locus-tag class description SMA_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix SMA_RS00005 PF00308 Bacterial dnaA protein SMA_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain SMA_RS00010 PF02767 DNA polymerase III beta subunit, central domain SMA_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain SMA_RS00015 PF00781 Diacylglycerol kinase catalytic domain SMA_RS00025 PF01926 50S ribosome-binding GTPase SMA_RS00025 PF06071 Protein of unknown function (DUF933) SMA_RS00030 PF01195 Peptidyl-tRNA hydrolase SMA_RS00035 PF17757 UvrB interaction domain SMA_RS00035 PF00271 Helicase conserved C-terminal domain SMA_RS00035 PF00270 DEAD/DEAH box helicase SMA_RS00035 PF02559 CarD-like/TRCF domain SMA_RS00035 PF03461 TRCF domain SMA_RS00040 PF01479 S4 domain SMA_RS00060 PF01171 PP-loop family SMA_RS00065 PF00156 Phosphoribosyl transferase domain SMA_RS00070 PF06480 FtsH Extracellular SMA_RS00070 PF00004 ATPase family associated with various cellular activities (AAA) SMA_RS00070 PF17862 AAA+ lid domain SMA_RS00070 PF01434 Peptidase family M41 SMA_RS00200 PF04085 rod shape-determining protein MreC SMA_RS00210 PF01476 LysM domain SMA_RS00210 PF05257 CHAP domain SMA_RS00215 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase SMA_RS00215 PF14572 Phosphoribosyl synthetase-associated domain SMA_RS00220 PF00155 Aminotransferase class I and II SMA_RS00225 PF11967 Recombination protein O N terminal SMA_RS00225 PF02565 Recombination protein O C terminal SMA_RS00230 PF02504 Fatty acid synthesis protein SMA_RS00235 PF00550 Phosphopantetheine attachment site SMA_RS00240 PF01259 SAICAR synthetase SMA_RS00245 PF00586 AIR synthase related protein, N-terminal domain SMA_RS00245 PF02769 AIR synthase related protein, C-terminal domain SMA_RS00245 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain SMA_RS00250 PF00156 Phosphoribosyl transferase domain SMA_RS00250 PF13537 Glutamine amidotransferase domain SMA_RS00255 PF02769 AIR synthase related protein, C-terminal domain SMA_RS00255 PF00586 AIR synthase related protein, N-terminal domain SMA_RS00260 PF00551 Formyl transferase SMA_RS00270 PF02142 MGS-like domain SMA_RS00270 PF01808 AICARFT/IMPCHase bienzyme SMA_RS00285 PF01451 Low molecular weight phosphotyrosine protein phosphatase SMA_RS00295 PF01757 Acyltransferase family SMA_RS00300 PF00291 Pyridoxal-phosphate dependent enzyme SMA_RS00300 PF14821 Threonine synthase N terminus SMA_RS00305 PF01554 MatE SMA_RS00320 PF00196 Bacterial regulatory proteins, luxR family SMA_RS00320 PF00072 Response regulator receiver domain SMA_RS00335 PF00338 Ribosomal protein S10p/S20e SMA_RS00340 PF00297 Ribosomal protein L3 SMA_RS00345 PF00573 Ribosomal protein L4/L1 family SMA_RS00350 PF00276 Ribosomal protein L23 SMA_RS00355 PF03947 Ribosomal Proteins L2, C-terminal domain SMA_RS00355 PF00181 Ribosomal Proteins L2, RNA binding domain SMA_RS00360 PF00203 Ribosomal protein S19 SMA_RS00365 PF00237 Ribosomal protein L22p/L17e SMA_RS00370 PF07650 KH domain SMA_RS00370 PF00189 Ribosomal protein S3, C-terminal domain SMA_RS00375 PF00252 Ribosomal protein L16p/L10e SMA_RS00380 PF00831 Ribosomal L29 protein SMA_RS00385 PF00366 Ribosomal protein S17 SMA_RS00390 PF00238 Ribosomal protein L14p/L23e SMA_RS00395 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 SMA_RS00395 PF00467 KOW motif SMA_RS00400 PF00673 ribosomal L5P family C-terminus SMA_RS00400 PF00281 Ribosomal protein L5 SMA_RS00405 PF00253 Ribosomal protein S14p/S29e SMA_RS00410 PF00410 Ribosomal protein S8 SMA_RS00415 PF00347 Ribosomal protein L6 SMA_RS00420 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast SMA_RS00425 PF03719 Ribosomal protein S5, C-terminal domain SMA_RS00425 PF00333 Ribosomal protein S5, N-terminal domain SMA_RS00430 PF00327 Ribosomal protein L30p/L7e SMA_RS00435 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A SMA_RS00440 PF00344 SecY translocase SMA_RS00450 PF01176 Translation initiation factor 1A / IF-1 SMA_RS00455 PF00444 Ribosomal protein L36 SMA_RS00460 PF00416 Ribosomal protein S13/S18 SMA_RS00465 PF00411 Ribosomal protein S11 SMA_RS00470 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain SMA_RS00470 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain SMA_RS00470 PF01000 RNA polymerase Rpb3/RpoA insert domain SMA_RS00475 PF01196 Ribosomal protein L17 SMA_RS00495 PF13936 Helix-turn-helix domain SMA_RS00645 PF08544 GHMP kinases C terminal SMA_RS00645 PF00288 GHMP kinases N terminal domain SMA_RS00650 PF01047 MarR family SMA_RS00655 PF00005 ABC transporter SMA_RS00660 PF00950 ABC 3 transport family SMA_RS00665 PF01479 S4 domain SMA_RS00665 PF00579 tRNA synthetases class I (W and Y) SMA_RS00670 PF00912 Transglycosylase SMA_RS00670 PF00905 Penicillin binding protein transpeptidase domain SMA_RS00675 PF04565 RNA polymerase Rpb2, domain 3 SMA_RS00675 PF04560 RNA polymerase Rpb2, domain 7 SMA_RS00675 PF00562 RNA polymerase Rpb2, domain 6 SMA_RS00675 PF10385 RNA polymerase beta subunit external 1 domain SMA_RS00675 PF04563 RNA polymerase beta subunit SMA_RS00675 PF04561 RNA polymerase Rpb2, domain 2 SMA_RS00680 PF04983 RNA polymerase Rpb1, domain 3 SMA_RS00680 PF05000 RNA polymerase Rpb1, domain 4 SMA_RS00680 PF04997 RNA polymerase Rpb1, domain 1 SMA_RS00680 PF04998 RNA polymerase Rpb1, domain 5 SMA_RS00680 PF00623 RNA polymerase Rpb1, domain 2 SMA_RS00690 PF00437 Type II/IV secretion system protein SMA_RS00695 PF00482 Type II secretion system (T2SS), protein F SMA_RS00700 PF07963 Prokaryotic N-terminal methylation motif SMA_RS00730 PF00871 Acetokinase family SMA_RS00750 PF02517 CPBP intramembrane metalloprotease SMA_RS00760 PF02844 Phosphoribosylglycinamide synthetase, N domain SMA_RS00760 PF02843 Phosphoribosylglycinamide synthetase, C domain SMA_RS00760 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain SMA_RS00765 PF04463 Protein of unknown function (DUF523) SMA_RS00770 PF00731 AIR carboxylase SMA_RS00775 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain SMA_RS00775 PF02222 ATP-grasp domain SMA_RS00785 PF00206 Lyase SMA_RS00785 PF10397 Adenylosuccinate lyase C-terminus SMA_RS00790 PF03807 NADP oxidoreductase coenzyme F420-dependent SMA_RS00790 PF14748 Pyrroline-5-carboxylate reductase dimerisation SMA_RS00795 PF05343 M42 glutamyl aminopeptidase SMA_RS00805 PF00085 Thioredoxin SMA_RS00810 PF01588 Putative tRNA binding domain SMA_RS00810 PF14794 Domain of unknown function (DUF4479) SMA_RS00815 PF00436 Single-strand binding protein family SMA_RS00820 PF04143 Sulphur transport SMA_RS00825 PF01206 Sulfurtransferase TusA SMA_RS00835 PF13407 Periplasmic binding protein domain SMA_RS00840 PF07730 Histidine kinase SMA_RS00845 PF00196 Bacterial regulatory proteins, luxR family SMA_RS00845 PF00072 Response regulator receiver domain SMA_RS00865 PF03609 PTS system sorbose-specific iic component SMA_RS00870 PF03613 PTS system mannose/fructose/sorbose family IID component SMA_RS00880 PF02653 Branched-chain amino acid transport system / permease component SMA_RS00885 PF09383 NIL domain SMA_RS00885 PF00005 ABC transporter SMA_RS00890 PF00166 Chaperonin 10 Kd subunit SMA_RS00895 PF00118 TCP-1/cpn60 chaperonin family SMA_RS00900 PF01381 Helix-turn-helix SMA_RS00905 PF01610 Transposase SMA_RS00905 PF13683 Integrase core domain SMA_RS00915 PF00849 RNA pseudouridylate synthase SMA_RS00915 PF01479 S4 domain SMA_RS00930 PF07690 Major Facilitator Superfamily SMA_RS00945 PF00912 Transglycosylase SMA_RS00945 PF00905 Penicillin binding protein transpeptidase domain SMA_RS00955 PF00467 KOW motif SMA_RS00955 PF02357 Transcription termination factor nusG SMA_RS00965 PF01734 Patatin-like phospholipase SMA_RS00970 PF09334 tRNA synthetases class I (M) SMA_RS00970 PF13603 Leucyl-tRNA synthetase, Domain 2 SMA_RS00970 PF00133 tRNA synthetases class I (I, L, M and V) SMA_RS00970 PF08264 Anticodon-binding domain of tRNA SMA_RS00985 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SMA_RS00985 PF07992 Pyridine nucleotide-disulphide oxidoreductase SMA_RS00995 PF00155 Aminotransferase class I and II SMA_RS01040 PF16193 AAA C-terminal domain SMA_RS01040 PF12002 MgsA AAA+ ATPase C terminal SMA_RS01040 PF05496 Holliday junction DNA helicase RuvB P-loop domain SMA_RS01065 PF04452 RNA methyltransferase SMA_RS01075 PF00367 phosphotransferase system, EIIB SMA_RS01075 PF02378 Phosphotransferase system, EIIC SMA_RS01075 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 SMA_RS01080 PF03372 Endonuclease/Exonuclease/phosphatase family SMA_RS01085 PF05343 M42 glutamyl aminopeptidase SMA_RS01090 PF07972 NrdI Flavodoxin like SMA_RS01110 PF00392 Bacterial regulatory proteins, gntR family SMA_RS01110 PF07702 UTRA domain SMA_RS01115 PF01238 Phosphomannose isomerase type I SMA_RS01130 PF00528 Binding-protein-dependent transport system inner membrane component SMA_RS01145 PF00392 Bacterial regulatory proteins, gntR family SMA_RS01145 PF07702 UTRA domain SMA_RS01165 PF13291 ACT domain SMA_RS01165 PF04607 Region found in RelA / SpoT proteins SMA_RS01165 PF02824 TGS domain SMA_RS01170 PF02580 D-Tyr-tRNA(Tyr) deacylase SMA_RS01175 PF13556 PucR C-terminal helix-turn-helix domain SMA_RS01180 PF00005 ABC transporter SMA_RS01180 PF17912 MalK OB fold domain SMA_RS01180 PF03459 TOBE domain SMA_RS01185 PF00455 DeoR C terminal sensor domain SMA_RS01185 PF08220 DeoR-like helix-turn-helix domain SMA_RS01190 PF02502 Ribose/Galactose Isomerase SMA_RS01195 PF02502 Ribose/Galactose Isomerase SMA_RS01200 PF00294 pfkB family carbohydrate kinase SMA_RS01205 PF01791 DeoC/LacD family aldolase SMA_RS01220 PF03611 PTS system sugar-specific permease component SMA_RS01225 PF01263 Aldose 1-epimerase SMA_RS01230 PF00874 PRD domain SMA_RS01230 PF03123 CAT RNA binding domain SMA_RS01235 PF00232 Glycosyl hydrolase family 1 SMA_RS01240 PF00874 PRD domain SMA_RS01240 PF03123 CAT RNA binding domain SMA_RS01245 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit SMA_RS01250 PF02378 Phosphotransferase system, EIIC SMA_RS01250 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SMA_RS01255 PF00232 Glycosyl hydrolase family 1 SMA_RS01270 PF12833 Helix-turn-helix domain SMA_RS01270 PF02311 AraC-like ligand binding domain SMA_RS01275 PF16874 Glycosyl hydrolase family 36 C-terminal domain SMA_RS01275 PF16875 Glycosyl hydrolase family 36 N-terminal domain SMA_RS01280 PF01547 Bacterial extracellular solute-binding protein SMA_RS01285 PF00528 Binding-protein-dependent transport system inner membrane component SMA_RS01290 PF00528 Binding-protein-dependent transport system inner membrane component SMA_RS01295 PF00128 Alpha amylase, catalytic domain SMA_RS01300 PF00128 Alpha amylase, catalytic domain SMA_RS01305 PF00356 Bacterial regulatory proteins, lacI family SMA_RS01310 PF08544 GHMP kinases C terminal SMA_RS01310 PF10509 Galactokinase galactose-binding signature SMA_RS01310 PF00288 GHMP kinases N terminal domain SMA_RS01315 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain SMA_RS01315 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain SMA_RS01320 PF16363 GDP-mannose 4,6 dehydratase SMA_RS01330 PF02699 Preprotein translocase subunit SMA_RS01335 PF01255 Putative undecaprenyl diphosphate synthase SMA_RS01345 PF13180 PDZ domain SMA_RS01345 PF02163 Peptidase family M50 SMA_RS01350 PF04073 Aminoacyl-tRNA editing domain SMA_RS01350 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SMA_RS01350 PF03129 Anticodon binding domain SMA_RS01355 PF14480 DNA polymerase III polC-type N-terminus I SMA_RS01355 PF11490 DNA polymerase III polC-type N-terminus II SMA_RS01355 PF07733 Bacterial DNA polymerase III alpha NTPase domain SMA_RS01355 PF00929 Exonuclease SMA_RS01355 PF17657 Bacterial DNA polymerase III alpha subunit finger domain SMA_RS01355 PF02811 PHP domain SMA_RS01370 PF01327 Polypeptide deformylase SMA_RS01385 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SMA_RS01395 PF00312 Ribosomal protein S15 SMA_RS01415 PF03725 3' exoribonuclease family, domain 2 SMA_RS01415 PF01138 3' exoribonuclease family, domain 1 SMA_RS01415 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain SMA_RS01415 PF00013 KH domain SMA_RS01415 PF00575 S1 RNA binding domain SMA_RS01425 PF00132 Bacterial transferase hexapeptide (six repeats) SMA_RS01430 PF01406 tRNA synthetases class I (C) catalytic domain SMA_RS01430 PF09190 DALR domain SMA_RS01435 PF00636 Ribonuclease III domain SMA_RS01440 PF00588 SpoU rRNA Methylase family SMA_RS01440 PF08032 RNA 2'-O ribose methyltransferase substrate binding SMA_RS01450 PF02645 Uncharacterised protein, DegV family COG1307 SMA_RS01460 PF00572 Ribosomal protein L13 SMA_RS01465 PF00380 Ribosomal protein S9/S16 SMA_RS01475 PF12950 TaqI-like C-terminal specificity domain SMA_RS01475 PF07669 Eco57I restriction-modification methylase SMA_RS01480 PF07669 Eco57I restriction-modification methylase SMA_RS01485 PF07693 KAP family P-loop domain SMA_RS01490 PF00270 DEAD/DEAH box helicase SMA_RS01490 PF17191 RecG wedge domain SMA_RS01490 PF13749 Putative ATP-dependent DNA helicase recG C-terminal SMA_RS01505 PF13276 HTH-like domain SMA_RS01505 PF00665 Integrase core domain SMA_RS01505 PF13333 Integrase core domain SMA_RS01510 PF03965 Penicillinase repressor SMA_RS01515 PF00403 Heavy-metal-associated domain SMA_RS01520 PF00403 Heavy-metal-associated domain SMA_RS01535 PF01022 Bacterial regulatory protein, arsR family SMA_RS01580 PF05167 Uncharacterised ACR (DUF711) SMA_RS01585 PF00300 Histidine phosphatase superfamily (branch 1) SMA_RS01590 PF02557 D-alanyl-D-alanine carboxypeptidase SMA_RS01595 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase SMA_RS01595 PF13457 GW (Gly-Tryp) dipeptide domain SMA_RS01600 PF01628 HrcA protein C terminal domain SMA_RS01600 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding SMA_RS01605 PF01025 GrpE SMA_RS01610 PF00012 Hsp70 protein SMA_RS01615 PF01556 DnaJ C terminal domain SMA_RS01615 PF00684 DnaJ central domain SMA_RS01615 PF00226 DnaJ domain SMA_RS01620 PF01416 tRNA pseudouridine synthase SMA_RS01625 PF02581 Thiamine monophosphate synthase SMA_RS01625 PF08543 Phosphomethylpyrimidine kinase SMA_RS01635 PF04260 Protein of unknown function (DUF436) SMA_RS01640 PF00924 Mechanosensitive ion channel SMA_RS01645 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase SMA_RS01645 PF05697 Bacterial trigger factor protein (TF) SMA_RS01645 PF05698 Bacterial trigger factor protein (TF) C-terminus SMA_RS01650 PF05066 HB1, ASXL, restriction endonuclease HTH domain SMA_RS01655 PF06418 CTP synthase N-terminus SMA_RS01655 PF00117 Glutamine amidotransferase class-I SMA_RS01670 PF01610 Transposase SMA_RS01670 PF13683 Integrase core domain SMA_RS01675 PF01116 Fructose-bisphosphate aldolase class-II SMA_RS01695 PF00004 ATPase family associated with various cellular activities (AAA) SMA_RS01695 PF17866 AAA lid domain SMA_RS01700 PF14659 Phage integrase, N-terminal SAM-like domain SMA_RS01700 PF00589 Phage integrase family SMA_RS01710 PF13610 DDE domain SMA_RS01735 PF13411 MerR HTH family regulatory protein SMA_RS01740 PF13610 DDE domain SMA_RS01745 PF01022 Bacterial regulatory protein, arsR family SMA_RS01750 PF00403 Heavy-metal-associated domain SMA_RS01755 PF13610 DDE domain SMA_RS01760 PF05532 CsbD-like SMA_RS01765 PF03780 Asp23 family, cell envelope-related function SMA_RS01780 PF04226 Transglycosylase associated protein SMA_RS01785 PF06100 MCRA family SMA_RS01810 PF03641 Possible lysine decarboxylase SMA_RS01815 PF00528 Binding-protein-dependent transport system inner membrane component SMA_RS01825 PF00528 Binding-protein-dependent transport system inner membrane component SMA_RS01830 PF00005 ABC transporter SMA_RS01830 PF00571 CBS domain SMA_RS01840 PF00872 Transposase, Mutator family SMA_RS01850 PF00830 Ribosomal L28 family SMA_RS01855 PF03780 Asp23 family, cell envelope-related function SMA_RS01860 PF13684 Dihydroxyacetone kinase family SMA_RS01860 PF02734 DAK2 domain SMA_RS01865 PF00920 Dehydratase family SMA_RS01870 PF00205 Thiamine pyrophosphate enzyme, central domain SMA_RS01870 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SMA_RS01870 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SMA_RS01875 PF01842 ACT domain SMA_RS01875 PF10369 Small subunit of acetolactate synthase SMA_RS01880 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain SMA_RS01880 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain SMA_RS01885 PF00291 Pyridoxal-phosphate dependent enzyme SMA_RS01885 PF00585 C-terminal regulatory domain of Threonine dehydratase SMA_RS01900 PF00005 ABC transporter SMA_RS01905 PF00528 Binding-protein-dependent transport system inner membrane component SMA_RS01915 PF02673 Bacitracin resistance protein BacA SMA_RS01920 PF05389 Negative regulator of genetic competence (MecA) SMA_RS01925 PF00953 Glycosyl transferase family 4 SMA_RS01930 PF00005 ABC transporter SMA_RS01935 PF01458 Uncharacterized protein family (UPF0051) SMA_RS01940 PF00266 Aminotransferase class-V SMA_RS01945 PF01592 NifU-like N terminal domain SMA_RS01950 PF01458 Uncharacterized protein family (UPF0051) SMA_RS01955 PF00768 D-alanyl-D-alanine carboxypeptidase SMA_RS01955 PF07943 Penicillin-binding protein 5, C-terminal domain SMA_RS01960 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SMA_RS01965 PF00528 Binding-protein-dependent transport system inner membrane component SMA_RS01970 PF12911 N-terminal TM domain of oligopeptide transport permease C SMA_RS01970 PF00528 Binding-protein-dependent transport system inner membrane component SMA_RS01975 PF00005 ABC transporter SMA_RS01975 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SMA_RS01980 PF00005 ABC transporter SMA_RS01980 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SMA_RS02015 PF13840 ACT domain SMA_RS02015 PF00696 Amino acid kinase family SMA_RS02020 PF13419 Haloacid dehalogenase-like hydrolase SMA_RS02025 PF00378 Enoyl-CoA hydratase/isomerase SMA_RS02035 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III SMA_RS02035 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal SMA_RS02040 PF00550 Phosphopantetheine attachment site SMA_RS02045 PF03060 Nitronate monooxygenase SMA_RS02050 PF00698 Acyl transferase domain SMA_RS02060 PF00109 Beta-ketoacyl synthase, N-terminal domain SMA_RS02060 PF02801 Beta-ketoacyl synthase, C-terminal domain SMA_RS02065 PF00364 Biotin-requiring enzyme SMA_RS02070 PF07977 FabA-like domain SMA_RS02075 PF02785 Biotin carboxylase C-terminal domain SMA_RS02075 PF00289 Biotin carboxylase, N-terminal domain SMA_RS02075 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain SMA_RS02080 PF01039 Carboxyl transferase domain SMA_RS02080 PF17848 Acetyl-coA carboxylase zinc finger domain SMA_RS02085 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit SMA_RS02090 PF02403 Seryl-tRNA synthetase N-terminal domain SMA_RS02090 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SMA_RS02100 PF03613 PTS system mannose/fructose/sorbose family IID component SMA_RS02105 PF03609 PTS system sorbose-specific iic component SMA_RS02110 PF03610 PTS system fructose IIA component SMA_RS02110 PF03830 PTS system sorbose subfamily IIB component SMA_RS02130 PF00860 Permease family SMA_RS02135 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE SMA_RS02145 PF03816 Cell envelope-related transcriptional attenuator domain SMA_RS02155 PF01230 HIT domain SMA_RS02160 PF00005 ABC transporter SMA_RS02165 PF05975 Bacterial ABC transporter protein EcsB SMA_RS02175 PF02390 Putative methyltransferase SMA_RS02200 PF17384 RimP C-terminal SH3 domain SMA_RS02200 PF02576 RimP N-terminal domain SMA_RS02205 PF00575 S1 RNA binding domain SMA_RS02205 PF08529 NusA N-terminal domain SMA_RS02205 PF13184 NusA-like KH domain SMA_RS02210 PF04296 Protein of unknown function (DUF448) SMA_RS02215 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family SMA_RS02220 PF04760 Translation initiation factor IF-2, N-terminal region SMA_RS02220 PF11987 Translation-initiation factor 2 SMA_RS02220 PF00009 Elongation factor Tu GTP binding domain SMA_RS02225 PF02033 Ribosome-binding factor A SMA_RS02230 PF03641 Possible lysine decarboxylase SMA_RS02240 PF03965 Penicillinase repressor SMA_RS02245 PF00403 Heavy-metal-associated domain SMA_RS02255 PF03458 UPF0126 domain SMA_RS02270 PF02645 Uncharacterised protein, DegV family COG1307 SMA_RS02290 PF01979 Amidohydrolase family SMA_RS02295 PF02091 Glycyl-tRNA synthetase alpha subunit SMA_RS02300 PF02092 Glycyl-tRNA synthetase beta subunit SMA_RS02305 PF05979 Bacterial protein of unknown function (DUF896) SMA_RS02320 PF00456 Transketolase, thiamine diphosphate binding domain SMA_RS02320 PF02779 Transketolase, pyrimidine binding domain SMA_RS02320 PF02780 Transketolase, C-terminal domain SMA_RS02330 PF00005 ABC transporter SMA_RS02340 PF00696 Amino acid kinase family SMA_RS02345 PF00171 Aldehyde dehydrogenase family SMA_RS02350 PF01795 MraW methylase family SMA_RS02360 PF00905 Penicillin binding protein transpeptidase domain SMA_RS02360 PF03793 PASTA domain SMA_RS02360 PF03717 Penicillin-binding Protein dimerisation domain SMA_RS02365 PF00953 Glycosyl transferase family 4 SMA_RS02365 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 SMA_RS02370 PF01610 Transposase SMA_RS02370 PF13683 Integrase core domain SMA_RS02375 PF00270 DEAD/DEAH box helicase SMA_RS02375 PF00271 Helicase conserved C-terminal domain SMA_RS02385 PF00528 Binding-protein-dependent transport system inner membrane component SMA_RS02390 PF00005 ABC transporter SMA_RS02400 PF07992 Pyridine nucleotide-disulphide oxidoreductase SMA_RS02405 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain SMA_RS02405 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain SMA_RS02405 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family SMA_RS02410 PF02540 NAD synthase SMA_RS02415 PF03051 Peptidase C1-like family SMA_RS02420 PF00912 Transglycosylase SMA_RS02420 PF00905 Penicillin binding protein transpeptidase domain SMA_RS02425 PF03838 Recombination protein U SMA_RS02430 PF06908 YspA SLOG family SMA_RS02435 PF05103 DivIVA protein SMA_RS02440 PF01170 Putative RNA methylase family UPF0020 SMA_RS02440 PF02926 THUMP domain SMA_RS02445 PF18708 MapZ extracellular C-terminal domain 2 SMA_RS02445 PF18041 MapZ extracellular domain 1 SMA_RS02450 PF00106 short chain dehydrogenase SMA_RS02465 PF02664 S-Ribosylhomocysteinase (LuxS) SMA_RS02470 PF12072 Domain of unknown function (DUF3552) SMA_RS02470 PF00013 KH domain SMA_RS02470 PF01966 HD domain SMA_RS02475 PF00625 Guanylate kinase SMA_RS02480 PF01192 RNA polymerase Rpb6 SMA_RS02485 PF17764 3′ DNA-binding domain (3′BD) SMA_RS02485 PF18074 Primosomal protein N C-terminal domain SMA_RS02485 PF04851 Type III restriction enzyme, res subunit SMA_RS02485 PF00271 Helicase conserved C-terminal domain SMA_RS02485 PF18319 PriA DNA helicase Cys-rich region (CRR) domain SMA_RS02495 PF01189 16S rRNA methyltransferase RsmB/F SMA_RS02495 PF01029 NusB family SMA_RS02505 PF03793 PASTA domain SMA_RS02505 PF00069 Protein kinase domain SMA_RS02515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMA_RS02515 PF07730 Histidine kinase SMA_RS02520 PF00072 Response regulator receiver domain SMA_RS02520 PF00196 Bacterial regulatory proteins, luxR family SMA_RS02525 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD SMA_RS02530 PF00575 S1 RNA binding domain SMA_RS02535 PF00291 Pyridoxal-phosphate dependent enzyme SMA_RS02540 PF01205 Uncharacterized protein family UPF0029 SMA_RS02540 PF09186 Domain of unknown function (DUF1949) SMA_RS02545 PF00271 Helicase conserved C-terminal domain SMA_RS02545 PF04851 Type III restriction enzyme, res subunit SMA_RS02555 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus SMA_RS02555 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein SMA_RS02620 PF04167 Protein of unknown function (DUF402) SMA_RS02625 PF02631 RecX family SMA_RS02635 PF05958 tRNA (Uracil-5-)-methyltransferase SMA_RS02635 PF01938 TRAM domain SMA_RS02650 PF00403 Heavy-metal-associated domain SMA_RS02655 PF00403 Heavy-metal-associated domain SMA_RS02665 PF13545 Crp-like helix-turn-helix domain SMA_RS02665 PF00027 Cyclic nucleotide-binding domain SMA_RS02675 PF13610 DDE domain SMA_RS02685 PF00027 Cyclic nucleotide-binding domain SMA_RS02685 PF13545 Crp-like helix-turn-helix domain SMA_RS02690 PF07972 NrdI Flavodoxin like SMA_RS02695 PF02867 Ribonucleotide reductase, barrel domain SMA_RS02695 PF00317 Ribonucleotide reductase, all-alpha domain SMA_RS02695 PF08343 Ribonucleotide reductase N-terminal SMA_RS02705 PF08534 Redoxin SMA_RS02710 PF00268 Ribonucleotide reductase, small chain SMA_RS02720 PF00583 Acetyltransferase (GNAT) family SMA_RS02735 PF01712 Deoxynucleoside kinase SMA_RS02765 PF03352 Methyladenine glycosylase SMA_RS02765 PF00117 Glutamine amidotransferase class-I SMA_RS02765 PF00958 GMP synthase C terminal domain SMA_RS02765 PF13302 Acetyltransferase (GNAT) domain SMA_RS02765 PF13673 Acetyltransferase (GNAT) domain SMA_RS02775 PF00133 tRNA synthetases class I (I, L, M and V) SMA_RS02775 PF10458 Valyl tRNA synthetase tRNA binding arm SMA_RS02775 PF08264 Anticodon-binding domain of tRNA SMA_RS02805 PF03590 Aspartate-ammonia ligase SMA_RS02820 PF01467 Cytidylyltransferase-like SMA_RS02825 PF05362 Lon protease (S16) C-terminal proteolytic domain SMA_RS02825 PF13180 PDZ domain SMA_RS02850 PF02872 5'-nucleotidase, C-terminal domain SMA_RS02855 PF06265 Protein of unknown function (DUF1027) SMA_RS02860 PF04055 Radical SAM superfamily SMA_RS02870 PF00664 ABC transporter transmembrane region SMA_RS02870 PF00005 ABC transporter SMA_RS02875 PF00664 ABC transporter transmembrane region SMA_RS02875 PF00005 ABC transporter SMA_RS02880 PF00005 ABC transporter SMA_RS02890 PF07730 Histidine kinase SMA_RS02895 PF00072 Response regulator receiver domain SMA_RS02895 PF00196 Bacterial regulatory proteins, luxR family SMA_RS02915 PF04715 Anthranilate synthase component I, N terminal region SMA_RS02915 PF00425 chorismate binding enzyme SMA_RS02920 PF00117 Glutamine amidotransferase class-I SMA_RS02925 PF02885 Glycosyl transferase family, helical bundle domain SMA_RS02925 PF00591 Glycosyl transferase family, a/b domain SMA_RS02930 PF00218 Indole-3-glycerol phosphate synthase SMA_RS02935 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase SMA_RS02940 PF00291 Pyridoxal-phosphate dependent enzyme SMA_RS02945 PF00290 Tryptophan synthase alpha chain SMA_RS02950 PF01566 Natural resistance-associated macrophage protein SMA_RS02960 PF00210 Ferritin-like domain SMA_RS02970 PF00480 ROK family SMA_RS03005 PF00679 Elongation factor G C-terminus SMA_RS03005 PF14492 Elongation Factor G, domain II SMA_RS03005 PF00009 Elongation factor Tu GTP binding domain SMA_RS03005 PF03144 Elongation factor Tu domain 2 SMA_RS03015 PF02875 Mur ligase family, glutamate ligase domain SMA_RS03015 PF08245 Mur ligase middle domain SMA_RS03020 PF04101 Glycosyltransferase family 28 C-terminal domain SMA_RS03020 PF03033 Glycosyltransferase family 28 N-terminal domain SMA_RS03025 PF08478 POTRA domain, FtsQ-type SMA_RS03030 PF02491 SHS2 domain inserted in FTSA SMA_RS03030 PF11983 Membrane-attachment and polymerisation-promoting switch SMA_RS03035 PF00091 Tubulin/FtsZ family, GTPase domain SMA_RS03035 PF12327 FtsZ family, C-terminal domain SMA_RS03040 PF01168 Alanine racemase, N-terminal domain SMA_RS03045 PF04472 Cell division protein SepF SMA_RS03060 PF05103 DivIVA protein SMA_RS03065 PF08264 Anticodon-binding domain of tRNA SMA_RS03065 PF00133 tRNA synthetases class I (I, L, M and V) SMA_RS03080 PF10431 C-terminal, D2-small domain, of ClpB protein SMA_RS03080 PF17871 AAA lid domain SMA_RS03080 PF07724 AAA domain (Cdc48 subfamily) SMA_RS03080 PF00004 ATPase family associated with various cellular activities (AAA) SMA_RS03090 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain SMA_RS03090 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain SMA_RS03095 PF08796 Protein of unknown function (DUF1797) SMA_RS03100 PF00528 Binding-protein-dependent transport system inner membrane component SMA_RS03105 PF00005 ABC transporter SMA_RS03115 PF07670 Nucleoside recognition SMA_RS03115 PF02421 Ferrous iron transport protein B SMA_RS03115 PF17910 FeoB cytosolic helical domain SMA_RS03115 PF07664 Ferrous iron transport protein B C terminus SMA_RS03125 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain SMA_RS03125 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain SMA_RS03130 PF01256 Carbohydrate kinase SMA_RS03145 PF02601 Exonuclease VII, large subunit SMA_RS03145 PF13742 OB-fold nucleic acid binding domain SMA_RS03150 PF02609 Exonuclease VII small subunit SMA_RS03155 PF00348 Polyprenyl synthetase SMA_RS03160 PF01479 S4 domain SMA_RS03160 PF01728 FtsJ-like methyltransferase SMA_RS03165 PF02863 Arginine repressor, C-terminal domain SMA_RS03165 PF01316 Arginine repressor, DNA binding domain SMA_RS03170 PF13476 AAA domain SMA_RS03175 PF02645 Uncharacterised protein, DegV family COG1307 SMA_RS03180 PF13472 GDSL-like Lipase/Acylhydrolase family SMA_RS03185 PF09911 Uncharacterized protein conserved in bacteria (DUF2140) SMA_RS03190 PF00216 Bacterial DNA-binding protein SMA_RS03200 PF00854 POT family SMA_RS03205 PF01180 Dihydroorotate dehydrogenase SMA_RS03215 PF01022 Bacterial regulatory protein, arsR family SMA_RS03220 PF00403 Heavy-metal-associated domain SMA_RS03225 PF00893 Small Multidrug Resistance protein SMA_RS03230 PF00300 Histidine phosphatase superfamily (branch 1) SMA_RS03235 PF02829 3H domain SMA_RS03235 PF08279 HTH domain SMA_RS03245 PF00905 Penicillin binding protein transpeptidase domain SMA_RS03245 PF03717 Penicillin-binding Protein dimerisation domain SMA_RS03250 PF13662 Toprim domain SMA_RS03250 PF02132 RecR protein SMA_RS03255 PF01820 D-ala D-ala ligase N-terminus SMA_RS03255 PF07478 D-ala D-ala ligase C-terminus SMA_RS03260 PF07155 ECF-type riboflavin transporter, S component SMA_RS03265 PF08245 Mur ligase middle domain SMA_RS03265 PF02875 Mur ligase family, glutamate ligase domain SMA_RS03265 PF01225 Mur ligase family, catalytic domain SMA_RS03275 PF00009 Elongation factor Tu GTP binding domain SMA_RS03275 PF16658 Class II release factor RF3, C-terminal domain SMA_RS03275 PF03144 Elongation factor Tu domain 2 SMA_RS03280 PF00271 Helicase conserved C-terminal domain SMA_RS03280 PF00270 DEAD/DEAH box helicase SMA_RS03285 PF01541 GIY-YIG catalytic domain SMA_RS03290 PF05175 Methyltransferase small domain SMA_RS03295 PF01553 Acyltransferase SMA_RS03300 PF10531 SLBB domain SMA_RS03305 PF13567 Domain of unknown function (DUF4131) SMA_RS03305 PF03772 Competence protein SMA_RS03305 PF00753 Metallo-beta-lactamase superfamily SMA_RS03310 PF06144 DNA polymerase III, delta subunit SMA_RS03315 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain SMA_RS03315 PF02777 Iron/manganese superoxide dismutases, C-terminal domain SMA_RS03320 PF01709 Transcriptional regulator SMA_RS03325 PF02547 Queuosine biosynthesis protein SMA_RS03335 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase SMA_RS03340 PF01479 S4 domain SMA_RS03340 PF00849 RNA pseudouridylate synthase SMA_RS03350 PF08439 Oligopeptidase F SMA_RS03350 PF01432 Peptidase family M3 SMA_RS03360 PF13419 Haloacid dehalogenase-like hydrolase SMA_RS03365 PF01596 O-methyltransferase SMA_RS03370 PF13145 PPIC-type PPIASE domain SMA_RS03375 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain SMA_RS03375 PF01411 tRNA synthetases class II (A) SMA_RS03375 PF02272 DHHA1 domain SMA_RS03390 PF00795 Carbon-nitrogen hydrolase SMA_RS03395 PF00155 Aminotransferase class I and II SMA_RS03400 PF01118 Semialdehyde dehydrogenase, NAD binding domain SMA_RS03400 PF02774 Semialdehyde dehydrogenase, dimerisation domain SMA_RS03405 PF01960 ArgJ family SMA_RS03410 PF00696 Amino acid kinase family SMA_RS03415 PF00202 Aminotransferase class-III SMA_RS03425 PF06736 Protein of unknown function (DUF1211) SMA_RS03430 PF09515 Thiamine transporter protein (Thia_YuaJ) SMA_RS03435 PF00268 Ribonucleotide reductase, small chain SMA_RS03440 PF08343 Ribonucleotide reductase N-terminal SMA_RS03440 PF02867 Ribonucleotide reductase, barrel domain SMA_RS03440 PF00317 Ribonucleotide reductase, all-alpha domain SMA_RS03445 PF00462 Glutaredoxin SMA_RS03450 PF00694 Aconitase C-terminal domain SMA_RS03450 PF00330 Aconitase family (aconitate hydratase) SMA_RS03455 PF00285 Citrate synthase, C-terminal domain SMA_RS03460 PF00180 Isocitrate/isopropylmalate dehydrogenase SMA_RS03475 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family SMA_RS03475 PF00356 Bacterial regulatory proteins, lacI family SMA_RS03485 PF01042 Endoribonuclease L-PSP SMA_RS03495 PF00440 Bacterial regulatory proteins, tetR family SMA_RS03510 PF03668 P-loop ATPase protein family SMA_RS03515 PF01933 Uncharacterised protein family UPF0052 SMA_RS03520 PF02650 WhiA C-terminal HTH domain SMA_RS03520 PF14527 WhiA LAGLIDADG-like domain SMA_RS03520 PF10298 WhiA N-terminal LAGLIDADG-like domain SMA_RS03525 PF03577 Peptidase family C69 SMA_RS03540 PF01297 Zinc-uptake complex component A periplasmic SMA_RS03540 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment SMA_RS03565 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase SMA_RS03565 PF01476 LysM domain SMA_RS03575 PF01197 Ribosomal protein L31 SMA_RS03580 PF01368 DHH family SMA_RS03580 PF02272 DHHA1 domain SMA_RS03585 PF00381 PTS HPr component phosphorylation site SMA_RS03590 PF05524 PEP-utilising enzyme, N-terminal SMA_RS03590 PF00391 PEP-utilising enzyme, mobile domain SMA_RS03590 PF02896 PEP-utilising enzyme, TIM barrel domain SMA_RS03595 PF00171 Aldehyde dehydrogenase family SMA_RS03620 PF00271 Helicase conserved C-terminal domain SMA_RS03620 PF00270 DEAD/DEAH box helicase SMA_RS03625 PF00485 Phosphoribulokinase / Uridine kinase family SMA_RS03630 PF08502 LeuA allosteric (dimerisation) domain SMA_RS03630 PF00682 HMGL-like SMA_RS03635 PF00180 Isocitrate/isopropylmalate dehydrogenase SMA_RS03645 PF00330 Aconitase family (aconitate hydratase) SMA_RS03650 PF00694 Aconitase C-terminal domain SMA_RS03655 PF13185 GAF domain SMA_RS03660 PF12169 DNA polymerase III subunits gamma and tau domain III SMA_RS03670 PF13276 HTH-like domain SMA_RS03670 PF13333 Integrase core domain SMA_RS03670 PF00665 Integrase core domain SMA_RS03680 PF00438 S-adenosylmethionine synthetase, N-terminal domain SMA_RS03680 PF02772 S-adenosylmethionine synthetase, central domain SMA_RS03680 PF02773 S-adenosylmethionine synthetase, C-terminal domain SMA_RS03685 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) SMA_RS03695 PF00392 Bacterial regulatory proteins, gntR family SMA_RS03695 PF00571 CBS domain SMA_RS03695 PF07085 DRTGG domain SMA_RS03695 PF03061 Thioesterase superfamily SMA_RS03700 PF00557 Metallopeptidase family M24 SMA_RS03710 PF04138 GtrA-like protein SMA_RS03715 PF06177 QueT transporter SMA_RS03720 PF12826 Helix-hairpin-helix motif SMA_RS03720 PF01653 NAD-dependent DNA ligase adenylation domain SMA_RS03720 PF03120 NAD-dependent DNA ligase OB-fold domain SMA_RS03720 PF03119 NAD-dependent DNA ligase C4 zinc finger domain SMA_RS03720 PF00533 BRCA1 C Terminus (BRCT) domain SMA_RS03725 PF00781 Diacylglycerol kinase catalytic domain SMA_RS03735 PF01610 Transposase SMA_RS03735 PF13683 Integrase core domain SMA_RS03740 PF00343 Carbohydrate phosphorylase SMA_RS03745 PF00137 ATP synthase subunit C SMA_RS03750 PF00119 ATP synthase A chain SMA_RS03755 PF00430 ATP synthase B/B' CF(0) SMA_RS03760 PF00213 ATP synthase delta (OSCP) subunit SMA_RS03765 PF02874 ATP synthase alpha/beta family, beta-barrel domain SMA_RS03765 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SMA_RS03765 PF00306 ATP synthase alpha/beta chain, C terminal domain SMA_RS03770 PF00231 ATP synthase SMA_RS03775 PF02874 ATP synthase alpha/beta family, beta-barrel domain SMA_RS03775 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SMA_RS03780 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain SMA_RS03780 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain SMA_RS03790 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) SMA_RS03795 PF11772 DNA-directed RNA polymerase subunit beta SMA_RS03800 PF01223 DNA/RNA non-specific endonuclease SMA_RS03810 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain SMA_RS03810 PF01409 tRNA synthetases class II core domain (F) SMA_RS03815 PF00583 Acetyltransferase (GNAT) family SMA_RS03820 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain SMA_RS03820 PF01588 Putative tRNA binding domain SMA_RS03820 PF03147 Ferredoxin-fold anticodon binding domain SMA_RS03820 PF03484 tRNA synthetase B5 domain SMA_RS03820 PF03483 B3/4 domain SMA_RS03825 PF12705 PD-(D/E)XK nuclease superfamily SMA_RS03830 PF00580 UvrD/REP helicase N-terminal domain SMA_RS03830 PF12705 PD-(D/E)XK nuclease superfamily SMA_RS03830 PF13361 UvrD-like helicase C-terminal domain SMA_RS03850 PF01926 50S ribosome-binding GTPase SMA_RS03850 PF16360 GTP-binding GTPase Middle Region SMA_RS03850 PF13167 GTP-binding GTPase N-terminal SMA_RS03860 PF00753 Metallo-beta-lactamase superfamily SMA_RS03860 PF12706 Beta-lactamase superfamily domain SMA_RS03865 PF00106 short chain dehydrogenase SMA_RS03870 PF02272 DHHA1 domain SMA_RS03870 PF17768 RecJ OB domain SMA_RS03870 PF10141 Single-strand DNA-specific exonuclease, C terminal domain SMA_RS03870 PF01368 DHH family SMA_RS03900 PF00156 Phosphoribosyl transferase domain SMA_RS03905 PF04204 Homoserine O-succinyltransferase SMA_RS03915 PF10576 Iron-sulfur binding domain of endonuclease III SMA_RS03915 PF00730 HhH-GPD superfamily base excision DNA repair protein SMA_RS03915 PF00633 Helix-hairpin-helix motif SMA_RS03920 PF04816 tRNA (adenine(22)-N(1))-methyltransferase SMA_RS03925 PF01784 NIF3 (NGG1p interacting factor 3) SMA_RS03930 PF01266 FAD dependent oxidoreductase SMA_RS03935 PF00483 Nucleotidyl transferase SMA_RS03940 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase SMA_RS03945 PF16363 GDP-mannose 4,6 dehydratase SMA_RS03955 PF00293 NUDIX domain SMA_RS03960 PF01594 AI-2E family transporter SMA_RS03980 PF00724 NADH:flavin oxidoreductase / NADH oxidase family SMA_RS03985 PF00205 Thiamine pyrophosphate enzyme, central domain SMA_RS03985 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SMA_RS03985 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SMA_RS03990 PF03306 Alpha-acetolactate decarboxylase SMA_RS03995 PF13520 Amino acid permease SMA_RS04000 PF05670 NFACT protein RNA binding domain SMA_RS04005 PF03466 LysR substrate binding domain SMA_RS04005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SMA_RS04010 PF00005 ABC transporter SMA_RS04015 PF00528 Binding-protein-dependent transport system inner membrane component SMA_RS04020 PF01546 Peptidase family M20/M25/M40 SMA_RS04030 PF02653 Branched-chain amino acid transport system / permease component SMA_RS04035 PF00005 ABC transporter SMA_RS04035 PF08402 TOBE domain SMA_RS04050 PF17770 Ribonuclease J C-terminal domain SMA_RS04050 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain SMA_RS04050 PF00753 Metallo-beta-lactamase superfamily SMA_RS04060 PF16326 ABC transporter C-terminal domain SMA_RS04060 PF00005 ABC transporter SMA_RS04060 PF12848 ABC transporter SMA_RS04085 PF00676 Dehydrogenase E1 component SMA_RS04090 PF02779 Transketolase, pyrimidine binding domain SMA_RS04090 PF02780 Transketolase, C-terminal domain SMA_RS04090 PF00364 Biotin-requiring enzyme SMA_RS04095 PF02817 e3 binding domain SMA_RS04095 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) SMA_RS04095 PF00364 Biotin-requiring enzyme SMA_RS04100 PF07992 Pyridine nucleotide-disulphide oxidoreductase SMA_RS04100 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SMA_RS04125 PF10437 Bacterial lipoate protein ligase C-terminus SMA_RS04125 PF03099 Biotin/lipoate A/B protein ligase family SMA_RS04150 PF01661 Macro domain SMA_RS04155 PF02583 Metal-sensitive transcriptional repressor SMA_RS04165 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SMA_RS04165 PF07992 Pyridine nucleotide-disulphide oxidoreductase SMA_RS04175 PF01966 HD domain SMA_RS04190 PF00690 Cation transporter/ATPase, N-terminus SMA_RS04190 PF00689 Cation transporting ATPase, C-terminus SMA_RS04200 PF00248 Aldo/keto reductase family SMA_RS04225 PF13419 Haloacid dehalogenase-like hydrolase SMA_RS04235 PF03466 LysR substrate binding domain SMA_RS04235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SMA_RS04240 PF03601 Conserved hypothetical protein 698 SMA_RS04245 PF00171 Aldehyde dehydrogenase family SMA_RS04255 PF08459 UvrC Helix-hairpin-helix N-terminal SMA_RS04255 PF02151 UvrB/uvrC motif SMA_RS04255 PF01541 GIY-YIG catalytic domain SMA_RS04270 PF00881 Nitroreductase family SMA_RS04275 PF01546 Peptidase family M20/M25/M40 SMA_RS04285 PF03167 Uracil DNA glycosylase superfamily SMA_RS04290 PF02687 FtsX-like permease family SMA_RS04295 PF00005 ABC transporter SMA_RS04300 PF03167 Uracil DNA glycosylase superfamily SMA_RS04305 PF12631 MnmE helical domain SMA_RS04305 PF01926 50S ribosome-binding GTPase SMA_RS04305 PF10396 GTP-binding protein TrmE N-terminus SMA_RS04315 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) SMA_RS04320 PF01676 Metalloenzyme superfamily SMA_RS04325 PF01048 Phosphorylase superfamily SMA_RS04330 PF00117 Glutamine amidotransferase class-I SMA_RS04345 PF01048 Phosphorylase superfamily SMA_RS04355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SMA_RS04355 PF03466 LysR substrate binding domain SMA_RS04360 PF03816 Cell envelope-related transcriptional attenuator domain SMA_RS04370 PF02706 Chain length determinant protein SMA_RS04375 PF13614 AAA domain SMA_RS04380 PF02397 Bacterial sugar transferase SMA_RS04385 PF01943 Polysaccharide biosynthesis protein SMA_RS04390 PF03275 UDP-galactopyranose mutase SMA_RS04400 PF00534 Glycosyl transferases group 1 SMA_RS04400 PF13439 Glycosyltransferase Family 4 SMA_RS04405 PF17101 Stealth protein CR1, conserved region 1 SMA_RS04405 PF11380 Stealth protein CR2, conserved region 2 SMA_RS04405 PF17102 Stealth protein CR3, conserved region 3 SMA_RS04415 PF00534 Glycosyl transferases group 1 SMA_RS04415 PF13439 Glycosyltransferase Family 4 SMA_RS04435 PF00534 Glycosyl transferases group 1 SMA_RS04435 PF13439 Glycosyltransferase Family 4 SMA_RS04445 PF04321 RmlD substrate binding domain SMA_RS04455 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B SMA_RS04460 PF01180 Dihydroorotate dehydrogenase SMA_RS04465 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family SMA_RS04470 PF00719 Inorganic pyrophosphatase SMA_RS04475 PF00156 Phosphoribosyl transferase domain SMA_RS04480 PF01161 Phosphatidylethanolamine-binding protein SMA_RS04485 PF03167 Uracil DNA glycosylase superfamily SMA_RS04495 PF01979 Amidohydrolase family SMA_RS04500 PF02660 Glycerol-3-phosphate acyltransferase SMA_RS04505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMA_RS04505 PF00204 DNA gyrase B SMA_RS04505 PF01751 Toprim domain SMA_RS04505 PF00986 DNA gyrase B subunit, carboxyl terminus SMA_RS04510 PF03989 DNA gyrase C-terminal domain, beta-propeller SMA_RS04510 PF00521 DNA gyrase/topoisomerase IV, subunit A SMA_RS04515 PF01063 Amino-transferase class IV SMA_RS04535 PF00575 S1 RNA binding domain SMA_RS04545 PF04172 LrgB-like family SMA_RS04550 PF03788 LrgA family SMA_RS04565 PF00005 ABC transporter SMA_RS04570 PF00392 Bacterial regulatory proteins, gntR family SMA_RS04575 PF01336 OB-fold nucleic acid binding domain SMA_RS04575 PF02811 PHP domain SMA_RS04575 PF14579 Helix-hairpin-helix motif SMA_RS04575 PF17657 Bacterial DNA polymerase III alpha subunit finger domain SMA_RS04575 PF07733 Bacterial DNA polymerase III alpha NTPase domain SMA_RS04580 PF00365 Phosphofructokinase SMA_RS04585 PF02887 Pyruvate kinase, alpha/beta domain SMA_RS04585 PF00224 Pyruvate kinase, barrel domain SMA_RS04595 PF01380 SIS domain SMA_RS04610 PF01610 Transposase SMA_RS04610 PF13683 Integrase core domain SMA_RS04625 PF07155 ECF-type riboflavin transporter, S component SMA_RS04630 PF17773 UPF0176 acylphosphatase like domain SMA_RS04630 PF12368 Rhodanase C-terminal SMA_RS04630 PF00581 Rhodanese-like domain SMA_RS04635 PF12558 ATP-binding cassette cobalt transporter SMA_RS04635 PF00005 ABC transporter SMA_RS04645 PF00313 'Cold-shock' DNA-binding domain SMA_RS04650 PF01610 Transposase SMA_RS04650 PF13683 Integrase core domain SMA_RS04655 PF08279 HTH domain SMA_RS04655 PF05043 Mga helix-turn-helix domain SMA_RS04655 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SMA_RS04660 PF08274 PhnA Zinc-Ribbon SMA_RS04660 PF03831 PhnA domain SMA_RS04665 PF00528 Binding-protein-dependent transport system inner membrane component SMA_RS04670 PF00005 ABC transporter SMA_RS04680 PF01545 Cation efflux family SMA_RS04680 PF16916 Dimerisation domain of Zinc Transporter SMA_RS04685 PF13936 Helix-turn-helix domain SMA_RS04690 PF01235 Sodium:alanine symporter family SMA_RS04705 PF00300 Histidine phosphatase superfamily (branch 1) SMA_RS04715 PF01594 AI-2E family transporter SMA_RS04720 PF08437 Glycosyl transferase family 8 C-terminal SMA_RS04720 PF01501 Glycosyl transferase family 8 SMA_RS04725 PF04002 RadC-like JAB domain SMA_RS04730 PF06971 Putative DNA-binding protein N-terminus SMA_RS04730 PF02629 CoA binding domain SMA_RS04740 PF00266 Aminotransferase class-V SMA_RS04745 PF14572 Phosphoribosyl synthetase-associated domain SMA_RS04745 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase SMA_RS04755 PF04607 Region found in RelA / SpoT proteins SMA_RS04760 PF01513 ATP-NAD kinase SMA_RS04765 PF00849 RNA pseudouridylate synthase SMA_RS04770 PF01515 Phosphate acetyl/butaryl transferase SMA_RS04775 PF00106 short chain dehydrogenase SMA_RS04815 PF00478 IMP dehydrogenase / GMP reductase domain SMA_RS04820 PF13683 Integrase core domain SMA_RS04820 PF01610 Transposase SMA_RS04825 PF00156 Phosphoribosyl transferase domain SMA_RS04830 PF00860 Permease family SMA_RS04835 PF02424 ApbE family SMA_RS04840 PF01361 Tautomerase enzyme SMA_RS04850 PF00265 Thymidine kinase SMA_RS04855 PF03462 PCRF domain SMA_RS04855 PF00472 RF-1 domain SMA_RS04860 PF05175 Methyltransferase small domain SMA_RS04865 PF01300 Telomere recombination SMA_RS04870 PF00464 Serine hydroxymethyltransferase SMA_RS04885 PF00005 ABC transporter SMA_RS04885 PF00664 ABC transporter transmembrane region SMA_RS04890 PF00664 ABC transporter transmembrane region SMA_RS04890 PF00005 ABC transporter SMA_RS04895 PF09154 Domain of unknown function (DUF1939) SMA_RS04895 PF00128 Alpha amylase, catalytic domain SMA_RS04910 PF00117 Glutamine amidotransferase class-I SMA_RS04910 PF00958 GMP synthase C terminal domain SMA_RS04910 PF02540 NAD synthase SMA_RS04915 PF01555 DNA methylase SMA_RS04920 PF04851 Type III restriction enzyme, res subunit SMA_RS04930 PF13683 Integrase core domain SMA_RS04930 PF01610 Transposase SMA_RS04975 PF01554 MatE SMA_RS04980 PF02384 N-6 DNA Methylase SMA_RS04980 PF12161 HsdM N-terminal domain SMA_RS04990 PF12008 Type I restriction and modification enzyme - subunit R C terminal SMA_RS04990 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) SMA_RS04990 PF18766 SWI2/SNF2 ATPase SMA_RS04995 PF00589 Phage integrase family SMA_RS04995 PF02899 Phage integrase, N-terminal SAM-like domain SMA_RS05005 PF00392 Bacterial regulatory proteins, gntR family SMA_RS05005 PF07702 UTRA domain SMA_RS05020 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system SMA_RS05030 PF04297 Putative helix-turn-helix protein, YlxM / p13 like SMA_RS05035 PF00448 SRP54-type protein, GTPase domain SMA_RS05035 PF02978 Signal peptide binding domain SMA_RS05035 PF02881 SRP54-type protein, helical bundle domain SMA_RS05050 PF13495 Phage integrase, N-terminal SAM-like domain SMA_RS05050 PF00589 Phage integrase family SMA_RS05055 PF01381 Helix-turn-helix SMA_RS05055 PF06114 IrrE N-terminal-like domain SMA_RS05055 PF09856 Predicted transcriptional regulator (DUF2083) SMA_RS05060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMA_RS05065 PF00486 Transcriptional regulatory protein, C terminal SMA_RS05065 PF00072 Response regulator receiver domain SMA_RS05075 PF00005 ABC transporter SMA_RS05085 PF01134 Glucose inhibited division protein A SMA_RS05100 PF01396 Topoisomerase DNA binding C4 zinc finger SMA_RS05100 PF01131 DNA topoisomerase SMA_RS05100 PF01751 Toprim domain SMA_RS05105 PF02481 DNA recombination-mediator protein A SMA_RS05105 PF18255 DNA processing protein A sterile alpha motif domain SMA_RS05110 PF12464 Maltose acetyltransferase SMA_RS05110 PF14602 Hexapeptide repeat of succinyl-transferase SMA_RS05115 PF01351 Ribonuclease HII SMA_RS05120 PF01926 50S ribosome-binding GTPase SMA_RS05140 PF00005 ABC transporter SMA_RS05140 PF12848 ABC transporter SMA_RS05155 PF00392 Bacterial regulatory proteins, gntR family SMA_RS05155 PF00155 Aminotransferase class I and II SMA_RS05160 PF00701 Dihydrodipicolinate synthetase family SMA_RS05165 PF02774 Semialdehyde dehydrogenase, dimerisation domain SMA_RS05165 PF01118 Semialdehyde dehydrogenase, NAD binding domain SMA_RS05170 PF13091 PLD-like domain SMA_RS05175 PF01268 Formate--tetrahydrofolate ligase SMA_RS05185 PF02441 Flavoprotein SMA_RS05190 PF12822 ECF transporter, substrate-specific component SMA_RS05195 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I SMA_RS05195 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II SMA_RS05195 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III SMA_RS05195 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain SMA_RS05210 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SMA_RS05215 PF04203 Sortase domain SMA_RS05220 PF00521 DNA gyrase/topoisomerase IV, subunit A SMA_RS05220 PF03989 DNA gyrase C-terminal domain, beta-propeller SMA_RS05230 PF00056 lactate/malate dehydrogenase, NAD binding domain SMA_RS05230 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain SMA_RS05235 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SMA_RS05235 PF07992 Pyridine nucleotide-disulphide oxidoreductase SMA_RS05250 PF02653 Branched-chain amino acid transport system / permease component SMA_RS05255 PF02653 Branched-chain amino acid transport system / permease component SMA_RS05260 PF00005 ABC transporter SMA_RS05265 PF02608 ABC transporter substrate-binding protein PnrA-like SMA_RS05270 PF01791 DeoC/LacD family aldolase SMA_RS05275 PF05175 Methyltransferase small domain SMA_RS05280 PF00485 Phosphoribulokinase / Uridine kinase family SMA_RS05285 PF01649 Ribosomal protein S20 SMA_RS05290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMA_RS05290 PF00512 His Kinase A (phospho-acceptor) domain SMA_RS05295 PF00072 Response regulator receiver domain SMA_RS05295 PF00486 Transcriptional regulatory protein, C terminal SMA_RS05300 PF11838 ERAP1-like C-terminal domain SMA_RS05300 PF01433 Peptidase family M1 domain SMA_RS05305 PF01610 Transposase SMA_RS05305 PF13683 Integrase core domain SMA_RS05310 PF01895 PhoU domain SMA_RS05315 PF00005 ABC transporter SMA_RS05320 PF00005 ABC transporter SMA_RS05325 PF00528 Binding-protein-dependent transport system inner membrane component SMA_RS05330 PF00528 Binding-protein-dependent transport system inner membrane component SMA_RS05335 PF12849 PBP superfamily domain SMA_RS05340 PF01189 16S rRNA methyltransferase RsmB/F SMA_RS05340 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF SMA_RS05340 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF SMA_RS05350 PF07992 Pyridine nucleotide-disulphide oxidoreductase SMA_RS05350 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SMA_RS05370 PF13673 Acetyltransferase (GNAT) domain SMA_RS05370 PF13302 Acetyltransferase (GNAT) domain SMA_RS05370 PF03352 Methyladenine glycosylase SMA_RS05370 PF00117 Glutamine amidotransferase class-I SMA_RS05370 PF00958 GMP synthase C terminal domain SMA_RS05375 PF00459 Inositol monophosphatase family SMA_RS05380 PF05256 Uncharacterised protein family (UPF0223) SMA_RS05385 PF03960 ArsC family SMA_RS05390 PF01687 Riboflavin kinase SMA_RS05390 PF06574 FAD synthetase SMA_RS05395 PF01509 TruB family pseudouridylate synthase (N terminal domain) SMA_RS05395 PF16198 tRNA pseudouridylate synthase B C-terminal domain SMA_RS05435 PF01610 Transposase SMA_RS05435 PF13683 Integrase core domain SMA_RS05440 PF08534 Redoxin SMA_RS05450 PF01053 Cys/Met metabolism PLP-dependent enzyme SMA_RS05465 PF00580 UvrD/REP helicase N-terminal domain SMA_RS05465 PF13361 UvrD-like helicase C-terminal domain SMA_RS05475 PF01680 SOR/SNZ family SMA_RS05480 PF00392 Bacterial regulatory proteins, gntR family SMA_RS05480 PF00155 Aminotransferase class I and II SMA_RS05485 PF01235 Sodium:alanine symporter family SMA_RS05515 PF14602 Hexapeptide repeat of succinyl-transferase SMA_RS05515 PF12464 Maltose acetyltransferase SMA_RS05535 PF03109 ABC1 family SMA_RS05545 PF12833 Helix-turn-helix domain SMA_RS05545 PF00072 Response regulator receiver domain SMA_RS05550 PF13333 Integrase core domain SMA_RS05550 PF13276 HTH-like domain SMA_RS05550 PF00665 Integrase core domain SMA_RS05560 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 SMA_RS05560 PF00367 phosphotransferase system, EIIB SMA_RS05560 PF02378 Phosphotransferase system, EIIC SMA_RS05565 PF00654 Voltage gated chloride channel SMA_RS05570 PF13416 Bacterial extracellular solute-binding protein SMA_RS05575 PF00528 Binding-protein-dependent transport system inner membrane component SMA_RS05580 PF00528 Binding-protein-dependent transport system inner membrane component SMA_RS05585 PF08402 TOBE domain SMA_RS05585 PF00005 ABC transporter SMA_RS05590 PF01565 FAD binding domain SMA_RS05590 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain SMA_RS05595 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) SMA_RS05600 PF02152 Dihydroneopterin aldolase SMA_RS05605 PF00809 Pterin binding enzyme SMA_RS05610 PF01227 GTP cyclohydrolase I SMA_RS05615 PF02875 Mur ligase family, glutamate ligase domain SMA_RS05615 PF08245 Mur ligase middle domain SMA_RS05620 PF00497 Bacterial extracellular solute-binding proteins, family 3 SMA_RS05625 PF00005 ABC transporter SMA_RS05630 PF00528 Binding-protein-dependent transport system inner membrane component SMA_RS05635 PF00528 Binding-protein-dependent transport system inner membrane component SMA_RS05645 PF00892 EamA-like transporter family SMA_RS05650 PF00288 GHMP kinases N terminal domain SMA_RS05650 PF08544 GHMP kinases C terminal SMA_RS05655 PF00742 Homoserine dehydrogenase SMA_RS05655 PF03447 Homoserine dehydrogenase, NAD binding domain SMA_RS05660 PF01522 Polysaccharide deacetylase SMA_RS05680 PF13495 Phage integrase, N-terminal SAM-like domain SMA_RS05680 PF00589 Phage integrase family SMA_RS05695 PF01263 Aldose 1-epimerase SMA_RS05700 PF00232 Glycosyl hydrolase family 1 SMA_RS05705 PF02378 Phosphotransferase system, EIIC SMA_RS05705 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SMA_RS05710 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit SMA_RS05715 PF01791 DeoC/LacD family aldolase SMA_RS05720 PF00294 pfkB family carbohydrate kinase SMA_RS05725 PF02502 Ribose/Galactose Isomerase SMA_RS05730 PF02502 Ribose/Galactose Isomerase SMA_RS05735 PF00480 ROK family SMA_RS05740 PF08220 DeoR-like helix-turn-helix domain SMA_RS05740 PF00455 DeoR C terminal sensor domain SMA_RS05755 PF00589 Phage integrase family SMA_RS05755 PF13495 Phage integrase, N-terminal SAM-like domain SMA_RS05775 PF16320 Ribosomal protein L7/L12 dimerisation domain SMA_RS05775 PF00542 Ribosomal protein L7/L12 C-terminal domain SMA_RS05780 PF00466 Ribosomal protein L10 SMA_RS05785 PF10431 C-terminal, D2-small domain, of ClpB protein SMA_RS05785 PF00004 ATPase family associated with various cellular activities (AAA) SMA_RS05785 PF17871 AAA lid domain SMA_RS05785 PF07724 AAA domain (Cdc48 subfamily) SMA_RS05800 PF02574 Homocysteine S-methyltransferase SMA_RS05805 PF00324 Amino acid permease SMA_RS05810 PF01926 50S ribosome-binding GTPase SMA_RS05815 PF10431 C-terminal, D2-small domain, of ClpB protein SMA_RS05815 PF06689 ClpX C4-type zinc finger SMA_RS05815 PF07724 AAA domain (Cdc48 subfamily) SMA_RS05825 PF00186 Dihydrofolate reductase SMA_RS05830 PF00303 Thymidylate synthase SMA_RS05835 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal SMA_RS05835 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal SMA_RS05840 PF00368 Hydroxymethylglutaryl-coenzyme A reductase SMA_RS05850 PF03006 Haemolysin-III related SMA_RS05855 PF01070 FMN-dependent dehydrogenase SMA_RS05860 PF00288 GHMP kinases N terminal domain SMA_RS05860 PF08544 GHMP kinases C terminal SMA_RS05870 PF00288 GHMP kinases N terminal domain SMA_RS05870 PF08544 GHMP kinases C terminal SMA_RS05870 PF10509 Galactokinase galactose-binding signature SMA_RS05875 PF13409 Glutathione S-transferase, N-terminal domain SMA_RS05880 PF00497 Bacterial extracellular solute-binding proteins, family 3 SMA_RS05885 PF00005 ABC transporter SMA_RS05890 PF00528 Binding-protein-dependent transport system inner membrane component SMA_RS05895 PF00528 Binding-protein-dependent transport system inner membrane component SMA_RS05900 PF00497 Bacterial extracellular solute-binding proteins, family 3 SMA_RS05910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SMA_RS05910 PF03466 LysR substrate binding domain SMA_RS05915 PF00248 Aldo/keto reductase family SMA_RS05920 PF04851 Type III restriction enzyme, res subunit SMA_RS05920 PF08774 VRR-NUC domain SMA_RS05935 PF12161 HsdM N-terminal domain SMA_RS05935 PF02384 N-6 DNA Methylase SMA_RS05945 PF12008 Type I restriction and modification enzyme - subunit R C terminal SMA_RS05945 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) SMA_RS05945 PF18766 SWI2/SNF2 ATPase SMA_RS05960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMA_RS05960 PF00512 His Kinase A (phospho-acceptor) domain SMA_RS05965 PF00486 Transcriptional regulatory protein, C terminal SMA_RS05965 PF00072 Response regulator receiver domain SMA_RS05970 PF04607 Region found in RelA / SpoT proteins SMA_RS05975 PF00528 Binding-protein-dependent transport system inner membrane component SMA_RS05980 PF00571 CBS domain SMA_RS05980 PF00005 ABC transporter SMA_RS05985 PF04069 Substrate binding domain of ABC-type glycine betaine transport system SMA_RS05990 PF00528 Binding-protein-dependent transport system inner membrane component SMA_RS06005 PF00005 ABC transporter SMA_RS06005 PF00664 ABC transporter transmembrane region SMA_RS06010 PF00664 ABC transporter transmembrane region SMA_RS06010 PF00005 ABC transporter SMA_RS06020 PF01327 Polypeptide deformylase SMA_RS06030 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase SMA_RS06030 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain SMA_RS06040 PF14489 QueF-like protein SMA_RS06045 PF04055 Radical SAM superfamily SMA_RS06050 PF01242 6-pyruvoyl tetrahydropterin synthase SMA_RS06055 PF06508 Queuosine biosynthesis protein QueC SMA_RS06060 PF00005 ABC transporter SMA_RS06060 PF00664 ABC transporter transmembrane region SMA_RS06065 PF00005 ABC transporter SMA_RS06065 PF00664 ABC transporter transmembrane region SMA_RS06070 PF00005 ABC transporter SMA_RS06070 PF16326 ABC transporter C-terminal domain SMA_RS06070 PF12848 ABC transporter SMA_RS06075 PF13735 tRNA nucleotidyltransferase domain 2 putative SMA_RS06075 PF01743 Poly A polymerase head domain SMA_RS06075 PF12627 Probable RNA and SrmB- binding site of polymerase A SMA_RS06080 PF01113 Dihydrodipicolinate reductase, N-terminus SMA_RS06080 PF05173 Dihydrodipicolinate reductase, C-terminus SMA_RS06085 PF02645 Uncharacterised protein, DegV family COG1307 SMA_RS06095 PF05257 CHAP domain SMA_RS06095 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase SMA_RS06105 PF02219 Methylenetetrahydrofolate reductase SMA_RS06105 PF02574 Homocysteine S-methyltransferase SMA_RS06110 PF08267 Cobalamin-independent synthase, N-terminal domain SMA_RS06110 PF01717 Cobalamin-independent synthase, Catalytic domain SMA_RS06115 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SMA_RS06115 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SMA_RS06120 PF00294 pfkB family carbohydrate kinase SMA_RS06125 PF08220 DeoR-like helix-turn-helix domain SMA_RS06125 PF00455 DeoR C terminal sensor domain SMA_RS06130 PF07992 Pyridine nucleotide-disulphide oxidoreductase SMA_RS06135 PF04229 GrpB protein SMA_RS06140 PF01746 tRNA (Guanine-1)-methyltransferase SMA_RS06145 PF05239 PRC-barrel domain SMA_RS06145 PF01782 RimM N-terminal domain SMA_RS06160 PF00689 Cation transporting ATPase, C-terminus SMA_RS06160 PF00690 Cation transporter/ATPase, N-terminus SMA_RS06170 PF00886 Ribosomal protein S16 SMA_RS06195 PF02687 FtsX-like permease family SMA_RS06195 PF12704 MacB-like periplasmic core domain SMA_RS06200 PF00005 ABC transporter SMA_RS06210 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain SMA_RS06210 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain SMA_RS06210 PF02142 MGS-like domain SMA_RS06215 PF00117 Glutamine amidotransferase class-I SMA_RS06215 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain SMA_RS06220 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain SMA_RS06220 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain SMA_RS06225 PF00860 Permease family SMA_RS06230 PF00156 Phosphoribosyl transferase domain SMA_RS06235 PF01479 S4 domain SMA_RS06235 PF00849 RNA pseudouridylate synthase SMA_RS06240 PF01252 Signal peptidase (SPase) II SMA_RS06245 PF03466 LysR substrate binding domain SMA_RS06245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SMA_RS06250 PF01016 Ribosomal L27 protein SMA_RS06260 PF00829 Ribosomal prokaryotic L21 protein SMA_RS06270 PF09587 Bacterial capsule synthesis protein PGA_cap SMA_RS06275 PF02568 Thiamine biosynthesis protein (ThiI) SMA_RS06275 PF02926 THUMP domain SMA_RS06280 PF00266 Aminotransferase class-V SMA_RS06290 PF02875 Mur ligase family, glutamate ligase domain SMA_RS06290 PF08245 Mur ligase middle domain SMA_RS06295 PF00056 lactate/malate dehydrogenase, NAD binding domain SMA_RS06295 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain SMA_RS06300 PF06133 Control of competence regulator ComK, YlbF/YmcA SMA_RS06305 PF02153 Prephenate dehydrogenase SMA_RS06310 PF01264 Chorismate synthase SMA_RS06315 PF01761 3-dehydroquinate synthase SMA_RS06320 PF18317 Shikimate 5'-dehydrogenase C-terminal domain SMA_RS06320 PF08501 Shikimate dehydrogenase substrate binding domain SMA_RS06325 PF01487 Type I 3-dehydroquinase SMA_RS06330 PF17785 PUA-like domain SMA_RS06330 PF10672 S-adenosylmethionine-dependent methyltransferase SMA_RS06345 PF00884 Sulfatase SMA_RS06350 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) SMA_RS06355 PF00453 Ribosomal protein L20 SMA_RS06360 PF01632 Ribosomal protein L35 SMA_RS06365 PF05198 Translation initiation factor IF-3, N-terminal domain SMA_RS06365 PF00707 Translation initiation factor IF-3, C-terminal domain SMA_RS06370 PF02224 Cytidylate kinase SMA_RS06385 PF07687 Peptidase dimerisation domain SMA_RS06385 PF01546 Peptidase family M20/M25/M40 SMA_RS06400 PF01476 LysM domain SMA_RS06400 PF05257 CHAP domain SMA_RS06405 PF00535 Glycosyl transferase family 2 SMA_RS06420 PF00884 Sulfatase SMA_RS06425 PF01501 Glycosyl transferase family 8 SMA_RS06425 PF00535 Glycosyl transferase family 2 SMA_RS06430 PF00535 Glycosyl transferase family 2 SMA_RS06450 PF00535 Glycosyl transferase family 2 SMA_RS06465 PF00535 Glycosyl transferase family 2 SMA_RS06470 PF00005 ABC transporter SMA_RS06480 PF00535 Glycosyl transferase family 2 SMA_RS06480 PF01501 Glycosyl transferase family 8 SMA_RS06490 PF04321 RmlD substrate binding domain SMA_RS06495 PF01883 Iron-sulfur cluster assembly protein SMA_RS06500 PF03979 Sigma-70 factor, region 1.1 SMA_RS06500 PF00140 Sigma-70 factor, region 1.2 SMA_RS06500 PF04542 Sigma-70 region 2 SMA_RS06500 PF04545 Sigma-70, region 4 SMA_RS06500 PF04539 Sigma-70 region 3 SMA_RS06505 PF01807 CHC2 zinc finger SMA_RS06505 PF08275 DNA primase catalytic core, N-terminal domain SMA_RS06505 PF10410 DnaB-helicase binding domain of primase SMA_RS06510 PF01741 Large-conductance mechanosensitive channel, MscL SMA_RS06515 PF01165 Ribosomal protein S21 SMA_RS06525 PF13276 HTH-like domain SMA_RS06525 PF00665 Integrase core domain SMA_RS06525 PF13333 Integrase core domain SMA_RS06530 PF00497 Bacterial extracellular solute-binding proteins, family 3 SMA_RS06535 PF00155 Aminotransferase class I and II SMA_RS06540 PF00497 Bacterial extracellular solute-binding proteins, family 3 SMA_RS06545 PF00497 Bacterial extracellular solute-binding proteins, family 3 SMA_RS06550 PF00343 Carbohydrate phosphorylase SMA_RS06555 PF02446 4-alpha-glucanotransferase SMA_RS06560 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family SMA_RS06560 PF00356 Bacterial regulatory proteins, lacI family SMA_RS06570 PF00528 Binding-protein-dependent transport system inner membrane component SMA_RS06575 PF00528 Binding-protein-dependent transport system inner membrane component SMA_RS06580 PF00293 NUDIX domain SMA_RS06580 PF09297 NADH pyrophosphatase zinc ribbon domain SMA_RS06580 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain SMA_RS06585 PF04851 Type III restriction enzyme, res subunit SMA_RS06585 PF00271 Helicase conserved C-terminal domain SMA_RS06585 PF12344 Ultra-violet resistance protein B SMA_RS06585 PF02151 UvrB/uvrC motif SMA_RS06585 PF17757 UvrB interaction domain SMA_RS06590 PF00528 Binding-protein-dependent transport system inner membrane component SMA_RS06595 PF00005 ABC transporter SMA_RS06610 PF01926 50S ribosome-binding GTPase SMA_RS06610 PF09269 Domain of unknown function (DUF1967) SMA_RS06610 PF01018 GTP1/OBG SMA_RS06615 PF00849 RNA pseudouridylate synthase SMA_RS06615 PF01479 S4 domain SMA_RS06620 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SMA_RS06635 PF13333 Integrase core domain SMA_RS06635 PF13276 HTH-like domain SMA_RS06635 PF00665 Integrase core domain SMA_RS06655 PF00781 Diacylglycerol kinase catalytic domain SMA_RS06675 PF00005 ABC transporter SMA_RS06680 PF03649 Uncharacterised protein family (UPF0014) SMA_RS06685 PF04069 Substrate binding domain of ABC-type glycine betaine transport system SMA_RS06690 PF13333 Integrase core domain SMA_RS06690 PF00665 Integrase core domain SMA_RS06690 PF13276 HTH-like domain SMA_RS06725 PF00239 Resolvase, N terminal domain SMA_RS06725 PF02796 Helix-turn-helix domain of resolvase SMA_RS06730 PF01381 Helix-turn-helix SMA_RS06745 PF00005 ABC transporter SMA_RS06750 PF03412 Peptidase C39 family SMA_RS06750 PF00005 ABC transporter SMA_RS06750 PF00664 ABC transporter transmembrane region SMA_RS06755 PF13575 Domain of unknown function (DUF4135) SMA_RS06755 PF05147 Lanthionine synthetase C-like protein SMA_RS06760 PF04604 Type-A lantibiotic SMA_RS06765 PF04604 Type-A lantibiotic SMA_RS06770 PF00872 Transposase, Mutator family SMA_RS06775 PF00072 Response regulator receiver domain SMA_RS06775 PF00486 Transcriptional regulatory protein, C terminal SMA_RS06780 PF00512 His Kinase A (phospho-acceptor) domain SMA_RS06780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMA_RS06785 PF03432 Relaxase/Mobilisation nuclease domain SMA_RS06800 PF08239 Bacterial SH3 domain SMA_RS06800 PF00069 Protein kinase domain SMA_RS06810 PF11798 IMS family HHH motif SMA_RS06810 PF11799 impB/mucB/samB family C-terminal domain SMA_RS06810 PF00817 impB/mucB/samB family SMA_RS06860 PF00072 Response regulator receiver domain SMA_RS06860 PF00196 Bacterial regulatory proteins, luxR family SMA_RS06880 PF00005 ABC transporter SMA_RS06885 PF00005 ABC transporter SMA_RS06885 PF03412 Peptidase C39 family SMA_RS06885 PF00664 ABC transporter transmembrane region SMA_RS06900 PF04604 Type-A lantibiotic SMA_RS06930 PF18652 Adhesin P1 N-terminal domain SMA_RS06930 PF17998 Cell surface antigen I/II C2 terminal domain SMA_RS06930 PF16364 Cell surface antigen C-terminus SMA_RS06930 PF06696 Streptococcal surface antigen repeat SMA_RS06930 PF08363 Glucan-binding protein C SMA_RS07005 PF00145 C-5 cytosine-specific DNA methylase SMA_RS07015 PF01938 TRAM domain SMA_RS07015 PF05958 tRNA (Uracil-5-)-methyltransferase SMA_RS07020 PF03816 Cell envelope-related transcriptional attenuator domain SMA_RS07025 PF00800 Prephenate dehydratase SMA_RS07030 PF01202 Shikimate kinase SMA_RS07035 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) SMA_RS07040 PF00679 Elongation factor G C-terminus SMA_RS07040 PF00009 Elongation factor Tu GTP binding domain SMA_RS07040 PF03144 Elongation factor Tu domain 2 SMA_RS07040 PF06421 GTP-binding protein LepA C-terminus SMA_RS07050 PF09827 CRISPR associated protein Cas2 SMA_RS07055 PF01867 CRISPR associated protein Cas1 SMA_RS07060 PF13395 HNH endonuclease SMA_RS07060 PF18470 Cas9 alpha-helical lobe domain SMA_RS07060 PF18541 RuvC endonuclease subdomain 3 SMA_RS07060 PF18070 CRISPR-Cas9 PI domain SMA_RS07060 PF18061 CRISPR-Cas9 WED domain SMA_RS07065 PF00334 Nucleoside diphosphate kinase SMA_RS07080 PF13344 Haloacid dehalogenase-like hydrolase SMA_RS07095 PF04055 Radical SAM superfamily SMA_RS07095 PF06969 HemN C-terminal domain SMA_RS07105 PF00665 Integrase core domain SMA_RS07105 PF13276 HTH-like domain SMA_RS07105 PF13333 Integrase core domain SMA_RS07110 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I SMA_RS07110 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain SMA_RS07110 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III SMA_RS07110 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II SMA_RS07120 PF02457 DisA bacterial checkpoint controller nucleotide-binding SMA_RS07125 PF08245 Mur ligase middle domain SMA_RS07125 PF08353 Domain of unknown function (DUF1727) SMA_RS07130 PF07685 CobB/CobQ-like glutamine amidotransferase domain SMA_RS07135 PF01610 Transposase SMA_RS07135 PF13683 Integrase core domain SMA_RS07140 PF03952 Enolase, N-terminal domain SMA_RS07140 PF00113 Enolase, C-terminal TIM barrel domain SMA_RS07150 PF02595 Glycerate kinase family SMA_RS07160 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) SMA_RS07160 PF17999 Pullulanase N1-terminal domain SMA_RS07160 PF00128 Alpha amylase, catalytic domain SMA_RS07170 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase SMA_RS07175 PF01502 Phosphoribosyl-AMP cyclohydrolase SMA_RS07180 PF00977 Histidine biosynthesis protein SMA_RS07185 PF00977 Histidine biosynthesis protein SMA_RS07190 PF00117 Glutamine amidotransferase class-I SMA_RS07195 PF00475 Imidazoleglycerol-phosphate dehydratase SMA_RS07205 PF00815 Histidinol dehydrogenase SMA_RS07210 PF01634 ATP phosphoribosyltransferase SMA_RS07215 PF13393 Histidyl-tRNA synthetase SMA_RS07220 PF00155 Aminotransferase class I and II SMA_RS07230 PF06160 Septation ring formation regulator, EzrA SMA_RS07235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMA_RS07235 PF01751 Toprim domain SMA_RS07235 PF00204 DNA gyrase B SMA_RS07235 PF00986 DNA gyrase B subunit, carboxyl terminus SMA_RS07245 PF01098 Cell cycle protein SMA_RS07255 PF01245 Ribosomal protein L19 SMA_RS07260 PF00654 Voltage gated chloride channel SMA_RS07265 PF02153 Prephenate dehydrogenase SMA_RS07265 PF01817 Chorismate mutase type II SMA_RS07280 PF00258 Flavodoxin SMA_RS07285 PF00962 Adenosine/AMP deaminase SMA_RS07290 PF00152 tRNA synthetases class II (D, K and N) SMA_RS07290 PF01336 OB-fold nucleic acid binding domain SMA_RS07300 PF00155 Aminotransferase class I and II SMA_RS07310 PF00929 Exonuclease SMA_RS07310 PF13307 Helicase C-terminal domain SMA_RS07310 PF04851 Type III restriction enzyme, res subunit SMA_RS07335 PF00753 Metallo-beta-lactamase superfamily SMA_RS07345 PF02687 FtsX-like permease family SMA_RS07345 PF18075 FtsX extracellular domain SMA_RS07350 PF00005 ABC transporter SMA_RS07355 PF03462 PCRF domain SMA_RS07355 PF00472 RF-1 domain SMA_RS07370 PF00690 Cation transporter/ATPase, N-terminus SMA_RS07370 PF00689 Cation transporting ATPase, C-terminus SMA_RS07385 PF01966 HD domain SMA_RS07395 PF02388 FemAB family SMA_RS07410 PF00121 Triosephosphate isomerase SMA_RS07415 PF00009 Elongation factor Tu GTP binding domain SMA_RS07415 PF03144 Elongation factor Tu domain 2 SMA_RS07415 PF03143 Elongation factor Tu C-terminal domain SMA_RS07420 PF13936 Helix-turn-helix domain SMA_RS07430 PF04539 Sigma-70 region 3 SMA_RS07430 PF04542 Sigma-70 region 2 SMA_RS07430 PF04545 Sigma-70, region 4 SMA_RS07435 PF01098 Cell cycle protein SMA_RS07440 PF00311 Phosphoenolpyruvate carboxylase SMA_RS07445 PF08439 Oligopeptidase F SMA_RS07445 PF01432 Peptidase family M3 SMA_RS07450 PF00255 Glutathione peroxidase SMA_RS07460 PF13457 GW (Gly-Tryp) dipeptide domain SMA_RS07460 PF01510 N-acetylmuramoyl-L-alanine amidase SMA_RS07470 PF00300 Histidine phosphatase superfamily (branch 1) SMA_RS07485 PF00152 tRNA synthetases class II (D, K and N) SMA_RS07485 PF01336 OB-fold nucleic acid binding domain SMA_RS07505 PF02632 BioY family SMA_RS07510 PF02229 Transcriptional Coactivator p15 (PC4) SMA_RS07525 PF16325 Peptidase family U32 C-terminal domain SMA_RS07525 PF01136 Peptidase family U32 SMA_RS07540 PF12732 YtxH-like protein SMA_RS07550 PF01790 Prolipoprotein diacylglyceryl transferase SMA_RS07555 PF02603 HPr Serine kinase N terminus SMA_RS07555 PF07475 HPr Serine kinase C-terminal domain SMA_RS07565 PF10263 SprT-like family SMA_RS07565 PF17283 SprT-like zinc ribbon domain SMA_RS07570 PF16921 Tex protein YqgF-like domain SMA_RS07570 PF09371 Tex-like protein N-terminal domain SMA_RS07570 PF17674 HHH domain SMA_RS07570 PF00575 S1 RNA binding domain SMA_RS07580 PF03773 Predicted permease SMA_RS07585 PF09323 Domain of unknown function (DUF1980) SMA_RS07600 PF02881 SRP54-type protein, helical bundle domain SMA_RS07600 PF00448 SRP54-type protein, GTPase domain SMA_RS07620 PF00293 NUDIX domain SMA_RS07625 PF02463 RecF/RecN/SMC N terminal domain SMA_RS07625 PF06470 SMC proteins Flexible Hinge Domain SMA_RS07630 PF14622 Ribonuclease-III-like SMA_RS07630 PF00035 Double-stranded RNA binding motif SMA_RS07635 PF00753 Metallo-beta-lactamase superfamily SMA_RS07640 PF00512 His Kinase A (phospho-acceptor) domain SMA_RS07640 PF00672 HAMP domain SMA_RS07640 PF13426 PAS domain SMA_RS07640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMA_RS07645 PF00486 Transcriptional regulatory protein, C terminal SMA_RS07645 PF00072 Response regulator receiver domain SMA_RS07650 PF00005 ABC transporter SMA_RS07655 PF00497 Bacterial extracellular solute-binding proteins, family 3 SMA_RS07660 PF00528 Binding-protein-dependent transport system inner membrane component SMA_RS07665 PF00528 Binding-protein-dependent transport system inner membrane component SMA_RS07680 PF03413 Peptidase propeptide and YPEB domain SMA_RS07685 PF00989 PAS fold SMA_RS07685 PF00672 HAMP domain SMA_RS07685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMA_RS07685 PF00512 His Kinase A (phospho-acceptor) domain SMA_RS07690 PF01610 Transposase SMA_RS07690 PF13683 Integrase core domain SMA_RS07700 PF00072 Response regulator receiver domain SMA_RS07700 PF00486 Transcriptional regulatory protein, C terminal SMA_RS07715 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SMA_RS07715 PF02824 TGS domain SMA_RS07715 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain SMA_RS07715 PF03129 Anticodon binding domain SMA_RS07720 PF13439 Glycosyltransferase Family 4 SMA_RS07720 PF00534 Glycosyl transferases group 1 SMA_RS07725 PF13439 Glycosyltransferase Family 4 SMA_RS07725 PF00534 Glycosyl transferases group 1 SMA_RS07730 PF00356 Bacterial regulatory proteins, lacI family SMA_RS07735 PF01321 Creatinase/Prolidase N-terminal domain SMA_RS07735 PF00557 Metallopeptidase family M24 SMA_RS07740 PF00893 Small Multidrug Resistance protein SMA_RS07755 PF00881 Nitroreductase family SMA_RS07775 PF13683 Integrase core domain SMA_RS07775 PF01610 Transposase SMA_RS07780 PF01668 SmpB protein SMA_RS07785 PF17876 Cold shock domain SMA_RS07785 PF00773 RNB domain SMA_RS07785 PF08206 Ribonuclease B OB domain SMA_RS07785 PF00575 S1 RNA binding domain SMA_RS07800 PF01121 Dephospho-CoA kinase SMA_RS07805 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain SMA_RS07805 PF06827 Zinc finger found in FPG and IleRS SMA_RS07805 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain SMA_RS07810 PF01926 50S ribosome-binding GTPase SMA_RS07810 PF07650 KH domain SMA_RS07815 PF01219 Prokaryotic diacylglycerol kinase SMA_RS07820 PF02130 Uncharacterized protein family UPF0054 SMA_RS07835 PF02562 PhoH-like protein SMA_RS07845 PF06855 YozE SAM-like fold SMA_RS07850 PF01625 Peptide methionine sulfoxide reductase SMA_RS07855 PF13509 S1 domain SMA_RS07855 PF17783 CvfB-like winged helix domain SMA_RS07860 PF01765 Ribosome recycling factor SMA_RS07865 PF00696 Amino acid kinase family SMA_RS07870 PF00687 Ribosomal protein L1p/L10e family SMA_RS07875 PF00298 Ribosomal protein L11, RNA binding domain SMA_RS07875 PF03946 Ribosomal protein L11, N-terminal domain SMA_RS07885 PF17854 FtsK alpha domain SMA_RS07885 PF09397 Ftsk gamma domain SMA_RS07885 PF01580 FtsK/SpoIIIE family SMA_RS07890 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD SMA_RS07900 PF01048 Phosphorylase superfamily SMA_RS07910 PF00293 NUDIX domain SMA_RS07915 PF14602 Hexapeptide repeat of succinyl-transferase SMA_RS07915 PF12804 MobA-like NTP transferase domain SMA_RS07915 PF00132 Bacterial transferase hexapeptide (six repeats) SMA_RS07920 PF01408 Oxidoreductase family, NAD-binding Rossmann fold SMA_RS07920 PF02894 Oxidoreductase family, C-terminal alpha/beta domain SMA_RS07950 PF03551 Transcriptional regulator PadR-like family SMA_RS07960 PF01588 Putative tRNA binding domain SMA_RS07960 PF09334 tRNA synthetases class I (M) SMA_RS07980 PF01022 Bacterial regulatory protein, arsR family SMA_RS07985 PF03372 Endonuclease/Exonuclease/phosphatase family SMA_RS08000 PF03960 ArsC family SMA_RS08005 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain SMA_RS08005 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain SMA_RS08015 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain SMA_RS08015 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SMA_RS08025 PF00266 Aminotransferase class-V SMA_RS08030 PF03932 CutC family SMA_RS08035 PF00543 Nitrogen regulatory protein P-II SMA_RS08040 PF00909 Ammonium Transporter Family SMA_RS08045 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases SMA_RS08050 PF06156 Initiation control protein YabA SMA_RS08055 PF04468 PSP1 C-terminal conserved region SMA_RS08060 PF09115 DNA polymerase III, delta subunit, C terminal SMA_RS08065 PF02223 Thymidylate kinase SMA_RS08070 PF00571 CBS domain SMA_RS08070 PF02833 DHHA2 domain SMA_RS08070 PF07085 DRTGG domain SMA_RS08070 PF01368 DHH family SMA_RS08075 PF00005 ABC transporter SMA_RS08080 PF12399 Branched-chain amino acid ATP-binding cassette transporter SMA_RS08080 PF00005 ABC transporter SMA_RS08085 PF02653 Branched-chain amino acid transport system / permease component SMA_RS08085 PF11862 Domain of unknown function (DUF3382) SMA_RS08090 PF02653 Branched-chain amino acid transport system / permease component SMA_RS08095 PF13458 Periplasmic binding protein SMA_RS08100 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) SMA_RS08110 PF00574 Clp protease SMA_RS08120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SMA_RS08120 PF03466 LysR substrate binding domain SMA_RS08130 PF00155 Aminotransferase class I and II SMA_RS08135 PF01053 Cys/Met metabolism PLP-dependent enzyme SMA_RS08140 PF01943 Polysaccharide biosynthesis protein SMA_RS08140 PF14667 Polysaccharide biosynthesis C-terminal domain SMA_RS08145 PF02875 Mur ligase family, glutamate ligase domain SMA_RS08145 PF08245 Mur ligase middle domain SMA_RS08150 PF00005 ABC transporter SMA_RS08155 PF01497 Periplasmic binding protein SMA_RS08160 PF01032 FecCD transport family SMA_RS08165 PF01032 FecCD transport family SMA_RS08180 PF03883 Peroxide stress protein YaaA SMA_RS08195 PF01368 DHH family SMA_RS08195 PF02833 DHHA2 domain SMA_RS08205 PF04055 Radical SAM superfamily SMA_RS08210 PF00571 CBS domain SMA_RS08210 PF03471 Transporter associated domain SMA_RS08210 PF01595 Cyclin M transmembrane N-terminal domain SMA_RS08215 PF00005 ABC transporter SMA_RS08220 PF00999 Sodium/hydrogen exchanger family SMA_RS08230 PF06962 Putative rRNA methylase SMA_RS08235 PF04055 Radical SAM superfamily SMA_RS08235 PF16199 Radical_SAM C-terminal domain SMA_RS08240 PF01569 PAP2 superfamily SMA_RS08245 PF00892 EamA-like transporter family SMA_RS08250 PF12822 ECF transporter, substrate-specific component SMA_RS08255 PF00588 SpoU rRNA Methylase family SMA_RS08275 PF13520 Amino acid permease SMA_RS08280 PF02080 TrkA-C domain SMA_RS08280 PF02254 TrkA-N domain SMA_RS08285 PF02386 Cation transport protein SMA_RS08290 PF01809 Putative membrane protein insertion efficiency factor SMA_RS08295 PF00849 RNA pseudouridylate synthase SMA_RS08295 PF01479 S4 domain SMA_RS08300 PF04079 Segregation and condensation complex subunit ScpB SMA_RS08305 PF02616 Segregation and condensation protein ScpA SMA_RS08310 PF00589 Phage integrase family SMA_RS08325 PF01725 Ham1 family SMA_RS08330 PF01177 Asp/Glu/Hydantoin racemase SMA_RS08335 PF03672 Uncharacterised protein family (UPF0154) SMA_RS08340 PF00665 Integrase core domain SMA_RS08340 PF13936 Helix-turn-helix domain SMA_RS08345 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain SMA_RS08345 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain SMA_RS08350 PF01027 Inhibitor of apoptosis-promoting Bax1 SMA_RS08360 PF00588 SpoU rRNA Methylase family SMA_RS08360 PF08032 RNA 2'-O ribose methyltransferase substrate binding SMA_RS08365 PF00708 Acylphosphatase SMA_RS08370 PF02096 60Kd inner membrane protein SMA_RS08375 PF13936 Helix-turn-helix domain SMA_RS08375 PF00665 Integrase core domain SMA_RS08380 PF01272 Transcription elongation factor, GreA/GreB, C-term SMA_RS08380 PF03449 Transcription elongation factor, N-terminal SMA_RS08385 PF02618 YceG-like family SMA_RS08400 PF13007 Transposase C of IS166 homeodomain SMA_RS08400 PF13817 IS66 C-terminal element SMA_RS08400 PF13005 zinc-finger binding domain of transposase IS66 SMA_RS08400 PF03050 Transposase IS66 family SMA_RS08425 PF13683 Integrase core domain SMA_RS08425 PF01610 Transposase SMA_RS08430 PF02875 Mur ligase family, glutamate ligase domain SMA_RS08430 PF08245 Mur ligase middle domain SMA_RS08430 PF01225 Mur ligase family, catalytic domain SMA_RS08440 PF00176 SNF2 family N-terminal domain SMA_RS08440 PF00271 Helicase conserved C-terminal domain SMA_RS08440 PF04434 SWIM zinc finger SMA_RS08445 PF01926 50S ribosome-binding GTPase SMA_RS08445 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal SMA_RS08450 PF07319 Primosomal protein DnaI N-terminus SMA_RS08450 PF01695 IstB-like ATP binding protein SMA_RS08460 PF03477 ATP cone domain SMA_RS08465 PF00512 His Kinase A (phospho-acceptor) domain SMA_RS08465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMA_RS08465 PF18719 ArlS sensor domain SMA_RS08470 PF00072 Response regulator receiver domain SMA_RS08470 PF00486 Transcriptional regulatory protein, C terminal SMA_RS08480 PF01435 Peptidase family M48 SMA_RS08485 PF04011 LemA family SMA_RS08490 PF02527 rRNA small subunit methyltransferase G SMA_RS08495 PF02386 Cation transport protein SMA_RS08500 PF02254 TrkA-N domain SMA_RS08500 PF02080 TrkA-C domain SMA_RS08510 PF00005 ABC transporter SMA_RS08510 PF12558 ATP-binding cassette cobalt transporter SMA_RS08515 PF07155 ECF-type riboflavin transporter, S component SMA_RS08525 PF00375 Sodium:dicarboxylate symporter family SMA_RS08530 PF05525 Branched-chain amino acid transport protein SMA_RS08535 PF13460 NAD(P)H-binding SMA_RS08540 PF02082 Transcriptional regulator SMA_RS08545 PF00528 Binding-protein-dependent transport system inner membrane component SMA_RS08550 PF00005 ABC transporter SMA_RS08550 PF09383 NIL domain SMA_RS08555 PF07687 Peptidase dimerisation domain SMA_RS08555 PF01546 Peptidase family M20/M25/M40 SMA_RS08560 PF03180 NLPA lipoprotein SMA_RS08565 PF00497 Bacterial extracellular solute-binding proteins, family 3 SMA_RS08570 PF01546 Peptidase family M20/M25/M40 SMA_RS08570 PF07687 Peptidase dimerisation domain SMA_RS08575 PF00497 Bacterial extracellular solute-binding proteins, family 3 SMA_RS08580 PF07722 Peptidase C26 SMA_RS08585 PF01709 Transcriptional regulator SMA_RS08595 PF13411 MerR HTH family regulatory protein SMA_RS08595 PF07739 TipAS antibiotic-recognition domain SMA_RS08600 PF05636 HIGH Nucleotidyl Transferase SMA_RS08615 PF13649 Methyltransferase domain SMA_RS08625 PF01966 HD domain SMA_RS08630 PF01467 Cytidylyltransferase-like SMA_RS08635 PF01985 CRS1 / YhbY (CRM) domain SMA_RS08640 PF01926 50S ribosome-binding GTPase SMA_RS08650 PF07690 Major Facilitator Superfamily SMA_RS08655 PF01047 MarR family SMA_RS08660 PF00892 EamA-like transporter family SMA_RS08665 PF02934 GatB/GatE catalytic domain SMA_RS08665 PF02637 GatB domain SMA_RS08670 PF01425 Amidase SMA_RS08675 PF02686 Glu-tRNAGln amidotransferase C subunit SMA_RS08680 PF13683 Integrase core domain SMA_RS08680 PF01610 Transposase SMA_RS08685 PF00857 Isochorismatase family SMA_RS08690 PF06018 CodY GAF-like domain SMA_RS08690 PF08222 CodY helix-turn-helix domain SMA_RS08700 PF00155 Aminotransferase class I and II SMA_RS08710 PF00582 Universal stress protein family SMA_RS08720 PF00710 Asparaginase, N-terminal SMA_RS08720 PF17763 Glutaminase/Asparaginase C-terminal domain SMA_RS08725 PF13443 Cro/C1-type HTH DNA-binding domain SMA_RS08740 PF13683 Integrase core domain SMA_RS08740 PF01610 Transposase SMA_RS08745 PF17191 RecG wedge domain SMA_RS08745 PF00271 Helicase conserved C-terminal domain SMA_RS08745 PF00270 DEAD/DEAH box helicase SMA_RS08750 PF00842 Alanine racemase, C-terminal domain SMA_RS08750 PF01168 Alanine racemase, N-terminal domain SMA_RS08755 PF01648 4'-phosphopantetheinyl transferase superfamily SMA_RS08760 PF00793 DAHP synthetase I family SMA_RS08765 PF00793 DAHP synthetase I family SMA_RS08770 PF02810 SEC-C motif SMA_RS08770 PF01043 SecA preprotein cross-linking domain SMA_RS08770 PF07517 SecA DEAD-like domain SMA_RS08770 PF07516 SecA Wing and Scaffold domain SMA_RS08775 PF00480 ROK family SMA_RS08780 PF00367 phosphotransferase system, EIIB SMA_RS08780 PF02378 Phosphotransferase system, EIIC SMA_RS08780 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 SMA_RS08785 PF00251 Glycosyl hydrolases family 32 N-terminal domain SMA_RS08785 PF08244 Glycosyl hydrolases family 32 C terminal SMA_RS08790 PF00356 Bacterial regulatory proteins, lacI family SMA_RS08795 PF01029 NusB family SMA_RS08800 PF03780 Asp23 family, cell envelope-related function SMA_RS08805 PF01132 Elongation factor P (EF-P) OB domain SMA_RS08805 PF09285 Elongation factor P, C-terminal SMA_RS08805 PF08207 Elongation factor P (EF-P) KOW-like domain SMA_RS08810 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region SMA_RS08815 PF00557 Metallopeptidase family M24 SMA_RS08815 PF01321 Creatinase/Prolidase N-terminal domain SMA_RS08820 PF17760 UvrA interaction domain SMA_RS08820 PF00005 ABC transporter SMA_RS08820 PF17755 UvrA DNA-binding domain SMA_RS08825 PF01544 CorA-like Mg2+ transporter protein SMA_RS08840 PF13443 Cro/C1-type HTH DNA-binding domain SMA_RS08850 PF01084 Ribosomal protein S18 SMA_RS08855 PF00436 Single-strand binding protein family SMA_RS08860 PF01250 Ribosomal protein S6 SMA_RS08870 PF01527 Transposase SMA_RS08885 PF13610 DDE domain SMA_RS08895 PF00730 HhH-GPD superfamily base excision DNA repair protein SMA_RS08895 PF14815 NUDIX domain SMA_RS08915 PF04205 FMN-binding domain SMA_RS08915 PF00890 FAD binding domain SMA_RS08915 PF03358 NADPH-dependent FMN reductase SMA_RS08920 PF11208 Protein of unknown function (DUF2992) SMA_RS08930 PF08240 Alcohol dehydrogenase GroES-like domain SMA_RS08930 PF00107 Zinc-binding dehydrogenase SMA_RS08935 PF00085 Thioredoxin SMA_RS08940 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain SMA_RS08940 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain SMA_RS08955 PF13683 Integrase core domain SMA_RS08955 PF01610 Transposase SMA_RS08960 PF00488 MutS domain V SMA_RS08960 PF01713 Smr domain SMA_RS08975 PF01351 Ribonuclease HII SMA_RS08975 PF11858 Domain of unknown function (DUF3378) SMA_RS08980 PF10502 Signal peptidase, peptidase S26 SMA_RS08985 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain SMA_RS08985 PF13538 UvrD-like helicase C-terminal domain SMA_RS08985 PF14490 Helix-hairpin-helix containing domain SMA_RS08995 PF00817 impB/mucB/samB family SMA_RS08995 PF11798 IMS family HHH motif SMA_RS08995 PF11799 impB/mucB/samB family C-terminal domain SMA_RS09000 PF02901 Pyruvate formate lyase-like SMA_RS09000 PF01228 Glycine radical SMA_RS09015 PF00144 Beta-lactamase SMA_RS09025 PF01610 Transposase SMA_RS09025 PF13683 Integrase core domain SMA_RS09030 PF00230 Major intrinsic protein SMA_RS09035 PF09168 X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal SMA_RS09035 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain SMA_RS09035 PF02129 X-Pro dipeptidyl-peptidase (S15 family) SMA_RS09040 PF00512 His Kinase A (phospho-acceptor) domain SMA_RS09040 PF16736 Single Cache-like SMA_RS09040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SMA_RS09040 PF00989 PAS fold SMA_RS09045 PF00072 Response regulator receiver domain SMA_RS09045 PF00486 Transcriptional regulatory protein, C terminal SMA_RS09050 PF01895 PhoU domain SMA_RS09055 PF00005 ABC transporter SMA_RS09060 PF00528 Binding-protein-dependent transport system inner membrane component SMA_RS09065 PF00528 Binding-protein-dependent transport system inner membrane component SMA_RS09070 PF12849 PBP superfamily domain SMA_RS09075 PF02575 YbaB/EbfC DNA-binding family SMA_RS09080 PF13411 MerR HTH family regulatory protein SMA_RS09080 PF07739 TipAS antibiotic-recognition domain SMA_RS09085 PF17657 Bacterial DNA polymerase III alpha subunit finger domain SMA_RS09085 PF14579 Helix-hairpin-helix motif SMA_RS09085 PF11490 DNA polymerase III polC-type N-terminus II SMA_RS09085 PF00929 Exonuclease SMA_RS09085 PF07733 Bacterial DNA polymerase III alpha NTPase domain SMA_RS09085 PF02811 PHP domain SMA_RS09090 PF08279 HTH domain SMA_RS09090 PF04394 Protein of unknown function, DUF536 SMA_RS09100 PF00253 Ribosomal protein S14p/S29e SMA_RS09115 PF03591 AzlC protein SMA_RS09120 PF00814 Glycoprotease family SMA_RS09130 PF00814 Glycoprotease family SMA_RS09135 PF07288 Protein of unknown function (DUF1447) SMA_RS09140 PF17770 Ribonuclease J C-terminal domain SMA_RS09140 PF00753 Metallo-beta-lactamase superfamily SMA_RS09140 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain SMA_RS09150 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster SMA_RS09150 PF07992 Pyridine nucleotide-disulphide oxidoreductase SMA_RS09155 PF00310 Glutamine amidotransferases class-II SMA_RS09155 PF01645 Conserved region in glutamate synthase SMA_RS09155 PF01493 GXGXG motif SMA_RS09155 PF04898 Glutamate synthase central domain SMA_RS09160 PF03951 Glutamine synthetase, beta-Grasp domain SMA_RS09160 PF00120 Glutamine synthetase, catalytic domain SMA_RS09165 PF13411 MerR HTH family regulatory protein SMA_RS09175 PF00162 Phosphoglycerate kinase SMA_RS09180 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain SMA_RS09180 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain SMA_RS09185 PF03144 Elongation factor Tu domain 2 SMA_RS09185 PF00009 Elongation factor Tu GTP binding domain SMA_RS09185 PF03764 Elongation factor G, domain IV SMA_RS09185 PF14492 Elongation Factor G, domain II SMA_RS09185 PF00679 Elongation factor G C-terminus SMA_RS09190 PF00177 Ribosomal protein S7p/S5e SMA_RS09195 PF00164 Ribosomal protein S12/S23 SMA_RS09200 PF09182 Bacterial purine repressor, N-terminal SMA_RS09200 PF00156 Phosphoribosyl transferase domain SMA_RS09205 PF01966 HD domain SMA_RS09205 PF01336 OB-fold nucleic acid binding domain SMA_RS09210 PF02646 RmuC family SMA_RS09220 PF00834 Ribulose-phosphate 3 epimerase family SMA_RS09225 PF16745 RsgA N-terminal domain SMA_RS09225 PF03193 RsgA GTPase SMA_RS09280 PF13333 Integrase core domain SMA_RS09280 PF00665 Integrase core domain SMA_RS09280 PF13276 HTH-like domain SMA_RS09285 PF01527 Transposase SMA_RS09295 PF00899 ThiF family SMA_RS09340 PF00398 Ribosomal RNA adenine dimethylase SMA_RS09350 PF13331 Domain of unknown function (DUF4093) SMA_RS09355 PF01026 TatD related DNase SMA_RS09385 PF10502 Signal peptidase, peptidase S26 SMA_RS09405 PF01297 Zinc-uptake complex component A periplasmic SMA_RS09410 PF03390 2-hydroxycarboxylate transporter family SMA_RS09415 PF00390 Malic enzyme, N-terminal domain SMA_RS09415 PF03949 Malic enzyme, NAD binding domain SMA_RS09420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SMA_RS09420 PF03466 LysR substrate binding domain SMA_RS09425 PF04914 DltD protein SMA_RS09430 PF00550 Phosphopantetheine attachment site SMA_RS09435 PF03062 MBOAT, membrane-bound O-acyltransferase family SMA_RS09440 PF00501 AMP-binding enzyme SMA_RS09440 PF13193 AMP-binding enzyme C-terminal domain SMA_RS09450 PF05532 CsbD-like SMA_RS09455 PF01813 ATP synthase subunit D SMA_RS09460 PF02874 ATP synthase alpha/beta family, beta-barrel domain SMA_RS09460 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SMA_RS09475 PF00468 Ribosomal protein L34 SMA_RS09485 PF12728 Helix-turn-helix domain SMA_RS09485 PF02661 Fic/DOC family SMA_RS09490 PF13276 HTH-like domain SMA_RS09490 PF00665 Integrase core domain SMA_RS09490 PF13333 Integrase core domain SMA_RS09505 PF00403 Heavy-metal-associated domain SMA_RS09510 PF00403 Heavy-metal-associated domain SMA_RS09520 PF00403 Heavy-metal-associated domain SMA_RS09525 PF00403 Heavy-metal-associated domain SMA_RS09530 PF03965 Penicillinase repressor SMA_RS09540 PF01758 Sodium Bile acid symporter family SMA_RS09545 PF13333 Integrase core domain SMA_RS09545 PF00665 Integrase core domain SMA_RS09545 PF13276 HTH-like domain SMA_RS09550 PF01527 Transposase SMA_RS09555 PF03432 Relaxase/Mobilisation nuclease domain SMA_RS09570 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) SMA_RS09575 PF03109 ABC1 family SMA_RS09605 PF13276 HTH-like domain SMA_RS09605 PF00665 Integrase core domain SMA_RS09605 PF13333 Integrase core domain SMA_RS09640 PF02796 Helix-turn-helix domain of resolvase SMA_RS09640 PF00239 Resolvase, N terminal domain SMA_RS09650 PF03432 Relaxase/Mobilisation nuclease domain SMA_RS09675 PF01751 Toprim domain SMA_RS09675 PF01131 DNA topoisomerase SMA_RS09705 PF00436 Single-strand binding protein family SMA_RS09755 PF06696 Streptococcal surface antigen repeat SMA_RS09755 PF16364 Cell surface antigen C-terminus SMA_RS09755 PF17998 Cell surface antigen I/II C2 terminal domain SMA_RS09755 PF18652 Adhesin P1 N-terminal domain SMA_RS09755 PF08363 Glucan-binding protein C SMA_RS09755 PF00746 LPXTG cell wall anchor motif SMA_RS09795 PF00005 ABC transporter SMA_RS09805 PF02096 60Kd inner membrane protein SMA_RS09810 PF00825 Ribonuclease P SMA_RS09815 PF00206 Lyase SMA_RS09815 PF14698 Argininosuccinate lyase C-terminal SMA_RS09820 PF00764 Arginosuccinate synthase SMA_RS09825 PF07690 Major Facilitator Superfamily SMA_RS09830 PF00749 tRNA synthetases class I (E and Q), catalytic domain SMA_RS09840 PF13610 DDE domain SMA_RS09855 PF00484 Carbonic anhydrase SMA_RS09860 PF18073 Rubredoxin metal binding domain SMA_RS09870 PF00692 dUTPase SMA_RS09880 PF02677 Epoxyqueuosine reductase QueH SMA_RS09885 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus SMA_RS09885 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus SMA_RS09890 PF00483 Nucleotidyl transferase SMA_RS09895 PF01694 Rhomboid family SMA_RS09900 PF01812 5-formyltetrahydrofolate cyclo-ligase family SMA_RS09905 PF01546 Peptidase family M20/M25/M40 SMA_RS09905 PF07687 Peptidase dimerisation domain SMA_RS09910 PF00132 Bacterial transferase hexapeptide (six repeats) SMA_RS09910 PF14602 Hexapeptide repeat of succinyl-transferase SMA_RS09910 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal SMA_RS09935 PF00342 Phosphoglucose isomerase SMA_RS09940 PF14437 MafB19-like deaminase SMA_RS09945 PF12706 Beta-lactamase superfamily domain SMA_RS09950 PF02632 BioY family SMA_RS09955 PF01702 Queuine tRNA-ribosyltransferase SMA_RS09965 PF01475 Ferric uptake regulator family SMA_RS09970 PF05870 Phenolic acid decarboxylase (PAD) SMA_RS09980 PF13380 CoA binding domain SMA_RS09985 PF01367 5'-3' exonuclease, C-terminal SAM fold SMA_RS09985 PF00476 DNA polymerase family A SMA_RS09985 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain SMA_RS10010 PF00709 Adenylosuccinate synthetase SMA_RS10015 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain SMA_RS10015 PF18419 ATP-grasp-like domain SMA_RS10015 PF04262 Glutamate-cysteine ligase SMA_RS10030 PF01430 Hsp33 protein SMA_RS10035 PF01207 Dihydrouridine synthase (Dus) SMA_RS10040 PF00004 ATPase family associated with various cellular activities (AAA) SMA_RS10040 PF07724 AAA domain (Cdc48 subfamily) SMA_RS10040 PF02861 Clp amino terminal domain, pathogenicity island component SMA_RS10040 PF10431 C-terminal, D2-small domain, of ClpB protein SMA_RS10040 PF17871 AAA lid domain SMA_RS10045 PF17727 CtsR C-terminal dimerization domain SMA_RS10045 PF05848 CtsR N-terminal HTH domain SMA_RS10060 PF00889 Elongation factor TS SMA_RS10065 PF00318 Ribosomal protein S2 SMA_RS10075 PF17676 LD-carboxypeptidase C-terminal domain SMA_RS10075 PF02016 LD-carboxypeptidase N-terminal domain SMA_RS10085 PF05649 Peptidase family M13 SMA_RS10085 PF01431 Peptidase family M13 SMA_RS10090 PF02894 Oxidoreductase family, C-terminal alpha/beta domain SMA_RS10090 PF01408 Oxidoreductase family, NAD-binding Rossmann fold SMA_RS10095 PF00128 Alpha amylase, catalytic domain SMA_RS10095 PF16657 Maltogenic Amylase, C-terminal domain SMA_RS10105 PF17864 RuvB AAA lid domain SMA_RS10105 PF05491 RuvB C-terminal winged helix domain SMA_RS10105 PF05496 Holliday junction DNA helicase RuvB P-loop domain SMA_RS10120 PF03477 ATP cone domain SMA_RS10120 PF13597 Anaerobic ribonucleoside-triphosphate reductase SMA_RS10130 PF06949 Protein of unknown function (DUF1292) SMA_RS10135 PF03652 Holliday junction resolvase SMA_RS10140 PF06135 IreB regulatory phosphoprotein SMA_RS10145 PF03960 ArsC family SMA_RS10150 PF00154 recA bacterial DNA recombination protein SMA_RS10155 PF18146 Damage-inducible protein CinA KH domain SMA_RS10155 PF00994 Probable molybdopterin binding domain SMA_RS10155 PF02464 Competence-damaged protein SMA_RS10180 PF07499 RuvA, C-terminal domain SMA_RS10180 PF01330 RuvA N terminal domain SMA_RS10185 PF01119 DNA mismatch repair protein, C-terminal domain SMA_RS10185 PF08676 MutL C terminal dimerisation domain SMA_RS10190 PF01624 MutS domain I SMA_RS10190 PF05188 MutS domain II SMA_RS10190 PF00488 MutS domain V SMA_RS10190 PF05192 MutS domain III SMA_RS10190 PF05190 MutS family domain IV SMA_RS10200 PF02863 Arginine repressor, C-terminal domain SMA_RS10200 PF01316 Arginine repressor, DNA binding domain SMA_RS10205 PF00750 tRNA synthetases class I (R) SMA_RS10205 PF05746 DALR anticodon binding domain SMA_RS10205 PF03485 Arginyl tRNA synthetase N terminal domain SMA_RS10220 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) SMA_RS10220 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 SMA_RS10225 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 SMA_RS10225 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) SMA_RS10230 PF02938 GAD domain SMA_RS10230 PF01336 OB-fold nucleic acid binding domain SMA_RS10230 PF00152 tRNA synthetases class II (D, K and N) SMA_RS10235 PF13393 Histidyl-tRNA synthetase SMA_RS10235 PF03129 Anticodon binding domain SMA_RS10240 PF01883 Iron-sulfur cluster assembly protein SMA_RS10245 PF00920 Dehydratase family SMA_RS10250 PF01783 Ribosomal L32p protein family SMA_RS10255 PF00471 Ribosomal protein L33 SMA_RS10260 PF04226 Transglycosylase associated protein SMA_RS10275 PF03780 Asp23 family, cell envelope-related function SMA_RS10310 PF06993 Protein of unknown function (DUF1304) SMA_RS10320 PF00440 Bacterial regulatory proteins, tetR family SMA_RS10330 PF01479 S4 domain SMA_RS10330 PF00163 Ribosomal protein S4/S9 N-terminal domain SMA_RS10335 PF06257 Biofilm formation stimulator VEG SMA_RS10340 PF00772 DnaB-like helicase N terminal domain SMA_RS10340 PF03796 DnaB-like helicase C terminal domain SMA_RS10345 PF01281 Ribosomal protein L9, N-terminal domain SMA_RS10345 PF03948 Ribosomal protein L9, C-terminal domain SMA_RS10350 PF02272 DHHA1 domain SMA_RS10350 PF01368 DHH family SMA_RS10355 PF13932 GidA associated domain SMA_RS10355 PF01134 Glucose inhibited division protein A SMA_RS10365 PF01842 ACT domain SMA_RS10365 PF03315 Serine dehydratase beta chain SMA_RS10370 PF03313 Serine dehydratase alpha chain SMA_RS10375 PF13419 Haloacid dehalogenase-like hydrolase SMA_RS10380 PF06737 Transglycosylase-like domain SMA_RS10385 PF00877 NlpC/P60 family SMA_RS10385 PF01476 LysM domain SMA_RS10385 PF08239 Bacterial SH3 domain SMA_RS10390 PF02361 Cobalt transport protein SMA_RS10395 PF00005 ABC transporter SMA_RS10400 PF00005 ABC transporter SMA_RS10405 PF01066 CDP-alcohol phosphatidyltransferase SMA_RS10415 PF05193 Peptidase M16 inactive domain SMA_RS10415 PF00675 Insulinase (Peptidase family M16) SMA_RS10420 PF05193 Peptidase M16 inactive domain SMA_RS10430 PF00313 'Cold-shock' DNA-binding domain SMA_RS10475 PF02463 RecF/RecN/SMC N terminal domain SMA_RS10480 PF06800 Sugar transport protein SMA_RS10485 PF00571 CBS domain SMA_RS10485 PF00478 IMP dehydrogenase / GMP reductase domain SMA_RS10490 PF00579 tRNA synthetases class I (W and Y) SMA_RS10495 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) SMA_RS10495 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 SMA_RS10500 PF00005 ABC transporter SMA_RS10500 PF12848 ABC transporter SMA_RS10520 PF13936 Helix-turn-helix domain SMA_RS10525 PF13936 Helix-turn-helix domain SMA_RS10535 PF02590 Predicted SPOUT methyltransferase SMA_RS10540 PF13180 PDZ domain SMA_RS10545 PF02195 ParB-like nuclease domain SMA_RS10545 PF17762 HTH domain found in ParB protein SMA_RS10555 PF00308 Bacterial dnaA protein SMA_RS10555 PF08299 Bacterial dnaA protein helix-turn-helix SMA_RS10635 PF14659 Phage integrase, N-terminal SAM-like domain SMA_RS10635 PF00589 Phage integrase family SMA_RS10650 PF00754 F5/8 type C domain SMA_RS10650 PF02368 Bacterial Ig-like domain (group 2)