PF01925 Sulfite exporter TauE/SafE 9 272 5.3E-50 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 SII_RS03200 e454f9423ef72844e45d80b2849ffd07 625 Gene3D G3DSA:3.40.50.300 382 581 9.8E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS03200 e454f9423ef72844e45d80b2849ffd07 625 Gene3D G3DSA:3.40.50.300 85 205 9.8E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS03200 e454f9423ef72844e45d80b2849ffd07 625 Pfam PF02534 Type IV secretory system Conjugative DNA transfer 135 574 2.3E-66 T 22-04-2016 IPR003688 Type IV secretion system protein TraG/VirD4 GO:0009291|GO:0016020 SII_RS03200 e454f9423ef72844e45d80b2849ffd07 625 SUPERFAMILY SSF52540 132 290 1.36E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS03200 e454f9423ef72844e45d80b2849ffd07 625 SUPERFAMILY SSF52540 341 573 1.36E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS09150 39173ba753f9cb9cd2d23077d4142543 291 Gene3D G3DSA:3.30.200.20 31 127 3.3E-11 T 22-04-2016 SII_RS09150 39173ba753f9cb9cd2d23077d4142543 291 PANTHER PTHR24362:SF160 32 288 1.4E-48 T 22-04-2016 SII_RS09150 39173ba753f9cb9cd2d23077d4142543 291 SUPERFAMILY SSF56112 31 287 1.18E-50 T 22-04-2016 IPR011009 Protein kinase-like domain SII_RS09150 39173ba753f9cb9cd2d23077d4142543 291 SMART SM00220 27 286 5.5E-24 T 22-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 SII_RS09150 39173ba753f9cb9cd2d23077d4142543 291 Pfam PF00069 Protein kinase domain 32 277 1.7E-37 T 22-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 SII_RS09150 39173ba753f9cb9cd2d23077d4142543 291 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 145 157 - T 22-04-2016 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 SII_RS09150 39173ba753f9cb9cd2d23077d4142543 291 Gene3D G3DSA:1.10.510.10 128 287 3.3E-35 T 22-04-2016 SII_RS09150 39173ba753f9cb9cd2d23077d4142543 291 PANTHER PTHR24362 32 288 1.4E-48 T 22-04-2016 SII_RS06660 c80f047f54a39f2be66a90a53aba8c74 177 PANTHER PTHR39159:SF1 1 176 5.9E-71 T 22-04-2016 SII_RS06660 c80f047f54a39f2be66a90a53aba8c74 177 Gene3D G3DSA:2.40.380.10 4 170 4.8E-45 T 22-04-2016 IPR007295 Domain of unknown function DUF402 SII_RS06660 c80f047f54a39f2be66a90a53aba8c74 177 PIRSF PIRSF028345 1 177 2.2E-75 T 22-04-2016 IPR016882 Uncharacterised protein family UPF0374 SII_RS06660 c80f047f54a39f2be66a90a53aba8c74 177 Hamap MF_01568 UPF0374 protein . 1 175 48.814 T 22-04-2016 IPR016882 Uncharacterised protein family UPF0374 SII_RS06660 c80f047f54a39f2be66a90a53aba8c74 177 SUPERFAMILY SSF159234 3 170 1.44E-31 T 22-04-2016 SII_RS06660 c80f047f54a39f2be66a90a53aba8c74 177 PANTHER PTHR39159 1 176 5.9E-71 T 22-04-2016 SII_RS06660 c80f047f54a39f2be66a90a53aba8c74 177 Pfam PF04167 Protein of unknown function (DUF402) 60 124 2.5E-16 T 22-04-2016 IPR007295 Domain of unknown function DUF402 SII_RS04195 8bb0bc5ec2be8d48157eed5af0c29b09 247 Pfam PF04203 Sortase family 97 221 8.1E-25 T 22-04-2016 IPR005754 Sortase family SII_RS04195 8bb0bc5ec2be8d48157eed5af0c29b09 247 SUPERFAMILY SSF63817 30 221 1.11E-45 T 22-04-2016 IPR023365 Sortase domain SII_RS04195 8bb0bc5ec2be8d48157eed5af0c29b09 247 TIGRFAM TIGR01076 sortase_fam: sortase 95 219 6.0E-20 T 22-04-2016 IPR005754 Sortase family SII_RS04195 8bb0bc5ec2be8d48157eed5af0c29b09 247 PANTHER PTHR33393 1 245 9.3E-49 T 22-04-2016 SII_RS04195 8bb0bc5ec2be8d48157eed5af0c29b09 247 Gene3D G3DSA:2.40.260.10 85 222 1.2E-40 T 22-04-2016 IPR023365 Sortase domain SII_RS04195 8bb0bc5ec2be8d48157eed5af0c29b09 247 PANTHER PTHR33393:SF3 1 245 9.3E-49 T 22-04-2016 SII_RS07100 2da53b9096f07fdba36020c827826c76 162 SUPERFAMILY SSF74942 91 162 7.45E-20 T 22-04-2016 IPR028998 Ribosome maturation factor RimP, C-terminal SII_RS07100 2da53b9096f07fdba36020c827826c76 162 Gene3D G3DSA:3.30.300.70 9 87 7.7E-25 T 22-04-2016 IPR028989 Ribosome maturation factor RimP, N-terminal SII_RS07100 2da53b9096f07fdba36020c827826c76 162 Pfam PF02576 Putative ribosome maturation factor RimP 18 158 3.0E-37 T 22-04-2016 IPR003728 Ribosome maturation factor RimP GO:0042274 SII_RS07100 2da53b9096f07fdba36020c827826c76 162 SUPERFAMILY SSF75420 5 90 3.4E-24 T 22-04-2016 IPR028989 Ribosome maturation factor RimP, N-terminal SII_RS07100 2da53b9096f07fdba36020c827826c76 162 Gene3D G3DSA:2.30.30.180 94 160 8.4E-30 T 22-04-2016 IPR028998 Ribosome maturation factor RimP, C-terminal SII_RS07100 2da53b9096f07fdba36020c827826c76 162 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 12 162 21.931 T 22-04-2016 IPR003728 Ribosome maturation factor RimP GO:0042274 SII_RS07100 2da53b9096f07fdba36020c827826c76 162 PANTHER PTHR33867:SF1 6 162 3.5E-44 T 22-04-2016 SII_RS07100 2da53b9096f07fdba36020c827826c76 162 PANTHER PTHR33867 6 162 3.5E-44 T 22-04-2016 SII_RS06695 60f757bf2ac96e26dd01c5a4423ccd20 624 SMART SM00220 12 273 6.2E-65 T 22-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 SII_RS06695 60f757bf2ac96e26dd01c5a4423ccd20 624 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 132 144 - T 22-04-2016 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 SII_RS06695 60f757bf2ac96e26dd01c5a4423ccd20 624 Gene3D G3DSA:3.30.200.20 6 110 2.3E-30 T 22-04-2016 SII_RS06695 60f757bf2ac96e26dd01c5a4423ccd20 624 SUPERFAMILY SSF56112 8 276 2.7E-79 T 22-04-2016 IPR011009 Protein kinase-like domain SII_RS06695 60f757bf2ac96e26dd01c5a4423ccd20 624 PANTHER PTHR24362 1 340 3.6E-112 T 22-04-2016 SII_RS06695 60f757bf2ac96e26dd01c5a4423ccd20 624 PANTHER PTHR24362 530 622 3.6E-112 T 22-04-2016 SII_RS06695 60f757bf2ac96e26dd01c5a4423ccd20 624 Pfam PF03793 PASTA domain 364 427 3.2E-17 T 22-04-2016 IPR005543 PASTA domain SII_RS06695 60f757bf2ac96e26dd01c5a4423ccd20 624 Pfam PF03793 PASTA domain 505 573 2.2E-7 T 22-04-2016 IPR005543 PASTA domain SII_RS06695 60f757bf2ac96e26dd01c5a4423ccd20 624 Pfam PF03793 PASTA domain 433 500 6.0E-10 T 22-04-2016 IPR005543 PASTA domain SII_RS06695 60f757bf2ac96e26dd01c5a4423ccd20 624 SMART SM00740 428 500 1.1E-12 T 22-04-2016 IPR005543 PASTA domain SII_RS06695 60f757bf2ac96e26dd01c5a4423ccd20 624 SMART SM00740 501 574 1.5 T 22-04-2016 IPR005543 PASTA domain SII_RS06695 60f757bf2ac96e26dd01c5a4423ccd20 624 SMART SM00740 360 427 7.9E-21 T 22-04-2016 IPR005543 PASTA domain SII_RS06695 60f757bf2ac96e26dd01c5a4423ccd20 624 PANTHER PTHR24362:SF160 1 340 3.6E-112 T 22-04-2016 SII_RS06695 60f757bf2ac96e26dd01c5a4423ccd20 624 PANTHER PTHR24362:SF160 530 622 3.6E-112 T 22-04-2016 SII_RS06695 60f757bf2ac96e26dd01c5a4423ccd20 624 Pfam PF00069 Protein kinase domain 12 227 1.4E-52 T 22-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 SII_RS06695 60f757bf2ac96e26dd01c5a4423ccd20 624 Gene3D G3DSA:1.10.510.10 111 330 6.2E-49 T 22-04-2016 SII_RS06695 60f757bf2ac96e26dd01c5a4423ccd20 624 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 18 42 - T 22-04-2016 IPR017441 Protein kinase, ATP binding site GO:0005524 SII_RS04870 643ecb418b5bdf8169ddb2481e5200fa 265 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 6 242 6.0E-70 T 22-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 SII_RS04870 643ecb418b5bdf8169ddb2481e5200fa 265 PANTHER PTHR13799 1 265 1.8E-77 T 22-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 SII_RS04870 643ecb418b5bdf8169ddb2481e5200fa 265 PANTHER PTHR13799:SF13 1 265 1.8E-77 T 22-04-2016 SII_RS04870 643ecb418b5bdf8169ddb2481e5200fa 265 Gene3D G3DSA:3.40.1390.30 114 224 4.3E-41 T 22-04-2016 SII_RS04870 643ecb418b5bdf8169ddb2481e5200fa 265 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 5 255 9.2E-59 T 22-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 SII_RS04870 643ecb418b5bdf8169ddb2481e5200fa 265 SUPERFAMILY SSF102705 1 264 1.83E-81 T 22-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 SII_RS04870 643ecb418b5bdf8169ddb2481e5200fa 265 Gene3D G3DSA:3.40.1390.30 1 113 6.7E-43 T 22-04-2016 SII_RS05825 1cd2afab53c19e614dfd5d5f09b9c53b 477 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 371 379 - T 22-04-2016 IPR018120 Glycoside hydrolase family 1, active site SII_RS05825 1cd2afab53c19e614dfd5d5f09b9c53b 477 PRINTS PR00131 Glycosyl hydrolase family 1 signature 304 318 5.1E-17 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 SII_RS05825 1cd2afab53c19e614dfd5d5f09b9c53b 477 PRINTS PR00131 Glycosyl hydrolase family 1 signature 414 431 5.1E-17 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 SII_RS05825 1cd2afab53c19e614dfd5d5f09b9c53b 477 PRINTS PR00131 Glycosyl hydrolase family 1 signature 371 379 5.1E-17 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 SII_RS05825 1cd2afab53c19e614dfd5d5f09b9c53b 477 PRINTS PR00131 Glycosyl hydrolase family 1 signature 439 451 5.1E-17 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 SII_RS05825 1cd2afab53c19e614dfd5d5f09b9c53b 477 PRINTS PR00131 Glycosyl hydrolase family 1 signature 392 403 5.1E-17 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 SII_RS05825 1cd2afab53c19e614dfd5d5f09b9c53b 477 SUPERFAMILY SSF51445 2 470 1.45E-165 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily SII_RS05825 1cd2afab53c19e614dfd5d5f09b9c53b 477 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 8 22 - T 22-04-2016 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site SII_RS05825 1cd2afab53c19e614dfd5d5f09b9c53b 477 Pfam PF00232 Glycosyl hydrolase family 1 2 474 1.5E-131 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 SII_RS05825 1cd2afab53c19e614dfd5d5f09b9c53b 477 Gene3D G3DSA:3.20.20.80 2 475 1.1E-152 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 SII_RS05825 1cd2afab53c19e614dfd5d5f09b9c53b 477 PANTHER PTHR10353:SF35 4 477 1.4E-239 T 22-04-2016 SII_RS05825 1cd2afab53c19e614dfd5d5f09b9c53b 477 PANTHER PTHR10353 4 477 1.4E-239 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 SII_RS06665 7b2d252173b66c1e506db8c8a1a4e04e 105 Gene3D G3DSA:3.10.450.150 1 104 1.2E-47 T 22-04-2016 SII_RS06665 7b2d252173b66c1e506db8c8a1a4e04e 105 Pfam PF06124 Staphylococcal protein of unknown function (DUF960) 9 101 1.2E-31 T 22-04-2016 IPR009303 Protein of unknown function DUF960 SII_RS08215 19c520cc2882b7b19eec29abf5b2fac7 437 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 348 394 4.8E-5 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SII_RS08215 19c520cc2882b7b19eec29abf5b2fac7 437 Gene3D G3DSA:3.30.565.10 325 426 2.4E-6 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SII_RS08215 19c520cc2882b7b19eec29abf5b2fac7 437 SUPERFAMILY SSF55874 324 429 9.04E-14 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SII_RS08215 19c520cc2882b7b19eec29abf5b2fac7 437 PANTHER PTHR24421:SF15 1 430 3.1E-42 T 22-04-2016 SII_RS08215 19c520cc2882b7b19eec29abf5b2fac7 437 PANTHER PTHR24421 1 430 3.1E-42 T 22-04-2016 SII_RS08215 19c520cc2882b7b19eec29abf5b2fac7 437 Pfam PF07730 Histidine kinase 241 308 2.5E-17 T 22-04-2016 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 SII_RS08215 19c520cc2882b7b19eec29abf5b2fac7 437 SMART SM00387 346 433 8.6E-6 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SII_RS08805 0efe2002582076dc82a04ee91ebab844 380 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 8 375 2.5E-171 T 22-04-2016 IPR004803 Queuine tRNA-ribosyltransferase GO:0008033|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 SII_RS08805 0efe2002582076dc82a04ee91ebab844 380 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 6 365 55.889 T 22-04-2016 IPR004803 Queuine tRNA-ribosyltransferase GO:0008033|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 SII_RS08805 0efe2002582076dc82a04ee91ebab844 380 PANTHER PTHR21148:SF26 1 371 1.6E-174 T 22-04-2016 SII_RS08805 0efe2002582076dc82a04ee91ebab844 380 SUPERFAMILY SSF51713 10 371 1.57E-153 T 22-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 SII_RS08805 0efe2002582076dc82a04ee91ebab844 380 PANTHER PTHR21148 1 371 1.6E-174 T 22-04-2016 SII_RS08805 0efe2002582076dc82a04ee91ebab844 380 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 8 374 3.8E-163 T 22-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 SII_RS08805 0efe2002582076dc82a04ee91ebab844 380 Pfam PF01702 Queuine tRNA-ribosyltransferase 134 367 4.3E-88 T 22-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 SII_RS08805 0efe2002582076dc82a04ee91ebab844 380 Gene3D G3DSA:3.20.20.105 4 373 6.4E-162 T 22-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 SII_RS05530 a6d2d42c88a06858e8f34a76ce7dae34 292 Pfam PF00480 ROK family 5 282 4.4E-41 T 22-04-2016 IPR000600 ROK family SII_RS05530 a6d2d42c88a06858e8f34a76ce7dae34 292 PANTHER PTHR18964 6 284 4.8E-88 T 22-04-2016 SII_RS05530 a6d2d42c88a06858e8f34a76ce7dae34 292 PANTHER PTHR18964:SF121 6 284 4.8E-88 T 22-04-2016 SII_RS05530 a6d2d42c88a06858e8f34a76ce7dae34 292 SUPERFAMILY SSF53067 1 285 2.7E-49 T 22-04-2016 SII_RS05530 a6d2d42c88a06858e8f34a76ce7dae34 292 Gene3D G3DSA:3.30.420.40 99 285 3.4E-57 T 22-04-2016 SII_RS05530 a6d2d42c88a06858e8f34a76ce7dae34 292 Gene3D G3DSA:3.30.420.40 2 98 5.1E-32 T 22-04-2016 SII_RS05630 1f62587a66ac2026ee0bf855cdaabae3 280 SUPERFAMILY SSF56300 1 243 5.01E-53 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like SII_RS05630 1f62587a66ac2026ee0bf855cdaabae3 280 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 4 209 1.0E-21 T 22-04-2016 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type SII_RS05630 1f62587a66ac2026ee0bf855cdaabae3 280 PANTHER PTHR11124 106 276 3.1E-78 T 22-04-2016 IPR000979 Phosphodiesterase MJ0936/Vps29 SII_RS05630 1f62587a66ac2026ee0bf855cdaabae3 280 PANTHER PTHR11124 1 75 3.1E-78 T 22-04-2016 IPR000979 Phosphodiesterase MJ0936/Vps29 SII_RS05630 1f62587a66ac2026ee0bf855cdaabae3 280 PANTHER PTHR11124:SF2 106 276 3.1E-78 T 22-04-2016 SII_RS05630 1f62587a66ac2026ee0bf855cdaabae3 280 PANTHER PTHR11124:SF2 1 75 3.1E-78 T 22-04-2016 SII_RS05630 1f62587a66ac2026ee0bf855cdaabae3 280 Gene3D G3DSA:3.60.21.10 4 250 8.5E-55 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like SII_RS05630 1f62587a66ac2026ee0bf855cdaabae3 280 PIRSF PIRSF000883 3 253 1.1E-73 T 22-04-2016 IPR011152 Phosphoesterase MJ0912 SII_RS02990 8080812f1b342167c6580519fc76499f 450 Gene3D G3DSA:3.40.120.10 3 152 9.3E-45 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SII_RS02990 8080812f1b342167c6580519fc76499f 450 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 3 136 3.3E-40 T 22-04-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SII_RS02990 8080812f1b342167c6580519fc76499f 450 PANTHER PTHR22573:SF15 1 450 1.5E-165 T 22-04-2016 SII_RS02990 8080812f1b342167c6580519fc76499f 450 SUPERFAMILY SSF53738 257 365 3.92E-31 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SII_RS02990 8080812f1b342167c6580519fc76499f 450 Gene3D G3DSA:3.30.310.50 369 445 1.3E-21 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SII_RS02990 8080812f1b342167c6580519fc76499f 450 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 95 104 - T 22-04-2016 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SII_RS02990 8080812f1b342167c6580519fc76499f 450 SUPERFAMILY SSF55957 357 447 6.8E-26 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SII_RS02990 8080812f1b342167c6580519fc76499f 450 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 165 253 4.2E-15 T 22-04-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SII_RS02990 8080812f1b342167c6580519fc76499f 450 PANTHER PTHR22573 1 450 1.5E-165 T 22-04-2016 SII_RS02990 8080812f1b342167c6580519fc76499f 450 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 5 444 1.9E-194 T 22-04-2016 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SII_RS02990 8080812f1b342167c6580519fc76499f 450 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 233 248 5.1E-12 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SII_RS02990 8080812f1b342167c6580519fc76499f 450 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 94 108 5.1E-12 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SII_RS02990 8080812f1b342167c6580519fc76499f 450 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 173 192 5.1E-12 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SII_RS02990 8080812f1b342167c6580519fc76499f 450 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 257 365 8.0E-32 T 22-04-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SII_RS02990 8080812f1b342167c6580519fc76499f 450 Gene3D G3DSA:3.40.120.10 175 249 2.3E-21 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SII_RS02990 8080812f1b342167c6580519fc76499f 450 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 1 446 44.154 T 22-04-2016 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SII_RS02990 8080812f1b342167c6580519fc76499f 450 Gene3D G3DSA:3.40.120.10 250 367 3.0E-38 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SII_RS02990 8080812f1b342167c6580519fc76499f 450 SUPERFAMILY SSF53738 2 166 1.22E-40 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SII_RS02990 8080812f1b342167c6580519fc76499f 450 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 373 443 1.8E-17 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SII_RS02990 8080812f1b342167c6580519fc76499f 450 SUPERFAMILY SSF53738 162 256 1.02E-23 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SII_RS06845 bebbf44c8e0c85e0adadd33cc8b95d01 410 Pfam PF00266 Aminotransferase class-V 26 395 5.7E-152 T 22-04-2016 IPR000192 Aminotransferase class V domain SII_RS06845 bebbf44c8e0c85e0adadd33cc8b95d01 410 TIGRFAM TIGR01979 sufS: cysteine desulfurase, SufS family 8 406 1.5E-182 T 22-04-2016 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 SII_RS06845 bebbf44c8e0c85e0adadd33cc8b95d01 410 PANTHER PTHR11601:SF17 7 407 3.0E-205 T 22-04-2016 SII_RS06845 bebbf44c8e0c85e0adadd33cc8b95d01 410 PIRSF PIRSF005572 23 408 3.5E-54 T 22-04-2016 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 SII_RS06845 bebbf44c8e0c85e0adadd33cc8b95d01 410 PANTHER PTHR11601 7 407 3.0E-205 T 22-04-2016 SII_RS06845 bebbf44c8e0c85e0adadd33cc8b95d01 410 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 216 235 - T 22-04-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site SII_RS06845 bebbf44c8e0c85e0adadd33cc8b95d01 410 Gene3D G3DSA:3.40.640.10 37 282 7.1E-87 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SII_RS06845 bebbf44c8e0c85e0adadd33cc8b95d01 410 Gene3D G3DSA:3.90.1150.10 283 401 3.2E-31 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SII_RS06845 bebbf44c8e0c85e0adadd33cc8b95d01 410 SUPERFAMILY SSF53383 5 402 5.57E-129 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SII_RS03690 f7a32074bbf4a1cb8a0d7cfb7782a44c 158 SUPERFAMILY SSF55811 7 151 1.08E-27 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SII_RS03690 f7a32074bbf4a1cb8a0d7cfb7782a44c 158 ProSitePatterns PS00893 Nudix box signature. 50 71 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 SII_RS03690 f7a32074bbf4a1cb8a0d7cfb7782a44c 158 PANTHER PTHR22769:SF37 13 153 2.1E-27 T 22-04-2016 SII_RS03690 f7a32074bbf4a1cb8a0d7cfb7782a44c 158 Pfam PF00293 NUDIX domain 23 143 3.5E-17 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 SII_RS03690 f7a32074bbf4a1cb8a0d7cfb7782a44c 158 Gene3D G3DSA:3.90.79.10 10 151 7.7E-28 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SII_RS03690 f7a32074bbf4a1cb8a0d7cfb7782a44c 158 PANTHER PTHR22769 13 153 2.1E-27 T 22-04-2016 SII_RS03690 f7a32074bbf4a1cb8a0d7cfb7782a44c 158 PRINTS PR00502 NUDIX hydrolase family signature 45 59 1.0E-5 T 22-04-2016 IPR020476 NUDIX hydrolase SII_RS03690 f7a32074bbf4a1cb8a0d7cfb7782a44c 158 PRINTS PR00502 NUDIX hydrolase family signature 59 74 1.0E-5 T 22-04-2016 IPR020476 NUDIX hydrolase SII_RS00260 b915a5ee825d0e6804c8b152e501bdee 515 SUPERFAMILY SSF52335 2 194 2.52E-70 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain SII_RS00260 b915a5ee825d0e6804c8b152e501bdee 515 PANTHER PTHR11692:SF2 1 515 5.9E-298 T 22-04-2016 SII_RS00260 b915a5ee825d0e6804c8b152e501bdee 515 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 2 515 44.292 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 SII_RS00260 b915a5ee825d0e6804c8b152e501bdee 515 Gene3D G3DSA:3.40.50.1380 2 186 8.9E-85 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain SII_RS00260 b915a5ee825d0e6804c8b152e501bdee 515 PIRSF PIRSF000414 1 515 1.4E-208 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 SII_RS00260 b915a5ee825d0e6804c8b152e501bdee 515 Gene3D G3DSA:3.40.140.20 239 359 3.4E-46 T 22-04-2016 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 SII_RS00260 b915a5ee825d0e6804c8b152e501bdee 515 SMART SM00851 14 129 4.6E-55 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain SII_RS00260 b915a5ee825d0e6804c8b152e501bdee 515 SMART SM00798 134 450 9.0E-186 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 SII_RS00260 b915a5ee825d0e6804c8b152e501bdee 515 PANTHER PTHR11692 1 515 5.9E-298 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 SII_RS00260 b915a5ee825d0e6804c8b152e501bdee 515 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 3 515 1.6E-212 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 SII_RS00260 b915a5ee825d0e6804c8b152e501bdee 515 Pfam PF01808 AICARFT/IMPCHase bienzyme 134 448 6.2E-113 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 SII_RS00260 b915a5ee825d0e6804c8b152e501bdee 515 Pfam PF02142 MGS-like domain 14 128 1.5E-26 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain SII_RS00260 b915a5ee825d0e6804c8b152e501bdee 515 Gene3D G3DSA:3.40.140.20 365 505 6.3E-55 T 22-04-2016 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 SII_RS00260 b915a5ee825d0e6804c8b152e501bdee 515 SUPERFAMILY SSF53927 208 515 1.3E-118 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 SII_RS03610 e15221c07e43d8668ad0e572df6e405c 108 Pfam PF00719 Inorganic pyrophosphatase 22 83 4.6E-6 T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 SII_RS03610 e15221c07e43d8668ad0e572df6e405c 108 SUPERFAMILY SSF50324 4 102 8.5E-15 T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 SII_RS03610 e15221c07e43d8668ad0e572df6e405c 108 Gene3D G3DSA:3.90.80.10 19 101 2.0E-12 T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 SII_RS08510 d1b2fb328c7047645193662584e65cbc 232 SUPERFAMILY SSF51161 84 219 7.99E-49 T 22-04-2016 IPR011004 Trimeric LpxA-like SII_RS08510 d1b2fb328c7047645193662584e65cbc 232 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 170 198 - T 22-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 SII_RS08510 d1b2fb328c7047645193662584e65cbc 232 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 126 154 - T 22-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 SII_RS08510 d1b2fb328c7047645193662584e65cbc 232 Gene3D G3DSA:2.160.10.10 85 220 5.2E-48 T 22-04-2016 SII_RS08510 d1b2fb328c7047645193662584e65cbc 232 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 161 196 5.4E-11 T 22-04-2016 IPR001451 Hexapeptide repeat SII_RS08510 d1b2fb328c7047645193662584e65cbc 232 Hamap MF_01691 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase [dapH]. 3 231 41.617 T 22-04-2016 IPR019873 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase, DapH GO:0009089|GO:0047200 KEGG: 00300+2.3.1.89|MetaCyc: PWY-2941|UniPathway: UPA00034 SII_RS08510 d1b2fb328c7047645193662584e65cbc 232 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 87 115 2.7E-5 T 22-04-2016 IPR001451 Hexapeptide repeat SII_RS08510 d1b2fb328c7047645193662584e65cbc 232 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 118 152 4.4E-9 T 22-04-2016 IPR001451 Hexapeptide repeat SII_RS08510 d1b2fb328c7047645193662584e65cbc 232 PANTHER PTHR23416:SF50 48 232 5.8E-51 T 22-04-2016 SII_RS08510 d1b2fb328c7047645193662584e65cbc 232 PANTHER PTHR23416 48 232 5.8E-51 T 22-04-2016 SII_RS08510 d1b2fb328c7047645193662584e65cbc 232 Gene3D G3DSA:3.30.70.250 4 83 2.6E-31 T 22-04-2016 SII_RS08510 d1b2fb328c7047645193662584e65cbc 232 TIGRFAM TIGR03532 DapD_Ac: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase 8 231 6.0E-106 T 22-04-2016 IPR019873 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase, DapH GO:0009089|GO:0047200 KEGG: 00300+2.3.1.89|MetaCyc: PWY-2941|UniPathway: UPA00034 SII_RS08510 d1b2fb328c7047645193662584e65cbc 232 Pfam PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal 6 82 1.1E-21 T 22-04-2016 IPR013710 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase, N-terminal GO:0047200 KEGG: 00300+2.3.1.89|MetaCyc: PWY-2941|UniPathway: UPA00034 SII_RS03785 74f04fd3d2eee49a49167356a7114230 285 Pfam PF00557 Metallopeptidase family M24 129 270 2.1E-29 T 22-04-2016 IPR000994 Peptidase M24, structural domain SII_RS03785 74f04fd3d2eee49a49167356a7114230 285 Pfam PF00557 Metallopeptidase family M24 12 101 1.3E-8 T 22-04-2016 IPR000994 Peptidase M24, structural domain SII_RS03785 74f04fd3d2eee49a49167356a7114230 285 PANTHER PTHR10804:SF108 1 101 1.9E-156 T 22-04-2016 SII_RS03785 74f04fd3d2eee49a49167356a7114230 285 PANTHER PTHR10804:SF108 127 283 1.9E-156 T 22-04-2016 SII_RS03785 74f04fd3d2eee49a49167356a7114230 285 PANTHER PTHR10804 1 101 1.9E-156 T 22-04-2016 SII_RS03785 74f04fd3d2eee49a49167356a7114230 285 PANTHER PTHR10804 127 283 1.9E-156 T 22-04-2016 SII_RS03785 74f04fd3d2eee49a49167356a7114230 285 Gene3D G3DSA:3.90.230.10 1 279 1.1E-77 T 22-04-2016 IPR000994 Peptidase M24, structural domain SII_RS03785 74f04fd3d2eee49a49167356a7114230 285 Hamap MF_01974 Methionine aminopeptidase [map]. 2 279 35.712 T 22-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 SII_RS03785 74f04fd3d2eee49a49167356a7114230 285 SUPERFAMILY SSF55920 1 101 1.99E-67 T 22-04-2016 IPR000994 Peptidase M24, structural domain SII_RS03785 74f04fd3d2eee49a49167356a7114230 285 SUPERFAMILY SSF55920 128 278 1.99E-67 T 22-04-2016 IPR000994 Peptidase M24, structural domain SII_RS04845 48cb1b46117c89f44d49cf5f39038282 339 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 4 336 3.2E-141 T 22-04-2016 IPR005886 UDP-glucose 4-epimerase GalE GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|UniPathway: UPA00214 SII_RS04845 48cb1b46117c89f44d49cf5f39038282 339 Gene3D G3DSA:3.90.25.10 265 338 5.9E-54 T 22-04-2016 SII_RS04845 48cb1b46117c89f44d49cf5f39038282 339 Gene3D G3DSA:3.90.25.10 181 233 5.9E-54 T 22-04-2016 SII_RS04845 48cb1b46117c89f44d49cf5f39038282 339 PRINTS PR01713 Nucleotide sugar epimerase signature 232 247 1.8E-6 T 22-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 SII_RS04845 48cb1b46117c89f44d49cf5f39038282 339 PRINTS PR01713 Nucleotide sugar epimerase signature 296 313 1.8E-6 T 22-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 SII_RS04845 48cb1b46117c89f44d49cf5f39038282 339 PRINTS PR01713 Nucleotide sugar epimerase signature 257 272 1.8E-6 T 22-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 SII_RS04845 48cb1b46117c89f44d49cf5f39038282 339 Pfam PF16363 GDP-mannose 4,6 dehydratase 6 325 6.7E-62 T 22-04-2016 IPR016040 NAD(P)-binding domain SII_RS04845 48cb1b46117c89f44d49cf5f39038282 339 PANTHER PTHR10366 4 339 3.4E-156 T 22-04-2016 SII_RS04845 48cb1b46117c89f44d49cf5f39038282 339 PANTHER PTHR10366:SF39 4 339 3.4E-156 T 22-04-2016 SII_RS04845 48cb1b46117c89f44d49cf5f39038282 339 Gene3D G3DSA:3.40.50.720 2 180 3.0E-55 T 22-04-2016 IPR016040 NAD(P)-binding domain SII_RS04845 48cb1b46117c89f44d49cf5f39038282 339 SUPERFAMILY SSF51735 1 336 3.08E-98 T 22-04-2016 IPR016040 NAD(P)-binding domain SII_RS00760 eeb79e57e6d323761463f9a6a9809041 449 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 409 426 - T 22-04-2016 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 SII_RS00760 eeb79e57e6d323761463f9a6a9809041 449 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 1 436 24.472 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 SII_RS00760 eeb79e57e6d323761463f9a6a9809041 449 Gene3D G3DSA:3.40.50.10490 201 418 2.2E-92 T 22-04-2016 SII_RS00760 eeb79e57e6d323761463f9a6a9809041 449 Pfam PF00342 Phosphoglucose isomerase 77 426 1.7E-25 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 SII_RS00760 eeb79e57e6d323761463f9a6a9809041 449 Gene3D G3DSA:3.40.50.10490 70 200 7.3E-26 T 22-04-2016 SII_RS00760 eeb79e57e6d323761463f9a6a9809041 449 PANTHER PTHR11469 57 447 5.2E-154 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 SII_RS00760 eeb79e57e6d323761463f9a6a9809041 449 SUPERFAMILY SSF53697 6 448 4.45E-135 T 22-04-2016 SII_RS00760 eeb79e57e6d323761463f9a6a9809041 449 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 203 216 - T 22-04-2016 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 SII_RS00760 eeb79e57e6d323761463f9a6a9809041 449 PRINTS PR00662 Glucose-6-phosphate isomerase signature 409 422 1.4E-25 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 SII_RS00760 eeb79e57e6d323761463f9a6a9809041 449 PRINTS PR00662 Glucose-6-phosphate isomerase signature 395 409 1.4E-25 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 SII_RS00760 eeb79e57e6d323761463f9a6a9809041 449 PRINTS PR00662 Glucose-6-phosphate isomerase signature 377 395 1.4E-25 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 SII_RS00760 eeb79e57e6d323761463f9a6a9809041 449 PRINTS PR00662 Glucose-6-phosphate isomerase signature 274 295 1.4E-25 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 SII_RS00760 eeb79e57e6d323761463f9a6a9809041 449 PRINTS PR00662 Glucose-6-phosphate isomerase signature 199 217 1.4E-25 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 SII_RS00760 eeb79e57e6d323761463f9a6a9809041 449 PRINTS PR00662 Glucose-6-phosphate isomerase signature 77 96 1.4E-25 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 SII_RS06300 ee2ef2fa16001a201c4ece15e6003507 218 PANTHER PTHR11911 1 133 1.2E-60 T 22-04-2016 SII_RS06300 ee2ef2fa16001a201c4ece15e6003507 218 Gene3D G3DSA:3.30.70.260 141 202 2.4E-13 T 22-04-2016 SII_RS06300 ee2ef2fa16001a201c4ece15e6003507 218 Pfam PF00571 CBS domain 3 55 6.3E-15 T 22-04-2016 IPR000644 CBS domain SII_RS06300 ee2ef2fa16001a201c4ece15e6003507 218 Pfam PF00571 CBS domain 77 131 9.2E-12 T 22-04-2016 IPR000644 CBS domain SII_RS06300 ee2ef2fa16001a201c4ece15e6003507 218 SUPERFAMILY SSF55021 137 195 1.87E-6 T 22-04-2016 SII_RS06300 ee2ef2fa16001a201c4ece15e6003507 218 Gene3D G3DSA:3.10.580.10 1 132 6.7E-35 T 22-04-2016 SII_RS06300 ee2ef2fa16001a201c4ece15e6003507 218 PANTHER PTHR11911:SF104 1 133 1.2E-60 T 22-04-2016 SII_RS06300 ee2ef2fa16001a201c4ece15e6003507 218 SUPERFAMILY SSF54631 1 132 4.48E-34 T 22-04-2016 SII_RS06300 ee2ef2fa16001a201c4ece15e6003507 218 SMART SM00116 84 131 3.9E-9 T 22-04-2016 IPR000644 CBS domain SII_RS06300 ee2ef2fa16001a201c4ece15e6003507 218 SMART SM00116 10 57 1.6E-9 T 22-04-2016 IPR000644 CBS domain SII_RS07820 7d04751be722fbd6cffd9706fb22dfe5 717 PANTHER PTHR24221 152 712 9.1E-111 T 22-04-2016 SII_RS07820 7d04751be722fbd6cffd9706fb22dfe5 717 SMART SM00382 522 698 5.0E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain SII_RS07820 7d04751be722fbd6cffd9706fb22dfe5 717 Pfam PF00664 ABC transporter transmembrane region 170 450 2.4E-42 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SII_RS07820 7d04751be722fbd6cffd9706fb22dfe5 717 ProSitePatterns PS00211 ABC transporters family signature. 633 647 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SII_RS07820 7d04751be722fbd6cffd9706fb22dfe5 717 Pfam PF03412 Peptidase C39 family 8 143 3.3E-32 T 22-04-2016 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 SII_RS07820 7d04751be722fbd6cffd9706fb22dfe5 717 Pfam PF00005 ABC transporter 513 661 2.4E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SII_RS07820 7d04751be722fbd6cffd9706fb22dfe5 717 Gene3D G3DSA:3.90.70.10 11 141 1.5E-13 T 22-04-2016 SII_RS07820 7d04751be722fbd6cffd9706fb22dfe5 717 SUPERFAMILY SSF90123 157 480 4.84E-59 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SII_RS07820 7d04751be722fbd6cffd9706fb22dfe5 717 PANTHER PTHR24221:SF138 152 712 9.1E-111 T 22-04-2016 SII_RS07820 7d04751be722fbd6cffd9706fb22dfe5 717 SUPERFAMILY SSF52540 492 712 3.62E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS07820 7d04751be722fbd6cffd9706fb22dfe5 717 Gene3D G3DSA:1.20.1560.10 157 479 9.1E-63 T 22-04-2016 SII_RS07820 7d04751be722fbd6cffd9706fb22dfe5 717 Gene3D G3DSA:3.40.50.300 498 713 1.3E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS06260 474656cec2f116efcaca6310de4685ae 209 Gene3D G3DSA:1.10.1670.10 125 201 2.4E-29 T 22-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal SII_RS06260 474656cec2f116efcaca6310de4685ae 209 SMART SM00478 40 188 8.4E-62 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 SII_RS06260 474656cec2f116efcaca6310de4685ae 209 ProSitePatterns PS01155 Endonuclease III family signature. 104 133 - T 22-04-2016 IPR004036 Endonuclease III-like, conserved site-2 Reactome: REACT_216 SII_RS06260 474656cec2f116efcaca6310de4685ae 209 Pfam PF00633 Helix-hairpin-helix motif 102 129 2.8E-8 T 22-04-2016 IPR000445 Helix-hairpin-helix motif GO:0003677 SII_RS06260 474656cec2f116efcaca6310de4685ae 209 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 36 172 4.4E-26 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 SII_RS06260 474656cec2f116efcaca6310de4685ae 209 SUPERFAMILY SSF48150 5 201 3.77E-69 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 SII_RS06260 474656cec2f116efcaca6310de4685ae 209 PIRSF PIRSF001435 1 202 1.2E-47 T 22-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 SII_RS06260 474656cec2f116efcaca6310de4685ae 209 Gene3D G3DSA:1.10.340.30 26 124 3.0E-39 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 SII_RS06260 474656cec2f116efcaca6310de4685ae 209 PANTHER PTHR10359 9 198 1.4E-78 T 22-04-2016 SII_RS06260 474656cec2f116efcaca6310de4685ae 209 TIGRFAM TIGR01083 nth: endonuclease III 5 197 1.6E-72 T 22-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 SII_RS06260 474656cec2f116efcaca6310de4685ae 209 Hamap MF_00942 Endonuclease III [nth]. 2 209 35.526 T 22-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 SII_RS03490 babb1cbaace03a3e3f9dec1d625795de 205 Pfam PF08241 Methyltransferase domain 62 155 3.1E-19 T 22-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 SII_RS03490 babb1cbaace03a3e3f9dec1d625795de 205 PANTHER PTHR10108 39 156 8.6E-24 T 22-04-2016 SII_RS03490 babb1cbaace03a3e3f9dec1d625795de 205 PANTHER PTHR10108:SF701 39 156 8.6E-24 T 22-04-2016 SII_RS03490 babb1cbaace03a3e3f9dec1d625795de 205 Gene3D G3DSA:3.40.50.150 44 194 7.7E-30 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SII_RS03490 babb1cbaace03a3e3f9dec1d625795de 205 SUPERFAMILY SSF53335 32 192 4.91E-30 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SII_RS04100 dbfb3a3a7eee0ac20ebadf159dc13328 519 Gene3D G3DSA:1.10.3080.10 17 447 1.9E-90 T 22-04-2016 IPR014743 Chloride channel, core GO:0005216|GO:0055085 SII_RS04100 dbfb3a3a7eee0ac20ebadf159dc13328 519 PANTHER PTHR11689 1 484 7.0E-80 T 22-04-2016 SII_RS04100 dbfb3a3a7eee0ac20ebadf159dc13328 519 Pfam PF02080 TrkA-C domain 454 518 4.7E-9 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SII_RS04100 dbfb3a3a7eee0ac20ebadf159dc13328 519 SUPERFAMILY SSF116726 443 517 1.7E-10 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SII_RS04100 dbfb3a3a7eee0ac20ebadf159dc13328 519 PANTHER PTHR11689:SF96 1 484 7.0E-80 T 22-04-2016 SII_RS04100 dbfb3a3a7eee0ac20ebadf159dc13328 519 PRINTS PR00762 Chloride channel signature 393 412 1.5E-25 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 SII_RS04100 dbfb3a3a7eee0ac20ebadf159dc13328 519 PRINTS PR00762 Chloride channel signature 375 391 1.5E-25 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 SII_RS04100 dbfb3a3a7eee0ac20ebadf159dc13328 519 PRINTS PR00762 Chloride channel signature 92 109 1.5E-25 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 SII_RS04100 dbfb3a3a7eee0ac20ebadf159dc13328 519 PRINTS PR00762 Chloride channel signature 172 191 1.5E-25 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 SII_RS04100 dbfb3a3a7eee0ac20ebadf159dc13328 519 PRINTS PR00762 Chloride channel signature 340 360 1.5E-25 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 SII_RS04100 dbfb3a3a7eee0ac20ebadf159dc13328 519 SUPERFAMILY SSF81340 17 445 7.32E-106 T 22-04-2016 IPR014743 Chloride channel, core GO:0005216|GO:0055085 SII_RS04100 dbfb3a3a7eee0ac20ebadf159dc13328 519 Gene3D G3DSA:3.30.70.1450 450 518 1.5E-5 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SII_RS04100 dbfb3a3a7eee0ac20ebadf159dc13328 519 Pfam PF00654 Voltage gated chloride channel 81 425 5.8E-88 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 SII_RS02550 361a6361ce47aed6aa631fa6798ed648 449 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 38 48 - T 22-04-2016 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 SII_RS02550 361a6361ce47aed6aa631fa6798ed648 449 Gene3D G3DSA:3.50.50.60 270 326 7.0E-69 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SII_RS02550 361a6361ce47aed6aa631fa6798ed648 449 Gene3D G3DSA:3.50.50.60 3 141 7.0E-69 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SII_RS02550 361a6361ce47aed6aa631fa6798ed648 449 Gene3D G3DSA:3.50.50.60 142 269 8.5E-31 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SII_RS02550 361a6361ce47aed6aa631fa6798ed648 449 Gene3D G3DSA:3.30.390.30 327 449 2.5E-39 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 SII_RS02550 361a6361ce47aed6aa631fa6798ed648 449 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 317 1.7E-61 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SII_RS02550 361a6361ce47aed6aa631fa6798ed648 449 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 168 186 6.7E-26 T 22-04-2016 SII_RS02550 361a6361ce47aed6aa631fa6798ed648 449 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 6.7E-26 T 22-04-2016 SII_RS02550 361a6361ce47aed6aa631fa6798ed648 449 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 131 149 6.7E-26 T 22-04-2016 SII_RS02550 361a6361ce47aed6aa631fa6798ed648 449 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 282 304 6.7E-26 T 22-04-2016 SII_RS02550 361a6361ce47aed6aa631fa6798ed648 449 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 253 269 6.7E-26 T 22-04-2016 SII_RS02550 361a6361ce47aed6aa631fa6798ed648 449 SUPERFAMILY SSF55424 335 449 2.06E-34 T 22-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 SII_RS02550 361a6361ce47aed6aa631fa6798ed648 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 2.0E-62 T 22-04-2016 SII_RS02550 361a6361ce47aed6aa631fa6798ed648 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 401 416 2.0E-62 T 22-04-2016 SII_RS02550 361a6361ce47aed6aa631fa6798ed648 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 168 193 2.0E-62 T 22-04-2016 SII_RS02550 361a6361ce47aed6aa631fa6798ed648 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 37 52 2.0E-62 T 22-04-2016 SII_RS02550 361a6361ce47aed6aa631fa6798ed648 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 254 268 2.0E-62 T 22-04-2016 SII_RS02550 361a6361ce47aed6aa631fa6798ed648 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 134 143 2.0E-62 T 22-04-2016 SII_RS02550 361a6361ce47aed6aa631fa6798ed648 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 297 304 2.0E-62 T 22-04-2016 SII_RS02550 361a6361ce47aed6aa631fa6798ed648 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 334 355 2.0E-62 T 22-04-2016 SII_RS02550 361a6361ce47aed6aa631fa6798ed648 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 423 443 2.0E-62 T 22-04-2016 SII_RS02550 361a6361ce47aed6aa631fa6798ed648 449 SUPERFAMILY SSF51905 1 366 3.24E-54 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SII_RS02550 361a6361ce47aed6aa631fa6798ed648 449 PANTHER PTHR22912:SF106 1 449 3.1E-221 T 22-04-2016 SII_RS02550 361a6361ce47aed6aa631fa6798ed648 449 PIRSF PIRSF000350 1 445 5.6E-86 T 22-04-2016 SII_RS02550 361a6361ce47aed6aa631fa6798ed648 449 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 338 448 5.5E-33 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 SII_RS02550 361a6361ce47aed6aa631fa6798ed648 449 TIGRFAM TIGR01421 gluta_reduc_1: glutathione-disulfide reductase 2 449 8.1E-217 T 22-04-2016 IPR006322 Glutathione reductase, eukaryote/bacterial GO:0004362|GO:0006749|GO:0050660|GO:0050661|GO:0055114 KEGG: 00480+1.8.1.7|MetaCyc: PWY-4081 SII_RS02550 361a6361ce47aed6aa631fa6798ed648 449 PANTHER PTHR22912 1 449 3.1E-221 T 22-04-2016 SII_RS06585 d275dbc9d3b9897e08f4bf3f8cc23b03 1495 Gene3D G3DSA:3.40.50.300 268 439 5.7E-7 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS06585 d275dbc9d3b9897e08f4bf3f8cc23b03 1495 SUPERFAMILY SSF52540 265 467 9.61E-6 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS06585 d275dbc9d3b9897e08f4bf3f8cc23b03 1495 SUPERFAMILY SSF48371 1092 1121 5.31E-5 T 22-04-2016 IPR016024 Armadillo-type fold GO:0005488 SII_RS06585 d275dbc9d3b9897e08f4bf3f8cc23b03 1495 SUPERFAMILY SSF48371 1182 1480 5.31E-5 T 22-04-2016 IPR016024 Armadillo-type fold GO:0005488 SII_RS04600 eb236b9a38e909ba5bfa3827fada4327 578 SUPERFAMILY SSF52540 327 569 5.53E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS04600 eb236b9a38e909ba5bfa3827fada4327 578 ProSitePatterns PS00211 ABC transporters family signature. 471 485 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SII_RS04600 eb236b9a38e909ba5bfa3827fada4327 578 SUPERFAMILY SSF90123 2 315 3.79E-63 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SII_RS04600 eb236b9a38e909ba5bfa3827fada4327 578 Pfam PF00005 ABC transporter 349 499 1.1E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SII_RS04600 eb236b9a38e909ba5bfa3827fada4327 578 PANTHER PTHR24221:SF190 1 578 3.9E-151 T 22-04-2016 SII_RS04600 eb236b9a38e909ba5bfa3827fada4327 578 PANTHER PTHR24221 1 578 3.9E-151 T 22-04-2016 SII_RS04600 eb236b9a38e909ba5bfa3827fada4327 578 Gene3D G3DSA:3.40.50.300 331 562 7.2E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS04600 eb236b9a38e909ba5bfa3827fada4327 578 SMART SM00382 358 545 2.8E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain SII_RS04600 eb236b9a38e909ba5bfa3827fada4327 578 Gene3D G3DSA:1.20.1560.10 1 315 1.0E-59 T 22-04-2016 SII_RS04600 eb236b9a38e909ba5bfa3827fada4327 578 Pfam PF00664 ABC transporter transmembrane region 17 282 4.8E-41 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SII_RS05880 48efd675a674e5deb642854a29165e52 228 Gene3D G3DSA:1.10.10.10 151 226 2.1E-13 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SII_RS05880 48efd675a674e5deb642854a29165e52 228 Pfam PF00027 Cyclic nucleotide-binding domain 34 111 7.1E-10 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain SII_RS05880 48efd675a674e5deb642854a29165e52 228 SMART SM00419 169 217 0.0011 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 SII_RS05880 48efd675a674e5deb642854a29165e52 228 PANTHER PTHR24567 1 224 2.7E-25 T 22-04-2016 SII_RS05880 48efd675a674e5deb642854a29165e52 228 Gene3D G3DSA:2.60.120.10 11 147 2.9E-20 T 22-04-2016 IPR014710 RmlC-like jelly roll fold SII_RS05880 48efd675a674e5deb642854a29165e52 228 SUPERFAMILY SSF51206 23 145 6.42E-24 T 22-04-2016 IPR018490 Cyclic nucleotide-binding-like SII_RS05880 48efd675a674e5deb642854a29165e52 228 Pfam PF13545 Crp-like helix-turn-helix domain 154 219 3.5E-9 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 SII_RS05880 48efd675a674e5deb642854a29165e52 228 SUPERFAMILY SSF46785 150 225 9.9E-13 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SII_RS02155 cb62149c70283d12c9e31026d2baf21a 172 PIRSF PIRSF005384 1 147 2.8E-47 T 22-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 SII_RS02155 cb62149c70283d12c9e31026d2baf21a 172 SUPERFAMILY SSF89623 1 144 4.05E-47 T 22-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 SII_RS02155 cb62149c70283d12c9e31026d2baf21a 172 TIGRFAM TIGR00689 rpiB_lacA_lacB: sugar-phosphate isomerase, RpiB/LacA/LacB family 3 144 1.8E-38 T 22-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 SII_RS02155 cb62149c70283d12c9e31026d2baf21a 172 Pfam PF02502 Ribose/Galactose Isomerase 3 141 4.0E-41 T 22-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 SII_RS02155 cb62149c70283d12c9e31026d2baf21a 172 Gene3D G3DSA:3.40.1400.10 1 145 5.1E-48 T 22-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 SII_RS02155 cb62149c70283d12c9e31026d2baf21a 172 PANTHER PTHR30345 1 172 1.5E-78 T 22-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 SII_RS02155 cb62149c70283d12c9e31026d2baf21a 172 PANTHER PTHR30345:SF4 1 172 1.5E-78 T 22-04-2016 SII_RS07305 1ea5b10cd266006fdf6c44464719a03e 353 PANTHER PTHR24220:SF549 7 268 1.6E-140 T 22-04-2016 IPR026253 Methionine import ATP-binding protein MetN GO:0005524|GO:0015821|GO:0042626 SII_RS07305 1ea5b10cd266006fdf6c44464719a03e 353 Gene3D G3DSA:3.30.70.260 245 350 3.6E-25 T 22-04-2016 SII_RS07305 1ea5b10cd266006fdf6c44464719a03e 353 SMART SM00930 274 349 1.4E-23 T 22-04-2016 IPR018449 NIL domain SII_RS07305 1ea5b10cd266006fdf6c44464719a03e 353 SUPERFAMILY SSF52540 5 248 1.82E-79 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS07305 1ea5b10cd266006fdf6c44464719a03e 353 SMART SM00382 34 226 3.5E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain SII_RS07305 1ea5b10cd266006fdf6c44464719a03e 353 Pfam PF09383 NIL domain 277 348 1.3E-16 T 22-04-2016 IPR018449 NIL domain SII_RS07305 1ea5b10cd266006fdf6c44464719a03e 353 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SII_RS07305 1ea5b10cd266006fdf6c44464719a03e 353 SUPERFAMILY SSF55021 264 350 1.37E-18 T 22-04-2016 SII_RS07305 1ea5b10cd266006fdf6c44464719a03e 353 Gene3D G3DSA:3.40.50.300 4 244 2.7E-81 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS07305 1ea5b10cd266006fdf6c44464719a03e 353 Pfam PF00005 ABC transporter 26 177 5.7E-35 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SII_RS07305 1ea5b10cd266006fdf6c44464719a03e 353 PANTHER PTHR24220 7 268 1.6E-140 T 22-04-2016 SII_RS08940 9a9576bf436f5b45df4a70fb0516758c 736 ProSitePatterns PS00850 Glycine radical domain signature. 692 700 - T 22-04-2016 IPR019777 Formate C-acetyltransferase glycine radical, conserved site SII_RS08940 9a9576bf436f5b45df4a70fb0516758c 736 Pfam PF03477 ATP cone domain 15 106 2.9E-21 T 22-04-2016 IPR005144 ATP-cone domain SII_RS08940 9a9576bf436f5b45df4a70fb0516758c 736 SUPERFAMILY SSF51998 137 703 9.77E-198 T 22-04-2016 SII_RS08940 9a9576bf436f5b45df4a70fb0516758c 736 TIGRFAM TIGR02487 NrdD: anaerobic ribonucleoside-triphosphate reductase 131 721 1.0E-183 T 22-04-2016 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.17.4.2|KEGG: 00240+1.17.4.2|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 SII_RS08940 9a9576bf436f5b45df4a70fb0516758c 736 Gene3D G3DSA:3.20.70.20 139 702 5.2E-189 T 22-04-2016 SII_RS08940 9a9576bf436f5b45df4a70fb0516758c 736 PANTHER PTHR21075 7 727 1.4E-276 T 22-04-2016 SII_RS08940 9a9576bf436f5b45df4a70fb0516758c 736 Pfam PF13597 Anaerobic ribonucleoside-triphosphate reductase 132 721 1.4E-183 T 22-04-2016 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.17.4.2|KEGG: 00240+1.17.4.2|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 SII_RS07255 c3c3366be22bf3e1b92b80e98991a4c0 324 PANTHER PTHR18919:SF109 27 322 1.8E-117 T 22-04-2016 SII_RS07255 c3c3366be22bf3e1b92b80e98991a4c0 324 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 234 323 3.2E-32 T 22-04-2016 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 SII_RS07255 c3c3366be22bf3e1b92b80e98991a4c0 324 Gene3D G3DSA:3.40.47.10 1 160 8.3E-62 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SII_RS07255 c3c3366be22bf3e1b92b80e98991a4c0 324 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 106 183 2.9E-30 T 22-04-2016 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 SII_RS07255 c3c3366be22bf3e1b92b80e98991a4c0 324 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 2 324 67.828 T 22-04-2016 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 SII_RS07255 c3c3366be22bf3e1b92b80e98991a4c0 324 PANTHER PTHR18919 27 322 1.8E-117 T 22-04-2016 SII_RS07255 c3c3366be22bf3e1b92b80e98991a4c0 324 SUPERFAMILY SSF53901 2 323 4.64E-63 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SII_RS07255 c3c3366be22bf3e1b92b80e98991a4c0 324 Gene3D G3DSA:3.40.47.10 161 322 1.2E-46 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SII_RS07255 c3c3366be22bf3e1b92b80e98991a4c0 324 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 3 323 1.7E-107 T 22-04-2016 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 SII_RS01180 74c3ebb80fb1481cae0f348ef425d297 354 PANTHER PTHR11076 1 353 1.4E-136 T 22-04-2016 SII_RS01180 74c3ebb80fb1481cae0f348ef425d297 354 SUPERFAMILY SSF56672 5 247 2.4E-92 T 22-04-2016 SII_RS01180 74c3ebb80fb1481cae0f348ef425d297 354 Gene3D G3DSA:1.10.150.20 179 248 5.0E-23 T 22-04-2016 SII_RS01180 74c3ebb80fb1481cae0f348ef425d297 354 Gene3D G3DSA:3.30.1490.100 254 353 5.7E-29 T 22-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SII_RS01180 74c3ebb80fb1481cae0f348ef425d297 354 Pfam PF11799 impB/mucB/samB family C-terminal domain 250 353 1.0E-18 T 22-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SII_RS01180 74c3ebb80fb1481cae0f348ef425d297 354 Hamap MF_01113 DNA polymerase IV [dinB]. 11 354 37.472 T 22-04-2016 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SII_RS01180 74c3ebb80fb1481cae0f348ef425d297 354 Gene3D G3DSA:3.30.70.270 79 177 8.7E-34 T 22-04-2016 SII_RS01180 74c3ebb80fb1481cae0f348ef425d297 354 Pfam PF00817 impB/mucB/samB family 17 167 1.6E-50 T 22-04-2016 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SII_RS01180 74c3ebb80fb1481cae0f348ef425d297 354 SUPERFAMILY SSF100879 251 351 4.51E-26 T 22-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SII_RS01180 74c3ebb80fb1481cae0f348ef425d297 354 Pfam PF11798 IMS family HHH motif 179 210 1.3E-7 T 22-04-2016 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SII_RS04255 ce52d01e9363c4238691da4f64a009fd 273 Pfam PF04439 Streptomycin adenylyltransferase 1 269 9.4E-85 T 22-04-2016 IPR007530 Aminoglycoside 6-adenylyltransferase SII_RS04255 ce52d01e9363c4238691da4f64a009fd 273 SUPERFAMILY SSF81631 130 270 6.67E-46 T 22-04-2016 SII_RS04255 ce52d01e9363c4238691da4f64a009fd 273 Gene3D G3DSA:1.20.120.330 146 271 4.6E-46 T 22-04-2016 SII_RS04255 ce52d01e9363c4238691da4f64a009fd 273 Gene3D G3DSA:3.30.460.10 9 145 1.1E-50 T 22-04-2016 SII_RS04255 ce52d01e9363c4238691da4f64a009fd 273 SUPERFAMILY SSF81301 1 126 2.62E-33 T 22-04-2016 SII_RS04255 ce52d01e9363c4238691da4f64a009fd 273 PIRSF PIRSF000812 1 272 4.2E-103 T 22-04-2016 IPR007530 Aminoglycoside 6-adenylyltransferase SII_RS07755 fd8d0b05f868ef73e9e052009390b8e5 271 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 22 262 3.6E-63 T 22-04-2016 SII_RS07755 fd8d0b05f868ef73e9e052009390b8e5 271 PANTHER PTHR24322 20 148 9.6E-113 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SII_RS07755 fd8d0b05f868ef73e9e052009390b8e5 271 PANTHER PTHR24322 164 200 9.6E-113 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SII_RS07755 fd8d0b05f868ef73e9e052009390b8e5 271 SUPERFAMILY SSF51735 14 264 5.44E-79 T 22-04-2016 IPR016040 NAD(P)-binding domain SII_RS07755 fd8d0b05f868ef73e9e052009390b8e5 271 Gene3D G3DSA:3.40.50.720 11 265 5.7E-83 T 22-04-2016 IPR016040 NAD(P)-binding domain SII_RS07755 fd8d0b05f868ef73e9e052009390b8e5 271 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 151 179 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 SII_RS07755 fd8d0b05f868ef73e9e052009390b8e5 271 PANTHER PTHR24322:SF536 20 148 9.6E-113 T 22-04-2016 SII_RS07755 fd8d0b05f868ef73e9e052009390b8e5 271 PANTHER PTHR24322:SF536 164 200 9.6E-113 T 22-04-2016 SII_RS07755 fd8d0b05f868ef73e9e052009390b8e5 271 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 164 183 3.86E-12 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SII_RS07755 fd8d0b05f868ef73e9e052009390b8e5 271 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 91 102 3.86E-12 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SII_RS07755 fd8d0b05f868ef73e9e052009390b8e5 271 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 144 152 3.86E-12 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SII_RS07755 fd8d0b05f868ef73e9e052009390b8e5 271 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 91 102 4.62E-41 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SII_RS07755 fd8d0b05f868ef73e9e052009390b8e5 271 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 164 183 4.62E-41 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SII_RS07755 fd8d0b05f868ef73e9e052009390b8e5 271 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 17 34 4.62E-41 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SII_RS07755 fd8d0b05f868ef73e9e052009390b8e5 271 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 138 154 4.62E-41 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SII_RS07755 fd8d0b05f868ef73e9e052009390b8e5 271 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 185 202 4.62E-41 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SII_RS07755 fd8d0b05f868ef73e9e052009390b8e5 271 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 226 246 4.62E-41 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SII_RS07215 886d4b13bef24d0ae9acdd1c3b0c9b24 455 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 287 294 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 SII_RS07215 886d4b13bef24d0ae9acdd1c3b0c9b24 455 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 4.0E-45 T 22-04-2016 IPR005481 Biotin carboxylase-like, N-terminal domain SII_RS07215 886d4b13bef24d0ae9acdd1c3b0c9b24 455 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 323 5.2E-75 T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 SII_RS07215 886d4b13bef24d0ae9acdd1c3b0c9b24 455 Gene3D G3DSA:3.30.1490.20 130 201 1.4E-30 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 SII_RS07215 886d4b13bef24d0ae9acdd1c3b0c9b24 455 Gene3D G3DSA:3.40.50.20 1 129 1.8E-50 T 22-04-2016 IPR016185 Pre-ATP-grasp domain SII_RS07215 886d4b13bef24d0ae9acdd1c3b0c9b24 455 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 446 8.3E-204 T 22-04-2016 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 SII_RS07215 886d4b13bef24d0ae9acdd1c3b0c9b24 455 Pfam PF02785 Biotin carboxylase C-terminal domain 337 444 9.3E-37 T 22-04-2016 IPR005482 Biotin carboxylase, C-terminal SII_RS07215 886d4b13bef24d0ae9acdd1c3b0c9b24 455 SUPERFAMILY SSF51246 332 445 2.2E-39 T 22-04-2016 IPR011054 Rudiment single hybrid motif SII_RS07215 886d4b13bef24d0ae9acdd1c3b0c9b24 455 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 153 167 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 SII_RS07215 886d4b13bef24d0ae9acdd1c3b0c9b24 455 SMART SM00878 337 444 1.5E-55 T 22-04-2016 IPR005482 Biotin carboxylase, C-terminal SII_RS07215 886d4b13bef24d0ae9acdd1c3b0c9b24 455 SUPERFAMILY SSF52440 1 113 2.66E-48 T 22-04-2016 IPR016185 Pre-ATP-grasp domain SII_RS07215 886d4b13bef24d0ae9acdd1c3b0c9b24 455 PANTHER PTHR18866 1 445 1.5E-287 T 22-04-2016 SII_RS07215 886d4b13bef24d0ae9acdd1c3b0c9b24 455 SUPERFAMILY SSF56059 83 353 6.36E-69 T 22-04-2016 SII_RS07215 886d4b13bef24d0ae9acdd1c3b0c9b24 455 Gene3D G3DSA:3.30.470.20 206 447 2.1E-93 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 SII_RS05210 fbf3ac80caaf92cdac41a3a3e2a816e1 427 PIRSF PIRSF000505 1 427 1.0E-111 T 22-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 SII_RS05210 fbf3ac80caaf92cdac41a3a3e2a816e1 427 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 421 1.1E-117 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 SII_RS05210 fbf3ac80caaf92cdac41a3a3e2a816e1 427 PANTHER PTHR21090:SF5 5 427 4.9E-172 T 22-04-2016 SII_RS05210 fbf3ac80caaf92cdac41a3a3e2a816e1 427 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 12 426 1.4E-131 T 22-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 SII_RS05210 fbf3ac80caaf92cdac41a3a3e2a816e1 427 ProSitePatterns PS00104 EPSP synthase signature 1. 86 100 - T 22-04-2016 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 SII_RS05210 fbf3ac80caaf92cdac41a3a3e2a816e1 427 PANTHER PTHR21090 5 427 4.9E-172 T 22-04-2016 SII_RS05210 fbf3ac80caaf92cdac41a3a3e2a816e1 427 ProSitePatterns PS00885 EPSP synthase signature 2. 337 355 - T 22-04-2016 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 SII_RS05210 fbf3ac80caaf92cdac41a3a3e2a816e1 427 Gene3D G3DSA:3.65.10.10 229 423 6.6E-53 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 SII_RS05210 fbf3ac80caaf92cdac41a3a3e2a816e1 427 SUPERFAMILY SSF55205 4 424 2.45E-133 T 22-04-2016 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 SII_RS05210 fbf3ac80caaf92cdac41a3a3e2a816e1 427 Gene3D G3DSA:3.65.10.10 20 228 1.6E-56 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 SII_RS05210 fbf3ac80caaf92cdac41a3a3e2a816e1 427 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 8 427 32.996 T 22-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 SII_RS01685 efe11cc0cdcab08b701880cd377b6983 186 PANTHER PTHR34478 1 184 1.1E-86 T 22-04-2016 SII_RS01685 efe11cc0cdcab08b701880cd377b6983 186 Pfam PF04011 LemA family 4 181 2.4E-69 T 22-04-2016 IPR007156 LemA SII_RS01685 efe11cc0cdcab08b701880cd377b6983 186 SUPERFAMILY SSF140478 23 170 9.42E-54 T 22-04-2016 IPR023353 LemA-like domain SII_RS01685 efe11cc0cdcab08b701880cd377b6983 186 Gene3D G3DSA:1.20.1440.20 11 181 3.4E-65 T 22-04-2016 IPR023353 LemA-like domain SII_RS01685 efe11cc0cdcab08b701880cd377b6983 186 PANTHER PTHR34478:SF2 1 184 1.1E-86 T 22-04-2016 SII_RS08305 062de315de3303bf3c891f0aa936e75c 556 Gene3D G3DSA:1.10.1790.10 327 412 1.2E-18 T 22-04-2016 IPR011608 PRD domain GO:0006355 SII_RS08305 062de315de3303bf3c891f0aa936e75c 556 Gene3D G3DSA:1.10.10.10 84 155 2.3E-7 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SII_RS08305 062de315de3303bf3c891f0aa936e75c 556 Pfam PF00874 PRD domain 321 409 1.8E-19 T 22-04-2016 IPR011608 PRD domain GO:0006355 SII_RS08305 062de315de3303bf3c891f0aa936e75c 556 Pfam PF00874 PRD domain 209 298 1.4E-5 T 22-04-2016 IPR011608 PRD domain GO:0006355 SII_RS08305 062de315de3303bf3c891f0aa936e75c 556 PANTHER PTHR36203:SF1 4 551 1.0E-124 T 22-04-2016 SII_RS08305 062de315de3303bf3c891f0aa936e75c 556 SUPERFAMILY SSF63520 310 410 8.24E-20 T 22-04-2016 IPR011608 PRD domain GO:0006355 SII_RS08305 062de315de3303bf3c891f0aa936e75c 556 SUPERFAMILY SSF46785 87 134 9.44E-6 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SII_RS08305 062de315de3303bf3c891f0aa936e75c 556 Gene3D G3DSA:3.40.50.270 422 496 8.5E-4 T 22-04-2016 SII_RS08305 062de315de3303bf3c891f0aa936e75c 556 PANTHER PTHR36203 4 551 1.0E-124 T 22-04-2016 SII_RS08305 062de315de3303bf3c891f0aa936e75c 556 Pfam PF08279 HTH domain 104 152 1.1E-5 T 22-04-2016 IPR013196 Helix-turn-helix, type 11 SII_RS02945 dc09e66ed3e6716912965de679c1694f 263 Gene3D G3DSA:3.40.50.1820 5 252 1.8E-59 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SII_RS02945 dc09e66ed3e6716912965de679c1694f 263 PANTHER PTHR10907:SF33 5 217 2.9E-38 T 22-04-2016 SII_RS02945 dc09e66ed3e6716912965de679c1694f 263 SUPERFAMILY SSF53474 3 252 1.05E-45 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SII_RS02945 dc09e66ed3e6716912965de679c1694f 263 PANTHER PTHR10907 5 217 2.9E-38 T 22-04-2016 SII_RS02945 dc09e66ed3e6716912965de679c1694f 263 Pfam PF00756 Putative esterase 10 250 7.1E-17 T 22-04-2016 IPR000801 Putative esterase SII_RS02435 eb7a517898bc84c7364dfcd220e318cf 333 Gene3D G3DSA:3.40.50.620 158 293 5.1E-30 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SII_RS02435 eb7a517898bc84c7364dfcd220e318cf 333 Pfam PF02698 DUF218 domain 162 307 9.2E-30 T 22-04-2016 IPR003848 Domain of unknown function DUF218 SII_RS02435 eb7a517898bc84c7364dfcd220e318cf 333 PANTHER PTHR30336:SF2 45 333 3.9E-62 T 22-04-2016 SII_RS02435 eb7a517898bc84c7364dfcd220e318cf 333 PANTHER PTHR30336 45 333 3.9E-62 T 22-04-2016 SII_RS09260 f278995300a21d33b0cbbb136d039085 275 Pfam PF08282 haloacid dehalogenase-like hydrolase 9 269 3.4E-65 T 22-04-2016 IPR023214 HAD-like domain SII_RS09260 f278995300a21d33b0cbbb136d039085 275 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 8 269 3.4E-56 T 22-04-2016 IPR000150 Cof protein GO:0016787 SII_RS09260 f278995300a21d33b0cbbb136d039085 275 PANTHER PTHR10000:SF8 1 275 3.2E-58 T 22-04-2016 SII_RS09260 f278995300a21d33b0cbbb136d039085 275 ProSitePatterns PS01229 Hypothetical cof family signature 2. 223 245 - T 22-04-2016 SII_RS09260 f278995300a21d33b0cbbb136d039085 275 PANTHER PTHR10000 1 275 3.2E-58 T 22-04-2016 SII_RS09260 f278995300a21d33b0cbbb136d039085 275 ProSitePatterns PS01228 Hypothetical cof family signature 1. 8 19 - T 22-04-2016 IPR000150 Cof protein GO:0016787 SII_RS09260 f278995300a21d33b0cbbb136d039085 275 Gene3D G3DSA:3.30.1240.10 91 188 1.5E-12 T 22-04-2016 SII_RS09260 f278995300a21d33b0cbbb136d039085 275 SUPERFAMILY SSF56784 2 273 1.25E-65 T 22-04-2016 IPR023214 HAD-like domain SII_RS09260 f278995300a21d33b0cbbb136d039085 275 Gene3D G3DSA:3.40.50.1000 189 274 3.5E-50 T 22-04-2016 IPR023214 HAD-like domain SII_RS09260 f278995300a21d33b0cbbb136d039085 275 Gene3D G3DSA:3.40.50.1000 2 77 3.5E-50 T 22-04-2016 IPR023214 HAD-like domain SII_RS09260 f278995300a21d33b0cbbb136d039085 275 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 8 242 1.2E-29 T 22-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 SII_RS04525 a1b85e133cd425d0435e30ac78c542ed 139 Gene3D G3DSA:3.30.70.141 1 138 3.9E-48 T 22-04-2016 SII_RS04525 a1b85e133cd425d0435e30ac78c542ed 139 SUPERFAMILY SSF54919 1 138 8.51E-46 T 22-04-2016 SII_RS04525 a1b85e133cd425d0435e30ac78c542ed 139 PRINTS PR01243 Nucleoside diphosphate kinase signature 49 68 6.5E-30 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SII_RS04525 a1b85e133cd425d0435e30ac78c542ed 139 PRINTS PR01243 Nucleoside diphosphate kinase signature 69 86 6.5E-30 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SII_RS04525 a1b85e133cd425d0435e30ac78c542ed 139 PRINTS PR01243 Nucleoside diphosphate kinase signature 4 26 6.5E-30 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SII_RS04525 a1b85e133cd425d0435e30ac78c542ed 139 PRINTS PR01243 Nucleoside diphosphate kinase signature 118 137 6.5E-30 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SII_RS04525 a1b85e133cd425d0435e30ac78c542ed 139 PANTHER PTHR11349 1 137 6.4E-52 T 22-04-2016 SII_RS04525 a1b85e133cd425d0435e30ac78c542ed 139 SMART SM00562 1 139 8.4E-48 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SII_RS04525 a1b85e133cd425d0435e30ac78c542ed 139 Pfam PF00334 Nucleoside diphosphate kinase 2 138 8.2E-44 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SII_RS04525 a1b85e133cd425d0435e30ac78c542ed 139 ProSitePatterns PS00469 Nucleoside diphosphate kinases active site. 118 126 - T 22-04-2016 IPR023005 Nucleoside diphosphate kinase, active site KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SII_RS02090 01df0c2a7ffbc67a2404f82d7afd5e62 348 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 4 337 38.231 T 22-04-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SII_RS02090 01df0c2a7ffbc67a2404f82d7afd5e62 348 PANTHER PTHR23132 1 345 9.6E-156 T 22-04-2016 SII_RS02090 01df0c2a7ffbc67a2404f82d7afd5e62 348 Gene3D G3DSA:3.30.470.20 208 333 2.9E-49 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 SII_RS02090 01df0c2a7ffbc67a2404f82d7afd5e62 348 Gene3D G3DSA:3.30.470.20 117 134 2.9E-49 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 SII_RS02090 01df0c2a7ffbc67a2404f82d7afd5e62 348 SUPERFAMILY SSF52440 3 126 9.02E-31 T 22-04-2016 IPR016185 Pre-ATP-grasp domain SII_RS02090 01df0c2a7ffbc67a2404f82d7afd5e62 348 Gene3D G3DSA:3.30.1490.20 144 207 8.8E-25 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 SII_RS02090 01df0c2a7ffbc67a2404f82d7afd5e62 348 PANTHER PTHR23132:SF8 1 345 9.6E-156 T 22-04-2016 SII_RS02090 01df0c2a7ffbc67a2404f82d7afd5e62 348 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 94 105 - T 22-04-2016 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SII_RS02090 01df0c2a7ffbc67a2404f82d7afd5e62 348 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 279 307 - T 22-04-2016 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SII_RS02090 01df0c2a7ffbc67a2404f82d7afd5e62 348 SUPERFAMILY SSF56059 127 336 1.77E-57 T 22-04-2016 SII_RS02090 01df0c2a7ffbc67a2404f82d7afd5e62 348 Pfam PF01820 D-ala D-ala ligase N-terminus 5 117 5.6E-26 T 22-04-2016 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SII_RS02090 01df0c2a7ffbc67a2404f82d7afd5e62 348 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 6 336 4.6E-100 T 22-04-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SII_RS02090 01df0c2a7ffbc67a2404f82d7afd5e62 348 Gene3D G3DSA:3.40.50.20 1 116 2.3E-31 T 22-04-2016 IPR016185 Pre-ATP-grasp domain SII_RS02090 01df0c2a7ffbc67a2404f82d7afd5e62 348 Pfam PF07478 D-ala D-ala ligase C-terminus 135 333 9.7E-73 T 22-04-2016 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SII_RS02090 01df0c2a7ffbc67a2404f82d7afd5e62 348 PIRSF PIRSF039102 1 345 3.8E-100 T 22-04-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SII_RS07640 01ec00c04060e52cbe883120fdbc469f 257 Gene3D G3DSA:3.40.1190.20 5 247 3.7E-66 T 22-04-2016 IPR029056 Ribokinase-like SII_RS07640 01ec00c04060e52cbe883120fdbc469f 257 Pfam PF08543 Phosphomethylpyrimidine kinase 13 247 4.6E-62 T 22-04-2016 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase UniPathway: UPA00647 SII_RS07640 01ec00c04060e52cbe883120fdbc469f 257 PANTHER PTHR20858 5 247 4.3E-62 T 22-04-2016 SII_RS07640 01ec00c04060e52cbe883120fdbc469f 257 SUPERFAMILY SSF53613 4 247 1.87E-57 T 22-04-2016 IPR029056 Ribokinase-like SII_RS01435 218ef5b02cca38ab58f045d243eaedc3 347 Pfam PF00535 Glycosyl transferase family 2 5 130 6.5E-11 T 22-04-2016 IPR001173 Glycosyltransferase 2-like SII_RS01435 218ef5b02cca38ab58f045d243eaedc3 347 PANTHER PTHR10859 4 282 1.2E-57 T 22-04-2016 SII_RS01435 218ef5b02cca38ab58f045d243eaedc3 347 SUPERFAMILY SSF53448 4 224 1.22E-18 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SII_RS01435 218ef5b02cca38ab58f045d243eaedc3 347 Pfam PF04138 GtrA-like protein 220 339 2.9E-12 T 22-04-2016 IPR007267 GtrA-like protein GO:0000271|GO:0006810|GO:0016021 SII_RS01435 218ef5b02cca38ab58f045d243eaedc3 347 PANTHER PTHR10859:SF84 4 282 1.2E-57 T 22-04-2016 SII_RS01435 218ef5b02cca38ab58f045d243eaedc3 347 Gene3D G3DSA:3.90.550.10 5 114 4.0E-5 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SII_RS05985 1eaa9e9b7b21a32ac50ae379d735822e 213 PANTHER PTHR30408 19 200 2.8E-15 T 22-04-2016 SII_RS05985 1eaa9e9b7b21a32ac50ae379d735822e 213 PANTHER PTHR30408:SF2 19 200 2.8E-15 T 22-04-2016 SII_RS05985 1eaa9e9b7b21a32ac50ae379d735822e 213 SUPERFAMILY SSF116734 21 209 4.74E-31 T 22-04-2016 SII_RS05985 1eaa9e9b7b21a32ac50ae379d735822e 213 Pfam PF01420 Type I restriction modification DNA specificity domain 21 195 1.7E-16 T 22-04-2016 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 SII_RS04880 27e14fe33a13d9d924a00a66075ca2a5 821 SUPERFAMILY SSF53649 483 716 1.68E-10 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 SII_RS04880 27e14fe33a13d9d924a00a66075ca2a5 821 Gene3D G3DSA:3.40.720.10 483 759 3.0E-5 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 SII_RS04880 27e14fe33a13d9d924a00a66075ca2a5 821 Pfam PF00884 Sulfatase 481 761 1.3E-33 T 22-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 SII_RS07465 056a69c5b3b7c9c29452cb997797d25c 346 SUPERFAMILY SSF51569 5 341 4.61E-90 T 22-04-2016 SII_RS07465 056a69c5b3b7c9c29452cb997797d25c 346 Gene3D G3DSA:3.20.20.70 4 344 7.9E-101 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SII_RS07465 056a69c5b3b7c9c29452cb997797d25c 346 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 29 342 1.2E-73 T 22-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 SII_RS07465 056a69c5b3b7c9c29452cb997797d25c 346 PIRSF PIRSF001361 1 346 9.1E-110 T 22-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 SII_RS07465 056a69c5b3b7c9c29452cb997797d25c 346 PANTHER PTHR21225 10 341 1.1E-162 T 22-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 SII_RS07465 056a69c5b3b7c9c29452cb997797d25c 346 Pfam PF00793 DAHP synthetase I family 37 333 7.0E-47 T 22-04-2016 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 SII_RS02350 b1e8b6e6b5d2f1a2102219a3a4509d20 380 SUPERFAMILY SSF53448 2 262 1.84E-84 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SII_RS02350 b1e8b6e6b5d2f1a2102219a3a4509d20 380 SUPERFAMILY SSF53448 323 339 1.84E-84 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SII_RS02350 b1e8b6e6b5d2f1a2102219a3a4509d20 380 SUPERFAMILY SSF51161 268 360 3.68E-12 T 22-04-2016 IPR011004 Trimeric LpxA-like SII_RS02350 b1e8b6e6b5d2f1a2102219a3a4509d20 380 PANTHER PTHR22572:SF10 6 364 2.2E-166 T 22-04-2016 SII_RS02350 b1e8b6e6b5d2f1a2102219a3a4509d20 380 ProSitePatterns PS00810 ADP-glucose pyrophosphorylase signature 3. 189 199 - T 22-04-2016 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|UniPathway: UPA00164 SII_RS02350 b1e8b6e6b5d2f1a2102219a3a4509d20 380 PANTHER PTHR22572 6 364 2.2E-166 T 22-04-2016 SII_RS02350 b1e8b6e6b5d2f1a2102219a3a4509d20 380 ProSitePatterns PS00808 ADP-glucose pyrophosphorylase signature 1. 11 30 - T 22-04-2016 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|UniPathway: UPA00164 SII_RS02350 b1e8b6e6b5d2f1a2102219a3a4509d20 380 Hamap MF_00624 Glucose-1-phosphate adenylyltransferase [glgC]. 2 373 47.356 T 22-04-2016 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|UniPathway: UPA00164 SII_RS02350 b1e8b6e6b5d2f1a2102219a3a4509d20 380 Pfam PF00483 Nucleotidyl transferase 7 258 2.9E-66 T 22-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 SII_RS02350 b1e8b6e6b5d2f1a2102219a3a4509d20 380 TIGRFAM TIGR02091 glgC: glucose-1-phosphate adenylyltransferase 5 359 7.8E-146 T 22-04-2016 IPR011831 Glucose-1-phosphate adenylyltransferase GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|UniPathway: UPA00164 SII_RS02350 b1e8b6e6b5d2f1a2102219a3a4509d20 380 ProSitePatterns PS00809 ADP-glucose pyrophosphorylase signature 2. 98 106 - T 22-04-2016 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|UniPathway: UPA00164 SII_RS02350 b1e8b6e6b5d2f1a2102219a3a4509d20 380 Gene3D G3DSA:3.90.550.10 306 349 9.5E-87 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SII_RS02350 b1e8b6e6b5d2f1a2102219a3a4509d20 380 Gene3D G3DSA:3.90.550.10 4 269 9.5E-87 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SII_RS01225 e711ee69964d38c6197a4d75cc379c83 479 Pfam PF13520 Amino acid permease 9 457 2.2E-29 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 SII_RS01225 e711ee69964d38c6197a4d75cc379c83 479 PANTHER PTHR11785 448 477 5.1E-159 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 SII_RS01225 e711ee69964d38c6197a4d75cc379c83 479 PANTHER PTHR11785 7 432 5.1E-159 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 SII_RS01225 e711ee69964d38c6197a4d75cc379c83 479 PANTHER PTHR11785:SF277 448 477 5.1E-159 T 22-04-2016 SII_RS01225 e711ee69964d38c6197a4d75cc379c83 479 PANTHER PTHR11785:SF277 7 432 5.1E-159 T 22-04-2016 SII_RS01225 e711ee69964d38c6197a4d75cc379c83 479 PIRSF PIRSF006060 1 479 3.1E-37 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 SII_RS01500 13e22b224a24cf177b9bf37ef586df97 225 PIRSF PIRSF033111 1 224 7.0E-79 T 22-04-2016 IPR009214 Protein of unknown function DUF1129 SII_RS01500 13e22b224a24cf177b9bf37ef586df97 225 Pfam PF06570 Protein of unknown function (DUF1129) 8 217 7.2E-65 T 22-04-2016 IPR009214 Protein of unknown function DUF1129 SII_RS05815 6d72a28c3b7a8a41f98832348c72a100 104 PANTHER PTHR34581 2 86 3.2E-17 T 22-04-2016 SII_RS05815 6d72a28c3b7a8a41f98832348c72a100 104 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 3 100 9.6E-17 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 SII_RS05815 6d72a28c3b7a8a41f98832348c72a100 104 SUPERFAMILY SSF52794 1 89 1.67E-19 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 SII_RS05815 6d72a28c3b7a8a41f98832348c72a100 104 Gene3D G3DSA:3.40.50.270 1 89 7.2E-18 T 22-04-2016 SII_RS04545 dd7a18f7b6bca71a66bd8eb8f647a2d6 208 PANTHER PTHR22769 15 191 3.0E-42 T 22-04-2016 SII_RS04545 dd7a18f7b6bca71a66bd8eb8f647a2d6 208 PANTHER PTHR22769:SF32 15 191 3.0E-42 T 22-04-2016 SII_RS04545 dd7a18f7b6bca71a66bd8eb8f647a2d6 208 Pfam PF00293 NUDIX domain 76 178 2.4E-9 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 SII_RS04545 dd7a18f7b6bca71a66bd8eb8f647a2d6 208 Gene3D G3DSA:3.90.79.10 56 200 1.0E-25 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SII_RS04545 dd7a18f7b6bca71a66bd8eb8f647a2d6 208 SUPERFAMILY SSF55811 51 203 2.44E-27 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SII_RS04545 dd7a18f7b6bca71a66bd8eb8f647a2d6 208 Pfam PF12535 Hydrolase of X-linked nucleoside diphosphate N terminal 6 60 6.8E-26 T 22-04-2016 SII_RS08715 20968c5537450e14cebd816e7754ac65 178 Pfam PF00347 Ribosomal protein L6 91 164 1.6E-19 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 SII_RS08715 20968c5537450e14cebd816e7754ac65 178 Pfam PF00347 Ribosomal protein L6 12 82 8.3E-21 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 SII_RS08715 20968c5537450e14cebd816e7754ac65 178 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 176 4.0E-74 T 22-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 SII_RS08715 20968c5537450e14cebd816e7754ac65 178 SUPERFAMILY SSF56053 1 82 3.27E-26 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 SII_RS08715 20968c5537450e14cebd816e7754ac65 178 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 176 37.732 T 22-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 SII_RS08715 20968c5537450e14cebd816e7754ac65 178 Gene3D G3DSA:3.90.930.12 83 177 1.2E-37 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 SII_RS08715 20968c5537450e14cebd816e7754ac65 178 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 154 162 - T 22-04-2016 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SII_RS08715 20968c5537450e14cebd816e7754ac65 178 PIRSF PIRSF002162 1 177 1.5E-46 T 22-04-2016 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 SII_RS08715 20968c5537450e14cebd816e7754ac65 178 SUPERFAMILY SSF56053 83 177 1.15E-35 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 SII_RS08715 20968c5537450e14cebd816e7754ac65 178 PANTHER PTHR11655:SF14 1 178 5.4E-88 T 22-04-2016 SII_RS08715 20968c5537450e14cebd816e7754ac65 178 PANTHER PTHR11655 1 178 5.4E-88 T 22-04-2016 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 SII_RS08715 20968c5537450e14cebd816e7754ac65 178 PRINTS PR00059 Ribosomal protein L6 signature 71 96 2.9E-31 T 22-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 SII_RS08715 20968c5537450e14cebd816e7754ac65 178 PRINTS PR00059 Ribosomal protein L6 signature 141 162 2.9E-31 T 22-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 SII_RS08715 20968c5537450e14cebd816e7754ac65 178 PRINTS PR00059 Ribosomal protein L6 signature 99 115 2.9E-31 T 22-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 SII_RS08715 20968c5537450e14cebd816e7754ac65 178 Gene3D G3DSA:3.90.930.12 2 82 6.3E-31 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 SII_RS00300 40fbe156e21d203a4b5a8df555a49c22 431 Gene3D G3DSA:1.20.200.10 91 356 2.3E-89 T 22-04-2016 SII_RS00300 40fbe156e21d203a4b5a8df555a49c22 431 PANTHER PTHR11444 4 424 3.1E-171 T 22-04-2016 IPR000362 Fumarate lyase family SII_RS00300 40fbe156e21d203a4b5a8df555a49c22 431 Gene3D G3DSA:1.10.275.10 2 90 5.1E-35 T 22-04-2016 IPR024083 Fumarase/histidase, N-terminal SII_RS00300 40fbe156e21d203a4b5a8df555a49c22 431 Gene3D G3DSA:1.10.40.30 357 429 2.3E-34 T 22-04-2016 SII_RS00300 40fbe156e21d203a4b5a8df555a49c22 431 PRINTS PR00149 Fumarate lyase superfamily signature 88 106 8.4E-27 T 22-04-2016 IPR000362 Fumarate lyase family SII_RS00300 40fbe156e21d203a4b5a8df555a49c22 431 PRINTS PR00149 Fumarate lyase superfamily signature 261 277 8.4E-27 T 22-04-2016 IPR000362 Fumarate lyase family SII_RS00300 40fbe156e21d203a4b5a8df555a49c22 431 PRINTS PR00149 Fumarate lyase superfamily signature 133 151 8.4E-27 T 22-04-2016 IPR000362 Fumarate lyase family SII_RS00300 40fbe156e21d203a4b5a8df555a49c22 431 PRINTS PR00149 Fumarate lyase superfamily signature 216 243 8.4E-27 T 22-04-2016 IPR000362 Fumarate lyase family SII_RS00300 40fbe156e21d203a4b5a8df555a49c22 431 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 1 428 2.9E-169 T 22-04-2016 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 SII_RS00300 40fbe156e21d203a4b5a8df555a49c22 431 PRINTS PR00145 Argininosuccinate lyase family signature 216 240 3.2E-10 T 22-04-2016 SII_RS00300 40fbe156e21d203a4b5a8df555a49c22 431 PRINTS PR00145 Argininosuccinate lyase family signature 128 148 3.2E-10 T 22-04-2016 SII_RS00300 40fbe156e21d203a4b5a8df555a49c22 431 PRINTS PR00145 Argininosuccinate lyase family signature 261 277 3.2E-10 T 22-04-2016 SII_RS00300 40fbe156e21d203a4b5a8df555a49c22 431 PANTHER PTHR11444:SF2 4 424 3.1E-171 T 22-04-2016 SII_RS00300 40fbe156e21d203a4b5a8df555a49c22 431 SUPERFAMILY SSF48557 3 428 2.83E-135 T 22-04-2016 IPR008948 L-Aspartase-like GO:0003824 SII_RS00300 40fbe156e21d203a4b5a8df555a49c22 431 Pfam PF10397 Adenylosuccinate lyase C-terminus 350 428 3.0E-26 T 22-04-2016 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 SII_RS00300 40fbe156e21d203a4b5a8df555a49c22 431 ProSitePatterns PS00163 Fumarate lyases signature. 261 270 - T 22-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 SII_RS00300 40fbe156e21d203a4b5a8df555a49c22 431 Pfam PF00206 Lyase 7 286 2.7E-67 T 22-04-2016 IPR022761 Fumarate lyase, N-terminal SII_RS00300 40fbe156e21d203a4b5a8df555a49c22 431 SMART SM00998 349 429 4.8E-41 T 22-04-2016 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 SII_RS01140 e993b953aac984bea45c49eb7f5da713 314 PANTHER PTHR10977 1 299 5.8E-86 T 22-04-2016 IPR005935 Diphosphomevalonate/phosphomevalonate decarboxylase GO:0008299|GO:0016831 KEGG: 00900+4.1.1.33|MetaCyc: PWY-7391|MetaCyc: PWY-922 SII_RS01140 e993b953aac984bea45c49eb7f5da713 314 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 98 109 - T 22-04-2016 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 SII_RS01140 e993b953aac984bea45c49eb7f5da713 314 TIGRFAM TIGR01240 mevDPdecarb: diphosphomevalonate decarboxylase 7 301 3.8E-124 T 22-04-2016 IPR029765 Diphosphomevalonate decarboxylase GO:0004163|GO:0005829|GO:0019287 KEGG: 00900+4.1.1.33|MetaCyc: PWY-7391|MetaCyc: PWY-922 SII_RS01140 e993b953aac984bea45c49eb7f5da713 314 Gene3D G3DSA:3.30.230.10 2 168 1.4E-60 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SII_RS01140 e993b953aac984bea45c49eb7f5da713 314 PANTHER PTHR10977:SF3 1 299 5.8E-86 T 22-04-2016 SII_RS01140 e993b953aac984bea45c49eb7f5da713 314 PIRSF PIRSF015950 1 313 4.1E-98 T 22-04-2016 IPR005935 Diphosphomevalonate/phosphomevalonate decarboxylase GO:0008299|GO:0016831 KEGG: 00900+4.1.1.33|MetaCyc: PWY-7391|MetaCyc: PWY-922 SII_RS01140 e993b953aac984bea45c49eb7f5da713 314 Gene3D G3DSA:3.30.70.890 169 300 1.1E-52 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain SII_RS01140 e993b953aac984bea45c49eb7f5da713 314 SUPERFAMILY SSF55060 169 300 1.15E-41 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain SII_RS01140 e993b953aac984bea45c49eb7f5da713 314 Pfam PF00288 GHMP kinases N terminal domain 91 138 1.5E-8 T 22-04-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 SII_RS01140 e993b953aac984bea45c49eb7f5da713 314 SUPERFAMILY SSF54211 4 174 5.24E-34 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SII_RS01485 27823ec4a42d024f00462a6a7d0c3437 156 SUPERFAMILY SSF50249 1 156 4.11E-52 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SII_RS01485 27823ec4a42d024f00462a6a7d0c3437 156 PIRSF PIRSF002070 1 150 2.9E-37 T 22-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 SII_RS01485 27823ec4a42d024f00462a6a7d0c3437 156 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 1 156 9.2E-46 T 22-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 SII_RS01485 27823ec4a42d024f00462a6a7d0c3437 156 Gene3D G3DSA:2.40.50.140 1 156 1.1E-48 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SII_RS01485 27823ec4a42d024f00462a6a7d0c3437 156 Pfam PF00436 Single-strand binding protein family 2 103 6.5E-36 T 22-04-2016 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 SII_RS01485 27823ec4a42d024f00462a6a7d0c3437 156 Hamap MF_00984 Single-stranded DNA-binding protein. 2 107 35.458 T 22-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 SII_RS01485 27823ec4a42d024f00462a6a7d0c3437 156 PANTHER PTHR10302 1 156 5.2E-43 T 22-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 SII_RS02165 6926e2e4d1736e513f3839aa1298b888 159 SUPERFAMILY SSF55804 1 155 1.7E-29 T 22-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 SII_RS02165 6926e2e4d1736e513f3839aa1298b888 159 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 6 155 4.0E-32 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SII_RS02165 6926e2e4d1736e513f3839aa1298b888 159 PANTHER PTHR30505 1 158 1.9E-21 T 22-04-2016 SII_RS02165 6926e2e4d1736e513f3839aa1298b888 159 PANTHER PTHR30505:SF2 1 158 1.9E-21 T 22-04-2016 SII_RS02165 6926e2e4d1736e513f3839aa1298b888 159 Gene3D G3DSA:3.40.930.10 1 155 1.3E-36 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SII_RS09365 b48be78d568c93783beb6ce6c8273f3b 203 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 201 35.121 T 22-04-2016 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 SII_RS09365 b48be78d568c93783beb6ce6c8273f3b 203 PANTHER PTHR11831:SF4 1 199 9.1E-84 T 22-04-2016 SII_RS09365 b48be78d568c93783beb6ce6c8273f3b 203 PANTHER PTHR11831 1 199 9.1E-84 T 22-04-2016 IPR022801 Ribosomal protein S4/S9 SII_RS09365 b48be78d568c93783beb6ce6c8273f3b 203 SMART SM00363 93 157 3.6E-21 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SII_RS09365 b48be78d568c93783beb6ce6c8273f3b 203 Gene3D G3DSA:1.10.1050.10 1 96 6.6E-37 T 22-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 SII_RS09365 b48be78d568c93783beb6ce6c8273f3b 203 Gene3D G3DSA:3.10.290.10 97 192 1.9E-34 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SII_RS09365 b48be78d568c93783beb6ce6c8273f3b 203 Pfam PF01479 S4 domain 93 140 1.7E-22 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SII_RS09365 b48be78d568c93783beb6ce6c8273f3b 203 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 201 3.3E-76 T 22-04-2016 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 SII_RS09365 b48be78d568c93783beb6ce6c8273f3b 203 ProSitePatterns PS00632 Ribosomal protein S4 signature. 91 115 - T 22-04-2016 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 SII_RS09365 b48be78d568c93783beb6ce6c8273f3b 203 SUPERFAMILY SSF55174 3 201 1.22E-67 T 22-04-2016 SII_RS09365 b48be78d568c93783beb6ce6c8273f3b 203 SMART SM01390 3 92 1.4E-38 T 22-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 SII_RS09365 b48be78d568c93783beb6ce6c8273f3b 203 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 92 4.9E-24 T 22-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 SII_RS07720 f7923994e191f937a7bb230936168c01 632 PANTHER PTHR39210 1 623 9.0E-90 T 22-04-2016 SII_RS07720 f7923994e191f937a7bb230936168c01 632 Pfam PF07940 Heparinase II/III-like protein 339 501 1.3E-21 T 22-04-2016 IPR012480 Heparinase II/III-like MetaCyc: PWY-7651 SII_RS07720 f7923994e191f937a7bb230936168c01 632 Gene3D G3DSA:1.50.10.110 86 250 3.5E-9 T 22-04-2016 IPR008397 Alginate lyase domain GO:0016829|GO:0042597 KEGG: 00051+4.2.2.3|MetaCyc: PWY-6986 SII_RS07720 f7923994e191f937a7bb230936168c01 632 Pfam PF16889 Heparinase II/III N-terminus 41 285 1.8E-17 T 22-04-2016 IPR031680 Heparin-sulfate lyase, N-terminal MetaCyc: PWY-7651 SII_RS07720 f7923994e191f937a7bb230936168c01 632 SUPERFAMILY SSF48230 68 286 2.84E-31 T 22-04-2016 IPR008929 Chondroitin AC/alginate lyase SII_RS04905 074a8fa84729e5a22ae1a8f68629b76b 382 Pfam PF09314 Domain of unknown function (DUF1972) 1 185 2.9E-98 T 22-04-2016 IPR015393 Domain of unknown function DUF1972 SII_RS04905 074a8fa84729e5a22ae1a8f68629b76b 382 SUPERFAMILY SSF53756 5 380 6.28E-27 T 22-04-2016 SII_RS04905 074a8fa84729e5a22ae1a8f68629b76b 382 Pfam PF00534 Glycosyl transferases group 1 202 309 1.7E-6 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 SII_RS01285 38f4c27bc0bf1c64469e1b4f1de5a789 563 Gene3D G3DSA:2.60.120.200 184 452 1.7E-63 T 22-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain SII_RS01285 38f4c27bc0bf1c64469e1b4f1de5a789 563 Pfam PF02018 Carbohydrate binding domain 29 156 2.1E-11 T 22-04-2016 IPR003305 Carbohydrate-binding, CenC-like GO:0016798 SII_RS01285 38f4c27bc0bf1c64469e1b4f1de5a789 563 SUPERFAMILY SSF49899 183 451 3.28E-61 T 22-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain SII_RS01285 38f4c27bc0bf1c64469e1b4f1de5a789 563 PANTHER PTHR10963 187 448 1.2E-50 T 22-04-2016 SII_RS01285 38f4c27bc0bf1c64469e1b4f1de5a789 563 Pfam PF00722 Glycosyl hydrolases family 16 220 445 1.7E-31 T 22-04-2016 IPR000757 Glycoside hydrolase family 16 GO:0004553|GO:0005975 SII_RS01285 38f4c27bc0bf1c64469e1b4f1de5a789 563 Gene3D G3DSA:2.60.120.260 22 183 2.4E-13 T 22-04-2016 IPR008979 Galactose-binding domain-like SII_RS01285 38f4c27bc0bf1c64469e1b4f1de5a789 563 SUPERFAMILY SSF49785 25 181 1.56E-10 T 22-04-2016 IPR008979 Galactose-binding domain-like SII_RS09265 61fc4ae7cf71359e064e59960ccb22c5 163 Gene3D G3DSA:3.40.630.30 1 157 3.5E-46 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SII_RS09265 61fc4ae7cf71359e064e59960ccb22c5 163 SUPERFAMILY SSF55729 2 148 4.77E-16 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SII_RS02095 cb9e34a27cae327d9d8b8d6fa674b969 456 Pfam PF01225 Mur ligase family, catalytic domain 31 94 2.4E-6 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 SII_RS02095 cb9e34a27cae327d9d8b8d6fa674b969 456 Pfam PF08245 Mur ligase middle domain 105 285 2.5E-43 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SII_RS02095 cb9e34a27cae327d9d8b8d6fa674b969 456 SUPERFAMILY SSF53244 306 452 2.75E-29 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SII_RS02095 cb9e34a27cae327d9d8b8d6fa674b969 456 SUPERFAMILY SSF53623 101 301 6.41E-45 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SII_RS02095 cb9e34a27cae327d9d8b8d6fa674b969 456 Gene3D G3DSA:3.40.1190.10 82 299 4.3E-58 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SII_RS02095 cb9e34a27cae327d9d8b8d6fa674b969 456 Gene3D G3DSA:3.40.1390.10 1 78 1.1E-18 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 SII_RS02095 cb9e34a27cae327d9d8b8d6fa674b969 456 Pfam PF02875 Mur ligase family, glutamate ligase domain 307 390 1.9E-8 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SII_RS02095 cb9e34a27cae327d9d8b8d6fa674b969 456 PANTHER PTHR23135 14 454 1.0E-140 T 22-04-2016 SII_RS02095 cb9e34a27cae327d9d8b8d6fa674b969 456 PANTHER PTHR23135:SF3 14 454 1.0E-140 T 22-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SII_RS02095 cb9e34a27cae327d9d8b8d6fa674b969 456 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 3 453 31.221 T 22-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SII_RS02095 cb9e34a27cae327d9d8b8d6fa674b969 456 Gene3D G3DSA:3.90.190.20 305 454 9.7E-35 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SII_RS02095 cb9e34a27cae327d9d8b8d6fa674b969 456 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 31 452 2.0E-111 T 22-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SII_RS02095 cb9e34a27cae327d9d8b8d6fa674b969 456 SUPERFAMILY SSF63418 7 96 1.01E-20 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 SII_RS04265 e570eeed0ab4c56793da9267d7155c17 215 PANTHER PTHR30309:SF0 1 214 4.3E-82 T 22-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 SII_RS04265 e570eeed0ab4c56793da9267d7155c17 215 PANTHER PTHR30309 1 214 4.3E-82 T 22-04-2016 SII_RS04265 e570eeed0ab4c56793da9267d7155c17 215 SMART SM01207 9 194 3.3E-75 T 22-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 SII_RS04265 e570eeed0ab4c56793da9267d7155c17 215 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 6 202 18.901 T 22-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 SII_RS04265 e570eeed0ab4c56793da9267d7155c17 215 Pfam PF02660 Glycerol-3-phosphate acyltransferase 10 193 7.1E-51 T 22-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 SII_RS04265 e570eeed0ab4c56793da9267d7155c17 215 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 4 200 6.8E-51 T 22-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 SII_RS05830 9a733e56c6167ca81529999974a97d56 389 PANTHER PTHR23522 1 382 6.2E-29 T 22-04-2016 SII_RS05830 9a733e56c6167ca81529999974a97d56 389 Pfam PF07690 Major Facilitator Superfamily 13 286 6.4E-22 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SII_RS05830 9a733e56c6167ca81529999974a97d56 389 PANTHER PTHR23522:SF3 1 382 6.2E-29 T 22-04-2016 SII_RS05830 9a733e56c6167ca81529999974a97d56 389 SUPERFAMILY SSF103473 9 382 2.88E-49 T 22-04-2016 IPR020846 Major facilitator superfamily domain SII_RS05830 9a733e56c6167ca81529999974a97d56 389 Gene3D G3DSA:1.20.1250.20 200 383 1.0E-16 T 22-04-2016 SII_RS05830 9a733e56c6167ca81529999974a97d56 389 Gene3D G3DSA:1.20.1250.20 8 185 2.7E-20 T 22-04-2016 SII_RS06060 a0ff5ed4d05192cacfd23c83161bba82 513 SMART SM00382 28 235 8.6E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain SII_RS06060 a0ff5ed4d05192cacfd23c83161bba82 513 SMART SM00382 348 513 1.5E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain SII_RS06060 a0ff5ed4d05192cacfd23c83161bba82 513 PANTHER PTHR19211:SF65 1 508 0.0 T 22-04-2016 SII_RS06060 a0ff5ed4d05192cacfd23c83161bba82 513 Gene3D G3DSA:3.40.50.300 123 278 5.5E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS06060 a0ff5ed4d05192cacfd23c83161bba82 513 Gene3D G3DSA:3.40.50.300 325 510 6.1E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS06060 a0ff5ed4d05192cacfd23c83161bba82 513 Gene3D G3DSA:3.40.50.300 2 90 5.5E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS06060 a0ff5ed4d05192cacfd23c83161bba82 513 PANTHER PTHR19211 1 508 0.0 T 22-04-2016 SII_RS06060 a0ff5ed4d05192cacfd23c83161bba82 513 Pfam PF00005 ABC transporter 20 190 6.7E-24 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SII_RS06060 a0ff5ed4d05192cacfd23c83161bba82 513 Pfam PF00005 ABC transporter 341 468 5.1E-20 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SII_RS06060 a0ff5ed4d05192cacfd23c83161bba82 513 Pfam PF12848 ABC transporter 229 312 4.6E-21 T 22-04-2016 IPR032781 ABC-transporter extension domain SII_RS06060 a0ff5ed4d05192cacfd23c83161bba82 513 ProSitePatterns PS00211 ABC transporters family signature. 440 454 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SII_RS06060 a0ff5ed4d05192cacfd23c83161bba82 513 ProSitePatterns PS00211 ABC transporters family signature. 162 176 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SII_RS06060 a0ff5ed4d05192cacfd23c83161bba82 513 SUPERFAMILY SSF52540 307 510 1.2E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS06060 a0ff5ed4d05192cacfd23c83161bba82 513 SUPERFAMILY SSF52540 4 243 2.87E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS06430 651b6b9e9a015ba6b694ef39ab9c2108 930 SUPERFAMILY SSF47323 645 917 9.16E-73 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SII_RS06430 651b6b9e9a015ba6b694ef39ab9c2108 930 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 27 634 1.4E-196 T 22-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SII_RS06430 651b6b9e9a015ba6b694ef39ab9c2108 930 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 57 68 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SII_RS06430 651b6b9e9a015ba6b694ef39ab9c2108 930 Gene3D G3DSA:3.90.740.10 205 382 1.4E-46 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 SII_RS06430 651b6b9e9a015ba6b694ef39ab9c2108 930 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 520 533 1.1E-27 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 SII_RS06430 651b6b9e9a015ba6b694ef39ab9c2108 930 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 392 407 1.1E-27 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 SII_RS06430 651b6b9e9a015ba6b694ef39ab9c2108 930 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 50 61 1.1E-27 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 SII_RS06430 651b6b9e9a015ba6b694ef39ab9c2108 930 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 554 563 1.1E-27 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 SII_RS06430 651b6b9e9a015ba6b694ef39ab9c2108 930 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 228 251 1.1E-27 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 SII_RS06430 651b6b9e9a015ba6b694ef39ab9c2108 930 SUPERFAMILY SSF52374 1 200 4.22E-150 T 22-04-2016 SII_RS06430 651b6b9e9a015ba6b694ef39ab9c2108 930 SUPERFAMILY SSF52374 394 641 4.22E-150 T 22-04-2016 SII_RS06430 651b6b9e9a015ba6b694ef39ab9c2108 930 PANTHER PTHR11946:SF11 275 930 0.0 T 22-04-2016 SII_RS06430 651b6b9e9a015ba6b694ef39ab9c2108 930 PANTHER PTHR11946:SF11 5 249 0.0 T 22-04-2016 SII_RS06430 651b6b9e9a015ba6b694ef39ab9c2108 930 SUPERFAMILY SSF50677 202 394 8.16E-43 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 SII_RS06430 651b6b9e9a015ba6b694ef39ab9c2108 930 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 14 834 9.2E-279 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 SII_RS06430 651b6b9e9a015ba6b694ef39ab9c2108 930 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 1 916 19.371 T 22-04-2016 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5 SII_RS06430 651b6b9e9a015ba6b694ef39ab9c2108 930 Gene3D G3DSA:3.40.50.620 16 203 5.8E-139 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SII_RS06430 651b6b9e9a015ba6b694ef39ab9c2108 930 Gene3D G3DSA:3.40.50.620 394 631 5.8E-139 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SII_RS06430 651b6b9e9a015ba6b694ef39ab9c2108 930 Pfam PF06827 Zinc finger found in FPG and IleRS 885 913 1.0E-6 T 22-04-2016 IPR010663 Zinc finger, FPG/IleRS-type SII_RS06430 651b6b9e9a015ba6b694ef39ab9c2108 930 PANTHER PTHR11946 275 930 0.0 T 22-04-2016 SII_RS06430 651b6b9e9a015ba6b694ef39ab9c2108 930 PANTHER PTHR11946 5 249 0.0 T 22-04-2016 SII_RS06430 651b6b9e9a015ba6b694ef39ab9c2108 930 Gene3D G3DSA:1.10.730.10 634 818 1.3E-42 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SII_RS06430 651b6b9e9a015ba6b694ef39ab9c2108 930 Pfam PF08264 Anticodon-binding domain of tRNA 678 831 8.3E-28 T 22-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 SII_RS02190 8718b978ffdc85cff6e07029b3ee0ed2 277 SUPERFAMILY SSF63520 196 276 1.22E-15 T 22-04-2016 IPR011608 PRD domain GO:0006355 SII_RS02190 8718b978ffdc85cff6e07029b3ee0ed2 277 PANTHER PTHR30185 1 277 4.0E-86 T 22-04-2016 SII_RS02190 8718b978ffdc85cff6e07029b3ee0ed2 277 Pfam PF00874 PRD domain 77 163 9.7E-15 T 22-04-2016 IPR011608 PRD domain GO:0006355 SII_RS02190 8718b978ffdc85cff6e07029b3ee0ed2 277 Pfam PF00874 PRD domain 194 275 1.0E-13 T 22-04-2016 IPR011608 PRD domain GO:0006355 SII_RS02190 8718b978ffdc85cff6e07029b3ee0ed2 277 Gene3D G3DSA:1.10.1790.10 195 276 7.8E-19 T 22-04-2016 IPR011608 PRD domain GO:0006355 SII_RS02190 8718b978ffdc85cff6e07029b3ee0ed2 277 SMART SM01061 2 60 1.3E-24 T 22-04-2016 IPR004341 CAT RNA-binding domain GO:0003723 SII_RS02190 8718b978ffdc85cff6e07029b3ee0ed2 277 SUPERFAMILY SSF63520 57 163 1.29E-20 T 22-04-2016 IPR011608 PRD domain GO:0006355 SII_RS02190 8718b978ffdc85cff6e07029b3ee0ed2 277 PANTHER PTHR30185:SF2 1 277 4.0E-86 T 22-04-2016 SII_RS02190 8718b978ffdc85cff6e07029b3ee0ed2 277 SUPERFAMILY SSF50151 2 54 1.09E-14 T 22-04-2016 IPR004341 CAT RNA-binding domain GO:0003723 SII_RS02190 8718b978ffdc85cff6e07029b3ee0ed2 277 Pfam PF03123 CAT RNA binding domain 2 57 1.6E-19 T 22-04-2016 IPR004341 CAT RNA-binding domain GO:0003723 SII_RS02190 8718b978ffdc85cff6e07029b3ee0ed2 277 Gene3D G3DSA:1.10.1790.10 66 164 1.6E-18 T 22-04-2016 IPR011608 PRD domain GO:0006355 SII_RS02190 8718b978ffdc85cff6e07029b3ee0ed2 277 Gene3D G3DSA:2.30.24.10 2 55 1.5E-20 T 22-04-2016 IPR004341 CAT RNA-binding domain GO:0003723 SII_RS04355 ae030761056237fba5112c7e0cfdbcb5 162 Gene3D G3DSA:3.10.450.40 107 158 5.8E-11 T 22-04-2016 SII_RS04355 ae030761056237fba5112c7e0cfdbcb5 162 Gene3D G3DSA:3.10.450.40 35 106 3.4E-24 T 22-04-2016 SII_RS04355 ae030761056237fba5112c7e0cfdbcb5 162 SUPERFAMILY SSF54403 106 159 4.25E-9 T 22-04-2016 SII_RS04355 ae030761056237fba5112c7e0cfdbcb5 162 SUPERFAMILY SSF54403 42 106 2.55E-16 T 22-04-2016 SII_RS05010 17a6278533d7a26c576455f41dec9b15 413 PRINTS PR01952 Nisin biosynthesis protein NisC signature 347 370 1.1E-77 T 22-04-2016 IPR020468 Nisin biosynthesis protein, NisC SII_RS05010 17a6278533d7a26c576455f41dec9b15 413 PRINTS PR01952 Nisin biosynthesis protein NisC signature 300 323 1.1E-77 T 22-04-2016 IPR020468 Nisin biosynthesis protein, NisC SII_RS05010 17a6278533d7a26c576455f41dec9b15 413 PRINTS PR01952 Nisin biosynthesis protein NisC signature 178 201 1.1E-77 T 22-04-2016 IPR020468 Nisin biosynthesis protein, NisC SII_RS05010 17a6278533d7a26c576455f41dec9b15 413 PRINTS PR01952 Nisin biosynthesis protein NisC signature 98 116 1.1E-77 T 22-04-2016 IPR020468 Nisin biosynthesis protein, NisC SII_RS05010 17a6278533d7a26c576455f41dec9b15 413 PRINTS PR01952 Nisin biosynthesis protein NisC signature 117 135 1.1E-77 T 22-04-2016 IPR020468 Nisin biosynthesis protein, NisC SII_RS05010 17a6278533d7a26c576455f41dec9b15 413 PRINTS PR01952 Nisin biosynthesis protein NisC signature 4 23 1.1E-77 T 22-04-2016 IPR020468 Nisin biosynthesis protein, NisC SII_RS05010 17a6278533d7a26c576455f41dec9b15 413 PRINTS PR01952 Nisin biosynthesis protein NisC signature 50 66 1.1E-77 T 22-04-2016 IPR020468 Nisin biosynthesis protein, NisC SII_RS05010 17a6278533d7a26c576455f41dec9b15 413 PRINTS PR01952 Nisin biosynthesis protein NisC signature 388 409 1.1E-77 T 22-04-2016 IPR020468 Nisin biosynthesis protein, NisC SII_RS05010 17a6278533d7a26c576455f41dec9b15 413 PRINTS PR01952 Nisin biosynthesis protein NisC signature 224 245 1.1E-77 T 22-04-2016 IPR020468 Nisin biosynthesis protein, NisC SII_RS05010 17a6278533d7a26c576455f41dec9b15 413 PRINTS PR01952 Nisin biosynthesis protein NisC signature 67 82 1.1E-77 T 22-04-2016 IPR020468 Nisin biosynthesis protein, NisC SII_RS05010 17a6278533d7a26c576455f41dec9b15 413 PRINTS PR01952 Nisin biosynthesis protein NisC signature 251 274 1.1E-77 T 22-04-2016 IPR020468 Nisin biosynthesis protein, NisC SII_RS05010 17a6278533d7a26c576455f41dec9b15 413 PRINTS PR01952 Nisin biosynthesis protein NisC signature 153 177 1.1E-77 T 22-04-2016 IPR020468 Nisin biosynthesis protein, NisC SII_RS05010 17a6278533d7a26c576455f41dec9b15 413 SUPERFAMILY SSF158745 8 403 8.11E-79 T 22-04-2016 SII_RS05010 17a6278533d7a26c576455f41dec9b15 413 Pfam PF05147 Lanthionine synthetase C-like protein 31 397 1.2E-70 T 22-04-2016 IPR007822 Lanthionine synthetase C-like SII_RS05010 17a6278533d7a26c576455f41dec9b15 413 SMART SM01260 29 402 2.5E-27 T 22-04-2016 IPR007822 Lanthionine synthetase C-like SII_RS05010 17a6278533d7a26c576455f41dec9b15 413 PRINTS PR01950 LanC-like protein superfamily signature 203 219 6.0E-26 T 22-04-2016 IPR007822 Lanthionine synthetase C-like SII_RS05010 17a6278533d7a26c576455f41dec9b15 413 PRINTS PR01950 LanC-like protein superfamily signature 371 388 6.0E-26 T 22-04-2016 IPR007822 Lanthionine synthetase C-like SII_RS05010 17a6278533d7a26c576455f41dec9b15 413 PRINTS PR01950 LanC-like protein superfamily signature 323 336 6.0E-26 T 22-04-2016 IPR007822 Lanthionine synthetase C-like SII_RS05010 17a6278533d7a26c576455f41dec9b15 413 PRINTS PR01950 LanC-like protein superfamily signature 276 296 6.0E-26 T 22-04-2016 IPR007822 Lanthionine synthetase C-like SII_RS05010 17a6278533d7a26c576455f41dec9b15 413 PRINTS PR01950 LanC-like protein superfamily signature 80 98 6.0E-26 T 22-04-2016 IPR007822 Lanthionine synthetase C-like SII_RS05010 17a6278533d7a26c576455f41dec9b15 413 PRINTS PR01950 LanC-like protein superfamily signature 136 151 6.0E-26 T 22-04-2016 IPR007822 Lanthionine synthetase C-like SII_RS03700 928b47cc72c60cbcbe4e9a11c72f1d91 274 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 132 222 1.3E-32 T 22-04-2016 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 SII_RS03700 928b47cc72c60cbcbe4e9a11c72f1d91 274 SMART SM00898 2 116 2.4E-47 T 22-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 SII_RS03700 928b47cc72c60cbcbe4e9a11c72f1d91 274 SUPERFAMILY SSF46946 132 221 2.62E-27 T 22-04-2016 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 SII_RS03700 928b47cc72c60cbcbe4e9a11c72f1d91 274 ProSitePatterns PS01242 Zinc finger FPG-type signature. 247 271 - T 22-04-2016 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 SII_RS03700 928b47cc72c60cbcbe4e9a11c72f1d91 274 SMART SM01232 132 224 3.1E-40 T 22-04-2016 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 SII_RS03700 928b47cc72c60cbcbe4e9a11c72f1d91 274 SUPERFAMILY SSF81624 2 136 4.06E-39 T 22-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 SII_RS03700 928b47cc72c60cbcbe4e9a11c72f1d91 274 PANTHER PTHR22993:SF15 1 273 1.5E-113 T 22-04-2016 SII_RS03700 928b47cc72c60cbcbe4e9a11c72f1d91 274 Pfam PF06827 Zinc finger found in FPG and IleRS 244 271 2.9E-12 T 22-04-2016 IPR010663 Zinc finger, FPG/IleRS-type SII_RS03700 928b47cc72c60cbcbe4e9a11c72f1d91 274 PANTHER PTHR22993 1 273 1.5E-113 T 22-04-2016 SII_RS03700 928b47cc72c60cbcbe4e9a11c72f1d91 274 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 114 2.9E-32 T 22-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 SII_RS03700 928b47cc72c60cbcbe4e9a11c72f1d91 274 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 271 1.3E-111 T 22-04-2016 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 SII_RS03700 928b47cc72c60cbcbe4e9a11c72f1d91 274 Gene3D G3DSA:1.10.8.50 132 272 3.1E-48 T 22-04-2016 SII_RS03700 928b47cc72c60cbcbe4e9a11c72f1d91 274 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 272 42.664 T 22-04-2016 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 SII_RS03700 928b47cc72c60cbcbe4e9a11c72f1d91 274 Gene3D G3DSA:3.20.190.10 2 125 2.0E-36 T 22-04-2016 SII_RS03700 928b47cc72c60cbcbe4e9a11c72f1d91 274 SUPERFAMILY SSF57716 220 271 3.42E-17 T 22-04-2016 SII_RS09480 acd634f057c9aa588a81e3aef008f7d4 341 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 69 88 2.8E-25 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 SII_RS09480 acd634f057c9aa588a81e3aef008f7d4 341 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 16 32 2.8E-25 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 SII_RS09480 acd634f057c9aa588a81e3aef008f7d4 341 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 147 168 2.8E-25 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 SII_RS09480 acd634f057c9aa588a81e3aef008f7d4 341 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 202 212 2.8E-25 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 SII_RS09480 acd634f057c9aa588a81e3aef008f7d4 341 Gene3D G3DSA:3.40.50.620 3 217 1.3E-75 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SII_RS09480 acd634f057c9aa588a81e3aef008f7d4 341 Gene3D G3DSA:1.10.240.10 218 327 1.4E-33 T 22-04-2016 SII_RS09480 acd634f057c9aa588a81e3aef008f7d4 341 PANTHER PTHR10055:SF6 3 341 3.0E-181 T 22-04-2016 SII_RS09480 acd634f057c9aa588a81e3aef008f7d4 341 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 12 21 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SII_RS09480 acd634f057c9aa588a81e3aef008f7d4 341 Pfam PF00579 tRNA synthetases class I (W and Y) 4 290 4.0E-56 T 22-04-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SII_RS09480 acd634f057c9aa588a81e3aef008f7d4 341 SUPERFAMILY SSF52374 5 337 9.65E-77 T 22-04-2016 SII_RS09480 acd634f057c9aa588a81e3aef008f7d4 341 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 3 338 34.817 T 22-04-2016 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2 SII_RS09480 acd634f057c9aa588a81e3aef008f7d4 341 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 3 337 6.2E-77 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 SII_RS09480 acd634f057c9aa588a81e3aef008f7d4 341 PANTHER PTHR10055 3 341 3.0E-181 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 SII_RS02625 ccfbc9021643b40c013aecff43fe68c0 500 Gene3D G3DSA:3.20.20.60 4 94 5.1E-97 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 SII_RS02625 ccfbc9021643b40c013aecff43fe68c0 500 Gene3D G3DSA:3.20.20.60 197 354 5.1E-97 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 SII_RS02625 ccfbc9021643b40c013aecff43fe68c0 500 SUPERFAMILY SSF51621 2 96 2.62E-83 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 SII_RS02625 ccfbc9021643b40c013aecff43fe68c0 500 SUPERFAMILY SSF51621 184 367 2.62E-83 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 SII_RS02625 ccfbc9021643b40c013aecff43fe68c0 500 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 37 499 8.8E-150 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 SII_RS02625 ccfbc9021643b40c013aecff43fe68c0 500 Pfam PF02887 Pyruvate kinase, alpha/beta domain 385 496 1.9E-35 T 22-04-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 SII_RS02625 ccfbc9021643b40c013aecff43fe68c0 500 Pfam PF00224 Pyruvate kinase, barrel domain 3 370 9.9E-147 T 22-04-2016 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 SII_RS02625 ccfbc9021643b40c013aecff43fe68c0 500 SUPERFAMILY SSF52935 351 499 1.57E-40 T 22-04-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 SII_RS02625 ccfbc9021643b40c013aecff43fe68c0 500 PANTHER PTHR11817 4 16 5.1E-191 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 SII_RS02625 ccfbc9021643b40c013aecff43fe68c0 500 PANTHER PTHR11817 38 499 5.1E-191 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 SII_RS02625 ccfbc9021643b40c013aecff43fe68c0 500 PRINTS PR01050 Pyruvate kinase family signature 214 228 1.1E-65 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 SII_RS02625 ccfbc9021643b40c013aecff43fe68c0 500 PRINTS PR01050 Pyruvate kinase family signature 322 340 1.1E-65 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 SII_RS02625 ccfbc9021643b40c013aecff43fe68c0 500 PRINTS PR01050 Pyruvate kinase family signature 297 321 1.1E-65 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 SII_RS02625 ccfbc9021643b40c013aecff43fe68c0 500 PRINTS PR01050 Pyruvate kinase family signature 341 357 1.1E-65 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 SII_RS02625 ccfbc9021643b40c013aecff43fe68c0 500 PRINTS PR01050 Pyruvate kinase family signature 272 296 1.1E-65 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 SII_RS02625 ccfbc9021643b40c013aecff43fe68c0 500 PRINTS PR01050 Pyruvate kinase family signature 81 97 1.1E-65 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 SII_RS02625 ccfbc9021643b40c013aecff43fe68c0 500 PRINTS PR01050 Pyruvate kinase family signature 245 271 1.1E-65 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 SII_RS02625 ccfbc9021643b40c013aecff43fe68c0 500 Gene3D G3DSA:2.40.33.10 95 196 3.1E-22 T 22-04-2016 IPR015806 Pyruvate kinase, beta-barrel insert domain GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 SII_RS02625 ccfbc9021643b40c013aecff43fe68c0 500 SUPERFAMILY SSF50800 92 194 3.84E-18 T 22-04-2016 IPR011037 Pyruvate kinase-like, insert domain SII_RS02625 ccfbc9021643b40c013aecff43fe68c0 500 Gene3D G3DSA:3.40.1380.20 355 499 1.6E-47 T 22-04-2016 IPR015794 Pyruvate kinase, alpha/beta GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 SII_RS08485 2867cbed06bc95db437aee126037e3b3 418 Gene3D G3DSA:3.10.290.10 316 418 1.1E-32 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SII_RS08485 2867cbed06bc95db437aee126037e3b3 418 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 39 49 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SII_RS08485 2867cbed06bc95db437aee126037e3b3 418 Gene3D G3DSA:3.40.50.620 3 231 1.7E-101 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SII_RS08485 2867cbed06bc95db437aee126037e3b3 418 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 2 417 8.3E-132 T 22-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 SII_RS08485 2867cbed06bc95db437aee126037e3b3 418 SMART SM00363 352 414 1.5E-6 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SII_RS08485 2867cbed06bc95db437aee126037e3b3 418 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 215 227 1.6E-28 T 22-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 SII_RS08485 2867cbed06bc95db437aee126037e3b3 418 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 161 176 1.6E-28 T 22-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 SII_RS08485 2867cbed06bc95db437aee126037e3b3 418 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 182 204 1.6E-28 T 22-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 SII_RS08485 2867cbed06bc95db437aee126037e3b3 418 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 43 65 1.6E-28 T 22-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 SII_RS08485 2867cbed06bc95db437aee126037e3b3 418 Pfam PF00579 tRNA synthetases class I (W and Y) 28 322 2.2E-82 T 22-04-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SII_RS08485 2867cbed06bc95db437aee126037e3b3 418 SUPERFAMILY SSF52374 2 322 1.31E-108 T 22-04-2016 SII_RS08485 2867cbed06bc95db437aee126037e3b3 418 SUPERFAMILY SSF55174 321 417 1.41E-23 T 22-04-2016 SII_RS08485 2867cbed06bc95db437aee126037e3b3 418 Gene3D G3DSA:1.10.240.10 232 315 1.0E-42 T 22-04-2016 SII_RS08485 2867cbed06bc95db437aee126037e3b3 418 Pfam PF01479 S4 domain 356 397 9.9E-10 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SII_RS08485 2867cbed06bc95db437aee126037e3b3 418 Hamap MF_02006 Tyrosine--tRNA ligase [tyrS]. 1 418 44.556 T 22-04-2016 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 GO:0004831 KEGG: 00970+6.1.1.1 SII_RS08485 2867cbed06bc95db437aee126037e3b3 418 PANTHER PTHR11766 1 415 4.4E-208 T 22-04-2016 IPR024088 Tyrosine-tRNA ligase, bacterial-type GO:0004831 KEGG: 00970+6.1.1.1 SII_RS09540 40fb1ed4b2d6024e659278aeccc8a3c4 159 SUPERFAMILY SSF75217 1 157 2.35E-57 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases SII_RS09540 40fb1ed4b2d6024e659278aeccc8a3c4 159 Gene3D G3DSA:3.40.1280.10 1 159 2.5E-60 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal SII_RS09540 40fb1ed4b2d6024e659278aeccc8a3c4 159 TIGRFAM TIGR00246 tRNA_RlmH_YbeA: rRNA large subunit m3Psi methyltransferase RlmH 2 159 5.0E-54 T 22-04-2016 IPR016051 Ribosomal RNA large subunit methyltransferase H GO:0005737|GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SII_RS09540 40fb1ed4b2d6024e659278aeccc8a3c4 159 PANTHER PTHR33603 1 159 3.0E-64 T 22-04-2016 SII_RS09540 40fb1ed4b2d6024e659278aeccc8a3c4 159 PIRSF PIRSF004505 1 159 1.6E-52 T 22-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SII_RS09540 40fb1ed4b2d6024e659278aeccc8a3c4 159 PANTHER PTHR33603:SF1 1 159 3.0E-64 T 22-04-2016 SII_RS09540 40fb1ed4b2d6024e659278aeccc8a3c4 159 Pfam PF02590 Predicted SPOUT methyltransferase 1 158 7.9E-57 T 22-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SII_RS09540 40fb1ed4b2d6024e659278aeccc8a3c4 159 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 159 29.863 T 22-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SII_RS04175 1b9d6239a533a3e3427dfc79a09e4849 370 SUPERFAMILY SSF88946 97 206 1.18E-53 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SII_RS04175 1b9d6239a533a3e3427dfc79a09e4849 370 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 132 357 3.1E-38 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SII_RS04175 1b9d6239a533a3e3427dfc79a09e4849 370 SUPERFAMILY SSF88659 266 366 1.79E-28 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SII_RS04175 1b9d6239a533a3e3427dfc79a09e4849 370 PANTHER PTHR30603:SF0 5 369 5.1E-204 T 22-04-2016 SII_RS04175 1b9d6239a533a3e3427dfc79a09e4849 370 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 160 173 - T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SII_RS04175 1b9d6239a533a3e3427dfc79a09e4849 370 PANTHER PTHR30603 5 369 5.1E-204 T 22-04-2016 SII_RS04175 1b9d6239a533a3e3427dfc79a09e4849 370 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 132 368 3.4E-125 T 22-04-2016 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 SII_RS04175 1b9d6239a533a3e3427dfc79a09e4849 370 Pfam PF03979 Sigma-70 factor, region 1.1 14 87 3.1E-10 T 22-04-2016 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 SII_RS04175 1b9d6239a533a3e3427dfc79a09e4849 370 PRINTS PR00046 Major sigma-70 factor signature 184 192 1.4E-31 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SII_RS04175 1b9d6239a533a3e3427dfc79a09e4849 370 PRINTS PR00046 Major sigma-70 factor signature 160 173 1.4E-31 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SII_RS04175 1b9d6239a533a3e3427dfc79a09e4849 370 PRINTS PR00046 Major sigma-70 factor signature 344 355 1.4E-31 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SII_RS04175 1b9d6239a533a3e3427dfc79a09e4849 370 PRINTS PR00046 Major sigma-70 factor signature 308 320 1.4E-31 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SII_RS04175 1b9d6239a533a3e3427dfc79a09e4849 370 PRINTS PR00046 Major sigma-70 factor signature 329 344 1.4E-31 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SII_RS04175 1b9d6239a533a3e3427dfc79a09e4849 370 Pfam PF04542 Sigma-70 region 2 136 205 5.7E-23 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SII_RS04175 1b9d6239a533a3e3427dfc79a09e4849 370 Gene3D G3DSA:1.10.10.10 209 260 7.5E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SII_RS04175 1b9d6239a533a3e3427dfc79a09e4849 370 Pfam PF04545 Sigma-70, region 4 304 357 2.4E-19 T 22-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SII_RS04175 1b9d6239a533a3e3427dfc79a09e4849 370 Pfam PF04539 Sigma-70 region 3 215 291 1.7E-30 T 22-04-2016 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SII_RS04175 1b9d6239a533a3e3427dfc79a09e4849 370 Gene3D G3DSA:1.10.10.10 298 369 7.9E-34 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SII_RS04175 1b9d6239a533a3e3427dfc79a09e4849 370 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 329 355 - T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SII_RS04175 1b9d6239a533a3e3427dfc79a09e4849 370 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 2 369 33.38 T 22-04-2016 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 SII_RS04175 1b9d6239a533a3e3427dfc79a09e4849 370 SUPERFAMILY SSF88659 209 283 1.21E-21 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SII_RS04175 1b9d6239a533a3e3427dfc79a09e4849 370 Gene3D G3DSA:1.10.601.10 20 205 4.6E-73 T 22-04-2016 SII_RS04175 1b9d6239a533a3e3427dfc79a09e4849 370 Pfam PF00140 Sigma-70 factor, region 1.2 98 130 9.4E-15 T 22-04-2016 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SII_RS07930 1d611849fca417795d5cb4e12f717b93 148 Gene3D G3DSA:3.90.1180.10 5 143 3.2E-61 T 22-04-2016 IPR023564 Ribosomal protein L13 domain GO:0003735|GO:0005840|GO:0006412 SII_RS07930 1d611849fca417795d5cb4e12f717b93 148 Pfam PF00572 Ribosomal protein L13 16 140 3.5E-53 T 22-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 SII_RS07930 1d611849fca417795d5cb4e12f717b93 148 PANTHER PTHR11545 4 144 4.4E-69 T 22-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 SII_RS07930 1d611849fca417795d5cb4e12f717b93 148 ProSitePatterns PS00783 Ribosomal protein L13 signature. 107 129 - T 22-04-2016 IPR023563 Ribosomal protein L13, conserved site GO:0003735|GO:0005840|GO:0006412 SII_RS07930 1d611849fca417795d5cb4e12f717b93 148 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 17 143 26.05 T 22-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 SII_RS07930 1d611849fca417795d5cb4e12f717b93 148 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 6 144 4.6E-58 T 22-04-2016 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 SII_RS07930 1d611849fca417795d5cb4e12f717b93 148 PIRSF PIRSF002181 1 147 1.4E-46 T 22-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 SII_RS07930 1d611849fca417795d5cb4e12f717b93 148 SUPERFAMILY SSF52161 6 144 1.05E-56 T 22-04-2016 IPR023564 Ribosomal protein L13 domain GO:0003735|GO:0005840|GO:0006412 SII_RS08845 921b1346426b8b0de8cda1a331864436 252 Pfam PF01418 Helix-turn-helix domain, rpiR family 3 69 4.5E-14 T 22-04-2016 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 SII_RS08845 921b1346426b8b0de8cda1a331864436 252 SUPERFAMILY SSF46689 4 71 6.09E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SII_RS08845 921b1346426b8b0de8cda1a331864436 252 Gene3D G3DSA:3.40.50.10490 61 242 6.4E-25 T 22-04-2016 SII_RS08845 921b1346426b8b0de8cda1a331864436 252 PANTHER PTHR30514:SF1 2 252 2.8E-30 T 22-04-2016 SII_RS08845 921b1346426b8b0de8cda1a331864436 252 SUPERFAMILY SSF53697 91 244 2.91E-24 T 22-04-2016 SII_RS08845 921b1346426b8b0de8cda1a331864436 252 Pfam PF01380 SIS domain 116 216 9.1E-15 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 SII_RS08845 921b1346426b8b0de8cda1a331864436 252 PANTHER PTHR30514 2 252 2.8E-30 T 22-04-2016 SII_RS08845 921b1346426b8b0de8cda1a331864436 252 Gene3D G3DSA:1.10.10.10 2 60 5.1E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SII_RS04445 e415a7e421a335bcc66ec5c673cd28c9 448 Pfam PF00512 His Kinase A (phospho-acceptor) domain 222 287 5.8E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SII_RS04445 e415a7e421a335bcc66ec5c673cd28c9 448 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 331 438 8.2E-23 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SII_RS04445 e415a7e421a335bcc66ec5c673cd28c9 448 PRINTS PR00344 Bacterial sensor protein C-terminal signature 385 395 4.0E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SII_RS04445 e415a7e421a335bcc66ec5c673cd28c9 448 PRINTS PR00344 Bacterial sensor protein C-terminal signature 402 420 4.0E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SII_RS04445 e415a7e421a335bcc66ec5c673cd28c9 448 PRINTS PR00344 Bacterial sensor protein C-terminal signature 367 381 4.0E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SII_RS04445 e415a7e421a335bcc66ec5c673cd28c9 448 PRINTS PR00344 Bacterial sensor protein C-terminal signature 426 439 4.0E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SII_RS04445 e415a7e421a335bcc66ec5c673cd28c9 448 SMART SM00387 330 442 2.3E-35 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SII_RS04445 e415a7e421a335bcc66ec5c673cd28c9 448 Gene3D G3DSA:1.10.287.130 214 274 6.1E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SII_RS04445 e415a7e421a335bcc66ec5c673cd28c9 448 PANTHER PTHR24423 1 8 8.9E-73 T 22-04-2016 SII_RS04445 e415a7e421a335bcc66ec5c673cd28c9 448 PANTHER PTHR24423 218 445 8.9E-73 T 22-04-2016 SII_RS04445 e415a7e421a335bcc66ec5c673cd28c9 448 Gene3D G3DSA:3.30.565.10 275 444 3.9E-39 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SII_RS04445 e415a7e421a335bcc66ec5c673cd28c9 448 SMART SM00388 220 287 5.2E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SII_RS04445 e415a7e421a335bcc66ec5c673cd28c9 448 SUPERFAMILY SSF47384 211 286 4.32E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SII_RS04445 e415a7e421a335bcc66ec5c673cd28c9 448 PANTHER PTHR24423:SF546 1 8 8.9E-73 T 22-04-2016 SII_RS04445 e415a7e421a335bcc66ec5c673cd28c9 448 PANTHER PTHR24423:SF546 218 445 8.9E-73 T 22-04-2016 SII_RS04445 e415a7e421a335bcc66ec5c673cd28c9 448 SUPERFAMILY SSF55874 299 439 3.41E-35 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SII_RS02500 97ffb2b21ad5bd9513d15682e1d888b8 649 Pfam PF02378 Phosphotransferase system, EIIC 294 591 1.6E-24 T 22-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 SII_RS02500 97ffb2b21ad5bd9513d15682e1d888b8 649 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 6 148 3.2E-34 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SII_RS02500 97ffb2b21ad5bd9513d15682e1d888b8 649 PANTHER PTHR30505:SF0 43 378 2.7E-272 T 22-04-2016 SII_RS02500 97ffb2b21ad5bd9513d15682e1d888b8 649 PANTHER PTHR30505:SF0 396 635 2.7E-272 T 22-04-2016 SII_RS02500 97ffb2b21ad5bd9513d15682e1d888b8 649 Gene3D G3DSA:3.40.930.10 1 152 3.9E-51 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SII_RS02500 97ffb2b21ad5bd9513d15682e1d888b8 649 Gene3D G3DSA:3.40.50.2300 166 270 2.2E-42 T 22-04-2016 SII_RS02500 97ffb2b21ad5bd9513d15682e1d888b8 649 TIGRFAM TIGR00848 fruA: PTS system, fructose subfamily, IIA component 6 133 8.3E-43 T 22-04-2016 IPR004715 Phosphotransferase system, IIA component fructose subfamily GO:0008982|GO:0009401|GO:0016021 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SII_RS02500 97ffb2b21ad5bd9513d15682e1d888b8 649 SUPERFAMILY SSF55804 1 148 2.88E-42 T 22-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 SII_RS02500 97ffb2b21ad5bd9513d15682e1d888b8 649 PANTHER PTHR30505 43 378 2.7E-272 T 22-04-2016 SII_RS02500 97ffb2b21ad5bd9513d15682e1d888b8 649 PANTHER PTHR30505 396 635 2.7E-272 T 22-04-2016 SII_RS02500 97ffb2b21ad5bd9513d15682e1d888b8 649 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 170 251 1.7E-29 T 22-04-2016 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 SII_RS02500 97ffb2b21ad5bd9513d15682e1d888b8 649 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 171 260 1.6E-17 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 SII_RS02500 97ffb2b21ad5bd9513d15682e1d888b8 649 SUPERFAMILY SSF52794 169 269 2.79E-35 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 SII_RS02500 97ffb2b21ad5bd9513d15682e1d888b8 649 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 276 643 6.7E-116 T 22-04-2016 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 SII_RS00280 de0dfb4454a18700e99585ef5c4fb010 364 Gene3D G3DSA:3.30.1490.20 117 178 1.0E-18 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 SII_RS00280 de0dfb4454a18700e99585ef5c4fb010 364 PANTHER PTHR11609 1 357 6.3E-125 T 22-04-2016 SII_RS00280 de0dfb4454a18700e99585ef5c4fb010 364 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 6 355 5.4E-107 T 22-04-2016 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 SII_RS00280 de0dfb4454a18700e99585ef5c4fb010 364 SUPERFAMILY SSF52440 4 87 5.61E-25 T 22-04-2016 IPR016185 Pre-ATP-grasp domain SII_RS00280 de0dfb4454a18700e99585ef5c4fb010 364 Gene3D G3DSA:3.30.470.20 179 354 5.9E-60 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 SII_RS00280 de0dfb4454a18700e99585ef5c4fb010 364 SUPERFAMILY SSF56059 101 295 8.93E-55 T 22-04-2016 SII_RS00280 de0dfb4454a18700e99585ef5c4fb010 364 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 6 352 39.965 T 22-04-2016 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 SII_RS00280 de0dfb4454a18700e99585ef5c4fb010 364 PANTHER PTHR11609:SF5 1 357 6.3E-125 T 22-04-2016 SII_RS00280 de0dfb4454a18700e99585ef5c4fb010 364 Pfam PF02222 ATP-grasp domain 111 276 2.3E-47 T 22-04-2016 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type UniPathway: UPA00074 SII_RS00280 de0dfb4454a18700e99585ef5c4fb010 364 SUPERFAMILY SSF51246 301 356 3.3E-15 T 22-04-2016 IPR011054 Rudiment single hybrid motif SII_RS00280 de0dfb4454a18700e99585ef5c4fb010 364 Gene3D G3DSA:3.40.50.20 3 110 6.3E-34 T 22-04-2016 IPR016185 Pre-ATP-grasp domain SII_RS06920 c6c18eded450cfade7f0539fe1f4eb36 555 Pfam PF02734 DAK2 domain 34 198 2.5E-40 T 22-04-2016 IPR004007 DhaL domain GO:0004371|GO:0006071 SII_RS06920 c6c18eded450cfade7f0539fe1f4eb36 555 TIGRFAM TIGR03599 YloV: DAK2 domain fusion protein YloV 9 555 5.1E-215 T 22-04-2016 IPR019986 DAK2 domain-containing protein YloV SII_RS06920 c6c18eded450cfade7f0539fe1f4eb36 555 SUPERFAMILY SSF101473 4 200 1.15E-45 T 22-04-2016 IPR004007 DhaL domain GO:0004371|GO:0006071 SII_RS06920 c6c18eded450cfade7f0539fe1f4eb36 555 SMART SM01121 240 555 1.6E-194 T 22-04-2016 IPR033470 Uncharacterised protein, DhaK domain SII_RS06920 c6c18eded450cfade7f0539fe1f4eb36 555 PANTHER PTHR33434 1 555 3.5E-259 T 22-04-2016 SII_RS06920 c6c18eded450cfade7f0539fe1f4eb36 555 PANTHER PTHR33434:SF4 1 555 3.5E-259 T 22-04-2016 SII_RS06920 c6c18eded450cfade7f0539fe1f4eb36 555 SMART SM01120 34 199 6.0E-68 T 22-04-2016 IPR004007 DhaL domain GO:0004371|GO:0006071 SII_RS06920 c6c18eded450cfade7f0539fe1f4eb36 555 Pfam PF13684 Dihydroxyacetone kinase family 240 555 1.2E-127 T 22-04-2016 IPR033470 Uncharacterised protein, DhaK domain SII_RS07445 368921cca5066144ff81ddcdff06a762 320 PIRSF PIRSF500176 1 320 4.5E-93 T 22-04-2016 SII_RS07445 368921cca5066144ff81ddcdff06a762 320 PANTHER PTHR11707 4 319 1.2E-53 T 22-04-2016 SII_RS07445 368921cca5066144ff81ddcdff06a762 320 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 78 88 - T 22-04-2016 IPR027475 Asparaginase/glutaminase, active site 2 SII_RS07445 368921cca5066144ff81ddcdff06a762 320 PIRSF PIRSF001220 1 319 3.4E-91 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 SII_RS07445 368921cca5066144ff81ddcdff06a762 320 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 7 15 - T 22-04-2016 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 SII_RS07445 368921cca5066144ff81ddcdff06a762 320 SUPERFAMILY SSF53774 2 319 2.75E-94 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 SII_RS07445 368921cca5066144ff81ddcdff06a762 320 Gene3D G3DSA:3.40.50.40 204 319 7.5E-29 T 22-04-2016 IPR027473 L-asparaginase, C-terminal domain SII_RS07445 368921cca5066144ff81ddcdff06a762 320 Gene3D G3DSA:3.40.50.1170 2 194 9.7E-61 T 22-04-2016 IPR027474 L-asparaginase, N-terminal SII_RS07445 368921cca5066144ff81ddcdff06a762 320 Pfam PF00710 Asparaginase, N-terminal 4 188 3.0E-56 T 22-04-2016 IPR027474 L-asparaginase, N-terminal SII_RS07445 368921cca5066144ff81ddcdff06a762 320 PRINTS PR00139 Asparaginase/glutaminase family signature 5 16 3.5E-15 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 SII_RS07445 368921cca5066144ff81ddcdff06a762 320 PRINTS PR00139 Asparaginase/glutaminase family signature 77 95 3.5E-15 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 SII_RS07445 368921cca5066144ff81ddcdff06a762 320 PRINTS PR00139 Asparaginase/glutaminase family signature 250 268 3.5E-15 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 SII_RS07445 368921cca5066144ff81ddcdff06a762 320 SMART SM00870 4 315 3.2E-129 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 SII_RS00305 15ea020a149249bc350ffffc77c16a01 328 PANTHER PTHR28629:SF2 1 328 5.2E-104 T 22-04-2016 SII_RS00305 15ea020a149249bc350ffffc77c16a01 328 TIGRFAM TIGR02362 dhaK1b: probable dihydroxyacetone kinase DhaK1b subunit 4 328 1.1E-158 T 22-04-2016 IPR012735 Dihydroxyacetone kinase DhaK, subunit 1b SII_RS00305 15ea020a149249bc350ffffc77c16a01 328 Pfam PF02733 Dak1 domain 19 325 2.4E-89 T 22-04-2016 IPR004006 DhaK domain GO:0004371|GO:0006071 SII_RS00305 15ea020a149249bc350ffffc77c16a01 328 Gene3D G3DSA:3.40.50.10440 12 178 5.6E-58 T 22-04-2016 SII_RS00305 15ea020a149249bc350ffffc77c16a01 328 PANTHER PTHR28629 1 328 5.2E-104 T 22-04-2016 SII_RS00305 15ea020a149249bc350ffffc77c16a01 328 SUPERFAMILY SSF82549 12 328 2.35E-100 T 22-04-2016 SII_RS00305 15ea020a149249bc350ffffc77c16a01 328 Gene3D G3DSA:3.30.1180.20 183 328 1.1E-42 T 22-04-2016 SII_RS00780 3942115fec0b12932cd79367fa5402cf 345 Pfam PF13083 KH domain 202 271 1.4E-16 T 22-04-2016 SII_RS00780 3942115fec0b12932cd79367fa5402cf 345 SUPERFAMILY SSF82708 285 340 1.12E-9 T 22-04-2016 IPR001374 R3H domain GO:0003676 SII_RS00780 3942115fec0b12932cd79367fa5402cf 345 Gene3D G3DSA:3.30.30.80 1 52 1.7E-16 T 22-04-2016 IPR032782 Jag, N-terminal SII_RS00780 3942115fec0b12932cd79367fa5402cf 345 SMART SM01245 3 55 1.3E-20 T 22-04-2016 IPR032782 Jag, N-terminal SII_RS00780 3942115fec0b12932cd79367fa5402cf 345 SMART SM00393 264 343 3.1E-9 T 22-04-2016 IPR001374 R3H domain GO:0003676 SII_RS00780 3942115fec0b12932cd79367fa5402cf 345 Pfam PF01424 R3H domain 283 340 1.1E-15 T 22-04-2016 IPR001374 R3H domain GO:0003676 SII_RS00780 3942115fec0b12932cd79367fa5402cf 345 PANTHER PTHR35800 1 54 7.1E-56 T 22-04-2016 SII_RS00780 3942115fec0b12932cd79367fa5402cf 345 PANTHER PTHR35800 193 345 7.1E-56 T 22-04-2016 SII_RS00780 3942115fec0b12932cd79367fa5402cf 345 Pfam PF14804 Jag N-terminus 4 53 6.2E-18 T 22-04-2016 IPR032782 Jag, N-terminal SII_RS00780 3942115fec0b12932cd79367fa5402cf 345 Gene3D G3DSA:3.30.1370.50 275 343 1.1E-23 T 22-04-2016 IPR001374 R3H domain GO:0003676 SII_RS00780 3942115fec0b12932cd79367fa5402cf 345 Gene3D G3DSA:3.30.300.120 200 273 3.3E-17 T 22-04-2016 SII_RS04400 388a307cf6a09d654c30909ff1fed729 351 PANTHER PTHR34296 4 351 1.5E-130 T 22-04-2016 SII_RS04400 388a307cf6a09d654c30909ff1fed729 351 Gene3D G3DSA:3.40.50.2300 35 161 3.0E-48 T 22-04-2016 SII_RS04400 388a307cf6a09d654c30909ff1fed729 351 Pfam PF02608 Basic membrane protein 41 350 7.9E-70 T 22-04-2016 IPR003760 Basic membrane lipoprotein GO:0005886 SII_RS04400 388a307cf6a09d654c30909ff1fed729 351 Gene3D G3DSA:3.40.50.2300 162 322 3.0E-51 T 22-04-2016 SII_RS04400 388a307cf6a09d654c30909ff1fed729 351 PANTHER PTHR34296:SF2 4 351 1.5E-130 T 22-04-2016 SII_RS04400 388a307cf6a09d654c30909ff1fed729 351 SUPERFAMILY SSF53822 52 265 1.23E-13 T 22-04-2016 IPR028082 Periplasmic binding protein-like I SII_RS00800 5ccbfdb1ea4a61bd24e7dcd9a9c3e6bb 258 PANTHER PTHR10060:SF20 1 257 2.4E-115 T 22-04-2016 SII_RS00800 5ccbfdb1ea4a61bd24e7dcd9a9c3e6bb 258 Gene3D G3DSA:3.20.20.140 1 256 2.2E-90 T 22-04-2016 SII_RS00800 5ccbfdb1ea4a61bd24e7dcd9a9c3e6bb 258 PANTHER PTHR10060 1 257 2.4E-115 T 22-04-2016 IPR001130 TatD family GO:0016788 SII_RS00800 5ccbfdb1ea4a61bd24e7dcd9a9c3e6bb 258 PIRSF PIRSF005902 1 258 1.8E-80 T 22-04-2016 IPR001130 TatD family GO:0016788 SII_RS00800 5ccbfdb1ea4a61bd24e7dcd9a9c3e6bb 258 SUPERFAMILY SSF51556 3 255 7.4E-86 T 22-04-2016 IPR032466 Metal-dependent hydrolase SII_RS00800 5ccbfdb1ea4a61bd24e7dcd9a9c3e6bb 258 Pfam PF01026 TatD related DNase 4 254 5.0E-75 T 22-04-2016 IPR001130 TatD family GO:0016788 SII_RS00800 5ccbfdb1ea4a61bd24e7dcd9a9c3e6bb 258 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 3 11 - T 22-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 SII_RS00800 5ccbfdb1ea4a61bd24e7dcd9a9c3e6bb 258 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 190 206 - T 22-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 SII_RS00800 5ccbfdb1ea4a61bd24e7dcd9a9c3e6bb 258 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 3 254 6.2E-79 T 22-04-2016 IPR015991 Uncharacterised deoxyribonuclease TatD-type GO:0004536 SII_RS03900 552b1c1d702450e8e4f8406bc667823e 58 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 22.32 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 SII_RS03900 552b1c1d702450e8e4f8406bc667823e 58 ProSitePatterns PS01181 Ribosomal protein S21 signature. 13 25 - T 22-04-2016 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SII_RS03900 552b1c1d702450e8e4f8406bc667823e 58 Pfam PF01165 Ribosomal protein S21 5 56 3.3E-21 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 SII_RS03900 552b1c1d702450e8e4f8406bc667823e 58 PANTHER PTHR21109 1 56 2.6E-22 T 22-04-2016 SII_RS03900 552b1c1d702450e8e4f8406bc667823e 58 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 16 43 6.0E-9 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 SII_RS03900 552b1c1d702450e8e4f8406bc667823e 58 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 1.08E-15 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 SII_RS03900 552b1c1d702450e8e4f8406bc667823e 58 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 1.08E-15 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 SII_RS03900 552b1c1d702450e8e4f8406bc667823e 58 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 1.08E-15 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 SII_RS03900 552b1c1d702450e8e4f8406bc667823e 58 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 1.08E-15 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 SII_RS03900 552b1c1d702450e8e4f8406bc667823e 58 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 3 56 7.7E-22 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 SII_RS06745 938814ebbcce677a5c9243b223227c2b 188 SUPERFAMILY SSF52833 1 187 2.88E-51 T 22-04-2016 IPR012336 Thioredoxin-like fold SII_RS06745 938814ebbcce677a5c9243b223227c2b 188 Gene3D G3DSA:3.40.30.10 3 184 3.7E-54 T 22-04-2016 IPR012336 Thioredoxin-like fold SII_RS06745 938814ebbcce677a5c9243b223227c2b 188 TIGRFAM TIGR03137 AhpC: peroxiredoxin 1 188 7.7E-96 T 22-04-2016 IPR017559 Alkyl hydroperoxide reductase subunit C GO:0006979|GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 SII_RS06745 938814ebbcce677a5c9243b223227c2b 188 PANTHER PTHR10681:SF121 1 188 2.8E-85 T 22-04-2016 SII_RS06745 938814ebbcce677a5c9243b223227c2b 188 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 157 182 9.3E-5 T 22-04-2016 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 SII_RS06745 938814ebbcce677a5c9243b223227c2b 188 PIRSF PIRSF000239 1 188 2.8E-47 T 22-04-2016 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15 SII_RS06745 938814ebbcce677a5c9243b223227c2b 188 PANTHER PTHR10681 1 188 2.8E-85 T 22-04-2016 SII_RS06745 938814ebbcce677a5c9243b223227c2b 188 Pfam PF00578 AhpC/TSA family 4 134 9.8E-31 T 22-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 SII_RS03755 35fdc687f4d3dfe5301a38ef8a3f137f 156 PANTHER PTHR22769:SF39 3 141 9.2E-54 T 22-04-2016 SII_RS03755 35fdc687f4d3dfe5301a38ef8a3f137f 156 PRINTS PR00502 NUDIX hydrolase family signature 47 62 7.1E-6 T 22-04-2016 IPR020476 NUDIX hydrolase SII_RS03755 35fdc687f4d3dfe5301a38ef8a3f137f 156 PRINTS PR00502 NUDIX hydrolase family signature 33 47 7.1E-6 T 22-04-2016 IPR020476 NUDIX hydrolase SII_RS03755 35fdc687f4d3dfe5301a38ef8a3f137f 156 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 SII_RS03755 35fdc687f4d3dfe5301a38ef8a3f137f 156 Gene3D G3DSA:3.90.79.10 3 154 5.2E-39 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SII_RS03755 35fdc687f4d3dfe5301a38ef8a3f137f 156 PRINTS PR01402 Mutator MutX protein signature 135 155 3.0E-62 T 22-04-2016 IPR003562 Mutator MutX protein GO:0006281|GO:0008413 MetaCyc: PWY-6502 SII_RS03755 35fdc687f4d3dfe5301a38ef8a3f137f 156 PRINTS PR01402 Mutator MutX protein signature 22 37 3.0E-62 T 22-04-2016 IPR003562 Mutator MutX protein GO:0006281|GO:0008413 MetaCyc: PWY-6502 SII_RS03755 35fdc687f4d3dfe5301a38ef8a3f137f 156 PRINTS PR01402 Mutator MutX protein signature 118 135 3.0E-62 T 22-04-2016 IPR003562 Mutator MutX protein GO:0006281|GO:0008413 MetaCyc: PWY-6502 SII_RS03755 35fdc687f4d3dfe5301a38ef8a3f137f 156 PRINTS PR01402 Mutator MutX protein signature 98 118 3.0E-62 T 22-04-2016 IPR003562 Mutator MutX protein GO:0006281|GO:0008413 MetaCyc: PWY-6502 SII_RS03755 35fdc687f4d3dfe5301a38ef8a3f137f 156 PRINTS PR01402 Mutator MutX protein signature 4 22 3.0E-62 T 22-04-2016 IPR003562 Mutator MutX protein GO:0006281|GO:0008413 MetaCyc: PWY-6502 SII_RS03755 35fdc687f4d3dfe5301a38ef8a3f137f 156 PRINTS PR01402 Mutator MutX protein signature 68 94 3.0E-62 T 22-04-2016 IPR003562 Mutator MutX protein GO:0006281|GO:0008413 MetaCyc: PWY-6502 SII_RS03755 35fdc687f4d3dfe5301a38ef8a3f137f 156 SUPERFAMILY SSF55811 4 143 5.96E-29 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SII_RS03755 35fdc687f4d3dfe5301a38ef8a3f137f 156 PANTHER PTHR22769 3 141 9.2E-54 T 22-04-2016 SII_RS03755 35fdc687f4d3dfe5301a38ef8a3f137f 156 Pfam PF00293 NUDIX domain 5 127 2.6E-21 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 SII_RS06420 18fc875346cabd95595c8eeead546aca 548 Pfam PF01293 Phosphoenolpyruvate carboxykinase 102 474 6.0E-20 T 22-04-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 SII_RS06420 18fc875346cabd95595c8eeead546aca 548 SUPERFAMILY SSF53795 233 528 5.49E-67 T 22-04-2016 SII_RS06420 18fc875346cabd95595c8eeead546aca 548 SUPERFAMILY SSF68923 55 231 1.55E-31 T 22-04-2016 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 SII_RS06420 18fc875346cabd95595c8eeead546aca 548 Gene3D G3DSA:3.40.449.10 109 223 8.1E-4 T 22-04-2016 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 SII_RS06420 18fc875346cabd95595c8eeead546aca 548 Gene3D G3DSA:3.90.228.20 364 495 1.3E-22 T 22-04-2016 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 SII_RS06420 18fc875346cabd95595c8eeead546aca 548 Gene3D G3DSA:3.90.228.20 235 307 1.3E-22 T 22-04-2016 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 SII_RS09070 97cfb3702a496974a80ca2d0290db322 753 PIRSF PIRSF000460 1 753 3.5E-203 T 22-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 SII_RS09070 97cfb3702a496974a80ca2d0290db322 753 SUPERFAMILY SSF53756 3 751 2.04E-253 T 22-04-2016 SII_RS09070 97cfb3702a496974a80ca2d0290db322 753 TIGRFAM TIGR02093 P_ylase: glycogen/starch/alpha-glucan phosphorylases 3 751 7.6E-284 T 22-04-2016 IPR011833 Glycogen/starch/alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 SII_RS09070 97cfb3702a496974a80ca2d0290db322 753 PANTHER PTHR11468:SF3 38 751 0.0 T 22-04-2016 SII_RS09070 97cfb3702a496974a80ca2d0290db322 753 Pfam PF00343 Carbohydrate phosphorylase 79 751 1.5E-260 T 22-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 SII_RS09070 97cfb3702a496974a80ca2d0290db322 753 PANTHER PTHR11468 38 751 0.0 T 22-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 SII_RS09070 97cfb3702a496974a80ca2d0290db322 753 Gene3D G3DSA:3.40.50.2000 422 736 4.9E-115 T 22-04-2016 SII_RS09070 97cfb3702a496974a80ca2d0290db322 753 ProSitePatterns PS00102 Phosphorylase pyridoxal-phosphate attachment site. 595 607 - T 22-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 SII_RS09070 97cfb3702a496974a80ca2d0290db322 753 Gene3D G3DSA:3.40.50.2000 3 421 1.0E-140 T 22-04-2016 SII_RS02400 eeae9439637bdecc8f8d0d31853fbbd9 468 SUPERFAMILY SSF50615 2 79 4.12E-24 T 22-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SII_RS02400 eeae9439637bdecc8f8d0d31853fbbd9 468 SUPERFAMILY SSF47917 351 466 1.26E-49 T 22-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SII_RS02400 eeae9439637bdecc8f8d0d31853fbbd9 468 Hamap MF_01347 ATP synthase subunit beta [atpB]. 1 466 57.121 T 22-04-2016 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SII_RS02400 eeae9439637bdecc8f8d0d31853fbbd9 468 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 6 77 5.0E-23 T 22-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SII_RS02400 eeae9439637bdecc8f8d0d31853fbbd9 468 SUPERFAMILY SSF52540 81 351 1.47E-88 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS02400 eeae9439637bdecc8f8d0d31853fbbd9 468 PANTHER PTHR15184:SF8 1 466 0.0 T 22-04-2016 SII_RS02400 eeae9439637bdecc8f8d0d31853fbbd9 468 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 135 348 2.6E-67 T 22-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SII_RS02400 eeae9439637bdecc8f8d0d31853fbbd9 468 Gene3D G3DSA:2.40.10.170 2 79 1.3E-31 T 22-04-2016 SII_RS02400 eeae9439637bdecc8f8d0d31853fbbd9 468 PANTHER PTHR15184 1 466 0.0 T 22-04-2016 SII_RS02400 eeae9439637bdecc8f8d0d31853fbbd9 468 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 339 348 - T 22-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SII_RS02400 eeae9439637bdecc8f8d0d31853fbbd9 468 SMART SM00382 147 332 2.0E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain SII_RS02400 eeae9439637bdecc8f8d0d31853fbbd9 468 Gene3D G3DSA:3.40.50.300 80 349 3.8E-108 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS02400 eeae9439637bdecc8f8d0d31853fbbd9 468 Gene3D G3DSA:1.10.1140.10 352 466 1.2E-50 T 22-04-2016 IPR024034 ATPase, F1 complex beta subunit/V1 complex, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SII_RS02400 eeae9439637bdecc8f8d0d31853fbbd9 468 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 3 466 3.9E-253 T 22-04-2016 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SII_RS00410 ae7c6efa6e59f8baa5cc8a2046634a22 460 Pfam PF16569 Gram-positive pilin backbone subunit 2, Cna-B-like domain 189 293 7.9E-15 T 22-04-2016 IPR032334 Gram-positive pilin backbone subunit 2, Cna-B-like domain SII_RS00410 ae7c6efa6e59f8baa5cc8a2046634a22 460 TIGRFAM TIGR04226 RrgB_K2N_iso_D2: fimbrial isopeptide formation D2 domain 165 293 1.1E-18 T 22-04-2016 IPR026466 Fimbrial isopeptide formation D2 domain SII_RS00410 ae7c6efa6e59f8baa5cc8a2046634a22 460 TIGRFAM TIGR01167 LPXTG_anchor: LPXTG cell wall anchor domain 424 457 1.9E-5 T 22-04-2016 IPR019931 LPXTG cell wall anchor domain SII_RS01005 0365425ccbf38b8ab4d8a306be5dfb2e 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 4.8E-66 T 22-04-2016 IPR023798 Ribosomal protein S7 domain SII_RS01005 0365425ccbf38b8ab4d8a306be5dfb2e 156 Gene3D G3DSA:1.10.455.10 7 156 1.2E-65 T 22-04-2016 IPR023798 Ribosomal protein S7 domain SII_RS01005 0365425ccbf38b8ab4d8a306be5dfb2e 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 156 3.6E-69 T 22-04-2016 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 SII_RS01005 0365425ccbf38b8ab4d8a306be5dfb2e 156 SUPERFAMILY SSF47973 1 149 4.58E-60 T 22-04-2016 IPR023798 Ribosomal protein S7 domain SII_RS01005 0365425ccbf38b8ab4d8a306be5dfb2e 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 22-04-2016 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 SII_RS01005 0365425ccbf38b8ab4d8a306be5dfb2e 156 PANTHER PTHR11205 1 156 1.1E-89 T 22-04-2016 IPR000235 Ribosomal protein S5/S7 GO:0006412 SII_RS01005 0365425ccbf38b8ab4d8a306be5dfb2e 156 PIRSF PIRSF002122 2 156 4.5E-55 T 22-04-2016 IPR000235 Ribosomal protein S5/S7 GO:0006412 SII_RS01005 0365425ccbf38b8ab4d8a306be5dfb2e 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 35.508 T 22-04-2016 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 SII_RS09420 42bc82a888bdeb99c61581ef44de7e0a 214 PANTHER PTHR18901:SF23 1 210 2.0E-63 T 22-04-2016 SII_RS09420 42bc82a888bdeb99c61581ef44de7e0a 214 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 181 4.0E-34 T 22-04-2016 IPR023214 HAD-like domain SII_RS09420 42bc82a888bdeb99c61581ef44de7e0a 214 Gene3D G3DSA:3.40.50.1000 75 210 5.3E-37 T 22-04-2016 IPR023214 HAD-like domain SII_RS09420 42bc82a888bdeb99c61581ef44de7e0a 214 PANTHER PTHR18901 1 210 2.0E-63 T 22-04-2016 SII_RS09420 42bc82a888bdeb99c61581ef44de7e0a 214 SUPERFAMILY SSF56784 2 210 5.74E-47 T 22-04-2016 IPR023214 HAD-like domain SII_RS09420 42bc82a888bdeb99c61581ef44de7e0a 214 Gene3D G3DSA:1.10.150.240 18 74 8.0E-22 T 22-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 SII_RS03875 d502e42f6bca60067743e6e5ef1cc2bf 580 PANTHER PTHR24221:SF202 1 580 6.3E-204 T 22-04-2016 SII_RS03875 d502e42f6bca60067743e6e5ef1cc2bf 580 Gene3D G3DSA:1.20.1560.10 5 318 1.2E-67 T 22-04-2016 SII_RS03875 d502e42f6bca60067743e6e5ef1cc2bf 580 SUPERFAMILY SSF90123 5 317 6.8E-71 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SII_RS03875 d502e42f6bca60067743e6e5ef1cc2bf 580 Gene3D G3DSA:3.40.50.300 343 564 1.5E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS03875 d502e42f6bca60067743e6e5ef1cc2bf 580 SUPERFAMILY SSF52540 329 570 9.61E-82 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS03875 d502e42f6bca60067743e6e5ef1cc2bf 580 SMART SM00382 360 546 5.7E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain SII_RS03875 d502e42f6bca60067743e6e5ef1cc2bf 580 ProSitePatterns PS00211 ABC transporters family signature. 472 486 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SII_RS03875 d502e42f6bca60067743e6e5ef1cc2bf 580 Pfam PF00005 ABC transporter 351 498 2.9E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SII_RS03875 d502e42f6bca60067743e6e5ef1cc2bf 580 PANTHER PTHR24221 1 580 6.3E-204 T 22-04-2016 SII_RS03875 d502e42f6bca60067743e6e5ef1cc2bf 580 Pfam PF00664 ABC transporter transmembrane region 21 291 6.5E-39 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SII_RS04370 21a2f9fdf1edd56176b97b220e14ec0d 241 PANTHER PTHR30283 2 240 1.7E-62 T 22-04-2016 SII_RS04370 21a2f9fdf1edd56176b97b220e14ec0d 241 PANTHER PTHR30283:SF3 2 240 1.7E-62 T 22-04-2016 SII_RS04370 21a2f9fdf1edd56176b97b220e14ec0d 241 Hamap MF_00652 UPF0246 protein YaaA [yaaA]. 1 241 28.924 T 22-04-2016 IPR005583 Peroxide stress protein YaaA SII_RS04370 21a2f9fdf1edd56176b97b220e14ec0d 241 Pfam PF03883 Protein of unknown function (DUF328) 1 229 1.7E-55 T 22-04-2016 IPR005583 Peroxide stress protein YaaA SII_RS05790 98743dd448a743a4a844964995b1f389 343 PANTHER PTHR41265:SF1 1 330 5.7E-63 T 22-04-2016 SII_RS05790 98743dd448a743a4a844964995b1f389 343 Pfam PF06054 Competence protein CoiA-like family 23 248 1.6E-40 T 22-04-2016 IPR010330 Competence-induced protein CoiA-like SII_RS05790 98743dd448a743a4a844964995b1f389 343 PIRSF PIRSF007487 1 318 4.2E-96 T 22-04-2016 IPR021176 Competence-induced protein CoiA-like, bacterial SII_RS05790 98743dd448a743a4a844964995b1f389 343 PANTHER PTHR41265 1 330 5.7E-63 T 22-04-2016 SII_RS09350 845df9744cac22dfb4b52e9b9dd04d65 257 Gene3D G3DSA:3.40.50.1000 6 73 1.2E-44 T 22-04-2016 IPR023214 HAD-like domain SII_RS09350 845df9744cac22dfb4b52e9b9dd04d65 257 Gene3D G3DSA:3.40.50.1000 161 256 1.2E-44 T 22-04-2016 IPR023214 HAD-like domain SII_RS09350 845df9744cac22dfb4b52e9b9dd04d65 257 ProSitePatterns PS01228 Hypothetical cof family signature 1. 6 17 - T 22-04-2016 IPR000150 Cof protein GO:0016787 SII_RS09350 845df9744cac22dfb4b52e9b9dd04d65 257 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 7 224 1.8E-21 T 22-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 SII_RS09350 845df9744cac22dfb4b52e9b9dd04d65 257 PANTHER PTHR10000:SF25 7 257 1.0E-56 T 22-04-2016 SII_RS09350 845df9744cac22dfb4b52e9b9dd04d65 257 ProSitePatterns PS01229 Hypothetical cof family signature 2. 205 227 - T 22-04-2016 SII_RS09350 845df9744cac22dfb4b52e9b9dd04d65 257 SUPERFAMILY SSF56784 6 255 5.84E-57 T 22-04-2016 IPR023214 HAD-like domain SII_RS09350 845df9744cac22dfb4b52e9b9dd04d65 257 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 7 251 7.8E-54 T 22-04-2016 IPR000150 Cof protein GO:0016787 SII_RS09350 845df9744cac22dfb4b52e9b9dd04d65 257 Pfam PF08282 haloacid dehalogenase-like hydrolase 7 251 1.0E-54 T 22-04-2016 IPR023214 HAD-like domain SII_RS09350 845df9744cac22dfb4b52e9b9dd04d65 257 PANTHER PTHR10000 7 257 1.0E-56 T 22-04-2016 SII_RS00550 cad1bd3e19733c039758a6b560fb0b96 207 PANTHER PTHR11671:SF2 1 207 3.1E-67 T 22-04-2016 SII_RS00550 cad1bd3e19733c039758a6b560fb0b96 207 TIGRFAM TIGR00309 V_ATPase_subD: V-type ATPase, D subunit 5 207 9.5E-46 T 22-04-2016 IPR002699 ATPase, V1 complex, subunit D GO:0042626 SII_RS00550 cad1bd3e19733c039758a6b560fb0b96 207 PANTHER PTHR11671 1 207 3.1E-67 T 22-04-2016 IPR002699 ATPase, V1 complex, subunit D GO:0042626 SII_RS00550 cad1bd3e19733c039758a6b560fb0b96 207 Pfam PF01813 ATP synthase subunit D 12 207 2.0E-52 T 22-04-2016 IPR002699 ATPase, V1 complex, subunit D GO:0042626 SII_RS00550 cad1bd3e19733c039758a6b560fb0b96 207 Hamap MF_00271 V-type ATP synthase subunit D [atpD]. 3 207 18.971 T 22-04-2016 IPR002699 ATPase, V1 complex, subunit D GO:0042626 SII_RS03750 ca37e4528a4871568cf8cf74fd988852 217 SMART SM00986 47 205 2.9E-34 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like SII_RS03750 ca37e4528a4871568cf8cf74fd988852 217 SMART SM00987 47 205 2.9E-34 T 22-04-2016 SII_RS03750 ca37e4528a4871568cf8cf74fd988852 217 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 55 64 - T 22-04-2016 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 SII_RS03750 ca37e4528a4871568cf8cf74fd988852 217 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 3 216 38.687 T 22-04-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 SII_RS03750 ca37e4528a4871568cf8cf74fd988852 217 SUPERFAMILY SSF52141 3 215 1.07E-85 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like SII_RS03750 ca37e4528a4871568cf8cf74fd988852 217 Gene3D G3DSA:3.40.470.10 3 216 2.8E-90 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like SII_RS03750 ca37e4528a4871568cf8cf74fd988852 217 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 4 208 3.5E-76 T 22-04-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 SII_RS03750 ca37e4528a4871568cf8cf74fd988852 217 PANTHER PTHR11264 6 215 8.2E-115 T 22-04-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 SII_RS03750 ca37e4528a4871568cf8cf74fd988852 217 Pfam PF03167 Uracil DNA glycosylase superfamily 53 204 4.0E-22 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like SII_RS03530 3762a5ab8e957df5bf9c683ee1f897c8 333 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SII_RS03530 3762a5ab8e957df5bf9c683ee1f897c8 333 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 2.3E-17 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SII_RS03530 3762a5ab8e957df5bf9c683ee1f897c8 333 Gene3D G3DSA:3.40.50.2300 164 332 2.7E-44 T 22-04-2016 SII_RS03530 3762a5ab8e957df5bf9c683ee1f897c8 333 SMART SM00354 1 72 1.9E-14 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SII_RS03530 3762a5ab8e957df5bf9c683ee1f897c8 333 Gene3D G3DSA:1.10.260.40 1 48 2.2E-20 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SII_RS03530 3762a5ab8e957df5bf9c683ee1f897c8 333 Gene3D G3DSA:3.40.50.2300 111 163 8.5E-6 T 22-04-2016 SII_RS03530 3762a5ab8e957df5bf9c683ee1f897c8 333 SUPERFAMILY SSF47413 3 48 1.03E-12 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SII_RS03530 3762a5ab8e957df5bf9c683ee1f897c8 333 SUPERFAMILY SSF53822 59 315 4.93E-46 T 22-04-2016 IPR028082 Periplasmic binding protein-like I SII_RS03530 3762a5ab8e957df5bf9c683ee1f897c8 333 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 3.2E-6 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SII_RS03530 3762a5ab8e957df5bf9c683ee1f897c8 333 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 3.2E-6 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SII_RS03530 3762a5ab8e957df5bf9c683ee1f897c8 333 PANTHER PTHR30146:SF28 1 333 1.0E-114 T 22-04-2016 SII_RS03530 3762a5ab8e957df5bf9c683ee1f897c8 333 Pfam PF13377 Periplasmic binding protein-like domain 165 332 1.2E-33 T 22-04-2016 SII_RS03530 3762a5ab8e957df5bf9c683ee1f897c8 333 PANTHER PTHR30146 1 333 1.0E-114 T 22-04-2016 SII_RS03665 0d5918637b1bd0a6aad3f4e14c8a217d 578 ProSitePatterns PS00211 ABC transporters family signature. 477 491 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SII_RS03665 0d5918637b1bd0a6aad3f4e14c8a217d 578 SUPERFAMILY SSF52540 333 575 3.41E-82 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS03665 0d5918637b1bd0a6aad3f4e14c8a217d 578 Pfam PF00664 ABC transporter transmembrane region 19 294 4.2E-35 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SII_RS03665 0d5918637b1bd0a6aad3f4e14c8a217d 578 SMART SM00382 365 558 1.0E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain SII_RS03665 0d5918637b1bd0a6aad3f4e14c8a217d 578 Gene3D G3DSA:1.20.1560.10 6 328 1.9E-59 T 22-04-2016 SII_RS03665 0d5918637b1bd0a6aad3f4e14c8a217d 578 Gene3D G3DSA:3.40.50.300 340 571 5.3E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS03665 0d5918637b1bd0a6aad3f4e14c8a217d 578 SUPERFAMILY SSF90123 6 326 5.1E-58 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SII_RS03665 0d5918637b1bd0a6aad3f4e14c8a217d 578 Pfam PF00005 ABC transporter 356 505 5.1E-33 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SII_RS03665 0d5918637b1bd0a6aad3f4e14c8a217d 578 PANTHER PTHR24221 1 577 1.8E-167 T 22-04-2016 SII_RS07990 afadd2a3dfe24b85e736527c46a6f565 89 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 22-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SII_RS07990 afadd2a3dfe24b85e736527c46a6f565 89 SMART SM01387 8 88 4.6E-46 T 22-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SII_RS07990 afadd2a3dfe24b85e736527c46a6f565 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 5 89 4.2E-37 T 22-04-2016 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 SII_RS07990 afadd2a3dfe24b85e736527c46a6f565 89 SUPERFAMILY SSF47060 3 89 1.62E-34 T 22-04-2016 IPR009068 S15/NS1, RNA-binding Reactome: REACT_71 SII_RS07990 afadd2a3dfe24b85e736527c46a6f565 89 PANTHER PTHR23321 1 89 4.4E-43 T 22-04-2016 SII_RS07990 afadd2a3dfe24b85e736527c46a6f565 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 10 88 4.0E-40 T 22-04-2016 SII_RS07990 afadd2a3dfe24b85e736527c46a6f565 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 22.075 T 22-04-2016 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 SII_RS07990 afadd2a3dfe24b85e736527c46a6f565 89 Pfam PF00312 Ribosomal protein S15 8 88 3.6E-34 T 22-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SII_RS07990 afadd2a3dfe24b85e736527c46a6f565 89 Gene3D G3DSA:1.10.287.10 3 89 1.0E-38 T 22-04-2016 IPR009068 S15/NS1, RNA-binding Reactome: REACT_71 SII_RS06770 48e5fa98160278d4fb90f355c15aa5c4 200 SUPERFAMILY SSF52980 29 192 9.92E-65 T 22-04-2016 IPR011335 Restriction endonuclease type II-like SII_RS06770 48e5fa98160278d4fb90f355c15aa5c4 200 Hamap MF_00130 Holliday junction resolvase RecU [recU]. 1 200 95.478 T 22-04-2016 IPR004612 Holliday junction resolvase RecU GO:0005737|GO:0006281|GO:0006310 SII_RS06770 48e5fa98160278d4fb90f355c15aa5c4 200 TIGRFAM TIGR00648 recU: recombination protein U 26 191 6.7E-63 T 22-04-2016 IPR004612 Holliday junction resolvase RecU GO:0005737|GO:0006281|GO:0006310 SII_RS06770 48e5fa98160278d4fb90f355c15aa5c4 200 Gene3D G3DSA:3.40.1350.10 28 193 4.7E-74 T 22-04-2016 IPR011856 tRNA endonuclease-like domain GO:0003676|GO:0004518 SII_RS06770 48e5fa98160278d4fb90f355c15aa5c4 200 PANTHER PTHR41275 1 200 9.1E-91 T 22-04-2016 SII_RS06770 48e5fa98160278d4fb90f355c15aa5c4 200 Pfam PF03838 Recombination protein U 27 190 5.4E-65 T 22-04-2016 IPR004612 Holliday junction resolvase RecU GO:0005737|GO:0006281|GO:0006310 SII_RS06770 48e5fa98160278d4fb90f355c15aa5c4 200 PIRSF PIRSF037785 18 200 1.3E-78 T 22-04-2016 IPR004612 Holliday junction resolvase RecU GO:0005737|GO:0006281|GO:0006310 SII_RS00310 3aa76568db27d76ede991843b02936bb 178 SUPERFAMILY SSF46689 6 64 1.1E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SII_RS00310 3aa76568db27d76ede991843b02936bb 178 Gene3D G3DSA:1.10.357.10 7 172 1.4E-14 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 SII_RS00310 3aa76568db27d76ede991843b02936bb 178 PANTHER PTHR30055 7 64 1.0E-14 T 22-04-2016 SII_RS00310 3aa76568db27d76ede991843b02936bb 178 PANTHER PTHR30055:SF55 7 64 1.0E-14 T 22-04-2016 SII_RS00310 3aa76568db27d76ede991843b02936bb 178 TIGRFAM TIGR02366 DHAK_reg: probable dihydroxyacetone kinase regulator 4 176 7.8E-62 T 22-04-2016 IPR012738 Transcription regulator DhaS SII_RS00310 3aa76568db27d76ede991843b02936bb 178 Pfam PF00440 Bacterial regulatory proteins, tetR family 17 55 3.3E-7 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SII_RS06335 36b466a28d51a026212dfd96afef40ff 196 SUPERFAMILY SSF52096 8 192 4.39E-67 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SII_RS06335 36b466a28d51a026212dfd96afef40ff 196 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 1 193 39.673 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 SII_RS06335 36b466a28d51a026212dfd96afef40ff 196 PANTHER PTHR10381:SF22 1 194 5.9E-108 T 22-04-2016 SII_RS06335 36b466a28d51a026212dfd96afef40ff 196 PRINTS PR00127 Clp protease catalytic subunit P signature 17 32 2.2E-44 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 SII_RS06335 36b466a28d51a026212dfd96afef40ff 196 PRINTS PR00127 Clp protease catalytic subunit P signature 57 77 2.2E-44 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 SII_RS06335 36b466a28d51a026212dfd96afef40ff 196 PRINTS PR00127 Clp protease catalytic subunit P signature 168 187 2.2E-44 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 SII_RS06335 36b466a28d51a026212dfd96afef40ff 196 PRINTS PR00127 Clp protease catalytic subunit P signature 88 105 2.2E-44 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 SII_RS06335 36b466a28d51a026212dfd96afef40ff 196 PRINTS PR00127 Clp protease catalytic subunit P signature 109 128 2.2E-44 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 SII_RS06335 36b466a28d51a026212dfd96afef40ff 196 Gene3D G3DSA:3.90.226.10 9 194 3.1E-77 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SII_RS06335 36b466a28d51a026212dfd96afef40ff 196 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 88 99 - T 22-04-2016 IPR018215 ClpP, Ser active site SII_RS06335 36b466a28d51a026212dfd96afef40ff 196 PANTHER PTHR10381 1 194 5.9E-108 T 22-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA SII_RS06335 36b466a28d51a026212dfd96afef40ff 196 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 110 123 - T 22-04-2016 IPR033135 ClpP, histidine active site SII_RS06335 36b466a28d51a026212dfd96afef40ff 196 Pfam PF00574 Clp protease 10 192 3.1E-78 T 22-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA SII_RS03100 3910e76dc8f55a68da334896727d3c2d 257 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 75 248 1.1E-16 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SII_RS03100 3910e76dc8f55a68da334896727d3c2d 257 Gene3D G3DSA:1.10.3720.10 3 252 2.3E-48 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SII_RS03100 3910e76dc8f55a68da334896727d3c2d 257 SUPERFAMILY SSF161098 6 249 3.01E-44 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SII_RS03100 3910e76dc8f55a68da334896727d3c2d 257 PANTHER PTHR30222:SF1 3 254 5.4E-68 T 22-04-2016 SII_RS03100 3910e76dc8f55a68da334896727d3c2d 257 PANTHER PTHR30222 3 254 5.4E-68 T 22-04-2016 SII_RS07560 ad6f8513267abff62846579f3c152587 644 PANTHER PTHR30175 1 593 3.7E-206 T 22-04-2016 SII_RS07560 ad6f8513267abff62846579f3c152587 644 Gene3D G3DSA:3.30.1360.60 1 81 9.9E-24 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 SII_RS07560 ad6f8513267abff62846579f3c152587 644 TIGRFAM TIGR01996 PTS-II-BC-sucr: PTS system, sucrose-specific IIBC component 2 456 8.1E-181 T 22-04-2016 IPR010973 Phosphotransferase system, sucrose-specific IIBC component GO:0008982|GO:0009401|GO:0016021 SII_RS07560 ad6f8513267abff62846579f3c152587 644 PANTHER PTHR30175:SF7 1 593 3.7E-206 T 22-04-2016 SII_RS07560 ad6f8513267abff62846579f3c152587 644 Pfam PF00367 phosphotransferase system, EIIB 9 40 3.4E-13 T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 SII_RS07560 ad6f8513267abff62846579f3c152587 644 SUPERFAMILY SSF55604 6 81 4.45E-18 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 SII_RS07560 ad6f8513267abff62846579f3c152587 644 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 498 618 8.7E-44 T 22-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SII_RS07560 ad6f8513267abff62846579f3c152587 644 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 560 572 - T 22-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SII_RS07560 ad6f8513267abff62846579f3c152587 644 SUPERFAMILY SSF51261 494 641 1.44E-52 T 22-04-2016 IPR011055 Duplicated hybrid motif SII_RS07560 ad6f8513267abff62846579f3c152587 644 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 497 621 1.8E-48 T 22-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SII_RS07560 ad6f8513267abff62846579f3c152587 644 Gene3D G3DSA:2.70.70.10 495 643 3.9E-59 T 22-04-2016 SII_RS07560 ad6f8513267abff62846579f3c152587 644 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 18 35 - T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 SII_RS07560 ad6f8513267abff62846579f3c152587 644 Pfam PF02378 Phosphotransferase system, EIIC 111 401 9.8E-57 T 22-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 SII_RS07560 ad6f8513267abff62846579f3c152587 644 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 27 96 2.9E-15 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 SII_RS00030 19f71cb5503c3ac32a012823f827fe84 189 SUPERFAMILY SSF53178 1 188 2.75E-67 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 SII_RS00030 19f71cb5503c3ac32a012823f827fe84 189 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 15 28 - T 22-04-2016 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 SII_RS00030 19f71cb5503c3ac32a012823f827fe84 189 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 2 180 37.324 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 SII_RS00030 19f71cb5503c3ac32a012823f827fe84 189 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 3 188 8.9E-66 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 SII_RS00030 19f71cb5503c3ac32a012823f827fe84 189 Gene3D G3DSA:3.40.50.1470 1 188 6.7E-70 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 SII_RS00030 19f71cb5503c3ac32a012823f827fe84 189 PANTHER PTHR17224:SF1 3 188 6.6E-74 T 22-04-2016 SII_RS00030 19f71cb5503c3ac32a012823f827fe84 189 Pfam PF01195 Peptidyl-tRNA hydrolase 4 187 8.2E-59 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 SII_RS00030 19f71cb5503c3ac32a012823f827fe84 189 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 109 119 - T 22-04-2016 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 SII_RS00030 19f71cb5503c3ac32a012823f827fe84 189 PANTHER PTHR17224 3 188 6.6E-74 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 SII_RS04805 eba088d02f4cc1d2a069762d518b2397 450 SUPERFAMILY SSF55874 263 433 1.83E-45 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SII_RS04805 eba088d02f4cc1d2a069762d518b2397 450 Gene3D G3DSA:3.30.565.10 262 435 9.5E-49 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SII_RS04805 eba088d02f4cc1d2a069762d518b2397 450 SMART SM00388 208 274 2.4E-20 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SII_RS04805 eba088d02f4cc1d2a069762d518b2397 450 SUPERFAMILY SSF55785 84 200 3.14E-12 T 22-04-2016 IPR000014 PAS domain SII_RS04805 eba088d02f4cc1d2a069762d518b2397 450 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 91 208 2.4E-9 T 22-04-2016 IPR000014 PAS domain SII_RS04805 eba088d02f4cc1d2a069762d518b2397 450 SUPERFAMILY SSF47384 194 273 1.1E-18 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SII_RS04805 eba088d02f4cc1d2a069762d518b2397 450 PANTHER PTHR24423:SF568 1 446 1.4E-196 T 22-04-2016 SII_RS04805 eba088d02f4cc1d2a069762d518b2397 450 SMART SM00387 323 435 3.1E-40 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SII_RS04805 eba088d02f4cc1d2a069762d518b2397 450 Gene3D G3DSA:1.10.287.130 200 261 6.8E-20 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SII_RS04805 eba088d02f4cc1d2a069762d518b2397 450 Pfam PF00512 His Kinase A (phospho-acceptor) domain 209 273 1.4E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SII_RS04805 eba088d02f4cc1d2a069762d518b2397 450 SMART SM00091 94 160 1.4E-7 T 22-04-2016 IPR000014 PAS domain SII_RS04805 eba088d02f4cc1d2a069762d518b2397 450 Pfam PF00989 PAS fold 95 198 7.9E-8 T 22-04-2016 IPR013767 PAS fold GO:0006355 SII_RS04805 eba088d02f4cc1d2a069762d518b2397 450 Gene3D G3DSA:3.30.450.20 85 199 1.8E-11 T 22-04-2016 SII_RS04805 eba088d02f4cc1d2a069762d518b2397 450 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 324 434 1.8E-27 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SII_RS04805 eba088d02f4cc1d2a069762d518b2397 450 PRINTS PR00344 Bacterial sensor protein C-terminal signature 419 432 2.7E-20 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SII_RS04805 eba088d02f4cc1d2a069762d518b2397 450 PRINTS PR00344 Bacterial sensor protein C-terminal signature 395 413 2.7E-20 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SII_RS04805 eba088d02f4cc1d2a069762d518b2397 450 PRINTS PR00344 Bacterial sensor protein C-terminal signature 378 388 2.7E-20 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SII_RS04805 eba088d02f4cc1d2a069762d518b2397 450 PRINTS PR00344 Bacterial sensor protein C-terminal signature 360 374 2.7E-20 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SII_RS04805 eba088d02f4cc1d2a069762d518b2397 450 PANTHER PTHR24423 1 446 1.4E-196 T 22-04-2016 SII_RS04315 d4f91fdccf76176e3f1483a81cc1a5d8 150 PIRSF PIRSF034303 1 150 5.6E-32 T 22-04-2016 IPR012543 Protein of unknown function DUF1694 SII_RS04315 d4f91fdccf76176e3f1483a81cc1a5d8 150 Gene3D G3DSA:3.30.1330.30 1 132 9.5E-39 T 22-04-2016 IPR029064 50S ribosomal protein L30e-like SII_RS04315 d4f91fdccf76176e3f1483a81cc1a5d8 150 Pfam PF07997 Protein of unknown function (DUF1694) 1 119 2.1E-28 T 22-04-2016 IPR012543 Protein of unknown function DUF1694 SII_RS04315 d4f91fdccf76176e3f1483a81cc1a5d8 150 SUPERFAMILY SSF160515 1 130 1.31E-29 T 22-04-2016 SII_RS07230 e494769c4e797f8d5753cfb00dc17aeb 410 Gene3D G3DSA:3.40.47.10 263 409 3.0E-54 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SII_RS07230 e494769c4e797f8d5753cfb00dc17aeb 410 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 254 364 3.6E-32 T 22-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal SII_RS07230 e494769c4e797f8d5753cfb00dc17aeb 410 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 4 406 2.9E-170 T 22-04-2016 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 UniPathway: UPA00094 SII_RS07230 e494769c4e797f8d5753cfb00dc17aeb 410 PANTHER PTHR11712 5 409 9.8E-179 T 22-04-2016 SII_RS07230 e494769c4e797f8d5753cfb00dc17aeb 410 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 4 246 2.2E-54 T 22-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal SII_RS07230 e494769c4e797f8d5753cfb00dc17aeb 410 SUPERFAMILY SSF53901 4 251 8.75E-73 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SII_RS07230 e494769c4e797f8d5753cfb00dc17aeb 410 Gene3D G3DSA:3.40.47.10 4 259 2.8E-73 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SII_RS07230 e494769c4e797f8d5753cfb00dc17aeb 410 SUPERFAMILY SSF53901 214 408 9.26E-66 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SII_RS07230 e494769c4e797f8d5753cfb00dc17aeb 410 PIRSF PIRSF000447 1 410 1.0E-183 T 22-04-2016 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 UniPathway: UPA00094 SII_RS07230 e494769c4e797f8d5753cfb00dc17aeb 410 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 155 171 - T 22-04-2016 IPR018201 Beta-ketoacyl synthase, active site SII_RS07230 e494769c4e797f8d5753cfb00dc17aeb 410 SMART SM00825 Beta-ketoacyl synthase 6 399 9.5E-13 T 22-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain SII_RS04250 f93916c00b690ebbfdf2af97d8c53afa 818 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 28 467 2.6E-145 T 22-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 SII_RS04250 f93916c00b690ebbfdf2af97d8c53afa 818 Gene3D G3DSA:3.30.1360.40 232 328 1.4E-34 T 22-04-2016 IPR024946 Arginine repressor C-terminal-like domain SII_RS04250 f93916c00b690ebbfdf2af97d8c53afa 818 PANTHER PTHR10169:SF47 4 812 0.0 T 22-04-2016 SII_RS04250 f93916c00b690ebbfdf2af97d8c53afa 818 Gene3D G3DSA:2.120.10.90 495 815 2.2E-73 T 22-04-2016 SII_RS04250 f93916c00b690ebbfdf2af97d8c53afa 818 SUPERFAMILY SSF101904 496 815 3.92E-75 T 22-04-2016 SII_RS04250 f93916c00b690ebbfdf2af97d8c53afa 818 Hamap MF_00937 DNA topoisomerase 4 subunit A [parC]. 3 818 33.703 T 22-04-2016 IPR005741 DNA topoisomerase IV subunit A, Gram-positive GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 SII_RS04250 f93916c00b690ebbfdf2af97d8c53afa 818 SUPERFAMILY SSF56719 27 482 5.89E-163 T 22-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 SII_RS04250 f93916c00b690ebbfdf2af97d8c53afa 818 TIGRFAM TIGR01061 parC_Gpos: DNA topoisomerase IV, A subunit 4 742 0.0 T 22-04-2016 IPR005741 DNA topoisomerase IV subunit A, Gram-positive GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 SII_RS04250 f93916c00b690ebbfdf2af97d8c53afa 818 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 702 747 1.5E-4 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 SII_RS04250 f93916c00b690ebbfdf2af97d8c53afa 818 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 653 700 3.6E-13 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 SII_RS04250 f93916c00b690ebbfdf2af97d8c53afa 818 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 546 597 3.5E-5 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 SII_RS04250 f93916c00b690ebbfdf2af97d8c53afa 818 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 605 650 0.05 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 SII_RS04250 f93916c00b690ebbfdf2af97d8c53afa 818 PANTHER PTHR10169 4 812 0.0 T 22-04-2016 SII_RS04250 f93916c00b690ebbfdf2af97d8c53afa 818 Gene3D G3DSA:3.90.199.10 26 231 4.2E-112 T 22-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 SII_RS04250 f93916c00b690ebbfdf2af97d8c53afa 818 Gene3D G3DSA:3.90.199.10 329 394 4.2E-112 T 22-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 SII_RS04250 f93916c00b690ebbfdf2af97d8c53afa 818 SMART SM00434 7 460 2.1E-254 T 22-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 SII_RS05810 22cb67efefc52f6be33da7404da1d611 663 Gene3D G3DSA:1.10.10.10 86 156 9.0E-8 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SII_RS05810 22cb67efefc52f6be33da7404da1d611 663 Gene3D G3DSA:1.10.10.10 7 67 7.5E-9 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SII_RS05810 22cb67efefc52f6be33da7404da1d611 663 SUPERFAMILY SSF55804 520 661 3.31E-16 T 22-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 SII_RS05810 22cb67efefc52f6be33da7404da1d611 663 Pfam PF00874 PRD domain 319 397 4.1E-17 T 22-04-2016 IPR011608 PRD domain GO:0006355 SII_RS05810 22cb67efefc52f6be33da7404da1d611 663 Pfam PF00874 PRD domain 211 285 6.7E-12 T 22-04-2016 IPR011608 PRD domain GO:0006355 SII_RS05810 22cb67efefc52f6be33da7404da1d611 663 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 521 660 2.6E-14 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SII_RS05810 22cb67efefc52f6be33da7404da1d611 663 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 409 465 1.9E-5 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 SII_RS05810 22cb67efefc52f6be33da7404da1d611 663 Gene3D G3DSA:3.40.50.270 408 494 9.8E-8 T 22-04-2016 SII_RS05810 22cb67efefc52f6be33da7404da1d611 663 SUPERFAMILY SSF63520 299 401 3.66E-15 T 22-04-2016 IPR011608 PRD domain GO:0006355 SII_RS05810 22cb67efefc52f6be33da7404da1d611 663 SUPERFAMILY SSF52794 407 494 4.6E-9 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 SII_RS05810 22cb67efefc52f6be33da7404da1d611 663 Pfam PF05043 Mga helix-turn-helix domain 85 171 1.8E-15 T 22-04-2016 IPR007737 Mga helix-turn-helix domain SII_RS05810 22cb67efefc52f6be33da7404da1d611 663 Gene3D G3DSA:1.10.1790.10 318 401 2.3E-16 T 22-04-2016 IPR011608 PRD domain GO:0006355 SII_RS05810 22cb67efefc52f6be33da7404da1d611 663 Gene3D G3DSA:1.10.1790.10 210 285 1.2E-12 T 22-04-2016 IPR011608 PRD domain GO:0006355 SII_RS05810 22cb67efefc52f6be33da7404da1d611 663 SUPERFAMILY SSF63520 211 285 1.57E-13 T 22-04-2016 IPR011608 PRD domain GO:0006355 SII_RS05810 22cb67efefc52f6be33da7404da1d611 663 PANTHER PTHR30185 1 662 9.6E-155 T 22-04-2016 SII_RS05810 22cb67efefc52f6be33da7404da1d611 663 Pfam PF08279 HTH domain 7 65 3.2E-10 T 22-04-2016 IPR013196 Helix-turn-helix, type 11 SII_RS05810 22cb67efefc52f6be33da7404da1d611 663 Gene3D G3DSA:3.40.930.10 518 661 1.0E-18 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SII_RS05810 22cb67efefc52f6be33da7404da1d611 663 PANTHER PTHR30185:SF5 1 662 9.6E-155 T 22-04-2016 SII_RS04155 f4efa1e8597fc7cb3dd4770a05ad8cff 194 SUPERFAMILY SSF52833 1 192 5.16E-34 T 22-04-2016 IPR012336 Thioredoxin-like fold SII_RS04155 f4efa1e8597fc7cb3dd4770a05ad8cff 194 PANTHER PTHR10681:SF68 42 193 2.0E-23 T 22-04-2016 SII_RS04155 f4efa1e8597fc7cb3dd4770a05ad8cff 194 Pfam PF08534 Redoxin 54 184 8.3E-21 T 22-04-2016 IPR013740 Redoxin GO:0016491 SII_RS04155 f4efa1e8597fc7cb3dd4770a05ad8cff 194 Gene3D G3DSA:3.40.30.10 1 193 3.0E-44 T 22-04-2016 IPR012336 Thioredoxin-like fold SII_RS04155 f4efa1e8597fc7cb3dd4770a05ad8cff 194 PANTHER PTHR10681 42 193 2.0E-23 T 22-04-2016 SII_RS05600 525c7694c97623f72172153e6141e987 433 PANTHER PTHR33989 1 430 0.0 T 22-04-2016 SII_RS05600 525c7694c97623f72172153e6141e987 433 Pfam PF02378 Phosphotransferase system, EIIC 26 356 1.4E-65 T 22-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 SII_RS05600 525c7694c97623f72172153e6141e987 433 PANTHER PTHR33989:SF5 1 430 0.0 T 22-04-2016 SII_RS05600 525c7694c97623f72172153e6141e987 433 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 15 428 1.4E-111 T 22-04-2016 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 SII_RS05600 525c7694c97623f72172153e6141e987 433 PIRSF PIRSF006351 1 432 3.1E-126 T 22-04-2016 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 SII_RS08835 74b50f4a96c887a0f974d212f9d11bda 255 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 7 242 2.0E-42 T 22-04-2016 IPR000150 Cof protein GO:0016787 SII_RS08835 74b50f4a96c887a0f974d212f9d11bda 255 Gene3D G3DSA:3.30.1240.10 85 178 1.6E-5 T 22-04-2016 SII_RS08835 74b50f4a96c887a0f974d212f9d11bda 255 PANTHER PTHR10000 8 255 1.0E-29 T 22-04-2016 SII_RS08835 74b50f4a96c887a0f974d212f9d11bda 255 Pfam PF08282 haloacid dehalogenase-like hydrolase 8 243 1.4E-43 T 22-04-2016 IPR023214 HAD-like domain SII_RS08835 74b50f4a96c887a0f974d212f9d11bda 255 SUPERFAMILY SSF56784 6 241 1.02E-44 T 22-04-2016 IPR023214 HAD-like domain SII_RS08835 74b50f4a96c887a0f974d212f9d11bda 255 PANTHER PTHR10000:SF8 8 255 1.0E-29 T 22-04-2016 SII_RS08835 74b50f4a96c887a0f974d212f9d11bda 255 Gene3D G3DSA:3.40.50.1000 5 84 4.9E-31 T 22-04-2016 IPR023214 HAD-like domain SII_RS08835 74b50f4a96c887a0f974d212f9d11bda 255 Gene3D G3DSA:3.40.50.1000 179 242 4.9E-31 T 22-04-2016 IPR023214 HAD-like domain SII_RS08835 74b50f4a96c887a0f974d212f9d11bda 255 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 7 221 3.2E-21 T 22-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 SII_RS05070 8de69c8f0c40578e537bf6633c97c56b 282 SMART SM00382 29 207 2.4E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain SII_RS05070 8de69c8f0c40578e537bf6633c97c56b 282 SUPERFAMILY SSF52540 3 224 1.74E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS05070 8de69c8f0c40578e537bf6633c97c56b 282 PANTHER PTHR24220:SF499 7 221 4.5E-81 T 22-04-2016 SII_RS05070 8de69c8f0c40578e537bf6633c97c56b 282 Gene3D G3DSA:3.40.50.300 2 222 2.2E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS05070 8de69c8f0c40578e537bf6633c97c56b 282 Pfam PF00005 ABC transporter 22 158 5.3E-23 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SII_RS05070 8de69c8f0c40578e537bf6633c97c56b 282 PANTHER PTHR24220 7 221 4.5E-81 T 22-04-2016 SII_RS00475 7bae5d836de0e582265636ec4895565a 305 PIRSF PIRSF001365 2 304 1.1E-68 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 SII_RS00475 7bae5d836de0e582265636ec4895565a 305 PANTHER PTHR12128 5 297 8.8E-114 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 SII_RS00475 7bae5d836de0e582265636ec4895565a 305 SMART SM01130 6 298 5.5E-63 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 SII_RS00475 7bae5d836de0e582265636ec4895565a 305 PANTHER PTHR12128:SF30 5 297 8.8E-114 T 22-04-2016 SII_RS00475 7bae5d836de0e582265636ec4895565a 305 Gene3D G3DSA:3.20.20.70 5 299 8.6E-73 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SII_RS00475 7bae5d836de0e582265636ec4895565a 305 PRINTS PR00146 Dihydrodipicolinate synthase signature 40 61 2.3E-13 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 SII_RS00475 7bae5d836de0e582265636ec4895565a 305 PRINTS PR00146 Dihydrodipicolinate synthase signature 134 151 2.3E-13 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 SII_RS00475 7bae5d836de0e582265636ec4895565a 305 PRINTS PR00146 Dihydrodipicolinate synthase signature 108 124 2.3E-13 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 SII_RS00475 7bae5d836de0e582265636ec4895565a 305 PRINTS PR00146 Dihydrodipicolinate synthase signature 76 94 2.3E-13 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 SII_RS00475 7bae5d836de0e582265636ec4895565a 305 Pfam PF00701 Dihydrodipicolinate synthetase family 7 293 1.1E-55 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 SII_RS00475 7bae5d836de0e582265636ec4895565a 305 SUPERFAMILY SSF51569 7 294 1.15E-68 T 22-04-2016 SII_RS05590 ff33b8f731db4e980d7b5f6f4c441bef 222 SUPERFAMILY SSF51569 1 214 2.93E-58 T 22-04-2016 SII_RS05590 ff33b8f731db4e980d7b5f6f4c441bef 222 Pfam PF00923 Transaldolase 3 207 1.6E-40 T 22-04-2016 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 SII_RS05590 ff33b8f731db4e980d7b5f6f4c441bef 222 PANTHER PTHR10683 1 214 6.0E-88 T 22-04-2016 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 SII_RS05590 ff33b8f731db4e980d7b5f6f4c441bef 222 Gene3D G3DSA:3.20.20.70 1 215 5.2E-53 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SII_RS05590 ff33b8f731db4e980d7b5f6f4c441bef 222 PANTHER PTHR10683:SF11 1 214 6.0E-88 T 22-04-2016 SII_RS05590 ff33b8f731db4e980d7b5f6f4c441bef 222 ProSitePatterns PS00958 Transaldolase active site. 84 101 - T 22-04-2016 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 SII_RS08480 c392b29db7a2097e878a84dc44aa5589 780 PANTHER PTHR32282 30 736 4.4E-189 T 22-04-2016 SII_RS08480 c392b29db7a2097e878a84dc44aa5589 780 Gene3D G3DSA:1.10.3810.10 112 306 1.3E-54 T 22-04-2016 SII_RS08480 c392b29db7a2097e878a84dc44aa5589 780 Pfam PF00912 Transglycosylase 105 277 3.2E-49 T 22-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 SII_RS08480 c392b29db7a2097e878a84dc44aa5589 780 Gene3D G3DSA:3.40.710.10 356 745 3.6E-86 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SII_RS08480 c392b29db7a2097e878a84dc44aa5589 780 PANTHER PTHR32282:SF5 30 736 4.4E-189 T 22-04-2016 SII_RS08480 c392b29db7a2097e878a84dc44aa5589 780 Pfam PF00905 Penicillin binding protein transpeptidase domain 415 649 5.2E-22 T 22-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 SII_RS08480 c392b29db7a2097e878a84dc44aa5589 780 SUPERFAMILY SSF53955 93 319 4.78E-55 T 22-04-2016 IPR023346 Lysozyme-like domain SII_RS08480 c392b29db7a2097e878a84dc44aa5589 780 SUPERFAMILY SSF56601 350 772 7.24E-95 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SII_RS08480 c392b29db7a2097e878a84dc44aa5589 780 SUPERFAMILY SSF56601 277 296 7.24E-95 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SII_RS08400 c0a7fca059a87474ad98dd727692b787 317 Pfam PF02384 N-6 DNA Methylase 69 286 7.3E-12 T 22-04-2016 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 SII_RS08400 c0a7fca059a87474ad98dd727692b787 317 PANTHER PTHR41313 2 317 1.1E-112 T 22-04-2016 SII_RS08400 c0a7fca059a87474ad98dd727692b787 317 SUPERFAMILY SSF53335 13 294 1.63E-37 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SII_RS08400 c0a7fca059a87474ad98dd727692b787 317 Gene3D G3DSA:3.40.50.150 89 299 9.4E-25 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SII_RS08400 c0a7fca059a87474ad98dd727692b787 317 PIRSF PIRSF026567 1 317 7.2E-105 T 22-04-2016 IPR016843 S-adenosyl-L-methionine dependent adenine methyltransferase, bacteria, predicted SII_RS01525 6af09605c8687258d6800a26cbb90c33 186 SUPERFAMILY SSF50249 129 186 1.18E-16 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SII_RS01525 6af09605c8687258d6800a26cbb90c33 186 TIGRFAM TIGR00038 efp: translation elongation factor P 2 186 1.6E-67 T 22-04-2016 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 UniPathway: UPA00345 SII_RS01525 6af09605c8687258d6800a26cbb90c33 186 SMART SM01185 68 122 5.0E-22 T 22-04-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 SII_RS01525 6af09605c8687258d6800a26cbb90c33 186 PIRSF PIRSF005901 1 186 2.0E-62 T 22-04-2016 IPR020599 Translation elongation factor P/YeiP UniPathway: UPA00345 SII_RS01525 6af09605c8687258d6800a26cbb90c33 186 SUPERFAMILY SSF50104 1 64 5.66E-17 T 22-04-2016 IPR008991 Translation protein SH3-like domain SII_RS01525 6af09605c8687258d6800a26cbb90c33 186 Pfam PF09285 Elongation factor P, C-terminal 130 185 1.9E-22 T 22-04-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 SII_RS01525 6af09605c8687258d6800a26cbb90c33 186 SMART SM00841 130 185 2.6E-29 T 22-04-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 SII_RS01525 6af09605c8687258d6800a26cbb90c33 186 ProSitePatterns PS01275 Elongation factor P signature. 151 170 - T 22-04-2016 IPR013852 Translation elongation factor P/YeiP, conserved site UniPathway: UPA00345 SII_RS01525 6af09605c8687258d6800a26cbb90c33 186 PANTHER PTHR30053 1 186 9.2E-76 T 22-04-2016 SII_RS01525 6af09605c8687258d6800a26cbb90c33 186 Hamap MF_00141 Elongation factor P [efp]. 1 186 47.179 T 22-04-2016 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 UniPathway: UPA00345 SII_RS01525 6af09605c8687258d6800a26cbb90c33 186 Gene3D G3DSA:2.40.50.140 66 128 2.6E-22 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SII_RS01525 6af09605c8687258d6800a26cbb90c33 186 SUPERFAMILY SSF50249 66 130 7.71E-18 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SII_RS01525 6af09605c8687258d6800a26cbb90c33 186 Pfam PF01132 Elongation factor P (EF-P) OB domain 69 122 5.1E-18 T 22-04-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 SII_RS01525 6af09605c8687258d6800a26cbb90c33 186 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 3 61 1.5E-22 T 22-04-2016 IPR013185 Translation elongation factor, KOW-like UniPathway: UPA00345 SII_RS01525 6af09605c8687258d6800a26cbb90c33 186 Gene3D G3DSA:2.40.50.140 129 186 1.7E-24 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SII_RS01525 6af09605c8687258d6800a26cbb90c33 186 Gene3D G3DSA:2.30.30.30 1 64 7.8E-23 T 22-04-2016 IPR014722 Ribosomal protein L2 domain 2 SII_RS04720 2e495e91f3cbd429fd7eacc979c35632 114 Gene3D G3DSA:3.30.70.1490 10 112 2.2E-12 T 22-04-2016 SII_RS04720 2e495e91f3cbd429fd7eacc979c35632 114 PANTHER PTHR39178 2 114 9.7E-40 T 22-04-2016 SII_RS04720 2e495e91f3cbd429fd7eacc979c35632 114 Pfam PF04327 Cysteine peptidase C108, N-terminal of ribosomal L27 1 106 1.1E-20 T 22-04-2016 IPR007422 Cysteine peptidase C108, N-terminal of ribosomal L27 SII_RS04720 2e495e91f3cbd429fd7eacc979c35632 114 SUPERFAMILY SSF118010 1 108 1.05E-28 T 22-04-2016 SII_RS03245 766313c150ebeb81e8a504680d42442a 461 PANTHER PTHR22683:SF44 59 446 1.8E-205 T 22-04-2016 SII_RS03245 766313c150ebeb81e8a504680d42442a 461 PANTHER PTHR22683 59 446 1.8E-205 T 22-04-2016 SII_RS03245 766313c150ebeb81e8a504680d42442a 461 Gene3D G3DSA:3.40.50.300 207 384 2.2E-20 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS03245 766313c150ebeb81e8a504680d42442a 461 Pfam PF01580 FtsK/SpoIIIE family 217 301 2.5E-7 T 22-04-2016 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 SII_RS03245 766313c150ebeb81e8a504680d42442a 461 SUPERFAMILY SSF52540 212 386 2.13E-22 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS00465 7be64492b3afb3efe1519a7daa9faf95 151 PANTHER PTHR34986:SF1 2 150 7.5E-44 T 22-04-2016 SII_RS00465 7be64492b3afb3efe1519a7daa9faf95 151 PANTHER PTHR34986 2 150 7.5E-44 T 22-04-2016 SII_RS00465 7be64492b3afb3efe1519a7daa9faf95 151 TIGRFAM TIGR00022 TIGR00022: YhcH/YjgK/YiaL family protein 1 149 3.8E-34 T 22-04-2016 IPR004375 YhcH/YjgK/YiaL family SII_RS00465 7be64492b3afb3efe1519a7daa9faf95 151 Gene3D G3DSA:2.60.120.370 1 149 1.2E-44 T 22-04-2016 IPR004375 YhcH/YjgK/YiaL family SII_RS00465 7be64492b3afb3efe1519a7daa9faf95 151 Pfam PF04074 Domain of unknown function (DUF386) 1 147 9.0E-39 T 22-04-2016 IPR004375 YhcH/YjgK/YiaL family SII_RS00465 7be64492b3afb3efe1519a7daa9faf95 151 SUPERFAMILY SSF51197 1 149 9.89E-39 T 22-04-2016 SII_RS08015 c9f314d8b53938efd9af04b2d17f9241 244 Pfam PF09359 VTC domain 10 227 2.2E-15 T 22-04-2016 IPR018966 VTC domain SII_RS08735 f4851a91b34d414ecb4da7f14237abea 101 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 1 94 19.971 T 22-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SII_RS08735 f4851a91b34d414ecb4da7f14237abea 101 Gene3D G3DSA:2.30.30.30 1 89 1.3E-21 T 22-04-2016 IPR014722 Ribosomal protein L2 domain 2 SII_RS08735 f4851a91b34d414ecb4da7f14237abea 101 ProSitePatterns PS01108 Ribosomal protein L24 signature. 6 23 - T 22-04-2016 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SII_RS08735 f4851a91b34d414ecb4da7f14237abea 101 SUPERFAMILY SSF50104 2 99 1.88E-30 T 22-04-2016 IPR008991 Translation protein SH3-like domain SII_RS08735 f4851a91b34d414ecb4da7f14237abea 101 PANTHER PTHR12903 1 101 8.9E-42 T 22-04-2016 SII_RS08735 f4851a91b34d414ecb4da7f14237abea 101 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 3 99 2.6E-34 T 22-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SII_RS08735 f4851a91b34d414ecb4da7f14237abea 101 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 38 99 4.6E-26 T 22-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SII_RS08735 f4851a91b34d414ecb4da7f14237abea 101 Pfam PF00467 KOW motif 6 36 1.4E-6 T 22-04-2016 IPR005824 KOW SII_RS08735 f4851a91b34d414ecb4da7f14237abea 101 SMART SM00739 2 29 3.6E-4 T 22-04-2016 IPR005824 KOW SII_RS00675 c71d190cac2ee079661e3ecf4372692a 153 PIRSF PIRSF010607 1 151 6.0E-62 T 22-04-2016 IPR008463 Transcriptional repressor of class III stress genes GO:0003677|GO:0006355|GO:0006950 SII_RS00675 c71d190cac2ee079661e3ecf4372692a 153 PANTHER PTHR40028:SF1 1 150 1.0E-61 T 22-04-2016 SII_RS00675 c71d190cac2ee079661e3ecf4372692a 153 Pfam PF05848 Firmicute transcriptional repressor of class III stress genes (CtsR) 5 146 2.8E-49 T 22-04-2016 IPR008463 Transcriptional repressor of class III stress genes GO:0003677|GO:0006355|GO:0006950 SII_RS00675 c71d190cac2ee079661e3ecf4372692a 153 PANTHER PTHR40028 1 150 1.0E-61 T 22-04-2016 SII_RS09235 abfd07dbaedfcee7292fde06734c8de8 173 Gene3D G3DSA:1.10.10.60 7 65 6.3E-16 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SII_RS09235 abfd07dbaedfcee7292fde06734c8de8 173 PANTHER PTHR30328:SF20 1 172 3.3E-29 T 22-04-2016 SII_RS09235 abfd07dbaedfcee7292fde06734c8de8 173 SUPERFAMILY SSF46689 2 65 3.04E-15 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SII_RS09235 abfd07dbaedfcee7292fde06734c8de8 173 Pfam PF00440 Bacterial regulatory proteins, tetR family 18 58 2.8E-11 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SII_RS09235 abfd07dbaedfcee7292fde06734c8de8 173 PANTHER PTHR30328 1 172 3.3E-29 T 22-04-2016 SII_RS07525 094eb033542f748220904e62a214f078 137 Pfam PF07883 Cupin domain 38 106 2.2E-8 T 22-04-2016 IPR013096 Cupin 2, conserved barrel SII_RS07525 094eb033542f748220904e62a214f078 137 Gene3D G3DSA:2.60.120.10 27 110 2.0E-13 T 22-04-2016 IPR014710 RmlC-like jelly roll fold SII_RS07525 094eb033542f748220904e62a214f078 137 SUPERFAMILY SSF51182 29 112 1.31E-13 T 22-04-2016 IPR011051 RmlC-like cupin domain SII_RS00810 48f3ede418eaaf9382b8d34e5ea6e351 96 SUPERFAMILY SSF140453 3 95 4.58E-17 T 22-04-2016 IPR010310 Type VII secretion system ESAT-6-like SII_RS00810 48f3ede418eaaf9382b8d34e5ea6e351 96 Pfam PF06013 Proteins of 100 residues with WXG 4 87 9.6E-15 T 22-04-2016 IPR010310 Type VII secretion system ESAT-6-like SII_RS00810 48f3ede418eaaf9382b8d34e5ea6e351 96 Gene3D G3DSA:1.10.287.1060 3 95 7.7E-11 T 22-04-2016 SII_RS00810 48f3ede418eaaf9382b8d34e5ea6e351 96 TIGRFAM TIGR03930 WXG100_ESAT6: WXG100 family type VII secretion target 3 92 1.3E-16 T 22-04-2016 IPR010310 Type VII secretion system ESAT-6-like SII_RS06835 da6dca6b178ff09ba4d711fe249895e4 413 PANTHER PTHR21581 5 165 1.6E-103 T 22-04-2016 SII_RS06835 da6dca6b178ff09ba4d711fe249895e4 413 PANTHER PTHR21581 181 365 1.6E-103 T 22-04-2016 SII_RS06835 da6dca6b178ff09ba4d711fe249895e4 413 SUPERFAMILY SSF69189 287 376 6.28E-13 T 22-04-2016 IPR015956 Penicillin-binding protein-associated GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 SII_RS06835 da6dca6b178ff09ba4d711fe249895e4 413 SUPERFAMILY SSF56601 5 294 4.88E-60 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SII_RS06835 da6dca6b178ff09ba4d711fe249895e4 413 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 138 151 1.0E-11 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 SII_RS06835 da6dca6b178ff09ba4d711fe249895e4 413 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 55 66 1.0E-11 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 SII_RS06835 da6dca6b178ff09ba4d711fe249895e4 413 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 111 128 1.0E-11 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 SII_RS06835 da6dca6b178ff09ba4d711fe249895e4 413 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 294 391 9.7E-12 T 22-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 SII_RS06835 da6dca6b178ff09ba4d711fe249895e4 413 Gene3D G3DSA:2.60.410.10 296 394 3.5E-24 T 22-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 SII_RS06835 da6dca6b178ff09ba4d711fe249895e4 413 PANTHER PTHR21581:SF11 5 165 1.6E-103 T 22-04-2016 SII_RS06835 da6dca6b178ff09ba4d711fe249895e4 413 PANTHER PTHR21581:SF11 181 365 1.6E-103 T 22-04-2016 SII_RS06835 da6dca6b178ff09ba4d711fe249895e4 413 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 24 270 3.0E-77 T 22-04-2016 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 SII_RS06835 da6dca6b178ff09ba4d711fe249895e4 413 Gene3D G3DSA:3.40.710.10 8 293 9.2E-84 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SII_RS06835 da6dca6b178ff09ba4d711fe249895e4 413 SMART SM00936 294 394 2.3E-12 T 22-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 SII_RS07670 5f5a677f0b2480ca9066a9b77a1addc4 344 Gene3D G3DSA:1.10.10.10 2 81 6.4E-29 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SII_RS07670 5f5a677f0b2480ca9066a9b77a1addc4 344 Hamap MF_00081 Heat-inducible transcription repressor HrcA [hrcA]. 1 322 25.838 T 22-04-2016 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 SII_RS07670 5f5a677f0b2480ca9066a9b77a1addc4 344 PANTHER PTHR30363:SF17 1 306 1.6E-106 T 22-04-2016 SII_RS07670 5f5a677f0b2480ca9066a9b77a1addc4 344 Pfam PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding 3 57 6.4E-7 T 22-04-2016 IPR005104 Winged helix-turn-helix transcription repressor, HrcA DNA-binding domain GO:0003677|GO:0006355 SII_RS07670 5f5a677f0b2480ca9066a9b77a1addc4 344 Pfam PF01628 HrcA protein C terminal domain 102 314 2.8E-26 T 22-04-2016 IPR021153 Heat-inducible transcription repressor HrcA, C-terminal GO:0003677|GO:0006355 SII_RS07670 5f5a677f0b2480ca9066a9b77a1addc4 344 Gene3D G3DSA:3.30.450.40 175 333 2.4E-12 T 22-04-2016 IPR029016 GAF domain-like SII_RS07670 5f5a677f0b2480ca9066a9b77a1addc4 344 SUPERFAMILY SSF46785 2 80 1.82E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SII_RS07670 5f5a677f0b2480ca9066a9b77a1addc4 344 TIGRFAM TIGR00331 hrcA: heat-inducible transcription repressor HrcA 3 328 3.9E-84 T 22-04-2016 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 SII_RS07670 5f5a677f0b2480ca9066a9b77a1addc4 344 PANTHER PTHR30363 1 306 1.6E-106 T 22-04-2016 SII_RS07670 5f5a677f0b2480ca9066a9b77a1addc4 344 SUPERFAMILY SSF55781 69 332 1.94E-28 T 22-04-2016 IPR029016 GAF domain-like SII_RS07670 5f5a677f0b2480ca9066a9b77a1addc4 344 PIRSF PIRSF005485 1 333 8.5E-72 T 22-04-2016 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 SII_RS03820 f98b463ef084ef40659d9d4465ea9503 315 Gene3D G3DSA:3.40.50.720 2 189 1.3E-49 T 22-04-2016 IPR016040 NAD(P)-binding domain SII_RS03820 f98b463ef084ef40659d9d4465ea9503 315 Pfam PF02558 Ketopantoate reductase PanE/ApbA 3 150 2.6E-40 T 22-04-2016 IPR013332 Ketopantoate reductase, N-terminal domain GO:0008677|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 SII_RS03820 f98b463ef084ef40659d9d4465ea9503 315 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 2 310 2.3E-77 T 22-04-2016 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0015940|GO:0016491|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 SII_RS03820 f98b463ef084ef40659d9d4465ea9503 315 PANTHER PTHR21708 1 311 2.6E-60 T 22-04-2016 SII_RS03820 f98b463ef084ef40659d9d4465ea9503 315 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 181 308 2.8E-28 T 22-04-2016 IPR013752 Ketopantoate reductase, C-terminal domain GO:0016491|GO:0050661|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 SII_RS03820 f98b463ef084ef40659d9d4465ea9503 315 Gene3D G3DSA:1.10.1040.10 190 311 4.7E-36 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 SII_RS03820 f98b463ef084ef40659d9d4465ea9503 315 SUPERFAMILY SSF51735 2 136 1.2E-19 T 22-04-2016 IPR016040 NAD(P)-binding domain SII_RS03820 f98b463ef084ef40659d9d4465ea9503 315 PANTHER PTHR21708:SF24 1 311 2.6E-60 T 22-04-2016 SII_RS03820 f98b463ef084ef40659d9d4465ea9503 315 SUPERFAMILY SSF48179 181 309 3.74E-26 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 SII_RS00450 a91e87577895a2494cb4b0f67ae74e88 441 SUPERFAMILY SSF53850 20 437 4.18E-65 T 22-04-2016 SII_RS00450 a91e87577895a2494cb4b0f67ae74e88 441 Gene3D G3DSA:3.40.190.10 42 162 6.5E-34 T 22-04-2016 SII_RS00450 a91e87577895a2494cb4b0f67ae74e88 441 Gene3D G3DSA:3.40.190.10 338 393 6.5E-34 T 22-04-2016 SII_RS00450 a91e87577895a2494cb4b0f67ae74e88 441 PANTHER PTHR30061 1 438 2.8E-56 T 22-04-2016 SII_RS00450 a91e87577895a2494cb4b0f67ae74e88 441 Gene3D G3DSA:3.40.190.10 165 337 1.7E-20 T 22-04-2016 SII_RS00450 a91e87577895a2494cb4b0f67ae74e88 441 Pfam PF01547 Bacterial extracellular solute-binding protein 61 352 1.7E-30 T 22-04-2016 IPR006059 Solute-binding family 1 GO:0005215|GO:0006810 SII_RS06545 0118964ab632f570fca94af8959a8ff7 179 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 114 120 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 SII_RS06545 0118964ab632f570fca94af8959a8ff7 179 PIRSF PIRSF004553 1 179 8.6E-56 T 22-04-2016 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SII_RS06545 0118964ab632f570fca94af8959a8ff7 179 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 2 177 4.1E-50 T 22-04-2016 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SII_RS06545 0118964ab632f570fca94af8959a8ff7 179 Gene3D G3DSA:3.40.50.150 1 178 1.6E-59 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SII_RS06545 0118964ab632f570fca94af8959a8ff7 179 PANTHER PTHR18895 14 178 5.7E-44 T 22-04-2016 SII_RS06545 0118964ab632f570fca94af8959a8ff7 179 Pfam PF03602 Conserved hypothetical protein 95 1 177 2.8E-61 T 22-04-2016 SII_RS06545 0118964ab632f570fca94af8959a8ff7 179 PANTHER PTHR18895:SF60 14 178 5.7E-44 T 22-04-2016 SII_RS06545 0118964ab632f570fca94af8959a8ff7 179 SUPERFAMILY SSF53335 1 178 1.34E-47 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SII_RS07245 fe1319a605de8d482cceed7f6d9083bc 324 Gene3D G3DSA:3.20.20.70 1 299 2.5E-73 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SII_RS07245 fe1319a605de8d482cceed7f6d9083bc 324 SUPERFAMILY SSF51412 1 311 2.75E-73 T 22-04-2016 SII_RS07245 fe1319a605de8d482cceed7f6d9083bc 324 PANTHER PTHR32332:SF20 1 323 9.4E-134 T 22-04-2016 SII_RS07245 fe1319a605de8d482cceed7f6d9083bc 324 Pfam PF03060 Nitronate monooxygenase 3 303 1.4E-73 T 22-04-2016 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 SII_RS07245 fe1319a605de8d482cceed7f6d9083bc 324 PANTHER PTHR32332 1 323 9.4E-134 T 22-04-2016 SII_RS07245 fe1319a605de8d482cceed7f6d9083bc 324 TIGRFAM TIGR03151 enACPred_II: putative enoyl-[acyl-carrier-protein] reductase II 3 312 3.9E-154 T 22-04-2016 IPR017569 Enoyl-(acyl-carrier-protein) reductase II, putative SII_RS00610 b0ad0e8f53fa3839d3a4db59f28a02b8 500 PANTHER PTHR30477 1 341 1.5E-113 T 22-04-2016 SII_RS00610 b0ad0e8f53fa3839d3a4db59f28a02b8 500 Gene3D G3DSA:2.40.128.20 315 500 1.3E-86 T 22-04-2016 IPR012674 Calycin SII_RS00610 b0ad0e8f53fa3839d3a4db59f28a02b8 500 Pfam PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment 321 500 8.5E-84 T 22-04-2016 IPR015304 ZinT domain GO:0008270 SII_RS00610 b0ad0e8f53fa3839d3a4db59f28a02b8 500 Gene3D G3DSA:3.40.50.1980 187 305 2.0E-40 T 22-04-2016 SII_RS00610 b0ad0e8f53fa3839d3a4db59f28a02b8 500 PRINTS PR00690 Adhesin family signature 192 213 2.2E-13 T 22-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 SII_RS00610 b0ad0e8f53fa3839d3a4db59f28a02b8 500 PRINTS PR00690 Adhesin family signature 59 72 2.2E-13 T 22-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 SII_RS00610 b0ad0e8f53fa3839d3a4db59f28a02b8 500 PRINTS PR00690 Adhesin family signature 245 263 2.2E-13 T 22-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 SII_RS00610 b0ad0e8f53fa3839d3a4db59f28a02b8 500 PRINTS PR00690 Adhesin family signature 72 89 2.2E-13 T 22-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 SII_RS00610 b0ad0e8f53fa3839d3a4db59f28a02b8 500 PRINTS PR00690 Adhesin family signature 28 46 2.2E-13 T 22-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 SII_RS00610 b0ad0e8f53fa3839d3a4db59f28a02b8 500 PANTHER PTHR30477:SF10 1 341 1.5E-113 T 22-04-2016 SII_RS00610 b0ad0e8f53fa3839d3a4db59f28a02b8 500 SUPERFAMILY SSF50814 318 500 8.03E-79 T 22-04-2016 IPR011038 Calycin-like SII_RS00610 b0ad0e8f53fa3839d3a4db59f28a02b8 500 PRINTS PR00691 Adhesin B signature 28 49 2.5E-19 T 22-04-2016 IPR006129 Adhesin B GO:0007155 SII_RS00610 b0ad0e8f53fa3839d3a4db59f28a02b8 500 PRINTS PR00691 Adhesin B signature 72 91 2.5E-19 T 22-04-2016 IPR006129 Adhesin B GO:0007155 SII_RS00610 b0ad0e8f53fa3839d3a4db59f28a02b8 500 PRINTS PR00691 Adhesin B signature 53 71 2.5E-19 T 22-04-2016 IPR006129 Adhesin B GO:0007155 SII_RS00610 b0ad0e8f53fa3839d3a4db59f28a02b8 500 PRINTS PR00691 Adhesin B signature 192 209 2.5E-19 T 22-04-2016 IPR006129 Adhesin B GO:0007155 SII_RS00610 b0ad0e8f53fa3839d3a4db59f28a02b8 500 PRINTS PR00691 Adhesin B signature 285 303 2.5E-19 T 22-04-2016 IPR006129 Adhesin B GO:0007155 SII_RS00610 b0ad0e8f53fa3839d3a4db59f28a02b8 500 PRINTS PR00691 Adhesin B signature 241 258 2.5E-19 T 22-04-2016 IPR006129 Adhesin B GO:0007155 SII_RS00610 b0ad0e8f53fa3839d3a4db59f28a02b8 500 PRINTS PR00691 Adhesin B signature 136 155 2.5E-19 T 22-04-2016 IPR006129 Adhesin B GO:0007155 SII_RS00610 b0ad0e8f53fa3839d3a4db59f28a02b8 500 SUPERFAMILY SSF53807 14 304 7.85E-91 T 22-04-2016 SII_RS00610 b0ad0e8f53fa3839d3a4db59f28a02b8 500 Pfam PF01297 Zinc-uptake complex component A periplasmic 31 304 1.5E-82 T 22-04-2016 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 SII_RS00610 b0ad0e8f53fa3839d3a4db59f28a02b8 500 Gene3D G3DSA:3.40.50.1980 17 186 3.0E-61 T 22-04-2016 SII_RS02220 a85ac3ec2f6474922d66fed43eeba595 248 Gene3D G3DSA:3.40.50.150 34 246 1.3E-72 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SII_RS02220 a85ac3ec2f6474922d66fed43eeba595 248 Pfam PF05175 Methyltransferase small domain 21 174 4.4E-13 T 22-04-2016 IPR007848 Methyltransferase small domain GO:0008168 SII_RS02220 a85ac3ec2f6474922d66fed43eeba595 248 PANTHER PTHR18895:SF75 1 242 5.8E-96 T 22-04-2016 SII_RS02220 a85ac3ec2f6474922d66fed43eeba595 248 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 120 126 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 SII_RS02220 a85ac3ec2f6474922d66fed43eeba595 248 SUPERFAMILY SSF53335 16 199 4.44E-31 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SII_RS02220 a85ac3ec2f6474922d66fed43eeba595 248 PANTHER PTHR18895 1 242 5.8E-96 T 22-04-2016 SII_RS08195 37b7dbbe19a6b92d9f2f9a45555aad56 164 PANTHER PTHR33799 1 149 1.7E-18 T 22-04-2016 SII_RS08195 37b7dbbe19a6b92d9f2f9a45555aad56 164 Pfam PF03830 PTS system sorbose subfamily IIB component 3 149 1.2E-37 T 22-04-2016 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 SII_RS08195 37b7dbbe19a6b92d9f2f9a45555aad56 164 SUPERFAMILY SSF52728 1 163 3.92E-41 T 22-04-2016 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 SII_RS08195 37b7dbbe19a6b92d9f2f9a45555aad56 164 Gene3D G3DSA:3.40.35.10 1 163 3.9E-43 T 22-04-2016 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 SII_RS00995 75b88c4d1afd6de56d2a6f23d7fa2eee 272 Gene3D G3DSA:1.10.10.10 1 73 1.5E-37 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SII_RS00995 75b88c4d1afd6de56d2a6f23d7fa2eee 272 PANTHER PTHR11776:SF9 48 264 1.4E-120 T 22-04-2016 SII_RS00995 75b88c4d1afd6de56d2a6f23d7fa2eee 272 Pfam PF09182 Bacterial purine repressor, N-terminal 4 73 7.1E-29 T 22-04-2016 IPR015265 Bacterial purine repressor, N-terminal GO:0003677|GO:0006355 SII_RS00995 75b88c4d1afd6de56d2a6f23d7fa2eee 272 PANTHER PTHR11776 48 264 1.4E-120 T 22-04-2016 SII_RS00995 75b88c4d1afd6de56d2a6f23d7fa2eee 272 SUPERFAMILY SSF53271 94 244 6.49E-35 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like SII_RS00995 75b88c4d1afd6de56d2a6f23d7fa2eee 272 Gene3D G3DSA:3.40.50.2020 83 265 6.5E-54 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like SII_RS00995 75b88c4d1afd6de56d2a6f23d7fa2eee 272 ProDom PD029816 REPRESSOR OPERON PUR TRANSCRIPTION PURINE TRANSCRIPTIONAL PURR REGULATION DNA-BINDING GLYCOSYLTRANSFERASE 10 73 6.0E-28 T 22-04-2016 IPR015265 Bacterial purine repressor, N-terminal GO:0003677|GO:0006355 SII_RS00995 75b88c4d1afd6de56d2a6f23d7fa2eee 272 SUPERFAMILY SSF46785 2 73 1.72E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SII_RS00995 75b88c4d1afd6de56d2a6f23d7fa2eee 272 TIGRFAM TIGR01743 purR_Bsub: pur operon repressor PurR 3 270 5.7E-131 T 22-04-2016 IPR010078 Pur operon repressor GO:0003677|GO:0045892|GO:0045982 SII_RS00995 75b88c4d1afd6de56d2a6f23d7fa2eee 272 Pfam PF00156 Phosphoribosyl transferase domain 107 264 6.7E-28 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 SII_RS04540 dbf59bae85d371c692f2790f6adc9e09 257 PIRSF PIRSF000915 1 253 2.4E-52 T 22-04-2016 IPR006357 HAD-superfamily hydrolase, subfamily IIA SII_RS04540 dbf59bae85d371c692f2790f6adc9e09 257 Gene3D G3DSA:3.40.50.1000 178 251 5.6E-41 T 22-04-2016 IPR023214 HAD-like domain SII_RS04540 dbf59bae85d371c692f2790f6adc9e09 257 Gene3D G3DSA:3.40.50.1000 3 80 5.6E-41 T 22-04-2016 IPR023214 HAD-like domain SII_RS04540 dbf59bae85d371c692f2790f6adc9e09 257 Pfam PF13242 HAD-hyrolase-like 179 251 5.1E-21 T 22-04-2016 SII_RS04540 dbf59bae85d371c692f2790f6adc9e09 257 TIGRFAM TIGR01460 HAD-SF-IIA: HAD hydrolase, family IIA 7 228 1.1E-39 T 22-04-2016 IPR006357 HAD-superfamily hydrolase, subfamily IIA SII_RS04540 dbf59bae85d371c692f2790f6adc9e09 257 SUPERFAMILY SSF56784 3 252 1.55E-73 T 22-04-2016 IPR023214 HAD-like domain SII_RS04540 dbf59bae85d371c692f2790f6adc9e09 257 Gene3D G3DSA:3.40.50.10410 86 177 6.4E-38 T 22-04-2016 IPR023215 Nitrophenylphosphatase-like domain SII_RS04540 dbf59bae85d371c692f2790f6adc9e09 257 TIGRFAM TIGR01457 HAD-SF-IIA-hyp2: HAD hydrolase, TIGR01457 family 3 252 1.4E-125 T 22-04-2016 IPR006354 HAD-superfamily hydrolase, subfamily IIA, hypothetical 1 SII_RS04540 dbf59bae85d371c692f2790f6adc9e09 257 PANTHER PTHR19288:SF3 2 253 4.1E-98 T 22-04-2016 SII_RS04540 dbf59bae85d371c692f2790f6adc9e09 257 PANTHER PTHR19288 2 253 4.1E-98 T 22-04-2016 SII_RS04540 dbf59bae85d371c692f2790f6adc9e09 257 Pfam PF13344 Haloacid dehalogenase-like hydrolase 7 106 1.2E-20 T 22-04-2016 IPR006357 HAD-superfamily hydrolase, subfamily IIA SII_RS08765 ecbe406dc3351db134e780c2ced1a4f0 114 SUPERFAMILY SSF54843 6 114 1.44E-44 T 22-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 SII_RS08765 ecbe406dc3351db134e780c2ced1a4f0 114 Gene3D G3DSA:3.90.470.10 6 114 9.3E-45 T 22-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 SII_RS08765 ecbe406dc3351db134e780c2ced1a4f0 114 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 5 114 30.071 T 22-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 SII_RS08765 ecbe406dc3351db134e780c2ced1a4f0 114 PANTHER PTHR13501 1 113 6.7E-50 T 22-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 SII_RS08765 ecbe406dc3351db134e780c2ced1a4f0 114 Pfam PF00237 Ribosomal protein L22p/L17e 12 111 9.6E-35 T 22-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 SII_RS08765 ecbe406dc3351db134e780c2ced1a4f0 114 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 9 111 1.2E-46 T 22-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 SII_RS08765 ecbe406dc3351db134e780c2ced1a4f0 114 ProSitePatterns PS00464 Ribosomal protein L22 signature. 87 111 - T 22-04-2016 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SII_RS01905 f05ad4b3712c10c8d4325feaba1c5e68 107 Gene3D G3DSA:1.10.10.10 9 89 1.7E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SII_RS01905 f05ad4b3712c10c8d4325feaba1c5e68 107 SUPERFAMILY SSF46767 10 87 1.14E-19 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 SII_RS01905 f05ad4b3712c10c8d4325feaba1c5e68 107 PANTHER PTHR10815:SF2 10 102 6.7E-29 T 22-04-2016 SII_RS01905 f05ad4b3712c10c8d4325feaba1c5e68 107 PANTHER PTHR10815 10 102 6.7E-29 T 22-04-2016 SII_RS01905 f05ad4b3712c10c8d4325feaba1c5e68 107 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 12 85 4.5E-19 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 SII_RS01845 82ae088c05a1c9a1a73ce9eb62c7576c 173 Gene3D G3DSA:3.60.21.10 3 166 3.4E-42 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like SII_RS01845 82ae088c05a1c9a1a73ce9eb62c7576c 173 PANTHER PTHR11124:SF14 1 162 2.9E-46 T 22-04-2016 SII_RS01845 82ae088c05a1c9a1a73ce9eb62c7576c 173 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 6 149 1.8E-22 T 22-04-2016 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type SII_RS01845 82ae088c05a1c9a1a73ce9eb62c7576c 173 PANTHER PTHR11124 1 162 2.9E-46 T 22-04-2016 IPR000979 Phosphodiesterase MJ0936/Vps29 SII_RS01845 82ae088c05a1c9a1a73ce9eb62c7576c 173 SUPERFAMILY SSF56300 5 169 1.29E-45 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like SII_RS01845 82ae088c05a1c9a1a73ce9eb62c7576c 173 TIGRFAM TIGR00040 yfcE: phosphodiesterase, MJ0936 family 6 152 7.9E-23 T 22-04-2016 IPR000979 Phosphodiesterase MJ0936/Vps29 SII_RS08730 435b1c83ef5936efaf1f1ed5eb9675b9 180 ProSitePatterns PS00358 Ribosomal protein L5 signature. 58 74 - T 22-04-2016 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SII_RS08730 435b1c83ef5936efaf1f1ed5eb9675b9 180 Pfam PF00673 ribosomal L5P family C-terminus 86 178 6.1E-39 T 22-04-2016 IPR031309 Ribosomal protein L5, C-terminal SII_RS08730 435b1c83ef5936efaf1f1ed5eb9675b9 180 Pfam PF00281 Ribosomal protein L5 25 81 4.8E-26 T 22-04-2016 IPR031310 Ribosomal protein L5, N-terminal SII_RS08730 435b1c83ef5936efaf1f1ed5eb9675b9 180 PIRSF PIRSF002161 1 180 3.3E-65 T 22-04-2016 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 SII_RS08730 435b1c83ef5936efaf1f1ed5eb9675b9 180 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 2 180 43.515 T 22-04-2016 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 SII_RS08730 435b1c83ef5936efaf1f1ed5eb9675b9 180 SUPERFAMILY SSF55282 4 179 2.19E-74 T 22-04-2016 IPR022803 Ribosomal protein L5 domain SII_RS08730 435b1c83ef5936efaf1f1ed5eb9675b9 180 PANTHER PTHR11994 1 179 2.4E-93 T 22-04-2016 SII_RS08730 435b1c83ef5936efaf1f1ed5eb9675b9 180 Gene3D G3DSA:3.30.1440.10 3 179 2.9E-75 T 22-04-2016 IPR022803 Ribosomal protein L5 domain SII_RS03340 8f05c56bd20408565baf39de7c75f06f 2075 Pfam PF00176 SNF2 family N-terminal domain 1270 1521 5.9E-12 T 22-04-2016 IPR000330 SNF2-related, N-terminal domain GO:0005524 SII_RS03340 8f05c56bd20408565baf39de7c75f06f 2075 SMART SM00487 1249 1515 1.1E-15 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain SII_RS03340 8f05c56bd20408565baf39de7c75f06f 2075 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 595 619 6.3E-7 T 22-04-2016 SII_RS03340 8f05c56bd20408565baf39de7c75f06f 2075 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 571 583 6.3E-7 T 22-04-2016 SII_RS03340 8f05c56bd20408565baf39de7c75f06f 2075 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 510 524 6.3E-7 T 22-04-2016 SII_RS03340 8f05c56bd20408565baf39de7c75f06f 2075 Gene3D G3DSA:3.40.50.300 1677 1805 9.8E-15 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS03340 8f05c56bd20408565baf39de7c75f06f 2075 Gene3D G3DSA:3.40.50.150 486 679 8.4E-44 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SII_RS03340 8f05c56bd20408565baf39de7c75f06f 2075 SUPERFAMILY SSF53335 475 676 1.76E-33 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SII_RS03340 8f05c56bd20408565baf39de7c75f06f 2075 SUPERFAMILY SSF52540 1572 1881 7.4E-29 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS03340 8f05c56bd20408565baf39de7c75f06f 2075 Gene3D G3DSA:3.40.50.300 1250 1361 7.5E-23 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS03340 8f05c56bd20408565baf39de7c75f06f 2075 Gene3D G3DSA:3.40.50.300 1418 1501 7.5E-23 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS03340 8f05c56bd20408565baf39de7c75f06f 2075 Pfam PF00271 Helicase conserved C-terminal domain 1698 1771 1.8E-7 T 22-04-2016 IPR001650 Helicase, C-terminal SII_RS03340 8f05c56bd20408565baf39de7c75f06f 2075 SUPERFAMILY SSF52540 1417 1518 1.38E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS03340 8f05c56bd20408565baf39de7c75f06f 2075 SUPERFAMILY SSF52540 1217 1363 1.38E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS03340 8f05c56bd20408565baf39de7c75f06f 2075 SMART SM00490 1681 1771 0.0021 T 22-04-2016 IPR001650 Helicase, C-terminal SII_RS01340 5d50163c227935f5a41aa3b312207db1 586 SUPERFAMILY SSF52540 131 267 1.75E-7 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS01340 5d50163c227935f5a41aa3b312207db1 586 PANTHER PTHR37291:SF1 353 569 3.2E-54 T 22-04-2016 SII_RS01340 5d50163c227935f5a41aa3b312207db1 586 PANTHER PTHR37291:SF1 161 316 3.2E-54 T 22-04-2016 SII_RS01340 5d50163c227935f5a41aa3b312207db1 586 Pfam PF07728 AAA domain (dynein-related subfamily) 399 477 1.2E-5 T 22-04-2016 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 SII_RS01340 5d50163c227935f5a41aa3b312207db1 586 Pfam PF07728 AAA domain (dynein-related subfamily) 163 220 2.6E-5 T 22-04-2016 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 SII_RS01340 5d50163c227935f5a41aa3b312207db1 586 Gene3D G3DSA:3.40.50.300 398 477 2.0E-19 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS01340 5d50163c227935f5a41aa3b312207db1 586 Gene3D G3DSA:3.40.50.300 121 203 2.0E-19 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS01340 5d50163c227935f5a41aa3b312207db1 586 SMART SM00382 160 486 2.2E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain SII_RS01340 5d50163c227935f5a41aa3b312207db1 586 SUPERFAMILY SSF52540 160 185 2.15E-14 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS01340 5d50163c227935f5a41aa3b312207db1 586 SUPERFAMILY SSF52540 380 486 2.15E-14 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS01340 5d50163c227935f5a41aa3b312207db1 586 PANTHER PTHR37291 353 569 3.2E-54 T 22-04-2016 SII_RS01340 5d50163c227935f5a41aa3b312207db1 586 PANTHER PTHR37291 161 316 3.2E-54 T 22-04-2016 SII_RS07490 d279da006167df6bd32abdb97805ccc2 552 PANTHER PTHR34976:SF1 2 202 2.6E-22 T 22-04-2016 SII_RS07490 d279da006167df6bd32abdb97805ccc2 552 Pfam PF04740 LXG domain of WXG superfamily 5 196 3.9E-8 T 22-04-2016 IPR006829 LXG domain SII_RS07490 d279da006167df6bd32abdb97805ccc2 552 PANTHER PTHR34976 2 202 2.6E-22 T 22-04-2016 SII_RS08085 a4971ee04b32c7e17078bd59c3760961 833 PRINTS PR00985 Leucyl-tRNA synthetase signature 215 234 7.9E-55 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 SII_RS08085 a4971ee04b32c7e17078bd59c3760961 833 PRINTS PR00985 Leucyl-tRNA synthetase signature 153 169 7.9E-55 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 SII_RS08085 a4971ee04b32c7e17078bd59c3760961 833 PRINTS PR00985 Leucyl-tRNA synthetase signature 486 504 7.9E-55 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 SII_RS08085 a4971ee04b32c7e17078bd59c3760961 833 PRINTS PR00985 Leucyl-tRNA synthetase signature 525 547 7.9E-55 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 SII_RS08085 a4971ee04b32c7e17078bd59c3760961 833 PRINTS PR00985 Leucyl-tRNA synthetase signature 558 568 7.9E-55 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 SII_RS08085 a4971ee04b32c7e17078bd59c3760961 833 PRINTS PR00985 Leucyl-tRNA synthetase signature 186 199 7.9E-55 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 SII_RS08085 a4971ee04b32c7e17078bd59c3760961 833 PRINTS PR00985 Leucyl-tRNA synthetase signature 127 144 7.9E-55 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 SII_RS08085 a4971ee04b32c7e17078bd59c3760961 833 PANTHER PTHR11946:SF7 609 832 0.0 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 SII_RS08085 a4971ee04b32c7e17078bd59c3760961 833 PANTHER PTHR11946:SF7 240 265 0.0 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 SII_RS08085 a4971ee04b32c7e17078bd59c3760961 833 PANTHER PTHR11946:SF7 4 207 0.0 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 SII_RS08085 a4971ee04b32c7e17078bd59c3760961 833 PANTHER PTHR11946:SF7 471 575 0.0 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 SII_RS08085 a4971ee04b32c7e17078bd59c3760961 833 PANTHER PTHR11946:SF7 288 453 0.0 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 SII_RS08085 a4971ee04b32c7e17078bd59c3760961 833 Pfam PF09334 tRNA synthetases class I (M) 40 163 3.7E-17 T 22-04-2016 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SII_RS08085 a4971ee04b32c7e17078bd59c3760961 833 SUPERFAMILY SSF47323 653 833 3.36E-31 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SII_RS08085 a4971ee04b32c7e17078bd59c3760961 833 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 609 636 1.3E-6 T 22-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SII_RS08085 a4971ee04b32c7e17078bd59c3760961 833 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 414 571 4.6E-5 T 22-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SII_RS08085 a4971ee04b32c7e17078bd59c3760961 833 Gene3D G3DSA:3.90.740.10 223 421 1.4E-60 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 SII_RS08085 a4971ee04b32c7e17078bd59c3760961 833 PANTHER PTHR11946 609 832 0.0 T 22-04-2016 SII_RS08085 a4971ee04b32c7e17078bd59c3760961 833 PANTHER PTHR11946 240 265 0.0 T 22-04-2016 SII_RS08085 a4971ee04b32c7e17078bd59c3760961 833 PANTHER PTHR11946 4 207 0.0 T 22-04-2016 SII_RS08085 a4971ee04b32c7e17078bd59c3760961 833 PANTHER PTHR11946 471 575 0.0 T 22-04-2016 SII_RS08085 a4971ee04b32c7e17078bd59c3760961 833 PANTHER PTHR11946 288 453 0.0 T 22-04-2016 SII_RS08085 a4971ee04b32c7e17078bd59c3760961 833 SUPERFAMILY SSF52374 413 658 1.66E-137 T 22-04-2016 SII_RS08085 a4971ee04b32c7e17078bd59c3760961 833 SUPERFAMILY SSF52374 3 226 1.66E-137 T 22-04-2016 SII_RS08085 a4971ee04b32c7e17078bd59c3760961 833 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 4 833 0.0 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 SII_RS08085 a4971ee04b32c7e17078bd59c3760961 833 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 43 53 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SII_RS08085 a4971ee04b32c7e17078bd59c3760961 833 Gene3D G3DSA:1.10.730.10 639 768 1.4E-36 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SII_RS08085 a4971ee04b32c7e17078bd59c3760961 833 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 221 401 1.0E-65 T 22-04-2016 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 SII_RS08085 a4971ee04b32c7e17078bd59c3760961 833 SUPERFAMILY SSF50677 226 412 1.47E-54 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 SII_RS08085 a4971ee04b32c7e17078bd59c3760961 833 Pfam PF08264 Anticodon-binding domain of tRNA 684 794 7.8E-18 T 22-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 SII_RS08085 a4971ee04b32c7e17078bd59c3760961 833 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 3 832 22.551 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 SII_RS08085 a4971ee04b32c7e17078bd59c3760961 833 Gene3D G3DSA:3.40.50.620 3 222 4.8E-159 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SII_RS08085 a4971ee04b32c7e17078bd59c3760961 833 Gene3D G3DSA:3.40.50.620 609 638 4.8E-159 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SII_RS08085 a4971ee04b32c7e17078bd59c3760961 833 Gene3D G3DSA:3.40.50.620 422 574 4.8E-159 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SII_RS06295 2c7f7017bb2c77962dcdea37c26034c5 287 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 6 213 9.4E-64 T 22-04-2016 IPR003740 Uncharacterised membrane protein YitT SII_RS06295 2c7f7017bb2c77962dcdea37c26034c5 287 PIRSF PIRSF006483 1 280 1.0E-84 T 22-04-2016 IPR003740 Uncharacterised membrane protein YitT SII_RS06295 2c7f7017bb2c77962dcdea37c26034c5 287 PANTHER PTHR33545:SF7 3 282 2.9E-133 T 22-04-2016 SII_RS06295 2c7f7017bb2c77962dcdea37c26034c5 287 Pfam PF10035 Uncharacterized protein conserved in bacteria (DUF2179) 219 273 1.6E-21 T 22-04-2016 IPR019264 Domain of unknown function DUF2179 SII_RS06295 2c7f7017bb2c77962dcdea37c26034c5 287 PANTHER PTHR33545 3 282 2.9E-133 T 22-04-2016 SII_RS08390 0d4ae8bc6a8d43d3d0c547a9128efd20 604 SUPERFAMILY SSF56235 2 235 3.09E-63 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SII_RS08390 0d4ae8bc6a8d43d3d0c547a9128efd20 604 Pfam PF13522 Glutamine amidotransferase domain 62 189 8.9E-20 T 22-04-2016 SII_RS08390 0d4ae8bc6a8d43d3d0c547a9128efd20 604 PANTHER PTHR10937:SF0 1 604 8.7E-274 T 22-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 SII_RS08390 0d4ae8bc6a8d43d3d0c547a9128efd20 604 PANTHER PTHR10937 1 604 8.7E-274 T 22-04-2016 SII_RS08390 0d4ae8bc6a8d43d3d0c547a9128efd20 604 Pfam PF01380 SIS domain 290 414 1.3E-25 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 SII_RS08390 0d4ae8bc6a8d43d3d0c547a9128efd20 604 Pfam PF01380 SIS domain 460 584 5.2E-16 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 SII_RS08390 0d4ae8bc6a8d43d3d0c547a9128efd20 604 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 604 37.67 T 22-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 SII_RS08390 0d4ae8bc6a8d43d3d0c547a9128efd20 604 Gene3D G3DSA:3.60.20.10 2 239 1.3E-66 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SII_RS08390 0d4ae8bc6a8d43d3d0c547a9128efd20 604 SUPERFAMILY SSF53697 246 604 1.08E-88 T 22-04-2016 SII_RS08390 0d4ae8bc6a8d43d3d0c547a9128efd20 604 Gene3D G3DSA:3.40.50.10490 443 604 9.3E-56 T 22-04-2016 SII_RS08390 0d4ae8bc6a8d43d3d0c547a9128efd20 604 Gene3D G3DSA:3.40.50.10490 243 442 2.3E-51 T 22-04-2016 SII_RS08390 0d4ae8bc6a8d43d3d0c547a9128efd20 604 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 604 1.4E-208 T 22-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 SII_RS08695 1beb2cb3535a396e9e1e75bafd5acc2d 146 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 144 1.5E-37 T 22-04-2016 IPR021131 Ribosomal protein L18e/L15P SII_RS08695 1beb2cb3535a396e9e1e75bafd5acc2d 146 ProSitePatterns PS00475 Ribosomal protein L15 signature. 110 140 - T 22-04-2016 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SII_RS08695 1beb2cb3535a396e9e1e75bafd5acc2d 146 Gene3D G3DSA:3.100.10.10 32 146 7.2E-42 T 22-04-2016 SII_RS08695 1beb2cb3535a396e9e1e75bafd5acc2d 146 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 146 22.255 T 22-04-2016 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 SII_RS08695 1beb2cb3535a396e9e1e75bafd5acc2d 146 SUPERFAMILY SSF52080 4 143 1.7E-49 T 22-04-2016 IPR021131 Ribosomal protein L18e/L15P SII_RS08695 1beb2cb3535a396e9e1e75bafd5acc2d 146 PANTHER PTHR12934 1 146 3.2E-74 T 22-04-2016 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 SII_RS08695 1beb2cb3535a396e9e1e75bafd5acc2d 146 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 2 143 5.8E-55 T 22-04-2016 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 SII_RS01190 37418b83e83fa95a7822188faf662fe1 204 PANTHER PTHR12383:SF14 8 204 1.7E-49 T 22-04-2016 SII_RS01190 37418b83e83fa95a7822188faf662fe1 204 PANTHER PTHR12383 8 204 1.7E-49 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 SII_RS01190 37418b83e83fa95a7822188faf662fe1 204 Pfam PF00717 Peptidase S24-like 37 105 1.3E-19 T 22-04-2016 IPR019759 Peptidase S24/S26A/S26B SII_RS01190 37418b83e83fa95a7822188faf662fe1 204 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 17 199 9.5E-43 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 SII_RS01190 37418b83e83fa95a7822188faf662fe1 204 SUPERFAMILY SSF51306 29 204 4.97E-49 T 22-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C SII_RS01190 37418b83e83fa95a7822188faf662fe1 204 ProSitePatterns PS00501 Signal peptidases I serine active site. 40 47 - T 22-04-2016 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: REACT_15380 SII_RS01190 37418b83e83fa95a7822188faf662fe1 204 Gene3D G3DSA:2.10.109.10 158 203 1.9E-28 T 22-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain SII_RS01190 37418b83e83fa95a7822188faf662fe1 204 Gene3D G3DSA:2.10.109.10 29 91 1.9E-28 T 22-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain SII_RS01190 37418b83e83fa95a7822188faf662fe1 204 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 158 177 4.1E-18 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 SII_RS01190 37418b83e83fa95a7822188faf662fe1 204 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 31 47 4.1E-18 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 SII_RS01190 37418b83e83fa95a7822188faf662fe1 204 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 81 93 4.1E-18 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 SII_RS01190 37418b83e83fa95a7822188faf662fe1 204 ProSitePatterns PS00760 Signal peptidases I lysine active site. 83 95 - T 22-04-2016 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 SII_RS09315 e5f4781415990977b5035d850ad48a9f 226 Pfam PF16316 Domain of unknown function (DUF4956) 31 147 3.6E-13 T 22-04-2016 IPR032531 Protein of unknown function DUF4956 SII_RS03715 b4e1a6bc174e4ddaddff7e6ce65b5981 77 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 2 74 5.0E-15 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 SII_RS03715 b4e1a6bc174e4ddaddff7e6ce65b5981 77 Pfam PF03840 Preprotein translocase SecG subunit 4 74 1.2E-13 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 SII_RS00765 89876f47bc14a790c533bb4ca67ec339 501 PIRSF PIRSF000538 4 500 8.6E-164 T 22-04-2016 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 SII_RS00765 89876f47bc14a790c533bb4ca67ec339 501 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 363 383 - T 22-04-2016 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 SII_RS00765 89876f47bc14a790c533bb4ca67ec339 501 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 136 148 - T 22-04-2016 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 SII_RS00765 89876f47bc14a790c533bb4ca67ec339 501 PANTHER PTHR10196:SF9 1 495 1.1E-241 T 22-04-2016 SII_RS00765 89876f47bc14a790c533bb4ca67ec339 501 Gene3D G3DSA:3.30.420.40 256 495 1.3E-93 T 22-04-2016 SII_RS00765 89876f47bc14a790c533bb4ca67ec339 501 PANTHER PTHR10196 1 495 1.1E-241 T 22-04-2016 SII_RS00765 89876f47bc14a790c533bb4ca67ec339 501 Gene3D G3DSA:3.30.420.40 2 254 8.7E-104 T 22-04-2016 SII_RS00765 89876f47bc14a790c533bb4ca67ec339 501 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 6 494 3.8E-220 T 22-04-2016 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 SII_RS00765 89876f47bc14a790c533bb4ca67ec339 501 SUPERFAMILY SSF53067 6 255 1.41E-92 T 22-04-2016 SII_RS00765 89876f47bc14a790c533bb4ca67ec339 501 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 263 451 1.2E-54 T 22-04-2016 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 SII_RS00765 89876f47bc14a790c533bb4ca67ec339 501 Hamap MF_00186 Glycerol kinase [glpK]. 4 498 55.809 T 22-04-2016 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 SII_RS00765 89876f47bc14a790c533bb4ca67ec339 501 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 6 253 2.1E-84 T 22-04-2016 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 SII_RS00765 89876f47bc14a790c533bb4ca67ec339 501 SUPERFAMILY SSF53067 256 494 3.76E-78 T 22-04-2016 SII_RS06450 fbe703d417fa1bb69896ac9f797461eb 181 PANTHER PTHR35798 1 181 5.7E-29 T 22-04-2016 SII_RS06450 fbe703d417fa1bb69896ac9f797461eb 181 Pfam PF04472 Protein of unknown function (DUF552) 89 158 2.9E-15 T 22-04-2016 IPR007561 Cell division protein SepF/SepF-related GO:0000917 SII_RS06450 fbe703d417fa1bb69896ac9f797461eb 181 Hamap MF_01197 Cell division protein SepF [sepF]. 4 166 17.344 T 22-04-2016 IPR023052 Cell division protein SepF GO:0090529 SII_RS06450 fbe703d417fa1bb69896ac9f797461eb 181 PANTHER PTHR35798:SF1 1 181 5.7E-29 T 22-04-2016 SII_RS06040 47be80b34691cf5cf5b1dcb94e9fa327 765 Gene3D G3DSA:3.40.50.300 379 666 2.9E-81 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS06040 47be80b34691cf5cf5b1dcb94e9fa327 765 SMART SM00843 701 765 2.5E-33 T 22-04-2016 IPR018541 FtsK gamma domain SII_RS06040 47be80b34691cf5cf5b1dcb94e9fa327 765 SUPERFAMILY SSF46785 701 764 2.72E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SII_RS06040 47be80b34691cf5cf5b1dcb94e9fa327 765 SMART SM00382 439 621 7.2E-5 T 22-04-2016 IPR003593 AAA+ ATPase domain SII_RS06040 47be80b34691cf5cf5b1dcb94e9fa327 765 Pfam PF09397 Ftsk gamma domain 704 763 2.4E-27 T 22-04-2016 IPR018541 FtsK gamma domain SII_RS06040 47be80b34691cf5cf5b1dcb94e9fa327 765 PANTHER PTHR22683 14 762 5.8E-253 T 22-04-2016 SII_RS06040 47be80b34691cf5cf5b1dcb94e9fa327 765 PANTHER PTHR22683:SF41 14 762 5.8E-253 T 22-04-2016 SII_RS06040 47be80b34691cf5cf5b1dcb94e9fa327 765 SUPERFAMILY SSF52540 378 672 2.04E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS06040 47be80b34691cf5cf5b1dcb94e9fa327 765 Pfam PF01580 FtsK/SpoIIIE family 409 600 5.9E-59 T 22-04-2016 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 SII_RS00365 07e8255a9f5aaddc0fbfb601fe9d4449 391 Gene3D G3DSA:3.40.50.10490 1 202 2.1E-78 T 22-04-2016 SII_RS00365 07e8255a9f5aaddc0fbfb601fe9d4449 391 SUPERFAMILY SSF53697 17 379 9.54E-53 T 22-04-2016 SII_RS00365 07e8255a9f5aaddc0fbfb601fe9d4449 391 Gene3D G3DSA:3.40.50.10490 209 382 1.8E-52 T 22-04-2016 SII_RS00365 07e8255a9f5aaddc0fbfb601fe9d4449 391 PANTHER PTHR32502 238 391 5.4E-176 T 22-04-2016 SII_RS00365 07e8255a9f5aaddc0fbfb601fe9d4449 391 PANTHER PTHR32502 1 188 5.4E-176 T 22-04-2016 SII_RS00365 07e8255a9f5aaddc0fbfb601fe9d4449 391 Pfam PF01380 SIS domain 232 322 4.1E-7 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 SII_RS00365 07e8255a9f5aaddc0fbfb601fe9d4449 391 Pfam PF01380 SIS domain 57 194 1.2E-10 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 SII_RS00365 07e8255a9f5aaddc0fbfb601fe9d4449 391 PANTHER PTHR32502:SF3 238 391 5.4E-176 T 22-04-2016 SII_RS00365 07e8255a9f5aaddc0fbfb601fe9d4449 391 PANTHER PTHR32502:SF3 1 188 5.4E-176 T 22-04-2016 SII_RS01230 471569512c25212556c045430f79e62b 284 SUPERFAMILY SSF50182 119 185 1.34E-11 T 22-04-2016 IPR010920 LSM domain SII_RS01230 471569512c25212556c045430f79e62b 284 SUPERFAMILY SSF82861 29 117 1.28E-15 T 22-04-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 SII_RS01230 471569512c25212556c045430f79e62b 284 Gene3D G3DSA:2.30.30.60 135 181 1.8E-11 T 22-04-2016 SII_RS01230 471569512c25212556c045430f79e62b 284 Pfam PF00924 Mechanosensitive ion channel 76 270 2.3E-39 T 22-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 SII_RS01230 471569512c25212556c045430f79e62b 284 PANTHER PTHR30460 10 278 2.4E-80 T 22-04-2016 SII_RS01230 471569512c25212556c045430f79e62b 284 SUPERFAMILY SSF82689 186 278 1.7E-6 T 22-04-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 SII_RS00865 02791b4c4cba34aa1b3c6aa0dea1ea4d 1474 PANTHER PTHR22683 183 886 3.2E-255 T 22-04-2016 SII_RS00865 02791b4c4cba34aa1b3c6aa0dea1ea4d 1474 PANTHER PTHR22683 1380 1470 3.2E-255 T 22-04-2016 SII_RS00865 02791b4c4cba34aa1b3c6aa0dea1ea4d 1474 PANTHER PTHR22683 1065 1346 3.2E-255 T 22-04-2016 SII_RS00865 02791b4c4cba34aa1b3c6aa0dea1ea4d 1474 SUPERFAMILY SSF52540 622 879 7.83E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS00865 02791b4c4cba34aa1b3c6aa0dea1ea4d 1474 TIGRFAM TIGR03928 T7_EssCb_Firm: type VII secretion protein EssC 194 1471 0.0 T 22-04-2016 IPR023839 Firmicutes EssC, C-terminal SII_RS00865 02791b4c4cba34aa1b3c6aa0dea1ea4d 1474 Gene3D G3DSA:3.40.50.300 988 1180 2.1E-8 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS00865 02791b4c4cba34aa1b3c6aa0dea1ea4d 1474 Gene3D G3DSA:3.40.50.300 635 857 2.0E-29 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS00865 02791b4c4cba34aa1b3c6aa0dea1ea4d 1474 SUPERFAMILY SSF52540 978 1191 1.22E-13 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS00865 02791b4c4cba34aa1b3c6aa0dea1ea4d 1474 Pfam PF01580 FtsK/SpoIIIE family 630 818 1.6E-25 T 22-04-2016 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 SII_RS00865 02791b4c4cba34aa1b3c6aa0dea1ea4d 1474 Pfam PF01580 FtsK/SpoIIIE family 982 1177 9.8E-24 T 22-04-2016 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 SII_RS00865 02791b4c4cba34aa1b3c6aa0dea1ea4d 1474 PANTHER PTHR22683:SF1 183 886 3.2E-255 T 22-04-2016 SII_RS00865 02791b4c4cba34aa1b3c6aa0dea1ea4d 1474 PANTHER PTHR22683:SF1 1380 1470 3.2E-255 T 22-04-2016 SII_RS00865 02791b4c4cba34aa1b3c6aa0dea1ea4d 1474 PANTHER PTHR22683:SF1 1065 1346 3.2E-255 T 22-04-2016 SII_RS02340 399bcb7150149cf88a6c0c4a52c30e9e 1226 Gene3D G3DSA:3.40.50.300 123 264 1.6E-31 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS02340 399bcb7150149cf88a6c0c4a52c30e9e 1226 Gene3D G3DSA:3.40.50.300 28 91 1.6E-31 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS02340 399bcb7150149cf88a6c0c4a52c30e9e 1226 Gene3D G3DSA:3.40.50.300 298 471 3.7E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS02340 399bcb7150149cf88a6c0c4a52c30e9e 1226 Gene3D G3DSA:3.40.50.300 786 945 6.0E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS02340 399bcb7150149cf88a6c0c4a52c30e9e 1226 Gene3D G3DSA:3.40.50.300 483 609 6.0E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS02340 399bcb7150149cf88a6c0c4a52c30e9e 1226 Gene3D G3DSA:1.10.486.10 620 775 6.7E-18 T 22-04-2016 SII_RS02340 399bcb7150149cf88a6c0c4a52c30e9e 1226 PANTHER PTHR11070 29 205 2.2E-291 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 SII_RS02340 399bcb7150149cf88a6c0c4a52c30e9e 1226 PANTHER PTHR11070 556 759 2.2E-291 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 SII_RS02340 399bcb7150149cf88a6c0c4a52c30e9e 1226 PANTHER PTHR11070 337 531 2.2E-291 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 SII_RS02340 399bcb7150149cf88a6c0c4a52c30e9e 1226 PANTHER PTHR11070 776 838 2.2E-291 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 SII_RS02340 399bcb7150149cf88a6c0c4a52c30e9e 1226 PANTHER PTHR11070 883 1216 2.2E-291 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 SII_RS02340 399bcb7150149cf88a6c0c4a52c30e9e 1226 SUPERFAMILY SSF52980 1018 1205 2.25E-21 T 22-04-2016 IPR011335 Restriction endonuclease type II-like SII_RS02340 399bcb7150149cf88a6c0c4a52c30e9e 1226 Pfam PF00580 UvrD/REP helicase N-terminal domain 29 469 4.3E-83 T 22-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 SII_RS02340 399bcb7150149cf88a6c0c4a52c30e9e 1226 Hamap MF_01451 ATP-dependent helicase/nuclease subunit A [addA]. 25 1223 16.503 T 22-04-2016 IPR014152 DNA helicase subunit AddA GO:0004003|GO:0006302 SII_RS02340 399bcb7150149cf88a6c0c4a52c30e9e 1226 PANTHER PTHR11070:SF14 29 205 2.2E-291 T 22-04-2016 SII_RS02340 399bcb7150149cf88a6c0c4a52c30e9e 1226 PANTHER PTHR11070:SF14 556 759 2.2E-291 T 22-04-2016 SII_RS02340 399bcb7150149cf88a6c0c4a52c30e9e 1226 PANTHER PTHR11070:SF14 337 531 2.2E-291 T 22-04-2016 SII_RS02340 399bcb7150149cf88a6c0c4a52c30e9e 1226 PANTHER PTHR11070:SF14 776 838 2.2E-291 T 22-04-2016 SII_RS02340 399bcb7150149cf88a6c0c4a52c30e9e 1226 PANTHER PTHR11070:SF14 883 1216 2.2E-291 T 22-04-2016 SII_RS02340 399bcb7150149cf88a6c0c4a52c30e9e 1226 Pfam PF12705 PD-(D/E)XK nuclease superfamily 1067 1204 2.5E-7 T 22-04-2016 SII_RS02340 399bcb7150149cf88a6c0c4a52c30e9e 1226 Pfam PF13361 UvrD-like helicase C-terminal domain 479 904 2.8E-30 T 22-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 SII_RS02340 399bcb7150149cf88a6c0c4a52c30e9e 1226 SUPERFAMILY SSF52540 362 829 2.79E-110 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS02340 399bcb7150149cf88a6c0c4a52c30e9e 1226 SUPERFAMILY SSF52540 27 203 2.79E-110 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS02340 399bcb7150149cf88a6c0c4a52c30e9e 1226 SUPERFAMILY SSF52540 884 910 2.79E-110 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS02340 399bcb7150149cf88a6c0c4a52c30e9e 1226 TIGRFAM TIGR02785 addA_Gpos: helicase-exonuclease AddAB, AddA subunit 28 1221 0.0 T 22-04-2016 IPR014152 DNA helicase subunit AddA GO:0004003|GO:0006302 SII_RS02340 399bcb7150149cf88a6c0c4a52c30e9e 1226 Gene3D G3DSA:3.90.320.10 1062 1205 3.0E-12 T 22-04-2016 IPR011604 Exonuclease, phage-type/RecB, C-terminal GO:0003677|GO:0004518 SII_RS05350 5783db0720e6b2d9b8a8aa29e7c36017 510 PANTHER PTHR30177:SF4 274 508 3.6E-187 T 22-04-2016 SII_RS05350 5783db0720e6b2d9b8a8aa29e7c36017 510 PANTHER PTHR30177:SF4 1 202 3.6E-187 T 22-04-2016 SII_RS05350 5783db0720e6b2d9b8a8aa29e7c36017 510 Gene3D G3DSA:1.10.3720.10 8 198 9.1E-34 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SII_RS05350 5783db0720e6b2d9b8a8aa29e7c36017 510 PANTHER PTHR30177 274 508 3.6E-187 T 22-04-2016 SII_RS05350 5783db0720e6b2d9b8a8aa29e7c36017 510 PANTHER PTHR30177 1 202 3.6E-187 T 22-04-2016 SII_RS05350 5783db0720e6b2d9b8a8aa29e7c36017 510 SUPERFAMILY SSF53850 240 507 5.7E-64 T 22-04-2016 SII_RS05350 5783db0720e6b2d9b8a8aa29e7c36017 510 Gene3D G3DSA:3.40.190.10 239 350 5.5E-34 T 22-04-2016 SII_RS05350 5783db0720e6b2d9b8a8aa29e7c36017 510 Gene3D G3DSA:3.40.190.10 450 509 5.0E-16 T 22-04-2016 SII_RS05350 5783db0720e6b2d9b8a8aa29e7c36017 510 SUPERFAMILY SSF161098 12 198 4.06E-38 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SII_RS05350 5783db0720e6b2d9b8a8aa29e7c36017 510 Gene3D G3DSA:3.40.190.120 351 445 3.6E-37 T 22-04-2016 SII_RS05350 5783db0720e6b2d9b8a8aa29e7c36017 510 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 37 205 4.9E-20 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SII_RS05350 5783db0720e6b2d9b8a8aa29e7c36017 510 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 241 502 1.4E-61 T 22-04-2016 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 SII_RS09095 dfdc7a460ad82e42d25a2689927a604f 280 PANTHER PTHR32243 3 280 2.1E-196 T 22-04-2016 SII_RS09095 dfdc7a460ad82e42d25a2689927a604f 280 Gene3D G3DSA:1.10.3720.10 6 267 2.7E-58 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SII_RS09095 dfdc7a460ad82e42d25a2689927a604f 280 SUPERFAMILY SSF161098 8 280 3.36E-60 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SII_RS09095 dfdc7a460ad82e42d25a2689927a604f 280 PANTHER PTHR32243:SF41 3 280 2.1E-196 T 22-04-2016 SII_RS09095 dfdc7a460ad82e42d25a2689927a604f 280 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 92 273 1.6E-21 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SII_RS01945 894009547fc7dc251652331286c053e1 201 Gene3D G3DSA:3.20.80.10 1 201 3.2E-81 T 22-04-2016 IPR011256 Regulatory factor, effector binding domain SII_RS01945 894009547fc7dc251652331286c053e1 201 Pfam PF06445 GyrI-like small molecule binding domain 19 199 6.3E-27 T 22-04-2016 IPR029442 GyrI-like small molecule binding domain SII_RS01945 894009547fc7dc251652331286c053e1 201 PIRSF PIRSF031644 1 201 1.6E-81 T 22-04-2016 IPR008319 Uncharacterised conserved protein UCP031644 SII_RS04685 d140b8ae1397e04c955bc06b87f52899 157 PANTHER PTHR33695 1 157 2.2E-46 T 22-04-2016 SII_RS04685 d140b8ae1397e04c955bc06b87f52899 157 ProSitePatterns PS00855 Signal peptidases II signature. 96 108 - T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 SII_RS04685 d140b8ae1397e04c955bc06b87f52899 157 TIGRFAM TIGR00077 lspA: signal peptidase II 5 151 5.0E-36 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 SII_RS04685 d140b8ae1397e04c955bc06b87f52899 157 Pfam PF01252 Signal peptidase (SPase) II 10 146 1.6E-33 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 SII_RS04685 d140b8ae1397e04c955bc06b87f52899 157 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 127 143 3.6E-17 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 SII_RS04685 d140b8ae1397e04c955bc06b87f52899 157 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 93 108 3.6E-17 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 SII_RS04685 d140b8ae1397e04c955bc06b87f52899 157 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 49 57 3.6E-17 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 SII_RS04685 d140b8ae1397e04c955bc06b87f52899 157 PANTHER PTHR33695:SF1 1 157 2.2E-46 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 SII_RS04685 d140b8ae1397e04c955bc06b87f52899 157 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 2 152 15.897 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 SII_RS05665 6a169f12c8ed3db4224c10004a8ba0bf 218 SUPERFAMILY SSF52172 1 172 2.56E-36 T 22-04-2016 IPR011006 CheY-like superfamily SII_RS05665 6a169f12c8ed3db4224c10004a8ba0bf 218 SMART SM00862 143 213 1.3E-17 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SII_RS05665 6a169f12c8ed3db4224c10004a8ba0bf 218 PANTHER PTHR26402:SF50 2 213 1.4E-63 T 22-04-2016 SII_RS05665 6a169f12c8ed3db4224c10004a8ba0bf 218 SMART SM00448 2 112 1.4E-36 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SII_RS05665 6a169f12c8ed3db4224c10004a8ba0bf 218 Gene3D G3DSA:1.10.10.10 122 213 1.3E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SII_RS05665 6a169f12c8ed3db4224c10004a8ba0bf 218 PANTHER PTHR26402 2 213 1.4E-63 T 22-04-2016 SII_RS05665 6a169f12c8ed3db4224c10004a8ba0bf 218 Pfam PF00072 Response regulator receiver domain 4 112 1.9E-25 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SII_RS05665 6a169f12c8ed3db4224c10004a8ba0bf 218 Gene3D G3DSA:3.40.50.2300 2 121 1.4E-36 T 22-04-2016 SII_RS05665 6a169f12c8ed3db4224c10004a8ba0bf 218 Pfam PF00486 Transcriptional regulatory protein, C terminal 144 213 1.4E-17 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SII_RS01965 aca55cc36aeda6b774736b4a0d9eec9e 710 SUPERFAMILY SSF52540 4 163 2.92E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS01965 aca55cc36aeda6b774736b4a0d9eec9e 710 TIGRFAM TIGR00437 feoB: ferrous iron transport protein B 8 634 3.0E-166 T 22-04-2016 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 SII_RS01965 aca55cc36aeda6b774736b4a0d9eec9e 710 Gene3D G3DSA:3.40.50.300 4 165 8.5E-32 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS01965 aca55cc36aeda6b774736b4a0d9eec9e 710 Pfam PF07670 Nucleoside recognition 511 633 2.2E-28 T 22-04-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: REACT_15518|Reactome: REACT_1698 SII_RS01965 aca55cc36aeda6b774736b4a0d9eec9e 710 Pfam PF07670 Nucleoside recognition 350 444 9.9E-13 T 22-04-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: REACT_15518|Reactome: REACT_1698 SII_RS01965 aca55cc36aeda6b774736b4a0d9eec9e 710 PANTHER PTHR11649 3 143 4.1E-237 T 22-04-2016 SII_RS01965 aca55cc36aeda6b774736b4a0d9eec9e 710 PANTHER PTHR11649 259 671 4.1E-237 T 22-04-2016 SII_RS01965 aca55cc36aeda6b774736b4a0d9eec9e 710 Pfam PF07664 Ferrous iron transport protein B C terminus 454 505 1.4E-15 T 22-04-2016 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 SII_RS01965 aca55cc36aeda6b774736b4a0d9eec9e 710 Pfam PF02421 Ferrous iron transport protein B 3 156 1.8E-64 T 22-04-2016 IPR011619 Ferrous iron transport protein B, N-terminal GO:0005525|GO:0015093|GO:0015684|GO:0016021 SII_RS01965 aca55cc36aeda6b774736b4a0d9eec9e 710 PANTHER PTHR11649:SF37 3 143 4.1E-237 T 22-04-2016 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 SII_RS01965 aca55cc36aeda6b774736b4a0d9eec9e 710 PANTHER PTHR11649:SF37 259 671 4.1E-237 T 22-04-2016 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 SII_RS02540 27c10270351712f7fc5277ce8075378a 801 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 801 8.4E-249 T 22-04-2016 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 SII_RS02540 27c10270351712f7fc5277ce8075378a 801 Gene3D G3DSA:3.30.56.10 160 189 1.6E-24 T 22-04-2016 SII_RS02540 27c10270351712f7fc5277ce8075378a 801 Gene3D G3DSA:3.30.56.10 1 38 1.6E-24 T 22-04-2016 SII_RS02540 27c10270351712f7fc5277ce8075378a 801 Gene3D G3DSA:3.30.930.10 493 695 5.1E-62 T 22-04-2016 SII_RS02540 27c10270351712f7fc5277ce8075378a 801 Gene3D G3DSA:3.50.40.10 208 399 7.0E-74 T 22-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 SII_RS02540 27c10270351712f7fc5277ce8075378a 801 SUPERFAMILY SSF46955 412 480 4.21E-18 T 22-04-2016 IPR009061 Putative DNA-binding domain SII_RS02540 27c10270351712f7fc5277ce8075378a 801 SUPERFAMILY SSF54991 704 801 4.71E-28 T 22-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 SII_RS02540 27c10270351712f7fc5277ce8075378a 801 Pfam PF03147 Ferredoxin-fold anticodon binding domain 709 801 3.3E-26 T 22-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 SII_RS02540 27c10270351712f7fc5277ce8075378a 801 Gene3D G3DSA:3.30.70.380 710 801 2.4E-28 T 22-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 SII_RS02540 27c10270351712f7fc5277ce8075378a 801 Pfam PF03484 tRNA synthetase B5 domain 414 476 2.0E-17 T 22-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 SII_RS02540 27c10270351712f7fc5277ce8075378a 801 SMART SM00896 708 801 5.2E-37 T 22-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 SII_RS02540 27c10270351712f7fc5277ce8075378a 801 SUPERFAMILY SSF56037 209 401 2.25E-64 T 22-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 SII_RS02540 27c10270351712f7fc5277ce8075378a 801 Pfam PF01588 Putative tRNA binding domain 45 132 2.8E-19 T 22-04-2016 IPR002547 tRNA-binding domain GO:0000049 Reactome: REACT_71 SII_RS02540 27c10270351712f7fc5277ce8075378a 801 SMART SM00874 408 476 7.5E-25 T 22-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 SII_RS02540 27c10270351712f7fc5277ce8075378a 801 Gene3D G3DSA:3.30.56.20 409 480 4.8E-24 T 22-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 SII_RS02540 27c10270351712f7fc5277ce8075378a 801 Gene3D G3DSA:2.40.50.140 41 159 3.1E-42 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SII_RS02540 27c10270351712f7fc5277ce8075378a 801 SMART SM00873 218 391 8.3E-80 T 22-04-2016 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 SII_RS02540 27c10270351712f7fc5277ce8075378a 801 PANTHER PTHR10947:SF0 2 801 3.6E-286 T 22-04-2016 SII_RS02540 27c10270351712f7fc5277ce8075378a 801 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 795 44.38 T 22-04-2016 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 SII_RS02540 27c10270351712f7fc5277ce8075378a 801 SUPERFAMILY SSF55681 472 694 3.18E-47 T 22-04-2016 SII_RS02540 27c10270351712f7fc5277ce8075378a 801 PANTHER PTHR10947 2 801 3.6E-286 T 22-04-2016 SII_RS02540 27c10270351712f7fc5277ce8075378a 801 Pfam PF03483 B3/4 domain 219 391 3.3E-62 T 22-04-2016 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 SII_RS02540 27c10270351712f7fc5277ce8075378a 801 SUPERFAMILY SSF50249 38 197 6.86E-41 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SII_RS05765 40691c63beb81b9404233a044e06aba1 872 SUPERFAMILY SSF101353 249 443 5.62E-67 T 22-04-2016 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7|Reactome: REACT_71 SII_RS05765 40691c63beb81b9404233a044e06aba1 872 PANTHER PTHR11777 1 870 0.0 T 22-04-2016 SII_RS05765 40691c63beb81b9404233a044e06aba1 872 SMART SM00863 656 699 2.5E-21 T 22-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 SII_RS05765 40691c63beb81b9404233a044e06aba1 872 PRINTS PR00980 Alanyl-tRNA synthetase signature 229 242 5.1E-29 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 SII_RS05765 40691c63beb81b9404233a044e06aba1 872 PRINTS PR00980 Alanyl-tRNA synthetase signature 302 315 5.1E-29 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 SII_RS05765 40691c63beb81b9404233a044e06aba1 872 PRINTS PR00980 Alanyl-tRNA synthetase signature 73 84 5.1E-29 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 SII_RS05765 40691c63beb81b9404233a044e06aba1 872 PRINTS PR00980 Alanyl-tRNA synthetase signature 278 294 5.1E-29 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 SII_RS05765 40691c63beb81b9404233a044e06aba1 872 PRINTS PR00980 Alanyl-tRNA synthetase signature 199 210 5.1E-29 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 SII_RS05765 40691c63beb81b9404233a044e06aba1 872 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 8 855 1.4E-292 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 SII_RS05765 40691c63beb81b9404233a044e06aba1 872 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 656 698 1.5E-19 T 22-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 SII_RS05765 40691c63beb81b9404233a044e06aba1 872 SUPERFAMILY SSF55186 555 710 7.19E-53 T 22-04-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 SII_RS05765 40691c63beb81b9404233a044e06aba1 872 Pfam PF02272 DHHA1 domain 804 868 8.0E-12 T 22-04-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7 SII_RS05765 40691c63beb81b9404233a044e06aba1 872 Gene3D G3DSA:3.30.930.10 4 244 1.6E-87 T 22-04-2016 SII_RS05765 40691c63beb81b9404233a044e06aba1 872 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 872 168.754 T 22-04-2016 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 SII_RS05765 40691c63beb81b9404233a044e06aba1 872 SUPERFAMILY SSF55681 5 248 9.69E-80 T 22-04-2016 SII_RS05765 40691c63beb81b9404233a044e06aba1 872 SUPERFAMILY SSF50447 459 551 3.88E-13 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain SII_RS05765 40691c63beb81b9404233a044e06aba1 872 PANTHER PTHR11777:SF9 1 870 0.0 T 22-04-2016 SII_RS05765 40691c63beb81b9404233a044e06aba1 872 Pfam PF01411 tRNA synthetases class II (A) 8 559 1.4E-184 T 22-04-2016 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 SII_RS03140 a48f900a02a7a84bbc9a3450220e62fc 122 SUPERFAMILY SSF48300 3 51 8.76E-14 T 22-04-2016 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 SII_RS03140 a48f900a02a7a84bbc9a3450220e62fc 122 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 56 122 4.5E-29 T 22-04-2016 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 SII_RS03140 a48f900a02a7a84bbc9a3450220e62fc 122 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 2 122 24.101 T 22-04-2016 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SII_RS03140 a48f900a02a7a84bbc9a3450220e62fc 122 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 122 6.3E-45 T 22-04-2016 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SII_RS03140 a48f900a02a7a84bbc9a3450220e62fc 122 Gene3D G3DSA:1.20.5.710 2 52 7.0E-21 T 22-04-2016 SII_RS03140 a48f900a02a7a84bbc9a3450220e62fc 122 SUPERFAMILY SSF54736 56 122 5.23E-23 T 22-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like SII_RS03140 a48f900a02a7a84bbc9a3450220e62fc 122 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 5 51 4.2E-19 T 22-04-2016 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 SII_RS03140 a48f900a02a7a84bbc9a3450220e62fc 122 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 57 93 3.0E-12 T 22-04-2016 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 SII_RS03140 a48f900a02a7a84bbc9a3450220e62fc 122 Gene3D G3DSA:3.30.1390.10 53 122 4.0E-31 T 22-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like SII_RS05340 a441097156f1a68fae1e935cc5cb679f 631 PRINTS PR01217 Proline rich extensin signature 189 205 7.6E-10 T 22-04-2016 SII_RS05340 a441097156f1a68fae1e935cc5cb679f 631 PRINTS PR01217 Proline rich extensin signature 212 224 7.6E-10 T 22-04-2016 SII_RS05340 a441097156f1a68fae1e935cc5cb679f 631 PRINTS PR01217 Proline rich extensin signature 278 295 7.6E-10 T 22-04-2016 SII_RS05340 a441097156f1a68fae1e935cc5cb679f 631 PRINTS PR01217 Proline rich extensin signature 249 265 7.6E-10 T 22-04-2016 SII_RS05340 a441097156f1a68fae1e935cc5cb679f 631 PRINTS PR01217 Proline rich extensin signature 226 247 7.6E-10 T 22-04-2016 SII_RS02480 31751497b58e48d2f60f04a2a12b4c59 322 PANTHER PTHR22912 1 312 2.2E-140 T 22-04-2016 SII_RS02480 31751497b58e48d2f60f04a2a12b4c59 322 Gene3D G3DSA:3.50.50.60 128 241 1.4E-14 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SII_RS02480 31751497b58e48d2f60f04a2a12b4c59 322 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 292 6.0E-32 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SII_RS02480 31751497b58e48d2f60f04a2a12b4c59 322 Gene3D G3DSA:3.50.50.60 242 320 1.1E-45 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SII_RS02480 31751497b58e48d2f60f04a2a12b4c59 322 Gene3D G3DSA:3.50.50.60 2 123 1.1E-45 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SII_RS02480 31751497b58e48d2f60f04a2a12b4c59 322 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 233 249 4.4E-20 T 22-04-2016 SII_RS02480 31751497b58e48d2f60f04a2a12b4c59 322 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 108 126 4.4E-20 T 22-04-2016 SII_RS02480 31751497b58e48d2f60f04a2a12b4c59 322 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 259 281 4.4E-20 T 22-04-2016 SII_RS02480 31751497b58e48d2f60f04a2a12b4c59 322 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 150 168 4.4E-20 T 22-04-2016 SII_RS02480 31751497b58e48d2f60f04a2a12b4c59 322 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 4.4E-20 T 22-04-2016 SII_RS02480 31751497b58e48d2f60f04a2a12b4c59 322 Hamap MF_01685 Ferredoxin--NADP reductase. 4 322 40.412 T 22-04-2016 IPR022890 Ferredoxin--NADP reductase, type 2 GO:0004324|GO:0055114 KEGG: 00195+1.18.1.2|MetaCyc: PWY-101|MetaCyc: PWY-7230 SII_RS02480 31751497b58e48d2f60f04a2a12b4c59 322 PANTHER PTHR22912:SF158 1 312 2.2E-140 T 22-04-2016 SII_RS02480 31751497b58e48d2f60f04a2a12b4c59 322 SUPERFAMILY SSF51905 3 159 1.71E-38 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SII_RS02480 31751497b58e48d2f60f04a2a12b4c59 322 SUPERFAMILY SSF51905 236 309 1.71E-38 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SII_RS02480 31751497b58e48d2f60f04a2a12b4c59 322 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 109 117 6.6E-24 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SII_RS02480 31751497b58e48d2f60f04a2a12b4c59 322 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 63 73 6.6E-24 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SII_RS02480 31751497b58e48d2f60f04a2a12b4c59 322 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 6 28 6.6E-24 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SII_RS02480 31751497b58e48d2f60f04a2a12b4c59 322 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 146 170 6.6E-24 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SII_RS02480 31751497b58e48d2f60f04a2a12b4c59 322 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 269 287 6.6E-24 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SII_RS02480 31751497b58e48d2f60f04a2a12b4c59 322 SUPERFAMILY SSF51905 121 238 6.04E-11 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SII_RS06480 714d3f832c3d5c926bb3ab541cf7e40b 450 SUPERFAMILY SSF53623 103 307 3.53E-53 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SII_RS06480 714d3f832c3d5c926bb3ab541cf7e40b 450 Pfam PF02875 Mur ligase family, glutamate ligase domain 310 382 5.7E-11 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SII_RS06480 714d3f832c3d5c926bb3ab541cf7e40b 450 Pfam PF08245 Mur ligase middle domain 117 289 5.0E-34 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SII_RS06480 714d3f832c3d5c926bb3ab541cf7e40b 450 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 10 448 35.702 T 22-04-2016 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SII_RS06480 714d3f832c3d5c926bb3ab541cf7e40b 450 SUPERFAMILY SSF51984 10 100 6.67E-18 T 22-04-2016 SII_RS06480 714d3f832c3d5c926bb3ab541cf7e40b 450 PANTHER PTHR23135:SF2 1 450 1.4E-163 T 22-04-2016 SII_RS06480 714d3f832c3d5c926bb3ab541cf7e40b 450 PANTHER PTHR23135 1 450 1.4E-163 T 22-04-2016 SII_RS06480 714d3f832c3d5c926bb3ab541cf7e40b 450 Gene3D G3DSA:3.40.1190.10 86 125 6.9E-11 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SII_RS06480 714d3f832c3d5c926bb3ab541cf7e40b 450 Gene3D G3DSA:3.40.50.720 6 85 1.5E-18 T 22-04-2016 IPR016040 NAD(P)-binding domain SII_RS06480 714d3f832c3d5c926bb3ab541cf7e40b 450 Gene3D G3DSA:3.40.1190.10 126 312 8.6E-51 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SII_RS06480 714d3f832c3d5c926bb3ab541cf7e40b 450 SUPERFAMILY SSF53244 309 448 1.83E-38 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SII_RS06480 714d3f832c3d5c926bb3ab541cf7e40b 450 Gene3D G3DSA:3.90.190.20 313 445 1.8E-43 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SII_RS06480 714d3f832c3d5c926bb3ab541cf7e40b 450 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 11 446 1.5E-123 T 22-04-2016 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SII_RS06475 c311eefa0a3a0d3b046a2802d7dd20c5 356 Gene3D G3DSA:3.40.50.2000 1 187 8.6E-54 T 22-04-2016 SII_RS06475 c311eefa0a3a0d3b046a2802d7dd20c5 356 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 4 143 2.9E-38 T 22-04-2016 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 SII_RS06475 c311eefa0a3a0d3b046a2802d7dd20c5 356 PANTHER PTHR21015 1 352 3.8E-160 T 22-04-2016 SII_RS06475 c311eefa0a3a0d3b046a2802d7dd20c5 356 Gene3D G3DSA:3.40.50.2000 188 334 6.4E-32 T 22-04-2016 SII_RS06475 c311eefa0a3a0d3b046a2802d7dd20c5 356 PANTHER PTHR21015:SF27 1 352 3.8E-160 T 22-04-2016 SII_RS06475 c311eefa0a3a0d3b046a2802d7dd20c5 356 SUPERFAMILY SSF53756 2 342 4.45E-79 T 22-04-2016 SII_RS06475 c311eefa0a3a0d3b046a2802d7dd20c5 356 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 4 351 23.199 T 22-04-2016 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 SII_RS06475 c311eefa0a3a0d3b046a2802d7dd20c5 356 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 188 339 3.3E-29 T 22-04-2016 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 SII_RS07325 653d09c72439d5b5a545c1aa0428e5f7 378 Pfam PF11611 Domain of unknown function (DUF4352) 30 141 2.1E-12 T 22-04-2016 IPR029051 Domain of unknown function DUF4352 SII_RS07325 653d09c72439d5b5a545c1aa0428e5f7 378 Gene3D G3DSA:2.60.40.1240 30 174 1.7E-18 T 22-04-2016 IPR029050 Immunoprotective extracellular, immunoglobulin-like domain SII_RS07325 653d09c72439d5b5a545c1aa0428e5f7 378 Pfam PF17118 Domain of unknown function (DUF5105) 199 373 1.1E-13 T 22-04-2016 IPR031343 Domain of unknown function DUF5105 SII_RS08335 d87719e1017f229a7fcd9c96bbd2de29 486 PANTHER PTHR33843 2 422 2.2E-116 T 22-04-2016 SII_RS08335 d87719e1017f229a7fcd9c96bbd2de29 486 Pfam PF03611 PTS system sugar-specific permease component 14 421 7.0E-114 T 22-04-2016 IPR004703 Phosphotransferase system, sugar-specific permease component GO:0009401|GO:0016021 SII_RS08335 d87719e1017f229a7fcd9c96bbd2de29 486 PANTHER PTHR33843:SF5 2 422 2.2E-116 T 22-04-2016 SII_RS09000 58e79e95ae0c46c60034d140d7803bc9 422 SUPERFAMILY SSF142433 256 416 1.31E-44 T 22-04-2016 IPR008136 CinA, C-terminal SII_RS09000 58e79e95ae0c46c60034d140d7803bc9 422 TIGRFAM TIGR00200 cinA_nterm: competence/damage-inducible protein CinA N-terminal domain 1 415 1.5E-115 T 22-04-2016 IPR008135 Competence-induced protein CinA SII_RS09000 58e79e95ae0c46c60034d140d7803bc9 422 SMART SM00852 4 172 1.9E-36 T 22-04-2016 IPR001453 MoaB/Mog domain SII_RS09000 58e79e95ae0c46c60034d140d7803bc9 422 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 1 165 6.0E-27 T 22-04-2016 IPR001453 MoaB/Mog domain SII_RS09000 58e79e95ae0c46c60034d140d7803bc9 422 PANTHER PTHR13939 1 421 6.7E-167 T 22-04-2016 SII_RS09000 58e79e95ae0c46c60034d140d7803bc9 422 PIRSF PIRSF006728 1 421 1.5E-140 T 22-04-2016 IPR008135 Competence-induced protein CinA SII_RS09000 58e79e95ae0c46c60034d140d7803bc9 422 SUPERFAMILY SSF53218 1 203 7.72E-40 T 22-04-2016 IPR001453 MoaB/Mog domain SII_RS09000 58e79e95ae0c46c60034d140d7803bc9 422 Gene3D G3DSA:3.40.980.10 144 170 9.2E-36 T 22-04-2016 IPR001453 MoaB/Mog domain SII_RS09000 58e79e95ae0c46c60034d140d7803bc9 422 Gene3D G3DSA:3.40.980.10 1 102 9.2E-36 T 22-04-2016 IPR001453 MoaB/Mog domain SII_RS09000 58e79e95ae0c46c60034d140d7803bc9 422 Hamap MF_00226_B Putative competence-damage inducible protein [cinA]. 1 422 152.38 T 22-04-2016 IPR008135 Competence-induced protein CinA SII_RS09000 58e79e95ae0c46c60034d140d7803bc9 422 PANTHER PTHR13939:SF0 1 421 6.7E-167 T 22-04-2016 SII_RS09000 58e79e95ae0c46c60034d140d7803bc9 422 Pfam PF00994 Probable molybdopterin binding domain 4 170 4.4E-33 T 22-04-2016 IPR001453 MoaB/Mog domain SII_RS09000 58e79e95ae0c46c60034d140d7803bc9 422 Gene3D G3DSA:3.90.950.20 256 417 1.5E-51 T 22-04-2016 IPR008136 CinA, C-terminal SII_RS09000 58e79e95ae0c46c60034d140d7803bc9 422 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 270 414 6.6E-35 T 22-04-2016 IPR008136 CinA, C-terminal SII_RS09000 58e79e95ae0c46c60034d140d7803bc9 422 Pfam PF02464 Competence-damaged protein 263 415 2.7E-45 T 22-04-2016 IPR008136 CinA, C-terminal SII_RS01280 dbb140050b484800de827e28e3cbef11 298 SUPERFAMILY SSF51366 48 233 2.12E-10 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 SII_RS01280 dbb140050b484800de827e28e3cbef11 298 Gene3D G3DSA:3.20.20.70 119 201 1.9E-6 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SII_RS03395 1b0283685e41d5f965593583fc156311 832 SUPERFAMILY SSF52540 514 545 1.21E-21 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS03395 1b0283685e41d5f965593583fc156311 832 SUPERFAMILY SSF52540 335 487 1.21E-21 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS03395 1b0283685e41d5f965593583fc156311 832 SUPERFAMILY SSF52540 682 797 1.21E-21 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS03395 1b0283685e41d5f965593583fc156311 832 Gene3D G3DSA:3.20.20.140 95 219 5.8E-10 T 22-04-2016 SII_RS03395 1b0283685e41d5f965593583fc156311 832 Gene3D G3DSA:3.40.50.300 695 797 1.2E-21 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS03395 1b0283685e41d5f965593583fc156311 832 Gene3D G3DSA:3.40.50.300 338 546 1.2E-21 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS03395 1b0283685e41d5f965593583fc156311 832 Pfam PF02463 RecF/RecN/SMC N terminal domain 337 785 9.2E-11 T 22-04-2016 IPR003395 RecF/RecN/SMC, N-terminal SII_RS03395 1b0283685e41d5f965593583fc156311 832 SUPERFAMILY SSF89550 96 214 2.16E-9 T 22-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 SII_RS04015 3ea8293736b7f3a0df66d046da9bba51 232 SMART SM00345 8 67 1.9E-22 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SII_RS04015 3ea8293736b7f3a0df66d046da9bba51 232 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 27 41 5.7E-11 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SII_RS04015 3ea8293736b7f3a0df66d046da9bba51 232 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 41 57 5.7E-11 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SII_RS04015 3ea8293736b7f3a0df66d046da9bba51 232 PANTHER PTHR11751 1 70 1.7E-29 T 22-04-2016 SII_RS04015 3ea8293736b7f3a0df66d046da9bba51 232 PANTHER PTHR11751 117 140 1.7E-29 T 22-04-2016 SII_RS04015 3ea8293736b7f3a0df66d046da9bba51 232 SMART SM00866 88 226 1.5E-35 T 22-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 SII_RS04015 3ea8293736b7f3a0df66d046da9bba51 232 SUPERFAMILY SSF64288 55 230 4.71E-46 T 22-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain SII_RS04015 3ea8293736b7f3a0df66d046da9bba51 232 Pfam PF00392 Bacterial regulatory proteins, gntR family 5 67 9.6E-22 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SII_RS04015 3ea8293736b7f3a0df66d046da9bba51 232 SUPERFAMILY SSF46785 3 71 5.27E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SII_RS04015 3ea8293736b7f3a0df66d046da9bba51 232 Pfam PF07702 UTRA domain 88 226 1.1E-36 T 22-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 SII_RS04015 3ea8293736b7f3a0df66d046da9bba51 232 Gene3D G3DSA:3.40.1410.10 65 231 1.3E-51 T 22-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain SII_RS04015 3ea8293736b7f3a0df66d046da9bba51 232 PANTHER PTHR11751:SF303 1 70 1.7E-29 T 22-04-2016 SII_RS04015 3ea8293736b7f3a0df66d046da9bba51 232 PANTHER PTHR11751:SF303 117 140 1.7E-29 T 22-04-2016 SII_RS04015 3ea8293736b7f3a0df66d046da9bba51 232 Gene3D G3DSA:1.10.10.10 3 64 3.7E-28 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SII_RS03955 8dc77b184d957511703326be8e738bcc 356 Gene3D G3DSA:1.10.150.130 32 123 2.2E-11 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal SII_RS03955 8dc77b184d957511703326be8e738bcc 356 Gene3D G3DSA:1.10.443.10 166 353 1.8E-39 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 SII_RS03955 8dc77b184d957511703326be8e738bcc 356 PANTHER PTHR30349 188 355 2.0E-107 T 22-04-2016 SII_RS03955 8dc77b184d957511703326be8e738bcc 356 PANTHER PTHR30349 11 159 2.0E-107 T 22-04-2016 SII_RS03955 8dc77b184d957511703326be8e738bcc 356 SUPERFAMILY SSF56349 19 354 4.41E-35 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 SII_RS03955 8dc77b184d957511703326be8e738bcc 356 Pfam PF00589 Phage integrase family 189 344 5.9E-26 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 SII_RS03955 8dc77b184d957511703326be8e738bcc 356 PANTHER PTHR30349:SF17 188 355 2.0E-107 T 22-04-2016 SII_RS03955 8dc77b184d957511703326be8e738bcc 356 PANTHER PTHR30349:SF17 11 159 2.0E-107 T 22-04-2016 SII_RS03955 8dc77b184d957511703326be8e738bcc 356 Pfam PF13495 Phage integrase, N-terminal SAM-like domain 33 122 4.8E-7 T 22-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 SII_RS03955 8dc77b184d957511703326be8e738bcc 356 Hamap MF_01816 Tyrosine recombinase XerS [xerS]. 1 356 56.552 T 22-04-2016 IPR023670 Tyrosine recombinase XerS GO:0006310|GO:0007049|GO:0007059|GO:0015074|GO:0051301 SII_RS01260 5d914df9d2d14b2631b85ba12e254723 422 Gene3D G3DSA:2.30.40.10 3 60 5.0E-15 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SII_RS01260 5d914df9d2d14b2631b85ba12e254723 422 Gene3D G3DSA:2.30.40.10 367 411 5.0E-15 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SII_RS01260 5d914df9d2d14b2631b85ba12e254723 422 PANTHER PTHR11271 4 422 4.9E-165 T 22-04-2016 SII_RS01260 5d914df9d2d14b2631b85ba12e254723 422 SUPERFAMILY SSF51556 58 359 5.45E-90 T 22-04-2016 IPR032466 Metal-dependent hydrolase SII_RS01260 5d914df9d2d14b2631b85ba12e254723 422 SUPERFAMILY SSF51338 358 420 6.14E-23 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SII_RS01260 5d914df9d2d14b2631b85ba12e254723 422 SUPERFAMILY SSF51338 4 58 6.14E-23 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SII_RS01260 5d914df9d2d14b2631b85ba12e254723 422 Pfam PF01979 Amidohydrolase family 56 408 7.3E-70 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 SII_RS01260 5d914df9d2d14b2631b85ba12e254723 422 Gene3D G3DSA:3.20.20.140 61 366 1.5E-97 T 22-04-2016 SII_RS01260 5d914df9d2d14b2631b85ba12e254723 422 PANTHER PTHR11271:SF7 4 422 4.9E-165 T 22-04-2016 SII_RS04785 627fa9c507950d74d7d965dae342befc 1177 PIRSF PIRSF005719 1 1177 1.2E-275 T 22-04-2016 IPR024704 Structural maintenance of chromosomes protein SII_RS04785 627fa9c507950d74d7d965dae342befc 1177 Pfam PF02463 RecF/RecN/SMC N terminal domain 2 1164 7.6E-59 T 22-04-2016 IPR003395 RecF/RecN/SMC, N-terminal SII_RS04785 627fa9c507950d74d7d965dae342befc 1177 Gene3D G3DSA:3.40.50.300 1021 1174 3.7E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS04785 627fa9c507950d74d7d965dae342befc 1177 Gene3D G3DSA:3.40.50.300 1 163 3.7E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS04785 627fa9c507950d74d7d965dae342befc 1177 PANTHER PTHR18937:SF251 1 485 0.0 T 22-04-2016 SII_RS04785 627fa9c507950d74d7d965dae342befc 1177 PANTHER PTHR18937:SF251 509 1177 0.0 T 22-04-2016 SII_RS04785 627fa9c507950d74d7d965dae342befc 1177 PANTHER PTHR18937 1 485 0.0 T 22-04-2016 SII_RS04785 627fa9c507950d74d7d965dae342befc 1177 PANTHER PTHR18937 509 1177 0.0 T 22-04-2016 SII_RS04785 627fa9c507950d74d7d965dae342befc 1177 TIGRFAM TIGR02168 SMC_prok_B: chromosome segregation protein SMC 2 1171 0.0 T 22-04-2016 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 SII_RS04785 627fa9c507950d74d7d965dae342befc 1177 SMART SM00968 518 637 8.7E-38 T 22-04-2016 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 SII_RS04785 627fa9c507950d74d7d965dae342befc 1177 Pfam PF06470 SMC proteins Flexible Hinge Domain 519 635 2.0E-27 T 22-04-2016 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 SII_RS04785 627fa9c507950d74d7d965dae342befc 1177 SUPERFAMILY SSF75553 480 684 3.27E-50 T 22-04-2016 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 SII_RS04785 627fa9c507950d74d7d965dae342befc 1177 SUPERFAMILY SSF52540 1 216 1.48E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS04785 627fa9c507950d74d7d965dae342befc 1177 SUPERFAMILY SSF52540 1070 1156 1.48E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS04785 627fa9c507950d74d7d965dae342befc 1177 Hamap MF_01894 Chromosome partition protein Smc [smc]. 1 1173 22.507 T 22-04-2016 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 SII_RS09550 ba9fcdc6882f2ae07c1a8bf47931d060 255 SMART SM00470 5 95 2.8E-36 T 22-04-2016 IPR003115 ParB/Sulfiredoxin SII_RS09550 ba9fcdc6882f2ae07c1a8bf47931d060 255 Pfam PF02195 ParB-like nuclease domain 6 94 1.1E-27 T 22-04-2016 IPR003115 ParB/Sulfiredoxin SII_RS09550 ba9fcdc6882f2ae07c1a8bf47931d060 255 Gene3D G3DSA:3.90.1530.10 2 101 5.7E-39 T 22-04-2016 SII_RS09550 ba9fcdc6882f2ae07c1a8bf47931d060 255 SUPERFAMILY SSF109709 89 192 9.02E-34 T 22-04-2016 SII_RS09550 ba9fcdc6882f2ae07c1a8bf47931d060 255 PANTHER PTHR33375:SF3 2 253 2.5E-105 T 22-04-2016 SII_RS09550 ba9fcdc6882f2ae07c1a8bf47931d060 255 SUPERFAMILY SSF110849 5 97 9.42E-29 T 22-04-2016 IPR003115 ParB/Sulfiredoxin SII_RS09550 ba9fcdc6882f2ae07c1a8bf47931d060 255 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 3 176 1.8E-61 T 22-04-2016 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 SII_RS09550 ba9fcdc6882f2ae07c1a8bf47931d060 255 PANTHER PTHR33375 2 253 2.5E-105 T 22-04-2016 SII_RS06685 d15ccd70590987d705e244a9f06d70bf 331 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 238 327 8.9E-5 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SII_RS06685 d15ccd70590987d705e244a9f06d70bf 331 PANTHER PTHR24421:SF1 4 96 6.0E-53 T 22-04-2016 SII_RS06685 d15ccd70590987d705e244a9f06d70bf 331 PANTHER PTHR24421:SF1 127 327 6.0E-53 T 22-04-2016 SII_RS06685 d15ccd70590987d705e244a9f06d70bf 331 PIRSF PIRSF037431 1 331 5.8E-114 T 22-04-2016 IPR017202 Sensor histidine kinase LiaS/VraS GO:0000155|GO:0000160|GO:0004673|GO:0016021 SII_RS06685 d15ccd70590987d705e244a9f06d70bf 331 SUPERFAMILY SSF55874 194 327 1.7E-14 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SII_RS06685 d15ccd70590987d705e244a9f06d70bf 331 Pfam PF07730 Histidine kinase 132 200 5.2E-16 T 22-04-2016 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 SII_RS06685 d15ccd70590987d705e244a9f06d70bf 331 Gene3D G3DSA:3.30.565.10 205 327 8.0E-9 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SII_RS06685 d15ccd70590987d705e244a9f06d70bf 331 SMART SM00387 236 329 0.003 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SII_RS06685 d15ccd70590987d705e244a9f06d70bf 331 PANTHER PTHR24421 4 96 6.0E-53 T 22-04-2016 SII_RS06685 d15ccd70590987d705e244a9f06d70bf 331 PANTHER PTHR24421 127 327 6.0E-53 T 22-04-2016 SII_RS06655 756f4df5de3d3b336fd80f4a171eafda 258 PANTHER PTHR33602:SF1 1 222 4.7E-35 T 22-04-2016 SII_RS06655 756f4df5de3d3b336fd80f4a171eafda 258 PANTHER PTHR33602 1 222 4.7E-35 T 22-04-2016 SII_RS06655 756f4df5de3d3b336fd80f4a171eafda 258 Gene3D G3DSA:1.10.10.10 104 145 5.2E-6 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SII_RS06655 756f4df5de3d3b336fd80f4a171eafda 258 Pfam PF02631 RecX family 200 255 9.7E-5 T 22-04-2016 IPR003783 Regulatory protein RecX GO:0006282 SII_RS06655 756f4df5de3d3b336fd80f4a171eafda 258 Pfam PF02631 RecX family 81 198 1.9E-23 T 22-04-2016 IPR003783 Regulatory protein RecX GO:0006282 SII_RS06655 756f4df5de3d3b336fd80f4a171eafda 258 Hamap MF_01114 Regulatory protein RecX [recX]. 38 203 16.599 T 22-04-2016 IPR003783 Regulatory protein RecX GO:0006282 SII_RS06010 55d6a0a0b8d76e7ec9b24117589f826e 185 PANTHER PTHR20982 1 185 3.5E-78 T 22-04-2016 IPR002661 Ribosome recycling factor GO:0006412 SII_RS06010 55d6a0a0b8d76e7ec9b24117589f826e 185 Gene3D G3DSA:1.10.132.20 66 185 8.9E-43 T 22-04-2016 IPR023584 Ribosome recycling factor domain SII_RS06010 55d6a0a0b8d76e7ec9b24117589f826e 185 Hamap MF_00040 Ribosome-recycling factor [frr]. 3 185 27.041 T 22-04-2016 IPR002661 Ribosome recycling factor GO:0006412 SII_RS06010 55d6a0a0b8d76e7ec9b24117589f826e 185 Pfam PF01765 Ribosome recycling factor 21 183 4.8E-62 T 22-04-2016 IPR023584 Ribosome recycling factor domain SII_RS06010 55d6a0a0b8d76e7ec9b24117589f826e 185 SUPERFAMILY SSF55194 1 185 5.49E-68 T 22-04-2016 IPR023584 Ribosome recycling factor domain SII_RS06010 55d6a0a0b8d76e7ec9b24117589f826e 185 TIGRFAM TIGR00496 frr: ribosome recycling factor 10 185 4.7E-70 T 22-04-2016 IPR002661 Ribosome recycling factor GO:0006412 SII_RS01705 658f897d62848935a9f243538219db47 474 ProSitePatterns PS00461 6-phosphogluconate dehydrogenase signature. 256 268 - T 22-04-2016 IPR006184 6-phosphogluconate-binding site GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 SII_RS01705 658f897d62848935a9f243538219db47 474 SUPERFAMILY SSF51735 4 166 9.67E-49 T 22-04-2016 IPR016040 NAD(P)-binding domain SII_RS01705 658f897d62848935a9f243538219db47 474 Gene3D G3DSA:1.20.5.320 439 471 3.5E-21 T 22-04-2016 IPR012284 6-phosphogluconate dehydrogenase, domain 3 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 SII_RS01705 658f897d62848935a9f243538219db47 474 SUPERFAMILY SSF48179 178 473 2.58E-132 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 SII_RS01705 658f897d62848935a9f243538219db47 474 Gene3D G3DSA:3.40.50.720 1 181 1.0E-56 T 22-04-2016 IPR016040 NAD(P)-binding domain SII_RS01705 658f897d62848935a9f243538219db47 474 TIGRFAM TIGR00873 gnd: 6-phosphogluconate dehydrogenase (decarboxylating) 5 471 2.9E-217 T 22-04-2016 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 SII_RS01705 658f897d62848935a9f243538219db47 474 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 5 175 2.3E-48 T 22-04-2016 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 SII_RS01705 658f897d62848935a9f243538219db47 474 PIRSF PIRSF000109 1 474 2.6E-235 T 22-04-2016 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 SII_RS01705 658f897d62848935a9f243538219db47 474 Pfam PF00393 6-phosphogluconate dehydrogenase, C-terminal domain 180 470 5.8E-131 T 22-04-2016 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 SII_RS01705 658f897d62848935a9f243538219db47 474 Gene3D G3DSA:1.10.1040.10 182 437 2.1E-116 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 SII_RS01705 658f897d62848935a9f243538219db47 474 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 4 27 1.9E-88 T 22-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 SII_RS01705 658f897d62848935a9f243538219db47 474 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 66 95 1.9E-88 T 22-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 SII_RS01705 658f897d62848935a9f243538219db47 474 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 119 144 1.9E-88 T 22-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 SII_RS01705 658f897d62848935a9f243538219db47 474 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 252 279 1.9E-88 T 22-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 SII_RS01705 658f897d62848935a9f243538219db47 474 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 360 382 1.9E-88 T 22-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 SII_RS01705 658f897d62848935a9f243538219db47 474 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 169 197 1.9E-88 T 22-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 SII_RS01705 658f897d62848935a9f243538219db47 474 PANTHER PTHR11811:SF25 1 473 2.2E-293 T 22-04-2016 SII_RS01705 658f897d62848935a9f243538219db47 474 PANTHER PTHR11811 1 473 2.2E-293 T 22-04-2016 SII_RS01705 658f897d62848935a9f243538219db47 474 SMART SM01350 180 471 3.0E-220 T 22-04-2016 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 SII_RS00600 8a51acff30c0175425411bc40f0dcdba 234 Gene3D G3DSA:3.40.50.300 4 212 2.0E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS00600 8a51acff30c0175425411bc40f0dcdba 234 PANTHER PTHR24220 5 207 1.5E-60 T 22-04-2016 SII_RS00600 8a51acff30c0175425411bc40f0dcdba 234 SMART SM00382 28 216 7.2E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain SII_RS00600 8a51acff30c0175425411bc40f0dcdba 234 Pfam PF00005 ABC transporter 19 165 6.2E-24 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SII_RS00600 8a51acff30c0175425411bc40f0dcdba 234 SUPERFAMILY SSF52540 3 214 8.74E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS00600 8a51acff30c0175425411bc40f0dcdba 234 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SII_RS04985 3b403df33bf82389ecf5b98481b789a4 225 SUPERFAMILY SSF52540 3 220 6.25E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS04985 3b403df33bf82389ecf5b98481b789a4 225 ProSitePatterns PS00211 ABC transporters family signature. 124 138 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SII_RS04985 3b403df33bf82389ecf5b98481b789a4 225 Gene3D G3DSA:3.40.50.300 2 208 3.7E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS04985 3b403df33bf82389ecf5b98481b789a4 225 PANTHER PTHR24220:SF453 4 204 1.7E-85 T 22-04-2016 SII_RS04985 3b403df33bf82389ecf5b98481b789a4 225 Pfam PF00005 ABC transporter 18 152 1.3E-25 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SII_RS04985 3b403df33bf82389ecf5b98481b789a4 225 SMART SM00382 27 200 9.7E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain SII_RS04985 3b403df33bf82389ecf5b98481b789a4 225 PANTHER PTHR24220 4 204 1.7E-85 T 22-04-2016 SII_RS01635 7edb941e00e436622e947f6d56d29dfd 67 Gene3D G3DSA:1.10.260.40 6 66 2.6E-21 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SII_RS01635 7edb941e00e436622e947f6d56d29dfd 67 PANTHER PTHR10245:SF56 4 66 9.7E-36 T 22-04-2016 SII_RS01635 7edb941e00e436622e947f6d56d29dfd 67 PANTHER PTHR10245 4 66 9.7E-36 T 22-04-2016 SII_RS01635 7edb941e00e436622e947f6d56d29dfd 67 SUPERFAMILY SSF47413 5 66 1.42E-17 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SII_RS01635 7edb941e00e436622e947f6d56d29dfd 67 Pfam PF01381 Helix-turn-helix 7 61 1.5E-15 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SII_RS01635 7edb941e00e436622e947f6d56d29dfd 67 SMART SM00530 6 61 2.3E-15 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SII_RS09545 ba8fa6fb5d199deb55e35879c3a5e56c 396 Gene3D G3DSA:2.40.10.10 179 291 2.1E-41 T 22-04-2016 SII_RS09545 ba8fa6fb5d199deb55e35879c3a5e56c 396 PANTHER PTHR22939 56 388 1.8E-100 T 22-04-2016 SII_RS09545 ba8fa6fb5d199deb55e35879c3a5e56c 396 SUPERFAMILY SSF50156 318 388 2.0E-17 T 22-04-2016 IPR001478 PDZ domain GO:0005515 SII_RS09545 ba8fa6fb5d199deb55e35879c3a5e56c 396 PANTHER PTHR22939:SF79 56 388 1.8E-100 T 22-04-2016 SII_RS09545 ba8fa6fb5d199deb55e35879c3a5e56c 396 PRINTS PR00834 HtrA/DegQ protease family signature 137 157 1.5E-32 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 SII_RS09545 ba8fa6fb5d199deb55e35879c3a5e56c 396 PRINTS PR00834 HtrA/DegQ protease family signature 334 346 1.5E-32 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 SII_RS09545 ba8fa6fb5d199deb55e35879c3a5e56c 396 PRINTS PR00834 HtrA/DegQ protease family signature 116 128 1.5E-32 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 SII_RS09545 ba8fa6fb5d199deb55e35879c3a5e56c 396 PRINTS PR00834 HtrA/DegQ protease family signature 220 237 1.5E-32 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 SII_RS09545 ba8fa6fb5d199deb55e35879c3a5e56c 396 PRINTS PR00834 HtrA/DegQ protease family signature 178 202 1.5E-32 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 SII_RS09545 ba8fa6fb5d199deb55e35879c3a5e56c 396 PRINTS PR00834 HtrA/DegQ protease family signature 242 259 1.5E-32 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 SII_RS09545 ba8fa6fb5d199deb55e35879c3a5e56c 396 Pfam PF13365 Trypsin-like peptidase domain 104 249 1.7E-27 T 22-04-2016 SII_RS09545 ba8fa6fb5d199deb55e35879c3a5e56c 396 Pfam PF13180 PDZ domain 290 385 3.1E-21 T 22-04-2016 IPR001478 PDZ domain GO:0005515 SII_RS09545 ba8fa6fb5d199deb55e35879c3a5e56c 396 Gene3D G3DSA:2.30.42.10 292 389 3.6E-21 T 22-04-2016 IPR001478 PDZ domain GO:0005515 SII_RS09545 ba8fa6fb5d199deb55e35879c3a5e56c 396 SUPERFAMILY SSF50494 55 286 1.57E-51 T 22-04-2016 IPR009003 Peptidase S1, PA clan SII_RS09545 ba8fa6fb5d199deb55e35879c3a5e56c 396 Gene3D G3DSA:2.40.10.10 98 178 4.8E-24 T 22-04-2016 SII_RS09545 ba8fa6fb5d199deb55e35879c3a5e56c 396 SMART SM00228 290 376 2.8E-7 T 22-04-2016 IPR001478 PDZ domain GO:0005515 SII_RS09230 389611aae1d6bec40cb361c855e171c0 297 PANTHER PTHR11562:SF17 3 281 4.4E-60 T 22-04-2016 SII_RS09230 389611aae1d6bec40cb361c855e171c0 297 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 4 272 5.9E-54 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 SII_RS09230 389611aae1d6bec40cb361c855e171c0 297 Pfam PF01545 Cation efflux family 8 195 8.7E-37 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 SII_RS09230 389611aae1d6bec40cb361c855e171c0 297 Gene3D G3DSA:1.20.1510.10 4 195 1.1E-41 T 22-04-2016 IPR027469 Cation efflux protein transmembrane domain SII_RS09230 389611aae1d6bec40cb361c855e171c0 297 PANTHER PTHR11562 3 281 4.4E-60 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 SII_RS09230 389611aae1d6bec40cb361c855e171c0 297 SUPERFAMILY SSF161111 4 197 4.45E-42 T 22-04-2016 SII_RS03725 9b4cfdc6711dafb74051977db7cb6022 155 TIGRFAM TIGR00086 smpB: SsrA-binding protein 9 150 2.1E-58 T 22-04-2016 IPR000037 SsrA-binding protein GO:0003723 SII_RS03725 9b4cfdc6711dafb74051977db7cb6022 155 PANTHER PTHR30308 1 155 1.1E-80 T 22-04-2016 SII_RS03725 9b4cfdc6711dafb74051977db7cb6022 155 Hamap MF_00023 SsrA-binding protein [smpB]. 1 155 71.583 T 22-04-2016 IPR000037 SsrA-binding protein GO:0003723 SII_RS03725 9b4cfdc6711dafb74051977db7cb6022 155 Gene3D G3DSA:2.40.280.10 7 127 7.9E-52 T 22-04-2016 IPR023620 Small protein B SII_RS03725 9b4cfdc6711dafb74051977db7cb6022 155 ProSitePatterns PS01317 SsrA-binding protein. 27 39 - T 22-04-2016 IPR020081 SsrA-binding protein, conserved site SII_RS03725 9b4cfdc6711dafb74051977db7cb6022 155 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 9 132 1.0E-44 T 22-04-2016 IPR000037 SsrA-binding protein GO:0003723 SII_RS03725 9b4cfdc6711dafb74051977db7cb6022 155 PANTHER PTHR30308:SF2 1 155 1.1E-80 T 22-04-2016 SII_RS03725 9b4cfdc6711dafb74051977db7cb6022 155 SUPERFAMILY SSF74982 4 132 1.83E-50 T 22-04-2016 IPR023620 Small protein B SII_RS03725 9b4cfdc6711dafb74051977db7cb6022 155 Pfam PF01668 SmpB protein 8 72 7.0E-31 T 22-04-2016 IPR000037 SsrA-binding protein GO:0003723 SII_RS04410 6e065ee21f7ae1cf9faae8ad6fa04e20 220 PIRSF PIRSF001357 1 219 2.8E-79 T 22-04-2016 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|UniPathway: UPA00002 SII_RS04410 6e065ee21f7ae1cf9faae8ad6fa04e20 220 Pfam PF01791 DeoC/LacD family aldolase 7 211 1.0E-19 T 22-04-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 SII_RS04410 6e065ee21f7ae1cf9faae8ad6fa04e20 220 PANTHER PTHR10889 1 220 9.6E-112 T 22-04-2016 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|UniPathway: UPA00002 SII_RS04410 6e065ee21f7ae1cf9faae8ad6fa04e20 220 Hamap MF_00114 Deoxyribose-phosphate aldolase [deoC]. 1 215 38.695 T 22-04-2016 IPR028581 Deoxyribose-phosphate aldolase type I GO:0004139 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|UniPathway: UPA00002 SII_RS04410 6e065ee21f7ae1cf9faae8ad6fa04e20 220 SMART SM01133 2 213 4.2E-105 T 22-04-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 SII_RS04410 6e065ee21f7ae1cf9faae8ad6fa04e20 220 TIGRFAM TIGR00126 deoC: deoxyribose-phosphate aldolase 3 211 1.2E-92 T 22-04-2016 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|UniPathway: UPA00002 SII_RS04410 6e065ee21f7ae1cf9faae8ad6fa04e20 220 Gene3D G3DSA:3.20.20.70 1 215 4.6E-94 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SII_RS04410 6e065ee21f7ae1cf9faae8ad6fa04e20 220 SUPERFAMILY SSF51569 1 213 1.57E-85 T 22-04-2016 SII_RS08950 7f7480c1927ce8cf62d17fedf11405e8 510 Pfam PF13396 Phospholipase_D-nuclease N-terminal 49 88 3.3E-9 T 22-04-2016 IPR027379 Cardiolipin synthase N-terminal SII_RS08950 7f7480c1927ce8cf62d17fedf11405e8 510 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 40 510 2.9E-104 T 22-04-2016 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 SII_RS08950 7f7480c1927ce8cf62d17fedf11405e8 510 PANTHER PTHR21248 48 510 1.9E-112 T 22-04-2016 SII_RS08950 7f7480c1927ce8cf62d17fedf11405e8 510 SMART SM00155 424 451 0.0047 T 22-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 SII_RS08950 7f7480c1927ce8cf62d17fedf11405e8 510 SMART SM00155 245 272 7.7E-5 T 22-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 SII_RS08950 7f7480c1927ce8cf62d17fedf11405e8 510 Pfam PF13091 PLD-like domain 163 273 1.2E-9 T 22-04-2016 IPR025202 Phospholipase D-like domain SII_RS08950 7f7480c1927ce8cf62d17fedf11405e8 510 Pfam PF13091 PLD-like domain 354 478 4.7E-21 T 22-04-2016 IPR025202 Phospholipase D-like domain SII_RS08950 7f7480c1927ce8cf62d17fedf11405e8 510 Gene3D G3DSA:3.30.870.10 349 486 1.8E-28 T 22-04-2016 SII_RS08950 7f7480c1927ce8cf62d17fedf11405e8 510 Gene3D G3DSA:3.30.870.10 141 339 4.3E-44 T 22-04-2016 SII_RS08950 7f7480c1927ce8cf62d17fedf11405e8 510 SUPERFAMILY SSF56024 141 338 1.1E-39 T 22-04-2016 SII_RS08950 7f7480c1927ce8cf62d17fedf11405e8 510 PANTHER PTHR21248:SF5 48 510 1.9E-112 T 22-04-2016 SII_RS08950 7f7480c1927ce8cf62d17fedf11405e8 510 SUPERFAMILY SSF56024 332 491 4.71E-33 T 22-04-2016 SII_RS07695 6fa2a5dddd2cac31566d8f62ab17a292 231 PANTHER PTHR23029 6 217 8.2E-92 T 22-04-2016 SII_RS07695 6fa2a5dddd2cac31566d8f62ab17a292 231 PANTHER PTHR23029:SF29 6 217 8.2E-92 T 22-04-2016 SII_RS07695 6fa2a5dddd2cac31566d8f62ab17a292 231 SUPERFAMILY SSF53254 1 218 4.06E-50 T 22-04-2016 IPR029033 Histidine phosphatase superfamily SII_RS07695 6fa2a5dddd2cac31566d8f62ab17a292 231 Gene3D G3DSA:3.40.50.1240 1 222 2.7E-53 T 22-04-2016 IPR029033 Histidine phosphatase superfamily SII_RS07695 6fa2a5dddd2cac31566d8f62ab17a292 231 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 6 214 1.8E-32 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 SII_RS07695 6fa2a5dddd2cac31566d8f62ab17a292 231 SMART SM00855 5 180 9.3E-20 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 SII_RS03920 a34d0f7d988ec914eab087541e49538a 280 Gene3D G3DSA:3.40.50.450 104 248 3.2E-9 T 22-04-2016 SII_RS03920 a34d0f7d988ec914eab087541e49538a 280 PANTHER PTHR32039:SF8 1 279 4.5E-90 T 22-04-2016 SII_RS03920 a34d0f7d988ec914eab087541e49538a 280 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 75 277 2.4E-72 T 22-04-2016 IPR003488 DNA recombination-mediator protein A GO:0009294 SII_RS03920 a34d0f7d988ec914eab087541e49538a 280 SUPERFAMILY SSF102405 75 277 1.97E-36 T 22-04-2016 SII_RS03920 a34d0f7d988ec914eab087541e49538a 280 PANTHER PTHR32039 1 279 4.5E-90 T 22-04-2016 SII_RS03920 a34d0f7d988ec914eab087541e49538a 280 Pfam PF02481 DNA recombination-mediator protein A 74 269 5.8E-73 T 22-04-2016 IPR003488 DNA recombination-mediator protein A GO:0009294 SII_RS06175 9c3568c8854ed24a4b2f67a81b748794 288 Gene3D G3DSA:3.40.50.300 2 219 2.2E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS06175 9c3568c8854ed24a4b2f67a81b748794 288 SMART SM00382 27 203 1.2E-17 T 22-04-2016 IPR003593 AAA+ ATPase domain SII_RS06175 9c3568c8854ed24a4b2f67a81b748794 288 PANTHER PTHR24220 4 241 2.5E-80 T 22-04-2016 SII_RS06175 9c3568c8854ed24a4b2f67a81b748794 288 Pfam PF00005 ABC transporter 19 148 5.4E-33 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SII_RS06175 9c3568c8854ed24a4b2f67a81b748794 288 ProSitePatterns PS00211 ABC transporters family signature. 121 135 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SII_RS06175 9c3568c8854ed24a4b2f67a81b748794 288 SUPERFAMILY SSF52540 2 211 2.37E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS08170 9427919766474ac502e0daf10130d458 540 Hamap MF_00600 60 kDa chaperonin [groL]. 1 539 40.757 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 SII_RS08170 9427919766474ac502e0daf10130d458 540 SUPERFAMILY SSF48592 6 133 9.92E-78 T 22-04-2016 SII_RS08170 9427919766474ac502e0daf10130d458 540 SUPERFAMILY SSF48592 404 518 9.92E-78 T 22-04-2016 SII_RS08170 9427919766474ac502e0daf10130d458 540 TIGRFAM TIGR02348 GroEL: chaperonin GroL 2 523 4.9E-252 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 SII_RS08170 9427919766474ac502e0daf10130d458 540 SUPERFAMILY SSF52029 182 374 1.14E-83 T 22-04-2016 IPR027409 GroEL-like apical domain SII_RS08170 9427919766474ac502e0daf10130d458 540 Gene3D G3DSA:3.50.7.10 195 367 1.3E-95 T 22-04-2016 IPR027409 GroEL-like apical domain SII_RS08170 9427919766474ac502e0daf10130d458 540 Gene3D G3DSA:1.10.560.10 368 515 3.4E-42 T 22-04-2016 IPR027413 GroEL-like equatorial domain SII_RS08170 9427919766474ac502e0daf10130d458 540 SUPERFAMILY SSF54849 136 205 1.19E-26 T 22-04-2016 SII_RS08170 9427919766474ac502e0daf10130d458 540 PANTHER PTHR11353 1 540 2.4E-240 T 22-04-2016 SII_RS08170 9427919766474ac502e0daf10130d458 540 Pfam PF00118 TCP-1/cpn60 chaperonin family 22 521 4.3E-104 T 22-04-2016 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 SII_RS08170 9427919766474ac502e0daf10130d458 540 ProSitePatterns PS00296 Chaperonins cpn60 signature. 403 414 - T 22-04-2016 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 SII_RS08170 9427919766474ac502e0daf10130d458 540 Gene3D G3DSA:1.10.560.10 3 194 2.0E-47 T 22-04-2016 IPR027413 GroEL-like equatorial domain SII_RS08170 9427919766474ac502e0daf10130d458 540 PRINTS PR00298 60kDa chaperonin signature 266 289 1.9E-72 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 SII_RS08170 9427919766474ac502e0daf10130d458 540 PRINTS PR00298 60kDa chaperonin signature 348 373 1.9E-72 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 SII_RS08170 9427919766474ac502e0daf10130d458 540 PRINTS PR00298 60kDa chaperonin signature 26 52 1.9E-72 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 SII_RS08170 9427919766474ac502e0daf10130d458 540 PRINTS PR00298 60kDa chaperonin signature 82 109 1.9E-72 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 SII_RS08170 9427919766474ac502e0daf10130d458 540 PRINTS PR00298 60kDa chaperonin signature 396 417 1.9E-72 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 SII_RS06720 ee1c4bd5c9f79a9aeb286e7301e2bd42 104 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 2 59 9.7E-13 T 22-04-2016 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SII_RS06720 ee1c4bd5c9f79a9aeb286e7301e2bd42 104 SUPERFAMILY SSF63562 2 79 8.02E-23 T 22-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SII_RS06720 ee1c4bd5c9f79a9aeb286e7301e2bd42 104 Pfam PF01192 RNA polymerase Rpb6 10 59 1.9E-10 T 22-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SII_RS06720 ee1c4bd5c9f79a9aeb286e7301e2bd42 104 Gene3D G3DSA:3.90.940.10 2 84 4.0E-25 T 22-04-2016 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SII_RS06720 ee1c4bd5c9f79a9aeb286e7301e2bd42 104 SMART SM01409 9 61 7.3E-11 T 22-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SII_RS06720 ee1c4bd5c9f79a9aeb286e7301e2bd42 104 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 2 62 14.225 T 22-04-2016 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SII_RS06720 ee1c4bd5c9f79a9aeb286e7301e2bd42 104 PANTHER PTHR34476 3 91 6.4E-21 T 22-04-2016 SII_RS01035 9d6c63460aafd4debec7f803b77a885a 147 PANTHER PTHR23091 17 143 2.8E-19 T 22-04-2016 SII_RS01035 9d6c63460aafd4debec7f803b77a885a 147 Pfam PF13673 Acetyltransferase (GNAT) domain 33 125 7.7E-9 T 22-04-2016 IPR000182 GNAT domain GO:0008080 SII_RS01035 9d6c63460aafd4debec7f803b77a885a 147 Gene3D G3DSA:3.40.630.30 18 142 2.1E-22 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SII_RS01035 9d6c63460aafd4debec7f803b77a885a 147 SUPERFAMILY SSF55729 16 142 1.68E-21 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SII_RS01035 9d6c63460aafd4debec7f803b77a885a 147 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 17 140 1.4E-36 T 22-04-2016 IPR006464 Ribosomal-protein-alanine acetyltransferase GO:0006474|GO:0016407 SII_RS01035 9d6c63460aafd4debec7f803b77a885a 147 PANTHER PTHR23091:SF232 17 143 2.8E-19 T 22-04-2016 SII_RS03055 c4a53ef98e34f31b1a250a904fedf0b8 329 Gene3D G3DSA:3.40.50.720 1 138 9.9E-32 T 22-04-2016 IPR016040 NAD(P)-binding domain SII_RS03055 c4a53ef98e34f31b1a250a904fedf0b8 329 Gene3D G3DSA:3.30.360.10 139 326 7.2E-54 T 22-04-2016 SII_RS03055 c4a53ef98e34f31b1a250a904fedf0b8 329 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 3 116 5.8E-21 T 22-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 SII_RS03055 c4a53ef98e34f31b1a250a904fedf0b8 329 SUPERFAMILY SSF51735 170 188 3.52E-32 T 22-04-2016 IPR016040 NAD(P)-binding domain SII_RS03055 c4a53ef98e34f31b1a250a904fedf0b8 329 SUPERFAMILY SSF51735 2 140 3.52E-32 T 22-04-2016 IPR016040 NAD(P)-binding domain SII_RS03055 c4a53ef98e34f31b1a250a904fedf0b8 329 PANTHER PTHR22604:SF76 1 316 1.3E-100 T 22-04-2016 SII_RS03055 c4a53ef98e34f31b1a250a904fedf0b8 329 PANTHER PTHR22604 1 316 1.3E-100 T 22-04-2016 SII_RS03055 c4a53ef98e34f31b1a250a904fedf0b8 329 SUPERFAMILY SSF55347 145 287 8.67E-15 T 22-04-2016 SII_RS04245 07989c2b4ac375aabf793fe0cf12fa8c 339 PANTHER PTHR11825:SF2 4 338 1.1E-155 T 22-04-2016 SII_RS04245 07989c2b4ac375aabf793fe0cf12fa8c 339 SUPERFAMILY SSF56752 3 336 6.93E-100 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 SII_RS04245 07989c2b4ac375aabf793fe0cf12fa8c 339 Gene3D G3DSA:3.20.10.10 162 325 2.2E-56 T 22-04-2016 SII_RS04245 07989c2b4ac375aabf793fe0cf12fa8c 339 ProSitePatterns PS00770 Aminotransferases class-IV signature. 220 249 - T 22-04-2016 IPR018300 Aminotransferase, class IV, conserved site GO:0003824|GO:0008152 Reactome: REACT_13 SII_RS04245 07989c2b4ac375aabf793fe0cf12fa8c 339 TIGRFAM TIGR01123 ilvE_II: branched-chain amino acid aminotransferase 30 339 3.3E-133 T 22-04-2016 IPR005786 Branched-chain amino acid aminotransferase II GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|Reactome: REACT_13 SII_RS04245 07989c2b4ac375aabf793fe0cf12fa8c 339 Pfam PF01063 Amino-transferase class IV 55 293 9.7E-33 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 SII_RS04245 07989c2b4ac375aabf793fe0cf12fa8c 339 Gene3D G3DSA:3.30.470.10 4 161 1.4E-64 T 22-04-2016 SII_RS04245 07989c2b4ac375aabf793fe0cf12fa8c 339 PANTHER PTHR11825 4 338 1.1E-155 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 SII_RS04245 07989c2b4ac375aabf793fe0cf12fa8c 339 PIRSF PIRSF006468 2 339 2.6E-116 T 22-04-2016 IPR005786 Branched-chain amino acid aminotransferase II GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|Reactome: REACT_13 SII_RS01400 85efc6fb8714ce05bb94509d990a075a 750 SUPERFAMILY SSF51726 1 380 4.97E-92 T 22-04-2016 SII_RS01400 85efc6fb8714ce05bb94509d990a075a 750 Gene3D G3DSA:3.20.20.210 1 379 3.4E-127 T 22-04-2016 SII_RS01400 85efc6fb8714ce05bb94509d990a075a 750 Gene3D G3DSA:3.20.20.210 383 749 7.9E-123 T 22-04-2016 SII_RS01400 85efc6fb8714ce05bb94509d990a075a 750 PANTHER PTHR30519:SF0 1 750 0.0 T 22-04-2016 SII_RS01400 85efc6fb8714ce05bb94509d990a075a 750 Pfam PF08267 Cobalamin-independent synthase, N-terminal domain 3 311 9.4E-111 T 22-04-2016 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal GO:0003871|GO:0008270|GO:0008652 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 SII_RS01400 85efc6fb8714ce05bb94509d990a075a 750 PIRSF PIRSF000382 1 750 5.2E-300 T 22-04-2016 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 SII_RS01400 85efc6fb8714ce05bb94509d990a075a 750 Hamap MF_00172 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [metE]. 1 748 33.717 T 22-04-2016 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 SII_RS01400 85efc6fb8714ce05bb94509d990a075a 750 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 420 743 1.1E-134 T 22-04-2016 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 SII_RS01400 85efc6fb8714ce05bb94509d990a075a 750 PANTHER PTHR30519 1 750 0.0 T 22-04-2016 SII_RS01400 85efc6fb8714ce05bb94509d990a075a 750 TIGRFAM TIGR01371 met_syn_B12ind: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase 6 747 1.8E-304 T 22-04-2016 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 SII_RS01400 85efc6fb8714ce05bb94509d990a075a 750 SUPERFAMILY SSF51726 385 746 1.07E-107 T 22-04-2016 SII_RS09460 9c1e177f728dd890be59f6f383ae4efe 415 SUPERFAMILY SSF63411 5 215 1.75E-13 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 SII_RS09460 9c1e177f728dd890be59f6f383ae4efe 415 Gene3D G3DSA:3.30.830.10 1 225 1.3E-73 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 SII_RS09460 9c1e177f728dd890be59f6f383ae4efe 415 SUPERFAMILY SSF63411 245 404 4.94E-27 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 SII_RS09460 9c1e177f728dd890be59f6f383ae4efe 415 Gene3D G3DSA:3.30.830.10 241 404 1.7E-28 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 SII_RS09460 9c1e177f728dd890be59f6f383ae4efe 415 Pfam PF05193 Peptidase M16 inactive domain 186 351 2.0E-19 T 22-04-2016 IPR007863 Peptidase M16, C-terminal SII_RS04515 8335dae0ee566c811b0c1ab7e11b25c0 326 SUPERFAMILY SSF142338 3 318 6.41E-95 T 22-04-2016 SII_RS04515 8335dae0ee566c811b0c1ab7e11b25c0 326 Pfam PF01933 Uncharacterised protein family UPF0052 6 298 3.4E-90 T 22-04-2016 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 SII_RS04515 8335dae0ee566c811b0c1ab7e11b25c0 326 Hamap MF_00973 Gluconeogenesis factor. 2 323 33.671 T 22-04-2016 IPR010119 Gluconeogenesis factor SII_RS04515 8335dae0ee566c811b0c1ab7e11b25c0 326 PANTHER PTHR30135:SF3 1 325 4.6E-130 T 22-04-2016 SII_RS04515 8335dae0ee566c811b0c1ab7e11b25c0 326 PANTHER PTHR30135 1 325 4.6E-130 T 22-04-2016 SII_RS04515 8335dae0ee566c811b0c1ab7e11b25c0 326 TIGRFAM TIGR01826 CofD_related: conserved hypothetical protein 6 322 1.4E-120 T 22-04-2016 IPR010119 Gluconeogenesis factor SII_RS04515 8335dae0ee566c811b0c1ab7e11b25c0 326 Gene3D G3DSA:3.40.50.10680 77 322 4.1E-52 T 22-04-2016 SII_RS02930 38bfed06a93b4d0b322415db5f8a262c 309 PANTHER PTHR30217 1 308 4.0E-161 T 22-04-2016 SII_RS02930 38bfed06a93b4d0b322415db5f8a262c 309 PANTHER PTHR30217:SF7 1 308 4.0E-161 T 22-04-2016 SII_RS02930 38bfed06a93b4d0b322415db5f8a262c 309 Pfam PF01136 Peptidase family U32 74 306 1.3E-40 T 22-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- SII_RS02930 38bfed06a93b4d0b322415db5f8a262c 309 SUPERFAMILY SSF102114 4 95 1.86E-5 T 22-04-2016 SII_RS07760 f2ea98dccf0f0c56eb614ae8f3740340 213 Pfam PF12408 Ribose-5-phosphate isomerase 164 210 3.6E-25 T 22-04-2016 IPR022133 Ribose-5-phosphate isomerase, C-terminal SII_RS07760 f2ea98dccf0f0c56eb614ae8f3740340 213 Pfam PF02502 Ribose/Galactose Isomerase 3 160 8.0E-29 T 22-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 SII_RS07760 f2ea98dccf0f0c56eb614ae8f3740340 213 Gene3D G3DSA:3.40.1400.10 1 211 8.2E-94 T 22-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 SII_RS07760 f2ea98dccf0f0c56eb614ae8f3740340 213 SUPERFAMILY SSF89623 1 162 4.19E-36 T 22-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 SII_RS07760 f2ea98dccf0f0c56eb614ae8f3740340 213 PANTHER PTHR30345:SF0 1 213 2.4E-43 T 22-04-2016 SII_RS07760 f2ea98dccf0f0c56eb614ae8f3740340 213 PANTHER PTHR30345 1 213 2.4E-43 T 22-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 SII_RS05725 ea029807fc485912c15ce0433dcc9f26 325 SMART SM00937 39 153 1.4E-48 T 22-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 SII_RS05725 ea029807fc485912c15ce0433dcc9f26 325 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 203 219 - T 22-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 SII_RS05725 ea029807fc485912c15ce0433dcc9f26 325 TIGRFAM TIGR00020 prfB: peptide chain release factor 2 1 323 5.0E-142 T 22-04-2016 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 SII_RS05725 ea029807fc485912c15ce0433dcc9f26 325 Gene3D G3DSA:3.30.160.20 186 264 2.5E-31 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain SII_RS05725 ea029807fc485912c15ce0433dcc9f26 325 PANTHER PTHR11075:SF6 1 323 1.5E-146 T 22-04-2016 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 SII_RS05725 ea029807fc485912c15ce0433dcc9f26 325 Pfam PF03462 PCRF domain 1 178 3.4E-55 T 22-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 SII_RS05725 ea029807fc485912c15ce0433dcc9f26 325 Gene3D G3DSA:1.20.58.410 1 73 1.5E-13 T 22-04-2016 SII_RS05725 ea029807fc485912c15ce0433dcc9f26 325 PANTHER PTHR11075 1 323 1.5E-146 T 22-04-2016 SII_RS05725 ea029807fc485912c15ce0433dcc9f26 325 Pfam PF00472 RF-1 domain 187 296 3.5E-37 T 22-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 SII_RS05725 ea029807fc485912c15ce0433dcc9f26 325 SUPERFAMILY SSF75620 1 323 6.02E-125 T 22-04-2016 SII_RS07945 68c0fdd04d6ddfe181d24ff97d3288dd 376 Gene3D G3DSA:2.40.50.140 297 360 1.1E-11 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SII_RS07945 68c0fdd04d6ddfe181d24ff97d3288dd 376 SUPERFAMILY SSF50331 248 374 8.99E-26 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal SII_RS07945 68c0fdd04d6ddfe181d24ff97d3288dd 376 Pfam PF08402 TOBE domain 293 367 4.3E-6 T 22-04-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 SII_RS07945 68c0fdd04d6ddfe181d24ff97d3288dd 376 PANTHER PTHR24220 5 303 8.8E-167 T 22-04-2016 SII_RS07945 68c0fdd04d6ddfe181d24ff97d3288dd 376 SMART SM00382 30 213 2.1E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain SII_RS07945 68c0fdd04d6ddfe181d24ff97d3288dd 376 SUPERFAMILY SSF52540 4 256 6.04E-82 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS07945 68c0fdd04d6ddfe181d24ff97d3288dd 376 PANTHER PTHR24220:SF151 5 303 8.8E-167 T 22-04-2016 SII_RS07945 68c0fdd04d6ddfe181d24ff97d3288dd 376 Pfam PF00005 ABC transporter 22 163 3.1E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SII_RS07945 68c0fdd04d6ddfe181d24ff97d3288dd 376 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SII_RS07945 68c0fdd04d6ddfe181d24ff97d3288dd 376 Gene3D G3DSA:2.40.50.100 361 375 2.8E-24 T 22-04-2016 SII_RS07945 68c0fdd04d6ddfe181d24ff97d3288dd 376 Gene3D G3DSA:2.40.50.100 251 296 2.8E-24 T 22-04-2016 SII_RS07945 68c0fdd04d6ddfe181d24ff97d3288dd 376 Gene3D G3DSA:3.40.50.300 4 246 1.5E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS05100 208c6765ab87eac991ffea5a26c90c4c 219 Gene3D G3DSA:2.40.50.140 81 174 4.0E-6 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SII_RS05100 208c6765ab87eac991ffea5a26c90c4c 219 SUPERFAMILY SSF50249 83 175 9.71E-8 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SII_RS05760 28e87f57abdbf7094957efe40564e58e 512 PANTHER PTHR24221 1 484 2.2E-52 T 22-04-2016 SII_RS05760 28e87f57abdbf7094957efe40564e58e 512 SMART SM00382 341 511 4.3E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain SII_RS05760 28e87f57abdbf7094957efe40564e58e 512 ProSitePatterns PS00211 ABC transporters family signature. 442 456 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SII_RS05760 28e87f57abdbf7094957efe40564e58e 512 Pfam PF00664 ABC transporter transmembrane region 11 266 7.7E-13 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SII_RS05760 28e87f57abdbf7094957efe40564e58e 512 PANTHER PTHR24221:SF138 1 484 2.2E-52 T 22-04-2016 SII_RS05760 28e87f57abdbf7094957efe40564e58e 512 Gene3D G3DSA:3.40.50.300 317 510 9.6E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS05760 28e87f57abdbf7094957efe40564e58e 512 SUPERFAMILY SSF52540 316 510 1.36E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS05760 28e87f57abdbf7094957efe40564e58e 512 Pfam PF00005 ABC transporter 332 468 1.4E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SII_RS05760 28e87f57abdbf7094957efe40564e58e 512 SUPERFAMILY SSF90123 7 290 1.23E-34 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SII_RS05760 28e87f57abdbf7094957efe40564e58e 512 Gene3D G3DSA:1.20.1560.10 8 289 1.7E-26 T 22-04-2016 SII_RS06270 700c7dfbd1a14bb014760e79ccc3c9dd 169 PANTHER PTHR10815 1 165 1.8E-54 T 22-04-2016 SII_RS06270 700c7dfbd1a14bb014760e79ccc3c9dd 169 SUPERFAMILY SSF53155 5 85 1.88E-15 T 22-04-2016 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 SII_RS06270 700c7dfbd1a14bb014760e79ccc3c9dd 169 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 129 135 - T 22-04-2016 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 SII_RS06270 700c7dfbd1a14bb014760e79ccc3c9dd 169 SUPERFAMILY SSF46767 79 161 2.09E-31 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 SII_RS06270 700c7dfbd1a14bb014760e79ccc3c9dd 169 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 80 158 1.5E-32 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 SII_RS06270 700c7dfbd1a14bb014760e79ccc3c9dd 169 PANTHER PTHR10815:SF5 1 165 1.8E-54 T 22-04-2016 SII_RS06270 700c7dfbd1a14bb014760e79ccc3c9dd 169 Gene3D G3DSA:1.10.10.10 79 165 9.7E-38 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SII_RS06270 700c7dfbd1a14bb014760e79ccc3c9dd 169 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 82 160 4.0E-34 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 SII_RS07170 5f6d0b18759a6dd6a4e9aa6317ed216e 340 PANTHER PTHR11695:SF498 13 340 6.9E-143 T 22-04-2016 SII_RS07170 5f6d0b18759a6dd6a4e9aa6317ed216e 340 Gene3D G3DSA:3.40.50.720 167 286 2.0E-32 T 22-04-2016 IPR016040 NAD(P)-binding domain SII_RS07170 5f6d0b18759a6dd6a4e9aa6317ed216e 340 Pfam PF00107 Zinc-binding dehydrogenase 174 300 3.8E-26 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 SII_RS07170 5f6d0b18759a6dd6a4e9aa6317ed216e 340 SMART SM00829 10 336 5.8E-8 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 SII_RS07170 5f6d0b18759a6dd6a4e9aa6317ed216e 340 Gene3D G3DSA:3.90.180.10 1 166 9.1E-59 T 22-04-2016 IPR011032 GroES-like SII_RS07170 5f6d0b18759a6dd6a4e9aa6317ed216e 340 PANTHER PTHR11695 13 340 6.9E-143 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 SII_RS07170 5f6d0b18759a6dd6a4e9aa6317ed216e 340 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 27 133 6.5E-30 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 SII_RS07170 5f6d0b18759a6dd6a4e9aa6317ed216e 340 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 59 73 - T 22-04-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 SII_RS07170 5f6d0b18759a6dd6a4e9aa6317ed216e 340 SUPERFAMILY SSF51735 136 305 4.85E-41 T 22-04-2016 IPR016040 NAD(P)-binding domain SII_RS07170 5f6d0b18759a6dd6a4e9aa6317ed216e 340 SUPERFAMILY SSF50129 1 171 9.59E-47 T 22-04-2016 IPR011032 GroES-like SII_RS04630 b309c94e9e6a8b6915a060696f9a0658 170 PIRSF PIRSF000194 1 170 1.2E-54 T 22-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 SII_RS04630 b309c94e9e6a8b6915a060696f9a0658 170 PANTHER PTHR22778:SF16 1 169 2.5E-35 T 22-04-2016 SII_RS04630 b309c94e9e6a8b6915a060696f9a0658 170 ProSitePatterns PS00075 Dihydrofolate reductase (DHFR) domain signature. 16 38 - T 22-04-2016 IPR017925 Dihydrofolate reductase conserved site GO:0004146|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 SII_RS04630 b309c94e9e6a8b6915a060696f9a0658 170 Gene3D G3DSA:3.40.430.10 4 169 7.6E-56 T 22-04-2016 IPR024072 Dihydrofolate reductase-like domain SII_RS04630 b309c94e9e6a8b6915a060696f9a0658 170 PANTHER PTHR22778 1 169 2.5E-35 T 22-04-2016 SII_RS04630 b309c94e9e6a8b6915a060696f9a0658 170 PRINTS PR00070 Dihydrofolate reductase signature 16 26 3.1E-12 T 22-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 SII_RS04630 b309c94e9e6a8b6915a060696f9a0658 170 PRINTS PR00070 Dihydrofolate reductase signature 43 54 3.1E-12 T 22-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 SII_RS04630 b309c94e9e6a8b6915a060696f9a0658 170 PRINTS PR00070 Dihydrofolate reductase signature 98 112 3.1E-12 T 22-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 SII_RS04630 b309c94e9e6a8b6915a060696f9a0658 170 PRINTS PR00070 Dihydrofolate reductase signature 30 38 3.1E-12 T 22-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 SII_RS04630 b309c94e9e6a8b6915a060696f9a0658 170 SUPERFAMILY SSF53597 1 168 1.14E-54 T 22-04-2016 IPR024072 Dihydrofolate reductase-like domain SII_RS04630 b309c94e9e6a8b6915a060696f9a0658 170 Pfam PF00186 Dihydrofolate reductase 4 167 5.5E-58 T 22-04-2016 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0006545|GO:0009165|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 SII_RS00560 01c7cbcfab4e22a21b62d4ef15567e46 425 PANTHER PTHR11206:SF95 4 424 2.3E-76 T 22-04-2016 SII_RS00560 01c7cbcfab4e22a21b62d4ef15567e46 425 PIRSF PIRSF006603 2 425 7.3E-73 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 SII_RS00560 01c7cbcfab4e22a21b62d4ef15567e46 425 Pfam PF01554 MatE 225 385 2.8E-24 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 SII_RS00560 01c7cbcfab4e22a21b62d4ef15567e46 425 Pfam PF01554 MatE 13 171 7.7E-28 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 SII_RS00560 01c7cbcfab4e22a21b62d4ef15567e46 425 PANTHER PTHR11206 4 424 2.3E-76 T 22-04-2016 SII_RS00560 01c7cbcfab4e22a21b62d4ef15567e46 425 TIGRFAM TIGR00797 matE: MATE efflux family protein 13 399 7.0E-57 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 SII_RS02980 4cecb103491a47fb112e6d8af5a46066 285 PANTHER PTHR34185:SF1 11 285 1.3E-104 T 22-04-2016 SII_RS02980 4cecb103491a47fb112e6d8af5a46066 285 PANTHER PTHR34185 11 285 1.3E-104 T 22-04-2016 SII_RS02980 4cecb103491a47fb112e6d8af5a46066 285 TIGRFAM TIGR00159 TIGR00159: TIGR00159 family protein 24 257 3.8E-80 T 22-04-2016 IPR014046 Diadenylate cyclase-like SII_RS02980 4cecb103491a47fb112e6d8af5a46066 285 Gene3D G3DSA:3.40.1700.10 120 249 3.0E-51 T 22-04-2016 SII_RS02980 4cecb103491a47fb112e6d8af5a46066 285 SUPERFAMILY SSF143597 51 248 1.7E-64 T 22-04-2016 SII_RS02980 4cecb103491a47fb112e6d8af5a46066 285 PIRSF PIRSF004793 14 276 1.2E-82 T 22-04-2016 IPR014046 Diadenylate cyclase-like SII_RS02980 4cecb103491a47fb112e6d8af5a46066 285 Pfam PF02457 DisA bacterial checkpoint controller nucleotide-binding 127 243 2.2E-40 T 22-04-2016 IPR003390 DNA integrity scanning protein, DisA, N-terminal SII_RS03435 4ad8a50ce065e1f135d5a3eb96987788 341 Pfam PF04055 Radical SAM superfamily 26 180 1.8E-16 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 SII_RS03435 4ad8a50ce065e1f135d5a3eb96987788 341 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 240 321 5.7E-7 T 22-04-2016 IPR023885 4Fe4S-binding SPASM domain SII_RS03435 4ad8a50ce065e1f135d5a3eb96987788 341 Gene3D G3DSA:3.20.20.70 18 313 7.8E-46 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SII_RS03435 4ad8a50ce065e1f135d5a3eb96987788 341 Pfam PF13186 Iron-sulfur cluster-binding domain 240 299 5.1E-8 T 22-04-2016 IPR023885 4Fe4S-binding SPASM domain SII_RS03435 4ad8a50ce065e1f135d5a3eb96987788 341 SMART SM00729 22 224 0.0039 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 SII_RS03435 4ad8a50ce065e1f135d5a3eb96987788 341 SUPERFAMILY SSF102114 21 305 1.7E-46 T 22-04-2016 SII_RS03435 4ad8a50ce065e1f135d5a3eb96987788 341 PANTHER PTHR11228 24 336 1.8E-35 T 22-04-2016 SII_RS03940 e4dfdde183ab0ba0305df9edfef2d2cc 274 SUPERFAMILY SSF53474 4 271 4.88E-43 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SII_RS03940 e4dfdde183ab0ba0305df9edfef2d2cc 274 Pfam PF00756 Putative esterase 20 268 4.7E-25 T 22-04-2016 IPR000801 Putative esterase SII_RS03940 e4dfdde183ab0ba0305df9edfef2d2cc 274 PANTHER PTHR10907 18 209 2.2E-67 T 22-04-2016 SII_RS03940 e4dfdde183ab0ba0305df9edfef2d2cc 274 Gene3D G3DSA:3.40.50.1820 8 274 7.4E-46 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SII_RS03940 e4dfdde183ab0ba0305df9edfef2d2cc 274 PANTHER PTHR10907:SF58 18 209 2.2E-67 T 22-04-2016 SII_RS03250 b375587106716f68199110c572bd46de 472 SUPERFAMILY SSF47598 417 464 6.89E-23 T 22-04-2016 IPR010985 Ribbon-helix-helix GO:0006355 SII_RS03250 b375587106716f68199110c572bd46de 472 SUPERFAMILY SSF47413 11 63 2.53E-11 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SII_RS03250 b375587106716f68199110c572bd46de 472 Gene3D G3DSA:1.10.1220.10 417 464 9.7E-34 T 22-04-2016 IPR013321 Arc-type ribbon-helix-helix GO:0006355 SII_RS03250 b375587106716f68199110c572bd46de 472 Pfam PF01381 Helix-turn-helix 15 53 5.2E-10 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SII_RS03250 b375587106716f68199110c572bd46de 472 Pfam PF02486 Replication initiation factor 169 372 5.8E-69 T 22-04-2016 IPR003491 Replication initiation factor GO:0003677|GO:0003916|GO:0006270 SII_RS03250 b375587106716f68199110c572bd46de 472 Gene3D G3DSA:1.10.260.40 14 63 8.0E-12 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SII_RS03250 b375587106716f68199110c572bd46de 472 SMART SM00530 14 69 2.6E-8 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SII_RS03250 b375587106716f68199110c572bd46de 472 Pfam PF07764 Omega Transcriptional Repressor 414 464 2.1E-30 T 22-04-2016 IPR011686 Omega transcriptional repressor SII_RS04510 096604452e991dfb31f85a22fad4c08c 303 Pfam PF14527 WhiA LAGLIDADG-like domain 122 214 3.7E-30 T 22-04-2016 SII_RS04510 096604452e991dfb31f85a22fad4c08c 303 Pfam PF02650 WhiA C-terminal HTH domain 218 300 1.0E-30 T 22-04-2016 IPR023054 Sporulation regulator WhiA, C-terminal SII_RS04510 096604452e991dfb31f85a22fad4c08c 303 SUPERFAMILY SSF55608 116 217 6.23E-14 T 22-04-2016 IPR027434 Homing endonuclease GO:0004519 SII_RS04510 096604452e991dfb31f85a22fad4c08c 303 Hamap MF_01420 Putative sporulation transcription regulator WhiA [whiA]. 3 303 29.53 T 22-04-2016 IPR003802 Sporulation regulator WhiA GO:0043937 SII_RS04510 096604452e991dfb31f85a22fad4c08c 303 PANTHER PTHR37307 2 303 9.9E-110 T 22-04-2016 SII_RS04510 096604452e991dfb31f85a22fad4c08c 303 Pfam PF10298 WhiA N-terminal LAGLIDADG-like domain 17 99 2.2E-30 T 22-04-2016 IPR018478 Sporulation transcription regulator WhiA, N-terminal domain SII_RS04510 096604452e991dfb31f85a22fad4c08c 303 TIGRFAM TIGR00647 DNA_bind_WhiA: DNA-binding protein WhiA 5 301 3.0E-110 T 22-04-2016 SII_RS04510 096604452e991dfb31f85a22fad4c08c 303 Gene3D G3DSA:3.10.28.10 113 197 4.8E-7 T 22-04-2016 IPR027434 Homing endonuclease GO:0004519 SII_RS05505 3c0a167634072a7fc45e34662f7e5e51 206 Pfam PF04854 Protein of unknown function, DUF624 18 89 5.3E-12 T 22-04-2016 IPR006938 Protein of unknown function DUF624 SII_RS06425 e8586539f03c791a55ed3baa46552ef8 374 PANTHER PTHR21716:SF10 7 368 4.8E-139 T 22-04-2016 SII_RS06425 e8586539f03c791a55ed3baa46552ef8 374 Pfam PF01594 Domain of unknown function DUF20 19 348 5.4E-85 T 22-04-2016 IPR002549 Transmembrane protein TqsA-like SII_RS06425 e8586539f03c791a55ed3baa46552ef8 374 PANTHER PTHR21716 7 368 4.8E-139 T 22-04-2016 IPR002549 Transmembrane protein TqsA-like SII_RS06700 3d4788312493a4a5e68926b5fb7852ef 246 PANTHER PTHR13832:SF278 1 246 1.5E-60 T 22-04-2016 SII_RS06700 3d4788312493a4a5e68926b5fb7852ef 246 Gene3D G3DSA:3.60.40.10 2 239 6.3E-63 T 22-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 SII_RS06700 3d4788312493a4a5e68926b5fb7852ef 246 Pfam PF13672 Protein phosphatase 2C 12 212 3.5E-16 T 22-04-2016 SII_RS06700 3d4788312493a4a5e68926b5fb7852ef 246 PANTHER PTHR13832 1 246 1.5E-60 T 22-04-2016 IPR015655 Protein phosphatase 2C family GO:0004722|GO:0006470 KEGG: 04660+3.1.3.16 SII_RS06700 3d4788312493a4a5e68926b5fb7852ef 246 SUPERFAMILY SSF81606 2 240 1.06E-59 T 22-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 SII_RS06700 3d4788312493a4a5e68926b5fb7852ef 246 SMART SM00332 1 238 2.8E-16 T 22-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 SII_RS06700 3d4788312493a4a5e68926b5fb7852ef 246 SMART SM00331 7 240 1.1E-36 T 22-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 SII_RS01290 1438a147d8b678e3143c6eef638ea025 106 SUPERFAMILY SSF52794 4 105 2.33E-35 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 SII_RS01290 1438a147d8b678e3143c6eef638ea025 106 PANTHER PTHR34581 5 106 2.2E-41 T 22-04-2016 SII_RS01290 1438a147d8b678e3143c6eef638ea025 106 PANTHER PTHR34581:SF1 5 106 2.2E-41 T 22-04-2016 SII_RS01290 1438a147d8b678e3143c6eef638ea025 106 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 6 98 6.9E-22 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 SII_RS01290 1438a147d8b678e3143c6eef638ea025 106 Gene3D G3DSA:3.40.50.270 2 105 2.8E-38 T 22-04-2016 SII_RS02610 c5f0abe137f53e7b56819957b26663bb 57 SUPERFAMILY SSF46785 2 55 1.03E-8 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SII_RS02610 c5f0abe137f53e7b56819957b26663bb 57 Gene3D G3DSA:1.10.10.10 2 54 4.8E-10 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SII_RS02610 c5f0abe137f53e7b56819957b26663bb 57 Pfam PF00392 Bacterial regulatory proteins, gntR family 3 52 4.6E-5 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SII_RS07165 fd8abd2b3bd94d72ec48ff9744a3c50d 270 Gene3D G3DSA:3.40.50.1000 171 270 8.4E-53 T 22-04-2016 IPR023214 HAD-like domain SII_RS07165 fd8abd2b3bd94d72ec48ff9744a3c50d 270 Gene3D G3DSA:3.40.50.1000 1 73 8.4E-53 T 22-04-2016 IPR023214 HAD-like domain SII_RS07165 fd8abd2b3bd94d72ec48ff9744a3c50d 270 PANTHER PTHR10000 1 270 1.9E-112 T 22-04-2016 SII_RS07165 fd8abd2b3bd94d72ec48ff9744a3c50d 270 ProSitePatterns PS01228 Hypothetical cof family signature 1. 5 16 - T 22-04-2016 IPR000150 Cof protein GO:0016787 SII_RS07165 fd8abd2b3bd94d72ec48ff9744a3c50d 270 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 6 237 2.0E-30 T 22-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 SII_RS07165 fd8abd2b3bd94d72ec48ff9744a3c50d 270 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 263 4.1E-52 T 22-04-2016 IPR000150 Cof protein GO:0016787 SII_RS07165 fd8abd2b3bd94d72ec48ff9744a3c50d 270 SUPERFAMILY SSF56784 1 269 2.42E-66 T 22-04-2016 IPR023214 HAD-like domain SII_RS07165 fd8abd2b3bd94d72ec48ff9744a3c50d 270 PANTHER PTHR10000:SF23 1 270 1.9E-112 T 22-04-2016 SII_RS07165 fd8abd2b3bd94d72ec48ff9744a3c50d 270 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 265 2.0E-61 T 22-04-2016 IPR023214 HAD-like domain SII_RS05270 4b3f2b0d0c43383ce699d89b5966ade6 236 TIGRFAM TIGR00107 deoD: purine nucleoside phosphorylase 4 232 4.4E-89 T 22-04-2016 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 SII_RS05270 4b3f2b0d0c43383ce699d89b5966ade6 236 Gene3D G3DSA:3.40.50.1580 8 234 1.4E-80 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 SII_RS05270 4b3f2b0d0c43383ce699d89b5966ade6 236 Hamap MF_01627 Purine nucleoside phosphorylase DeoD-type [deoD]. 1 235 43.057 T 22-04-2016 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 SII_RS05270 4b3f2b0d0c43383ce699d89b5966ade6 236 PANTHER PTHR21234 1 236 2.2E-65 T 22-04-2016 IPR018017 Nucleoside phosphorylase SII_RS05270 4b3f2b0d0c43383ce699d89b5966ade6 236 PANTHER PTHR21234:SF8 1 236 2.2E-65 T 22-04-2016 SII_RS05270 4b3f2b0d0c43383ce699d89b5966ade6 236 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 61 76 - T 22-04-2016 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 SII_RS05270 4b3f2b0d0c43383ce699d89b5966ade6 236 SUPERFAMILY SSF53167 2 234 3.53E-86 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 SII_RS05270 4b3f2b0d0c43383ce699d89b5966ade6 236 Pfam PF01048 Phosphorylase superfamily 16 219 2.8E-41 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 SII_RS04750 51fafe688bcf712031ce9508c88789bd 274 PANTHER PTHR31756 7 262 6.8E-86 T 22-04-2016 SII_RS04750 51fafe688bcf712031ce9508c88789bd 274 Hamap MF_00921 Putative pyruvate, phosphate dikinase regulatory protein. 5 269 55.013 T 22-04-2016 IPR026565 Putative pyruvate, phosphate dikinase regulatory protein SII_RS04750 51fafe688bcf712031ce9508c88789bd 274 PANTHER PTHR31756:SF3 7 262 6.8E-86 T 22-04-2016 SII_RS04750 51fafe688bcf712031ce9508c88789bd 274 Pfam PF03618 Kinase/pyrophosphorylase 7 262 5.4E-87 T 22-04-2016 IPR005177 Bifunctional kinase-pyrophosphorylase GO:0005524|GO:0016772 SII_RS04160 101546b9965efb021742973c7fcb5140 236 PANTHER PTHR31272:SF4 1 236 2.6E-73 T 22-04-2016 SII_RS04160 101546b9965efb021742973c7fcb5140 236 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 10 224 1.5E-57 T 22-04-2016 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 SII_RS04160 101546b9965efb021742973c7fcb5140 236 PANTHER PTHR31272 1 236 2.6E-73 T 22-04-2016 SII_RS03020 3076cf63ce86fea2bd80602bff388a8e 225 SUPERFAMILY SSF52540 1 222 2.74E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS03020 3076cf63ce86fea2bd80602bff388a8e 225 Hamap MF_00238 Cytidylate kinase [cmk]. 4 223 33.087 T 22-04-2016 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 SII_RS03020 3076cf63ce86fea2bd80602bff388a8e 225 Gene3D G3DSA:3.40.50.300 3 219 4.0E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS03020 3076cf63ce86fea2bd80602bff388a8e 225 TIGRFAM TIGR00017 cmk: cytidylate kinase 3 217 5.3E-75 T 22-04-2016 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 SII_RS03020 3076cf63ce86fea2bd80602bff388a8e 225 PANTHER PTHR21299 6 223 9.9E-75 T 22-04-2016 SII_RS03020 3076cf63ce86fea2bd80602bff388a8e 225 Pfam PF02224 Cytidylate kinase 6 220 2.2E-72 T 22-04-2016 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 SII_RS06815 e041982c08da0c3372061d6cfd4c0af0 74 Pfam PF13268 Protein of unknown function (DUF4059) 1 72 3.2E-31 T 22-04-2016 IPR025134 Protein of unknown function DUF4059 SII_RS03460 674ce526d448ca4b20895053562c1d33 524 SMART SM00382 347 523 7.7E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain SII_RS03460 674ce526d448ca4b20895053562c1d33 524 PANTHER PTHR24221:SF138 1 495 1.8E-45 T 22-04-2016 SII_RS03460 674ce526d448ca4b20895053562c1d33 524 Pfam PF00005 ABC transporter 340 481 1.4E-27 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SII_RS03460 674ce526d448ca4b20895053562c1d33 524 ProSitePatterns PS00211 ABC transporters family signature. 453 467 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SII_RS03460 674ce526d448ca4b20895053562c1d33 524 SUPERFAMILY SSF52540 322 521 4.82E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS03460 674ce526d448ca4b20895053562c1d33 524 Gene3D G3DSA:3.40.50.300 324 521 2.3E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS03460 674ce526d448ca4b20895053562c1d33 524 SUPERFAMILY SSF90123 10 307 7.06E-32 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SII_RS03460 674ce526d448ca4b20895053562c1d33 524 Gene3D G3DSA:1.20.1560.10 10 307 4.2E-22 T 22-04-2016 SII_RS03460 674ce526d448ca4b20895053562c1d33 524 Pfam PF00664 ABC transporter transmembrane region 15 279 2.9E-6 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SII_RS03460 674ce526d448ca4b20895053562c1d33 524 PANTHER PTHR24221 1 495 1.8E-45 T 22-04-2016 SII_RS08185 ef3d25169f4b55299d6dae5960c77b4a 276 Pfam PF03613 PTS system mannose/fructose/sorbose family IID component 3 270 2.5E-92 T 22-04-2016 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 SII_RS08185 ef3d25169f4b55299d6dae5960c77b4a 276 PANTHER PTHR32502:SF5 3 270 9.3E-44 T 22-04-2016 SII_RS08185 ef3d25169f4b55299d6dae5960c77b4a 276 PANTHER PTHR32502 3 270 9.3E-44 T 22-04-2016 SII_RS01255 94cf139c7e420e33a0dd44dd9a69a511 311 Gene3D G3DSA:2.170.150.20 165 310 2.3E-57 T 22-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 SII_RS01255 94cf139c7e420e33a0dd44dd9a69a511 311 SUPERFAMILY SSF51316 169 309 4.6E-56 T 22-04-2016 IPR011057 Mss4-like SII_RS01255 94cf139c7e420e33a0dd44dd9a69a511 311 PANTHER PTHR10173 1 144 6.5E-99 T 22-04-2016 IPR028427 Peptide methionine sulfoxide reductase GO:0006979|GO:0016671|GO:0030091 SII_RS01255 94cf139c7e420e33a0dd44dd9a69a511 311 PANTHER PTHR10173 273 311 6.5E-99 T 22-04-2016 IPR028427 Peptide methionine sulfoxide reductase GO:0006979|GO:0016671|GO:0030091 SII_RS01255 94cf139c7e420e33a0dd44dd9a69a511 311 Pfam PF01641 SelR domain 175 293 1.1E-45 T 22-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 SII_RS01255 94cf139c7e420e33a0dd44dd9a69a511 311 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 3 150 5.7E-50 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 SII_RS01255 94cf139c7e420e33a0dd44dd9a69a511 311 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 1 156 34.9 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 SII_RS01255 94cf139c7e420e33a0dd44dd9a69a511 311 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 170 303 6.0E-62 T 22-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 SII_RS01255 94cf139c7e420e33a0dd44dd9a69a511 311 SUPERFAMILY SSF55068 2 161 8.63E-61 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 SII_RS01255 94cf139c7e420e33a0dd44dd9a69a511 311 PANTHER PTHR10173:SF40 1 144 6.5E-99 T 22-04-2016 SII_RS01255 94cf139c7e420e33a0dd44dd9a69a511 311 PANTHER PTHR10173:SF40 273 311 6.5E-99 T 22-04-2016 SII_RS01255 94cf139c7e420e33a0dd44dd9a69a511 311 Pfam PF01625 Peptide methionine sulfoxide reductase 3 151 4.0E-57 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 SII_RS01255 94cf139c7e420e33a0dd44dd9a69a511 311 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 163 295 35.296 T 22-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 SII_RS01255 94cf139c7e420e33a0dd44dd9a69a511 311 Gene3D G3DSA:3.30.1060.10 2 151 3.5E-62 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 SII_RS02380 c0bfd5922368e8ce6ff312e7cede5699 164 PANTHER PTHR33445 9 164 1.2E-37 T 22-04-2016 SII_RS02380 c0bfd5922368e8ce6ff312e7cede5699 164 SUPERFAMILY SSF81573 68 126 9.02E-6 T 22-04-2016 IPR028987 F-type ATP synthase subunit B-like, membrane domain SII_RS02380 c0bfd5922368e8ce6ff312e7cede5699 164 Hamap MF_01398 ATP synthase subunit b [atpF]. 1 161 13.139 T 22-04-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 SII_RS02380 c0bfd5922368e8ce6ff312e7cede5699 164 Pfam PF00430 ATP synthase B/B' CF(0) 12 141 1.1E-31 T 22-04-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 SII_RS02380 c0bfd5922368e8ce6ff312e7cede5699 164 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 16 161 1.1E-39 T 22-04-2016 IPR005864 ATPase, F0 complex, subunit B, bacterial GO:0015078|GO:0015986|GO:0045263 SII_RS04225 ee56059abf083998d2b3ec06c1965cff 399 SMART SM00316 277 348 1.4E-28 T 22-04-2016 IPR022967 RNA-binding domain, S1 SII_RS04225 ee56059abf083998d2b3ec06c1965cff 399 SMART SM00316 15 91 2.7E-5 T 22-04-2016 IPR022967 RNA-binding domain, S1 SII_RS04225 ee56059abf083998d2b3ec06c1965cff 399 SMART SM00316 192 262 2.5E-26 T 22-04-2016 IPR022967 RNA-binding domain, S1 SII_RS04225 ee56059abf083998d2b3ec06c1965cff 399 SMART SM00316 105 173 3.6E-9 T 22-04-2016 IPR022967 RNA-binding domain, S1 SII_RS04225 ee56059abf083998d2b3ec06c1965cff 399 SUPERFAMILY SSF50249 192 279 3.58E-25 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SII_RS04225 ee56059abf083998d2b3ec06c1965cff 399 SUPERFAMILY SSF50249 262 351 5.74E-27 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SII_RS04225 ee56059abf083998d2b3ec06c1965cff 399 PANTHER PTHR10724 118 388 1.2E-91 T 22-04-2016 SII_RS04225 ee56059abf083998d2b3ec06c1965cff 399 SUPERFAMILY SSF50249 4 114 8.21E-12 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SII_RS04225 ee56059abf083998d2b3ec06c1965cff 399 Pfam PF00575 S1 RNA binding domain 190 262 5.0E-22 T 22-04-2016 IPR003029 S1 domain GO:0003676 SII_RS04225 ee56059abf083998d2b3ec06c1965cff 399 Pfam PF00575 S1 RNA binding domain 14 74 5.7E-7 T 22-04-2016 IPR003029 S1 domain GO:0003676 SII_RS04225 ee56059abf083998d2b3ec06c1965cff 399 Pfam PF00575 S1 RNA binding domain 275 348 1.6E-25 T 22-04-2016 IPR003029 S1 domain GO:0003676 SII_RS04225 ee56059abf083998d2b3ec06c1965cff 399 Pfam PF00575 S1 RNA binding domain 106 173 4.6E-11 T 22-04-2016 IPR003029 S1 domain GO:0003676 SII_RS04225 ee56059abf083998d2b3ec06c1965cff 399 Gene3D G3DSA:2.40.50.140 194 274 2.6E-28 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SII_RS04225 ee56059abf083998d2b3ec06c1965cff 399 PRINTS PR00681 Ribosomal protein S1 signature 128 145 3.0E-38 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 SII_RS04225 ee56059abf083998d2b3ec06c1965cff 399 PRINTS PR00681 Ribosomal protein S1 signature 110 126 3.0E-38 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 SII_RS04225 ee56059abf083998d2b3ec06c1965cff 399 PRINTS PR00681 Ribosomal protein S1 signature 17 35 3.0E-38 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 SII_RS04225 ee56059abf083998d2b3ec06c1965cff 399 PRINTS PR00681 Ribosomal protein S1 signature 292 311 3.0E-38 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 SII_RS04225 ee56059abf083998d2b3ec06c1965cff 399 PRINTS PR00681 Ribosomal protein S1 signature 214 235 3.0E-38 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 SII_RS04225 ee56059abf083998d2b3ec06c1965cff 399 PRINTS PR00681 Ribosomal protein S1 signature 157 177 3.0E-38 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 SII_RS04225 ee56059abf083998d2b3ec06c1965cff 399 PRINTS PR00681 Ribosomal protein S1 signature 331 349 3.0E-38 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 SII_RS04225 ee56059abf083998d2b3ec06c1965cff 399 Gene3D G3DSA:2.40.50.140 9 82 2.7E-11 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SII_RS04225 ee56059abf083998d2b3ec06c1965cff 399 Gene3D G3DSA:2.40.50.140 106 174 1.9E-14 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SII_RS04225 ee56059abf083998d2b3ec06c1965cff 399 Gene3D G3DSA:2.40.50.140 275 349 8.4E-32 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SII_RS04225 ee56059abf083998d2b3ec06c1965cff 399 SUPERFAMILY SSF50249 106 186 1.88E-14 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SII_RS07410 5deddd2b4effba83533ea153c51b843a 100 Hamap MF_00122 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C [gatC]. 2 95 23.952 T 22-04-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 SII_RS07410 5deddd2b4effba83533ea153c51b843a 100 SUPERFAMILY SSF141000 2 93 1.7E-28 T 22-04-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 SII_RS07410 5deddd2b4effba83533ea153c51b843a 100 Pfam PF02686 Glu-tRNAGln amidotransferase C subunit 19 90 2.4E-19 T 22-04-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 SII_RS07410 5deddd2b4effba83533ea153c51b843a 100 PANTHER PTHR15004:SF0 1 96 1.8E-31 T 22-04-2016 SII_RS07410 5deddd2b4effba83533ea153c51b843a 100 PANTHER PTHR15004 1 96 1.8E-31 T 22-04-2016 SII_RS07410 5deddd2b4effba83533ea153c51b843a 100 TIGRFAM TIGR00135 gatC: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit 3 95 3.9E-29 T 22-04-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 SII_RS04475 b325482e45d0376f9e5e1f7625978e51 319 TIGRFAM TIGR00744 ROK_glcA_fam: ROK family protein (putative glucokinase) 6 317 8.1E-105 T 22-04-2016 IPR004654 Glucokinase ROK GO:0004340|GO:0005737|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 SII_RS04475 b325482e45d0376f9e5e1f7625978e51 319 Pfam PF00480 ROK family 6 319 6.9E-76 T 22-04-2016 IPR000600 ROK family SII_RS04475 b325482e45d0376f9e5e1f7625978e51 319 Gene3D G3DSA:3.30.420.40 3 144 9.7E-47 T 22-04-2016 SII_RS04475 b325482e45d0376f9e5e1f7625978e51 319 SUPERFAMILY SSF53067 4 319 3.4E-70 T 22-04-2016 SII_RS04475 b325482e45d0376f9e5e1f7625978e51 319 PANTHER PTHR18964:SF123 1 319 5.8E-111 T 22-04-2016 SII_RS04475 b325482e45d0376f9e5e1f7625978e51 319 Gene3D G3DSA:3.30.420.40 145 302 1.2E-54 T 22-04-2016 SII_RS04475 b325482e45d0376f9e5e1f7625978e51 319 PANTHER PTHR18964 1 319 5.8E-111 T 22-04-2016 SII_RS04475 b325482e45d0376f9e5e1f7625978e51 319 ProSitePatterns PS01125 ROK family signature. 139 166 - T 22-04-2016 IPR000600 ROK family SII_RS03560 115fcbe033a3cbf4a7c24c2b3edf0287 428 Gene3D G3DSA:3.30.360.10 150 300 1.5E-56 T 22-04-2016 SII_RS03560 115fcbe033a3cbf4a7c24c2b3edf0287 428 SUPERFAMILY SSF55347 138 303 9.15E-52 T 22-04-2016 SII_RS03560 115fcbe033a3cbf4a7c24c2b3edf0287 428 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 184 206 - T 22-04-2016 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 SII_RS03560 115fcbe033a3cbf4a7c24c2b3edf0287 428 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 9 130 4.3E-16 T 22-04-2016 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 SII_RS03560 115fcbe033a3cbf4a7c24c2b3edf0287 428 SUPERFAMILY SSF51735 3 159 1.29E-32 T 22-04-2016 IPR016040 NAD(P)-binding domain SII_RS03560 115fcbe033a3cbf4a7c24c2b3edf0287 428 Gene3D G3DSA:3.40.50.720 2 149 9.2E-46 T 22-04-2016 IPR016040 NAD(P)-binding domain SII_RS03560 115fcbe033a3cbf4a7c24c2b3edf0287 428 Pfam PF00742 Homoserine dehydrogenase 138 316 9.7E-62 T 22-04-2016 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 SII_RS03560 115fcbe033a3cbf4a7c24c2b3edf0287 428 SUPERFAMILY SSF55021 349 414 5.41E-6 T 22-04-2016 SII_RS03560 115fcbe033a3cbf4a7c24c2b3edf0287 428 PANTHER PTHR21499 1 370 3.4E-135 T 22-04-2016 SII_RS03560 115fcbe033a3cbf4a7c24c2b3edf0287 428 PANTHER PTHR21499:SF2 1 370 3.4E-135 T 22-04-2016 SII_RS03560 115fcbe033a3cbf4a7c24c2b3edf0287 428 PIRSF PIRSF000098 1 428 9.0E-166 T 22-04-2016 IPR016204 Homoserine dehydrogenase GO:0004412|GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 SII_RS00275 6c4153f1826423165dd0062636214afb 162 PANTHER PTHR23046 1 162 1.6E-88 T 22-04-2016 SII_RS00275 6c4153f1826423165dd0062636214afb 162 SUPERFAMILY SSF52255 4 160 1.19E-65 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 SII_RS00275 6c4153f1826423165dd0062636214afb 162 PANTHER PTHR23046:SF2 1 162 1.6E-88 T 22-04-2016 SII_RS00275 6c4153f1826423165dd0062636214afb 162 Gene3D G3DSA:3.40.50.7700 2 161 1.9E-74 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 SII_RS00275 6c4153f1826423165dd0062636214afb 162 PIRSF PIRSF001338 1 162 1.3E-68 T 22-04-2016 IPR024694 N5-carboxyaminoimidazole ribonucleotide mutase PurE GO:0006189|GO:0034023 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234|UniPathway: UPA00074 SII_RS00275 6c4153f1826423165dd0062636214afb 162 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 5 157 8.4E-65 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 SII_RS00275 6c4153f1826423165dd0062636214afb 162 Pfam PF00731 AIR carboxylase 5 150 1.4E-63 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 SII_RS00275 6c4153f1826423165dd0062636214afb 162 SMART SM01001 3 154 3.3E-97 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 SII_RS00275 6c4153f1826423165dd0062636214afb 162 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 5 158 32.19 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 SII_RS05685 d86ae82727f3065d233f70edcb702461 187 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 7 169 3.4E-10 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SII_RS05685 d86ae82727f3065d233f70edcb702461 187 Gene3D G3DSA:1.10.150.240 16 79 3.0E-31 T 22-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 SII_RS05685 d86ae82727f3065d233f70edcb702461 187 PANTHER PTHR18901 7 186 9.7E-15 T 22-04-2016 SII_RS05685 d86ae82727f3065d233f70edcb702461 187 Gene3D G3DSA:3.40.50.1000 1 15 9.2E-29 T 22-04-2016 IPR023214 HAD-like domain SII_RS05685 d86ae82727f3065d233f70edcb702461 187 Gene3D G3DSA:3.40.50.1000 80 182 9.2E-29 T 22-04-2016 IPR023214 HAD-like domain SII_RS05685 d86ae82727f3065d233f70edcb702461 187 SUPERFAMILY SSF56784 1 179 4.91E-34 T 22-04-2016 IPR023214 HAD-like domain SII_RS05685 d86ae82727f3065d233f70edcb702461 187 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 172 1.9E-17 T 22-04-2016 IPR023214 HAD-like domain SII_RS08850 1dc617f9eda83e3d0b2ebf9aeda8fafe 343 SMART SM00387 233 343 9.0E-26 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SII_RS08850 1dc617f9eda83e3d0b2ebf9aeda8fafe 343 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 236 342 2.6E-22 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SII_RS08850 1dc617f9eda83e3d0b2ebf9aeda8fafe 343 Pfam PF00512 His Kinase A (phospho-acceptor) domain 120 176 1.3E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SII_RS08850 1dc617f9eda83e3d0b2ebf9aeda8fafe 343 SUPERFAMILY SSF47384 104 178 4.9E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SII_RS08850 1dc617f9eda83e3d0b2ebf9aeda8fafe 343 SMART SM00388 119 185 2.1E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SII_RS08850 1dc617f9eda83e3d0b2ebf9aeda8fafe 343 PRINTS PR00344 Bacterial sensor protein C-terminal signature 329 342 6.6E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SII_RS08850 1dc617f9eda83e3d0b2ebf9aeda8fafe 343 PRINTS PR00344 Bacterial sensor protein C-terminal signature 270 284 6.6E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SII_RS08850 1dc617f9eda83e3d0b2ebf9aeda8fafe 343 PRINTS PR00344 Bacterial sensor protein C-terminal signature 288 298 6.6E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SII_RS08850 1dc617f9eda83e3d0b2ebf9aeda8fafe 343 PRINTS PR00344 Bacterial sensor protein C-terminal signature 305 323 6.6E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SII_RS08850 1dc617f9eda83e3d0b2ebf9aeda8fafe 343 Gene3D G3DSA:3.30.565.10 193 339 8.9E-38 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SII_RS08850 1dc617f9eda83e3d0b2ebf9aeda8fafe 343 PANTHER PTHR24423 53 341 2.4E-65 T 22-04-2016 SII_RS08850 1dc617f9eda83e3d0b2ebf9aeda8fafe 343 Gene3D G3DSA:1.10.287.130 112 176 2.4E-18 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SII_RS08850 1dc617f9eda83e3d0b2ebf9aeda8fafe 343 SUPERFAMILY SSF55874 184 341 1.1E-36 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SII_RS04860 0d8ec4cd5e7254c93d20c19d928df414 289 SUPERFAMILY SSF53448 1 286 5.86E-94 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SII_RS04860 0d8ec4cd5e7254c93d20c19d928df414 289 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 2 286 8.7E-154 T 22-04-2016 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 SII_RS04860 0d8ec4cd5e7254c93d20c19d928df414 289 PANTHER PTHR22572:SF105 2 266 4.9E-183 T 22-04-2016 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 SII_RS04860 0d8ec4cd5e7254c93d20c19d928df414 289 Gene3D G3DSA:3.90.550.10 1 264 9.7E-73 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SII_RS04860 0d8ec4cd5e7254c93d20c19d928df414 289 Pfam PF00483 Nucleotidyl transferase 2 237 2.5E-73 T 22-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 SII_RS04860 0d8ec4cd5e7254c93d20c19d928df414 289 PANTHER PTHR22572 2 266 4.9E-183 T 22-04-2016 SII_RS07140 9c8780915179a36df674087a8660a164 367 TIGRFAM TIGR00350 lytR_cpsA_psr: cell envelope-related function transcriptional attenuator common domain 75 229 6.5E-43 T 22-04-2016 IPR004474 Cell envelope-related transcriptional attenuator domain SII_RS07140 9c8780915179a36df674087a8660a164 367 Pfam PF03816 Cell envelope-related transcriptional attenuator domain 76 229 6.8E-47 T 22-04-2016 IPR004474 Cell envelope-related transcriptional attenuator domain SII_RS07140 9c8780915179a36df674087a8660a164 367 PANTHER PTHR33392 1 332 1.4E-141 T 22-04-2016 SII_RS07140 9c8780915179a36df674087a8660a164 367 PANTHER PTHR33392:SF5 1 332 1.4E-141 T 22-04-2016 SII_RS03180 e714651e58e6e81d84b80f44033ab7a2 214 Pfam PF13338 Transcriptional regulator, AbiEi antitoxin 46 116 2.4E-15 T 22-04-2016 IPR025159 Transcriptional regulator, AbiEi antitoxin SII_RS01030 6d59b605ef7558102eef977c2d901b75 227 SUPERFAMILY SSF53067 1 99 7.34E-25 T 22-04-2016 SII_RS01030 6d59b605ef7558102eef977c2d901b75 227 PANTHER PTHR11735 1 126 1.0E-42 T 22-04-2016 SII_RS01030 6d59b605ef7558102eef977c2d901b75 227 SUPERFAMILY SSF53067 106 202 6.22E-8 T 22-04-2016 SII_RS01030 6d59b605ef7558102eef977c2d901b75 227 Gene3D G3DSA:3.30.420.40 119 169 2.3E-5 T 22-04-2016 SII_RS01030 6d59b605ef7558102eef977c2d901b75 227 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 3 204 5.0E-48 T 22-04-2016 IPR022496 tRNA threonylcarbamoyl adenosine modification protein YeaZ GO:0002949 SII_RS01030 6d59b605ef7558102eef977c2d901b75 227 Pfam PF00814 Glycoprotease family 31 144 5.5E-27 T 22-04-2016 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 SII_RS01030 6d59b605ef7558102eef977c2d901b75 227 Gene3D G3DSA:3.30.420.40 1 118 1.7E-36 T 22-04-2016 SII_RS01030 6d59b605ef7558102eef977c2d901b75 227 PANTHER PTHR11735:SF11 1 126 1.0E-42 T 22-04-2016 SII_RS04825 0a3050f31d1bc572c1a9ca83050a2f92 332 Pfam PF13439 Glycosyltransferase Family 4 42 139 4.8E-14 T 22-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain SII_RS04825 0a3050f31d1bc572c1a9ca83050a2f92 332 Gene3D G3DSA:3.40.50.2000 126 266 1.6E-14 T 22-04-2016 SII_RS04825 0a3050f31d1bc572c1a9ca83050a2f92 332 SUPERFAMILY SSF53756 16 330 3.51E-45 T 22-04-2016 SII_RS04825 0a3050f31d1bc572c1a9ca83050a2f92 332 PANTHER PTHR12526 42 331 1.1E-30 T 22-04-2016 SII_RS04825 0a3050f31d1bc572c1a9ca83050a2f92 332 Pfam PF00534 Glycosyl transferases group 1 151 304 1.3E-11 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 SII_RS04825 0a3050f31d1bc572c1a9ca83050a2f92 332 PANTHER PTHR12526:SF394 42 331 1.1E-30 T 22-04-2016 SII_RS05375 0f97c28ac5067167e41b63bd37128ad2 201 Gene3D G3DSA:3.40.109.10 1 199 1.9E-56 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 SII_RS05375 0f97c28ac5067167e41b63bd37128ad2 201 PANTHER PTHR23026 1 201 2.6E-51 T 22-04-2016 SII_RS05375 0f97c28ac5067167e41b63bd37128ad2 201 PANTHER PTHR23026:SF115 1 201 2.6E-51 T 22-04-2016 SII_RS05375 0f97c28ac5067167e41b63bd37128ad2 201 SUPERFAMILY SSF55469 1 198 6.02E-50 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 SII_RS05375 0f97c28ac5067167e41b63bd37128ad2 201 Pfam PF00881 Nitroreductase family 8 181 4.8E-30 T 22-04-2016 IPR029479 Nitroreductase SII_RS06760 1dd53cad7a71cbe42fc7f68b9fcf0d10 113 PIRSF PIRSF029938 1 110 8.2E-43 T 22-04-2016 IPR011229 Cell cycle protein GpsB SII_RS06760 1dd53cad7a71cbe42fc7f68b9fcf0d10 113 PANTHER PTHR35794:SF1 1 111 1.2E-44 T 22-04-2016 SII_RS06760 1dd53cad7a71cbe42fc7f68b9fcf0d10 113 TIGRFAM TIGR03544 DivI1A_domain: DivIVA domain 7 39 2.3E-13 T 22-04-2016 IPR019933 DivIVA domain SII_RS06760 1dd53cad7a71cbe42fc7f68b9fcf0d10 113 PANTHER PTHR35794 1 111 1.2E-44 T 22-04-2016 SII_RS06760 1dd53cad7a71cbe42fc7f68b9fcf0d10 113 Pfam PF05103 DivIVA protein 6 85 4.9E-17 T 22-04-2016 IPR007793 DivIVA family SII_RS06760 1dd53cad7a71cbe42fc7f68b9fcf0d10 113 Hamap MF_02011 Cell cycle protein GpsB [gpsB]. 1 106 24.864 T 22-04-2016 IPR011229 Cell cycle protein GpsB SII_RS07225 2d04e97dec53edb0bda05956b53a99f7 159 Gene3D G3DSA:2.40.50.100 83 159 3.2E-27 T 22-04-2016 SII_RS07225 2d04e97dec53edb0bda05956b53a99f7 159 Pfam PF00364 Biotin-requiring enzyme 86 158 2.7E-19 T 22-04-2016 IPR000089 Biotin/lipoyl attachment SII_RS07225 2d04e97dec53edb0bda05956b53a99f7 159 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 1 159 1.7E-36 T 22-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 SII_RS07225 2d04e97dec53edb0bda05956b53a99f7 159 PANTHER PTHR23151:SF55 1 159 8.0E-26 T 22-04-2016 SII_RS07225 2d04e97dec53edb0bda05956b53a99f7 159 SUPERFAMILY SSF51230 85 158 7.98E-22 T 22-04-2016 IPR011053 Single hybrid motif SII_RS07225 2d04e97dec53edb0bda05956b53a99f7 159 PANTHER PTHR23151 1 159 8.0E-26 T 22-04-2016 SII_RS07225 2d04e97dec53edb0bda05956b53a99f7 159 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 115 132 - T 22-04-2016 IPR001882 Biotin-binding site SII_RS07225 2d04e97dec53edb0bda05956b53a99f7 159 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 105 119 1.2E-11 T 22-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 SII_RS07225 2d04e97dec53edb0bda05956b53a99f7 159 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 88 101 1.2E-11 T 22-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 SII_RS07225 2d04e97dec53edb0bda05956b53a99f7 159 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 120 133 1.2E-11 T 22-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 SII_RS03220 6fe8fc96bcf7d4cc7780ae92cf4e0a2f 771 SUPERFAMILY SSF52540 391 752 2.48E-23 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS03220 6fe8fc96bcf7d4cc7780ae92cf4e0a2f 771 Gene3D G3DSA:3.40.50.300 591 727 7.4E-14 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS03220 6fe8fc96bcf7d4cc7780ae92cf4e0a2f 771 Gene3D G3DSA:3.40.50.300 425 502 7.4E-14 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS03465 6cc006dd617a20ea751917c7d494f559 172 Gene3D G3DSA:2.30.30.240 99 168 1.7E-22 T 22-04-2016 SII_RS03465 6cc006dd617a20ea751917c7d494f559 172 SUPERFAMILY SSF50447 2 91 3.14E-18 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain SII_RS03465 6cc006dd617a20ea751917c7d494f559 172 Gene3D G3DSA:2.40.30.60 3 91 4.3E-12 T 22-04-2016 IPR002676 RimM protein GO:0006364 SII_RS03465 6cc006dd617a20ea751917c7d494f559 172 PANTHER PTHR33692 2 172 1.8E-57 T 22-04-2016 SII_RS03465 6cc006dd617a20ea751917c7d494f559 172 SUPERFAMILY SSF50346 99 168 1.37E-17 T 22-04-2016 IPR011033 PRC-barrel-like SII_RS03465 6cc006dd617a20ea751917c7d494f559 172 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 3 168 23.008 T 22-04-2016 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 SII_RS03465 6cc006dd617a20ea751917c7d494f559 172 Pfam PF01782 RimM N-terminal domain 6 89 6.2E-18 T 22-04-2016 IPR002676 RimM protein GO:0006364 SII_RS03465 6cc006dd617a20ea751917c7d494f559 172 PANTHER PTHR33692:SF1 2 172 1.8E-57 T 22-04-2016 SII_RS03465 6cc006dd617a20ea751917c7d494f559 172 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 4 168 4.5E-49 T 22-04-2016 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 SII_RS03465 6cc006dd617a20ea751917c7d494f559 172 Pfam PF05239 PRC-barrel domain 96 168 8.7E-11 T 22-04-2016 IPR027275 PRC-barrel domain SII_RS02020 4599f9939de124820040b3df49d83dc0 271 SUPERFAMILY SSF55174 3 71 6.18E-8 T 22-04-2016 SII_RS02020 4599f9939de124820040b3df49d83dc0 271 PIRSF PIRSF005578 1 266 1.0E-98 T 22-04-2016 IPR004538 Haemolysin A /rRNA methyltransferase TlyA GO:0003723 SII_RS02020 4599f9939de124820040b3df49d83dc0 271 PANTHER PTHR32319:SF0 1 262 4.3E-129 T 22-04-2016 SII_RS02020 4599f9939de124820040b3df49d83dc0 271 Gene3D G3DSA:3.40.50.150 94 223 3.8E-8 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SII_RS02020 4599f9939de124820040b3df49d83dc0 271 Pfam PF01728 FtsJ-like methyltransferase 62 242 5.4E-19 T 22-04-2016 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 SII_RS02020 4599f9939de124820040b3df49d83dc0 271 SUPERFAMILY SSF53335 61 255 5.4E-22 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SII_RS02020 4599f9939de124820040b3df49d83dc0 271 Gene3D G3DSA:3.10.290.10 4 93 5.1E-20 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SII_RS02020 4599f9939de124820040b3df49d83dc0 271 PANTHER PTHR32319 1 262 4.3E-129 T 22-04-2016 SII_RS02020 4599f9939de124820040b3df49d83dc0 271 TIGRFAM TIGR00478 tly: TlyA family rRNA methyltransferase/putative hemolysin 5 238 4.9E-83 T 22-04-2016 IPR004538 Haemolysin A /rRNA methyltransferase TlyA GO:0003723 SII_RS06445 1ca9792a65f743a0914dcd710ef3763b 87 PANTHER PTHR33219 1 86 1.6E-15 T 22-04-2016 SII_RS06445 1ca9792a65f743a0914dcd710ef3763b 87 Pfam PF02325 YGGT family 11 78 1.0E-17 T 22-04-2016 IPR003425 CCB3/YggT GO:0016020 SII_RS02140 c4f70c13fc0238a79936581625dd35fe 514 Pfam PF00271 Helicase conserved C-terminal domain 226 334 4.0E-29 T 22-04-2016 IPR001650 Helicase, C-terminal SII_RS02140 c4f70c13fc0238a79936581625dd35fe 514 SMART SM00490 253 334 2.1E-35 T 22-04-2016 IPR001650 Helicase, C-terminal SII_RS02140 c4f70c13fc0238a79936581625dd35fe 514 Hamap MF_01493 DEAD-box ATP-dependent RNA helicase CshA [cshA]. 1 509 44.698 T 22-04-2016 IPR030880 DEAD-box ATP-dependent RNA helicase CshA GO:0004004|GO:0005524|GO:0010501 SII_RS02140 c4f70c13fc0238a79936581625dd35fe 514 SUPERFAMILY SSF52540 71 354 2.22E-76 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS02140 c4f70c13fc0238a79936581625dd35fe 514 SMART SM00487 20 217 5.6E-64 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain SII_RS02140 c4f70c13fc0238a79936581625dd35fe 514 Gene3D G3DSA:3.40.50.300 208 368 8.9E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS02140 c4f70c13fc0238a79936581625dd35fe 514 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 148 156 - T 22-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site SII_RS02140 c4f70c13fc0238a79936581625dd35fe 514 PANTHER PTHR24031 2 513 1.7E-230 T 22-04-2016 SII_RS02140 c4f70c13fc0238a79936581625dd35fe 514 Gene3D G3DSA:3.40.50.300 2 207 1.2E-79 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS02140 c4f70c13fc0238a79936581625dd35fe 514 Pfam PF00270 DEAD/DEAH box helicase 26 190 1.8E-51 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 SII_RS02140 c4f70c13fc0238a79936581625dd35fe 514 PANTHER PTHR24031:SF261 2 513 1.7E-230 T 22-04-2016 SII_RS01015 59ab9e0db9be3596714fa227c7209c34 335 PANTHER PTHR10836:SF57 1 333 2.6E-241 T 22-04-2016 SII_RS01015 59ab9e0db9be3596714fa227c7209c34 335 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 156 313 3.3E-63 T 22-04-2016 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: REACT_474 SII_RS01015 59ab9e0db9be3596714fa227c7209c34 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 266 281 2.1E-35 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 SII_RS01015 59ab9e0db9be3596714fa227c7209c34 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 109 122 2.1E-35 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 SII_RS01015 59ab9e0db9be3596714fa227c7209c34 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 172 188 2.1E-35 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 SII_RS01015 59ab9e0db9be3596714fa227c7209c34 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 230 247 2.1E-35 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 SII_RS01015 59ab9e0db9be3596714fa227c7209c34 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 145 163 2.1E-35 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 SII_RS01015 59ab9e0db9be3596714fa227c7209c34 335 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 325 4.4E-131 T 22-04-2016 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: REACT_474|UniPathway: UPA00109 SII_RS01015 59ab9e0db9be3596714fa227c7209c34 335 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 151 3.5E-52 T 22-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 SII_RS01015 59ab9e0db9be3596714fa227c7209c34 335 SUPERFAMILY SSF55347 150 313 4.76E-66 T 22-04-2016 SII_RS01015 59ab9e0db9be3596714fa227c7209c34 335 SUPERFAMILY SSF51735 3 167 6.59E-58 T 22-04-2016 IPR016040 NAD(P)-binding domain SII_RS01015 59ab9e0db9be3596714fa227c7209c34 335 Gene3D G3DSA:3.40.50.720 1 159 9.6E-68 T 22-04-2016 IPR016040 NAD(P)-binding domain SII_RS01015 59ab9e0db9be3596714fa227c7209c34 335 SMART SM00846 3 151 3.5E-81 T 22-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 SII_RS01015 59ab9e0db9be3596714fa227c7209c34 335 Gene3D G3DSA:3.30.360.10 160 315 6.1E-70 T 22-04-2016 SII_RS01015 59ab9e0db9be3596714fa227c7209c34 335 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 149 156 - T 22-04-2016 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: REACT_474 SII_RS01015 59ab9e0db9be3596714fa227c7209c34 335 PIRSF PIRSF000149 1 335 8.0E-113 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 SII_RS01015 59ab9e0db9be3596714fa227c7209c34 335 PANTHER PTHR10836 1 333 2.6E-241 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 SII_RS08105 fc597a10de0516677bcb671bf08b2703 309 Pfam PF01297 Zinc-uptake complex component A periplasmic 35 305 2.0E-77 T 22-04-2016 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 SII_RS08105 fc597a10de0516677bcb671bf08b2703 309 Gene3D G3DSA:3.40.50.1980 26 186 6.2E-55 T 22-04-2016 SII_RS08105 fc597a10de0516677bcb671bf08b2703 309 PANTHER PTHR30477 7 305 3.3E-133 T 22-04-2016 SII_RS08105 fc597a10de0516677bcb671bf08b2703 309 PRINTS PR00690 Adhesin family signature 76 93 2.7E-62 T 22-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 SII_RS08105 fc597a10de0516677bcb671bf08b2703 309 PRINTS PR00690 Adhesin family signature 63 76 2.7E-62 T 22-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 SII_RS08105 fc597a10de0516677bcb671bf08b2703 309 PRINTS PR00690 Adhesin family signature 273 292 2.7E-62 T 22-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 SII_RS08105 fc597a10de0516677bcb671bf08b2703 309 PRINTS PR00690 Adhesin family signature 247 265 2.7E-62 T 22-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 SII_RS08105 fc597a10de0516677bcb671bf08b2703 309 PRINTS PR00690 Adhesin family signature 32 50 2.7E-62 T 22-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 SII_RS08105 fc597a10de0516677bcb671bf08b2703 309 PRINTS PR00690 Adhesin family signature 194 215 2.7E-62 T 22-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 SII_RS08105 fc597a10de0516677bcb671bf08b2703 309 Gene3D G3DSA:3.40.50.1980 187 308 5.5E-44 T 22-04-2016 SII_RS08105 fc597a10de0516677bcb671bf08b2703 309 PANTHER PTHR30477:SF12 7 305 3.3E-133 T 22-04-2016 SII_RS08105 fc597a10de0516677bcb671bf08b2703 309 PRINTS PR00691 Adhesin B signature 57 75 4.7E-106 T 22-04-2016 IPR006129 Adhesin B GO:0007155 SII_RS08105 fc597a10de0516677bcb671bf08b2703 309 PRINTS PR00691 Adhesin B signature 76 95 4.7E-106 T 22-04-2016 IPR006129 Adhesin B GO:0007155 SII_RS08105 fc597a10de0516677bcb671bf08b2703 309 PRINTS PR00691 Adhesin B signature 220 238 4.7E-106 T 22-04-2016 IPR006129 Adhesin B GO:0007155 SII_RS08105 fc597a10de0516677bcb671bf08b2703 309 PRINTS PR00691 Adhesin B signature 265 283 4.7E-106 T 22-04-2016 IPR006129 Adhesin B GO:0007155 SII_RS08105 fc597a10de0516677bcb671bf08b2703 309 PRINTS PR00691 Adhesin B signature 32 53 4.7E-106 T 22-04-2016 IPR006129 Adhesin B GO:0007155 SII_RS08105 fc597a10de0516677bcb671bf08b2703 309 PRINTS PR00691 Adhesin B signature 136 155 4.7E-106 T 22-04-2016 IPR006129 Adhesin B GO:0007155 SII_RS08105 fc597a10de0516677bcb671bf08b2703 309 PRINTS PR00691 Adhesin B signature 243 260 4.7E-106 T 22-04-2016 IPR006129 Adhesin B GO:0007155 SII_RS08105 fc597a10de0516677bcb671bf08b2703 309 PRINTS PR00691 Adhesin B signature 194 211 4.7E-106 T 22-04-2016 IPR006129 Adhesin B GO:0007155 SII_RS08105 fc597a10de0516677bcb671bf08b2703 309 PRINTS PR00691 Adhesin B signature 286 304 4.7E-106 T 22-04-2016 IPR006129 Adhesin B GO:0007155 SII_RS08105 fc597a10de0516677bcb671bf08b2703 309 SUPERFAMILY SSF53807 31 308 3.04E-90 T 22-04-2016 SII_RS05695 6a1980ad48a7d532e9a14010f6232087 410 Pfam PF01098 Cell cycle protein 17 387 2.3E-80 T 22-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 SII_RS05695 6a1980ad48a7d532e9a14010f6232087 410 PANTHER PTHR30474 4 404 1.9E-143 T 22-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 SII_RS05695 6a1980ad48a7d532e9a14010f6232087 410 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 345 369 - T 22-04-2016 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0007049|GO:0016021 SII_RS05695 6a1980ad48a7d532e9a14010f6232087 410 PANTHER PTHR30474:SF1 4 404 1.9E-143 T 22-04-2016 IPR011923 Rod shape-determining protein RodA GO:0008360|GO:0016021 SII_RS01725 c031bff8896b01da33fe4f1adf5c4304 271 PANTHER PTHR15822:SF7 3 270 7.1E-18 T 22-04-2016 SII_RS01725 c031bff8896b01da33fe4f1adf5c4304 271 SUPERFAMILY SSF56219 3 266 8.51E-31 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase SII_RS01725 c031bff8896b01da33fe4f1adf5c4304 271 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 6 262 3.3E-20 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase SII_RS01725 c031bff8896b01da33fe4f1adf5c4304 271 Gene3D G3DSA:3.60.10.10 3 269 2.0E-22 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase SII_RS01725 c031bff8896b01da33fe4f1adf5c4304 271 PANTHER PTHR15822 3 270 7.1E-18 T 22-04-2016 SII_RS03130 c5b60f53f2cd8086ca7cf62e2beafd5a 280 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 58 100 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 SII_RS03130 c5b60f53f2cd8086ca7cf62e2beafd5a 280 Gene3D G3DSA:1.10.10.60 7 57 3.8E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SII_RS03130 c5b60f53f2cd8086ca7cf62e2beafd5a 280 SMART SM00342 21 104 3.9E-18 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SII_RS03130 c5b60f53f2cd8086ca7cf62e2beafd5a 280 Gene3D G3DSA:1.10.10.60 58 106 5.1E-20 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SII_RS03130 c5b60f53f2cd8086ca7cf62e2beafd5a 280 PANTHER PTHR36444 52 280 3.4E-66 T 22-04-2016 SII_RS03130 c5b60f53f2cd8086ca7cf62e2beafd5a 280 SUPERFAMILY SSF46689 57 106 7.17E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SII_RS03130 c5b60f53f2cd8086ca7cf62e2beafd5a 280 Gene3D G3DSA:3.20.80.10 109 277 3.5E-33 T 22-04-2016 IPR011256 Regulatory factor, effector binding domain SII_RS03130 c5b60f53f2cd8086ca7cf62e2beafd5a 280 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 73 88 3.3E-6 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 SII_RS03130 c5b60f53f2cd8086ca7cf62e2beafd5a 280 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 88 104 3.3E-6 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 SII_RS03130 c5b60f53f2cd8086ca7cf62e2beafd5a 280 Pfam PF06445 GyrI-like small molecule binding domain 127 277 4.6E-20 T 22-04-2016 IPR029442 GyrI-like small molecule binding domain SII_RS03130 c5b60f53f2cd8086ca7cf62e2beafd5a 280 SUPERFAMILY SSF55136 127 279 1.18E-28 T 22-04-2016 IPR011256 Regulatory factor, effector binding domain SII_RS03130 c5b60f53f2cd8086ca7cf62e2beafd5a 280 PANTHER PTHR36444:SF2 52 280 3.4E-66 T 22-04-2016 SII_RS03130 c5b60f53f2cd8086ca7cf62e2beafd5a 280 Pfam PF12833 Helix-turn-helix domain 33 105 2.8E-16 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SII_RS03130 c5b60f53f2cd8086ca7cf62e2beafd5a 280 SMART SM00871 127 278 1.6E-26 T 22-04-2016 IPR010499 Bacterial transcription activator, effector binding SII_RS07795 8ac25e12087ee96d40ce36734066358c 418 SUPERFAMILY SSF49478 329 392 9.02E-5 T 22-04-2016 SII_RS07795 8ac25e12087ee96d40ce36734066358c 418 Pfam PF05738 Cna protein B-type domain 335 388 5.2E-9 T 22-04-2016 IPR008454 Collagen-binding surface protein Cna-like, B-type domain SII_RS07030 9a869c77d8cb233ae7c38cff1263516f 304 SUPERFAMILY SSF55681 6 283 3.98E-128 T 22-04-2016 SII_RS07030 9a869c77d8cb233ae7c38cff1263516f 304 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 5 285 57.112 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SII_RS07030 9a869c77d8cb233ae7c38cff1263516f 304 Gene3D G3DSA:3.30.930.10 2 207 1.7E-99 T 22-04-2016 SII_RS07030 9a869c77d8cb233ae7c38cff1263516f 304 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 6 291 1.8E-152 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SII_RS07030 9a869c77d8cb233ae7c38cff1263516f 304 Gene3D G3DSA:1.20.58.180 209 290 1.0E-36 T 22-04-2016 SII_RS07030 9a869c77d8cb233ae7c38cff1263516f 304 PANTHER PTHR30075 1 304 7.3E-240 T 22-04-2016 SII_RS07030 9a869c77d8cb233ae7c38cff1263516f 304 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 7 283 2.5E-144 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SII_RS07030 9a869c77d8cb233ae7c38cff1263516f 304 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 59 74 9.5E-65 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SII_RS07030 9a869c77d8cb233ae7c38cff1263516f 304 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 111 135 9.5E-65 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SII_RS07030 9a869c77d8cb233ae7c38cff1263516f 304 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 80 100 9.5E-65 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SII_RS07030 9a869c77d8cb233ae7c38cff1263516f 304 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 137 157 9.5E-65 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SII_RS07030 9a869c77d8cb233ae7c38cff1263516f 304 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 160 175 9.5E-65 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SII_RS07030 9a869c77d8cb233ae7c38cff1263516f 304 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 245 261 9.5E-65 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SII_RS09205 10d122f649c8271be6a97cbd6f43901c 432 PANTHER PTHR30349:SF20 79 410 1.5E-34 T 22-04-2016 SII_RS09205 10d122f649c8271be6a97cbd6f43901c 432 Pfam PF00589 Phage integrase family 223 401 2.0E-20 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 SII_RS09205 10d122f649c8271be6a97cbd6f43901c 432 Gene3D G3DSA:1.10.443.10 206 409 3.3E-35 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 SII_RS09205 10d122f649c8271be6a97cbd6f43901c 432 Gene3D G3DSA:1.10.150.130 80 194 3.4E-13 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal SII_RS09205 10d122f649c8271be6a97cbd6f43901c 432 Pfam PF14659 Phage integrase, N-terminal SAM-like domain 80 137 6.0E-10 T 22-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 SII_RS09205 10d122f649c8271be6a97cbd6f43901c 432 PANTHER PTHR30349 79 410 1.5E-34 T 22-04-2016 SII_RS09205 10d122f649c8271be6a97cbd6f43901c 432 SUPERFAMILY SSF56349 80 409 1.25E-52 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 SII_RS06200 b6fde4928c9500b7b42e20a4ad5c6a3b 228 SMART SM00448 2 112 1.3E-34 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SII_RS06200 b6fde4928c9500b7b42e20a4ad5c6a3b 228 Gene3D G3DSA:1.10.10.10 125 223 7.4E-29 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SII_RS06200 b6fde4928c9500b7b42e20a4ad5c6a3b 228 Pfam PF00072 Response regulator receiver domain 4 112 1.2E-24 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SII_RS06200 b6fde4928c9500b7b42e20a4ad5c6a3b 228 PANTHER PTHR26402 2 222 1.5E-122 T 22-04-2016 SII_RS06200 b6fde4928c9500b7b42e20a4ad5c6a3b 228 SMART SM00862 147 222 8.2E-22 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SII_RS06200 b6fde4928c9500b7b42e20a4ad5c6a3b 228 Gene3D G3DSA:3.40.50.2300 1 121 3.3E-35 T 22-04-2016 SII_RS06200 b6fde4928c9500b7b42e20a4ad5c6a3b 228 PANTHER PTHR26402:SF519 2 222 1.5E-122 T 22-04-2016 SII_RS06200 b6fde4928c9500b7b42e20a4ad5c6a3b 228 SUPERFAMILY SSF52172 1 182 9.51E-37 T 22-04-2016 IPR011006 CheY-like superfamily SII_RS06200 b6fde4928c9500b7b42e20a4ad5c6a3b 228 Pfam PF00486 Transcriptional regulatory protein, C terminal 147 222 1.8E-25 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SII_RS06250 cf98f1e0de54569a651ea69a39c4c047 275 Gene3D G3DSA:3.60.10.10 1 274 3.1E-75 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase SII_RS06250 cf98f1e0de54569a651ea69a39c4c047 275 SUPERFAMILY SSF56219 1 274 1.44E-56 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase SII_RS06250 cf98f1e0de54569a651ea69a39c4c047 275 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 5 252 2.3E-23 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase SII_RS06250 cf98f1e0de54569a651ea69a39c4c047 275 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 273 1.7E-82 T 22-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 SII_RS06250 cf98f1e0de54569a651ea69a39c4c047 275 PANTHER PTHR22748 1 275 9.1E-87 T 22-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 SII_RS06250 cf98f1e0de54569a651ea69a39c4c047 275 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 37 46 - T 22-04-2016 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 SII_RS06250 cf98f1e0de54569a651ea69a39c4c047 275 ProSitePatterns PS00728 AP endonucleases family 1 signature 3. 234 245 - T 22-04-2016 IPR020848 AP endonuclease 1, conserved site GO:0003677|GO:0004519|GO:0005622|GO:0006281 SII_RS06250 cf98f1e0de54569a651ea69a39c4c047 275 ProSitePatterns PS00727 AP endonucleases family 1 signature 2. 207 223 - T 22-04-2016 IPR020848 AP endonuclease 1, conserved site GO:0003677|GO:0004519|GO:0005622|GO:0006281 SII_RS06805 33b3739feb33881e6f00034a9951970b 458 ProSitePatterns PS00218 Amino acid permeases signature. 46 76 - T 22-04-2016 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 SII_RS06805 33b3739feb33881e6f00034a9951970b 458 PANTHER PTHR11785:SF29 7 458 5.4E-122 T 22-04-2016 SII_RS06805 33b3739feb33881e6f00034a9951970b 458 PANTHER PTHR11785 7 458 5.4E-122 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 SII_RS06805 33b3739feb33881e6f00034a9951970b 458 PIRSF PIRSF006060 1 458 6.5E-58 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 SII_RS06805 33b3739feb33881e6f00034a9951970b 458 Pfam PF00324 Amino acid permease 21 447 2.6E-83 T 22-04-2016 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 SII_RS01245 95848247bada495e59a2b047d05891de 448 Gene3D G3DSA:1.10.285.10 6 68 5.1E-27 T 22-04-2016 SII_RS01245 95848247bada495e59a2b047d05891de 448 Gene3D G3DSA:1.10.285.10 373 448 3.5E-25 T 22-04-2016 SII_RS01245 95848247bada495e59a2b047d05891de 448 Gene3D G3DSA:3.40.50.720 210 372 1.5E-59 T 22-04-2016 IPR016040 NAD(P)-binding domain SII_RS01245 95848247bada495e59a2b047d05891de 448 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 203 446 1.1E-87 T 22-04-2016 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 SII_RS01245 95848247bada495e59a2b047d05891de 448 Gene3D G3DSA:3.40.192.10 69 189 8.2E-62 T 22-04-2016 SII_RS01245 95848247bada495e59a2b047d05891de 448 SMART SM00839 205 446 4.4E-84 T 22-04-2016 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 SII_RS01245 95848247bada495e59a2b047d05891de 448 SUPERFAMILY SSF51735 203 447 2.59E-73 T 22-04-2016 IPR016040 NAD(P)-binding domain SII_RS01245 95848247bada495e59a2b047d05891de 448 PANTHER PTHR11606 1 448 1.6E-246 T 22-04-2016 SII_RS01245 95848247bada495e59a2b047d05891de 448 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 58 186 3.3E-50 T 22-04-2016 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 SII_RS01245 95848247bada495e59a2b047d05891de 448 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 123 136 - T 22-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 SII_RS01245 95848247bada495e59a2b047d05891de 448 PANTHER PTHR11606:SF4 1 448 1.6E-246 T 22-04-2016 SII_RS01245 95848247bada495e59a2b047d05891de 448 SUPERFAMILY SSF53223 7 197 2.43E-72 T 22-04-2016 SII_RS01245 95848247bada495e59a2b047d05891de 448 PIRSF PIRSF000185 23 448 1.7E-123 T 22-04-2016 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 SII_RS01245 95848247bada495e59a2b047d05891de 448 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 236 256 2.4E-31 T 22-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 SII_RS01245 95848247bada495e59a2b047d05891de 448 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 194 216 2.4E-31 T 22-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 SII_RS01245 95848247bada495e59a2b047d05891de 448 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 372 383 2.4E-31 T 22-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 SII_RS01245 95848247bada495e59a2b047d05891de 448 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 115 129 2.4E-31 T 22-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 SII_RS01270 9a8c178a516b18704a10a14659f9c6e2 392 SUPERFAMILY SSF53067 80 350 2.14E-34 T 22-04-2016 SII_RS01270 9a8c178a516b18704a10a14659f9c6e2 392 PANTHER PTHR18964 58 334 6.4E-34 T 22-04-2016 SII_RS01270 9a8c178a516b18704a10a14659f9c6e2 392 Gene3D G3DSA:3.30.420.40 77 213 1.5E-19 T 22-04-2016 SII_RS01270 9a8c178a516b18704a10a14659f9c6e2 392 Gene3D G3DSA:3.30.420.40 214 354 2.0E-31 T 22-04-2016 SII_RS01270 9a8c178a516b18704a10a14659f9c6e2 392 PANTHER PTHR18964:SF123 58 334 6.4E-34 T 22-04-2016 SII_RS01270 9a8c178a516b18704a10a14659f9c6e2 392 SUPERFAMILY SSF46785 11 62 1.07E-12 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SII_RS01270 9a8c178a516b18704a10a14659f9c6e2 392 Pfam PF00480 ROK family 83 361 6.9E-36 T 22-04-2016 IPR000600 ROK family SII_RS01270 9a8c178a516b18704a10a14659f9c6e2 392 Gene3D G3DSA:1.10.10.10 11 74 8.3E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SII_RS00615 1ce19b26eea00fc5bde7e037922ed673 151 PANTHER PTHR34134:SF1 6 130 2.1E-19 T 22-04-2016 SII_RS00615 1ce19b26eea00fc5bde7e037922ed673 151 PIRSF PIRSF019455 1 131 3.5E-43 T 22-04-2016 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 SII_RS00615 1ce19b26eea00fc5bde7e037922ed673 151 Pfam PF03965 Penicillinase repressor 6 119 2.5E-28 T 22-04-2016 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 SII_RS00615 1ce19b26eea00fc5bde7e037922ed673 151 TIGRFAM TIGR02698 CopY_TcrY: copper transport repressor, CopY/TcrY family 5 133 4.3E-37 T 22-04-2016 IPR014071 Copper transport repressor CopY/TcrY SII_RS00615 1ce19b26eea00fc5bde7e037922ed673 151 SUPERFAMILY SSF46785 5 120 5.81E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SII_RS00615 1ce19b26eea00fc5bde7e037922ed673 151 Gene3D G3DSA:1.10.10.10 7 70 1.6E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SII_RS00615 1ce19b26eea00fc5bde7e037922ed673 151 PANTHER PTHR34134 6 130 2.1E-19 T 22-04-2016 SII_RS05520 d792ad22eb70f19f865f41b69ce4d2e7 306 PANTHER PTHR30193 6 306 9.1E-104 T 22-04-2016 SII_RS05520 d792ad22eb70f19f865f41b69ce4d2e7 306 SUPERFAMILY SSF161098 62 290 3.01E-41 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SII_RS05520 d792ad22eb70f19f865f41b69ce4d2e7 306 Gene3D G3DSA:1.10.3720.10 9 292 5.9E-42 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SII_RS05520 d792ad22eb70f19f865f41b69ce4d2e7 306 PANTHER PTHR30193:SF19 6 306 9.1E-104 T 22-04-2016 SII_RS05520 d792ad22eb70f19f865f41b69ce4d2e7 306 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 93 299 4.0E-14 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SII_RS05095 e50db17f092f8ad0ee2e3bf4467e1e95 68 Gene3D G3DSA:1.10.260.40 8 67 5.4E-11 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SII_RS05095 e50db17f092f8ad0ee2e3bf4467e1e95 68 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 8 63 3.4E-15 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SII_RS05095 e50db17f092f8ad0ee2e3bf4467e1e95 68 SUPERFAMILY SSF47413 7 66 2.06E-9 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SII_RS06865 bcb93c8581b21cb474174b8317175cb4 249 Hamap MF_01124 Adapter protein MecA [mecA]. 1 249 23.607 T 22-04-2016 IPR008681 Negative regulator of genetic competence, MecA SII_RS06865 bcb93c8581b21cb474174b8317175cb4 249 PIRSF PIRSF029008 1 249 5.4E-65 T 22-04-2016 IPR008681 Negative regulator of genetic competence, MecA SII_RS06865 bcb93c8581b21cb474174b8317175cb4 249 PANTHER PTHR39161:SF1 2 247 1.0E-78 T 22-04-2016 SII_RS06865 bcb93c8581b21cb474174b8317175cb4 249 Pfam PF05389 Negative regulator of genetic competence (MecA) 1 245 4.4E-43 T 22-04-2016 IPR008681 Negative regulator of genetic competence, MecA SII_RS06865 bcb93c8581b21cb474174b8317175cb4 249 PANTHER PTHR39161 2 247 1.0E-78 T 22-04-2016 SII_RS07770 7619d3290d92cd3c0220d720f0ab35bb 209 PANTHER PTHR30246:SF4 1 205 2.7E-90 T 22-04-2016 SII_RS07770 7619d3290d92cd3c0220d720f0ab35bb 209 PANTHER PTHR30246 1 205 2.7E-90 T 22-04-2016 SII_RS07770 7619d3290d92cd3c0220d720f0ab35bb 209 Gene3D G3DSA:3.20.20.70 1 207 9.9E-69 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SII_RS07770 7619d3290d92cd3c0220d720f0ab35bb 209 Pfam PF01081 KDPG and KHG aldolase 9 200 3.5E-37 T 22-04-2016 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 SII_RS07770 7619d3290d92cd3c0220d720f0ab35bb 209 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 10 206 3.3E-48 T 22-04-2016 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 SII_RS07770 7619d3290d92cd3c0220d720f0ab35bb 209 SUPERFAMILY SSF51569 4 207 3.48E-57 T 22-04-2016 SII_RS02360 487b84c55dfaa22b2cc549f7408fc3db 477 Pfam PF08323 Starch synthase catalytic domain 2 236 5.9E-83 T 22-04-2016 IPR013534 Starch synthase, catalytic domain KEGG: 00500+2.4.1.21|MetaCyc: PWY-622|UniPathway: UPA00164 SII_RS02360 487b84c55dfaa22b2cc549f7408fc3db 477 Pfam PF00534 Glycosyl transferases group 1 286 421 7.3E-14 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 SII_RS02360 487b84c55dfaa22b2cc549f7408fc3db 477 PANTHER PTHR12526:SF17 1 475 1.4E-151 T 22-04-2016 SII_RS02360 487b84c55dfaa22b2cc549f7408fc3db 477 Hamap MF_00484 Glycogen synthase [glgA]. 1 475 45.56 T 22-04-2016 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622|UniPathway: UPA00164 SII_RS02360 487b84c55dfaa22b2cc549f7408fc3db 477 PANTHER PTHR12526 1 475 1.4E-151 T 22-04-2016 SII_RS02360 487b84c55dfaa22b2cc549f7408fc3db 477 Gene3D G3DSA:3.40.50.2000 250 457 7.7E-74 T 22-04-2016 SII_RS02360 487b84c55dfaa22b2cc549f7408fc3db 477 SUPERFAMILY SSF53756 2 477 2.32E-127 T 22-04-2016 SII_RS02360 487b84c55dfaa22b2cc549f7408fc3db 477 TIGRFAM TIGR02095 glgA: glycogen/starch synthase, ADP-glucose type 1 475 1.4E-180 T 22-04-2016 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622|UniPathway: UPA00164 SII_RS00665 d21f009a1aa1ec2d44a0658df1b06235 347 Gene3D G3DSA:3.30.479.20 57 147 3.4E-16 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 SII_RS00665 d21f009a1aa1ec2d44a0658df1b06235 347 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 340 2.2E-96 T 22-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 SII_RS00665 d21f009a1aa1ec2d44a0658df1b06235 347 Gene3D G3DSA:1.10.286.20 241 277 7.0E-6 T 22-04-2016 SII_RS00665 d21f009a1aa1ec2d44a0658df1b06235 347 Hamap MF_00050 Elongation factor Ts [tsf]. 1 341 66.386 T 22-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 SII_RS00665 d21f009a1aa1ec2d44a0658df1b06235 347 SUPERFAMILY SSF54713 56 146 5.07E-22 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 SII_RS00665 d21f009a1aa1ec2d44a0658df1b06235 347 SUPERFAMILY SSF46934 3 56 4.13E-18 T 22-04-2016 IPR009060 UBA-like GO:0005515 SII_RS00665 d21f009a1aa1ec2d44a0658df1b06235 347 PANTHER PTHR11741 1 209 2.3E-118 T 22-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 SII_RS00665 d21f009a1aa1ec2d44a0658df1b06235 347 PANTHER PTHR11741 252 343 2.3E-118 T 22-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 SII_RS00665 d21f009a1aa1ec2d44a0658df1b06235 347 ProSitePatterns PS01126 Elongation factor Ts signature 1. 12 27 - T 22-04-2016 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 SII_RS00665 d21f009a1aa1ec2d44a0658df1b06235 347 Gene3D G3DSA:3.30.479.20 286 322 3.3E-28 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 SII_RS00665 d21f009a1aa1ec2d44a0658df1b06235 347 Gene3D G3DSA:3.30.479.20 152 189 3.3E-28 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 SII_RS00665 d21f009a1aa1ec2d44a0658df1b06235 347 Gene3D G3DSA:1.10.8.10 2 55 1.6E-25 T 22-04-2016 SII_RS00665 d21f009a1aa1ec2d44a0658df1b06235 347 ProSitePatterns PS01127 Elongation factor Ts signature 2. 75 85 - T 22-04-2016 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 SII_RS00665 d21f009a1aa1ec2d44a0658df1b06235 347 Pfam PF00889 Elongation factor TS 71 322 6.3E-67 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 SII_RS00665 d21f009a1aa1ec2d44a0658df1b06235 347 SUPERFAMILY SSF54713 249 340 6.67E-38 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 SII_RS00665 d21f009a1aa1ec2d44a0658df1b06235 347 SUPERFAMILY SSF54713 152 206 6.67E-38 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 SII_RS08240 a39288fab1b582db2be37a311c1d3479 95 Pfam PF15513 Domain of unknown function (DUF4651) 35 94 4.3E-25 T 22-04-2016 IPR028105 Protein of unknown function DUF4651 SII_RS01360 68218b6bbf783d9c440ea58188cf3567 225 PANTHER PTHR26402 2 225 7.0E-66 T 22-04-2016 SII_RS01360 68218b6bbf783d9c440ea58188cf3567 225 Pfam PF00486 Transcriptional regulatory protein, C terminal 147 220 2.3E-19 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SII_RS01360 68218b6bbf783d9c440ea58188cf3567 225 SMART SM00448 2 111 6.8E-32 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SII_RS01360 68218b6bbf783d9c440ea58188cf3567 225 Pfam PF00072 Response regulator receiver domain 4 111 4.0E-24 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SII_RS01360 68218b6bbf783d9c440ea58188cf3567 225 Gene3D G3DSA:1.10.10.10 125 224 3.9E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SII_RS01360 68218b6bbf783d9c440ea58188cf3567 225 Gene3D G3DSA:3.40.50.2300 2 120 7.9E-34 T 22-04-2016 SII_RS01360 68218b6bbf783d9c440ea58188cf3567 225 PANTHER PTHR26402:SF578 2 225 7.0E-66 T 22-04-2016 SII_RS01360 68218b6bbf783d9c440ea58188cf3567 225 SMART SM00862 146 222 1.3E-21 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SII_RS01360 68218b6bbf783d9c440ea58188cf3567 225 SUPERFAMILY SSF52172 1 180 5.12E-35 T 22-04-2016 IPR011006 CheY-like superfamily SII_RS07610 dfe18bae01c44e0f0f14e1cb6c5ff975 229 Gene3D G3DSA:3.50.40.10 73 198 1.1E-17 T 22-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 SII_RS07610 dfe18bae01c44e0f0f14e1cb6c5ff975 229 PANTHER PTHR39209 1 223 7.8E-25 T 22-04-2016 SII_RS07610 dfe18bae01c44e0f0f14e1cb6c5ff975 229 SUPERFAMILY SSF56037 58 214 8.37E-23 T 22-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 SII_RS07610 dfe18bae01c44e0f0f14e1cb6c5ff975 229 SMART SM00873 63 214 3.2E-6 T 22-04-2016 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 SII_RS07610 dfe18bae01c44e0f0f14e1cb6c5ff975 229 Pfam PF03483 B3/4 domain 68 206 1.2E-21 T 22-04-2016 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 SII_RS07555 09cf65d9b0b7dec80a9b46c43d7f450b 299 PANTHER PTHR18964 1 296 6.4E-81 T 22-04-2016 SII_RS07555 09cf65d9b0b7dec80a9b46c43d7f450b 299 Gene3D G3DSA:3.30.420.40 1 106 7.3E-36 T 22-04-2016 SII_RS07555 09cf65d9b0b7dec80a9b46c43d7f450b 299 SUPERFAMILY SSF53067 5 293 4.21E-37 T 22-04-2016 SII_RS07555 09cf65d9b0b7dec80a9b46c43d7f450b 299 PANTHER PTHR18964:SF10 1 296 6.4E-81 T 22-04-2016 SII_RS07555 09cf65d9b0b7dec80a9b46c43d7f450b 299 Pfam PF00480 ROK family 5 292 1.0E-73 T 22-04-2016 IPR000600 ROK family SII_RS07555 09cf65d9b0b7dec80a9b46c43d7f450b 299 Gene3D G3DSA:3.30.420.40 107 295 5.7E-62 T 22-04-2016 SII_RS07555 09cf65d9b0b7dec80a9b46c43d7f450b 299 ProSitePatterns PS01125 ROK family signature. 134 159 - T 22-04-2016 IPR000600 ROK family SII_RS03675 fbc034fb68023c035d6b39806be9e7db 134 ProSitePatterns PS01069 Prokaryotic diacylglycerol kinase signature. 77 88 - T 22-04-2016 IPR000829 Diacylglycerol kinase, prokaryotic GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039 SII_RS03675 fbc034fb68023c035d6b39806be9e7db 134 PANTHER PTHR34299:SF1 4 134 1.1E-34 T 22-04-2016 SII_RS03675 fbc034fb68023c035d6b39806be9e7db 134 Gene3D G3DSA:1.10.3830.10 10 130 2.2E-42 T 22-04-2016 SII_RS03675 fbc034fb68023c035d6b39806be9e7db 134 PANTHER PTHR34299 4 134 1.1E-34 T 22-04-2016 SII_RS03675 fbc034fb68023c035d6b39806be9e7db 134 Pfam PF01219 Prokaryotic diacylglycerol kinase 24 125 2.4E-33 T 22-04-2016 IPR000829 Diacylglycerol kinase, prokaryotic GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039 SII_RS08020 6376600c6d9f534ce8857240bf78b003 590 Pfam PF08757 CotH protein 135 465 3.3E-80 T 22-04-2016 IPR014867 Spore coat protein CotH SII_RS08020 6376600c6d9f534ce8857240bf78b003 590 Gene3D G3DSA:2.60.40.10 483 556 5.6E-6 T 22-04-2016 IPR013783 Immunoglobulin-like fold SII_RS08020 6376600c6d9f534ce8857240bf78b003 590 SUPERFAMILY SSF49265 483 555 3.98E-7 T 22-04-2016 IPR003961 Fibronectin type III GO:0005515 SII_RS06385 ea8eaca96bbc585421f6abcb0650b0ce 311 PANTHER PTHR12112:SF17 4 311 8.2E-120 T 22-04-2016 SII_RS06385 ea8eaca96bbc585421f6abcb0650b0ce 311 Hamap MF_00207 Probable manganese-dependent inorganic pyrophosphatase [ppaC]. 3 311 45.932 T 22-04-2016 IPR022934 Manganese-dependent inorganic pyrophosphatase, probable GO:0004427 KEGG: 00190+3.6.1.1 SII_RS06385 ea8eaca96bbc585421f6abcb0650b0ce 311 PANTHER PTHR12112 4 311 8.2E-120 T 22-04-2016 SII_RS06385 ea8eaca96bbc585421f6abcb0650b0ce 311 Pfam PF01368 DHH family 3 147 7.4E-23 T 22-04-2016 IPR001667 DDH domain SII_RS06385 ea8eaca96bbc585421f6abcb0650b0ce 311 SMART SM01131 183 309 9.7E-59 T 22-04-2016 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1 SII_RS06385 ea8eaca96bbc585421f6abcb0650b0ce 311 Gene3D G3DSA:3.90.1640.10 2 189 4.1E-59 T 22-04-2016 SII_RS06385 ea8eaca96bbc585421f6abcb0650b0ce 311 Pfam PF02833 DHHA2 domain 185 307 6.1E-18 T 22-04-2016 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1 SII_RS06385 ea8eaca96bbc585421f6abcb0650b0ce 311 SUPERFAMILY SSF64182 3 311 8.63E-84 T 22-04-2016 SII_RS06620 967ecd21d32bf371340df98698091965 239 SUPERFAMILY SSF55144 27 232 1.66E-17 T 22-04-2016 IPR009097 RNA ligase/cyclic nucleotide phosphodiesterase SII_RS06620 967ecd21d32bf371340df98698091965 239 Gene3D G3DSA:3.90.1140.10 22 234 7.6E-10 T 22-04-2016 IPR009097 RNA ligase/cyclic nucleotide phosphodiesterase SII_RS07550 e692c25d06acfdd25139d791a51e65db 136 PRINTS PR01576 Peptide deformylase signature 94 112 6.3E-10 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 SII_RS07550 e692c25d06acfdd25139d791a51e65db 136 PRINTS PR01576 Peptide deformylase signature 113 136 6.3E-10 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 SII_RS07550 e692c25d06acfdd25139d791a51e65db 136 PRINTS PR01576 Peptide deformylase signature 30 59 6.3E-10 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 SII_RS07550 e692c25d06acfdd25139d791a51e65db 136 Gene3D G3DSA:3.90.45.10 2 136 1.7E-31 T 22-04-2016 IPR023635 Peptide deformylase SII_RS07550 e692c25d06acfdd25139d791a51e65db 136 PANTHER PTHR10458 25 136 2.4E-19 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 SII_RS07550 e692c25d06acfdd25139d791a51e65db 136 PIRSF PIRSF004749 1 136 5.1E-28 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 SII_RS07550 e692c25d06acfdd25139d791a51e65db 136 SUPERFAMILY SSF56420 5 136 3.4E-32 T 22-04-2016 IPR023635 Peptide deformylase SII_RS07550 e692c25d06acfdd25139d791a51e65db 136 Pfam PF01327 Polypeptide deformylase 12 136 3.0E-23 T 22-04-2016 IPR023635 Peptide deformylase SII_RS04735 b61cda4c4cfa3703a2527ad3007e3620 404 SUPERFAMILY SSF52402 174 387 9.92E-52 T 22-04-2016 SII_RS04735 b61cda4c4cfa3703a2527ad3007e3620 404 Gene3D G3DSA:3.30.565.10 85 158 3.6E-4 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SII_RS04735 b61cda4c4cfa3703a2527ad3007e3620 404 PANTHER PTHR14911 1 400 2.4E-179 T 22-04-2016 SII_RS04735 b61cda4c4cfa3703a2527ad3007e3620 404 Hamap MF_00021 tRNA sulfurtransferase [thiI]. 1 404 167.315 T 22-04-2016 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 UniPathway: UPA00060 SII_RS04735 b61cda4c4cfa3703a2527ad3007e3620 404 SMART SM00981 74 165 7.4E-22 T 22-04-2016 IPR004114 THUMP domain GO:0003723 SII_RS04735 b61cda4c4cfa3703a2527ad3007e3620 404 PANTHER PTHR14911:SF16 1 400 2.4E-179 T 22-04-2016 SII_RS04735 b61cda4c4cfa3703a2527ad3007e3620 404 TIGRFAM TIGR00342 TIGR00342: tRNA sulfurtransferase ThiI 6 372 2.1E-118 T 22-04-2016 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 UniPathway: UPA00060 SII_RS04735 b61cda4c4cfa3703a2527ad3007e3620 404 Pfam PF02568 Thiamine biosynthesis protein (ThiI) 175 370 1.5E-62 T 22-04-2016 IPR020536 Thil, AANH domain GO:0004810 UniPathway: UPA00060 SII_RS04735 b61cda4c4cfa3703a2527ad3007e3620 404 SUPERFAMILY SSF143437 3 173 1.74E-51 T 22-04-2016 SII_RS04735 b61cda4c4cfa3703a2527ad3007e3620 404 Gene3D G3DSA:3.40.50.620 173 333 1.9E-51 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SII_RS04735 b61cda4c4cfa3703a2527ad3007e3620 404 Pfam PF02926 THUMP domain 45 163 7.9E-19 T 22-04-2016 IPR004114 THUMP domain GO:0003723 SII_RS06670 3bdee13e247c9704d99212980860baa3 130 Gene3D G3DSA:2.40.50.140 2 79 4.7E-21 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SII_RS06670 3bdee13e247c9704d99212980860baa3 130 Pfam PF00575 S1 RNA binding domain 3 73 1.2E-13 T 22-04-2016 IPR003029 S1 domain GO:0003676 SII_RS06670 3bdee13e247c9704d99212980860baa3 130 SUPERFAMILY SSF50249 1 81 9.7E-20 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SII_RS06670 3bdee13e247c9704d99212980860baa3 130 SMART SM00316 2 73 1.6E-21 T 22-04-2016 IPR022967 RNA-binding domain, S1 SII_RS06670 3bdee13e247c9704d99212980860baa3 130 PANTHER PTHR10724 1 111 2.9E-27 T 22-04-2016 SII_RS06670 3bdee13e247c9704d99212980860baa3 130 PANTHER PTHR10724:SF1 1 111 2.9E-27 T 22-04-2016 SII_RS08115 8f1335b86c35529a55063fadd46c2393 147 Gene3D G3DSA:3.50.80.10 1 144 8.3E-59 T 22-04-2016 IPR023509 D-Tyr tRNAtyr deacylase-like domain SII_RS08115 8f1335b86c35529a55063fadd46c2393 147 PANTHER PTHR10472 2 147 3.4E-76 T 22-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 SII_RS08115 8f1335b86c35529a55063fadd46c2393 147 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 2 143 1.1E-54 T 22-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 SII_RS08115 8f1335b86c35529a55063fadd46c2393 147 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 1 144 6.3E-60 T 22-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 SII_RS08115 8f1335b86c35529a55063fadd46c2393 147 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 1 144 34.17 T 22-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 SII_RS08115 8f1335b86c35529a55063fadd46c2393 147 SUPERFAMILY SSF69500 1 144 6.41E-58 T 22-04-2016 IPR023509 D-Tyr tRNAtyr deacylase-like domain SII_RS01365 080e1989f18e7c0351f148e1d2b8be82 288 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 187 278 7.6E-8 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SII_RS01365 080e1989f18e7c0351f148e1d2b8be82 288 SMART SM00387 186 288 6.1E-8 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SII_RS01365 080e1989f18e7c0351f148e1d2b8be82 288 SMART SM00388 79 141 9.0E-5 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SII_RS01365 080e1989f18e7c0351f148e1d2b8be82 288 SUPERFAMILY SSF55874 148 277 4.24E-19 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SII_RS01365 080e1989f18e7c0351f148e1d2b8be82 288 SUPERFAMILY SSF47384 64 134 1.12E-8 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SII_RS01365 080e1989f18e7c0351f148e1d2b8be82 288 Gene3D G3DSA:1.10.287.130 76 135 1.3E-8 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SII_RS01365 080e1989f18e7c0351f148e1d2b8be82 288 PANTHER PTHR24423 22 278 3.0E-25 T 22-04-2016 SII_RS01365 080e1989f18e7c0351f148e1d2b8be82 288 Gene3D G3DSA:3.30.565.10 148 278 6.7E-20 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SII_RS01365 080e1989f18e7c0351f148e1d2b8be82 288 Pfam PF00512 His Kinase A (phospho-acceptor) domain 84 121 7.9E-7 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SII_RS06230 3297499b8cbe6c42956d664c02e65d24 211 Pfam PF13630 SdpI/YhfL protein family 135 203 1.5E-22 T 22-04-2016 IPR025962 SdpI/YhfL protein family SII_RS06230 3297499b8cbe6c42956d664c02e65d24 211 PIRSF PIRSF038959 1 210 1.3E-37 T 22-04-2016 IPR026272 Immunity protein SdpI SII_RS06230 3297499b8cbe6c42956d664c02e65d24 211 Pfam PF07853 Protein of unknown function (DUF1648) 13 60 1.8E-16 T 22-04-2016 IPR012867 Domain of unknown function DUF1648 SII_RS06230 3297499b8cbe6c42956d664c02e65d24 211 PANTHER PTHR37810 1 211 4.5E-19 T 22-04-2016 SII_RS06230 3297499b8cbe6c42956d664c02e65d24 211 PANTHER PTHR37810:SF1 1 211 4.5E-19 T 22-04-2016 SII_RS08815 d4dd213ea6cb0728e191e83adb632db4 164 Pfam PF13671 AAA domain 4 63 2.1E-6 T 22-04-2016 SII_RS08815 d4dd213ea6cb0728e191e83adb632db4 164 PANTHER PTHR10156 3 121 5.6E-32 T 22-04-2016 IPR008431 Cyclic nucleotide phosphodiesterase GO:0004113|GO:0009214|GO:0016020 SII_RS08815 d4dd213ea6cb0728e191e83adb632db4 164 PANTHER PTHR10156:SF1 3 121 5.6E-32 T 22-04-2016 SII_RS08815 d4dd213ea6cb0728e191e83adb632db4 164 SUPERFAMILY SSF52540 1 141 8.53E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS08815 d4dd213ea6cb0728e191e83adb632db4 164 Gene3D G3DSA:3.40.50.300 4 156 4.8E-15 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS02430 3a4d12966c563b56e59d64b2bd11c30f 589 Gene3D G3DSA:1.20.1560.10 8 332 2.9E-79 T 22-04-2016 SII_RS02430 3a4d12966c563b56e59d64b2bd11c30f 589 PANTHER PTHR24221:SF271 2 589 9.1E-279 T 22-04-2016 SII_RS02430 3a4d12966c563b56e59d64b2bd11c30f 589 PANTHER PTHR24221 2 589 9.1E-279 T 22-04-2016 SII_RS02430 3a4d12966c563b56e59d64b2bd11c30f 589 Pfam PF00664 ABC transporter transmembrane region 20 302 9.3E-51 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SII_RS02430 3a4d12966c563b56e59d64b2bd11c30f 589 SUPERFAMILY SSF90123 8 332 1.09E-78 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SII_RS02430 3a4d12966c563b56e59d64b2bd11c30f 589 Gene3D G3DSA:3.40.50.300 348 578 1.5E-78 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS02430 3a4d12966c563b56e59d64b2bd11c30f 589 Pfam PF00005 ABC transporter 365 513 1.3E-33 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SII_RS02430 3a4d12966c563b56e59d64b2bd11c30f 589 ProSitePatterns PS00211 ABC transporters family signature. 485 499 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SII_RS02430 3a4d12966c563b56e59d64b2bd11c30f 589 SMART SM00382 373 545 2.3E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain SII_RS02430 3a4d12966c563b56e59d64b2bd11c30f 589 SUPERFAMILY SSF52540 342 584 1.02E-88 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS03730 40fb846c8568f28ca03cda67bd2fc1aa 234 PANTHER PTHR21180 86 234 1.2E-35 T 22-04-2016 SII_RS03730 40fb846c8568f28ca03cda67bd2fc1aa 234 SUPERFAMILY SSF47781 157 233 6.67E-27 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 SII_RS03730 40fb846c8568f28ca03cda67bd2fc1aa 234 Gene3D G3DSA:1.10.150.320 164 233 3.3E-21 T 22-04-2016 SII_RS03730 40fb846c8568f28ca03cda67bd2fc1aa 234 Pfam PF12836 Helix-hairpin-helix motif 169 232 9.6E-22 T 22-04-2016 SII_RS03730 40fb846c8568f28ca03cda67bd2fc1aa 234 Gene3D G3DSA:3.10.560.10 85 161 2.4E-11 T 22-04-2016 SII_RS03730 40fb846c8568f28ca03cda67bd2fc1aa 234 SMART SM00278 211 230 0.47 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 SII_RS03730 40fb846c8568f28ca03cda67bd2fc1aa 234 SMART SM00278 181 200 0.03 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 SII_RS03730 40fb846c8568f28ca03cda67bd2fc1aa 234 Pfam PF10531 SLBB domain 87 140 2.2E-15 T 22-04-2016 IPR019554 Soluble ligand binding domain SII_RS03730 40fb846c8568f28ca03cda67bd2fc1aa 234 TIGRFAM TIGR00426 TIGR00426: competence protein ComEA helix-hairpin-helix repeat region 168 233 8.9E-21 T 22-04-2016 IPR004509 Competence protein ComEA, helix-hairpin-helix domain SII_RS08905 9ac80135413c3a71756b48ec1b1e1302 230 TIGRFAM TIGR01007 eps_fam: capsular exopolysaccharide family 19 222 7.9E-96 T 22-04-2016 IPR005702 Exopolysaccharide synthesis protein GO:0045226 SII_RS08905 9ac80135413c3a71756b48ec1b1e1302 230 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 38 211 1.1E-20 T 22-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain SII_RS08905 9ac80135413c3a71756b48ec1b1e1302 230 PANTHER PTHR32309 12 230 9.4E-58 T 22-04-2016 SII_RS08905 9ac80135413c3a71756b48ec1b1e1302 230 PANTHER PTHR32309:SF13 12 230 9.4E-58 T 22-04-2016 SII_RS08905 9ac80135413c3a71756b48ec1b1e1302 230 Gene3D G3DSA:3.40.50.300 36 213 1.8E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS08905 9ac80135413c3a71756b48ec1b1e1302 230 SUPERFAMILY SSF52540 36 215 8.88E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS02870 2eaecf45bcb30df046e758d738912edd 454 PANTHER PTHR23501 10 453 2.6E-78 T 22-04-2016 SII_RS02870 2eaecf45bcb30df046e758d738912edd 454 Pfam PF07690 Major Facilitator Superfamily 20 406 1.8E-42 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SII_RS02870 2eaecf45bcb30df046e758d738912edd 454 SUPERFAMILY SSF103473 6 198 3.01E-54 T 22-04-2016 IPR020846 Major facilitator superfamily domain SII_RS02870 2eaecf45bcb30df046e758d738912edd 454 SUPERFAMILY SSF103473 245 452 3.01E-54 T 22-04-2016 IPR020846 Major facilitator superfamily domain SII_RS02870 2eaecf45bcb30df046e758d738912edd 454 Gene3D G3DSA:1.20.1250.20 260 448 5.1E-16 T 22-04-2016 SII_RS02870 2eaecf45bcb30df046e758d738912edd 454 Gene3D G3DSA:1.20.1250.20 16 199 4.0E-25 T 22-04-2016 SII_RS02870 2eaecf45bcb30df046e758d738912edd 454 PRINTS PR01036 Tetracycline resistance protein TetB signature 299 323 2.0E-8 T 22-04-2016 SII_RS02870 2eaecf45bcb30df046e758d738912edd 454 PRINTS PR01036 Tetracycline resistance protein TetB signature 204 222 2.0E-8 T 22-04-2016 SII_RS02870 2eaecf45bcb30df046e758d738912edd 454 PRINTS PR01036 Tetracycline resistance protein TetB signature 18 42 2.0E-8 T 22-04-2016 SII_RS02870 2eaecf45bcb30df046e758d738912edd 454 PRINTS PR01036 Tetracycline resistance protein TetB signature 109 129 2.0E-8 T 22-04-2016 SII_RS02870 2eaecf45bcb30df046e758d738912edd 454 PRINTS PR01036 Tetracycline resistance protein TetB signature 139 163 2.0E-8 T 22-04-2016 SII_RS06110 dc89d44fa528fa5786e1e14278b66431 232 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 117 125 1.7E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SII_RS06110 dc89d44fa528fa5786e1e14278b66431 232 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 137 156 1.7E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SII_RS06110 dc89d44fa528fa5786e1e14278b66431 232 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 63 74 1.7E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SII_RS06110 dc89d44fa528fa5786e1e14278b66431 232 SUPERFAMILY SSF51735 3 231 9.67E-60 T 22-04-2016 IPR016040 NAD(P)-binding domain SII_RS06110 dc89d44fa528fa5786e1e14278b66431 232 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 8.5E-36 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SII_RS06110 dc89d44fa528fa5786e1e14278b66431 232 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 111 127 8.5E-36 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SII_RS06110 dc89d44fa528fa5786e1e14278b66431 232 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 63 74 8.5E-36 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SII_RS06110 dc89d44fa528fa5786e1e14278b66431 232 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 193 213 8.5E-36 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SII_RS06110 dc89d44fa528fa5786e1e14278b66431 232 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 137 156 8.5E-36 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SII_RS06110 dc89d44fa528fa5786e1e14278b66431 232 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 175 8.5E-36 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SII_RS06110 dc89d44fa528fa5786e1e14278b66431 232 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 9 230 9.4E-43 T 22-04-2016 SII_RS06110 dc89d44fa528fa5786e1e14278b66431 232 PANTHER PTHR24322 137 168 6.3E-34 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SII_RS06110 dc89d44fa528fa5786e1e14278b66431 232 PANTHER PTHR24322 7 121 6.3E-34 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SII_RS06110 dc89d44fa528fa5786e1e14278b66431 232 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 124 152 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 SII_RS06110 dc89d44fa528fa5786e1e14278b66431 232 Gene3D G3DSA:3.40.50.720 2 231 8.6E-61 T 22-04-2016 IPR016040 NAD(P)-binding domain SII_RS02065 d6591ef78c0e7fa708131ea06968aecd 91 SUPERFAMILY SSF47729 3 91 7.07E-33 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 SII_RS02065 d6591ef78c0e7fa708131ea06968aecd 91 SMART SM00411 2 91 2.6E-46 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 SII_RS02065 d6591ef78c0e7fa708131ea06968aecd 91 PANTHER PTHR33175 1 91 1.9E-44 T 22-04-2016 SII_RS02065 d6591ef78c0e7fa708131ea06968aecd 91 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 47 66 - T 22-04-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 SII_RS02065 d6591ef78c0e7fa708131ea06968aecd 91 PRINTS PR01727 Prokaryotic integration host factor signature 75 89 2.3E-21 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 SII_RS02065 d6591ef78c0e7fa708131ea06968aecd 91 PRINTS PR01727 Prokaryotic integration host factor signature 59 72 2.3E-21 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 SII_RS02065 d6591ef78c0e7fa708131ea06968aecd 91 PRINTS PR01727 Prokaryotic integration host factor signature 41 56 2.3E-21 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 SII_RS02065 d6591ef78c0e7fa708131ea06968aecd 91 Gene3D G3DSA:4.10.520.10 3 91 7.0E-38 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 SII_RS02065 d6591ef78c0e7fa708131ea06968aecd 91 Pfam PF00216 Bacterial DNA-binding protein 3 91 4.4E-34 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 SII_RS07070 55726abc0b95f200c727f5fdda4e6c7d 543 PANTHER PTHR10010:SF26 1 455 4.9E-125 T 22-04-2016 SII_RS07070 55726abc0b95f200c727f5fdda4e6c7d 543 TIGRFAM TIGR00704 NaPi_cotrn_rel: Na/Pi-cotransporter II-related protein 8 315 1.1E-70 T 22-04-2016 IPR004633 Na/Pi-cotransporter II-related/YqeW-like protein GO:0016020 SII_RS07070 55726abc0b95f200c727f5fdda4e6c7d 543 SUPERFAMILY SSF109755 337 538 6.8E-43 T 22-04-2016 SII_RS07070 55726abc0b95f200c727f5fdda4e6c7d 543 Gene3D G3DSA:1.20.58.220 334 440 2.1E-15 T 22-04-2016 SII_RS07070 55726abc0b95f200c727f5fdda4e6c7d 543 Gene3D G3DSA:1.20.58.220 441 538 5.6E-18 T 22-04-2016 SII_RS07070 55726abc0b95f200c727f5fdda4e6c7d 543 PANTHER PTHR10010 1 455 4.9E-125 T 22-04-2016 SII_RS07070 55726abc0b95f200c727f5fdda4e6c7d 543 Pfam PF01895 PhoU domain 456 537 8.4E-12 T 22-04-2016 IPR026022 PhoU domain SII_RS07070 55726abc0b95f200c727f5fdda4e6c7d 543 Pfam PF01895 PhoU domain 349 429 5.1E-9 T 22-04-2016 IPR026022 PhoU domain SII_RS07070 55726abc0b95f200c727f5fdda4e6c7d 543 Pfam PF02690 Na+/Pi-cotransporter 152 265 1.7E-18 T 22-04-2016 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: REACT_15518 SII_RS07070 55726abc0b95f200c727f5fdda4e6c7d 543 Pfam PF02690 Na+/Pi-cotransporter 18 153 2.5E-48 T 22-04-2016 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: REACT_15518 SII_RS00955 8464fc6a1dee8d742f8ce7de2373650f 291 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 50 77 - T 22-04-2016 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 SII_RS00955 8464fc6a1dee8d742f8ce7de2373650f 291 SMART SM00650 34 210 2.2E-84 T 22-04-2016 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 SII_RS00955 8464fc6a1dee8d742f8ce7de2373650f 291 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 18 286 55.61 T 22-04-2016 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 SII_RS00955 8464fc6a1dee8d742f8ce7de2373650f 291 Pfam PF00398 Ribosomal RNA adenine dimethylase 18 249 1.6E-65 T 22-04-2016 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm SII_RS00955 8464fc6a1dee8d742f8ce7de2373650f 291 Gene3D G3DSA:1.10.8.100 214 287 4.6E-22 T 22-04-2016 IPR023165 rRNA adenine dimethylase-like SII_RS00955 8464fc6a1dee8d742f8ce7de2373650f 291 PANTHER PTHR11727 1 291 1.3E-93 T 22-04-2016 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm SII_RS00955 8464fc6a1dee8d742f8ce7de2373650f 291 Gene3D G3DSA:3.40.50.150 3 211 9.3E-75 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SII_RS00955 8464fc6a1dee8d742f8ce7de2373650f 291 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 18 284 2.4E-83 T 22-04-2016 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 SII_RS00955 8464fc6a1dee8d742f8ce7de2373650f 291 SUPERFAMILY SSF53335 15 289 2.02E-75 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SII_RS08930 f6da89b8bd375e79336628b9ae7966d4 168 Gene3D G3DSA:3.40.630.30 2 160 2.0E-16 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SII_RS08930 f6da89b8bd375e79336628b9ae7966d4 168 Pfam PF13302 Acetyltransferase (GNAT) domain 37 150 2.1E-8 T 22-04-2016 IPR000182 GNAT domain GO:0008080 SII_RS08930 f6da89b8bd375e79336628b9ae7966d4 168 PANTHER PTHR39173 1 168 7.9E-43 T 22-04-2016 SII_RS08930 f6da89b8bd375e79336628b9ae7966d4 168 SUPERFAMILY SSF55729 1 157 2.8E-17 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SII_RS08670 0300c95af3e1579bd1f7857bac07a841 127 Gene3D G3DSA:3.30.420.80 5 127 2.9E-55 T 22-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 SII_RS08670 0300c95af3e1579bd1f7857bac07a841 127 PANTHER PTHR11759 8 127 1.2E-69 T 22-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 SII_RS08670 0300c95af3e1579bd1f7857bac07a841 127 ProSitePatterns PS00054 Ribosomal protein S11 signature. 95 117 - T 22-04-2016 IPR018102 Ribosomal S11, conserved site SII_RS08670 0300c95af3e1579bd1f7857bac07a841 127 PIRSF PIRSF002131 2 127 1.5E-51 T 22-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 SII_RS08670 0300c95af3e1579bd1f7857bac07a841 127 SUPERFAMILY SSF53137 12 127 1.63E-48 T 22-04-2016 SII_RS08670 0300c95af3e1579bd1f7857bac07a841 127 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 8 124 9.3E-58 T 22-04-2016 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 SII_RS08670 0300c95af3e1579bd1f7857bac07a841 127 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 3 127 33.361 T 22-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 SII_RS08670 0300c95af3e1579bd1f7857bac07a841 127 Pfam PF00411 Ribosomal protein S11 17 126 5.8E-51 T 22-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 SII_RS03840 6c69b091525b1f11ba72e1d759db620f 90 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 2 77 25.258 T 22-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SII_RS03840 6c69b091525b1f11ba72e1d759db620f 90 TIGRFAM TIGR00002 S16: ribosomal protein bS16 3 80 1.3E-34 T 22-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SII_RS03840 6c69b091525b1f11ba72e1d759db620f 90 PANTHER PTHR12919 2 83 4.8E-43 T 22-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SII_RS03840 6c69b091525b1f11ba72e1d759db620f 90 SUPERFAMILY SSF54565 2 87 8.37E-34 T 22-04-2016 IPR023803 Ribosomal protein S16 domain SII_RS03840 6c69b091525b1f11ba72e1d759db620f 90 Gene3D G3DSA:3.30.1320.10 2 84 1.2E-34 T 22-04-2016 IPR023803 Ribosomal protein S16 domain SII_RS03840 6c69b091525b1f11ba72e1d759db620f 90 Pfam PF00886 Ribosomal protein S16 9 67 1.7E-24 T 22-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SII_RS07235 b767066d308eb44eaebf466ce90c4fcb 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 227 4.4E-44 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SII_RS07235 b767066d308eb44eaebf466ce90c4fcb 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 4.4E-44 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SII_RS07235 b767066d308eb44eaebf466ce90c4fcb 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 4.4E-44 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SII_RS07235 b767066d308eb44eaebf466ce90c4fcb 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 4.4E-44 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SII_RS07235 b767066d308eb44eaebf466ce90c4fcb 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 4.4E-44 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SII_RS07235 b767066d308eb44eaebf466ce90c4fcb 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 4.4E-44 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SII_RS07235 b767066d308eb44eaebf466ce90c4fcb 243 SUPERFAMILY SSF51735 4 242 7.66E-82 T 22-04-2016 IPR016040 NAD(P)-binding domain SII_RS07235 b767066d308eb44eaebf466ce90c4fcb 243 PANTHER PTHR24322:SF328 153 184 1.7E-59 T 22-04-2016 SII_RS07235 b767066d308eb44eaebf466ce90c4fcb 243 PANTHER PTHR24322:SF328 10 137 1.7E-59 T 22-04-2016 SII_RS07235 b767066d308eb44eaebf466ce90c4fcb 243 Gene3D G3DSA:3.40.50.720 2 242 5.6E-87 T 22-04-2016 IPR016040 NAD(P)-binding domain SII_RS07235 b767066d308eb44eaebf466ce90c4fcb 243 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 184 1.4E-7 T 22-04-2016 SII_RS07235 b767066d308eb44eaebf466ce90c4fcb 243 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 SII_RS07235 b767066d308eb44eaebf466ce90c4fcb 243 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 8 241 2.7E-96 T 22-04-2016 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00040+1.1.1.10|KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 SII_RS07235 b767066d308eb44eaebf466ce90c4fcb 243 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 241 2.7E-63 T 22-04-2016 SII_RS07235 b767066d308eb44eaebf466ce90c4fcb 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 2.7E-17 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SII_RS07235 b767066d308eb44eaebf466ce90c4fcb 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 2.7E-17 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SII_RS07235 b767066d308eb44eaebf466ce90c4fcb 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 2.7E-17 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SII_RS07235 b767066d308eb44eaebf466ce90c4fcb 243 PANTHER PTHR24322 153 184 1.7E-59 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SII_RS07235 b767066d308eb44eaebf466ce90c4fcb 243 PANTHER PTHR24322 10 137 1.7E-59 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SII_RS07790 d3f5b0e272202840f40970dd20dcd276 120 SUPERFAMILY SSF55729 11 102 1.8E-21 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SII_RS07790 d3f5b0e272202840f40970dd20dcd276 120 Pfam PF13302 Acetyltransferase (GNAT) domain 11 100 4.4E-16 T 22-04-2016 IPR000182 GNAT domain GO:0008080 SII_RS07790 d3f5b0e272202840f40970dd20dcd276 120 PANTHER PTHR13256 20 100 4.8E-16 T 22-04-2016 SII_RS07790 d3f5b0e272202840f40970dd20dcd276 120 Gene3D G3DSA:3.40.630.30 4 102 4.5E-21 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SII_RS01495 a6bd3c92a6a9272d009b802711bbf208 169 Gene3D G3DSA:3.40.630.30 24 144 3.7E-18 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SII_RS01495 a6bd3c92a6a9272d009b802711bbf208 169 SUPERFAMILY SSF55729 5 146 5.4E-18 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SII_RS01495 a6bd3c92a6a9272d009b802711bbf208 169 Pfam PF13673 Acetyltransferase (GNAT) domain 38 138 1.0E-7 T 22-04-2016 IPR000182 GNAT domain GO:0008080 SII_RS04420 bc31489558bd98c4c44b00ee207456a7 197 Gene3D G3DSA:3.40.50.150 17 190 3.1E-33 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SII_RS04420 bc31489558bd98c4c44b00ee207456a7 197 SUPERFAMILY SSF53335 9 194 1.2E-36 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SII_RS04420 bc31489558bd98c4c44b00ee207456a7 197 PANTHER PTHR18895 1 197 1.8E-84 T 22-04-2016 SII_RS04420 bc31489558bd98c4c44b00ee207456a7 197 Pfam PF05175 Methyltransferase small domain 28 192 1.2E-49 T 22-04-2016 IPR007848 Methyltransferase small domain GO:0008168 SII_RS04420 bc31489558bd98c4c44b00ee207456a7 197 PANTHER PTHR18895:SF72 1 197 1.8E-84 T 22-04-2016 SII_RS03580 a50d0fa57b4f3dc4ec7f63d0eaf2c5c9 280 Gene3D G3DSA:3.40.50.1820 39 269 3.2E-72 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SII_RS03580 a50d0fa57b4f3dc4ec7f63d0eaf2c5c9 280 Pfam PF06028 Alpha/beta hydrolase of unknown function (DUF915) 36 270 1.0E-62 T 22-04-2016 IPR010315 Protein of unknown function DUF915, hydrolase-like SII_RS03580 a50d0fa57b4f3dc4ec7f63d0eaf2c5c9 280 SUPERFAMILY SSF53474 111 272 1.46E-9 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SII_RS03580 a50d0fa57b4f3dc4ec7f63d0eaf2c5c9 280 SUPERFAMILY SSF53474 43 77 1.46E-9 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SII_RS02145 0254333daf0ddeace12f4ca7e07c89b9 315 Hamap MF_00734 Tagatose 1,6-diphosphate aldolase [lacD]. 1 315 166.92 T 22-04-2016 IPR005927 Tagatose 1,6-diphosphate aldolase GO:0009024|GO:0019512 KEGG: 00052+4.1.2.40|MetaCyc: PWY-7077|MetaCyc: PWY-7395|UniPathway: UPA00704 SII_RS02145 0254333daf0ddeace12f4ca7e07c89b9 315 Gene3D G3DSA:3.20.20.70 2 313 1.6E-118 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SII_RS02145 0254333daf0ddeace12f4ca7e07c89b9 315 Pfam PF01791 DeoC/LacD family aldolase 20 273 4.6E-60 T 22-04-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 SII_RS02145 0254333daf0ddeace12f4ca7e07c89b9 315 PANTHER PTHR39340 1 312 2.9E-104 T 22-04-2016 SII_RS02145 0254333daf0ddeace12f4ca7e07c89b9 315 SMART SM01133 18 274 3.7E-25 T 22-04-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 SII_RS02145 0254333daf0ddeace12f4ca7e07c89b9 315 PANTHER PTHR39340:SF1 1 312 2.9E-104 T 22-04-2016 SII_RS02145 0254333daf0ddeace12f4ca7e07c89b9 315 SUPERFAMILY SSF51569 5 312 6.23E-61 T 22-04-2016 SII_RS02145 0254333daf0ddeace12f4ca7e07c89b9 315 TIGRFAM TIGR01232 lacD: tagatose 1,6-diphosphate aldolase 4 313 6.2E-131 T 22-04-2016 IPR005927 Tagatose 1,6-diphosphate aldolase GO:0009024|GO:0019512 KEGG: 00052+4.1.2.40|MetaCyc: PWY-7077|MetaCyc: PWY-7395|UniPathway: UPA00704 SII_RS01300 49f1e1a304077e180979f193a2c3d783 189 SUPERFAMILY SSF46689 2 75 2.36E-19 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SII_RS01300 49f1e1a304077e180979f193a2c3d783 189 Gene3D G3DSA:1.10.357.10 1 187 4.6E-34 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 SII_RS01300 49f1e1a304077e180979f193a2c3d783 189 Pfam PF00440 Bacterial regulatory proteins, tetR family 17 61 1.9E-16 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SII_RS01300 49f1e1a304077e180979f193a2c3d783 189 PANTHER PTHR30055 1 188 3.5E-21 T 22-04-2016 SII_RS01300 49f1e1a304077e180979f193a2c3d783 189 ProSitePatterns PS01081 TetR-type HTH domain signature. 27 57 - T 22-04-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site SII_RS01300 49f1e1a304077e180979f193a2c3d783 189 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 36 59 5.1E-10 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SII_RS01300 49f1e1a304077e180979f193a2c3d783 189 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 15 28 5.1E-10 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SII_RS07455 42e20a6a63f0b331f33420b31838b8e8 368 SUPERFAMILY SSF51419 13 243 1.83E-62 T 22-04-2016 IPR029066 PLP-binding barrel SII_RS07455 42e20a6a63f0b331f33420b31838b8e8 368 Hamap MF_01201 Alanine racemase. 6 367 34.001 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SII_RS07455 42e20a6a63f0b331f33420b31838b8e8 368 Gene3D G3DSA:2.40.37.10 223 367 3.4E-52 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 SII_RS07455 42e20a6a63f0b331f33420b31838b8e8 368 PRINTS PR00992 Alanine racemase signature 32 48 1.5E-64 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SII_RS07455 42e20a6a63f0b331f33420b31838b8e8 368 PRINTS PR00992 Alanine racemase signature 67 85 1.5E-64 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SII_RS07455 42e20a6a63f0b331f33420b31838b8e8 368 PRINTS PR00992 Alanine racemase signature 295 312 1.5E-64 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SII_RS07455 42e20a6a63f0b331f33420b31838b8e8 368 PRINTS PR00992 Alanine racemase signature 161 172 1.5E-64 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SII_RS07455 42e20a6a63f0b331f33420b31838b8e8 368 PRINTS PR00992 Alanine racemase signature 275 290 1.5E-64 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SII_RS07455 42e20a6a63f0b331f33420b31838b8e8 368 PRINTS PR00992 Alanine racemase signature 201 228 1.5E-64 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SII_RS07455 42e20a6a63f0b331f33420b31838b8e8 368 PRINTS PR00992 Alanine racemase signature 127 139 1.5E-64 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SII_RS07455 42e20a6a63f0b331f33420b31838b8e8 368 PRINTS PR00992 Alanine racemase signature 258 273 1.5E-64 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SII_RS07455 42e20a6a63f0b331f33420b31838b8e8 368 PRINTS PR00992 Alanine racemase signature 349 362 1.5E-64 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SII_RS07455 42e20a6a63f0b331f33420b31838b8e8 368 PANTHER PTHR30511:SF0 3 366 3.1E-141 T 22-04-2016 SII_RS07455 42e20a6a63f0b331f33420b31838b8e8 368 SUPERFAMILY SSF50621 237 367 2.37E-47 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 SII_RS07455 42e20a6a63f0b331f33420b31838b8e8 368 TIGRFAM TIGR00492 alr: alanine racemase 8 366 4.2E-104 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SII_RS07455 42e20a6a63f0b331f33420b31838b8e8 368 Pfam PF00842 Alanine racemase, C-terminal domain 243 366 6.2E-37 T 22-04-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SII_RS07455 42e20a6a63f0b331f33420b31838b8e8 368 Pfam PF01168 Alanine racemase, N-terminal domain 13 228 1.2E-61 T 22-04-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SII_RS07455 42e20a6a63f0b331f33420b31838b8e8 368 Gene3D G3DSA:3.20.20.10 15 222 2.2E-65 T 22-04-2016 IPR029066 PLP-binding barrel SII_RS07455 42e20a6a63f0b331f33420b31838b8e8 368 SMART SM01005 242 367 1.7E-61 T 22-04-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SII_RS07455 42e20a6a63f0b331f33420b31838b8e8 368 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 37 47 - T 22-04-2016 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SII_RS07455 42e20a6a63f0b331f33420b31838b8e8 368 PANTHER PTHR30511 3 366 3.1E-141 T 22-04-2016 SII_RS05345 9d0298f99b182420e9cd73d1e9eb68e3 239 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SII_RS05345 9d0298f99b182420e9cd73d1e9eb68e3 239 Pfam PF00005 ABC transporter 18 162 3.4E-36 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SII_RS05345 9d0298f99b182420e9cd73d1e9eb68e3 239 PANTHER PTHR24220 3 235 2.6E-124 T 22-04-2016 SII_RS05345 9d0298f99b182420e9cd73d1e9eb68e3 239 PANTHER PTHR24220:SF434 3 235 2.6E-124 T 22-04-2016 SII_RS05345 9d0298f99b182420e9cd73d1e9eb68e3 239 Gene3D G3DSA:3.40.50.300 1 235 6.7E-78 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS05345 9d0298f99b182420e9cd73d1e9eb68e3 239 SMART SM00382 26 212 1.6E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain SII_RS05345 9d0298f99b182420e9cd73d1e9eb68e3 239 SUPERFAMILY SSF52540 1 236 2.6E-74 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS04875 f3abd6715ed9e1341edddc30fbf50081 229 Pfam PF04816 tRNA (adenine(22)-N(1))-methyltransferase 23 223 1.6E-75 T 22-04-2016 IPR006901 tRNA methyltransferase TrmK GO:0016429 SII_RS04875 f3abd6715ed9e1341edddc30fbf50081 229 Gene3D G3DSA:3.40.50.150 10 155 1.5E-11 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SII_RS04875 f3abd6715ed9e1341edddc30fbf50081 229 PIRSF PIRSF018637 4 228 2.4E-74 T 22-04-2016 IPR006901 tRNA methyltransferase TrmK GO:0016429 SII_RS04875 f3abd6715ed9e1341edddc30fbf50081 229 SUPERFAMILY SSF53335 8 140 5.12E-12 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SII_RS04875 f3abd6715ed9e1341edddc30fbf50081 229 PANTHER PTHR38451 2 228 6.9E-75 T 22-04-2016 SII_RS07075 dec3c2247784528ad3975d4b841200d7 116 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 2 116 19.973 T 22-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 SII_RS07075 dec3c2247784528ad3975d4b841200d7 116 SUPERFAMILY SSF89919 1 113 1.7E-30 T 22-04-2016 IPR023799 Ribosome-binding factor A domain SII_RS07075 dec3c2247784528ad3975d4b841200d7 116 Gene3D G3DSA:3.30.300.20 3 115 4.2E-38 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta SII_RS07075 dec3c2247784528ad3975d4b841200d7 116 ProSitePatterns PS01319 Ribosome-binding factor A signature. 76 97 - T 22-04-2016 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 SII_RS07075 dec3c2247784528ad3975d4b841200d7 116 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 8 97 4.0E-41 T 22-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 SII_RS07075 dec3c2247784528ad3975d4b841200d7 116 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 1 115 1.9E-31 T 22-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 SII_RS07075 dec3c2247784528ad3975d4b841200d7 116 PANTHER PTHR33515 1 116 6.0E-42 T 22-04-2016 SII_RS07075 dec3c2247784528ad3975d4b841200d7 116 Pfam PF02033 Ribosome-binding factor A 6 110 1.2E-30 T 22-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 SII_RS02195 4bb2b4b545515a0a8210c48138cbca73 106 PIRSF PIRSF000699 1 106 1.2E-38 T 22-04-2016 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SII_RS02195 4bb2b4b545515a0a8210c48138cbca73 106 SUPERFAMILY SSF46973 1 102 1.44E-33 T 22-04-2016 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SII_RS02195 4bb2b4b545515a0a8210c48138cbca73 106 PANTHER PTHR34382:SF3 1 102 2.4E-65 T 22-04-2016 SII_RS02195 4bb2b4b545515a0a8210c48138cbca73 106 PANTHER PTHR34382 1 102 2.4E-65 T 22-04-2016 SII_RS02195 4bb2b4b545515a0a8210c48138cbca73 106 TIGRFAM TIGR00823 EIIA-LAC: PTS system, lactose-specific IIa component 4 102 1.1E-45 T 22-04-2016 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SII_RS02195 4bb2b4b545515a0a8210c48138cbca73 106 Pfam PF02255 PTS system, Lactose/Cellobiose specific IIA subunit 10 101 2.8E-34 T 22-04-2016 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SII_RS02195 4bb2b4b545515a0a8210c48138cbca73 106 Gene3D G3DSA:1.20.58.80 2 102 5.4E-36 T 22-04-2016 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SII_RS08230 a750b85b59ce09a9fc4f6623b7935e9f 208 Pfam PF14794 Domain of unknown function (DUF4479) 23 91 8.4E-24 T 22-04-2016 IPR027855 Domain of unknown function DUF4479 SII_RS08230 a750b85b59ce09a9fc4f6623b7935e9f 208 Pfam PF01588 Putative tRNA binding domain 96 198 5.7E-18 T 22-04-2016 IPR002547 tRNA-binding domain GO:0000049 Reactome: REACT_71 SII_RS08230 a750b85b59ce09a9fc4f6623b7935e9f 208 SUPERFAMILY SSF50249 94 200 2.13E-27 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SII_RS08230 a750b85b59ce09a9fc4f6623b7935e9f 208 Gene3D G3DSA:2.40.50.140 93 205 1.5E-38 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SII_RS08230 a750b85b59ce09a9fc4f6623b7935e9f 208 PANTHER PTHR10947:SF0 50 203 2.5E-19 T 22-04-2016 SII_RS08230 a750b85b59ce09a9fc4f6623b7935e9f 208 PANTHER PTHR10947 50 203 2.5E-19 T 22-04-2016 SII_RS08230 a750b85b59ce09a9fc4f6623b7935e9f 208 Gene3D G3DSA:3.30.1940.10 21 92 7.7E-26 T 22-04-2016 IPR027855 Domain of unknown function DUF4479 SII_RS06730 7d735dddc27b7bde2c344fc959fbf215 535 SUPERFAMILY SSF109604 331 482 2.69E-28 T 22-04-2016 SII_RS06730 7d735dddc27b7bde2c344fc959fbf215 535 SMART SM00322 223 290 5.9E-7 T 22-04-2016 IPR004087 K Homology domain GO:0003676 SII_RS06730 7d735dddc27b7bde2c344fc959fbf215 535 TIGRFAM TIGR03319 RNase_Y: ribonuclease Y 8 535 6.8E-231 T 22-04-2016 IPR017705 Ribonuclease Y GO:0003723|GO:0006402|GO:0016020 SII_RS06730 7d735dddc27b7bde2c344fc959fbf215 535 SUPERFAMILY SSF54791 225 319 1.02E-15 T 22-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 SII_RS06730 7d735dddc27b7bde2c344fc959fbf215 535 PANTHER PTHR12826 202 534 9.7E-136 T 22-04-2016 SII_RS06730 7d735dddc27b7bde2c344fc959fbf215 535 Pfam PF01966 HD domain 352 443 2.4E-17 T 22-04-2016 IPR006674 HD domain SII_RS06730 7d735dddc27b7bde2c344fc959fbf215 535 Hamap MF_00335 Ribonuclease Y [rny]. 2 535 24.825 T 22-04-2016 IPR017705 Ribonuclease Y GO:0003723|GO:0006402|GO:0016020 SII_RS06730 7d735dddc27b7bde2c344fc959fbf215 535 Gene3D G3DSA:3.30.1370.10 235 313 1.2E-7 T 22-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 SII_RS06730 7d735dddc27b7bde2c344fc959fbf215 535 Pfam PF12072 Domain of unknown function (DUF3552) 4 220 1.9E-46 T 22-04-2016 IPR022711 Ribonuclease Y, N-terminal SII_RS06730 7d735dddc27b7bde2c344fc959fbf215 535 Gene3D G3DSA:1.10.3210.10 331 511 6.5E-42 T 22-04-2016 IPR006674 HD domain SII_RS06730 7d735dddc27b7bde2c344fc959fbf215 535 Pfam PF00013 KH domain 229 282 1.8E-6 T 22-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 SII_RS06730 7d735dddc27b7bde2c344fc959fbf215 535 SMART SM00471 347 453 3.2E-14 T 22-04-2016 IPR003607 HD/PDEase domain SII_RS06730 7d735dddc27b7bde2c344fc959fbf215 535 TIGRFAM TIGR00277 HDIG: HDIG domain 347 424 3.3E-24 T 22-04-2016 IPR006675 HDIG domain SII_RS08915 f92254c1a954139264db688b1ee07c26 243 PANTHER PTHR39181:SF1 2 243 1.3E-41 T 22-04-2016 SII_RS08915 f92254c1a954139264db688b1ee07c26 243 PANTHER PTHR39181 2 243 1.3E-41 T 22-04-2016 SII_RS08915 f92254c1a954139264db688b1ee07c26 243 PIRSF PIRSF016557 1 243 4.7E-77 T 22-04-2016 IPR016667 Capsular polysaccharide synthesis, CpsB/CapC GO:0004725|GO:0030145 UniPathway: UPA00934 SII_RS08915 f92254c1a954139264db688b1ee07c26 243 Gene3D G3DSA:3.20.20.140 2 238 2.1E-11 T 22-04-2016 SII_RS08915 f92254c1a954139264db688b1ee07c26 243 SUPERFAMILY SSF51556 2 233 6.8E-23 T 22-04-2016 IPR032466 Metal-dependent hydrolase SII_RS08190 1f292836891b4d13acc4266cd301c18f 282 Pfam PF03609 PTS system sorbose-specific iic component 5 254 3.7E-63 T 22-04-2016 IPR004700 Phosphotransferase system, sorbose-specific IIC subunit GO:0009401|GO:0016021 SII_RS01155 cb885d21f8ec8f985609d6e867657ead 426 PANTHER PTHR10572:SF6 8 424 2.9E-139 T 22-04-2016 SII_RS01155 cb885d21f8ec8f985609d6e867657ead 426 Pfam PF00368 Hydroxymethylglutaryl-coenzyme A reductase 13 383 8.6E-108 T 22-04-2016 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|UniPathway: UPA00058 SII_RS01155 cb885d21f8ec8f985609d6e867657ead 426 TIGRFAM TIGR00532 HMG_CoA_R_NAD: hydroxymethylglutaryl-CoA reductase, degradative 7 382 4.4E-98 T 22-04-2016 IPR004553 Hydroxymethylglutaryl-CoA reductase, bacterial-type GO:0015936|GO:0016616|GO:0050662 SII_RS01155 cb885d21f8ec8f985609d6e867657ead 426 PANTHER PTHR10572 8 424 2.9E-139 T 22-04-2016 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|UniPathway: UPA00058 SII_RS01155 cb885d21f8ec8f985609d6e867657ead 426 Gene3D G3DSA:3.90.770.10 5 114 3.8E-87 T 22-04-2016 IPR023074 Hydroxymethylglutaryl-CoA reductase, class I/II, catalytic domain GO:0004420|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|UniPathway: UPA00058 SII_RS01155 cb885d21f8ec8f985609d6e867657ead 426 Gene3D G3DSA:3.90.770.10 230 371 3.8E-87 T 22-04-2016 IPR023074 Hydroxymethylglutaryl-CoA reductase, class I/II, catalytic domain GO:0004420|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|UniPathway: UPA00058 SII_RS01155 cb885d21f8ec8f985609d6e867657ead 426 Gene3D G3DSA:3.30.70.420 115 216 6.7E-41 T 22-04-2016 IPR009023 Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding domain GO:0050662 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|UniPathway: UPA00058 SII_RS01155 cb885d21f8ec8f985609d6e867657ead 426 SUPERFAMILY SSF55035 110 216 6.28E-32 T 22-04-2016 IPR009023 Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding domain GO:0050662 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|UniPathway: UPA00058 SII_RS01155 cb885d21f8ec8f985609d6e867657ead 426 SUPERFAMILY SSF56542 225 424 9.81E-100 T 22-04-2016 IPR009029 Hydroxymethylglutaryl-CoA reductase, class I/II, substrate-binding domain GO:0015936|GO:0016616|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|UniPathway: UPA00058 SII_RS01155 cb885d21f8ec8f985609d6e867657ead 426 SUPERFAMILY SSF56542 6 117 9.81E-100 T 22-04-2016 IPR009029 Hydroxymethylglutaryl-CoA reductase, class I/II, substrate-binding domain GO:0015936|GO:0016616|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|UniPathway: UPA00058 SII_RS00025 987d164ae6bed21c8e21635cb0ef2bf3 371 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 371 43.27 T 22-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 SII_RS00025 987d164ae6bed21c8e21635cb0ef2bf3 371 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 371 3.2E-148 T 22-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 SII_RS00025 987d164ae6bed21c8e21635cb0ef2bf3 371 SUPERFAMILY SSF52540 3 309 1.38E-83 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS00025 987d164ae6bed21c8e21635cb0ef2bf3 371 Gene3D G3DSA:3.10.20.30 275 371 1.2E-49 T 22-04-2016 IPR012675 Beta-grasp domain SII_RS00025 987d164ae6bed21c8e21635cb0ef2bf3 371 SUPERFAMILY SSF81271 287 371 1.16E-35 T 22-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 SII_RS00025 987d164ae6bed21c8e21635cb0ef2bf3 371 Pfam PF01926 50S ribosome-binding GTPase 5 114 4.4E-24 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 SII_RS00025 987d164ae6bed21c8e21635cb0ef2bf3 371 Gene3D G3DSA:3.40.50.300 206 274 1.4E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS00025 987d164ae6bed21c8e21635cb0ef2bf3 371 Gene3D G3DSA:3.40.50.300 4 134 1.4E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS00025 987d164ae6bed21c8e21635cb0ef2bf3 371 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 2.2E-35 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 SII_RS00025 987d164ae6bed21c8e21635cb0ef2bf3 371 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 85 2.2E-35 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 SII_RS00025 987d164ae6bed21c8e21635cb0ef2bf3 371 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 2.2E-35 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 SII_RS00025 987d164ae6bed21c8e21635cb0ef2bf3 371 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 2.2E-35 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 SII_RS00025 987d164ae6bed21c8e21635cb0ef2bf3 371 Gene3D G3DSA:1.10.150.300 135 205 1.1E-28 T 22-04-2016 IPR023192 TGS-like domain SII_RS00025 987d164ae6bed21c8e21635cb0ef2bf3 371 PANTHER PTHR23305:SF12 1 371 3.2E-200 T 22-04-2016 SII_RS00025 987d164ae6bed21c8e21635cb0ef2bf3 371 PANTHER PTHR23305 1 371 3.2E-200 T 22-04-2016 SII_RS00025 987d164ae6bed21c8e21635cb0ef2bf3 371 PIRSF PIRSF006641 1 371 1.9E-153 T 22-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 SII_RS00025 987d164ae6bed21c8e21635cb0ef2bf3 371 Pfam PF06071 Protein of unknown function (DUF933) 287 370 2.5E-40 T 22-04-2016 IPR013029 Domain of unknown function DUF933 SII_RS00325 130d35bdf3cb40e52fc952581c7bb6e7 124 SUPERFAMILY SSF53062 4 120 2.88E-31 T 22-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 SII_RS00325 130d35bdf3cb40e52fc952581c7bb6e7 124 PANTHER PTHR38594 2 122 2.1E-32 T 22-04-2016 SII_RS00325 130d35bdf3cb40e52fc952581c7bb6e7 124 Gene3D G3DSA:3.40.50.510 2 123 1.5E-39 T 22-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 SII_RS00325 130d35bdf3cb40e52fc952581c7bb6e7 124 Pfam PF03610 PTS system fructose IIA component 5 113 5.4E-24 T 22-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 SII_RS00325 130d35bdf3cb40e52fc952581c7bb6e7 124 PANTHER PTHR38594:SF1 2 122 2.1E-32 T 22-04-2016 SII_RS00325 130d35bdf3cb40e52fc952581c7bb6e7 124 TIGRFAM TIGR02364 dha_pts: dihydroxyacetone kinase, phosphotransfer subunit 4 119 5.1E-36 T 22-04-2016 IPR012844 Dihydroxyacetone kinase phosphotransferase subunit, N-terminal domain SII_RS01925 a1f8e0765788b5ca23637eee5cc58abe 684 PANTHER PTHR10110:SF120 3 673 4.1E-174 T 22-04-2016 SII_RS01925 a1f8e0765788b5ca23637eee5cc58abe 684 PANTHER PTHR10110 3 673 4.1E-174 T 22-04-2016 IPR018422 Cation/H+ exchanger, CPA1 family GO:0006812|GO:0015299|GO:0016021 Reactome: REACT_15518 SII_RS01925 a1f8e0765788b5ca23637eee5cc58abe 684 Pfam PF00999 Sodium/hydrogen exchanger family 8 398 1.9E-37 T 22-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 SII_RS02795 945a117229f42ae6a5f9ab137ecd642c 272 Gene3D G3DSA:3.40.50.10330 28 122 6.1E-18 T 22-04-2016 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 GO:0003951|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 SII_RS02795 945a117229f42ae6a5f9ab137ecd642c 272 SUPERFAMILY SSF111331 27 266 6.93E-60 T 22-04-2016 IPR016064 NAD kinase/diacylglycerol kinase-like domain SII_RS02795 945a117229f42ae6a5f9ab137ecd642c 272 Gene3D G3DSA:2.60.200.30 123 241 8.0E-31 T 22-04-2016 IPR017437 ATP-NAD kinase, PpnK-type, all-beta GO:0003951|GO:0008152|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 SII_RS02795 945a117229f42ae6a5f9ab137ecd642c 272 Hamap MF_00361 NAD kinase [nadK]. 6 268 24.207 T 22-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 SII_RS02795 945a117229f42ae6a5f9ab137ecd642c 272 PANTHER PTHR20275 32 264 1.6E-53 T 22-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 SII_RS02795 945a117229f42ae6a5f9ab137ecd642c 272 Pfam PF01513 ATP-NAD kinase 38 225 3.4E-22 T 22-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 SII_RS04555 a2a480d929efac0a4d863670babe61d2 376 PANTHER PTHR13932:SF5 4 376 4.9E-155 T 22-04-2016 SII_RS04555 a2a480d929efac0a4d863670babe61d2 376 Gene3D G3DSA:3.80.30.20 4 237 5.4E-37 T 22-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe SII_RS04555 a2a480d929efac0a4d863670babe61d2 376 Pfam PF04055 Radical SAM superfamily 10 173 1.2E-19 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 SII_RS04555 a2a480d929efac0a4d863670babe61d2 376 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 7 364 3.5E-112 T 22-04-2016 IPR004559 Coproporphyrinogen III oxidase, oxygen-independent related GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00071+1.3.99.-|KEGG: 00280+1.3.99.-|KEGG: 00281+1.3.99.-|KEGG: 00362+1.3.99.-|KEGG: 00626+1.3.99.-|KEGG: 00930+1.3.99.- SII_RS04555 a2a480d929efac0a4d863670babe61d2 376 SUPERFAMILY SSF102114 2 374 2.62E-113 T 22-04-2016 SII_RS04555 a2a480d929efac0a4d863670babe61d2 376 SMART SM00729 5 221 3.1E-54 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 SII_RS04555 a2a480d929efac0a4d863670babe61d2 376 Pfam PF06969 HemN C-terminal domain 299 364 1.5E-19 T 22-04-2016 IPR010723 HemN, C-terminal SII_RS04555 a2a480d929efac0a4d863670babe61d2 376 PANTHER PTHR13932 4 376 4.9E-155 T 22-04-2016 SII_RS08675 b0e79e093073ab15615b046b7b743a2f 121 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 113 3.2E-51 T 22-04-2016 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SII_RS08675 b0e79e093073ab15615b046b7b743a2f 121 PIRSF PIRSF002134 1 121 1.2E-42 T 22-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SII_RS08675 b0e79e093073ab15615b046b7b743a2f 121 ProSitePatterns PS00646 Ribosomal protein S13 signature. 87 100 - T 22-04-2016 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 SII_RS08675 b0e79e093073ab15615b046b7b743a2f 121 Gene3D G3DSA:1.10.8.50 1 71 6.4E-29 T 22-04-2016 SII_RS08675 b0e79e093073ab15615b046b7b743a2f 121 PANTHER PTHR10871 1 121 4.2E-68 T 22-04-2016 SII_RS08675 b0e79e093073ab15615b046b7b743a2f 121 Gene3D G3DSA:4.10.910.10 72 121 1.7E-27 T 22-04-2016 IPR027437 30s ribosomal protein S13, C-terminal SII_RS08675 b0e79e093073ab15615b046b7b743a2f 121 SUPERFAMILY SSF46946 2 112 1.06E-43 T 22-04-2016 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 SII_RS08675 b0e79e093073ab15615b046b7b743a2f 121 Pfam PF00416 Ribosomal protein S13/S18 62 108 3.1E-18 T 22-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SII_RS08675 b0e79e093073ab15615b046b7b743a2f 121 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 119 27.139 T 22-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SII_RS01835 be258e55da7dcbfe62c9a44457931c8b 264 PANTHER PTHR21198 1 264 1.0E-116 T 22-04-2016 SII_RS01835 be258e55da7dcbfe62c9a44457931c8b 264 Gene3D G3DSA:3.40.50.1860 2 173 6.7E-59 T 22-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SII_RS01835 be258e55da7dcbfe62c9a44457931c8b 264 Pfam PF01177 Asp/Glu/Hydantoin racemase 6 213 2.0E-37 T 22-04-2016 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SII_RS01835 be258e55da7dcbfe62c9a44457931c8b 264 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 179 189 - T 22-04-2016 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SII_RS01835 be258e55da7dcbfe62c9a44457931c8b 264 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 70 78 - T 22-04-2016 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SII_RS01835 be258e55da7dcbfe62c9a44457931c8b 264 SUPERFAMILY SSF53681 110 262 3.4E-42 T 22-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SII_RS01835 be258e55da7dcbfe62c9a44457931c8b 264 SUPERFAMILY SSF53681 5 106 9.81E-36 T 22-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SII_RS01835 be258e55da7dcbfe62c9a44457931c8b 264 Hamap MF_00258 Glutamate racemase [murI]. 4 256 40.826 T 22-04-2016 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SII_RS01835 be258e55da7dcbfe62c9a44457931c8b 264 TIGRFAM TIGR00067 glut_race: glutamate racemase 6 254 2.3E-79 T 22-04-2016 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SII_RS01835 be258e55da7dcbfe62c9a44457931c8b 264 PANTHER PTHR21198:SF2 1 264 1.0E-116 T 22-04-2016 SII_RS02950 39a700a69e31d7abdb85e656cb4c9ca9 233 Gene3D G3DSA:3.40.390.10 71 232 8.0E-19 T 22-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 SII_RS02950 39a700a69e31d7abdb85e656cb4c9ca9 233 Pfam PF00413 Matrixin 101 231 4.4E-8 T 22-04-2016 IPR001818 Peptidase M10, metallopeptidase GO:0004222|GO:0006508|GO:0008270|GO:0031012 SII_RS02950 39a700a69e31d7abdb85e656cb4c9ca9 233 SUPERFAMILY SSF55486 71 231 1.59E-23 T 22-04-2016 SII_RS07540 dd2039915785db362f430d749efa65bf 152 ProSitePatterns PS01117 MarR-type HTH domain signature. 66 101 - T 22-04-2016 IPR023187 Transcriptional regulator MarR-type, conserved site SII_RS07540 dd2039915785db362f430d749efa65bf 152 Gene3D G3DSA:1.10.10.10 3 142 1.1E-33 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SII_RS07540 dd2039915785db362f430d749efa65bf 152 SMART SM00347 21 128 7.5E-4 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SII_RS07540 dd2039915785db362f430d749efa65bf 152 Pfam PF12802 MarR family 33 92 1.2E-11 T 22-04-2016 SII_RS07540 dd2039915785db362f430d749efa65bf 152 SUPERFAMILY SSF46785 6 145 6.59E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SII_RS07540 dd2039915785db362f430d749efa65bf 152 PANTHER PTHR33164:SF16 1 152 7.3E-15 T 22-04-2016 SII_RS07540 dd2039915785db362f430d749efa65bf 152 PANTHER PTHR33164 1 152 7.3E-15 T 22-04-2016 SII_RS00380 587f845302335fefb9af30301b9e8d33 255 Pfam PF01473 Putative cell wall binding repeat 193 204 0.013 T 22-04-2016 IPR018337 Cell wall/choline-binding repeat SII_RS00380 587f845302335fefb9af30301b9e8d33 255 Pfam PF01473 Putative cell wall binding repeat 116 130 3.3E-5 T 22-04-2016 IPR018337 Cell wall/choline-binding repeat SII_RS00380 587f845302335fefb9af30301b9e8d33 255 Pfam PF01473 Putative cell wall binding repeat 68 85 0.0079 T 22-04-2016 IPR018337 Cell wall/choline-binding repeat SII_RS00380 587f845302335fefb9af30301b9e8d33 255 Gene3D G3DSA:2.10.270.10 158 223 1.5E-12 T 22-04-2016 SII_RS00380 587f845302335fefb9af30301b9e8d33 255 Gene3D G3DSA:2.10.270.10 46 105 6.5E-9 T 22-04-2016 SII_RS00380 587f845302335fefb9af30301b9e8d33 255 Gene3D G3DSA:2.10.270.10 106 157 3.1E-18 T 22-04-2016 SII_RS00380 587f845302335fefb9af30301b9e8d33 255 Gene3D G3DSA:2.10.270.10 224 249 6.6E-5 T 22-04-2016 SII_RS00380 587f845302335fefb9af30301b9e8d33 255 SUPERFAMILY SSF69360 48 248 1.18E-35 T 22-04-2016 SII_RS06950 5c424fe799a272daafdaf29066b98173 293 Gene3D G3DSA:3.20.20.70 1 293 5.8E-103 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SII_RS06950 5c424fe799a272daafdaf29066b98173 293 PANTHER PTHR30304 1 293 4.6E-92 T 22-04-2016 SII_RS06950 5c424fe799a272daafdaf29066b98173 293 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 133 144 - T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 SII_RS06950 5c424fe799a272daafdaf29066b98173 293 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 74 87 - T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 SII_RS06950 5c424fe799a272daafdaf29066b98173 293 SUPERFAMILY SSF51569 1 293 1.5E-96 T 22-04-2016 SII_RS06950 5c424fe799a272daafdaf29066b98173 293 TIGRFAM TIGR01859 fruc_bis_ald_: fructose-1,6-bisphosphate aldolase, class II 3 293 2.7E-122 T 22-04-2016 IPR011289 Fructose-1,6-bisphosphate aldolase, class 2 GO:0004332|GO:0006096|GO:0008270|GO:0030388 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385|UniPathway: UPA00109 SII_RS06950 5c424fe799a272daafdaf29066b98173 293 Pfam PF01116 Fructose-bisphosphate aldolase class-II 6 292 4.9E-95 T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 SII_RS06950 5c424fe799a272daafdaf29066b98173 293 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 1 293 6.9E-93 T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 SII_RS06950 5c424fe799a272daafdaf29066b98173 293 PIRSF PIRSF001359 1 293 8.9E-117 T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 SII_RS08530 dee6a2a19df77d2e47b0e59571ae3081 147 Gene3D G3DSA:2.70.40.10 10 146 4.8E-37 T 22-04-2016 IPR029054 dUTPase-like SII_RS08530 dee6a2a19df77d2e47b0e59571ae3081 147 SUPERFAMILY SSF51283 12 146 2.36E-34 T 22-04-2016 IPR029054 dUTPase-like SII_RS08530 dee6a2a19df77d2e47b0e59571ae3081 147 PANTHER PTHR11241 1 146 1.3E-22 T 22-04-2016 SII_RS08530 dee6a2a19df77d2e47b0e59571ae3081 147 Pfam PF00692 dUTPase 18 146 9.7E-16 T 22-04-2016 IPR008180 Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase GO:0016787|GO:0046080 SII_RS01690 7d2e1c146bc8a22ef46ba92d135dd4c5 298 Pfam PF01435 Peptidase family M48 77 298 7.6E-37 T 22-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 SII_RS01690 7d2e1c146bc8a22ef46ba92d135dd4c5 298 PANTHER PTHR10120:SF19 16 298 1.5E-95 T 22-04-2016 SII_RS01690 7d2e1c146bc8a22ef46ba92d135dd4c5 298 PANTHER PTHR10120 16 298 1.5E-95 T 22-04-2016 SII_RS01690 7d2e1c146bc8a22ef46ba92d135dd4c5 298 Gene3D G3DSA:3.30.2010.10 70 159 2.7E-33 T 22-04-2016 SII_RS01690 7d2e1c146bc8a22ef46ba92d135dd4c5 298 Hamap MF_00188 Protease HtpX [htpX]. 10 298 28.029 T 22-04-2016 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 SII_RS02645 f315c4d13b5fb7c2de92c2f7a563fc0b 760 SUPERFAMILY SSF52540 1 644 2.57E-177 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS02645 f315c4d13b5fb7c2de92c2f7a563fc0b 760 Gene3D G3DSA:3.40.50.300 554 644 2.5E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS02645 f315c4d13b5fb7c2de92c2f7a563fc0b 760 Gene3D G3DSA:3.40.50.300 284 385 2.5E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS02645 f315c4d13b5fb7c2de92c2f7a563fc0b 760 Gene3D G3DSA:1.10.10.160 112 185 7.9E-26 T 22-04-2016 IPR013986 DExx box DNA helicase domain SII_RS02645 f315c4d13b5fb7c2de92c2f7a563fc0b 760 TIGRFAM TIGR01073 pcrA: ATP-dependent DNA helicase PcrA 4 758 0.0 T 22-04-2016 IPR005751 ATP-dependent DNA helicase PcrA GO:0004003|GO:0005737|GO:0006268 SII_RS02645 f315c4d13b5fb7c2de92c2f7a563fc0b 760 Pfam PF13361 UvrD-like helicase C-terminal domain 276 618 3.2E-77 T 22-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 SII_RS02645 f315c4d13b5fb7c2de92c2f7a563fc0b 760 PANTHER PTHR11070 1 512 6.2E-232 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 SII_RS02645 f315c4d13b5fb7c2de92c2f7a563fc0b 760 PANTHER PTHR11070 679 759 6.2E-232 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 SII_RS02645 f315c4d13b5fb7c2de92c2f7a563fc0b 760 PANTHER PTHR11070 530 659 6.2E-232 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 SII_RS02645 f315c4d13b5fb7c2de92c2f7a563fc0b 760 Pfam PF00580 UvrD/REP helicase N-terminal domain 8 270 8.4E-80 T 22-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 SII_RS02645 f315c4d13b5fb7c2de92c2f7a563fc0b 760 PANTHER PTHR11070:SF7 1 512 6.2E-232 T 22-04-2016 SII_RS02645 f315c4d13b5fb7c2de92c2f7a563fc0b 760 PANTHER PTHR11070:SF7 679 759 6.2E-232 T 22-04-2016 SII_RS02645 f315c4d13b5fb7c2de92c2f7a563fc0b 760 PANTHER PTHR11070:SF7 530 659 6.2E-232 T 22-04-2016 SII_RS02645 f315c4d13b5fb7c2de92c2f7a563fc0b 760 Gene3D G3DSA:1.10.486.10 386 542 1.1E-43 T 22-04-2016 SII_RS02645 f315c4d13b5fb7c2de92c2f7a563fc0b 760 Gene3D G3DSA:3.40.50.300 3 107 4.5E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS02645 f315c4d13b5fb7c2de92c2f7a563fc0b 760 Gene3D G3DSA:3.40.50.300 186 283 4.5E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS07265 80bbfbcfd4368c0cf8a555a2e698672a 263 PANTHER PTHR11941 2 260 1.1E-96 T 22-04-2016 SII_RS07265 80bbfbcfd4368c0cf8a555a2e698672a 263 Pfam PF00378 Enoyl-CoA hydratase/isomerase 11 262 3.0E-48 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 SII_RS07265 80bbfbcfd4368c0cf8a555a2e698672a 263 Gene3D G3DSA:3.90.226.10 1 261 8.7E-72 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SII_RS07265 80bbfbcfd4368c0cf8a555a2e698672a 263 PANTHER PTHR11941:SF76 2 260 1.1E-96 T 22-04-2016 SII_RS07265 80bbfbcfd4368c0cf8a555a2e698672a 263 SUPERFAMILY SSF52096 1 262 9.96E-71 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SII_RS00975 d24dcb89ef06ab07ff53b5e9056c9abd 219 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 5 213 1.0E-81 T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 SII_RS00975 d24dcb89ef06ab07ff53b5e9056c9abd 219 Gene3D G3DSA:3.20.20.70 1 217 4.6E-91 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SII_RS00975 d24dcb89ef06ab07ff53b5e9056c9abd 219 PIRSF PIRSF001461 1 219 1.4E-86 T 22-04-2016 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 SII_RS00975 d24dcb89ef06ab07ff53b5e9056c9abd 219 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 135 157 - T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 SII_RS00975 d24dcb89ef06ab07ff53b5e9056c9abd 219 PANTHER PTHR11749 2 203 7.7E-113 T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 SII_RS00975 d24dcb89ef06ab07ff53b5e9056c9abd 219 SUPERFAMILY SSF51366 3 205 1.95E-66 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 SII_RS00975 d24dcb89ef06ab07ff53b5e9056c9abd 219 Pfam PF00834 Ribulose-phosphate 3 epimerase family 5 202 5.8E-75 T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 SII_RS01390 f18cf8f4dd739e5f2b3a7d101d511464 444 Pfam PF00005 ABC transporter 264 389 3.9E-19 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SII_RS01390 f18cf8f4dd739e5f2b3a7d101d511464 444 Pfam PF00005 ABC transporter 15 161 8.6E-22 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SII_RS01390 f18cf8f4dd739e5f2b3a7d101d511464 444 SMART SM00382 23 209 8.2E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain SII_RS01390 f18cf8f4dd739e5f2b3a7d101d511464 444 SMART SM00382 261 444 6.7E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain SII_RS01390 f18cf8f4dd739e5f2b3a7d101d511464 444 SUPERFAMILY SSF52540 238 437 2.33E-35 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS01390 f18cf8f4dd739e5f2b3a7d101d511464 444 SUPERFAMILY SSF52540 6 211 4.05E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS01390 f18cf8f4dd739e5f2b3a7d101d511464 444 PANTHER PTHR24220 11 355 1.1E-54 T 22-04-2016 SII_RS01390 f18cf8f4dd739e5f2b3a7d101d511464 444 Gene3D G3DSA:3.40.50.300 239 434 5.0E-35 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS01390 f18cf8f4dd739e5f2b3a7d101d511464 444 Gene3D G3DSA:3.40.50.300 12 214 5.2E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS01390 f18cf8f4dd739e5f2b3a7d101d511464 444 PANTHER PTHR24220:SF558 11 355 1.1E-54 T 22-04-2016 SII_RS07120 0b26956b4837b20cb2928d66ca3adc26 348 Pfam PF05975 Bacterial ABC transporter protein EcsB 159 330 1.3E-35 T 22-04-2016 IPR010288 Bacterial ABC transporter EcsB GO:0016021 SII_RS07120 0b26956b4837b20cb2928d66ca3adc26 348 Pfam PF05975 Bacterial ABC transporter protein EcsB 2 158 1.8E-34 T 22-04-2016 IPR010288 Bacterial ABC transporter EcsB GO:0016021 SII_RS07120 0b26956b4837b20cb2928d66ca3adc26 348 PANTHER PTHR41253 1 348 5.7E-28 T 22-04-2016 SII_RS04000 4201d153a738619f91a8fd70a7cb9747 326 Gene3D G3DSA:1.10.260.40 264 318 1.2E-10 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SII_RS04000 4201d153a738619f91a8fd70a7cb9747 326 SMART SM00530 263 318 4.2E-7 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SII_RS04000 4201d153a738619f91a8fd70a7cb9747 326 SUPERFAMILY SSF47413 263 319 4.29E-9 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SII_RS04000 4201d153a738619f91a8fd70a7cb9747 326 Pfam PF01381 Helix-turn-helix 264 318 5.7E-7 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SII_RS04440 1fc4729456f65d359e7acd8b2213a6cb 482 PIRSF PIRSF001021 1 482 1.9E-217 T 22-04-2016 IPR013776 Alpha-amylase, thermostable GO:0004553|GO:0005509|GO:0005975 KEGG: 00500+3.2.1.1 SII_RS04440 1fc4729456f65d359e7acd8b2213a6cb 482 SUPERFAMILY SSF51445 4 376 6.63E-97 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily SII_RS04440 1fc4729456f65d359e7acd8b2213a6cb 482 PANTHER PTHR10357 2 109 7.2E-156 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 SII_RS04440 1fc4729456f65d359e7acd8b2213a6cb 482 PANTHER PTHR10357 131 479 7.2E-156 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 SII_RS04440 1fc4729456f65d359e7acd8b2213a6cb 482 SMART SM00642 4 392 2.1E-65 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 SII_RS04440 1fc4729456f65d359e7acd8b2213a6cb 482 Gene3D G3DSA:2.60.40.1180 399 479 1.1E-31 T 22-04-2016 IPR013780 Glycosyl hydrolase, all-beta SII_RS04440 1fc4729456f65d359e7acd8b2213a6cb 482 Gene3D G3DSA:3.20.20.80 2 398 1.1E-72 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 SII_RS04440 1fc4729456f65d359e7acd8b2213a6cb 482 SUPERFAMILY SSF51011 396 479 6.04E-29 T 22-04-2016 SII_RS04440 1fc4729456f65d359e7acd8b2213a6cb 482 Pfam PF09154 Domain of unknown function (DUF1939) 425 480 5.7E-15 T 22-04-2016 IPR015237 Alpha-amylase C-terminal, prokaryotic GO:0004553 SII_RS04440 1fc4729456f65d359e7acd8b2213a6cb 482 Pfam PF00128 Alpha amylase, catalytic domain 35 375 1.9E-27 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 SII_RS04440 1fc4729456f65d359e7acd8b2213a6cb 482 PANTHER PTHR10357:SF168 2 109 7.2E-156 T 22-04-2016 SII_RS04440 1fc4729456f65d359e7acd8b2213a6cb 482 PANTHER PTHR10357:SF168 131 479 7.2E-156 T 22-04-2016 SII_RS04180 c5e9b2f567937d52bfacc8e26c89140b 599 Pfam PF08275 DNA primase catalytic core, N-terminal domain 133 262 5.2E-36 T 22-04-2016 IPR013264 DNA primase, catalytic core, N-terminal SII_RS04180 c5e9b2f567937d52bfacc8e26c89140b 599 SMART SM00493 269 340 1.1E-15 T 22-04-2016 IPR006171 Toprim domain SII_RS04180 c5e9b2f567937d52bfacc8e26c89140b 599 Gene3D G3DSA:3.40.1360.10 251 369 3.0E-43 T 22-04-2016 SII_RS04180 c5e9b2f567937d52bfacc8e26c89140b 599 SMART SM00400 41 95 9.1E-34 T 22-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 SII_RS04180 c5e9b2f567937d52bfacc8e26c89140b 599 Hamap MF_00974 DNA primase [dnaG]. 9 568 27.448 T 22-04-2016 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 SII_RS04180 c5e9b2f567937d52bfacc8e26c89140b 599 Pfam PF13155 Toprim-like 272 355 1.3E-19 T 22-04-2016 SII_RS04180 c5e9b2f567937d52bfacc8e26c89140b 599 SUPERFAMILY SSF56731 121 432 1.83E-92 T 22-04-2016 SII_RS04180 c5e9b2f567937d52bfacc8e26c89140b 599 Pfam PF01807 CHC2 zinc finger 11 105 1.2E-36 T 22-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 SII_RS04180 c5e9b2f567937d52bfacc8e26c89140b 599 PANTHER PTHR30313 8 568 3.8E-136 T 22-04-2016 SII_RS04180 c5e9b2f567937d52bfacc8e26c89140b 599 TIGRFAM TIGR01391 dnaG: DNA primase 10 423 6.2E-142 T 22-04-2016 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 SII_RS04180 c5e9b2f567937d52bfacc8e26c89140b 599 PIRSF PIRSF002811 8 599 2.9E-173 T 22-04-2016 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 SII_RS04180 c5e9b2f567937d52bfacc8e26c89140b 599 SUPERFAMILY SSF57783 9 104 6.46E-35 T 22-04-2016 SII_RS04180 c5e9b2f567937d52bfacc8e26c89140b 599 Gene3D G3DSA:3.90.580.10 10 106 9.3E-38 T 22-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 SII_RS04180 c5e9b2f567937d52bfacc8e26c89140b 599 Gene3D G3DSA:3.90.980.10 121 250 8.6E-38 T 22-04-2016 IPR013264 DNA primase, catalytic core, N-terminal SII_RS02170 469314a6fd6eed907c69c1785fdeaa7b 101 SUPERFAMILY SSF52794 1 97 3.66E-13 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 SII_RS02170 469314a6fd6eed907c69c1785fdeaa7b 101 Gene3D G3DSA:3.40.50.270 1 79 8.3E-12 T 22-04-2016 SII_RS02170 469314a6fd6eed907c69c1785fdeaa7b 101 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 3 64 3.9E-9 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 SII_RS03285 abcb18072f060cb7e4a88d668813148f 815 SUPERFAMILY SSF52540 409 800 1.18E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS03285 abcb18072f060cb7e4a88d668813148f 815 Gene3D G3DSA:3.40.50.300 638 800 8.3E-23 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS03285 abcb18072f060cb7e4a88d668813148f 815 Gene3D G3DSA:3.40.50.300 469 534 8.3E-23 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS03285 abcb18072f060cb7e4a88d668813148f 815 Pfam PF12846 AAA-like domain 444 805 1.9E-149 T 22-04-2016 SII_RS03285 abcb18072f060cb7e4a88d668813148f 815 PIRSF PIRSF015040 1 815 6.9E-261 T 22-04-2016 IPR016628 ATPase, SAG2001, predicted SII_RS01195 101ba0ad315f21f765d94ac68c2be48c 293 PANTHER PTHR10954:SF12 12 292 1.7E-89 T 22-04-2016 SII_RS01195 101ba0ad315f21f765d94ac68c2be48c 293 PANTHER PTHR10954 12 292 1.7E-89 T 22-04-2016 IPR001352 Ribonuclease HII/HIII GO:0003723|GO:0004523 SII_RS01195 101ba0ad315f21f765d94ac68c2be48c 293 Pfam PF11858 Domain of unknown function (DUF3378) 4 74 4.0E-20 T 22-04-2016 IPR024568 Ribonuclease HIII, N-terminal SII_RS01195 101ba0ad315f21f765d94ac68c2be48c 293 Gene3D G3DSA:3.30.420.10 83 245 2.9E-37 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SII_RS01195 101ba0ad315f21f765d94ac68c2be48c 293 TIGRFAM TIGR00716 rnhC: ribonuclease HIII 12 286 1.1E-50 T 22-04-2016 IPR004641 Ribonuclease HIII GO:0004523|GO:0005737|GO:0016070 SII_RS01195 101ba0ad315f21f765d94ac68c2be48c 293 Pfam PF01351 Ribonuclease HII 84 287 4.4E-59 T 22-04-2016 IPR024567 Ribonuclease HII/HIII domain SII_RS01195 101ba0ad315f21f765d94ac68c2be48c 293 PIRSF PIRSF037748 1 293 1.1E-106 T 22-04-2016 IPR004641 Ribonuclease HIII GO:0004523|GO:0005737|GO:0016070 SII_RS01195 101ba0ad315f21f765d94ac68c2be48c 293 SUPERFAMILY SSF53098 82 291 8.65E-47 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SII_RS01195 101ba0ad315f21f765d94ac68c2be48c 293 Hamap MF_00053 Ribonuclease HIII [rnhC]. 1 293 35.09 T 22-04-2016 IPR004641 Ribonuclease HIII GO:0004523|GO:0005737|GO:0016070 SII_RS08205 8695ba27ac5acc0ee8478e5271c9035d 428 Gene3D G3DSA:3.40.190.10 47 167 3.1E-16 T 22-04-2016 SII_RS08205 8695ba27ac5acc0ee8478e5271c9035d 428 Pfam PF13416 Bacterial extracellular solute-binding protein 57 361 5.9E-29 T 22-04-2016 SII_RS08205 8695ba27ac5acc0ee8478e5271c9035d 428 PANTHER PTHR30061 1 366 7.4E-35 T 22-04-2016 SII_RS08205 8695ba27ac5acc0ee8478e5271c9035d 428 Gene3D G3DSA:3.40.190.10 168 354 1.5E-27 T 22-04-2016 SII_RS08205 8695ba27ac5acc0ee8478e5271c9035d 428 SUPERFAMILY SSF53850 47 373 3.03E-50 T 22-04-2016 SII_RS01895 c01a2b8929e644b8f805514df1a095d9 187 Pfam PF12822 Protein of unknown function (DUF3816) 5 172 2.5E-18 T 22-04-2016 IPR024529 ECF transporter, substrate-specific component GO:0005215 SII_RS01895 c01a2b8929e644b8f805514df1a095d9 187 PANTHER PTHR38438:SF1 1 186 1.4E-51 T 22-04-2016 SII_RS01895 c01a2b8929e644b8f805514df1a095d9 187 PIRSF PIRSF037778 1 187 2.2E-56 T 22-04-2016 IPR025720 ECF transporter, Riboflavin transporter RibU GO:0005886|GO:0032217|GO:0032218 SII_RS01895 c01a2b8929e644b8f805514df1a095d9 187 PANTHER PTHR38438 1 186 1.4E-51 T 22-04-2016 SII_RS08660 09c34318217c26b58dbc4fdbb6117e04 128 Pfam PF01196 Ribosomal protein L17 16 128 2.6E-39 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SII_RS08660 09c34318217c26b58dbc4fdbb6117e04 128 TIGRFAM TIGR00059 L17: ribosomal protein bL17 3 128 1.8E-47 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SII_RS08660 09c34318217c26b58dbc4fdbb6117e04 128 PANTHER PTHR14413 1 67 1.6E-55 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SII_RS08660 09c34318217c26b58dbc4fdbb6117e04 128 PANTHER PTHR14413 84 128 1.6E-55 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SII_RS08660 09c34318217c26b58dbc4fdbb6117e04 128 ProSitePatterns PS01167 Ribosomal protein L17 signature. 30 52 - T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SII_RS08660 09c34318217c26b58dbc4fdbb6117e04 128 Gene3D G3DSA:3.90.1030.10 2 128 3.5E-49 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SII_RS08660 09c34318217c26b58dbc4fdbb6117e04 128 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 1 128 27.541 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SII_RS08660 09c34318217c26b58dbc4fdbb6117e04 128 SUPERFAMILY SSF64263 2 128 2.09E-43 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SII_RS08660 09c34318217c26b58dbc4fdbb6117e04 128 PANTHER PTHR14413:SF5 1 67 1.6E-55 T 22-04-2016 SII_RS08660 09c34318217c26b58dbc4fdbb6117e04 128 PANTHER PTHR14413:SF5 84 128 1.6E-55 T 22-04-2016 SII_RS08395 cf4d014838738940b88175e183dbf31d 399 PIRSF PIRSF000722 1 399 3.0E-148 T 22-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 SII_RS08395 cf4d014838738940b88175e183dbf31d 399 TIGRFAM TIGR00016 ackA: acetate kinase 2 395 6.6E-158 T 22-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 SII_RS08395 cf4d014838738940b88175e183dbf31d 399 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 4 15 - T 22-04-2016 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 SII_RS08395 cf4d014838738940b88175e183dbf31d 399 Hamap MF_00020 Acetate kinase [ackA]. 1 399 184.507 T 22-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 SII_RS08395 cf4d014838738940b88175e183dbf31d 399 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 203 220 - T 22-04-2016 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 SII_RS08395 cf4d014838738940b88175e183dbf31d 399 Gene3D G3DSA:3.30.420.40 205 394 5.4E-78 T 22-04-2016 SII_RS08395 cf4d014838738940b88175e183dbf31d 399 PRINTS PR00471 Acetate kinase family signature 324 340 5.6E-44 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 SII_RS08395 cf4d014838738940b88175e183dbf31d 399 PRINTS PR00471 Acetate kinase family signature 4 15 5.6E-44 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 SII_RS08395 cf4d014838738940b88175e183dbf31d 399 PRINTS PR00471 Acetate kinase family signature 203 224 5.6E-44 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 SII_RS08395 cf4d014838738940b88175e183dbf31d 399 PRINTS PR00471 Acetate kinase family signature 173 186 5.6E-44 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 SII_RS08395 cf4d014838738940b88175e183dbf31d 399 PRINTS PR00471 Acetate kinase family signature 377 389 5.6E-44 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 SII_RS08395 cf4d014838738940b88175e183dbf31d 399 PRINTS PR00471 Acetate kinase family signature 302 315 5.6E-44 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 SII_RS08395 cf4d014838738940b88175e183dbf31d 399 SUPERFAMILY SSF53067 157 396 2.59E-88 T 22-04-2016 SII_RS08395 cf4d014838738940b88175e183dbf31d 399 Pfam PF00871 Acetokinase family 5 390 3.7E-149 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 SII_RS08395 cf4d014838738940b88175e183dbf31d 399 PANTHER PTHR21060 1 394 1.2E-205 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 SII_RS08395 cf4d014838738940b88175e183dbf31d 399 PANTHER PTHR21060:SF11 1 394 1.2E-205 T 22-04-2016 SII_RS08395 cf4d014838738940b88175e183dbf31d 399 SUPERFAMILY SSF53067 1 196 5.96E-63 T 22-04-2016 SII_RS08395 cf4d014838738940b88175e183dbf31d 399 Gene3D G3DSA:3.30.420.40 5 204 1.5E-9 T 22-04-2016 SII_RS04855 f67968f8c4c2edf4afec2af1017d5542 197 PANTHER PTHR21047 2 192 1.6E-42 T 22-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 SII_RS04855 f67968f8c4c2edf4afec2af1017d5542 197 Gene3D G3DSA:2.60.120.10 16 192 3.9E-54 T 22-04-2016 IPR014710 RmlC-like jelly roll fold SII_RS04855 f67968f8c4c2edf4afec2af1017d5542 197 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 17 188 2.3E-39 T 22-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 SII_RS04855 f67968f8c4c2edf4afec2af1017d5542 197 SUPERFAMILY SSF51182 17 191 9.19E-52 T 22-04-2016 IPR011051 RmlC-like cupin domain SII_RS04855 f67968f8c4c2edf4afec2af1017d5542 197 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 11 195 7.0E-100 T 22-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 SII_RS00415 45ddf830ec11aced6032fac875ba78eb 271 PANTHER PTHR33393:SF5 40 266 5.8E-27 T 22-04-2016 SII_RS00415 45ddf830ec11aced6032fac875ba78eb 271 PANTHER PTHR33393 40 266 5.8E-27 T 22-04-2016 SII_RS00415 45ddf830ec11aced6032fac875ba78eb 271 SUPERFAMILY SSF63817 91 227 8.37E-46 T 22-04-2016 IPR023365 Sortase domain SII_RS00415 45ddf830ec11aced6032fac875ba78eb 271 Gene3D G3DSA:2.40.260.10 90 227 1.7E-51 T 22-04-2016 IPR023365 Sortase domain SII_RS00415 45ddf830ec11aced6032fac875ba78eb 271 Pfam PF04203 Sortase family 101 226 2.9E-25 T 22-04-2016 IPR005754 Sortase family SII_RS00415 45ddf830ec11aced6032fac875ba78eb 271 TIGRFAM TIGR01076 sortase_fam: sortase 99 230 3.7E-50 T 22-04-2016 IPR005754 Sortase family SII_RS05120 a2a5a8c73e7334e8fc4884f41b33fc94 568 PANTHER PTHR11390 1 563 7.6E-149 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 SII_RS05120 a2a5a8c73e7334e8fc4884f41b33fc94 568 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 289 303 - T 22-04-2016 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 SII_RS05120 a2a5a8c73e7334e8fc4884f41b33fc94 568 Pfam PF01751 Toprim domain 3 132 9.2E-14 T 22-04-2016 IPR006171 Toprim domain SII_RS05120 a2a5a8c73e7334e8fc4884f41b33fc94 568 Gene3D G3DSA:3.40.50.140 1 151 5.4E-51 T 22-04-2016 IPR006171 Toprim domain SII_RS05120 a2a5a8c73e7334e8fc4884f41b33fc94 568 SMART SM00437 252 518 2.5E-66 T 22-04-2016 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 SII_RS05120 a2a5a8c73e7334e8fc4884f41b33fc94 568 SUPERFAMILY SSF56712 1 563 1.24E-164 T 22-04-2016 IPR023405 DNA topoisomerase, type IA, core domain SII_RS05120 a2a5a8c73e7334e8fc4884f41b33fc94 568 Pfam PF01131 DNA topoisomerase 151 552 1.5E-118 T 22-04-2016 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 SII_RS05120 a2a5a8c73e7334e8fc4884f41b33fc94 568 TIGRFAM TIGR01056 topB: DNA topoisomerase III 1 563 2.5E-168 T 22-04-2016 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 SII_RS05120 a2a5a8c73e7334e8fc4884f41b33fc94 568 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 184 202 3.9E-21 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 SII_RS05120 a2a5a8c73e7334e8fc4884f41b33fc94 568 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 481 495 3.9E-21 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 SII_RS05120 a2a5a8c73e7334e8fc4884f41b33fc94 568 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 294 303 3.9E-21 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 SII_RS05120 a2a5a8c73e7334e8fc4884f41b33fc94 568 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 98 111 3.9E-21 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 SII_RS05120 a2a5a8c73e7334e8fc4884f41b33fc94 568 SMART SM00493 1 124 1.3E-22 T 22-04-2016 IPR006171 Toprim domain SII_RS05120 a2a5a8c73e7334e8fc4884f41b33fc94 568 Gene3D G3DSA:2.70.20.10 229 312 6.1E-15 T 22-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 SII_RS05120 a2a5a8c73e7334e8fc4884f41b33fc94 568 Gene3D G3DSA:2.70.20.10 330 444 5.1E-31 T 22-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 SII_RS05120 a2a5a8c73e7334e8fc4884f41b33fc94 568 Gene3D G3DSA:1.10.460.10 153 208 1.1E-57 T 22-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 SII_RS05120 a2a5a8c73e7334e8fc4884f41b33fc94 568 Gene3D G3DSA:1.10.460.10 445 563 1.1E-57 T 22-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 SII_RS05120 a2a5a8c73e7334e8fc4884f41b33fc94 568 SMART SM00436 124 214 7.1E-36 T 22-04-2016 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 SII_RS04780 bb5e637ce8bec1f5824ae3dda2b1b06e 264 Gene3D G3DSA:3.40.50.1000 180 262 4.7E-39 T 22-04-2016 IPR023214 HAD-like domain SII_RS04780 bb5e637ce8bec1f5824ae3dda2b1b06e 264 Gene3D G3DSA:3.40.50.1000 1 74 4.7E-39 T 22-04-2016 IPR023214 HAD-like domain SII_RS04780 bb5e637ce8bec1f5824ae3dda2b1b06e 264 PANTHER PTHR10000 1 262 5.6E-90 T 22-04-2016 SII_RS04780 bb5e637ce8bec1f5824ae3dda2b1b06e 264 SUPERFAMILY SSF56784 1 262 2.6E-57 T 22-04-2016 IPR023214 HAD-like domain SII_RS04780 bb5e637ce8bec1f5824ae3dda2b1b06e 264 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 233 2.2E-23 T 22-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 SII_RS04780 bb5e637ce8bec1f5824ae3dda2b1b06e 264 Gene3D G3DSA:3.30.1240.10 83 179 1.9E-26 T 22-04-2016 SII_RS04780 bb5e637ce8bec1f5824ae3dda2b1b06e 264 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 260 3.0E-43 T 22-04-2016 IPR000150 Cof protein GO:0016787 SII_RS04780 bb5e637ce8bec1f5824ae3dda2b1b06e 264 PANTHER PTHR10000:SF27 1 262 5.6E-90 T 22-04-2016 SII_RS04780 bb5e637ce8bec1f5824ae3dda2b1b06e 264 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 260 8.6E-48 T 22-04-2016 IPR023214 HAD-like domain SII_RS04780 bb5e637ce8bec1f5824ae3dda2b1b06e 264 ProSitePatterns PS01229 Hypothetical cof family signature 2. 215 237 - T 22-04-2016 SII_RS05995 4fad02902a7263c87858bfaf491342d8 334 Pfam PF13310 Virulence protein RhuM family 66 311 6.9E-103 T 22-04-2016 IPR011204 Virulence protein RhuM-like SII_RS05995 4fad02902a7263c87858bfaf491342d8 334 PANTHER PTHR35810 1 331 5.1E-139 T 22-04-2016 SII_RS05995 4fad02902a7263c87858bfaf491342d8 334 Gene3D G3DSA:1.10.10.10 17 55 5.3E-4 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SII_RS05995 4fad02902a7263c87858bfaf491342d8 334 PIRSF PIRSF015268 1 334 1.5E-134 T 22-04-2016 IPR011204 Virulence protein RhuM-like SII_RS05995 4fad02902a7263c87858bfaf491342d8 334 PANTHER PTHR35810:SF1 1 331 5.1E-139 T 22-04-2016 SII_RS02335 eafe8ca442721c51eb995a6f68077fe3 1090 Pfam PF12705 PD-(D/E)XK nuclease superfamily 747 1033 2.7E-27 T 22-04-2016 SII_RS02335 eafe8ca442721c51eb995a6f68077fe3 1090 PANTHER PTHR30591:SF1 5 1090 2.7E-116 T 22-04-2016 SII_RS02335 eafe8ca442721c51eb995a6f68077fe3 1090 TIGRFAM TIGR02774 rexB_recomb: ATP-dependent nuclease subunit B 2 1080 0.0 T 22-04-2016 IPR014141 DNA helicase subunit RexB GO:0016788|GO:0016817 SII_RS02335 eafe8ca442721c51eb995a6f68077fe3 1090 PANTHER PTHR30591 5 1090 2.7E-116 T 22-04-2016 SII_RS02335 eafe8ca442721c51eb995a6f68077fe3 1090 Gene3D G3DSA:3.40.50.300 251 355 4.2E-9 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS02335 eafe8ca442721c51eb995a6f68077fe3 1090 Hamap MF_01453 ATP-dependent helicase/deoxyribonuclease subunit B [rexB]. 1 1090 39.415 T 22-04-2016 IPR014141 DNA helicase subunit RexB GO:0016788|GO:0016817 SII_RS02335 eafe8ca442721c51eb995a6f68077fe3 1090 SUPERFAMILY SSF52540 291 650 2.44E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS02335 eafe8ca442721c51eb995a6f68077fe3 1090 SUPERFAMILY SSF52980 746 931 4.02E-7 T 22-04-2016 IPR011335 Restriction endonuclease type II-like SII_RS03625 01adfaae13ed2f5182340da728a37495 356 Pfam PF02562 PhoH-like protein 111 314 2.0E-95 T 22-04-2016 IPR003714 PhoH-like protein GO:0005524 SII_RS03625 01adfaae13ed2f5182340da728a37495 356 Gene3D G3DSA:3.40.50.300 109 314 5.0E-89 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS03625 01adfaae13ed2f5182340da728a37495 356 PANTHER PTHR30473 4 337 5.1E-168 T 22-04-2016 SII_RS03625 01adfaae13ed2f5182340da728a37495 356 SUPERFAMILY SSF52540 110 286 1.54E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS03625 01adfaae13ed2f5182340da728a37495 356 PANTHER PTHR30473:SF1 4 337 5.1E-168 T 22-04-2016 SII_RS02245 c6557cab75b3e8aa16228633bc71608d 392 Pfam PF01594 Domain of unknown function DUF20 34 366 1.4E-74 T 22-04-2016 IPR002549 Transmembrane protein TqsA-like SII_RS02245 c6557cab75b3e8aa16228633bc71608d 392 PANTHER PTHR21716 44 388 1.3E-80 T 22-04-2016 IPR002549 Transmembrane protein TqsA-like SII_RS02245 c6557cab75b3e8aa16228633bc71608d 392 PANTHER PTHR21716 8 28 1.3E-80 T 22-04-2016 IPR002549 Transmembrane protein TqsA-like SII_RS07405 dfa1d39eb7edc7d53b4789ded58b4556 488 Hamap MF_00120 Glutamyl-tRNA(Gln) amidotransferase subunit A [gatA]. 11 475 89.691 T 22-04-2016 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 SII_RS07405 dfa1d39eb7edc7d53b4789ded58b4556 488 PANTHER PTHR11895:SF7 2 481 2.9E-215 T 22-04-2016 SII_RS07405 dfa1d39eb7edc7d53b4789ded58b4556 488 PANTHER PTHR11895 2 481 2.9E-215 T 22-04-2016 IPR000120 Amidase GO:0016884 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 SII_RS07405 dfa1d39eb7edc7d53b4789ded58b4556 488 Pfam PF01425 Amidase 24 463 5.8E-150 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 SII_RS07405 dfa1d39eb7edc7d53b4789ded58b4556 488 SUPERFAMILY SSF75304 2 481 1.14E-154 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 SII_RS07405 dfa1d39eb7edc7d53b4789ded58b4556 488 ProSitePatterns PS00571 Amidases signature. 150 181 - T 22-04-2016 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 SII_RS07405 dfa1d39eb7edc7d53b4789ded58b4556 488 TIGRFAM TIGR00132 gatA: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit 12 475 1.2E-187 T 22-04-2016 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 SII_RS07405 dfa1d39eb7edc7d53b4789ded58b4556 488 Gene3D G3DSA:3.90.1300.10 3 482 1.3E-168 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 SII_RS05525 afe2394a4bdea78de15201b8f2ea39f2 627 Gene3D G3DSA:3.20.20.80 74 402 1.1E-27 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 SII_RS05525 afe2394a4bdea78de15201b8f2ea39f2 627 Pfam PF00728 Glycosyl hydrolase family 20, catalytic domain 90 311 4.2E-5 T 22-04-2016 IPR015883 Glycoside hydrolase family 20, catalytic domain GO:0004553|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 SII_RS05525 afe2394a4bdea78de15201b8f2ea39f2 627 PANTHER PTHR21040:SF7 1 598 4.6E-292 T 22-04-2016 SII_RS05525 afe2394a4bdea78de15201b8f2ea39f2 627 PANTHER PTHR21040 1 598 4.6E-292 T 22-04-2016 SII_RS05525 afe2394a4bdea78de15201b8f2ea39f2 627 SUPERFAMILY SSF51445 88 402 2.57E-43 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily SII_RS02485 8737ffb3930d61d43effbb809fbe3de6 847 SUPERFAMILY SSF55486 200 448 1.26E-80 T 22-04-2016 SII_RS02485 8737ffb3930d61d43effbb809fbe3de6 847 PANTHER PTHR11533:SF163 9 847 2.1E-273 T 22-04-2016 SII_RS02485 8737ffb3930d61d43effbb809fbe3de6 847 SUPERFAMILY SSF63737 10 192 2.48E-45 T 22-04-2016 SII_RS02485 8737ffb3930d61d43effbb809fbe3de6 847 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 126 141 7.9E-29 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 SII_RS02485 8737ffb3930d61d43effbb809fbe3de6 847 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 175 190 7.9E-29 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 SII_RS02485 8737ffb3930d61d43effbb809fbe3de6 847 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 308 320 7.9E-29 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 SII_RS02485 8737ffb3930d61d43effbb809fbe3de6 847 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 254 264 7.9E-29 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 SII_RS02485 8737ffb3930d61d43effbb809fbe3de6 847 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 289 304 7.9E-29 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 SII_RS02485 8737ffb3930d61d43effbb809fbe3de6 847 Pfam PF11838 ERAP1-like C-terminal domain 512 825 5.4E-40 T 22-04-2016 IPR024571 ERAP1-like C-terminal domain SII_RS02485 8737ffb3930d61d43effbb809fbe3de6 847 PANTHER PTHR11533 9 847 2.1E-273 T 22-04-2016 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase GO:0006508 SII_RS02485 8737ffb3930d61d43effbb809fbe3de6 847 Pfam PF01433 Peptidase family M1 8 382 2.4E-129 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 SII_RS02485 8737ffb3930d61d43effbb809fbe3de6 847 Gene3D G3DSA:1.10.390.10 302 449 1.4E-48 T 22-04-2016 SII_RS02410 43057ee93904e55f21cacdc5385b1b84 426 PANTHER PTHR21090 1 426 9.9E-265 T 22-04-2016 SII_RS02410 43057ee93904e55f21cacdc5385b1b84 426 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 419 9.2E-164 T 22-04-2016 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SII_RS02410 43057ee93904e55f21cacdc5385b1b84 426 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 420 44.692 T 22-04-2016 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SII_RS02410 43057ee93904e55f21cacdc5385b1b84 426 Gene3D G3DSA:3.65.10.10 224 421 1.0E-55 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 SII_RS02410 43057ee93904e55f21cacdc5385b1b84 426 PANTHER PTHR21090:SF19 1 426 9.9E-265 T 22-04-2016 SII_RS02410 43057ee93904e55f21cacdc5385b1b84 426 Gene3D G3DSA:3.65.10.10 22 223 8.6E-65 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 SII_RS02410 43057ee93904e55f21cacdc5385b1b84 426 SUPERFAMILY SSF55205 1 422 6.7E-133 T 22-04-2016 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 SII_RS02410 43057ee93904e55f21cacdc5385b1b84 426 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 10 410 4.9E-105 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 SII_RS06600 6d57908e5484e241e0607e6827ffbfdb 882 Pfam PF08264 Anticodon-binding domain of tRNA 610 754 5.7E-41 T 22-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 SII_RS06600 6d57908e5484e241e0607e6827ffbfdb 882 SUPERFAMILY SSF52374 6 195 8.02E-138 T 22-04-2016 SII_RS06600 6d57908e5484e241e0607e6827ffbfdb 882 SUPERFAMILY SSF52374 343 570 8.02E-138 T 22-04-2016 SII_RS06600 6d57908e5484e241e0607e6827ffbfdb 882 Gene3D G3DSA:1.10.730.10 560 745 3.1E-56 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SII_RS06600 6d57908e5484e241e0607e6827ffbfdb 882 SUPERFAMILY SSF46589 814 878 6.8E-15 T 22-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 SII_RS06600 6d57908e5484e241e0607e6827ffbfdb 882 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 814 878 2.0E-15 T 22-04-2016 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 SII_RS06600 6d57908e5484e241e0607e6827ffbfdb 882 PANTHER PTHR11946:SF5 1 790 0.0 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 SII_RS06600 6d57908e5484e241e0607e6827ffbfdb 882 PANTHER PTHR11946:SF5 810 872 0.0 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 SII_RS06600 6d57908e5484e241e0607e6827ffbfdb 882 Gene3D G3DSA:1.10.287.380 807 877 1.7E-4 T 22-04-2016 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 SII_RS06600 6d57908e5484e241e0607e6827ffbfdb 882 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 18 560 5.1E-214 T 22-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SII_RS06600 6d57908e5484e241e0607e6827ffbfdb 882 SUPERFAMILY SSF47323 571 827 6.54E-65 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SII_RS06600 6d57908e5484e241e0607e6827ffbfdb 882 Gene3D G3DSA:3.90.740.10 197 338 3.8E-50 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 SII_RS06600 6d57908e5484e241e0607e6827ffbfdb 882 SUPERFAMILY SSF50677 193 344 1.7E-61 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 SII_RS06600 6d57908e5484e241e0607e6827ffbfdb 882 Gene3D G3DSA:3.40.50.620 8 196 2.2E-137 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SII_RS06600 6d57908e5484e241e0607e6827ffbfdb 882 Gene3D G3DSA:3.40.50.620 343 559 2.2E-137 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SII_RS06600 6d57908e5484e241e0607e6827ffbfdb 882 TIGRFAM TIGR00422 valS: valine--tRNA ligase 7 861 0.0 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 SII_RS06600 6d57908e5484e241e0607e6827ffbfdb 882 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 46 57 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SII_RS06600 6d57908e5484e241e0607e6827ffbfdb 882 PANTHER PTHR11946 1 790 0.0 T 22-04-2016 SII_RS06600 6d57908e5484e241e0607e6827ffbfdb 882 PANTHER PTHR11946 810 872 0.0 T 22-04-2016 SII_RS06600 6d57908e5484e241e0607e6827ffbfdb 882 Hamap MF_02004 Valine--tRNA ligase [valS]. 5 879 15.706 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 SII_RS06600 6d57908e5484e241e0607e6827ffbfdb 882 PRINTS PR00986 Valyl-tRNA synthetase signature 472 490 3.0E-36 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 SII_RS06600 6d57908e5484e241e0607e6827ffbfdb 882 PRINTS PR00986 Valyl-tRNA synthetase signature 233 250 3.0E-36 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 SII_RS06600 6d57908e5484e241e0607e6827ffbfdb 882 PRINTS PR00986 Valyl-tRNA synthetase signature 348 361 3.0E-36 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 SII_RS06600 6d57908e5484e241e0607e6827ffbfdb 882 PRINTS PR00986 Valyl-tRNA synthetase signature 39 50 3.0E-36 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 SII_RS06600 6d57908e5484e241e0607e6827ffbfdb 882 PRINTS PR00986 Valyl-tRNA synthetase signature 440 461 3.0E-36 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 SII_RS05990 e22ea5a4bca4fd2aabb8f38a5ba90533 373 SUPERFAMILY SSF116734 12 182 3.76E-45 T 22-04-2016 SII_RS05990 e22ea5a4bca4fd2aabb8f38a5ba90533 373 Pfam PF01420 Type I restriction modification DNA specificity domain 191 339 1.0E-21 T 22-04-2016 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 SII_RS05990 e22ea5a4bca4fd2aabb8f38a5ba90533 373 Pfam PF01420 Type I restriction modification DNA specificity domain 11 163 2.9E-31 T 22-04-2016 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 SII_RS05990 e22ea5a4bca4fd2aabb8f38a5ba90533 373 SUPERFAMILY SSF116734 187 355 3.11E-31 T 22-04-2016 SII_RS03515 367f26daf6cb5c0c8a429f3474f35ab4 554 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 238 352 1.2E-9 T 22-04-2016 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 SII_RS03515 367f26daf6cb5c0c8a429f3474f35ab4 554 SUPERFAMILY SSF48019 249 352 5.7E-13 T 22-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 SII_RS03515 367f26daf6cb5c0c8a429f3474f35ab4 554 SMART SM00382 36 176 5.1E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain SII_RS03515 367f26daf6cb5c0c8a429f3474f35ab4 554 Gene3D G3DSA:1.20.272.10 248 351 1.6E-7 T 22-04-2016 SII_RS03515 367f26daf6cb5c0c8a429f3474f35ab4 554 Gene3D G3DSA:3.40.50.300 15 165 8.5E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS03515 367f26daf6cb5c0c8a429f3474f35ab4 554 SUPERFAMILY SSF52540 33 223 2.02E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS03515 367f26daf6cb5c0c8a429f3474f35ab4 554 Pfam PF13177 DNA polymerase III, delta subunit 19 177 2.0E-44 T 22-04-2016 SII_RS03515 367f26daf6cb5c0c8a429f3474f35ab4 554 PANTHER PTHR11669 1 504 2.1E-181 T 22-04-2016 SII_RS03515 367f26daf6cb5c0c8a429f3474f35ab4 554 Gene3D G3DSA:1.10.8.60 166 242 1.0E-29 T 22-04-2016 SII_RS03515 367f26daf6cb5c0c8a429f3474f35ab4 554 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 40 58 7.2E-6 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 SII_RS03515 367f26daf6cb5c0c8a429f3474f35ab4 554 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 123 141 7.2E-6 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 SII_RS03515 367f26daf6cb5c0c8a429f3474f35ab4 554 PANTHER PTHR11669:SF0 1 504 2.1E-181 T 22-04-2016 SII_RS03515 367f26daf6cb5c0c8a429f3474f35ab4 554 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 2 350 1.1E-135 T 22-04-2016 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 SII_RS03595 4cbb174e89e1b052c2cc72a72a8e16a7 268 Gene3D G3DSA:2.40.30.10 13 107 7.0E-29 T 22-04-2016 SII_RS03595 4cbb174e89e1b052c2cc72a72a8e16a7 268 PANTHER PTHR19370 13 256 1.0E-57 T 22-04-2016 SII_RS03595 4cbb174e89e1b052c2cc72a72a8e16a7 268 PIRSF PIRSF006816 12 268 8.1E-68 T 22-04-2016 IPR012165 Cytochrome-c3 hydrogenase, gamma subunit GO:0006221|GO:0050660|GO:0051537 UniPathway: UPA00070 SII_RS03595 4cbb174e89e1b052c2cc72a72a8e16a7 268 Hamap MF_01211 Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit [pyrK]. 15 268 34.838 T 22-04-2016 IPR023455 Dihydroorotate dehydrogenase electron transfer subunit UniPathway: UPA00070 SII_RS03595 4cbb174e89e1b052c2cc72a72a8e16a7 268 SUPERFAMILY SSF63380 14 109 2.33E-20 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 SII_RS03595 4cbb174e89e1b052c2cc72a72a8e16a7 268 PANTHER PTHR19370:SF68 13 256 1.0E-57 T 22-04-2016 SII_RS03595 4cbb174e89e1b052c2cc72a72a8e16a7 268 SUPERFAMILY SSF52343 104 266 4.32E-34 T 22-04-2016 SII_RS03595 4cbb174e89e1b052c2cc72a72a8e16a7 268 Pfam PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B 226 266 1.5E-16 T 22-04-2016 IPR019480 Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain UniPathway: UPA00070 SII_RS03595 4cbb174e89e1b052c2cc72a72a8e16a7 268 Pfam PF00175 Oxidoreductase NAD-binding domain 123 212 2.4E-7 T 22-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 SII_RS03595 4cbb174e89e1b052c2cc72a72a8e16a7 268 Gene3D G3DSA:2.10.240.10 226 267 2.3E-16 T 22-04-2016 IPR019480 Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain UniPathway: UPA00070 SII_RS03595 4cbb174e89e1b052c2cc72a72a8e16a7 268 Gene3D G3DSA:3.40.50.80 118 216 1.4E-34 T 22-04-2016 SII_RS07110 c4653f1f78095cd1eb7fd1d1f0b68c3c 211 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 25 208 1.4E-55 T 22-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 SII_RS07110 c4653f1f78095cd1eb7fd1d1f0b68c3c 211 SUPERFAMILY SSF53335 8 207 7.26E-32 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SII_RS07110 c4653f1f78095cd1eb7fd1d1f0b68c3c 211 PANTHER PTHR23417:SF14 1 209 2.0E-61 T 22-04-2016 SII_RS07110 c4653f1f78095cd1eb7fd1d1f0b68c3c 211 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 1 210 27.574 T 22-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 SII_RS07110 c4653f1f78095cd1eb7fd1d1f0b68c3c 211 Pfam PF02390 Putative methyltransferase 40 206 2.8E-45 T 22-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 SII_RS07110 c4653f1f78095cd1eb7fd1d1f0b68c3c 211 PANTHER PTHR23417 1 209 2.0E-61 T 22-04-2016 SII_RS07110 c4653f1f78095cd1eb7fd1d1f0b68c3c 211 Gene3D G3DSA:3.40.50.150 43 173 4.0E-11 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SII_RS01025 a67e72739e4ca39c6e037bd90cda7574 76 Hamap MF_01553 UPF0356 protein . 1 76 21.474 T 22-04-2016 IPR009907 Protein of unknown function DUF1447 SII_RS01025 a67e72739e4ca39c6e037bd90cda7574 76 ProDom PD055417 UPF0356 TRANSCRIPTIONAL REGULATOR SP0122 SH1862 BLI01669/BL01628 MW0973 LMOF2365_1049 BCE33L3734 SPYM3_1619/SPS0248 1 75 4.0E-27 T 22-04-2016 IPR009907 Protein of unknown function DUF1447 SII_RS01025 a67e72739e4ca39c6e037bd90cda7574 76 PANTHER PTHR41306 2 76 3.4E-20 T 22-04-2016 IPR009907 Protein of unknown function DUF1447 SII_RS01025 a67e72739e4ca39c6e037bd90cda7574 76 Pfam PF07288 Protein of unknown function (DUF1447) 2 75 9.9E-31 T 22-04-2016 IPR009907 Protein of unknown function DUF1447 SII_RS09400 a3fda776ef3b0d182c71df803729abe3 373 Gene3D G3DSA:2.30.30.280 214 281 1.1E-31 T 22-04-2016 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 SII_RS09400 a3fda776ef3b0d182c71df803729abe3 373 Gene3D G3DSA:3.40.50.620 4 212 2.0E-104 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SII_RS09400 a3fda776ef3b0d182c71df803729abe3 373 PANTHER PTHR11933 1 366 4.2E-209 T 22-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 SII_RS09400 a3fda776ef3b0d182c71df803729abe3 373 SUPERFAMILY SSF52402 8 244 1.76E-58 T 22-04-2016 SII_RS09400 a3fda776ef3b0d182c71df803729abe3 373 PANTHER PTHR11933:SF10 1 366 4.2E-209 T 22-04-2016 SII_RS09400 a3fda776ef3b0d182c71df803729abe3 373 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 8 360 1.6E-135 T 22-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 SII_RS09400 a3fda776ef3b0d182c71df803729abe3 373 Pfam PF03054 tRNA methyl transferase 8 360 1.1E-145 T 22-04-2016 SII_RS09400 a3fda776ef3b0d182c71df803729abe3 373 Gene3D G3DSA:2.40.30.10 283 369 2.8E-31 T 22-04-2016 SII_RS09400 a3fda776ef3b0d182c71df803729abe3 373 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 7 361 41.048 T 22-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 SII_RS05775 b38e9746dde52f1fa0546c0d663c2b3c 312 SUPERFAMILY SSF54534 143 240 2.06E-13 T 22-04-2016 SII_RS05775 b38e9746dde52f1fa0546c0d663c2b3c 312 PANTHER PTHR10657 10 305 6.7E-28 T 22-04-2016 SII_RS05775 b38e9746dde52f1fa0546c0d663c2b3c 312 SUPERFAMILY SSF109998 27 172 7.45E-19 T 22-04-2016 IPR027304 Trigger factor/SurA domain SII_RS05775 b38e9746dde52f1fa0546c0d663c2b3c 312 Pfam PF13145 PPIC-type PPIASE domain 130 243 9.7E-15 T 22-04-2016 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 SII_RS05775 b38e9746dde52f1fa0546c0d663c2b3c 312 Gene3D G3DSA:3.10.50.40 140 263 1.1E-19 T 22-04-2016 SII_RS05775 b38e9746dde52f1fa0546c0d663c2b3c 312 Hamap MF_01145 Foldase protein PrsA [prsA]. 3 297 20.46 T 22-04-2016 IPR023059 Foldase protein PrsA GO:0003755 SII_RS05775 b38e9746dde52f1fa0546c0d663c2b3c 312 PANTHER PTHR10657:SF11 10 305 6.7E-28 T 22-04-2016 SII_RS08095 33a5d958116a3f8ff58f0de2c14aa5e4 239 SUPERFAMILY SSF52540 2 217 1.31E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS08095 33a5d958116a3f8ff58f0de2c14aa5e4 239 PANTHER PTHR24220 3 233 8.6E-108 T 22-04-2016 SII_RS08095 33a5d958116a3f8ff58f0de2c14aa5e4 239 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SII_RS08095 33a5d958116a3f8ff58f0de2c14aa5e4 239 PANTHER PTHR24220:SF581 3 233 8.6E-108 T 22-04-2016 SII_RS08095 33a5d958116a3f8ff58f0de2c14aa5e4 239 Pfam PF00005 ABC transporter 17 161 1.3E-23 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SII_RS08095 33a5d958116a3f8ff58f0de2c14aa5e4 239 Gene3D G3DSA:3.40.50.300 1 229 1.1E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS08095 33a5d958116a3f8ff58f0de2c14aa5e4 239 SMART SM00382 26 210 8.1E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain SII_RS02855 d89004478a6b133c165184f42e03d7fd 217 PANTHER PTHR34070 3 217 1.6E-59 T 22-04-2016 SII_RS02855 d89004478a6b133c165184f42e03d7fd 217 Pfam PF08713 DNA alkylation repair enzyme 8 217 1.6E-65 T 22-04-2016 IPR014825 DNA alkylation repair enzyme SII_RS02855 d89004478a6b133c165184f42e03d7fd 217 PANTHER PTHR34070:SF1 3 217 1.6E-59 T 22-04-2016 SII_RS02855 d89004478a6b133c165184f42e03d7fd 217 Gene3D G3DSA:1.25.40.290 123 217 1.5E-38 T 22-04-2016 SII_RS02855 d89004478a6b133c165184f42e03d7fd 217 SUPERFAMILY SSF48371 9 217 5.76E-51 T 22-04-2016 IPR016024 Armadillo-type fold GO:0005488 SII_RS07105 a02b9526b90a9ad62c2befd3dc4e9cfd 230 PANTHER PTHR31851 10 228 9.8E-59 T 22-04-2016 SII_RS07105 a02b9526b90a9ad62c2befd3dc4e9cfd 230 Pfam PF01988 VIT family 18 225 9.5E-49 T 22-04-2016 IPR008217 Ccc1 family SII_RS03030 b5eb2f01b2fc6250e988eca7cec09ce5 66 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 64 17.699 T 22-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 SII_RS03030 b5eb2f01b2fc6250e988eca7cec09ce5 66 PANTHER PTHR33343 1 66 2.9E-23 T 22-04-2016 SII_RS03030 b5eb2f01b2fc6250e988eca7cec09ce5 66 SUPERFAMILY SSF143034 2 62 1.15E-19 T 22-04-2016 SII_RS03030 b5eb2f01b2fc6250e988eca7cec09ce5 66 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 62 3.6E-22 T 22-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 SII_RS03030 b5eb2f01b2fc6250e988eca7cec09ce5 66 Pfam PF01632 Ribosomal protein L35 2 62 2.7E-21 T 22-04-2016 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SII_RS03030 b5eb2f01b2fc6250e988eca7cec09ce5 66 PRINTS PR00064 Ribosomal protein L35 signature 3 20 5.0E-17 T 22-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 SII_RS03030 b5eb2f01b2fc6250e988eca7cec09ce5 66 PRINTS PR00064 Ribosomal protein L35 signature 36 54 5.0E-17 T 22-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 SII_RS03030 b5eb2f01b2fc6250e988eca7cec09ce5 66 PRINTS PR00064 Ribosomal protein L35 signature 21 35 5.0E-17 T 22-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 SII_RS03030 b5eb2f01b2fc6250e988eca7cec09ce5 66 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 31 - T 22-04-2016 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SII_RS03325 77466d4d2ff86830c729d7f4e3bb9634 405 SUPERFAMILY SSF54171 3 73 7.19E-38 T 22-04-2016 IPR016177 DNA-binding domain GO:0003677 SII_RS03325 77466d4d2ff86830c729d7f4e3bb9634 405 Gene3D G3DSA:3.30.160.60 3 71 1.1E-35 T 22-04-2016 IPR013087 Zinc finger C2H2-type/integrase DNA-binding domain GO:0003676 SII_RS03325 77466d4d2ff86830c729d7f4e3bb9634 405 Pfam PF00589 Phage integrase family 190 383 4.5E-48 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 SII_RS03325 77466d4d2ff86830c729d7f4e3bb9634 405 PANTHER PTHR30349:SF20 84 402 2.1E-43 T 22-04-2016 SII_RS03325 77466d4d2ff86830c729d7f4e3bb9634 405 PANTHER PTHR30349 84 402 2.1E-43 T 22-04-2016 SII_RS03325 77466d4d2ff86830c729d7f4e3bb9634 405 Pfam PF02920 DNA binding domain of tn916 integrase 1 71 1.5E-27 T 22-04-2016 SII_RS03325 77466d4d2ff86830c729d7f4e3bb9634 405 Gene3D G3DSA:1.10.150.130 94 173 1.0E-6 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal SII_RS03325 77466d4d2ff86830c729d7f4e3bb9634 405 SUPERFAMILY SSF56349 86 389 1.09E-51 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 SII_RS03325 77466d4d2ff86830c729d7f4e3bb9634 405 Gene3D G3DSA:1.10.443.10 190 387 1.6E-39 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 SII_RS02115 25ae254a5f69473fff551adad68f0fc4 135 SUPERFAMILY SSF47413 1 67 4.61E-19 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SII_RS02115 25ae254a5f69473fff551adad68f0fc4 135 Pfam PF01381 Helix-turn-helix 7 61 1.6E-14 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SII_RS02115 25ae254a5f69473fff551adad68f0fc4 135 PANTHER PTHR10245:SF47 1 70 2.9E-21 T 22-04-2016 SII_RS02115 25ae254a5f69473fff551adad68f0fc4 135 SMART SM00530 6 61 1.1E-13 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SII_RS02115 25ae254a5f69473fff551adad68f0fc4 135 Gene3D G3DSA:1.10.260.40 1 65 4.6E-25 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SII_RS02115 25ae254a5f69473fff551adad68f0fc4 135 PANTHER PTHR10245 1 70 2.9E-21 T 22-04-2016 SII_RS04485 e49f30c59c33bfca9490b2b3b1caac89 362 Gene3D G3DSA:3.40.50.880 153 354 5.7E-65 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like SII_RS04485 e49f30c59c33bfca9490b2b3b1caac89 362 PRINTS PR00096 Glutamine amidotransferase superfamily signature 215 224 7.8E-12 T 22-04-2016 SII_RS04485 e49f30c59c33bfca9490b2b3b1caac89 362 PRINTS PR00096 Glutamine amidotransferase superfamily signature 327 340 7.8E-12 T 22-04-2016 SII_RS04485 e49f30c59c33bfca9490b2b3b1caac89 362 PRINTS PR00096 Glutamine amidotransferase superfamily signature 242 253 7.8E-12 T 22-04-2016 SII_RS04485 e49f30c59c33bfca9490b2b3b1caac89 362 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 4 130 2.6E-54 T 22-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SII_RS04485 e49f30c59c33bfca9490b2b3b1caac89 362 Pfam PF00117 Glutamine amidotransferase class-I 175 350 1.4E-43 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 SII_RS04485 e49f30c59c33bfca9490b2b3b1caac89 362 SUPERFAMILY SSF52317 145 353 3.74E-56 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like SII_RS04485 e49f30c59c33bfca9490b2b3b1caac89 362 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 5 353 2.2E-145 T 22-04-2016 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SII_RS04485 e49f30c59c33bfca9490b2b3b1caac89 362 Gene3D G3DSA:3.50.30.20 2 145 2.5E-62 T 22-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SII_RS04485 e49f30c59c33bfca9490b2b3b1caac89 362 SUPERFAMILY SSF52021 2 145 4.71E-58 T 22-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SII_RS04485 e49f30c59c33bfca9490b2b3b1caac89 362 PANTHER PTHR11405 2 355 2.5E-212 T 22-04-2016 SII_RS04485 e49f30c59c33bfca9490b2b3b1caac89 362 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 259 276 4.5E-34 T 22-04-2016 SII_RS04485 e49f30c59c33bfca9490b2b3b1caac89 362 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 212 226 4.5E-34 T 22-04-2016 SII_RS04485 e49f30c59c33bfca9490b2b3b1caac89 362 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 242 258 4.5E-34 T 22-04-2016 SII_RS04485 e49f30c59c33bfca9490b2b3b1caac89 362 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 173 187 4.5E-34 T 22-04-2016 SII_RS04485 e49f30c59c33bfca9490b2b3b1caac89 362 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 284 295 4.5E-34 T 22-04-2016 SII_RS04485 e49f30c59c33bfca9490b2b3b1caac89 362 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 2 356 47.316 T 22-04-2016 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SII_RS04485 e49f30c59c33bfca9490b2b3b1caac89 362 PRINTS PR00097 Anthranilate synthase component II signature 215 224 4.1E-7 T 22-04-2016 SII_RS04485 e49f30c59c33bfca9490b2b3b1caac89 362 PRINTS PR00097 Anthranilate synthase component II signature 327 340 4.1E-7 T 22-04-2016 SII_RS04485 e49f30c59c33bfca9490b2b3b1caac89 362 PRINTS PR00097 Anthranilate synthase component II signature 242 253 4.1E-7 T 22-04-2016 SII_RS04485 e49f30c59c33bfca9490b2b3b1caac89 362 SMART SM01097 2 132 4.0E-91 T 22-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SII_RS05115 85ce3a448c27ff114e69fef386948101 59 TIGRFAM TIGR01439 lp_hng_hel_AbrB: transcriptional regulator, AbrB family 8 46 4.8E-14 T 22-04-2016 IPR007159 SpoVT-AbrB domain GO:0003677 SII_RS05115 85ce3a448c27ff114e69fef386948101 59 SMART SM00966 9 54 1.5E-9 T 22-04-2016 IPR007159 SpoVT-AbrB domain GO:0003677 SII_RS05115 85ce3a448c27ff114e69fef386948101 59 SUPERFAMILY SSF89447 5 50 2.79E-12 T 22-04-2016 SII_RS05115 85ce3a448c27ff114e69fef386948101 59 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 14 44 6.7E-8 T 22-04-2016 IPR007159 SpoVT-AbrB domain GO:0003677 SII_RS05115 85ce3a448c27ff114e69fef386948101 59 Gene3D G3DSA:2.10.260.10 8 47 3.3E-11 T 22-04-2016 SII_RS05425 e6baf0569b1a39c8e254aa89a9244a52 668 Pfam PF03577 Peptidase family C69 25 431 3.3E-117 T 22-04-2016 IPR005322 Peptidase C69, dipeptidase A GO:0006508|GO:0016805 SII_RS05425 e6baf0569b1a39c8e254aa89a9244a52 668 PANTHER PTHR12994 6 477 5.0E-57 T 22-04-2016 SII_RS05425 e6baf0569b1a39c8e254aa89a9244a52 668 PANTHER PTHR12994:SF17 6 477 5.0E-57 T 22-04-2016 SII_RS05425 e6baf0569b1a39c8e254aa89a9244a52 668 TIGRFAM TIGR01167 LPXTG_anchor: LPXTG cell wall anchor domain 635 666 2.5E-5 T 22-04-2016 IPR019931 LPXTG cell wall anchor domain SII_RS05425 e6baf0569b1a39c8e254aa89a9244a52 668 Gene3D G3DSA:3.60.60.10 26 256 3.0E-6 T 22-04-2016 IPR003199 Choloylglycine hydrolase/Peptidase C59 family GO:0016811 SII_RS02765 a7ddea0cbac4e0f48aba54a32e4992ef 214 Gene3D G3DSA:1.10.10.10 9 78 2.1E-29 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SII_RS02765 a7ddea0cbac4e0f48aba54a32e4992ef 214 PANTHER PTHR35786 1 213 3.1E-102 T 22-04-2016 SII_RS02765 a7ddea0cbac4e0f48aba54a32e4992ef 214 Gene3D G3DSA:3.40.50.720 81 213 4.6E-50 T 22-04-2016 IPR016040 NAD(P)-binding domain SII_RS02765 a7ddea0cbac4e0f48aba54a32e4992ef 214 Pfam PF06971 Putative DNA-binding protein N-terminus 9 56 1.4E-15 T 22-04-2016 IPR009718 Rex DNA-binding, C-terminal domain GO:0005737|GO:0045892|GO:0051775 SII_RS02765 a7ddea0cbac4e0f48aba54a32e4992ef 214 SMART SM00881 82 185 4.3E-11 T 22-04-2016 IPR003781 CoA-binding GO:0048037 SII_RS02765 a7ddea0cbac4e0f48aba54a32e4992ef 214 SUPERFAMILY SSF51735 86 211 2.25E-25 T 22-04-2016 IPR016040 NAD(P)-binding domain SII_RS02765 a7ddea0cbac4e0f48aba54a32e4992ef 214 Pfam PF02629 CoA binding domain 85 184 1.5E-26 T 22-04-2016 IPR003781 CoA-binding GO:0048037 SII_RS02765 a7ddea0cbac4e0f48aba54a32e4992ef 214 PANTHER PTHR35786:SF1 1 213 3.1E-102 T 22-04-2016 SII_RS02765 a7ddea0cbac4e0f48aba54a32e4992ef 214 Hamap MF_01131 Redox-sensing transcriptional repressor Rex [rex]. 4 214 38.484 T 22-04-2016 IPR022876 Redox-sensing transcriptional repressor Rex GO:0005737|GO:0045892|GO:0051775 SII_RS02765 a7ddea0cbac4e0f48aba54a32e4992ef 214 SUPERFAMILY SSF46785 10 81 4.08E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SII_RS02665 34222eef6eb5fef368eaf8092a5961d0 581 SUPERFAMILY SSF52540 330 567 3.79E-89 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS02665 34222eef6eb5fef368eaf8092a5961d0 581 Gene3D G3DSA:1.20.1560.10 7 320 1.5E-35 T 22-04-2016 SII_RS02665 34222eef6eb5fef368eaf8092a5961d0 581 Gene3D G3DSA:3.40.50.300 335 562 2.3E-81 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS02665 34222eef6eb5fef368eaf8092a5961d0 581 ProSitePatterns PS00211 ABC transporters family signature. 471 485 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SII_RS02665 34222eef6eb5fef368eaf8092a5961d0 581 SUPERFAMILY SSF90123 6 322 7.72E-43 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SII_RS02665 34222eef6eb5fef368eaf8092a5961d0 581 Pfam PF00005 ABC transporter 351 499 2.8E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SII_RS02665 34222eef6eb5fef368eaf8092a5961d0 581 Pfam PF00664 ABC transporter transmembrane region 62 284 6.7E-17 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SII_RS02665 34222eef6eb5fef368eaf8092a5961d0 581 PANTHER PTHR24221:SF195 24 578 2.0E-164 T 22-04-2016 SII_RS02665 34222eef6eb5fef368eaf8092a5961d0 581 PANTHER PTHR24221 24 578 2.0E-164 T 22-04-2016 SII_RS02665 34222eef6eb5fef368eaf8092a5961d0 581 SMART SM00382 359 545 1.6E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain SII_RS01745 ee251a8b0af48ed4974a4f38fe2ea801 299 Pfam PF01695 IstB-like ATP binding protein 142 268 6.8E-13 T 22-04-2016 IPR002611 IstB-like ATP-binding protein GO:0005524 SII_RS01745 ee251a8b0af48ed4974a4f38fe2ea801 299 PANTHER PTHR30050:SF8 27 299 6.3E-98 T 22-04-2016 SII_RS01745 ee251a8b0af48ed4974a4f38fe2ea801 299 PANTHER PTHR30050 27 299 6.3E-98 T 22-04-2016 SII_RS01745 ee251a8b0af48ed4974a4f38fe2ea801 299 Gene3D G3DSA:3.40.50.300 101 289 1.8E-31 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS01745 ee251a8b0af48ed4974a4f38fe2ea801 299 SUPERFAMILY SSF52540 130 265 1.03E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS01745 ee251a8b0af48ed4974a4f38fe2ea801 299 Pfam PF07319 Primosomal protein DnaI N-terminus 1 90 3.9E-22 T 22-04-2016 IPR009928 Primosomal DnaI, N-terminal SII_RS07575 17d75f5178ee91f18a38911eec4e5f06 272 Pfam PF08282 haloacid dehalogenase-like hydrolase 5 265 2.4E-49 T 22-04-2016 IPR023214 HAD-like domain SII_RS07575 17d75f5178ee91f18a38911eec4e5f06 272 ProSitePatterns PS01229 Hypothetical cof family signature 2. 219 241 - T 22-04-2016 SII_RS07575 17d75f5178ee91f18a38911eec4e5f06 272 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 4 238 4.0E-20 T 22-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 SII_RS07575 17d75f5178ee91f18a38911eec4e5f06 272 PANTHER PTHR10000 1 271 2.4E-55 T 22-04-2016 SII_RS07575 17d75f5178ee91f18a38911eec4e5f06 272 ProSitePatterns PS01228 Hypothetical cof family signature 1. 4 15 - T 22-04-2016 IPR000150 Cof protein GO:0016787 SII_RS07575 17d75f5178ee91f18a38911eec4e5f06 272 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 4 265 8.7E-48 T 22-04-2016 IPR000150 Cof protein GO:0016787 SII_RS07575 17d75f5178ee91f18a38911eec4e5f06 272 Gene3D G3DSA:3.40.50.1000 1 72 5.4E-48 T 22-04-2016 IPR023214 HAD-like domain SII_RS07575 17d75f5178ee91f18a38911eec4e5f06 272 Gene3D G3DSA:3.40.50.1000 174 271 5.4E-48 T 22-04-2016 IPR023214 HAD-like domain SII_RS07575 17d75f5178ee91f18a38911eec4e5f06 272 SUPERFAMILY SSF56784 1 270 2.0E-54 T 22-04-2016 IPR023214 HAD-like domain SII_RS07575 17d75f5178ee91f18a38911eec4e5f06 272 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 6 20 1.6E-6 T 22-04-2016 SII_RS07575 17d75f5178ee91f18a38911eec4e5f06 272 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 219 238 1.6E-6 T 22-04-2016 SII_RS07575 17d75f5178ee91f18a38911eec4e5f06 272 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 242 254 1.6E-6 T 22-04-2016 SII_RS07575 17d75f5178ee91f18a38911eec4e5f06 272 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 155 165 1.6E-6 T 22-04-2016 SII_RS07575 17d75f5178ee91f18a38911eec4e5f06 272 PANTHER PTHR10000:SF8 1 271 2.4E-55 T 22-04-2016 SII_RS03045 e3340436292c88b0c66e310b144a1358 455 Pfam PF01522 Polysaccharide deacetylase 257 370 2.4E-36 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 SII_RS03045 e3340436292c88b0c66e310b144a1358 455 SUPERFAMILY SSF144015 34 260 7.85E-36 T 22-04-2016 SII_RS03045 e3340436292c88b0c66e310b144a1358 455 Gene3D G3DSA:3.20.20.370 235 444 3.0E-73 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 SII_RS03045 e3340436292c88b0c66e310b144a1358 455 PANTHER PTHR10587 259 441 4.0E-65 T 22-04-2016 SII_RS03045 e3340436292c88b0c66e310b144a1358 455 SUPERFAMILY SSF88713 247 443 2.18E-67 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 SII_RS01655 3728ba248eb6a9372a010aedd78aef78 559 PANTHER PTHR24220:SF588 282 417 2.3E-198 T 22-04-2016 SII_RS01655 3728ba248eb6a9372a010aedd78aef78 559 PANTHER PTHR24220:SF588 7 251 2.3E-198 T 22-04-2016 SII_RS01655 3728ba248eb6a9372a010aedd78aef78 559 SUPERFAMILY SSF52540 287 524 7.79E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS01655 3728ba248eb6a9372a010aedd78aef78 559 Gene3D G3DSA:3.40.50.300 294 527 5.1E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS01655 3728ba248eb6a9372a010aedd78aef78 559 Gene3D G3DSA:3.40.50.300 2 238 1.0E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS01655 3728ba248eb6a9372a010aedd78aef78 559 Pfam PF00005 ABC transporter 23 173 9.1E-25 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SII_RS01655 3728ba248eb6a9372a010aedd78aef78 559 Pfam PF00005 ABC transporter 312 457 9.9E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SII_RS01655 3728ba248eb6a9372a010aedd78aef78 559 SMART SM00382 32 224 1.8E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain SII_RS01655 3728ba248eb6a9372a010aedd78aef78 559 SMART SM00382 321 505 4.8E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain SII_RS01655 3728ba248eb6a9372a010aedd78aef78 559 Pfam PF12558 ATP-binding cassette cobalt transporter 237 304 1.1E-12 T 22-04-2016 IPR022216 ABC cobalt transporter GO:0016820 KEGG: 00920+3.6.3.- SII_RS01655 3728ba248eb6a9372a010aedd78aef78 559 SUPERFAMILY SSF52540 4 236 8.8E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS01655 3728ba248eb6a9372a010aedd78aef78 559 PANTHER PTHR24220 282 417 2.3E-198 T 22-04-2016 SII_RS01655 3728ba248eb6a9372a010aedd78aef78 559 PANTHER PTHR24220 7 251 2.3E-198 T 22-04-2016 SII_RS01655 3728ba248eb6a9372a010aedd78aef78 559 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SII_RS01655 3728ba248eb6a9372a010aedd78aef78 559 ProSitePatterns PS00211 ABC transporters family signature. 429 443 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SII_RS04405 7c79c7443a6d7cbb7db7cc5a5608036d 129 Gene3D G3DSA:3.40.140.10 4 126 7.6E-49 T 22-04-2016 SII_RS04405 7c79c7443a6d7cbb7db7cc5a5608036d 129 PANTHER PTHR11644 5 129 3.4E-54 T 22-04-2016 SII_RS04405 7c79c7443a6d7cbb7db7cc5a5608036d 129 TIGRFAM TIGR01354 cyt_deam_tetra: cytidine deaminase 6 127 2.9E-45 T 22-04-2016 IPR006262 Cytidine deaminase, homotetrameric GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 SII_RS04405 7c79c7443a6d7cbb7db7cc5a5608036d 129 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 53 93 - T 22-04-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 SII_RS04405 7c79c7443a6d7cbb7db7cc5a5608036d 129 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 5 101 6.8E-18 T 22-04-2016 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 SII_RS04405 7c79c7443a6d7cbb7db7cc5a5608036d 129 SUPERFAMILY SSF53927 4 126 1.51E-45 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 SII_RS07590 c360154e796ea6f0d81d12aa99182b32 308 SUPERFAMILY SSF161098 102 287 1.44E-21 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SII_RS07590 c360154e796ea6f0d81d12aa99182b32 308 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 28 75 3.9E-8 T 22-04-2016 IPR025966 Oligopeptide transport permease C-like, N-terminal domain SII_RS07590 c360154e796ea6f0d81d12aa99182b32 308 PANTHER PTHR30465 21 308 5.8E-152 T 22-04-2016 SII_RS07590 c360154e796ea6f0d81d12aa99182b32 308 PANTHER PTHR30465:SF75 21 308 5.8E-152 T 22-04-2016 SII_RS07590 c360154e796ea6f0d81d12aa99182b32 308 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 125 306 1.4E-21 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SII_RS07590 c360154e796ea6f0d81d12aa99182b32 308 Gene3D G3DSA:1.10.3720.10 101 302 2.6E-18 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SII_RS04450 83bd0e532a76edf75edaa76bcff9504a 224 Gene3D G3DSA:3.40.50.2300 2 121 2.8E-34 T 22-04-2016 SII_RS04450 83bd0e532a76edf75edaa76bcff9504a 224 Pfam PF00072 Response regulator receiver domain 4 112 1.7E-22 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SII_RS04450 83bd0e532a76edf75edaa76bcff9504a 224 PANTHER PTHR26402 2 222 4.1E-108 T 22-04-2016 SII_RS04450 83bd0e532a76edf75edaa76bcff9504a 224 SUPERFAMILY SSF52172 1 177 6.04E-36 T 22-04-2016 IPR011006 CheY-like superfamily SII_RS04450 83bd0e532a76edf75edaa76bcff9504a 224 PANTHER PTHR26402:SF518 2 222 4.1E-108 T 22-04-2016 SII_RS04450 83bd0e532a76edf75edaa76bcff9504a 224 SMART SM00862 145 220 7.2E-16 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SII_RS04450 83bd0e532a76edf75edaa76bcff9504a 224 Gene3D G3DSA:1.10.10.10 124 221 6.6E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SII_RS04450 83bd0e532a76edf75edaa76bcff9504a 224 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 220 1.7E-18 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SII_RS04450 83bd0e532a76edf75edaa76bcff9504a 224 SMART SM00448 2 112 8.4E-35 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SII_RS07875 f037d9314a99b6b48d7e3ea972117c91 203 Gene3D G3DSA:1.10.3290.10 17 202 3.9E-46 T 22-04-2016 IPR003812 Fido domain SII_RS07875 f037d9314a99b6b48d7e3ea972117c91 203 PANTHER PTHR39560 1 201 4.6E-27 T 22-04-2016 SII_RS07875 f037d9314a99b6b48d7e3ea972117c91 203 PANTHER PTHR39560:SF1 1 201 4.6E-27 T 22-04-2016 SII_RS07875 f037d9314a99b6b48d7e3ea972117c91 203 Pfam PF02661 Fic/DOC family 62 156 2.4E-18 T 22-04-2016 IPR003812 Fido domain SII_RS07875 f037d9314a99b6b48d7e3ea972117c91 203 SUPERFAMILY SSF140931 45 201 3.53E-29 T 22-04-2016 IPR003812 Fido domain SII_RS07750 4012b9eb7c2f5c4966922cf3f6ef66db 144 Pfam PF03610 PTS system fructose IIA component 2 114 5.4E-32 T 22-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 SII_RS07750 4012b9eb7c2f5c4966922cf3f6ef66db 144 PANTHER PTHR33799 1 122 1.9E-30 T 22-04-2016 SII_RS07750 4012b9eb7c2f5c4966922cf3f6ef66db 144 PANTHER PTHR33799:SF1 1 122 1.9E-30 T 22-04-2016 SII_RS07750 4012b9eb7c2f5c4966922cf3f6ef66db 144 Gene3D G3DSA:3.40.50.510 1 132 2.1E-40 T 22-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 SII_RS07750 4012b9eb7c2f5c4966922cf3f6ef66db 144 SUPERFAMILY SSF53062 1 127 2.88E-34 T 22-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 SII_RS01480 07e00b74de5d558afff8f7ad3b513b02 96 SUPERFAMILY SSF54995 1 95 6.02E-31 T 22-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 SII_RS01480 07e00b74de5d558afff8f7ad3b513b02 96 Gene3D G3DSA:3.30.70.60 1 95 1.6E-33 T 22-04-2016 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 SII_RS01480 07e00b74de5d558afff8f7ad3b513b02 96 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 96 21.754 T 22-04-2016 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 SII_RS01480 07e00b74de5d558afff8f7ad3b513b02 96 Pfam PF01250 Ribosomal protein S6 3 93 6.2E-26 T 22-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 SII_RS01480 07e00b74de5d558afff8f7ad3b513b02 96 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 95 1.6E-26 T 22-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 SII_RS01480 07e00b74de5d558afff8f7ad3b513b02 96 PANTHER PTHR21011 1 95 5.1E-25 T 22-04-2016 SII_RS09105 8fc96bf089aa89b3a99f09623e42971e 328 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 14 24 6.6E-5 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SII_RS09105 8fc96bf089aa89b3a99f09623e42971e 328 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 4 14 6.6E-5 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SII_RS09105 8fc96bf089aa89b3a99f09623e42971e 328 Gene3D G3DSA:1.10.260.40 3 54 1.2E-25 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SII_RS09105 8fc96bf089aa89b3a99f09623e42971e 328 Gene3D G3DSA:3.40.50.2300 55 177 5.4E-38 T 22-04-2016 SII_RS09105 8fc96bf089aa89b3a99f09623e42971e 328 SUPERFAMILY SSF47413 2 60 1.07E-18 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SII_RS09105 8fc96bf089aa89b3a99f09623e42971e 328 ProSitePatterns PS00356 LacI-type HTH domain signature. 5 23 - T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SII_RS09105 8fc96bf089aa89b3a99f09623e42971e 328 SUPERFAMILY SSF53822 62 315 5.35E-45 T 22-04-2016 IPR028082 Periplasmic binding protein-like I SII_RS09105 8fc96bf089aa89b3a99f09623e42971e 328 Gene3D G3DSA:3.40.50.2300 178 307 1.4E-26 T 22-04-2016 SII_RS09105 8fc96bf089aa89b3a99f09623e42971e 328 SMART SM00354 2 72 3.8E-36 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SII_RS09105 8fc96bf089aa89b3a99f09623e42971e 328 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 49 2.7E-22 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SII_RS09105 8fc96bf089aa89b3a99f09623e42971e 328 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 61 324 2.0E-19 T 22-04-2016 IPR001761 Periplasmic binding protein/LacI sugar binding domain SII_RS09105 8fc96bf089aa89b3a99f09623e42971e 328 PANTHER PTHR30146 1 327 3.0E-107 T 22-04-2016 SII_RS09105 8fc96bf089aa89b3a99f09623e42971e 328 PANTHER PTHR30146:SF30 1 327 3.0E-107 T 22-04-2016 SII_RS01100 6e0294f2a428645b4cdc8139468af27e 584 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 337 553 4.1E-22 T 22-04-2016 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 SII_RS01100 6e0294f2a428645b4cdc8139468af27e 584 Pfam PF10110 Membrane domain of glycerophosphoryl diester phosphodiesterase 5 307 4.4E-71 T 22-04-2016 IPR018476 Glycerophosphoryl diester phosphodiesterase, membrane domain SII_RS01100 6e0294f2a428645b4cdc8139468af27e 584 PANTHER PTHR23344:SF23 68 574 6.7E-90 T 22-04-2016 SII_RS01100 6e0294f2a428645b4cdc8139468af27e 584 Gene3D G3DSA:3.20.20.190 313 565 6.5E-51 T 22-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 SII_RS01100 6e0294f2a428645b4cdc8139468af27e 584 PANTHER PTHR23344 68 574 6.7E-90 T 22-04-2016 IPR004129 Glycerophosphoryl diester phosphodiesterase GO:0008889 SII_RS01100 6e0294f2a428645b4cdc8139468af27e 584 SUPERFAMILY SSF51695 330 559 6.28E-50 T 22-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 SII_RS00495 5b2af9d077e5d8f6377cf01595572cc5 469 Pfam PF02378 Phosphotransferase system, EIIC 121 402 2.3E-32 T 22-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 SII_RS00495 5b2af9d077e5d8f6377cf01595572cc5 469 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 19 36 - T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 SII_RS00495 5b2af9d077e5d8f6377cf01595572cc5 469 PANTHER PTHR30175 1 467 9.2E-134 T 22-04-2016 SII_RS00495 5b2af9d077e5d8f6377cf01595572cc5 469 Pfam PF00367 phosphotransferase system, EIIB 9 41 2.8E-12 T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 SII_RS00495 5b2af9d077e5d8f6377cf01595572cc5 469 Gene3D G3DSA:3.30.1360.60 1 80 4.2E-22 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 SII_RS00495 5b2af9d077e5d8f6377cf01595572cc5 469 SUPERFAMILY SSF55604 6 79 9.55E-17 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 SII_RS00495 5b2af9d077e5d8f6377cf01595572cc5 469 PANTHER PTHR30175:SF3 1 467 9.2E-134 T 22-04-2016 SII_RS09455 496fabd64a64d442630ba17af7c0bdc6 431 Gene3D G3DSA:3.30.830.10 284 385 7.6E-7 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 SII_RS09455 496fabd64a64d442630ba17af7c0bdc6 431 Gene3D G3DSA:3.30.830.10 19 226 1.7E-36 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 SII_RS09455 496fabd64a64d442630ba17af7c0bdc6 431 Pfam PF05193 Peptidase M16 inactive domain 188 366 4.9E-10 T 22-04-2016 IPR007863 Peptidase M16, C-terminal SII_RS09455 496fabd64a64d442630ba17af7c0bdc6 431 Pfam PF00675 Insulinase (Peptidase family M16) 56 179 2.3E-15 T 22-04-2016 IPR011765 Peptidase M16, N-terminal SII_RS09455 496fabd64a64d442630ba17af7c0bdc6 431 PANTHER PTHR11851 23 413 4.4E-91 T 22-04-2016 SII_RS09455 496fabd64a64d442630ba17af7c0bdc6 431 PANTHER PTHR11851:SF134 23 413 4.4E-91 T 22-04-2016 SII_RS09455 496fabd64a64d442630ba17af7c0bdc6 431 SUPERFAMILY SSF63411 285 424 2.57E-11 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 SII_RS09455 496fabd64a64d442630ba17af7c0bdc6 431 SUPERFAMILY SSF63411 19 225 3.12E-37 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 SII_RS00530 f9a1e4445dfd2a196fafa850457d61ff 336 PANTHER PTHR38682 1 335 8.5E-29 T 22-04-2016 SII_RS00530 f9a1e4445dfd2a196fafa850457d61ff 336 Pfam PF01992 ATP synthase (C/AC39) subunit 10 329 2.5E-47 T 22-04-2016 IPR002843 ATPase, V0 complex, c/d subunit SII_RS00530 f9a1e4445dfd2a196fafa850457d61ff 336 SUPERFAMILY SSF103486 6 331 1.44E-59 T 22-04-2016 IPR002843 ATPase, V0 complex, c/d subunit SII_RS05145 77c6d4e4cd7d900ba894028ac56cfca1 129 Pfam PF12666 PrgI family protein 6 95 2.5E-26 T 22-04-2016 IPR024414 Uncharacterised protein family PrgI SII_RS02875 60ab2b97f8386782c5410afdf2a24caa 271 PANTHER PTHR40047 1 271 4.9E-81 T 22-04-2016 SII_RS02875 60ab2b97f8386782c5410afdf2a24caa 271 TIGRFAM TIGR03943 TIGR03943: TIGR03943 family protein 19 266 1.8E-52 T 22-04-2016 IPR015402 Protein of unknown function DUF1980 SII_RS02875 60ab2b97f8386782c5410afdf2a24caa 271 Pfam PF09323 Domain of unknown function (DUF1980) 1 178 3.7E-63 T 22-04-2016 IPR015402 Protein of unknown function DUF1980 SII_RS09470 cc9d29786d9f05752a8d7934314f9c2b 365 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 356 5.0E-17 T 22-04-2016 IPR003395 RecF/RecN/SMC, N-terminal SII_RS09470 cc9d29786d9f05752a8d7934314f9c2b 365 Gene3D G3DSA:3.40.50.300 1 165 4.7E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS09470 cc9d29786d9f05752a8d7934314f9c2b 365 Gene3D G3DSA:3.40.50.300 233 357 4.7E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS09470 cc9d29786d9f05752a8d7934314f9c2b 365 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 1 357 4.1E-124 T 22-04-2016 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 SII_RS09470 cc9d29786d9f05752a8d7934314f9c2b 365 SUPERFAMILY SSF52540 1 359 2.85E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS09470 cc9d29786d9f05752a8d7934314f9c2b 365 PANTHER PTHR32182:SF0 1 345 4.9E-72 T 22-04-2016 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 SII_RS09470 cc9d29786d9f05752a8d7934314f9c2b 365 PANTHER PTHR32182 1 345 4.9E-72 T 22-04-2016 SII_RS09470 cc9d29786d9f05752a8d7934314f9c2b 365 ProSitePatterns PS00618 RecF protein signature 2. 305 323 - T 22-04-2016 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 SII_RS09470 cc9d29786d9f05752a8d7934314f9c2b 365 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 365 97.61 T 22-04-2016 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 SII_RS09470 cc9d29786d9f05752a8d7934314f9c2b 365 ProSitePatterns PS00617 RecF protein signature 1. 116 136 - T 22-04-2016 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 SII_RS07475 08398e85f93dc95750085289d2efbc38 615 PANTHER PTHR11785:SF125 515 529 2.8E-161 T 22-04-2016 SII_RS07475 08398e85f93dc95750085289d2efbc38 615 PANTHER PTHR11785:SF125 7 476 2.8E-161 T 22-04-2016 SII_RS07475 08398e85f93dc95750085289d2efbc38 615 PANTHER PTHR11785 515 529 2.8E-161 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 SII_RS07475 08398e85f93dc95750085289d2efbc38 615 PANTHER PTHR11785 7 476 2.8E-161 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 SII_RS07475 08398e85f93dc95750085289d2efbc38 615 Pfam PF13520 Amino acid permease 29 451 6.4E-31 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 SII_RS08680 7f140c3076ff418deacf593e7d61908c 72 SMART SM00316 4 72 3.2E-4 T 22-04-2016 IPR022967 RNA-binding domain, S1 SII_RS08680 7f140c3076ff418deacf593e7d61908c 72 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 5.3E-28 T 22-04-2016 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 SII_RS08680 7f140c3076ff418deacf593e7d61908c 72 PANTHER PTHR33370 2 72 4.0E-45 T 22-04-2016 SII_RS08680 7f140c3076ff418deacf593e7d61908c 72 Gene3D G3DSA:2.40.50.140 2 72 1.1E-38 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SII_RS08680 7f140c3076ff418deacf593e7d61908c 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 70 6.0E-38 T 22-04-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 SII_RS08680 7f140c3076ff418deacf593e7d61908c 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 26.265 T 22-04-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 SII_RS08680 7f140c3076ff418deacf593e7d61908c 72 SUPERFAMILY SSF50249 2 71 1.68E-27 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SII_RS00980 13f3efccf419b6b3b73993622cb86365 210 Pfam PF04263 Thiamin pyrophosphokinase, catalytic domain 20 110 4.5E-20 T 22-04-2016 IPR007371 Thiamin pyrophosphokinase, catalytic domain GO:0004788|GO:0005524|GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356 SII_RS00980 13f3efccf419b6b3b73993622cb86365 210 Gene3D G3DSA:3.40.50.10240 3 111 6.0E-26 T 22-04-2016 IPR007371 Thiamin pyrophosphokinase, catalytic domain GO:0004788|GO:0005524|GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356 SII_RS00980 13f3efccf419b6b3b73993622cb86365 210 SMART SM00983 139 202 2.6E-19 T 22-04-2016 IPR007373 Thiamin pyrophosphokinase, vitamin B1-binding domain GO:0009229|GO:0030975 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|UniPathway: UPA00060 SII_RS00980 13f3efccf419b6b3b73993622cb86365 210 PANTHER PTHR41299:SF1 1 210 6.3E-49 T 22-04-2016 SII_RS00980 13f3efccf419b6b3b73993622cb86365 210 Pfam PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain 141 200 2.0E-7 T 22-04-2016 IPR007373 Thiamin pyrophosphokinase, vitamin B1-binding domain GO:0009229|GO:0030975 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|UniPathway: UPA00060 SII_RS00980 13f3efccf419b6b3b73993622cb86365 210 PANTHER PTHR41299 1 210 6.3E-49 T 22-04-2016 SII_RS00980 13f3efccf419b6b3b73993622cb86365 210 SUPERFAMILY SSF63999 1 126 2.88E-33 T 22-04-2016 IPR007371 Thiamin pyrophosphokinase, catalytic domain GO:0004788|GO:0005524|GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356 SII_RS00980 13f3efccf419b6b3b73993622cb86365 210 TIGRFAM TIGR01378 thi_PPkinase: thiamine pyrophosphokinase 17 204 8.4E-54 T 22-04-2016 IPR006282 Thiamin pyrophosphokinase GO:0004788|GO:0006772 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|UniPathway: UPA00060 SII_RS05195 971e18702cb293dd1268de790fe62ab6 445 TIGRFAM TIGR00350 lytR_cpsA_psr: cell envelope-related function transcriptional attenuator common domain 188 362 2.9E-23 T 22-04-2016 IPR004474 Cell envelope-related transcriptional attenuator domain SII_RS05195 971e18702cb293dd1268de790fe62ab6 445 PANTHER PTHR33392 59 440 3.2E-84 T 22-04-2016 SII_RS05195 971e18702cb293dd1268de790fe62ab6 445 Pfam PF03816 Cell envelope-related transcriptional attenuator domain 188 362 6.4E-49 T 22-04-2016 IPR004474 Cell envelope-related transcriptional attenuator domain SII_RS05195 971e18702cb293dd1268de790fe62ab6 445 PANTHER PTHR33392:SF6 59 440 3.2E-84 T 22-04-2016 SII_RS03110 48eb85a24d5440b0768cce5107ff5e03 358 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 5 118 3.0E-31 T 22-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 SII_RS03110 48eb85a24d5440b0768cce5107ff5e03 358 Gene3D G3DSA:3.40.50.720 2 140 5.9E-61 T 22-04-2016 IPR016040 NAD(P)-binding domain SII_RS03110 48eb85a24d5440b0768cce5107ff5e03 358 Gene3D G3DSA:3.30.360.10 141 325 3.5E-75 T 22-04-2016 SII_RS03110 48eb85a24d5440b0768cce5107ff5e03 358 SMART SM00859 4 119 1.2E-42 T 22-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 SII_RS03110 48eb85a24d5440b0768cce5107ff5e03 358 PIRSF PIRSF000148 2 347 5.9E-123 T 22-04-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 SII_RS03110 48eb85a24d5440b0768cce5107ff5e03 358 PANTHER PTHR10174:SF2 46 344 8.7E-72 T 22-04-2016 SII_RS03110 48eb85a24d5440b0768cce5107ff5e03 358 SUPERFAMILY SSF55347 127 329 1.05E-68 T 22-04-2016 SII_RS03110 48eb85a24d5440b0768cce5107ff5e03 358 PANTHER PTHR10174 46 344 8.7E-72 T 22-04-2016 SII_RS03110 48eb85a24d5440b0768cce5107ff5e03 358 SUPERFAMILY SSF51735 3 155 8.97E-50 T 22-04-2016 IPR016040 NAD(P)-binding domain SII_RS03110 48eb85a24d5440b0768cce5107ff5e03 358 TIGRFAM TIGR01296 asd_B: aspartate-semialdehyde dehydrogenase 5 342 9.0E-136 T 22-04-2016 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 SII_RS03110 48eb85a24d5440b0768cce5107ff5e03 358 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 137 328 1.6E-52 T 22-04-2016 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 SII_RS03110 48eb85a24d5440b0768cce5107ff5e03 358 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 2 342 36.117 T 22-04-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 SII_RS07785 83df64a7f938ea79fb03599bf514361e 158 Pfam PF00255 Glutathione peroxidase 4 111 1.6E-37 T 22-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 SII_RS07785 83df64a7f938ea79fb03599bf514361e 158 PIRSF PIRSF000303 1 158 4.5E-61 T 22-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 SII_RS07785 83df64a7f938ea79fb03599bf514361e 158 SUPERFAMILY SSF52833 3 158 1.35E-54 T 22-04-2016 IPR012336 Thioredoxin-like fold SII_RS07785 83df64a7f938ea79fb03599bf514361e 158 PRINTS PR01011 Glutathione peroxidase family signature 122 131 3.7E-17 T 22-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 SII_RS07785 83df64a7f938ea79fb03599bf514361e 158 PRINTS PR01011 Glutathione peroxidase family signature 22 39 3.7E-17 T 22-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 SII_RS07785 83df64a7f938ea79fb03599bf514361e 158 PRINTS PR01011 Glutathione peroxidase family signature 57 73 3.7E-17 T 22-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 SII_RS07785 83df64a7f938ea79fb03599bf514361e 158 Gene3D G3DSA:3.40.30.10 3 158 4.9E-66 T 22-04-2016 IPR012336 Thioredoxin-like fold SII_RS07785 83df64a7f938ea79fb03599bf514361e 158 ProSitePatterns PS00763 Glutathione peroxidases signature 2. 60 67 - T 22-04-2016 IPR029760 Glutathione peroxidase conserved site SII_RS07785 83df64a7f938ea79fb03599bf514361e 158 PANTHER PTHR11592 4 158 1.2E-77 T 22-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 SII_RS07785 83df64a7f938ea79fb03599bf514361e 158 ProSitePatterns PS00460 Glutathione peroxidases active site. 24 39 - T 22-04-2016 IPR029759 Glutathione peroxidase active site SII_RS02605 97ff2d65dac0288c8f629f0464a5ceab 72 SUPERFAMILY SSF53795 20 68 8.97E-8 T 22-04-2016 SII_RS02605 97ff2d65dac0288c8f629f0464a5ceab 72 Gene3D G3DSA:3.40.50.300 20 59 1.3E-7 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS02605 97ff2d65dac0288c8f629f0464a5ceab 72 Pfam PF00005 ABC transporter 20 57 7.3E-6 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SII_RS05700 60b5f547dc6ffdb03a66f294a4ac3c23 326 Pfam PF03601 Conserved hypothetical protein 698 7 306 1.2E-81 T 22-04-2016 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 SII_RS05700 60b5f547dc6ffdb03a66f294a4ac3c23 326 PANTHER PTHR30106 3 325 1.6E-114 T 22-04-2016 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 SII_RS05700 60b5f547dc6ffdb03a66f294a4ac3c23 326 PANTHER PTHR30106:SF1 3 325 1.6E-114 T 22-04-2016 SII_RS01315 ece920567ccde0d6c8738cbdd77955af 289 SUPERFAMILY SSF46689 240 289 7.53E-15 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SII_RS01315 ece920567ccde0d6c8738cbdd77955af 289 SUPERFAMILY SSF51215 35 170 3.66E-13 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 SII_RS01315 ece920567ccde0d6c8738cbdd77955af 289 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 271 287 6.8E-7 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 SII_RS01315 ece920567ccde0d6c8738cbdd77955af 289 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 256 271 6.8E-7 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 SII_RS01315 ece920567ccde0d6c8738cbdd77955af 289 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 241 283 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 SII_RS01315 ece920567ccde0d6c8738cbdd77955af 289 Pfam PF02311 AraC-like ligand binding domain 27 143 6.2E-16 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 SII_RS01315 ece920567ccde0d6c8738cbdd77955af 289 Pfam PF12833 Helix-turn-helix domain 210 288 3.0E-22 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SII_RS01315 ece920567ccde0d6c8738cbdd77955af 289 Gene3D G3DSA:1.10.10.60 241 289 1.5E-20 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SII_RS01315 ece920567ccde0d6c8738cbdd77955af 289 SMART SM00342 204 287 2.2E-30 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SII_RS01315 ece920567ccde0d6c8738cbdd77955af 289 Gene3D G3DSA:2.60.120.280 36 170 2.9E-12 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 SII_RS01315 ece920567ccde0d6c8738cbdd77955af 289 SUPERFAMILY SSF46689 188 238 5.69E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SII_RS01315 ece920567ccde0d6c8738cbdd77955af 289 PANTHER PTHR11019 21 289 4.1E-39 T 22-04-2016 SII_RS01315 ece920567ccde0d6c8738cbdd77955af 289 Gene3D G3DSA:1.10.10.60 186 240 2.5E-19 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SII_RS00625 4e878b20cfc8728d8c171fa44d4cd360 69 Gene3D G3DSA:3.30.70.100 1 66 5.4E-15 T 22-04-2016 SII_RS00625 4e878b20cfc8728d8c171fa44d4cd360 69 SUPERFAMILY SSF55008 1 66 3.93E-13 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 SII_RS00625 4e878b20cfc8728d8c171fa44d4cd360 69 Pfam PF00403 Heavy-metal-associated domain 5 64 3.5E-14 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 SII_RS02895 3dac9be9d1b846bde4b928d169054c19 90 PANTHER PTHR33885 1 81 1.1E-19 T 22-04-2016 SII_RS02895 3dac9be9d1b846bde4b928d169054c19 90 Pfam PF04024 PspC domain 4 60 4.1E-15 T 22-04-2016 IPR007168 Phage shock protein, PspC, N-terminal SII_RS07340 be37c9e46b8bbab5a0312f0c71658419 245 Gene3D G3DSA:3.40.50.150 2 245 8.5E-46 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SII_RS07340 be37c9e46b8bbab5a0312f0c71658419 245 SUPERFAMILY SSF53335 3 245 3.62E-51 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SII_RS07340 be37c9e46b8bbab5a0312f0c71658419 245 PANTHER PTHR10108 5 166 1.1E-46 T 22-04-2016 SII_RS07340 be37c9e46b8bbab5a0312f0c71658419 245 PANTHER PTHR10108 192 244 1.1E-46 T 22-04-2016 SII_RS07340 be37c9e46b8bbab5a0312f0c71658419 245 Pfam PF13649 Methyltransferase domain 40 134 6.4E-18 T 22-04-2016 SII_RS07340 be37c9e46b8bbab5a0312f0c71658419 245 PANTHER PTHR10108:SF872 5 166 1.1E-46 T 22-04-2016 SII_RS07340 be37c9e46b8bbab5a0312f0c71658419 245 PANTHER PTHR10108:SF872 192 244 1.1E-46 T 22-04-2016 SII_RS09110 89c414b39c985b9a374b83b94e57f331 691 Gene3D G3DSA:2.60.40.10 94 189 8.1E-19 T 22-04-2016 IPR013783 Immunoglobulin-like fold SII_RS09110 89c414b39c985b9a374b83b94e57f331 691 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 104 175 1.7E-10 T 22-04-2016 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 SII_RS09110 89c414b39c985b9a374b83b94e57f331 691 PANTHER PTHR10357:SF99 25 644 2.4E-119 T 22-04-2016 SII_RS09110 89c414b39c985b9a374b83b94e57f331 691 SMART SM00642 227 600 2.0E-6 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 SII_RS09110 89c414b39c985b9a374b83b94e57f331 691 SUPERFAMILY SSF51445 202 607 1.84E-108 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily SII_RS09110 89c414b39c985b9a374b83b94e57f331 691 PANTHER PTHR10357 25 644 2.4E-119 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 SII_RS09110 89c414b39c985b9a374b83b94e57f331 691 Pfam PF00128 Alpha amylase, catalytic domain 249 343 5.8E-8 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 SII_RS09110 89c414b39c985b9a374b83b94e57f331 691 Pfam PF00128 Alpha amylase, catalytic domain 366 558 8.0E-8 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 SII_RS09110 89c414b39c985b9a374b83b94e57f331 691 Gene3D G3DSA:3.20.20.80 201 608 1.9E-91 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 SII_RS09110 89c414b39c985b9a374b83b94e57f331 691 TIGRFAM TIGR02104 pulA_typeI: pullulanase, type I 93 649 9.7E-178 T 22-04-2016 IPR011840 Pullulanase, type I SII_RS09110 89c414b39c985b9a374b83b94e57f331 691 SUPERFAMILY SSF81296 98 191 1.96E-21 T 22-04-2016 IPR014756 Immunoglobulin E-set SII_RS02100 eb88fb0384599b3125c73f9999dea0bc 176 PANTHER PTHR36439:SF1 1 176 5.0E-24 T 22-04-2016 SII_RS02100 eb88fb0384599b3125c73f9999dea0bc 176 SUPERFAMILY SSF160379 2 175 2.09E-41 T 22-04-2016 SII_RS02100 eb88fb0384599b3125c73f9999dea0bc 176 Pfam PF08002 Protein of unknown function (DUF1697) 2 135 2.0E-29 T 22-04-2016 IPR012545 Protein of unknown function DUF1697 SII_RS02100 eb88fb0384599b3125c73f9999dea0bc 176 PANTHER PTHR36439 1 176 5.0E-24 T 22-04-2016 SII_RS02100 eb88fb0384599b3125c73f9999dea0bc 176 PIRSF PIRSF008502 1 176 9.1E-32 T 22-04-2016 IPR012545 Protein of unknown function DUF1697 SII_RS02100 eb88fb0384599b3125c73f9999dea0bc 176 Gene3D G3DSA:3.30.70.1280 2 86 4.7E-21 T 22-04-2016 SII_RS03155 973aed7f95467db054022410dd97e09f 452 Gene3D G3DSA:3.40.50.150 1 203 2.0E-70 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SII_RS03155 973aed7f95467db054022410dd97e09f 452 Gene3D G3DSA:3.90.120.10 343 393 6.7E-7 T 22-04-2016 SII_RS03155 973aed7f95467db054022410dd97e09f 452 Gene3D G3DSA:3.90.120.10 260 317 3.9E-4 T 22-04-2016 SII_RS03155 973aed7f95467db054022410dd97e09f 452 SUPERFAMILY SSF53335 380 443 6.85E-89 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SII_RS03155 973aed7f95467db054022410dd97e09f 452 SUPERFAMILY SSF53335 239 298 6.85E-89 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SII_RS03155 973aed7f95467db054022410dd97e09f 452 SUPERFAMILY SSF53335 1 207 6.85E-89 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SII_RS03155 973aed7f95467db054022410dd97e09f 452 Pfam PF00145 C-5 cytosine-specific DNA methylase 1 442 1.9E-90 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SII_RS03155 973aed7f95467db054022410dd97e09f 452 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 154 167 1.9E-19 T 22-04-2016 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 SII_RS03155 973aed7f95467db054022410dd97e09f 452 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 2 18 1.9E-19 T 22-04-2016 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 SII_RS03155 973aed7f95467db054022410dd97e09f 452 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 108 122 1.9E-19 T 22-04-2016 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 SII_RS03155 973aed7f95467db054022410dd97e09f 452 TIGRFAM TIGR00675 dcm: DNA (cytosine-5-)-methyltransferase 3 441 5.1E-94 T 22-04-2016 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 SII_RS03155 973aed7f95467db054022410dd97e09f 452 ProSitePatterns PS00095 C-5 cytosine-specific DNA methylases C-terminal signature. 423 441 - T 22-04-2016 IPR031303 DNA methylase, C-5 cytosine-specific, conserved site KEGG: 00270+2.1.1.37 SII_RS03155 973aed7f95467db054022410dd97e09f 452 Gene3D G3DSA:3.90.120.10 394 429 1.2E-13 T 22-04-2016 SII_RS03155 973aed7f95467db054022410dd97e09f 452 PANTHER PTHR10629:SF31 245 451 1.8E-55 T 22-04-2016 SII_RS03155 973aed7f95467db054022410dd97e09f 452 PANTHER PTHR10629:SF31 1 209 1.8E-55 T 22-04-2016 SII_RS03155 973aed7f95467db054022410dd97e09f 452 ProSitePatterns PS00094 C-5 cytosine-specific DNA methylases active site. 69 81 - T 22-04-2016 IPR018117 DNA methylase, C-5 cytosine-specific, active site KEGG: 00270+2.1.1.37 SII_RS03155 973aed7f95467db054022410dd97e09f 452 PANTHER PTHR10629 245 451 1.8E-55 T 22-04-2016 SII_RS03155 973aed7f95467db054022410dd97e09f 452 PANTHER PTHR10629 1 209 1.8E-55 T 22-04-2016 SII_RS07125 f9b1e1e529583269f2de76ba51f89db5 243 PANTHER PTHR24220 3 227 4.1E-81 T 22-04-2016 SII_RS07125 f9b1e1e529583269f2de76ba51f89db5 243 SMART SM00382 26 211 4.7E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain SII_RS07125 f9b1e1e529583269f2de76ba51f89db5 243 SUPERFAMILY SSF52540 2 225 1.11E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS07125 f9b1e1e529583269f2de76ba51f89db5 243 Pfam PF00005 ABC transporter 17 160 9.2E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SII_RS07125 f9b1e1e529583269f2de76ba51f89db5 243 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SII_RS07125 f9b1e1e529583269f2de76ba51f89db5 243 PANTHER PTHR24220:SF160 3 227 4.1E-81 T 22-04-2016 SII_RS07125 f9b1e1e529583269f2de76ba51f89db5 243 Gene3D G3DSA:3.40.50.300 1 227 7.8E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS00405 2e68a83d603d70ee2ac977ebaa890a25 1238 SUPERFAMILY SSF49478 1092 1157 1.1E-5 T 22-04-2016 SII_RS00405 2e68a83d603d70ee2ac977ebaa890a25 1238 Gene3D G3DSA:3.40.50.410 433 638 8.4E-18 T 22-04-2016 IPR002035 von Willebrand factor, type A SII_RS00405 2e68a83d603d70ee2ac977ebaa890a25 1238 SUPERFAMILY SSF53300 433 638 1.41E-21 T 22-04-2016 IPR002035 von Willebrand factor, type A SII_RS00405 2e68a83d603d70ee2ac977ebaa890a25 1238 Gene3D G3DSA:2.60.40.1140 801 928 6.5E-10 T 22-04-2016 IPR008970 Collagen-binding surface protein Cna, B-type domain SII_RS00405 2e68a83d603d70ee2ac977ebaa890a25 1238 SUPERFAMILY SSF49478 801 849 6.47E-5 T 22-04-2016 SII_RS00405 2e68a83d603d70ee2ac977ebaa890a25 1238 SMART SM00327 432 640 1.2E-14 T 22-04-2016 IPR002035 von Willebrand factor, type A SII_RS00405 2e68a83d603d70ee2ac977ebaa890a25 1238 Pfam PF05738 Cna protein B-type domain 1097 1161 8.4E-14 T 22-04-2016 IPR008454 Collagen-binding surface protein Cna-like, B-type domain SII_RS00405 2e68a83d603d70ee2ac977ebaa890a25 1238 Pfam PF13519 von Willebrand factor type A domain 435 549 1.7E-17 T 22-04-2016 IPR002035 von Willebrand factor, type A SII_RS07710 1b780747e327bd46eab06e3d6a2fe524 88 Hamap MF_01054 UPF0237 protein . 1 88 24.701 T 22-04-2016 IPR022986 Uncharacterised protein family UPF0237, ACT-type SII_RS07710 1b780747e327bd46eab06e3d6a2fe524 88 Pfam PF13740 ACT domain 4 75 1.0E-13 T 22-04-2016 SII_RS07710 1b780747e327bd46eab06e3d6a2fe524 88 Gene3D G3DSA:3.30.70.260 1 87 3.4E-31 T 22-04-2016 SII_RS07710 1b780747e327bd46eab06e3d6a2fe524 88 SUPERFAMILY SSF55021 1 82 8.89E-22 T 22-04-2016 SII_RS07710 1b780747e327bd46eab06e3d6a2fe524 88 PANTHER PTHR34875 1 88 8.3E-31 T 22-04-2016 SII_RS01185 320ab03b9c9303bc12794ec0b277df52 784 Pfam PF13538 UvrD-like helicase C-terminal domain 661 707 1.2E-18 T 22-04-2016 IPR027785 UvrD-like helicase C-terminal domain SII_RS01185 320ab03b9c9303bc12794ec0b277df52 784 Gene3D G3DSA:3.40.50.300 297 516 6.0E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS01185 320ab03b9c9303bc12794ec0b277df52 784 Pfam PF14490 Helix-hairpin-helix containing domain 146 236 2.2E-27 T 22-04-2016 IPR029493 RecD helicase-like helix-hairpin-helix domain SII_RS01185 320ab03b9c9303bc12794ec0b277df52 784 Gene3D G3DSA:3.40.50.300 659 716 3.5E-20 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS01185 320ab03b9c9303bc12794ec0b277df52 784 Gene3D G3DSA:3.40.50.300 149 165 3.5E-20 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS01185 320ab03b9c9303bc12794ec0b277df52 784 SUPERFAMILY SSF52540 324 713 2.32E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS01185 320ab03b9c9303bc12794ec0b277df52 784 PANTHER PTHR10887:SF284 179 194 1.4E-112 T 22-04-2016 SII_RS01185 320ab03b9c9303bc12794ec0b277df52 784 PANTHER PTHR10887:SF284 661 720 1.4E-112 T 22-04-2016 SII_RS01185 320ab03b9c9303bc12794ec0b277df52 784 PANTHER PTHR10887:SF284 271 588 1.4E-112 T 22-04-2016 SII_RS01185 320ab03b9c9303bc12794ec0b277df52 784 PANTHER PTHR10887 179 194 1.4E-112 T 22-04-2016 SII_RS01185 320ab03b9c9303bc12794ec0b277df52 784 PANTHER PTHR10887 661 720 1.4E-112 T 22-04-2016 SII_RS01185 320ab03b9c9303bc12794ec0b277df52 784 PANTHER PTHR10887 271 588 1.4E-112 T 22-04-2016 SII_RS01185 320ab03b9c9303bc12794ec0b277df52 784 TIGRFAM TIGR01448 recD_rel: helicase, RecD/TraA family 5 733 1.4E-295 T 22-04-2016 IPR006345 DNA helicase, RecD-like GO:0003677|GO:0032508|GO:0043141 SII_RS01185 320ab03b9c9303bc12794ec0b277df52 784 Pfam PF13604 AAA domain 331 530 3.0E-40 T 22-04-2016 SII_RS01185 320ab03b9c9303bc12794ec0b277df52 784 Hamap MF_01488 ATP-dependent RecD-like DNA helicase [recD2]. 2 736 27.908 T 22-04-2016 IPR006345 DNA helicase, RecD-like GO:0003677|GO:0032508|GO:0043141 SII_RS05105 7ecddc81f77c1210fc7a1948de033aa8 2882 SUPERFAMILY SSF52540 2071 2173 2.75E-31 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS05105 7ecddc81f77c1210fc7a1948de033aa8 2882 SUPERFAMILY SSF52540 1853 2012 2.75E-31 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS05105 7ecddc81f77c1210fc7a1948de033aa8 2882 Gene3D G3DSA:3.40.50.300 1897 2010 7.4E-23 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS05105 7ecddc81f77c1210fc7a1948de033aa8 2882 Gene3D G3DSA:3.40.50.300 2072 2156 7.4E-23 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS05105 7ecddc81f77c1210fc7a1948de033aa8 2882 Gene3D G3DSA:3.40.50.300 2327 2459 4.8E-28 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS05105 7ecddc81f77c1210fc7a1948de033aa8 2882 Gene3D G3DSA:3.40.50.300 56 78 4.8E-28 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS05105 7ecddc81f77c1210fc7a1948de033aa8 2882 SUPERFAMILY SSF52540 2228 2519 1.04E-32 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS05105 7ecddc81f77c1210fc7a1948de033aa8 2882 SMART SM00487 1898 2169 1.1E-9 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain SII_RS05105 7ecddc81f77c1210fc7a1948de033aa8 2882 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 1202 1216 1.0E-7 T 22-04-2016 SII_RS05105 7ecddc81f77c1210fc7a1948de033aa8 2882 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 1287 1311 1.0E-7 T 22-04-2016 SII_RS05105 7ecddc81f77c1210fc7a1948de033aa8 2882 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 1262 1274 1.0E-7 T 22-04-2016 SII_RS05105 7ecddc81f77c1210fc7a1948de033aa8 2882 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 1176 1192 1.0E-7 T 22-04-2016 SII_RS05105 7ecddc81f77c1210fc7a1948de033aa8 2882 SUPERFAMILY SSF53335 1151 1443 1.22E-33 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SII_RS05105 7ecddc81f77c1210fc7a1948de033aa8 2882 Pfam PF00271 Helicase conserved C-terminal domain 2351 2424 5.8E-7 T 22-04-2016 IPR001650 Helicase, C-terminal SII_RS05105 7ecddc81f77c1210fc7a1948de033aa8 2882 Gene3D G3DSA:3.40.50.150 1178 1397 9.8E-51 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SII_RS05105 7ecddc81f77c1210fc7a1948de033aa8 2882 Pfam PF04851 Type III restriction enzyme, res subunit 1899 2104 1.7E-7 T 22-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 SII_RS05105 7ecddc81f77c1210fc7a1948de033aa8 2882 SMART SM00490 2334 2424 1.6E-6 T 22-04-2016 IPR001650 Helicase, C-terminal SII_RS06510 2b1d179969539e76f1ac5921124fd988 175 PANTHER PTHR30295:SF6 6 173 6.4E-52 T 22-04-2016 SII_RS06510 2b1d179969539e76f1ac5921124fd988 175 Gene3D G3DSA:1.20.1260.10 23 172 5.5E-53 T 22-04-2016 IPR012347 Ferritin-related SII_RS06510 2b1d179969539e76f1ac5921124fd988 175 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 74 90 1.4E-13 T 22-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 SII_RS06510 2b1d179969539e76f1ac5921124fd988 175 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 147 165 1.4E-13 T 22-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 SII_RS06510 2b1d179969539e76f1ac5921124fd988 175 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 50 66 1.4E-13 T 22-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 SII_RS06510 2b1d179969539e76f1ac5921124fd988 175 PANTHER PTHR30295 6 173 6.4E-52 T 22-04-2016 SII_RS06510 2b1d179969539e76f1ac5921124fd988 175 SUPERFAMILY SSF47240 20 171 6.5E-46 T 22-04-2016 IPR009078 Ferritin-like superfamily SII_RS06510 2b1d179969539e76f1ac5921124fd988 175 Pfam PF00210 Ferritin-like domain 30 173 2.3E-30 T 22-04-2016 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 SII_RS06510 2b1d179969539e76f1ac5921124fd988 175 PIRSF PIRSF005900 8 174 6.8E-43 T 22-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 SII_RS05045 15e6af3a2be4c5d8cade9fd0ba1c74a2 142 Pfam PF13408 Recombinase zinc beta ribbon domain 7 68 1.9E-12 T 22-04-2016 IPR025827 Recombinase zinc beta ribbon domain SII_RS06145 9ac7935c28f0dfe922ecb070607d7636 662 Pfam PF02687 FtsX-like permease family 62 180 4.7E-11 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 SII_RS06145 9ac7935c28f0dfe922ecb070607d7636 662 PIRSF PIRSF018968 4 662 3.2E-71 T 22-04-2016 IPR027022 ABC transporter permease protein, BceB-type GO:0006810 SII_RS06145 9ac7935c28f0dfe922ecb070607d7636 662 PANTHER PTHR30489 7 660 3.0E-28 T 22-04-2016 SII_RS04345 05f804ef9ad031296394a95480dcafbf 121 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 2 115 1.2E-4 T 22-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain SII_RS04345 05f804ef9ad031296394a95480dcafbf 121 PANTHER PTHR35006 1 119 6.9E-41 T 22-04-2016 SII_RS04345 05f804ef9ad031296394a95480dcafbf 121 SUPERFAMILY SSF54593 2 120 6.6E-19 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SII_RS04345 05f804ef9ad031296394a95480dcafbf 121 Gene3D G3DSA:3.10.180.10 1 119 4.4E-30 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SII_RS03585 9e7f071895585beec081a9b7af2f39d1 412 Pfam PF07690 Major Facilitator Superfamily 24 256 1.3E-29 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SII_RS03585 9e7f071895585beec081a9b7af2f39d1 412 Gene3D G3DSA:1.20.1250.20 218 392 1.0E-22 T 22-04-2016 SII_RS03585 9e7f071895585beec081a9b7af2f39d1 412 SUPERFAMILY SSF103473 5 397 6.67E-70 T 22-04-2016 IPR020846 Major facilitator superfamily domain SII_RS03585 9e7f071895585beec081a9b7af2f39d1 412 PANTHER PTHR23508:SF18 3 411 1.3E-62 T 22-04-2016 SII_RS03585 9e7f071895585beec081a9b7af2f39d1 412 Gene3D G3DSA:1.20.1250.20 8 187 8.2E-29 T 22-04-2016 SII_RS03585 9e7f071895585beec081a9b7af2f39d1 412 PANTHER PTHR23508 3 411 1.3E-62 T 22-04-2016 SII_RS05750 b75f72d1c2526e81a3f98507efb0455c 404 Gene3D G3DSA:3.40.630.30 1 172 3.0E-62 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SII_RS05750 b75f72d1c2526e81a3f98507efb0455c 404 SUPERFAMILY SSF55729 5 163 1.46E-45 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SII_RS05750 b75f72d1c2526e81a3f98507efb0455c 404 PANTHER PTHR36174:SF1 1 404 2.3E-117 T 22-04-2016 SII_RS05750 b75f72d1c2526e81a3f98507efb0455c 404 SUPERFAMILY SSF55729 297 389 1.55E-29 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SII_RS05750 b75f72d1c2526e81a3f98507efb0455c 404 SUPERFAMILY SSF55729 170 240 1.55E-29 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SII_RS05750 b75f72d1c2526e81a3f98507efb0455c 404 Gene3D G3DSA:3.40.630.30 173 239 2.7E-40 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SII_RS05750 b75f72d1c2526e81a3f98507efb0455c 404 Gene3D G3DSA:3.40.630.30 297 371 2.7E-40 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SII_RS05750 b75f72d1c2526e81a3f98507efb0455c 404 Pfam PF02388 FemAB family 8 394 5.5E-131 T 22-04-2016 IPR003447 FemABX peptidyl transferase GO:0009252|GO:0016755 SII_RS05750 b75f72d1c2526e81a3f98507efb0455c 404 PANTHER PTHR36174 1 404 2.3E-117 T 22-04-2016 SII_RS06910 bbc0ec38f55a13bda9b03a350dd95004 243 PANTHER PTHR30294:SF6 1 243 3.3E-65 T 22-04-2016 SII_RS06910 bbc0ec38f55a13bda9b03a350dd95004 243 Pfam PF01061 ABC-2 type transporter 6 206 6.3E-15 T 22-04-2016 IPR013525 ABC-2 type transporter GO:0016020 SII_RS06910 bbc0ec38f55a13bda9b03a350dd95004 243 PIRSF PIRSF006648 2 242 4.5E-16 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 SII_RS06910 bbc0ec38f55a13bda9b03a350dd95004 243 PANTHER PTHR30294 1 243 3.3E-65 T 22-04-2016 SII_RS05845 e65364a583675356f0b7b0de54c449df 342 Gene3D G3DSA:2.40.10.240 64 143 1.9E-31 T 22-04-2016 SII_RS05845 e65364a583675356f0b7b0de54c449df 342 SUPERFAMILY SSF111337 1 341 2.75E-138 T 22-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 SII_RS05845 e65364a583675356f0b7b0de54c449df 342 Pfam PF02547 Queuosine biosynthesis protein 4 341 3.5E-141 T 22-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 SII_RS05845 e65364a583675356f0b7b0de54c449df 342 PANTHER PTHR30307:SF0 2 341 1.1E-179 T 22-04-2016 SII_RS05845 e65364a583675356f0b7b0de54c449df 342 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 1 342 46.333 T 22-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 SII_RS05845 e65364a583675356f0b7b0de54c449df 342 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1 341 1.9E-138 T 22-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 SII_RS05845 e65364a583675356f0b7b0de54c449df 342 Gene3D G3DSA:3.40.1780.10 178 341 8.4E-101 T 22-04-2016 SII_RS05845 e65364a583675356f0b7b0de54c449df 342 Gene3D G3DSA:3.40.1780.10 1 62 8.4E-101 T 22-04-2016 SII_RS05845 e65364a583675356f0b7b0de54c449df 342 PANTHER PTHR30307 2 341 1.1E-179 T 22-04-2016 SII_RS00480 f93c5b181e3d3330b135d01166a921e0 294 SUPERFAMILY SSF53067 2 290 6.31E-56 T 22-04-2016 SII_RS00480 f93c5b181e3d3330b135d01166a921e0 294 Gene3D G3DSA:3.30.420.40 1 136 9.4E-42 T 22-04-2016 SII_RS00480 f93c5b181e3d3330b135d01166a921e0 294 PANTHER PTHR18964:SF109 1 289 4.2E-68 T 22-04-2016 SII_RS00480 f93c5b181e3d3330b135d01166a921e0 294 PANTHER PTHR18964 1 289 4.2E-68 T 22-04-2016 SII_RS00480 f93c5b181e3d3330b135d01166a921e0 294 Gene3D G3DSA:3.30.420.40 137 275 6.0E-35 T 22-04-2016 SII_RS00480 f93c5b181e3d3330b135d01166a921e0 294 Pfam PF00480 ROK family 4 290 3.8E-47 T 22-04-2016 IPR000600 ROK family SII_RS03510 3be35c88f6fe5e28b6247b6153401bf9 165 SUPERFAMILY SSF55781 4 150 2.18E-37 T 22-04-2016 IPR029016 GAF domain-like SII_RS03510 3be35c88f6fe5e28b6247b6153401bf9 165 Gene3D G3DSA:3.30.450.40 5 150 1.4E-44 T 22-04-2016 IPR029016 GAF domain-like SII_RS03510 3be35c88f6fe5e28b6247b6153401bf9 165 PANTHER PTHR21021 1 149 3.5E-43 T 22-04-2016 SII_RS03510 3be35c88f6fe5e28b6247b6153401bf9 165 Pfam PF13185 GAF domain 49 147 3.5E-12 T 22-04-2016 IPR003018 GAF domain GO:0005515 SII_RS04115 3eaeba25bbcb9de2ab1102a2cc2076d4 202 PANTHER PTHR30543:SF6 1 198 1.4E-64 T 22-04-2016 SII_RS04115 3eaeba25bbcb9de2ab1102a2cc2076d4 202 SUPERFAMILY SSF52218 3 173 7.11E-38 T 22-04-2016 IPR029039 Flavoprotein-like domain SII_RS04115 3eaeba25bbcb9de2ab1102a2cc2076d4 202 PANTHER PTHR30543 1 198 1.4E-64 T 22-04-2016 SII_RS04115 3eaeba25bbcb9de2ab1102a2cc2076d4 202 Gene3D G3DSA:3.40.50.360 1 183 1.2E-44 T 22-04-2016 IPR029039 Flavoprotein-like domain SII_RS04115 3eaeba25bbcb9de2ab1102a2cc2076d4 202 Pfam PF03358 NADPH-dependent FMN reductase 3 147 1.1E-32 T 22-04-2016 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 SII_RS09270 0958273e7b638035bdd9cd64d5bc7e41 422 Pfam PF04915 DltD N-terminal region 37 98 3.4E-24 T 22-04-2016 IPR006999 DltD, N-terminal UniPathway: UPA00556 SII_RS09270 0958273e7b638035bdd9cd64d5bc7e41 422 Pfam PF04918 DltD central region 99 263 9.3E-50 T 22-04-2016 IPR007002 DltD, central domain UniPathway: UPA00556 SII_RS09270 0958273e7b638035bdd9cd64d5bc7e41 422 Pfam PF04914 DltD C-terminal region 266 392 9.7E-52 T 22-04-2016 IPR006998 DltD, C-terminal UniPathway: UPA00556 SII_RS09270 0958273e7b638035bdd9cd64d5bc7e41 422 TIGRFAM TIGR04092 LTA_DltD: D-alanyl-lipoteichoic acid biosynthesis protein DltD 9 391 2.3E-132 T 22-04-2016 IPR023896 D-alanyl-lipoteichoic acid biosynthesis DltD UniPathway: UPA00556 SII_RS09270 0958273e7b638035bdd9cd64d5bc7e41 422 PIRSF PIRSF021438 1 394 3.3E-124 T 22-04-2016 IPR023896 D-alanyl-lipoteichoic acid biosynthesis DltD UniPathway: UPA00556 SII_RS09270 0958273e7b638035bdd9cd64d5bc7e41 422 PANTHER PTHR40039:SF1 2 422 1.7E-130 T 22-04-2016 SII_RS09270 0958273e7b638035bdd9cd64d5bc7e41 422 PANTHER PTHR40039 2 422 1.7E-130 T 22-04-2016 SII_RS01175 86d5fe3efffba3efb358395e78283d7b 771 SUPERFAMILY SSF51998 11 763 6.87E-201 T 22-04-2016 SII_RS01175 86d5fe3efffba3efb358395e78283d7b 771 PIRSF PIRSF000379 13 764 1.6E-287 T 22-04-2016 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493|UniPathway: UPA00920 SII_RS01175 86d5fe3efffba3efb358395e78283d7b 771 Pfam PF01228 Glycine radical 643 743 4.8E-23 T 22-04-2016 IPR001150 Glycine radical domain GO:0003824|GO:0008152 SII_RS01175 86d5fe3efffba3efb358395e78283d7b 771 PANTHER PTHR30191 1 764 0.0 T 22-04-2016 SII_RS01175 86d5fe3efffba3efb358395e78283d7b 771 Gene3D G3DSA:3.20.70.20 10 763 6.0E-231 T 22-04-2016 SII_RS01175 86d5fe3efffba3efb358395e78283d7b 771 TIGRFAM TIGR01255 pyr_form_ly_1: formate acetyltransferase 16 764 0.0 T 22-04-2016 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493|UniPathway: UPA00920 SII_RS01175 86d5fe3efffba3efb358395e78283d7b 771 Pfam PF02901 Pyruvate formate lyase-like 32 614 5.3E-148 T 22-04-2016 IPR004184 Pyruvate formate lyase domain GO:0003824 SII_RS01175 86d5fe3efffba3efb358395e78283d7b 771 ProSitePatterns PS00850 Glycine radical domain signature. 734 742 - T 22-04-2016 IPR019777 Formate C-acetyltransferase glycine radical, conserved site SII_RS01175 86d5fe3efffba3efb358395e78283d7b 771 PANTHER PTHR30191:SF0 1 764 0.0 T 22-04-2016 SII_RS05445 f3acdf5dba76b016bbb99412e2105dd3 280 PANTHER PTHR37308 1 278 7.5E-70 T 22-04-2016 SII_RS05445 f3acdf5dba76b016bbb99412e2105dd3 280 Pfam PF04018 Domain of unknown function (DUF368) 19 235 1.9E-32 T 22-04-2016 IPR007163 Protein of unknown function DUF368 SII_RS03790 bbcdf574354861f4e08b3ed1fc7b1753 302 Pfam PF03631 Virulence factor BrkB 25 276 8.2E-45 T 22-04-2016 IPR017039 Virulence factor BrkB SII_RS03790 bbcdf574354861f4e08b3ed1fc7b1753 302 PANTHER PTHR30213:SF1 13 286 2.0E-43 T 22-04-2016 SII_RS03790 bbcdf574354861f4e08b3ed1fc7b1753 302 PIRSF PIRSF035875 2 298 1.9E-60 T 22-04-2016 IPR017039 Virulence factor BrkB SII_RS03790 bbcdf574354861f4e08b3ed1fc7b1753 302 PANTHER PTHR30213 13 286 2.0E-43 T 22-04-2016 SII_RS04950 bb00b05bab36bcad37ad84c77d3ed593 283 PANTHER PTHR10491:SF4 1 280 2.9E-94 T 22-04-2016 SII_RS04950 bb00b05bab36bcad37ad84c77d3ed593 283 Gene3D G3DSA:3.40.50.720 2 230 1.7E-61 T 22-04-2016 IPR016040 NAD(P)-binding domain SII_RS04950 bb00b05bab36bcad37ad84c77d3ed593 283 Pfam PF04321 RmlD substrate binding domain 2 280 5.7E-106 T 22-04-2016 IPR029903 RmlD-like substrate binding domain SII_RS04950 bb00b05bab36bcad37ad84c77d3ed593 283 TIGRFAM TIGR01214 rmlD: dTDP-4-dehydrorhamnose reductase 2 277 2.3E-81 T 22-04-2016 IPR005913 dTDP-4-dehydrorhamnose reductase family SII_RS04950 bb00b05bab36bcad37ad84c77d3ed593 283 SUPERFAMILY SSF51735 2 279 1.18E-83 T 22-04-2016 IPR016040 NAD(P)-binding domain SII_RS04950 bb00b05bab36bcad37ad84c77d3ed593 283 PANTHER PTHR10491 1 280 2.9E-94 T 22-04-2016 IPR005913 dTDP-4-dehydrorhamnose reductase family SII_RS00045 93a56cf763d6788b23aefaf8ac27da54 122 Pfam PF04977 Septum formation initiator 42 117 7.7E-19 T 22-04-2016 IPR007060 Septum formation initiator FtsL/DivIC GO:0007049 SII_RS00045 93a56cf763d6788b23aefaf8ac27da54 122 PANTHER PTHR40027 1 117 5.1E-29 T 22-04-2016 SII_RS02910 96903381fe51daa0df7c8de79ec578d5 257 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 1 252 18.183 T 22-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 SII_RS02910 96903381fe51daa0df7c8de79ec578d5 257 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 3 248 7.5E-69 T 22-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 SII_RS02910 96903381fe51daa0df7c8de79ec578d5 257 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 4 247 4.0E-79 T 22-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 SII_RS02910 96903381fe51daa0df7c8de79ec578d5 257 PANTHER PTHR30589 2 257 3.6E-105 T 22-04-2016 SII_RS02910 96903381fe51daa0df7c8de79ec578d5 257 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 130 142 - T 22-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 SII_RS02910 96903381fe51daa0df7c8de79ec578d5 257 PANTHER PTHR30589:SF0 2 257 3.6E-105 T 22-04-2016 SII_RS05080 df85cd54e297333ea0557bdb2f2660cc 116 Pfam PF05713 Bacterial mobilisation protein (MobC) 66 104 1.2E-7 T 22-04-2016 IPR008687 Bacterial mobilisation SII_RS05315 705ddc3bfe39d0360f0b4f6450327632 354 Pfam PF13791 Sigma factor regulator C-terminal 167 340 3.7E-24 T 22-04-2016 IPR025672 Sigma factor regulator C-terminal domain SII_RS03035 96ce845fd2a47c546acbb760894e6e99 119 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 23 70 8.0E-14 T 22-04-2016 SII_RS03035 96ce845fd2a47c546acbb760894e6e99 119 PANTHER PTHR10986 2 118 1.8E-65 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 SII_RS03035 96ce845fd2a47c546acbb760894e6e99 119 SUPERFAMILY SSF74731 3 116 1.83E-49 T 22-04-2016 SII_RS03035 96ce845fd2a47c546acbb760894e6e99 119 Pfam PF00453 Ribosomal protein L20 3 109 2.1E-49 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 SII_RS03035 96ce845fd2a47c546acbb760894e6e99 119 PANTHER PTHR10986:SF12 2 118 1.8E-65 T 22-04-2016 SII_RS03035 96ce845fd2a47c546acbb760894e6e99 119 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 9.4E-51 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 SII_RS03035 96ce845fd2a47c546acbb760894e6e99 119 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 SII_RS03035 96ce845fd2a47c546acbb760894e6e99 119 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 30.431 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 SII_RS03035 96ce845fd2a47c546acbb760894e6e99 119 PRINTS PR00062 Ribosomal protein L20 signature 42 71 3.7E-41 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 SII_RS03035 96ce845fd2a47c546acbb760894e6e99 119 PRINTS PR00062 Ribosomal protein L20 signature 75 101 3.7E-41 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 SII_RS03035 96ce845fd2a47c546acbb760894e6e99 119 PRINTS PR00062 Ribosomal protein L20 signature 12 41 3.7E-41 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 SII_RS03035 96ce845fd2a47c546acbb760894e6e99 119 Gene3D G3DSA:1.10.1900.20 55 117 5.6E-32 T 22-04-2016 SII_RS00210 d8b47446397a049b80b4810732c54904 257 PANTHER PTHR33991 3 254 1.9E-51 T 22-04-2016 SII_RS00210 d8b47446397a049b80b4810732c54904 257 SUPERFAMILY SSF57863 81 233 2.07E-37 T 22-04-2016 SII_RS00210 d8b47446397a049b80b4810732c54904 257 Hamap MF_00201 DNA repair protein RecO [recO]. 3 244 24.794 T 22-04-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 SII_RS00210 d8b47446397a049b80b4810732c54904 257 Pfam PF11967 Recombination protein O N terminal 4 74 3.4E-16 T 22-04-2016 IPR022572 DNA replication/recombination mediator RecO, N-terminal SII_RS00210 d8b47446397a049b80b4810732c54904 257 Pfam PF02565 Recombination protein O C terminal 84 238 9.7E-37 T 22-04-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 SII_RS00210 d8b47446397a049b80b4810732c54904 257 TIGRFAM TIGR00613 reco: DNA repair protein RecO 6 243 1.3E-73 T 22-04-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 SII_RS00210 d8b47446397a049b80b4810732c54904 257 Gene3D G3DSA:2.40.50.140 5 82 1.1E-7 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SII_RS00210 d8b47446397a049b80b4810732c54904 257 SUPERFAMILY SSF50249 4 78 1.22E-12 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SII_RS08965 04a3ae56697aabe03f9c05a0619597fa 101 PANTHER PTHR40066:SF1 1 101 6.3E-30 T 22-04-2016 SII_RS08965 04a3ae56697aabe03f9c05a0619597fa 101 PANTHER PTHR40066 1 101 6.3E-30 T 22-04-2016 SII_RS08965 04a3ae56697aabe03f9c05a0619597fa 101 Pfam PF06949 Protein of unknown function (DUF1292) 20 100 5.2E-16 T 22-04-2016 IPR009711 Uncharacterised protein family UPF0473 SII_RS08965 04a3ae56697aabe03f9c05a0619597fa 101 Hamap MF_01448 UPF0473 protein . 11 101 23.065 T 22-04-2016 IPR009711 Uncharacterised protein family UPF0473 SII_RS07375 1387a05a58b380cb185fb4a20d31421a 368 Pfam PF01926 50S ribosome-binding GTPase 166 228 1.9E-13 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 SII_RS07375 1387a05a58b380cb185fb4a20d31421a 368 SUPERFAMILY SSF52540 64 280 3.82E-32 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS07375 1387a05a58b380cb185fb4a20d31421a 368 PANTHER PTHR11089:SF34 1 368 2.5E-205 T 22-04-2016 SII_RS07375 1387a05a58b380cb185fb4a20d31421a 368 TIGRFAM TIGR03597 GTPase_YqeH: ribosome biogenesis GTPase YqeH 6 368 2.4E-154 T 22-04-2016 IPR019988 GTP-binding protein, riobosome biogenesis, YqeH SII_RS07375 1387a05a58b380cb185fb4a20d31421a 368 PANTHER PTHR11089 1 368 2.5E-205 T 22-04-2016 SII_RS07375 1387a05a58b380cb185fb4a20d31421a 368 Gene3D G3DSA:3.40.50.300 72 224 4.1E-30 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS06635 85b4587b2a2b76a333ee93080c83b6b6 77 Gene3D G3DSA:1.10.3910.10 1 75 8.1E-32 T 22-04-2016 IPR015077 Domain of unknown function DUF1858 SII_RS06635 85b4587b2a2b76a333ee93080c83b6b6 77 SUPERFAMILY SSF140683 1 75 6.67E-21 T 22-04-2016 SII_RS06635 85b4587b2a2b76a333ee93080c83b6b6 77 Pfam PF08984 Domain of unknown function (DUF1858) 5 63 3.2E-18 T 22-04-2016 IPR015077 Domain of unknown function DUF1858 SII_RS05050 dff20a2031f0428c6ca448199f3d7f80 558 Pfam PF00239 Resolvase, N terminal domain 8 158 2.1E-35 T 22-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 SII_RS05050 dff20a2031f0428c6ca448199f3d7f80 558 PANTHER PTHR30461:SF3 2 498 2.7E-140 T 22-04-2016 SII_RS05050 dff20a2031f0428c6ca448199f3d7f80 558 Pfam PF07508 Recombinase 178 290 1.6E-17 T 22-04-2016 IPR011109 DNA-binding recombinase domain GO:0000150|GO:0003677 SII_RS05050 dff20a2031f0428c6ca448199f3d7f80 558 SUPERFAMILY SSF53041 7 158 2.49E-35 T 22-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 SII_RS05050 dff20a2031f0428c6ca448199f3d7f80 558 Gene3D G3DSA:3.40.50.1390 7 141 1.2E-31 T 22-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 SII_RS05050 dff20a2031f0428c6ca448199f3d7f80 558 PANTHER PTHR30461 2 498 2.7E-140 T 22-04-2016 SII_RS05050 dff20a2031f0428c6ca448199f3d7f80 558 Pfam PF13408 Recombinase zinc beta ribbon domain 309 376 4.4E-12 T 22-04-2016 IPR025827 Recombinase zinc beta ribbon domain SII_RS05050 dff20a2031f0428c6ca448199f3d7f80 558 SMART SM00857 8 158 8.1E-51 T 22-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 SII_RS04615 1101684b530cdd2d40bc213d4b4426cd 195 Pfam PF01926 50S ribosome-binding GTPase 27 145 7.2E-21 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 SII_RS04615 1101684b530cdd2d40bc213d4b4426cd 195 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 9 191 8.1E-73 T 22-04-2016 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0000917|GO:0005525 SII_RS04615 1101684b530cdd2d40bc213d4b4426cd 195 SUPERFAMILY SSF52540 4 194 2.02E-38 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS04615 1101684b530cdd2d40bc213d4b4426cd 195 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 13 195 29.326 T 22-04-2016 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0000917|GO:0005525 SII_RS04615 1101684b530cdd2d40bc213d4b4426cd 195 Gene3D G3DSA:3.40.50.300 7 193 1.5E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS04615 1101684b530cdd2d40bc213d4b4426cd 195 PANTHER PTHR11649 6 195 3.8E-55 T 22-04-2016 SII_RS02690 88f1c81342c2b6f1e60612cc1b9862cc 292 PANTHER PTHR13767:SF2 1 291 2.7E-114 T 22-04-2016 SII_RS02690 88f1c81342c2b6f1e60612cc1b9862cc 292 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 178 222 6.6E-9 T 22-04-2016 IPR032819 tRNA pseudouridylate synthase B, C-terminal SII_RS02690 88f1c81342c2b6f1e60612cc1b9862cc 292 SUPERFAMILY SSF55120 1 233 2.88E-76 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 SII_RS02690 88f1c81342c2b6f1e60612cc1b9862cc 292 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 1 291 18.601 T 22-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 SII_RS02690 88f1c81342c2b6f1e60612cc1b9862cc 292 PANTHER PTHR13767 1 291 2.7E-114 T 22-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 SII_RS02690 88f1c81342c2b6f1e60612cc1b9862cc 292 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 1 215 3.3E-75 T 22-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 SII_RS02690 88f1c81342c2b6f1e60612cc1b9862cc 292 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 23 177 5.2E-55 T 22-04-2016 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 SII_RS07010 4535ef421d698037948e420a1f1d48e2 451 Pfam PF02386 Cation transport protein 37 435 5.9E-58 T 22-04-2016 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 SII_RS07010 4535ef421d698037948e420a1f1d48e2 451 PANTHER PTHR32024:SF1 1 451 1.2E-134 T 22-04-2016 SII_RS07010 4535ef421d698037948e420a1f1d48e2 451 PANTHER PTHR32024 1 451 1.2E-134 T 22-04-2016 SII_RS08370 4e149cdfa7e2e8ff4d95282db64b3568 128 Pfam PF07006 Protein of unknown function (DUF1310) 9 123 2.1E-34 T 22-04-2016 IPR010738 Protein of unknown function DUF1310 SII_RS08370 4e149cdfa7e2e8ff4d95282db64b3568 128 Gene3D G3DSA:3.10.450.130 70 127 9.4E-6 T 22-04-2016 SII_RS09090 0b1a82b9331b52bb433db4a501acb52f 431 SUPERFAMILY SSF161098 173 417 1.18E-46 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SII_RS09090 0b1a82b9331b52bb433db4a501acb52f 431 PANTHER PTHR30193 98 431 3.1E-209 T 22-04-2016 SII_RS09090 0b1a82b9331b52bb433db4a501acb52f 431 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 206 427 2.1E-27 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SII_RS09090 0b1a82b9331b52bb433db4a501acb52f 431 Gene3D G3DSA:1.20.58.370 122 156 3.1E-4 T 22-04-2016 SII_RS09090 0b1a82b9331b52bb433db4a501acb52f 431 SUPERFAMILY SSF160964 72 175 1.31E-7 T 22-04-2016 SII_RS09090 0b1a82b9331b52bb433db4a501acb52f 431 PANTHER PTHR30193:SF17 98 431 3.1E-209 T 22-04-2016 SII_RS09090 0b1a82b9331b52bb433db4a501acb52f 431 Gene3D G3DSA:1.10.3720.10 185 423 8.5E-56 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SII_RS01885 7dcbc80193097fc7ddff61feda837006 449 SUPERFAMILY SSF51735 228 366 2.3E-20 T 22-04-2016 IPR016040 NAD(P)-binding domain SII_RS01885 7dcbc80193097fc7ddff61feda837006 449 Gene3D G3DSA:3.30.70.1450 151 220 1.9E-8 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SII_RS01885 7dcbc80193097fc7ddff61feda837006 449 Gene3D G3DSA:3.30.70.1450 381 447 2.1E-5 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SII_RS01885 7dcbc80193097fc7ddff61feda837006 449 Pfam PF02254 TrkA-N domain 3 121 2.3E-24 T 22-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 SII_RS01885 7dcbc80193097fc7ddff61feda837006 449 Pfam PF02254 TrkA-N domain 229 344 3.2E-17 T 22-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 SII_RS01885 7dcbc80193097fc7ddff61feda837006 449 PRINTS PR00335 TrkA potassium uptake protein signature 19 33 2.5E-11 T 22-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 SII_RS01885 7dcbc80193097fc7ddff61feda837006 449 PRINTS PR00335 TrkA potassium uptake protein signature 73 87 2.5E-11 T 22-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 SII_RS01885 7dcbc80193097fc7ddff61feda837006 449 PRINTS PR00335 TrkA potassium uptake protein signature 49 59 2.5E-11 T 22-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 SII_RS01885 7dcbc80193097fc7ddff61feda837006 449 PRINTS PR00335 TrkA potassium uptake protein signature 2 16 2.5E-11 T 22-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 SII_RS01885 7dcbc80193097fc7ddff61feda837006 449 PANTHER PTHR13789:SF225 1 448 1.6E-41 T 22-04-2016 SII_RS01885 7dcbc80193097fc7ddff61feda837006 449 Pfam PF02080 TrkA-C domain 152 216 1.0E-11 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SII_RS01885 7dcbc80193097fc7ddff61feda837006 449 Pfam PF02080 TrkA-C domain 383 447 2.0E-8 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SII_RS01885 7dcbc80193097fc7ddff61feda837006 449 SUPERFAMILY SSF116726 369 447 1.29E-9 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SII_RS01885 7dcbc80193097fc7ddff61feda837006 449 PANTHER PTHR13789 1 448 1.6E-41 T 22-04-2016 SII_RS01885 7dcbc80193097fc7ddff61feda837006 449 SUPERFAMILY SSF116726 134 216 2.88E-12 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SII_RS01885 7dcbc80193097fc7ddff61feda837006 449 Gene3D G3DSA:3.40.50.720 226 358 1.2E-24 T 22-04-2016 IPR016040 NAD(P)-binding domain SII_RS01885 7dcbc80193097fc7ddff61feda837006 449 Gene3D G3DSA:3.40.50.720 1 149 1.4E-39 T 22-04-2016 IPR016040 NAD(P)-binding domain SII_RS01885 7dcbc80193097fc7ddff61feda837006 449 SUPERFAMILY SSF51735 1 149 3.41E-33 T 22-04-2016 IPR016040 NAD(P)-binding domain SII_RS05740 8bbd3b5a78bc4ff6faad1bdc7cec8cd3 439 SMART SM00471 49 181 9.4E-10 T 22-04-2016 IPR003607 HD/PDEase domain SII_RS05740 8bbd3b5a78bc4ff6faad1bdc7cec8cd3 439 SUPERFAMILY SSF109604 2 428 1.55E-125 T 22-04-2016 SII_RS05740 8bbd3b5a78bc4ff6faad1bdc7cec8cd3 439 Pfam PF01966 HD domain 53 174 1.4E-10 T 22-04-2016 IPR006674 HD domain SII_RS05740 8bbd3b5a78bc4ff6faad1bdc7cec8cd3 439 Gene3D G3DSA:1.10.3210.10 3 254 2.4E-84 T 22-04-2016 IPR006674 HD domain SII_RS05740 8bbd3b5a78bc4ff6faad1bdc7cec8cd3 439 PANTHER PTHR11373 1 334 3.0E-94 T 22-04-2016 SII_RS02740 95d1bcdf341519f673434e06ebd47670 252 PANTHER PTHR24220 7 249 1.2E-122 T 22-04-2016 SII_RS02740 95d1bcdf341519f673434e06ebd47670 252 SMART SM00382 30 240 6.7E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain SII_RS02740 95d1bcdf341519f673434e06ebd47670 252 PANTHER PTHR24220:SF585 7 249 1.2E-122 T 22-04-2016 SII_RS02740 95d1bcdf341519f673434e06ebd47670 252 Gene3D G3DSA:3.40.50.300 4 246 7.4E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS02740 95d1bcdf341519f673434e06ebd47670 252 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SII_RS02740 95d1bcdf341519f673434e06ebd47670 252 Pfam PF00005 ABC transporter 21 177 5.3E-33 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SII_RS02740 95d1bcdf341519f673434e06ebd47670 252 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 6 252 2.5E-116 T 22-04-2016 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 SII_RS02740 95d1bcdf341519f673434e06ebd47670 252 SUPERFAMILY SSF52540 3 236 7.23E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS01440 64463c7a45d150f08ca901a927d60b33 914 PANTHER PTHR22683:SF1 504 787 9.1E-225 T 22-04-2016 SII_RS01440 64463c7a45d150f08ca901a927d60b33 914 Pfam PF01580 FtsK/SpoIIIE family 421 621 4.6E-21 T 22-04-2016 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 SII_RS01440 64463c7a45d150f08ca901a927d60b33 914 Pfam PF01580 FtsK/SpoIIIE family 67 306 5.5E-31 T 22-04-2016 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 SII_RS01440 64463c7a45d150f08ca901a927d60b33 914 Gene3D G3DSA:3.40.50.300 75 292 3.1E-32 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS01440 64463c7a45d150f08ca901a927d60b33 914 Gene3D G3DSA:3.40.50.300 424 621 7.0E-8 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS01440 64463c7a45d150f08ca901a927d60b33 914 PANTHER PTHR22683 504 787 9.1E-225 T 22-04-2016 SII_RS01440 64463c7a45d150f08ca901a927d60b33 914 PANTHER PTHR22683 821 911 9.1E-225 T 22-04-2016 SII_RS01440 64463c7a45d150f08ca901a927d60b33 914 TIGRFAM TIGR03928 T7_EssCb_Firm: type VII secretion protein EssC 2 912 0.0 T 22-04-2016 IPR023839 Firmicutes EssC, C-terminal SII_RS01440 64463c7a45d150f08ca901a927d60b33 914 SUPERFAMILY SSF52540 418 626 4.47E-8 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS01440 64463c7a45d150f08ca901a927d60b33 914 PANTHER PTHR22683 1 320 9.1E-225 T 22-04-2016 SII_RS01440 64463c7a45d150f08ca901a927d60b33 914 SUPERFAMILY SSF52540 53 315 3.98E-31 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS01440 64463c7a45d150f08ca901a927d60b33 914 PANTHER PTHR22683:SF1 1 320 9.1E-225 T 22-04-2016 SII_RS01440 64463c7a45d150f08ca901a927d60b33 914 PANTHER PTHR22683:SF1 821 911 9.1E-225 T 22-04-2016 SII_RS01145 eb756427ee63507b13d00d03425d7faf 332 Pfam PF00288 GHMP kinases N terminal domain 101 157 3.9E-10 T 22-04-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 SII_RS01145 eb756427ee63507b13d00d03425d7faf 332 Pfam PF08544 GHMP kinases C terminal 266 322 1.4E-4 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain SII_RS01145 eb756427ee63507b13d00d03425d7faf 332 SUPERFAMILY SSF55060 197 328 1.03E-26 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain SII_RS01145 eb756427ee63507b13d00d03425d7faf 332 Gene3D G3DSA:3.30.70.890 199 329 6.8E-35 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain SII_RS01145 eb756427ee63507b13d00d03425d7faf 332 Gene3D G3DSA:3.30.230.10 4 191 5.6E-66 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SII_RS01145 eb756427ee63507b13d00d03425d7faf 332 TIGRFAM TIGR01220 Pmev_kin_Gr_pos: phosphomevalonate kinase 5 325 4.2E-50 T 22-04-2016 IPR005917 Phosphomevalonate kinase, Gram-positive KEGG: 00900+2.7.4.2|MetaCyc: PWY-7391|MetaCyc: PWY-922|UniPathway: UPA00057 SII_RS01145 eb756427ee63507b13d00d03425d7faf 332 SUPERFAMILY SSF54211 4 194 8.35E-44 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SII_RS02355 fa0f9c1fa4462e151ef5d294dcd98bfe 379 SUPERFAMILY SSF51161 293 370 5.8E-13 T 22-04-2016 IPR011004 Trimeric LpxA-like SII_RS02355 fa0f9c1fa4462e151ef5d294dcd98bfe 379 TIGRFAM TIGR02092 glgD: glucose-1-phosphate adenylyltransferase, GlgD subunit 4 373 3.3E-142 T 22-04-2016 IPR011832 Glucose-1-phosphate adenylyltransferase, GlgD subunit GO:0005978 SII_RS02355 fa0f9c1fa4462e151ef5d294dcd98bfe 379 PANTHER PTHR22572 6 378 3.8E-139 T 22-04-2016 SII_RS02355 fa0f9c1fa4462e151ef5d294dcd98bfe 379 Gene3D G3DSA:3.90.550.10 19 268 2.2E-34 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SII_RS02355 fa0f9c1fa4462e151ef5d294dcd98bfe 379 Gene3D G3DSA:3.90.550.10 305 348 2.2E-34 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SII_RS02355 fa0f9c1fa4462e151ef5d294dcd98bfe 379 PANTHER PTHR22572:SF9 6 378 3.8E-139 T 22-04-2016 IPR011832 Glucose-1-phosphate adenylyltransferase, GlgD subunit GO:0005978 SII_RS02355 fa0f9c1fa4462e151ef5d294dcd98bfe 379 SUPERFAMILY SSF53448 322 339 2.01E-32 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SII_RS02355 fa0f9c1fa4462e151ef5d294dcd98bfe 379 SUPERFAMILY SSF53448 21 261 2.01E-32 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SII_RS02355 fa0f9c1fa4462e151ef5d294dcd98bfe 379 Pfam PF00483 Nucleotidyl transferase 22 222 3.5E-10 T 22-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 SII_RS09250 536b6b58f0ed8abddaf41dbd8101746e 198 PANTHER PTHR10429:SF0 1 192 2.1E-49 T 22-04-2016 SII_RS09250 536b6b58f0ed8abddaf41dbd8101746e 198 TIGRFAM TIGR00567 3mg: DNA-3-methyladenine glycosylase 9 176 6.8E-43 T 22-04-2016 IPR003180 Methylpurine-DNA glycosylase (MPG) GO:0003677|GO:0003905|GO:0006284 SII_RS09250 536b6b58f0ed8abddaf41dbd8101746e 198 Gene3D G3DSA:3.10.300.10 8 180 4.4E-50 T 22-04-2016 IPR003180 Methylpurine-DNA glycosylase (MPG) GO:0003677|GO:0003905|GO:0006284 SII_RS09250 536b6b58f0ed8abddaf41dbd8101746e 198 Hamap MF_00527 Putative 3-methyladenine DNA glycosylase. 4 176 25.102 T 22-04-2016 IPR003180 Methylpurine-DNA glycosylase (MPG) GO:0003677|GO:0003905|GO:0006284 SII_RS09250 536b6b58f0ed8abddaf41dbd8101746e 198 Pfam PF02245 Methylpurine-DNA glycosylase (MPG) 11 173 6.4E-42 T 22-04-2016 IPR003180 Methylpurine-DNA glycosylase (MPG) GO:0003677|GO:0003905|GO:0006284 SII_RS09250 536b6b58f0ed8abddaf41dbd8101746e 198 SUPERFAMILY SSF50486 9 180 4.39E-48 T 22-04-2016 IPR011034 Formyl transferase, C-terminal-like GO:0003824 SII_RS09250 536b6b58f0ed8abddaf41dbd8101746e 198 PANTHER PTHR10429 1 192 2.1E-49 T 22-04-2016 IPR003180 Methylpurine-DNA glycosylase (MPG) GO:0003677|GO:0003905|GO:0006284 SII_RS04725 0f582b50c590b5a5d9568b58671b588d 104 Pfam PF00829 Ribosomal prokaryotic L21 protein 4 102 3.3E-36 T 22-04-2016 IPR028909 Ribosomal protein L21-like GO:0005840 SII_RS04725 0f582b50c590b5a5d9568b58671b588d 104 ProSitePatterns PS01169 Ribosomal protein L21 signature. 73 95 - T 22-04-2016 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SII_RS04725 0f582b50c590b5a5d9568b58671b588d 104 SUPERFAMILY SSF141091 4 103 9.16E-36 T 22-04-2016 IPR028909 Ribosomal protein L21-like GO:0005840 SII_RS04725 0f582b50c590b5a5d9568b58671b588d 104 PANTHER PTHR21349 4 102 5.1E-40 T 22-04-2016 SII_RS04725 0f582b50c590b5a5d9568b58671b588d 104 TIGRFAM TIGR00061 L21: ribosomal protein bL21 4 102 2.9E-35 T 22-04-2016 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SII_RS04725 0f582b50c590b5a5d9568b58671b588d 104 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 3 104 25.101 T 22-04-2016 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SII_RS04995 863c684111b3c992206b1c2970bf9874 228 SMART SM00448 2 112 1.7E-34 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SII_RS04995 863c684111b3c992206b1c2970bf9874 228 Gene3D G3DSA:3.40.50.2300 2 127 7.5E-34 T 22-04-2016 SII_RS04995 863c684111b3c992206b1c2970bf9874 228 Pfam PF00486 Transcriptional regulatory protein, C terminal 153 225 4.9E-17 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SII_RS04995 863c684111b3c992206b1c2970bf9874 228 PANTHER PTHR26402:SF50 2 228 5.0E-60 T 22-04-2016 SII_RS04995 863c684111b3c992206b1c2970bf9874 228 Gene3D G3DSA:1.10.10.10 136 227 6.0E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SII_RS04995 863c684111b3c992206b1c2970bf9874 228 SMART SM00862 152 226 3.8E-16 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SII_RS04995 863c684111b3c992206b1c2970bf9874 228 PANTHER PTHR26402 2 228 5.0E-60 T 22-04-2016 SII_RS04995 863c684111b3c992206b1c2970bf9874 228 Pfam PF00072 Response regulator receiver domain 4 112 4.3E-26 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SII_RS04995 863c684111b3c992206b1c2970bf9874 228 SUPERFAMILY SSF52172 1 176 2.99E-33 T 22-04-2016 IPR011006 CheY-like superfamily SII_RS01330 90d6edb20ab571d78df91aef012738d8 381 SUPERFAMILY SSF51726 8 381 1.44E-54 T 22-04-2016 SII_RS01330 90d6edb20ab571d78df91aef012738d8 381 PANTHER PTHR30519 9 381 7.6E-64 T 22-04-2016 SII_RS01330 90d6edb20ab571d78df91aef012738d8 381 Gene3D G3DSA:3.20.20.210 6 381 9.8E-82 T 22-04-2016 SII_RS01330 90d6edb20ab571d78df91aef012738d8 381 PANTHER PTHR30519:SF3 9 381 7.6E-64 T 22-04-2016 SII_RS00705 5e9fa5a3e92e31c181ba5ba82b9b0b49 272 SUPERFAMILY SSF58113 57 185 2.75E-5 T 22-04-2016 SII_RS03650 0687d5025ab8a866e760e94a9df132c9 188 PANTHER PTHR13256 3 186 3.9E-79 T 22-04-2016 SII_RS03650 0687d5025ab8a866e760e94a9df132c9 188 Pfam PF13302 Acetyltransferase (GNAT) domain 18 154 3.0E-33 T 22-04-2016 IPR000182 GNAT domain GO:0008080 SII_RS03650 0687d5025ab8a866e760e94a9df132c9 188 SUPERFAMILY SSF55729 13 156 4.53E-41 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SII_RS03650 0687d5025ab8a866e760e94a9df132c9 188 PANTHER PTHR13256:SF31 3 186 3.9E-79 T 22-04-2016 SII_RS03650 0687d5025ab8a866e760e94a9df132c9 188 Gene3D G3DSA:3.40.630.30 13 185 1.8E-47 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SII_RS08665 276c8c57559a4198046bc194d160701e 312 PANTHER PTHR32108:SF0 1 312 1.0E-133 T 22-04-2016 SII_RS08665 276c8c57559a4198046bc194d160701e 312 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 239 302 5.5E-27 T 22-04-2016 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SII_RS08665 276c8c57559a4198046bc194d160701e 312 Gene3D G3DSA:3.30.1360.10 2 55 1.0E-10 T 22-04-2016 SII_RS08665 276c8c57559a4198046bc194d160701e 312 Gene3D G3DSA:2.170.120.12 56 168 9.8E-46 T 22-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SII_RS08665 276c8c57559a4198046bc194d160701e 312 SUPERFAMILY SSF47789 246 311 5.1E-23 T 22-04-2016 SII_RS08665 276c8c57559a4198046bc194d160701e 312 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 24 219 4.4E-21 T 22-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SII_RS08665 276c8c57559a4198046bc194d160701e 312 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 251 309 2.0E-26 T 22-04-2016 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SII_RS08665 276c8c57559a4198046bc194d160701e 312 PANTHER PTHR32108 1 312 1.0E-133 T 22-04-2016 SII_RS08665 276c8c57559a4198046bc194d160701e 312 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 54 150 3.1E-24 T 22-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SII_RS08665 276c8c57559a4198046bc194d160701e 312 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 1 311 35.93 T 22-04-2016 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SII_RS08665 276c8c57559a4198046bc194d160701e 312 SMART SM00662 18 225 1.7E-89 T 22-04-2016 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SII_RS08665 276c8c57559a4198046bc194d160701e 312 Gene3D G3DSA:1.10.150.20 244 311 1.4E-31 T 22-04-2016 SII_RS08665 276c8c57559a4198046bc194d160701e 312 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 18 310 1.7E-115 T 22-04-2016 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SII_RS08665 276c8c57559a4198046bc194d160701e 312 SUPERFAMILY SSF55257 4 48 2.75E-29 T 22-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SII_RS08665 276c8c57559a4198046bc194d160701e 312 SUPERFAMILY SSF55257 170 224 2.75E-29 T 22-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SII_RS08665 276c8c57559a4198046bc194d160701e 312 SUPERFAMILY SSF56553 48 169 7.06E-42 T 22-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SII_RS04260 7dc2595be783258ba8a9ddfe208b4c7e 649 SUPERFAMILY SSF54211 227 397 2.28E-53 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SII_RS04260 7dc2595be783258ba8a9ddfe208b4c7e 649 Pfam PF00204 DNA gyrase B 227 397 1.2E-56 T 22-04-2016 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 SII_RS04260 7dc2595be783258ba8a9ddfe208b4c7e 649 SMART SM00387 36 182 4.4E-27 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SII_RS04260 7dc2595be783258ba8a9ddfe208b4c7e 649 TIGRFAM TIGR01058 parE_Gpos: DNA topoisomerase IV, B subunit 9 644 0.0 T 22-04-2016 IPR005740 DNA topoisomerase 4 subunit B, Firmicutes/Mollicutes GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 SII_RS04260 7dc2595be783258ba8a9ddfe208b4c7e 649 PRINTS PR00418 DNA topoisomerase II family signature 40 55 7.9E-71 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SII_RS04260 7dc2595be783258ba8a9ddfe208b4c7e 649 PRINTS PR00418 DNA topoisomerase II family signature 513 530 7.9E-71 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SII_RS04260 7dc2595be783258ba8a9ddfe208b4c7e 649 PRINTS PR00418 DNA topoisomerase II family signature 577 593 7.9E-71 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SII_RS04260 7dc2595be783258ba8a9ddfe208b4c7e 649 PRINTS PR00418 DNA topoisomerase II family signature 117 131 7.9E-71 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SII_RS04260 7dc2595be783258ba8a9ddfe208b4c7e 649 PRINTS PR00418 DNA topoisomerase II family signature 495 511 7.9E-71 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SII_RS04260 7dc2595be783258ba8a9ddfe208b4c7e 649 PRINTS PR00418 DNA topoisomerase II family signature 533 545 7.9E-71 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SII_RS04260 7dc2595be783258ba8a9ddfe208b4c7e 649 PRINTS PR00418 DNA topoisomerase II family signature 273 286 7.9E-71 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SII_RS04260 7dc2595be783258ba8a9ddfe208b4c7e 649 PRINTS PR00418 DNA topoisomerase II family signature 429 443 7.9E-71 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SII_RS04260 7dc2595be783258ba8a9ddfe208b4c7e 649 PRINTS PR00418 DNA topoisomerase II family signature 75 88 7.9E-71 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SII_RS04260 7dc2595be783258ba8a9ddfe208b4c7e 649 ProSitePatterns PS00177 DNA topoisomerase II signature. 431 439 - T 22-04-2016 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 SII_RS04260 7dc2595be783258ba8a9ddfe208b4c7e 649 SMART SM00433 40 638 0.0 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SII_RS04260 7dc2595be783258ba8a9ddfe208b4c7e 649 Pfam PF01751 Toprim domain 428 538 1.4E-17 T 22-04-2016 IPR006171 Toprim domain SII_RS04260 7dc2595be783258ba8a9ddfe208b4c7e 649 SUPERFAMILY SSF55874 10 224 3.67E-70 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SII_RS04260 7dc2595be783258ba8a9ddfe208b4c7e 649 SUPERFAMILY SSF56719 403 641 3.66E-86 T 22-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 SII_RS04260 7dc2595be783258ba8a9ddfe208b4c7e 649 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 37 181 1.7E-23 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SII_RS04260 7dc2595be783258ba8a9ddfe208b4c7e 649 Hamap MF_00939 DNA topoisomerase 4 subunit B [parE]. 9 643 50.741 T 22-04-2016 IPR005740 DNA topoisomerase 4 subunit B, Firmicutes/Mollicutes GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 SII_RS04260 7dc2595be783258ba8a9ddfe208b4c7e 649 PANTHER PTHR10169 9 637 0.0 T 22-04-2016 SII_RS04260 7dc2595be783258ba8a9ddfe208b4c7e 649 PANTHER PTHR10169:SF44 9 637 0.0 T 22-04-2016 SII_RS04260 7dc2595be783258ba8a9ddfe208b4c7e 649 PRINTS PR01159 DNA gyrase subunit B signature 381 401 8.6E-53 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SII_RS04260 7dc2595be783258ba8a9ddfe208b4c7e 649 PRINTS PR01159 DNA gyrase subunit B signature 202 215 8.6E-53 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SII_RS04260 7dc2595be783258ba8a9ddfe208b4c7e 649 PRINTS PR01159 DNA gyrase subunit B signature 11 21 8.6E-53 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SII_RS04260 7dc2595be783258ba8a9ddfe208b4c7e 649 PRINTS PR01159 DNA gyrase subunit B signature 367 381 8.6E-53 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SII_RS04260 7dc2595be783258ba8a9ddfe208b4c7e 649 PRINTS PR01159 DNA gyrase subunit B signature 598 610 8.6E-53 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SII_RS04260 7dc2595be783258ba8a9ddfe208b4c7e 649 PRINTS PR01159 DNA gyrase subunit B signature 247 265 8.6E-53 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SII_RS04260 7dc2595be783258ba8a9ddfe208b4c7e 649 PRINTS PR01159 DNA gyrase subunit B signature 479 488 8.6E-53 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SII_RS04260 7dc2595be783258ba8a9ddfe208b4c7e 649 PRINTS PR01159 DNA gyrase subunit B signature 614 630 8.6E-53 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SII_RS04260 7dc2595be783258ba8a9ddfe208b4c7e 649 PRINTS PR01159 DNA gyrase subunit B signature 317 333 8.6E-53 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SII_RS04260 7dc2595be783258ba8a9ddfe208b4c7e 649 PRINTS PR01159 DNA gyrase subunit B signature 187 202 8.6E-53 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SII_RS04260 7dc2595be783258ba8a9ddfe208b4c7e 649 Gene3D G3DSA:3.30.230.10 226 397 1.1E-63 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SII_RS04260 7dc2595be783258ba8a9ddfe208b4c7e 649 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 574 634 3.6E-28 T 22-04-2016 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 SII_RS04260 7dc2595be783258ba8a9ddfe208b4c7e 649 Gene3D G3DSA:3.30.565.10 11 224 1.0E-88 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SII_RS04260 7dc2595be783258ba8a9ddfe208b4c7e 649 Gene3D G3DSA:3.40.50.670 414 626 8.6E-86 T 22-04-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 SII_RS07180 8be8d58828d438613d30387cf5884c2a 267 PANTHER PTHR32502 1 267 2.3E-159 T 22-04-2016 SII_RS07180 8be8d58828d438613d30387cf5884c2a 267 Pfam PF03609 PTS system sorbose-specific iic component 3 238 5.4E-68 T 22-04-2016 IPR004700 Phosphotransferase system, sorbose-specific IIC subunit GO:0009401|GO:0016021 SII_RS07180 8be8d58828d438613d30387cf5884c2a 267 PANTHER PTHR32502:SF10 1 267 2.3E-159 T 22-04-2016 SII_RS00375 583f80194e15c6630aeea1473e836b5b 348 ProSitePatterns PS00545 Aldose 1-epimerase putative active site. 173 182 - T 22-04-2016 IPR018052 Aldose 1-epimerase, conserved site KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317|UniPathway: UPA00242 SII_RS00375 583f80194e15c6630aeea1473e836b5b 348 Pfam PF01263 Aldose 1-epimerase 20 341 2.3E-72 T 22-04-2016 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 SII_RS00375 583f80194e15c6630aeea1473e836b5b 348 SUPERFAMILY SSF74650 8 341 3.77E-90 T 22-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 SII_RS00375 583f80194e15c6630aeea1473e836b5b 348 PANTHER PTHR10091 11 345 5.7E-113 T 22-04-2016 SII_RS00375 583f80194e15c6630aeea1473e836b5b 348 PIRSF PIRSF005096 1 345 3.2E-93 T 22-04-2016 IPR015443 Aldose 1-epimerase GO:0016853|GO:0019318 KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317|UniPathway: UPA00242 SII_RS00375 583f80194e15c6630aeea1473e836b5b 348 Gene3D G3DSA:2.70.98.10 9 347 2.2E-96 T 22-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 SII_RS00375 583f80194e15c6630aeea1473e836b5b 348 PANTHER PTHR10091:SF0 11 345 5.7E-113 T 22-04-2016 SII_RS07815 1a16708bc0004ada3b19a81ab168cdc3 308 PANTHER PTHR24220:SF523 5 222 3.6E-75 T 22-04-2016 SII_RS07815 1a16708bc0004ada3b19a81ab168cdc3 308 Pfam PF00005 ABC transporter 20 162 4.1E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SII_RS07815 1a16708bc0004ada3b19a81ab168cdc3 308 SUPERFAMILY SSF52540 3 222 2.33E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS07815 1a16708bc0004ada3b19a81ab168cdc3 308 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SII_RS07815 1a16708bc0004ada3b19a81ab168cdc3 308 PANTHER PTHR24220 5 222 3.6E-75 T 22-04-2016 SII_RS07815 1a16708bc0004ada3b19a81ab168cdc3 308 SMART SM00382 28 210 1.3E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain SII_RS07815 1a16708bc0004ada3b19a81ab168cdc3 308 Gene3D G3DSA:3.40.50.300 3 222 2.0E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS04215 56f3d0b621212bb1c4d3abab1f8840af 134 Gene3D G3DSA:3.90.79.10 3 129 2.7E-22 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SII_RS04215 56f3d0b621212bb1c4d3abab1f8840af 134 ProSitePatterns PS00893 Nudix box signature. 42 63 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 SII_RS04215 56f3d0b621212bb1c4d3abab1f8840af 134 PANTHER PTHR22769 1 134 1.0E-13 T 22-04-2016 SII_RS04215 56f3d0b621212bb1c4d3abab1f8840af 134 Pfam PF00293 NUDIX domain 10 115 3.3E-14 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 SII_RS04215 56f3d0b621212bb1c4d3abab1f8840af 134 SUPERFAMILY SSF55811 3 132 1.19E-20 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SII_RS02675 47e5918e3130d4f78d5aee5fb58ec608 337 SUPERFAMILY SSF53474 21 160 1.13E-32 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SII_RS02675 47e5918e3130d4f78d5aee5fb58ec608 337 SUPERFAMILY SSF53474 237 330 1.13E-32 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SII_RS02675 47e5918e3130d4f78d5aee5fb58ec608 337 Pfam PF12697 Alpha/beta hydrolase family 47 299 3.5E-11 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 SII_RS02675 47e5918e3130d4f78d5aee5fb58ec608 337 Gene3D G3DSA:3.40.50.1820 22 330 3.3E-35 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SII_RS02675 47e5918e3130d4f78d5aee5fb58ec608 337 PANTHER PTHR10992 5 156 1.8E-22 T 22-04-2016 SII_RS02675 47e5918e3130d4f78d5aee5fb58ec608 337 PANTHER PTHR10992 186 330 1.8E-22 T 22-04-2016 SII_RS02720 c8842f0f15ddc14fd9114697980227f7 288 Pfam PF12849 PBP superfamily domain 32 257 1.2E-34 T 22-04-2016 IPR024370 PBP domain SII_RS02720 c8842f0f15ddc14fd9114697980227f7 288 PANTHER PTHR30570 19 286 1.2E-131 T 22-04-2016 SII_RS02720 c8842f0f15ddc14fd9114697980227f7 288 SUPERFAMILY SSF53850 33 281 2.17E-71 T 22-04-2016 SII_RS02720 c8842f0f15ddc14fd9114697980227f7 288 Gene3D G3DSA:3.40.190.10 119 231 1.9E-40 T 22-04-2016 SII_RS02720 c8842f0f15ddc14fd9114697980227f7 288 TIGRFAM TIGR02136 ptsS_2: phosphate binding protein 9 272 3.2E-82 T 22-04-2016 IPR011862 Phosphate binding protein GO:0006810 SII_RS02720 c8842f0f15ddc14fd9114697980227f7 288 PANTHER PTHR30570:SF4 19 286 1.2E-131 T 22-04-2016 SII_RS02720 c8842f0f15ddc14fd9114697980227f7 288 Gene3D G3DSA:3.40.190.10 42 118 1.3E-5 T 22-04-2016 SII_RS02720 c8842f0f15ddc14fd9114697980227f7 288 Gene3D G3DSA:3.40.190.10 232 274 1.3E-5 T 22-04-2016 SII_RS08550 36d7c414015e7f62eaf8974d687d85aa 299 PANTHER PTHR22572 6 293 3.2E-110 T 22-04-2016 SII_RS08550 36d7c414015e7f62eaf8974d687d85aa 299 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 4 268 8.5E-109 T 22-04-2016 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343 SII_RS08550 36d7c414015e7f62eaf8974d687d85aa 299 PANTHER PTHR22572:SF14 6 293 3.2E-110 T 22-04-2016 SII_RS08550 36d7c414015e7f62eaf8974d687d85aa 299 SUPERFAMILY SSF53448 2 272 8.11E-65 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SII_RS08550 36d7c414015e7f62eaf8974d687d85aa 299 Gene3D G3DSA:3.90.550.10 5 278 3.6E-70 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SII_RS08550 36d7c414015e7f62eaf8974d687d85aa 299 Pfam PF00483 Nucleotidyl transferase 6 264 2.1E-31 T 22-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 SII_RS05040 6149b2e945fc7e5390d66d6eb7abcc57 293 Gene3D G3DSA:3.30.460.10 19 151 3.1E-7 T 22-04-2016 SII_RS05040 6149b2e945fc7e5390d66d6eb7abcc57 293 Pfam PF01909 Nucleotidyltransferase domain 41 94 1.9E-5 T 22-04-2016 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 SII_RS05040 6149b2e945fc7e5390d66d6eb7abcc57 293 SUPERFAMILY SSF81301 22 152 3.63E-11 T 22-04-2016 SII_RS02650 03f5c6eadb7a451acd30c20eb37c22bf 133 ProSitePatterns PS00893 Nudix box signature. 36 57 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 SII_RS02650 03f5c6eadb7a451acd30c20eb37c22bf 133 Pfam PF00293 NUDIX domain 8 114 2.2E-12 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 SII_RS02650 03f5c6eadb7a451acd30c20eb37c22bf 133 SUPERFAMILY SSF55811 15 130 7.31E-19 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SII_RS02650 03f5c6eadb7a451acd30c20eb37c22bf 133 Gene3D G3DSA:3.90.79.10 3 128 3.5E-20 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SII_RS06390 0ed8a0ca7ad384ca5dd15cc1fc98e820 265 PANTHER PTHR30352:SF9 5 251 7.9E-119 T 22-04-2016 SII_RS06390 0ed8a0ca7ad384ca5dd15cc1fc98e820 265 Pfam PF04055 Radical SAM superfamily 32 194 1.5E-30 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 SII_RS06390 0ed8a0ca7ad384ca5dd15cc1fc98e820 265 Pfam PF13353 4Fe-4S single cluster domain 24 152 4.6E-16 T 22-04-2016 SII_RS06390 0ed8a0ca7ad384ca5dd15cc1fc98e820 265 Gene3D G3DSA:3.80.30.10 79 256 2.0E-64 T 22-04-2016 SII_RS06390 0ed8a0ca7ad384ca5dd15cc1fc98e820 265 SUPERFAMILY SSF102114 31 233 1.44E-25 T 22-04-2016 SII_RS06390 0ed8a0ca7ad384ca5dd15cc1fc98e820 265 PANTHER PTHR30352 5 251 7.9E-119 T 22-04-2016 SII_RS06390 0ed8a0ca7ad384ca5dd15cc1fc98e820 265 TIGRFAM TIGR02493 PFLA: pyruvate formate-lyase 1-activating enzyme 15 252 5.7E-94 T 22-04-2016 IPR012838 Pyruvate formate-lyase activating enzyme GO:0043365|GO:0055114 SII_RS06390 0ed8a0ca7ad384ca5dd15cc1fc98e820 265 ProSitePatterns PS01087 Radical activating enzymes signature. 26 47 - T 22-04-2016 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 SII_RS00795 66e7b7f466c0f9b2ce5fc7d2d93a908f 44 PANTHER PTHR14503 2 44 3.6E-18 T 22-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SII_RS00795 66e7b7f466c0f9b2ce5fc7d2d93a908f 44 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 1 42 1.0E-14 T 22-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SII_RS00795 66e7b7f466c0f9b2ce5fc7d2d93a908f 44 Pfam PF00468 Ribosomal protein L34 2 44 3.8E-22 T 22-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SII_RS00795 66e7b7f466c0f9b2ce5fc7d2d93a908f 44 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 1 44 15.739 T 22-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SII_RS00795 66e7b7f466c0f9b2ce5fc7d2d93a908f 44 ProSitePatterns PS00784 Ribosomal protein L34 signature. 2 21 - T 22-04-2016 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SII_RS00795 66e7b7f466c0f9b2ce5fc7d2d93a908f 44 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 2 44 1.5E-20 T 22-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SII_RS00015 92b98d95a4f3fc8d76b25e03ace81bb6 65 PIRSF PIRSF037263 1 65 1.3E-32 T 22-04-2016 IPR009296 Protein of unknown function DUF951 SII_RS00015 92b98d95a4f3fc8d76b25e03ace81bb6 65 PANTHER PTHR38455 1 63 7.9E-29 T 22-04-2016 SII_RS00015 92b98d95a4f3fc8d76b25e03ace81bb6 65 PANTHER PTHR38455:SF1 1 63 7.9E-29 T 22-04-2016 SII_RS00015 92b98d95a4f3fc8d76b25e03ace81bb6 65 Pfam PF06107 Bacterial protein of unknown function (DUF951) 2 63 1.4E-27 T 22-04-2016 IPR009296 Protein of unknown function DUF951 SII_RS09245 bf057d455daf0907d0afb4f3933db91c 414 SMART SM00245 203 395 0.0067 T 22-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 SII_RS09245 bf057d455daf0907d0afb4f3933db91c 414 SUPERFAMILY SSF52096 139 258 5.96E-28 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SII_RS09245 bf057d455daf0907d0afb4f3933db91c 414 SUPERFAMILY SSF52096 305 402 5.96E-28 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SII_RS09245 bf057d455daf0907d0afb4f3933db91c 414 Pfam PF03572 Peptidase family S41 175 392 9.2E-15 T 22-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 SII_RS09245 bf057d455daf0907d0afb4f3933db91c 414 Gene3D G3DSA:3.90.226.10 282 413 1.7E-30 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SII_RS09245 bf057d455daf0907d0afb4f3933db91c 414 Gene3D G3DSA:3.90.226.10 141 234 1.7E-30 T 22-04-2016 IPR029045 ClpP/crotonase-like domain SII_RS04065 61f78948ea39c59be7823c520392d1de 60 Gene3D G3DSA:3.30.429.20 1 57 1.8E-22 T 22-04-2016 SII_RS04065 61f78948ea39c59be7823c520392d1de 60 SUPERFAMILY SSF55331 2 58 2.62E-18 T 22-04-2016 IPR014347 Tautomerase/MIF superfamily SII_RS04065 61f78948ea39c59be7823c520392d1de 60 PANTHER PTHR35530 1 59 2.8E-19 T 22-04-2016 SII_RS04065 61f78948ea39c59be7823c520392d1de 60 Pfam PF01361 Tautomerase enzyme 2 57 2.2E-24 T 22-04-2016 IPR004370 4-oxalocrotonate tautomerase GO:0006725|GO:0016853 SII_RS08525 eb34050a98535a0853e9ec2e9f781c24 156 Pfam PF00857 Isochorismatase family 5 136 1.8E-16 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 SII_RS08525 eb34050a98535a0853e9ec2e9f781c24 156 Gene3D G3DSA:3.40.50.850 4 148 1.0E-18 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 SII_RS08525 eb34050a98535a0853e9ec2e9f781c24 156 SUPERFAMILY SSF52499 4 150 4.45E-22 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 SII_RS04170 bde7958000e3587a13fe51805f80f4bf 109 PANTHER PTHR13696 1 106 2.2E-22 T 22-04-2016 SII_RS04170 bde7958000e3587a13fe51805f80f4bf 109 PANTHER PTHR13696:SF62 1 106 2.2E-22 T 22-04-2016 SII_RS04170 bde7958000e3587a13fe51805f80f4bf 109 SUPERFAMILY SSF117916 11 107 2.49E-30 T 22-04-2016 SII_RS04170 bde7958000e3587a13fe51805f80f4bf 109 Pfam PF01883 Domain of unknown function DUF59 12 85 1.4E-22 T 22-04-2016 IPR002744 Domain of unknown function DUF59 SII_RS05770 e1a35bf0b8f0374da1e402a4072abfe0 161 PANTHER PTHR31087:SF9 1 158 1.9E-58 T 22-04-2016 SII_RS05770 e1a35bf0b8f0374da1e402a4072abfe0 161 Pfam PF04525 LURP-one-related 6 148 1.2E-11 T 22-04-2016 IPR007612 LURP1-related protein domain SII_RS05770 e1a35bf0b8f0374da1e402a4072abfe0 161 PANTHER PTHR31087 1 158 1.9E-58 T 22-04-2016 SII_RS05770 e1a35bf0b8f0374da1e402a4072abfe0 161 SUPERFAMILY SSF54518 2 153 3.92E-34 T 22-04-2016 IPR025659 Tubby C-terminal-like domain SII_RS00340 2c2cf87d808eff6c387bb53993a6d6dd 601 PIRSF PIRSF006336 3 594 8.2E-180 T 22-04-2016 IPR026283 Beta-galactosidase 1-like GO:0004565 SII_RS00340 2c2cf87d808eff6c387bb53993a6d6dd 601 SUPERFAMILY SSF51445 15 338 6.93E-101 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily SII_RS00340 2c2cf87d808eff6c387bb53993a6d6dd 601 Pfam PF01301 Glycosyl hydrolases family 35 16 334 7.6E-118 T 22-04-2016 IPR031330 Glycoside hydrolase 35, catalytic domain KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 SII_RS00340 2c2cf87d808eff6c387bb53993a6d6dd 601 Gene3D G3DSA:3.20.20.80 13 338 2.9E-121 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 SII_RS00340 2c2cf87d808eff6c387bb53993a6d6dd 601 PANTHER PTHR23421:SF13 13 596 1.3E-234 T 22-04-2016 SII_RS00340 2c2cf87d808eff6c387bb53993a6d6dd 601 SUPERFAMILY SSF49785 452 583 1.22E-22 T 22-04-2016 IPR008979 Galactose-binding domain-like SII_RS00340 2c2cf87d808eff6c387bb53993a6d6dd 601 PANTHER PTHR23421 13 596 1.3E-234 T 22-04-2016 IPR001944 Glycoside hydrolase, family 35 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 SII_RS00340 2c2cf87d808eff6c387bb53993a6d6dd 601 PRINTS PR00742 Glycosyl hydrolase family 35 signature 95 114 4.4E-47 T 22-04-2016 IPR001944 Glycoside hydrolase, family 35 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 SII_RS00340 2c2cf87d808eff6c387bb53993a6d6dd 601 PRINTS PR00742 Glycosyl hydrolase family 35 signature 19 36 4.4E-47 T 22-04-2016 IPR001944 Glycoside hydrolase, family 35 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 SII_RS00340 2c2cf87d808eff6c387bb53993a6d6dd 601 PRINTS PR00742 Glycosyl hydrolase family 35 signature 149 164 4.4E-47 T 22-04-2016 IPR001944 Glycoside hydrolase, family 35 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 SII_RS00340 2c2cf87d808eff6c387bb53993a6d6dd 601 PRINTS PR00742 Glycosyl hydrolase family 35 signature 40 58 4.4E-47 T 22-04-2016 IPR001944 Glycoside hydrolase, family 35 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 SII_RS00340 2c2cf87d808eff6c387bb53993a6d6dd 601 PRINTS PR00742 Glycosyl hydrolase family 35 signature 303 319 4.4E-47 T 22-04-2016 IPR001944 Glycoside hydrolase, family 35 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 SII_RS00340 2c2cf87d808eff6c387bb53993a6d6dd 601 PRINTS PR00742 Glycosyl hydrolase family 35 signature 536 552 4.4E-47 T 22-04-2016 IPR001944 Glycoside hydrolase, family 35 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 SII_RS00340 2c2cf87d808eff6c387bb53993a6d6dd 601 PRINTS PR00742 Glycosyl hydrolase family 35 signature 241 256 4.4E-47 T 22-04-2016 IPR001944 Glycoside hydrolase, family 35 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 SII_RS00340 2c2cf87d808eff6c387bb53993a6d6dd 601 PRINTS PR00742 Glycosyl hydrolase family 35 signature 276 291 4.4E-47 T 22-04-2016 IPR001944 Glycoside hydrolase, family 35 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 SII_RS00340 2c2cf87d808eff6c387bb53993a6d6dd 601 Gene3D G3DSA:2.60.120.260 455 579 4.8E-18 T 22-04-2016 IPR008979 Galactose-binding domain-like SII_RS03085 1d77d8c7f400baa6b1390f048c42a31a 300 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 300 94.443 T 22-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SII_RS03085 1d77d8c7f400baa6b1390f048c42a31a 300 SUPERFAMILY SSF56176 7 193 2.7E-49 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 SII_RS03085 1d77d8c7f400baa6b1390f048c42a31a 300 Gene3D G3DSA:3.90.78.10 226 299 9.0E-32 T 22-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SII_RS03085 1d77d8c7f400baa6b1390f048c42a31a 300 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 22 298 3.2E-70 T 22-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SII_RS03085 1d77d8c7f400baa6b1390f048c42a31a 300 PANTHER PTHR21071:SF4 1 299 1.4E-128 T 22-04-2016 SII_RS03085 1d77d8c7f400baa6b1390f048c42a31a 300 PANTHER PTHR21071 1 299 1.4E-128 T 22-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SII_RS03085 1d77d8c7f400baa6b1390f048c42a31a 300 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 199 297 4.6E-28 T 22-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SII_RS03085 1d77d8c7f400baa6b1390f048c42a31a 300 SUPERFAMILY SSF56194 197 299 1.31E-36 T 22-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SII_RS03085 1d77d8c7f400baa6b1390f048c42a31a 300 Gene3D G3DSA:3.30.465.10 87 225 7.5E-49 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 SII_RS03085 1d77d8c7f400baa6b1390f048c42a31a 300 Pfam PF01565 FAD binding domain 35 164 3.7E-28 T 22-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 SII_RS03085 1d77d8c7f400baa6b1390f048c42a31a 300 Gene3D G3DSA:3.30.43.10 3 86 3.8E-31 T 22-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 SII_RS06140 575e1b94f0f2255f46b647496967d91d 462 PANTHER PTHR11785:SF342 11 460 2.9E-136 T 22-04-2016 SII_RS06140 575e1b94f0f2255f46b647496967d91d 462 Pfam PF13520 Amino acid permease 21 428 2.4E-53 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 SII_RS06140 575e1b94f0f2255f46b647496967d91d 462 PIRSF PIRSF006060 5 462 3.6E-79 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 SII_RS06140 575e1b94f0f2255f46b647496967d91d 462 PANTHER PTHR11785 11 460 2.9E-136 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 SII_RS02280 3dff43fa40d75773dfd3766009ca4064 252 SUPERFAMILY SSF52540 4 237 2.66E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS02280 3dff43fa40d75773dfd3766009ca4064 252 ProSitePatterns PS00211 ABC transporters family signature. 152 166 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SII_RS02280 3dff43fa40d75773dfd3766009ca4064 252 Gene3D G3DSA:3.40.50.300 3 238 7.3E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS02280 3dff43fa40d75773dfd3766009ca4064 252 PANTHER PTHR24220:SF534 6 252 1.9E-95 T 22-04-2016 SII_RS02280 3dff43fa40d75773dfd3766009ca4064 252 SMART SM00382 34 238 1.1E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain SII_RS02280 3dff43fa40d75773dfd3766009ca4064 252 Pfam PF00005 ABC transporter 25 180 5.9E-27 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SII_RS02280 3dff43fa40d75773dfd3766009ca4064 252 PANTHER PTHR24220 6 252 1.9E-95 T 22-04-2016 SII_RS05945 6f8f965d83f9ca452d97dd99d233d3a3 438 SUPERFAMILY SSF55874 303 415 1.58E-10 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SII_RS05945 6f8f965d83f9ca452d97dd99d233d3a3 438 PANTHER PTHR40448 1 438 1.2E-65 T 22-04-2016 SII_RS05945 6f8f965d83f9ca452d97dd99d233d3a3 438 Gene3D G3DSA:3.30.565.10 303 415 2.0E-8 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SII_RS05945 6f8f965d83f9ca452d97dd99d233d3a3 438 Pfam PF14501 GHKL domain 336 434 5.7E-11 T 22-04-2016 IPR032834 Sensor histidine kinase NatK, C-terminal domain SII_RS05945 6f8f965d83f9ca452d97dd99d233d3a3 438 PANTHER PTHR40448:SF1 1 438 1.2E-65 T 22-04-2016 SII_RS06255 e01c014d86f1c3b215cf8b94d68cedd9 128 SUPERFAMILY SSF54593 6 127 4.3E-20 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SII_RS06255 e01c014d86f1c3b215cf8b94d68cedd9 128 Gene3D G3DSA:3.10.180.10 1 128 1.7E-43 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SII_RS06255 e01c014d86f1c3b215cf8b94d68cedd9 128 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 11 124 8.6E-6 T 22-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain SII_RS06115 03761d49bc1539a962a55385d585ac4f 78 Pfam PF11195 Protein of unknown function (DUF2829) 2 76 9.3E-22 T 22-04-2016 IPR021361 Protein of unknown function DUF2829 SII_RS05110 3f0056322be78c54c4c36b5059eb1be4 472 ProSitePatterns PS00042 Crp-type HTH domain signature. 431 454 - T 22-04-2016 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 SII_RS05110 3f0056322be78c54c4c36b5059eb1be4 472 PANTHER PTHR30595:SF6 6 461 9.5E-17 T 22-04-2016 SII_RS05110 3f0056322be78c54c4c36b5059eb1be4 472 Gene3D G3DSA:1.10.10.10 414 470 1.2E-4 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SII_RS05110 3f0056322be78c54c4c36b5059eb1be4 472 PANTHER PTHR30595 6 461 9.5E-17 T 22-04-2016 SII_RS05110 3f0056322be78c54c4c36b5059eb1be4 472 Pfam PF04326 Putative DNA-binding domain 14 111 5.4E-15 T 22-04-2016 IPR007421 Schlafen, AAA domain GO:0005524 SII_RS05715 4e0ab23be784f6d9e54561f9b8a86ecf 308 Pfam PF02687 FtsX-like permease family 188 308 3.0E-14 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 SII_RS05715 4e0ab23be784f6d9e54561f9b8a86ecf 308 PIRSF PIRSF003097 1 308 1.9E-73 T 22-04-2016 IPR004513 Cell division protein FtsX GO:0007049|GO:0016021 SII_RS05715 4e0ab23be784f6d9e54561f9b8a86ecf 308 PANTHER PTHR30489 11 308 2.6E-33 T 22-04-2016 SII_RS04910 6a19f3080368f5957f889f0eb0b6ec1e 415 Gene3D G3DSA:3.40.50.2000 196 340 3.0E-17 T 22-04-2016 SII_RS04910 6a19f3080368f5957f889f0eb0b6ec1e 415 PANTHER PTHR12526 200 374 1.6E-24 T 22-04-2016 SII_RS04910 6a19f3080368f5957f889f0eb0b6ec1e 415 Pfam PF00534 Glycosyl transferases group 1 195 339 1.7E-27 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 SII_RS04910 6a19f3080368f5957f889f0eb0b6ec1e 415 SUPERFAMILY SSF53756 1 374 2.2E-46 T 22-04-2016 SII_RS07850 3fd837a37b392a8e4fa0da83077d8578 687 PANTHER PTHR24093:SF50 120 655 3.7E-88 T 22-04-2016 SII_RS07850 3fd837a37b392a8e4fa0da83077d8578 687 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 384 390 - T 22-04-2016 IPR018303 P-type ATPase, phosphorylation site SII_RS07850 3fd837a37b392a8e4fa0da83077d8578 687 Gene3D G3DSA:3.40.1110.10 397 491 5.1E-9 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 SII_RS07850 3fd837a37b392a8e4fa0da83077d8578 687 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 140 683 1.3E-156 T 22-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 SII_RS07850 3fd837a37b392a8e4fa0da83077d8578 687 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 161 669 1.5E-75 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 SII_RS07850 3fd837a37b392a8e4fa0da83077d8578 687 Pfam PF00122 E1-E2 ATPase 163 373 6.9E-38 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 SII_RS07850 3fd837a37b392a8e4fa0da83077d8578 687 PANTHER PTHR24093 120 655 3.7E-88 T 22-04-2016 SII_RS07850 3fd837a37b392a8e4fa0da83077d8578 687 Pfam PF00702 haloacid dehalogenase-like hydrolase 378 596 7.0E-30 T 22-04-2016 SII_RS07850 3fd837a37b392a8e4fa0da83077d8578 687 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 240 254 2.3E-22 T 22-04-2016 SII_RS07850 3fd837a37b392a8e4fa0da83077d8578 687 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 529 539 2.3E-22 T 22-04-2016 SII_RS07850 3fd837a37b392a8e4fa0da83077d8578 687 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 582 601 2.3E-22 T 22-04-2016 SII_RS07850 3fd837a37b392a8e4fa0da83077d8578 687 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 382 396 2.3E-22 T 22-04-2016 SII_RS07850 3fd837a37b392a8e4fa0da83077d8578 687 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 605 617 2.3E-22 T 22-04-2016 SII_RS07850 3fd837a37b392a8e4fa0da83077d8578 687 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 507 518 2.3E-22 T 22-04-2016 SII_RS07850 3fd837a37b392a8e4fa0da83077d8578 687 Gene3D G3DSA:2.70.150.10 192 290 5.1E-20 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 SII_RS07850 3fd837a37b392a8e4fa0da83077d8578 687 SUPERFAMILY SSF81653 197 290 2.75E-19 T 22-04-2016 SII_RS07850 3fd837a37b392a8e4fa0da83077d8578 687 SUPERFAMILY SSF56784 440 681 2.77E-36 T 22-04-2016 IPR023214 HAD-like domain SII_RS07850 3fd837a37b392a8e4fa0da83077d8578 687 SUPERFAMILY SSF56784 381 400 2.77E-36 T 22-04-2016 IPR023214 HAD-like domain SII_RS07850 3fd837a37b392a8e4fa0da83077d8578 687 Gene3D G3DSA:3.40.50.1000 502 624 7.0E-32 T 22-04-2016 IPR023214 HAD-like domain SII_RS07850 3fd837a37b392a8e4fa0da83077d8578 687 Gene3D G3DSA:3.40.50.1000 358 396 7.0E-32 T 22-04-2016 IPR023214 HAD-like domain SII_RS08840 cf0312b5a22ad53fb7b3ace709652297 564 PANTHER PTHR30009:SF11 8 561 5.4E-137 T 22-04-2016 SII_RS08840 cf0312b5a22ad53fb7b3ace709652297 564 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 499 516 - T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 SII_RS08840 cf0312b5a22ad53fb7b3ace709652297 564 Pfam PF00367 phosphotransferase system, EIIB 490 521 8.6E-13 T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 SII_RS08840 cf0312b5a22ad53fb7b3ace709652297 564 Gene3D G3DSA:3.30.1360.60 482 561 1.9E-21 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 SII_RS08840 cf0312b5a22ad53fb7b3ace709652297 564 Pfam PF02378 Phosphotransferase system, EIIC 16 363 3.1E-72 T 22-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 SII_RS08840 cf0312b5a22ad53fb7b3ace709652297 564 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 424 546 4.3E-15 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 SII_RS08840 cf0312b5a22ad53fb7b3ace709652297 564 PANTHER PTHR30009 8 561 5.4E-137 T 22-04-2016 SII_RS08840 cf0312b5a22ad53fb7b3ace709652297 564 SUPERFAMILY SSF55604 487 561 1.83E-15 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 SII_RS08425 861db7586e670cb23977f9e8299f5509 333 PANTHER PTHR30012 3 333 5.2E-56 T 22-04-2016 SII_RS08425 861db7586e670cb23977f9e8299f5509 333 PRINTS PR00812 Bacterial general secretion pathway protein F signature 313 332 4.9E-7 T 22-04-2016 IPR003004 GspF/PilC family SII_RS08425 861db7586e670cb23977f9e8299f5509 333 PRINTS PR00812 Bacterial general secretion pathway protein F signature 108 136 4.9E-7 T 22-04-2016 IPR003004 GspF/PilC family SII_RS08425 861db7586e670cb23977f9e8299f5509 333 PRINTS PR00812 Bacterial general secretion pathway protein F signature 297 311 4.9E-7 T 22-04-2016 IPR003004 GspF/PilC family SII_RS08425 861db7586e670cb23977f9e8299f5509 333 Pfam PF00482 Type II secretion system (T2SS), protein F 19 136 4.5E-12 T 22-04-2016 IPR018076 Type II secretion system F domain SII_RS08425 861db7586e670cb23977f9e8299f5509 333 Pfam PF00482 Type II secretion system (T2SS), protein F 204 324 2.0E-15 T 22-04-2016 IPR018076 Type II secretion system F domain SII_RS08425 861db7586e670cb23977f9e8299f5509 333 PANTHER PTHR30012:SF0 3 333 5.2E-56 T 22-04-2016 SII_RS06485 58e4eb4c19fd8a0f4f26d181b90553ad 94 Pfam PF11364 Protein of unknown function (DUF3165) 1 81 1.1E-33 T 22-04-2016 IPR021506 Protein of unknown function DUF3165 SII_RS07370 8189cef8c685aba0f114e29449102c10 103 TIGRFAM TIGR00253 RNA_bind_YhbY: putative RNA-binding protein, YhbY family 3 98 8.1E-26 T 22-04-2016 IPR017924 RNA-binding protein YhbY GO:0003723 SII_RS07370 8189cef8c685aba0f114e29449102c10 103 SMART SM01103 3 86 6.1E-34 T 22-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 SII_RS07370 8189cef8c685aba0f114e29449102c10 103 Gene3D G3DSA:3.30.110.60 1 97 1.7E-30 T 22-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 SII_RS07370 8189cef8c685aba0f114e29449102c10 103 ProDom PD010559 RNA-BINDING YHBY UPF0044 PREDICTED RNA RIBOSOMAL CONTAINING KH BINDING DOMAIN 10 97 1.0E-43 T 22-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 SII_RS07370 8189cef8c685aba0f114e29449102c10 103 SUPERFAMILY SSF75471 1 96 5.23E-27 T 22-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 SII_RS07370 8189cef8c685aba0f114e29449102c10 103 Pfam PF01985 CRS1 / YhbY (CRM) domain 3 86 1.5E-20 T 22-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 SII_RS07370 8189cef8c685aba0f114e29449102c10 103 PANTHER PTHR31846 1 91 2.6E-31 T 22-04-2016 SII_RS07845 98d663a37bea1785f6f4d97876678158 111 PANTHER PTHR33498 1 101 1.5E-36 T 22-04-2016 SII_RS07845 98d663a37bea1785f6f4d97876678158 111 Pfam PF01610 Transposase 4 104 2.4E-19 T 22-04-2016 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain SII_RS07845 98d663a37bea1785f6f4d97876678158 111 PANTHER PTHR33498:SF1 1 101 1.5E-36 T 22-04-2016 SII_RS07335 edfc1c7d200bddcd675d8a915b4c9369 363 PANTHER PTHR37825 2 363 7.1E-91 T 22-04-2016 SII_RS07335 edfc1c7d200bddcd675d8a915b4c9369 363 PANTHER PTHR37825:SF1 2 363 7.1E-91 T 22-04-2016 SII_RS07335 edfc1c7d200bddcd675d8a915b4c9369 363 Hamap MF_01539 UPF0348 protein . 2 361 33.748 T 22-04-2016 IPR008513 Uncharacterised protein family UPF0348 SII_RS07335 edfc1c7d200bddcd675d8a915b4c9369 363 SUPERFAMILY SSF52374 10 138 2.41E-17 T 22-04-2016 SII_RS07335 edfc1c7d200bddcd675d8a915b4c9369 363 SUPERFAMILY SSF52374 186 211 2.41E-17 T 22-04-2016 SII_RS07335 edfc1c7d200bddcd675d8a915b4c9369 363 Pfam PF05636 HIGH Nucleotidyl Transferase 1 348 1.1E-107 T 22-04-2016 IPR008513 Uncharacterised protein family UPF0348 SII_RS07335 edfc1c7d200bddcd675d8a915b4c9369 363 Gene3D G3DSA:3.40.50.620 1 214 6.9E-73 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SII_RS00635 980e6925732b65051ed4ed926bc8638f 739 Pfam PF00905 Penicillin binding protein transpeptidase domain 379 637 3.1E-38 T 22-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 SII_RS00635 980e6925732b65051ed4ed926bc8638f 739 PANTHER PTHR32282 36 659 5.4E-197 T 22-04-2016 SII_RS00635 980e6925732b65051ed4ed926bc8638f 739 Gene3D G3DSA:3.40.710.10 280 684 2.0E-95 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SII_RS00635 980e6925732b65051ed4ed926bc8638f 739 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 119 658 2.2E-163 T 22-04-2016 SII_RS00635 980e6925732b65051ed4ed926bc8638f 739 SUPERFAMILY SSF56601 315 664 4.6E-94 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SII_RS00635 980e6925732b65051ed4ed926bc8638f 739 SUPERFAMILY SSF56601 260 282 4.6E-94 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SII_RS00635 980e6925732b65051ed4ed926bc8638f 739 SUPERFAMILY SSF53955 98 299 2.02E-66 T 22-04-2016 IPR023346 Lysozyme-like domain SII_RS00635 980e6925732b65051ed4ed926bc8638f 739 Gene3D G3DSA:1.10.3810.10 109 279 1.2E-67 T 22-04-2016 SII_RS00635 980e6925732b65051ed4ed926bc8638f 739 Pfam PF00912 Transglycosylase 112 278 9.3E-60 T 22-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 SII_RS00635 980e6925732b65051ed4ed926bc8638f 739 PANTHER PTHR32282:SF5 36 659 5.4E-197 T 22-04-2016 SII_RS07365 03575125d65f9d9b8a408e89324e588f 212 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 24 210 29.768 T 22-04-2016 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: REACT_11193|UniPathway: UPA00253 SII_RS07365 03575125d65f9d9b8a408e89324e588f 212 Pfam PF01467 Cytidylyltransferase-like 28 183 1.2E-32 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 SII_RS07365 03575125d65f9d9b8a408e89324e588f 212 Gene3D G3DSA:3.40.50.620 21 210 7.0E-62 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SII_RS07365 03575125d65f9d9b8a408e89324e588f 212 SUPERFAMILY SSF52374 24 210 1.75E-48 T 22-04-2016 SII_RS07365 03575125d65f9d9b8a408e89324e588f 212 PANTHER PTHR12039 3 209 4.4E-54 T 22-04-2016 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: REACT_11193|UniPathway: UPA00253 SII_RS07365 03575125d65f9d9b8a408e89324e588f 212 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 26 89 2.0E-7 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 SII_RS07365 03575125d65f9d9b8a408e89324e588f 212 TIGRFAM TIGR00482 TIGR00482: nicotinate (nicotinamide) nucleotide adenylyltransferase 28 209 2.7E-50 T 22-04-2016 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: REACT_11193|UniPathway: UPA00253 SII_RS06280 33beed5eb0968db7f736fafd84239ad4 105 PIRSF PIRSF021439 1 105 2.0E-35 T 22-04-2016 IPR010377 Initiation control protein YabA GO:0006260 SII_RS06280 33beed5eb0968db7f736fafd84239ad4 105 PANTHER PTHR41240 2 105 4.6E-34 T 22-04-2016 SII_RS06280 33beed5eb0968db7f736fafd84239ad4 105 Hamap MF_01159 Initiation-control protein YabA. 1 104 22.971 T 22-04-2016 IPR010377 Initiation control protein YabA GO:0006260 SII_RS06280 33beed5eb0968db7f736fafd84239ad4 105 Pfam PF06156 Protein of unknown function (DUF972) 1 99 9.6E-32 T 22-04-2016 IPR010377 Initiation control protein YabA GO:0006260 SII_RS02920 3eb2488826aee2992108a18f984e77cd 155 Pfam PF12732 YtxH-like protein 5 74 1.8E-15 T 22-04-2016 IPR024623 Uncharacterised protein family YtxH SII_RS01970 dfcedaf55e2bea35c1a52174e80ce372 180 Gene3D G3DSA:1.20.120.450 4 147 1.0E-6 T 22-04-2016 IPR027369 DinB/YfiT-like putative metal-dependent hydrolase SII_RS01970 dfcedaf55e2bea35c1a52174e80ce372 180 PANTHER PTHR40658 1 180 3.4E-98 T 22-04-2016 SII_RS01970 dfcedaf55e2bea35c1a52174e80ce372 180 SUPERFAMILY SSF109854 4 153 1.68E-5 T 22-04-2016 SII_RS01970 dfcedaf55e2bea35c1a52174e80ce372 180 PIRSF PIRSF031551 1 180 1.4E-61 T 22-04-2016 IPR012550 Protein of unknown function DUF1706 SII_RS01970 dfcedaf55e2bea35c1a52174e80ce372 180 Pfam PF08020 Protein of unknown function (DUF1706) 1 175 1.9E-56 T 22-04-2016 IPR012550 Protein of unknown function DUF1706 SII_RS01970 dfcedaf55e2bea35c1a52174e80ce372 180 PANTHER PTHR40658:SF1 1 180 3.4E-98 T 22-04-2016 SII_RS02890 80b439fcacabe97a72d475d182598c26 147 PANTHER PTHR41243 1 147 5.4E-61 T 22-04-2016 SII_RS02890 80b439fcacabe97a72d475d182598c26 147 Pfam PF10263 SprT-like family 8 142 2.8E-14 T 22-04-2016 IPR006640 SprT-like SII_RS02890 80b439fcacabe97a72d475d182598c26 147 PANTHER PTHR41243:SF1 1 147 5.4E-61 T 22-04-2016 SII_RS02890 80b439fcacabe97a72d475d182598c26 147 SMART SM00731 1 142 4.1E-43 T 22-04-2016 IPR006640 SprT-like SII_RS08330 c369c996ac510195e977988f07257608 93 Gene3D G3DSA:3.40.50.270 1 92 6.8E-17 T 22-04-2016 SII_RS08330 c369c996ac510195e977988f07257608 93 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 3 89 5.0E-15 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 SII_RS08330 c369c996ac510195e977988f07257608 93 SUPERFAMILY SSF52794 1 92 4.97E-21 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 SII_RS08330 c369c996ac510195e977988f07257608 93 PANTHER PTHR33843 1 93 4.6E-16 T 22-04-2016 SII_RS04470 56249bc24e8b0a8e2d8e881457216dda 115 SUPERFAMILY SSF50104 1 114 9.83E-48 T 22-04-2016 IPR008991 Translation protein SH3-like domain SII_RS04470 56249bc24e8b0a8e2d8e881457216dda 115 PANTHER PTHR15680 1 115 2.1E-54 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SII_RS04470 56249bc24e8b0a8e2d8e881457216dda 115 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 4 113 4.6E-50 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SII_RS04470 56249bc24e8b0a8e2d8e881457216dda 115 Pfam PF01245 Ribosomal protein L19 4 112 2.2E-52 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SII_RS04470 56249bc24e8b0a8e2d8e881457216dda 115 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 2 114 31.957 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SII_RS04470 56249bc24e8b0a8e2d8e881457216dda 115 PIRSF PIRSF002191 1 115 9.8E-51 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SII_RS04470 56249bc24e8b0a8e2d8e881457216dda 115 ProSitePatterns PS01015 Ribosomal protein L19 signature. 86 101 - T 22-04-2016 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SII_RS04470 56249bc24e8b0a8e2d8e881457216dda 115 PRINTS PR00061 Ribosomal protein L19 signature 4 33 9.8E-43 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SII_RS04470 56249bc24e8b0a8e2d8e881457216dda 115 PRINTS PR00061 Ribosomal protein L19 signature 88 113 9.8E-43 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SII_RS04470 56249bc24e8b0a8e2d8e881457216dda 115 PRINTS PR00061 Ribosomal protein L19 signature 34 63 9.8E-43 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SII_RS08275 96be56d3111fcef85a0a7db633b10700 423 SUPERFAMILY SSF50156 176 276 2.82E-9 T 22-04-2016 IPR001478 PDZ domain GO:0005515 SII_RS08275 96be56d3111fcef85a0a7db633b10700 423 Gene3D G3DSA:2.30.42.10 172 277 1.0E-14 T 22-04-2016 IPR001478 PDZ domain GO:0005515 SII_RS08275 96be56d3111fcef85a0a7db633b10700 423 PANTHER PTHR22939 120 140 3.1E-57 T 22-04-2016 SII_RS08275 96be56d3111fcef85a0a7db633b10700 423 PANTHER PTHR22939 203 423 3.1E-57 T 22-04-2016 SII_RS08275 96be56d3111fcef85a0a7db633b10700 423 PANTHER PTHR22939:SF78 120 140 3.1E-57 T 22-04-2016 SII_RS08275 96be56d3111fcef85a0a7db633b10700 423 PANTHER PTHR22939:SF78 203 423 3.1E-57 T 22-04-2016 SII_RS08275 96be56d3111fcef85a0a7db633b10700 423 Pfam PF02163 Peptidase family M50 10 409 2.4E-75 T 22-04-2016 IPR008915 Peptidase M50 GO:0004222|GO:0006508 SII_RS00830 8a5b3d4079dbf39ce392ca8f58808d1e 536 Pfam PF04740 LXG domain of WXG superfamily 3 186 3.7E-17 T 22-04-2016 IPR006829 LXG domain SII_RS01385 22c41d161dc1d4d1914fa9c95bc04abc 217 Pfam PF02361 Cobalt transport protein 7 149 3.9E-5 T 22-04-2016 IPR003339 ABC/ECF transporter, transmembrane component SII_RS02680 4f2e9786237d4c13bbda349c4efcc803 424 PIRSF PIRSF005850 1 423 4.8E-154 T 22-04-2016 IPR019219 Protein of unknown function DUF2130 SII_RS02680 4f2e9786237d4c13bbda349c4efcc803 424 Pfam PF09903 Uncharacterized protein conserved in bacteria (DUF2130) 151 409 3.7E-96 T 22-04-2016 IPR019219 Protein of unknown function DUF2130 SII_RS05065 7632452ff1ac0e0a00eed9306d33349c 209 Pfam PF13346 ABC-2 family transporter protein 4 204 1.2E-29 T 22-04-2016 IPR025699 ABC-2 membrane transporter-like SII_RS05000 31785a14e5de76cef57a0e6eda5c7379 591 PRINTS PR01779 Lantibiotic leader peptide processing protein signature 255 270 6.7E-21 T 22-04-2016 IPR008357 Lantibiotic leader peptide-processing serine protease GO:0004252|GO:0006508 SII_RS05000 31785a14e5de76cef57a0e6eda5c7379 591 PRINTS PR01779 Lantibiotic leader peptide processing protein signature 157 169 6.7E-21 T 22-04-2016 IPR008357 Lantibiotic leader peptide-processing serine protease GO:0004252|GO:0006508 SII_RS05000 31785a14e5de76cef57a0e6eda5c7379 591 PRINTS PR01779 Lantibiotic leader peptide processing protein signature 410 424 6.7E-21 T 22-04-2016 IPR008357 Lantibiotic leader peptide-processing serine protease GO:0004252|GO:0006508 SII_RS05000 31785a14e5de76cef57a0e6eda5c7379 591 PRINTS PR01779 Lantibiotic leader peptide processing protein signature 310 325 6.7E-21 T 22-04-2016 IPR008357 Lantibiotic leader peptide-processing serine protease GO:0004252|GO:0006508 SII_RS05000 31785a14e5de76cef57a0e6eda5c7379 591 PRINTS PR00723 Subtilisin serine protease family (S8) signature 180 199 5.7E-11 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related SII_RS05000 31785a14e5de76cef57a0e6eda5c7379 591 PRINTS PR00723 Subtilisin serine protease family (S8) signature 232 245 5.7E-11 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related SII_RS05000 31785a14e5de76cef57a0e6eda5c7379 591 PRINTS PR00723 Subtilisin serine protease family (S8) signature 439 455 5.7E-11 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related SII_RS05000 31785a14e5de76cef57a0e6eda5c7379 591 PANTHER PTHR10795 1 6 1.3E-23 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related SII_RS05000 31785a14e5de76cef57a0e6eda5c7379 591 PANTHER PTHR10795:SF419 359 455 1.3E-23 T 22-04-2016 SII_RS05000 31785a14e5de76cef57a0e6eda5c7379 591 PANTHER PTHR10795:SF419 1 6 1.3E-23 T 22-04-2016 SII_RS05000 31785a14e5de76cef57a0e6eda5c7379 591 PANTHER PTHR10795 359 455 1.3E-23 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related SII_RS05000 31785a14e5de76cef57a0e6eda5c7379 591 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 236 246 - T 22-04-2016 IPR022398 Peptidase S8, subtilisin, His-active site SII_RS05000 31785a14e5de76cef57a0e6eda5c7379 591 Pfam PF00082 Subtilase family 181 473 2.4E-37 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 SII_RS05000 31785a14e5de76cef57a0e6eda5c7379 591 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 185 196 - T 22-04-2016 IPR023827 Peptidase S8, subtilisin, Asp-active site SII_RS05000 31785a14e5de76cef57a0e6eda5c7379 591 PANTHER PTHR10795 156 339 1.3E-23 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related SII_RS05000 31785a14e5de76cef57a0e6eda5c7379 591 PANTHER PTHR10795:SF419 156 339 1.3E-23 T 22-04-2016 SII_RS05000 31785a14e5de76cef57a0e6eda5c7379 591 Gene3D G3DSA:3.40.50.200 155 479 1.1E-45 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 SII_RS05000 31785a14e5de76cef57a0e6eda5c7379 591 SUPERFAMILY SSF52743 182 475 3.8E-46 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 SII_RS05000 31785a14e5de76cef57a0e6eda5c7379 591 PIRSF PIRSF037875 3 555 1.0E-151 T 22-04-2016 IPR008357 Lantibiotic leader peptide-processing serine protease GO:0004252|GO:0006508 SII_RS03060 ca05217c0408a4029a26410831caddef 211 Hamap MF_00551 Uridine kinase [udk]. 2 206 42.64 T 22-04-2016 IPR026008 Uridine kinase GO:0004849|GO:0005524|GO:0016773 KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 SII_RS03060 ca05217c0408a4029a26410831caddef 211 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 7 192 6.8E-48 T 22-04-2016 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0008152|GO:0016301 SII_RS03060 ca05217c0408a4029a26410831caddef 211 Gene3D G3DSA:3.40.50.300 4 206 1.5E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS03060 ca05217c0408a4029a26410831caddef 211 TIGRFAM TIGR00235 udk: uridine kinase 3 205 8.2E-87 T 22-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 SII_RS03060 ca05217c0408a4029a26410831caddef 211 SUPERFAMILY SSF52540 3 197 1.48E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS03060 ca05217c0408a4029a26410831caddef 211 PRINTS PR00988 Uridine kinase signature 35 46 1.7E-38 T 22-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 SII_RS03060 ca05217c0408a4029a26410831caddef 211 PRINTS PR00988 Uridine kinase signature 150 161 1.7E-38 T 22-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 SII_RS03060 ca05217c0408a4029a26410831caddef 211 PRINTS PR00988 Uridine kinase signature 136 146 1.7E-38 T 22-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 SII_RS03060 ca05217c0408a4029a26410831caddef 211 PRINTS PR00988 Uridine kinase signature 5 22 1.7E-38 T 22-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 SII_RS03060 ca05217c0408a4029a26410831caddef 211 PRINTS PR00988 Uridine kinase signature 172 185 1.7E-38 T 22-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 SII_RS03060 ca05217c0408a4029a26410831caddef 211 PRINTS PR00988 Uridine kinase signature 80 95 1.7E-38 T 22-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 SII_RS03060 ca05217c0408a4029a26410831caddef 211 PANTHER PTHR10285 2 207 6.4E-93 T 22-04-2016 SII_RS02325 deb82f30f8f6e088575f3cb01be04ade 297 Pfam PF13732 Domain of unknown function (DUF4162) 210 289 1.8E-14 T 22-04-2016 IPR025302 Domain of unknown function DUF4162 SII_RS02325 deb82f30f8f6e088575f3cb01be04ade 297 SMART SM00382 26 213 2.0E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain SII_RS02325 deb82f30f8f6e088575f3cb01be04ade 297 ProSitePatterns PS00211 ABC transporters family signature. 129 143 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SII_RS02325 deb82f30f8f6e088575f3cb01be04ade 297 PANTHER PTHR24220 3 233 1.0E-128 T 22-04-2016 SII_RS02325 deb82f30f8f6e088575f3cb01be04ade 297 PANTHER PTHR24220:SF450 3 233 1.0E-128 T 22-04-2016 SII_RS02325 deb82f30f8f6e088575f3cb01be04ade 297 Gene3D G3DSA:3.40.50.300 1 223 1.8E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS02325 deb82f30f8f6e088575f3cb01be04ade 297 Pfam PF00005 ABC transporter 19 156 5.5E-26 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SII_RS02325 deb82f30f8f6e088575f3cb01be04ade 297 SUPERFAMILY SSF52540 1 222 1.27E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS05075 52bf1a70c6ffc9a50518b0f5040ba42d 126 PANTHER PTHR38445:SF2 1 122 7.9E-19 T 22-04-2016 SII_RS05075 52bf1a70c6ffc9a50518b0f5040ba42d 126 SMART SM00345 17 76 1.1E-14 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SII_RS05075 52bf1a70c6ffc9a50518b0f5040ba42d 126 SUPERFAMILY SSF46785 6 88 4.46E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SII_RS05075 52bf1a70c6ffc9a50518b0f5040ba42d 126 PANTHER PTHR38445 1 122 7.9E-19 T 22-04-2016 SII_RS05075 52bf1a70c6ffc9a50518b0f5040ba42d 126 Gene3D G3DSA:1.10.10.10 3 77 5.7E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SII_RS05075 52bf1a70c6ffc9a50518b0f5040ba42d 126 Pfam PF00392 Bacterial regulatory proteins, gntR family 14 76 3.6E-15 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SII_RS00595 817f181218bdca0f3657996e02eaeea1 147 PANTHER PTHR18964:SF125 7 145 1.5E-23 T 22-04-2016 SII_RS00595 817f181218bdca0f3657996e02eaeea1 147 SMART SM00347 29 131 6.0E-14 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SII_RS00595 817f181218bdca0f3657996e02eaeea1 147 Pfam PF01047 MarR family 36 92 1.7E-11 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SII_RS00595 817f181218bdca0f3657996e02eaeea1 147 Gene3D G3DSA:1.10.10.10 10 143 2.3E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SII_RS00595 817f181218bdca0f3657996e02eaeea1 147 PANTHER PTHR18964 7 145 1.5E-23 T 22-04-2016 SII_RS00595 817f181218bdca0f3657996e02eaeea1 147 SUPERFAMILY SSF46785 9 144 7.4E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SII_RS02250 82f66bcd0feb4ac839aae0ccba86d92c 415 Gene3D G3DSA:1.25.40.10 225 329 1.8E-12 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SII_RS02250 82f66bcd0feb4ac839aae0ccba86d92c 415 Gene3D G3DSA:1.25.40.10 336 404 1.4E-6 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SII_RS02250 82f66bcd0feb4ac839aae0ccba86d92c 415 Gene3D G3DSA:1.25.40.10 189 224 4.5E-9 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SII_RS02250 82f66bcd0feb4ac839aae0ccba86d92c 415 PANTHER PTHR23083:SF412 9 410 1.3E-42 T 22-04-2016 SII_RS02250 82f66bcd0feb4ac839aae0ccba86d92c 415 SUPERFAMILY SSF48452 77 404 2.91E-18 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SII_RS02250 82f66bcd0feb4ac839aae0ccba86d92c 415 PANTHER PTHR23083 9 410 1.3E-42 T 22-04-2016 SII_RS02250 82f66bcd0feb4ac839aae0ccba86d92c 415 SMART SM00028 274 307 490.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SII_RS02250 82f66bcd0feb4ac839aae0ccba86d92c 415 SMART SM00028 173 206 9.3E-5 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SII_RS02250 82f66bcd0feb4ac839aae0ccba86d92c 415 SMART SM00028 69 101 340.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SII_RS02250 82f66bcd0feb4ac839aae0ccba86d92c 415 Pfam PF13181 Tetratricopeptide repeat 174 205 4.5E-6 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SII_RS02250 82f66bcd0feb4ac839aae0ccba86d92c 415 Gene3D G3DSA:1.25.40.10 16 188 7.1E-17 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SII_RS05730 2f66886b66985b161a6cd2ef49a42e72 897 PANTHER PTHR24093 783 895 0.0 T 22-04-2016 SII_RS05730 2f66886b66985b161a6cd2ef49a42e72 897 PANTHER PTHR24093 11 759 0.0 T 22-04-2016 SII_RS05730 2f66886b66985b161a6cd2ef49a42e72 897 Gene3D G3DSA:3.40.1110.10 325 527 9.1E-55 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 SII_RS05730 2f66886b66985b161a6cd2ef49a42e72 897 SMART SM00831 9 82 5.5E-29 T 22-04-2016 IPR004014 Cation-transporting P-type ATPase, N-terminal SII_RS05730 2f66886b66985b161a6cd2ef49a42e72 897 Pfam PF00690 Cation transporter/ATPase, N-terminus 11 77 5.4E-23 T 22-04-2016 IPR004014 Cation-transporting P-type ATPase, N-terminal SII_RS05730 2f66886b66985b161a6cd2ef49a42e72 897 SUPERFAMILY SSF81665 234 328 1.7E-130 T 22-04-2016 SII_RS05730 2f66886b66985b161a6cd2ef49a42e72 897 SUPERFAMILY SSF81665 10 123 1.7E-130 T 22-04-2016 SII_RS05730 2f66886b66985b161a6cd2ef49a42e72 897 SUPERFAMILY SSF81665 674 889 1.7E-130 T 22-04-2016 SII_RS05730 2f66886b66985b161a6cd2ef49a42e72 897 Gene3D G3DSA:1.20.1110.10 62 117 1.3E-122 T 22-04-2016 IPR023298 P-type ATPase, transmembrane domain SII_RS05730 2f66886b66985b161a6cd2ef49a42e72 897 Gene3D G3DSA:1.20.1110.10 593 889 1.3E-122 T 22-04-2016 IPR023298 P-type ATPase, transmembrane domain SII_RS05730 2f66886b66985b161a6cd2ef49a42e72 897 SUPERFAMILY SSF81660 341 524 1.34E-47 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 SII_RS05730 2f66886b66985b161a6cd2ef49a42e72 897 SUPERFAMILY SSF81653 123 233 6.93E-31 T 22-04-2016 SII_RS05730 2f66886b66985b161a6cd2ef49a42e72 897 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 591 705 6.3E-34 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 SII_RS05730 2f66886b66985b161a6cd2ef49a42e72 897 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 225 357 1.7E-24 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 SII_RS05730 2f66886b66985b161a6cd2ef49a42e72 897 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 92 186 1.3E-21 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 SII_RS05730 2f66886b66985b161a6cd2ef49a42e72 897 SUPERFAMILY SSF56784 462 728 1.73E-51 T 22-04-2016 IPR023214 HAD-like domain SII_RS05730 2f66886b66985b161a6cd2ef49a42e72 897 Pfam PF00689 Cation transporting ATPase, C-terminus 709 886 3.6E-43 T 22-04-2016 IPR006068 Cation-transporting P-type ATPase, C-terminal SII_RS05730 2f66886b66985b161a6cd2ef49a42e72 897 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 596 612 5.5E-15 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 SII_RS05730 2f66886b66985b161a6cd2ef49a42e72 897 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 656 681 5.5E-15 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 SII_RS05730 2f66886b66985b161a6cd2ef49a42e72 897 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 624 640 5.5E-15 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 SII_RS05730 2f66886b66985b161a6cd2ef49a42e72 897 Pfam PF00702 haloacid dehalogenase-like hydrolase 332 638 1.0E-25 T 22-04-2016 SII_RS05730 2f66886b66985b161a6cd2ef49a42e72 897 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 336 342 - T 22-04-2016 IPR018303 P-type ATPase, phosphorylation site SII_RS05730 2f66886b66985b161a6cd2ef49a42e72 897 Pfam PF00122 E1-E2 ATPase 90 325 2.1E-67 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 SII_RS05730 2f66886b66985b161a6cd2ef49a42e72 897 Gene3D G3DSA:2.70.150.10 118 233 1.1E-43 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 SII_RS05730 2f66886b66985b161a6cd2ef49a42e72 897 Gene3D G3DSA:2.70.150.10 25 61 1.1E-43 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 SII_RS05730 2f66886b66985b161a6cd2ef49a42e72 897 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 334 348 1.5E-38 T 22-04-2016 SII_RS05730 2f66886b66985b161a6cd2ef49a42e72 897 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 648 660 1.5E-38 T 22-04-2016 SII_RS05730 2f66886b66985b161a6cd2ef49a42e72 897 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 170 184 1.5E-38 T 22-04-2016 SII_RS05730 2f66886b66985b161a6cd2ef49a42e72 897 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 520 531 1.5E-38 T 22-04-2016 SII_RS05730 2f66886b66985b161a6cd2ef49a42e72 897 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 624 643 1.5E-38 T 22-04-2016 SII_RS05730 2f66886b66985b161a6cd2ef49a42e72 897 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 542 552 1.5E-38 T 22-04-2016 SII_RS00250 b9cf6906a3e021073a22a4ee89353388 187 SUPERFAMILY SSF53328 3 179 6.02E-53 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SII_RS00250 b9cf6906a3e021073a22a4ee89353388 187 Pfam PF00551 Formyl transferase 3 176 2.1E-48 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SII_RS00250 b9cf6906a3e021073a22a4ee89353388 187 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 4 182 28.344 T 22-04-2016 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|UniPathway: UPA00074 SII_RS00250 b9cf6906a3e021073a22a4ee89353388 187 Gene3D G3DSA:3.40.50.170 3 179 4.6E-62 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SII_RS00250 b9cf6906a3e021073a22a4ee89353388 187 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 3 179 1.6E-58 T 22-04-2016 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|UniPathway: UPA00074 SII_RS00250 b9cf6906a3e021073a22a4ee89353388 187 PANTHER PTHR10520 3 185 3.2E-75 T 22-04-2016 SII_RS08790 3c79f829efd54378891d296b6b275097 208 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 2 204 37.734 T 22-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 SII_RS08790 3c79f829efd54378891d296b6b275097 208 Gene3D G3DSA:2.40.30.10 4 33 9.2E-15 T 22-04-2016 SII_RS08790 3c79f829efd54378891d296b6b275097 208 Gene3D G3DSA:2.40.30.10 155 206 9.2E-15 T 22-04-2016 SII_RS08790 3c79f829efd54378891d296b6b275097 208 Gene3D G3DSA:4.10.960.10 82 154 1.4E-32 T 22-04-2016 SII_RS08790 3c79f829efd54378891d296b6b275097 208 PANTHER PTHR11229 1 208 5.9E-107 T 22-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 SII_RS08790 3c79f829efd54378891d296b6b275097 208 Pfam PF00297 Ribosomal protein L3 97 176 2.0E-14 T 22-04-2016 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SII_RS08790 3c79f829efd54378891d296b6b275097 208 ProSitePatterns PS00474 Ribosomal protein L3 signature. 100 123 - T 22-04-2016 IPR019926 Ribosomal protein L3, conserved site SII_RS08790 3c79f829efd54378891d296b6b275097 208 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 4 201 2.6E-82 T 22-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 SII_RS08790 3c79f829efd54378891d296b6b275097 208 SUPERFAMILY SSF50447 1 206 5.21E-78 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain SII_RS03775 48c0b5c01ea75b3e00c9e06f0924c917 183 Gene3D G3DSA:3.40.630.30 11 178 2.9E-43 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SII_RS03775 48c0b5c01ea75b3e00c9e06f0924c917 183 PANTHER PTHR13256:SF31 1 183 8.6E-94 T 22-04-2016 SII_RS03775 48c0b5c01ea75b3e00c9e06f0924c917 183 Pfam PF13302 Acetyltransferase (GNAT) domain 17 153 3.8E-29 T 22-04-2016 IPR000182 GNAT domain GO:0008080 SII_RS03775 48c0b5c01ea75b3e00c9e06f0924c917 183 SUPERFAMILY SSF55729 10 174 1.32E-37 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SII_RS03775 48c0b5c01ea75b3e00c9e06f0924c917 183 PANTHER PTHR13256 1 183 8.6E-94 T 22-04-2016 SII_RS08455 c24ad21874c7e7b14c96569977d9b517 226 Pfam PF05257 CHAP domain 119 197 3.5E-14 T 22-04-2016 IPR007921 CHAP domain SII_RS08455 c24ad21874c7e7b14c96569977d9b517 226 PRINTS PR01852 Streptococcal non-M secreted SibA protein signature 122 144 3.2E-30 T 22-04-2016 IPR009148 Streptococcal non-M secreted SibA SII_RS08455 c24ad21874c7e7b14c96569977d9b517 226 PRINTS PR01852 Streptococcal non-M secreted SibA protein signature 190 213 3.2E-30 T 22-04-2016 IPR009148 Streptococcal non-M secreted SibA SII_RS08455 c24ad21874c7e7b14c96569977d9b517 226 PRINTS PR01852 Streptococcal non-M secreted SibA protein signature 147 171 3.2E-30 T 22-04-2016 IPR009148 Streptococcal non-M secreted SibA SII_RS08455 c24ad21874c7e7b14c96569977d9b517 226 SMART SM00257 34 78 8.8E-10 T 22-04-2016 IPR018392 LysM domain SII_RS08455 c24ad21874c7e7b14c96569977d9b517 226 Gene3D G3DSA:3.10.350.10 32 77 2.2E-13 T 22-04-2016 IPR018392 LysM domain SII_RS08455 c24ad21874c7e7b14c96569977d9b517 226 SUPERFAMILY SSF54106 33 77 3.14E-9 T 22-04-2016 IPR018392 LysM domain SII_RS08455 c24ad21874c7e7b14c96569977d9b517 226 SUPERFAMILY SSF54001 97 226 9.32E-29 T 22-04-2016 SII_RS08455 c24ad21874c7e7b14c96569977d9b517 226 Pfam PF01476 LysM domain 35 77 9.8E-7 T 22-04-2016 IPR018392 LysM domain SII_RS06735 4303b6a652246c7a632383c5d0011853 160 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 52 70 6.3E-34 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 SII_RS06735 4303b6a652246c7a632383c5d0011853 160 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 8 26 6.3E-34 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 SII_RS06735 4303b6a652246c7a632383c5d0011853 160 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 120 139 6.3E-34 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 SII_RS06735 4303b6a652246c7a632383c5d0011853 160 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 76 94 6.3E-34 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 SII_RS06735 4303b6a652246c7a632383c5d0011853 160 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 31 49 6.3E-34 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 SII_RS06735 4303b6a652246c7a632383c5d0011853 160 PIRSF PIRSF006160 4 160 8.2E-63 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 SII_RS06735 4303b6a652246c7a632383c5d0011853 160 Hamap MF_00091 S-ribosylhomocysteine lyase [luxS]. 4 158 34.849 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 SII_RS06735 4303b6a652246c7a632383c5d0011853 160 SUPERFAMILY SSF63411 7 158 1.1E-60 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 SII_RS06735 4303b6a652246c7a632383c5d0011853 160 Pfam PF02664 S-Ribosylhomocysteinase (LuxS) 7 151 2.7E-52 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 SII_RS06735 4303b6a652246c7a632383c5d0011853 160 Gene3D G3DSA:3.30.1360.80 7 159 3.2E-65 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 SII_RS06735 4303b6a652246c7a632383c5d0011853 160 PANTHER PTHR35799 5 160 5.8E-89 T 22-04-2016 SII_RS06735 4303b6a652246c7a632383c5d0011853 160 ProDom PD013172 LYASE SYNTHESIS LUXS AUTOINDUCER-2 PRODUCTION AUTOINDUCER S-RIBOSYLHOMOCYSTEINE AI-2 QUORUM SENSING 11 153 3.0E-74 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 SII_RS08920 e7345bb93a7f4e66658e9708d1358b27 481 Pfam PF02916 DNA polymerase processivity factor 68 183 1.4E-40 T 22-04-2016 IPR004190 DNA polymerase processivity factor GO:0006260 SII_RS08920 e7345bb93a7f4e66658e9708d1358b27 481 Pfam PF03816 Cell envelope-related transcriptional attenuator domain 245 390 8.1E-39 T 22-04-2016 IPR004474 Cell envelope-related transcriptional attenuator domain SII_RS08920 e7345bb93a7f4e66658e9708d1358b27 481 SUPERFAMILY SSF53850 97 200 1.9E-5 T 22-04-2016 SII_RS08920 e7345bb93a7f4e66658e9708d1358b27 481 TIGRFAM TIGR00350 lytR_cpsA_psr: cell envelope-related function transcriptional attenuator common domain 245 390 1.5E-27 T 22-04-2016 IPR004474 Cell envelope-related transcriptional attenuator domain SII_RS08920 e7345bb93a7f4e66658e9708d1358b27 481 PANTHER PTHR33392 218 422 6.5E-42 T 22-04-2016 SII_RS06780 7aee0d6e3904ef40ed3e8262e4bb8bc4 445 ProSitePatterns PS00139 Eukaryotic thiol (cysteine) proteases cysteine active site. 63 74 - T 22-04-2016 IPR000169 Cysteine peptidase, cysteine active site SII_RS06780 7aee0d6e3904ef40ed3e8262e4bb8bc4 445 PANTHER PTHR10363:SF4 4 444 1.1E-263 T 22-04-2016 SII_RS06780 7aee0d6e3904ef40ed3e8262e4bb8bc4 445 SUPERFAMILY SSF54001 8 443 3.09E-127 T 22-04-2016 SII_RS06780 7aee0d6e3904ef40ed3e8262e4bb8bc4 445 Gene3D G3DSA:3.90.70.10 51 443 2.1E-173 T 22-04-2016 SII_RS06780 7aee0d6e3904ef40ed3e8262e4bb8bc4 445 PANTHER PTHR10363 4 444 1.1E-263 T 22-04-2016 IPR004134 Peptidase C1B, bleomycin hydrolase GO:0004197|GO:0006508 SII_RS06780 7aee0d6e3904ef40ed3e8262e4bb8bc4 445 ProSitePatterns PS00639 Eukaryotic thiol (cysteine) proteases histidine active site. 361 371 - T 22-04-2016 IPR025660 Cysteine peptidase, histidine active site SII_RS06780 7aee0d6e3904ef40ed3e8262e4bb8bc4 445 PIRSF PIRSF005700 1 444 7.0E-177 T 22-04-2016 IPR004134 Peptidase C1B, bleomycin hydrolase GO:0004197|GO:0006508 SII_RS06780 7aee0d6e3904ef40ed3e8262e4bb8bc4 445 Pfam PF03051 Peptidase C1-like family 4 440 2.3E-203 T 22-04-2016 IPR004134 Peptidase C1B, bleomycin hydrolase GO:0004197|GO:0006508 SII_RS07925 fdb703f1c9f7d47dff7eb3c59edf49da 130 Gene3D G3DSA:3.30.230.10 5 130 6.3E-52 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SII_RS07925 fdb703f1c9f7d47dff7eb3c59edf49da 130 ProSitePatterns PS00360 Ribosomal protein S9 signature. 69 87 - T 22-04-2016 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 SII_RS07925 fdb703f1c9f7d47dff7eb3c59edf49da 130 PANTHER PTHR21569 1 130 2.4E-68 T 22-04-2016 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 SII_RS07925 fdb703f1c9f7d47dff7eb3c59edf49da 130 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 1 130 33.527 T 22-04-2016 IPR023035 Ribosomal protein S9, bacterial/plastid SII_RS07925 fdb703f1c9f7d47dff7eb3c59edf49da 130 SUPERFAMILY SSF54211 6 130 1.29E-48 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SII_RS07925 fdb703f1c9f7d47dff7eb3c59edf49da 130 Pfam PF00380 Ribosomal protein S9/S16 10 130 1.9E-49 T 22-04-2016 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 SII_RS07735 d77b66b8fb9bef9a4b394ac7679155c1 259 PANTHER PTHR32502 1 242 3.0E-30 T 22-04-2016 SII_RS07735 d77b66b8fb9bef9a4b394ac7679155c1 259 Pfam PF03609 PTS system sorbose-specific iic component 5 237 7.9E-60 T 22-04-2016 IPR004700 Phosphotransferase system, sorbose-specific IIC subunit GO:0009401|GO:0016021 SII_RS07735 d77b66b8fb9bef9a4b394ac7679155c1 259 PANTHER PTHR32502:SF8 1 242 3.0E-30 T 22-04-2016 SII_RS06190 e524077f9c37dfffd00c1f3bb029da40 252 Pfam PF05857 TraX protein 9 246 4.4E-23 T 22-04-2016 IPR008875 TraX SII_RS04710 2b8bfb5f171a49d48b05be13c136776c 551 Pfam PF00581 Rhodanese-like domain 455 540 1.3E-6 T 22-04-2016 IPR001763 Rhodanese-like domain SII_RS04710 2b8bfb5f171a49d48b05be13c136776c 551 SMART SM00450 451 545 5.3E-9 T 22-04-2016 IPR001763 Rhodanese-like domain SII_RS04710 2b8bfb5f171a49d48b05be13c136776c 551 SUPERFAMILY SSF51905 151 314 2.35E-32 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SII_RS04710 2b8bfb5f171a49d48b05be13c136776c 551 Gene3D G3DSA:3.40.250.10 450 540 7.3E-18 T 22-04-2016 IPR001763 Rhodanese-like domain SII_RS04710 2b8bfb5f171a49d48b05be13c136776c 551 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 2 304 1.1E-56 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SII_RS04710 2b8bfb5f171a49d48b05be13c136776c 551 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 327 427 1.7E-12 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 SII_RS04710 2b8bfb5f171a49d48b05be13c136776c 551 SUPERFAMILY SSF51905 1 195 2.07E-41 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SII_RS04710 2b8bfb5f171a49d48b05be13c136776c 551 SUPERFAMILY SSF55424 320 442 8.42E-32 T 22-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 SII_RS04710 2b8bfb5f171a49d48b05be13c136776c 551 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 233 247 1.0E-14 T 22-04-2016 SII_RS04710 2b8bfb5f171a49d48b05be13c136776c 551 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 2 24 1.0E-14 T 22-04-2016 SII_RS04710 2b8bfb5f171a49d48b05be13c136776c 551 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 274 281 1.0E-14 T 22-04-2016 SII_RS04710 2b8bfb5f171a49d48b05be13c136776c 551 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 150 175 1.0E-14 T 22-04-2016 SII_RS04710 2b8bfb5f171a49d48b05be13c136776c 551 Gene3D G3DSA:3.50.50.60 113 313 1.9E-54 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SII_RS04710 2b8bfb5f171a49d48b05be13c136776c 551 Gene3D G3DSA:3.30.390.30 332 443 6.8E-42 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 SII_RS04710 2b8bfb5f171a49d48b05be13c136776c 551 PANTHER PTHR22912 1 438 1.3E-165 T 22-04-2016 SII_RS04710 2b8bfb5f171a49d48b05be13c136776c 551 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 103 121 1.5E-19 T 22-04-2016 SII_RS04710 2b8bfb5f171a49d48b05be13c136776c 551 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 232 248 1.5E-19 T 22-04-2016 SII_RS04710 2b8bfb5f171a49d48b05be13c136776c 551 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 3 22 1.5E-19 T 22-04-2016 SII_RS04710 2b8bfb5f171a49d48b05be13c136776c 551 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 259 281 1.5E-19 T 22-04-2016 SII_RS04710 2b8bfb5f171a49d48b05be13c136776c 551 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 150 168 1.5E-19 T 22-04-2016 SII_RS04710 2b8bfb5f171a49d48b05be13c136776c 551 PANTHER PTHR22912:SF140 1 438 1.3E-165 T 22-04-2016 SII_RS04710 2b8bfb5f171a49d48b05be13c136776c 551 SUPERFAMILY SSF52821 431 539 1.87E-18 T 22-04-2016 IPR001763 Rhodanese-like domain SII_RS04710 2b8bfb5f171a49d48b05be13c136776c 551 Gene3D G3DSA:3.50.50.60 1 112 2.9E-20 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SII_RS03740 439e68899b63264666d560c4835a340e 236 Pfam PF05656 Protein of unknown function (DUF805) 12 153 3.0E-13 T 22-04-2016 IPR008523 Protein of unknown function DUF805 GO:0016021 SII_RS03740 439e68899b63264666d560c4835a340e 236 PANTHER PTHR34980 1 217 4.9E-12 T 22-04-2016 SII_RS03740 439e68899b63264666d560c4835a340e 236 PANTHER PTHR34980:SF2 1 217 4.9E-12 T 22-04-2016 SII_RS05565 1278a237c5011710869820c38d31388e 440 Gene3D G3DSA:1.20.120.20 296 371 5.4E-4 T 22-04-2016 SII_RS07565 bcbb22e03b0d09517e5b512fcac86689 484 Pfam PF00251 Glycosyl hydrolases family 32 N-terminal domain 37 340 1.9E-85 T 22-04-2016 IPR013148 Glycosyl hydrolase family 32, N-terminal SII_RS07565 bcbb22e03b0d09517e5b512fcac86689 484 PANTHER PTHR30175:SF8 18 456 8.5E-192 T 22-04-2016 SII_RS07565 bcbb22e03b0d09517e5b512fcac86689 484 PANTHER PTHR30175 18 456 8.5E-192 T 22-04-2016 SII_RS07565 bcbb22e03b0d09517e5b512fcac86689 484 ProSitePatterns PS00609 Glycosyl hydrolases family 32 active site. 37 50 - T 22-04-2016 IPR018053 Glycoside hydrolase, family 32, active site GO:0004553|GO:0005975 KEGG: 00052+3.2.1.26|KEGG: 00500+3.2.1.26 SII_RS07565 bcbb22e03b0d09517e5b512fcac86689 484 TIGRFAM TIGR01322 scrB_fam: sucrose-6-phosphate hydrolase 21 456 8.5E-162 T 22-04-2016 IPR006232 Sucrose-6-phosphate hydrolase GO:0004564|GO:0005737|GO:0005975 KEGG: 00052+3.2.1.26|KEGG: 00500+3.2.1.26|UniPathway: UPA00238 SII_RS07565 bcbb22e03b0d09517e5b512fcac86689 484 Gene3D G3DSA:2.115.10.20 43 246 2.9E-14 T 22-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain SII_RS07565 bcbb22e03b0d09517e5b512fcac86689 484 SUPERFAMILY SSF49899 341 478 8.7E-26 T 22-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain SII_RS07565 bcbb22e03b0d09517e5b512fcac86689 484 Pfam PF08244 Glycosyl hydrolases family 32 C terminal 375 446 2.8E-7 T 22-04-2016 IPR013189 Glycosyl hydrolase family 32, C-terminal SII_RS07565 bcbb22e03b0d09517e5b512fcac86689 484 SUPERFAMILY SSF75005 28 341 4.28E-85 T 22-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain SII_RS07565 bcbb22e03b0d09517e5b512fcac86689 484 SMART SM00640 37 446 1.3E-110 T 22-04-2016 IPR001362 Glycoside hydrolase, family 32 GO:0004553|GO:0005975 SII_RS07565 bcbb22e03b0d09517e5b512fcac86689 484 Gene3D G3DSA:2.60.120.560 333 477 9.5E-31 T 22-04-2016 IPR013189 Glycosyl hydrolase family 32, C-terminal SII_RS07130 a19e6505e79962585ef1795478e4acab 136 Gene3D G3DSA:3.30.428.10 2 118 1.6E-41 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 SII_RS07130 a19e6505e79962585ef1795478e4acab 136 PANTHER PTHR23089 3 111 6.4E-64 T 22-04-2016 IPR001310 Histidine triad (HIT) protein SII_RS07130 a19e6505e79962585ef1795478e4acab 136 PANTHER PTHR23089:SF14 3 111 6.4E-64 T 22-04-2016 SII_RS07130 a19e6505e79962585ef1795478e4acab 136 Pfam PF01230 HIT domain 12 107 1.4E-25 T 22-04-2016 IPR001310 Histidine triad (HIT) protein SII_RS07130 a19e6505e79962585ef1795478e4acab 136 PRINTS PR00332 Histidine triad family signature 93 103 1.9E-18 T 22-04-2016 IPR001310 Histidine triad (HIT) protein SII_RS07130 a19e6505e79962585ef1795478e4acab 136 PRINTS PR00332 Histidine triad family signature 26 44 1.9E-18 T 22-04-2016 IPR001310 Histidine triad (HIT) protein SII_RS07130 a19e6505e79962585ef1795478e4acab 136 PRINTS PR00332 Histidine triad family signature 5 21 1.9E-18 T 22-04-2016 IPR001310 Histidine triad (HIT) protein SII_RS07130 a19e6505e79962585ef1795478e4acab 136 SUPERFAMILY SSF54197 3 133 9.92E-42 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 SII_RS02860 2d1215f1e74d6d678010341c52827b86 230 Pfam PF06912 Protein of unknown function (DUF1275) 18 214 1.3E-24 T 22-04-2016 IPR010699 Protein of unknown function DUF1275 SII_RS02860 2d1215f1e74d6d678010341c52827b86 230 PANTHER PTHR37314 1 230 7.9E-13 T 22-04-2016 SII_RS02080 8c9f3582348e6aba1257fea3076d7e58 682 Pfam PF00905 Penicillin binding protein transpeptidase domain 348 672 5.2E-73 T 22-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 SII_RS02080 8c9f3582348e6aba1257fea3076d7e58 682 PANTHER PTHR30627:SF2 167 458 1.4E-165 T 22-04-2016 SII_RS02080 8c9f3582348e6aba1257fea3076d7e58 682 PANTHER PTHR30627:SF2 477 682 1.4E-165 T 22-04-2016 SII_RS02080 8c9f3582348e6aba1257fea3076d7e58 682 PANTHER PTHR30627:SF2 1 110 1.4E-165 T 22-04-2016 SII_RS02080 8c9f3582348e6aba1257fea3076d7e58 682 Gene3D G3DSA:3.90.1310.10 199 314 4.3E-26 T 22-04-2016 SII_RS02080 8c9f3582348e6aba1257fea3076d7e58 682 Pfam PF03717 Penicillin-binding Protein dimerisation domain 62 299 1.6E-32 T 22-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 SII_RS02080 8c9f3582348e6aba1257fea3076d7e58 682 Gene3D G3DSA:3.40.710.10 315 679 2.4E-73 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SII_RS02080 8c9f3582348e6aba1257fea3076d7e58 682 SUPERFAMILY SSF56519 57 118 6.93E-27 T 22-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 SII_RS02080 8c9f3582348e6aba1257fea3076d7e58 682 SUPERFAMILY SSF56519 185 315 6.93E-27 T 22-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 SII_RS02080 8c9f3582348e6aba1257fea3076d7e58 682 SUPERFAMILY SSF56601 316 680 1.81E-67 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SII_RS02080 8c9f3582348e6aba1257fea3076d7e58 682 PANTHER PTHR30627 167 458 1.4E-165 T 22-04-2016 SII_RS02080 8c9f3582348e6aba1257fea3076d7e58 682 PANTHER PTHR30627 477 682 1.4E-165 T 22-04-2016 SII_RS02080 8c9f3582348e6aba1257fea3076d7e58 682 PANTHER PTHR30627 1 110 1.4E-165 T 22-04-2016 SII_RS01130 a459e3b63949b860ad7de2775bcd87e8 311 Pfam PF00144 Beta-lactamase 17 299 2.2E-49 T 22-04-2016 IPR001466 Beta-lactamase-related SII_RS01130 a459e3b63949b860ad7de2775bcd87e8 311 SUPERFAMILY SSF56601 4 295 6.37E-60 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SII_RS01130 a459e3b63949b860ad7de2775bcd87e8 311 PANTHER PTHR22935:SF10 3 310 1.4E-48 T 22-04-2016 SII_RS01130 a459e3b63949b860ad7de2775bcd87e8 311 Gene3D G3DSA:3.40.710.10 8 296 7.3E-53 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SII_RS01130 a459e3b63949b860ad7de2775bcd87e8 311 PANTHER PTHR22935 3 310 1.4E-48 T 22-04-2016 SII_RS04645 82d8131643bbd01d8a16bec39402ca7e 405 PRINTS PR00762 Chloride channel signature 316 336 8.0E-10 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 SII_RS04645 82d8131643bbd01d8a16bec39402ca7e 405 PRINTS PR00762 Chloride channel signature 344 360 8.0E-10 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 SII_RS04645 82d8131643bbd01d8a16bec39402ca7e 405 PRINTS PR00762 Chloride channel signature 153 172 8.0E-10 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 SII_RS04645 82d8131643bbd01d8a16bec39402ca7e 405 SUPERFAMILY SSF81340 8 404 6.67E-73 T 22-04-2016 IPR014743 Chloride channel, core GO:0005216|GO:0055085 SII_RS04645 82d8131643bbd01d8a16bec39402ca7e 405 Pfam PF00654 Voltage gated chloride channel 62 391 5.7E-59 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 SII_RS04645 82d8131643bbd01d8a16bec39402ca7e 405 Gene3D G3DSA:1.10.3080.10 14 400 1.7E-40 T 22-04-2016 IPR014743 Chloride channel, core GO:0005216|GO:0055085 SII_RS06340 10c195d8d9585e508005ef12c8a1040a 209 Pfam PF14681 Uracil phosphoribosyltransferase 6 208 3.7E-78 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like SII_RS06340 10c195d8d9585e508005ef12c8a1040a 209 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 3 209 48.66 T 22-04-2016 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183|UniPathway: UPA00574 SII_RS06340 10c195d8d9585e508005ef12c8a1040a 209 Gene3D G3DSA:3.40.50.2020 5 209 1.6E-86 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like SII_RS06340 10c195d8d9585e508005ef12c8a1040a 209 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 4 209 6.4E-91 T 22-04-2016 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183|UniPathway: UPA00574 SII_RS06340 10c195d8d9585e508005ef12c8a1040a 209 SUPERFAMILY SSF53271 5 207 6.16E-73 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like SII_RS06340 10c195d8d9585e508005ef12c8a1040a 209 PANTHER PTHR10285 9 198 3.9E-104 T 22-04-2016 SII_RS06915 ea4d050104f2906b715302b549072094 291 ProSitePatterns PS00211 ABC transporters family signature. 129 143 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SII_RS06915 ea4d050104f2906b715302b549072094 291 Pfam PF00005 ABC transporter 19 157 7.6E-27 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SII_RS06915 ea4d050104f2906b715302b549072094 291 SUPERFAMILY SSF52540 3 223 1.81E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS06915 ea4d050104f2906b715302b549072094 291 Gene3D G3DSA:3.40.50.300 2 222 6.2E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS06915 ea4d050104f2906b715302b549072094 291 PANTHER PTHR24220:SF165 5 222 8.3E-72 T 22-04-2016 SII_RS06915 ea4d050104f2906b715302b549072094 291 PANTHER PTHR24220 5 222 8.3E-72 T 22-04-2016 SII_RS06915 ea4d050104f2906b715302b549072094 291 SMART SM00382 28 205 1.1E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain SII_RS09200 b27e3c2904247f7a2f05b3c7bdf78c40 83 Gene3D G3DSA:1.10.10.10 32 82 8.5E-8 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SII_RS09200 b27e3c2904247f7a2f05b3c7bdf78c40 83 SUPERFAMILY SSF46955 33 81 2.81E-8 T 22-04-2016 IPR009061 Putative DNA-binding domain SII_RS09200 b27e3c2904247f7a2f05b3c7bdf78c40 83 Pfam PF13411 MerR HTH family regulatory protein 36 78 5.1E-6 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SII_RS00485 79d7fc678f4508ab74339674d1eba814 281 PANTHER PTHR30514 1 263 3.7E-63 T 22-04-2016 SII_RS00485 79d7fc678f4508ab74339674d1eba814 281 PANTHER PTHR30514:SF1 1 263 3.7E-63 T 22-04-2016 SII_RS00485 79d7fc678f4508ab74339674d1eba814 281 Pfam PF01418 Helix-turn-helix domain, rpiR family 7 79 2.5E-16 T 22-04-2016 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 SII_RS00485 79d7fc678f4508ab74339674d1eba814 281 Gene3D G3DSA:1.10.10.10 2 80 3.4E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SII_RS00485 79d7fc678f4508ab74339674d1eba814 281 Pfam PF01380 SIS domain 123 218 4.4E-13 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 SII_RS00485 79d7fc678f4508ab74339674d1eba814 281 SUPERFAMILY SSF53697 93 255 1.45E-29 T 22-04-2016 SII_RS00485 79d7fc678f4508ab74339674d1eba814 281 SUPERFAMILY SSF46689 6 80 3.05E-16 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SII_RS00485 79d7fc678f4508ab74339674d1eba814 281 Gene3D G3DSA:3.40.50.10490 94 265 5.8E-31 T 22-04-2016 SII_RS00075 62973d432c9ae8a0e0d33e25bd6dd6b9 157 SUPERFAMILY SSF88946 3 90 5.49E-7 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SII_RS00075 62973d432c9ae8a0e0d33e25bd6dd6b9 157 Gene3D G3DSA:1.10.1740.10 3 91 2.5E-5 T 22-04-2016 SII_RS08655 62973d432c9ae8a0e0d33e25bd6dd6b9 157 SUPERFAMILY SSF88946 3 90 5.49E-7 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SII_RS08655 62973d432c9ae8a0e0d33e25bd6dd6b9 157 Gene3D G3DSA:1.10.1740.10 3 91 2.5E-5 T 22-04-2016 SII_RS05745 0f58e311392b2d4da2f90a0f956c5866 269 PANTHER PTHR10000:SF16 1 269 7.0E-102 T 22-04-2016 SII_RS05745 0f58e311392b2d4da2f90a0f956c5866 269 ProSitePatterns PS01228 Hypothetical cof family signature 1. 5 16 - T 22-04-2016 IPR000150 Cof protein GO:0016787 SII_RS05745 0f58e311392b2d4da2f90a0f956c5866 269 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 263 1.0E-65 T 22-04-2016 IPR000150 Cof protein GO:0016787 SII_RS05745 0f58e311392b2d4da2f90a0f956c5866 269 PANTHER PTHR10000 1 269 7.0E-102 T 22-04-2016 SII_RS05745 0f58e311392b2d4da2f90a0f956c5866 269 SUPERFAMILY SSF56784 1 268 1.73E-80 T 22-04-2016 IPR023214 HAD-like domain SII_RS05745 0f58e311392b2d4da2f90a0f956c5866 269 Gene3D G3DSA:3.40.50.1000 183 268 7.7E-60 T 22-04-2016 IPR023214 HAD-like domain SII_RS05745 0f58e311392b2d4da2f90a0f956c5866 269 Gene3D G3DSA:3.40.50.1000 1 76 7.7E-60 T 22-04-2016 IPR023214 HAD-like domain SII_RS05745 0f58e311392b2d4da2f90a0f956c5866 269 Gene3D G3DSA:3.30.1240.10 87 182 8.0E-45 T 22-04-2016 SII_RS05745 0f58e311392b2d4da2f90a0f956c5866 269 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 236 3.5E-28 T 22-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 SII_RS05745 0f58e311392b2d4da2f90a0f956c5866 269 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 263 2.8E-70 T 22-04-2016 IPR023214 HAD-like domain SII_RS02475 0e57519a59ae11de658fe1bdf5b44ac7 563 SUPERFAMILY SSF53738 302 452 2.47E-30 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SII_RS02475 0e57519a59ae11de658fe1bdf5b44ac7 563 SUPERFAMILY SSF55957 466 541 2.09E-14 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SII_RS02475 0e57519a59ae11de658fe1bdf5b44ac7 563 Gene3D G3DSA:3.40.120.10 305 452 2.4E-35 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SII_RS02475 0e57519a59ae11de658fe1bdf5b44ac7 563 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 140 149 - T 22-04-2016 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SII_RS02475 0e57519a59ae11de658fe1bdf5b44ac7 563 PANTHER PTHR22573:SF54 19 563 5.1E-206 T 22-04-2016 SII_RS02475 0e57519a59ae11de658fe1bdf5b44ac7 563 SUPERFAMILY SSF53738 209 313 1.81E-20 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SII_RS02475 0e57519a59ae11de658fe1bdf5b44ac7 563 Gene3D G3DSA:3.40.120.10 21 216 1.1E-60 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SII_RS02475 0e57519a59ae11de658fe1bdf5b44ac7 563 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 497 536 1.1E-8 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SII_RS02475 0e57519a59ae11de658fe1bdf5b44ac7 563 Gene3D G3DSA:3.30.310.50 478 560 2.8E-23 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SII_RS02475 0e57519a59ae11de658fe1bdf5b44ac7 563 SUPERFAMILY SSF53738 31 233 5.55E-46 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SII_RS02475 0e57519a59ae11de658fe1bdf5b44ac7 563 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 139 153 5.6E-6 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SII_RS02475 0e57519a59ae11de658fe1bdf5b44ac7 563 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 227 246 5.6E-6 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SII_RS02475 0e57519a59ae11de658fe1bdf5b44ac7 563 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 294 309 5.6E-6 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SII_RS02475 0e57519a59ae11de658fe1bdf5b44ac7 563 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 210 309 2.3E-20 T 22-04-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SII_RS02475 0e57519a59ae11de658fe1bdf5b44ac7 563 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 322 449 5.2E-21 T 22-04-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SII_RS02475 0e57519a59ae11de658fe1bdf5b44ac7 563 Gene3D G3DSA:3.40.120.10 228 304 2.0E-19 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SII_RS02475 0e57519a59ae11de658fe1bdf5b44ac7 563 PANTHER PTHR22573 19 563 5.1E-206 T 22-04-2016 SII_RS02475 0e57519a59ae11de658fe1bdf5b44ac7 563 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 42 180 1.2E-42 T 22-04-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SII_RS08890 adc9798bb3c45045bd24af6b1f63a649 286 PANTHER PTHR10366:SF329 3 223 2.0E-34 T 22-04-2016 SII_RS08890 adc9798bb3c45045bd24af6b1f63a649 286 Pfam PF01370 NAD dependent epimerase/dehydratase family 5 200 1.2E-17 T 22-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 SII_RS08890 adc9798bb3c45045bd24af6b1f63a649 286 SUPERFAMILY SSF51735 1 234 3.61E-39 T 22-04-2016 IPR016040 NAD(P)-binding domain SII_RS08890 adc9798bb3c45045bd24af6b1f63a649 286 PANTHER PTHR10366 3 223 2.0E-34 T 22-04-2016 SII_RS08890 adc9798bb3c45045bd24af6b1f63a649 286 Gene3D G3DSA:3.40.50.720 1 223 8.0E-36 T 22-04-2016 IPR016040 NAD(P)-binding domain SII_RS05250 1366d93bd6dac6f9019e727d63a6d13c 225 Gene3D G3DSA:3.20.20.70 2 224 6.2E-68 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SII_RS05250 1366d93bd6dac6f9019e727d63a6d13c 225 PANTHER PTHR21089 1 225 3.0E-76 T 22-04-2016 SII_RS05250 1366d93bd6dac6f9019e727d63a6d13c 225 PANTHER PTHR21089:SF5 1 225 3.0E-76 T 22-04-2016 SII_RS05250 1366d93bd6dac6f9019e727d63a6d13c 225 SUPERFAMILY SSF51569 1 223 7.69E-62 T 22-04-2016 SII_RS05250 1366d93bd6dac6f9019e727d63a6d13c 225 Hamap MF_00214 3-dehydroquinate dehydratase [aroD]. 2 222 36.331 T 22-04-2016 IPR001381 3-dehydroquinate dehydratase type I GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 SII_RS05250 1366d93bd6dac6f9019e727d63a6d13c 225 Pfam PF01487 Type I 3-dehydroquinase 5 218 5.7E-51 T 22-04-2016 IPR001381 3-dehydroquinate dehydratase type I GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 SII_RS05250 1366d93bd6dac6f9019e727d63a6d13c 225 TIGRFAM TIGR01093 aroD: 3-dehydroquinate dehydratase, type I 3 218 3.0E-47 T 22-04-2016 IPR001381 3-dehydroquinate dehydratase type I GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 SII_RS03890 1a127ff334f0244bf17c7e2289adb567 762 TIGRFAM TIGR01167 LPXTG_anchor: LPXTG cell wall anchor domain 728 758 2.8E-5 T 22-04-2016 IPR019931 LPXTG cell wall anchor domain SII_RS03890 1a127ff334f0244bf17c7e2289adb567 762 SUPERFAMILY SSF55797 321 447 1.44E-8 T 22-04-2016 IPR014044 CAP domain SII_RS03890 1a127ff334f0244bf17c7e2289adb567 762 Pfam PF00746 Gram positive anchor 720 756 6.1E-5 T 22-04-2016 IPR019948 Gram-positive anchor SII_RS03890 1a127ff334f0244bf17c7e2289adb567 762 Pfam PF00188 Cysteine-rich secretory protein family 324 450 2.4E-11 T 22-04-2016 IPR014044 CAP domain SII_RS07260 ebc9552a10eb40d269606680ec346eee 144 SUPERFAMILY SSF46785 12 142 1.98E-28 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SII_RS07260 ebc9552a10eb40d269606680ec346eee 144 Pfam PF01047 MarR family 33 91 1.2E-10 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SII_RS07260 ebc9552a10eb40d269606680ec346eee 144 PANTHER PTHR33164 32 143 3.4E-18 T 22-04-2016 SII_RS07260 ebc9552a10eb40d269606680ec346eee 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 86 102 2.0E-11 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SII_RS07260 ebc9552a10eb40d269606680ec346eee 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 116 136 2.0E-11 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SII_RS07260 ebc9552a10eb40d269606680ec346eee 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 50 66 2.0E-11 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SII_RS07260 ebc9552a10eb40d269606680ec346eee 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 67 82 2.0E-11 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SII_RS07260 ebc9552a10eb40d269606680ec346eee 144 SMART SM00347 26 126 3.1E-20 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SII_RS07260 ebc9552a10eb40d269606680ec346eee 144 Gene3D G3DSA:1.10.10.10 3 142 1.5E-35 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SII_RS07355 cff478bdfb38b0efd5d5670430abbcc3 170 Gene3D G3DSA:3.40.50.850 1 168 1.6E-42 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 SII_RS07355 cff478bdfb38b0efd5d5670430abbcc3 170 PANTHER PTHR11080:SF13 1 169 3.6E-39 T 22-04-2016 SII_RS07355 cff478bdfb38b0efd5d5670430abbcc3 170 Pfam PF00857 Isochorismatase family 3 162 1.1E-29 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 SII_RS07355 cff478bdfb38b0efd5d5670430abbcc3 170 PANTHER PTHR11080 1 169 3.6E-39 T 22-04-2016 SII_RS07355 cff478bdfb38b0efd5d5670430abbcc3 170 SUPERFAMILY SSF52499 2 159 2.22E-42 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 SII_RS04550 7b50272e3959ac700db20c15f0b60309 247 SUPERFAMILY SSF54637 1 146 1.65E-32 T 22-04-2016 IPR029069 HotDog domain SII_RS04550 7b50272e3959ac700db20c15f0b60309 247 Gene3D G3DSA:3.10.129.10 149 239 1.0E-24 T 22-04-2016 IPR029069 HotDog domain SII_RS04550 7b50272e3959ac700db20c15f0b60309 247 Gene3D G3DSA:3.10.129.10 2 144 9.7E-33 T 22-04-2016 IPR029069 HotDog domain SII_RS04550 7b50272e3959ac700db20c15f0b60309 247 PANTHER PTHR31727 50 240 3.1E-44 T 22-04-2016 SII_RS04550 7b50272e3959ac700db20c15f0b60309 247 SUPERFAMILY SSF54637 150 239 2.46E-23 T 22-04-2016 IPR029069 HotDog domain SII_RS04550 7b50272e3959ac700db20c15f0b60309 247 Pfam PF01643 Acyl-ACP thioesterase 2 240 4.1E-82 T 22-04-2016 IPR002864 Acyl-ACP thioesterase GO:0006633|GO:0016790 SII_RS01345 f6e065f2a052d85aa3a6391231a1c6de 444 Pfam PF10117 McrBC 5-methylcytosine restriction system component 66 375 4.5E-70 T 22-04-2016 IPR019292 5-methylcytosine restriction system component SII_RS01345 f6e065f2a052d85aa3a6391231a1c6de 444 PANTHER PTHR38733:SF1 2 441 3.6E-45 T 22-04-2016 SII_RS01345 f6e065f2a052d85aa3a6391231a1c6de 444 PANTHER PTHR38733 2 441 3.6E-45 T 22-04-2016 SII_RS00565 8e66f4b938afbd81224e018001052ffa 203 PANTHER PTHR18901 3 179 8.0E-28 T 22-04-2016 SII_RS00565 8e66f4b938afbd81224e018001052ffa 203 Gene3D G3DSA:3.40.50.1000 2 14 3.2E-26 T 22-04-2016 IPR023214 HAD-like domain SII_RS00565 8e66f4b938afbd81224e018001052ffa 203 Gene3D G3DSA:3.40.50.1000 84 182 3.2E-26 T 22-04-2016 IPR023214 HAD-like domain SII_RS00565 8e66f4b938afbd81224e018001052ffa 203 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 58 175 2.2E-8 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SII_RS00565 8e66f4b938afbd81224e018001052ffa 203 PANTHER PTHR18901:SF14 3 179 8.0E-28 T 22-04-2016 SII_RS00565 8e66f4b938afbd81224e018001052ffa 203 Pfam PF13419 Haloacid dehalogenase-like hydrolase 6 179 5.2E-29 T 22-04-2016 IPR023214 HAD-like domain SII_RS00565 8e66f4b938afbd81224e018001052ffa 203 SUPERFAMILY SSF56784 3 202 8.14E-38 T 22-04-2016 IPR023214 HAD-like domain SII_RS07825 ba49b69ee765c14a2ff2cd2611d770bf 166 SUPERFAMILY SSF88723 1 128 8.13E-7 T 22-04-2016 IPR029060 PIN domain-like SII_RS07825 ba49b69ee765c14a2ff2cd2611d770bf 166 Pfam PF14367 Domain of unknown function (DUF4411) 2 164 2.4E-32 T 22-04-2016 IPR016541 Uncharacterised conserved protein UCP008505 SII_RS07825 ba49b69ee765c14a2ff2cd2611d770bf 166 PIRSF PIRSF008505 1 166 8.0E-47 T 22-04-2016 IPR016541 Uncharacterised conserved protein UCP008505 SII_RS04295 1a9fd3c015991eddd42c96f68d1bc88c 225 Pfam PF16264 SatD family (SatD) 3 212 3.0E-94 T 22-04-2016 IPR032580 SatD family SII_RS02060 e554cc8148e8e3d32762603231bed681 277 Gene3D G3DSA:3.40.50.10170 3 149 2.7E-46 T 22-04-2016 SII_RS02060 e554cc8148e8e3d32762603231bed681 277 PANTHER PTHR33434 1 275 2.7E-122 T 22-04-2016 SII_RS02060 e554cc8148e8e3d32762603231bed681 277 SUPERFAMILY SSF82549 1 276 7.59E-81 T 22-04-2016 SII_RS02060 e554cc8148e8e3d32762603231bed681 277 TIGRFAM TIGR00762 DegV: EDD domain protein, DegV family 4 274 9.3E-89 T 22-04-2016 IPR003797 DegV SII_RS02060 e554cc8148e8e3d32762603231bed681 277 Pfam PF02645 Uncharacterised protein, DegV family COG1307 3 275 3.5E-87 T 22-04-2016 IPR003797 DegV SII_RS02060 e554cc8148e8e3d32762603231bed681 277 PANTHER PTHR33434:SF1 1 275 2.7E-122 T 22-04-2016 SII_RS02060 e554cc8148e8e3d32762603231bed681 277 Gene3D G3DSA:3.30.1180.10 153 275 5.5E-39 T 22-04-2016 SII_RS07595 1af9c99a268fffae9c89dcff033e3e58 498 Gene3D G3DSA:1.10.3720.10 275 487 4.6E-13 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SII_RS07595 1af9c99a268fffae9c89dcff033e3e58 498 SUPERFAMILY SSF161098 277 474 1.44E-15 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SII_RS07595 1af9c99a268fffae9c89dcff033e3e58 498 PANTHER PTHR30465 261 492 3.6E-91 T 22-04-2016 SII_RS07595 1af9c99a268fffae9c89dcff033e3e58 498 PANTHER PTHR30465 62 78 3.6E-91 T 22-04-2016 SII_RS07595 1af9c99a268fffae9c89dcff033e3e58 498 PANTHER PTHR30465 145 170 3.6E-91 T 22-04-2016 SII_RS07595 1af9c99a268fffae9c89dcff033e3e58 498 PANTHER PTHR30465 1 44 3.6E-91 T 22-04-2016 SII_RS07595 1af9c99a268fffae9c89dcff033e3e58 498 PANTHER PTHR30465:SF0 261 492 3.6E-91 T 22-04-2016 SII_RS07595 1af9c99a268fffae9c89dcff033e3e58 498 PANTHER PTHR30465:SF0 62 78 3.6E-91 T 22-04-2016 SII_RS07595 1af9c99a268fffae9c89dcff033e3e58 498 PANTHER PTHR30465:SF0 145 170 3.6E-91 T 22-04-2016 SII_RS07595 1af9c99a268fffae9c89dcff033e3e58 498 PANTHER PTHR30465:SF0 1 44 3.6E-91 T 22-04-2016 SII_RS07595 1af9c99a268fffae9c89dcff033e3e58 498 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 298 491 3.7E-36 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SII_RS09495 c9518438e588c437a6774ec654605365 179 SUPERFAMILY SSF52218 1 176 1.45E-36 T 22-04-2016 IPR029039 Flavoprotein-like domain SII_RS09495 c9518438e588c437a6774ec654605365 179 PANTHER PTHR10204 1 177 7.8E-48 T 22-04-2016 SII_RS09495 c9518438e588c437a6774ec654605365 179 PANTHER PTHR10204:SF0 1 177 7.8E-48 T 22-04-2016 SII_RS09495 c9518438e588c437a6774ec654605365 179 Gene3D G3DSA:3.40.50.360 1 174 6.3E-39 T 22-04-2016 IPR029039 Flavoprotein-like domain SII_RS09495 c9518438e588c437a6774ec654605365 179 Pfam PF02525 Flavodoxin-like fold 24 170 4.3E-32 T 22-04-2016 IPR003680 Flavodoxin-like fold SII_RS06215 62d16f001fc75a5ef87c2d2085455c66 86 Pfam PF03083 Sugar efflux transporter for intercellular exchange 8 82 1.8E-8 T 22-04-2016 IPR004316 SWEET sugar transporter GO:0016021 SII_RS02255 7834e160411eafaff9911ad438748cde 554 SUPERFAMILY SSF52518 3 175 2.81E-48 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SII_RS02255 7834e160411eafaff9911ad438748cde 554 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 425 444 - T 22-04-2016 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 SII_RS02255 7834e160411eafaff9911ad438748cde 554 SUPERFAMILY SSF52467 187 350 9.82E-35 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain SII_RS02255 7834e160411eafaff9911ad438748cde 554 Gene3D G3DSA:3.40.50.970 363 541 2.0E-60 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SII_RS02255 7834e160411eafaff9911ad438748cde 554 SUPERFAMILY SSF52518 364 540 1.26E-57 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SII_RS02255 7834e160411eafaff9911ad438748cde 554 Gene3D G3DSA:3.40.50.970 6 176 6.2E-59 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold SII_RS02255 7834e160411eafaff9911ad438748cde 554 PANTHER PTHR18968:SF129 6 552 7.0E-268 T 22-04-2016 SII_RS02255 7834e160411eafaff9911ad438748cde 554 TIGRFAM TIGR02418 acolac_catab: acetolactate synthase, catabolic 6 545 5.7E-273 T 22-04-2016 IPR012782 Acetolactate synthase, catabolic GO:0000287|GO:0003984|GO:0030976|GO:0034077 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00626 SII_RS02255 7834e160411eafaff9911ad438748cde 554 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 6 170 1.1E-49 T 22-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 SII_RS02255 7834e160411eafaff9911ad438748cde 554 Gene3D G3DSA:3.40.50.1220 188 347 3.5E-35 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain SII_RS02255 7834e160411eafaff9911ad438748cde 554 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 388 534 3.4E-43 T 22-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 SII_RS02255 7834e160411eafaff9911ad438748cde 554 PANTHER PTHR18968 6 552 7.0E-268 T 22-04-2016 SII_RS02255 7834e160411eafaff9911ad438748cde 554 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 191 326 1.5E-27 T 22-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 SII_RS04960 8a3107a2c944de669ad78aaf7b93ce41 309 SUPERFAMILY SSF53448 1 224 8.44E-43 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SII_RS04960 8a3107a2c944de669ad78aaf7b93ce41 309 Gene3D G3DSA:3.90.550.10 1 150 1.2E-30 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SII_RS04960 8a3107a2c944de669ad78aaf7b93ce41 309 PANTHER PTHR10859:SF81 1 309 2.2E-157 T 22-04-2016 SII_RS04960 8a3107a2c944de669ad78aaf7b93ce41 309 PANTHER PTHR10859 1 309 2.2E-157 T 22-04-2016 SII_RS04960 8a3107a2c944de669ad78aaf7b93ce41 309 Pfam PF00535 Glycosyl transferase family 2 4 168 1.7E-33 T 22-04-2016 IPR001173 Glycosyltransferase 2-like SII_RS04920 89b6c945dfcd8f3e14ceb73a38255b68 995 SUPERFAMILY SSF53448 4 222 2.81E-42 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SII_RS04920 89b6c945dfcd8f3e14ceb73a38255b68 995 SUPERFAMILY SSF53756 665 979 7.53E-22 T 22-04-2016 SII_RS04920 89b6c945dfcd8f3e14ceb73a38255b68 995 PANTHER PTHR22916 4 486 1.6E-28 T 22-04-2016 SII_RS04920 89b6c945dfcd8f3e14ceb73a38255b68 995 Pfam PF00535 Glycosyl transferase family 2 6 121 3.7E-24 T 22-04-2016 IPR001173 Glycosyltransferase 2-like SII_RS04920 89b6c945dfcd8f3e14ceb73a38255b68 995 Gene3D G3DSA:3.90.550.10 4 227 1.2E-39 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SII_RS04920 89b6c945dfcd8f3e14ceb73a38255b68 995 Pfam PF05045 Rhamnan synthesis protein F 405 636 1.4E-56 T 22-04-2016 IPR007739 Rhamnan synthesis F SII_RS04920 89b6c945dfcd8f3e14ceb73a38255b68 995 Gene3D G3DSA:3.40.50.2000 820 967 6.0E-4 T 22-04-2016 SII_RS04920 89b6c945dfcd8f3e14ceb73a38255b68 995 Pfam PF13692 Glycosyl transferases group 1 823 953 3.6E-15 T 22-04-2016 SII_RS00200 11c8b1ebead767d0334be5c225f1be2d 322 Gene3D G3DSA:3.40.50.2020 3 161 2.2E-75 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like SII_RS00200 11c8b1ebead767d0334be5c225f1be2d 322 SMART SM01400 6 122 1.3E-80 T 22-04-2016 SII_RS00200 11c8b1ebead767d0334be5c225f1be2d 322 PANTHER PTHR10210:SF41 1 322 1.6E-191 T 22-04-2016 SII_RS00200 11c8b1ebead767d0334be5c225f1be2d 322 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 6 122 3.6E-51 T 22-04-2016 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 SII_RS00200 11c8b1ebead767d0334be5c225f1be2d 322 Gene3D G3DSA:3.40.50.2020 162 289 4.2E-51 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like SII_RS00200 11c8b1ebead767d0334be5c225f1be2d 322 SUPERFAMILY SSF53271 71 308 5.7E-62 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like SII_RS00200 11c8b1ebead767d0334be5c225f1be2d 322 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 130 145 - T 22-04-2016 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: REACT_474|UniPathway: UPA00087 SII_RS00200 11c8b1ebead767d0334be5c225f1be2d 322 Pfam PF14572 Phosphoribosyl synthetase-associated domain 208 316 5.3E-23 T 22-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 SII_RS00200 11c8b1ebead767d0334be5c225f1be2d 322 Hamap MF_00583_B Ribose-phosphate pyrophosphokinase [prs]. 6 317 50.49 T 22-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 SII_RS00200 11c8b1ebead767d0334be5c225f1be2d 322 PANTHER PTHR10210 1 322 1.6E-191 T 22-04-2016 SII_RS00200 11c8b1ebead767d0334be5c225f1be2d 322 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 7 317 3.0E-122 T 22-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 SII_RS06570 eaa723ae7261f5cabc929005d5cf5607 309 TIGRFAM TIGR01136 cysKM: cysteine synthase 8 305 8.4E-123 T 22-04-2016 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 SII_RS06570 eaa723ae7261f5cabc929005d5cf5607 309 PANTHER PTHR10314 3 306 7.3E-140 T 22-04-2016 SII_RS06570 eaa723ae7261f5cabc929005d5cf5607 309 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 8 293 1.1E-66 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme SII_RS06570 eaa723ae7261f5cabc929005d5cf5607 309 Gene3D G3DSA:3.40.50.1100 150 306 9.8E-67 T 22-04-2016 SII_RS06570 eaa723ae7261f5cabc929005d5cf5607 309 Gene3D G3DSA:3.40.50.1100 2 43 9.8E-67 T 22-04-2016 SII_RS06570 eaa723ae7261f5cabc929005d5cf5607 309 PANTHER PTHR10314:SF110 3 306 7.3E-140 T 22-04-2016 SII_RS06570 eaa723ae7261f5cabc929005d5cf5607 309 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 34 52 - T 22-04-2016 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 SII_RS06570 eaa723ae7261f5cabc929005d5cf5607 309 Gene3D G3DSA:3.40.50.1100 44 141 3.0E-43 T 22-04-2016 SII_RS06570 eaa723ae7261f5cabc929005d5cf5607 309 TIGRFAM TIGR01139 cysK: cysteine synthase A 8 305 1.1E-129 T 22-04-2016 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 SII_RS06570 eaa723ae7261f5cabc929005d5cf5607 309 SUPERFAMILY SSF53686 3 305 1.83E-97 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme SII_RS05135 4b16c5d54d1727fd80a50ffdc223dd84 710 SUPERFAMILY SSF54001 606 700 5.23E-7 T 22-04-2016 SII_RS05135 4b16c5d54d1727fd80a50ffdc223dd84 710 Gene3D G3DSA:3.90.1720.10 605 688 3.8E-7 T 22-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- SII_RS05225 6a58f101d3bcd3cbd285013cbb21d7a8 126 Pfam PF07843 Protein of unknown function (DUF1634) 17 118 1.9E-20 T 22-04-2016 IPR012861 Protein of unknown function DUF1634 SII_RS06870 7bddbb0197195c495e9539124b199d9b 280 PANTHER PTHR30622 2 273 5.1E-137 T 22-04-2016 SII_RS06870 7bddbb0197195c495e9539124b199d9b 280 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 4 274 16.73 T 22-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 SII_RS06870 7bddbb0197195c495e9539124b199d9b 280 PANTHER PTHR30622:SF5 2 273 5.1E-137 T 22-04-2016 SII_RS06870 7bddbb0197195c495e9539124b199d9b 280 Pfam PF02673 Bacitracin resistance protein BacA 10 269 2.4E-75 T 22-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 SII_RS05245 c64cb8ade8d961bae9c386758e8309fd 284 SUPERFAMILY SSF53223 2 106 1.04E-35 T 22-04-2016 SII_RS05245 c64cb8ade8d961bae9c386758e8309fd 284 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 12 94 4.5E-29 T 22-04-2016 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 SII_RS05245 c64cb8ade8d961bae9c386758e8309fd 284 Gene3D G3DSA:3.40.50.720 111 283 4.5E-46 T 22-04-2016 IPR016040 NAD(P)-binding domain SII_RS05245 c64cb8ade8d961bae9c386758e8309fd 284 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 9 281 4.2E-71 T 22-04-2016 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 SII_RS05245 c64cb8ade8d961bae9c386758e8309fd 284 Gene3D G3DSA:3.40.192.10 2 110 1.2E-41 T 22-04-2016 SII_RS05245 c64cb8ade8d961bae9c386758e8309fd 284 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 7 281 33.902 T 22-04-2016 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 SII_RS05245 c64cb8ade8d961bae9c386758e8309fd 284 SUPERFAMILY SSF51735 107 282 9.06E-32 T 22-04-2016 IPR016040 NAD(P)-binding domain SII_RS05245 c64cb8ade8d961bae9c386758e8309fd 284 PANTHER PTHR21089 1 283 1.1E-92 T 22-04-2016 SII_RS06525 e46bf0ce210c8eb61a44028454e48c97 360 Gene3D G3DSA:3.20.20.70 96 330 7.5E-17 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SII_RS06525 e46bf0ce210c8eb61a44028454e48c97 360 PIRSF PIRSF006004 1 360 5.8E-135 T 22-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SII_RS06525 e46bf0ce210c8eb61a44028454e48c97 360 SUPERFAMILY SSF102114 97 308 4.05E-15 T 22-04-2016 SII_RS06525 e46bf0ce210c8eb61a44028454e48c97 360 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 1 355 1.7E-135 T 22-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SII_RS06525 e46bf0ce210c8eb61a44028454e48c97 360 PANTHER PTHR30544 2 355 3.8E-171 T 22-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SII_RS06525 e46bf0ce210c8eb61a44028454e48c97 360 Pfam PF04055 Radical SAM superfamily 105 275 7.5E-17 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 SII_RS06525 e46bf0ce210c8eb61a44028454e48c97 360 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 2 349 70.084 T 22-04-2016 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SII_RS06525 e46bf0ce210c8eb61a44028454e48c97 360 Pfam PF13394 4Fe-4S single cluster domain 110 204 5.3E-8 T 22-04-2016 SII_RS06525 e46bf0ce210c8eb61a44028454e48c97 360 PANTHER PTHR30544:SF5 2 355 3.8E-171 T 22-04-2016 SII_RS07725 bc1ab3f7913da47d7e0c5962f6671c11 102 SMART SM01323 2 91 2.1E-7 T 22-04-2016 IPR003849 Preprotein translocase YajC SII_RS07725 bc1ab3f7913da47d7e0c5962f6671c11 102 PANTHER PTHR33909:SF1 7 93 1.1E-15 T 22-04-2016 SII_RS07725 bc1ab3f7913da47d7e0c5962f6671c11 102 PANTHER PTHR33909 7 93 1.1E-15 T 22-04-2016 SII_RS07725 bc1ab3f7913da47d7e0c5962f6671c11 102 Pfam PF02699 Preprotein translocase subunit 25 88 1.2E-14 T 22-04-2016 IPR003849 Preprotein translocase YajC SII_RS07890 3f31e53fa789e8f2a15f78a317ae5299 348 PANTHER PTHR11228 8 121 6.8E-14 T 22-04-2016 SII_RS07890 3f31e53fa789e8f2a15f78a317ae5299 348 Gene3D G3DSA:3.20.20.70 8 130 5.1E-16 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SII_RS07890 3f31e53fa789e8f2a15f78a317ae5299 348 PANTHER PTHR11228:SF31 8 121 6.8E-14 T 22-04-2016 SII_RS07890 3f31e53fa789e8f2a15f78a317ae5299 348 SUPERFAMILY SSF102114 11 239 4.51E-17 T 22-04-2016 SII_RS03080 53baf0503822fe90a1e7078f2187a899 607 SMART SM00838 407 495 6.7E-5 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain SII_RS03080 53baf0503822fe90a1e7078f2187a899 607 Pfam PF00009 Elongation factor Tu GTP binding domain 13 190 9.7E-52 T 22-04-2016 SII_RS03080 53baf0503822fe90a1e7078f2187a899 607 TIGRFAM TIGR01393 lepA: elongation factor 4 12 605 0.0 T 22-04-2016 IPR006297 Elongation factor 4 GO:0005525 SII_RS03080 53baf0503822fe90a1e7078f2187a899 607 SUPERFAMILY SSF52540 6 208 7.34E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS03080 53baf0503822fe90a1e7078f2187a899 607 SUPERFAMILY SSF54980 408 503 1.34E-26 T 22-04-2016 IPR009022 Elongation factor G, III-V domain SII_RS03080 53baf0503822fe90a1e7078f2187a899 607 SUPERFAMILY SSF50447 175 297 1.52E-29 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain SII_RS03080 53baf0503822fe90a1e7078f2187a899 607 PANTHER PTHR23115 406 605 1.1E-291 T 22-04-2016 SII_RS03080 53baf0503822fe90a1e7078f2187a899 607 PANTHER PTHR23115 1 382 1.1E-291 T 22-04-2016 SII_RS03080 53baf0503822fe90a1e7078f2187a899 607 Gene3D G3DSA:3.40.50.300 6 202 1.6E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS03080 53baf0503822fe90a1e7078f2187a899 607 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site SII_RS03080 53baf0503822fe90a1e7078f2187a899 607 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 16 183 8.2E-19 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 SII_RS03080 53baf0503822fe90a1e7078f2187a899 607 PANTHER PTHR23115:SF175 406 605 1.1E-291 T 22-04-2016 SII_RS03080 53baf0503822fe90a1e7078f2187a899 607 PANTHER PTHR23115:SF175 1 382 1.1E-291 T 22-04-2016 SII_RS03080 53baf0503822fe90a1e7078f2187a899 607 Pfam PF03144 Elongation factor Tu domain 2 214 284 3.0E-8 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 SII_RS03080 53baf0503822fe90a1e7078f2187a899 607 Pfam PF00679 Elongation factor G C-terminus 408 495 3.7E-25 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain SII_RS03080 53baf0503822fe90a1e7078f2187a899 607 Gene3D G3DSA:2.40.30.10 203 298 7.0E-23 T 22-04-2016 SII_RS03080 53baf0503822fe90a1e7078f2187a899 607 SUPERFAMILY SSF54980 301 379 1.15E-19 T 22-04-2016 IPR009022 Elongation factor G, III-V domain SII_RS03080 53baf0503822fe90a1e7078f2187a899 607 PRINTS PR00315 GTP-binding elongation factor signature 58 66 3.8E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SII_RS03080 53baf0503822fe90a1e7078f2187a899 607 PRINTS PR00315 GTP-binding elongation factor signature 83 93 3.8E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SII_RS03080 53baf0503822fe90a1e7078f2187a899 607 PRINTS PR00315 GTP-binding elongation factor signature 99 110 3.8E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SII_RS03080 53baf0503822fe90a1e7078f2187a899 607 PRINTS PR00315 GTP-binding elongation factor signature 135 144 3.8E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SII_RS03080 53baf0503822fe90a1e7078f2187a899 607 PRINTS PR00315 GTP-binding elongation factor signature 15 28 3.8E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SII_RS03080 53baf0503822fe90a1e7078f2187a899 607 Gene3D G3DSA:3.30.70.240 410 499 8.6E-25 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain SII_RS03080 53baf0503822fe90a1e7078f2187a899 607 Pfam PF06421 GTP-binding protein LepA C-terminus 497 603 2.7E-50 T 22-04-2016 IPR013842 GTP-binding protein LepA, C-terminal SII_RS03080 53baf0503822fe90a1e7078f2187a899 607 Gene3D G3DSA:3.30.70.870 301 378 9.2E-28 T 22-04-2016 SII_RS03080 53baf0503822fe90a1e7078f2187a899 607 Hamap MF_00071 Elongation factor 4 [lepA]. 1 607 306.915 T 22-04-2016 IPR006297 Elongation factor 4 GO:0005525 SII_RS08690 918764a35c6175b4dc30bc6f474ab8e1 435 ProSitePatterns PS00755 Protein secY signature 1. 69 88 - T 22-04-2016 IPR030659 SecY conserved site SII_RS08690 918764a35c6175b4dc30bc6f474ab8e1 435 PANTHER PTHR10906:SF2 6 431 7.4E-169 T 22-04-2016 SII_RS08690 918764a35c6175b4dc30bc6f474ab8e1 435 Hamap MF_01465 Protein translocase subunit SecY [secY]. 6 431 26.292 T 22-04-2016 IPR026593 Protein translocase subunit SecY SII_RS08690 918764a35c6175b4dc30bc6f474ab8e1 435 PANTHER PTHR10906 6 431 7.4E-169 T 22-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 SII_RS08690 918764a35c6175b4dc30bc6f474ab8e1 435 SUPERFAMILY SSF103491 5 422 1.96E-118 T 22-04-2016 IPR023201 SecY subunit domain SII_RS08690 918764a35c6175b4dc30bc6f474ab8e1 435 PRINTS PR00303 Preprotein translocase SecY subunit signature 68 88 3.6E-88 T 22-04-2016 SII_RS08690 918764a35c6175b4dc30bc6f474ab8e1 435 PRINTS PR00303 Preprotein translocase SecY subunit signature 311 333 3.6E-88 T 22-04-2016 SII_RS08690 918764a35c6175b4dc30bc6f474ab8e1 435 PRINTS PR00303 Preprotein translocase SecY subunit signature 267 286 3.6E-88 T 22-04-2016 SII_RS08690 918764a35c6175b4dc30bc6f474ab8e1 435 PRINTS PR00303 Preprotein translocase SecY subunit signature 110 133 3.6E-88 T 22-04-2016 SII_RS08690 918764a35c6175b4dc30bc6f474ab8e1 435 PRINTS PR00303 Preprotein translocase SecY subunit signature 173 196 3.6E-88 T 22-04-2016 SII_RS08690 918764a35c6175b4dc30bc6f474ab8e1 435 PRINTS PR00303 Preprotein translocase SecY subunit signature 400 418 3.6E-88 T 22-04-2016 SII_RS08690 918764a35c6175b4dc30bc6f474ab8e1 435 PRINTS PR00303 Preprotein translocase SecY subunit signature 366 384 3.6E-88 T 22-04-2016 SII_RS08690 918764a35c6175b4dc30bc6f474ab8e1 435 PRINTS PR00303 Preprotein translocase SecY subunit signature 19 37 3.6E-88 T 22-04-2016 SII_RS08690 918764a35c6175b4dc30bc6f474ab8e1 435 PRINTS PR00303 Preprotein translocase SecY subunit signature 147 172 3.6E-88 T 22-04-2016 SII_RS08690 918764a35c6175b4dc30bc6f474ab8e1 435 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 16 427 1.1E-131 T 22-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 SII_RS08690 918764a35c6175b4dc30bc6f474ab8e1 435 PIRSF PIRSF004557 2 435 7.6E-116 T 22-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 SII_RS08690 918764a35c6175b4dc30bc6f474ab8e1 435 Gene3D G3DSA:1.10.3370.10 6 433 1.4E-132 T 22-04-2016 IPR023201 SecY subunit domain SII_RS08690 918764a35c6175b4dc30bc6f474ab8e1 435 Pfam PF00344 SecY translocase 69 413 2.8E-98 T 22-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 SII_RS08885 6c39737d0f677ecea352ab2a64d4b4a5 376 SUPERFAMILY SSF53756 20 372 6.28E-62 T 22-04-2016 SII_RS08885 6c39737d0f677ecea352ab2a64d4b4a5 376 Gene3D G3DSA:3.40.50.2000 186 340 2.4E-27 T 22-04-2016 SII_RS08885 6c39737d0f677ecea352ab2a64d4b4a5 376 Pfam PF13477 Glycosyl transferase 4-like 11 157 1.3E-9 T 22-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain SII_RS08885 6c39737d0f677ecea352ab2a64d4b4a5 376 Pfam PF00534 Glycosyl transferases group 1 189 351 2.2E-37 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 SII_RS08885 6c39737d0f677ecea352ab2a64d4b4a5 376 PANTHER PTHR12526 16 374 1.8E-42 T 22-04-2016 SII_RS04060 f08ed8e3105c9102e40811b2808e86a5 201 SUPERFAMILY SSF57716 140 194 2.1E-18 T 22-04-2016 SII_RS04060 f08ed8e3105c9102e40811b2808e86a5 201 PIRSF PIRSF035805 1 199 3.9E-60 T 22-04-2016 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199 SII_RS04060 f08ed8e3105c9102e40811b2808e86a5 201 Hamap MF_00124 Thymidine kinase [tdk]. 1 187 34.432 T 22-04-2016 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199 SII_RS04060 f08ed8e3105c9102e40811b2808e86a5 201 ProSitePatterns PS00603 Thymidine kinase cellular-type signature. 171 184 - T 22-04-2016 IPR020633 Thymidine kinase, conserved site GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199 SII_RS04060 f08ed8e3105c9102e40811b2808e86a5 201 Gene3D G3DSA:3.40.50.300 13 120 2.3E-6 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS04060 f08ed8e3105c9102e40811b2808e86a5 201 Pfam PF00265 Thymidine kinase 3 184 1.4E-49 T 22-04-2016 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199 SII_RS04060 f08ed8e3105c9102e40811b2808e86a5 201 SUPERFAMILY SSF52540 1 140 3.16E-38 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS04060 f08ed8e3105c9102e40811b2808e86a5 201 Gene3D G3DSA:3.30.60.20 140 190 1.5E-21 T 22-04-2016 SII_RS04060 f08ed8e3105c9102e40811b2808e86a5 201 PANTHER PTHR11441 1 196 4.4E-71 T 22-04-2016 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199 SII_RS07460 f64ab925da72f6fa978c6c7cd462eac3 121 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 1 116 5.0E-23 T 22-04-2016 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 SII_RS07460 f64ab925da72f6fa978c6c7cd462eac3 121 SUPERFAMILY SSF56214 1 115 7.59E-34 T 22-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 SII_RS07460 f64ab925da72f6fa978c6c7cd462eac3 121 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 2 116 5.1E-27 T 22-04-2016 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 SII_RS07460 f64ab925da72f6fa978c6c7cd462eac3 121 Gene3D G3DSA:3.90.470.20 1 116 1.0E-35 T 22-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 SII_RS07460 f64ab925da72f6fa978c6c7cd462eac3 121 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 3 116 21.22 T 22-04-2016 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 SII_RS07460 f64ab925da72f6fa978c6c7cd462eac3 121 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 8 115 1.0E-39 T 22-04-2016 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 SII_RS07460 f64ab925da72f6fa978c6c7cd462eac3 121 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 6 99 3.2E-21 T 22-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 SII_RS08495 c8a2e3867b0e45a080e256b9c310f669 226 Gene3D G3DSA:1.20.1540.10 9 189 1.4E-37 T 22-04-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 SII_RS08495 c8a2e3867b0e45a080e256b9c310f669 226 Pfam PF01694 Rhomboid family 55 189 6.2E-32 T 22-04-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 SII_RS08495 c8a2e3867b0e45a080e256b9c310f669 226 SUPERFAMILY SSF144091 7 195 5.36E-39 T 22-04-2016 SII_RS08495 c8a2e3867b0e45a080e256b9c310f669 226 PANTHER PTHR22936 11 218 1.2E-35 T 22-04-2016 IPR002610 Peptidase S54, rhomboid GO:0004252|GO:0006508|GO:0016021 SII_RS05175 9c0a46dda89b158125521c7d3d23b8a8 161 Pfam PF12687 Protein of unknown function (DUF3801) 38 155 3.9E-17 T 22-04-2016 IPR024234 Protein of unknown function DUF3801 SII_RS04105 0a66c7f7bb3789172c2a05c354de4254 457 Gene3D G3DSA:3.50.50.60 113 326 6.2E-46 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SII_RS04105 0a66c7f7bb3789172c2a05c354de4254 457 SUPERFAMILY SSF55424 334 455 1.17E-30 T 22-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 SII_RS04105 0a66c7f7bb3789172c2a05c354de4254 457 SUPERFAMILY SSF51905 2 327 4.37E-36 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SII_RS04105 0a66c7f7bb3789172c2a05c354de4254 457 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 318 3.4E-64 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SII_RS04105 0a66c7f7bb3789172c2a05c354de4254 457 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 345 442 3.6E-12 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 SII_RS04105 0a66c7f7bb3789172c2a05c354de4254 457 PANTHER PTHR22912:SF147 3 454 3.1E-213 T 22-04-2016 SII_RS04105 0a66c7f7bb3789172c2a05c354de4254 457 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 104 122 1.1E-23 T 22-04-2016 SII_RS04105 0a66c7f7bb3789172c2a05c354de4254 457 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 273 295 1.1E-23 T 22-04-2016 SII_RS04105 0a66c7f7bb3789172c2a05c354de4254 457 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 163 181 1.1E-23 T 22-04-2016 SII_RS04105 0a66c7f7bb3789172c2a05c354de4254 457 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 1.1E-23 T 22-04-2016 SII_RS04105 0a66c7f7bb3789172c2a05c354de4254 457 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 247 263 1.1E-23 T 22-04-2016 SII_RS04105 0a66c7f7bb3789172c2a05c354de4254 457 PANTHER PTHR22912 3 454 3.1E-213 T 22-04-2016 SII_RS04105 0a66c7f7bb3789172c2a05c354de4254 457 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 248 262 3.4E-8 T 22-04-2016 SII_RS04105 0a66c7f7bb3789172c2a05c354de4254 457 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 288 295 3.4E-8 T 22-04-2016 SII_RS04105 0a66c7f7bb3789172c2a05c354de4254 457 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 411 426 3.4E-8 T 22-04-2016 SII_RS04105 0a66c7f7bb3789172c2a05c354de4254 457 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 107 116 3.4E-8 T 22-04-2016 SII_RS04105 0a66c7f7bb3789172c2a05c354de4254 457 Gene3D G3DSA:3.50.50.60 2 112 5.9E-15 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SII_RS04105 0a66c7f7bb3789172c2a05c354de4254 457 Gene3D G3DSA:3.30.390.30 347 456 2.6E-32 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 SII_RS05980 e40f040a8bd971d43cfe57602eb7588a 1014 SMART SM00487 272 482 3.3E-14 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain SII_RS05980 e40f040a8bd971d43cfe57602eb7588a 1014 Gene3D G3DSA:3.40.50.300 275 461 1.4E-22 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS05980 e40f040a8bd971d43cfe57602eb7588a 1014 Pfam PF12008 Type I restriction and modification enzyme - subunit R C terminal 742 1009 6.4E-52 T 22-04-2016 IPR022625 Type-1 restriction enzyme R protein, C-terminal SII_RS05980 e40f040a8bd971d43cfe57602eb7588a 1014 Pfam PF04851 Type III restriction enzyme, res subunit 276 443 2.4E-36 T 22-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 SII_RS05980 e40f040a8bd971d43cfe57602eb7588a 1014 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 33 223 4.2E-48 T 22-04-2016 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 SII_RS05980 e40f040a8bd971d43cfe57602eb7588a 1014 SUPERFAMILY SSF52540 234 445 1.88E-29 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS05980 e40f040a8bd971d43cfe57602eb7588a 1014 PANTHER PTHR30195:SF16 533 916 3.1E-136 T 22-04-2016 SII_RS05980 e40f040a8bd971d43cfe57602eb7588a 1014 PANTHER PTHR30195:SF16 20 514 3.1E-136 T 22-04-2016 SII_RS05980 e40f040a8bd971d43cfe57602eb7588a 1014 TIGRFAM TIGR00348 hsdR: type I site-specific deoxyribonuclease, HsdR family 49 737 4.1E-177 T 22-04-2016 IPR004473 Restriction endonuclease, type I, HsdR GO:0003677|GO:0005524|GO:0009035|GO:0009307 SII_RS05980 e40f040a8bd971d43cfe57602eb7588a 1014 PANTHER PTHR30195 533 916 3.1E-136 T 22-04-2016 SII_RS05980 e40f040a8bd971d43cfe57602eb7588a 1014 PANTHER PTHR30195 20 514 3.1E-136 T 22-04-2016 SII_RS01275 9f2af50ed180525e67ca0c0d50a9d482 421 PANTHER PTHR33989 1 419 4.5E-130 T 22-04-2016 SII_RS01275 9f2af50ed180525e67ca0c0d50a9d482 421 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 9 420 1.6E-116 T 22-04-2016 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 SII_RS01275 9f2af50ed180525e67ca0c0d50a9d482 421 PIRSF PIRSF006351 1 421 3.1E-130 T 22-04-2016 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 SII_RS01275 9f2af50ed180525e67ca0c0d50a9d482 421 Pfam PF02378 Phosphotransferase system, EIIC 26 347 4.9E-60 T 22-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 SII_RS08830 d211c39b752e463d360ae8227a9bc96e 116 Pfam PF14317 YcxB-like protein 52 101 1.1E-6 T 22-04-2016 IPR025588 YcxB-like protein SII_RS03895 b3da7c1932c480f586dae2a24a59fdf9 112 PANTHER PTHR21075 1 111 9.1E-16 T 22-04-2016 SII_RS03895 b3da7c1932c480f586dae2a24a59fdf9 112 Pfam PF03477 ATP cone domain 1 92 1.1E-18 T 22-04-2016 IPR005144 ATP-cone domain SII_RS08705 9857a2e6d07ac656ba4c763cb3be872c 164 Pfam PF00333 Ribosomal protein S5, N-terminal domain 10 74 4.4E-32 T 22-04-2016 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 SII_RS08705 9857a2e6d07ac656ba4c763cb3be872c 164 SUPERFAMILY SSF54768 8 75 8.27E-25 T 22-04-2016 SII_RS08705 9857a2e6d07ac656ba4c763cb3be872c 164 PANTHER PTHR13718 9 160 2.6E-73 T 22-04-2016 IPR000851 Ribosomal protein S5 GO:0003735|GO:0005840|GO:0006412 SII_RS08705 9857a2e6d07ac656ba4c763cb3be872c 164 Gene3D G3DSA:3.30.160.20 9 71 1.1E-32 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain SII_RS08705 9857a2e6d07ac656ba4c763cb3be872c 164 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 9 161 3.4E-68 T 22-04-2016 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 SII_RS08705 9857a2e6d07ac656ba4c763cb3be872c 164 Gene3D G3DSA:3.30.230.10 76 157 9.4E-31 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SII_RS08705 9857a2e6d07ac656ba4c763cb3be872c 164 SUPERFAMILY SSF54211 79 157 1.26E-24 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SII_RS08705 9857a2e6d07ac656ba4c763cb3be872c 164 Pfam PF03719 Ribosomal protein S5, C-terminal domain 87 156 4.5E-28 T 22-04-2016 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 SII_RS08705 9857a2e6d07ac656ba4c763cb3be872c 164 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 162 36.099 T 22-04-2016 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 SII_RS08705 9857a2e6d07ac656ba4c763cb3be872c 164 ProSitePatterns PS00585 Ribosomal protein S5 signature. 27 59 - T 22-04-2016 IPR018192 Ribosomal protein S5, N-terminal, conserved site SII_RS03315 a0d7a231352b7be390ce1fa1c1894a4f 76 Pfam PF12645 Helix-turn-helix domain 10 74 9.5E-27 T 22-04-2016 IPR024760 Helix-turn-helix, conjugative transposon-like SII_RS01220 c816d1cfa8a09f6310d6c9c45320ab86 104 Gene3D G3DSA:3.40.30.10 2 103 1.3E-34 T 22-04-2016 IPR012336 Thioredoxin-like fold SII_RS01220 c816d1cfa8a09f6310d6c9c45320ab86 104 PRINTS PR00421 Thioredoxin family signature 68 79 2.5E-7 T 22-04-2016 SII_RS01220 c816d1cfa8a09f6310d6c9c45320ab86 104 PRINTS PR00421 Thioredoxin family signature 27 36 2.5E-7 T 22-04-2016 SII_RS01220 c816d1cfa8a09f6310d6c9c45320ab86 104 PRINTS PR00421 Thioredoxin family signature 19 27 2.5E-7 T 22-04-2016 SII_RS01220 c816d1cfa8a09f6310d6c9c45320ab86 104 Pfam PF00085 Thioredoxin 2 102 3.6E-30 T 22-04-2016 IPR013766 Thioredoxin domain GO:0045454 SII_RS01220 c816d1cfa8a09f6310d6c9c45320ab86 104 SUPERFAMILY SSF52833 2 102 2.38E-35 T 22-04-2016 IPR012336 Thioredoxin-like fold SII_RS01220 c816d1cfa8a09f6310d6c9c45320ab86 104 ProSitePatterns PS00194 Thioredoxin family active site. 20 38 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 SII_RS01220 c816d1cfa8a09f6310d6c9c45320ab86 104 PIRSF PIRSF000077 1 104 1.3E-38 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 SII_RS01220 c816d1cfa8a09f6310d6c9c45320ab86 104 PANTHER PTHR10438 1 103 8.1E-35 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 SII_RS01220 c816d1cfa8a09f6310d6c9c45320ab86 104 TIGRFAM TIGR01068 thioredoxin: thioredoxin 6 102 3.2E-35 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 SII_RS09010 be3e894adb780a7bbc15e728d490550a 184 Pfam PF03352 Methyladenine glycosylase 7 181 1.0E-76 T 22-04-2016 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 SII_RS09010 be3e894adb780a7bbc15e728d490550a 184 PANTHER PTHR30037 1 183 3.7E-100 T 22-04-2016 SII_RS09010 be3e894adb780a7bbc15e728d490550a 184 SUPERFAMILY SSF48150 3 183 1.2E-76 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 SII_RS09010 be3e894adb780a7bbc15e728d490550a 184 Gene3D G3DSA:1.10.340.30 3 182 1.1E-79 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 SII_RS09010 be3e894adb780a7bbc15e728d490550a 184 PANTHER PTHR30037:SF4 1 183 3.7E-100 T 22-04-2016 SII_RS02015 ac77ac4a573f9fa35ac17e2b14a57631 300 Gene3D G3DSA:1.10.600.10 22 262 1.1E-78 T 22-04-2016 IPR008949 Isoprenoid synthase domain SII_RS02015 ac77ac4a573f9fa35ac17e2b14a57631 300 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 207 219 - T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 SII_RS02015 ac77ac4a573f9fa35ac17e2b14a57631 300 SUPERFAMILY SSF48576 8 261 2.26E-75 T 22-04-2016 IPR008949 Isoprenoid synthase domain SII_RS02015 ac77ac4a573f9fa35ac17e2b14a57631 300 PANTHER PTHR12001:SF23 4 263 9.2E-86 T 22-04-2016 SII_RS02015 ac77ac4a573f9fa35ac17e2b14a57631 300 Pfam PF00348 Polyprenyl synthetase 27 251 1.0E-51 T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 SII_RS02015 ac77ac4a573f9fa35ac17e2b14a57631 300 PANTHER PTHR12001 4 263 9.2E-86 T 22-04-2016 IPR017446 Polyprenyl synthetase-related SII_RS02015 ac77ac4a573f9fa35ac17e2b14a57631 300 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 77 93 - T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 SII_RS08910 6cd38a0268d37eb57303a90dcbb66863 231 Pfam PF02706 Chain length determinant protein 10 145 8.4E-34 T 22-04-2016 IPR003856 Lipopolysaccharide biosynthesis GO:0009103|GO:0016020 SII_RS08910 6cd38a0268d37eb57303a90dcbb66863 231 PANTHER PTHR32309 1 228 1.1E-18 T 22-04-2016 SII_RS01875 5a890746135870795435610d3580ab22 84 Hamap MF_00386 Putative membrane protein insertion efficiency factor [yidD]. 1 68 24.744 T 22-04-2016 IPR002696 Putative membrane protein insertion efficiency factor SII_RS01875 5a890746135870795435610d3580ab22 84 PANTHER PTHR33383 1 76 1.3E-41 T 22-04-2016 SII_RS01875 5a890746135870795435610d3580ab22 84 Pfam PF01809 Haemolytic domain 2 67 5.1E-30 T 22-04-2016 IPR002696 Putative membrane protein insertion efficiency factor SII_RS01875 5a890746135870795435610d3580ab22 84 TIGRFAM TIGR00278 TIGR00278: putative membrane protein insertion efficiency factor 5 70 6.5E-28 T 22-04-2016 IPR002696 Putative membrane protein insertion efficiency factor SII_RS01875 5a890746135870795435610d3580ab22 84 SMART SM01234 1 67 1.6E-45 T 22-04-2016 IPR002696 Putative membrane protein insertion efficiency factor SII_RS01875 5a890746135870795435610d3580ab22 84 ProDom PD004225 UPF0161 ALPHA-HEMOLYSIN YIDD UNCHARACTERIZED CYTOSOLIC PRECURSOR SIGNAL YTJA RNPA SIMILAR 16 67 2.0E-20 T 22-04-2016 IPR002696 Putative membrane protein insertion efficiency factor SII_RS02290 0b538c500ae5e14632b766ce187d119d 70 PIRSF PIRSF037246 1 70 1.7E-37 T 22-04-2016 IPR017154 Uncharacterised conserved protein UCP037246 SII_RS02290 0b538c500ae5e14632b766ce187d119d 70 Pfam PF02229 Transcriptional Coactivator p15 (PC4) 19 66 9.6E-11 T 22-04-2016 IPR003173 Transcriptional coactivator p15 (PC4) GO:0003677|GO:0003713|GO:0006355 SII_RS07360 988ee5d0cf18b70e3bd087b58207be98 198 Gene3D G3DSA:1.10.3210.10 5 191 3.4E-65 T 22-04-2016 IPR006674 HD domain SII_RS07360 988ee5d0cf18b70e3bd087b58207be98 198 Pfam PF01966 HD domain 26 138 6.1E-14 T 22-04-2016 IPR006674 HD domain SII_RS07360 988ee5d0cf18b70e3bd087b58207be98 198 TIGRFAM TIGR00277 HDIG: HDIG domain 24 98 1.1E-7 T 22-04-2016 IPR006675 HDIG domain SII_RS07360 988ee5d0cf18b70e3bd087b58207be98 198 TIGRFAM TIGR00488 TIGR00488: putative HD superfamily hydrolase 18 188 3.6E-49 T 22-04-2016 IPR005249 Conserved hypothetical protein CHP00488 SII_RS07360 988ee5d0cf18b70e3bd087b58207be98 198 PANTHER PTHR35795 3 198 4.6E-69 T 22-04-2016 SII_RS07360 988ee5d0cf18b70e3bd087b58207be98 198 SMART SM00471 22 149 2.0E-8 T 22-04-2016 IPR003607 HD/PDEase domain SII_RS07360 988ee5d0cf18b70e3bd087b58207be98 198 SUPERFAMILY SSF109604 7 189 8.94E-34 T 22-04-2016 SII_RS01915 9a280cdd51cc8779359374f6881e39a7 182 PANTHER PTHR35276 1 180 9.6E-55 T 22-04-2016 SII_RS01915 9a280cdd51cc8779359374f6881e39a7 182 Gene3D G3DSA:3.40.50.150 13 133 2.4E-16 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SII_RS01915 9a280cdd51cc8779359374f6881e39a7 182 Pfam PF06962 Putative rRNA methylase 43 177 1.1E-49 T 22-04-2016 IPR010719 Putative rRNA methylase KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- SII_RS01915 9a280cdd51cc8779359374f6881e39a7 182 PANTHER PTHR35276:SF1 1 180 9.6E-55 T 22-04-2016 SII_RS01915 9a280cdd51cc8779359374f6881e39a7 182 SUPERFAMILY SSF53335 6 173 1.18E-21 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SII_RS07690 b0d4ebcb552774c1a8963333f95004bd 685 Pfam PF00874 PRD domain 292 380 1.6E-18 T 22-04-2016 IPR011608 PRD domain GO:0006355 SII_RS07690 b0d4ebcb552774c1a8963333f95004bd 685 SUPERFAMILY SSF63520 283 383 1.1E-21 T 22-04-2016 IPR011608 PRD domain GO:0006355 SII_RS07690 b0d4ebcb552774c1a8963333f95004bd 685 SUPERFAMILY SSF55804 528 676 1.02E-35 T 22-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 SII_RS07690 b0d4ebcb552774c1a8963333f95004bd 685 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 531 676 1.8E-31 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SII_RS07690 b0d4ebcb552774c1a8963333f95004bd 685 Gene3D G3DSA:3.40.930.10 528 680 7.9E-50 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SII_RS07690 b0d4ebcb552774c1a8963333f95004bd 685 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 577 593 - T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SII_RS07690 b0d4ebcb552774c1a8963333f95004bd 685 SUPERFAMILY SSF52794 395 466 2.41E-5 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 SII_RS07690 b0d4ebcb552774c1a8963333f95004bd 685 Gene3D G3DSA:1.10.1790.10 286 384 1.7E-20 T 22-04-2016 IPR011608 PRD domain GO:0006355 SII_RS07690 b0d4ebcb552774c1a8963333f95004bd 685 PANTHER PTHR36203 1 682 1.4E-84 T 22-04-2016 SII_RS03835 f88a127afeaa685c582e44165c139322 766 SUPERFAMILY SSF81296 128 246 1.24E-14 T 22-04-2016 IPR014756 Immunoglobulin E-set SII_RS03835 f88a127afeaa685c582e44165c139322 766 TIGRFAM TIGR02104 pulA_typeI: pullulanase, type I 127 734 7.9E-229 T 22-04-2016 IPR011840 Pullulanase, type I SII_RS03835 f88a127afeaa685c582e44165c139322 766 Gene3D G3DSA:3.20.20.80 258 686 3.2E-87 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 SII_RS03835 f88a127afeaa685c582e44165c139322 766 SUPERFAMILY SSF51445 257 681 5.94E-105 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily SII_RS03835 f88a127afeaa685c582e44165c139322 766 Gene3D G3DSA:2.60.40.10 128 240 2.4E-15 T 22-04-2016 IPR013783 Immunoglobulin-like fold SII_RS03835 f88a127afeaa685c582e44165c139322 766 Pfam PF00128 Alpha amylase, catalytic domain 312 398 1.4E-8 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 SII_RS03835 f88a127afeaa685c582e44165c139322 766 Pfam PF00128 Alpha amylase, catalytic domain 433 622 1.9E-5 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 SII_RS03835 f88a127afeaa685c582e44165c139322 766 PANTHER PTHR10357:SF99 646 735 7.7E-140 T 22-04-2016 SII_RS03835 f88a127afeaa685c582e44165c139322 766 PANTHER PTHR10357:SF99 142 630 7.7E-140 T 22-04-2016 SII_RS03835 f88a127afeaa685c582e44165c139322 766 SUPERFAMILY SSF49452 4 101 3.6E-19 T 22-04-2016 IPR013784 Carbohydrate-binding-like fold GO:0030246 SII_RS03835 f88a127afeaa685c582e44165c139322 766 PANTHER PTHR10357 646 735 7.7E-140 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 SII_RS03835 f88a127afeaa685c582e44165c139322 766 PANTHER PTHR10357 142 630 7.7E-140 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 SII_RS03835 f88a127afeaa685c582e44165c139322 766 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 137 227 1.6E-8 T 22-04-2016 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 SII_RS03835 f88a127afeaa685c582e44165c139322 766 Pfam PF03714 Bacterial pullanase-associated domain 6 99 7.4E-11 T 22-04-2016 IPR005323 Bacterial pullanase-associated domain GO:0005975|GO:0030246 SII_RS03835 f88a127afeaa685c582e44165c139322 766 SMART SM00642 292 660 1.1E-5 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 SII_RS05500 062624dd1eab0dcec6698a4a08106571 547 SUPERFAMILY SSF55874 406 544 7.6E-10 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SII_RS05500 062624dd1eab0dcec6698a4a08106571 547 Pfam PF06580 Histidine kinase 339 415 4.5E-21 T 22-04-2016 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 SII_RS05500 062624dd1eab0dcec6698a4a08106571 547 Gene3D G3DSA:3.30.565.10 392 545 7.1E-12 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SII_RS05500 062624dd1eab0dcec6698a4a08106571 547 PANTHER PTHR34220 240 489 9.8E-54 T 22-04-2016 SII_RS05500 062624dd1eab0dcec6698a4a08106571 547 PANTHER PTHR34220 505 544 9.8E-54 T 22-04-2016 SII_RS05500 062624dd1eab0dcec6698a4a08106571 547 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 440 546 6.7E-5 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SII_RS06205 2694d5e58b8b865091af572097b35b6c 393 Pfam PF11187 Protein of unknown function (DUF2974) 83 303 9.7E-90 T 22-04-2016 IPR024499 Protein of unknown function DUF2974 SII_RS06205 2694d5e58b8b865091af572097b35b6c 393 SUPERFAMILY SSF53474 80 237 3.03E-23 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SII_RS06205 2694d5e58b8b865091af572097b35b6c 393 Gene3D G3DSA:3.40.50.1820 80 202 2.8E-13 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SII_RS01820 cc5a11e2ed2c24c32f4c627b34fcdd07 227 PANTHER PTHR23291 1 227 2.6E-67 T 22-04-2016 IPR006214 Bax inhibitor 1-related SII_RS01820 cc5a11e2ed2c24c32f4c627b34fcdd07 227 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 14 223 3.6E-52 T 22-04-2016 SII_RS01820 cc5a11e2ed2c24c32f4c627b34fcdd07 227 PANTHER PTHR23291:SF42 1 227 2.6E-67 T 22-04-2016 SII_RS08030 0817c3401202158184c2ded28982d7fb 468 Pfam PF00534 Glycosyl transferases group 1 291 445 1.4E-23 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 SII_RS08030 0817c3401202158184c2ded28982d7fb 468 PANTHER PTHR12526 116 465 1.5E-44 T 22-04-2016 SII_RS08030 0817c3401202158184c2ded28982d7fb 468 PANTHER PTHR12526 1 43 1.5E-44 T 22-04-2016 SII_RS08030 0817c3401202158184c2ded28982d7fb 468 Gene3D G3DSA:3.40.50.2000 256 443 8.4E-17 T 22-04-2016 SII_RS08030 0817c3401202158184c2ded28982d7fb 468 Pfam PF11997 Domain of unknown function (DUF3492) 1 257 1.0E-86 T 22-04-2016 IPR022622 Domain of unknown function DUF3492 SII_RS08030 0817c3401202158184c2ded28982d7fb 468 SUPERFAMILY SSF53756 2 64 4.17E-59 T 22-04-2016 SII_RS08030 0817c3401202158184c2ded28982d7fb 468 SUPERFAMILY SSF53756 138 465 4.17E-59 T 22-04-2016 SII_RS06930 baf763635ea03e13705d25708d763b69 62 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 56 2.9E-21 T 22-04-2016 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SII_RS06930 baf763635ea03e13705d25708d763b69 62 SUPERFAMILY SSF143800 1 60 3.73E-24 T 22-04-2016 SII_RS06930 baf763635ea03e13705d25708d763b69 62 PANTHER PTHR39080:SF1 2 62 3.1E-22 T 22-04-2016 SII_RS06930 baf763635ea03e13705d25708d763b69 62 PANTHER PTHR39080 2 62 3.1E-22 T 22-04-2016 SII_RS06930 baf763635ea03e13705d25708d763b69 62 Gene3D G3DSA:4.10.1160.10 19 61 5.9E-22 T 22-04-2016 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SII_RS06930 baf763635ea03e13705d25708d763b69 62 Pfam PF00830 Ribosomal L28 family 3 58 1.3E-21 T 22-04-2016 IPR026569 Ribosomal protein L28/L24 GO:0003735 SII_RS06930 baf763635ea03e13705d25708d763b69 62 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 62 18.095 T 22-04-2016 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SII_RS06120 13753fa8e95c65e83162d52ddac02c9a 67 SUPERFAMILY SSF50249 1 65 1.48E-24 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SII_RS06120 13753fa8e95c65e83162d52ddac02c9a 67 SMART SM00357 3 66 6.1E-30 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 SII_RS06120 13753fa8e95c65e83162d52ddac02c9a 67 PANTHER PTHR11544 1 66 2.8E-37 T 22-04-2016 SII_RS06120 13753fa8e95c65e83162d52ddac02c9a 67 PIRSF PIRSF002599 1 67 2.4E-24 T 22-04-2016 IPR012156 Cold shock, CspA GO:0003676 SII_RS06120 13753fa8e95c65e83162d52ddac02c9a 67 PRINTS PR00050 Cold shock protein signature 39 57 1.3E-17 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 SII_RS06120 13753fa8e95c65e83162d52ddac02c9a 67 PRINTS PR00050 Cold shock protein signature 24 33 1.3E-17 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 SII_RS06120 13753fa8e95c65e83162d52ddac02c9a 67 PRINTS PR00050 Cold shock protein signature 4 19 1.3E-17 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 SII_RS06120 13753fa8e95c65e83162d52ddac02c9a 67 Gene3D G3DSA:2.40.50.140 1 64 1.5E-31 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SII_RS06120 13753fa8e95c65e83162d52ddac02c9a 67 Pfam PF00313 'Cold-shock' DNA-binding domain 3 65 3.2E-29 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 SII_RS06120 13753fa8e95c65e83162d52ddac02c9a 67 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 33 - T 22-04-2016 IPR019844 Cold-shock conserved site SII_RS01540 5fd0af621f8d45015877f9c76a7403fb 170 Gene3D G3DSA:1.10.1740.10 16 104 1.9E-4 T 22-04-2016 SII_RS01540 5fd0af621f8d45015877f9c76a7403fb 170 SUPERFAMILY SSF88946 15 103 1.73E-6 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SII_RS02465 1884a8d768077d168cb9ea6e78b13e5d 93 Pfam PF04204 Homoserine O-succinyltransferase 1 92 1.2E-23 T 22-04-2016 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46|UniPathway: UPA00051 SII_RS02465 1884a8d768077d168cb9ea6e78b13e5d 93 Gene3D G3DSA:3.40.50.880 1 93 1.9E-23 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like SII_RS02465 1884a8d768077d168cb9ea6e78b13e5d 93 ProDom PD037892 HOMOSERINE O-SUCCINYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIOSYNTHESIS TRANSSUCCINYLASE HTS METHIONINE O- AMINO-ACID 1 82 1.0E-26 T 22-04-2016 SII_RS02465 1884a8d768077d168cb9ea6e78b13e5d 93 PANTHER PTHR20919:SF0 1 93 8.5E-17 T 22-04-2016 SII_RS02465 1884a8d768077d168cb9ea6e78b13e5d 93 PANTHER PTHR20919 1 93 8.5E-17 T 22-04-2016 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46|UniPathway: UPA00051 SII_RS02465 1884a8d768077d168cb9ea6e78b13e5d 93 SUPERFAMILY SSF52317 2 90 4.21E-14 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like SII_RS06235 21ec6e10f77e22b27a4a4edc1fbb1174 93 PANTHER PTHR33154 1 84 1.5E-20 T 22-04-2016 SII_RS06235 21ec6e10f77e22b27a4a4edc1fbb1174 93 SUPERFAMILY SSF46785 2 83 1.78E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SII_RS06235 21ec6e10f77e22b27a4a4edc1fbb1174 93 Pfam PF12840 Helix-turn-helix domain 5 61 4.0E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SII_RS06235 21ec6e10f77e22b27a4a4edc1fbb1174 93 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 39 54 1.8E-10 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SII_RS06235 21ec6e10f77e22b27a4a4edc1fbb1174 93 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 54 69 1.8E-10 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SII_RS06235 21ec6e10f77e22b27a4a4edc1fbb1174 93 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 7 22 1.8E-10 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SII_RS06235 21ec6e10f77e22b27a4a4edc1fbb1174 93 SMART SM00418 5 83 3.6E-24 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SII_RS06235 21ec6e10f77e22b27a4a4edc1fbb1174 93 Gene3D G3DSA:1.10.10.10 3 89 3.5E-29 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SII_RS07970 8da02a4d73a1bc3679c330b9a22d6813 195 Gene3D G3DSA:1.10.3130.10 8 62 2.0E-23 T 22-04-2016 SII_RS07970 8da02a4d73a1bc3679c330b9a22d6813 195 Gene3D G3DSA:2.160.10.10 63 190 6.7E-31 T 22-04-2016 SII_RS07970 8da02a4d73a1bc3679c330b9a22d6813 195 PANTHER PTHR23416 8 187 4.6E-78 T 22-04-2016 SII_RS07970 8da02a4d73a1bc3679c330b9a22d6813 195 PANTHER PTHR23416:SF55 8 187 4.6E-78 T 22-04-2016 SII_RS07970 8da02a4d73a1bc3679c330b9a22d6813 195 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 6 166 1.4E-68 T 22-04-2016 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|UniPathway: UPA00136 SII_RS07970 8da02a4d73a1bc3679c330b9a22d6813 195 PIRSF PIRSF000441 1 194 4.2E-68 T 22-04-2016 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|UniPathway: UPA00136 SII_RS07970 8da02a4d73a1bc3679c330b9a22d6813 195 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 118 150 5.4E-7 T 22-04-2016 IPR001451 Hexapeptide repeat SII_RS07970 8da02a4d73a1bc3679c330b9a22d6813 195 SUPERFAMILY SSF51161 4 175 2.36E-50 T 22-04-2016 IPR011004 Trimeric LpxA-like SII_RS07350 9b208fce89c4c2ec9047f2c4274de96a 117 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 3 105 25.582 T 22-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS SII_RS07350 9b208fce89c4c2ec9047f2c4274de96a 117 Pfam PF02410 Ribosomal silencing factor during starvation 10 104 8.3E-28 T 22-04-2016 SII_RS07350 9b208fce89c4c2ec9047f2c4274de96a 117 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 7 104 7.8E-36 T 22-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS SII_RS07350 9b208fce89c4c2ec9047f2c4274de96a 117 SUPERFAMILY SSF81301 1 114 5.56E-40 T 22-04-2016 SII_RS07350 9b208fce89c4c2ec9047f2c4274de96a 117 Gene3D G3DSA:3.30.460.10 2 107 1.7E-39 T 22-04-2016 SII_RS07350 9b208fce89c4c2ec9047f2c4274de96a 117 PANTHER PTHR21043 1 111 1.6E-41 T 22-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS SII_RS00360 5754ca710a6cdb45811d874cdb3d6dce 134 PANTHER PTHR33799 3 101 4.9E-27 T 22-04-2016 SII_RS00360 5754ca710a6cdb45811d874cdb3d6dce 134 Gene3D G3DSA:3.40.50.510 2 133 6.5E-38 T 22-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 SII_RS00360 5754ca710a6cdb45811d874cdb3d6dce 134 SUPERFAMILY SSF53062 2 123 4.97E-31 T 22-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 SII_RS00360 5754ca710a6cdb45811d874cdb3d6dce 134 Pfam PF03610 PTS system fructose IIA component 5 102 2.7E-20 T 22-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 SII_RS07085 d10cedc3926b3b6148cbd9f658795114 99 Pfam PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 5 93 1.3E-14 T 22-04-2016 IPR004038 Ribosomal protein L7Ae/L30e/S12e/Gadd45 SII_RS07085 d10cedc3926b3b6148cbd9f658795114 99 SUPERFAMILY SSF55315 4 98 1.22E-23 T 22-04-2016 IPR029064 50S ribosomal protein L30e-like SII_RS07085 d10cedc3926b3b6148cbd9f658795114 99 Gene3D G3DSA:3.30.1330.30 3 97 2.7E-21 T 22-04-2016 IPR029064 50S ribosomal protein L30e-like SII_RS08005 268e654ccfdaf5c51ca6eb5ce58822e6 457 SUPERFAMILY SSF51445 68 219 1.69E-7 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily SII_RS08005 268e654ccfdaf5c51ca6eb5ce58822e6 457 Gene3D G3DSA:3.20.20.80 66 195 1.2E-8 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 SII_RS08005 268e654ccfdaf5c51ca6eb5ce58822e6 457 Pfam PF16116 Domain of unknown function (DUF4832) 237 443 1.8E-20 T 22-04-2016 IPR032267 Domain of unknown function DUF4832 SII_RS05215 7e770b3e4ac02e8960da9e19d43df43e 112 Hamap MF_01526 UPF0342 protein . 1 112 17.979 T 22-04-2016 IPR010368 Control of competence regulator ComK, YlbF/YmcA SII_RS05215 7e770b3e4ac02e8960da9e19d43df43e 112 Pfam PF06133 Control of competence regulator ComK, YlbF/YmcA 4 108 1.1E-24 T 22-04-2016 IPR010368 Control of competence regulator ComK, YlbF/YmcA SII_RS05215 7e770b3e4ac02e8960da9e19d43df43e 112 SUPERFAMILY SSF158622 1 110 5.23E-33 T 22-04-2016 IPR023378 YheA/YmcA-like domain SII_RS05215 7e770b3e4ac02e8960da9e19d43df43e 112 Gene3D G3DSA:1.20.1500.10 1 112 4.3E-42 T 22-04-2016 IPR023378 YheA/YmcA-like domain SII_RS05215 7e770b3e4ac02e8960da9e19d43df43e 112 PANTHER PTHR41254 1 111 7.2E-34 T 22-04-2016 SII_RS08720 171b4e536dd3e62ac4d6ad21da9a522b 132 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 132 32.704 T 22-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 SII_RS08720 171b4e536dd3e62ac4d6ad21da9a522b 132 SUPERFAMILY SSF56047 2 132 4.71E-49 T 22-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 SII_RS08720 171b4e536dd3e62ac4d6ad21da9a522b 132 Gene3D G3DSA:3.30.1370.30 2 73 1.9E-30 T 22-04-2016 SII_RS08720 171b4e536dd3e62ac4d6ad21da9a522b 132 Gene3D G3DSA:3.30.1490.10 76 132 1.5E-29 T 22-04-2016 SII_RS08720 171b4e536dd3e62ac4d6ad21da9a522b 132 Pfam PF00410 Ribosomal protein S8 5 132 6.1E-53 T 22-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 SII_RS08720 171b4e536dd3e62ac4d6ad21da9a522b 132 PANTHER PTHR11758 1 132 1.9E-67 T 22-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 SII_RS08720 171b4e536dd3e62ac4d6ad21da9a522b 132 ProSitePatterns PS00053 Ribosomal protein S8 signature. 102 119 - T 22-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 SII_RS02275 51898b4817f3af23a074e8cd1e266629 288 PANTHER PTHR32196 2 279 3.1E-78 T 22-04-2016 SII_RS02275 51898b4817f3af23a074e8cd1e266629 288 PANTHER PTHR32196:SF27 2 279 3.1E-78 T 22-04-2016 SII_RS02275 51898b4817f3af23a074e8cd1e266629 288 Pfam PF02653 Branched-chain amino acid transport system / permease component 2 269 1.3E-31 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 SII_RS08135 034615102821dbb4ed2a779ff6de482a 156 Gene3D G3DSA:3.40.630.30 1 145 5.0E-26 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SII_RS08135 034615102821dbb4ed2a779ff6de482a 156 Pfam PF13673 Acetyltransferase (GNAT) domain 37 154 1.6E-14 T 22-04-2016 IPR000182 GNAT domain GO:0008080 SII_RS08135 034615102821dbb4ed2a779ff6de482a 156 PANTHER PTHR23091 1 153 4.7E-16 T 22-04-2016 SII_RS08135 034615102821dbb4ed2a779ff6de482a 156 SUPERFAMILY SSF55729 1 153 5.73E-25 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SII_RS04595 8baf1ccb6dd36c24ca279075255679ed 582 PANTHER PTHR24221:SF271 10 577 7.3E-269 T 22-04-2016 SII_RS04595 8baf1ccb6dd36c24ca279075255679ed 582 SMART SM00382 367 560 2.3E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain SII_RS04595 8baf1ccb6dd36c24ca279075255679ed 582 SUPERFAMILY SSF90123 11 324 5.89E-66 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SII_RS04595 8baf1ccb6dd36c24ca279075255679ed 582 Gene3D G3DSA:1.20.1560.10 11 323 1.2E-65 T 22-04-2016 SII_RS04595 8baf1ccb6dd36c24ca279075255679ed 582 Gene3D G3DSA:3.40.50.300 341 573 2.1E-74 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS04595 8baf1ccb6dd36c24ca279075255679ed 582 ProSitePatterns PS00211 ABC transporters family signature. 479 493 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SII_RS04595 8baf1ccb6dd36c24ca279075255679ed 582 Pfam PF00664 ABC transporter transmembrane region 25 295 1.3E-40 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SII_RS04595 8baf1ccb6dd36c24ca279075255679ed 582 PANTHER PTHR24221 10 577 7.3E-269 T 22-04-2016 SII_RS04595 8baf1ccb6dd36c24ca279075255679ed 582 Pfam PF00005 ABC transporter 359 507 1.1E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SII_RS04595 8baf1ccb6dd36c24ca279075255679ed 582 SUPERFAMILY SSF52540 335 577 1.7E-85 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS08500 bde5d3c7092809b8ff7b7e0d25359eaa 175 Gene3D G3DSA:3.40.50.10420 2 172 9.7E-45 T 22-04-2016 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain SII_RS08500 bde5d3c7092809b8ff7b7e0d25359eaa 175 PANTHER PTHR23407 1 175 1.2E-39 T 22-04-2016 SII_RS08500 bde5d3c7092809b8ff7b7e0d25359eaa 175 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 2 172 1.4E-39 T 22-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase SII_RS08500 bde5d3c7092809b8ff7b7e0d25359eaa 175 SUPERFAMILY SSF100950 2 172 3.35E-46 T 22-04-2016 SII_RS08500 bde5d3c7092809b8ff7b7e0d25359eaa 175 PANTHER PTHR23407:SF1 1 175 1.2E-39 T 22-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase SII_RS08500 bde5d3c7092809b8ff7b7e0d25359eaa 175 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 2 172 2.8E-46 T 22-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase SII_RS08500 bde5d3c7092809b8ff7b7e0d25359eaa 175 PIRSF PIRSF006806 1 175 1.3E-41 T 22-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase SII_RS03870 309707cd7adfe1101d4f1206d9e40761 223 PANTHER PTHR35145:SF1 1 223 1.6E-53 T 22-04-2016 SII_RS03870 309707cd7adfe1101d4f1206d9e40761 223 SUPERFAMILY SSF142906 102 223 3.4E-21 T 22-04-2016 SII_RS03870 309707cd7adfe1101d4f1206d9e40761 223 PANTHER PTHR35145 1 223 1.6E-53 T 22-04-2016 SII_RS03870 309707cd7adfe1101d4f1206d9e40761 223 Pfam PF04237 YjbR 133 219 1.0E-8 T 22-04-2016 IPR007351 Uncharacterised protein YjbR SII_RS03830 1d22e5a1fc7435290e08b42dc731d05c 319 Pfam PF00781 Diacylglycerol kinase catalytic domain 8 132 7.5E-32 T 22-04-2016 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 SII_RS03830 1d22e5a1fc7435290e08b42dc731d05c 319 PANTHER PTHR12358:SF41 5 315 4.1E-120 T 22-04-2016 SII_RS03830 1d22e5a1fc7435290e08b42dc731d05c 319 SUPERFAMILY SSF111331 6 303 2.16E-71 T 22-04-2016 IPR016064 NAD kinase/diacylglycerol kinase-like domain SII_RS03830 1d22e5a1fc7435290e08b42dc731d05c 319 TIGRFAM TIGR00147 TIGR00147: lipid kinase, YegS/Rv2252/BmrU family 6 300 2.4E-72 T 22-04-2016 IPR005218 Diacylglycerol/lipid kinase SII_RS03830 1d22e5a1fc7435290e08b42dc731d05c 319 Gene3D G3DSA:3.40.50.10330 48 98 1.1E-4 T 22-04-2016 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 GO:0003951|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 SII_RS03830 1d22e5a1fc7435290e08b42dc731d05c 319 SMART SM00046 7 131 1.1E-4 T 22-04-2016 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 SII_RS03830 1d22e5a1fc7435290e08b42dc731d05c 319 PANTHER PTHR12358 5 315 4.1E-120 T 22-04-2016 SII_RS05865 35bacf57410e3363cf24947df4019178 315 PRINTS PR01469 Bacterial carbamate kinase signature 110 129 2.0E-62 T 22-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 SII_RS05865 35bacf57410e3363cf24947df4019178 315 PRINTS PR01469 Bacterial carbamate kinase signature 268 283 2.0E-62 T 22-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 SII_RS05865 35bacf57410e3363cf24947df4019178 315 PRINTS PR01469 Bacterial carbamate kinase signature 43 62 2.0E-62 T 22-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 SII_RS05865 35bacf57410e3363cf24947df4019178 315 PRINTS PR01469 Bacterial carbamate kinase signature 75 93 2.0E-62 T 22-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 SII_RS05865 35bacf57410e3363cf24947df4019178 315 PRINTS PR01469 Bacterial carbamate kinase signature 182 200 2.0E-62 T 22-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 SII_RS05865 35bacf57410e3363cf24947df4019178 315 PRINTS PR01469 Bacterial carbamate kinase signature 213 228 2.0E-62 T 22-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 SII_RS05865 35bacf57410e3363cf24947df4019178 315 PRINTS PR01469 Bacterial carbamate kinase signature 159 178 2.0E-62 T 22-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 SII_RS05865 35bacf57410e3363cf24947df4019178 315 Gene3D G3DSA:3.40.1160.10 3 313 9.6E-110 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SII_RS05865 35bacf57410e3363cf24947df4019178 315 SUPERFAMILY SSF53633 4 312 1.01E-84 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SII_RS05865 35bacf57410e3363cf24947df4019178 315 TIGRFAM TIGR00746 arcC: carbamate kinase 4 313 1.8E-130 T 22-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 SII_RS05865 35bacf57410e3363cf24947df4019178 315 PANTHER PTHR30409 1 315 1.6E-157 T 22-04-2016 SII_RS05865 35bacf57410e3363cf24947df4019178 315 PANTHER PTHR30409:SF1 1 315 1.6E-157 T 22-04-2016 SII_RS05865 35bacf57410e3363cf24947df4019178 315 PIRSF PIRSF000723 2 314 5.3E-122 T 22-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 SII_RS05865 35bacf57410e3363cf24947df4019178 315 Pfam PF00696 Amino acid kinase family 5 286 3.3E-30 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SII_RS01700 4f6264cf81b23a94840ae6ef33d83d16 178 PANTHER PTHR41303:SF1 1 178 3.5E-46 T 22-04-2016 SII_RS01700 4f6264cf81b23a94840ae6ef33d83d16 178 PANTHER PTHR41303 1 178 3.5E-46 T 22-04-2016 SII_RS01700 4f6264cf81b23a94840ae6ef33d83d16 178 Pfam PF02620 Uncharacterized ACR, COG1399 54 174 7.1E-21 T 22-04-2016 IPR003772 Protein of unknown function DUF177 SII_RS06090 0fa807eb09ecee464c8f70cb3e8eb8b6 149 PANTHER PTHR39203 1 147 3.7E-50 T 22-04-2016 SII_RS06090 0fa807eb09ecee464c8f70cb3e8eb8b6 149 Pfam PF04266 ASCH domain 29 144 1.3E-30 T 22-04-2016 IPR007374 ASCH domain SII_RS06090 0fa807eb09ecee464c8f70cb3e8eb8b6 149 SUPERFAMILY SSF88697 2 146 2.98E-55 T 22-04-2016 IPR015947 PUA-like domain SII_RS06090 0fa807eb09ecee464c8f70cb3e8eb8b6 149 SMART SM01022 24 144 8.0E-48 T 22-04-2016 IPR007374 ASCH domain SII_RS06090 0fa807eb09ecee464c8f70cb3e8eb8b6 149 Gene3D G3DSA:3.10.400.10 1 147 1.2E-66 T 22-04-2016 SII_RS06090 0fa807eb09ecee464c8f70cb3e8eb8b6 149 PIRSF PIRSF021320 1 147 2.8E-61 T 22-04-2016 IPR009326 Protein of unknown function DUF984 SII_RS04190 28eadd8a59efddeab1a5a977b36222c0 438 Gene3D G3DSA:3.50.50.60 4 121 5.8E-25 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SII_RS04190 28eadd8a59efddeab1a5a977b36222c0 438 SUPERFAMILY SSF55424 323 436 6.87E-30 T 22-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 SII_RS04190 28eadd8a59efddeab1a5a977b36222c0 438 Gene3D G3DSA:3.50.50.60 122 314 7.3E-49 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SII_RS04190 28eadd8a59efddeab1a5a977b36222c0 438 PANTHER PTHR22912:SF145 1 438 4.4E-205 T 22-04-2016 SII_RS04190 28eadd8a59efddeab1a5a977b36222c0 438 PANTHER PTHR22912 1 438 4.4E-205 T 22-04-2016 SII_RS04190 28eadd8a59efddeab1a5a977b36222c0 438 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 286 293 1.8E-49 T 22-04-2016 SII_RS04190 28eadd8a59efddeab1a5a977b36222c0 438 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 323 344 1.8E-49 T 22-04-2016 SII_RS04190 28eadd8a59efddeab1a5a977b36222c0 438 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 1.8E-49 T 22-04-2016 SII_RS04190 28eadd8a59efddeab1a5a977b36222c0 438 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 122 131 1.8E-49 T 22-04-2016 SII_RS04190 28eadd8a59efddeab1a5a977b36222c0 438 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 243 257 1.8E-49 T 22-04-2016 SII_RS04190 28eadd8a59efddeab1a5a977b36222c0 438 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 159 184 1.8E-49 T 22-04-2016 SII_RS04190 28eadd8a59efddeab1a5a977b36222c0 438 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 39 54 1.8E-49 T 22-04-2016 SII_RS04190 28eadd8a59efddeab1a5a977b36222c0 438 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 410 430 1.8E-49 T 22-04-2016 SII_RS04190 28eadd8a59efddeab1a5a977b36222c0 438 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 388 403 1.8E-49 T 22-04-2016 SII_RS04190 28eadd8a59efddeab1a5a977b36222c0 438 PIRSF PIRSF000350 2 435 2.4E-80 T 22-04-2016 SII_RS04190 28eadd8a59efddeab1a5a977b36222c0 438 Gene3D G3DSA:3.30.390.30 323 436 5.0E-32 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 SII_RS04190 28eadd8a59efddeab1a5a977b36222c0 438 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 242 258 1.9E-31 T 22-04-2016 SII_RS04190 28eadd8a59efddeab1a5a977b36222c0 438 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 159 177 1.9E-31 T 22-04-2016 SII_RS04190 28eadd8a59efddeab1a5a977b36222c0 438 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 119 137 1.9E-31 T 22-04-2016 SII_RS04190 28eadd8a59efddeab1a5a977b36222c0 438 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 1.9E-31 T 22-04-2016 SII_RS04190 28eadd8a59efddeab1a5a977b36222c0 438 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 271 293 1.9E-31 T 22-04-2016 SII_RS04190 28eadd8a59efddeab1a5a977b36222c0 438 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 4 299 3.2E-57 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SII_RS04190 28eadd8a59efddeab1a5a977b36222c0 438 SUPERFAMILY SSF51905 4 301 2.85E-47 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SII_RS04190 28eadd8a59efddeab1a5a977b36222c0 438 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 327 433 1.6E-25 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 SII_RS07420 d62aa2ce3989fbfafb5c26ea7c86fa15 191 Pfam PF00857 Isochorismatase family 4 177 1.7E-36 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 SII_RS07420 d62aa2ce3989fbfafb5c26ea7c86fa15 191 SUPERFAMILY SSF52499 2 181 1.44E-51 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 SII_RS07420 d62aa2ce3989fbfafb5c26ea7c86fa15 191 Gene3D G3DSA:3.40.50.850 2 179 2.5E-48 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 SII_RS07420 d62aa2ce3989fbfafb5c26ea7c86fa15 191 PANTHER PTHR11080 1 183 4.2E-44 T 22-04-2016 SII_RS01735 cf954d9f94a91d694b862ba0ef8f89f9 157 Pfam PF03477 ATP cone domain 50 136 1.1E-19 T 22-04-2016 IPR005144 ATP-cone domain SII_RS01735 cf954d9f94a91d694b862ba0ef8f89f9 157 PANTHER PTHR30455:SF2 2 156 7.2E-68 T 22-04-2016 SII_RS01735 cf954d9f94a91d694b862ba0ef8f89f9 157 PANTHER PTHR30455 2 156 7.2E-68 T 22-04-2016 SII_RS01735 cf954d9f94a91d694b862ba0ef8f89f9 157 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 146 1.1E-56 T 22-04-2016 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 SII_RS01735 cf954d9f94a91d694b862ba0ef8f89f9 157 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 153 83.128 T 22-04-2016 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 SII_RS05395 0f7b58583b171b8769f5e933cdc89778 72 Pfam PF00462 Glutaredoxin 2 53 2.6E-13 T 22-04-2016 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 SII_RS05395 0f7b58583b171b8769f5e933cdc89778 72 Gene3D G3DSA:3.40.30.10 1 71 3.0E-25 T 22-04-2016 IPR012336 Thioredoxin-like fold SII_RS05395 0f7b58583b171b8769f5e933cdc89778 72 SUPERFAMILY SSF52833 1 70 3.09E-17 T 22-04-2016 IPR012336 Thioredoxin-like fold SII_RS05395 0f7b58583b171b8769f5e933cdc89778 72 TIGRFAM TIGR02194 GlrX_NrdH: glutaredoxin-like protein NrdH 2 71 9.8E-35 T 22-04-2016 IPR011909 Glutaredoxin-like protein NrdH GO:0045454 SII_RS05395 0f7b58583b171b8769f5e933cdc89778 72 PANTHER PTHR34386:SF1 1 71 5.1E-16 T 22-04-2016 SII_RS05395 0f7b58583b171b8769f5e933cdc89778 72 PANTHER PTHR34386 1 71 5.1E-16 T 22-04-2016 SII_RS04425 6ef12ae9b3e51756d5583267f477d601 306 PANTHER PTHR10285 268 306 1.7E-131 T 22-04-2016 SII_RS04425 6ef12ae9b3e51756d5583267f477d601 306 PANTHER PTHR10285 1 252 1.7E-131 T 22-04-2016 SII_RS04425 6ef12ae9b3e51756d5583267f477d601 306 PIRSF PIRSF000545 1 306 1.3E-136 T 22-04-2016 IPR004566 Bacterial pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 SII_RS04425 6ef12ae9b3e51756d5583267f477d601 306 Hamap MF_00215 Pantothenate kinase [coaA]. 1 306 145.752 T 22-04-2016 IPR004566 Bacterial pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 SII_RS04425 6ef12ae9b3e51756d5583267f477d601 306 PANTHER PTHR10285:SF7 268 306 1.7E-131 T 22-04-2016 IPR004566 Bacterial pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 SII_RS04425 6ef12ae9b3e51756d5583267f477d601 306 PANTHER PTHR10285:SF7 1 252 1.7E-131 T 22-04-2016 IPR004566 Bacterial pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 SII_RS04425 6ef12ae9b3e51756d5583267f477d601 306 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 86 223 3.5E-14 T 22-04-2016 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0008152|GO:0016301 SII_RS04425 6ef12ae9b3e51756d5583267f477d601 306 Gene3D G3DSA:3.40.50.300 7 306 1.3E-102 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS04425 6ef12ae9b3e51756d5583267f477d601 306 SUPERFAMILY SSF52540 3 305 2.71E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS04425 6ef12ae9b3e51756d5583267f477d601 306 TIGRFAM TIGR00554 panK_bact: pantothenate kinase 8 306 1.7E-99 T 22-04-2016 IPR004566 Bacterial pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 SII_RS00580 61674dd2aaebe817046400183e8fd131 1922 TIGRFAM TIGR01167 LPXTG_anchor: LPXTG cell wall anchor domain 1892 1921 0.0018 T 22-04-2016 IPR019931 LPXTG cell wall anchor domain SII_RS00580 61674dd2aaebe817046400183e8fd131 1922 TIGRFAM TIGR03786 strep_pil_rpt: streptococcal pilin isopeptide linkage domain 907 971 5.2E-19 T 22-04-2016 IPR022464 Streptococcal pilin isopeptide linker SII_RS00580 61674dd2aaebe817046400183e8fd131 1922 TIGRFAM TIGR03786 strep_pil_rpt: streptococcal pilin isopeptide linkage domain 793 857 2.7E-20 T 22-04-2016 IPR022464 Streptococcal pilin isopeptide linker SII_RS00580 61674dd2aaebe817046400183e8fd131 1922 TIGRFAM TIGR03786 strep_pil_rpt: streptococcal pilin isopeptide linkage domain 549 622 1.6E-16 T 22-04-2016 IPR022464 Streptococcal pilin isopeptide linker SII_RS00580 61674dd2aaebe817046400183e8fd131 1922 TIGRFAM TIGR03786 strep_pil_rpt: streptococcal pilin isopeptide linkage domain 1822 1886 1.3E-21 T 22-04-2016 IPR022464 Streptococcal pilin isopeptide linker SII_RS00580 61674dd2aaebe817046400183e8fd131 1922 TIGRFAM TIGR03786 strep_pil_rpt: streptococcal pilin isopeptide linkage domain 1369 1433 1.1E-22 T 22-04-2016 IPR022464 Streptococcal pilin isopeptide linker SII_RS00580 61674dd2aaebe817046400183e8fd131 1922 TIGRFAM TIGR03786 strep_pil_rpt: streptococcal pilin isopeptide linkage domain 1143 1207 1.4E-22 T 22-04-2016 IPR022464 Streptococcal pilin isopeptide linker SII_RS00580 61674dd2aaebe817046400183e8fd131 1922 TIGRFAM TIGR03786 strep_pil_rpt: streptococcal pilin isopeptide linkage domain 1020 1093 1.5E-18 T 22-04-2016 IPR022464 Streptococcal pilin isopeptide linker SII_RS00580 61674dd2aaebe817046400183e8fd131 1922 TIGRFAM TIGR03786 strep_pil_rpt: streptococcal pilin isopeptide linkage domain 1709 1773 4.3E-22 T 22-04-2016 IPR022464 Streptococcal pilin isopeptide linker SII_RS00580 61674dd2aaebe817046400183e8fd131 1922 TIGRFAM TIGR03786 strep_pil_rpt: streptococcal pilin isopeptide linkage domain 1482 1546 5.8E-22 T 22-04-2016 IPR022464 Streptococcal pilin isopeptide linker SII_RS00580 61674dd2aaebe817046400183e8fd131 1922 TIGRFAM TIGR03786 strep_pil_rpt: streptococcal pilin isopeptide linkage domain 1256 1319 1.5E-21 T 22-04-2016 IPR022464 Streptococcal pilin isopeptide linker SII_RS00580 61674dd2aaebe817046400183e8fd131 1922 TIGRFAM TIGR03786 strep_pil_rpt: streptococcal pilin isopeptide linkage domain 674 743 3.4E-17 T 22-04-2016 IPR022464 Streptococcal pilin isopeptide linker SII_RS00580 61674dd2aaebe817046400183e8fd131 1922 TIGRFAM TIGR03786 strep_pil_rpt: streptococcal pilin isopeptide linkage domain 1596 1660 7.2E-23 T 22-04-2016 IPR022464 Streptococcal pilin isopeptide linker SII_RS00580 61674dd2aaebe817046400183e8fd131 1922 Pfam PF12892 T surface-antigen of pili 1031 1123 6.1E-17 T 22-04-2016 IPR022464 Streptococcal pilin isopeptide linker SII_RS00580 61674dd2aaebe817046400183e8fd131 1922 Pfam PF12892 T surface-antigen of pili 1720 1803 2.9E-18 T 22-04-2016 IPR022464 Streptococcal pilin isopeptide linker SII_RS00580 61674dd2aaebe817046400183e8fd131 1922 Pfam PF12892 T surface-antigen of pili 1267 1348 1.1E-19 T 22-04-2016 IPR022464 Streptococcal pilin isopeptide linker SII_RS00580 61674dd2aaebe817046400183e8fd131 1922 Pfam PF12892 T surface-antigen of pili 560 653 1.8E-13 T 22-04-2016 IPR022464 Streptococcal pilin isopeptide linker SII_RS00580 61674dd2aaebe817046400183e8fd131 1922 Pfam PF12892 T surface-antigen of pili 1154 1236 1.3E-18 T 22-04-2016 IPR022464 Streptococcal pilin isopeptide linker SII_RS00580 61674dd2aaebe817046400183e8fd131 1922 Pfam PF12892 T surface-antigen of pili 1493 1576 6.2E-19 T 22-04-2016 IPR022464 Streptococcal pilin isopeptide linker SII_RS00580 61674dd2aaebe817046400183e8fd131 1922 Pfam PF12892 T surface-antigen of pili 1607 1690 9.1E-21 T 22-04-2016 IPR022464 Streptococcal pilin isopeptide linker SII_RS00580 61674dd2aaebe817046400183e8fd131 1922 Pfam PF12892 T surface-antigen of pili 1833 1888 6.4E-12 T 22-04-2016 IPR022464 Streptococcal pilin isopeptide linker SII_RS00580 61674dd2aaebe817046400183e8fd131 1922 Pfam PF12892 T surface-antigen of pili 685 773 2.2E-16 T 22-04-2016 IPR022464 Streptococcal pilin isopeptide linker SII_RS00580 61674dd2aaebe817046400183e8fd131 1922 Pfam PF12892 T surface-antigen of pili 918 999 1.4E-18 T 22-04-2016 IPR022464 Streptococcal pilin isopeptide linker SII_RS00580 61674dd2aaebe817046400183e8fd131 1922 Pfam PF12892 T surface-antigen of pili 804 887 1.7E-18 T 22-04-2016 IPR022464 Streptococcal pilin isopeptide linker SII_RS00580 61674dd2aaebe817046400183e8fd131 1922 Pfam PF12892 T surface-antigen of pili 1380 1462 1.2E-21 T 22-04-2016 IPR022464 Streptococcal pilin isopeptide linker SII_RS00580 61674dd2aaebe817046400183e8fd131 1922 Pfam PF12892 T surface-antigen of pili 491 529 0.18 T 22-04-2016 IPR022464 Streptococcal pilin isopeptide linker SII_RS00580 61674dd2aaebe817046400183e8fd131 1922 Gene3D G3DSA:2.60.40.1280 114 282 2.8E-39 T 22-04-2016 IPR011252 Fibrogen-binding domain 1 GO:0005618|GO:0007155 SII_RS00580 61674dd2aaebe817046400183e8fd131 1922 SUPERFAMILY SSF49401 116 248 3.73E-28 T 22-04-2016 IPR008966 Adhesion domain SII_RS00580 61674dd2aaebe817046400183e8fd131 1922 Pfam PF05738 Cna protein B-type domain 424 480 9.0E-16 T 22-04-2016 IPR008454 Collagen-binding surface protein Cna-like, B-type domain SII_RS00580 61674dd2aaebe817046400183e8fd131 1922 SUPERFAMILY SSF49478 418 482 1.88E-8 T 22-04-2016 SII_RS00580 61674dd2aaebe817046400183e8fd131 1922 SUPERFAMILY SSF49401 258 387 7.58E-13 T 22-04-2016 IPR008966 Adhesion domain SII_RS00580 61674dd2aaebe817046400183e8fd131 1922 Pfam PF00746 Gram positive anchor 1886 1921 3.0E-4 T 22-04-2016 IPR019948 Gram-positive anchor SII_RS01755 c71247799bf9d626d035e33031587ae6 436 Pfam PF01926 50S ribosome-binding GTPase 6 120 1.1E-26 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 SII_RS01755 c71247799bf9d626d035e33031587ae6 436 Pfam PF01926 50S ribosome-binding GTPase 177 295 1.1E-24 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 SII_RS01755 c71247799bf9d626d035e33031587ae6 436 Hamap MF_00195 GTPase Der [der]. 3 436 40.011 T 22-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 SII_RS01755 c71247799bf9d626d035e33031587ae6 436 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 175 344 8.0E-26 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 SII_RS01755 c71247799bf9d626d035e33031587ae6 436 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 126 3.8E-24 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 SII_RS01755 c71247799bf9d626d035e33031587ae6 436 Gene3D G3DSA:3.30.300.20 358 436 5.2E-37 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta SII_RS01755 c71247799bf9d626d035e33031587ae6 436 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 353 433 1.3E-32 T 22-04-2016 IPR032859 GTPase Der, C-terminal KH-domain-like SII_RS01755 c71247799bf9d626d035e33031587ae6 436 SUPERFAMILY SSF52540 138 435 1.01E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS01755 c71247799bf9d626d035e33031587ae6 436 PIRSF PIRSF006485 2 436 1.4E-168 T 22-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 SII_RS01755 c71247799bf9d626d035e33031587ae6 436 PANTHER PTHR11649:SF5 1 436 4.4E-148 T 22-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 SII_RS01755 c71247799bf9d626d035e33031587ae6 436 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 4 433 1.1E-172 T 22-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 SII_RS01755 c71247799bf9d626d035e33031587ae6 436 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 6 26 6.4E-6 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 SII_RS01755 c71247799bf9d626d035e33031587ae6 436 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 73 91 6.4E-6 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 SII_RS01755 c71247799bf9d626d035e33031587ae6 436 Gene3D G3DSA:3.40.50.300 3 171 3.8E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS01755 c71247799bf9d626d035e33031587ae6 436 Gene3D G3DSA:3.40.50.300 172 357 2.7E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS01755 c71247799bf9d626d035e33031587ae6 436 SUPERFAMILY SSF52540 4 168 2.34E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS01755 c71247799bf9d626d035e33031587ae6 436 PANTHER PTHR11649 1 436 4.4E-148 T 22-04-2016 SII_RS01800 ee4699dfa2d22a06a981263a06c9958d 305 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 58 246 2.9E-43 T 22-04-2016 IPR028055 Membrane insertase YidC/Oxa1, C-terminal SII_RS01800 ee4699dfa2d22a06a981263a06c9958d 305 Pfam PF02096 60Kd inner membrane protein 58 246 1.1E-40 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 SII_RS01800 ee4699dfa2d22a06a981263a06c9958d 305 PANTHER PTHR12428:SF20 4 305 3.3E-97 T 22-04-2016 SII_RS01800 ee4699dfa2d22a06a981263a06c9958d 305 Hamap MF_01811 Membrane protein insertase YidC [yidC]. 2 250 28.17 T 22-04-2016 IPR023060 Membrane insertase YidC/YidC1/YidC2, Firmicutes SII_RS01800 ee4699dfa2d22a06a981263a06c9958d 305 PANTHER PTHR12428 4 305 3.3E-97 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 SII_RS06675 e5fb1796e8e3dd113dd778dbdfd98271 466 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 287 463 2.4E-47 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 SII_RS06675 e5fb1796e8e3dd113dd778dbdfd98271 466 SUPERFAMILY SSF56784 6 265 5.13E-60 T 22-04-2016 IPR023214 HAD-like domain SII_RS06675 e5fb1796e8e3dd113dd778dbdfd98271 466 PANTHER PTHR11071:SF282 216 386 3.3E-93 T 22-04-2016 SII_RS06675 e5fb1796e8e3dd113dd778dbdfd98271 466 PANTHER PTHR11071:SF282 411 464 3.3E-93 T 22-04-2016 SII_RS06675 e5fb1796e8e3dd113dd778dbdfd98271 466 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 367 382 1.6E-19 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 SII_RS06675 e5fb1796e8e3dd113dd778dbdfd98271 466 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 325 337 1.6E-19 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 SII_RS06675 e5fb1796e8e3dd113dd778dbdfd98271 466 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 299 314 1.6E-19 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 SII_RS06675 e5fb1796e8e3dd113dd778dbdfd98271 466 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 14 234 2.3E-17 T 22-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 SII_RS06675 e5fb1796e8e3dd113dd778dbdfd98271 466 Pfam PF08282 haloacid dehalogenase-like hydrolase 15 261 2.3E-50 T 22-04-2016 IPR023214 HAD-like domain SII_RS06675 e5fb1796e8e3dd113dd778dbdfd98271 466 Gene3D G3DSA:3.40.50.1000 170 268 4.4E-46 T 22-04-2016 IPR023214 HAD-like domain SII_RS06675 e5fb1796e8e3dd113dd778dbdfd98271 466 Gene3D G3DSA:3.40.50.1000 5 82 4.4E-46 T 22-04-2016 IPR023214 HAD-like domain SII_RS06675 e5fb1796e8e3dd113dd778dbdfd98271 466 PANTHER PTHR11071 216 386 3.3E-93 T 22-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 SII_RS06675 e5fb1796e8e3dd113dd778dbdfd98271 466 PANTHER PTHR11071 411 464 3.3E-93 T 22-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 SII_RS06675 e5fb1796e8e3dd113dd778dbdfd98271 466 Gene3D G3DSA:2.40.100.10 274 464 2.1E-69 T 22-04-2016 IPR029000 Cyclophilin-like domain SII_RS06675 e5fb1796e8e3dd113dd778dbdfd98271 466 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 14 261 1.1E-49 T 22-04-2016 IPR000150 Cof protein GO:0016787 SII_RS06675 e5fb1796e8e3dd113dd778dbdfd98271 466 SUPERFAMILY SSF50891 280 385 2.63E-57 T 22-04-2016 IPR029000 Cyclophilin-like domain SII_RS06675 e5fb1796e8e3dd113dd778dbdfd98271 466 SUPERFAMILY SSF50891 413 463 2.63E-57 T 22-04-2016 IPR029000 Cyclophilin-like domain SII_RS05190 e4948f9b0d30ab80f868383089d899f4 543 PANTHER PTHR11061 2 455 2.3E-157 T 22-04-2016 SII_RS05190 e4948f9b0d30ab80f868383089d899f4 543 Gene3D G3DSA:2.40.50.140 1 70 2.9E-19 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SII_RS05190 e4948f9b0d30ab80f868383089d899f4 543 SUPERFAMILY SSF53335 73 450 2.84E-74 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SII_RS05190 e4948f9b0d30ab80f868383089d899f4 543 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 381 412 - T 22-04-2016 IPR030390 RNA methyltransferase TrmA, active site SII_RS05190 e4948f9b0d30ab80f868383089d899f4 543 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 433 443 - T 22-04-2016 IPR030391 RNA methyltransferase TrmA, conserved site SII_RS05190 e4948f9b0d30ab80f868383089d899f4 543 Gene3D G3DSA:3.40.50.150 244 449 4.0E-66 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SII_RS05190 e4948f9b0d30ab80f868383089d899f4 543 SUPERFAMILY SSF50249 2 58 2.0E-12 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SII_RS05190 e4948f9b0d30ab80f868383089d899f4 543 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 250 450 8.5E-25 T 22-04-2016 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 SII_RS05190 e4948f9b0d30ab80f868383089d899f4 543 PANTHER PTHR11061:SF30 2 455 2.3E-157 T 22-04-2016 SII_RS05190 e4948f9b0d30ab80f868383089d899f4 543 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 15 443 4.1E-129 T 22-04-2016 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 SII_RS04850 0ebcd54b13be953aa6a6f040bfe20e7d 348 Gene3D G3DSA:3.40.50.720 3 193 8.2E-58 T 22-04-2016 IPR016040 NAD(P)-binding domain SII_RS04850 0ebcd54b13be953aa6a6f040bfe20e7d 348 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 7 330 4.2E-134 T 22-04-2016 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 SII_RS04850 0ebcd54b13be953aa6a6f040bfe20e7d 348 Gene3D G3DSA:3.90.25.10 194 333 6.9E-49 T 22-04-2016 SII_RS04850 0ebcd54b13be953aa6a6f040bfe20e7d 348 PANTHER PTHR10366 6 345 1.5E-193 T 22-04-2016 SII_RS04850 0ebcd54b13be953aa6a6f040bfe20e7d 348 SUPERFAMILY SSF51735 5 336 1.01E-93 T 22-04-2016 IPR016040 NAD(P)-binding domain SII_RS04850 0ebcd54b13be953aa6a6f040bfe20e7d 348 Pfam PF16363 GDP-mannose 4,6 dehydratase 9 318 2.6E-74 T 22-04-2016 IPR016040 NAD(P)-binding domain SII_RS04850 0ebcd54b13be953aa6a6f040bfe20e7d 348 PANTHER PTHR10366:SF437 6 345 1.5E-193 T 22-04-2016 SII_RS07150 42ed65aa4eeb48da5ccb286af3af0971 146 SUPERFAMILY SSF52540 20 115 4.33E-19 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS07150 42ed65aa4eeb48da5ccb286af3af0971 146 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 4 131 9.1E-36 T 22-04-2016 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 SII_RS07150 42ed65aa4eeb48da5ccb286af3af0971 146 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 4 126 1.7E-34 T 22-04-2016 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 SII_RS07150 42ed65aa4eeb48da5ccb286af3af0971 146 PANTHER PTHR33540 1 128 3.8E-43 T 22-04-2016 SII_RS07150 42ed65aa4eeb48da5ccb286af3af0971 146 Gene3D G3DSA:3.40.50.300 3 143 3.5E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS07880 f1dbd222e2b9200f39643bf54ea62b0c 538 SUPERFAMILY SSF90123 4 307 3.66E-41 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SII_RS07880 f1dbd222e2b9200f39643bf54ea62b0c 538 PANTHER PTHR24221 3 489 1.3E-38 T 22-04-2016 SII_RS07880 f1dbd222e2b9200f39643bf54ea62b0c 538 SMART SM00382 354 537 5.8E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain SII_RS07880 f1dbd222e2b9200f39643bf54ea62b0c 538 SUPERFAMILY SSF52540 324 518 9.71E-30 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS07880 f1dbd222e2b9200f39643bf54ea62b0c 538 PANTHER PTHR24221:SF161 3 489 1.3E-38 T 22-04-2016 SII_RS07880 f1dbd222e2b9200f39643bf54ea62b0c 538 ProSitePatterns PS00211 ABC transporters family signature. 459 473 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SII_RS07880 f1dbd222e2b9200f39643bf54ea62b0c 538 Gene3D G3DSA:1.20.1560.10 4 307 1.7E-37 T 22-04-2016 SII_RS07880 f1dbd222e2b9200f39643bf54ea62b0c 538 Gene3D G3DSA:3.40.50.300 330 526 1.0E-29 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS07880 f1dbd222e2b9200f39643bf54ea62b0c 538 Pfam PF00005 ABC transporter 346 485 2.7E-20 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SII_RS07880 f1dbd222e2b9200f39643bf54ea62b0c 538 Pfam PF00664 ABC transporter transmembrane region 14 281 5.5E-22 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SII_RS02530 f9dad0928f925405eae8ef1dc1a8d83e 348 PANTHER PTHR11538 98 348 2.3E-109 T 22-04-2016 SII_RS02530 f9dad0928f925405eae8ef1dc1a8d83e 348 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 12 347 45.795 T 22-04-2016 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 SII_RS02530 f9dad0928f925405eae8ef1dc1a8d83e 348 SUPERFAMILY SSF46589 23 105 1.05E-17 T 22-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 SII_RS02530 f9dad0928f925405eae8ef1dc1a8d83e 348 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 44 348 1.3E-105 T 22-04-2016 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 SII_RS02530 f9dad0928f925405eae8ef1dc1a8d83e 348 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 26 93 2.5E-19 T 22-04-2016 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 SII_RS02530 f9dad0928f925405eae8ef1dc1a8d83e 348 Pfam PF01409 tRNA synthetases class II core domain (F) 98 347 4.5E-107 T 22-04-2016 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 SII_RS02530 f9dad0928f925405eae8ef1dc1a8d83e 348 Gene3D G3DSA:3.30.930.10 23 348 3.5E-129 T 22-04-2016 SII_RS02530 f9dad0928f925405eae8ef1dc1a8d83e 348 SUPERFAMILY SSF55681 98 348 4.77E-83 T 22-04-2016 SII_RS00420 be48f5ae267f6d83a31e9d1381610816 166 SUPERFAMILY SSF63817 1 114 2.09E-33 T 22-04-2016 IPR023365 Sortase domain SII_RS00420 be48f5ae267f6d83a31e9d1381610816 166 TIGRFAM TIGR01076 sortase_fam: sortase 1 117 5.9E-39 T 22-04-2016 IPR005754 Sortase family SII_RS00420 be48f5ae267f6d83a31e9d1381610816 166 Gene3D G3DSA:2.40.260.10 1 114 3.3E-37 T 22-04-2016 IPR023365 Sortase domain SII_RS00420 be48f5ae267f6d83a31e9d1381610816 166 Pfam PF04203 Sortase family 2 113 3.7E-18 T 22-04-2016 IPR005754 Sortase family SII_RS00420 be48f5ae267f6d83a31e9d1381610816 166 PANTHER PTHR33393:SF5 7 125 7.9E-16 T 22-04-2016 SII_RS00420 be48f5ae267f6d83a31e9d1381610816 166 PANTHER PTHR33393 7 125 7.9E-16 T 22-04-2016 SII_RS04755 4451fda04922168865c78f923ad7038d 209 SUPERFAMILY SSF46785 2 66 1.71E-12 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SII_RS04755 4451fda04922168865c78f923ad7038d 209 Pfam PF08279 HTH domain 6 57 5.4E-10 T 22-04-2016 IPR013196 Helix-turn-helix, type 11 SII_RS04755 4451fda04922168865c78f923ad7038d 209 SMART SM00116 83 131 0.068 T 22-04-2016 IPR000644 CBS domain SII_RS04755 4451fda04922168865c78f923ad7038d 209 SMART SM00116 149 199 3.0E-4 T 22-04-2016 IPR000644 CBS domain SII_RS04755 4451fda04922168865c78f923ad7038d 209 PIRSF PIRSF026546 1 205 1.3E-74 T 22-04-2016 IPR016842 Protein of unknown function UCP026546, HtH-CBS SII_RS04755 4451fda04922168865c78f923ad7038d 209 PANTHER PTHR11911:SF55 76 208 5.5E-30 T 22-04-2016 SII_RS04755 4451fda04922168865c78f923ad7038d 209 SUPERFAMILY SSF54631 76 202 3.98E-25 T 22-04-2016 SII_RS04755 4451fda04922168865c78f923ad7038d 209 SMART SM00420 6 51 0.0059 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 SII_RS04755 4451fda04922168865c78f923ad7038d 209 Gene3D G3DSA:1.10.10.10 2 61 6.0E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SII_RS04755 4451fda04922168865c78f923ad7038d 209 Pfam PF00571 CBS domain 77 130 2.0E-7 T 22-04-2016 IPR000644 CBS domain SII_RS04755 4451fda04922168865c78f923ad7038d 209 Pfam PF00571 CBS domain 144 198 2.1E-7 T 22-04-2016 IPR000644 CBS domain SII_RS04755 4451fda04922168865c78f923ad7038d 209 Gene3D G3DSA:3.10.580.10 74 204 1.1E-22 T 22-04-2016 SII_RS04755 4451fda04922168865c78f923ad7038d 209 PANTHER PTHR11911 76 208 5.5E-30 T 22-04-2016 SII_RS07940 b0aa5b59a7c9c871b3b7b5249317d542 242 PANTHER PTHR12029 2 242 6.8E-82 T 22-04-2016 SII_RS07940 b0aa5b59a7c9c871b3b7b5249317d542 242 SUPERFAMILY SSF75217 76 242 2.41E-49 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases SII_RS07940 b0aa5b59a7c9c871b3b7b5249317d542 242 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 5 241 8.4E-79 T 22-04-2016 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 SII_RS07940 b0aa5b59a7c9c871b3b7b5249317d542 242 Pfam PF00588 SpoU rRNA Methylase family 96 235 3.3E-41 T 22-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 SII_RS07940 b0aa5b59a7c9c871b3b7b5249317d542 242 SMART SM00967 6 80 4.2E-16 T 22-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 SII_RS07940 b0aa5b59a7c9c871b3b7b5249317d542 242 Gene3D G3DSA:3.40.1280.10 90 241 8.2E-52 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal SII_RS07940 b0aa5b59a7c9c871b3b7b5249317d542 242 SUPERFAMILY SSF55315 1 76 7.4E-19 T 22-04-2016 IPR029064 50S ribosomal protein L30e-like SII_RS07940 b0aa5b59a7c9c871b3b7b5249317d542 242 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 6 79 1.7E-16 T 22-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 SII_RS07940 b0aa5b59a7c9c871b3b7b5249317d542 242 Gene3D G3DSA:3.30.1330.30 1 75 3.5E-23 T 22-04-2016 IPR029064 50S ribosomal protein L30e-like SII_RS00070 8d0cd921d588c180d48f76d118ee86b3 920 PANTHER PTHR10628 477 763 2.0E-129 T 22-04-2016 IPR026856 Sialidase family GO:0004308 KEGG: 00511+3.2.1.18|KEGG: 00600+3.2.1.18 SII_RS00070 8d0cd921d588c180d48f76d118ee86b3 920 PANTHER PTHR10628 239 395 2.0E-129 T 22-04-2016 IPR026856 Sialidase family GO:0004308 KEGG: 00511+3.2.1.18|KEGG: 00600+3.2.1.18 SII_RS00070 8d0cd921d588c180d48f76d118ee86b3 920 PANTHER PTHR10628:SF5 477 763 2.0E-129 T 22-04-2016 SII_RS00070 8d0cd921d588c180d48f76d118ee86b3 920 PANTHER PTHR10628:SF5 239 395 2.0E-129 T 22-04-2016 SII_RS00070 8d0cd921d588c180d48f76d118ee86b3 920 Pfam PF13088 BNR repeat-like domain 500 724 2.4E-20 T 22-04-2016 IPR011040 Sialidases SII_RS00070 8d0cd921d588c180d48f76d118ee86b3 920 Gene3D G3DSA:2.60.120.200 82 270 1.7E-48 T 22-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain SII_RS00070 8d0cd921d588c180d48f76d118ee86b3 920 Gene3D G3DSA:2.120.10.10 495 751 2.4E-87 T 22-04-2016 IPR011040 Sialidases SII_RS00070 8d0cd921d588c180d48f76d118ee86b3 920 Gene3D G3DSA:2.120.10.10 286 412 2.4E-87 T 22-04-2016 IPR011040 Sialidases SII_RS00070 8d0cd921d588c180d48f76d118ee86b3 920 TIGRFAM TIGR01167 LPXTG_anchor: LPXTG cell wall anchor domain 888 919 3.2E-4 T 22-04-2016 IPR019931 LPXTG cell wall anchor domain SII_RS00070 8d0cd921d588c180d48f76d118ee86b3 920 SUPERFAMILY SSF50939 494 751 8.41E-82 T 22-04-2016 IPR011040 Sialidases SII_RS00070 8d0cd921d588c180d48f76d118ee86b3 920 SUPERFAMILY SSF50939 289 412 8.41E-82 T 22-04-2016 IPR011040 Sialidases SII_RS00070 8d0cd921d588c180d48f76d118ee86b3 920 Pfam PF02973 Sialidase, N-terminal domain 81 271 1.2E-69 T 22-04-2016 IPR004124 Glycoside hydrolase, family 33, N-terminal GO:0004308|GO:0005975 KEGG: 00511+3.2.1.18|KEGG: 00600+3.2.1.18 SII_RS00070 8d0cd921d588c180d48f76d118ee86b3 920 SUPERFAMILY SSF49899 92 265 5.12E-24 T 22-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain SII_RS09450 fcb6854b266644c4cca10a55533f90a6 270 PANTHER PTHR34475 1 173 5.1E-32 T 22-04-2016 SII_RS09450 fcb6854b266644c4cca10a55533f90a6 270 Gene3D G3DSA:1.10.260.40 5 78 3.8E-5 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SII_RS09450 fcb6854b266644c4cca10a55533f90a6 270 PANTHER PTHR34475:SF1 1 173 5.1E-32 T 22-04-2016 SII_RS09450 fcb6854b266644c4cca10a55533f90a6 270 Pfam PF13413 Helix-turn-helix domain 10 67 3.2E-19 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SII_RS09275 6bbb6bfa2e14b6eec7ef99adc8da6608 79 Gene3D G3DSA:1.10.1200.10 1 76 1.2E-24 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain SII_RS09275 6bbb6bfa2e14b6eec7ef99adc8da6608 79 SUPERFAMILY SSF47336 4 78 3.27E-14 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain SII_RS09275 6bbb6bfa2e14b6eec7ef99adc8da6608 79 TIGRFAM TIGR01688 dltC: D-alanine--poly(phosphoribitol) ligase, subunit 2 4 73 2.9E-23 T 22-04-2016 IPR003230 D-alanine--poly(phosphoribitol) ligase subunit 2 GO:0019350|GO:0036370 KEGG: 00473+6.1.1.13|UniPathway: UPA00556 SII_RS09275 6bbb6bfa2e14b6eec7ef99adc8da6608 79 Hamap MF_00565 D-alanine--poly(phosphoribitol) ligase subunit 2 [dltC]. 1 77 50.039 T 22-04-2016 IPR003230 D-alanine--poly(phosphoribitol) ligase subunit 2 GO:0019350|GO:0036370 KEGG: 00473+6.1.1.13|UniPathway: UPA00556 SII_RS09275 6bbb6bfa2e14b6eec7ef99adc8da6608 79 Pfam PF00550 Phosphopantetheine attachment site 6 71 1.1E-11 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain SII_RS09275 6bbb6bfa2e14b6eec7ef99adc8da6608 79 PANTHER PTHR41270 2 77 2.9E-32 T 22-04-2016 SII_RS09275 6bbb6bfa2e14b6eec7ef99adc8da6608 79 PANTHER PTHR41270:SF1 2 77 2.9E-32 T 22-04-2016 SII_RS01670 5d4102c9de5a3123aeaaf1f4828d9d48 133 SUPERFAMILY SSF53448 5 130 2.0E-18 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SII_RS01670 5d4102c9de5a3123aeaaf1f4828d9d48 133 Gene3D G3DSA:3.90.550.10 5 120 4.0E-20 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SII_RS01670 5d4102c9de5a3123aeaaf1f4828d9d48 133 Pfam PF01501 Glycosyl transferase family 8 6 116 3.3E-11 T 22-04-2016 IPR002495 Glycosyl transferase, family 8 GO:0016757 SII_RS01625 3d9f1509d7af42d3f4e9b3c005764289 181 Pfam PF07155 ECF-type riboflavin transporter, S component 3 170 4.4E-56 T 22-04-2016 IPR009825 ECF transporter, substrate-specific component-like GO:0016020 SII_RS01625 3d9f1509d7af42d3f4e9b3c005764289 181 PANTHER PTHR37815 1 181 1.3E-92 T 22-04-2016 SII_RS01625 3d9f1509d7af42d3f4e9b3c005764289 181 PANTHER PTHR37815:SF2 1 181 1.3E-92 T 22-04-2016 SII_RS01625 3d9f1509d7af42d3f4e9b3c005764289 181 Hamap MF_01572 UPF0397 protein . 2 181 28.432 T 22-04-2016 IPR022914 Protein of unknown function UPF0397 SII_RS07605 f56eaca305a42aa2de394acb68d337f9 658 Gene3D G3DSA:3.90.76.10 42 210 6.2E-40 T 22-04-2016 SII_RS07605 f56eaca305a42aa2de394acb68d337f9 658 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 76 522 5.9E-48 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain SII_RS07605 f56eaca305a42aa2de394acb68d337f9 658 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 81 103 - T 22-04-2016 IPR023765 Solute-binding protein family 5, conserved site SII_RS07605 f56eaca305a42aa2de394acb68d337f9 658 PANTHER PTHR30290 405 633 1.1E-127 T 22-04-2016 SII_RS07605 f56eaca305a42aa2de394acb68d337f9 658 PANTHER PTHR30290 1 312 1.1E-127 T 22-04-2016 SII_RS07605 f56eaca305a42aa2de394acb68d337f9 658 PANTHER PTHR30290 331 389 1.1E-127 T 22-04-2016 SII_RS07605 f56eaca305a42aa2de394acb68d337f9 658 Gene3D G3DSA:3.40.190.10 211 340 1.7E-16 T 22-04-2016 SII_RS07605 f56eaca305a42aa2de394acb68d337f9 658 PANTHER PTHR30290:SF10 405 633 1.1E-127 T 22-04-2016 SII_RS07605 f56eaca305a42aa2de394acb68d337f9 658 PANTHER PTHR30290:SF10 1 312 1.1E-127 T 22-04-2016 SII_RS07605 f56eaca305a42aa2de394acb68d337f9 658 PANTHER PTHR30290:SF10 331 389 1.1E-127 T 22-04-2016 SII_RS07605 f56eaca305a42aa2de394acb68d337f9 658 PIRSF PIRSF002741 3 618 1.3E-46 T 22-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 SII_RS07605 f56eaca305a42aa2de394acb68d337f9 658 SUPERFAMILY SSF53850 37 588 1.21E-77 T 22-04-2016 SII_RS07605 f56eaca305a42aa2de394acb68d337f9 658 Gene3D G3DSA:3.10.105.10 341 584 2.2E-34 T 22-04-2016 SII_RS06500 a84b6428f037f8662b57ff023f371226 126 Gene3D G3DSA:3.40.250.10 16 121 3.7E-22 T 22-04-2016 IPR001763 Rhodanese-like domain SII_RS06500 a84b6428f037f8662b57ff023f371226 126 Pfam PF00581 Rhodanese-like domain 35 121 2.1E-14 T 22-04-2016 IPR001763 Rhodanese-like domain SII_RS06500 a84b6428f037f8662b57ff023f371226 126 SUPERFAMILY SSF52821 11 121 4.71E-24 T 22-04-2016 IPR001763 Rhodanese-like domain SII_RS06500 a84b6428f037f8662b57ff023f371226 126 SMART SM00450 29 125 9.3E-12 T 22-04-2016 IPR001763 Rhodanese-like domain SII_RS03175 acef7cbff2ddadfe89b29893c32aa27a 195 Pfam PF02517 CAAX protease self-immunity 103 187 9.4E-14 T 22-04-2016 IPR003675 CAAX amino terminal protease GO:0016020 SII_RS06825 7f2ece228be2f2d2f9847f74e7a7a430 269 PANTHER PTHR30614:SF16 1 256 2.4E-69 T 22-04-2016 SII_RS06825 7f2ece228be2f2d2f9847f74e7a7a430 269 PANTHER PTHR30614 1 256 2.4E-69 T 22-04-2016 SII_RS06825 7f2ece228be2f2d2f9847f74e7a7a430 269 SUPERFAMILY SSF161098 36 242 2.09E-36 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SII_RS06825 7f2ece228be2f2d2f9847f74e7a7a430 269 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 56 251 3.1E-18 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SII_RS06825 7f2ece228be2f2d2f9847f74e7a7a430 269 Gene3D G3DSA:1.10.3720.10 36 250 1.6E-37 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SII_RS06825 7f2ece228be2f2d2f9847f74e7a7a430 269 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 36 145 1.5E-15 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 SII_RS00190 a20b67615ddfb201cfd1d73f7347edc9 166 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 13 161 6.0E-20 T 22-04-2016 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 SII_RS00190 a20b67615ddfb201cfd1d73f7347edc9 166 Pfam PF04093 rod shape-determining protein MreD 13 165 1.5E-23 T 22-04-2016 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 SII_RS06555 c91da8c9bee1780f12814ecacda81715 221 PANTHER PTHR11907:SF9 31 221 3.7E-41 T 22-04-2016 SII_RS06555 c91da8c9bee1780f12814ecacda81715 221 Gene3D G3DSA:3.40.50.2020 78 217 8.5E-18 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like SII_RS06555 c91da8c9bee1780f12814ecacda81715 221 PANTHER PTHR11907 31 221 3.7E-41 T 22-04-2016 SII_RS06555 c91da8c9bee1780f12814ecacda81715 221 SUPERFAMILY SSF53271 82 220 3.45E-20 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like SII_RS09305 2bb0117d17ac00fb2c20ed24e8c6b5e5 206 SUPERFAMILY SSF56784 4 205 7.25E-39 T 22-04-2016 IPR023214 HAD-like domain SII_RS09305 2bb0117d17ac00fb2c20ed24e8c6b5e5 206 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 7 173 5.5E-10 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SII_RS09305 2bb0117d17ac00fb2c20ed24e8c6b5e5 206 Pfam PF13419 Haloacid dehalogenase-like hydrolase 8 173 1.2E-21 T 22-04-2016 IPR023214 HAD-like domain SII_RS09305 2bb0117d17ac00fb2c20ed24e8c6b5e5 206 PANTHER PTHR12725:SF57 1 206 1.5E-32 T 22-04-2016 SII_RS09305 2bb0117d17ac00fb2c20ed24e8c6b5e5 206 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 7 167 4.2E-10 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SII_RS09305 2bb0117d17ac00fb2c20ed24e8c6b5e5 206 Gene3D G3DSA:3.40.50.1000 74 205 1.0E-35 T 22-04-2016 IPR023214 HAD-like domain SII_RS09305 2bb0117d17ac00fb2c20ed24e8c6b5e5 206 PANTHER PTHR12725 1 206 1.5E-32 T 22-04-2016 SII_RS00815 c6b31f904992931aadc58450988ea516 141 Pfam PF16888 Domain of unknown function (DUF5082) 19 123 7.2E-10 T 22-04-2016 IPR031681 Protein of unknown function DUF5082 SII_RS07160 e31ce54b5b2eff3557758f0e250480c1 199 Pfam PF07099 Protein of unknown function (DUF1361) 32 188 9.4E-37 T 22-04-2016 IPR009793 Protein of unknown function DUF1361 SII_RS07310 a0c3b65d8c2e5d623a2546c47b27f3d3 457 PANTHER PTHR11014 289 456 2.2E-112 T 22-04-2016 SII_RS07310 a0c3b65d8c2e5d623a2546c47b27f3d3 457 PANTHER PTHR11014 1 269 2.2E-112 T 22-04-2016 SII_RS07310 a0c3b65d8c2e5d623a2546c47b27f3d3 457 Gene3D G3DSA:3.30.70.360 212 368 2.8E-51 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain SII_RS07310 a0c3b65d8c2e5d623a2546c47b27f3d3 457 Pfam PF07687 Peptidase dimerisation domain 199 356 1.6E-20 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain SII_RS07310 a0c3b65d8c2e5d623a2546c47b27f3d3 457 Gene3D G3DSA:3.40.630.10 397 456 5.3E-54 T 22-04-2016 SII_RS07310 a0c3b65d8c2e5d623a2546c47b27f3d3 457 Gene3D G3DSA:3.40.630.10 19 211 5.3E-54 T 22-04-2016 SII_RS07310 a0c3b65d8c2e5d623a2546c47b27f3d3 457 SUPERFAMILY SSF53187 371 456 3.01E-48 T 22-04-2016 SII_RS07310 a0c3b65d8c2e5d623a2546c47b27f3d3 457 SUPERFAMILY SSF53187 17 201 3.01E-48 T 22-04-2016 SII_RS07310 a0c3b65d8c2e5d623a2546c47b27f3d3 457 Pfam PF01546 Peptidase family M20/M25/M40 86 454 2.2E-31 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 SII_RS07310 a0c3b65d8c2e5d623a2546c47b27f3d3 457 PANTHER PTHR11014:SF15 289 456 2.2E-112 T 22-04-2016 SII_RS07310 a0c3b65d8c2e5d623a2546c47b27f3d3 457 PANTHER PTHR11014:SF15 1 269 2.2E-112 T 22-04-2016 SII_RS04605 6491212671910189a698c67a6d34e9ce 265 PANTHER PTHR30520:SF5 7 265 1.5E-80 T 22-04-2016 SII_RS04605 6491212671910189a698c67a6d34e9ce 265 PANTHER PTHR30520 7 265 1.5E-80 T 22-04-2016 SII_RS04605 6491212671910189a698c67a6d34e9ce 265 Gene3D G3DSA:1.20.1080.10 23 259 2.1E-49 T 22-04-2016 IPR023271 Aquaporin-like SII_RS04605 6491212671910189a698c67a6d34e9ce 265 Pfam PF01226 Formate/nitrite transporter 19 254 7.3E-44 T 22-04-2016 IPR000292 Formate/nitrite transporter GO:0005215|GO:0006810|GO:0016020 SII_RS04270 b43cdb04d2394ae13eb4216f288e18d9 205 SUPERFAMILY SSF48452 115 204 3.79E-8 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SII_RS04270 b43cdb04d2394ae13eb4216f288e18d9 205 Gene3D G3DSA:1.25.40.10 7 182 5.1E-7 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SII_RS05970 88001943599392d341039a1b1267b133 201 SUPERFAMILY SSF54719 91 200 2.36E-45 T 22-04-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SII_RS05970 88001943599392d341039a1b1267b133 201 Gene3D G3DSA:1.10.287.990 20 89 2.0E-29 T 22-04-2016 SII_RS05970 88001943599392d341039a1b1267b133 201 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 95 195 1.0E-41 T 22-04-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SII_RS05970 88001943599392d341039a1b1267b133 201 SUPERFAMILY SSF46609 4 89 2.62E-35 T 22-04-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SII_RS05970 88001943599392d341039a1b1267b133 201 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 5 88 4.4E-31 T 22-04-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SII_RS05970 88001943599392d341039a1b1267b133 201 PRINTS PR01703 Manganese superoxide dismutase signature 72 85 8.9E-28 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SII_RS05970 88001943599392d341039a1b1267b133 201 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 8.9E-28 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SII_RS05970 88001943599392d341039a1b1267b133 201 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 8.9E-28 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SII_RS05970 88001943599392d341039a1b1267b133 201 PRINTS PR01703 Manganese superoxide dismutase signature 161 173 8.9E-28 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SII_RS05970 88001943599392d341039a1b1267b133 201 PRINTS PR01703 Manganese superoxide dismutase signature 124 132 8.9E-28 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SII_RS05970 88001943599392d341039a1b1267b133 201 PIRSF PIRSF000349 1 201 4.8E-81 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SII_RS05970 88001943599392d341039a1b1267b133 201 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 163 170 - T 22-04-2016 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SII_RS05970 88001943599392d341039a1b1267b133 201 PANTHER PTHR11404 5 201 2.2E-99 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SII_RS09220 173ecdd0e42c0d2b0156967f0e37dc6f 289 PANTHER PTHR37038:SF1 2 289 1.5E-67 T 22-04-2016 SII_RS09220 173ecdd0e42c0d2b0156967f0e37dc6f 289 Gene3D G3DSA:1.10.260.40 1 48 5.5E-5 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SII_RS09220 173ecdd0e42c0d2b0156967f0e37dc6f 289 Pfam PF12844 Helix-turn-helix domain 5 65 2.7E-9 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SII_RS09220 173ecdd0e42c0d2b0156967f0e37dc6f 289 PANTHER PTHR37038 2 289 1.5E-67 T 22-04-2016 SII_RS09220 173ecdd0e42c0d2b0156967f0e37dc6f 289 SUPERFAMILY SSF47413 3 63 1.46E-7 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SII_RS09220 173ecdd0e42c0d2b0156967f0e37dc6f 289 TIGRFAM TIGR01716 RGG_Cterm: transcriptional activator, Rgg/GadR/MutR family, C-terminal domain 63 285 3.7E-42 T 22-04-2016 IPR010057 Transcription activator MutR, C-terminal SII_RS09395 c61ef5abb6a8dca3ddef7cb894391c73 638 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 276 290 - T 22-04-2016 IPR020595 MnmG-related, conserved site SII_RS09395 c61ef5abb6a8dca3ddef7cb894391c73 638 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 7 627 41.237 T 22-04-2016 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 SII_RS09395 c61ef5abb6a8dca3ddef7cb894391c73 638 Pfam PF13932 GidA associated domain 404 619 2.5E-70 T 22-04-2016 IPR026904 GidA associated domain 3 SII_RS09395 c61ef5abb6a8dca3ddef7cb894391c73 638 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 9 624 5.5E-273 T 22-04-2016 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 SII_RS09395 c61ef5abb6a8dca3ddef7cb894391c73 638 SMART SM01228 549 620 4.1E-40 T 22-04-2016 SII_RS09395 c61ef5abb6a8dca3ddef7cb894391c73 638 SUPERFAMILY SSF51905 7 68 1.08E-41 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SII_RS09395 c61ef5abb6a8dca3ddef7cb894391c73 638 SUPERFAMILY SSF51905 99 262 1.08E-41 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SII_RS09395 c61ef5abb6a8dca3ddef7cb894391c73 638 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 371 394 - T 22-04-2016 IPR020595 MnmG-related, conserved site SII_RS09395 c61ef5abb6a8dca3ddef7cb894391c73 638 PANTHER PTHR11806 4 634 0.0 T 22-04-2016 SII_RS09395 c61ef5abb6a8dca3ddef7cb894391c73 638 PANTHER PTHR11806:SF0 4 634 0.0 T 22-04-2016 SII_RS09395 c61ef5abb6a8dca3ddef7cb894391c73 638 Pfam PF01134 Glucose inhibited division protein A 10 402 5.4E-164 T 22-04-2016 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 SII_RS09395 c61ef5abb6a8dca3ddef7cb894391c73 638 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 153 162 8.3E-6 T 22-04-2016 SII_RS09395 c61ef5abb6a8dca3ddef7cb894391c73 638 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 10 32 8.3E-6 T 22-04-2016 SII_RS09395 c61ef5abb6a8dca3ddef7cb894391c73 638 Gene3D G3DSA:3.50.50.60 9 229 4.1E-32 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SII_RS05085 11f4d7c51cf841b571d215ad05246d81 443 Pfam PF03432 Relaxase/Mobilisation nuclease domain 10 250 2.2E-45 T 22-04-2016 IPR005094 Endonuclease relaxase, MobA/VirD2 SII_RS00220 d8cd7f2a1d8b19d6b90b5602fb6b0320 81 Pfam PF00550 Phosphopantetheine attachment site 25 74 1.9E-9 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain SII_RS00220 d8cd7f2a1d8b19d6b90b5602fb6b0320 81 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 36 75 5.0E-10 T 22-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 SII_RS00220 d8cd7f2a1d8b19d6b90b5602fb6b0320 81 Gene3D G3DSA:1.10.1200.10 1 80 5.3E-19 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain SII_RS00220 d8cd7f2a1d8b19d6b90b5602fb6b0320 81 SUPERFAMILY SSF47336 1 79 1.02E-14 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain SII_RS00220 d8cd7f2a1d8b19d6b90b5602fb6b0320 81 Hamap MF_01217 Acyl carrier protein [acpP]. 5 78 14.824 T 22-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 SII_RS00185 cff87f1a63a8c11b2eac12bfab14e081 268 PIRSF PIRSF038471 1 268 1.5E-47 T 22-04-2016 IPR007221 Rod shape-determining protein MreC GO:0008360 SII_RS00185 cff87f1a63a8c11b2eac12bfab14e081 268 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 9 266 1.8E-41 T 22-04-2016 IPR007221 Rod shape-determining protein MreC GO:0008360 SII_RS00185 cff87f1a63a8c11b2eac12bfab14e081 268 PANTHER PTHR34138 1 266 5.2E-53 T 22-04-2016 SII_RS00185 cff87f1a63a8c11b2eac12bfab14e081 268 Pfam PF04085 rod shape-determining protein MreC 115 266 6.2E-32 T 22-04-2016 IPR007221 Rod shape-determining protein MreC GO:0008360 SII_RS00185 cff87f1a63a8c11b2eac12bfab14e081 268 PANTHER PTHR34138:SF1 1 266 5.2E-53 T 22-04-2016 SII_RS07145 001dc5b191943710b84f9e7a30720660 173 PANTHER PTHR23091 5 173 6.7E-22 T 22-04-2016 SII_RS07145 001dc5b191943710b84f9e7a30720660 173 Pfam PF00583 Acetyltransferase (GNAT) family 67 146 4.9E-15 T 22-04-2016 IPR000182 GNAT domain GO:0008080 SII_RS07145 001dc5b191943710b84f9e7a30720660 173 Gene3D G3DSA:3.40.630.30 6 171 4.0E-40 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SII_RS07145 001dc5b191943710b84f9e7a30720660 173 SUPERFAMILY SSF55729 6 172 2.19E-29 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SII_RS04840 0a1d87b72423762a347e0457e9a23922 193 Pfam PF08242 Methyltransferase domain 41 134 1.9E-17 T 22-04-2016 IPR013217 Methyltransferase type 12 SII_RS04840 0a1d87b72423762a347e0457e9a23922 193 Gene3D G3DSA:3.40.50.150 25 169 5.6E-30 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SII_RS04840 0a1d87b72423762a347e0457e9a23922 193 PANTHER PTHR10108 1 143 1.0E-21 T 22-04-2016 SII_RS04840 0a1d87b72423762a347e0457e9a23922 193 SUPERFAMILY SSF53335 14 171 2.28E-33 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SII_RS04840 0a1d87b72423762a347e0457e9a23922 193 PANTHER PTHR10108:SF705 1 143 1.0E-21 T 22-04-2016 SII_RS07530 bb9917ae09397ae720b812aeaa6b7999 586 PANTHER PTHR24221 14 586 7.3E-267 T 22-04-2016 SII_RS07530 bb9917ae09397ae720b812aeaa6b7999 586 PANTHER PTHR24221:SF271 14 586 7.3E-267 T 22-04-2016 SII_RS07530 bb9917ae09397ae720b812aeaa6b7999 586 Pfam PF00005 ABC transporter 361 508 1.0E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SII_RS07530 bb9917ae09397ae720b812aeaa6b7999 586 ProSitePatterns PS00211 ABC transporters family signature. 480 494 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SII_RS07530 bb9917ae09397ae720b812aeaa6b7999 586 SUPERFAMILY SSF52540 334 579 3.73E-86 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS07530 bb9917ae09397ae720b812aeaa6b7999 586 SMART SM00382 369 554 2.2E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain SII_RS07530 bb9917ae09397ae720b812aeaa6b7999 586 SUPERFAMILY SSF90123 12 326 1.57E-73 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SII_RS07530 bb9917ae09397ae720b812aeaa6b7999 586 Gene3D G3DSA:1.20.1560.10 12 328 9.0E-75 T 22-04-2016 SII_RS07530 bb9917ae09397ae720b812aeaa6b7999 586 Pfam PF00664 ABC transporter transmembrane region 23 298 3.7E-47 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SII_RS07530 bb9917ae09397ae720b812aeaa6b7999 586 Gene3D G3DSA:3.40.50.300 344 572 1.5E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS01995 1c3df5685b8d6bb0632067ad2aff9997 284 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 259 267 - T 22-04-2016 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 SII_RS01995 1c3df5685b8d6bb0632067ad2aff9997 284 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 123 280 1.2E-70 T 22-04-2016 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 SII_RS01995 1c3df5685b8d6bb0632067ad2aff9997 284 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 4 120 7.8E-41 T 22-04-2016 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 SII_RS01995 1c3df5685b8d6bb0632067ad2aff9997 284 Hamap MF_01576 Bifunctional protein FolD [folD]. 2 282 38.879 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 SII_RS01995 1c3df5685b8d6bb0632067ad2aff9997 284 Gene3D G3DSA:3.40.192.10 6 138 2.3E-50 T 22-04-2016 SII_RS01995 1c3df5685b8d6bb0632067ad2aff9997 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 238 254 1.6E-84 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 SII_RS01995 1c3df5685b8d6bb0632067ad2aff9997 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 203 232 1.6E-84 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 SII_RS01995 1c3df5685b8d6bb0632067ad2aff9997 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 74 101 1.6E-84 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 SII_RS01995 1c3df5685b8d6bb0632067ad2aff9997 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 154 174 1.6E-84 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 SII_RS01995 1c3df5685b8d6bb0632067ad2aff9997 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 33 55 1.6E-84 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 SII_RS01995 1c3df5685b8d6bb0632067ad2aff9997 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 255 273 1.6E-84 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 SII_RS01995 1c3df5685b8d6bb0632067ad2aff9997 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 109 130 1.6E-84 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 SII_RS01995 1c3df5685b8d6bb0632067ad2aff9997 284 PANTHER PTHR10025 1 284 1.6E-162 T 22-04-2016 SII_RS01995 1c3df5685b8d6bb0632067ad2aff9997 284 Gene3D G3DSA:3.40.50.720 139 263 8.2E-53 T 22-04-2016 IPR016040 NAD(P)-binding domain SII_RS01995 1c3df5685b8d6bb0632067ad2aff9997 284 SUPERFAMILY SSF53223 1 121 9.4E-42 T 22-04-2016 SII_RS01995 1c3df5685b8d6bb0632067ad2aff9997 284 ProSitePatterns PS00766 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 1. 75 100 - T 22-04-2016 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 SII_RS01995 1c3df5685b8d6bb0632067ad2aff9997 284 SUPERFAMILY SSF51735 122 280 3.47E-51 T 22-04-2016 IPR016040 NAD(P)-binding domain SII_RS08140 230314a2ffe58a806f1156f1708c59f3 152 Pfam PF00293 NUDIX domain 26 130 1.9E-8 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 SII_RS08140 230314a2ffe58a806f1156f1708c59f3 152 SUPERFAMILY SSF55811 22 149 3.66E-19 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SII_RS08140 230314a2ffe58a806f1156f1708c59f3 152 Gene3D G3DSA:3.90.79.10 22 147 1.3E-17 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SII_RS06045 ca16f05de3c2476f2ca9ca7e178180da 69 Pfam PF04024 PspC domain 3 59 4.9E-23 T 22-04-2016 IPR007168 Phage shock protein, PspC, N-terminal SII_RS06045 ca16f05de3c2476f2ca9ca7e178180da 69 PANTHER PTHR33885 1 59 1.3E-24 T 22-04-2016 SII_RS05915 a43fbdae22308d2c1f54b01c6de39386 71 Gene3D G3DSA:1.20.5.130 29 63 6.4E-4 T 22-04-2016 IPR023388 Bacteriocin class IIa domain SII_RS05915 a43fbdae22308d2c1f54b01c6de39386 71 Pfam PF01721 Class II bacteriocin 30 62 8.9E-6 T 22-04-2016 IPR002633 Bacteriocin, class IIa GO:0005576|GO:0042742 SII_RS01990 80c8fb26aa8e18e592e73f3d02e35aca 430 Pfam PF02687 FtsX-like permease family 296 422 2.7E-15 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 SII_RS01990 80c8fb26aa8e18e592e73f3d02e35aca 430 PANTHER PTHR30489 1 429 4.0E-30 T 22-04-2016 SII_RS00445 7301c8820c75c094a5faf380f304fc64 234 PANTHER PTHR36204 2 231 6.1E-103 T 22-04-2016 SII_RS00445 7301c8820c75c094a5faf380f304fc64 234 SUPERFAMILY SSF51366 13 230 3.3E-51 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 SII_RS00445 7301c8820c75c094a5faf380f304fc64 234 Gene3D G3DSA:3.20.20.70 2 233 1.7E-92 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SII_RS00445 7301c8820c75c094a5faf380f304fc64 234 PANTHER PTHR36204:SF1 2 231 6.1E-103 T 22-04-2016 SII_RS00445 7301c8820c75c094a5faf380f304fc64 234 Pfam PF04131 Putative N-acetylmannosamine-6-phosphate epimerase 38 232 2.2E-82 T 22-04-2016 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase GO:0006051|GO:0047465 KEGG: 00520+5.1.3.9|UniPathway: UPA00629 SII_RS00445 7301c8820c75c094a5faf380f304fc64 234 Hamap MF_01235 Putative N-acetylmannosamine-6-phosphate 2-epimerase [nanE]. 11 232 38.543 T 22-04-2016 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase GO:0006051|GO:0047465 KEGG: 00520+5.1.3.9|UniPathway: UPA00629 SII_RS06375 cbb52977a76c06c310af152a24083c7a 227 Pfam PF08820 Domain of unknown function (DUF1803) 3 93 9.9E-31 T 22-04-2016 IPR014924 Protein of unknown function DUF1803 SII_RS01855 2383a2ab6fc889efa73ccd4c35e29fc7 243 Gene3D G3DSA:1.10.443.10 99 242 1.6E-14 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 SII_RS01855 2383a2ab6fc889efa73ccd4c35e29fc7 243 Gene3D G3DSA:1.10.150.130 11 78 5.0E-7 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal SII_RS01855 2383a2ab6fc889efa73ccd4c35e29fc7 243 Hamap MF_01817 Tyrosine recombinase XerD-like. 1 243 36.755 T 22-04-2016 IPR020876 Tyrosine recombinase XerD-like GO:0005737 SII_RS01855 2383a2ab6fc889efa73ccd4c35e29fc7 243 Pfam PF00589 Phage integrase family 97 242 5.3E-8 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 SII_RS01855 2383a2ab6fc889efa73ccd4c35e29fc7 243 SUPERFAMILY SSF56349 10 242 5.3E-18 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 SII_RS06535 d2a24e7e975113aa9fd3ead0d1b931a9 351 SUPERFAMILY SSF54211 176 345 2.2E-22 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SII_RS06535 d2a24e7e975113aa9fd3ead0d1b931a9 351 Gene3D G3DSA:3.30.230.10 229 345 1.6E-22 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SII_RS06535 d2a24e7e975113aa9fd3ead0d1b931a9 351 PANTHER PTHR10046:SF48 210 297 2.0E-45 T 22-04-2016 SII_RS06535 d2a24e7e975113aa9fd3ead0d1b931a9 351 PANTHER PTHR10046:SF48 313 351 2.0E-45 T 22-04-2016 SII_RS06535 d2a24e7e975113aa9fd3ead0d1b931a9 351 Pfam PF13180 PDZ domain 133 195 4.6E-9 T 22-04-2016 IPR001478 PDZ domain GO:0005515 SII_RS06535 d2a24e7e975113aa9fd3ead0d1b931a9 351 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 234 300 6.7E-7 T 22-04-2016 IPR008269 Peptidase S16, Lon C-terminal GO:0004176|GO:0004252|GO:0006508 SII_RS06535 d2a24e7e975113aa9fd3ead0d1b931a9 351 SUPERFAMILY SSF50156 133 194 1.27E-5 T 22-04-2016 IPR001478 PDZ domain GO:0005515 SII_RS06535 d2a24e7e975113aa9fd3ead0d1b931a9 351 Gene3D G3DSA:2.30.42.10 134 200 1.3E-7 T 22-04-2016 IPR001478 PDZ domain GO:0005515 SII_RS06535 d2a24e7e975113aa9fd3ead0d1b931a9 351 PANTHER PTHR10046 210 297 2.0E-45 T 22-04-2016 IPR027065 Lon protease GO:0004176|GO:0004252|GO:0005524|GO:0030163 SII_RS06535 d2a24e7e975113aa9fd3ead0d1b931a9 351 PANTHER PTHR10046 313 351 2.0E-45 T 22-04-2016 IPR027065 Lon protease GO:0004176|GO:0004252|GO:0005524|GO:0030163 SII_RS00435 500d0aaa8dca3e7568f8c0738cdcc2a8 605 SUPERFAMILY SSF52266 424 575 3.36E-9 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain SII_RS00435 500d0aaa8dca3e7568f8c0738cdcc2a8 605 PANTHER PTHR23028:SF53 2 347 1.8E-49 T 22-04-2016 SII_RS00435 500d0aaa8dca3e7568f8c0738cdcc2a8 605 PANTHER PTHR23028 2 347 1.8E-49 T 22-04-2016 SII_RS00435 500d0aaa8dca3e7568f8c0738cdcc2a8 605 Pfam PF01757 Acyltransferase family 4 339 1.1E-19 T 22-04-2016 IPR002656 Acyltransferase 3 GO:0016747 SII_RS08895 61559a912d8348312c37989d3cdbfe08 199 PANTHER PTHR30576 1 192 8.0E-82 T 22-04-2016 SII_RS08895 61559a912d8348312c37989d3cdbfe08 199 Pfam PF02397 Bacterial sugar transferase 6 184 9.1E-55 T 22-04-2016 IPR003362 Bacterial sugar transferase SII_RS06105 aff0ecf99ef4bab792a81b7f6e7287c4 245 Gene3D G3DSA:3.40.630.30 125 240 2.1E-8 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SII_RS06105 aff0ecf99ef4bab792a81b7f6e7287c4 245 SUPERFAMILY SSF55729 124 240 1.28E-12 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SII_RS06105 aff0ecf99ef4bab792a81b7f6e7287c4 245 Pfam PF12746 GNAT acetyltransferase 5 237 2.0E-64 T 22-04-2016 IPR027365 GNAT acetyltransferase YdfB-like KEGG: 00061+2.3.1.-|KEGG: 00253+2.3.1.-|KEGG: 00261+2.3.1.-|KEGG: 00310+2.3.1.-|KEGG: 00330+2.3.1.-|KEGG: 00332+2.3.1.-|KEGG: 00340+2.3.1.-|KEGG: 00350+2.3.1.-|KEGG: 00564+2.3.1.-|KEGG: 00565+2.3.1.-|KEGG: 00604+2.3.1.-|KEGG: 00623+2.3.1.-|KEGG: 00626+2.3.1.-|KEGG: 00627+2.3.1.-|KEGG: 00642+2.3.1.-|KEGG: 00650+2.3.1.-|KEGG: 00680+2.3.1.-|KEGG: 00903+2.3.1.-|KEGG: 00904+2.3.1.-|KEGG: 00906+2.3.1.-|KEGG: 00940+2.3.1.-|KEGG: 00942+2.3.1.-|KEGG: 00950+2.3.1.-|KEGG: 00960+2.3.1.-|KEGG: 00965+2.3.1.- SII_RS01675 6c98a56d23829221add329d14cf23567 103 SUPERFAMILY SSF53448 6 94 5.62E-14 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SII_RS01675 6c98a56d23829221add329d14cf23567 103 Pfam PF01501 Glycosyl transferase family 8 13 83 8.2E-8 T 22-04-2016 IPR002495 Glycosyl transferase, family 8 GO:0016757 SII_RS01675 6c98a56d23829221add329d14cf23567 103 Gene3D G3DSA:3.90.550.10 4 91 1.3E-12 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SII_RS03505 d882fba9ea15cc3c5f977cea610810fa 351 Gene3D G3DSA:3.40.50.1820 25 155 8.7E-38 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SII_RS03505 d882fba9ea15cc3c5f977cea610810fa 351 Gene3D G3DSA:3.40.50.1820 188 343 8.7E-38 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SII_RS03505 d882fba9ea15cc3c5f977cea610810fa 351 SUPERFAMILY SSF53474 189 343 3.62E-32 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SII_RS03505 d882fba9ea15cc3c5f977cea610810fa 351 SUPERFAMILY SSF53474 26 161 3.62E-32 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SII_RS03505 d882fba9ea15cc3c5f977cea610810fa 351 Pfam PF12697 Alpha/beta hydrolase family 51 336 5.8E-17 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 SII_RS03505 d882fba9ea15cc3c5f977cea610810fa 351 PANTHER PTHR10992 222 281 4.6E-23 T 22-04-2016 SII_RS03505 d882fba9ea15cc3c5f977cea610810fa 351 PANTHER PTHR10992 26 186 4.6E-23 T 22-04-2016 SII_RS03505 d882fba9ea15cc3c5f977cea610810fa 351 PANTHER PTHR10992 301 346 4.6E-23 T 22-04-2016 SII_RS02630 d781579c2c597d068102707ddd84b584 185 SUPERFAMILY SSF51306 24 182 4.19E-33 T 22-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C SII_RS02630 d781579c2c597d068102707ddd84b584 185 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 11 176 7.4E-35 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 SII_RS02630 d781579c2c597d068102707ddd84b584 185 Gene3D G3DSA:2.10.109.10 136 183 3.0E-19 T 22-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain SII_RS02630 d781579c2c597d068102707ddd84b584 185 Gene3D G3DSA:2.10.109.10 23 81 3.0E-19 T 22-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain SII_RS02630 d781579c2c597d068102707ddd84b584 185 PANTHER PTHR12383 1 183 1.6E-20 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 SII_RS02630 d781579c2c597d068102707ddd84b584 185 Pfam PF00717 Peptidase S24-like 42 95 1.0E-4 T 22-04-2016 IPR019759 Peptidase S24/S26A/S26B SII_RS02630 d781579c2c597d068102707ddd84b584 185 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 136 155 2.0E-8 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 SII_RS02630 d781579c2c597d068102707ddd84b584 185 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 26 42 2.0E-8 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 SII_RS02630 d781579c2c597d068102707ddd84b584 185 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 71 83 2.0E-8 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 SII_RS07390 43ca56f6a1bb1cc2b9122798c63a985f 303 SUPERFAMILY SSF103481 199 293 2.22E-10 T 22-04-2016 SII_RS07390 43ca56f6a1bb1cc2b9122798c63a985f 303 PANTHER PTHR22911 1 299 4.5E-95 T 22-04-2016 SII_RS07390 43ca56f6a1bb1cc2b9122798c63a985f 303 SUPERFAMILY SSF103481 41 148 2.48E-8 T 22-04-2016 SII_RS07390 43ca56f6a1bb1cc2b9122798c63a985f 303 Pfam PF00892 EamA-like transporter family 158 290 1.1E-16 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 SII_RS07390 43ca56f6a1bb1cc2b9122798c63a985f 303 Pfam PF00892 EamA-like transporter family 6 144 8.2E-16 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 SII_RS07390 43ca56f6a1bb1cc2b9122798c63a985f 303 PANTHER PTHR22911:SF65 1 299 4.5E-95 T 22-04-2016 SII_RS00630 a4072dfd642a30a582c89a9a2cd2ba28 289 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 126 140 - T 22-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 SII_RS00630 a4072dfd642a30a582c89a9a2cd2ba28 289 SUPERFAMILY SSF55120 83 276 3.04E-59 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 SII_RS00630 a4072dfd642a30a582c89a9a2cd2ba28 289 PANTHER PTHR11079:SF71 53 287 6.4E-55 T 22-04-2016 SII_RS00630 a4072dfd642a30a582c89a9a2cd2ba28 289 PANTHER PTHR11079 53 287 6.4E-55 T 22-04-2016 SII_RS00630 a4072dfd642a30a582c89a9a2cd2ba28 289 Pfam PF00849 RNA pseudouridylate synthase 89 234 2.9E-32 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 SII_RS03215 1338c62fb74a6e6906dd581178c28220 119 Pfam PF12666 PrgI family protein 4 90 1.5E-17 T 22-04-2016 IPR024414 Uncharacterised protein family PrgI SII_RS06885 539cf4bf7c0e7dfb1170b6d363c53d41 246 Pfam PF00005 ABC transporter 21 170 8.9E-34 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SII_RS06885 539cf4bf7c0e7dfb1170b6d363c53d41 246 PANTHER PTHR24220:SF327 7 246 1.7E-126 T 22-04-2016 SII_RS06885 539cf4bf7c0e7dfb1170b6d363c53d41 246 PIRSF PIRSF039085 2 246 2.5E-108 T 22-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 SII_RS06885 539cf4bf7c0e7dfb1170b6d363c53d41 246 Gene3D G3DSA:3.40.50.300 4 242 1.3E-80 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS06885 539cf4bf7c0e7dfb1170b6d363c53d41 246 PANTHER PTHR24220 7 246 1.7E-126 T 22-04-2016 SII_RS06885 539cf4bf7c0e7dfb1170b6d363c53d41 246 SUPERFAMILY SSF52540 5 240 4.51E-75 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS06885 539cf4bf7c0e7dfb1170b6d363c53d41 246 SMART SM00382 30 218 2.8E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain SII_RS06885 539cf4bf7c0e7dfb1170b6d363c53d41 246 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SII_RS03095 791d2651ef608b65c0a79d58345c8eac 268 SUPERFAMILY SSF161098 4 261 6.45E-50 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SII_RS03095 791d2651ef608b65c0a79d58345c8eac 268 PANTHER PTHR30193:SF10 1 268 6.2E-105 T 22-04-2016 SII_RS03095 791d2651ef608b65c0a79d58345c8eac 268 Gene3D G3DSA:1.10.3720.10 7 263 6.6E-47 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SII_RS03095 791d2651ef608b65c0a79d58345c8eac 268 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 61 262 2.6E-9 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SII_RS03095 791d2651ef608b65c0a79d58345c8eac 268 PANTHER PTHR30193 1 268 6.2E-105 T 22-04-2016 SII_RS03810 6651f9524a2db8b914d0e0734f3db1a4 169 PANTHER PTHR40044 1 169 3.2E-46 T 22-04-2016 SII_RS03810 6651f9524a2db8b914d0e0734f3db1a4 169 PANTHER PTHR40044:SF1 1 169 3.2E-46 T 22-04-2016 SII_RS03810 6651f9524a2db8b914d0e0734f3db1a4 169 Pfam PF06177 QueT transporter 9 163 3.9E-35 T 22-04-2016 IPR010387 Queuosine precursor transporter QueT GO:0005886 SII_RS03810 6651f9524a2db8b914d0e0734f3db1a4 169 PIRSF PIRSF031501 1 169 3.6E-58 T 22-04-2016 IPR010387 Queuosine precursor transporter QueT GO:0005886 SII_RS09195 e3359fbbea400bf08257f5c39a943120 459 Pfam PF01719 Plasmid replication protein 55 157 1.3E-7 T 22-04-2016 IPR002631 Plasmid replication protein GO:0003677|GO:0003916|GO:0005727|GO:0006260 SII_RS09195 e3359fbbea400bf08257f5c39a943120 459 Gene3D G3DSA:3.40.50.300 367 400 1.9E-6 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS09195 e3359fbbea400bf08257f5c39a943120 459 Gene3D G3DSA:3.40.50.300 254 301 1.9E-6 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS09195 e3359fbbea400bf08257f5c39a943120 459 Pfam PF00910 RNA helicase 244 317 1.0E-6 T 22-04-2016 IPR000605 Helicase, superfamily 3, single-stranded DNA/RNA virus GO:0003723|GO:0003724 SII_RS09195 e3359fbbea400bf08257f5c39a943120 459 Gene3D G3DSA:3.40.50.300 213 253 2.1E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS09195 e3359fbbea400bf08257f5c39a943120 459 SUPERFAMILY SSF52540 153 345 3.69E-10 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS04385 fa58e4f1a618cdf4d1ece8b94f9fe003 318 Pfam PF02653 Branched-chain amino acid transport system / permease component 12 297 2.8E-36 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 SII_RS04385 fa58e4f1a618cdf4d1ece8b94f9fe003 318 PANTHER PTHR32196:SF40 9 318 2.3E-113 T 22-04-2016 SII_RS04385 fa58e4f1a618cdf4d1ece8b94f9fe003 318 PANTHER PTHR32196 9 318 2.3E-113 T 22-04-2016 SII_RS04120 157b349ef59e9249f64a555cf2c852da 414 PANTHER PTHR30543:SF6 1 194 5.4E-86 T 22-04-2016 SII_RS04120 157b349ef59e9249f64a555cf2c852da 414 Pfam PF03358 NADPH-dependent FMN reductase 1 147 3.2E-32 T 22-04-2016 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 SII_RS04120 157b349ef59e9249f64a555cf2c852da 414 PANTHER PTHR30543 1 194 5.4E-86 T 22-04-2016 SII_RS04120 157b349ef59e9249f64a555cf2c852da 414 Gene3D G3DSA:3.40.50.360 1 184 5.1E-45 T 22-04-2016 IPR029039 Flavoprotein-like domain SII_RS04120 157b349ef59e9249f64a555cf2c852da 414 SUPERFAMILY SSF52218 1 173 2.39E-37 T 22-04-2016 IPR029039 Flavoprotein-like domain SII_RS04120 157b349ef59e9249f64a555cf2c852da 414 Gene3D G3DSA:3.30.450.20 223 371 3.3E-35 T 22-04-2016 SII_RS04120 157b349ef59e9249f64a555cf2c852da 414 Pfam PF13596 PAS domain 242 355 1.4E-28 T 22-04-2016 SII_RS03105 9ee0aa904516cd1a862f9c0181917a1d 356 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 155 169 3.1E-61 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 SII_RS03105 9ee0aa904516cd1a862f9c0181917a1d 356 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 40 56 3.1E-61 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 SII_RS03105 9ee0aa904516cd1a862f9c0181917a1d 356 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 56 77 3.1E-61 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 SII_RS03105 9ee0aa904516cd1a862f9c0181917a1d 356 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 99 112 3.1E-61 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 SII_RS03105 9ee0aa904516cd1a862f9c0181917a1d 356 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 83 97 3.1E-61 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 SII_RS03105 9ee0aa904516cd1a862f9c0181917a1d 356 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 130 146 3.1E-61 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 SII_RS03105 9ee0aa904516cd1a862f9c0181917a1d 356 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 173 192 3.1E-61 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 SII_RS03105 9ee0aa904516cd1a862f9c0181917a1d 356 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 254 273 3.1E-61 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 SII_RS03105 9ee0aa904516cd1a862f9c0181917a1d 356 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 299 325 3.1E-61 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 SII_RS03105 9ee0aa904516cd1a862f9c0181917a1d 356 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 210 229 3.1E-61 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 SII_RS03105 9ee0aa904516cd1a862f9c0181917a1d 356 PANTHER PTHR30222 8 355 7.7E-110 T 22-04-2016 SII_RS03105 9ee0aa904516cd1a862f9c0181917a1d 356 Gene3D G3DSA:3.40.190.10 141 276 3.0E-18 T 22-04-2016 SII_RS03105 9ee0aa904516cd1a862f9c0181917a1d 356 SUPERFAMILY SSF53850 35 352 1.87E-93 T 22-04-2016 SII_RS03105 9ee0aa904516cd1a862f9c0181917a1d 356 PANTHER PTHR30222:SF5 8 355 7.7E-110 T 22-04-2016 SII_RS03105 9ee0aa904516cd1a862f9c0181917a1d 356 Gene3D G3DSA:3.40.190.10 35 139 2.5E-64 T 22-04-2016 SII_RS03105 9ee0aa904516cd1a862f9c0181917a1d 356 Gene3D G3DSA:3.40.190.10 277 320 2.5E-64 T 22-04-2016 SII_RS03105 9ee0aa904516cd1a862f9c0181917a1d 356 PIRSF PIRSF019574 1 355 1.8E-125 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 SII_RS03105 9ee0aa904516cd1a862f9c0181917a1d 356 Pfam PF13416 Bacterial extracellular solute-binding protein 50 320 3.9E-38 T 22-04-2016 SII_RS09505 c7f197307251bbf836ad0547dc72330e 858 PANTHER PTHR38454:SF1 1 856 2.7E-110 T 22-04-2016 SII_RS09505 c7f197307251bbf836ad0547dc72330e 858 PANTHER PTHR38454 1 856 2.7E-110 T 22-04-2016 SII_RS09505 c7f197307251bbf836ad0547dc72330e 858 Pfam PF09586 Bacterial membrane protein YfhO 15 837 5.4E-255 T 22-04-2016 IPR018580 Uncharacterised protein family YfhO SII_RS05675 20e16dd2fe7ed5aaa4e14856475e26dc 574 Hamap MF_00728 Septation ring formation regulator EzrA [ezrA]. 6 568 25.657 T 22-04-2016 IPR010379 Septation ring formation regulator EzrA GO:0000921|GO:0005940|GO:0016021 SII_RS05675 20e16dd2fe7ed5aaa4e14856475e26dc 574 PANTHER PTHR41314 3 574 2.6E-183 T 22-04-2016 SII_RS05675 20e16dd2fe7ed5aaa4e14856475e26dc 574 Pfam PF06160 Septation ring formation regulator, EzrA 8 565 3.0E-178 T 22-04-2016 IPR010379 Septation ring formation regulator EzrA GO:0000921|GO:0005940|GO:0016021 SII_RS05875 6a2d136224e80c2dc4bb41e5e336801c 409 TIGRFAM TIGR01078 arcA: arginine deiminase 6 408 1.4E-180 T 22-04-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 SII_RS05875 6a2d136224e80c2dc4bb41e5e336801c 409 Gene3D G3DSA:3.75.10.10 157 408 1.4E-128 T 22-04-2016 SII_RS05875 6a2d136224e80c2dc4bb41e5e336801c 409 Gene3D G3DSA:3.75.10.10 2 69 1.4E-128 T 22-04-2016 SII_RS05875 6a2d136224e80c2dc4bb41e5e336801c 409 Pfam PF02274 Amidinotransferase 20 406 9.4E-97 T 22-04-2016 SII_RS05875 6a2d136224e80c2dc4bb41e5e336801c 409 SUPERFAMILY SSF55909 3 408 9.64E-133 T 22-04-2016 SII_RS05875 6a2d136224e80c2dc4bb41e5e336801c 409 PRINTS PR01466 Bacterial arginine deiminase signature 365 379 1.5E-58 T 22-04-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 SII_RS05875 6a2d136224e80c2dc4bb41e5e336801c 409 PRINTS PR01466 Bacterial arginine deiminase signature 4 24 1.5E-58 T 22-04-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 SII_RS05875 6a2d136224e80c2dc4bb41e5e336801c 409 PRINTS PR01466 Bacterial arginine deiminase signature 184 199 1.5E-58 T 22-04-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 SII_RS05875 6a2d136224e80c2dc4bb41e5e336801c 409 PRINTS PR01466 Bacterial arginine deiminase signature 345 362 1.5E-58 T 22-04-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 SII_RS05875 6a2d136224e80c2dc4bb41e5e336801c 409 PRINTS PR01466 Bacterial arginine deiminase signature 156 174 1.5E-58 T 22-04-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 SII_RS05875 6a2d136224e80c2dc4bb41e5e336801c 409 PRINTS PR01466 Bacterial arginine deiminase signature 388 406 1.5E-58 T 22-04-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 SII_RS05875 6a2d136224e80c2dc4bb41e5e336801c 409 Gene3D G3DSA:1.10.3930.10 70 156 8.0E-29 T 22-04-2016 SII_RS05875 6a2d136224e80c2dc4bb41e5e336801c 409 Hamap MF_00242 Arginine deiminase [arcA]. 3 409 45.638 T 22-04-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 SII_RS05875 6a2d136224e80c2dc4bb41e5e336801c 409 PIRSF PIRSF006356 1 409 2.2E-171 T 22-04-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 SII_RS05875 6a2d136224e80c2dc4bb41e5e336801c 409 PANTHER PTHR12737 313 409 1.5E-117 T 22-04-2016 IPR033199 Dimethylarginine dimethylaminohydrolase/arginine deiminase KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 SII_RS05875 6a2d136224e80c2dc4bb41e5e336801c 409 PANTHER PTHR12737 156 294 1.5E-117 T 22-04-2016 IPR033199 Dimethylarginine dimethylaminohydrolase/arginine deiminase KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 SII_RS05875 6a2d136224e80c2dc4bb41e5e336801c 409 PANTHER PTHR12737 1 93 1.5E-117 T 22-04-2016 IPR033199 Dimethylarginine dimethylaminohydrolase/arginine deiminase KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 SII_RS05875 6a2d136224e80c2dc4bb41e5e336801c 409 PANTHER PTHR12737:SF13 313 409 1.5E-117 T 22-04-2016 SII_RS05875 6a2d136224e80c2dc4bb41e5e336801c 409 PANTHER PTHR12737:SF13 156 294 1.5E-117 T 22-04-2016 SII_RS05875 6a2d136224e80c2dc4bb41e5e336801c 409 PANTHER PTHR12737:SF13 1 93 1.5E-117 T 22-04-2016 SII_RS01650 8dc843cbcd02155f8bf77f8a7565b189 253 Pfam PF01048 Phosphorylase superfamily 54 238 7.5E-25 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 SII_RS01650 8dc843cbcd02155f8bf77f8a7565b189 253 SUPERFAMILY SSF53167 1 253 1.44E-53 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 SII_RS01650 8dc843cbcd02155f8bf77f8a7565b189 253 Gene3D G3DSA:3.40.50.1580 25 251 1.8E-45 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 SII_RS05490 acdf87caedade4768ffbe80cec79cca5 188 PANTHER PTHR34822 2 188 1.7E-37 T 22-04-2016 SII_RS05490 acdf87caedade4768ffbe80cec79cca5 188 SUPERFAMILY SSF81301 20 182 7.85E-42 T 22-04-2016 SII_RS05490 acdf87caedade4768ffbe80cec79cca5 188 Gene3D G3DSA:3.30.460.10 14 183 3.1E-47 T 22-04-2016 SII_RS05490 acdf87caedade4768ffbe80cec79cca5 188 Pfam PF04229 GrpB protein 19 177 2.6E-38 T 22-04-2016 IPR007344 GrpB/Dephospho-CoA kinase SII_RS00290 1605a520332ec82141e68cb803963b8b 271 SUPERFAMILY SSF53271 45 209 7.67E-10 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like SII_RS00290 1605a520332ec82141e68cb803963b8b 271 Gene3D G3DSA:3.40.50.2020 49 216 1.1E-8 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like SII_RS02810 edc24037aaf7fde5f4308a591a28d465 391 Pfam PF00633 Helix-hairpin-helix motif 112 141 2.3E-6 T 22-04-2016 IPR000445 Helix-hairpin-helix motif GO:0003677 SII_RS02810 edc24037aaf7fde5f4308a591a28d465 391 Pfam PF14815 NUDIX domain 249 379 1.3E-16 T 22-04-2016 IPR029119 MutY, C-terminal SII_RS02810 edc24037aaf7fde5f4308a591a28d465 391 PANTHER PTHR10359:SF1 13 340 2.7E-97 T 22-04-2016 SII_RS02810 edc24037aaf7fde5f4308a591a28d465 391 PANTHER PTHR10359 13 340 2.7E-97 T 22-04-2016 SII_RS02810 edc24037aaf7fde5f4308a591a28d465 391 SUPERFAMILY SSF48150 17 235 6.91E-69 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 SII_RS02810 edc24037aaf7fde5f4308a591a28d465 391 Gene3D G3DSA:1.10.1670.10 136 237 1.8E-33 T 22-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal SII_RS02810 edc24037aaf7fde5f4308a591a28d465 391 Gene3D G3DSA:1.10.340.30 34 135 1.0E-43 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 SII_RS02810 edc24037aaf7fde5f4308a591a28d465 391 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 48 176 6.5E-18 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 SII_RS02810 edc24037aaf7fde5f4308a591a28d465 391 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 20 281 4.5E-94 T 22-04-2016 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 SII_RS02810 edc24037aaf7fde5f4308a591a28d465 391 SUPERFAMILY SSF55811 233 382 9.33E-21 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SII_RS02810 edc24037aaf7fde5f4308a591a28d465 391 Gene3D G3DSA:3.90.79.10 244 386 1.1E-30 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SII_RS02810 edc24037aaf7fde5f4308a591a28d465 391 SMART SM00478 52 203 2.0E-42 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 SII_RS09525 477cd515b1d1299af422ad95f9f95366 380 Gene3D G3DSA:3.30.565.10 240 359 2.2E-8 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SII_RS09525 477cd515b1d1299af422ad95f9f95366 380 SUPERFAMILY SSF55874 240 362 3.01E-10 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SII_RS09525 477cd515b1d1299af422ad95f9f95366 380 PANTHER PTHR40448 1 379 1.9E-70 T 22-04-2016 SII_RS09525 477cd515b1d1299af422ad95f9f95366 380 Pfam PF14501 GHKL domain 273 373 3.2E-16 T 22-04-2016 IPR032834 Sensor histidine kinase NatK, C-terminal domain SII_RS09525 477cd515b1d1299af422ad95f9f95366 380 PANTHER PTHR40448:SF1 1 379 1.9E-70 T 22-04-2016 SII_RS01430 e1bd859ae4cab9b0a82abf8a99138008 301 Pfam PF09992 Phosphodiester glycosidase 121 299 7.7E-44 T 22-04-2016 IPR018711 Phosphodiester glycosidase SII_RS01430 e1bd859ae4cab9b0a82abf8a99138008 301 PANTHER PTHR40446 130 299 7.8E-19 T 22-04-2016 SII_RS01430 e1bd859ae4cab9b0a82abf8a99138008 301 PANTHER PTHR40446:SF1 130 299 7.8E-19 T 22-04-2016 SII_RS02770 ba660abfb7f2eb6321f5bbe0eb81feb7 115 Pfam PF08866 Putative amino acid metabolism 1 110 9.4E-42 T 22-04-2016 IPR014965 Putative amino acid metabolism SII_RS02770 ba660abfb7f2eb6321f5bbe0eb81feb7 115 Gene3D G3DSA:3.30.1820.10 1 112 1.9E-46 T 22-04-2016 IPR014965 Putative amino acid metabolism SII_RS02770 ba660abfb7f2eb6321f5bbe0eb81feb7 115 SUPERFAMILY SSF160800 1 112 1.29E-41 T 22-04-2016 IPR014965 Putative amino acid metabolism SII_RS08780 4392795ac1b2c3749ce1126adfc65b52 98 Pfam PF00276 Ribosomal protein L23 5 88 1.1E-29 T 22-04-2016 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 SII_RS08780 4392795ac1b2c3749ce1126adfc65b52 98 SUPERFAMILY SSF54189 1 92 2.01E-29 T 22-04-2016 IPR012678 Ribosomal protein L23/L15e core domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 SII_RS08780 4392795ac1b2c3749ce1126adfc65b52 98 PANTHER PTHR11620 1 93 1.8E-31 T 22-04-2016 SII_RS08780 4392795ac1b2c3749ce1126adfc65b52 98 Gene3D G3DSA:3.30.70.330 1 93 3.9E-33 T 22-04-2016 IPR012677 Nucleotide-binding alpha-beta plait domain GO:0000166 SII_RS08780 4392795ac1b2c3749ce1126adfc65b52 98 ProSitePatterns PS00050 Ribosomal protein L23 signature. 77 92 - T 22-04-2016 IPR001014 Ribosomal protein L23/L25, conserved site SII_RS08780 4392795ac1b2c3749ce1126adfc65b52 98 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 4 95 21.413 T 22-04-2016 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 SII_RS07520 10a8fba227c3566e9bbb347ea44a91e9 465 Pfam PF00232 Glycosyl hydrolase family 1 5 463 2.9E-133 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 SII_RS07520 10a8fba227c3566e9bbb347ea44a91e9 465 PRINTS PR00131 Glycosyl hydrolase family 1 signature 289 303 8.9E-17 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 SII_RS07520 10a8fba227c3566e9bbb347ea44a91e9 465 PRINTS PR00131 Glycosyl hydrolase family 1 signature 386 397 8.9E-17 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 SII_RS07520 10a8fba227c3566e9bbb347ea44a91e9 465 PRINTS PR00131 Glycosyl hydrolase family 1 signature 362 370 8.9E-17 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 SII_RS07520 10a8fba227c3566e9bbb347ea44a91e9 465 PRINTS PR00131 Glycosyl hydrolase family 1 signature 431 443 8.9E-17 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 SII_RS07520 10a8fba227c3566e9bbb347ea44a91e9 465 PRINTS PR00131 Glycosyl hydrolase family 1 signature 407 424 8.9E-17 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 SII_RS07520 10a8fba227c3566e9bbb347ea44a91e9 465 SUPERFAMILY SSF51445 3 464 1.13E-163 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily SII_RS07520 10a8fba227c3566e9bbb347ea44a91e9 465 Gene3D G3DSA:3.20.20.80 5 457 2.0E-151 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 SII_RS07520 10a8fba227c3566e9bbb347ea44a91e9 465 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 362 370 - T 22-04-2016 IPR018120 Glycoside hydrolase family 1, active site SII_RS07520 10a8fba227c3566e9bbb347ea44a91e9 465 PANTHER PTHR10353:SF73 5 465 7.4E-295 T 22-04-2016 SII_RS07520 10a8fba227c3566e9bbb347ea44a91e9 465 PANTHER PTHR10353 5 465 7.4E-295 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 SII_RS03590 3e77fe856862d3242bea964afe51dda4 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 4.9E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SII_RS03590 3e77fe856862d3242bea964afe51dda4 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 4.9E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SII_RS03590 3e77fe856862d3242bea964afe51dda4 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 4.9E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SII_RS03590 3e77fe856862d3242bea964afe51dda4 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 1.0E-17 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SII_RS03590 3e77fe856862d3242bea964afe51dda4 302 Pfam PF03466 LysR substrate binding domain 122 298 8.8E-10 T 22-04-2016 IPR005119 LysR, substrate-binding SII_RS03590 3e77fe856862d3242bea964afe51dda4 302 Gene3D G3DSA:3.40.190.10 174 266 5.2E-6 T 22-04-2016 SII_RS03590 3e77fe856862d3242bea964afe51dda4 302 PANTHER PTHR30346:SF0 1 299 2.1E-80 T 22-04-2016 SII_RS03590 3e77fe856862d3242bea964afe51dda4 302 PANTHER PTHR30346 1 299 2.1E-80 T 22-04-2016 SII_RS03590 3e77fe856862d3242bea964afe51dda4 302 Gene3D G3DSA:1.10.10.10 1 80 8.1E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SII_RS03590 3e77fe856862d3242bea964afe51dda4 302 SUPERFAMILY SSF46785 1 82 1.73E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SII_RS03590 3e77fe856862d3242bea964afe51dda4 302 SUPERFAMILY SSF53850 103 296 1.81E-20 T 22-04-2016 SII_RS00060 bae43637f3140f34535dfc74b4d92f9d 180 PANTHER PTHR22573 4 180 2.0E-82 T 22-04-2016 SII_RS00060 bae43637f3140f34535dfc74b4d92f9d 180 PANTHER PTHR22573:SF56 4 180 2.0E-82 T 22-04-2016 SII_RS00060 bae43637f3140f34535dfc74b4d92f9d 180 SUPERFAMILY SSF53271 6 178 2.36E-57 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like SII_RS00060 bae43637f3140f34535dfc74b4d92f9d 180 TIGRFAM TIGR01203 HGPRTase: hypoxanthine phosphoribosyltransferase 9 174 8.5E-64 T 22-04-2016 IPR005904 Hypoxanthine phosphoribosyl transferase GO:0004422|GO:0005737|GO:0006166 KEGG: 00230+2.4.2.8|KEGG: 00983+2.4.2.8|MetaCyc: PWY-6599|MetaCyc: PWY-6609|MetaCyc: PWY-6610|MetaCyc: PWY-6620|UniPathway: UPA00591 SII_RS00060 bae43637f3140f34535dfc74b4d92f9d 180 Pfam PF00156 Phosphoribosyl transferase domain 12 161 3.4E-32 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 SII_RS00060 bae43637f3140f34535dfc74b4d92f9d 180 Gene3D G3DSA:3.40.50.2020 2 179 1.8E-80 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like SII_RS03310 877b4f5db09ff9f06fe762754430fc43 140 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 75 134 1.2E-12 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SII_RS03310 877b4f5db09ff9f06fe762754430fc43 140 Gene3D G3DSA:1.10.10.10 78 138 1.2E-12 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SII_RS03310 877b4f5db09ff9f06fe762754430fc43 140 SUPERFAMILY SSF88659 78 137 1.35E-16 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SII_RS03310 877b4f5db09ff9f06fe762754430fc43 140 Pfam PF08281 Sigma-70, region 4 80 126 1.4E-10 T 22-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SII_RS01850 d2e24926752f8aa80272bc1a24784373 153 SMART SM00116 92 138 0.34 T 22-04-2016 IPR000644 CBS domain SII_RS01850 d2e24926752f8aa80272bc1a24784373 153 SMART SM00116 23 71 0.05 T 22-04-2016 IPR000644 CBS domain SII_RS01850 d2e24926752f8aa80272bc1a24784373 153 PANTHER PTHR11911:SF103 22 150 1.2E-39 T 22-04-2016 SII_RS01850 d2e24926752f8aa80272bc1a24784373 153 Gene3D G3DSA:3.10.580.10 15 148 9.4E-31 T 22-04-2016 SII_RS01850 d2e24926752f8aa80272bc1a24784373 153 Pfam PF00571 CBS domain 35 71 1.4E-6 T 22-04-2016 IPR000644 CBS domain SII_RS01850 d2e24926752f8aa80272bc1a24784373 153 Pfam PF00571 CBS domain 79 137 2.9E-9 T 22-04-2016 IPR000644 CBS domain SII_RS01850 d2e24926752f8aa80272bc1a24784373 153 SUPERFAMILY SSF54631 17 137 1.26E-25 T 22-04-2016 SII_RS01850 d2e24926752f8aa80272bc1a24784373 153 PANTHER PTHR11911 22 150 1.2E-39 T 22-04-2016 SII_RS05720 02676d4541cd4054ef93c087128b69a2 230 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SII_RS05720 02676d4541cd4054ef93c087128b69a2 230 PANTHER PTHR24220 5 230 3.1E-126 T 22-04-2016 SII_RS05720 02676d4541cd4054ef93c087128b69a2 230 SMART SM00382 29 216 2.2E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain SII_RS05720 02676d4541cd4054ef93c087128b69a2 230 SUPERFAMILY SSF52540 3 224 4.13E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS05720 02676d4541cd4054ef93c087128b69a2 230 Pfam PF00005 ABC transporter 20 167 7.9E-36 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SII_RS05720 02676d4541cd4054ef93c087128b69a2 230 TIGRFAM TIGR02673 FtsE: cell division ATP-binding protein FtsE 3 216 2.1E-89 T 22-04-2016 IPR005286 Cell division protein FtsE, ATP-binding GO:0005524|GO:0051301 SII_RS05720 02676d4541cd4054ef93c087128b69a2 230 PANTHER PTHR24220:SF470 5 230 3.1E-126 T 22-04-2016 SII_RS05720 02676d4541cd4054ef93c087128b69a2 230 Gene3D G3DSA:3.40.50.300 2 221 4.2E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS09415 38fd8c2e7037a91301cc154823ad4cce 290 TIGRFAM TIGR00718 sda_alpha: L-serine dehydratase, iron-sulfur-dependent, alpha subunit 1 289 2.6E-111 T 22-04-2016 IPR004642 Serine dehydratase, alpha subunit GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17|UniPathway: UPA00138 SII_RS09415 38fd8c2e7037a91301cc154823ad4cce 290 PANTHER PTHR30182 1 289 7.3E-132 T 22-04-2016 SII_RS09415 38fd8c2e7037a91301cc154823ad4cce 290 Pfam PF03313 Serine dehydratase alpha chain 19 275 3.1E-72 T 22-04-2016 IPR005130 Serine dehydratase-like, alpha subunit SII_RS00430 baf148af5f26df015e82d6c81a401191 137 Gene3D G3DSA:2.20.110.10 43 133 6.6E-24 T 22-04-2016 SII_RS00430 baf148af5f26df015e82d6c81a401191 137 PIRSF PIRSF034300 1 137 9.7E-54 T 22-04-2016 IPR014590 Uncharacterised conserved protein MORN repeat-containing SII_RS00430 baf148af5f26df015e82d6c81a401191 137 PANTHER PTHR23084 54 132 9.0E-23 T 22-04-2016 SII_RS00430 baf148af5f26df015e82d6c81a401191 137 SUPERFAMILY SSF82185 51 133 5.62E-21 T 22-04-2016 SII_RS00430 baf148af5f26df015e82d6c81a401191 137 Pfam PF02493 MORN repeat 78 98 0.0055 T 22-04-2016 IPR003409 MORN motif SII_RS00430 baf148af5f26df015e82d6c81a401191 137 Pfam PF02493 MORN repeat 55 77 3.4E-5 T 22-04-2016 IPR003409 MORN motif SII_RS00430 baf148af5f26df015e82d6c81a401191 137 Pfam PF02493 MORN repeat 101 119 3.9E-5 T 22-04-2016 IPR003409 MORN motif SII_RS00430 baf148af5f26df015e82d6c81a401191 137 SMART SM00698 76 97 0.11 T 22-04-2016 IPR003409 MORN motif SII_RS00430 baf148af5f26df015e82d6c81a401191 137 SMART SM00698 99 120 0.12 T 22-04-2016 IPR003409 MORN motif SII_RS00430 baf148af5f26df015e82d6c81a401191 137 SMART SM00698 53 74 0.24 T 22-04-2016 IPR003409 MORN motif SII_RS00775 6797f2553d10c1515707fc16f55b5831 271 PANTHER PTHR12428 55 239 1.6E-53 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 SII_RS00775 6797f2553d10c1515707fc16f55b5831 271 Pfam PF02096 60Kd inner membrane protein 55 236 2.8E-47 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 SII_RS00775 6797f2553d10c1515707fc16f55b5831 271 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 54 236 6.6E-53 T 22-04-2016 IPR028055 Membrane insertase YidC/Oxa1, C-terminal SII_RS00775 6797f2553d10c1515707fc16f55b5831 271 Hamap MF_01811 Membrane protein insertase YidC [yidC]. 2 240 28.686 T 22-04-2016 IPR023060 Membrane insertase YidC/YidC1/YidC2, Firmicutes SII_RS01660 bdae79e176594b2159edfba5e91b801d 278 PANTHER PTHR33514:SF1 1 272 2.2E-99 T 22-04-2016 SII_RS01660 bdae79e176594b2159edfba5e91b801d 278 PANTHER PTHR33514 1 272 2.2E-99 T 22-04-2016 SII_RS01660 bdae79e176594b2159edfba5e91b801d 278 Pfam PF02361 Cobalt transport protein 14 237 7.4E-32 T 22-04-2016 IPR003339 ABC/ECF transporter, transmembrane component SII_RS02750 ef699d430443fb141979a338f636a779 226 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 174 179 - T 22-04-2016 IPR020891 Uncharacterised protein family UPF0758, conserved site SII_RS02750 ef699d430443fb141979a338f636a779 226 Pfam PF04002 RadC-like JAB domain 106 222 2.8E-40 T 22-04-2016 IPR025657 RadC-like JAB domain SII_RS02750 ef699d430443fb141979a338f636a779 226 TIGRFAM TIGR00608 radc: DNA repair protein RadC 13 225 5.3E-70 T 22-04-2016 IPR001405 RadC protein SII_RS02750 ef699d430443fb141979a338f636a779 226 PANTHER PTHR30471 1 225 4.6E-94 T 22-04-2016 SII_RS02750 ef699d430443fb141979a338f636a779 226 Gene3D G3DSA:3.40.140.10 102 223 8.7E-44 T 22-04-2016 SII_RS02750 ef699d430443fb141979a338f636a779 226 PANTHER PTHR30471:SF3 1 225 4.6E-94 T 22-04-2016 SII_RS02750 ef699d430443fb141979a338f636a779 226 SUPERFAMILY SSF47781 16 91 2.3E-6 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 SII_RS00640 ec8cac201661134cf8df2b1a26f2dbd6 58 Gene3D G3DSA:1.20.5.1030 1 51 1.5E-11 T 22-04-2016 SII_RS00640 ec8cac201661134cf8df2b1a26f2dbd6 58 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 1 51 4.9E-11 T 22-04-2016 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 SII_RS00640 ec8cac201661134cf8df2b1a26f2dbd6 58 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 1 55 4.1E-10 T 22-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 SII_RS06265 1675ae6d1e68acd433d9d9d9e7f640a5 117 Pfam PF00462 Glutaredoxin 8 42 1.1E-4 T 22-04-2016 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 SII_RS06265 1675ae6d1e68acd433d9d9d9e7f640a5 117 Gene3D G3DSA:3.40.30.10 1 112 2.8E-35 T 22-04-2016 IPR012336 Thioredoxin-like fold SII_RS06265 1675ae6d1e68acd433d9d9d9e7f640a5 117 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 2 111 3.2E-30 T 22-04-2016 IPR006504 Transcriptional regulator Spx/MgsR SII_RS06265 1675ae6d1e68acd433d9d9d9e7f640a5 117 Pfam PF03960 ArsC family 48 111 1.2E-12 T 22-04-2016 IPR006660 Arsenate reductase-like SII_RS06265 1675ae6d1e68acd433d9d9d9e7f640a5 117 SUPERFAMILY SSF52833 3 112 1.7E-28 T 22-04-2016 IPR012336 Thioredoxin-like fold SII_RS06265 1675ae6d1e68acd433d9d9d9e7f640a5 117 PANTHER PTHR30041 1 111 5.5E-33 T 22-04-2016 SII_RS06265 1675ae6d1e68acd433d9d9d9e7f640a5 117 PANTHER PTHR30041:SF3 1 111 5.5E-33 T 22-04-2016 SII_RS06365 4072bdea846e5c54b8cd74f921015a59 481 SUPERFAMILY SSF53244 328 468 3.66E-32 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SII_RS06365 4072bdea846e5c54b8cd74f921015a59 481 PANTHER PTHR23135 22 481 2.1E-126 T 22-04-2016 SII_RS06365 4072bdea846e5c54b8cd74f921015a59 481 SUPERFAMILY SSF63418 15 107 2.09E-14 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 SII_RS06365 4072bdea846e5c54b8cd74f921015a59 481 Gene3D G3DSA:3.90.190.20 332 470 2.8E-35 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SII_RS06365 4072bdea846e5c54b8cd74f921015a59 481 Pfam PF02875 Mur ligase family, glutamate ligase domain 328 414 3.2E-17 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SII_RS06365 4072bdea846e5c54b8cd74f921015a59 481 Gene3D G3DSA:3.40.1190.10 107 331 9.9E-52 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SII_RS06365 4072bdea846e5c54b8cd74f921015a59 481 SUPERFAMILY SSF53623 78 340 5.49E-49 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SII_RS06365 4072bdea846e5c54b8cd74f921015a59 481 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 33 471 6.2E-91 T 22-04-2016 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 UniPathway: UPA00219 SII_RS06365 4072bdea846e5c54b8cd74f921015a59 481 PANTHER PTHR23135:SF4 22 481 2.1E-126 T 22-04-2016 SII_RS06365 4072bdea846e5c54b8cd74f921015a59 481 Gene3D G3DSA:3.40.1390.10 25 106 1.3E-8 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 SII_RS06365 4072bdea846e5c54b8cd74f921015a59 481 Pfam PF08245 Mur ligase middle domain 117 308 1.3E-33 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SII_RS06365 4072bdea846e5c54b8cd74f921015a59 481 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 15 481 27.628 T 22-04-2016 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 UniPathway: UPA00219 SII_RS03410 70fd3351e1ad8a0acfe74e4ac8a54e94 609 Pfam PF03432 Relaxase/Mobilisation nuclease domain 12 264 1.8E-71 T 22-04-2016 IPR005094 Endonuclease relaxase, MobA/VirD2 SII_RS07430 51a328be7baed22e6df5412edd1c38eb 404 Pfam PF00155 Aminotransferase class I and II 34 385 3.7E-48 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 SII_RS07430 51a328be7baed22e6df5412edd1c38eb 404 SUPERFAMILY SSF53383 5 402 1.77E-91 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SII_RS07430 51a328be7baed22e6df5412edd1c38eb 404 PANTHER PTHR11751 9 401 4.4E-163 T 22-04-2016 SII_RS07430 51a328be7baed22e6df5412edd1c38eb 404 PANTHER PTHR11751:SF303 9 401 4.4E-163 T 22-04-2016 SII_RS07430 51a328be7baed22e6df5412edd1c38eb 404 Gene3D G3DSA:3.90.1150.10 280 403 2.2E-36 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SII_RS07430 51a328be7baed22e6df5412edd1c38eb 404 Gene3D G3DSA:3.40.640.10 51 279 3.9E-65 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SII_RS03235 2996ecabcec68d0a50bc31228cf558b5 104 Pfam PF06125 Bacterial protein of unknown function (DUF961) 4 102 7.3E-37 T 22-04-2016 IPR010365 Protein of unknown function DUF961 SII_RS03915 1f8242e293b503223fdea92002cd6ac3 185 PANTHER PTHR23416 1 184 8.9E-80 T 22-04-2016 SII_RS03915 1f8242e293b503223fdea92002cd6ac3 185 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 92 105 0.049 T 22-04-2016 IPR001451 Hexapeptide repeat SII_RS03915 1f8242e293b503223fdea92002cd6ac3 185 PANTHER PTHR23416:SF58 1 184 8.9E-80 T 22-04-2016 SII_RS03915 1f8242e293b503223fdea92002cd6ac3 185 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 129 163 7.7E-11 T 22-04-2016 IPR001451 Hexapeptide repeat SII_RS03915 1f8242e293b503223fdea92002cd6ac3 185 Pfam PF12464 Maltose acetyltransferase 7 56 2.2E-12 T 22-04-2016 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 SII_RS03915 1f8242e293b503223fdea92002cd6ac3 185 SUPERFAMILY SSF51161 2 183 2.63E-45 T 22-04-2016 IPR011004 Trimeric LpxA-like SII_RS03915 1f8242e293b503223fdea92002cd6ac3 185 Gene3D G3DSA:2.160.10.10 2 183 3.9E-54 T 22-04-2016 SII_RS03915 1f8242e293b503223fdea92002cd6ac3 185 SMART SM01266 5 57 4.3E-16 T 22-04-2016 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 SII_RS05325 ef7476d42814df86d041661acf20da12 899 Pfam PF00311 Phosphoenolpyruvate carboxylase 129 899 1.3E-252 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 SII_RS05325 ef7476d42814df86d041661acf20da12 899 PANTHER PTHR30523 3 899 0.0 T 22-04-2016 SII_RS05325 ef7476d42814df86d041661acf20da12 899 ProSitePatterns PS00393 Phosphoenolpyruvate carboxylase active site 2. 552 564 - T 22-04-2016 IPR033129 Phosphoenolpyruvate carboxylase, His active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 SII_RS05325 ef7476d42814df86d041661acf20da12 899 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 186 202 9.6E-53 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 SII_RS05325 ef7476d42814df86d041661acf20da12 899 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 592 621 9.6E-53 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 SII_RS05325 ef7476d42814df86d041661acf20da12 899 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 550 570 9.6E-53 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 SII_RS05325 ef7476d42814df86d041661acf20da12 899 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 727 753 9.6E-53 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 SII_RS05325 ef7476d42814df86d041661acf20da12 899 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 388 408 9.6E-53 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 SII_RS05325 ef7476d42814df86d041661acf20da12 899 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 133 146 9.6E-53 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 SII_RS05325 ef7476d42814df86d041661acf20da12 899 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 243 258 9.6E-53 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 SII_RS05325 ef7476d42814df86d041661acf20da12 899 PANTHER PTHR30523:SF0 3 899 0.0 T 22-04-2016 SII_RS05325 ef7476d42814df86d041661acf20da12 899 Hamap MF_00595 Phosphoenolpyruvate carboxylase [ppc]. 8 899 16.959 T 22-04-2016 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 SII_RS05325 ef7476d42814df86d041661acf20da12 899 Gene3D G3DSA:1.20.1440.90 272 391 4.5E-25 T 22-04-2016 SII_RS05325 ef7476d42814df86d041661acf20da12 899 SUPERFAMILY SSF51621 17 899 1.52E-284 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 SII_RS06015 5abe9cb0c9401963275615239306b759 246 PIRSF PIRSF005650 1 245 3.6E-91 T 22-04-2016 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 SII_RS06015 5abe9cb0c9401963275615239306b759 246 Gene3D G3DSA:3.40.1160.10 4 238 1.2E-82 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SII_RS06015 5abe9cb0c9401963275615239306b759 246 Pfam PF00696 Amino acid kinase family 7 217 7.5E-27 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SII_RS06015 5abe9cb0c9401963275615239306b759 246 SUPERFAMILY SSF53633 4 239 8.64E-71 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SII_RS06015 5abe9cb0c9401963275615239306b759 246 Hamap MF_01220_B Uridylate kinase [pyrH]. 4 238 43.54 T 22-04-2016 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 SII_RS06015 5abe9cb0c9401963275615239306b759 246 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 6 237 2.7E-97 T 22-04-2016 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 SII_RS06015 5abe9cb0c9401963275615239306b759 246 PANTHER PTHR21499 4 244 2.3E-110 T 22-04-2016 SII_RS06015 5abe9cb0c9401963275615239306b759 246 PANTHER PTHR21499:SF23 4 244 2.3E-110 T 22-04-2016 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 SII_RS02510 d7e7c330a21b23278f7e918f49909057 282 Pfam PF02645 Uncharacterised protein, DegV family COG1307 2 280 9.5E-88 T 22-04-2016 IPR003797 DegV SII_RS02510 d7e7c330a21b23278f7e918f49909057 282 SUPERFAMILY SSF82549 1 279 3.14E-81 T 22-04-2016 SII_RS02510 d7e7c330a21b23278f7e918f49909057 282 PANTHER PTHR33434 1 280 4.2E-69 T 22-04-2016 SII_RS02510 d7e7c330a21b23278f7e918f49909057 282 Gene3D G3DSA:3.40.50.10170 1 148 5.8E-39 T 22-04-2016 SII_RS02510 d7e7c330a21b23278f7e918f49909057 282 Gene3D G3DSA:3.30.1180.10 157 279 1.2E-41 T 22-04-2016 SII_RS02510 d7e7c330a21b23278f7e918f49909057 282 TIGRFAM TIGR00762 DegV: EDD domain protein, DegV family 4 279 2.7E-88 T 22-04-2016 IPR003797 DegV SII_RS02510 d7e7c330a21b23278f7e918f49909057 282 PANTHER PTHR33434:SF2 1 280 4.2E-69 T 22-04-2016 SII_RS06225 22bebf8ab02777064627f794c0745492 151 Pfam PF11694 Protein of unknown function (DUF3290) 2 144 1.3E-43 T 22-04-2016 IPR021707 Protein of unknown function DUF3290 SII_RS05610 3c2219c9e028175988ded238b339dfbb 107 SUPERFAMILY SSF46973 6 101 2.09E-34 T 22-04-2016 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SII_RS05610 3c2219c9e028175988ded238b339dfbb 107 Gene3D G3DSA:1.20.58.80 7 104 6.6E-37 T 22-04-2016 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SII_RS05610 3c2219c9e028175988ded238b339dfbb 107 Pfam PF02255 PTS system, Lactose/Cellobiose specific IIA subunit 8 101 3.1E-34 T 22-04-2016 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SII_RS05610 3c2219c9e028175988ded238b339dfbb 107 PANTHER PTHR34382 1 104 1.6E-41 T 22-04-2016 SII_RS05610 3c2219c9e028175988ded238b339dfbb 107 PIRSF PIRSF000699 1 107 3.4E-37 T 22-04-2016 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SII_RS05610 3c2219c9e028175988ded238b339dfbb 107 PANTHER PTHR34382:SF2 1 104 1.6E-41 T 22-04-2016 SII_RS03260 80e7a0d2470fb53fd58f5ede6d9a5282 245 Gene3D G3DSA:3.40.50.150 5 172 1.0E-44 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SII_RS03260 80e7a0d2470fb53fd58f5ede6d9a5282 245 Pfam PF00398 Ribosomal RNA adenine dimethylase 2 239 3.8E-76 T 22-04-2016 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm SII_RS03260 80e7a0d2470fb53fd58f5ede6d9a5282 245 SMART SM00650 17 179 3.9E-60 T 22-04-2016 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 SII_RS03260 80e7a0d2470fb53fd58f5ede6d9a5282 245 SUPERFAMILY SSF53335 1 238 3.29E-54 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SII_RS03260 80e7a0d2470fb53fd58f5ede6d9a5282 245 PANTHER PTHR11727:SF7 6 178 1.9E-28 T 22-04-2016 SII_RS03260 80e7a0d2470fb53fd58f5ede6d9a5282 245 PANTHER PTHR11727 6 178 1.9E-28 T 22-04-2016 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm SII_RS03260 80e7a0d2470fb53fd58f5ede6d9a5282 245 Gene3D G3DSA:1.10.8.100 173 242 4.1E-45 T 22-04-2016 IPR023165 rRNA adenine dimethylase-like SII_RS03260 80e7a0d2470fb53fd58f5ede6d9a5282 245 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 33 60 - T 22-04-2016 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 SII_RS00715 2c710fc453ae73faa9ff0178781cb80b 185 SUPERFAMILY SSF55729 6 147 4.75E-18 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SII_RS00715 2c710fc453ae73faa9ff0178781cb80b 185 Gene3D G3DSA:3.40.630.30 3 151 2.9E-38 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SII_RS00715 2c710fc453ae73faa9ff0178781cb80b 185 Pfam PF13508 Acetyltransferase (GNAT) domain 45 132 1.9E-7 T 22-04-2016 IPR000182 GNAT domain GO:0008080 SII_RS05470 8f9faa02ce6453f448e7fd6c86045ca2 259 Gene3D G3DSA:3.40.50.1820 4 236 1.8E-30 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SII_RS05470 8f9faa02ce6453f448e7fd6c86045ca2 259 SUPERFAMILY SSF53474 3 255 3.16E-30 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SII_RS05470 8f9faa02ce6453f448e7fd6c86045ca2 259 Pfam PF12146 Serine aminopeptidase, S33 13 237 8.5E-12 T 22-04-2016 IPR022742 Serine aminopeptidase, S33 SII_RS05470 8f9faa02ce6453f448e7fd6c86045ca2 259 PANTHER PTHR10992 3 256 1.7E-21 T 22-04-2016 SII_RS02270 540961bebb6d53ddc565335cf61a0241 334 PANTHER PTHR35271 10 334 1.2E-63 T 22-04-2016 SII_RS02270 540961bebb6d53ddc565335cf61a0241 334 Gene3D G3DSA:3.40.50.2300 41 167 6.1E-57 T 22-04-2016 SII_RS02270 540961bebb6d53ddc565335cf61a0241 334 Gene3D G3DSA:3.40.50.2300 168 300 4.3E-51 T 22-04-2016 SII_RS02270 540961bebb6d53ddc565335cf61a0241 334 Pfam PF04392 ABC transporter substrate binding protein 42 332 3.4E-115 T 22-04-2016 IPR007487 ABC transporter, substrate-binding protein SII_RS02270 540961bebb6d53ddc565335cf61a0241 334 SUPERFAMILY SSF53822 41 260 1.07E-16 T 22-04-2016 IPR028082 Periplasmic binding protein-like I SII_RS06435 a95a8ebfea4371bb844552d29b1a8b63 253 PANTHER PTHR35794 1 229 3.5E-73 T 22-04-2016 SII_RS06435 a95a8ebfea4371bb844552d29b1a8b63 253 TIGRFAM TIGR03544 DivI1A_domain: DivIVA domain 3 36 2.4E-13 T 22-04-2016 IPR019933 DivIVA domain SII_RS06435 a95a8ebfea4371bb844552d29b1a8b63 253 Pfam PF05103 DivIVA protein 3 144 3.1E-40 T 22-04-2016 IPR007793 DivIVA family SII_RS06435 a95a8ebfea4371bb844552d29b1a8b63 253 PANTHER PTHR35794:SF2 1 229 3.5E-73 T 22-04-2016 SII_RS02460 c16592717d571d685bb8d944ecd447fb 91 Gene3D G3DSA:3.40.50.880 30 86 2.9E-7 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like SII_RS02460 c16592717d571d685bb8d944ecd447fb 91 Pfam PF04204 Homoserine O-succinyltransferase 30 84 5.9E-8 T 22-04-2016 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46|UniPathway: UPA00051 SII_RS02460 c16592717d571d685bb8d944ecd447fb 91 ProDom PD037892 HOMOSERINE O-SUCCINYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIOSYNTHESIS TRANSSUCCINYLASE HTS METHIONINE O- AMINO-ACID 20 81 2.0E-9 T 22-04-2016 SII_RS05910 066766fe42bd50affe91f6eb26834362 97 SUPERFAMILY SSF109797 4 96 2.41E-15 T 22-04-2016 SII_RS05910 066766fe42bd50affe91f6eb26834362 97 Gene3D G3DSA:1.20.1470.10 10 95 8.3E-15 T 22-04-2016 SII_RS05910 066766fe42bd50affe91f6eb26834362 97 Pfam PF08951 Enterocin A Immunity 10 75 1.7E-8 T 22-04-2016 IPR015046 Enterocin A Immunity SII_RS04590 f2fe054ddb2fefbdde7bf0a3fd9f574f 511 PANTHER PTHR19211 20 507 1.2E-74 T 22-04-2016 SII_RS04590 f2fe054ddb2fefbdde7bf0a3fd9f574f 511 PANTHER PTHR19211:SF45 20 507 1.2E-74 T 22-04-2016 SII_RS04590 f2fe054ddb2fefbdde7bf0a3fd9f574f 511 SMART SM00382 342 501 8.8E-4 T 22-04-2016 IPR003593 AAA+ ATPase domain SII_RS04590 f2fe054ddb2fefbdde7bf0a3fd9f574f 511 SMART SM00382 28 201 1.7E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain SII_RS04590 f2fe054ddb2fefbdde7bf0a3fd9f574f 511 SUPERFAMILY SSF52540 2 198 8.89E-31 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS04590 f2fe054ddb2fefbdde7bf0a3fd9f574f 511 Gene3D G3DSA:3.40.50.300 3 254 5.8E-33 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS04590 f2fe054ddb2fefbdde7bf0a3fd9f574f 511 ProSitePatterns PS00211 ABC transporters family signature. 429 443 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SII_RS04590 f2fe054ddb2fefbdde7bf0a3fd9f574f 511 SUPERFAMILY SSF52540 301 501 2.12E-32 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS04590 f2fe054ddb2fefbdde7bf0a3fd9f574f 511 Gene3D G3DSA:3.40.50.300 316 501 1.5E-30 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS04590 f2fe054ddb2fefbdde7bf0a3fd9f574f 511 Pfam PF00005 ABC transporter 20 156 5.2E-15 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SII_RS04590 f2fe054ddb2fefbdde7bf0a3fd9f574f 511 Pfam PF00005 ABC transporter 334 456 2.5E-16 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SII_RS01055 03c6ef6100e4ceaa5a2580b686723f5e 303 PANTHER PTHR37038 5 292 7.1E-77 T 22-04-2016 SII_RS01055 03c6ef6100e4ceaa5a2580b686723f5e 303 SUPERFAMILY SSF47413 5 66 7.88E-8 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SII_RS01055 03c6ef6100e4ceaa5a2580b686723f5e 303 Gene3D G3DSA:1.10.260.40 3 66 4.7E-7 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SII_RS01055 03c6ef6100e4ceaa5a2580b686723f5e 303 TIGRFAM TIGR01716 RGG_Cterm: transcriptional activator, Rgg/GadR/MutR family, C-terminal domain 66 284 5.0E-50 T 22-04-2016 IPR010057 Transcription activator MutR, C-terminal SII_RS01055 03c6ef6100e4ceaa5a2580b686723f5e 303 PANTHER PTHR37038:SF1 5 292 7.1E-77 T 22-04-2016 SII_RS06325 0d7a9aa2a2fda01922c34c687c022bf7 387 Pfam PF13458 Periplasmic binding protein 40 378 1.5E-58 T 22-04-2016 IPR028081 Leucine-binding protein domain SII_RS06325 0d7a9aa2a2fda01922c34c687c022bf7 387 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 82 100 8.8E-8 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 SII_RS06325 0d7a9aa2a2fda01922c34c687c022bf7 387 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 345 360 8.8E-8 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 SII_RS06325 0d7a9aa2a2fda01922c34c687c022bf7 387 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 63 79 8.8E-8 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 SII_RS06325 0d7a9aa2a2fda01922c34c687c022bf7 387 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 41 57 8.8E-8 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 SII_RS06325 0d7a9aa2a2fda01922c34c687c022bf7 387 PANTHER PTHR30483:SF6 37 379 5.8E-96 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 SII_RS06325 0d7a9aa2a2fda01922c34c687c022bf7 387 SUPERFAMILY SSF53822 40 381 2.02E-82 T 22-04-2016 IPR028082 Periplasmic binding protein-like I SII_RS06325 0d7a9aa2a2fda01922c34c687c022bf7 387 PANTHER PTHR30483 37 379 5.8E-96 T 22-04-2016 SII_RS06325 0d7a9aa2a2fda01922c34c687c022bf7 387 Gene3D G3DSA:3.40.50.2300 40 236 1.1E-54 T 22-04-2016 SII_RS09060 5b89f0fdaba6024870a71e2d4c046812 151 Gene3D G3DSA:3.40.50.360 4 148 6.4E-39 T 22-04-2016 IPR029039 Flavoprotein-like domain SII_RS09060 5b89f0fdaba6024870a71e2d4c046812 151 SUPERFAMILY SSF52218 1 140 1.49E-20 T 22-04-2016 IPR029039 Flavoprotein-like domain SII_RS09060 5b89f0fdaba6024870a71e2d4c046812 151 PANTHER PTHR37297:SF1 2 149 3.7E-35 T 22-04-2016 SII_RS09060 5b89f0fdaba6024870a71e2d4c046812 151 PIRSF PIRSF005087 1 150 2.0E-37 T 22-04-2016 IPR004465 Ribonucleotide reductase Class Ib, NrdI SII_RS09060 5b89f0fdaba6024870a71e2d4c046812 151 PANTHER PTHR37297 2 149 3.7E-35 T 22-04-2016 SII_RS09060 5b89f0fdaba6024870a71e2d4c046812 151 Pfam PF07972 NrdI Flavodoxin like 5 141 7.0E-39 T 22-04-2016 IPR004465 Ribonucleotide reductase Class Ib, NrdI SII_RS00265 a6c582d04d253da56c41af553498319e 640 PRINTS PR01852 Streptococcal non-M secreted SibA protein signature 560 584 1.4E-32 T 22-04-2016 IPR009148 Streptococcal non-M secreted SibA SII_RS00265 a6c582d04d253da56c41af553498319e 640 PRINTS PR01852 Streptococcal non-M secreted SibA protein signature 603 626 1.4E-32 T 22-04-2016 IPR009148 Streptococcal non-M secreted SibA SII_RS00265 a6c582d04d253da56c41af553498319e 640 PRINTS PR01852 Streptococcal non-M secreted SibA protein signature 535 557 1.4E-32 T 22-04-2016 IPR009148 Streptococcal non-M secreted SibA SII_RS00265 a6c582d04d253da56c41af553498319e 640 SUPERFAMILY SSF54001 530 639 6.87E-23 T 22-04-2016 SII_RS00265 a6c582d04d253da56c41af553498319e 640 Pfam PF05257 CHAP domain 533 610 1.1E-13 T 22-04-2016 IPR007921 CHAP domain SII_RS00265 a6c582d04d253da56c41af553498319e 640 Pfam PF08481 GBS Bsp-like repeat 223 311 1.0E-24 T 22-04-2016 IPR013688 GBS Bsp-like SII_RS00265 a6c582d04d253da56c41af553498319e 640 Pfam PF08481 GBS Bsp-like repeat 435 515 5.0E-18 T 22-04-2016 IPR013688 GBS Bsp-like SII_RS00265 a6c582d04d253da56c41af553498319e 640 Pfam PF08481 GBS Bsp-like repeat 330 417 1.9E-25 T 22-04-2016 IPR013688 GBS Bsp-like SII_RS00265 a6c582d04d253da56c41af553498319e 640 Pfam PF08481 GBS Bsp-like repeat 151 213 1.4E-7 T 22-04-2016 IPR013688 GBS Bsp-like SII_RS00265 a6c582d04d253da56c41af553498319e 640 Pfam PF08481 GBS Bsp-like repeat 60 124 9.6E-12 T 22-04-2016 IPR013688 GBS Bsp-like SII_RS08490 7e6ce91c8b53df78221040552a70492b 278 Pfam PF13847 Methyltransferase domain 91 212 6.7E-14 T 22-04-2016 IPR025714 Methyltransferase domain SII_RS08490 7e6ce91c8b53df78221040552a70492b 278 PIRSF PIRSF018249 3 278 3.0E-86 T 22-04-2016 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted GO:0008168 SII_RS08490 7e6ce91c8b53df78221040552a70492b 278 SUPERFAMILY SSF53335 16 249 1.88E-30 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SII_RS08490 7e6ce91c8b53df78221040552a70492b 278 PANTHER PTHR10108:SF886 32 277 1.1E-60 T 22-04-2016 SII_RS08490 7e6ce91c8b53df78221040552a70492b 278 PANTHER PTHR10108 32 277 1.1E-60 T 22-04-2016 SII_RS08490 7e6ce91c8b53df78221040552a70492b 278 Gene3D G3DSA:3.40.50.150 74 225 3.3E-21 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SII_RS05060 149c2bfb2a62bd7bd1ec3fa487a82c3f 136 SUPERFAMILY SSF88659 49 135 3.55E-11 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SII_RS00460 d0cbdfb48ae1e3374868259d1a31f4b2 276 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 92 262 3.5E-20 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SII_RS00460 d0cbdfb48ae1e3374868259d1a31f4b2 276 PANTHER PTHR32243 1 276 3.0E-89 T 22-04-2016 SII_RS00460 d0cbdfb48ae1e3374868259d1a31f4b2 276 SUPERFAMILY SSF161098 9 276 6.92E-69 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SII_RS00460 d0cbdfb48ae1e3374868259d1a31f4b2 276 Gene3D G3DSA:1.10.3720.10 6 263 5.0E-63 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SII_RS02805 a2dc7ca867c6b397e6f9c7c006656f7b 325 PIRSF PIRSF000428 1 324 3.2E-102 T 22-04-2016 IPR012147 Phosphate acetyl/butyryltransferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 SII_RS02805 a2dc7ca867c6b397e6f9c7c006656f7b 325 SUPERFAMILY SSF53659 1 321 5.76E-94 T 22-04-2016 SII_RS02805 a2dc7ca867c6b397e6f9c7c006656f7b 325 TIGRFAM TIGR00651 pta: phosphate acetyltransferase 18 318 9.2E-113 T 22-04-2016 IPR004614 Phosphate acetyltransferase GO:0016407 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 SII_RS02805 a2dc7ca867c6b397e6f9c7c006656f7b 325 Gene3D G3DSA:3.40.50.10750 135 294 1.8E-65 T 22-04-2016 SII_RS02805 a2dc7ca867c6b397e6f9c7c006656f7b 325 Pfam PF01515 Phosphate acetyl/butaryl transferase 3 318 2.8E-113 T 22-04-2016 IPR002505 Phosphate acetyl/butaryl transferase GO:0008152|GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 SII_RS02805 a2dc7ca867c6b397e6f9c7c006656f7b 325 PANTHER PTHR23406 1 323 3.6E-52 T 22-04-2016 SII_RS02805 a2dc7ca867c6b397e6f9c7c006656f7b 325 PANTHER PTHR23406:SF3 1 323 3.6E-52 T 22-04-2016 SII_RS05030 ba01eebd71b09ff8af61c6e0f7feec14 378 Pfam PF04326 Putative DNA-binding domain 17 148 2.4E-12 T 22-04-2016 IPR007421 Schlafen, AAA domain GO:0005524 SII_RS07155 c129acc578a0a1552aa6bdb8e4521a54 479 Pfam PF00860 Permease family 17 159 2.7E-14 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 SII_RS07155 c129acc578a0a1552aa6bdb8e4521a54 479 Pfam PF00860 Permease family 182 438 3.3E-24 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 SII_RS07155 c129acc578a0a1552aa6bdb8e4521a54 479 PIRSF PIRSF005353 1 478 6.3E-156 T 22-04-2016 IPR026033 Purine permease PbuG-like SII_RS07155 c129acc578a0a1552aa6bdb8e4521a54 479 PANTHER PTHR11119 275 465 6.7E-131 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 SII_RS07155 c129acc578a0a1552aa6bdb8e4521a54 479 PANTHER PTHR11119 1 150 6.7E-131 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 SII_RS07155 c129acc578a0a1552aa6bdb8e4521a54 479 PANTHER PTHR11119 179 256 6.7E-131 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 SII_RS07155 c129acc578a0a1552aa6bdb8e4521a54 479 PANTHER PTHR11119:SF9 275 465 6.7E-131 T 22-04-2016 IPR029940 AzgA purine transporter GO:0005345|GO:0006863 SII_RS07155 c129acc578a0a1552aa6bdb8e4521a54 479 PANTHER PTHR11119:SF9 1 150 6.7E-131 T 22-04-2016 IPR029940 AzgA purine transporter GO:0005345|GO:0006863 SII_RS07155 c129acc578a0a1552aa6bdb8e4521a54 479 PANTHER PTHR11119:SF9 179 256 6.7E-131 T 22-04-2016 IPR029940 AzgA purine transporter GO:0005345|GO:0006863 SII_RS05515 e17bf5ae29702a7118943559122a561e 310 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 115 304 3.3E-8 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SII_RS05515 e17bf5ae29702a7118943559122a561e 310 PANTHER PTHR32243 273 310 9.5E-115 T 22-04-2016 SII_RS05515 e17bf5ae29702a7118943559122a561e 310 PANTHER PTHR32243 14 256 9.5E-115 T 22-04-2016 SII_RS05515 e17bf5ae29702a7118943559122a561e 310 PANTHER PTHR32243:SF5 273 310 9.5E-115 T 22-04-2016 SII_RS05515 e17bf5ae29702a7118943559122a561e 310 PANTHER PTHR32243:SF5 14 256 9.5E-115 T 22-04-2016 SII_RS05515 e17bf5ae29702a7118943559122a561e 310 Gene3D G3DSA:1.10.3720.10 22 297 1.7E-43 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SII_RS05515 e17bf5ae29702a7118943559122a561e 310 SUPERFAMILY SSF161098 23 309 1.72E-52 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SII_RS09360 80028502d6451a5270c25ab28e7ff675 177 Gene3D G3DSA:1.10.357.10 6 176 4.7E-20 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 SII_RS09360 80028502d6451a5270c25ab28e7ff675 177 Pfam PF00440 Bacterial regulatory proteins, tetR family 19 58 6.7E-5 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SII_RS09360 80028502d6451a5270c25ab28e7ff675 177 PANTHER PTHR30055:SF55 1 177 2.6E-42 T 22-04-2016 SII_RS09360 80028502d6451a5270c25ab28e7ff675 177 SUPERFAMILY SSF46689 6 68 1.16E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SII_RS09360 80028502d6451a5270c25ab28e7ff675 177 PANTHER PTHR30055 1 177 2.6E-42 T 22-04-2016 SII_RS08710 473de66e4a1a01e42fd94f7930831c42 121 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 9 121 6.7E-49 T 22-04-2016 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SII_RS08710 473de66e4a1a01e42fd94f7930831c42 121 Gene3D G3DSA:3.30.420.100 27 121 4.0E-40 T 22-04-2016 SII_RS08710 473de66e4a1a01e42fd94f7930831c42 121 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 9 121 29.565 T 22-04-2016 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 SII_RS08710 473de66e4a1a01e42fd94f7930831c42 121 PANTHER PTHR12899 9 121 1.4E-44 T 22-04-2016 SII_RS08710 473de66e4a1a01e42fd94f7930831c42 121 SUPERFAMILY SSF53137 10 119 1.35E-53 T 22-04-2016 SII_RS08710 473de66e4a1a01e42fd94f7930831c42 121 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 10 121 1.7E-45 T 22-04-2016 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 SII_RS01370 e510b9dfe99424e74cc8471ea0bd5f6c 252 Pfam PF12730 ABC-2 family transporter protein 5 190 3.8E-7 T 22-04-2016 IPR032688 ABC-2 family transporter protein GO:0006810 SII_RS03090 e9b78e2d25ca8ac00a0a8c7d509d7a46 385 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SII_RS03090 e9b78e2d25ca8ac00a0a8c7d509d7a46 385 Pfam PF00005 ABC transporter 23 165 2.9E-35 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SII_RS03090 e9b78e2d25ca8ac00a0a8c7d509d7a46 385 PANTHER PTHR24220 7 381 4.9E-179 T 22-04-2016 SII_RS03090 e9b78e2d25ca8ac00a0a8c7d509d7a46 385 SMART SM00382 32 215 3.0E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain SII_RS03090 e9b78e2d25ca8ac00a0a8c7d509d7a46 385 Gene3D G3DSA:3.40.50.300 3 238 1.0E-81 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS03090 e9b78e2d25ca8ac00a0a8c7d509d7a46 385 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 38 291 4.8E-107 T 22-04-2016 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 SII_RS03090 e9b78e2d25ca8ac00a0a8c7d509d7a46 385 PANTHER PTHR24220:SF150 7 381 4.9E-179 T 22-04-2016 SII_RS03090 e9b78e2d25ca8ac00a0a8c7d509d7a46 385 SUPERFAMILY SSF52540 5 248 3.46E-85 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS03090 e9b78e2d25ca8ac00a0a8c7d509d7a46 385 Pfam PF08402 TOBE domain 276 344 1.1E-5 T 22-04-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 SII_RS03090 e9b78e2d25ca8ac00a0a8c7d509d7a46 385 SUPERFAMILY SSF50331 240 345 1.64E-12 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal SII_RS01375 2aa544dd05fbf80a5ad4c65c7f8348a5 302 Pfam PF00005 ABC transporter 20 162 9.8E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SII_RS01375 2aa544dd05fbf80a5ad4c65c7f8348a5 302 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SII_RS01375 2aa544dd05fbf80a5ad4c65c7f8348a5 302 Gene3D G3DSA:3.40.50.300 2 231 1.0E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS01375 2aa544dd05fbf80a5ad4c65c7f8348a5 302 PANTHER PTHR24220 6 236 1.0E-90 T 22-04-2016 SII_RS01375 2aa544dd05fbf80a5ad4c65c7f8348a5 302 SMART SM00382 29 214 3.5E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain SII_RS01375 2aa544dd05fbf80a5ad4c65c7f8348a5 302 PANTHER PTHR24220:SF523 6 236 1.0E-90 T 22-04-2016 SII_RS01375 2aa544dd05fbf80a5ad4c65c7f8348a5 302 SUPERFAMILY SSF52540 3 226 4.07E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS01265 cc9498d0e8217e626af21492fe22b73d 69 SUPERFAMILY SSF52540 1 68 9.02E-18 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS01265 cc9498d0e8217e626af21492fe22b73d 69 Gene3D G3DSA:3.40.50.300 1 67 1.3E-17 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS01265 cc9498d0e8217e626af21492fe22b73d 69 PANTHER PTHR24220 1 68 1.6E-15 T 22-04-2016 SII_RS01265 cc9498d0e8217e626af21492fe22b73d 69 PANTHER PTHR24220:SF86 1 68 1.6E-15 T 22-04-2016 SII_RS05670 88ea2987e82c16b9db26e8330c5129d9 337 Pfam PF10282 Lactonase, 7-bladed beta-propeller 4 335 6.0E-116 T 22-04-2016 IPR019405 Lactonase, 7-bladed beta propeller KEGG: 00030+3.1.1.31|UniPathway: UPA00115 SII_RS05670 88ea2987e82c16b9db26e8330c5129d9 337 SUPERFAMILY SSF51004 14 337 4.45E-41 T 22-04-2016 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain SII_RS05670 88ea2987e82c16b9db26e8330c5129d9 337 Gene3D G3DSA:2.130.10.10 2 335 6.2E-92 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 SII_RS05670 88ea2987e82c16b9db26e8330c5129d9 337 PANTHER PTHR30344 1 335 4.6E-108 T 22-04-2016 SII_RS05670 88ea2987e82c16b9db26e8330c5129d9 337 PANTHER PTHR30344:SF1 1 335 4.6E-108 T 22-04-2016 SII_RS09490 6af0c659006eb84a05c810afd87edb2b 229 SUPERFAMILY SSF51351 2 211 1.18E-24 T 22-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 SII_RS09490 6af0c659006eb84a05c810afd87edb2b 229 Pfam PF00121 Triosephosphate isomerase 2 209 2.0E-23 T 22-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 SII_RS09490 6af0c659006eb84a05c810afd87edb2b 229 Gene3D G3DSA:3.20.20.70 2 210 2.8E-27 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SII_RS08810 e24283911f3f5a9f8406cf8e48375a3f 281 Pfam PF06161 Protein of unknown function (DUF975) 1 272 9.6E-45 T 22-04-2016 IPR010380 Protein of unknown function DUF975 SII_RS08810 e24283911f3f5a9f8406cf8e48375a3f 281 PANTHER PTHR40076 1 279 2.7E-31 T 22-04-2016 SII_RS08810 e24283911f3f5a9f8406cf8e48375a3f 281 PANTHER PTHR40076:SF1 1 279 2.7E-31 T 22-04-2016 SII_RS04150 a7af14cc2def906fc0f9af6359067f02 369 PANTHER PTHR10173 59 203 1.2E-95 T 22-04-2016 IPR028427 Peptide methionine sulfoxide reductase GO:0006979|GO:0016671|GO:0030091 SII_RS04150 a7af14cc2def906fc0f9af6359067f02 369 PANTHER PTHR10173 332 369 1.2E-95 T 22-04-2016 IPR028427 Peptide methionine sulfoxide reductase GO:0006979|GO:0016671|GO:0030091 SII_RS04150 a7af14cc2def906fc0f9af6359067f02 369 Gene3D G3DSA:2.170.150.20 222 368 3.3E-60 T 22-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 SII_RS04150 a7af14cc2def906fc0f9af6359067f02 369 Pfam PF01641 SelR domain 233 353 7.1E-47 T 22-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 SII_RS04150 a7af14cc2def906fc0f9af6359067f02 369 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 61 209 2.8E-48 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 SII_RS04150 a7af14cc2def906fc0f9af6359067f02 369 Gene3D G3DSA:3.30.1060.10 44 210 3.5E-65 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 SII_RS04150 a7af14cc2def906fc0f9af6359067f02 369 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 228 362 1.8E-62 T 22-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 SII_RS04150 a7af14cc2def906fc0f9af6359067f02 369 PANTHER PTHR10173:SF40 59 203 1.2E-95 T 22-04-2016 SII_RS04150 a7af14cc2def906fc0f9af6359067f02 369 PANTHER PTHR10173:SF40 332 369 1.2E-95 T 22-04-2016 SII_RS04150 a7af14cc2def906fc0f9af6359067f02 369 Pfam PF01625 Peptide methionine sulfoxide reductase 63 210 5.3E-56 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 SII_RS04150 a7af14cc2def906fc0f9af6359067f02 369 SUPERFAMILY SSF51316 227 368 1.05E-58 T 22-04-2016 IPR011057 Mss4-like SII_RS04150 a7af14cc2def906fc0f9af6359067f02 369 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 60 215 34.734 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 SII_RS04150 a7af14cc2def906fc0f9af6359067f02 369 SUPERFAMILY SSF55068 46 220 4.45E-61 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 SII_RS07740 75850b204fc4c489e81db6178e9bd10e 163 PANTHER PTHR33799 1 136 2.1E-49 T 22-04-2016 SII_RS07740 75850b204fc4c489e81db6178e9bd10e 163 PANTHER PTHR33799:SF6 1 136 2.1E-49 T 22-04-2016 SII_RS07740 75850b204fc4c489e81db6178e9bd10e 163 SUPERFAMILY SSF52728 5 153 2.62E-45 T 22-04-2016 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 SII_RS07740 75850b204fc4c489e81db6178e9bd10e 163 Gene3D G3DSA:3.40.35.10 5 153 1.6E-49 T 22-04-2016 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 SII_RS07740 75850b204fc4c489e81db6178e9bd10e 163 Pfam PF03830 PTS system sorbose subfamily IIB component 6 149 1.8E-45 T 22-04-2016 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 SII_RS08725 c150cb0cb578fbad5c73b1009e02c18d 61 SUPERFAMILY SSF57716 4 61 5.42E-21 T 22-04-2016 SII_RS08725 c150cb0cb578fbad5c73b1009e02c18d 61 Pfam PF00253 Ribosomal protein S14p/S29e 12 60 6.1E-24 T 22-04-2016 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SII_RS08725 c150cb0cb578fbad5c73b1009e02c18d 61 ProSitePatterns PS00527 Ribosomal protein S14 signature. 23 45 - T 22-04-2016 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 SII_RS08725 c150cb0cb578fbad5c73b1009e02c18d 61 PANTHER PTHR19836 15 61 2.6E-34 T 22-04-2016 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SII_RS08725 c150cb0cb578fbad5c73b1009e02c18d 61 Hamap MF_01364_B 30S ribosomal protein S14 type Z [rpsZ]. 1 61 25.75 T 22-04-2016 IPR023053 Ribosomal protein S14, type Z SII_RS08725 c150cb0cb578fbad5c73b1009e02c18d 61 Gene3D G3DSA:4.10.830.10 1 61 1.4E-27 T 22-04-2016 SII_RS02055 012b9243aca1bba1702ab40032412ac3 317 Gene3D G3DSA:1.10.3470.10 6 313 2.1E-68 T 22-04-2016 IPR029022 ABC transporter, BtuC-like SII_RS02055 012b9243aca1bba1702ab40032412ac3 317 Pfam PF01032 FecCD transport family 10 312 7.5E-68 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 SII_RS02055 012b9243aca1bba1702ab40032412ac3 317 PANTHER PTHR30472 1 317 2.5E-141 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 SII_RS02055 012b9243aca1bba1702ab40032412ac3 317 PANTHER PTHR30472:SF27 1 317 2.5E-141 T 22-04-2016 SII_RS02055 012b9243aca1bba1702ab40032412ac3 317 SUPERFAMILY SSF81345 6 312 9.29E-63 T 22-04-2016 IPR029022 ABC transporter, BtuC-like SII_RS02565 7b43c8e5e875eda54b401265be24b2e9 412 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 10 352 5.8E-132 T 22-04-2016 IPR016496 GTPase HflX GO:0005525 SII_RS02565 7b43c8e5e875eda54b401265be24b2e9 412 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 201 221 2.2E-8 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 SII_RS02565 7b43c8e5e875eda54b401265be24b2e9 412 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 268 286 2.2E-8 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 SII_RS02565 7b43c8e5e875eda54b401265be24b2e9 412 Gene3D G3DSA:3.40.50.300 212 355 6.9E-29 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS02565 7b43c8e5e875eda54b401265be24b2e9 412 Hamap MF_00900 GTPase HflX [hflX]. 28 384 42.616 T 22-04-2016 IPR016496 GTPase HflX GO:0005525 SII_RS02565 7b43c8e5e875eda54b401265be24b2e9 412 Gene3D G3DSA:3.40.50.300 174 211 3.3E-4 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS02565 7b43c8e5e875eda54b401265be24b2e9 412 PANTHER PTHR10229 1 399 7.5E-149 T 22-04-2016 IPR016496 GTPase HflX GO:0005525 SII_RS02565 7b43c8e5e875eda54b401265be24b2e9 412 SUPERFAMILY SSF52540 199 360 8.42E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS02565 7b43c8e5e875eda54b401265be24b2e9 412 PIRSF PIRSF006809 2 412 1.5E-136 T 22-04-2016 IPR016496 GTPase HflX GO:0005525 SII_RS02565 7b43c8e5e875eda54b401265be24b2e9 412 Pfam PF01926 50S ribosome-binding GTPase 200 318 3.9E-18 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 SII_RS02565 7b43c8e5e875eda54b401265be24b2e9 412 Pfam PF13167 GTP-binding GTPase N-terminal 27 113 5.1E-33 T 22-04-2016 IPR025121 GTPase HflX, N-terminal SII_RS02565 7b43c8e5e875eda54b401265be24b2e9 412 Pfam PF16360 GTP-binding GTPase Middle Region 115 193 2.1E-28 T 22-04-2016 IPR032305 GTP-binding protein, middle domain SII_RS08045 c8d1e4ca055106af43247f03ee3d9a6c 593 Gene3D G3DSA:3.40.50.720 117 265 2.5E-6 T 22-04-2016 IPR016040 NAD(P)-binding domain SII_RS08045 c8d1e4ca055106af43247f03ee3d9a6c 593 SUPERFAMILY SSF51735 117 277 1.13E-12 T 22-04-2016 IPR016040 NAD(P)-binding domain SII_RS06625 66e9c79943c1fc2dcaabf85f755d73f4 84 Gene3D G3DSA:1.20.58.90 1 84 7.3E-50 T 22-04-2016 SII_RS06625 66e9c79943c1fc2dcaabf85f755d73f4 84 SUPERFAMILY SSF140121 1 77 1.57E-40 T 22-04-2016 SII_RS06625 66e9c79943c1fc2dcaabf85f755d73f4 84 Pfam PF08930 Domain of unknown function (DUF1912) 1 84 8.0E-48 T 22-04-2016 IPR015026 Protein of unknown function DUF1912 SII_RS00570 4f12915796c8adf486714885da39fdc3 217 Gene3D G3DSA:1.10.357.10 36 176 3.3E-5 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 SII_RS00570 4f12915796c8adf486714885da39fdc3 217 Gene3D G3DSA:1.10.10.60 4 35 5.3E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SII_RS00570 4f12915796c8adf486714885da39fdc3 217 SUPERFAMILY SSF46689 5 69 1.9E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SII_RS05710 de724038774c92f1c22d9f752dfd964c 211 Gene3D G3DSA:3.60.15.10 13 210 8.2E-40 T 22-04-2016 IPR001279 Metallo-beta-lactamase SII_RS05710 de724038774c92f1c22d9f752dfd964c 211 PANTHER PTHR11935 3 210 4.6E-46 T 22-04-2016 SII_RS05710 de724038774c92f1c22d9f752dfd964c 211 Pfam PF00753 Metallo-beta-lactamase superfamily 15 194 1.2E-23 T 22-04-2016 IPR001279 Metallo-beta-lactamase SII_RS05710 de724038774c92f1c22d9f752dfd964c 211 SMART SM00849 13 194 1.3E-29 T 22-04-2016 IPR001279 Metallo-beta-lactamase SII_RS05710 de724038774c92f1c22d9f752dfd964c 211 PANTHER PTHR11935:SF8 3 210 4.6E-46 T 22-04-2016 SII_RS05710 de724038774c92f1c22d9f752dfd964c 211 SUPERFAMILY SSF56281 13 211 3.93E-42 T 22-04-2016 IPR001279 Metallo-beta-lactamase SII_RS04045 b3b7349ad7b58261cd223f984df66410 196 PANTHER PTHR17490 2 189 3.1E-60 T 22-04-2016 SII_RS04045 b3b7349ad7b58261cd223f984df66410 196 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 3 187 9.6E-51 T 22-04-2016 IPR006070 YrdC-like domain GO:0003725 SII_RS04045 b3b7349ad7b58261cd223f984df66410 196 Gene3D G3DSA:3.90.870.10 2 187 5.0E-60 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain SII_RS04045 b3b7349ad7b58261cd223f984df66410 196 Pfam PF01300 Telomere recombination 6 180 5.9E-46 T 22-04-2016 IPR006070 YrdC-like domain GO:0003725 SII_RS04045 b3b7349ad7b58261cd223f984df66410 196 SUPERFAMILY SSF55821 3 193 7.02E-55 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain SII_RS05935 02d81e94b5d696c067bc35a00cd0d86b 229 Pfam PF02517 CAAX protease self-immunity 127 216 1.2E-13 T 22-04-2016 IPR003675 CAAX amino terminal protease GO:0016020 SII_RS07915 56658e4f0a6ad22bb475fde65fd86075 86 Pfam PF12728 Helix-turn-helix domain 39 86 1.2E-10 T 22-04-2016 SII_RS07915 56658e4f0a6ad22bb475fde65fd86075 86 Gene3D G3DSA:1.10.10.10 37 86 9.2E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SII_RS07915 56658e4f0a6ad22bb475fde65fd86075 86 SUPERFAMILY SSF46955 38 85 4.03E-10 T 22-04-2016 IPR009061 Putative DNA-binding domain SII_RS07915 56658e4f0a6ad22bb475fde65fd86075 86 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 42 84 2.7E-10 T 22-04-2016 IPR010093 SinI-like, DNA-binding domain GO:0003677 SII_RS07650 1efaff2d5d8b0d11ecaf5a57d4354a3f 157 ProSitePatterns PS00893 Nudix box signature. 44 65 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 SII_RS07650 1efaff2d5d8b0d11ecaf5a57d4354a3f 157 Gene3D G3DSA:3.90.79.10 9 150 5.9E-26 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SII_RS07650 1efaff2d5d8b0d11ecaf5a57d4354a3f 157 Pfam PF00293 NUDIX domain 15 130 6.8E-11 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 SII_RS07650 1efaff2d5d8b0d11ecaf5a57d4354a3f 157 SUPERFAMILY SSF55811 11 139 1.62E-20 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SII_RS01445 f0354f0c17a2dece5466f5f0fc151575 116 TIGRFAM TIGR04197 T7SS_SACOL2603: type VII secretion effector, TIGR04197 family 4 88 6.4E-18 T 22-04-2016 IPR021477 Type VII secretion effector, SACOL2603 family SII_RS08925 d29f94b6a8e5c50fa9cf2d7aa6dd18dc 201 PANTHER PTHR30352 1 198 3.4E-105 T 22-04-2016 SII_RS08925 d29f94b6a8e5c50fa9cf2d7aa6dd18dc 201 SUPERFAMILY SSF102114 42 119 1.2E-8 T 22-04-2016 SII_RS08925 d29f94b6a8e5c50fa9cf2d7aa6dd18dc 201 PANTHER PTHR30352:SF2 1 198 3.4E-105 T 22-04-2016 SII_RS08925 d29f94b6a8e5c50fa9cf2d7aa6dd18dc 201 Pfam PF13353 4Fe-4S single cluster domain 30 168 2.8E-52 T 22-04-2016 SII_RS08925 d29f94b6a8e5c50fa9cf2d7aa6dd18dc 201 PIRSF PIRSF000368 11 185 9.5E-71 T 22-04-2016 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic GO:0005737|GO:0043365|GO:0051539|GO:0055114 KEGG: 00351+1.97.1.-|KEGG: 00361+1.97.1.-|KEGG: 00363+1.97.1.-|KEGG: 00625+1.97.1.- SII_RS08925 d29f94b6a8e5c50fa9cf2d7aa6dd18dc 201 Gene3D G3DSA:3.80.30.10 83 195 3.1E-14 T 22-04-2016 SII_RS08925 d29f94b6a8e5c50fa9cf2d7aa6dd18dc 201 TIGRFAM TIGR02491 NrdG: anaerobic ribonucleoside-triphosphate reductase activating protein 21 170 3.3E-60 T 22-04-2016 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic GO:0005737|GO:0043365|GO:0051539|GO:0055114 KEGG: 00351+1.97.1.-|KEGG: 00361+1.97.1.-|KEGG: 00363+1.97.1.-|KEGG: 00625+1.97.1.- SII_RS06005 727f90a6b3bb5beef27dd96810da3e51 284 Pfam PF13509 S1 domain 8 61 3.5E-10 T 22-04-2016 SII_RS06005 727f90a6b3bb5beef27dd96810da3e51 284 PANTHER PTHR37296 2 284 2.4E-109 T 22-04-2016 SII_RS06005 727f90a6b3bb5beef27dd96810da3e51 284 SUPERFAMILY SSF50249 148 218 8.03E-6 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SII_RS06005 727f90a6b3bb5beef27dd96810da3e51 284 PIRSF PIRSF012524 1 284 1.0E-112 T 22-04-2016 IPR014464 Conserved virulence factor B SII_RS07545 04c993660ea79c9a433cc9ee4ba7fe19 395 SUPERFAMILY SSF51395 3 343 3.66E-90 T 22-04-2016 SII_RS07545 04c993660ea79c9a433cc9ee4ba7fe19 395 Gene3D G3DSA:3.20.20.70 4 347 1.9E-94 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SII_RS07545 04c993660ea79c9a433cc9ee4ba7fe19 395 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 15 340 5.7E-67 T 22-04-2016 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 SII_RS07545 04c993660ea79c9a433cc9ee4ba7fe19 395 PANTHER PTHR22893:SF48 3 351 1.0E-87 T 22-04-2016 SII_RS07545 04c993660ea79c9a433cc9ee4ba7fe19 395 PANTHER PTHR22893 3 351 1.0E-87 T 22-04-2016 SII_RS02265 19995cbebf419736b7d830dd0f56047c 549 PANTHER PTHR15239 1 385 3.6E-131 T 22-04-2016 SII_RS02265 19995cbebf419736b7d830dd0f56047c 549 PANTHER PTHR15239 402 540 3.6E-131 T 22-04-2016 SII_RS02265 19995cbebf419736b7d830dd0f56047c 549 Pfam PF05833 Fibronectin-binding protein A N-terminus (FbpA) 4 426 7.0E-150 T 22-04-2016 SII_RS02265 19995cbebf419736b7d830dd0f56047c 549 Gene3D G3DSA:2.30.310.10 1 167 1.2E-62 T 22-04-2016 SII_RS02265 19995cbebf419736b7d830dd0f56047c 549 Gene3D G3DSA:3.40.970.40 239 273 1.5E-14 T 22-04-2016 SII_RS02265 19995cbebf419736b7d830dd0f56047c 549 Pfam PF05670 Domain of unknown function (DUF814) 433 518 1.6E-25 T 22-04-2016 IPR008532 Domain of unknown function DUF814 SII_RS02210 d3b01c9b7fe7a4d94c5445f80280efa8 177 Pfam PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family 75 166 8.2E-30 T 22-04-2016 IPR007269 Isoprenylcysteine carboxyl methyltransferase GO:0004671|GO:0006481|GO:0016021 SII_RS02210 d3b01c9b7fe7a4d94c5445f80280efa8 177 PANTHER PTHR12714:SF8 1 168 5.7E-12 T 22-04-2016 SII_RS02210 d3b01c9b7fe7a4d94c5445f80280efa8 177 PANTHER PTHR12714 1 168 5.7E-12 T 22-04-2016 SII_RS03320 9f1e4067a0428aed9298ad3cb36a2f4f 67 ProDom PD054970 EXCISIONASE DNA TRANSPOSON TN916 XIS TRANSPOSABLE XIS-TN FROM INTEGRATION ELEMENT 5 53 6.0E-22 T 22-04-2016 IPR015122 Excisionase from transposon Tn916 SII_RS03320 9f1e4067a0428aed9298ad3cb36a2f4f 67 Pfam PF09035 Excisionase from transposon Tn916 5 64 9.5E-20 T 22-04-2016 IPR015122 Excisionase from transposon Tn916 SII_RS03320 9f1e4067a0428aed9298ad3cb36a2f4f 67 PIRSF PIRSF004323 1 67 1.6E-46 T 22-04-2016 IPR015122 Excisionase from transposon Tn916 SII_RS08355 60971cd04dd57dc1a19a7d9bf6219fac 418 Pfam PF11187 Protein of unknown function (DUF2974) 124 267 1.5E-8 T 22-04-2016 IPR024499 Protein of unknown function DUF2974 SII_RS08355 60971cd04dd57dc1a19a7d9bf6219fac 418 Gene3D G3DSA:3.40.50.1820 71 214 6.8E-14 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SII_RS08355 60971cd04dd57dc1a19a7d9bf6219fac 418 SUPERFAMILY SSF53474 40 246 3.96E-22 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SII_RS05895 7e9b0d6c5a9d3058ea095faf6af4c7f8 72 Pfam PF10439 Bacteriocin class II with double-glycine leader peptide 6 64 1.3E-11 T 22-04-2016 IPR019493 Bacteriocin, class IIb, lactacin-related GO:0042742 SII_RS06850 a6a55113ad5a4b9b40a6ac5134f43217 420 TIGRFAM TIGR01981 sufD: FeS assembly protein SufD 132 408 8.0E-78 T 22-04-2016 IPR011542 SUF system FeS cluster assembly, SufD GO:0016226 SII_RS06850 a6a55113ad5a4b9b40a6ac5134f43217 420 PANTHER PTHR30508:SF0 1 418 3.6E-138 T 22-04-2016 SII_RS06850 a6a55113ad5a4b9b40a6ac5134f43217 420 Pfam PF01458 Uncharacterized protein family (UPF0051) 167 392 4.6E-57 T 22-04-2016 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 SII_RS06850 a6a55113ad5a4b9b40a6ac5134f43217 420 SUPERFAMILY SSF101960 4 417 4.18E-114 T 22-04-2016 SII_RS06850 a6a55113ad5a4b9b40a6ac5134f43217 420 PANTHER PTHR30508 1 418 3.6E-138 T 22-04-2016 SII_RS09425 6c572acd10ca203ffb3a86ca93285e05 198 Gene3D G3DSA:3.10.350.10 27 71 2.7E-16 T 22-04-2016 IPR018392 LysM domain SII_RS09425 6c572acd10ca203ffb3a86ca93285e05 198 Gene3D G3DSA:1.10.530.10 129 175 1.6E-8 T 22-04-2016 SII_RS09425 6c572acd10ca203ffb3a86ca93285e05 198 SUPERFAMILY SSF53955 126 177 1.1E-10 T 22-04-2016 IPR023346 Lysozyme-like domain SII_RS09425 6c572acd10ca203ffb3a86ca93285e05 198 SUPERFAMILY SSF54106 28 71 7.98E-11 T 22-04-2016 IPR018392 LysM domain SII_RS09425 6c572acd10ca203ffb3a86ca93285e05 198 Pfam PF01476 LysM domain 29 69 9.3E-14 T 22-04-2016 IPR018392 LysM domain SII_RS09425 6c572acd10ca203ffb3a86ca93285e05 198 SMART SM00257 28 72 1.3E-13 T 22-04-2016 IPR018392 LysM domain SII_RS09425 6c572acd10ca203ffb3a86ca93285e05 198 Pfam PF01464 Transglycosylase SLT domain 134 170 5.4E-5 T 22-04-2016 IPR008258 Transglycosylase SLT domain 1 SII_RS06320 865debc164a85426155174980af555f4 289 PANTHER PTHR11795 1 289 8.1E-135 T 22-04-2016 SII_RS06320 865debc164a85426155174980af555f4 289 Gene3D G3DSA:1.10.3470.10 41 200 3.5E-5 T 22-04-2016 IPR029022 ABC transporter, BtuC-like SII_RS06320 865debc164a85426155174980af555f4 289 PANTHER PTHR11795:SF371 1 289 8.1E-135 T 22-04-2016 SII_RS06320 865debc164a85426155174980af555f4 289 Pfam PF02653 Branched-chain amino acid transport system / permease component 5 273 1.1E-50 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 SII_RS02880 0ffd069b338f860593c1e02a047bdacb 301 PANTHER PTHR34184:SF1 1 301 3.1E-116 T 22-04-2016 SII_RS02880 0ffd069b338f860593c1e02a047bdacb 301 Pfam PF03773 Predicted permease 13 298 9.0E-65 T 22-04-2016 IPR005524 Predicted permease DUF318 SII_RS02880 0ffd069b338f860593c1e02a047bdacb 301 PANTHER PTHR34184 1 301 3.1E-116 T 22-04-2016 SII_RS04565 cb3ff32b9ae466a528cd6d70d4e9334c 165 PANTHER PTHR23091:SF228 8 144 2.8E-28 T 22-04-2016 SII_RS04565 cb3ff32b9ae466a528cd6d70d4e9334c 165 PANTHER PTHR23091 8 144 2.8E-28 T 22-04-2016 SII_RS04565 cb3ff32b9ae466a528cd6d70d4e9334c 165 Pfam PF00583 Acetyltransferase (GNAT) family 62 137 3.9E-16 T 22-04-2016 IPR000182 GNAT domain GO:0008080 SII_RS04565 cb3ff32b9ae466a528cd6d70d4e9334c 165 SUPERFAMILY SSF55729 9 145 6.62E-26 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SII_RS04565 cb3ff32b9ae466a528cd6d70d4e9334c 165 Gene3D G3DSA:3.40.630.30 1 157 6.4E-43 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SII_RS08000 ffb6626e247d2087fd33b07d3ff7b777 390 PANTHER PTHR23501 11 350 6.6E-13 T 22-04-2016 SII_RS08000 ffb6626e247d2087fd33b07d3ff7b777 390 SUPERFAMILY SSF103473 10 372 8.63E-40 T 22-04-2016 IPR020846 Major facilitator superfamily domain SII_RS08000 ffb6626e247d2087fd33b07d3ff7b777 390 Pfam PF07690 Major Facilitator Superfamily 11 343 1.9E-31 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SII_RS08000 ffb6626e247d2087fd33b07d3ff7b777 390 Gene3D G3DSA:1.20.1250.20 9 189 4.1E-25 T 22-04-2016 SII_RS08000 ffb6626e247d2087fd33b07d3ff7b777 390 Gene3D G3DSA:1.20.1250.20 206 376 1.5E-7 T 22-04-2016 SII_RS02905 559de075828f90e071c9a3f20d1788e6 310 Pfam PF02603 HPr Serine kinase N terminus 3 126 4.1E-38 T 22-04-2016 IPR011126 HPr(Ser) kinase/phosphorylase, N-terminal GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 SII_RS02905 559de075828f90e071c9a3f20d1788e6 310 SUPERFAMILY SSF53795 131 297 5.8E-36 T 22-04-2016 SII_RS02905 559de075828f90e071c9a3f20d1788e6 310 Gene3D G3DSA:3.40.1390.20 3 130 2.1E-44 T 22-04-2016 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like SII_RS02905 559de075828f90e071c9a3f20d1788e6 310 SUPERFAMILY SSF75138 3 130 4.05E-36 T 22-04-2016 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like SII_RS02905 559de075828f90e071c9a3f20d1788e6 310 PANTHER PTHR30305 1 309 3.6E-133 T 22-04-2016 SII_RS02905 559de075828f90e071c9a3f20d1788e6 310 TIGRFAM TIGR00679 hpr-ser: HPr(Ser) kinase/phosphatase 4 300 7.4E-108 T 22-04-2016 IPR003755 HPr(Ser) kinase/phosphorylase GO:0000155|GO:0000160|GO:0005524|GO:0006109 SII_RS02905 559de075828f90e071c9a3f20d1788e6 310 Hamap MF_01249 HPr kinase/phosphorylase [hprK]. 2 305 39.615 T 22-04-2016 IPR003755 HPr(Ser) kinase/phosphorylase GO:0000155|GO:0000160|GO:0005524|GO:0006109 SII_RS02905 559de075828f90e071c9a3f20d1788e6 310 Pfam PF07475 HPr Serine kinase C-terminal domain 129 297 8.4E-72 T 22-04-2016 IPR011104 HPr kinase/phosphorylase, C-terminal GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 SII_RS02905 559de075828f90e071c9a3f20d1788e6 310 Gene3D G3DSA:3.40.50.300 132 305 3.0E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS02905 559de075828f90e071c9a3f20d1788e6 310 PANTHER PTHR30305:SF1 1 309 3.6E-133 T 22-04-2016 SII_RS08290 258055f02e05b22a0d03d90d0f31dcbd 112 PANTHER PTHR33909 1 109 1.3E-27 T 22-04-2016 SII_RS08290 258055f02e05b22a0d03d90d0f31dcbd 112 PANTHER PTHR33909:SF1 1 109 1.3E-27 T 22-04-2016 SII_RS08290 258055f02e05b22a0d03d90d0f31dcbd 112 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 6 85 9.1E-17 T 22-04-2016 IPR003849 Preprotein translocase YajC SII_RS08290 258055f02e05b22a0d03d90d0f31dcbd 112 PRINTS PR01853 Bacterial YajC preprotein translocase signature 5 25 5.1E-5 T 22-04-2016 IPR003849 Preprotein translocase YajC SII_RS08290 258055f02e05b22a0d03d90d0f31dcbd 112 PRINTS PR01853 Bacterial YajC preprotein translocase signature 42 60 5.1E-5 T 22-04-2016 IPR003849 Preprotein translocase YajC SII_RS08290 258055f02e05b22a0d03d90d0f31dcbd 112 SMART SM01323 3 85 6.1E-29 T 22-04-2016 IPR003849 Preprotein translocase YajC SII_RS08290 258055f02e05b22a0d03d90d0f31dcbd 112 Pfam PF02699 Preprotein translocase subunit 8 82 5.9E-21 T 22-04-2016 IPR003849 Preprotein translocase YajC SII_RS06755 9ee83cdcdc7a480f8083e2d68431eaba 384 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 304 310 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 SII_RS06755 9ee83cdcdc7a480f8083e2d68431eaba 384 PANTHER PTHR18895:SF62 45 223 1.8E-100 T 22-04-2016 SII_RS06755 9ee83cdcdc7a480f8083e2d68431eaba 384 PANTHER PTHR18895:SF62 258 382 1.8E-100 T 22-04-2016 SII_RS06755 9ee83cdcdc7a480f8083e2d68431eaba 384 SUPERFAMILY SSF53335 259 375 7.52E-34 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SII_RS06755 9ee83cdcdc7a480f8083e2d68431eaba 384 SUPERFAMILY SSF53335 147 222 7.52E-34 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SII_RS06755 9ee83cdcdc7a480f8083e2d68431eaba 384 Pfam PF02926 THUMP domain 22 159 5.1E-6 T 22-04-2016 IPR004114 THUMP domain GO:0003723 SII_RS06755 9ee83cdcdc7a480f8083e2d68431eaba 384 Gene3D G3DSA:3.40.50.150 256 378 1.7E-29 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SII_RS06755 9ee83cdcdc7a480f8083e2d68431eaba 384 Gene3D G3DSA:3.40.50.150 149 219 1.7E-29 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SII_RS06755 9ee83cdcdc7a480f8083e2d68431eaba 384 SMART SM00981 58 159 8.1E-9 T 22-04-2016 IPR004114 THUMP domain GO:0003723 SII_RS06755 9ee83cdcdc7a480f8083e2d68431eaba 384 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 301 313 7.7E-5 T 22-04-2016 SII_RS06755 9ee83cdcdc7a480f8083e2d68431eaba 384 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 198 212 7.7E-5 T 22-04-2016 SII_RS06755 9ee83cdcdc7a480f8083e2d68431eaba 384 Pfam PF01170 Putative RNA methylase family UPF0020 167 371 1.1E-54 T 22-04-2016 IPR000241 Putative RNA methylase domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SII_RS06755 9ee83cdcdc7a480f8083e2d68431eaba 384 PANTHER PTHR18895 45 223 1.8E-100 T 22-04-2016 SII_RS06755 9ee83cdcdc7a480f8083e2d68431eaba 384 PANTHER PTHR18895 258 382 1.8E-100 T 22-04-2016 SII_RS06455 12507d4b0012c6f073ead6e03fa061cf 223 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 2 223 1.1E-51 T 22-04-2016 IPR011078 Uncharacterised protein family UPF0001 SII_RS06455 12507d4b0012c6f073ead6e03fa061cf 223 SUPERFAMILY SSF51419 1 222 3.49E-69 T 22-04-2016 IPR029066 PLP-binding barrel SII_RS06455 12507d4b0012c6f073ead6e03fa061cf 223 PIRSF PIRSF004848 1 223 1.6E-66 T 22-04-2016 IPR011078 Uncharacterised protein family UPF0001 SII_RS06455 12507d4b0012c6f073ead6e03fa061cf 223 Pfam PF01168 Alanine racemase, N-terminal domain 8 222 2.5E-18 T 22-04-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SII_RS06455 12507d4b0012c6f073ead6e03fa061cf 223 PANTHER PTHR10146 1 222 1.3E-75 T 22-04-2016 IPR011078 Uncharacterised protein family UPF0001 SII_RS06455 12507d4b0012c6f073ead6e03fa061cf 223 Gene3D G3DSA:3.20.20.10 2 222 3.8E-72 T 22-04-2016 IPR029066 PLP-binding barrel SII_RS03070 3727bc1fa049e4d5acb100b9e7655c4b 364 Gene3D G3DSA:3.40.50.1400 2 172 2.5E-28 T 22-04-2016 SII_RS03070 3727bc1fa049e4d5acb100b9e7655c4b 364 ProSitePatterns PS00534 Ferrochelatase signature. 164 182 - T 22-04-2016 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 SII_RS03070 3727bc1fa049e4d5acb100b9e7655c4b 364 TIGRFAM TIGR00109 hemH: ferrochelatase 2 293 9.9E-52 T 22-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 SII_RS03070 3727bc1fa049e4d5acb100b9e7655c4b 364 Pfam PF00762 Ferrochelatase 2 293 6.5E-59 T 22-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 SII_RS03070 3727bc1fa049e4d5acb100b9e7655c4b 364 Hamap MF_00323 Ferrochelatase [hemH]. 1 294 27.438 T 22-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 SII_RS03070 3727bc1fa049e4d5acb100b9e7655c4b 364 Gene3D G3DSA:3.40.50.1400 173 293 7.7E-33 T 22-04-2016 SII_RS03070 3727bc1fa049e4d5acb100b9e7655c4b 364 SUPERFAMILY SSF53800 2 293 6.54E-64 T 22-04-2016 SII_RS03070 3727bc1fa049e4d5acb100b9e7655c4b 364 PANTHER PTHR11108 2 293 1.9E-71 T 22-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 SII_RS06240 1158876c43075eb63dbdba742037f014 302 PANTHER PTHR35797:SF1 3 301 2.9E-25 T 22-04-2016 SII_RS06240 1158876c43075eb63dbdba742037f014 302 Pfam PF02517 CAAX protease self-immunity 149 246 7.1E-17 T 22-04-2016 IPR003675 CAAX amino terminal protease GO:0016020 SII_RS06240 1158876c43075eb63dbdba742037f014 302 PANTHER PTHR35797 3 301 2.9E-25 T 22-04-2016 SII_RS05485 0d4e4827f8dda97301d71ba9fa729065 207 PANTHER PTHR30408:SF8 26 203 5.0E-19 T 22-04-2016 SII_RS05485 0d4e4827f8dda97301d71ba9fa729065 207 Pfam PF02384 N-6 DNA Methylase 149 203 2.2E-20 T 22-04-2016 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 SII_RS05485 0d4e4827f8dda97301d71ba9fa729065 207 Gene3D G3DSA:3.40.50.150 150 203 5.5E-7 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SII_RS05485 0d4e4827f8dda97301d71ba9fa729065 207 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 173 189 3.2E-7 T 22-04-2016 SII_RS05485 0d4e4827f8dda97301d71ba9fa729065 207 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 196 207 3.2E-7 T 22-04-2016 SII_RS05485 0d4e4827f8dda97301d71ba9fa729065 207 PANTHER PTHR30408 26 203 5.0E-19 T 22-04-2016 SII_RS05485 0d4e4827f8dda97301d71ba9fa729065 207 Pfam PF12161 HsdM N-terminal domain 12 138 1.8E-24 T 22-04-2016 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain SII_RS05485 0d4e4827f8dda97301d71ba9fa729065 207 SUPERFAMILY SSF53335 12 203 1.57E-44 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SII_RS05295 e4dc0ab4057f397798d60a29ac0a0df6 283 Pfam PF02517 CAAX protease self-immunity 125 216 4.4E-12 T 22-04-2016 IPR003675 CAAX amino terminal protease GO:0016020 SII_RS05295 e4dc0ab4057f397798d60a29ac0a0df6 283 PANTHER PTHR39430 29 276 4.7E-23 T 22-04-2016 SII_RS01305 b3a4ed521157a42a6d8cfea9572214f0 450 PANTHER PTHR11206 2 445 1.3E-87 T 22-04-2016 SII_RS01305 b3a4ed521157a42a6d8cfea9572214f0 450 PIRSF PIRSF006603 1 450 9.8E-62 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 SII_RS01305 b3a4ed521157a42a6d8cfea9572214f0 450 PANTHER PTHR11206:SF132 2 445 1.3E-87 T 22-04-2016 SII_RS01305 b3a4ed521157a42a6d8cfea9572214f0 450 Pfam PF01554 MatE 23 184 1.6E-21 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 SII_RS06130 fab4ea8e85f7bd8847addaee3a0f58df 153 Gene3D G3DSA:3.40.630.30 1 152 3.3E-25 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SII_RS06130 fab4ea8e85f7bd8847addaee3a0f58df 153 SUPERFAMILY SSF55729 1 143 1.03E-22 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SII_RS06130 fab4ea8e85f7bd8847addaee3a0f58df 153 Pfam PF13302 Acetyltransferase (GNAT) domain 3 129 4.6E-10 T 22-04-2016 IPR000182 GNAT domain GO:0008080 SII_RS08375 24316c3c43207f215549f695a1238072 128 Pfam PF07006 Protein of unknown function (DUF1310) 9 120 3.6E-29 T 22-04-2016 IPR010738 Protein of unknown function DUF1310 SII_RS04435 1e9f5c633a8f63df5dda24b51d91bcf2 169 SUPERFAMILY SSF52540 131 166 1.04E-15 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS04435 1e9f5c633a8f63df5dda24b51d91bcf2 169 SUPERFAMILY SSF52540 1 100 1.04E-15 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS04435 1e9f5c633a8f63df5dda24b51d91bcf2 169 PANTHER PTHR37816 1 169 2.3E-45 T 22-04-2016 SII_RS04435 1e9f5c633a8f63df5dda24b51d91bcf2 169 Gene3D G3DSA:3.40.50.300 1 146 3.9E-14 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS04435 1e9f5c633a8f63df5dda24b51d91bcf2 169 PANTHER PTHR37816:SF1 1 169 2.3E-45 T 22-04-2016 SII_RS04070 d347e88f2563ca8d33f5c7a1dcad0302 445 PANTHER PTHR11206:SF153 3 444 9.9E-177 T 22-04-2016 SII_RS04070 d347e88f2563ca8d33f5c7a1dcad0302 445 Pfam PF01554 MatE 20 180 1.2E-28 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 SII_RS04070 d347e88f2563ca8d33f5c7a1dcad0302 445 Pfam PF01554 MatE 246 405 8.5E-30 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 SII_RS04070 d347e88f2563ca8d33f5c7a1dcad0302 445 TIGRFAM TIGR00797 matE: MATE efflux family protein 20 420 4.4E-79 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 SII_RS04070 d347e88f2563ca8d33f5c7a1dcad0302 445 PANTHER PTHR11206 3 444 9.9E-177 T 22-04-2016 SII_RS04070 d347e88f2563ca8d33f5c7a1dcad0302 445 PIRSF PIRSF006603 2 445 1.2E-64 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 SII_RS05860 97251e721e1658f5af8c3f9f9fff5d1f 500 PANTHER PTHR10283:SF90 324 495 7.8E-164 T 22-04-2016 SII_RS05860 97251e721e1658f5af8c3f9f9fff5d1f 500 PANTHER PTHR10283:SF90 4 281 7.8E-164 T 22-04-2016 SII_RS05860 97251e721e1658f5af8c3f9f9fff5d1f 500 Pfam PF03606 C4-dicarboxylate anaerobic carrier 11 498 4.2E-163 T 22-04-2016 IPR018385 C4-dicarboxylate anaerobic carrier-like GO:0016021 SII_RS05860 97251e721e1658f5af8c3f9f9fff5d1f 500 PANTHER PTHR10283 324 495 7.8E-164 T 22-04-2016 SII_RS05860 97251e721e1658f5af8c3f9f9fff5d1f 500 PANTHER PTHR10283 4 281 7.8E-164 T 22-04-2016 SII_RS04940 83180ea7808eba541cbb492414d37768 330 PANTHER PTHR13778:SF1 1 261 8.3E-20 T 22-04-2016 SII_RS04940 83180ea7808eba541cbb492414d37768 330 PANTHER PTHR13778 1 261 8.3E-20 T 22-04-2016 SII_RS04940 83180ea7808eba541cbb492414d37768 330 SUPERFAMILY SSF53448 1 280 4.78E-59 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SII_RS04940 83180ea7808eba541cbb492414d37768 330 Pfam PF01501 Glycosyl transferase family 8 2 257 7.0E-39 T 22-04-2016 IPR002495 Glycosyl transferase, family 8 GO:0016757 SII_RS04940 83180ea7808eba541cbb492414d37768 330 Gene3D G3DSA:3.90.550.10 1 281 1.4E-68 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SII_RS05510 b821d83c4ace3234096d3fa319ee4547 493 SUPERFAMILY SSF53850 23 488 1.39E-76 T 22-04-2016 SII_RS05510 b821d83c4ace3234096d3fa319ee4547 493 Pfam PF13416 Bacterial extracellular solute-binding protein 72 347 6.0E-14 T 22-04-2016 SII_RS05510 b821d83c4ace3234096d3fa319ee4547 493 PANTHER PTHR30061 1 349 1.7E-17 T 22-04-2016 SII_RS05510 b821d83c4ace3234096d3fa319ee4547 493 Gene3D G3DSA:3.40.190.10 435 488 1.5E-25 T 22-04-2016 SII_RS05510 b821d83c4ace3234096d3fa319ee4547 493 Gene3D G3DSA:3.40.190.10 165 356 1.5E-25 T 22-04-2016 SII_RS05510 b821d83c4ace3234096d3fa319ee4547 493 Gene3D G3DSA:3.40.190.10 70 157 1.8E-18 T 22-04-2016 SII_RS05510 b821d83c4ace3234096d3fa319ee4547 493 Pfam PF12010 Domain of unknown function (DUF3502) 357 490 1.8E-31 T 22-04-2016 IPR022627 Domain of unknown function DUF3502 SII_RS07900 68654f9a2423b04a8a6c04b6f0fb89be 179 Pfam PF13630 SdpI/YhfL protein family 103 169 2.6E-11 T 22-04-2016 IPR025962 SdpI/YhfL protein family SII_RS04505 171ae51e8044c167206b3c4b3dd2e7ec 831 Pfam PF13516 Leucine Rich repeat 679 694 0.59 T 22-04-2016 IPR001611 Leucine-rich repeat GO:0005515 SII_RS04505 171ae51e8044c167206b3c4b3dd2e7ec 831 Gene3D G3DSA:3.80.10.10 409 556 2.1E-30 T 22-04-2016 IPR032675 Leucine-rich repeat domain, L domain-like SII_RS04505 171ae51e8044c167206b3c4b3dd2e7ec 831 Gene3D G3DSA:3.80.10.10 557 695 1.1E-18 T 22-04-2016 IPR032675 Leucine-rich repeat domain, L domain-like SII_RS04505 171ae51e8044c167206b3c4b3dd2e7ec 831 PANTHER PTHR24365 408 693 1.2E-33 T 22-04-2016 SII_RS04505 171ae51e8044c167206b3c4b3dd2e7ec 831 SUPERFAMILY SSF142887 209 255 1.03E-13 T 22-04-2016 SII_RS04505 171ae51e8044c167206b3c4b3dd2e7ec 831 SUPERFAMILY SSF142887 59 107 6.8E-12 T 22-04-2016 SII_RS04505 171ae51e8044c167206b3c4b3dd2e7ec 831 SUPERFAMILY SSF52058 391 694 3.23E-43 T 22-04-2016 IPR032675 Leucine-rich repeat domain, L domain-like SII_RS04505 171ae51e8044c167206b3c4b3dd2e7ec 831 TIGRFAM TIGR01363 strep_his_triad: streptococcal histidine triad protein 127 197 3.4E-10 T 22-04-2016 IPR023832 Histidine triad protein SII_RS04505 171ae51e8044c167206b3c4b3dd2e7ec 831 SUPERFAMILY SSF142887 127 165 4.45E-13 T 22-04-2016 SII_RS04505 171ae51e8044c167206b3c4b3dd2e7ec 831 SMART SM00365 679 699 290.0 T 22-04-2016 SII_RS04505 171ae51e8044c167206b3c4b3dd2e7ec 831 SMART SM00365 460 478 740.0 T 22-04-2016 SII_RS04505 171ae51e8044c167206b3c4b3dd2e7ec 831 SMART SM00365 504 525 330.0 T 22-04-2016 SII_RS04505 171ae51e8044c167206b3c4b3dd2e7ec 831 SMART SM00365 526 547 360.0 T 22-04-2016 SII_RS04505 171ae51e8044c167206b3c4b3dd2e7ec 831 SMART SM00365 635 656 19.0 T 22-04-2016 SII_RS04505 171ae51e8044c167206b3c4b3dd2e7ec 831 SMART SM00365 591 612 6.8 T 22-04-2016 SII_RS04505 171ae51e8044c167206b3c4b3dd2e7ec 831 Pfam PF04270 Streptococcal histidine triad protein 129 163 5.9E-13 T 22-04-2016 IPR006270 Streptococcal histidine triad repeat SII_RS04505 171ae51e8044c167206b3c4b3dd2e7ec 831 Pfam PF04270 Streptococcal histidine triad protein 313 328 4.0 T 22-04-2016 IPR006270 Streptococcal histidine triad repeat SII_RS04505 171ae51e8044c167206b3c4b3dd2e7ec 831 Pfam PF04270 Streptococcal histidine triad protein 213 249 1.9E-6 T 22-04-2016 IPR006270 Streptococcal histidine triad repeat SII_RS04505 171ae51e8044c167206b3c4b3dd2e7ec 831 Pfam PF04270 Streptococcal histidine triad protein 63 105 8.7E-7 T 22-04-2016 IPR006270 Streptococcal histidine triad repeat SII_RS09300 1f85ee7e3155cfa140dc48c804984a89 333 Pfam PF13349 Putative adhesin 101 332 4.2E-33 T 22-04-2016 IPR025164 Putative adhesin SII_RS09300 1f85ee7e3155cfa140dc48c804984a89 333 Pfam PF08006 Protein of unknown function (DUF1700) 1 71 5.4E-7 T 22-04-2016 IPR012963 Protein of unknown function DUF1700 SII_RS08465 9a7b34eb57b7df4dd708b9ee24abcd7b 398 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 8 397 39.425 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SII_RS08465 9a7b34eb57b7df4dd708b9ee24abcd7b 398 Pfam PF00162 Phosphoglycerate kinase 6 387 3.1E-145 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SII_RS08465 9a7b34eb57b7df4dd708b9ee24abcd7b 398 Gene3D G3DSA:3.40.50.1260 4 185 2.2E-67 T 22-04-2016 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SII_RS08465 9a7b34eb57b7df4dd708b9ee24abcd7b 398 PRINTS PR00477 Phosphoglycerate kinase family signature 10 26 8.1E-92 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SII_RS08465 9a7b34eb57b7df4dd708b9ee24abcd7b 398 PRINTS PR00477 Phosphoglycerate kinase family signature 373 390 8.1E-92 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SII_RS08465 9a7b34eb57b7df4dd708b9ee24abcd7b 398 PRINTS PR00477 Phosphoglycerate kinase family signature 31 53 8.1E-92 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SII_RS08465 9a7b34eb57b7df4dd708b9ee24abcd7b 398 PRINTS PR00477 Phosphoglycerate kinase family signature 316 341 8.1E-92 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SII_RS08465 9a7b34eb57b7df4dd708b9ee24abcd7b 398 PRINTS PR00477 Phosphoglycerate kinase family signature 174 196 8.1E-92 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SII_RS08465 9a7b34eb57b7df4dd708b9ee24abcd7b 398 PRINTS PR00477 Phosphoglycerate kinase family signature 197 216 8.1E-92 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SII_RS08465 9a7b34eb57b7df4dd708b9ee24abcd7b 398 PRINTS PR00477 Phosphoglycerate kinase family signature 143 165 8.1E-92 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SII_RS08465 9a7b34eb57b7df4dd708b9ee24abcd7b 398 PRINTS PR00477 Phosphoglycerate kinase family signature 350 361 8.1E-92 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SII_RS08465 9a7b34eb57b7df4dd708b9ee24abcd7b 398 PRINTS PR00477 Phosphoglycerate kinase family signature 110 125 8.1E-92 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SII_RS08465 9a7b34eb57b7df4dd708b9ee24abcd7b 398 PIRSF PIRSF000724 1 398 3.2E-130 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SII_RS08465 9a7b34eb57b7df4dd708b9ee24abcd7b 398 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 15 25 - T 22-04-2016 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SII_RS08465 9a7b34eb57b7df4dd708b9ee24abcd7b 398 Gene3D G3DSA:3.40.50.1270 186 385 1.6E-76 T 22-04-2016 IPR015901 Phosphoglycerate kinase, C-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SII_RS08465 9a7b34eb57b7df4dd708b9ee24abcd7b 398 SUPERFAMILY SSF53748 3 397 2.71E-142 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SII_RS08465 9a7b34eb57b7df4dd708b9ee24abcd7b 398 PANTHER PTHR11406 1 398 7.6E-202 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SII_RS09240 9bfb2516c6720422582a9695123800df 389 PANTHER PTHR23523:SF2 1 388 2.0E-122 T 22-04-2016 SII_RS09240 9bfb2516c6720422582a9695123800df 389 Gene3D G3DSA:1.20.1250.20 14 178 1.4E-14 T 22-04-2016 SII_RS09240 9bfb2516c6720422582a9695123800df 389 Pfam PF07690 Major Facilitator Superfamily 17 348 6.1E-25 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SII_RS09240 9bfb2516c6720422582a9695123800df 389 SUPERFAMILY SSF103473 8 382 2.62E-42 T 22-04-2016 IPR020846 Major facilitator superfamily domain SII_RS09240 9bfb2516c6720422582a9695123800df 389 PANTHER PTHR23523 1 388 2.0E-122 T 22-04-2016 SII_RS09240 9bfb2516c6720422582a9695123800df 389 Gene3D G3DSA:1.20.1250.20 192 385 1.6E-18 T 22-04-2016 SII_RS04460 a5fe6e1b0b88b30b1ec486e478034a9c 246 Gene3D G3DSA:3.40.50.1820 5 239 8.0E-12 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SII_RS04460 a5fe6e1b0b88b30b1ec486e478034a9c 246 SUPERFAMILY SSF53474 5 239 8.35E-14 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SII_RS05640 98b256165ab9fd6503843f30e3d50692 233 Gene3D G3DSA:3.40.50.300 3 217 7.2E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS05640 98b256165ab9fd6503843f30e3d50692 233 SUPERFAMILY SSF52540 4 221 1.77E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS05640 98b256165ab9fd6503843f30e3d50692 233 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SII_RS05640 98b256165ab9fd6503843f30e3d50692 233 PANTHER PTHR24220:SF577 5 224 3.6E-100 T 22-04-2016 SII_RS05640 98b256165ab9fd6503843f30e3d50692 233 SMART SM00382 32 215 3.4E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain SII_RS05640 98b256165ab9fd6503843f30e3d50692 233 Pfam PF00005 ABC transporter 24 166 6.5E-36 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SII_RS05640 98b256165ab9fd6503843f30e3d50692 233 PANTHER PTHR24220 5 224 3.6E-100 T 22-04-2016 SII_RS02560 0147da0f6e1f3a797483270e789f0eee 294 Gene3D G3DSA:1.10.287.890 188 267 2.4E-31 T 22-04-2016 SII_RS02560 0147da0f6e1f3a797483270e789f0eee 294 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 5 274 2.8E-78 T 22-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 SII_RS02560 0147da0f6e1f3a797483270e789f0eee 294 SUPERFAMILY SSF52540 5 121 6.57E-18 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS02560 0147da0f6e1f3a797483270e789f0eee 294 Pfam PF01715 IPP transferase 38 269 1.1E-70 T 22-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 SII_RS02560 0147da0f6e1f3a797483270e789f0eee 294 SUPERFAMILY SSF52540 1 78 1.67E-11 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS02560 0147da0f6e1f3a797483270e789f0eee 294 SUPERFAMILY SSF52540 130 253 1.67E-11 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS02560 0147da0f6e1f3a797483270e789f0eee 294 Gene3D G3DSA:3.40.50.300 2 165 6.1E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS02560 0147da0f6e1f3a797483270e789f0eee 294 PANTHER PTHR11088 1 278 8.2E-106 T 22-04-2016 SII_RS02560 0147da0f6e1f3a797483270e789f0eee 294 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 5 293 27.945 T 22-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 SII_RS06315 c8e92c8e1a3ff0e69e28ad52ce4fe144 316 PANTHER PTHR30482:SF10 1 314 8.1E-120 T 22-04-2016 SII_RS06315 c8e92c8e1a3ff0e69e28ad52ce4fe144 316 Pfam PF02653 Branched-chain amino acid transport system / permease component 36 290 2.7E-42 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 SII_RS06315 c8e92c8e1a3ff0e69e28ad52ce4fe144 316 PANTHER PTHR30482 1 314 8.1E-120 T 22-04-2016 SII_RS05160 198a6c19dfa505e28d74e51b9a68fdb2 71 Pfam PF12750 Maff2 family 1 70 2.6E-39 T 22-04-2016 IPR024272 MAFF2-related SII_RS04185 76f094f60eb7a9f31cfc8556a4a8d7b2 125 SUPERFAMILY SSF81330 10 118 4.58E-25 T 22-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 SII_RS04185 76f094f60eb7a9f31cfc8556a4a8d7b2 125 PANTHER PTHR30266 1 125 1.6E-32 T 22-04-2016 SII_RS04185 76f094f60eb7a9f31cfc8556a4a8d7b2 125 PANTHER PTHR30266:SF2 1 125 1.6E-32 T 22-04-2016 SII_RS04185 76f094f60eb7a9f31cfc8556a4a8d7b2 125 Pfam PF01741 Large-conductance mechanosensitive channel, MscL 1 122 1.4E-32 T 22-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 SII_RS04185 76f094f60eb7a9f31cfc8556a4a8d7b2 125 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 84 93 2.5E-6 T 22-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 SII_RS04185 76f094f60eb7a9f31cfc8556a4a8d7b2 125 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 4 18 2.5E-6 T 22-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 SII_RS04185 76f094f60eb7a9f31cfc8556a4a8d7b2 125 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 75 83 2.5E-6 T 22-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 SII_RS04185 76f094f60eb7a9f31cfc8556a4a8d7b2 125 TIGRFAM TIGR00220 mscL: large conductance mechanosensitive channel protein 1 124 8.8E-29 T 22-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 SII_RS06980 12c24c14e651ba0529f696c207924624 327 ProSitePatterns PS01348 MraY family signature 2. 164 175 - T 22-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 SII_RS06980 12c24c14e651ba0529f696c207924624 327 Pfam PF00953 Glycosyl transferase family 4 80 244 1.3E-36 T 22-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 SII_RS06980 12c24c14e651ba0529f696c207924624 327 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 46 58 5.1E-5 T 22-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 SII_RS06980 12c24c14e651ba0529f696c207924624 327 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 3 326 22.204 T 22-04-2016 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 SII_RS06980 12c24c14e651ba0529f696c207924624 327 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 20 324 5.8E-77 T 22-04-2016 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 SII_RS06980 12c24c14e651ba0529f696c207924624 327 PANTHER PTHR22926:SF5 1 327 2.6E-124 T 22-04-2016 SII_RS06980 12c24c14e651ba0529f696c207924624 327 PANTHER PTHR22926 1 327 2.6E-124 T 22-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 SII_RS06520 01f35b16c8e043bf9ebbb4eaff27b247 172 PANTHER PTHR36834 17 169 1.0E-24 T 22-04-2016 SII_RS06520 01f35b16c8e043bf9ebbb4eaff27b247 172 PANTHER PTHR36834:SF1 17 169 1.0E-24 T 22-04-2016 SII_RS06520 01f35b16c8e043bf9ebbb4eaff27b247 172 Pfam PF04892 VanZ like family 27 164 1.3E-19 T 22-04-2016 IPR006976 VanZ-like SII_RS04885 88233ae5af415bf43f34aa3329fb9077 555 Pfam PF05045 Rhamnan synthesis protein F 34 506 9.5E-119 T 22-04-2016 IPR007739 Rhamnan synthesis F SII_RS02590 00d350aaf37cb26532004d5ad890c75b 243 Gene3D G3DSA:3.40.50.150 18 235 1.2E-24 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SII_RS02590 00d350aaf37cb26532004d5ad890c75b 243 Pfam PF08241 Methyltransferase domain 35 123 9.0E-16 T 22-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 SII_RS02590 00d350aaf37cb26532004d5ad890c75b 243 PANTHER PTHR10108:SF750 18 142 1.3E-16 T 22-04-2016 SII_RS02590 00d350aaf37cb26532004d5ad890c75b 243 PANTHER PTHR10108 18 142 1.3E-16 T 22-04-2016 SII_RS02590 00d350aaf37cb26532004d5ad890c75b 243 SUPERFAMILY SSF53335 6 129 7.21E-25 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SII_RS00590 4fee7a095a090eb9abdcfab80b55e8e8 532 SUPERFAMILY SSF56978 58 526 1.96E-193 T 22-04-2016 IPR001869 Thiol-activated cytolysin GO:0009405|GO:0015485 SII_RS00590 4fee7a095a090eb9abdcfab80b55e8e8 532 Gene3D G3DSA:3.90.840.10 378 400 1.6E-66 T 22-04-2016 IPR001869 Thiol-activated cytolysin GO:0009405|GO:0015485 SII_RS00590 4fee7a095a090eb9abdcfab80b55e8e8 532 Gene3D G3DSA:3.90.840.10 249 302 1.6E-66 T 22-04-2016 IPR001869 Thiol-activated cytolysin GO:0009405|GO:0015485 SII_RS00590 4fee7a095a090eb9abdcfab80b55e8e8 532 Gene3D G3DSA:3.90.840.10 127 198 1.6E-66 T 22-04-2016 IPR001869 Thiol-activated cytolysin GO:0009405|GO:0015485 SII_RS00590 4fee7a095a090eb9abdcfab80b55e8e8 532 Gene3D G3DSA:3.90.840.10 59 79 1.6E-66 T 22-04-2016 IPR001869 Thiol-activated cytolysin GO:0009405|GO:0015485 SII_RS00590 4fee7a095a090eb9abdcfab80b55e8e8 532 PRINTS PR01400 Bacterial thiol-activated pore-forming cytolysin signature 425 442 2.2E-84 T 22-04-2016 IPR001869 Thiol-activated cytolysin GO:0009405|GO:0015485 SII_RS00590 4fee7a095a090eb9abdcfab80b55e8e8 532 PRINTS PR01400 Bacterial thiol-activated pore-forming cytolysin signature 71 88 2.2E-84 T 22-04-2016 IPR001869 Thiol-activated cytolysin GO:0009405|GO:0015485 SII_RS00590 4fee7a095a090eb9abdcfab80b55e8e8 532 PRINTS PR01400 Bacterial thiol-activated pore-forming cytolysin signature 500 520 2.2E-84 T 22-04-2016 IPR001869 Thiol-activated cytolysin GO:0009405|GO:0015485 SII_RS00590 4fee7a095a090eb9abdcfab80b55e8e8 532 PRINTS PR01400 Bacterial thiol-activated pore-forming cytolysin signature 204 219 2.2E-84 T 22-04-2016 IPR001869 Thiol-activated cytolysin GO:0009405|GO:0015485 SII_RS00590 4fee7a095a090eb9abdcfab80b55e8e8 532 PRINTS PR01400 Bacterial thiol-activated pore-forming cytolysin signature 386 413 2.2E-84 T 22-04-2016 IPR001869 Thiol-activated cytolysin GO:0009405|GO:0015485 SII_RS00590 4fee7a095a090eb9abdcfab80b55e8e8 532 PRINTS PR01400 Bacterial thiol-activated pore-forming cytolysin signature 101 123 2.2E-84 T 22-04-2016 IPR001869 Thiol-activated cytolysin GO:0009405|GO:0015485 SII_RS00590 4fee7a095a090eb9abdcfab80b55e8e8 532 PRINTS PR01400 Bacterial thiol-activated pore-forming cytolysin signature 145 163 2.2E-84 T 22-04-2016 IPR001869 Thiol-activated cytolysin GO:0009405|GO:0015485 SII_RS00590 4fee7a095a090eb9abdcfab80b55e8e8 532 PRINTS PR01400 Bacterial thiol-activated pore-forming cytolysin signature 285 308 2.2E-84 T 22-04-2016 IPR001869 Thiol-activated cytolysin GO:0009405|GO:0015485 SII_RS00590 4fee7a095a090eb9abdcfab80b55e8e8 532 PRINTS PR01400 Bacterial thiol-activated pore-forming cytolysin signature 129 145 2.2E-84 T 22-04-2016 IPR001869 Thiol-activated cytolysin GO:0009405|GO:0015485 SII_RS00590 4fee7a095a090eb9abdcfab80b55e8e8 532 PRINTS PR01400 Bacterial thiol-activated pore-forming cytolysin signature 338 355 2.2E-84 T 22-04-2016 IPR001869 Thiol-activated cytolysin GO:0009405|GO:0015485 SII_RS00590 4fee7a095a090eb9abdcfab80b55e8e8 532 PRINTS PR01400 Bacterial thiol-activated pore-forming cytolysin signature 442 458 2.2E-84 T 22-04-2016 IPR001869 Thiol-activated cytolysin GO:0009405|GO:0015485 SII_RS00590 4fee7a095a090eb9abdcfab80b55e8e8 532 Gene3D G3DSA:2.60.40.1430 418 526 4.7E-41 T 22-04-2016 SII_RS00590 4fee7a095a090eb9abdcfab80b55e8e8 532 Pfam PF01289 Thiol-activated cytolysin 64 522 1.2E-187 T 22-04-2016 IPR001869 Thiol-activated cytolysin GO:0009405|GO:0015485 SII_RS00590 4fee7a095a090eb9abdcfab80b55e8e8 532 Gene3D G3DSA:3.30.1040.20 80 126 8.8E-25 T 22-04-2016 SII_RS01795 69290fd9985ffa225e6cb9c136ddd597 154 PANTHER PTHR22769:SF30 6 154 3.1E-26 T 22-04-2016 SII_RS01795 69290fd9985ffa225e6cb9c136ddd597 154 SUPERFAMILY SSF55811 3 140 1.62E-27 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SII_RS01795 69290fd9985ffa225e6cb9c136ddd597 154 ProSitePatterns PS00893 Nudix box signature. 42 63 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 SII_RS01795 69290fd9985ffa225e6cb9c136ddd597 154 Gene3D G3DSA:3.90.79.10 5 143 5.4E-27 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SII_RS01795 69290fd9985ffa225e6cb9c136ddd597 154 Pfam PF00293 NUDIX domain 13 125 2.5E-16 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 SII_RS01795 69290fd9985ffa225e6cb9c136ddd597 154 PANTHER PTHR22769 6 154 3.1E-26 T 22-04-2016 SII_RS06905 2d775378c2208fbcf529331432f6ca18 366 PANTHER PTHR24421 10 361 5.4E-61 T 22-04-2016 SII_RS06905 2d775378c2208fbcf529331432f6ca18 366 Gene3D G3DSA:3.30.565.10 243 324 1.2E-5 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SII_RS06905 2d775378c2208fbcf529331432f6ca18 366 PANTHER PTHR24421:SF10 10 361 5.4E-61 T 22-04-2016 SII_RS06905 2d775378c2208fbcf529331432f6ca18 366 SUPERFAMILY SSF55874 243 361 7.6E-9 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SII_RS06905 2d775378c2208fbcf529331432f6ca18 366 Pfam PF07730 Histidine kinase 175 242 5.3E-17 T 22-04-2016 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 SII_RS00900 024e980f5d746339ac7a0989a16c0636 93 Pfam PF14021 Protein of unknown function (DUF4237) 1 91 1.3E-9 T 22-04-2016 IPR025331 Protein of unknown function DUF4237 SII_RS00050 d39348d14111f1c1aa552a87fb28e177 426 Gene3D G3DSA:3.40.710.10 180 425 1.3E-49 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SII_RS00050 d39348d14111f1c1aa552a87fb28e177 426 Pfam PF13354 Beta-lactamase enzyme family 211 403 9.5E-34 T 22-04-2016 SII_RS00050 d39348d14111f1c1aa552a87fb28e177 426 SUPERFAMILY SSF56601 189 424 1.8E-32 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SII_RS07635 3121570a733230391d5cf45ae3fcaf25 157 PANTHER PTHR37815 1 149 3.4E-34 T 22-04-2016 SII_RS07635 3121570a733230391d5cf45ae3fcaf25 157 Pfam PF07155 ECF-type riboflavin transporter, S component 3 149 1.7E-30 T 22-04-2016 IPR009825 ECF transporter, substrate-specific component-like GO:0016020 SII_RS07635 3121570a733230391d5cf45ae3fcaf25 157 PANTHER PTHR37815:SF1 1 149 3.4E-34 T 22-04-2016 SII_RS07000 1147446b1a19aed036fba0175a4ef600 65 PANTHER PTHR10245 8 63 6.7E-15 T 22-04-2016 SII_RS07000 1147446b1a19aed036fba0175a4ef600 65 SMART SM00530 3 58 2.7E-13 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SII_RS07000 1147446b1a19aed036fba0175a4ef600 65 Pfam PF01381 Helix-turn-helix 4 56 6.3E-15 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SII_RS07000 1147446b1a19aed036fba0175a4ef600 65 PANTHER PTHR10245:SF56 8 63 6.7E-15 T 22-04-2016 SII_RS07000 1147446b1a19aed036fba0175a4ef600 65 SUPERFAMILY SSF47413 2 61 1.37E-17 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SII_RS07000 1147446b1a19aed036fba0175a4ef600 65 Gene3D G3DSA:1.10.260.40 2 62 3.2E-22 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SII_RS00425 f5691071069587f0964659eb445cb711 142 Gene3D G3DSA:3.40.50.270 1 141 6.7E-42 T 22-04-2016 SII_RS00425 f5691071069587f0964659eb445cb711 142 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 76 91 2.6E-14 T 22-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 SII_RS00425 f5691071069587f0964659eb445cb711 142 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 111 126 2.6E-14 T 22-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 SII_RS00425 f5691071069587f0964659eb445cb711 142 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 4 21 2.6E-14 T 22-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 SII_RS00425 f5691071069587f0964659eb445cb711 142 PANTHER PTHR11717:SF7 1 141 3.1E-38 T 22-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 SII_RS00425 f5691071069587f0964659eb445cb711 142 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 4 135 2.4E-27 T 22-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily SII_RS00425 f5691071069587f0964659eb445cb711 142 PANTHER PTHR11717 1 141 3.1E-38 T 22-04-2016 SII_RS00425 f5691071069587f0964659eb445cb711 142 SMART SM00226 2 137 3.0E-29 T 22-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily SII_RS00425 f5691071069587f0964659eb445cb711 142 SUPERFAMILY SSF52788 1 138 3.79E-42 T 22-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily SII_RS01775 1a8db70d69f2f5c506f8a72d99d0d3d2 174 SUPERFAMILY SSF55729 8 157 1.86E-22 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SII_RS01775 1a8db70d69f2f5c506f8a72d99d0d3d2 174 PANTHER PTHR23091 86 157 4.0E-17 T 22-04-2016 SII_RS01775 1a8db70d69f2f5c506f8a72d99d0d3d2 174 PANTHER PTHR23091 1 70 4.0E-17 T 22-04-2016 SII_RS01775 1a8db70d69f2f5c506f8a72d99d0d3d2 174 Gene3D G3DSA:3.40.630.30 7 166 1.2E-29 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SII_RS01775 1a8db70d69f2f5c506f8a72d99d0d3d2 174 Pfam PF13673 Acetyltransferase (GNAT) domain 22 148 3.9E-8 T 22-04-2016 IPR000182 GNAT domain GO:0008080 SII_RS06505 69be527c98336e18c7cc01bb5562106f 74 PANTHER PTHR41311 1 73 3.8E-22 T 22-04-2016 SII_RS06505 69be527c98336e18c7cc01bb5562106f 74 Gene3D G3DSA:1.10.287.760 1 66 1.2E-31 T 22-04-2016 IPR023164 YqgQ-like domain SII_RS06505 69be527c98336e18c7cc01bb5562106f 74 Pfam PF06014 Bacterial protein of unknown function (DUF910) 1 61 7.8E-29 T 22-04-2016 IPR009256 Protein of unknown function DUF910 SII_RS06505 69be527c98336e18c7cc01bb5562106f 74 SUPERFAMILY SSF158379 1 62 1.16E-23 T 22-04-2016 IPR023164 YqgQ-like domain SII_RS04380 819d09b698e21d9dded6724d538f54a0 215 TIGRFAM TIGR01065 hlyIII: channel protein, hemolysin III family 15 213 1.1E-63 T 22-04-2016 IPR005744 Hly-III GO:0016021|GO:0019835 SII_RS04380 819d09b698e21d9dded6724d538f54a0 215 PANTHER PTHR20855:SF3 15 215 4.5E-53 T 22-04-2016 IPR005744 Hly-III GO:0016021|GO:0019835 SII_RS04380 819d09b698e21d9dded6724d538f54a0 215 PANTHER PTHR20855 15 215 4.5E-53 T 22-04-2016 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 SII_RS04380 819d09b698e21d9dded6724d538f54a0 215 Pfam PF03006 Haemolysin-III related 14 208 1.6E-31 T 22-04-2016 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 SII_RS06055 64ec8426f0750673d83d78f9e1c5cb66 69 Pfam PF17032 zinc-ribbon family 20 67 2.1E-6 T 22-04-2016 IPR031493 Zinc-ribbon 15 SII_RS06150 d7cd415395276bf7291913f28993ca68 255 SMART SM00382 34 222 4.6E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain SII_RS06150 d7cd415395276bf7291913f28993ca68 255 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SII_RS06150 d7cd415395276bf7291913f28993ca68 255 PANTHER PTHR24220:SF494 5 252 3.3E-105 T 22-04-2016 SII_RS06150 d7cd415395276bf7291913f28993ca68 255 PANTHER PTHR24220 5 252 3.3E-105 T 22-04-2016 SII_RS06150 d7cd415395276bf7291913f28993ca68 255 SUPERFAMILY SSF52540 3 225 1.33E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS06150 d7cd415395276bf7291913f28993ca68 255 Gene3D G3DSA:3.40.50.300 2 223 2.7E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS06150 d7cd415395276bf7291913f28993ca68 255 Pfam PF00005 ABC transporter 25 173 5.9E-35 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SII_RS06185 d7cd415395276bf7291913f28993ca68 255 SMART SM00382 34 222 4.6E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain SII_RS06185 d7cd415395276bf7291913f28993ca68 255 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SII_RS06185 d7cd415395276bf7291913f28993ca68 255 PANTHER PTHR24220:SF494 5 252 3.3E-105 T 22-04-2016 SII_RS06185 d7cd415395276bf7291913f28993ca68 255 PANTHER PTHR24220 5 252 3.3E-105 T 22-04-2016 SII_RS06185 d7cd415395276bf7291913f28993ca68 255 SUPERFAMILY SSF52540 3 225 1.33E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS06185 d7cd415395276bf7291913f28993ca68 255 Gene3D G3DSA:3.40.50.300 2 223 2.7E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS06185 d7cd415395276bf7291913f28993ca68 255 Pfam PF00005 ABC transporter 25 173 5.9E-35 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SII_RS08315 8b9b48d259d774aaf1ea5ce255f9b25c 287 Pfam PF01261 Xylose isomerase-like TIM barrel 23 233 9.4E-37 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain SII_RS08315 8b9b48d259d774aaf1ea5ce255f9b25c 287 Gene3D G3DSA:3.20.20.150 5 277 1.2E-48 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain SII_RS08315 8b9b48d259d774aaf1ea5ce255f9b25c 287 SUPERFAMILY SSF51658 11 284 4.45E-60 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain SII_RS08315 8b9b48d259d774aaf1ea5ce255f9b25c 287 PANTHER PTHR12110 4 286 3.3E-103 T 22-04-2016 SII_RS08315 8b9b48d259d774aaf1ea5ce255f9b25c 287 PANTHER PTHR12110:SF20 4 286 3.3E-103 T 22-04-2016 SII_RS08315 8b9b48d259d774aaf1ea5ce255f9b25c 287 TIGRFAM TIGR00542 hxl6Piso_put: putative hexulose-6-phosphate isomerase 3 286 1.5E-112 T 22-04-2016 IPR004560 L-ribulose-5-phosphate 3-epimerase GO:0005975|GO:0016861 KEGG: 00053+5.1.3.22|MetaCyc: PWY-6961|UniPathway: UPA00263 SII_RS03945 c7a21f40d083df8ead32e4919bbf27cf 246 Pfam PF00756 Putative esterase 72 238 7.4E-13 T 22-04-2016 IPR000801 Putative esterase SII_RS03945 c7a21f40d083df8ead32e4919bbf27cf 246 Gene3D G3DSA:3.40.50.1820 9 244 1.3E-23 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SII_RS03945 c7a21f40d083df8ead32e4919bbf27cf 246 SUPERFAMILY SSF53474 3 145 2.08E-22 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SII_RS03945 c7a21f40d083df8ead32e4919bbf27cf 246 SUPERFAMILY SSF53474 170 243 2.08E-22 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SII_RS02370 90dbf5b58f8b0e39a552536714631f3d 66 Gene3D G3DSA:1.20.20.10 6 65 9.8E-17 T 22-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 SII_RS02370 90dbf5b58f8b0e39a552536714631f3d 66 Pfam PF00137 ATP synthase subunit C 7 65 3.5E-6 T 22-04-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 SII_RS02370 90dbf5b58f8b0e39a552536714631f3d 66 ProSitePatterns PS00605 ATP synthase c subunit signature. 31 52 - T 22-04-2016 IPR020537 ATPase, F0 complex, subunit C, DCCD-binding site SII_RS02370 90dbf5b58f8b0e39a552536714631f3d 66 SUPERFAMILY SSF81333 4 65 1.44E-12 T 22-04-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 SII_RS02370 90dbf5b58f8b0e39a552536714631f3d 66 PRINTS PR00124 ATP synthase C subunit signature 24 39 7.1E-5 T 22-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 SII_RS02370 90dbf5b58f8b0e39a552536714631f3d 66 PRINTS PR00124 ATP synthase C subunit signature 41 66 7.1E-5 T 22-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 SII_RS09390 6f742c2241a01b94f361f1d48ac945da 658 SUPERFAMILY SSF64182 338 640 1.83E-61 T 22-04-2016 SII_RS09390 6f742c2241a01b94f361f1d48ac945da 658 Gene3D G3DSA:3.90.1640.10 338 528 1.8E-35 T 22-04-2016 SII_RS09390 6f742c2241a01b94f361f1d48ac945da 658 PANTHER PTHR12112:SF18 8 520 3.5E-71 T 22-04-2016 SII_RS09390 6f742c2241a01b94f361f1d48ac945da 658 PANTHER PTHR12112:SF18 557 616 3.5E-71 T 22-04-2016 SII_RS09390 6f742c2241a01b94f361f1d48ac945da 658 PANTHER PTHR12112 8 520 3.5E-71 T 22-04-2016 SII_RS09390 6f742c2241a01b94f361f1d48ac945da 658 PANTHER PTHR12112 557 616 3.5E-71 T 22-04-2016 SII_RS09390 6f742c2241a01b94f361f1d48ac945da 658 Pfam PF01368 DHH family 340 495 5.0E-20 T 22-04-2016 IPR001667 DDH domain SII_RS09390 6f742c2241a01b94f361f1d48ac945da 658 Pfam PF02272 DHHA1 domain 587 642 1.6E-9 T 22-04-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7 SII_RS09390 6f742c2241a01b94f361f1d48ac945da 658 PIRSF PIRSF026583 1 655 2.5E-235 T 22-04-2016 IPR014528 Cyclic-di-AMP phosphodiesterase GdpP/PdeA SII_RS07745 1f008cd5c5c739e0996009b16ca4821b 396 PANTHER PTHR36845:SF1 1 396 8.5E-97 T 22-04-2016 SII_RS07745 1f008cd5c5c739e0996009b16ca4821b 396 Gene3D G3DSA:1.50.10.10 27 396 5.5E-142 T 22-04-2016 IPR012341 Six-hairpin glycosidase GO:0003824 SII_RS07745 1f008cd5c5c739e0996009b16ca4821b 396 Pfam PF07470 Glycosyl Hydrolase Family 88 63 390 5.3E-70 T 22-04-2016 IPR010905 Glycosyl hydrolase, family 88 SII_RS07745 1f008cd5c5c739e0996009b16ca4821b 396 PANTHER PTHR36845 1 396 8.5E-97 T 22-04-2016 SII_RS07745 1f008cd5c5c739e0996009b16ca4821b 396 SUPERFAMILY SSF48208 26 396 5.67E-126 T 22-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 SII_RS06440 4402e7968c8b74d449a66d029322409c 263 SMART SM00363 185 247 2.7E-13 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SII_RS06440 4402e7968c8b74d449a66d029322409c 263 Gene3D G3DSA:3.10.290.10 183 238 2.6E-16 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SII_RS06440 4402e7968c8b74d449a66d029322409c 263 PANTHER PTHR32219 5 260 1.4E-52 T 22-04-2016 SII_RS06440 4402e7968c8b74d449a66d029322409c 263 PANTHER PTHR32219:SF5 5 260 1.4E-52 T 22-04-2016 SII_RS06440 4402e7968c8b74d449a66d029322409c 263 SUPERFAMILY SSF55174 182 255 6.8E-29 T 22-04-2016 SII_RS06440 4402e7968c8b74d449a66d029322409c 263 SUPERFAMILY SSF55174 47 130 6.8E-29 T 22-04-2016 SII_RS06440 4402e7968c8b74d449a66d029322409c 263 Pfam PF01479 S4 domain 185 231 4.7E-8 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SII_RS07685 984ad5e212629500deb6a66d5135ab73 92 Gene3D G3DSA:3.40.50.270 1 81 3.2E-14 T 22-04-2016 SII_RS07685 984ad5e212629500deb6a66d5135ab73 92 SUPERFAMILY SSF52794 1 90 3.66E-18 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 SII_RS07685 984ad5e212629500deb6a66d5135ab73 92 PANTHER PTHR33843:SF2 1 91 7.1E-21 T 22-04-2016 SII_RS07685 984ad5e212629500deb6a66d5135ab73 92 PANTHER PTHR33843 1 91 7.1E-21 T 22-04-2016 SII_RS07685 984ad5e212629500deb6a66d5135ab73 92 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 3 79 2.3E-14 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 SII_RS03165 1e195747d77f43897a8110be37a72292 126 SUPERFAMILY SSF52833 1 119 8.2E-5 T 22-04-2016 IPR012336 Thioredoxin-like fold SII_RS08990 44fbf6d1699b4f5087a9f4143649ca51 132 Pfam PF03960 ArsC family 55 113 3.2E-17 T 22-04-2016 IPR006660 Arsenate reductase-like SII_RS08990 44fbf6d1699b4f5087a9f4143649ca51 132 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 2 114 9.6E-33 T 22-04-2016 IPR006504 Transcriptional regulator Spx/MgsR SII_RS08990 44fbf6d1699b4f5087a9f4143649ca51 132 Gene3D G3DSA:3.40.30.10 1 125 1.4E-30 T 22-04-2016 IPR012336 Thioredoxin-like fold SII_RS08990 44fbf6d1699b4f5087a9f4143649ca51 132 Pfam PF00462 Glutaredoxin 2 45 2.4E-5 T 22-04-2016 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 SII_RS08990 44fbf6d1699b4f5087a9f4143649ca51 132 PANTHER PTHR30041:SF5 1 130 1.6E-67 T 22-04-2016 SII_RS08990 44fbf6d1699b4f5087a9f4143649ca51 132 PANTHER PTHR30041 1 130 1.6E-67 T 22-04-2016 SII_RS08990 44fbf6d1699b4f5087a9f4143649ca51 132 SUPERFAMILY SSF52833 1 125 1.55E-33 T 22-04-2016 IPR012336 Thioredoxin-like fold SII_RS07385 3c0389ac6399ba10f1e7f399529fd70d 208 PANTHER PTHR12677 19 198 7.0E-14 T 22-04-2016 IPR015414 Transmembrane protein TMEM64/TMEM41 GO:0016021 SII_RS07385 3c0389ac6399ba10f1e7f399529fd70d 208 Pfam PF09335 SNARE associated Golgi protein 77 193 1.3E-17 T 22-04-2016 IPR032816 SNARE associated Golgi protein SII_RS07385 3c0389ac6399ba10f1e7f399529fd70d 208 PANTHER PTHR12677:SF26 19 198 7.0E-14 T 22-04-2016 SII_RS02925 b3c6c407860200de68cc0835591ff006 97 Pfam PF11674 Protein of unknown function (DUF3270) 3 90 1.4E-30 T 22-04-2016 IPR021688 Protein of unknown function DUF3270 SII_RS04310 539decee879ae73e619e634f0485fe86 180 Gene3D G3DSA:3.40.190.10 1 46 8.3E-4 T 22-04-2016 SII_RS07015 4dec3f3ea4ad74f38d13b3f023f9b21b 221 PANTHER PTHR16254 8 160 3.9E-39 T 22-04-2016 SII_RS07015 4dec3f3ea4ad74f38d13b3f023f9b21b 221 Pfam PF02254 TrkA-N domain 8 121 3.1E-26 T 22-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 SII_RS07015 4dec3f3ea4ad74f38d13b3f023f9b21b 221 SUPERFAMILY SSF51735 5 135 5.44E-31 T 22-04-2016 IPR016040 NAD(P)-binding domain SII_RS07015 4dec3f3ea4ad74f38d13b3f023f9b21b 221 SUPERFAMILY SSF116726 133 219 6.67E-10 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SII_RS07015 4dec3f3ea4ad74f38d13b3f023f9b21b 221 Gene3D G3DSA:3.40.50.720 2 139 1.1E-33 T 22-04-2016 IPR016040 NAD(P)-binding domain SII_RS07015 4dec3f3ea4ad74f38d13b3f023f9b21b 221 Gene3D G3DSA:3.30.70.1450 156 219 6.2E-7 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SII_RS00685 2a7152721f157bae3e8611c241289124 146 Gene3D G3DSA:3.40.630.30 1 132 1.4E-28 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SII_RS00685 2a7152721f157bae3e8611c241289124 146 SUPERFAMILY SSF55729 1 129 2.45E-28 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SII_RS00685 2a7152721f157bae3e8611c241289124 146 PIRSF PIRSF037663 1 142 1.8E-14 T 22-04-2016 IPR017255 Acetyltransferase, GNAT, predicted SII_RS00685 2a7152721f157bae3e8611c241289124 146 Pfam PF00583 Acetyltransferase (GNAT) family 51 125 4.1E-15 T 22-04-2016 IPR000182 GNAT domain GO:0008080 SII_RS00685 2a7152721f157bae3e8611c241289124 146 PANTHER PTHR23091 1 135 5.1E-23 T 22-04-2016 SII_RS04300 6a847db4eec76c5ac0a8ace5efeb11d7 247 Gene3D G3DSA:3.40.50.1220 175 245 2.3E-47 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain SII_RS04300 6a847db4eec76c5ac0a8ace5efeb11d7 247 Gene3D G3DSA:3.40.50.1220 86 123 2.3E-47 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain SII_RS04300 6a847db4eec76c5ac0a8ace5efeb11d7 247 Gene3D G3DSA:3.40.50.1220 2 32 2.3E-47 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain SII_RS04300 6a847db4eec76c5ac0a8ace5efeb11d7 247 Pfam PF02146 Sir2 family 22 199 1.1E-47 T 22-04-2016 IPR003000 Sirtuin family GO:0070403 SII_RS04300 6a847db4eec76c5ac0a8ace5efeb11d7 247 PANTHER PTHR11085 3 241 6.2E-82 T 22-04-2016 IPR003000 Sirtuin family GO:0070403 SII_RS04300 6a847db4eec76c5ac0a8ace5efeb11d7 247 Gene3D G3DSA:3.30.1600.10 124 169 2.6E-23 T 22-04-2016 IPR026591 Sirtuin family, catalytic core small domain SII_RS04300 6a847db4eec76c5ac0a8ace5efeb11d7 247 Gene3D G3DSA:3.30.1600.10 33 75 2.6E-23 T 22-04-2016 IPR026591 Sirtuin family, catalytic core small domain SII_RS04300 6a847db4eec76c5ac0a8ace5efeb11d7 247 SUPERFAMILY SSF52467 2 245 6.27E-80 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain SII_RS03405 55684ff6e694623df9b09407d5781c57 121 Pfam PF05713 Bacterial mobilisation protein (MobC) 61 104 5.9E-11 T 22-04-2016 IPR008687 Bacterial mobilisation SII_RS01785 cd02ecda9b3991c747529a4b48f6e8e8 534 Pfam PF02618 YceG-like family 208 521 3.2E-79 T 22-04-2016 IPR003770 Uncharacterised protein family UPF0755, YceG-like SII_RS01785 cd02ecda9b3991c747529a4b48f6e8e8 534 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 171 526 4.9E-77 T 22-04-2016 IPR003770 Uncharacterised protein family UPF0755, YceG-like SII_RS01785 cd02ecda9b3991c747529a4b48f6e8e8 534 PANTHER PTHR30518 153 533 1.1E-83 T 22-04-2016 SII_RS01785 cd02ecda9b3991c747529a4b48f6e8e8 534 Gene3D G3DSA:3.30.160.60 493 524 2.3E-10 T 22-04-2016 IPR013087 Zinc finger C2H2-type/integrase DNA-binding domain GO:0003676 SII_RS01785 cd02ecda9b3991c747529a4b48f6e8e8 534 PANTHER PTHR30518:SF2 153 533 1.1E-83 T 22-04-2016 SII_RS07115 976c297bd923b08e39bd9a1289ef1c15 265 Gene3D G3DSA:3.90.1200.10 70 219 3.4E-13 T 22-04-2016 SII_RS07115 976c297bd923b08e39bd9a1289ef1c15 265 Pfam PF01636 Phosphotransferase enzyme family 44 219 1.3E-15 T 22-04-2016 IPR002575 Aminoglycoside phosphotransferase SII_RS07115 976c297bd923b08e39bd9a1289ef1c15 265 SUPERFAMILY SSF56112 5 231 5.88E-30 T 22-04-2016 IPR011009 Protein kinase-like domain SII_RS07115 976c297bd923b08e39bd9a1289ef1c15 265 PANTHER PTHR40086 1 262 7.3E-67 T 22-04-2016 SII_RS06775 652a21d07954e452f558ba819738529e 723 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 70 630 2.0E-168 T 22-04-2016 SII_RS06775 652a21d07954e452f558ba819738529e 723 Pfam PF00912 Transglycosylase 60 236 3.1E-60 T 22-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 SII_RS06775 652a21d07954e452f558ba819738529e 723 Gene3D G3DSA:3.40.710.10 239 660 6.5E-87 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SII_RS06775 652a21d07954e452f558ba819738529e 723 SUPERFAMILY SSF53955 50 264 2.7E-69 T 22-04-2016 IPR023346 Lysozyme-like domain SII_RS06775 652a21d07954e452f558ba819738529e 723 Pfam PF00905 Penicillin binding protein transpeptidase domain 331 625 8.0E-34 T 22-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 SII_RS06775 652a21d07954e452f558ba819738529e 723 Gene3D G3DSA:1.10.3810.10 60 238 3.8E-68 T 22-04-2016 SII_RS06775 652a21d07954e452f558ba819738529e 723 PANTHER PTHR32282:SF0 581 645 8.9E-200 T 22-04-2016 SII_RS06775 652a21d07954e452f558ba819738529e 723 PANTHER PTHR32282:SF0 2 562 8.9E-200 T 22-04-2016 SII_RS06775 652a21d07954e452f558ba819738529e 723 SUPERFAMILY SSF56601 273 655 4.0E-84 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SII_RS06775 652a21d07954e452f558ba819738529e 723 SUPERFAMILY SSF56601 218 240 4.0E-84 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SII_RS06775 652a21d07954e452f558ba819738529e 723 PANTHER PTHR32282 581 645 8.9E-200 T 22-04-2016 SII_RS06775 652a21d07954e452f558ba819738529e 723 PANTHER PTHR32282 2 562 8.9E-200 T 22-04-2016 SII_RS09135 1f501b1a13fe7c7dda0a62e57f8358b9 60 PANTHER PTHR35534 1 60 3.7E-28 T 22-04-2016 SII_RS09135 1f501b1a13fe7c7dda0a62e57f8358b9 60 Pfam PF01783 Ribosomal L32p protein family 2 54 2.1E-19 T 22-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 SII_RS09135 1f501b1a13fe7c7dda0a62e57f8358b9 60 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 54 17.863 T 22-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 SII_RS09135 1f501b1a13fe7c7dda0a62e57f8358b9 60 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 54 1.4E-19 T 22-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 SII_RS09135 1f501b1a13fe7c7dda0a62e57f8358b9 60 SUPERFAMILY SSF57829 2 54 7.32E-17 T 22-04-2016 IPR011332 Zinc-binding ribosomal protein GO:0006412 SII_RS02580 1b59ccbb59f24f99c4679662628a5d8d 202 SUPERFAMILY SSF53254 1 197 7.07E-38 T 22-04-2016 IPR029033 Histidine phosphatase superfamily SII_RS02580 1b59ccbb59f24f99c4679662628a5d8d 202 Gene3D G3DSA:3.40.50.1240 1 201 2.5E-39 T 22-04-2016 IPR029033 Histidine phosphatase superfamily SII_RS02580 1b59ccbb59f24f99c4679662628a5d8d 202 PANTHER PTHR23029 1 201 3.0E-26 T 22-04-2016 SII_RS02580 1b59ccbb59f24f99c4679662628a5d8d 202 PIRSF PIRSF000709 2 194 6.4E-13 T 22-04-2016 SII_RS02580 1b59ccbb59f24f99c4679662628a5d8d 202 SMART SM00855 2 157 1.6E-10 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 SII_RS02580 1b59ccbb59f24f99c4679662628a5d8d 202 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 194 1.7E-38 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 SII_RS02415 f84db06187da22a6e601b10c5138e573 58 Pfam PF11772 DNA-directed RNA polymerase subunit beta 15 57 4.3E-14 T 22-04-2016 IPR024596 DNA-directed RNA polymerase subunit beta/EpuA SII_RS01170 2a9862b22ccd2dc203ea15371bdd98f7 258 PANTHER PTHR34390:SF2 1 257 4.0E-72 T 22-04-2016 SII_RS01170 2a9862b22ccd2dc203ea15371bdd98f7 258 PANTHER PTHR34390 1 257 4.0E-72 T 22-04-2016 SII_RS01170 2a9862b22ccd2dc203ea15371bdd98f7 258 Pfam PF06738 Putative threonine/serine exporter 18 256 7.8E-69 T 22-04-2016 IPR010619 Putative threonine/serine exporter SII_RS03010 f6d9bf27f0a4d9cc5fc347816b1de0dd 67 SUPERFAMILY SSF54862 3 65 2.97E-6 T 22-04-2016 SII_RS03010 f6d9bf27f0a4d9cc5fc347816b1de0dd 67 PANTHER PTHR39163:SF1 1 65 3.2E-20 T 22-04-2016 SII_RS03010 f6d9bf27f0a4d9cc5fc347816b1de0dd 67 PANTHER PTHR39163 1 65 3.2E-20 T 22-04-2016 SII_RS03010 f6d9bf27f0a4d9cc5fc347816b1de0dd 67 Pfam PF13459 4Fe-4S single cluster domain 10 64 3.8E-8 T 22-04-2016 SII_RS03010 f6d9bf27f0a4d9cc5fc347816b1de0dd 67 Gene3D G3DSA:3.30.70.20 2 64 1.6E-17 T 22-04-2016 SII_RS04275 2c0f34626594d9ada970d303a5333483 155 SUPERFAMILY SSF53927 9 141 2.83E-37 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 SII_RS04275 2c0f34626594d9ada970d303a5333483 155 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 72 106 - T 22-04-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 SII_RS04275 2c0f34626594d9ada970d303a5333483 155 PANTHER PTHR11086 5 137 1.1E-53 T 22-04-2016 IPR015517 Deoxycytidylate deaminase-related SII_RS04275 2c0f34626594d9ada970d303a5333483 155 PIRSF PIRSF006019 1 152 4.9E-50 T 22-04-2016 IPR016473 Deoxycytidylate deaminase GO:0004132|GO:0006220|GO:0008270 KEGG: 00240+3.5.4.12|MetaCyc: PWY-7210 SII_RS04275 2c0f34626594d9ada970d303a5333483 155 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 8 117 6.5E-27 T 22-04-2016 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 SII_RS04275 2c0f34626594d9ada970d303a5333483 155 Gene3D G3DSA:3.40.140.10 7 147 4.6E-41 T 22-04-2016 SII_RS02775 4185815b73c742ba859a7b115ca6df43 371 PIRSF PIRSF005572 1 370 1.6E-113 T 22-04-2016 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 SII_RS02775 4185815b73c742ba859a7b115ca6df43 371 SUPERFAMILY SSF53383 1 369 2.76E-94 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SII_RS02775 4185815b73c742ba859a7b115ca6df43 371 PANTHER PTHR11601 2 369 2.3E-137 T 22-04-2016 SII_RS02775 4185815b73c742ba859a7b115ca6df43 371 Gene3D G3DSA:3.90.1150.10 244 368 2.2E-28 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SII_RS02775 4185815b73c742ba859a7b115ca6df43 371 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 191 210 - T 22-04-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site SII_RS02775 4185815b73c742ba859a7b115ca6df43 371 PANTHER PTHR11601:SF20 2 369 2.3E-137 T 22-04-2016 SII_RS02775 4185815b73c742ba859a7b115ca6df43 371 Pfam PF00266 Aminotransferase class-V 2 361 1.3E-72 T 22-04-2016 IPR000192 Aminotransferase class V domain SII_RS02775 4185815b73c742ba859a7b115ca6df43 371 Gene3D G3DSA:3.40.640.10 14 243 7.3E-79 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SII_RS05140 ca08fa61654e6bbfc04b2005159744c4 797 Gene3D G3DSA:3.40.50.300 620 745 4.9E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS05140 ca08fa61654e6bbfc04b2005159744c4 797 Gene3D G3DSA:3.40.50.300 453 529 4.9E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS05140 ca08fa61654e6bbfc04b2005159744c4 797 Pfam PF12846 AAA-like domain 451 722 2.3E-11 T 22-04-2016 SII_RS05140 ca08fa61654e6bbfc04b2005159744c4 797 SUPERFAMILY SSF52540 417 780 4.3E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS06395 ad85a039656df95e53ef73f85382310d 724 PANTHER PTHR33607:SF1 12 665 2.2E-114 T 22-04-2016 SII_RS06395 ad85a039656df95e53ef73f85382310d 724 PANTHER PTHR33607 12 665 2.2E-114 T 22-04-2016 SII_RS06395 ad85a039656df95e53ef73f85382310d 724 Gene3D G3DSA:3.60.10.10 359 664 4.6E-30 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase SII_RS06395 ad85a039656df95e53ef73f85382310d 724 SUPERFAMILY SSF56219 357 666 9.86E-31 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase SII_RS06395 ad85a039656df95e53ef73f85382310d 724 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 362 657 1.1E-11 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase SII_RS08420 6c848c3ce8c27d5a578b46eaf16090c0 105 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 11 30 1.1E-5 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site SII_RS08420 6c848c3ce8c27d5a578b46eaf16090c0 105 SUPERFAMILY SSF54523 12 73 2.28E-11 T 22-04-2016 SII_RS08420 6c848c3ce8c27d5a578b46eaf16090c0 105 PIRSF PIRSF029928 1 105 3.8E-36 T 22-04-2016 IPR016940 ComG operon protein C GO:0030420 SII_RS08420 6c848c3ce8c27d5a578b46eaf16090c0 105 PRINTS PR00813 Bacterial general secretion pathway protein G signature 11 36 2.5E-7 T 22-04-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 SII_RS08420 6c848c3ce8c27d5a578b46eaf16090c0 105 PRINTS PR00813 Bacterial general secretion pathway protein G signature 47 65 2.5E-7 T 22-04-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 SII_RS08420 6c848c3ce8c27d5a578b46eaf16090c0 105 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 8 30 1.3E-6 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site SII_RS06030 7acd8ada803f9083d32c747e994b28d0 117 Pfam PF11877 Protein of unknown function (DUF3397) 6 113 5.6E-27 T 22-04-2016 IPR024515 Protein of unknown function DUF3397 SII_RS09290 54b13a1f107db7902f88218061037782 43 Pfam PF12459 D-Ala-teichoic acid biosynthesis protein 3 43 5.5E-18 T 22-04-2016 IPR021008 Protein of unknown function DUF3687 SII_RS04520 e6ca9733fb0148d77862d1e1b1151b39 296 Pfam PF03668 P-loop ATPase protein family 6 289 1.5E-105 T 22-04-2016 IPR005337 RapZ-like family GO:0005524 SII_RS04520 e6ca9733fb0148d77862d1e1b1151b39 296 PANTHER PTHR30448 1 295 3.1E-151 T 22-04-2016 SII_RS04520 e6ca9733fb0148d77862d1e1b1151b39 296 SUPERFAMILY SSF52540 8 158 7.51E-12 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS04520 e6ca9733fb0148d77862d1e1b1151b39 296 PANTHER PTHR30448:SF0 1 295 3.1E-151 T 22-04-2016 SII_RS04520 e6ca9733fb0148d77862d1e1b1151b39 296 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 6 288 41.763 T 22-04-2016 IPR005337 RapZ-like family GO:0005524 SII_RS04520 e6ca9733fb0148d77862d1e1b1151b39 296 Gene3D G3DSA:3.40.50.300 3 158 1.9E-17 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS04520 e6ca9733fb0148d77862d1e1b1151b39 296 PIRSF PIRSF005052 6 291 1.7E-107 T 22-04-2016 IPR005337 RapZ-like family GO:0005524 SII_RS06690 536e4b1fdff33dc0c54231080647240b 232 PIRSF PIRSF031509 1 232 4.7E-63 T 22-04-2016 IPR016975 Cell wall-active antibiotic response protein GO:0016021 SII_RS06690 536e4b1fdff33dc0c54231080647240b 232 Pfam PF09922 Cell wall-active antibiotics response 4TMS YvqF 114 229 6.1E-34 T 22-04-2016 IPR024425 Cell wall-active antibiotics response 4TMS YvqF SII_RS02175 355a799f0db2bac56d1608d83562dc35 491 PANTHER PTHR37324 6 488 5.9E-79 T 22-04-2016 SII_RS02175 355a799f0db2bac56d1608d83562dc35 491 Pfam PF03611 PTS system sugar-specific permease component 15 417 2.0E-47 T 22-04-2016 IPR004703 Phosphotransferase system, sugar-specific permease component GO:0009401|GO:0016021 SII_RS02175 355a799f0db2bac56d1608d83562dc35 491 PIRSF PIRSF006304 8 491 2.3E-149 T 22-04-2016 IPR013853 Galactitol permease IIC component GO:0015577|GO:0015796 SII_RS01335 b8605f8305288c409237cfce236451dd 244 PANTHER PTHR21039 1 240 5.7E-24 T 22-04-2016 IPR010140 Histidinol phosphate phosphatase, HisJ GO:0000105|GO:0004401 KEGG: 00340+3.1.3.15|UniPathway: UPA00031 SII_RS01335 b8605f8305288c409237cfce236451dd 244 SUPERFAMILY SSF89550 2 241 7.32E-24 T 22-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 SII_RS01335 b8605f8305288c409237cfce236451dd 244 Gene3D G3DSA:3.20.20.140 3 240 3.8E-14 T 22-04-2016 SII_RS08955 54b7dda8ae044786c4884dcd36a697a5 145 Pfam PF12182 Bacterial lipoprotein 59 144 3.0E-25 T 22-04-2016 IPR020961 Domain of unknown function DUF3642, lipoprotein SII_RS08955 54b7dda8ae044786c4884dcd36a697a5 145 Gene3D G3DSA:2.40.128.50 57 144 1.4E-34 T 22-04-2016 IPR027279 D-aminopeptidase/lipoprotein domain SII_RS07810 aacca2a050cdef746fe9fc7061ac902e 253 Pfam PF12730 ABC-2 family transporter protein 4 174 6.9E-13 T 22-04-2016 IPR032688 ABC-2 family transporter protein GO:0006810 SII_RS07910 9d1b556cf42bb5a51c8dc878e5504409 342 Pfam PF02486 Replication initiation factor 102 291 1.6E-50 T 22-04-2016 IPR003491 Replication initiation factor GO:0003677|GO:0003916|GO:0006270 SII_RS05635 3f4d27b4ab723ab2457cfe07d8c69a00 1121 PANTHER PTHR30287 566 1121 3.6E-38 T 22-04-2016 SII_RS05635 3f4d27b4ab723ab2457cfe07d8c69a00 1121 PANTHER PTHR30287 1 236 3.6E-38 T 22-04-2016 SII_RS05635 3f4d27b4ab723ab2457cfe07d8c69a00 1121 Pfam PF02687 FtsX-like permease family 593 709 1.7E-14 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 SII_RS05635 3f4d27b4ab723ab2457cfe07d8c69a00 1121 Pfam PF02687 FtsX-like permease family 996 1104 1.4E-13 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 SII_RS07190 1b8f46f1f0c2de96328fcce09966aa1e 123 PIRSF PIRSF021265 1 122 2.9E-52 T 22-04-2016 IPR010360 Protein of unknown function DUF956 SII_RS07190 1b8f46f1f0c2de96328fcce09966aa1e 123 Pfam PF06115 Domain of unknown function (DUF956) 1 114 1.2E-43 T 22-04-2016 IPR010360 Protein of unknown function DUF956 SII_RS01805 70c1e5fce8d96bdef35e7933832a5f95 92 SUPERFAMILY SSF54975 1 90 5.23E-21 T 22-04-2016 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 SII_RS01805 70c1e5fce8d96bdef35e7933832a5f95 92 Gene3D G3DSA:3.30.70.100 1 90 2.8E-24 T 22-04-2016 SII_RS01805 70c1e5fce8d96bdef35e7933832a5f95 92 PANTHER PTHR10029 1 90 4.2E-13 T 22-04-2016 SII_RS01805 70c1e5fce8d96bdef35e7933832a5f95 92 Pfam PF00708 Acylphosphatase 1 90 1.2E-22 T 22-04-2016 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 SII_RS05255 90e6d5132891a90679ef9d4ce0a18f59 387 Gene3D G3DSA:3.30.750.80 69 169 4.7E-22 T 22-04-2016 SII_RS05255 90e6d5132891a90679ef9d4ce0a18f59 387 PANTHER PTHR11061:SF15 38 384 4.6E-118 T 22-04-2016 SII_RS05255 90e6d5132891a90679ef9d4ce0a18f59 387 SUPERFAMILY SSF53335 76 379 1.4E-62 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SII_RS05255 90e6d5132891a90679ef9d4ce0a18f59 387 Gene3D G3DSA:3.40.50.150 177 385 1.0E-45 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SII_RS05255 90e6d5132891a90679ef9d4ce0a18f59 387 SUPERFAMILY SSF88697 1 67 3.98E-15 T 22-04-2016 IPR015947 PUA-like domain SII_RS05255 90e6d5132891a90679ef9d4ce0a18f59 387 PANTHER PTHR11061 38 384 4.6E-118 T 22-04-2016 SII_RS05255 90e6d5132891a90679ef9d4ce0a18f59 387 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 164 340 1.6E-29 T 22-04-2016 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 SII_RS02585 cdce1255394fa65320d091e298955070 251 PANTHER PTHR24322:SF509 6 128 3.1E-70 T 22-04-2016 SII_RS02585 cdce1255394fa65320d091e298955070 251 PANTHER PTHR24322:SF509 144 176 3.1E-70 T 22-04-2016 SII_RS02585 cdce1255394fa65320d091e298955070 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 144 163 4.1E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SII_RS02585 cdce1255394fa65320d091e298955070 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 124 132 4.1E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SII_RS02585 cdce1255394fa65320d091e298955070 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 71 82 4.1E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SII_RS02585 cdce1255394fa65320d091e298955070 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 144 163 3.1E-21 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SII_RS02585 cdce1255394fa65320d091e298955070 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 165 182 3.1E-21 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SII_RS02585 cdce1255394fa65320d091e298955070 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 118 134 3.1E-21 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SII_RS02585 cdce1255394fa65320d091e298955070 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 71 82 3.1E-21 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SII_RS02585 cdce1255394fa65320d091e298955070 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 3.1E-21 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SII_RS02585 cdce1255394fa65320d091e298955070 251 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 131 159 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 SII_RS02585 cdce1255394fa65320d091e298955070 251 PANTHER PTHR24322 6 128 3.1E-70 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SII_RS02585 cdce1255394fa65320d091e298955070 251 PANTHER PTHR24322 144 176 3.1E-70 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SII_RS02585 cdce1255394fa65320d091e298955070 251 Pfam PF00106 short chain dehydrogenase 3 184 2.1E-44 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SII_RS02585 cdce1255394fa65320d091e298955070 251 SUPERFAMILY SSF51735 2 248 7.4E-51 T 22-04-2016 IPR016040 NAD(P)-binding domain SII_RS02585 cdce1255394fa65320d091e298955070 251 Gene3D G3DSA:3.40.50.720 2 211 7.6E-50 T 22-04-2016 IPR016040 NAD(P)-binding domain SII_RS02505 18764ca54252e211072aaed7cf2361ed 124 SUPERFAMILY SSF54611 1 124 3.6E-49 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 SII_RS02505 18764ca54252e211072aaed7cf2361ed 124 PIRSF PIRSF031568 1 124 1.7E-58 T 22-04-2016 IPR009530 Protein of unknown function DUF1149 SII_RS02505 18764ca54252e211072aaed7cf2361ed 124 Pfam PF06619 Protein of unknown function (DUF1149) 1 124 7.2E-48 T 22-04-2016 IPR009530 Protein of unknown function DUF1149 SII_RS02505 18764ca54252e211072aaed7cf2361ed 124 Gene3D G3DSA:3.10.420.10 1 124 1.8E-54 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 SII_RS00605 37d350a0839f463091b1c03bb26698cf 268 Pfam PF00950 ABC 3 transport family 7 261 1.9E-80 T 22-04-2016 IPR001626 ABC-3 GO:0005524|GO:0006810|GO:0016020|GO:0042626 SII_RS00605 37d350a0839f463091b1c03bb26698cf 268 Gene3D G3DSA:1.10.3470.10 16 263 2.0E-7 T 22-04-2016 IPR029022 ABC transporter, BtuC-like SII_RS00605 37d350a0839f463091b1c03bb26698cf 268 PANTHER PTHR30477:SF0 1 267 1.2E-84 T 22-04-2016 SII_RS00605 37d350a0839f463091b1c03bb26698cf 268 PANTHER PTHR30477 1 267 1.2E-84 T 22-04-2016 SII_RS00605 37d350a0839f463091b1c03bb26698cf 268 SUPERFAMILY SSF81345 3 260 4.18E-37 T 22-04-2016 IPR029022 ABC transporter, BtuC-like SII_RS01200 6fec1e022b4be4c72b68bc23dcd20f50 101 SUPERFAMILY SSF102829 20 91 2.22E-5 T 22-04-2016 IPR007838 Cell division protein ZapA-like SII_RS09115 e7ab118be529893d439c338163c15a87 311 PANTHER PTHR33545:SF5 24 311 1.0E-119 T 22-04-2016 SII_RS09115 e7ab118be529893d439c338163c15a87 311 Pfam PF10035 Uncharacterized protein conserved in bacteria (DUF2179) 251 306 1.7E-17 T 22-04-2016 IPR019264 Domain of unknown function DUF2179 SII_RS09115 e7ab118be529893d439c338163c15a87 311 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 41 245 3.7E-57 T 22-04-2016 IPR003740 Uncharacterised membrane protein YitT SII_RS09115 e7ab118be529893d439c338163c15a87 311 PIRSF PIRSF006483 20 311 9.4E-101 T 22-04-2016 IPR003740 Uncharacterised membrane protein YitT SII_RS09115 e7ab118be529893d439c338163c15a87 311 PANTHER PTHR33545 24 311 1.0E-119 T 22-04-2016 SII_RS05290 5dcd269355e5acb0fe306424607b412a 81 Pfam PF01610 Transposase 19 63 5.6E-10 T 22-04-2016 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain SII_RS05290 5dcd269355e5acb0fe306424607b412a 81 PANTHER PTHR33498 34 77 7.8E-20 T 22-04-2016 SII_RS05290 5dcd269355e5acb0fe306424607b412a 81 PANTHER PTHR33498:SF1 34 77 7.8E-20 T 22-04-2016 SII_RS01090 93d19686b777fb29c38d81f08830b04d 164 Gene3D G3DSA:1.10.10.10 5 29 4.8E-4 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SII_RS01090 93d19686b777fb29c38d81f08830b04d 164 Pfam PF04394 Protein of unknown function, DUF536 104 146 1.9E-16 T 22-04-2016 IPR007489 Domain of unknown function DUF536 SII_RS01215 9510dd7a3242a079bb1807520b7f5aed 473 PANTHER PTHR12994:SF17 8 455 1.3E-54 T 22-04-2016 SII_RS01215 9510dd7a3242a079bb1807520b7f5aed 473 PANTHER PTHR12994 8 455 1.3E-54 T 22-04-2016 SII_RS01215 9510dd7a3242a079bb1807520b7f5aed 473 Pfam PF03577 Peptidase family C69 9 410 1.5E-187 T 22-04-2016 IPR005322 Peptidase C69, dipeptidase A GO:0006508|GO:0016805 SII_RS01395 bdc7ba3875c88854f3dc5e037cd114e0 186 PIRSF PIRSF037394 1 185 6.8E-62 T 22-04-2016 IPR017195 ABC-type thiamin-related transport system, permease component 1, predicted SII_RS01395 bdc7ba3875c88854f3dc5e037cd114e0 186 Pfam PF09819 ABC-type cobalt transport system, permease component 8 131 5.0E-40 T 22-04-2016 IPR017195 ABC-type thiamin-related transport system, permease component 1, predicted SII_RS04535 696179e70a3b0c60c2e85c2ff3731311 212 TIGRFAM TIGR01906 integ_TIGR01906: integral membrane protein TIGR01906 1 204 1.2E-53 T 22-04-2016 IPR010178 Integral membrane protein 1906 SII_RS04535 696179e70a3b0c60c2e85c2ff3731311 212 Pfam PF07314 Protein of unknown function (DUF1461) 6 180 2.4E-44 T 22-04-2016 IPR010178 Integral membrane protein 1906 SII_RS06515 05e47a5ea1f77e40e669e08df8cc7231 227 Pfam PF06750 Bacterial Peptidase A24 N-terminal domain 8 87 1.8E-23 T 22-04-2016 IPR010627 Peptidase A24A, N-terminal KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- SII_RS06515 05e47a5ea1f77e40e669e08df8cc7231 227 PANTHER PTHR30487 1 219 1.0E-36 T 22-04-2016 SII_RS02215 608ecf0977161264325d27225ea54529 87 Pfam PF01541 GIY-YIG catalytic domain 5 76 1.4E-14 T 22-04-2016 IPR000305 GIY-YIG nuclease superfamily SII_RS02215 608ecf0977161264325d27225ea54529 87 SUPERFAMILY SSF82771 3 75 5.49E-13 T 22-04-2016 IPR000305 GIY-YIG nuclease superfamily SII_RS02215 608ecf0977161264325d27225ea54529 87 PANTHER PTHR34477 1 82 1.1E-34 T 22-04-2016 SII_RS02215 608ecf0977161264325d27225ea54529 87 PANTHER PTHR34477:SF1 1 82 1.1E-34 T 22-04-2016 SII_RS03950 1d14cfba2dfa04505e9cc7cb65ef7b05 386 Pfam PF13535 ATP-grasp domain 147 283 7.9E-9 T 22-04-2016 SII_RS03950 1d14cfba2dfa04505e9cc7cb65ef7b05 386 Gene3D G3DSA:3.30.470.20 108 335 4.2E-26 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 SII_RS03950 1d14cfba2dfa04505e9cc7cb65ef7b05 386 SUPERFAMILY SSF56059 90 316 7.07E-30 T 22-04-2016 SII_RS00895 301853028b0f4d98ce579e15a0d89b0d 120 Gene3D G3DSA:2.140.10.10 44 113 5.1E-5 T 22-04-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain SII_RS00895 301853028b0f4d98ce579e15a0d89b0d 120 SUPERFAMILY SSF50998 46 113 5.02E-6 T 22-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily SII_RS03255 368f9d5ac6fe757211095c9e1ebb4ffe 27 ProDom PD018707 LEADER PEPTIDE METHYLASE PLASMID RESISTANCE RRNA METHYLTRANSFERASE ERMB 23S ANTIBIOTIC 1 27 2.0E-8 T 22-04-2016 IPR009391 23S rRNA methylase leader peptide GO:0046677 SII_RS03255 368f9d5ac6fe757211095c9e1ebb4ffe 27 Pfam PF06308 23S rRNA methylase leader peptide (ErmC) 1 27 5.8E-16 T 22-04-2016 IPR009391 23S rRNA methylase leader peptide GO:0046677 SII_RS01465 3ae6fbcb7f1b65f0cb3ffe73dd70a614 101 Pfam PF13780 Domain of unknown function (DUF4176) 7 83 7.4E-27 T 22-04-2016 IPR025233 Protein of unknown function DUF4176 SII_RS08165 1b0beefa9ae53ed52a706aa8df4765c2 255 PANTHER PTHR36701 23 254 1.4E-79 T 22-04-2016 SII_RS08165 1b0beefa9ae53ed52a706aa8df4765c2 255 Pfam PF02677 Uncharacterized BCR, COG1636 39 216 1.9E-65 T 22-04-2016 IPR003828 Protein of unknown function DUF208 SII_RS04280 d4449be41cb7001f215d89bd535035a4 194 PANTHER PTHR30328:SF20 3 169 2.2E-18 T 22-04-2016 SII_RS04280 d4449be41cb7001f215d89bd535035a4 194 PANTHER PTHR30328 3 169 2.2E-18 T 22-04-2016 SII_RS04280 d4449be41cb7001f215d89bd535035a4 194 Gene3D G3DSA:1.10.357.10 23 120 1.4E-14 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 SII_RS04280 d4449be41cb7001f215d89bd535035a4 194 Pfam PF00440 Bacterial regulatory proteins, tetR family 35 75 3.0E-9 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SII_RS04280 d4449be41cb7001f215d89bd535035a4 194 SUPERFAMILY SSF46689 22 87 5.08E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SII_RS04290 bd0bed3e3d5f09d70ada228dd9112e95 243 Pfam PF11750 Protein of unknown function (DUF3307) 16 130 2.9E-24 T 22-04-2016 IPR021737 Bacteriophage phiKZ, Orf197 SII_RS05735 160d0fe37b6f2f8339d5a79da5843ff2 128 Pfam PF09148 Domain of unknown function (DUF1934) 3 125 4.2E-23 T 22-04-2016 IPR015231 Protein of unknown function DUF1934 SII_RS05735 160d0fe37b6f2f8339d5a79da5843ff2 128 Gene3D G3DSA:2.40.128.20 1 128 5.6E-30 T 22-04-2016 IPR012674 Calycin SII_RS05735 160d0fe37b6f2f8339d5a79da5843ff2 128 SUPERFAMILY SSF50814 1 128 1.26E-31 T 22-04-2016 IPR011038 Calycin-like SII_RS03365 1856f49c6e980ceda07ec5e9c0e8e755 361 Gene3D G3DSA:3.90.580.10 2 80 7.2E-13 T 22-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 SII_RS03365 1856f49c6e980ceda07ec5e9c0e8e755 361 Gene3D G3DSA:3.40.1360.10 198 236 7.0E-6 T 22-04-2016 SII_RS03365 1856f49c6e980ceda07ec5e9c0e8e755 361 Gene3D G3DSA:3.40.1360.10 270 345 7.0E-6 T 22-04-2016 SII_RS03365 1856f49c6e980ceda07ec5e9c0e8e755 361 Pfam PF13154 Protein of unknown function (DUF3991) 113 194 6.1E-6 T 22-04-2016 IPR025054 Domain of unknown function DUF3991 SII_RS03365 1856f49c6e980ceda07ec5e9c0e8e755 361 SUPERFAMILY SSF57783 3 79 1.65E-13 T 22-04-2016 SII_RS03365 1856f49c6e980ceda07ec5e9c0e8e755 361 Pfam PF13155 Toprim-like 204 329 2.7E-6 T 22-04-2016 SII_RS03015 8b25a8f5ff4e2f6c55dcd61313e4390f 150 SMART SM00257 103 150 0.0097 T 22-04-2016 IPR018392 LysM domain SII_RS03015 8b25a8f5ff4e2f6c55dcd61313e4390f 150 Gene3D G3DSA:3.10.350.10 105 149 4.0E-4 T 22-04-2016 IPR018392 LysM domain SII_RS02450 41feb7cbeb1a30a9702582a5a59cd354 231 Pfam PF04172 LrgB-like family 15 227 8.0E-64 T 22-04-2016 IPR007300 CidB/LrgB family SII_RS02450 41feb7cbeb1a30a9702582a5a59cd354 231 PANTHER PTHR30249 1 230 5.2E-64 T 22-04-2016 SII_RS05890 db4b3d101a26f07d0e05687b1410e5ae 349 Gene3D G3DSA:3.40.30.10 113 229 1.3E-27 T 22-04-2016 IPR012336 Thioredoxin-like fold SII_RS05890 db4b3d101a26f07d0e05687b1410e5ae 349 SUPERFAMILY SSF52833 117 229 9.49E-18 T 22-04-2016 IPR012336 Thioredoxin-like fold SII_RS01515 9872e09dfc880e0c3a1cde9d890dd5f8 251 SUPERFAMILY SSF81301 11 104 2.75E-5 T 22-04-2016 SII_RS01515 9872e09dfc880e0c3a1cde9d890dd5f8 251 Gene3D G3DSA:3.30.460.10 7 120 1.5E-4 T 22-04-2016 SII_RS01165 838d8d729608a7a2a996f44e7ca498ed 146 PANTHER PTHR34390 1 143 1.3E-33 T 22-04-2016 SII_RS01165 838d8d729608a7a2a996f44e7ca498ed 146 Pfam PF12821 Threonine/Serine exporter, ThrE 7 132 2.2E-19 T 22-04-2016 IPR024528 Threonine/Serine exporter, ThrE SII_RS00985 ed799e159b0c93849991cae2386396f6 418 Pfam PF02646 RmuC family 114 396 4.0E-71 T 22-04-2016 IPR003798 DNA recombination RmuC SII_RS00985 ed799e159b0c93849991cae2386396f6 418 SUPERFAMILY SSF58113 21 147 4.97E-6 T 22-04-2016 SII_RS00985 ed799e159b0c93849991cae2386396f6 418 PANTHER PTHR30563 1 417 1.9E-113 T 22-04-2016 SII_RS04320 545a97f09502bd989e7f6d17524263a8 107 Gene3D G3DSA:3.10.450.50 2 105 3.0E-9 T 22-04-2016 IPR032710 NTF2-like domain SII_RS04320 545a97f09502bd989e7f6d17524263a8 107 SUPERFAMILY SSF54427 4 105 2.85E-11 T 22-04-2016 IPR032710 NTF2-like domain SII_RS00535 20e19732be7df67de0119091e4749f3d 107 SUPERFAMILY SSF159468 8 106 1.57E-23 T 22-04-2016 IPR008218 ATPase, V1 complex, subunit F GO:0034220 SII_RS00535 20e19732be7df67de0119091e4749f3d 107 Pfam PF01990 ATP synthase (F/14-kDa) subunit 8 97 4.0E-21 T 22-04-2016 IPR008218 ATPase, V1 complex, subunit F GO:0034220 SII_RS00535 20e19732be7df67de0119091e4749f3d 107 Gene3D G3DSA:3.40.50.10580 7 106 2.1E-20 T 22-04-2016 IPR008218 ATPase, V1 complex, subunit F GO:0034220 SII_RS05025 cb28be84e2ac91789b28a99cdd7cbe49 57 Pfam PF02052 Gallidermin 6 35 1.1E-6 T 22-04-2016 IPR006079 Lantibiotic, Type A, Bacillales-type GO:0005576|GO:0042742 SII_RS05025 cb28be84e2ac91789b28a99cdd7cbe49 57 PRINTS PR00324 Nisin signature 38 51 1.6E-20 T 22-04-2016 IPR006079 Lantibiotic, Type A, Bacillales-type GO:0005576|GO:0042742 SII_RS05025 cb28be84e2ac91789b28a99cdd7cbe49 57 PRINTS PR00324 Nisin signature 26 37 1.6E-20 T 22-04-2016 IPR006079 Lantibiotic, Type A, Bacillales-type GO:0005576|GO:0042742 SII_RS05025 cb28be84e2ac91789b28a99cdd7cbe49 57 PRINTS PR00324 Nisin signature 5 22 1.6E-20 T 22-04-2016 IPR006079 Lantibiotic, Type A, Bacillales-type GO:0005576|GO:0042742 SII_RS05025 cb28be84e2ac91789b28a99cdd7cbe49 57 TIGRFAM TIGR03731 lantibio_gallid: lantibiotic, gallidermin/nisin family 1 50 4.0E-19 T 22-04-2016 IPR006079 Lantibiotic, Type A, Bacillales-type GO:0005576|GO:0042742 SII_RS08445 8d2b5160c9839e8d3b9e1f27c7ff2ab8 119 PANTHER PTHR30204 5 108 4.4E-35 T 22-04-2016 SII_RS08445 8d2b5160c9839e8d3b9e1f27c7ff2ab8 119 SUPERFAMILY SSF46955 13 87 5.95E-18 T 22-04-2016 IPR009061 Putative DNA-binding domain SII_RS08445 8d2b5160c9839e8d3b9e1f27c7ff2ab8 119 SMART SM00422 13 81 1.2E-17 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SII_RS08445 8d2b5160c9839e8d3b9e1f27c7ff2ab8 119 PANTHER PTHR30204:SF8 5 108 4.4E-35 T 22-04-2016 SII_RS08445 8d2b5160c9839e8d3b9e1f27c7ff2ab8 119 Gene3D G3DSA:1.10.1660.10 14 98 2.9E-20 T 22-04-2016 SII_RS08445 8d2b5160c9839e8d3b9e1f27c7ff2ab8 119 Pfam PF13411 MerR HTH family regulatory protein 14 77 1.3E-17 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SII_RS09210 a52155a9a7372667e3aa532467f35392 413 SUPERFAMILY SSF103473 8 405 2.22E-19 T 22-04-2016 IPR020846 Major facilitator superfamily domain SII_RS09210 a52155a9a7372667e3aa532467f35392 413 Gene3D G3DSA:1.20.1250.20 10 191 2.8E-9 T 22-04-2016 SII_RS05805 fc31d59e16d64acd69d7b4d09bd2738f 105 SUPERFAMILY SSF46973 1 102 1.57E-33 T 22-04-2016 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SII_RS05805 fc31d59e16d64acd69d7b4d09bd2738f 105 PIRSF PIRSF000699 1 105 8.0E-37 T 22-04-2016 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SII_RS05805 fc31d59e16d64acd69d7b4d09bd2738f 105 Gene3D G3DSA:1.20.58.80 2 104 3.5E-35 T 22-04-2016 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SII_RS05805 fc31d59e16d64acd69d7b4d09bd2738f 105 Pfam PF02255 PTS system, Lactose/Cellobiose specific IIA subunit 9 101 1.0E-32 T 22-04-2016 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SII_RS05805 fc31d59e16d64acd69d7b4d09bd2738f 105 PANTHER PTHR34382 1 105 1.3E-32 T 22-04-2016 SII_RS01410 c43c19a8bf04162cb2429cfb84702061 269 Pfam PF02611 CDP-diacylglycerol pyrophosphatase 43 262 2.8E-30 T 22-04-2016 IPR003763 CDP-diacylglycerol pyrophosphatase GO:0008654|GO:0008715|GO:0016020 KEGG: 00564+3.6.1.26|UniPathway: UPA00609 SII_RS01410 c43c19a8bf04162cb2429cfb84702061 269 SUPERFAMILY SSF54197 38 261 1.26E-29 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 SII_RS01410 c43c19a8bf04162cb2429cfb84702061 269 Gene3D G3DSA:3.30.428.30 36 262 1.3E-33 T 22-04-2016 SII_RS05795 3e3e05e3317982eacb93763dee1c6354 447 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 17 439 3.4E-93 T 22-04-2016 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 SII_RS05795 3e3e05e3317982eacb93763dee1c6354 447 Pfam PF02378 Phosphotransferase system, EIIC 33 366 1.8E-46 T 22-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 SII_RS05795 3e3e05e3317982eacb93763dee1c6354 447 PIRSF PIRSF006351 1 447 1.5E-120 T 22-04-2016 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 SII_RS05795 3e3e05e3317982eacb93763dee1c6354 447 PANTHER PTHR33989 1 440 9.0E-111 T 22-04-2016 SII_RS04090 afecdff38c053c0d593b4d2becf6dcc4 394 Pfam PF06889 Protein of unknown function (DUF1266) 235 394 3.7E-25 T 22-04-2016 IPR009677 Protein of unknown function DUF1266 SII_RS08200 49f2a41a9029e1fe5de6e3c35f1627e3 145 Gene3D G3DSA:3.40.50.510 1 143 2.2E-29 T 22-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 SII_RS08200 49f2a41a9029e1fe5de6e3c35f1627e3 145 SUPERFAMILY SSF53062 1 133 1.83E-25 T 22-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 SII_RS08200 49f2a41a9029e1fe5de6e3c35f1627e3 145 Pfam PF03610 PTS system fructose IIA component 4 120 3.9E-22 T 22-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 SII_RS00740 47f91b6f56ec000c239e63d23d77a45c 155 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 12 153 44.866 T 22-04-2016 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 SII_RS00740 47f91b6f56ec000c239e63d23d77a45c 155 PANTHER PTHR11079 9 155 1.0E-53 T 22-04-2016 SII_RS00740 47f91b6f56ec000c239e63d23d77a45c 155 Gene3D G3DSA:3.40.140.10 5 152 2.1E-57 T 22-04-2016 SII_RS00740 47f91b6f56ec000c239e63d23d77a45c 155 PANTHER PTHR11079:SF72 9 155 1.0E-53 T 22-04-2016 SII_RS00740 47f91b6f56ec000c239e63d23d77a45c 155 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 57 94 - T 22-04-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 SII_RS00740 47f91b6f56ec000c239e63d23d77a45c 155 Pfam PF14437 MafB19-like deaminase 7 153 2.9E-37 T 22-04-2016 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 SII_RS00740 47f91b6f56ec000c239e63d23d77a45c 155 SUPERFAMILY SSF53927 4 154 1.66E-50 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 SII_RS00455 81a1aecc855de100529d08ac7371b347 295 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 66 283 6.0E-15 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SII_RS00455 81a1aecc855de100529d08ac7371b347 295 SUPERFAMILY SSF161098 54 282 7.72E-57 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SII_RS00455 81a1aecc855de100529d08ac7371b347 295 Gene3D G3DSA:1.10.3720.10 7 285 1.3E-59 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SII_RS00455 81a1aecc855de100529d08ac7371b347 295 PANTHER PTHR30193 5 295 5.7E-90 T 22-04-2016 SII_RS00455 81a1aecc855de100529d08ac7371b347 295 PANTHER PTHR30193:SF6 5 295 5.7E-90 T 22-04-2016 SII_RS07315 424f8827004377dfb3553b8414bfad8b 283 SUPERFAMILY SSF53850 34 283 8.35E-75 T 22-04-2016 SII_RS07315 424f8827004377dfb3553b8414bfad8b 283 Gene3D G3DSA:3.40.190.10 32 169 4.1E-49 T 22-04-2016 SII_RS07315 424f8827004377dfb3553b8414bfad8b 283 Pfam PF03180 NLPA lipoprotein 35 283 2.4E-90 T 22-04-2016 IPR004872 Lipoprotein NlpA family SII_RS07315 424f8827004377dfb3553b8414bfad8b 283 PANTHER PTHR30429 2 283 8.5E-92 T 22-04-2016 IPR004872 Lipoprotein NlpA family SII_RS07315 424f8827004377dfb3553b8414bfad8b 283 PIRSF PIRSF002854 1 283 2.2E-82 T 22-04-2016 IPR004872 Lipoprotein NlpA family SII_RS04675 2cf9d50c6bd4473f98627dff7905c8af 99 Gene3D G3DSA:3.40.1160.10 12 86 1.2E-5 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SII_RS04675 2cf9d50c6bd4473f98627dff7905c8af 99 SUPERFAMILY SSF53633 12 88 2.09E-8 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SII_RS00860 c8621b959e1b3677921e1d582d5f580a 378 Pfam PF10140 WXG100 protein secretion system (Wss), protein YukC 40 366 7.8E-78 T 22-04-2016 IPR018778 Type VII secretion system EssB SII_RS00860 c8621b959e1b3677921e1d582d5f580a 378 TIGRFAM TIGR03926 T7_EssB: type VII secretion protein EssB 21 366 7.5E-79 T 22-04-2016 IPR018778 Type VII secretion system EssB SII_RS08415 96bdbe681facfc337e9cdc95dacdd807 97 Pfam PF11773 Type II secretory pathway pseudopilin 13 92 6.3E-30 T 22-04-2016 IPR021749 Type II secretory pathway pseudopilin SII_RS03685 e0ee4772116e44d31bd17fd26cbab5c7 124 Pfam PF03772 Competence protein 38 105 2.4E-6 T 22-04-2016 IPR004477 ComEC/Rec2-related protein SII_RS02445 236d837e7c6c45bb00fd533f6a000c32 126 PANTHER PTHR33931:SF2 1 112 1.6E-26 T 22-04-2016 SII_RS02445 236d837e7c6c45bb00fd533f6a000c32 126 PANTHER PTHR33931 1 112 1.6E-26 T 22-04-2016 SII_RS02445 236d837e7c6c45bb00fd533f6a000c32 126 Pfam PF03788 LrgA family 15 107 1.5E-26 T 22-04-2016 IPR005538 LrgA/CidA family GO:0016021 SII_RS04025 351642b3f917071994c88d143f7d1257 282 Gene3D G3DSA:3.40.50.1820 38 281 4.4E-87 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SII_RS04025 351642b3f917071994c88d143f7d1257 282 Pfam PF06028 Alpha/beta hydrolase of unknown function (DUF915) 34 282 1.9E-76 T 22-04-2016 IPR010315 Protein of unknown function DUF915, hydrolase-like SII_RS04025 351642b3f917071994c88d143f7d1257 282 SUPERFAMILY SSF53474 41 271 1.71E-14 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SII_RS03455 303057f6c486e237b209920c68e270f8 245 SUPERFAMILY SSF102114 4 199 1.57E-8 T 22-04-2016 SII_RS03455 303057f6c486e237b209920c68e270f8 245 Gene3D G3DSA:3.20.20.70 4 205 4.6E-7 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SII_RS01955 c667f849f4bd1788e712b83217dc49d2 76 SUPERFAMILY SSF143567 3 76 1.7E-23 T 22-04-2016 SII_RS01955 c667f849f4bd1788e712b83217dc49d2 76 Pfam PF08796 Protein of unknown function (DUF1797) 8 75 3.6E-23 T 22-04-2016 IPR014904 Protein of unknown function DUF1797 SII_RS01955 c667f849f4bd1788e712b83217dc49d2 76 PIRSF PIRSF037356 1 76 1.9E-29 T 22-04-2016 IPR014904 Protein of unknown function DUF1797 SII_RS05415 7898cd09fbfdeab3da0f1c6d66202fa2 233 Pfam PF02517 CAAX protease self-immunity 134 221 1.0E-14 T 22-04-2016 IPR003675 CAAX amino terminal protease GO:0016020 SII_RS08145 64e01480966a67baaf21f8e96fda260e 156 Pfam PF11217 Protein of unknown function (DUF3013) 1 155 3.9E-61 T 22-04-2016 IPR021380 Protein of unknown function DUF3013 SII_RS07730 853b3de7c8d33789dd084e79027b330c 271 PANTHER PTHR32502:SF6 4 270 3.2E-47 T 22-04-2016 SII_RS07730 853b3de7c8d33789dd084e79027b330c 271 PANTHER PTHR32502 4 270 3.2E-47 T 22-04-2016 SII_RS07730 853b3de7c8d33789dd084e79027b330c 271 Pfam PF03613 PTS system mannose/fructose/sorbose family IID component 5 270 1.4E-81 T 22-04-2016 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 SII_RS01125 6f243e01d3bfe6601623066863ecf184 246 Gene3D G3DSA:3.10.180.10 148 245 1.8E-21 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SII_RS01125 6f243e01d3bfe6601623066863ecf184 246 Gene3D G3DSA:3.10.180.10 1 124 1.0E-27 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SII_RS01125 6f243e01d3bfe6601623066863ecf184 246 Pfam PF14507 CppA C-terminal 146 243 9.3E-25 T 22-04-2016 IPR032703 CppA, C-terminal SII_RS01125 6f243e01d3bfe6601623066863ecf184 246 SUPERFAMILY SSF54593 15 210 2.93E-6 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SII_RS01125 6f243e01d3bfe6601623066863ecf184 246 Pfam PF14506 CppA N-terminal 11 129 7.1E-49 T 22-04-2016 IPR032702 CppA, N-terminal SII_RS02700 9586d8ed5b1cd59b47d64e808feff721 133 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 3 114 1.2E-35 T 22-04-2016 IPR006504 Transcriptional regulator Spx/MgsR SII_RS02700 9586d8ed5b1cd59b47d64e808feff721 133 SUPERFAMILY SSF52833 1 124 9.91E-39 T 22-04-2016 IPR012336 Thioredoxin-like fold SII_RS02700 9586d8ed5b1cd59b47d64e808feff721 133 Hamap MF_01132 Regulatory protein Spx [spxA]. 1 131 36.173 T 22-04-2016 IPR023731 Regulatory protein Spx GO:0045892 SII_RS02700 9586d8ed5b1cd59b47d64e808feff721 133 Pfam PF03960 ArsC family 22 113 2.1E-24 T 22-04-2016 IPR006660 Arsenate reductase-like SII_RS02700 9586d8ed5b1cd59b47d64e808feff721 133 PANTHER PTHR30041:SF5 1 133 9.4E-70 T 22-04-2016 SII_RS02700 9586d8ed5b1cd59b47d64e808feff721 133 Gene3D G3DSA:3.40.30.10 1 124 9.7E-37 T 22-04-2016 IPR012336 Thioredoxin-like fold SII_RS02700 9586d8ed5b1cd59b47d64e808feff721 133 PANTHER PTHR30041 1 133 9.4E-70 T 22-04-2016 SII_RS04670 5f7acdb1218ed6b7346d0bfc463d2e2b 322 SUPERFAMILY SSF56112 12 284 2.59E-28 T 22-04-2016 IPR011009 Protein kinase-like domain SII_RS04670 5f7acdb1218ed6b7346d0bfc463d2e2b 322 Pfam PF01636 Phosphotransferase enzyme family 26 246 1.8E-14 T 22-04-2016 IPR002575 Aminoglycoside phosphotransferase SII_RS04670 5f7acdb1218ed6b7346d0bfc463d2e2b 322 Gene3D G3DSA:3.90.1200.10 122 287 1.3E-18 T 22-04-2016 SII_RS08555 670abdf64be691c54e54596c8882691b 80 PANTHER PTHR33498:SF1 5 76 4.3E-13 T 22-04-2016 SII_RS08555 670abdf64be691c54e54596c8882691b 80 PANTHER PTHR33498 5 76 4.3E-13 T 22-04-2016 SII_RS09075 3fc3ec8a6c3a0f6662e08bbadbb7fd6d 503 Gene3D G3DSA:3.20.20.80 2 495 3.6E-185 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 SII_RS09075 3fc3ec8a6c3a0f6662e08bbadbb7fd6d 503 PANTHER PTHR32438:SF5 2 498 2.0E-163 T 22-04-2016 SII_RS09075 3fc3ec8a6c3a0f6662e08bbadbb7fd6d 503 PANTHER PTHR32438 2 498 2.0E-163 T 22-04-2016 SII_RS09075 3fc3ec8a6c3a0f6662e08bbadbb7fd6d 503 SUPERFAMILY SSF51445 4 489 4.81E-168 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily SII_RS09075 3fc3ec8a6c3a0f6662e08bbadbb7fd6d 503 TIGRFAM TIGR00217 malQ: 4-alpha-glucanotransferase 2 495 1.1E-110 T 22-04-2016 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 SII_RS09075 3fc3ec8a6c3a0f6662e08bbadbb7fd6d 503 Pfam PF02446 4-alpha-glucanotransferase 10 474 7.2E-163 T 22-04-2016 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 SII_RS04135 b965d8562e279d968d846948d1202fbf 259 Pfam PF06182 ABC-2 family transporter protein 33 258 4.5E-40 T 22-04-2016 IPR010390 Protein of unknown function DUF990 SII_RS04135 b965d8562e279d968d846948d1202fbf 259 PANTHER PTHR36833:SF1 1 259 5.6E-46 T 22-04-2016 SII_RS04135 b965d8562e279d968d846948d1202fbf 259 PANTHER PTHR36833 1 259 5.6E-46 T 22-04-2016 SII_RS02420 1d98cb0c47bb6650aedc5bf97e84612a 281 Pfam PF01223 DNA/RNA non-specific endonuclease 112 277 2.0E-15 T 22-04-2016 IPR001604 DNA/RNA non-specific endonuclease GO:0003676|GO:0016787|GO:0046872 SII_RS02420 1d98cb0c47bb6650aedc5bf97e84612a 281 SMART SM00892 102 279 4.2E-24 T 22-04-2016 IPR001604 DNA/RNA non-specific endonuclease GO:0003676|GO:0016787|GO:0046872 SII_RS02420 1d98cb0c47bb6650aedc5bf97e84612a 281 ProSitePatterns PS01070 DNA/RNA non-specific endonucleases active site. 164 172 - T 22-04-2016 IPR018524 DNA/RNA non-specific endonuclease, active site GO:0003676|GO:0016787|GO:0046872 SII_RS03620 81829cdfba14e5dab629f246cce9fc42 62 PANTHER PTHR41284:SF1 1 59 3.1E-20 T 22-04-2016 SII_RS03620 81829cdfba14e5dab629f246cce9fc42 62 Pfam PF06855 YozE SAM-like fold 1 60 4.3E-19 T 22-04-2016 IPR023089 YozE SAM-like domain SII_RS03620 81829cdfba14e5dab629f246cce9fc42 62 PANTHER PTHR41284 1 59 3.1E-20 T 22-04-2016 SII_RS03620 81829cdfba14e5dab629f246cce9fc42 62 Gene3D G3DSA:1.10.150.260 1 62 7.6E-23 T 22-04-2016 IPR023089 YozE SAM-like domain SII_RS03620 81829cdfba14e5dab629f246cce9fc42 62 SUPERFAMILY SSF140652 1 62 2.22E-22 T 22-04-2016 IPR023089 YozE SAM-like domain SII_RS03185 c05a28457e9a0cea3a1ca8640857014b 278 Pfam PF08843 Nucleotidyl transferase AbiEii toxin, Type IV TA system 37 265 6.5E-27 T 22-04-2016 IPR014942 Nucleotidyl transferase AbiEii toxin, Type IV TA system SII_RS06750 ce70bd27bcac89f84ca7ef5d63cf68c7 480 Hamap MF_01941 Mid-cell-anchored protein Z [mapZ]. 1 480 23.875 T 22-04-2016 IPR030858 Mid-cell-anchored protein Z GO:0016021|GO:0051301 SII_RS09320 438f6b26e37a52becf58b9c0cf07adc3 244 SUPERFAMILY SSF55154 13 166 1.72E-5 T 22-04-2016 IPR033469 CYTH-like domain SII_RS09320 438f6b26e37a52becf58b9c0cf07adc3 244 Pfam PF09359 VTC domain 12 228 1.4E-27 T 22-04-2016 IPR018966 VTC domain SII_RS05950 638cdb5fd6159665a26389eaa4e4eda0 50 Pfam PF03047 COMC family 1 29 3.2E-9 T 22-04-2016 IPR004288 Competence protein, ComC GO:0005186 SII_RS07220 fe280ba5a8bdd2e5e6f12b91bad8800e 140 SUPERFAMILY SSF54637 4 137 3.5E-47 T 22-04-2016 IPR029069 HotDog domain SII_RS07220 fe280ba5a8bdd2e5e6f12b91bad8800e 140 Pfam PF07977 FabA-like domain 11 132 3.6E-36 T 22-04-2016 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 SII_RS07220 fe280ba5a8bdd2e5e6f12b91bad8800e 140 PANTHER PTHR30272 1 140 3.5E-79 T 22-04-2016 SII_RS07220 fe280ba5a8bdd2e5e6f12b91bad8800e 140 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 2 140 34.086 T 22-04-2016 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 SII_RS07220 fe280ba5a8bdd2e5e6f12b91bad8800e 140 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 2 137 8.6E-62 T 22-04-2016 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 SII_RS07220 fe280ba5a8bdd2e5e6f12b91bad8800e 140 Gene3D G3DSA:3.10.129.10 1 138 2.1E-55 T 22-04-2016 IPR029069 HotDog domain SII_RS08250 f324791a32709dea94bb7ff233df7a73 110 Pfam PF08797 HIRAN domain 7 79 6.7E-7 T 22-04-2016 IPR014905 HIRAN domain GO:0003676|GO:0008270|GO:0016818 SII_RS02330 ded8fe6da93d80d81a5887dbb39dda6d 404 PANTHER PTHR41312 2 404 1.0E-98 T 22-04-2016 SII_RS02330 ded8fe6da93d80d81a5887dbb39dda6d 404 Pfam PF12698 ABC-2 family transporter protein 19 373 3.4E-37 T 22-04-2016 SII_RS01205 1fc57bb48d1c505a85f19536da8892cf 182 Pfam PF02674 Colicin V production protein 2 166 1.5E-28 T 22-04-2016 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 SII_RS07680 1dd1bcb2b17b7d8da426200970d260f3 458 PANTHER PTHR33843:SF4 1 457 8.3E-216 T 22-04-2016 SII_RS07680 1dd1bcb2b17b7d8da426200970d260f3 458 PANTHER PTHR33843 1 457 8.3E-216 T 22-04-2016 SII_RS07680 1dd1bcb2b17b7d8da426200970d260f3 458 Pfam PF03611 PTS system sugar-specific permease component 10 408 2.6E-129 T 22-04-2016 IPR004703 Phosphotransferase system, sugar-specific permease component GO:0009401|GO:0016021 SII_RS02670 b8dcb24bddc6c8e29ba947128a614e1e 162 SUPERFAMILY SSF46785 13 140 2.39E-10 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SII_RS02670 b8dcb24bddc6c8e29ba947128a614e1e 162 PIRSF PIRSF006707 1 162 5.3E-26 T 22-04-2016 IPR026282 DNA-binding protein, MJ1563 type SII_RS02670 b8dcb24bddc6c8e29ba947128a614e1e 162 PANTHER PTHR38465 1 153 4.0E-13 T 22-04-2016 SII_RS02670 b8dcb24bddc6c8e29ba947128a614e1e 162 Gene3D G3DSA:1.10.10.10 9 89 9.2E-12 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SII_RS06875 a9e943b2690a81026832a09e7bbe5c2f 629 Pfam PF09972 Predicted membrane protein (DUF2207) 27 561 7.1E-75 T 22-04-2016 IPR018702 Protein of unknown function DUF2207, membrane SII_RS04240 c44f862d11453ca54ea8abca16fc2137 76 Pfam PF11184 Protein of unknown function (DUF2969) 1 75 6.0E-24 T 22-04-2016 IPR021351 Protein of unknown function DUF2969 SII_RS08385 9c2d41700b684fb5368e59d224a1e060 130 Pfam PF07006 Protein of unknown function (DUF1310) 9 123 6.5E-33 T 22-04-2016 IPR010738 Protein of unknown function DUF1310 SII_RS02230 5c01a28ec8aac037aaffd03f65b3406a 312 Pfam PF01368 DHH family 17 152 2.9E-12 T 22-04-2016 IPR001667 DDH domain SII_RS02230 5c01a28ec8aac037aaffd03f65b3406a 312 Pfam PF02272 DHHA1 domain 252 307 1.7E-5 T 22-04-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7 SII_RS02230 5c01a28ec8aac037aaffd03f65b3406a 312 Gene3D G3DSA:3.90.1640.10 15 189 3.3E-32 T 22-04-2016 SII_RS02230 5c01a28ec8aac037aaffd03f65b3406a 312 SUPERFAMILY SSF64182 14 303 4.97E-73 T 22-04-2016 SII_RS06470 a268f3e1974d9418d69ea866b7d48100 349 Pfam PF03799 Cell division protein FtsQ 233 339 1.2E-5 T 22-04-2016 IPR005548 Cell division protein FtsQ/DivIB SII_RS06470 a268f3e1974d9418d69ea866b7d48100 349 Pfam PF08478 POTRA domain, FtsQ-type 150 221 4.7E-15 T 22-04-2016 IPR013685 Polypeptide-transport-associated, FtsQ-type SII_RS06470 a268f3e1974d9418d69ea866b7d48100 349 Hamap MF_00912 Cell division protein DivIB [divIB]. 75 349 28.554 T 22-04-2016 IPR026580 Cell division protein DivIB SII_RS06470 a268f3e1974d9418d69ea866b7d48100 349 PANTHER PTHR37820 12 346 1.2E-43 T 22-04-2016 SII_RS00885 6f7a1f99cfda81ee337186e1e19276bd 237 Pfam PF13780 Domain of unknown function (DUF4176) 108 195 1.5E-10 T 22-04-2016 IPR025233 Protein of unknown function DUF4176 SII_RS02985 edc95b4e89ca48923312fd2957305f54 242 PANTHER PTHR37804 1 236 1.6E-43 T 22-04-2016 SII_RS02985 edc95b4e89ca48923312fd2957305f54 242 Pfam PF07949 YbbR-like protein 145 218 7.3E-10 T 22-04-2016 IPR012505 YbbR-like SII_RS02985 edc95b4e89ca48923312fd2957305f54 242 Pfam PF07949 YbbR-like protein 50 133 3.7E-12 T 22-04-2016 IPR012505 YbbR-like SII_RS04530 9813a6fb1e59462ec9a24a2dd329ddd2 316 Pfam PF02517 CAAX protease self-immunity 147 232 3.8E-19 T 22-04-2016 IPR003675 CAAX amino terminal protease GO:0016020 SII_RS03960 4df5e28bb64b218595c5e49c92811980 65 Pfam PF14311 Probable Zinc-ribbon domain 5 50 4.8E-6 T 22-04-2016 IPR025487 Probable Zinc-ribbon domain SII_RS01310 81e9efb356eb90d1be63b046ca99d16d 169 Pfam PF13787 Protein of unknown function with HXXEE motif 6 122 1.8E-21 T 22-04-2016 IPR025671 Protein of unknown function with HXXEE motif SII_RS06355 617c87afec1761364efc093e53dfbfb7 100 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 31 73 1.6E-8 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 SII_RS06355 617c87afec1761364efc093e53dfbfb7 100 SUPERFAMILY SSF53383 31 96 1.96E-7 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SII_RS06355 617c87afec1761364efc093e53dfbfb7 100 Gene3D G3DSA:3.40.640.10 30 73 1.1E-8 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SII_RS05125 ac0d2ed83fd718e78ee436efddce795c 497 Pfam PF14283 Domain of unknown function (DUF4366) 357 492 2.1E-19 T 22-04-2016 IPR025376 Domain of unknown function DUF4366 SII_RS07965 ad62b94ae4c75bd0044b636a0106f1a1 255 SUPERFAMILY SSF53167 22 252 1.44E-45 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 SII_RS07965 ad62b94ae4c75bd0044b636a0106f1a1 255 Gene3D G3DSA:3.40.50.1580 21 249 8.4E-43 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 SII_RS07965 ad62b94ae4c75bd0044b636a0106f1a1 255 Pfam PF01048 Phosphorylase superfamily 74 247 4.9E-17 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 SII_RS00915 afd366bc8001349be225e4c636ac3f86 109 Pfam PF15597 Immunity protein 59 6 105 8.9E-25 T 22-04-2016 IPR028954 Immunity protein 59 SII_RS01530 091901a4a1c1a39799ca40c72ec37bef 129 PANTHER PTHR34297 4 129 6.0E-35 T 22-04-2016 SII_RS01530 091901a4a1c1a39799ca40c72ec37bef 129 PANTHER PTHR34297:SF1 4 129 6.0E-35 T 22-04-2016 SII_RS01530 091901a4a1c1a39799ca40c72ec37bef 129 Pfam PF03780 Asp23 family, cell envelope-related function 6 108 4.0E-29 T 22-04-2016 IPR005531 Alkaline shock protein Asp23 SII_RS08980 0d0d7c635cb1e4add237b39b10359441 185 Pfam PF06998 Protein of unknown function (DUF1307) 112 178 5.8E-5 T 22-04-2016 IPR009736 Protein of unknown function DUF1307 SII_RS08980 0d0d7c635cb1e4add237b39b10359441 185 Gene3D G3DSA:3.30.1830.10 112 182 1.6E-8 T 22-04-2016 IPR009736 Protein of unknown function DUF1307 SII_RS08980 0d0d7c635cb1e4add237b39b10359441 185 SUPERFAMILY SSF160704 111 182 2.75E-6 T 22-04-2016 IPR009736 Protein of unknown function DUF1307 SII_RS08435 2afb3d10d6f494e3dd438ac939a191d1 121 Pfam PF06279 Protein of unknown function (DUF1033) 1 116 1.4E-48 T 22-04-2016 IPR010434 Protein of unknown function DUF1033 SII_RS01240 4b1cf9305dd486059a5875185ec66c5f 122 TIGRFAM TIGR04342 EXLDI: EXLDI protein 3 122 9.9E-33 T 22-04-2016 IPR027580 EXLDI protein SII_RS06380 cf802a86993ae962e463e567d6d70df2 170 SUPERFAMILY SSF54001 2 162 1.42E-26 T 22-04-2016 SII_RS06380 cf802a86993ae962e463e567d6d70df2 170 Pfam PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family 2 108 1.8E-12 T 22-04-2016 IPR024453 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family SII_RS06380 cf802a86993ae962e463e567d6d70df2 170 Gene3D G3DSA:2.30.30.330 2 164 5.0E-33 T 22-04-2016 SII_RS01740 c43a296878914a06cda84f5ac7f800aa 383 Pfam PF07261 Replication initiation and membrane attachment 252 324 3.7E-5 T 22-04-2016 IPR006343 Replication protein, DnaD/DnaB domain SII_RS03225 161304c08f24576510c6864b49c53b55 937 SUPERFAMILY SSF54001 809 918 5.3E-14 T 22-04-2016 SII_RS03225 161304c08f24576510c6864b49c53b55 937 Pfam PF05257 CHAP domain 812 911 9.7E-16 T 22-04-2016 IPR007921 CHAP domain SII_RS04325 9a25b364a98c0a0757497eaeb559b7d1 249 Gene3D G3DSA:3.20.20.140 3 247 3.2E-20 T 22-04-2016 SII_RS04325 9a25b364a98c0a0757497eaeb559b7d1 249 PANTHER PTHR21039 1 245 9.9E-22 T 22-04-2016 IPR010140 Histidinol phosphate phosphatase, HisJ GO:0000105|GO:0004401 KEGG: 00340+3.1.3.15|UniPathway: UPA00031 SII_RS04325 9a25b364a98c0a0757497eaeb559b7d1 249 SUPERFAMILY SSF89550 3 245 1.26E-27 T 22-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 SII_RS08055 34483975c8d4403cf82caba766c40026 76 Pfam PF04226 Transglycosylase associated protein 31 70 3.3E-8 T 22-04-2016 IPR007341 Transglycosylase-associated protein GO:0016021 SII_RS05885 15fc58e16e5f4d03b8cc3b3c83edaa0b 353 SUPERFAMILY SSF56601 97 329 2.22E-35 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SII_RS05885 15fc58e16e5f4d03b8cc3b3c83edaa0b 353 Gene3D G3DSA:3.40.710.10 92 340 5.4E-47 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SII_RS05885 15fc58e16e5f4d03b8cc3b3c83edaa0b 353 Pfam PF13354 Beta-lactamase enzyme family 122 312 4.2E-16 T 22-04-2016 SII_RS01235 7f6c02d6f79028c22b0ad50168bb2bc6 300 Pfam PF10026 Predicted Zn-dependent protease (DUF2268) 86 293 3.3E-65 T 22-04-2016 IPR018728 Domain of unknown function DUF2268 SII_RS04915 434dbad1ed6943b73822507091299900 435 Pfam PF09913 Predicted membrane protein (DUF2142) 19 390 4.2E-48 T 22-04-2016 IPR018674 Protein of unknown function DUF2142, membrane SII_RS08010 eec66fd5349f42e1c84539ad5fffa893 223 Pfam PF16316 Domain of unknown function (DUF4956) 53 139 1.7E-9 T 22-04-2016 IPR032531 Protein of unknown function DUF4956 SII_RS08280 a943ab8b8f556330f3b3f88d186104e9 267 Pfam PF01148 Cytidylyltransferase family 7 264 2.0E-69 T 22-04-2016 SII_RS08280 a943ab8b8f556330f3b3f88d186104e9 267 PANTHER PTHR13773 3 264 2.7E-64 T 22-04-2016 SII_RS08280 a943ab8b8f556330f3b3f88d186104e9 267 PANTHER PTHR13773:SF0 3 264 2.7E-64 T 22-04-2016 SII_RS08280 a943ab8b8f556330f3b3f88d186104e9 267 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 226 252 - T 22-04-2016 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00557 SII_RS01070 0fb1574fc8fb57148a61de56267432e8 223 PANTHER PTHR10794:SF37 38 223 2.2E-17 T 22-04-2016 SII_RS01070 0fb1574fc8fb57148a61de56267432e8 223 PANTHER PTHR10794 38 223 2.2E-17 T 22-04-2016 SII_RS01070 0fb1574fc8fb57148a61de56267432e8 223 Pfam PF02517 CAAX protease self-immunity 121 212 1.4E-16 T 22-04-2016 IPR003675 CAAX amino terminal protease GO:0016020 SII_RS07830 e583a4a3da22e84630e2a9ed2e8994c9 369 Pfam PF06114 Domain of unknown function (DUF955) 180 283 9.9E-10 T 22-04-2016 IPR010359 HTH domain, IrrE-type SII_RS04035 7bfefe966bb7b62e7af52b122b985db6 324 Pfam PF04245 37-kD nucleoid-associated bacterial protein 9 320 5.4E-34 T 22-04-2016 IPR007358 Nucleoid-associated protein NdpA GO:0009295 SII_RS01095 e338e27b2a382fadfcaa7d710f71e154 272 Gene3D G3DSA:1.10.3620.10 146 261 8.8E-39 T 22-04-2016 SII_RS06170 54e1e214384a8573291e6779a2f29106 287 Pfam PF01061 ABC-2 type transporter 3 220 6.2E-12 T 22-04-2016 IPR013525 ABC-2 type transporter GO:0016020 SII_RS03335 241be0547138e1faa254243b67eb0632 136 Gene3D G3DSA:4.10.1080.10 7 41 2.7E-4 T 22-04-2016 IPR028974 TSP type-3 repeat GO:0005509 SII_RS07495 048874b0a6850eae8e7df20e4bb2f11d 116 Gene3D G3DSA:1.10.10.41 38 115 1.1E-4 T 22-04-2016 IPR013034 DNA topoisomerase I, domain 1 GO:0003917 SII_RS05655 9ee421f478e67975966b887d3a0476d5 214 SUPERFAMILY SSF52540 2 198 1.26E-11 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS05655 9ee421f478e67975966b887d3a0476d5 214 Gene3D G3DSA:3.40.50.300 2 117 6.1E-10 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SII_RS03240 5732a32fcab61e6b5b4a746465b0e932 128 Pfam PF06125 Bacterial protein of unknown function (DUF961) 6 106 8.2E-37 T 22-04-2016 IPR010365 Protein of unknown function DUF961 SII_RS03420 3e4462034b19286119aa10e121f84262 89 Pfam PF11372 Domain of unknown function (DUF3173) 2 72 9.6E-25 T 22-04-2016 IPR021512 Protein of unknown function DUF3173 SII_RS01045 3907e67535ba1be85d198d775a59b687 231 Pfam PF03591 AzlC protein 15 154 1.9E-33 T 22-04-2016 IPR011606 Branched-chain amino acid transport, permease SII_RS01045 3907e67535ba1be85d198d775a59b687 231 PANTHER PTHR34979 4 228 1.5E-49 T 22-04-2016 SII_RS09040 4b95a22204ff2105cb6104fde8b18ac9 152 Pfam PF11457 Protein of unknown function (DUF3021) 3 146 1.5E-27 T 22-04-2016 IPR021560 Protein of unknown function DUF3021 SII_RS06065 e0472734a6b53798e67ca26cc12a8290 102 Pfam PF05987 Bacterial protein of unknown function (DUF898) 53 99 1.9E-8 T 22-04-2016 IPR010295 Protein of unknown function DUF898 SII_RS08255 82238b1f762f3b625d7710511c5a43b2 186 TIGRFAM TIGR04518 ECF_S_folT_fam: ECF transporter S component, folate family 8 172 2.3E-39 T 22-04-2016 IPR030949 ECF transporter S component, folate family SII_RS08255 82238b1f762f3b625d7710511c5a43b2 186 Pfam PF12822 Protein of unknown function (DUF3816) 13 167 6.6E-10 T 22-04-2016 IPR024529 ECF transporter, substrate-specific component GO:0005215 SII_RS08565 605142f95f8b4eea289962f86e0da7bf 135 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 6 83 2.6E-8 T 22-04-2016 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain GO:0004733|GO:0010181|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 SII_RS08565 605142f95f8b4eea289962f86e0da7bf 135 Gene3D G3DSA:2.30.110.10 6 129 1.6E-35 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 SII_RS08565 605142f95f8b4eea289962f86e0da7bf 135 SUPERFAMILY SSF50475 4 126 3.39E-19 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 SII_RS00515 7418989df1ad6a0842eb1cde3f1f8310 652 Pfam PF01496 V-type ATPase 116kDa subunit family 53 398 1.9E-12 T 22-04-2016 IPR002490 V-type ATPase, V0 complex, 116kDa subunit family GO:0015078|GO:0015991|GO:0033179 SII_RS02310 a8dd2cf0ce3c36c010fe8ceab8d54425 405 SUPERFAMILY SSF53474 38 199 2.13E-15 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SII_RS02310 a8dd2cf0ce3c36c010fe8ceab8d54425 405 Gene3D G3DSA:3.40.50.1820 8 201 6.6E-13 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SII_RS03520 76fd79f3fe4a6c0086f17bc9513fae44 64 Pfam PF11676 Protein of unknown function (DUF3272) 2 61 1.0E-28 T 22-04-2016 IPR021690 Protein of unknown function DUF3272 SII_RS00910 736d456587aad697e1783d5017fb55f9 110 Pfam PF15597 Immunity protein 59 8 102 4.1E-11 T 22-04-2016 IPR028954 Immunity protein 59 SII_RS02825 23b55455783abacfde6b35004a726087 187 Pfam PF12822 Protein of unknown function (DUF3816) 7 179 3.1E-20 T 22-04-2016 IPR024529 ECF transporter, substrate-specific component GO:0005215 SII_RS07950 81d1a342351f9c127ce08f0d0008e1cc 290 SUPERFAMILY SSF46689 228 264 5.82E-5 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SII_RS07950 81d1a342351f9c127ce08f0d0008e1cc 290 Pfam PF13556 PucR C-terminal helix-turn-helix domain 230 280 2.1E-13 T 22-04-2016 IPR025736 PucR C-terminal helix-turn-helix domain SII_RS07950 81d1a342351f9c127ce08f0d0008e1cc 290 Gene3D G3DSA:1.10.10.60 243 265 7.7E-7 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SII_RS08875 64f89afc62c6ecd724a7333e15edce22 354 Pfam PF14897 EpsG family 21 336 3.4E-20 T 22-04-2016 SII_RS09310 9761c83969a280451b030602d06ad903 484 Pfam PF14262 Domain of unknown function (DUF4353) 86 315 1.4E-73 T 22-04-2016 IPR025584 Carbohydrate-binding domain-containing protein Cthe_2159 SII_RS02965 e1421ffab13b6efd893087825f24f6b3 85 Pfam PF06305 Protein of unknown function (DUF1049) 24 79 8.5E-14 T 22-04-2016 IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 SII_RS05165 575f8364ec17100e7c43c75547ff322a 103 Gene3D G3DSA:2.40.50.140 4 83 1.5E-7 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SII_RS05165 575f8364ec17100e7c43c75547ff322a 103 SUPERFAMILY SSF50249 6 90 5.14E-8 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SII_RS02105 41c82fccc8dd7794d46f83ecf0405e75 234 TIGRFAM TIGR02206 intg_mem_TP0381: conserved hypothetical integral membrane protein TIGR02206 22 212 1.8E-25 T 22-04-2016 IPR011737 Conserved hypothetical protein CHP02206, TP0381 SII_RS02105 41c82fccc8dd7794d46f83ecf0405e75 234 Pfam PF09529 Integral membrane protein (intg_mem_TP0381) 20 215 1.9E-35 T 22-04-2016 IPR011737 Conserved hypothetical protein CHP02206, TP0381 SII_RS03855 9bd6f0262fdfaeccf2366cc285392555 174 Pfam PF07155 ECF-type riboflavin transporter, S component 8 172 2.6E-9 T 22-04-2016 IPR009825 ECF transporter, substrate-specific component-like GO:0016020 SII_RS06160 4054b052c45dfb3943adc2f665db2d2c 129 Pfam PF11457 Protein of unknown function (DUF3021) 1 124 2.0E-25 T 22-04-2016 IPR021560 Protein of unknown function DUF3021 SII_RS07800 9f0511b2b74def0e8f3460a880ac1328 122 Pfam PF05973 Phage derived protein Gp49-like (DUF891) 20 107 2.4E-20 T 22-04-2016 IPR009241 Toxin HigB-like SII_RS05930 61f60eefea026e5040c7dbdc7ac71576 74 Pfam PF10439 Bacteriocin class II with double-glycine leader peptide 6 61 4.1E-10 T 22-04-2016 IPR019493 Bacteriocin, class IIb, lactacin-related GO:0042742 SII_RS04930 f80f96efdcb0577db80fd64cfd178722 119 Pfam PF10066 Uncharacterized conserved protein (DUF2304) 4 107 3.5E-26 T 22-04-2016 IPR019277 Protein of unknown function DUF2304 SII_RS00855 901eb16633bc6b1569775db6f6e72f75 84 SUPERFAMILY SSF54236 5 82 3.08E-5 T 22-04-2016 IPR029071 Ubiquitin-related domain SII_RS03280 afbc1c34e35a5ffa43888b47dc39e41a 168 Pfam PF12648 TcpE family 44 144 2.0E-32 T 22-04-2016 IPR025608 TcpE family SII_RS03210 2932ca089631a720386ad2154457f48f 284 Pfam PF04610 TrbL/VirB6 plasmid conjugal transfer protein 128 269 1.3E-5 T 22-04-2016 IPR007688 Plasmid conjugal transfer TrbL/VirB6 GO:0030255 SII_RS09445 b9c874bed95ee8fcc289643cb98aea76 179 PIRSF PIRSF000847 1 178 4.0E-51 T 22-04-2016 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 SII_RS09445 b9c874bed95ee8fcc289643cb98aea76 179 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 51 73 - T 22-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 SII_RS09445 b9c874bed95ee8fcc289643cb98aea76 179 PANTHER PTHR14269 5 174 2.8E-48 T 22-04-2016 SII_RS09445 b9c874bed95ee8fcc289643cb98aea76 179 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 5 168 4.2E-52 T 22-04-2016 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 SII_RS09445 b9c874bed95ee8fcc289643cb98aea76 179 Pfam PF01066 CDP-alcohol phosphatidyltransferase 5 73 3.1E-18 T 22-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 SII_RS05265 60205245cfa9ee4ee573a7a7a2cdff8c 251 Pfam PF09659 CRISPR-associated protein (Cas_Csm6) 7 247 1.3E-27 T 22-04-2016 IPR013489 CRISPR-associated protein Csm6 SII_RS00905 030b7508a652d8001f018f5da3ca495e 111 Pfam PF15597 Immunity protein 59 9 107 8.8E-13 T 22-04-2016 IPR028954 Immunity protein 59 SII_RS01050 cd70df07b905bf2de457a16ac30bddf8 108 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 6 104 8.7E-22 T 22-04-2016 IPR008407 Branched-chain amino acid transport, AzlD SII_RS03275 e41d4cd291cd77a45b39a257a61c70d8 165 Pfam PF07275 Antirestriction protein (ArdA) 6 161 2.1E-42 T 22-04-2016 IPR009899 Antirestriction SII_RS03005 2ac1ae417687a98b858b646d7f9fc1cf 164 ProDom PD091538 PORE-FORMING FORMING PORE PEPTIDE EBSA PEPTIDE GBS1458 SMU.692 SAG1388 7 136 1.0E-32 T 22-04-2016 IPR020215 Pore-forming protein, EbsA SII_RS05920 09e59d46d5e691bdffd1e02daa0cf27d 73 Pfam PF10439 Bacteriocin class II with double-glycine leader peptide 9 71 3.3E-8 T 22-04-2016 IPR019493 Bacteriocin, class IIb, lactacin-related GO:0042742 SII_RS00825 ebab203b9c96f53a60de1f4e1e9720cb 219 Pfam PF13780 Domain of unknown function (DUF4176) 104 192 6.7E-11 T 22-04-2016 IPR025233 Protein of unknown function DUF4176 SII_RS06370 91a6278137a5d41c44169bf1c0c90901 252 Pfam PF02517 CAAX protease self-immunity 155 238 3.4E-10 T 22-04-2016 IPR003675 CAAX amino terminal protease GO:0016020 SII_RS08025 ac59e46261c02d35774d0e3fd7568472 481 Pfam PF16933 Putative exopolysaccharide Exporter (EPS-E) 1 452 1.4E-125 T 22-04-2016 IPR031617 Putative exopolysaccharide exporter