SMA_RS00305 4cd78b07b398f43f845980bf0512a691 430 PANTHER PTHR11206 5 421 9.1E-76 T 25-04-2016 SMA_RS00305 4cd78b07b398f43f845980bf0512a691 430 Pfam PF01554 MatE 227 388 1.1E-24 T 25-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 SMA_RS00305 4cd78b07b398f43f845980bf0512a691 430 Pfam PF01554 MatE 13 172 9.5E-30 T 25-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 SMA_RS00305 4cd78b07b398f43f845980bf0512a691 430 PIRSF PIRSF006603 2 429 1.6E-79 T 25-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 SMA_RS00305 4cd78b07b398f43f845980bf0512a691 430 TIGRFAM TIGR00797 matE: MATE efflux family protein 13 401 1.4E-64 T 25-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 SMA_RS00305 4cd78b07b398f43f845980bf0512a691 430 PANTHER PTHR11206:SF95 5 421 9.1E-76 T 25-04-2016 SMA_RS02865 1cb995067a0382f0681e0d2eed80a4b8 172 PANTHER PTHR36834 1 171 1.5E-21 T 25-04-2016 SMA_RS02865 1cb995067a0382f0681e0d2eed80a4b8 172 Pfam PF04892 VanZ like family 24 161 1.1E-17 T 25-04-2016 IPR006976 VanZ-like SMA_RS08785 a069b58a47018b6a879a36e3ca91d81b 479 Gene3D G3DSA:2.115.10.20 43 337 1.1E-14 T 25-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain SMA_RS08785 a069b58a47018b6a879a36e3ca91d81b 479 PANTHER PTHR30175:SF8 1 457 2.2E-170 T 25-04-2016 SMA_RS08785 a069b58a47018b6a879a36e3ca91d81b 479 TIGRFAM TIGR01322 scrB_fam: sucrose-6-phosphate hydrolase 21 456 4.9E-165 T 25-04-2016 IPR006232 Sucrose-6-phosphate hydrolase GO:0004564|GO:0005737|GO:0005975 KEGG: 00052+3.2.1.26|KEGG: 00500+3.2.1.26|UniPathway: UPA00238 SMA_RS08785 a069b58a47018b6a879a36e3ca91d81b 479 PANTHER PTHR30175 1 457 2.2E-170 T 25-04-2016 SMA_RS08785 a069b58a47018b6a879a36e3ca91d81b 479 Pfam PF00251 Glycosyl hydrolases family 32 N-terminal domain 37 340 1.1E-88 T 25-04-2016 IPR013148 Glycosyl hydrolase family 32, N-terminal SMA_RS08785 a069b58a47018b6a879a36e3ca91d81b 479 SUPERFAMILY SSF75005 27 341 5.57E-85 T 25-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain SMA_RS08785 a069b58a47018b6a879a36e3ca91d81b 479 ProSitePatterns PS00609 Glycosyl hydrolases family 32 active site. 37 50 - T 25-04-2016 IPR018053 Glycoside hydrolase, family 32, active site GO:0004553|GO:0005975 KEGG: 00052+3.2.1.26|KEGG: 00500+3.2.1.26 SMA_RS08785 a069b58a47018b6a879a36e3ca91d81b 479 SMART SM00640 37 446 4.6E-123 T 25-04-2016 IPR001362 Glycoside hydrolase, family 32 GO:0004553|GO:0005975 SMA_RS08785 a069b58a47018b6a879a36e3ca91d81b 479 Pfam PF08244 Glycosyl hydrolases family 32 C terminal 381 446 4.3E-7 T 25-04-2016 IPR013189 Glycosyl hydrolase family 32, C-terminal SMA_RS08785 a069b58a47018b6a879a36e3ca91d81b 479 SUPERFAMILY SSF49899 340 478 4.83E-26 T 25-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain SMA_RS08785 a069b58a47018b6a879a36e3ca91d81b 479 Gene3D G3DSA:2.60.120.560 338 468 3.1E-32 T 25-04-2016 IPR013189 Glycosyl hydrolase family 32, C-terminal SMA_RS09530 f54abcc9646cbb1cd8e7fcabe9631138 151 SUPERFAMILY SSF46785 9 124 1.2E-29 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMA_RS09530 f54abcc9646cbb1cd8e7fcabe9631138 151 Pfam PF03965 Penicillinase repressor 10 123 1.2E-37 T 25-04-2016 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 SMA_RS09530 f54abcc9646cbb1cd8e7fcabe9631138 151 PANTHER PTHR34134 8 134 5.5E-30 T 25-04-2016 SMA_RS09530 f54abcc9646cbb1cd8e7fcabe9631138 151 PANTHER PTHR34134:SF1 8 134 5.5E-30 T 25-04-2016 SMA_RS09530 f54abcc9646cbb1cd8e7fcabe9631138 151 Gene3D G3DSA:1.10.10.10 8 82 5.6E-31 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMA_RS09530 f54abcc9646cbb1cd8e7fcabe9631138 151 TIGRFAM TIGR02698 CopY_TcrY: copper transport repressor, CopY/TcrY family 10 138 4.3E-57 T 25-04-2016 IPR014071 Copper transport repressor CopY/TcrY SMA_RS09530 f54abcc9646cbb1cd8e7fcabe9631138 151 PIRSF PIRSF019455 4 135 3.2E-43 T 25-04-2016 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 SMA_RS08920 4e3d4a0e468fe571ee265e4d90abc962 142 Pfam PF11208 Protein of unknown function (DUF2992) 3 142 8.9E-43 T 25-04-2016 IPR016787 Uncharacterised conserved protein UCP021328 SMA_RS08920 4e3d4a0e468fe571ee265e4d90abc962 142 PIRSF PIRSF021328 1 142 1.2E-41 T 25-04-2016 IPR016787 Uncharacterised conserved protein UCP021328 SMA_RS07715 32068191db6288305faddd8921e4aace 648 PANTHER PTHR11451 1 644 9.3E-305 T 25-04-2016 SMA_RS07715 32068191db6288305faddd8921e4aace 648 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 66 641 34.287 T 25-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 SMA_RS07715 32068191db6288305faddd8921e4aace 648 Gene3D G3DSA:3.10.20.30 1 64 1.6E-25 T 25-04-2016 IPR012675 Beta-grasp domain SMA_RS07715 32068191db6288305faddd8921e4aace 648 SMART SM00863 169 218 1.0E-23 T 25-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 SMA_RS07715 32068191db6288305faddd8921e4aace 648 SUPERFAMILY SSF52954 533 639 6.64E-33 T 25-04-2016 IPR004154 Anticodon-binding SMA_RS07715 32068191db6288305faddd8921e4aace 648 SUPERFAMILY SSF55681 242 532 6.37E-97 T 25-04-2016 SMA_RS07715 32068191db6288305faddd8921e4aace 648 Gene3D G3DSA:3.30.54.20 131 186 3.7E-21 T 25-04-2016 SMA_RS07715 32068191db6288305faddd8921e4aace 648 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 72 637 5.5E-227 T 25-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 SMA_RS07715 32068191db6288305faddd8921e4aace 648 Pfam PF03129 Anticodon binding domain 547 636 4.6E-23 T 25-04-2016 IPR004154 Anticodon-binding SMA_RS07715 32068191db6288305faddd8921e4aace 648 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 169 218 2.7E-16 T 25-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 SMA_RS07715 32068191db6288305faddd8921e4aace 648 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 325 535 1.8E-35 T 25-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SMA_RS07715 32068191db6288305faddd8921e4aace 648 Gene3D G3DSA:3.40.50.800 537 642 4.1E-35 T 25-04-2016 IPR004154 Anticodon-binding SMA_RS07715 32068191db6288305faddd8921e4aace 648 SUPERFAMILY SSF55186 63 240 2.22E-62 T 25-04-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 SMA_RS07715 32068191db6288305faddd8921e4aace 648 SUPERFAMILY SSF81271 2 61 6.1E-17 T 25-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 SMA_RS07715 32068191db6288305faddd8921e4aace 648 PANTHER PTHR11451:SF5 1 644 9.3E-305 T 25-04-2016 SMA_RS07715 32068191db6288305faddd8921e4aace 648 Pfam PF02824 TGS domain 2 61 1.3E-12 T 25-04-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 SMA_RS07715 32068191db6288305faddd8921e4aace 648 Gene3D G3DSA:3.30.980.10 66 130 3.3E-36 T 25-04-2016 SMA_RS07715 32068191db6288305faddd8921e4aace 648 Gene3D G3DSA:3.30.980.10 187 222 3.3E-36 T 25-04-2016 SMA_RS07715 32068191db6288305faddd8921e4aace 648 Gene3D G3DSA:3.30.930.10 241 536 4.3E-108 T 25-04-2016 SMA_RS07715 32068191db6288305faddd8921e4aace 648 PRINTS PR01047 Threonyl-tRNA synthetase signature 513 526 3.1E-46 T 25-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 SMA_RS07715 32068191db6288305faddd8921e4aace 648 PRINTS PR01047 Threonyl-tRNA synthetase signature 364 387 3.1E-46 T 25-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 SMA_RS07715 32068191db6288305faddd8921e4aace 648 PRINTS PR01047 Threonyl-tRNA synthetase signature 470 498 3.1E-46 T 25-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 SMA_RS07715 32068191db6288305faddd8921e4aace 648 PRINTS PR01047 Threonyl-tRNA synthetase signature 331 359 3.1E-46 T 25-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 SMA_RS07715 32068191db6288305faddd8921e4aace 648 PRINTS PR01047 Threonyl-tRNA synthetase signature 540 552 3.1E-46 T 25-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 SMA_RS05230 d0ecac1b8cfd3373c6079bd91075d7f7 329 PIRSF PIRSF000102 4 324 5.8E-105 T 25-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 SMA_RS05230 d0ecac1b8cfd3373c6079bd91075d7f7 329 Hamap MF_00488 L-lactate dehydrogenase [ldh]. 7 318 45.071 T 25-04-2016 IPR011304 L-lactate dehydrogenase GO:0004459|GO:0005737|GO:0055114 KEGG: 00010+1.1.1.27|KEGG: 00270+1.1.1.27|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-6901|UniPathway: UPA00554 SMA_RS05230 d0ecac1b8cfd3373c6079bd91075d7f7 329 ProSitePatterns PS00064 L-lactate dehydrogenase active site. 178 184 - T 25-04-2016 IPR018177 L-lactate dehydrogenase, active site GO:0004459|GO:0055114 KEGG: 00010+1.1.1.27|KEGG: 00270+1.1.1.27|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-6901|UniPathway: UPA00554 SMA_RS05230 d0ecac1b8cfd3373c6079bd91075d7f7 329 TIGRFAM TIGR01771 L-LDH-NAD: L-lactate dehydrogenase 12 311 1.7E-122 T 25-04-2016 IPR011304 L-lactate dehydrogenase GO:0004459|GO:0005737|GO:0055114 KEGG: 00010+1.1.1.27|KEGG: 00270+1.1.1.27|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-6901|UniPathway: UPA00554 SMA_RS05230 d0ecac1b8cfd3373c6079bd91075d7f7 329 SUPERFAMILY SSF56327 149 317 1.28E-55 T 25-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 SMA_RS05230 d0ecac1b8cfd3373c6079bd91075d7f7 329 Gene3D G3DSA:3.90.110.10 150 317 1.2E-60 T 25-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 SMA_RS05230 d0ecac1b8cfd3373c6079bd91075d7f7 329 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 9 148 4.0E-45 T 25-04-2016 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 SMA_RS05230 d0ecac1b8cfd3373c6079bd91075d7f7 329 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 151 319 1.9E-42 T 25-04-2016 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 SMA_RS05230 d0ecac1b8cfd3373c6079bd91075d7f7 329 PANTHER PTHR11540 4 328 6.3E-149 T 25-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 SMA_RS05230 d0ecac1b8cfd3373c6079bd91075d7f7 329 SUPERFAMILY SSF51735 4 150 3.72E-50 T 25-04-2016 IPR016040 NAD(P)-binding domain SMA_RS05230 d0ecac1b8cfd3373c6079bd91075d7f7 329 PRINTS PR00086 L-lactate dehydrogenase signature 9 33 1.0E-43 T 25-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 SMA_RS05230 d0ecac1b8cfd3373c6079bd91075d7f7 329 PRINTS PR00086 L-lactate dehydrogenase signature 36 60 1.0E-43 T 25-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 SMA_RS05230 d0ecac1b8cfd3373c6079bd91075d7f7 329 PRINTS PR00086 L-lactate dehydrogenase signature 146 164 1.0E-43 T 25-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 SMA_RS05230 d0ecac1b8cfd3373c6079bd91075d7f7 329 PRINTS PR00086 L-lactate dehydrogenase signature 176 189 1.0E-43 T 25-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 SMA_RS05230 d0ecac1b8cfd3373c6079bd91075d7f7 329 PRINTS PR00086 L-lactate dehydrogenase signature 122 142 1.0E-43 T 25-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 SMA_RS05230 d0ecac1b8cfd3373c6079bd91075d7f7 329 PANTHER PTHR11540:SF3 4 328 6.3E-149 T 25-04-2016 SMA_RS05230 d0ecac1b8cfd3373c6079bd91075d7f7 329 Gene3D G3DSA:3.40.50.720 3 149 2.0E-50 T 25-04-2016 IPR016040 NAD(P)-binding domain SMA_RS03595 bda36faa1d9123c128a037d5ab5ec282 476 PANTHER PTHR11699 4 474 2.7E-282 T 25-04-2016 SMA_RS03595 bda36faa1d9123c128a037d5ab5ec282 476 Gene3D G3DSA:3.40.309.10 265 444 2.3E-64 T 25-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 SMA_RS03595 bda36faa1d9123c128a037d5ab5ec282 476 Pfam PF00171 Aldehyde dehydrogenase family 17 469 2.1E-150 T 25-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 SMA_RS03595 bda36faa1d9123c128a037d5ab5ec282 476 SUPERFAMILY SSF53720 3 472 1.31E-144 T 25-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 SMA_RS03595 bda36faa1d9123c128a037d5ab5ec282 476 Gene3D G3DSA:3.40.605.10 3 264 2.4E-87 T 25-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 SMA_RS03595 bda36faa1d9123c128a037d5ab5ec282 476 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 277 288 - T 25-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 SMA_RS03595 bda36faa1d9123c128a037d5ab5ec282 476 PANTHER PTHR11699:SF160 4 474 2.7E-282 T 25-04-2016 SMA_RS01980 2e89a043dfeeba766568fc1fcc9fef27 309 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SMA_RS01980 2e89a043dfeeba766568fc1fcc9fef27 309 SUPERFAMILY SSF52540 8 253 5.57E-74 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS01980 2e89a043dfeeba766568fc1fcc9fef27 309 PANTHER PTHR24220:SF336 10 276 1.4E-141 T 25-04-2016 SMA_RS01980 2e89a043dfeeba766568fc1fcc9fef27 309 Gene3D G3DSA:3.40.50.300 5 257 2.4E-83 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS01980 2e89a043dfeeba766568fc1fcc9fef27 309 SMART SM00382 38 231 4.9E-11 T 25-04-2016 IPR003593 AAA+ ATPase domain SMA_RS01980 2e89a043dfeeba766568fc1fcc9fef27 309 Pfam PF00005 ABC transporter 30 181 3.0E-33 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMA_RS01980 2e89a043dfeeba766568fc1fcc9fef27 309 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 233 275 5.3E-8 T 25-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 SMA_RS01980 2e89a043dfeeba766568fc1fcc9fef27 309 PANTHER PTHR24220 10 276 1.4E-141 T 25-04-2016 SMA_RS04715 c2440120bc36870513f63e39bf4c574c 372 PANTHER PTHR21716 41 360 4.1E-47 T 25-04-2016 IPR002549 Transmembrane protein TqsA-like SMA_RS04715 c2440120bc36870513f63e39bf4c574c 372 Pfam PF01594 Domain of unknown function DUF20 49 359 2.3E-43 T 25-04-2016 IPR002549 Transmembrane protein TqsA-like SMA_RS08930 d31c5b8fa08febe69d0fd6f6442844e6 347 PANTHER PTHR11695:SF601 12 347 4.5E-129 T 25-04-2016 SMA_RS08930 d31c5b8fa08febe69d0fd6f6442844e6 347 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 127 9.7E-23 T 25-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 SMA_RS08930 d31c5b8fa08febe69d0fd6f6442844e6 347 Pfam PF00107 Zinc-binding dehydrogenase 181 274 4.9E-20 T 25-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 SMA_RS08930 d31c5b8fa08febe69d0fd6f6442844e6 347 PANTHER PTHR11695 12 347 4.5E-129 T 25-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 SMA_RS08930 d31c5b8fa08febe69d0fd6f6442844e6 347 SUPERFAMILY SSF50129 1 181 4.72E-42 T 25-04-2016 IPR011032 GroES-like SMA_RS08930 d31c5b8fa08febe69d0fd6f6442844e6 347 Gene3D G3DSA:3.90.180.10 1 172 1.0E-41 T 25-04-2016 IPR011032 GroES-like SMA_RS08930 d31c5b8fa08febe69d0fd6f6442844e6 347 SUPERFAMILY SSF51735 150 310 4.06E-33 T 25-04-2016 IPR016040 NAD(P)-binding domain SMA_RS08930 d31c5b8fa08febe69d0fd6f6442844e6 347 Gene3D G3DSA:3.40.50.720 173 290 1.7E-32 T 25-04-2016 IPR016040 NAD(P)-binding domain SMA_RS08930 d31c5b8fa08febe69d0fd6f6442844e6 347 SMART SM00829 10 344 0.0071 T 25-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 SMA_RS09725 63cc86c116b15d7d8f26aea2257c407e 788 SUPERFAMILY SSF52540 401 740 1.99E-22 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS09725 63cc86c116b15d7d8f26aea2257c407e 788 Gene3D G3DSA:3.40.50.300 433 512 3.4E-12 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS09725 63cc86c116b15d7d8f26aea2257c407e 788 Gene3D G3DSA:3.40.50.300 607 733 3.4E-12 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS09725 63cc86c116b15d7d8f26aea2257c407e 788 Pfam PF12846 AAA-like domain 440 704 6.2E-8 T 25-04-2016 SMA_RS02225 1c4f8e3a7a1bbb2af406f63cdf1c8213 116 PANTHER PTHR33515 1 115 1.3E-37 T 25-04-2016 SMA_RS02225 1c4f8e3a7a1bbb2af406f63cdf1c8213 116 Gene3D G3DSA:3.30.300.20 1 115 1.6E-37 T 25-04-2016 IPR015946 K homology domain-like, alpha/beta SMA_RS02225 1c4f8e3a7a1bbb2af406f63cdf1c8213 116 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 1 116 21.899 T 25-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 SMA_RS02225 1c4f8e3a7a1bbb2af406f63cdf1c8213 116 Pfam PF02033 Ribosome-binding factor A 5 109 9.1E-30 T 25-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 SMA_RS02225 1c4f8e3a7a1bbb2af406f63cdf1c8213 116 SUPERFAMILY SSF89919 1 112 6.15E-30 T 25-04-2016 IPR023799 Ribosome-binding factor A domain SMA_RS02225 1c4f8e3a7a1bbb2af406f63cdf1c8213 116 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 1 113 1.1E-30 T 25-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 SMA_RS02225 1c4f8e3a7a1bbb2af406f63cdf1c8213 116 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 7 96 5.0E-43 T 25-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 SMA_RS02225 1c4f8e3a7a1bbb2af406f63cdf1c8213 116 ProSitePatterns PS01319 Ribosome-binding factor A signature. 75 96 - T 25-04-2016 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 SMA_RS07350 bfec69758673db7d79dcaeb9ab634b3c 230 TIGRFAM TIGR02673 FtsE: cell division ATP-binding protein FtsE 3 216 3.5E-90 T 25-04-2016 IPR005286 Cell division protein FtsE, ATP-binding GO:0005524|GO:0051301 SMA_RS07350 bfec69758673db7d79dcaeb9ab634b3c 230 SMART SM00382 29 216 8.6E-14 T 25-04-2016 IPR003593 AAA+ ATPase domain SMA_RS07350 bfec69758673db7d79dcaeb9ab634b3c 230 PANTHER PTHR24220:SF470 5 230 9.4E-127 T 25-04-2016 SMA_RS07350 bfec69758673db7d79dcaeb9ab634b3c 230 Pfam PF00005 ABC transporter 20 167 9.5E-36 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMA_RS07350 bfec69758673db7d79dcaeb9ab634b3c 230 SUPERFAMILY SSF52540 3 225 6.41E-71 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS07350 bfec69758673db7d79dcaeb9ab634b3c 230 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SMA_RS07350 bfec69758673db7d79dcaeb9ab634b3c 230 Gene3D G3DSA:3.40.50.300 2 222 3.5E-71 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS07350 bfec69758673db7d79dcaeb9ab634b3c 230 PANTHER PTHR24220 5 230 9.4E-127 T 25-04-2016 SMA_RS04675 029d4c0ee1597c94a919718271ac4e3b 280 Gene3D G3DSA:3.40.190.10 122 231 2.4E-23 T 25-04-2016 SMA_RS04675 029d4c0ee1597c94a919718271ac4e3b 280 SMART SM00062 44 272 8.6E-76 T 25-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SMA_RS04675 029d4c0ee1597c94a919718271ac4e3b 280 Gene3D G3DSA:3.40.190.10 41 121 2.9E-41 T 25-04-2016 SMA_RS04675 029d4c0ee1597c94a919718271ac4e3b 280 Gene3D G3DSA:3.40.190.10 232 274 2.9E-41 T 25-04-2016 SMA_RS04675 029d4c0ee1597c94a919718271ac4e3b 280 PANTHER PTHR18966:SF152 40 273 1.9E-37 T 25-04-2016 SMA_RS04675 029d4c0ee1597c94a919718271ac4e3b 280 PANTHER PTHR18966 40 273 1.9E-37 T 25-04-2016 SMA_RS04675 029d4c0ee1597c94a919718271ac4e3b 280 SUPERFAMILY SSF53850 4 272 6.62E-69 T 25-04-2016 SMA_RS04675 029d4c0ee1597c94a919718271ac4e3b 280 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 45 271 2.0E-62 T 25-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SMA_RS09830 146265fad3dd84e8bec9092c4f97fc56 485 PANTHER PTHR11451:SF41 263 336 3.9E-100 T 25-04-2016 SMA_RS09830 146265fad3dd84e8bec9092c4f97fc56 485 PANTHER PTHR11451:SF41 4 247 3.9E-100 T 25-04-2016 SMA_RS09830 146265fad3dd84e8bec9092c4f97fc56 485 Gene3D G3DSA:3.90.800.10 70 197 8.7E-34 T 25-04-2016 SMA_RS09830 146265fad3dd84e8bec9092c4f97fc56 485 Hamap MF_00022_B Glutamate--tRNA ligase [gltX]. 5 481 33.877 T 25-04-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 SMA_RS09830 146265fad3dd84e8bec9092c4f97fc56 485 Gene3D G3DSA:1.10.1160.10 251 335 1.3E-33 T 25-04-2016 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: REACT_71 SMA_RS09830 146265fad3dd84e8bec9092c4f97fc56 485 Gene3D G3DSA:3.40.50.620 198 247 9.8E-52 T 25-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SMA_RS09830 146265fad3dd84e8bec9092c4f97fc56 485 Gene3D G3DSA:3.40.50.620 4 69 9.8E-52 T 25-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SMA_RS09830 146265fad3dd84e8bec9092c4f97fc56 485 SUPERFAMILY SSF52374 4 319 1.77E-103 T 25-04-2016 SMA_RS09830 146265fad3dd84e8bec9092c4f97fc56 485 SUPERFAMILY SSF48163 301 480 2.09E-41 T 25-04-2016 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 SMA_RS09830 146265fad3dd84e8bec9092c4f97fc56 485 PRINTS PR00987 Glutamyl-tRNA synthetase signature 22 33 7.2E-28 T 25-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 SMA_RS09830 146265fad3dd84e8bec9092c4f97fc56 485 PRINTS PR00987 Glutamyl-tRNA synthetase signature 37 50 7.2E-28 T 25-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 SMA_RS09830 146265fad3dd84e8bec9092c4f97fc56 485 PRINTS PR00987 Glutamyl-tRNA synthetase signature 196 206 7.2E-28 T 25-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 SMA_RS09830 146265fad3dd84e8bec9092c4f97fc56 485 PRINTS PR00987 Glutamyl-tRNA synthetase signature 212 220 7.2E-28 T 25-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 SMA_RS09830 146265fad3dd84e8bec9092c4f97fc56 485 PRINTS PR00987 Glutamyl-tRNA synthetase signature 8 20 7.2E-28 T 25-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 SMA_RS09830 146265fad3dd84e8bec9092c4f97fc56 485 Gene3D G3DSA:1.10.10.350 382 481 1.8E-18 T 25-04-2016 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 SMA_RS09830 146265fad3dd84e8bec9092c4f97fc56 485 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 4 326 2.3E-115 T 25-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 SMA_RS09830 146265fad3dd84e8bec9092c4f97fc56 485 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 4 480 7.6E-169 T 25-04-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 SMA_RS09830 146265fad3dd84e8bec9092c4f97fc56 485 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 11 22 - T 25-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SMA_RS09830 146265fad3dd84e8bec9092c4f97fc56 485 PANTHER PTHR11451 263 336 3.9E-100 T 25-04-2016 SMA_RS09830 146265fad3dd84e8bec9092c4f97fc56 485 PANTHER PTHR11451 4 247 3.9E-100 T 25-04-2016 SMA_RS03075 918542b987859680ee3b045e53e92d75 148 PANTHER PTHR22769 16 147 1.8E-19 T 25-04-2016 SMA_RS03075 918542b987859680ee3b045e53e92d75 148 Pfam PF00293 NUDIX domain 18 134 4.8E-15 T 25-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 SMA_RS03075 918542b987859680ee3b045e53e92d75 148 SUPERFAMILY SSF55811 7 145 1.18E-28 T 25-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SMA_RS03075 918542b987859680ee3b045e53e92d75 148 PANTHER PTHR22769:SF35 16 147 1.8E-19 T 25-04-2016 SMA_RS03075 918542b987859680ee3b045e53e92d75 148 ProSitePatterns PS00893 Nudix box signature. 48 69 - T 25-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 SMA_RS03075 918542b987859680ee3b045e53e92d75 148 Gene3D G3DSA:3.90.79.10 2 147 1.1E-45 T 25-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SMA_RS03585 815c98cd585f01c8fcdede1d1bb4e3bf 87 Pfam PF00381 PTS HPr component phosphorylation site 3 81 6.4E-30 T 25-04-2016 IPR000032 Phosphocarrier HPr protein-like SMA_RS03585 815c98cd585f01c8fcdede1d1bb4e3bf 87 PRINTS PR00107 Phosphocarrier protein signature 13 29 7.4E-27 T 25-04-2016 IPR000032 Phosphocarrier HPr protein-like SMA_RS03585 815c98cd585f01c8fcdede1d1bb4e3bf 87 PRINTS PR00107 Phosphocarrier protein signature 53 70 7.4E-27 T 25-04-2016 IPR000032 Phosphocarrier HPr protein-like SMA_RS03585 815c98cd585f01c8fcdede1d1bb4e3bf 87 PRINTS PR00107 Phosphocarrier protein signature 38 53 7.4E-27 T 25-04-2016 IPR000032 Phosphocarrier HPr protein-like SMA_RS03585 815c98cd585f01c8fcdede1d1bb4e3bf 87 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 81 1.1E-32 T 25-04-2016 IPR000032 Phosphocarrier HPr protein-like SMA_RS03585 815c98cd585f01c8fcdede1d1bb4e3bf 87 PANTHER PTHR33705:SF2 1 84 7.3E-37 T 25-04-2016 SMA_RS03585 815c98cd585f01c8fcdede1d1bb4e3bf 87 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 13 20 - T 25-04-2016 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site SMA_RS03585 815c98cd585f01c8fcdede1d1bb4e3bf 87 SUPERFAMILY SSF55594 1 83 2.09E-28 T 25-04-2016 IPR000032 Phosphocarrier HPr protein-like SMA_RS03585 815c98cd585f01c8fcdede1d1bb4e3bf 87 Gene3D G3DSA:3.30.1340.10 1 83 2.0E-34 T 25-04-2016 IPR000032 Phosphocarrier HPr protein-like SMA_RS03585 815c98cd585f01c8fcdede1d1bb4e3bf 87 PANTHER PTHR33705 1 84 7.3E-37 T 25-04-2016 SMA_RS03585 815c98cd585f01c8fcdede1d1bb4e3bf 87 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 39 54 - T 25-04-2016 IPR002114 Phosphotransferase system, HPr serine phosphorylation site SMA_RS03925 98439aa45e10fdf8879d6f65a9e4fc7f 262 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 5 239 1.3E-69 T 25-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 SMA_RS03925 98439aa45e10fdf8879d6f65a9e4fc7f 262 PANTHER PTHR13799 1 262 2.1E-70 T 25-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 SMA_RS03925 98439aa45e10fdf8879d6f65a9e4fc7f 262 SUPERFAMILY SSF102705 1 261 8.37E-82 T 25-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 SMA_RS03925 98439aa45e10fdf8879d6f65a9e4fc7f 262 Gene3D G3DSA:3.40.1390.30 1 112 1.3E-42 T 25-04-2016 SMA_RS03925 98439aa45e10fdf8879d6f65a9e4fc7f 262 Gene3D G3DSA:3.40.1390.30 113 221 9.0E-41 T 25-04-2016 SMA_RS03925 98439aa45e10fdf8879d6f65a9e4fc7f 262 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 1 241 7.3E-57 T 25-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 SMA_RS03925 98439aa45e10fdf8879d6f65a9e4fc7f 262 PANTHER PTHR13799:SF13 1 262 2.1E-70 T 25-04-2016 SMA_RS04580 44d151f7921d34f2f885cfd19d6bc6a7 338 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 158 174 5.6E-82 T 25-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 SMA_RS04580 44d151f7921d34f2f885cfd19d6bc6a7 338 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 6 25 5.6E-82 T 25-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 SMA_RS04580 44d151f7921d34f2f885cfd19d6bc6a7 338 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 213 225 5.6E-82 T 25-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 SMA_RS04580 44d151f7921d34f2f885cfd19d6bc6a7 338 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 176 193 5.6E-82 T 25-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 SMA_RS04580 44d151f7921d34f2f885cfd19d6bc6a7 338 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 31 44 5.6E-82 T 25-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 SMA_RS04580 44d151f7921d34f2f885cfd19d6bc6a7 338 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 138 156 5.6E-82 T 25-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 SMA_RS04580 44d151f7921d34f2f885cfd19d6bc6a7 338 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 241 263 5.6E-82 T 25-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 SMA_RS04580 44d151f7921d34f2f885cfd19d6bc6a7 338 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 120 137 5.6E-82 T 25-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 SMA_RS04580 44d151f7921d34f2f885cfd19d6bc6a7 338 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 93 109 5.6E-82 T 25-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 SMA_RS04580 44d151f7921d34f2f885cfd19d6bc6a7 338 SUPERFAMILY SSF53784 1 299 5.1E-107 T 25-04-2016 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 SMA_RS04580 44d151f7921d34f2f885cfd19d6bc6a7 338 Gene3D G3DSA:3.40.50.450 1 213 1.0E-76 T 25-04-2016 SMA_RS04580 44d151f7921d34f2f885cfd19d6bc6a7 338 PANTHER PTHR13697 1 299 1.2E-126 T 25-04-2016 SMA_RS04580 44d151f7921d34f2f885cfd19d6bc6a7 338 PIRSF PIRSF000532 1 321 5.2E-116 T 25-04-2016 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type GO:0005524|GO:0006002|GO:0006096|GO:0008443 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|UniPathway: UPA00109 SMA_RS04580 44d151f7921d34f2f885cfd19d6bc6a7 338 Pfam PF00365 Phosphofructokinase 3 277 1.5E-107 T 25-04-2016 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 SMA_RS04580 44d151f7921d34f2f885cfd19d6bc6a7 338 TIGRFAM TIGR02482 PFKA_ATP: 6-phosphofructokinase 3 298 1.4E-122 T 25-04-2016 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|UniPathway: UPA00109 SMA_RS04580 44d151f7921d34f2f885cfd19d6bc6a7 338 PANTHER PTHR13697:SF4 1 299 1.2E-126 T 25-04-2016 SMA_RS04580 44d151f7921d34f2f885cfd19d6bc6a7 338 Hamap MF_00339 ATP-dependent 6-phosphofructokinase [pfkA]. 1 336 46.176 T 25-04-2016 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|UniPathway: UPA00109 SMA_RS04580 44d151f7921d34f2f885cfd19d6bc6a7 338 ProSitePatterns PS00433 Phosphofructokinase signature. 245 263 - T 25-04-2016 IPR015912 Phosphofructokinase, conserved site GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 SMA_RS07400 fd4b851bcabad1e95705306c29bddfac 412 PANTHER PTHR36174:SF2 12 411 2.9E-141 T 25-04-2016 SMA_RS07400 fd4b851bcabad1e95705306c29bddfac 412 PANTHER PTHR36174 12 411 2.9E-141 T 25-04-2016 SMA_RS07400 fd4b851bcabad1e95705306c29bddfac 412 Gene3D G3DSA:3.40.630.30 163 239 2.8E-48 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMA_RS07400 fd4b851bcabad1e95705306c29bddfac 412 Gene3D G3DSA:3.40.630.30 306 383 2.8E-48 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMA_RS07400 fd4b851bcabad1e95705306c29bddfac 412 Pfam PF02388 FemAB family 7 407 2.7E-142 T 25-04-2016 IPR003447 FemABX peptidyl transferase GO:0009252|GO:0016755 SMA_RS07400 fd4b851bcabad1e95705306c29bddfac 412 SUPERFAMILY SSF55729 7 160 4.77E-42 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMA_RS07400 fd4b851bcabad1e95705306c29bddfac 412 SUPERFAMILY SSF55729 163 240 2.87E-32 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMA_RS07400 fd4b851bcabad1e95705306c29bddfac 412 SUPERFAMILY SSF55729 307 403 2.87E-32 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMA_RS07400 fd4b851bcabad1e95705306c29bddfac 412 SUPERFAMILY SSF46589 240 303 1.31E-10 T 25-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 SMA_RS07400 fd4b851bcabad1e95705306c29bddfac 412 Gene3D G3DSA:3.40.630.30 4 162 2.4E-44 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMA_RS01580 9a47b0ab4621b780613ea56cbc951094 445 Pfam PF05167 Uncharacterised ACR (DUF711) 12 409 7.1E-169 T 25-04-2016 IPR007841 Uncharacterised protein family UPF0210 SMA_RS01580 9a47b0ab4621b780613ea56cbc951094 445 SUPERFAMILY SSF51998 2 440 2.65E-177 T 25-04-2016 SMA_RS01580 9a47b0ab4621b780613ea56cbc951094 445 PANTHER PTHR37560:SF2 1 445 2.9E-245 T 25-04-2016 SMA_RS01580 9a47b0ab4621b780613ea56cbc951094 445 PANTHER PTHR37560 1 445 2.9E-245 T 25-04-2016 SMA_RS01580 9a47b0ab4621b780613ea56cbc951094 445 Hamap MF_01221 UPF0210 protein . 1 445 51.472 T 25-04-2016 IPR007841 Uncharacterised protein family UPF0210 SMA_RS01580 9a47b0ab4621b780613ea56cbc951094 445 Gene3D G3DSA:3.20.70.20 2 445 1.3E-214 T 25-04-2016 SMA_RS01355 7eeacebb4cd869a9d200276e95862fbb 1464 TIGRFAM TIGR01405 polC_Gram_pos: DNA polymerase III, alpha subunit, Gram-positive type 235 1460 0.0 T 25-04-2016 IPR006308 DNA polymerase III, alpha subunit, Gram-positive type GO:0003677|GO:0003887|GO:0005737|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SMA_RS01355 7eeacebb4cd869a9d200276e95862fbb 1464 Hamap MF_00356 DNA polymerase III PolC-type [polC]. 1 1464 429.839 T 25-04-2016 IPR006308 DNA polymerase III, alpha subunit, Gram-positive type GO:0003677|GO:0003887|GO:0005737|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SMA_RS01355 7eeacebb4cd869a9d200276e95862fbb 1464 Pfam PF00929 Exonuclease 427 581 2.6E-34 T 25-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III SMA_RS01355 7eeacebb4cd869a9d200276e95862fbb 1464 SUPERFAMILY SSF53098 425 892 1.94E-97 T 25-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMA_RS01355 7eeacebb4cd869a9d200276e95862fbb 1464 SMART SM00479 425 591 2.0E-43 T 25-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III SMA_RS01355 7eeacebb4cd869a9d200276e95862fbb 1464 Pfam PF14480 DNA polymerase III polC-type N-terminus I 4 76 1.5E-18 T 25-04-2016 IPR028112 DNA polymerase III polC-type, N-terminal domain I KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SMA_RS01355 7eeacebb4cd869a9d200276e95862fbb 1464 PANTHER PTHR23044 841 926 0.0 T 25-04-2016 SMA_RS01355 7eeacebb4cd869a9d200276e95862fbb 1464 PANTHER PTHR23044 944 1085 0.0 T 25-04-2016 SMA_RS01355 7eeacebb4cd869a9d200276e95862fbb 1464 PANTHER PTHR23044 1123 1436 0.0 T 25-04-2016 SMA_RS01355 7eeacebb4cd869a9d200276e95862fbb 1464 PANTHER PTHR23044 22 555 0.0 T 25-04-2016 SMA_RS01355 7eeacebb4cd869a9d200276e95862fbb 1464 Gene3D G3DSA:3.30.420.10 423 593 8.0E-60 T 25-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMA_RS01355 7eeacebb4cd869a9d200276e95862fbb 1464 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 421 639 9.4E-38 T 25-04-2016 IPR006054 DNA polymerase III, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SMA_RS01355 7eeacebb4cd869a9d200276e95862fbb 1464 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 841 1269 2.2E-90 T 25-04-2016 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SMA_RS01355 7eeacebb4cd869a9d200276e95862fbb 1464 Gene3D G3DSA:3.20.20.140 635 811 3.6E-58 T 25-04-2016 SMA_RS01355 7eeacebb4cd869a9d200276e95862fbb 1464 Gene3D G3DSA:3.20.20.140 337 422 3.6E-58 T 25-04-2016 SMA_RS01355 7eeacebb4cd869a9d200276e95862fbb 1464 Pfam PF14579 Helix-hairpin-helix motif 1377 1453 4.1E-6 T 25-04-2016 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SMA_RS01355 7eeacebb4cd869a9d200276e95862fbb 1464 SMART SM00481 340 407 1.1E-25 T 25-04-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 SMA_RS01355 7eeacebb4cd869a9d200276e95862fbb 1464 Pfam PF11490 DNA polymerase III polC-type N-terminus II 92 205 3.1E-22 T 25-04-2016 IPR024754 DNA polymerase III polC-like, N-terminal domain II KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SMA_RS01355 7eeacebb4cd869a9d200276e95862fbb 1464 Pfam PF02811 PHP domain 341 699 1.6E-48 T 25-04-2016 IPR004013 PHP domain GO:0003824 SMA_RS01355 7eeacebb4cd869a9d200276e95862fbb 1464 PANTHER PTHR23044:SF26 841 926 0.0 T 25-04-2016 SMA_RS01355 7eeacebb4cd869a9d200276e95862fbb 1464 PANTHER PTHR23044:SF26 944 1085 0.0 T 25-04-2016 SMA_RS01355 7eeacebb4cd869a9d200276e95862fbb 1464 PANTHER PTHR23044:SF26 1123 1436 0.0 T 25-04-2016 SMA_RS01355 7eeacebb4cd869a9d200276e95862fbb 1464 PANTHER PTHR23044:SF26 22 555 0.0 T 25-04-2016 SMA_RS01355 7eeacebb4cd869a9d200276e95862fbb 1464 SUPERFAMILY SSF89550 351 409 3.65E-5 T 25-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 SMA_RS01355 7eeacebb4cd869a9d200276e95862fbb 1464 Gene3D G3DSA:1.10.150.280 1398 1447 6.5E-8 T 25-04-2016 SMA_RS01355 7eeacebb4cd869a9d200276e95862fbb 1464 SUPERFAMILY SSF50249 238 328 1.71E-13 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMA_RS01355 7eeacebb4cd869a9d200276e95862fbb 1464 Gene3D G3DSA:2.40.50.140 229 329 4.4E-7 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMA_RS05100 829778a12bcfd9a687abb1f6e958d6e1 713 Gene3D G3DSA:3.40.50.140 28 160 4.4E-45 T 25-04-2016 IPR006171 Toprim domain SMA_RS05100 829778a12bcfd9a687abb1f6e958d6e1 713 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 492 506 1.2E-35 T 25-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 SMA_RS05100 829778a12bcfd9a687abb1f6e958d6e1 713 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 319 328 1.2E-35 T 25-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 SMA_RS05100 829778a12bcfd9a687abb1f6e958d6e1 713 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 188 206 1.2E-35 T 25-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 SMA_RS05100 829778a12bcfd9a687abb1f6e958d6e1 713 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 103 116 1.2E-35 T 25-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 SMA_RS05100 829778a12bcfd9a687abb1f6e958d6e1 713 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 395 411 1.2E-35 T 25-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 SMA_RS05100 829778a12bcfd9a687abb1f6e958d6e1 713 PANTHER PTHR11390:SF27 27 708 0.0 T 25-04-2016 SMA_RS05100 829778a12bcfd9a687abb1f6e958d6e1 713 Gene3D G3DSA:3.30.65.10 595 638 2.2E-18 T 25-04-2016 SMA_RS05100 829778a12bcfd9a687abb1f6e958d6e1 713 Pfam PF01131 DNA topoisomerase 154 567 4.8E-132 T 25-04-2016 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 SMA_RS05100 829778a12bcfd9a687abb1f6e958d6e1 713 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 305 328 - T 25-04-2016 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 SMA_RS05100 829778a12bcfd9a687abb1f6e958d6e1 713 Gene3D G3DSA:1.10.460.10 476 580 6.6E-59 T 25-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 SMA_RS05100 829778a12bcfd9a687abb1f6e958d6e1 713 Gene3D G3DSA:1.10.460.10 639 643 6.6E-59 T 25-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 SMA_RS05100 829778a12bcfd9a687abb1f6e958d6e1 713 Gene3D G3DSA:1.10.460.10 161 208 6.6E-59 T 25-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 SMA_RS05100 829778a12bcfd9a687abb1f6e958d6e1 713 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 636 674 1.3E-13 T 25-04-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 SMA_RS05100 829778a12bcfd9a687abb1f6e958d6e1 713 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 677 708 0.094 T 25-04-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 SMA_RS05100 829778a12bcfd9a687abb1f6e958d6e1 713 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 597 632 9.4E-14 T 25-04-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 SMA_RS05100 829778a12bcfd9a687abb1f6e958d6e1 713 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 31 630 2.4E-246 T 25-04-2016 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 SMA_RS05100 829778a12bcfd9a687abb1f6e958d6e1 713 SUPERFAMILY SSF56712 29 608 1.31E-193 T 25-04-2016 IPR023405 DNA topoisomerase, type IA, core domain SMA_RS05100 829778a12bcfd9a687abb1f6e958d6e1 713 SMART SM00493 29 129 7.2E-29 T 25-04-2016 IPR006171 Toprim domain SMA_RS05100 829778a12bcfd9a687abb1f6e958d6e1 713 Hamap MF_00952 DNA topoisomerase 1 [topA]. 29 652 56.109 T 25-04-2016 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 SMA_RS05100 829778a12bcfd9a687abb1f6e958d6e1 713 Pfam PF01751 Toprim domain 31 139 1.7E-30 T 25-04-2016 IPR006171 Toprim domain SMA_RS05100 829778a12bcfd9a687abb1f6e958d6e1 713 SMART SM00436 130 218 8.8E-53 T 25-04-2016 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 SMA_RS05100 829778a12bcfd9a687abb1f6e958d6e1 713 PANTHER PTHR11390 27 708 0.0 T 25-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 SMA_RS05100 829778a12bcfd9a687abb1f6e958d6e1 713 Gene3D G3DSA:2.70.20.10 342 475 1.6E-33 T 25-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 SMA_RS05100 829778a12bcfd9a687abb1f6e958d6e1 713 Gene3D G3DSA:2.70.20.10 210 339 5.1E-30 T 25-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 SMA_RS05100 829778a12bcfd9a687abb1f6e958d6e1 713 SUPERFAMILY SSF57783 592 632 6.63E-13 T 25-04-2016 SMA_RS05100 829778a12bcfd9a687abb1f6e958d6e1 713 SMART SM00437 268 529 2.9E-106 T 25-04-2016 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 SMA_RS07725 03fc496625a808660bbd969f7a700d5f 332 Gene3D G3DSA:3.40.50.2000 128 266 1.4E-15 T 25-04-2016 SMA_RS07725 03fc496625a808660bbd969f7a700d5f 332 Pfam PF13439 Glycosyltransferase Family 4 35 140 1.3E-15 T 25-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain SMA_RS07725 03fc496625a808660bbd969f7a700d5f 332 Pfam PF13692 Glycosyl transferases group 1 162 296 1.2E-9 T 25-04-2016 SMA_RS07725 03fc496625a808660bbd969f7a700d5f 332 PANTHER PTHR12526:SF394 43 331 3.6E-34 T 25-04-2016 SMA_RS07725 03fc496625a808660bbd969f7a700d5f 332 SUPERFAMILY SSF53756 15 329 2.15E-51 T 25-04-2016 SMA_RS07725 03fc496625a808660bbd969f7a700d5f 332 PANTHER PTHR12526 43 331 3.6E-34 T 25-04-2016 SMA_RS09885 e3921f84d70b96e2c4ede872b079a6b1 338 PIRSF PIRSF000114 1 335 6.2E-104 T 25-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 SMA_RS09885 e3921f84d70b96e2c4ede872b079a6b1 338 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 191 212 - T 25-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 SMA_RS09885 e3921f84d70b96e2c4ede872b079a6b1 338 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 136 156 2.7E-43 T 25-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 SMA_RS09885 e3921f84d70b96e2c4ede872b079a6b1 338 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 58 85 2.7E-43 T 25-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 SMA_RS09885 e3921f84d70b96e2c4ede872b079a6b1 338 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 201 225 2.7E-43 T 25-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 SMA_RS09885 e3921f84d70b96e2c4ede872b079a6b1 338 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 176 200 2.7E-43 T 25-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 SMA_RS09885 e3921f84d70b96e2c4ede872b079a6b1 338 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 241 258 2.7E-43 T 25-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 SMA_RS09885 e3921f84d70b96e2c4ede872b079a6b1 338 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 8 25 2.7E-43 T 25-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 SMA_RS09885 e3921f84d70b96e2c4ede872b079a6b1 338 Gene3D G3DSA:3.40.50.720 1 186 2.4E-62 T 25-04-2016 IPR016040 NAD(P)-binding domain SMA_RS09885 e3921f84d70b96e2c4ede872b079a6b1 338 SUPERFAMILY SSF48179 182 334 2.89E-53 T 25-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 SMA_RS09885 e3921f84d70b96e2c4ede872b079a6b1 338 SUPERFAMILY SSF51735 5 182 8.32E-57 T 25-04-2016 IPR016040 NAD(P)-binding domain SMA_RS09885 e3921f84d70b96e2c4ede872b079a6b1 338 Gene3D G3DSA:1.10.1040.10 187 328 2.7E-55 T 25-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 SMA_RS09885 e3921f84d70b96e2c4ede872b079a6b1 338 PANTHER PTHR11728 1 338 1.2E-135 T 25-04-2016 SMA_RS09885 e3921f84d70b96e2c4ede872b079a6b1 338 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 5 163 2.8E-53 T 25-04-2016 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 SMA_RS09885 e3921f84d70b96e2c4ede872b079a6b1 338 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 4 325 36.126 T 25-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 SMA_RS09885 e3921f84d70b96e2c4ede872b079a6b1 338 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 183 320 5.8E-51 T 25-04-2016 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 SMA_RS08445 7cee627a437747409b2ec884c9ab7211 436 Gene3D G3DSA:3.40.50.300 171 357 4.6E-53 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS08445 7cee627a437747409b2ec884c9ab7211 436 Gene3D G3DSA:3.40.50.300 3 170 1.4E-43 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS08445 7cee627a437747409b2ec884c9ab7211 436 Gene3D G3DSA:3.30.300.20 358 436 1.5E-37 T 25-04-2016 IPR015946 K homology domain-like, alpha/beta SMA_RS08445 7cee627a437747409b2ec884c9ab7211 436 PANTHER PTHR11649:SF5 1 436 8.5E-146 T 25-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 SMA_RS08445 7cee627a437747409b2ec884c9ab7211 436 Pfam PF01926 50S ribosome-binding GTPase 6 120 2.3E-26 T 25-04-2016 IPR006073 GTP binding domain GO:0005525 SMA_RS08445 7cee627a437747409b2ec884c9ab7211 436 Pfam PF01926 50S ribosome-binding GTPase 177 295 7.9E-25 T 25-04-2016 IPR006073 GTP binding domain GO:0005525 SMA_RS08445 7cee627a437747409b2ec884c9ab7211 436 PANTHER PTHR11649 1 436 8.5E-146 T 25-04-2016 SMA_RS08445 7cee627a437747409b2ec884c9ab7211 436 SUPERFAMILY SSF52540 138 435 7.9E-66 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS08445 7cee627a437747409b2ec884c9ab7211 436 SUPERFAMILY SSF52540 4 165 2.3E-45 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS08445 7cee627a437747409b2ec884c9ab7211 436 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 353 433 1.2E-32 T 25-04-2016 IPR032859 GTPase Der, C-terminal KH-domain-like SMA_RS08445 7cee627a437747409b2ec884c9ab7211 436 Hamap MF_00195 GTPase Der [der]. 3 436 40.055 T 25-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 SMA_RS08445 7cee627a437747409b2ec884c9ab7211 436 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 175 344 2.1E-25 T 25-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 SMA_RS08445 7cee627a437747409b2ec884c9ab7211 436 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 5 125 4.3E-24 T 25-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 SMA_RS08445 7cee627a437747409b2ec884c9ab7211 436 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 4 432 2.1E-173 T 25-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 SMA_RS08445 7cee627a437747409b2ec884c9ab7211 436 PIRSF PIRSF006485 2 436 3.2E-170 T 25-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 SMA_RS07140 e76b749e380a1e42a3b38f61c388ebf9 432 PANTHER PTHR11902 1 429 1.1E-261 T 25-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 SMA_RS07140 e76b749e380a1e42a3b38f61c388ebf9 432 SMART SM01192 139 429 2.1E-213 T 25-04-2016 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 SMA_RS07140 e76b749e380a1e42a3b38f61c388ebf9 432 Pfam PF03952 Enolase, N-terminal domain 4 134 2.1E-61 T 25-04-2016 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 SMA_RS07140 e76b749e380a1e42a3b38f61c388ebf9 432 Gene3D G3DSA:3.20.20.120 128 428 1.2E-135 T 25-04-2016 IPR029065 Enolase C-terminal domain-like SMA_RS07140 e76b749e380a1e42a3b38f61c388ebf9 432 Hamap MF_00318 Enolase [eno]. 2 415 44.84 T 25-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 SMA_RS07140 e76b749e380a1e42a3b38f61c388ebf9 432 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 429 3.4E-209 T 25-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 SMA_RS07140 e76b749e380a1e42a3b38f61c388ebf9 432 Pfam PF00113 Enolase, C-terminal TIM barrel domain 140 427 1.9E-128 T 25-04-2016 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 SMA_RS07140 e76b749e380a1e42a3b38f61c388ebf9 432 SUPERFAMILY SSF51604 139 430 1.03E-128 T 25-04-2016 IPR029065 Enolase C-terminal domain-like SMA_RS07140 e76b749e380a1e42a3b38f61c388ebf9 432 ProSitePatterns PS00164 Enolase signature. 338 351 - T 25-04-2016 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 SMA_RS07140 e76b749e380a1e42a3b38f61c388ebf9 432 PIRSF PIRSF001400 1 429 1.6E-190 T 25-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 SMA_RS07140 e76b749e380a1e42a3b38f61c388ebf9 432 Gene3D G3DSA:3.30.390.10 4 125 4.5E-57 T 25-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 SMA_RS07140 e76b749e380a1e42a3b38f61c388ebf9 432 SUPERFAMILY SSF54826 3 138 2.36E-58 T 25-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 SMA_RS07140 e76b749e380a1e42a3b38f61c388ebf9 432 PRINTS PR00148 Enolase signature 367 384 1.3E-45 T 25-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 SMA_RS07140 e76b749e380a1e42a3b38f61c388ebf9 432 PRINTS PR00148 Enolase signature 315 326 1.3E-45 T 25-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 SMA_RS07140 e76b749e380a1e42a3b38f61c388ebf9 432 PRINTS PR00148 Enolase signature 338 352 1.3E-45 T 25-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 SMA_RS07140 e76b749e380a1e42a3b38f61c388ebf9 432 PRINTS PR00148 Enolase signature 161 174 1.3E-45 T 25-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 SMA_RS07140 e76b749e380a1e42a3b38f61c388ebf9 432 PRINTS PR00148 Enolase signature 37 51 1.3E-45 T 25-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 SMA_RS07140 e76b749e380a1e42a3b38f61c388ebf9 432 PRINTS PR00148 Enolase signature 107 123 1.3E-45 T 25-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 SMA_RS07140 e76b749e380a1e42a3b38f61c388ebf9 432 SMART SM01193 4 134 3.6E-96 T 25-04-2016 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 SMA_RS04235 a73d39743d4efaa506f9787a672450aa 290 Gene3D G3DSA:1.10.10.10 8 84 9.5E-20 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMA_RS04235 a73d39743d4efaa506f9787a672450aa 290 Gene3D G3DSA:3.40.190.10 86 186 1.8E-20 T 25-04-2016 SMA_RS04235 a73d39743d4efaa506f9787a672450aa 290 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 61 4.6E-16 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMA_RS04235 a73d39743d4efaa506f9787a672450aa 290 PANTHER PTHR30126:SF11 1 275 8.8E-62 T 25-04-2016 SMA_RS04235 a73d39743d4efaa506f9787a672450aa 290 SUPERFAMILY SSF53850 88 283 4.16E-35 T 25-04-2016 SMA_RS04235 a73d39743d4efaa506f9787a672450aa 290 Gene3D G3DSA:3.40.190.10 187 262 1.3E-11 T 25-04-2016 SMA_RS04235 a73d39743d4efaa506f9787a672450aa 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.9E-7 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMA_RS04235 a73d39743d4efaa506f9787a672450aa 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.9E-7 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMA_RS04235 a73d39743d4efaa506f9787a672450aa 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.9E-7 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMA_RS04235 a73d39743d4efaa506f9787a672450aa 290 SUPERFAMILY SSF46785 7 84 1.82E-16 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMA_RS04235 a73d39743d4efaa506f9787a672450aa 290 Pfam PF03466 LysR substrate binding domain 85 278 1.0E-30 T 25-04-2016 IPR005119 LysR, substrate-binding SMA_RS04235 a73d39743d4efaa506f9787a672450aa 290 PANTHER PTHR30126 1 275 8.8E-62 T 25-04-2016 SMA_RS03865 1199b27859ab7911fa8b2fab2a2dff55 252 SUPERFAMILY SSF51735 3 250 9.16E-52 T 25-04-2016 IPR016040 NAD(P)-binding domain SMA_RS03865 1199b27859ab7911fa8b2fab2a2dff55 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 145 164 5.3E-13 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMA_RS03865 1199b27859ab7911fa8b2fab2a2dff55 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 72 83 5.3E-13 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMA_RS03865 1199b27859ab7911fa8b2fab2a2dff55 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 125 133 5.3E-13 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMA_RS03865 1199b27859ab7911fa8b2fab2a2dff55 252 Gene3D G3DSA:3.40.50.720 2 220 4.3E-51 T 25-04-2016 IPR016040 NAD(P)-binding domain SMA_RS03865 1199b27859ab7911fa8b2fab2a2dff55 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 145 164 1.1E-25 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMA_RS03865 1199b27859ab7911fa8b2fab2a2dff55 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 119 135 1.1E-25 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMA_RS03865 1199b27859ab7911fa8b2fab2a2dff55 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 183 1.1E-25 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMA_RS03865 1199b27859ab7911fa8b2fab2a2dff55 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 1.1E-25 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMA_RS03865 1199b27859ab7911fa8b2fab2a2dff55 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 72 83 1.1E-25 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMA_RS03865 1199b27859ab7911fa8b2fab2a2dff55 252 PANTHER PTHR24322:SF509 145 177 1.1E-52 T 25-04-2016 SMA_RS03865 1199b27859ab7911fa8b2fab2a2dff55 252 PANTHER PTHR24322:SF509 6 129 1.1E-52 T 25-04-2016 SMA_RS03865 1199b27859ab7911fa8b2fab2a2dff55 252 PANTHER PTHR24322 145 177 1.1E-52 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMA_RS03865 1199b27859ab7911fa8b2fab2a2dff55 252 PANTHER PTHR24322 6 129 1.1E-52 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMA_RS03865 1199b27859ab7911fa8b2fab2a2dff55 252 Pfam PF00106 short chain dehydrogenase 3 186 3.9E-44 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMA_RS03865 1199b27859ab7911fa8b2fab2a2dff55 252 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 132 160 - T 25-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 SMA_RS05085 5fd5c72e8947b3fafcbc9fa67f5702cc 445 Hamap MF_01037 Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO [trmFO]. 7 445 36.651 T 25-04-2016 IPR004417 Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO GO:0005737|GO:0008033|GO:0047151|GO:0050660 SMA_RS05085 5fd5c72e8947b3fafcbc9fa67f5702cc 445 TIGRFAM TIGR00137 gid_trmFO: tRNA:m(5)U-54 methyltransferase 7 442 3.6E-212 T 25-04-2016 IPR004417 Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO GO:0005737|GO:0008033|GO:0047151|GO:0050660 SMA_RS05085 5fd5c72e8947b3fafcbc9fa67f5702cc 445 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 347 370 - T 25-04-2016 IPR020595 MnmG-related, conserved site SMA_RS05085 5fd5c72e8947b3fafcbc9fa67f5702cc 445 PANTHER PTHR11806 7 444 1.5E-245 T 25-04-2016 SMA_RS05085 5fd5c72e8947b3fafcbc9fa67f5702cc 445 Gene3D G3DSA:3.50.50.60 330 406 1.9E-4 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMA_RS05085 5fd5c72e8947b3fafcbc9fa67f5702cc 445 Gene3D G3DSA:3.50.50.60 188 230 1.9E-4 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMA_RS05085 5fd5c72e8947b3fafcbc9fa67f5702cc 445 SUPERFAMILY SSF51905 9 376 1.3E-24 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMA_RS05085 5fd5c72e8947b3fafcbc9fa67f5702cc 445 Gene3D G3DSA:3.50.50.60 163 166 1.1E-5 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMA_RS05085 5fd5c72e8947b3fafcbc9fa67f5702cc 445 Gene3D G3DSA:3.50.50.60 88 110 1.1E-5 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMA_RS05085 5fd5c72e8947b3fafcbc9fa67f5702cc 445 Gene3D G3DSA:3.50.50.60 288 329 2.0E-8 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMA_RS05085 5fd5c72e8947b3fafcbc9fa67f5702cc 445 Gene3D G3DSA:3.50.50.60 9 79 4.0E-6 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMA_RS05085 5fd5c72e8947b3fafcbc9fa67f5702cc 445 Pfam PF01134 Glucose inhibited division protein A 7 378 4.2E-114 T 25-04-2016 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 SMA_RS05085 5fd5c72e8947b3fafcbc9fa67f5702cc 445 PANTHER PTHR11806:SF2 7 444 1.5E-245 T 25-04-2016 SMA_RS04325 4be1f84c18c9456e9824a8c0e8329f3e 270 PIRSF PIRSF000477 1 270 5.4E-110 T 25-04-2016 IPR011268 Purine nucleoside phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|UniPathway: UPA00606 SMA_RS04325 4be1f84c18c9456e9824a8c0e8329f3e 270 TIGRFAM TIGR01697 PNPH-PUNA-XAPA: inosine/guanosine/xanthosine phosphorylase family 26 267 3.1E-104 T 25-04-2016 IPR011268 Purine nucleoside phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|UniPathway: UPA00606 SMA_RS04325 4be1f84c18c9456e9824a8c0e8329f3e 270 SUPERFAMILY SSF53167 3 270 6.4E-90 T 25-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 SMA_RS04325 4be1f84c18c9456e9824a8c0e8329f3e 270 Gene3D G3DSA:3.40.50.1580 2 269 3.4E-102 T 25-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 SMA_RS04325 4be1f84c18c9456e9824a8c0e8329f3e 270 ProSitePatterns PS01240 Purine and other phosphorylases family 2 signature. 77 118 - T 25-04-2016 IPR018099 Purine phosphorylase, family 2, conserved site GO:0016763 SMA_RS04325 4be1f84c18c9456e9824a8c0e8329f3e 270 TIGRFAM TIGR01700 PNPH: purine nucleoside phosphorylase I, inosine and guanosine-specific 25 267 1.3E-103 T 25-04-2016 IPR011270 Purine nucleoside phosphorylase I, inosine/guanosine-specific GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|UniPathway: UPA00606 SMA_RS04325 4be1f84c18c9456e9824a8c0e8329f3e 270 PANTHER PTHR11904:SF9 1 270 6.3E-129 T 25-04-2016 IPR011268 Purine nucleoside phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|UniPathway: UPA00606 SMA_RS04325 4be1f84c18c9456e9824a8c0e8329f3e 270 Pfam PF01048 Phosphorylase superfamily 25 268 4.4E-50 T 25-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 SMA_RS04325 4be1f84c18c9456e9824a8c0e8329f3e 270 PANTHER PTHR11904 1 270 6.3E-129 T 25-04-2016 IPR001369 PNP/MTAP phosphorylase SMA_RS01090 d5d24c071041a0a2b1bf1962b7ada4b8 159 PANTHER PTHR37297:SF1 9 148 3.4E-34 T 25-04-2016 SMA_RS01090 d5d24c071041a0a2b1bf1962b7ada4b8 159 PIRSF PIRSF005087 8 157 3.9E-40 T 25-04-2016 IPR004465 Ribonucleotide reductase Class Ib, NrdI SMA_RS01090 d5d24c071041a0a2b1bf1962b7ada4b8 159 TIGRFAM TIGR00333 nrdI: nrdI protein 12 152 5.7E-22 T 25-04-2016 IPR004465 Ribonucleotide reductase Class Ib, NrdI SMA_RS01090 d5d24c071041a0a2b1bf1962b7ada4b8 159 SUPERFAMILY SSF52218 8 149 3.31E-20 T 25-04-2016 IPR029039 Flavoprotein-like domain SMA_RS01090 d5d24c071041a0a2b1bf1962b7ada4b8 159 PANTHER PTHR37297 9 148 3.4E-34 T 25-04-2016 SMA_RS01090 d5d24c071041a0a2b1bf1962b7ada4b8 159 Gene3D G3DSA:3.40.50.360 11 151 4.5E-43 T 25-04-2016 IPR029039 Flavoprotein-like domain SMA_RS01090 d5d24c071041a0a2b1bf1962b7ada4b8 159 Pfam PF07972 NrdI Flavodoxin like 12 145 1.2E-40 T 25-04-2016 IPR004465 Ribonucleotide reductase Class Ib, NrdI SMA_RS00405 55e40f5287ddf4dd0bcfbc57bd8f3556 61 Pfam PF00253 Ribosomal protein S14p/S29e 12 60 3.2E-24 T 25-04-2016 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS00405 55e40f5287ddf4dd0bcfbc57bd8f3556 61 ProSitePatterns PS00527 Ribosomal protein S14 signature. 23 45 - T 25-04-2016 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 SMA_RS00405 55e40f5287ddf4dd0bcfbc57bd8f3556 61 Hamap MF_01364_B 30S ribosomal protein S14 type Z [rpsZ]. 1 61 25.372 T 25-04-2016 IPR023053 Ribosomal protein S14, type Z SMA_RS00405 55e40f5287ddf4dd0bcfbc57bd8f3556 61 Gene3D G3DSA:4.10.830.10 2 61 2.4E-27 T 25-04-2016 SMA_RS00405 55e40f5287ddf4dd0bcfbc57bd8f3556 61 PANTHER PTHR19836 15 61 1.1E-34 T 25-04-2016 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS00405 55e40f5287ddf4dd0bcfbc57bd8f3556 61 SUPERFAMILY SSF57716 3 61 2.64E-21 T 25-04-2016 SMA_RS03305 21fa10c76ce9d001d45be323c037b5bb 743 PANTHER PTHR30619 1 743 3.4E-148 T 25-04-2016 SMA_RS03305 21fa10c76ce9d001d45be323c037b5bb 743 Gene3D G3DSA:3.60.15.10 478 724 1.2E-32 T 25-04-2016 IPR001279 Metallo-beta-lactamase SMA_RS03305 21fa10c76ce9d001d45be323c037b5bb 743 SUPERFAMILY SSF56281 484 731 5.42E-45 T 25-04-2016 IPR001279 Metallo-beta-lactamase SMA_RS03305 21fa10c76ce9d001d45be323c037b5bb 743 Pfam PF13567 Domain of unknown function (DUF4131) 27 174 4.3E-7 T 25-04-2016 IPR025405 Domain of unknown function DUF4131 SMA_RS03305 21fa10c76ce9d001d45be323c037b5bb 743 Pfam PF00753 Metallo-beta-lactamase superfamily 491 697 1.3E-12 T 25-04-2016 IPR001279 Metallo-beta-lactamase SMA_RS03305 21fa10c76ce9d001d45be323c037b5bb 743 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 234 384 4.3E-13 T 25-04-2016 IPR004477 ComEC/Rec2-related protein SMA_RS03305 21fa10c76ce9d001d45be323c037b5bb 743 PANTHER PTHR30619:SF2 1 743 3.4E-148 T 25-04-2016 SMA_RS03305 21fa10c76ce9d001d45be323c037b5bb 743 SMART SM00849 492 698 1.0E-9 T 25-04-2016 IPR001279 Metallo-beta-lactamase SMA_RS03305 21fa10c76ce9d001d45be323c037b5bb 743 Pfam PF03772 Competence protein 213 459 1.1E-33 T 25-04-2016 IPR004477 ComEC/Rec2-related protein SMA_RS03305 21fa10c76ce9d001d45be323c037b5bb 743 TIGRFAM TIGR00361 ComEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 75 727 1.6E-81 T 25-04-2016 IPR004797 Competence protein ComEC/Rec2 GO:0016021|GO:0030420 SMA_RS03660 0b83f9065211835ab65b6c7196a5e76f 559 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 232 354 9.3E-9 T 25-04-2016 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 SMA_RS03660 0b83f9065211835ab65b6c7196a5e76f 559 Gene3D G3DSA:1.20.272.10 243 351 3.7E-8 T 25-04-2016 SMA_RS03660 0b83f9065211835ab65b6c7196a5e76f 559 Pfam PF13177 DNA polymerase III, delta subunit 19 177 6.0E-44 T 25-04-2016 SMA_RS03660 0b83f9065211835ab65b6c7196a5e76f 559 SMART SM00382 36 176 1.9E-6 T 25-04-2016 IPR003593 AAA+ ATPase domain SMA_RS03660 0b83f9065211835ab65b6c7196a5e76f 559 SUPERFAMILY SSF48019 247 353 1.28E-12 T 25-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 SMA_RS03660 0b83f9065211835ab65b6c7196a5e76f 559 SUPERFAMILY SSF52540 33 223 1.67E-57 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS03660 0b83f9065211835ab65b6c7196a5e76f 559 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 123 141 1.7E-5 T 25-04-2016 IPR001270 ClpA/B family GO:0005524 SMA_RS03660 0b83f9065211835ab65b6c7196a5e76f 559 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 40 58 1.7E-5 T 25-04-2016 IPR001270 ClpA/B family GO:0005524 SMA_RS03660 0b83f9065211835ab65b6c7196a5e76f 559 PANTHER PTHR11669:SF0 1 507 8.5E-169 T 25-04-2016 SMA_RS03660 0b83f9065211835ab65b6c7196a5e76f 559 PANTHER PTHR11669 1 507 8.5E-169 T 25-04-2016 SMA_RS03660 0b83f9065211835ab65b6c7196a5e76f 559 Gene3D G3DSA:1.10.8.60 166 242 3.2E-30 T 25-04-2016 SMA_RS03660 0b83f9065211835ab65b6c7196a5e76f 559 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 2 351 4.0E-138 T 25-04-2016 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 SMA_RS03660 0b83f9065211835ab65b6c7196a5e76f 559 Gene3D G3DSA:3.40.50.300 14 165 1.7E-66 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS05625 c18355bf876e19df77e04057aa3b73f1 248 SMART SM00382 29 216 7.8E-17 T 25-04-2016 IPR003593 AAA+ ATPase domain SMA_RS05625 c18355bf876e19df77e04057aa3b73f1 248 Gene3D G3DSA:3.40.50.300 3 239 2.2E-83 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS05625 c18355bf876e19df77e04057aa3b73f1 248 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SMA_RS05625 c18355bf876e19df77e04057aa3b73f1 248 PANTHER PTHR24220 6 240 3.7E-115 T 25-04-2016 SMA_RS05625 c18355bf876e19df77e04057aa3b73f1 248 PANTHER PTHR24220:SF327 6 240 3.7E-115 T 25-04-2016 SMA_RS05625 c18355bf876e19df77e04057aa3b73f1 248 PIRSF PIRSF039085 1 243 9.6E-98 T 25-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 SMA_RS05625 c18355bf876e19df77e04057aa3b73f1 248 Pfam PF00005 ABC transporter 20 168 8.8E-36 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMA_RS05625 c18355bf876e19df77e04057aa3b73f1 248 SUPERFAMILY SSF52540 4 238 2.54E-75 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS00830 1d5e626456a4a2ab9366d13381174754 268 Gene3D G3DSA:3.30.1240.10 83 177 2.2E-21 T 25-04-2016 SMA_RS00830 1d5e626456a4a2ab9366d13381174754 268 Pfam PF08282 haloacid dehalogenase-like hydrolase 5 259 1.0E-61 T 25-04-2016 IPR023214 HAD-like domain SMA_RS00830 1d5e626456a4a2ab9366d13381174754 268 PANTHER PTHR10000:SF8 1 265 4.5E-62 T 25-04-2016 SMA_RS00830 1d5e626456a4a2ab9366d13381174754 268 Gene3D G3DSA:3.40.50.1000 178 263 2.4E-48 T 25-04-2016 IPR023214 HAD-like domain SMA_RS00830 1d5e626456a4a2ab9366d13381174754 268 Gene3D G3DSA:3.40.50.1000 1 72 2.4E-48 T 25-04-2016 IPR023214 HAD-like domain SMA_RS00830 1d5e626456a4a2ab9366d13381174754 268 SUPERFAMILY SSF56784 1 262 7.46E-68 T 25-04-2016 IPR023214 HAD-like domain SMA_RS00830 1d5e626456a4a2ab9366d13381174754 268 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 4 259 6.5E-56 T 25-04-2016 IPR000150 Cof protein GO:0016787 SMA_RS00830 1d5e626456a4a2ab9366d13381174754 268 PANTHER PTHR10000 1 265 4.5E-62 T 25-04-2016 SMA_RS00830 1d5e626456a4a2ab9366d13381174754 268 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 4 232 9.4E-33 T 25-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 SMA_RS07730 ee1332b3225bcc7fcf5b3a20760baae8 333 Pfam PF13377 Periplasmic binding protein-like domain 179 332 1.0E-24 T 25-04-2016 SMA_RS07730 ee1332b3225bcc7fcf5b3a20760baae8 333 SMART SM00354 6 76 1.2E-37 T 25-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SMA_RS07730 ee1332b3225bcc7fcf5b3a20760baae8 333 PANTHER PTHR30146:SF4 6 333 1.0E-118 T 25-04-2016 SMA_RS07730 ee1332b3225bcc7fcf5b3a20760baae8 333 TIGRFAM TIGR01481 ccpA: catabolite control protein A 5 333 4.1E-164 T 25-04-2016 IPR006377 Catabolite control protein A GO:0006355 SMA_RS07730 ee1332b3225bcc7fcf5b3a20760baae8 333 Gene3D G3DSA:1.10.260.40 7 58 1.3E-27 T 25-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SMA_RS07730 ee1332b3225bcc7fcf5b3a20760baae8 333 PANTHER PTHR30146 6 333 1.0E-118 T 25-04-2016 SMA_RS07730 ee1332b3225bcc7fcf5b3a20760baae8 333 SUPERFAMILY SSF47413 6 64 1.61E-19 T 25-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SMA_RS07730 ee1332b3225bcc7fcf5b3a20760baae8 333 Gene3D G3DSA:3.40.50.2300 59 177 8.1E-42 T 25-04-2016 SMA_RS07730 ee1332b3225bcc7fcf5b3a20760baae8 333 Pfam PF00356 Bacterial regulatory proteins, lacI family 8 53 7.1E-22 T 25-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SMA_RS07730 ee1332b3225bcc7fcf5b3a20760baae8 333 SUPERFAMILY SSF53822 66 332 8.83E-68 T 25-04-2016 IPR028082 Periplasmic binding protein-like I SMA_RS07730 ee1332b3225bcc7fcf5b3a20760baae8 333 ProSitePatterns PS00356 LacI-type HTH domain signature. 9 27 - T 25-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SMA_RS07730 ee1332b3225bcc7fcf5b3a20760baae8 333 Gene3D G3DSA:3.40.50.2300 178 313 6.6E-33 T 25-04-2016 SMA_RS07730 ee1332b3225bcc7fcf5b3a20760baae8 333 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 8 18 8.1E-7 T 25-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SMA_RS07730 ee1332b3225bcc7fcf5b3a20760baae8 333 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 18 28 8.1E-7 T 25-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SMA_RS08065 279cabfa182e1f92d69e631bfbb48436 211 ProSitePatterns PS01331 Thymidylate kinase signature. 94 106 - T 25-04-2016 IPR018095 Thymidylate kinase, conserved site GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 SMA_RS08065 279cabfa182e1f92d69e631bfbb48436 211 Gene3D G3DSA:3.40.50.300 4 207 3.2E-66 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS08065 279cabfa182e1f92d69e631bfbb48436 211 Hamap MF_00165 Thymidylate kinase [tmk]. 5 207 29.854 T 25-04-2016 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 SMA_RS08065 279cabfa182e1f92d69e631bfbb48436 211 SUPERFAMILY SSF52540 1 205 2.35E-52 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS08065 279cabfa182e1f92d69e631bfbb48436 211 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 1 196 7.7E-59 T 25-04-2016 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 SMA_RS08065 279cabfa182e1f92d69e631bfbb48436 211 Pfam PF02223 Thymidylate kinase 9 198 1.3E-53 T 25-04-2016 SMA_RS08065 279cabfa182e1f92d69e631bfbb48436 211 PANTHER PTHR10344 1 211 1.3E-64 T 25-04-2016 SMA_RS02850 2bcc18e77f21f15d00f66ec56321d1f8 441 PANTHER PTHR11575 4 441 1.5E-91 T 25-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 SMA_RS02850 2bcc18e77f21f15d00f66ec56321d1f8 441 SUPERFAMILY SSF55816 288 441 1.16E-9 T 25-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 SMA_RS02850 2bcc18e77f21f15d00f66ec56321d1f8 441 Gene3D G3DSA:3.90.780.10 287 440 6.1E-6 T 25-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 SMA_RS02850 2bcc18e77f21f15d00f66ec56321d1f8 441 Pfam PF00149 Calcineurin-like phosphoesterase 5 201 8.1E-13 T 25-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 SMA_RS02850 2bcc18e77f21f15d00f66ec56321d1f8 441 Gene3D G3DSA:3.60.21.10 4 271 9.3E-53 T 25-04-2016 IPR029052 Metallo-dependent phosphatase-like SMA_RS02850 2bcc18e77f21f15d00f66ec56321d1f8 441 PRINTS PR01607 Apyrase family signature 212 232 5.4E-13 T 25-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 SMA_RS02850 2bcc18e77f21f15d00f66ec56321d1f8 441 PRINTS PR01607 Apyrase family signature 165 182 5.4E-13 T 25-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 SMA_RS02850 2bcc18e77f21f15d00f66ec56321d1f8 441 PRINTS PR01607 Apyrase family signature 3 21 5.4E-13 T 25-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 SMA_RS02850 2bcc18e77f21f15d00f66ec56321d1f8 441 PRINTS PR01607 Apyrase family signature 184 207 5.4E-13 T 25-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 SMA_RS02850 2bcc18e77f21f15d00f66ec56321d1f8 441 PIRSF PIRSF036361 1 441 1.2E-165 T 25-04-2016 IPR011240 Phosphoesterase-related protein YunD SMA_RS02850 2bcc18e77f21f15d00f66ec56321d1f8 441 PANTHER PTHR11575:SF23 4 441 1.5E-91 T 25-04-2016 SMA_RS02850 2bcc18e77f21f15d00f66ec56321d1f8 441 SUPERFAMILY SSF56300 4 271 4.16E-60 T 25-04-2016 IPR029052 Metallo-dependent phosphatase-like SMA_RS04395 cca6fc889ca1560d025105b391902714 389 Pfam PF00534 Glycosyl transferases group 1 208 357 1.7E-6 T 25-04-2016 IPR001296 Glycosyl transferase, family 1 SMA_RS04395 cca6fc889ca1560d025105b391902714 389 Pfam PF09314 Domain of unknown function (DUF1972) 1 192 2.3E-91 T 25-04-2016 IPR015393 Domain of unknown function DUF1972 SMA_RS04395 cca6fc889ca1560d025105b391902714 389 SUPERFAMILY SSF53756 34 388 2.72E-36 T 25-04-2016 SMA_RS08325 4ea6406c39ac80d522f2bbef09cbce3e 338 Gene3D G3DSA:3.90.950.10 134 331 1.2E-74 T 25-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like SMA_RS08325 4ea6406c39ac80d522f2bbef09cbce3e 338 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 140 331 4.1E-56 T 25-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 SMA_RS08325 4ea6406c39ac80d522f2bbef09cbce3e 338 PANTHER PTHR11067 134 331 1.3E-69 T 25-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 SMA_RS08325 4ea6406c39ac80d522f2bbef09cbce3e 338 SUPERFAMILY SSF52972 139 331 8.63E-64 T 25-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like SMA_RS08325 4ea6406c39ac80d522f2bbef09cbce3e 338 PANTHER PTHR11067:SF9 134 331 1.3E-69 T 25-04-2016 SMA_RS08325 4ea6406c39ac80d522f2bbef09cbce3e 338 Pfam PF01725 Ham1 family 141 329 1.3E-50 T 25-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 SMA_RS08325 4ea6406c39ac80d522f2bbef09cbce3e 338 Hamap MF_01405 dITP/XTP pyrophosphatase [rdgB]. 139 333 47.74 T 25-04-2016 IPR020922 Non-canonical purine NTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 SMA_RS06320 1de9189d14d1a0734de0c03cb50699a7 289 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 7 284 33.626 T 25-04-2016 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 SMA_RS06320 1de9189d14d1a0734de0c03cb50699a7 289 PANTHER PTHR21089 1 286 2.5E-89 T 25-04-2016 SMA_RS06320 1de9189d14d1a0734de0c03cb50699a7 289 Gene3D G3DSA:3.40.50.720 112 287 6.6E-45 T 25-04-2016 IPR016040 NAD(P)-binding domain SMA_RS06320 1de9189d14d1a0734de0c03cb50699a7 289 SUPERFAMILY SSF51735 107 285 5.6E-33 T 25-04-2016 IPR016040 NAD(P)-binding domain SMA_RS06320 1de9189d14d1a0734de0c03cb50699a7 289 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 12 94 1.0E-27 T 25-04-2016 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 SMA_RS06320 1de9189d14d1a0734de0c03cb50699a7 289 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 9 284 2.5E-65 T 25-04-2016 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 SMA_RS06320 1de9189d14d1a0734de0c03cb50699a7 289 Gene3D G3DSA:3.40.192.10 2 111 1.7E-41 T 25-04-2016 SMA_RS06320 1de9189d14d1a0734de0c03cb50699a7 289 SUPERFAMILY SSF53223 1 106 1.04E-35 T 25-04-2016 SMA_RS06200 f3f4a226cd7551fa69226e6996de8b6e 236 SUPERFAMILY SSF52540 8 229 1.3E-74 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS06200 f3f4a226cd7551fa69226e6996de8b6e 236 SMART SM00382 37 224 1.3E-18 T 25-04-2016 IPR003593 AAA+ ATPase domain SMA_RS06200 f3f4a226cd7551fa69226e6996de8b6e 236 Pfam PF00005 ABC transporter 28 176 4.2E-33 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMA_RS06200 f3f4a226cd7551fa69226e6996de8b6e 236 PANTHER PTHR24220 10 230 4.4E-120 T 25-04-2016 SMA_RS06200 f3f4a226cd7551fa69226e6996de8b6e 236 PANTHER PTHR24220:SF578 10 230 4.4E-120 T 25-04-2016 SMA_RS06200 f3f4a226cd7551fa69226e6996de8b6e 236 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SMA_RS06200 f3f4a226cd7551fa69226e6996de8b6e 236 Gene3D G3DSA:3.40.50.300 7 229 1.1E-72 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS03625 1decf909896242a4cfa6fc63e55a5ac6 206 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 7 192 5.2E-46 T 25-04-2016 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0008152|GO:0016301 SMA_RS03625 1decf909896242a4cfa6fc63e55a5ac6 206 Gene3D G3DSA:3.40.50.300 4 205 1.1E-68 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS03625 1decf909896242a4cfa6fc63e55a5ac6 206 TIGRFAM TIGR00235 udk: uridine kinase 3 206 8.1E-89 T 25-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 SMA_RS03625 1decf909896242a4cfa6fc63e55a5ac6 206 PRINTS PR00988 Uridine kinase signature 150 161 9.2E-39 T 25-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 SMA_RS03625 1decf909896242a4cfa6fc63e55a5ac6 206 PRINTS PR00988 Uridine kinase signature 136 146 9.2E-39 T 25-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 SMA_RS03625 1decf909896242a4cfa6fc63e55a5ac6 206 PRINTS PR00988 Uridine kinase signature 35 46 9.2E-39 T 25-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 SMA_RS03625 1decf909896242a4cfa6fc63e55a5ac6 206 PRINTS PR00988 Uridine kinase signature 172 185 9.2E-39 T 25-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 SMA_RS03625 1decf909896242a4cfa6fc63e55a5ac6 206 PRINTS PR00988 Uridine kinase signature 80 95 9.2E-39 T 25-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 SMA_RS03625 1decf909896242a4cfa6fc63e55a5ac6 206 PRINTS PR00988 Uridine kinase signature 5 22 9.2E-39 T 25-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 SMA_RS03625 1decf909896242a4cfa6fc63e55a5ac6 206 Hamap MF_00551 Uridine kinase [udk]. 2 206 42.134 T 25-04-2016 IPR026008 Uridine kinase GO:0004849|GO:0005524|GO:0016773 KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 SMA_RS03625 1decf909896242a4cfa6fc63e55a5ac6 206 SUPERFAMILY SSF52540 3 198 1.15E-47 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS03625 1decf909896242a4cfa6fc63e55a5ac6 206 PANTHER PTHR10285 3 206 5.6E-90 T 25-04-2016 SMA_RS09840 0b9a0d57364dd60f9d61296b31bac3c9 226 Pfam PF13610 DDE domain 72 203 1.9E-38 T 25-04-2016 IPR032874 DDE domain SMA_RS09840 0b9a0d57364dd60f9d61296b31bac3c9 226 SUPERFAMILY SSF53098 69 185 8.34E-7 T 25-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMA_RS09840 0b9a0d57364dd60f9d61296b31bac3c9 226 PANTHER PTHR35528:SF1 1 176 1.2E-41 T 25-04-2016 SMA_RS09840 0b9a0d57364dd60f9d61296b31bac3c9 226 Gene3D G3DSA:3.30.420.10 68 176 3.7E-4 T 25-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMA_RS09840 0b9a0d57364dd60f9d61296b31bac3c9 226 PANTHER PTHR35528 1 176 1.2E-41 T 25-04-2016 SMA_RS08870 9974b27655034cf9d29e7c2458e3a1b5 86 Pfam PF01527 Transposase 3 69 2.2E-10 T 25-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 SMA_RS08870 9974b27655034cf9d29e7c2458e3a1b5 86 Gene3D G3DSA:1.10.10.60 6 78 1.3E-15 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMA_RS08870 9974b27655034cf9d29e7c2458e3a1b5 86 SUPERFAMILY SSF46689 2 83 5.2E-17 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMA_RS05010 cc533ee56749b8008efb15ba5638583d 193 Gene3D G3DSA:3.40.50.10490 9 186 4.9E-21 T 25-04-2016 SMA_RS05010 cc533ee56749b8008efb15ba5638583d 193 SUPERFAMILY SSF53697 8 177 4.23E-22 T 25-04-2016 SMA_RS05010 cc533ee56749b8008efb15ba5638583d 193 Pfam PF01380 SIS domain 40 165 4.9E-11 T 25-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 SMA_RS02110 b936031ea9847fb08ade7d50a86fe051 330 SUPERFAMILY SSF52728 169 328 9.16E-54 T 25-04-2016 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 SMA_RS02110 b936031ea9847fb08ade7d50a86fe051 330 PANTHER PTHR33799:SF7 3 330 6.6E-210 T 25-04-2016 SMA_RS02110 b936031ea9847fb08ade7d50a86fe051 330 PANTHER PTHR33799 3 330 6.6E-210 T 25-04-2016 SMA_RS02110 b936031ea9847fb08ade7d50a86fe051 330 SUPERFAMILY SSF53062 2 137 2.35E-36 T 25-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 SMA_RS02110 b936031ea9847fb08ade7d50a86fe051 330 Gene3D G3DSA:3.40.50.510 2 143 1.7E-50 T 25-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 SMA_RS02110 b936031ea9847fb08ade7d50a86fe051 330 Pfam PF03610 PTS system fructose IIA component 4 122 9.2E-36 T 25-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 SMA_RS02110 b936031ea9847fb08ade7d50a86fe051 330 Pfam PF03830 PTS system sorbose subfamily IIB component 170 317 1.1E-50 T 25-04-2016 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 SMA_RS02110 b936031ea9847fb08ade7d50a86fe051 330 Gene3D G3DSA:3.40.35.10 169 328 6.1E-64 T 25-04-2016 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 SMA_RS09065 156c82c7c568bf094689bcbd8364528e 281 SUPERFAMILY SSF161098 15 272 1.96E-35 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SMA_RS09065 156c82c7c568bf094689bcbd8364528e 281 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 80 278 4.6E-21 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SMA_RS09065 156c82c7c568bf094689bcbd8364528e 281 Gene3D G3DSA:1.10.3720.10 9 279 1.9E-38 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SMA_RS09065 156c82c7c568bf094689bcbd8364528e 281 PANTHER PTHR30425:SF6 2 281 2.2E-92 T 25-04-2016 SMA_RS09065 156c82c7c568bf094689bcbd8364528e 281 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 6 278 4.4E-85 T 25-04-2016 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 SMA_RS09065 156c82c7c568bf094689bcbd8364528e 281 PANTHER PTHR30425 2 281 2.2E-92 T 25-04-2016 SMA_RS08995 abbefe50b34ef882d3211a88ee28370f 365 Gene3D G3DSA:3.30.70.270 79 177 9.2E-34 T 25-04-2016 SMA_RS08995 abbefe50b34ef882d3211a88ee28370f 365 SUPERFAMILY SSF100879 251 351 9.58E-25 T 25-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SMA_RS08995 abbefe50b34ef882d3211a88ee28370f 365 Gene3D G3DSA:3.30.1490.100 254 356 4.4E-28 T 25-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SMA_RS08995 abbefe50b34ef882d3211a88ee28370f 365 Hamap MF_01113 DNA polymerase IV [dinB]. 11 362 38.316 T 25-04-2016 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SMA_RS08995 abbefe50b34ef882d3211a88ee28370f 365 Pfam PF00817 impB/mucB/samB family 17 167 2.8E-51 T 25-04-2016 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SMA_RS08995 abbefe50b34ef882d3211a88ee28370f 365 Gene3D G3DSA:1.10.150.20 179 248 1.5E-23 T 25-04-2016 SMA_RS08995 abbefe50b34ef882d3211a88ee28370f 365 Pfam PF11799 impB/mucB/samB family C-terminal domain 249 356 8.9E-19 T 25-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SMA_RS08995 abbefe50b34ef882d3211a88ee28370f 365 SUPERFAMILY SSF56672 5 247 6.67E-94 T 25-04-2016 SMA_RS08995 abbefe50b34ef882d3211a88ee28370f 365 PANTHER PTHR11076 1 355 1.9E-139 T 25-04-2016 SMA_RS08995 abbefe50b34ef882d3211a88ee28370f 365 Pfam PF11798 IMS family HHH motif 179 210 1.9E-8 T 25-04-2016 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SMA_RS05870 9d7cb06270552c5e39fdae996ee16cfb 292 Gene3D G3DSA:3.30.70.890 168 288 6.2E-35 T 25-04-2016 IPR013750 GHMP kinase, C-terminal domain SMA_RS05870 9d7cb06270552c5e39fdae996ee16cfb 292 PANTHER PTHR10457 13 281 5.0E-43 T 25-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 SMA_RS05870 9d7cb06270552c5e39fdae996ee16cfb 292 SUPERFAMILY SSF54211 8 175 2.73E-30 T 25-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SMA_RS05870 9d7cb06270552c5e39fdae996ee16cfb 292 SUPERFAMILY SSF55060 160 290 1.13E-30 T 25-04-2016 IPR013750 GHMP kinase, C-terminal domain SMA_RS05870 9d7cb06270552c5e39fdae996ee16cfb 292 Pfam PF00288 GHMP kinases N terminal domain 78 140 1.4E-12 T 25-04-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 SMA_RS05870 9d7cb06270552c5e39fdae996ee16cfb 292 PRINTS PR00959 Mevalonate kinase family signature 250 267 9.2E-18 T 25-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 SMA_RS05870 9d7cb06270552c5e39fdae996ee16cfb 292 PRINTS PR00959 Mevalonate kinase family signature 10 34 9.2E-18 T 25-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 SMA_RS05870 9d7cb06270552c5e39fdae996ee16cfb 292 PRINTS PR00959 Mevalonate kinase family signature 81 103 9.2E-18 T 25-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 SMA_RS05870 9d7cb06270552c5e39fdae996ee16cfb 292 TIGRFAM TIGR00549 mevalon_kin: mevalonate kinase 10 265 6.0E-68 T 25-04-2016 IPR006205 Mevalonate kinase GO:0004496|GO:0005524|GO:0005737|GO:0008299 KEGG: 00900+2.7.1.36|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-922|UniPathway: UPA00057 SMA_RS05870 9d7cb06270552c5e39fdae996ee16cfb 292 Pfam PF08544 GHMP kinases C terminal 205 283 3.8E-16 T 25-04-2016 IPR013750 GHMP kinase, C-terminal domain SMA_RS05870 9d7cb06270552c5e39fdae996ee16cfb 292 Gene3D G3DSA:3.30.230.10 4 54 1.1E-10 T 25-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SMA_RS05870 9d7cb06270552c5e39fdae996ee16cfb 292 Gene3D G3DSA:3.30.230.10 62 167 5.0E-24 T 25-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SMA_RS09795 930ec7b92df4d0ad8b5f4f3f9421f878 283 Pfam PF00005 ABC transporter 19 148 8.1E-31 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMA_RS09795 930ec7b92df4d0ad8b5f4f3f9421f878 283 SMART SM00382 27 199 5.3E-14 T 25-04-2016 IPR003593 AAA+ ATPase domain SMA_RS09795 930ec7b92df4d0ad8b5f4f3f9421f878 283 Gene3D G3DSA:3.40.50.300 2 220 1.4E-66 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS09795 930ec7b92df4d0ad8b5f4f3f9421f878 283 ProSitePatterns PS00211 ABC transporters family signature. 121 135 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SMA_RS09795 930ec7b92df4d0ad8b5f4f3f9421f878 283 SUPERFAMILY SSF52540 2 211 7.17E-61 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS09795 930ec7b92df4d0ad8b5f4f3f9421f878 283 PANTHER PTHR24220 4 215 2.7E-80 T 25-04-2016 SMA_RS06355 b15dfb9e5a5b4bdc49879c769b9111c2 119 Pfam PF00453 Ribosomal protein L20 3 109 2.7E-49 T 25-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 SMA_RS06355 b15dfb9e5a5b4bdc49879c769b9111c2 119 PRINTS PR00062 Ribosomal protein L20 signature 42 71 3.7E-41 T 25-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 SMA_RS06355 b15dfb9e5a5b4bdc49879c769b9111c2 119 PRINTS PR00062 Ribosomal protein L20 signature 12 41 3.7E-41 T 25-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 SMA_RS06355 b15dfb9e5a5b4bdc49879c769b9111c2 119 PRINTS PR00062 Ribosomal protein L20 signature 75 101 3.7E-41 T 25-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 SMA_RS06355 b15dfb9e5a5b4bdc49879c769b9111c2 119 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 30.398 T 25-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 SMA_RS06355 b15dfb9e5a5b4bdc49879c769b9111c2 119 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 25-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 SMA_RS06355 b15dfb9e5a5b4bdc49879c769b9111c2 119 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 23 70 1.0E-13 T 25-04-2016 SMA_RS06355 b15dfb9e5a5b4bdc49879c769b9111c2 119 PANTHER PTHR10986 2 117 2.2E-64 T 25-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 SMA_RS06355 b15dfb9e5a5b4bdc49879c769b9111c2 119 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 1.8E-50 T 25-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 SMA_RS06355 b15dfb9e5a5b4bdc49879c769b9111c2 119 SUPERFAMILY SSF74731 3 116 2.35E-49 T 25-04-2016 SMA_RS06355 b15dfb9e5a5b4bdc49879c769b9111c2 119 Gene3D G3DSA:1.10.1900.20 55 117 5.0E-32 T 25-04-2016 SMA_RS06355 b15dfb9e5a5b4bdc49879c769b9111c2 119 PANTHER PTHR10986:SF12 2 117 2.2E-64 T 25-04-2016 SMA_RS06720 97e62acd0944463a146de14300ccd009 73 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 7 63 3.7E-9 T 25-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SMA_RS06720 97e62acd0944463a146de14300ccd009 73 Gene3D G3DSA:1.10.260.40 6 65 7.1E-7 T 25-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SMA_RS06720 97e62acd0944463a146de14300ccd009 73 SUPERFAMILY SSF47413 5 63 2.96E-5 T 25-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SMA_RS09335 94aeae6729e10bdd677027cb5658e40b 464 Pfam PF13437 HlyD family secretion protein 325 438 2.5E-14 T 25-04-2016 SMA_RS09335 94aeae6729e10bdd677027cb5658e40b 464 TIGRFAM TIGR01000 bacteriocin_acc: bacteriocin secretion accessory protein 1 462 1.5E-127 T 25-04-2016 IPR005696 Mesentericin y105 secretion protein GO:0005215|GO:0006810 SMA_RS09335 94aeae6729e10bdd677027cb5658e40b 464 PANTHER PTHR32347 306 464 6.0E-12 T 25-04-2016 SMA_RS09335 94aeae6729e10bdd677027cb5658e40b 464 PANTHER PTHR32347 23 228 6.0E-12 T 25-04-2016 SMA_RS06350 c9a236449b1f6de80fddab8ae9357464 425 PANTHER PTHR19446 66 312 6.6E-67 T 25-04-2016 SMA_RS06350 c9a236449b1f6de80fddab8ae9357464 425 TIGRFAM TIGR04416 group_II_RT_mat: group II intron reverse transcriptase/maturase 11 358 3.6E-118 T 25-04-2016 IPR030931 Group II intron reverse transcriptase/maturase SMA_RS06350 c9a236449b1f6de80fddab8ae9357464 425 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 68 274 6.4E-44 T 25-04-2016 IPR000477 Reverse transcriptase domain SMA_RS06350 c9a236449b1f6de80fddab8ae9357464 425 PANTHER PTHR19446:SF107 66 312 6.6E-67 T 25-04-2016 SMA_RS06350 c9a236449b1f6de80fddab8ae9357464 425 Pfam PF08388 Group II intron, maturase-specific domain 295 365 5.2E-16 T 25-04-2016 IPR013597 Group II intron, maturase-specific SMA_RS06350 c9a236449b1f6de80fddab8ae9357464 425 SUPERFAMILY SSF56672 20 351 7.63E-49 T 25-04-2016 SMA_RS08615 3badb488f0353ac2e3c417d4205a2a57 245 Pfam PF13649 Methyltransferase domain 40 134 3.3E-18 T 25-04-2016 SMA_RS08615 3badb488f0353ac2e3c417d4205a2a57 245 PANTHER PTHR10108:SF872 5 166 9.1E-50 T 25-04-2016 SMA_RS08615 3badb488f0353ac2e3c417d4205a2a57 245 PANTHER PTHR10108:SF872 192 242 9.1E-50 T 25-04-2016 SMA_RS08615 3badb488f0353ac2e3c417d4205a2a57 245 SUPERFAMILY SSF53335 4 245 1.49E-51 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMA_RS08615 3badb488f0353ac2e3c417d4205a2a57 245 Gene3D G3DSA:3.40.50.150 2 245 2.3E-46 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMA_RS08615 3badb488f0353ac2e3c417d4205a2a57 245 PANTHER PTHR10108 5 166 9.1E-50 T 25-04-2016 SMA_RS08615 3badb488f0353ac2e3c417d4205a2a57 245 PANTHER PTHR10108 192 242 9.1E-50 T 25-04-2016 SMA_RS02460 3cbdaf027e89e56a67a09ad8079ca948 94 Gene3D G3DSA:1.10.10.10 9 59 3.1E-9 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMA_RS02460 3cbdaf027e89e56a67a09ad8079ca948 94 Pfam PF13518 Helix-turn-helix domain 11 59 1.2E-7 T 25-04-2016 SMA_RS02460 3cbdaf027e89e56a67a09ad8079ca948 94 SUPERFAMILY SSF48295 1 59 6.28E-13 T 25-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 SMA_RS08515 0abc78c7b03bc2843f345f08e05cf7e4 182 Pfam PF07155 ECF-type riboflavin transporter, S component 4 171 2.3E-55 T 25-04-2016 IPR009825 ECF transporter, substrate-specific component-like GO:0016020 SMA_RS08515 0abc78c7b03bc2843f345f08e05cf7e4 182 Hamap MF_01572 UPF0397 protein . 2 182 28.057 T 25-04-2016 IPR022914 Protein of unknown function UPF0397 SMA_RS08515 0abc78c7b03bc2843f345f08e05cf7e4 182 PANTHER PTHR37815 1 182 5.5E-74 T 25-04-2016 SMA_RS08515 0abc78c7b03bc2843f345f08e05cf7e4 182 PANTHER PTHR37815:SF2 1 182 5.5E-74 T 25-04-2016 SMA_RS00350 3f4f0779392485a4f0efca3f52e993d5 98 SUPERFAMILY SSF54189 1 91 1.73E-28 T 25-04-2016 IPR012678 Ribosomal protein L23/L15e core domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS00350 3f4f0779392485a4f0efca3f52e993d5 98 PANTHER PTHR11620 1 93 3.6E-28 T 25-04-2016 SMA_RS00350 3f4f0779392485a4f0efca3f52e993d5 98 Pfam PF00276 Ribosomal protein L23 5 88 8.3E-29 T 25-04-2016 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 SMA_RS00350 3f4f0779392485a4f0efca3f52e993d5 98 Gene3D G3DSA:3.30.70.330 1 93 1.1E-31 T 25-04-2016 IPR012677 Nucleotide-binding alpha-beta plait domain GO:0000166 SMA_RS00350 3f4f0779392485a4f0efca3f52e993d5 98 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 4 95 21.245 T 25-04-2016 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 SMA_RS00350 3f4f0779392485a4f0efca3f52e993d5 98 ProSitePatterns PS00050 Ribosomal protein L23 signature. 77 92 - T 25-04-2016 IPR001014 Ribosomal protein L23/L25, conserved site SMA_RS07600 281b5b7316542cacf5837e93329e0a4c 477 SMART SM00382 272 462 3.1E-6 T 25-04-2016 IPR003593 AAA+ ATPase domain SMA_RS07600 281b5b7316542cacf5837e93329e0a4c 477 Gene3D G3DSA:3.40.50.300 286 474 5.9E-77 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS07600 281b5b7316542cacf5837e93329e0a4c 477 PANTHER PTHR11564 166 474 6.0E-130 T 25-04-2016 SMA_RS07600 281b5b7316542cacf5837e93329e0a4c 477 SMART SM00962 273 474 1.2E-113 T 25-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 SMA_RS07600 281b5b7316542cacf5837e93329e0a4c 477 SMART SM00963 176 257 5.3E-20 T 25-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 SMA_RS07600 281b5b7316542cacf5837e93329e0a4c 477 SUPERFAMILY SSF47364 174 251 1.09E-17 T 25-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 SMA_RS07600 281b5b7316542cacf5837e93329e0a4c 477 Gene3D G3DSA:1.20.120.140 201 285 8.9E-26 T 25-04-2016 SMA_RS07600 281b5b7316542cacf5837e93329e0a4c 477 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 447 460 - T 25-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 SMA_RS07600 281b5b7316542cacf5837e93329e0a4c 477 SUPERFAMILY SSF52540 274 472 4.11E-49 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS07600 281b5b7316542cacf5837e93329e0a4c 477 PANTHER PTHR11564:SF16 166 474 6.0E-130 T 25-04-2016 SMA_RS07600 281b5b7316542cacf5837e93329e0a4c 477 Pfam PF02881 SRP54-type protein, helical bundle domain 188 253 3.1E-11 T 25-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 SMA_RS07600 281b5b7316542cacf5837e93329e0a4c 477 Pfam PF00448 SRP54-type protein, GTPase domain 274 473 1.1E-76 T 25-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 SMA_RS07600 281b5b7316542cacf5837e93329e0a4c 477 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 200 474 62.626 T 25-04-2016 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 SMA_RS07600 281b5b7316542cacf5837e93329e0a4c 477 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 201 473 2.0E-108 T 25-04-2016 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 SMA_RS09820 0a27172f2bde10338601b49aa9f4a2bc 396 SUPERFAMILY SSF52402 3 163 5.29E-46 T 25-04-2016 SMA_RS09820 0a27172f2bde10338601b49aa9f4a2bc 396 Hamap MF_00005 Argininosuccinate synthase [argG]. 3 395 54.029 T 25-04-2016 IPR023434 Argininosuccinate synthase, type 1 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 SMA_RS09820 0a27172f2bde10338601b49aa9f4a2bc 396 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 9 17 - T 25-04-2016 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 SMA_RS09820 0a27172f2bde10338601b49aa9f4a2bc 396 SUPERFAMILY SSF69864 169 395 2.09E-90 T 25-04-2016 SMA_RS09820 0a27172f2bde10338601b49aa9f4a2bc 396 PANTHER PTHR11587 1 396 5.4E-216 T 25-04-2016 SMA_RS09820 0a27172f2bde10338601b49aa9f4a2bc 396 Pfam PF00764 Arginosuccinate synthase 7 389 8.4E-172 T 25-04-2016 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 SMA_RS09820 0a27172f2bde10338601b49aa9f4a2bc 396 Gene3D G3DSA:3.90.1260.10 172 395 1.7E-89 T 25-04-2016 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 SMA_RS09820 0a27172f2bde10338601b49aa9f4a2bc 396 TIGRFAM TIGR00032 argG: argininosuccinate synthase 5 393 9.0E-161 T 25-04-2016 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 SMA_RS09820 0a27172f2bde10338601b49aa9f4a2bc 396 PANTHER PTHR11587:SF2 1 396 5.4E-216 T 25-04-2016 SMA_RS09820 0a27172f2bde10338601b49aa9f4a2bc 396 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 115 126 - T 25-04-2016 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 SMA_RS09820 0a27172f2bde10338601b49aa9f4a2bc 396 Gene3D G3DSA:3.40.50.620 4 169 3.7E-59 T 25-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SMA_RS08665 3598035dd2fccfe7151958d5b7772e2b 480 TIGRFAM TIGR00133 gatB: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit 1 474 9.2E-165 T 25-04-2016 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 SMA_RS08665 3598035dd2fccfe7151958d5b7772e2b 480 Hamap MF_00121 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B [gatB]. 2 475 37.04 T 25-04-2016 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 SMA_RS08665 3598035dd2fccfe7151958d5b7772e2b 480 Pfam PF02637 GatB domain 327 474 2.8E-47 T 25-04-2016 IPR018027 Asn/Gln amidotransferase GO:0016884 SMA_RS08665 3598035dd2fccfe7151958d5b7772e2b 480 SUPERFAMILY SSF55931 4 295 5.56E-118 T 25-04-2016 SMA_RS08665 3598035dd2fccfe7151958d5b7772e2b 480 PANTHER PTHR11659:SF0 2 479 7.3E-246 T 25-04-2016 SMA_RS08665 3598035dd2fccfe7151958d5b7772e2b 480 ProSitePatterns PS01234 Glutamyl-tRNA(Gln) amidotransferase subunit B signature. 143 157 - T 25-04-2016 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site GO:0016884 SMA_RS08665 3598035dd2fccfe7151958d5b7772e2b 480 SUPERFAMILY SSF89095 296 401 3.4E-33 T 25-04-2016 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related GO:0016884 SMA_RS08665 3598035dd2fccfe7151958d5b7772e2b 480 SMART SM00845 327 474 2.0E-63 T 25-04-2016 IPR018027 Asn/Gln amidotransferase GO:0016884 SMA_RS08665 3598035dd2fccfe7151958d5b7772e2b 480 PANTHER PTHR11659 2 479 7.3E-246 T 25-04-2016 IPR017959 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit B /E GO:0016884 SMA_RS08665 3598035dd2fccfe7151958d5b7772e2b 480 Pfam PF02934 GatB/GatE catalytic domain 5 288 9.5E-109 T 25-04-2016 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic GO:0016874 SMA_RS10040 954ed3c2ec61dd69ab52afca8466b5d8 813 Gene3D G3DSA:3.40.50.300 191 374 8.7E-42 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS10040 954ed3c2ec61dd69ab52afca8466b5d8 813 PANTHER PTHR11638:SF18 1 143 0.0 T 25-04-2016 SMA_RS10040 954ed3c2ec61dd69ab52afca8466b5d8 813 PANTHER PTHR11638:SF18 186 812 0.0 T 25-04-2016 SMA_RS10040 954ed3c2ec61dd69ab52afca8466b5d8 813 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 326 338 - T 25-04-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 SMA_RS10040 954ed3c2ec61dd69ab52afca8466b5d8 813 Pfam PF07724 AAA domain (Cdc48 subfamily) 543 714 1.3E-54 T 25-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 SMA_RS10040 954ed3c2ec61dd69ab52afca8466b5d8 813 SMART SM00382 230 375 8.5E-10 T 25-04-2016 IPR003593 AAA+ ATPase domain SMA_RS10040 954ed3c2ec61dd69ab52afca8466b5d8 813 SMART SM00382 544 683 9.0E-12 T 25-04-2016 IPR003593 AAA+ ATPase domain SMA_RS10040 954ed3c2ec61dd69ab52afca8466b5d8 813 SUPERFAMILY SSF52540 193 443 6.74E-61 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS10040 954ed3c2ec61dd69ab52afca8466b5d8 813 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 721 800 1.4E-24 T 25-04-2016 IPR019489 Clp ATPase, C-terminal SMA_RS10040 954ed3c2ec61dd69ab52afca8466b5d8 813 PANTHER PTHR11638 1 143 0.0 T 25-04-2016 SMA_RS10040 954ed3c2ec61dd69ab52afca8466b5d8 813 PANTHER PTHR11638 186 812 0.0 T 25-04-2016 SMA_RS10040 954ed3c2ec61dd69ab52afca8466b5d8 813 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 655 669 5.9E-42 T 25-04-2016 IPR001270 ClpA/B family GO:0005524 SMA_RS10040 954ed3c2ec61dd69ab52afca8466b5d8 813 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 593 611 5.9E-42 T 25-04-2016 IPR001270 ClpA/B family GO:0005524 SMA_RS10040 954ed3c2ec61dd69ab52afca8466b5d8 813 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 622 640 5.9E-42 T 25-04-2016 IPR001270 ClpA/B family GO:0005524 SMA_RS10040 954ed3c2ec61dd69ab52afca8466b5d8 813 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 548 566 5.9E-42 T 25-04-2016 IPR001270 ClpA/B family GO:0005524 SMA_RS10040 954ed3c2ec61dd69ab52afca8466b5d8 813 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 235 366 1.2E-12 T 25-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 SMA_RS10040 954ed3c2ec61dd69ab52afca8466b5d8 813 Gene3D G3DSA:3.40.50.300 497 732 1.5E-53 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS10040 954ed3c2ec61dd69ab52afca8466b5d8 813 SMART SM01086 721 810 1.4E-35 T 25-04-2016 IPR019489 Clp ATPase, C-terminal SMA_RS10040 954ed3c2ec61dd69ab52afca8466b5d8 813 Gene3D G3DSA:1.10.8.60 375 439 6.3E-23 T 25-04-2016 SMA_RS10040 954ed3c2ec61dd69ab52afca8466b5d8 813 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 95 134 0.13 T 25-04-2016 IPR004176 Clp, N-terminal GO:0019538 SMA_RS10040 954ed3c2ec61dd69ab52afca8466b5d8 813 Gene3D G3DSA:1.10.8.60 733 811 6.6E-30 T 25-04-2016 SMA_RS10040 954ed3c2ec61dd69ab52afca8466b5d8 813 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 578 596 - T 25-04-2016 IPR028299 ClpA/B, conserved site 2 SMA_RS10040 954ed3c2ec61dd69ab52afca8466b5d8 813 Gene3D G3DSA:1.10.1780.10 151 173 1.0E-15 T 25-04-2016 IPR004176 Clp, N-terminal GO:0019538 SMA_RS10040 954ed3c2ec61dd69ab52afca8466b5d8 813 Gene3D G3DSA:1.10.1780.10 2 117 1.0E-15 T 25-04-2016 IPR004176 Clp, N-terminal GO:0019538 SMA_RS10040 954ed3c2ec61dd69ab52afca8466b5d8 813 SUPERFAMILY SSF81923 151 161 3.14E-11 T 25-04-2016 IPR004176 Clp, N-terminal GO:0019538 SMA_RS10040 954ed3c2ec61dd69ab52afca8466b5d8 813 SUPERFAMILY SSF81923 3 117 3.14E-11 T 25-04-2016 IPR004176 Clp, N-terminal GO:0019538 SMA_RS10040 954ed3c2ec61dd69ab52afca8466b5d8 813 SUPERFAMILY SSF52540 493 803 9.07E-78 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS02535 756d00fc7cdd68f3be454b31acfd25ad 309 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 34 52 - T 25-04-2016 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 SMA_RS02535 756d00fc7cdd68f3be454b31acfd25ad 309 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 8 294 4.8E-65 T 25-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme SMA_RS02535 756d00fc7cdd68f3be454b31acfd25ad 309 SUPERFAMILY SSF53686 3 306 1.96E-96 T 25-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme SMA_RS02535 756d00fc7cdd68f3be454b31acfd25ad 309 TIGRFAM TIGR01139 cysK: cysteine synthase A 8 305 1.7E-132 T 25-04-2016 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 SMA_RS02535 756d00fc7cdd68f3be454b31acfd25ad 309 PANTHER PTHR10314:SF110 3 306 6.2E-143 T 25-04-2016 SMA_RS02535 756d00fc7cdd68f3be454b31acfd25ad 309 Gene3D G3DSA:3.40.50.1100 150 306 5.1E-67 T 25-04-2016 SMA_RS02535 756d00fc7cdd68f3be454b31acfd25ad 309 Gene3D G3DSA:3.40.50.1100 2 43 5.1E-67 T 25-04-2016 SMA_RS02535 756d00fc7cdd68f3be454b31acfd25ad 309 PANTHER PTHR10314 3 306 6.2E-143 T 25-04-2016 SMA_RS02535 756d00fc7cdd68f3be454b31acfd25ad 309 Gene3D G3DSA:3.40.50.1100 44 141 2.1E-44 T 25-04-2016 SMA_RS02535 756d00fc7cdd68f3be454b31acfd25ad 309 TIGRFAM TIGR01136 cysKM: cysteine synthase 8 305 7.6E-126 T 25-04-2016 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 SMA_RS04760 c0ddfd3411e000ba6e4c6a367f44f13e 278 Gene3D G3DSA:2.60.200.30 129 244 2.9E-29 T 25-04-2016 IPR017437 ATP-NAD kinase, PpnK-type, all-beta GO:0003951|GO:0008152|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 SMA_RS04760 c0ddfd3411e000ba6e4c6a367f44f13e 278 SUPERFAMILY SSF111331 33 272 8.37E-56 T 25-04-2016 IPR016064 NAD kinase/diacylglycerol kinase-like domain SMA_RS04760 c0ddfd3411e000ba6e4c6a367f44f13e 278 Pfam PF01513 ATP-NAD kinase 44 228 9.9E-22 T 25-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 SMA_RS04760 c0ddfd3411e000ba6e4c6a367f44f13e 278 PANTHER PTHR20275 45 270 4.3E-48 T 25-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 SMA_RS04760 c0ddfd3411e000ba6e4c6a367f44f13e 278 Gene3D G3DSA:3.40.50.10330 25 128 2.4E-19 T 25-04-2016 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 GO:0003951|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 SMA_RS04760 c0ddfd3411e000ba6e4c6a367f44f13e 278 Hamap MF_00361 NAD kinase [nadK]. 11 274 23.138 T 25-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 SMA_RS08035 27f417e16ff3654cdcf3518cb458725a 113 Pfam PF00543 Nitrogen regulatory protein P-II 4 106 1.4E-36 T 25-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 SMA_RS08035 27f417e16ff3654cdcf3518cb458725a 113 ProSitePatterns PS00638 P-II protein C-terminal region signature. 84 97 - T 25-04-2016 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 SMA_RS08035 27f417e16ff3654cdcf3518cb458725a 113 PANTHER PTHR30115 1 113 7.6E-47 T 25-04-2016 SMA_RS08035 27f417e16ff3654cdcf3518cb458725a 113 SMART SM00938 4 106 3.9E-48 T 25-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 SMA_RS08035 27f417e16ff3654cdcf3518cb458725a 113 PRINTS PR00340 P-II protein signature 2 17 1.0E-23 T 25-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 SMA_RS08035 27f417e16ff3654cdcf3518cb458725a 113 PRINTS PR00340 P-II protein signature 53 76 1.0E-23 T 25-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 SMA_RS08035 27f417e16ff3654cdcf3518cb458725a 113 PRINTS PR00340 P-II protein signature 84 104 1.0E-23 T 25-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 SMA_RS08035 27f417e16ff3654cdcf3518cb458725a 113 Gene3D G3DSA:3.30.70.120 1 113 6.5E-43 T 25-04-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal SMA_RS08035 27f417e16ff3654cdcf3518cb458725a 113 SUPERFAMILY SSF54913 1 113 9.21E-38 T 25-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta SMA_RS01145 2cd085cb9dd7e256a0f7b5019c32ac16 237 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 40 56 7.0E-7 T 25-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SMA_RS01145 2cd085cb9dd7e256a0f7b5019c32ac16 237 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 26 40 7.0E-7 T 25-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SMA_RS01145 2cd085cb9dd7e256a0f7b5019c32ac16 237 Pfam PF07702 UTRA domain 93 228 1.0E-37 T 25-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 SMA_RS01145 2cd085cb9dd7e256a0f7b5019c32ac16 237 SMART SM00866 90 229 4.8E-38 T 25-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 SMA_RS01145 2cd085cb9dd7e256a0f7b5019c32ac16 237 Gene3D G3DSA:1.10.10.10 2 63 1.6E-24 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMA_RS01145 2cd085cb9dd7e256a0f7b5019c32ac16 237 PANTHER PTHR11751 118 142 1.0E-34 T 25-04-2016 SMA_RS01145 2cd085cb9dd7e256a0f7b5019c32ac16 237 PANTHER PTHR11751 1 68 1.0E-34 T 25-04-2016 SMA_RS01145 2cd085cb9dd7e256a0f7b5019c32ac16 237 SUPERFAMILY SSF46785 3 74 2.07E-20 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMA_RS01145 2cd085cb9dd7e256a0f7b5019c32ac16 237 Gene3D G3DSA:3.40.1410.10 64 235 1.8E-56 T 25-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain SMA_RS01145 2cd085cb9dd7e256a0f7b5019c32ac16 237 SUPERFAMILY SSF64288 54 235 2.51E-46 T 25-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain SMA_RS01145 2cd085cb9dd7e256a0f7b5019c32ac16 237 PANTHER PTHR11751:SF381 118 142 1.0E-34 T 25-04-2016 SMA_RS01145 2cd085cb9dd7e256a0f7b5019c32ac16 237 PANTHER PTHR11751:SF381 1 68 1.0E-34 T 25-04-2016 SMA_RS01145 2cd085cb9dd7e256a0f7b5019c32ac16 237 Pfam PF00392 Bacterial regulatory proteins, gntR family 4 66 3.2E-18 T 25-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SMA_RS01145 2cd085cb9dd7e256a0f7b5019c32ac16 237 SMART SM00345 7 66 1.8E-18 T 25-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SMA_RS09295 bfa0539f93de4e5aaa4309b55e35996a 351 PANTHER PTHR10953 105 201 9.9E-24 T 25-04-2016 SMA_RS09295 bfa0539f93de4e5aaa4309b55e35996a 351 SUPERFAMILY SSF69572 105 348 6.02E-43 T 25-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 SMA_RS09295 bfa0539f93de4e5aaa4309b55e35996a 351 Pfam PF00899 ThiF family 104 343 2.0E-34 T 25-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 SMA_RS09295 bfa0539f93de4e5aaa4309b55e35996a 351 Gene3D G3DSA:3.40.50.720 105 346 9.3E-33 T 25-04-2016 IPR016040 NAD(P)-binding domain SMA_RS07355 82b5135c1ba77bdd9b2c19dca4f75130 336 Pfam PF03462 PCRF domain 2 189 3.3E-60 T 25-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 SMA_RS07355 82b5135c1ba77bdd9b2c19dca4f75130 336 PANTHER PTHR11075:SF6 1 334 1.2E-149 T 25-04-2016 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 SMA_RS07355 82b5135c1ba77bdd9b2c19dca4f75130 336 PANTHER PTHR11075 1 334 1.2E-149 T 25-04-2016 SMA_RS07355 82b5135c1ba77bdd9b2c19dca4f75130 336 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 214 230 - T 25-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 SMA_RS07355 82b5135c1ba77bdd9b2c19dca4f75130 336 Hamap MF_00094 Peptide chain release factor 2 [prfB]. 1 335 36.956 T 25-04-2016 IPR020853 Peptide chain release factor 2, bacterial GO:0005737|GO:0006415|GO:0016149 SMA_RS07355 82b5135c1ba77bdd9b2c19dca4f75130 336 SUPERFAMILY SSF75620 1 334 2.22E-130 T 25-04-2016 SMA_RS07355 82b5135c1ba77bdd9b2c19dca4f75130 336 Gene3D G3DSA:1.20.58.410 1 83 1.8E-15 T 25-04-2016 SMA_RS07355 82b5135c1ba77bdd9b2c19dca4f75130 336 Gene3D G3DSA:3.30.160.20 197 275 5.0E-32 T 25-04-2016 IPR014720 Double-stranded RNA-binding domain SMA_RS07355 82b5135c1ba77bdd9b2c19dca4f75130 336 SMART SM00937 46 164 3.0E-56 T 25-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 SMA_RS07355 82b5135c1ba77bdd9b2c19dca4f75130 336 Pfam PF00472 RF-1 domain 198 307 7.1E-38 T 25-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 SMA_RS07355 82b5135c1ba77bdd9b2c19dca4f75130 336 TIGRFAM TIGR00020 prfB: peptide chain release factor 2 2 334 2.2E-146 T 25-04-2016 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 SMA_RS00240 e375ac44ad714d503558a1ae60d1ee5b 236 PANTHER PTHR11609 3 232 6.2E-112 T 25-04-2016 SMA_RS00240 e375ac44ad714d503558a1ae60d1ee5b 236 Gene3D G3DSA:3.30.200.20 5 93 1.1E-36 T 25-04-2016 SMA_RS00240 e375ac44ad714d503558a1ae60d1ee5b 236 PANTHER PTHR11609:SF2 3 232 6.2E-112 T 25-04-2016 SMA_RS00240 e375ac44ad714d503558a1ae60d1ee5b 236 ProSitePatterns PS01058 SAICAR synthetase signature 2. 173 181 - T 25-04-2016 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 SMA_RS00240 e375ac44ad714d503558a1ae60d1ee5b 236 SUPERFAMILY SSF56104 12 232 5.23E-78 T 25-04-2016 SMA_RS00240 e375ac44ad714d503558a1ae60d1ee5b 236 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 3 234 33.172 T 25-04-2016 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 SMA_RS00240 e375ac44ad714d503558a1ae60d1ee5b 236 TIGRFAM TIGR00081 purC: phosphoribosylaminoimidazolesuccinocarboxamide synthase 6 205 7.7E-68 T 25-04-2016 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 SMA_RS00240 e375ac44ad714d503558a1ae60d1ee5b 236 Pfam PF01259 SAICAR synthetase 5 229 2.0E-61 T 25-04-2016 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 SMA_RS00240 e375ac44ad714d503558a1ae60d1ee5b 236 Gene3D G3DSA:3.30.470.20 94 219 2.9E-50 T 25-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 SMA_RS00240 e375ac44ad714d503558a1ae60d1ee5b 236 ProSitePatterns PS01057 SAICAR synthetase signature 1. 86 100 - T 25-04-2016 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 SMA_RS05715 58b1abc45a379dc4ad3ac15b74f3b364 326 Gene3D G3DSA:3.20.20.70 4 326 5.8E-133 T 25-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SMA_RS05715 58b1abc45a379dc4ad3ac15b74f3b364 326 PANTHER PTHR39340 1 322 4.5E-137 T 25-04-2016 SMA_RS05715 58b1abc45a379dc4ad3ac15b74f3b364 326 Hamap MF_00734 Tagatose 1,6-diphosphate aldolase [lacD]. 1 326 210.598 T 25-04-2016 IPR005927 Tagatose 1,6-diphosphate aldolase GO:0009024|GO:0019512 KEGG: 00052+4.1.2.40|MetaCyc: PWY-7077|MetaCyc: PWY-7395|UniPathway: UPA00704 SMA_RS05715 58b1abc45a379dc4ad3ac15b74f3b364 326 SUPERFAMILY SSF51569 7 322 8.42E-67 T 25-04-2016 SMA_RS05715 58b1abc45a379dc4ad3ac15b74f3b364 326 Pfam PF01791 DeoC/LacD family aldolase 21 282 4.5E-73 T 25-04-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 SMA_RS05715 58b1abc45a379dc4ad3ac15b74f3b364 326 TIGRFAM TIGR01232 lacD: tagatose 1,6-diphosphate aldolase 2 326 1.2E-213 T 25-04-2016 IPR005927 Tagatose 1,6-diphosphate aldolase GO:0009024|GO:0019512 KEGG: 00052+4.1.2.40|MetaCyc: PWY-7077|MetaCyc: PWY-7395|UniPathway: UPA00704 SMA_RS05715 58b1abc45a379dc4ad3ac15b74f3b364 326 SMART SM01133 21 283 1.1E-28 T 25-04-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 SMA_RS05715 58b1abc45a379dc4ad3ac15b74f3b364 326 PANTHER PTHR39340:SF1 1 322 4.5E-137 T 25-04-2016 SMA_RS07895 b732ebc40df2b16e667fa1f228c2443a 216 SMART SM00529 23 122 6.8E-34 T 25-04-2016 IPR022689 Iron dependent repressor GO:0003700|GO:0006355|GO:0046914 SMA_RS07895 b732ebc40df2b16e667fa1f228c2443a 216 SUPERFAMILY SSF47979 62 137 1.06E-23 T 25-04-2016 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 SMA_RS07895 b732ebc40df2b16e667fa1f228c2443a 216 Pfam PF01325 Iron dependent repressor, N-terminal DNA binding domain 2 55 2.3E-12 T 25-04-2016 IPR022687 DTXR-type HTH domain GO:0003677 SMA_RS07895 b732ebc40df2b16e667fa1f228c2443a 216 SMART SM00899 142 214 0.003 T 25-04-2016 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 SMA_RS07895 b732ebc40df2b16e667fa1f228c2443a 216 PANTHER PTHR33238 1 216 2.6E-63 T 25-04-2016 SMA_RS07895 b732ebc40df2b16e667fa1f228c2443a 216 SUPERFAMILY SSF46785 1 59 9.87E-12 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMA_RS07895 b732ebc40df2b16e667fa1f228c2443a 216 Gene3D G3DSA:1.10.10.10 1 68 2.7E-20 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMA_RS07895 b732ebc40df2b16e667fa1f228c2443a 216 Pfam PF02742 Iron dependent repressor, metal binding and dimerisation domain 62 130 1.3E-24 T 25-04-2016 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 SMA_RS07895 b732ebc40df2b16e667fa1f228c2443a 216 Pfam PF04023 FeoA domain 143 213 2.0E-7 T 25-04-2016 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 SMA_RS07895 b732ebc40df2b16e667fa1f228c2443a 216 PANTHER PTHR33238:SF1 1 216 2.6E-63 T 25-04-2016 SMA_RS07895 b732ebc40df2b16e667fa1f228c2443a 216 Gene3D G3DSA:1.10.60.10 72 133 6.3E-27 T 25-04-2016 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 SMA_RS06215 19f08d3a2a866474983fc70f3f817a81 362 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 2 356 47.769 T 25-04-2016 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SMA_RS06215 19f08d3a2a866474983fc70f3f817a81 362 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 4 130 4.5E-53 T 25-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SMA_RS06215 19f08d3a2a866474983fc70f3f817a81 362 Gene3D G3DSA:3.50.30.20 2 146 4.3E-61 T 25-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SMA_RS06215 19f08d3a2a866474983fc70f3f817a81 362 Gene3D G3DSA:3.40.50.880 165 355 5.8E-68 T 25-04-2016 IPR029062 Class I glutamine amidotransferase-like SMA_RS06215 19f08d3a2a866474983fc70f3f817a81 362 PRINTS PR00097 Anthranilate synthase component II signature 215 224 2.6E-7 T 25-04-2016 SMA_RS06215 19f08d3a2a866474983fc70f3f817a81 362 PRINTS PR00097 Anthranilate synthase component II signature 327 340 2.6E-7 T 25-04-2016 SMA_RS06215 19f08d3a2a866474983fc70f3f817a81 362 PRINTS PR00097 Anthranilate synthase component II signature 242 253 2.6E-7 T 25-04-2016 SMA_RS06215 19f08d3a2a866474983fc70f3f817a81 362 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 242 258 8.4E-36 T 25-04-2016 SMA_RS06215 19f08d3a2a866474983fc70f3f817a81 362 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 259 276 8.4E-36 T 25-04-2016 SMA_RS06215 19f08d3a2a866474983fc70f3f817a81 362 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 284 295 8.4E-36 T 25-04-2016 SMA_RS06215 19f08d3a2a866474983fc70f3f817a81 362 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 212 226 8.4E-36 T 25-04-2016 SMA_RS06215 19f08d3a2a866474983fc70f3f817a81 362 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 173 187 8.4E-36 T 25-04-2016 SMA_RS06215 19f08d3a2a866474983fc70f3f817a81 362 PRINTS PR00096 Glutamine amidotransferase superfamily signature 242 253 4.8E-12 T 25-04-2016 SMA_RS06215 19f08d3a2a866474983fc70f3f817a81 362 PRINTS PR00096 Glutamine amidotransferase superfamily signature 327 340 4.8E-12 T 25-04-2016 SMA_RS06215 19f08d3a2a866474983fc70f3f817a81 362 PRINTS PR00096 Glutamine amidotransferase superfamily signature 215 224 4.8E-12 T 25-04-2016 SMA_RS06215 19f08d3a2a866474983fc70f3f817a81 362 SUPERFAMILY SSF52317 139 353 5.29E-60 T 25-04-2016 IPR029062 Class I glutamine amidotransferase-like SMA_RS06215 19f08d3a2a866474983fc70f3f817a81 362 Pfam PF00117 Glutamine amidotransferase class-I 175 350 5.4E-47 T 25-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 SMA_RS06215 19f08d3a2a866474983fc70f3f817a81 362 SUPERFAMILY SSF52021 2 146 4.97E-57 T 25-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SMA_RS06215 19f08d3a2a866474983fc70f3f817a81 362 SMART SM01097 2 132 1.3E-87 T 25-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SMA_RS06215 19f08d3a2a866474983fc70f3f817a81 362 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 5 353 4.2E-146 T 25-04-2016 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SMA_RS06215 19f08d3a2a866474983fc70f3f817a81 362 PANTHER PTHR11405 2 357 1.5E-212 T 25-04-2016 SMA_RS02555 fe1ef18415133885d0ecd885d9517e6e 182 PANTHER PTHR33231 1 182 1.3E-58 T 25-04-2016 SMA_RS02555 fe1ef18415133885d0ecd885d9517e6e 182 Pfam PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus 125 178 1.0E-24 T 25-04-2016 IPR032528 Sigma 54 modulation/S30EA ribosomal protein, C-terminal SMA_RS02555 fe1ef18415133885d0ecd885d9517e6e 182 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 3 103 8.1E-28 T 25-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 SMA_RS02555 fe1ef18415133885d0ecd885d9517e6e 182 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 5 96 1.6E-27 T 25-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 SMA_RS02555 fe1ef18415133885d0ecd885d9517e6e 182 Gene3D G3DSA:3.30.160.100 3 95 4.9E-32 T 25-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 SMA_RS02555 fe1ef18415133885d0ecd885d9517e6e 182 SUPERFAMILY SSF69754 3 112 2.22E-30 T 25-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 SMA_RS07370 1a1c5ff4e7e22e4b7b3a48c53c699772 893 SUPERFAMILY SSF81665 671 884 2.09E-127 T 25-04-2016 SMA_RS07370 1a1c5ff4e7e22e4b7b3a48c53c699772 893 SUPERFAMILY SSF81665 234 328 2.09E-127 T 25-04-2016 SMA_RS07370 1a1c5ff4e7e22e4b7b3a48c53c699772 893 SUPERFAMILY SSF81665 11 123 2.09E-127 T 25-04-2016 SMA_RS07370 1a1c5ff4e7e22e4b7b3a48c53c699772 893 SMART SM00831 9 82 2.8E-26 T 25-04-2016 IPR004014 Cation-transporting P-type ATPase, N-terminal SMA_RS07370 1a1c5ff4e7e22e4b7b3a48c53c699772 893 Gene3D G3DSA:2.70.150.10 118 233 5.0E-42 T 25-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 SMA_RS07370 1a1c5ff4e7e22e4b7b3a48c53c699772 893 Gene3D G3DSA:2.70.150.10 24 60 5.0E-42 T 25-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 SMA_RS07370 1a1c5ff4e7e22e4b7b3a48c53c699772 893 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 587 702 3.1E-34 T 25-04-2016 IPR001757 P-type ATPase GO:0016021 SMA_RS07370 1a1c5ff4e7e22e4b7b3a48c53c699772 893 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 218 365 2.9E-26 T 25-04-2016 IPR001757 P-type ATPase GO:0016021 SMA_RS07370 1a1c5ff4e7e22e4b7b3a48c53c699772 893 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 92 185 1.1E-20 T 25-04-2016 IPR001757 P-type ATPase GO:0016021 SMA_RS07370 1a1c5ff4e7e22e4b7b3a48c53c699772 893 Pfam PF00689 Cation transporting ATPase, C-terminus 706 881 7.6E-46 T 25-04-2016 IPR006068 Cation-transporting P-type ATPase, C-terminal SMA_RS07370 1a1c5ff4e7e22e4b7b3a48c53c699772 893 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 517 528 7.4E-38 T 25-04-2016 SMA_RS07370 1a1c5ff4e7e22e4b7b3a48c53c699772 893 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 170 184 7.4E-38 T 25-04-2016 SMA_RS07370 1a1c5ff4e7e22e4b7b3a48c53c699772 893 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 334 348 7.4E-38 T 25-04-2016 SMA_RS07370 1a1c5ff4e7e22e4b7b3a48c53c699772 893 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 539 549 7.4E-38 T 25-04-2016 SMA_RS07370 1a1c5ff4e7e22e4b7b3a48c53c699772 893 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 645 657 7.4E-38 T 25-04-2016 SMA_RS07370 1a1c5ff4e7e22e4b7b3a48c53c699772 893 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 621 640 7.4E-38 T 25-04-2016 SMA_RS07370 1a1c5ff4e7e22e4b7b3a48c53c699772 893 Gene3D G3DSA:1.20.1110.10 61 117 3.6E-120 T 25-04-2016 IPR023298 P-type ATPase, transmembrane domain SMA_RS07370 1a1c5ff4e7e22e4b7b3a48c53c699772 893 Gene3D G3DSA:1.20.1110.10 590 884 3.6E-120 T 25-04-2016 IPR023298 P-type ATPase, transmembrane domain SMA_RS07370 1a1c5ff4e7e22e4b7b3a48c53c699772 893 SUPERFAMILY SSF81660 341 521 6.87E-48 T 25-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 SMA_RS07370 1a1c5ff4e7e22e4b7b3a48c53c699772 893 Pfam PF00702 haloacid dehalogenase-like hydrolase 332 635 2.2E-24 T 25-04-2016 SMA_RS07370 1a1c5ff4e7e22e4b7b3a48c53c699772 893 Pfam PF00122 E1-E2 ATPase 91 325 1.1E-65 T 25-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 SMA_RS07370 1a1c5ff4e7e22e4b7b3a48c53c699772 893 Gene3D G3DSA:3.40.1110.10 325 524 1.7E-58 T 25-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 SMA_RS07370 1a1c5ff4e7e22e4b7b3a48c53c699772 893 SUPERFAMILY SSF81653 123 233 1.44E-30 T 25-04-2016 SMA_RS07370 1a1c5ff4e7e22e4b7b3a48c53c699772 893 PANTHER PTHR24093 24 891 0.0 T 25-04-2016 SMA_RS07370 1a1c5ff4e7e22e4b7b3a48c53c699772 893 SUPERFAMILY SSF56784 332 352 3.87E-58 T 25-04-2016 IPR023214 HAD-like domain SMA_RS07370 1a1c5ff4e7e22e4b7b3a48c53c699772 893 SUPERFAMILY SSF56784 473 725 3.87E-58 T 25-04-2016 IPR023214 HAD-like domain SMA_RS07370 1a1c5ff4e7e22e4b7b3a48c53c699772 893 Pfam PF00690 Cation transporter/ATPase, N-terminus 13 77 1.4E-20 T 25-04-2016 IPR004014 Cation-transporting P-type ATPase, N-terminal SMA_RS07370 1a1c5ff4e7e22e4b7b3a48c53c699772 893 PANTHER PTHR24093:SF268 24 891 0.0 T 25-04-2016 SMA_RS07370 1a1c5ff4e7e22e4b7b3a48c53c699772 893 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 336 342 - T 25-04-2016 IPR018303 P-type ATPase, phosphorylation site SMA_RS07370 1a1c5ff4e7e22e4b7b3a48c53c699772 893 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 476 494 1.0E-17 T 25-04-2016 IPR001757 P-type ATPase GO:0016021 SMA_RS07370 1a1c5ff4e7e22e4b7b3a48c53c699772 893 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 593 609 1.0E-17 T 25-04-2016 IPR001757 P-type ATPase GO:0016021 SMA_RS07370 1a1c5ff4e7e22e4b7b3a48c53c699772 893 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 653 678 1.0E-17 T 25-04-2016 IPR001757 P-type ATPase GO:0016021 SMA_RS07370 1a1c5ff4e7e22e4b7b3a48c53c699772 893 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 621 637 1.0E-17 T 25-04-2016 IPR001757 P-type ATPase GO:0016021 SMA_RS03255 a8f668da99f9bfc147ef19a6429b2f7f 348 Pfam PF07478 D-ala D-ala ligase C-terminus 135 334 5.6E-73 T 25-04-2016 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SMA_RS03255 a8f668da99f9bfc147ef19a6429b2f7f 348 SUPERFAMILY SSF56059 127 337 4.77E-58 T 25-04-2016 SMA_RS03255 a8f668da99f9bfc147ef19a6429b2f7f 348 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 279 307 - T 25-04-2016 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SMA_RS03255 a8f668da99f9bfc147ef19a6429b2f7f 348 Gene3D G3DSA:3.30.470.20 118 143 1.3E-47 T 25-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 SMA_RS03255 a8f668da99f9bfc147ef19a6429b2f7f 348 Gene3D G3DSA:3.30.470.20 213 336 1.3E-47 T 25-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 SMA_RS03255 a8f668da99f9bfc147ef19a6429b2f7f 348 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 6 336 8.9E-100 T 25-04-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SMA_RS03255 a8f668da99f9bfc147ef19a6429b2f7f 348 Gene3D G3DSA:3.40.50.20 1 116 4.8E-31 T 25-04-2016 IPR016185 Pre-ATP-grasp domain SMA_RS03255 a8f668da99f9bfc147ef19a6429b2f7f 348 Gene3D G3DSA:3.30.1490.20 145 209 1.4E-25 T 25-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 SMA_RS03255 a8f668da99f9bfc147ef19a6429b2f7f 348 PIRSF PIRSF039102 1 345 1.0E-101 T 25-04-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SMA_RS03255 a8f668da99f9bfc147ef19a6429b2f7f 348 PANTHER PTHR23132 1 344 9.2E-153 T 25-04-2016 SMA_RS03255 a8f668da99f9bfc147ef19a6429b2f7f 348 PANTHER PTHR23132:SF8 1 344 9.2E-153 T 25-04-2016 SMA_RS03255 a8f668da99f9bfc147ef19a6429b2f7f 348 Pfam PF01820 D-ala D-ala ligase N-terminus 6 116 1.7E-25 T 25-04-2016 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SMA_RS03255 a8f668da99f9bfc147ef19a6429b2f7f 348 SUPERFAMILY SSF52440 3 126 1.25E-30 T 25-04-2016 IPR016185 Pre-ATP-grasp domain SMA_RS03255 a8f668da99f9bfc147ef19a6429b2f7f 348 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 94 105 - T 25-04-2016 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SMA_RS03255 a8f668da99f9bfc147ef19a6429b2f7f 348 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 4 337 38.931 T 25-04-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SMA_RS10365 dc61ebaf7e4abb9f75958401def94c8d 223 Gene3D G3DSA:3.30.1330.90 16 138 4.4E-30 T 25-04-2016 IPR029009 Allosteric substrate binding domain SMA_RS10365 dc61ebaf7e4abb9f75958401def94c8d 223 Pfam PF01842 ACT domain 153 214 6.1E-12 T 25-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 SMA_RS10365 dc61ebaf7e4abb9f75958401def94c8d 223 PIRSF PIRSF036692 4 223 1.1E-106 T 25-04-2016 IPR004643 Iron-sulphur-dependent L-serine dehydratase beta subunit GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17|UniPathway: UPA00138 SMA_RS10365 dc61ebaf7e4abb9f75958401def94c8d 223 SUPERFAMILY SSF55021 140 220 3.62E-20 T 25-04-2016 SMA_RS10365 dc61ebaf7e4abb9f75958401def94c8d 223 SUPERFAMILY SSF143548 22 141 5.89E-30 T 25-04-2016 IPR029009 Allosteric substrate binding domain SMA_RS10365 dc61ebaf7e4abb9f75958401def94c8d 223 TIGRFAM TIGR00719 sda_beta: L-serine dehydratase, iron-sulfur-dependent, beta subunit 5 200 7.7E-68 T 25-04-2016 IPR004643 Iron-sulphur-dependent L-serine dehydratase beta subunit GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17|UniPathway: UPA00138 SMA_RS10365 dc61ebaf7e4abb9f75958401def94c8d 223 PANTHER PTHR30182:SF2 1 223 5.3E-108 T 25-04-2016 SMA_RS10365 dc61ebaf7e4abb9f75958401def94c8d 223 PANTHER PTHR30182 1 223 5.3E-108 T 25-04-2016 SMA_RS10365 dc61ebaf7e4abb9f75958401def94c8d 223 Gene3D G3DSA:3.30.70.260 139 220 4.7E-25 T 25-04-2016 SMA_RS10365 dc61ebaf7e4abb9f75958401def94c8d 223 Pfam PF03315 Serine dehydratase beta chain 8 85 1.4E-12 T 25-04-2016 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17|UniPathway: UPA00138 SMA_RS01690 1ee56ac29fcc9704da832b70dadd0144 487 Gene3D G3DSA:1.10.287.40 257 341 1.5E-4 T 25-04-2016 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|UniPathway: UPA00906 SMA_RS01690 1ee56ac29fcc9704da832b70dadd0144 487 SUPERFAMILY SSF46589 255 339 7.32E-5 T 25-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 SMA_RS02065 2fbadbcdb8030ae0a93bff16ebfe4677 162 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 123 136 5.2E-13 T 25-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 SMA_RS02065 2fbadbcdb8030ae0a93bff16ebfe4677 162 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 91 104 5.2E-13 T 25-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 SMA_RS02065 2fbadbcdb8030ae0a93bff16ebfe4677 162 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 108 122 5.2E-13 T 25-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 SMA_RS02065 2fbadbcdb8030ae0a93bff16ebfe4677 162 Pfam PF00364 Biotin-requiring enzyme 88 161 2.5E-20 T 25-04-2016 IPR000089 Biotin/lipoyl attachment SMA_RS02065 2fbadbcdb8030ae0a93bff16ebfe4677 162 Gene3D G3DSA:2.40.50.100 86 162 1.3E-26 T 25-04-2016 SMA_RS02065 2fbadbcdb8030ae0a93bff16ebfe4677 162 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 118 135 - T 25-04-2016 IPR001882 Biotin-binding site SMA_RS02065 2fbadbcdb8030ae0a93bff16ebfe4677 162 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 2 162 2.1E-38 T 25-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 SMA_RS02065 2fbadbcdb8030ae0a93bff16ebfe4677 162 PANTHER PTHR23151 1 161 8.3E-29 T 25-04-2016 SMA_RS02065 2fbadbcdb8030ae0a93bff16ebfe4677 162 SUPERFAMILY SSF51230 88 161 2.49E-22 T 25-04-2016 IPR011053 Single hybrid motif SMA_RS04100 e4094d38ac7ef1bbf5cc89f2c39ee41c 581 SUPERFAMILY SSF51905 119 447 6.79E-55 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMA_RS04100 e4094d38ac7ef1bbf5cc89f2c39ee41c 581 SUPERFAMILY SSF51230 1 95 8.11E-24 T 25-04-2016 IPR011053 Single hybrid motif SMA_RS04100 e4094d38ac7ef1bbf5cc89f2c39ee41c 581 PANTHER PTHR22912:SF125 112 570 1.3E-174 T 25-04-2016 SMA_RS04100 e4094d38ac7ef1bbf5cc89f2c39ee41c 581 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 403 425 1.4E-34 T 25-04-2016 SMA_RS04100 e4094d38ac7ef1bbf5cc89f2c39ee41c 581 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 293 311 1.4E-34 T 25-04-2016 SMA_RS04100 e4094d38ac7ef1bbf5cc89f2c39ee41c 581 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 377 393 1.4E-34 T 25-04-2016 SMA_RS04100 e4094d38ac7ef1bbf5cc89f2c39ee41c 581 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 128 147 1.4E-34 T 25-04-2016 SMA_RS04100 e4094d38ac7ef1bbf5cc89f2c39ee41c 581 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 254 272 1.4E-34 T 25-04-2016 SMA_RS04100 e4094d38ac7ef1bbf5cc89f2c39ee41c 581 SUPERFAMILY SSF55424 457 576 2.58E-40 T 25-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 SMA_RS04100 e4094d38ac7ef1bbf5cc89f2c39ee41c 581 Gene3D G3DSA:2.40.50.100 1 95 1.8E-25 T 25-04-2016 SMA_RS04100 e4094d38ac7ef1bbf5cc89f2c39ee41c 581 Gene3D G3DSA:3.30.390.30 445 576 4.8E-46 T 25-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 SMA_RS04100 e4094d38ac7ef1bbf5cc89f2c39ee41c 581 Pfam PF00364 Biotin-requiring enzyme 4 75 9.7E-18 T 25-04-2016 IPR000089 Biotin/lipoyl attachment SMA_RS04100 e4094d38ac7ef1bbf5cc89f2c39ee41c 581 Gene3D G3DSA:3.50.50.60 124 257 3.7E-37 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMA_RS04100 e4094d38ac7ef1bbf5cc89f2c39ee41c 581 Gene3D G3DSA:3.50.50.60 258 444 9.1E-53 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMA_RS04100 e4094d38ac7ef1bbf5cc89f2c39ee41c 581 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 160 170 - T 25-04-2016 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 SMA_RS04100 e4094d38ac7ef1bbf5cc89f2c39ee41c 581 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 126 438 3.9E-66 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMA_RS04100 e4094d38ac7ef1bbf5cc89f2c39ee41c 581 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 125 576 7.1E-159 T 25-04-2016 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084 SMA_RS04100 e4094d38ac7ef1bbf5cc89f2c39ee41c 581 PIRSF PIRSF000350 44 568 4.2E-79 T 25-04-2016 SMA_RS04100 e4094d38ac7ef1bbf5cc89f2c39ee41c 581 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 127 149 5.7E-66 T 25-04-2016 SMA_RS04100 e4094d38ac7ef1bbf5cc89f2c39ee41c 581 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 418 425 5.7E-66 T 25-04-2016 SMA_RS04100 e4094d38ac7ef1bbf5cc89f2c39ee41c 581 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 541 561 5.7E-66 T 25-04-2016 SMA_RS04100 e4094d38ac7ef1bbf5cc89f2c39ee41c 581 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 454 475 5.7E-66 T 25-04-2016 SMA_RS04100 e4094d38ac7ef1bbf5cc89f2c39ee41c 581 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 519 534 5.7E-66 T 25-04-2016 SMA_RS04100 e4094d38ac7ef1bbf5cc89f2c39ee41c 581 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 257 266 5.7E-66 T 25-04-2016 SMA_RS04100 e4094d38ac7ef1bbf5cc89f2c39ee41c 581 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 378 392 5.7E-66 T 25-04-2016 SMA_RS04100 e4094d38ac7ef1bbf5cc89f2c39ee41c 581 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 293 318 5.7E-66 T 25-04-2016 SMA_RS04100 e4094d38ac7ef1bbf5cc89f2c39ee41c 581 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 159 174 5.7E-66 T 25-04-2016 SMA_RS04100 e4094d38ac7ef1bbf5cc89f2c39ee41c 581 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 25-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site SMA_RS04100 e4094d38ac7ef1bbf5cc89f2c39ee41c 581 PANTHER PTHR22912 112 570 1.3E-174 T 25-04-2016 SMA_RS04100 e4094d38ac7ef1bbf5cc89f2c39ee41c 581 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 458 566 3.6E-37 T 25-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 SMA_RS02240 a81c6f861a4cfcc73aa3d7f7e3c4e961 143 PIRSF PIRSF019455 1 128 2.3E-42 T 25-04-2016 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 SMA_RS02240 a81c6f861a4cfcc73aa3d7f7e3c4e961 143 Pfam PF03965 Penicillinase repressor 3 115 2.2E-36 T 25-04-2016 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 SMA_RS02240 a81c6f861a4cfcc73aa3d7f7e3c4e961 143 PANTHER PTHR34134:SF1 1 127 1.2E-28 T 25-04-2016 SMA_RS02240 a81c6f861a4cfcc73aa3d7f7e3c4e961 143 PANTHER PTHR34134 1 127 1.2E-28 T 25-04-2016 SMA_RS02240 a81c6f861a4cfcc73aa3d7f7e3c4e961 143 Gene3D G3DSA:1.10.10.10 1 77 5.8E-30 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMA_RS02240 a81c6f861a4cfcc73aa3d7f7e3c4e961 143 TIGRFAM TIGR02698 CopY_TcrY: copper transport repressor, CopY/TcrY family 2 131 2.3E-52 T 25-04-2016 IPR014071 Copper transport repressor CopY/TcrY SMA_RS02240 a81c6f861a4cfcc73aa3d7f7e3c4e961 143 SUPERFAMILY SSF46785 2 117 2.07E-29 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMA_RS03115 cef95a64173852b67879bedcbbd7fa28 712 PANTHER PTHR11649:SF37 1 143 1.6E-233 T 25-04-2016 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 SMA_RS03115 cef95a64173852b67879bedcbbd7fa28 712 PANTHER PTHR11649:SF37 261 673 1.6E-233 T 25-04-2016 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 SMA_RS03115 cef95a64173852b67879bedcbbd7fa28 712 Pfam PF02421 Ferrous iron transport protein B 3 155 3.5E-64 T 25-04-2016 IPR011619 Ferrous iron transport protein B, N-terminal GO:0005525|GO:0015093|GO:0015684|GO:0016021 SMA_RS03115 cef95a64173852b67879bedcbbd7fa28 712 PANTHER PTHR11649 1 143 1.6E-233 T 25-04-2016 SMA_RS03115 cef95a64173852b67879bedcbbd7fa28 712 PANTHER PTHR11649 261 673 1.6E-233 T 25-04-2016 SMA_RS03115 cef95a64173852b67879bedcbbd7fa28 712 Gene3D G3DSA:3.40.50.300 3 181 2.2E-32 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS03115 cef95a64173852b67879bedcbbd7fa28 712 Pfam PF07670 Nucleoside recognition 513 637 5.4E-31 T 25-04-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: REACT_15518|Reactome: REACT_1698 SMA_RS03115 cef95a64173852b67879bedcbbd7fa28 712 Pfam PF07670 Nucleoside recognition 352 446 9.6E-12 T 25-04-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: REACT_15518|Reactome: REACT_1698 SMA_RS03115 cef95a64173852b67879bedcbbd7fa28 712 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 4 24 7.5E-6 T 25-04-2016 IPR006073 GTP binding domain GO:0005525 SMA_RS03115 cef95a64173852b67879bedcbbd7fa28 712 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 25 43 7.5E-6 T 25-04-2016 IPR006073 GTP binding domain GO:0005525 SMA_RS03115 cef95a64173852b67879bedcbbd7fa28 712 TIGRFAM TIGR00437 feoB: ferrous iron transport protein B 8 634 1.2E-162 T 25-04-2016 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 SMA_RS03115 cef95a64173852b67879bedcbbd7fa28 712 SUPERFAMILY SSF52540 3 189 1.09E-37 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS03115 cef95a64173852b67879bedcbbd7fa28 712 Pfam PF07664 Ferrous iron transport protein B C terminus 456 506 1.5E-15 T 25-04-2016 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 SMA_RS01430 3aebf43cb68fdd9f57ac9832f40b4e8b 448 Gene3D G3DSA:3.40.50.620 20 308 7.1E-106 T 25-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SMA_RS01430 3aebf43cb68fdd9f57ac9832f40b4e8b 448 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 225 246 8.0E-29 T 25-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 SMA_RS01430 3aebf43cb68fdd9f57ac9832f40b4e8b 448 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 62 71 8.0E-29 T 25-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 SMA_RS01430 3aebf43cb68fdd9f57ac9832f40b4e8b 448 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 194 212 8.0E-29 T 25-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 SMA_RS01430 3aebf43cb68fdd9f57ac9832f40b4e8b 448 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 26 37 8.0E-29 T 25-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 SMA_RS01430 3aebf43cb68fdd9f57ac9832f40b4e8b 448 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 17 315 8.2E-132 T 25-04-2016 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 SMA_RS01430 3aebf43cb68fdd9f57ac9832f40b4e8b 448 SUPERFAMILY SSF52374 3 315 5.12E-99 T 25-04-2016 SMA_RS01430 3aebf43cb68fdd9f57ac9832f40b4e8b 448 SUPERFAMILY SSF47323 332 447 4.71E-32 T 25-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SMA_RS01430 3aebf43cb68fdd9f57ac9832f40b4e8b 448 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 3 448 37.283 T 25-04-2016 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16|Reactome: REACT_71 SMA_RS01430 3aebf43cb68fdd9f57ac9832f40b4e8b 448 Pfam PF09190 DALR domain 346 397 1.2E-16 T 25-04-2016 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 SMA_RS01430 3aebf43cb68fdd9f57ac9832f40b4e8b 448 Gene3D G3DSA:1.20.120.640 310 391 4.6E-17 T 25-04-2016 SMA_RS01430 3aebf43cb68fdd9f57ac9832f40b4e8b 448 SMART SM00840 345 407 2.3E-15 T 25-04-2016 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 SMA_RS01430 3aebf43cb68fdd9f57ac9832f40b4e8b 448 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 3 447 8.6E-167 T 25-04-2016 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16|Reactome: REACT_71 SMA_RS01430 3aebf43cb68fdd9f57ac9832f40b4e8b 448 PANTHER PTHR10890 1 445 1.4E-222 T 25-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 SMA_RS00065 bdcc38b08a58b5dc59218c60aeb6501f 180 TIGRFAM TIGR01203 HGPRTase: hypoxanthine phosphoribosyltransferase 9 174 1.2E-64 T 25-04-2016 IPR005904 Hypoxanthine phosphoribosyl transferase GO:0004422|GO:0005737|GO:0006166 KEGG: 00230+2.4.2.8|KEGG: 00983+2.4.2.8|MetaCyc: PWY-6599|MetaCyc: PWY-6609|MetaCyc: PWY-6610|MetaCyc: PWY-6620|UniPathway: UPA00591 SMA_RS00065 bdcc38b08a58b5dc59218c60aeb6501f 180 PANTHER PTHR22573 4 180 8.2E-81 T 25-04-2016 SMA_RS00065 bdcc38b08a58b5dc59218c60aeb6501f 180 Gene3D G3DSA:3.40.50.2020 2 179 7.8E-83 T 25-04-2016 IPR029057 Phosphoribosyltransferase-like SMA_RS00065 bdcc38b08a58b5dc59218c60aeb6501f 180 PANTHER PTHR22573:SF56 4 180 8.2E-81 T 25-04-2016 SMA_RS00065 bdcc38b08a58b5dc59218c60aeb6501f 180 Pfam PF00156 Phosphoribosyl transferase domain 11 160 6.6E-25 T 25-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 SMA_RS00065 bdcc38b08a58b5dc59218c60aeb6501f 180 SUPERFAMILY SSF53271 4 178 7.34E-60 T 25-04-2016 IPR029057 Phosphoribosyltransferase-like SMA_RS03940 7b71570a2798b779686a1ce4baeee6fc 197 PANTHER PTHR21047 2 192 2.9E-40 T 25-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 SMA_RS03940 7b71570a2798b779686a1ce4baeee6fc 197 SUPERFAMILY SSF51182 17 192 5.73E-51 T 25-04-2016 IPR011051 RmlC-like cupin domain SMA_RS03940 7b71570a2798b779686a1ce4baeee6fc 197 Gene3D G3DSA:2.60.120.10 17 192 9.7E-54 T 25-04-2016 IPR014710 RmlC-like jelly roll fold SMA_RS03940 7b71570a2798b779686a1ce4baeee6fc 197 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 18 188 1.1E-38 T 25-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 SMA_RS03940 7b71570a2798b779686a1ce4baeee6fc 197 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 11 195 7.0E-100 T 25-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 SMA_RS09475 64aab8288b79288a0484b8a088016594 44 PANTHER PTHR14503 2 44 6.0E-19 T 25-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS09475 64aab8288b79288a0484b8a088016594 44 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 1 26 1.0E-7 T 25-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS09475 64aab8288b79288a0484b8a088016594 44 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 1 44 15.636 T 25-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS09475 64aab8288b79288a0484b8a088016594 44 Pfam PF00468 Ribosomal protein L34 2 44 1.4E-22 T 25-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS09475 64aab8288b79288a0484b8a088016594 44 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 2 44 1.1E-20 T 25-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS09475 64aab8288b79288a0484b8a088016594 44 ProSitePatterns PS00784 Ribosomal protein L34 signature. 2 21 - T 25-04-2016 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS02290 08f4520ba994ea6927464fb2a44207ea 382 Pfam PF01979 Amidohydrolase family 50 371 1.2E-21 T 25-04-2016 IPR006680 Amidohydrolase-related GO:0016787 SMA_RS02290 08f4520ba994ea6927464fb2a44207ea 382 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 34 374 1.4E-90 T 25-04-2016 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395 SMA_RS02290 08f4520ba994ea6927464fb2a44207ea 382 Gene3D G3DSA:2.30.40.10 351 366 1.7E-7 T 25-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SMA_RS02290 08f4520ba994ea6927464fb2a44207ea 382 Gene3D G3DSA:2.30.40.10 21 53 1.7E-7 T 25-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SMA_RS02290 08f4520ba994ea6927464fb2a44207ea 382 SUPERFAMILY SSF51556 53 350 4.25E-96 T 25-04-2016 IPR032466 Metal-dependent hydrolase SMA_RS02290 08f4520ba994ea6927464fb2a44207ea 382 PANTHER PTHR11113 5 379 1.1E-139 T 25-04-2016 SMA_RS02290 08f4520ba994ea6927464fb2a44207ea 382 SUPERFAMILY SSF51338 350 381 1.3E-10 T 25-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SMA_RS02290 08f4520ba994ea6927464fb2a44207ea 382 SUPERFAMILY SSF51338 1 52 1.3E-10 T 25-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SMA_RS02290 08f4520ba994ea6927464fb2a44207ea 382 PIRSF PIRSF038994 2 382 3.3E-118 T 25-04-2016 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395 SMA_RS02290 08f4520ba994ea6927464fb2a44207ea 382 Gene3D G3DSA:3.20.20.140 54 350 5.5E-103 T 25-04-2016 SMA_RS02290 08f4520ba994ea6927464fb2a44207ea 382 PANTHER PTHR11113:SF7 5 379 1.1E-139 T 25-04-2016 SMA_RS05935 baaf435adb8c326cae931f45bf9f102c 551 SUPERFAMILY SSF53335 18 56 9.87E-136 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMA_RS05935 baaf435adb8c326cae931f45bf9f102c 551 SUPERFAMILY SSF53335 87 534 9.87E-136 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMA_RS05935 baaf435adb8c326cae931f45bf9f102c 551 TIGRFAM TIGR00497 hsdM: type I restriction-modification system, M subunit 18 513 2.5E-122 T 25-04-2016 IPR004546 Restriction endonuclease, type I, HsdM GO:0003677|GO:0009007|GO:0009307 SMA_RS05935 baaf435adb8c326cae931f45bf9f102c 551 Gene3D G3DSA:3.40.50.150 204 454 1.9E-38 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMA_RS05935 baaf435adb8c326cae931f45bf9f102c 551 PANTHER PTHR30408:SF4 164 519 3.0E-141 T 25-04-2016 SMA_RS05935 baaf435adb8c326cae931f45bf9f102c 551 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 316 322 - T 25-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 SMA_RS05935 baaf435adb8c326cae931f45bf9f102c 551 Pfam PF02384 N-6 DNA Methylase 179 499 5.7E-113 T 25-04-2016 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 SMA_RS05935 baaf435adb8c326cae931f45bf9f102c 551 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 202 218 8.8E-22 T 25-04-2016 SMA_RS05935 baaf435adb8c326cae931f45bf9f102c 551 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 313 325 8.8E-22 T 25-04-2016 SMA_RS05935 baaf435adb8c326cae931f45bf9f102c 551 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 231 245 8.8E-22 T 25-04-2016 SMA_RS05935 baaf435adb8c326cae931f45bf9f102c 551 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 349 373 8.8E-22 T 25-04-2016 SMA_RS05935 baaf435adb8c326cae931f45bf9f102c 551 Pfam PF12161 HsdM N-terminal domain 19 167 8.1E-25 T 25-04-2016 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain SMA_RS05935 baaf435adb8c326cae931f45bf9f102c 551 PANTHER PTHR30408 164 519 3.0E-141 T 25-04-2016 SMA_RS07485 c491181c5960dbcd7a80888d80b5d244 496 PANTHER PTHR22594 1 496 4.3E-269 T 25-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SMA_RS07485 c491181c5960dbcd7a80888d80b5d244 496 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 15 496 44.012 T 25-04-2016 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6 SMA_RS07485 c491181c5960dbcd7a80888d80b5d244 496 Gene3D G3DSA:2.40.50.140 10 149 4.1E-49 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMA_RS07485 c491181c5960dbcd7a80888d80b5d244 496 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 9 496 1.3E-210 T 25-04-2016 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6 SMA_RS07485 c491181c5960dbcd7a80888d80b5d244 496 PANTHER PTHR22594:SF4 1 496 4.3E-269 T 25-04-2016 SMA_RS07485 c491181c5960dbcd7a80888d80b5d244 496 Gene3D G3DSA:3.30.930.10 151 494 4.0E-122 T 25-04-2016 SMA_RS07485 c491181c5960dbcd7a80888d80b5d244 496 SUPERFAMILY SSF55681 156 495 5.36E-120 T 25-04-2016 SMA_RS07485 c491181c5960dbcd7a80888d80b5d244 496 Pfam PF00152 tRNA synthetases class II (D, K and N) 157 495 7.5E-80 T 25-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SMA_RS07485 c491181c5960dbcd7a80888d80b5d244 496 SUPERFAMILY SSF50249 8 149 1.57E-43 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMA_RS07485 c491181c5960dbcd7a80888d80b5d244 496 PRINTS PR00982 Lysyl-tRNA synthetase signature 380 396 8.1E-39 T 25-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 SMA_RS07485 c491181c5960dbcd7a80888d80b5d244 496 PRINTS PR00982 Lysyl-tRNA synthetase signature 193 203 8.1E-39 T 25-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 SMA_RS07485 c491181c5960dbcd7a80888d80b5d244 496 PRINTS PR00982 Lysyl-tRNA synthetase signature 238 251 8.1E-39 T 25-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 SMA_RS07485 c491181c5960dbcd7a80888d80b5d244 496 PRINTS PR00982 Lysyl-tRNA synthetase signature 256 273 8.1E-39 T 25-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 SMA_RS07485 c491181c5960dbcd7a80888d80b5d244 496 PRINTS PR00982 Lysyl-tRNA synthetase signature 209 225 8.1E-39 T 25-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 SMA_RS07485 c491181c5960dbcd7a80888d80b5d244 496 Pfam PF01336 OB-fold nucleic acid binding domain 64 138 5.2E-14 T 25-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 SMA_RS09945 525fba6804f02bd5a4b1208237fc89e3 258 SMART SM00849 18 213 4.5E-11 T 25-04-2016 IPR001279 Metallo-beta-lactamase SMA_RS09945 525fba6804f02bd5a4b1208237fc89e3 258 PANTHER PTHR12553 1 248 8.4E-38 T 25-04-2016 SMA_RS09945 525fba6804f02bd5a4b1208237fc89e3 258 Pfam PF12706 Beta-lactamase superfamily domain 33 213 3.3E-19 T 25-04-2016 IPR001279 Metallo-beta-lactamase SMA_RS09945 525fba6804f02bd5a4b1208237fc89e3 258 SUPERFAMILY SSF56281 1 240 3.8E-48 T 25-04-2016 IPR001279 Metallo-beta-lactamase SMA_RS09945 525fba6804f02bd5a4b1208237fc89e3 258 Gene3D G3DSA:3.60.15.10 1 240 1.3E-48 T 25-04-2016 IPR001279 Metallo-beta-lactamase SMA_RS00460 c06f46f91478a2f2e48657c29b4c309e 121 PANTHER PTHR10871 1 121 4.5E-70 T 25-04-2016 SMA_RS00460 c06f46f91478a2f2e48657c29b4c309e 121 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 119 27.287 T 25-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS00460 c06f46f91478a2f2e48657c29b4c309e 121 ProSitePatterns PS00646 Ribosomal protein S13 signature. 87 100 - T 25-04-2016 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 SMA_RS00460 c06f46f91478a2f2e48657c29b4c309e 121 Gene3D G3DSA:4.10.910.10 72 121 1.7E-27 T 25-04-2016 IPR027437 30s ribosomal protein S13, C-terminal SMA_RS00460 c06f46f91478a2f2e48657c29b4c309e 121 SUPERFAMILY SSF46946 2 112 3.24E-44 T 25-04-2016 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 SMA_RS00460 c06f46f91478a2f2e48657c29b4c309e 121 Gene3D G3DSA:1.10.8.50 1 71 1.1E-29 T 25-04-2016 SMA_RS00460 c06f46f91478a2f2e48657c29b4c309e 121 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 113 1.3E-51 T 25-04-2016 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS00460 c06f46f91478a2f2e48657c29b4c309e 121 PIRSF PIRSF002134 1 121 7.0E-43 T 25-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS00460 c06f46f91478a2f2e48657c29b4c309e 121 Pfam PF00416 Ribosomal protein S13/S18 62 108 3.0E-18 T 25-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS09640 9790317474d2146671530e644fb884cd 194 Pfam PF13384 Homeodomain-like domain 157 190 8.2E-6 T 25-04-2016 SMA_RS09640 9790317474d2146671530e644fb884cd 194 PANTHER PTHR30461 1 185 2.5E-32 T 25-04-2016 SMA_RS09640 9790317474d2146671530e644fb884cd 194 Pfam PF00239 Resolvase, N terminal domain 4 142 4.2E-33 T 25-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 SMA_RS09640 9790317474d2146671530e644fb884cd 194 SMART SM00857 3 142 6.3E-37 T 25-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 SMA_RS09640 9790317474d2146671530e644fb884cd 194 SUPERFAMILY SSF53041 1 142 1.7E-34 T 25-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 SMA_RS09640 9790317474d2146671530e644fb884cd 194 PANTHER PTHR30461:SF9 1 185 2.5E-32 T 25-04-2016 SMA_RS09640 9790317474d2146671530e644fb884cd 194 Gene3D G3DSA:3.40.50.1390 3 126 1.7E-32 T 25-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 SMA_RS09640 9790317474d2146671530e644fb884cd 194 ProSitePatterns PS00397 Site-specific recombinases active site. 6 14 - T 25-04-2016 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 SMA_RS04170 1605cd4045cff09b61b5c1a851595d41 99 SUPERFAMILY SSF52821 2 95 4.32E-30 T 25-04-2016 IPR001763 Rhodanese-like domain SMA_RS04170 1605cd4045cff09b61b5c1a851595d41 99 PANTHER PTHR12231 21 95 8.8E-13 T 25-04-2016 SMA_RS04170 1605cd4045cff09b61b5c1a851595d41 99 Pfam PF00581 Rhodanese-like domain 7 93 1.1E-16 T 25-04-2016 IPR001763 Rhodanese-like domain SMA_RS04170 1605cd4045cff09b61b5c1a851595d41 99 PANTHER PTHR12231:SF91 21 95 8.8E-13 T 25-04-2016 SMA_RS04170 1605cd4045cff09b61b5c1a851595d41 99 Gene3D G3DSA:3.40.250.10 2 94 1.6E-28 T 25-04-2016 IPR001763 Rhodanese-like domain SMA_RS04170 1605cd4045cff09b61b5c1a851595d41 99 SMART SM00450 5 99 1.6E-18 T 25-04-2016 IPR001763 Rhodanese-like domain SMA_RS02245 07200ff02cc427b7a0929bb75b049805 749 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 207 714 5.2E-100 T 25-04-2016 IPR001757 P-type ATPase GO:0016021 SMA_RS02245 07200ff02cc427b7a0929bb75b049805 749 Pfam PF00122 E1-E2 ATPase 206 427 9.0E-70 T 25-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 SMA_RS02245 07200ff02cc427b7a0929bb75b049805 749 SUPERFAMILY SSF56784 434 454 1.83E-62 T 25-04-2016 IPR023214 HAD-like domain SMA_RS02245 07200ff02cc427b7a0929bb75b049805 749 SUPERFAMILY SSF56784 492 741 1.83E-62 T 25-04-2016 IPR023214 HAD-like domain SMA_RS02245 07200ff02cc427b7a0929bb75b049805 749 SUPERFAMILY SSF81653 239 335 1.09E-28 T 25-04-2016 SMA_RS02245 07200ff02cc427b7a0929bb75b049805 749 SUPERFAMILY SSF81665 336 430 3.66E-16 T 25-04-2016 SMA_RS02245 07200ff02cc427b7a0929bb75b049805 749 SUPERFAMILY SSF81665 188 236 3.66E-16 T 25-04-2016 SMA_RS02245 07200ff02cc427b7a0929bb75b049805 749 SUPERFAMILY SSF81665 683 734 3.66E-16 T 25-04-2016 SMA_RS02245 07200ff02cc427b7a0929bb75b049805 749 Pfam PF00403 Heavy-metal-associated domain 7 64 1.2E-14 T 25-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 SMA_RS02245 07200ff02cc427b7a0929bb75b049805 749 Gene3D G3DSA:3.40.1110.10 450 561 1.7E-22 T 25-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 SMA_RS02245 07200ff02cc427b7a0929bb75b049805 749 Gene3D G3DSA:3.40.50.1000 562 703 1.7E-59 T 25-04-2016 IPR023214 HAD-like domain SMA_RS02245 07200ff02cc427b7a0929bb75b049805 749 Gene3D G3DSA:3.40.50.1000 407 449 1.7E-59 T 25-04-2016 IPR023214 HAD-like domain SMA_RS02245 07200ff02cc427b7a0929bb75b049805 749 Gene3D G3DSA:3.30.70.100 6 89 3.6E-21 T 25-04-2016 SMA_RS02245 07200ff02cc427b7a0929bb75b049805 749 Gene3D G3DSA:2.70.150.10 198 336 5.5E-34 T 25-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 SMA_RS02245 07200ff02cc427b7a0929bb75b049805 749 PANTHER PTHR24093 3 744 9.5E-260 T 25-04-2016 SMA_RS02245 07200ff02cc427b7a0929bb75b049805 749 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 149 744 4.8E-192 T 25-04-2016 SMA_RS02245 07200ff02cc427b7a0929bb75b049805 749 PRINTS PR00943 Copper-transporting ATPase signature 205 224 2.0E-22 T 25-04-2016 SMA_RS02245 07200ff02cc427b7a0929bb75b049805 749 PRINTS PR00943 Copper-transporting ATPase signature 611 628 2.0E-22 T 25-04-2016 SMA_RS02245 07200ff02cc427b7a0929bb75b049805 749 PRINTS PR00943 Copper-transporting ATPase signature 225 243 2.0E-22 T 25-04-2016 SMA_RS02245 07200ff02cc427b7a0929bb75b049805 749 PRINTS PR00943 Copper-transporting ATPase signature 419 434 2.0E-22 T 25-04-2016 SMA_RS02245 07200ff02cc427b7a0929bb75b049805 749 PRINTS PR00943 Copper-transporting ATPase signature 358 372 2.0E-22 T 25-04-2016 SMA_RS02245 07200ff02cc427b7a0929bb75b049805 749 PRINTS PR00943 Copper-transporting ATPase signature 132 150 2.0E-22 T 25-04-2016 SMA_RS02245 07200ff02cc427b7a0929bb75b049805 749 PRINTS PR00943 Copper-transporting ATPase signature 152 171 2.0E-22 T 25-04-2016 SMA_RS02245 07200ff02cc427b7a0929bb75b049805 749 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 438 444 - T 25-04-2016 IPR018303 P-type ATPase, phosphorylation site SMA_RS02245 07200ff02cc427b7a0929bb75b049805 749 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 634 653 1.6E-29 T 25-04-2016 SMA_RS02245 07200ff02cc427b7a0929bb75b049805 749 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 436 450 1.6E-29 T 25-04-2016 SMA_RS02245 07200ff02cc427b7a0929bb75b049805 749 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 285 299 1.6E-29 T 25-04-2016 SMA_RS02245 07200ff02cc427b7a0929bb75b049805 749 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 581 591 1.6E-29 T 25-04-2016 SMA_RS02245 07200ff02cc427b7a0929bb75b049805 749 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 657 669 1.6E-29 T 25-04-2016 SMA_RS02245 07200ff02cc427b7a0929bb75b049805 749 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 559 570 1.6E-29 T 25-04-2016 SMA_RS02245 07200ff02cc427b7a0929bb75b049805 749 ProSitePatterns PS01047 Heavy-metal-associated domain. 9 38 - T 25-04-2016 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 SMA_RS02245 07200ff02cc427b7a0929bb75b049805 749 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 167 743 1.9E-198 T 25-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 SMA_RS02245 07200ff02cc427b7a0929bb75b049805 749 Pfam PF00702 haloacid dehalogenase-like hydrolase 433 648 6.7E-48 T 25-04-2016 SMA_RS02245 07200ff02cc427b7a0929bb75b049805 749 SUPERFAMILY SSF55008 3 76 1.22E-18 T 25-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 SMA_RS06140 a70d1f7c1d34dbd90d4c1b6ff594ce30 245 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 1 228 1.4E-93 T 25-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 SMA_RS06140 a70d1f7c1d34dbd90d4c1b6ff594ce30 245 Gene3D G3DSA:1.10.1270.20 155 239 4.0E-35 T 25-04-2016 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 SMA_RS06140 a70d1f7c1d34dbd90d4c1b6ff594ce30 245 PIRSF PIRSF000386 1 245 5.6E-99 T 25-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 SMA_RS06140 a70d1f7c1d34dbd90d4c1b6ff594ce30 245 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 245 107.111 T 25-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 SMA_RS06140 a70d1f7c1d34dbd90d4c1b6ff594ce30 245 PANTHER PTHR32125:SF1 1 222 2.4E-113 T 25-04-2016 SMA_RS06140 a70d1f7c1d34dbd90d4c1b6ff594ce30 245 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 22 215 3.4E-65 T 25-04-2016 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 SMA_RS06140 a70d1f7c1d34dbd90d4c1b6ff594ce30 245 Gene3D G3DSA:3.40.1280.10 1 154 2.7E-61 T 25-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal SMA_RS06140 a70d1f7c1d34dbd90d4c1b6ff594ce30 245 PANTHER PTHR32125 1 222 2.4E-113 T 25-04-2016 SMA_RS06140 a70d1f7c1d34dbd90d4c1b6ff594ce30 245 SUPERFAMILY SSF75217 1 239 4.49E-95 T 25-04-2016 IPR029028 Alpha/beta knot methyltransferases SMA_RS07960 cb7d9f621c3f34a55f79c41787a55414 667 Pfam PF01588 Putative tRNA binding domain 571 664 6.1E-25 T 25-04-2016 IPR002547 tRNA-binding domain GO:0000049 Reactome: REACT_71 SMA_RS07960 cb7d9f621c3f34a55f79c41787a55414 667 Pfam PF09334 tRNA synthetases class I (M) 7 374 5.4E-112 T 25-04-2016 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SMA_RS07960 cb7d9f621c3f34a55f79c41787a55414 667 SUPERFAMILY SSF50249 564 666 1.79E-29 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMA_RS07960 cb7d9f621c3f34a55f79c41787a55414 667 PANTHER PTHR11946 3 623 6.4E-293 T 25-04-2016 SMA_RS07960 cb7d9f621c3f34a55f79c41787a55414 667 Hamap MF_01228 Methionine--tRNA ligase [metG]. 2 521 48.561 T 25-04-2016 IPR023457 Methionine-tRNA synthetase, type 2 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 SMA_RS07960 cb7d9f621c3f34a55f79c41787a55414 667 SUPERFAMILY SSF47323 364 578 2.62E-42 T 25-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SMA_RS07960 cb7d9f621c3f34a55f79c41787a55414 667 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 7 496 5.8E-168 T 25-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 SMA_RS07960 cb7d9f621c3f34a55f79c41787a55414 667 Gene3D G3DSA:1.10.730.10 351 522 7.2E-50 T 25-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SMA_RS07960 cb7d9f621c3f34a55f79c41787a55414 667 Gene3D G3DSA:2.170.220.10 118 236 1.2E-45 T 25-04-2016 SMA_RS07960 cb7d9f621c3f34a55f79c41787a55414 667 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 528 666 2.3E-40 T 25-04-2016 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 SMA_RS07960 cb7d9f621c3f34a55f79c41787a55414 667 Gene3D G3DSA:2.40.50.140 558 666 1.3E-38 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMA_RS07960 cb7d9f621c3f34a55f79c41787a55414 667 PANTHER PTHR11946:SF1 3 623 6.4E-293 T 25-04-2016 SMA_RS07960 cb7d9f621c3f34a55f79c41787a55414 667 SUPERFAMILY SSF52374 4 365 2.36E-104 T 25-04-2016 SMA_RS07960 cb7d9f621c3f34a55f79c41787a55414 667 PRINTS PR01041 Methionyl-tRNA synthetase signature 270 285 1.2E-32 T 25-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 SMA_RS07960 cb7d9f621c3f34a55f79c41787a55414 667 PRINTS PR01041 Methionyl-tRNA synthetase signature 89 100 1.2E-32 T 25-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 SMA_RS07960 cb7d9f621c3f34a55f79c41787a55414 667 PRINTS PR01041 Methionyl-tRNA synthetase signature 235 246 1.2E-32 T 25-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 SMA_RS07960 cb7d9f621c3f34a55f79c41787a55414 667 PRINTS PR01041 Methionyl-tRNA synthetase signature 41 55 1.2E-32 T 25-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 SMA_RS07960 cb7d9f621c3f34a55f79c41787a55414 667 PRINTS PR01041 Methionyl-tRNA synthetase signature 9 22 1.2E-32 T 25-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 SMA_RS07960 cb7d9f621c3f34a55f79c41787a55414 667 PRINTS PR01041 Methionyl-tRNA synthetase signature 362 373 1.2E-32 T 25-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 SMA_RS07960 cb7d9f621c3f34a55f79c41787a55414 667 Gene3D G3DSA:3.40.50.620 4 115 6.6E-74 T 25-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SMA_RS07960 cb7d9f621c3f34a55f79c41787a55414 667 Gene3D G3DSA:3.40.50.620 237 348 6.6E-74 T 25-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SMA_RS03275 e4b740e7075ae72866a5a7ac534ee77e 514 PRINTS PR00315 GTP-binding elongation factor signature 62 70 3.1E-11 T 25-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SMA_RS03275 e4b740e7075ae72866a5a7ac534ee77e 514 PRINTS PR00315 GTP-binding elongation factor signature 98 109 3.1E-11 T 25-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SMA_RS03275 e4b740e7075ae72866a5a7ac534ee77e 514 PRINTS PR00315 GTP-binding elongation factor signature 82 92 3.1E-11 T 25-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SMA_RS03275 e4b740e7075ae72866a5a7ac534ee77e 514 PRINTS PR00315 GTP-binding elongation factor signature 12 25 3.1E-11 T 25-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SMA_RS03275 e4b740e7075ae72866a5a7ac534ee77e 514 PRINTS PR00315 GTP-binding elongation factor signature 134 143 3.1E-11 T 25-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SMA_RS03275 e4b740e7075ae72866a5a7ac534ee77e 514 PRINTS PR01037 Tetracycline resistance protein TetO/TetQ/TetM family signature 120 143 4.5E-9 T 25-04-2016 SMA_RS03275 e4b740e7075ae72866a5a7ac534ee77e 514 PRINTS PR01037 Tetracycline resistance protein TetO/TetQ/TetM family signature 239 261 4.5E-9 T 25-04-2016 SMA_RS03275 e4b740e7075ae72866a5a7ac534ee77e 514 Gene3D G3DSA:3.40.50.300 4 270 4.8E-69 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS03275 e4b740e7075ae72866a5a7ac534ee77e 514 SUPERFAMILY SSF50447 249 379 4.86E-29 T 25-04-2016 IPR009000 Translation protein, beta-barrel domain SMA_RS03275 e4b740e7075ae72866a5a7ac534ee77e 514 SUPERFAMILY SSF54980 383 455 1.8E-16 T 25-04-2016 IPR009022 Elongation factor G, III-V domain SMA_RS03275 e4b740e7075ae72866a5a7ac534ee77e 514 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 55 70 - T 25-04-2016 IPR031157 Tr-type G domain, conserved site SMA_RS03275 e4b740e7075ae72866a5a7ac534ee77e 514 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 12 158 9.2E-21 T 25-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 SMA_RS03275 e4b740e7075ae72866a5a7ac534ee77e 514 PANTHER PTHR23115 1 181 1.3E-232 T 25-04-2016 SMA_RS03275 e4b740e7075ae72866a5a7ac534ee77e 514 PANTHER PTHR23115 239 456 1.3E-232 T 25-04-2016 SMA_RS03275 e4b740e7075ae72866a5a7ac534ee77e 514 PANTHER PTHR23115:SF69 1 181 1.3E-232 T 25-04-2016 SMA_RS03275 e4b740e7075ae72866a5a7ac534ee77e 514 PANTHER PTHR23115:SF69 239 456 1.3E-232 T 25-04-2016 SMA_RS03275 e4b740e7075ae72866a5a7ac534ee77e 514 TIGRFAM TIGR00503 prfC: peptide chain release factor 3 5 511 1.2E-198 T 25-04-2016 IPR004548 Peptide chain release factor 3 GO:0005525|GO:0005737|GO:0006415|GO:0016149 SMA_RS03275 e4b740e7075ae72866a5a7ac534ee77e 514 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 1 514 49.889 T 25-04-2016 IPR004548 Peptide chain release factor 3 GO:0005525|GO:0005737|GO:0006415|GO:0016149 SMA_RS03275 e4b740e7075ae72866a5a7ac534ee77e 514 SUPERFAMILY SSF52540 6 265 8.36E-87 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS03275 e4b740e7075ae72866a5a7ac534ee77e 514 Pfam PF03144 Elongation factor Tu domain 2 303 369 1.7E-13 T 25-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 SMA_RS03275 e4b740e7075ae72866a5a7ac534ee77e 514 Gene3D G3DSA:2.40.30.10 281 383 2.2E-26 T 25-04-2016 SMA_RS03275 e4b740e7075ae72866a5a7ac534ee77e 514 Gene3D G3DSA:3.30.70.870 384 454 1.3E-14 T 25-04-2016 SMA_RS03275 e4b740e7075ae72866a5a7ac534ee77e 514 Pfam PF16658 Class II release factor RF3, C-terminal domain 377 501 1.5E-43 T 25-04-2016 IPR032090 Peptide chain release factor 3, C-terminal SMA_RS03275 e4b740e7075ae72866a5a7ac534ee77e 514 Pfam PF00009 Elongation factor Tu GTP binding domain 9 265 6.2E-51 T 25-04-2016 SMA_RS02210 9b4f76b02038b0d3a1f831b6bafdd72d 98 Pfam PF04296 Protein of unknown function (DUF448) 10 83 7.1E-23 T 25-04-2016 IPR007393 Domain of unknown function DUF448 SMA_RS02210 9b4f76b02038b0d3a1f831b6bafdd72d 98 PANTHER PTHR34215:SF1 1 94 1.7E-30 T 25-04-2016 SMA_RS02210 9b4f76b02038b0d3a1f831b6bafdd72d 98 SUPERFAMILY SSF64376 5 96 8.76E-28 T 25-04-2016 IPR007393 Domain of unknown function DUF448 SMA_RS02210 9b4f76b02038b0d3a1f831b6bafdd72d 98 PANTHER PTHR34215 1 94 1.7E-30 T 25-04-2016 SMA_RS02210 9b4f76b02038b0d3a1f831b6bafdd72d 98 Gene3D G3DSA:3.30.1230.10 2 96 9.8E-33 T 25-04-2016 IPR007393 Domain of unknown function DUF448 SMA_RS03315 869b3a6741790ab958e691f4ccf74918 202 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 163 170 - T 25-04-2016 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SMA_RS03315 869b3a6741790ab958e691f4ccf74918 202 PIRSF PIRSF000349 1 202 2.8E-81 T 25-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SMA_RS03315 869b3a6741790ab958e691f4ccf74918 202 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 95 195 9.6E-42 T 25-04-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SMA_RS03315 869b3a6741790ab958e691f4ccf74918 202 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 5 89 1.2E-30 T 25-04-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SMA_RS03315 869b3a6741790ab958e691f4ccf74918 202 SUPERFAMILY SSF54719 91 201 1.7E-45 T 25-04-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SMA_RS03315 869b3a6741790ab958e691f4ccf74918 202 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 7.9E-27 T 25-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SMA_RS03315 869b3a6741790ab958e691f4ccf74918 202 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 7.9E-27 T 25-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SMA_RS03315 869b3a6741790ab958e691f4ccf74918 202 PRINTS PR01703 Manganese superoxide dismutase signature 161 173 7.9E-27 T 25-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SMA_RS03315 869b3a6741790ab958e691f4ccf74918 202 PRINTS PR01703 Manganese superoxide dismutase signature 124 132 7.9E-27 T 25-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SMA_RS03315 869b3a6741790ab958e691f4ccf74918 202 PRINTS PR01703 Manganese superoxide dismutase signature 72 85 7.9E-27 T 25-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SMA_RS03315 869b3a6741790ab958e691f4ccf74918 202 PANTHER PTHR11404 5 202 1.4E-102 T 25-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SMA_RS03315 869b3a6741790ab958e691f4ccf74918 202 Gene3D G3DSA:1.10.287.990 20 89 1.7E-29 T 25-04-2016 SMA_RS03315 869b3a6741790ab958e691f4ccf74918 202 SUPERFAMILY SSF46609 1 90 2.75E-34 T 25-04-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SMA_RS09035 7b7988045df0dbc33362f170e426db6e 763 PANTHER PTHR11731 437 534 2.3E-52 T 25-04-2016 SMA_RS09035 7b7988045df0dbc33362f170e426db6e 763 PANTHER PTHR11731 265 400 2.3E-52 T 25-04-2016 SMA_RS09035 7b7988045df0dbc33362f170e426db6e 763 PANTHER PTHR11731 169 214 2.3E-52 T 25-04-2016 SMA_RS09035 7b7988045df0dbc33362f170e426db6e 763 SMART SM00939 515 754 6.1E-46 T 25-04-2016 IPR013736 Xaa-Pro dipeptidyl-peptidase, C-terminal GO:0008239 SMA_RS09035 7b7988045df0dbc33362f170e426db6e 763 Pfam PF09168 X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal 1 145 3.1E-46 T 25-04-2016 IPR015251 X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal domain GO:0006508|GO:0008239 SMA_RS09035 7b7988045df0dbc33362f170e426db6e 763 PRINTS PR00923 Lactococcus X-Pro dipeptidyl-peptidase (S15) family signature 507 523 9.9E-37 T 25-04-2016 IPR008252 Peptidase S15, X-Pro dipeptidyl-peptidase GO:0004177|GO:0006508 SMA_RS09035 7b7988045df0dbc33362f170e426db6e 763 PRINTS PR00923 Lactococcus X-Pro dipeptidyl-peptidase (S15) family signature 170 180 9.9E-37 T 25-04-2016 IPR008252 Peptidase S15, X-Pro dipeptidyl-peptidase GO:0004177|GO:0006508 SMA_RS09035 7b7988045df0dbc33362f170e426db6e 763 PRINTS PR00923 Lactococcus X-Pro dipeptidyl-peptidase (S15) family signature 154 166 9.9E-37 T 25-04-2016 IPR008252 Peptidase S15, X-Pro dipeptidyl-peptidase GO:0004177|GO:0006508 SMA_RS09035 7b7988045df0dbc33362f170e426db6e 763 PRINTS PR00923 Lactococcus X-Pro dipeptidyl-peptidase (S15) family signature 722 737 9.9E-37 T 25-04-2016 IPR008252 Peptidase S15, X-Pro dipeptidyl-peptidase GO:0004177|GO:0006508 SMA_RS09035 7b7988045df0dbc33362f170e426db6e 763 PRINTS PR00923 Lactococcus X-Pro dipeptidyl-peptidase (S15) family signature 188 197 9.9E-37 T 25-04-2016 IPR008252 Peptidase S15, X-Pro dipeptidyl-peptidase GO:0004177|GO:0006508 SMA_RS09035 7b7988045df0dbc33362f170e426db6e 763 PRINTS PR00923 Lactococcus X-Pro dipeptidyl-peptidase (S15) family signature 202 218 9.9E-37 T 25-04-2016 IPR008252 Peptidase S15, X-Pro dipeptidyl-peptidase GO:0004177|GO:0006508 SMA_RS09035 7b7988045df0dbc33362f170e426db6e 763 PRINTS PR00923 Lactococcus X-Pro dipeptidyl-peptidase (S15) family signature 372 388 9.9E-37 T 25-04-2016 IPR008252 Peptidase S15, X-Pro dipeptidyl-peptidase GO:0004177|GO:0006508 SMA_RS09035 7b7988045df0dbc33362f170e426db6e 763 Gene3D G3DSA:3.40.50.1820 163 215 1.4E-47 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMA_RS09035 7b7988045df0dbc33362f170e426db6e 763 Gene3D G3DSA:3.40.50.1820 265 382 1.4E-47 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMA_RS09035 7b7988045df0dbc33362f170e426db6e 763 Gene3D G3DSA:3.40.50.1820 456 541 1.4E-47 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMA_RS09035 7b7988045df0dbc33362f170e426db6e 763 SMART SM00940 1 145 8.7E-57 T 25-04-2016 IPR015251 X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal domain GO:0006508|GO:0008239 SMA_RS09035 7b7988045df0dbc33362f170e426db6e 763 Gene3D G3DSA:2.60.120.260 542 638 3.2E-63 T 25-04-2016 IPR008979 Galactose-binding domain-like SMA_RS09035 7b7988045df0dbc33362f170e426db6e 763 Gene3D G3DSA:2.60.120.260 677 757 3.2E-63 T 25-04-2016 IPR008979 Galactose-binding domain-like SMA_RS09035 7b7988045df0dbc33362f170e426db6e 763 SUPERFAMILY SSF49785 551 759 2.98E-74 T 25-04-2016 IPR008979 Galactose-binding domain-like SMA_RS09035 7b7988045df0dbc33362f170e426db6e 763 PANTHER PTHR11731:SF148 437 534 2.3E-52 T 25-04-2016 SMA_RS09035 7b7988045df0dbc33362f170e426db6e 763 PANTHER PTHR11731:SF148 265 400 2.3E-52 T 25-04-2016 SMA_RS09035 7b7988045df0dbc33362f170e426db6e 763 PANTHER PTHR11731:SF148 169 214 2.3E-52 T 25-04-2016 SMA_RS09035 7b7988045df0dbc33362f170e426db6e 763 SUPERFAMILY SSF81761 1 147 1.83E-44 T 25-04-2016 IPR015251 X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal domain GO:0006508|GO:0008239 SMA_RS09035 7b7988045df0dbc33362f170e426db6e 763 Pfam PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain 531 751 7.7E-30 T 25-04-2016 IPR013736 Xaa-Pro dipeptidyl-peptidase, C-terminal GO:0008239 SMA_RS09035 7b7988045df0dbc33362f170e426db6e 763 Pfam PF02129 X-Pro dipeptidyl-peptidase (S15 family) 184 501 6.1E-82 T 25-04-2016 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain GO:0016787 SMA_RS09035 7b7988045df0dbc33362f170e426db6e 763 SUPERFAMILY SSF53474 149 551 1.68E-96 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMA_RS09035 7b7988045df0dbc33362f170e426db6e 763 Hamap MF_00698 Xaa-Pro dipeptidyl-peptidase [pepX]. 1 757 37.195 T 25-04-2016 IPR008252 Peptidase S15, X-Pro dipeptidyl-peptidase GO:0004177|GO:0006508 SMA_RS03235 81e2e82799f5816ee5fdf28013a71b89 173 PIRSF PIRSF037847 1 172 1.3E-65 T 25-04-2016 IPR026043 Transcription repressor NadR SMA_RS03235 81e2e82799f5816ee5fdf28013a71b89 173 Pfam PF08279 HTH domain 6 58 1.3E-13 T 25-04-2016 IPR013196 Helix-turn-helix, type 11 SMA_RS03235 81e2e82799f5816ee5fdf28013a71b89 173 Gene3D G3DSA:1.10.10.10 1 62 1.4E-18 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMA_RS03235 81e2e82799f5816ee5fdf28013a71b89 173 SUPERFAMILY SSF75500 67 171 2.62E-33 T 25-04-2016 IPR004173 3H domain GO:0036094 SMA_RS03235 81e2e82799f5816ee5fdf28013a71b89 173 SUPERFAMILY SSF46785 1 60 1.24E-9 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMA_RS03235 81e2e82799f5816ee5fdf28013a71b89 173 ProDom PD469575 TRANSCRIPTION DNA-BINDING REGULATION TRANSCRIPTIONAL REGULATOR REPRESSOR FAMILY BIOTIN REGULATOR 3H 76 169 1.0E-24 T 25-04-2016 IPR004173 3H domain GO:0036094 SMA_RS03235 81e2e82799f5816ee5fdf28013a71b89 173 Gene3D G3DSA:3.30.1340.20 67 171 1.8E-38 T 25-04-2016 IPR004173 3H domain GO:0036094 SMA_RS03235 81e2e82799f5816ee5fdf28013a71b89 173 PANTHER PTHR40068 1 173 4.9E-51 T 25-04-2016 SMA_RS03235 81e2e82799f5816ee5fdf28013a71b89 173 Pfam PF02829 3H domain 73 169 1.8E-33 T 25-04-2016 IPR004173 3H domain GO:0036094 SMA_RS03905 31670027b2302b9a9a100d4b8f6f2b8d 314 PANTHER PTHR20919:SF0 2 313 5.3E-145 T 25-04-2016 SMA_RS03905 31670027b2302b9a9a100d4b8f6f2b8d 314 PANTHER PTHR20919 2 313 5.3E-145 T 25-04-2016 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46|UniPathway: UPA00051 SMA_RS03905 31670027b2302b9a9a100d4b8f6f2b8d 314 ProDom PD037892 HOMOSERINE O-SUCCINYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIOSYNTHESIS TRANSSUCCINYLASE HTS METHIONINE O- AMINO-ACID 36 289 3.0E-108 T 25-04-2016 SMA_RS03905 31670027b2302b9a9a100d4b8f6f2b8d 314 Pfam PF04204 Homoserine O-succinyltransferase 2 299 4.6E-134 T 25-04-2016 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46|UniPathway: UPA00051 SMA_RS03905 31670027b2302b9a9a100d4b8f6f2b8d 314 Hamap MF_00295 Homoserine O-succinyltransferase [metA]. 1 301 52.943 T 25-04-2016 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46|UniPathway: UPA00051 SMA_RS03905 31670027b2302b9a9a100d4b8f6f2b8d 314 PIRSF PIRSF000450 1 309 7.9E-148 T 25-04-2016 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46|UniPathway: UPA00051 SMA_RS03905 31670027b2302b9a9a100d4b8f6f2b8d 314 TIGRFAM TIGR01001 metA: homoserine O-succinyltransferase 1 302 4.1E-125 T 25-04-2016 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46|UniPathway: UPA00051 SMA_RS03905 31670027b2302b9a9a100d4b8f6f2b8d 314 Gene3D G3DSA:3.40.50.880 34 300 1.7E-119 T 25-04-2016 IPR029062 Class I glutamine amidotransferase-like SMA_RS03905 31670027b2302b9a9a100d4b8f6f2b8d 314 SUPERFAMILY SSF52317 17 297 3.82E-97 T 25-04-2016 IPR029062 Class I glutamine amidotransferase-like SMA_RS04005 7304d8fb3c17174cd236cdf669fcc7eb 285 Pfam PF03466 LysR substrate binding domain 117 250 1.4E-9 T 25-04-2016 IPR005119 LysR, substrate-binding SMA_RS04005 7304d8fb3c17174cd236cdf669fcc7eb 285 Gene3D G3DSA:1.10.10.10 11 86 4.7E-13 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMA_RS04005 7304d8fb3c17174cd236cdf669fcc7eb 285 PANTHER PTHR30126 7 277 1.2E-23 T 25-04-2016 SMA_RS04005 7304d8fb3c17174cd236cdf669fcc7eb 285 Gene3D G3DSA:3.40.190.10 127 220 4.3E-5 T 25-04-2016 SMA_RS04005 7304d8fb3c17174cd236cdf669fcc7eb 285 SUPERFAMILY SSF53850 88 265 9.72E-12 T 25-04-2016 SMA_RS04005 7304d8fb3c17174cd236cdf669fcc7eb 285 SUPERFAMILY SSF46785 7 104 4.54E-11 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMA_RS04005 7304d8fb3c17174cd236cdf669fcc7eb 285 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 66 1.7E-9 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMA_RS05515 2b3eb1388a6f98d7dbf12b7a41552416 178 SUPERFAMILY SSF51161 6 174 5.13E-48 T 25-04-2016 IPR011004 Trimeric LpxA-like SMA_RS05515 2b3eb1388a6f98d7dbf12b7a41552416 178 Gene3D G3DSA:2.160.10.10 9 176 1.8E-55 T 25-04-2016 SMA_RS05515 2b3eb1388a6f98d7dbf12b7a41552416 178 PANTHER PTHR23416 3 178 9.8E-69 T 25-04-2016 SMA_RS05515 2b3eb1388a6f98d7dbf12b7a41552416 178 PANTHER PTHR23416:SF58 3 178 9.8E-69 T 25-04-2016 SMA_RS05515 2b3eb1388a6f98d7dbf12b7a41552416 178 Pfam PF12464 Maltose acetyltransferase 2 47 1.1E-4 T 25-04-2016 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 SMA_RS05515 2b3eb1388a6f98d7dbf12b7a41552416 178 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 128 156 - T 25-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 SMA_RS05515 2b3eb1388a6f98d7dbf12b7a41552416 178 SMART SM01266 1 48 4.4E-4 T 25-04-2016 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 SMA_RS05515 2b3eb1388a6f98d7dbf12b7a41552416 178 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 120 154 1.0E-10 T 25-04-2016 IPR001451 Hexapeptide repeat SMA_RS00795 2305b40f7c7a8ef54bbd3fb21ab42a87 355 PANTHER PTHR32481 1 355 7.2E-154 T 25-04-2016 SMA_RS00795 2305b40f7c7a8ef54bbd3fb21ab42a87 355 TIGRFAM TIGR03107 glu_aminopep: glutamyl aminopeptidase 5 353 4.5E-198 T 25-04-2016 IPR017538 Peptidase M42, glutamyl aminopeptidase MetaCyc: PWY-5706|MetaCyc: PWY-5707|MetaCyc: PWY-7614 SMA_RS00795 2305b40f7c7a8ef54bbd3fb21ab42a87 355 Gene3D G3DSA:2.40.30.40 76 164 8.7E-28 T 25-04-2016 IPR023367 Peptidase M42, domain 2 SMA_RS00795 2305b40f7c7a8ef54bbd3fb21ab42a87 355 SUPERFAMILY SSF101821 71 182 5.8E-26 T 25-04-2016 SMA_RS00795 2305b40f7c7a8ef54bbd3fb21ab42a87 355 Gene3D G3DSA:3.40.630.10 1 74 9.0E-77 T 25-04-2016 SMA_RS00795 2305b40f7c7a8ef54bbd3fb21ab42a87 355 Gene3D G3DSA:3.40.630.10 171 354 9.0E-77 T 25-04-2016 SMA_RS00795 2305b40f7c7a8ef54bbd3fb21ab42a87 355 PIRSF PIRSF001123 1 355 2.9E-133 T 25-04-2016 IPR008007 Peptidase M42 SMA_RS00795 2305b40f7c7a8ef54bbd3fb21ab42a87 355 Pfam PF05343 M42 glutamyl aminopeptidase 45 334 1.2E-97 T 25-04-2016 IPR008007 Peptidase M42 SMA_RS00795 2305b40f7c7a8ef54bbd3fb21ab42a87 355 SUPERFAMILY SSF53187 4 81 1.16E-58 T 25-04-2016 SMA_RS00795 2305b40f7c7a8ef54bbd3fb21ab42a87 355 SUPERFAMILY SSF53187 174 352 1.16E-58 T 25-04-2016 SMA_RS00795 2305b40f7c7a8ef54bbd3fb21ab42a87 355 PANTHER PTHR32481:SF0 1 355 7.2E-154 T 25-04-2016 SMA_RS03985 684aa9524d85f01c2dab2629f00db1a6 558 SUPERFAMILY SSF52518 8 177 1.27E-47 T 25-04-2016 IPR029061 Thiamin diphosphate-binding fold SMA_RS03985 684aa9524d85f01c2dab2629f00db1a6 558 PANTHER PTHR18968 1 556 1.6E-270 T 25-04-2016 SMA_RS03985 684aa9524d85f01c2dab2629f00db1a6 558 Gene3D G3DSA:3.40.50.1220 189 352 9.1E-34 T 25-04-2016 IPR029035 DHS-like NAD/FAD-binding domain SMA_RS03985 684aa9524d85f01c2dab2629f00db1a6 558 TIGRFAM TIGR02418 acolac_catab: acetolactate synthase, catabolic 9 549 1.0E-279 T 25-04-2016 IPR012782 Acetolactate synthase, catabolic GO:0000287|GO:0003984|GO:0030976|GO:0034077 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00626 SMA_RS03985 684aa9524d85f01c2dab2629f00db1a6 558 Gene3D G3DSA:3.40.50.970 361 547 2.0E-61 T 25-04-2016 IPR029061 Thiamin diphosphate-binding fold SMA_RS03985 684aa9524d85f01c2dab2629f00db1a6 558 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 390 538 1.1E-43 T 25-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 SMA_RS03985 684aa9524d85f01c2dab2629f00db1a6 558 Gene3D G3DSA:3.40.50.970 7 178 2.2E-57 T 25-04-2016 IPR029061 Thiamin diphosphate-binding fold SMA_RS03985 684aa9524d85f01c2dab2629f00db1a6 558 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 9 171 4.2E-48 T 25-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 SMA_RS03985 684aa9524d85f01c2dab2629f00db1a6 558 PANTHER PTHR18968:SF129 1 556 1.6E-270 T 25-04-2016 SMA_RS03985 684aa9524d85f01c2dab2629f00db1a6 558 SUPERFAMILY SSF52518 364 548 2.56E-60 T 25-04-2016 IPR029061 Thiamin diphosphate-binding fold SMA_RS03985 684aa9524d85f01c2dab2629f00db1a6 558 SUPERFAMILY SSF52467 188 354 2.86E-34 T 25-04-2016 IPR029035 DHS-like NAD/FAD-binding domain SMA_RS03985 684aa9524d85f01c2dab2629f00db1a6 558 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 427 446 - T 25-04-2016 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 SMA_RS03985 684aa9524d85f01c2dab2629f00db1a6 558 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 195 328 3.7E-26 T 25-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 SMA_RS08940 c07169730531de01d292993e911d7888 286 PANTHER PTHR32179 1 279 9.4E-114 T 25-04-2016 SMA_RS08940 c07169730531de01d292993e911d7888 286 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 15 279 8.2E-96 T 25-04-2016 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|UniPathway: UPA00253 SMA_RS08940 c07169730531de01d292993e911d7888 286 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 114 279 1.0E-56 T 25-04-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 SMA_RS08940 c07169730531de01d292993e911d7888 286 SUPERFAMILY SSF51690 114 279 2.04E-54 T 25-04-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 SMA_RS08940 c07169730531de01d292993e911d7888 286 PIRSF PIRSF006250 6 282 1.3E-89 T 25-04-2016 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD SMA_RS08940 c07169730531de01d292993e911d7888 286 Gene3D G3DSA:3.90.1170.20 6 134 8.8E-45 T 25-04-2016 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 SMA_RS08940 c07169730531de01d292993e911d7888 286 SUPERFAMILY SSF54675 8 113 2.63E-27 T 25-04-2016 SMA_RS08940 c07169730531de01d292993e911d7888 286 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 24 112 2.9E-24 T 25-04-2016 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 SMA_RS08940 c07169730531de01d292993e911d7888 286 Gene3D G3DSA:3.20.20.70 135 270 3.6E-53 T 25-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SMA_RS06145 96840870988ad70a9beee588dc282e21 172 Gene3D G3DSA:2.40.30.60 3 91 1.4E-12 T 25-04-2016 IPR002676 RimM protein GO:0006364 SMA_RS06145 96840870988ad70a9beee588dc282e21 172 Gene3D G3DSA:2.30.30.240 99 168 1.3E-22 T 25-04-2016 SMA_RS06145 96840870988ad70a9beee588dc282e21 172 PANTHER PTHR33692 2 172 1.3E-55 T 25-04-2016 SMA_RS06145 96840870988ad70a9beee588dc282e21 172 Pfam PF01782 RimM N-terminal domain 6 89 1.5E-19 T 25-04-2016 IPR002676 RimM protein GO:0006364 SMA_RS06145 96840870988ad70a9beee588dc282e21 172 PANTHER PTHR33692:SF1 2 172 1.3E-55 T 25-04-2016 SMA_RS06145 96840870988ad70a9beee588dc282e21 172 SUPERFAMILY SSF50447 2 91 7.06E-19 T 25-04-2016 IPR009000 Translation protein, beta-barrel domain SMA_RS06145 96840870988ad70a9beee588dc282e21 172 SUPERFAMILY SSF50346 99 168 4.51E-18 T 25-04-2016 IPR011033 PRC-barrel-like SMA_RS06145 96840870988ad70a9beee588dc282e21 172 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 3 168 23.226 T 25-04-2016 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 SMA_RS06145 96840870988ad70a9beee588dc282e21 172 Pfam PF05239 PRC-barrel domain 97 167 3.7E-11 T 25-04-2016 IPR027275 PRC-barrel domain SMA_RS06145 96840870988ad70a9beee588dc282e21 172 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 4 167 7.1E-49 T 25-04-2016 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 SMA_RS02075 5d8d5b9ef3fdc6300f02fcc628a733e2 456 SUPERFAMILY SSF56059 83 353 8.13E-72 T 25-04-2016 SMA_RS02075 5d8d5b9ef3fdc6300f02fcc628a733e2 456 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 153 167 - T 25-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 SMA_RS02075 5d8d5b9ef3fdc6300f02fcc628a733e2 456 Gene3D G3DSA:3.30.470.20 206 447 7.1E-97 T 25-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 SMA_RS02075 5d8d5b9ef3fdc6300f02fcc628a733e2 456 SUPERFAMILY SSF51246 332 445 1.2E-40 T 25-04-2016 IPR011054 Rudiment single hybrid motif SMA_RS02075 5d8d5b9ef3fdc6300f02fcc628a733e2 456 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 445 1.5E-203 T 25-04-2016 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 SMA_RS02075 5d8d5b9ef3fdc6300f02fcc628a733e2 456 SMART SM00878 337 444 6.8E-57 T 25-04-2016 IPR005482 Biotin carboxylase, C-terminal SMA_RS02075 5d8d5b9ef3fdc6300f02fcc628a733e2 456 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 4.1E-45 T 25-04-2016 IPR005481 Biotin carboxylase-like, N-terminal domain SMA_RS02075 5d8d5b9ef3fdc6300f02fcc628a733e2 456 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 287 294 - T 25-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 SMA_RS02075 5d8d5b9ef3fdc6300f02fcc628a733e2 456 Gene3D G3DSA:3.30.1490.20 130 202 2.1E-29 T 25-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 SMA_RS02075 5d8d5b9ef3fdc6300f02fcc628a733e2 456 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 323 7.8E-75 T 25-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 SMA_RS02075 5d8d5b9ef3fdc6300f02fcc628a733e2 456 SUPERFAMILY SSF52440 1 113 1.08E-48 T 25-04-2016 IPR016185 Pre-ATP-grasp domain SMA_RS02075 5d8d5b9ef3fdc6300f02fcc628a733e2 456 PANTHER PTHR18866 1 445 1.2E-290 T 25-04-2016 SMA_RS02075 5d8d5b9ef3fdc6300f02fcc628a733e2 456 Pfam PF02785 Biotin carboxylase C-terminal domain 337 444 1.7E-38 T 25-04-2016 IPR005482 Biotin carboxylase, C-terminal SMA_RS02075 5d8d5b9ef3fdc6300f02fcc628a733e2 456 Gene3D G3DSA:3.40.50.20 1 129 2.4E-49 T 25-04-2016 IPR016185 Pre-ATP-grasp domain SMA_RS08420 11b0b3b2513456b57ff3b9e8a3e688e9 103 PANTHER PTHR10908 1 102 2.4E-14 T 25-04-2016 SMA_RS08420 11b0b3b2513456b57ff3b9e8a3e688e9 103 SUPERFAMILY SSF55729 1 102 1.3E-12 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMA_RS08420 11b0b3b2513456b57ff3b9e8a3e688e9 103 Gene3D G3DSA:3.40.630.30 1 102 3.7E-18 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMA_RS05630 710aa7bc4f7814d950a8ff5cec8d5f33 225 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 15 113 2.7E-20 T 25-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 SMA_RS05630 710aa7bc4f7814d950a8ff5cec8d5f33 225 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 40 220 4.5E-13 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SMA_RS05630 710aa7bc4f7814d950a8ff5cec8d5f33 225 Gene3D G3DSA:1.10.3720.10 15 223 4.1E-35 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SMA_RS05630 710aa7bc4f7814d950a8ff5cec8d5f33 225 SUPERFAMILY SSF161098 17 215 2.49E-35 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SMA_RS05630 710aa7bc4f7814d950a8ff5cec8d5f33 225 PANTHER PTHR30614 13 221 3.1E-46 T 25-04-2016 SMA_RS09265 99d3174f385d7a5df2862852af419791 435 Gene3D G3DSA:1.10.287.130 216 274 8.8E-4 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMA_RS09265 99d3174f385d7a5df2862852af419791 435 SUPERFAMILY SSF55874 294 430 1.05E-7 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMA_RS09265 99d3174f385d7a5df2862852af419791 435 PANTHER PTHR40448 1 434 6.5E-60 T 25-04-2016 SMA_RS09265 99d3174f385d7a5df2862852af419791 435 PANTHER PTHR40448:SF1 1 434 6.5E-60 T 25-04-2016 SMA_RS09265 99d3174f385d7a5df2862852af419791 435 Gene3D G3DSA:3.30.565.10 294 410 2.9E-4 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMA_RS09265 99d3174f385d7a5df2862852af419791 435 Pfam PF14501 GHKL domain 330 430 1.4E-13 T 25-04-2016 IPR032834 Sensor histidine kinase NatK, C-terminal domain SMA_RS08750 b8afa58f73607c682679b2d72bf9954a 368 SMART SM01005 242 367 4.7E-68 T 25-04-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SMA_RS08750 b8afa58f73607c682679b2d72bf9954a 368 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 37 47 - T 25-04-2016 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SMA_RS08750 b8afa58f73607c682679b2d72bf9954a 368 SUPERFAMILY SSF51419 13 243 3.14E-66 T 25-04-2016 IPR029066 PLP-binding barrel SMA_RS08750 b8afa58f73607c682679b2d72bf9954a 368 Pfam PF01168 Alanine racemase, N-terminal domain 13 228 2.6E-66 T 25-04-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SMA_RS08750 b8afa58f73607c682679b2d72bf9954a 368 SUPERFAMILY SSF50621 237 366 1.81E-49 T 25-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 SMA_RS08750 b8afa58f73607c682679b2d72bf9954a 368 PRINTS PR00992 Alanine racemase signature 295 312 2.5E-68 T 25-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SMA_RS08750 b8afa58f73607c682679b2d72bf9954a 368 PRINTS PR00992 Alanine racemase signature 201 228 2.5E-68 T 25-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SMA_RS08750 b8afa58f73607c682679b2d72bf9954a 368 PRINTS PR00992 Alanine racemase signature 275 290 2.5E-68 T 25-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SMA_RS08750 b8afa58f73607c682679b2d72bf9954a 368 PRINTS PR00992 Alanine racemase signature 32 48 2.5E-68 T 25-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SMA_RS08750 b8afa58f73607c682679b2d72bf9954a 368 PRINTS PR00992 Alanine racemase signature 127 139 2.5E-68 T 25-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SMA_RS08750 b8afa58f73607c682679b2d72bf9954a 368 PRINTS PR00992 Alanine racemase signature 67 85 2.5E-68 T 25-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SMA_RS08750 b8afa58f73607c682679b2d72bf9954a 368 PRINTS PR00992 Alanine racemase signature 349 362 2.5E-68 T 25-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SMA_RS08750 b8afa58f73607c682679b2d72bf9954a 368 PRINTS PR00992 Alanine racemase signature 258 273 2.5E-68 T 25-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SMA_RS08750 b8afa58f73607c682679b2d72bf9954a 368 PRINTS PR00992 Alanine racemase signature 161 172 2.5E-68 T 25-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SMA_RS08750 b8afa58f73607c682679b2d72bf9954a 368 PANTHER PTHR30511:SF0 3 366 2.3E-149 T 25-04-2016 SMA_RS08750 b8afa58f73607c682679b2d72bf9954a 368 Pfam PF00842 Alanine racemase, C-terminal domain 242 366 1.1E-39 T 25-04-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SMA_RS08750 b8afa58f73607c682679b2d72bf9954a 368 PANTHER PTHR30511 3 366 2.3E-149 T 25-04-2016 SMA_RS08750 b8afa58f73607c682679b2d72bf9954a 368 Hamap MF_01201 Alanine racemase. 6 367 35.964 T 25-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SMA_RS08750 b8afa58f73607c682679b2d72bf9954a 368 Gene3D G3DSA:2.40.37.10 222 367 5.2E-58 T 25-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 SMA_RS08750 b8afa58f73607c682679b2d72bf9954a 368 TIGRFAM TIGR00492 alr: alanine racemase 8 366 8.6E-113 T 25-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SMA_RS08750 b8afa58f73607c682679b2d72bf9954a 368 Gene3D G3DSA:3.20.20.10 15 221 4.5E-69 T 25-04-2016 IPR029066 PLP-binding barrel SMA_RS04300 88f835d395e7270e536d4a0aba48efcf 194 PANTHER PTHR42160:SF1 1 194 2.8E-91 T 25-04-2016 SMA_RS04300 88f835d395e7270e536d4a0aba48efcf 194 SUPERFAMILY SSF52141 4 192 1.83E-47 T 25-04-2016 IPR005122 Uracil-DNA glycosylase-like SMA_RS04300 88f835d395e7270e536d4a0aba48efcf 194 Pfam PF03167 Uracil DNA glycosylase superfamily 30 185 2.7E-19 T 25-04-2016 IPR005122 Uracil-DNA glycosylase-like SMA_RS04300 88f835d395e7270e536d4a0aba48efcf 194 SMART SM00987 28 185 5.7E-24 T 25-04-2016 SMA_RS04300 88f835d395e7270e536d4a0aba48efcf 194 Gene3D G3DSA:3.40.470.10 3 193 5.5E-37 T 25-04-2016 IPR005122 Uracil-DNA glycosylase-like SMA_RS04300 88f835d395e7270e536d4a0aba48efcf 194 SMART SM00986 28 185 5.7E-24 T 25-04-2016 IPR005122 Uracil-DNA glycosylase-like SMA_RS04300 88f835d395e7270e536d4a0aba48efcf 194 PANTHER PTHR42160 1 194 2.8E-91 T 25-04-2016 SMA_RS10420 04e092a120e332c1a14d9eca57ca721c 414 PANTHER PTHR11851 245 403 5.2E-19 T 25-04-2016 SMA_RS10420 04e092a120e332c1a14d9eca57ca721c 414 Gene3D G3DSA:3.30.830.10 240 402 5.5E-34 T 25-04-2016 IPR011237 Peptidase M16 domain GO:0046872 SMA_RS10420 04e092a120e332c1a14d9eca57ca721c 414 SUPERFAMILY SSF63411 6 211 4.71E-8 T 25-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 SMA_RS10420 04e092a120e332c1a14d9eca57ca721c 414 Pfam PF05193 Peptidase M16 inactive domain 188 351 3.2E-25 T 25-04-2016 IPR007863 Peptidase M16, C-terminal SMA_RS10420 04e092a120e332c1a14d9eca57ca721c 414 SUPERFAMILY SSF63411 241 403 1.91E-31 T 25-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 SMA_RS10420 04e092a120e332c1a14d9eca57ca721c 414 Gene3D G3DSA:3.30.830.10 1 229 5.1E-68 T 25-04-2016 IPR011237 Peptidase M16 domain GO:0046872 SMA_RS01610 1d34489a882bd79c62d7a2ab757310ba 609 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 307 321 - T 25-04-2016 IPR018181 Heat shock protein 70, conserved site SMA_RS01610 1d34489a882bd79c62d7a2ab757310ba 609 Gene3D G3DSA:1.20.1270.10 502 573 4.7E-18 T 25-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain SMA_RS01610 1d34489a882bd79c62d7a2ab757310ba 609 Gene3D G3DSA:3.30.30.30 39 98 5.2E-12 T 25-04-2016 SMA_RS01610 1d34489a882bd79c62d7a2ab757310ba 609 Gene3D G3DSA:3.30.420.40 165 199 2.1E-34 T 25-04-2016 SMA_RS01610 1d34489a882bd79c62d7a2ab757310ba 609 Gene3D G3DSA:3.30.420.40 289 331 2.1E-34 T 25-04-2016 SMA_RS01610 1d34489a882bd79c62d7a2ab757310ba 609 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 166 179 - T 25-04-2016 IPR018181 Heat shock protein 70, conserved site SMA_RS01610 1d34489a882bd79c62d7a2ab757310ba 609 SUPERFAMILY SSF100920 354 510 1.7E-60 T 25-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain SMA_RS01610 1d34489a882bd79c62d7a2ab757310ba 609 SUPERFAMILY SSF53067 160 351 1.88E-66 T 25-04-2016 SMA_RS01610 1d34489a882bd79c62d7a2ab757310ba 609 SUPERFAMILY SSF100934 477 576 3.53E-11 T 25-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain SMA_RS01610 1d34489a882bd79c62d7a2ab757310ba 609 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 609 36.326 T 25-04-2016 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 SMA_RS01610 1d34489a882bd79c62d7a2ab757310ba 609 PANTHER PTHR19375:SF173 2 608 0.0 T 25-04-2016 SMA_RS01610 1d34489a882bd79c62d7a2ab757310ba 609 PRINTS PR00301 70kDa heat shock protein signature 112 132 5.6E-78 T 25-04-2016 IPR013126 Heat shock protein 70 family SMA_RS01610 1d34489a882bd79c62d7a2ab757310ba 609 PRINTS PR00301 70kDa heat shock protein signature 358 377 5.6E-78 T 25-04-2016 IPR013126 Heat shock protein 70 family SMA_RS01610 1d34489a882bd79c62d7a2ab757310ba 609 PRINTS PR00301 70kDa heat shock protein signature 439 455 5.6E-78 T 25-04-2016 IPR013126 Heat shock protein 70 family SMA_RS01610 1d34489a882bd79c62d7a2ab757310ba 609 PRINTS PR00301 70kDa heat shock protein signature 172 182 5.6E-78 T 25-04-2016 IPR013126 Heat shock protein 70 family SMA_RS01610 1d34489a882bd79c62d7a2ab757310ba 609 PRINTS PR00301 70kDa heat shock protein signature 304 320 5.6E-78 T 25-04-2016 IPR013126 Heat shock protein 70 family SMA_RS01610 1d34489a882bd79c62d7a2ab757310ba 609 PRINTS PR00301 70kDa heat shock protein signature 31 43 5.6E-78 T 25-04-2016 IPR013126 Heat shock protein 70 family SMA_RS01610 1d34489a882bd79c62d7a2ab757310ba 609 PRINTS PR00301 70kDa heat shock protein signature 3 16 5.6E-78 T 25-04-2016 IPR013126 Heat shock protein 70 family SMA_RS01610 1d34489a882bd79c62d7a2ab757310ba 609 PRINTS PR00301 70kDa heat shock protein signature 335 355 5.6E-78 T 25-04-2016 IPR013126 Heat shock protein 70 family SMA_RS01610 1d34489a882bd79c62d7a2ab757310ba 609 PRINTS PR00301 70kDa heat shock protein signature 53 61 5.6E-78 T 25-04-2016 IPR013126 Heat shock protein 70 family SMA_RS01610 1d34489a882bd79c62d7a2ab757310ba 609 PANTHER PTHR19375 2 608 0.0 T 25-04-2016 SMA_RS01610 1d34489a882bd79c62d7a2ab757310ba 609 Gene3D G3DSA:3.90.640.10 200 285 4.2E-31 T 25-04-2016 SMA_RS01610 1d34489a882bd79c62d7a2ab757310ba 609 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 573 7.7E-284 T 25-04-2016 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 SMA_RS01610 1d34489a882bd79c62d7a2ab757310ba 609 Gene3D G3DSA:2.60.34.10 360 501 1.0E-70 T 25-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain SMA_RS01610 1d34489a882bd79c62d7a2ab757310ba 609 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 25-04-2016 IPR018181 Heat shock protein 70, conserved site SMA_RS01610 1d34489a882bd79c62d7a2ab757310ba 609 Gene3D G3DSA:3.30.420.40 3 38 2.3E-58 T 25-04-2016 SMA_RS01610 1d34489a882bd79c62d7a2ab757310ba 609 Gene3D G3DSA:3.30.420.40 99 164 2.3E-58 T 25-04-2016 SMA_RS01610 1d34489a882bd79c62d7a2ab757310ba 609 Pfam PF00012 Hsp70 protein 4 74 1.0E-24 T 25-04-2016 IPR013126 Heat shock protein 70 family SMA_RS01610 1d34489a882bd79c62d7a2ab757310ba 609 Pfam PF00012 Hsp70 protein 76 573 4.0E-216 T 25-04-2016 IPR013126 Heat shock protein 70 family SMA_RS01610 1d34489a882bd79c62d7a2ab757310ba 609 SUPERFAMILY SSF53067 1 157 2.04E-56 T 25-04-2016 SMA_RS06955 df6caf99e16c0bf495309e12ed6ec6d8 782 SUPERFAMILY SSF52540 401 763 2.5E-25 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS06955 df6caf99e16c0bf495309e12ed6ec6d8 782 Gene3D G3DSA:3.40.50.300 598 743 9.8E-15 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS06955 df6caf99e16c0bf495309e12ed6ec6d8 782 Gene3D G3DSA:3.40.50.300 435 520 9.8E-15 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS01640 89b658cd230597becc1d728e9f98781c 280 PANTHER PTHR30460 1 269 4.3E-67 T 25-04-2016 SMA_RS01640 89b658cd230597becc1d728e9f98781c 280 Gene3D G3DSA:2.30.30.60 130 172 2.3E-13 T 25-04-2016 SMA_RS01640 89b658cd230597becc1d728e9f98781c 280 Pfam PF00924 Mechanosensitive ion channel 72 268 1.2E-40 T 25-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 SMA_RS01640 89b658cd230597becc1d728e9f98781c 280 SUPERFAMILY SSF50182 115 175 4.9E-13 T 25-04-2016 IPR010920 LSM domain SMA_RS01640 89b658cd230597becc1d728e9f98781c 280 SUPERFAMILY SSF82861 25 113 5.49E-15 T 25-04-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 SMA_RS03620 de2d19e0f2e87245e01235820711890d 361 PANTHER PTHR24031 10 337 2.5E-91 T 25-04-2016 SMA_RS03620 de2d19e0f2e87245e01235820711890d 361 Gene3D G3DSA:3.40.50.300 196 350 7.4E-36 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS03620 de2d19e0f2e87245e01235820711890d 361 SMART SM00487 17 207 5.1E-42 T 25-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain SMA_RS03620 de2d19e0f2e87245e01235820711890d 361 SMART SM00490 242 323 9.1E-20 T 25-04-2016 IPR001650 Helicase, C-terminal SMA_RS03620 de2d19e0f2e87245e01235820711890d 361 Pfam PF00270 DEAD/DEAH box helicase 22 182 1.6E-38 T 25-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 SMA_RS03620 de2d19e0f2e87245e01235820711890d 361 Pfam PF00271 Helicase conserved C-terminal domain 232 323 7.6E-19 T 25-04-2016 IPR001650 Helicase, C-terminal SMA_RS03620 de2d19e0f2e87245e01235820711890d 361 SUPERFAMILY SSF52540 66 337 2.93E-56 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS03620 de2d19e0f2e87245e01235820711890d 361 Gene3D G3DSA:3.40.50.300 5 195 3.9E-50 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS07475 8de23f3cc7194501ab7842cfb7d3bd85 302 Pfam PF13419 Haloacid dehalogenase-like hydrolase 5 202 7.2E-25 T 25-04-2016 IPR023214 HAD-like domain SMA_RS07475 8de23f3cc7194501ab7842cfb7d3bd85 302 PANTHER PTHR12725 2 267 2.4E-40 T 25-04-2016 SMA_RS07475 8de23f3cc7194501ab7842cfb7d3bd85 302 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 96 197 1.8E-15 T 25-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SMA_RS07475 8de23f3cc7194501ab7842cfb7d3bd85 302 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 113 126 7.2E-8 T 25-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SMA_RS07475 8de23f3cc7194501ab7842cfb7d3bd85 302 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 2 13 7.2E-8 T 25-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SMA_RS07475 8de23f3cc7194501ab7842cfb7d3bd85 302 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 164 184 7.2E-8 T 25-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SMA_RS07475 8de23f3cc7194501ab7842cfb7d3bd85 302 Gene3D G3DSA:3.40.50.1000 90 233 8.9E-36 T 25-04-2016 IPR023214 HAD-like domain SMA_RS07475 8de23f3cc7194501ab7842cfb7d3bd85 302 PANTHER PTHR12725:SF78 2 267 2.4E-40 T 25-04-2016 SMA_RS07475 8de23f3cc7194501ab7842cfb7d3bd85 302 SUPERFAMILY SSF56784 1 232 4.07E-42 T 25-04-2016 IPR023214 HAD-like domain SMA_RS03300 3afc618659994164686afcdd46dfad07 221 Gene3D G3DSA:1.10.150.320 151 220 2.6E-24 T 25-04-2016 SMA_RS03300 3afc618659994164686afcdd46dfad07 221 SMART SM00278 168 187 0.3 T 25-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 SMA_RS03300 3afc618659994164686afcdd46dfad07 221 SMART SM00278 198 217 0.3 T 25-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 SMA_RS03300 3afc618659994164686afcdd46dfad07 221 TIGRFAM TIGR00426 TIGR00426: competence protein ComEA helix-hairpin-helix repeat region 157 220 3.7E-23 T 25-04-2016 IPR004509 Competence protein ComEA, helix-hairpin-helix domain SMA_RS03300 3afc618659994164686afcdd46dfad07 221 Pfam PF10531 SLBB domain 78 131 5.4E-14 T 25-04-2016 IPR019554 Soluble ligand binding domain SMA_RS03300 3afc618659994164686afcdd46dfad07 221 SUPERFAMILY SSF47781 144 220 2.33E-31 T 25-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 SMA_RS03300 3afc618659994164686afcdd46dfad07 221 Gene3D G3DSA:3.10.560.10 71 121 5.0E-10 T 25-04-2016 SMA_RS03300 3afc618659994164686afcdd46dfad07 221 Pfam PF12836 Helix-hairpin-helix motif 157 219 4.7E-24 T 25-04-2016 SMA_RS03300 3afc618659994164686afcdd46dfad07 221 PANTHER PTHR21180 76 221 9.7E-41 T 25-04-2016 SMA_RS02060 705411ef57c3cc97942288e1f488f459 410 Gene3D G3DSA:3.40.47.10 4 259 4.9E-72 T 25-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SMA_RS02060 705411ef57c3cc97942288e1f488f459 410 SUPERFAMILY SSF53901 214 408 5.76E-66 T 25-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SMA_RS02060 705411ef57c3cc97942288e1f488f459 410 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 4 406 3.9E-171 T 25-04-2016 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 UniPathway: UPA00094 SMA_RS02060 705411ef57c3cc97942288e1f488f459 410 SMART SM00825 Beta-ketoacyl synthase 6 399 8.9E-14 T 25-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain SMA_RS02060 705411ef57c3cc97942288e1f488f459 410 PIRSF PIRSF000447 1 410 1.2E-177 T 25-04-2016 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 UniPathway: UPA00094 SMA_RS02060 705411ef57c3cc97942288e1f488f459 410 PANTHER PTHR11712 5 409 2.0E-174 T 25-04-2016 SMA_RS02060 705411ef57c3cc97942288e1f488f459 410 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 4 246 2.4E-56 T 25-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal SMA_RS02060 705411ef57c3cc97942288e1f488f459 410 Gene3D G3DSA:3.40.47.10 263 409 1.1E-55 T 25-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SMA_RS02060 705411ef57c3cc97942288e1f488f459 410 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 155 171 - T 25-04-2016 IPR018201 Beta-ketoacyl synthase, active site SMA_RS02060 705411ef57c3cc97942288e1f488f459 410 SUPERFAMILY SSF53901 2 251 6.69E-72 T 25-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SMA_RS02060 705411ef57c3cc97942288e1f488f459 410 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 254 364 8.0E-34 T 25-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal SMA_RS09750 bf236ece20aa9b49317e5798e6d22fd4 1114 Pfam PF12385 Papain-like cysteine protease AvrRpt2 938 1081 1.5E-6 T 25-04-2016 IPR022118 Peptidase C70, AvrRpt2 KEGG: 00900+3.4.22.- SMA_RS09750 bf236ece20aa9b49317e5798e6d22fd4 1114 Pfam PF08481 GBS Bsp-like repeat 200 257 3.4E-11 T 25-04-2016 IPR013688 GBS Bsp-like SMA_RS09750 bf236ece20aa9b49317e5798e6d22fd4 1114 Pfam PF08481 GBS Bsp-like repeat 388 445 1.1E-7 T 25-04-2016 IPR013688 GBS Bsp-like SMA_RS09750 bf236ece20aa9b49317e5798e6d22fd4 1114 Pfam PF08481 GBS Bsp-like repeat 643 719 2.2E-25 T 25-04-2016 IPR013688 GBS Bsp-like SMA_RS09750 bf236ece20aa9b49317e5798e6d22fd4 1114 Pfam PF08481 GBS Bsp-like repeat 848 931 2.3E-16 T 25-04-2016 IPR013688 GBS Bsp-like SMA_RS09750 bf236ece20aa9b49317e5798e6d22fd4 1114 Pfam PF08481 GBS Bsp-like repeat 267 355 1.1E-25 T 25-04-2016 IPR013688 GBS Bsp-like SMA_RS09750 bf236ece20aa9b49317e5798e6d22fd4 1114 Pfam PF08481 GBS Bsp-like repeat 456 542 2.1E-26 T 25-04-2016 IPR013688 GBS Bsp-like SMA_RS09750 bf236ece20aa9b49317e5798e6d22fd4 1114 Pfam PF08481 GBS Bsp-like repeat 577 633 3.8E-7 T 25-04-2016 IPR013688 GBS Bsp-like SMA_RS09750 bf236ece20aa9b49317e5798e6d22fd4 1114 Pfam PF08481 GBS Bsp-like repeat 747 835 1.9E-20 T 25-04-2016 IPR013688 GBS Bsp-like SMA_RS02320 b881c3aefcbdc3d12c76cf48817d1b2e 661 PANTHER PTHR11624:SF1 3 315 0.0 T 25-04-2016 SMA_RS02320 b881c3aefcbdc3d12c76cf48817d1b2e 661 PANTHER PTHR11624:SF1 339 656 0.0 T 25-04-2016 SMA_RS02320 b881c3aefcbdc3d12c76cf48817d1b2e 661 SUPERFAMILY SSF52922 533 660 7.99E-38 T 25-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 SMA_RS02320 b881c3aefcbdc3d12c76cf48817d1b2e 661 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 6 334 4.1E-149 T 25-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 SMA_RS02320 b881c3aefcbdc3d12c76cf48817d1b2e 661 SUPERFAMILY SSF52518 341 524 3.28E-65 T 25-04-2016 IPR029061 Thiamin diphosphate-binding fold SMA_RS02320 b881c3aefcbdc3d12c76cf48817d1b2e 661 Gene3D G3DSA:3.40.50.920 537 658 1.4E-42 T 25-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 SMA_RS02320 b881c3aefcbdc3d12c76cf48817d1b2e 661 Gene3D G3DSA:3.40.50.970 329 532 4.7E-73 T 25-04-2016 IPR029061 Thiamin diphosphate-binding fold SMA_RS02320 b881c3aefcbdc3d12c76cf48817d1b2e 661 Pfam PF02779 Transketolase, pyrimidine binding domain 352 522 2.3E-43 T 25-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain SMA_RS02320 b881c3aefcbdc3d12c76cf48817d1b2e 661 Pfam PF02780 Transketolase, C-terminal domain 552 652 2.1E-9 T 25-04-2016 IPR033248 Transketolase, C-terminal domain SMA_RS02320 b881c3aefcbdc3d12c76cf48817d1b2e 661 ProSitePatterns PS00802 Transketolase signature 2. 465 481 - T 25-04-2016 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 SMA_RS02320 b881c3aefcbdc3d12c76cf48817d1b2e 661 Gene3D G3DSA:3.40.50.970 6 327 1.9E-123 T 25-04-2016 IPR029061 Thiamin diphosphate-binding fold SMA_RS02320 b881c3aefcbdc3d12c76cf48817d1b2e 661 SUPERFAMILY SSF52518 6 326 5.47E-116 T 25-04-2016 IPR029061 Thiamin diphosphate-binding fold SMA_RS02320 b881c3aefcbdc3d12c76cf48817d1b2e 661 ProSitePatterns PS00801 Transketolase signature 1. 15 35 - T 25-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 SMA_RS02320 b881c3aefcbdc3d12c76cf48817d1b2e 661 PANTHER PTHR11624 3 315 0.0 T 25-04-2016 IPR033247 Transketolase family SMA_RS02320 b881c3aefcbdc3d12c76cf48817d1b2e 661 PANTHER PTHR11624 339 656 0.0 T 25-04-2016 IPR033247 Transketolase family SMA_RS02320 b881c3aefcbdc3d12c76cf48817d1b2e 661 TIGRFAM TIGR00232 tktlase_bact: transketolase 10 659 1.0E-278 T 25-04-2016 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 SMA_RS02320 b881c3aefcbdc3d12c76cf48817d1b2e 661 SMART SM00861 352 523 1.4E-64 T 25-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain SMA_RS03130 dd33d8376fe4c6922976a5045d57b124 278 Gene3D G3DSA:3.40.1190.20 6 277 1.2E-73 T 25-04-2016 IPR029056 Ribokinase-like SMA_RS03130 dd33d8376fe4c6922976a5045d57b124 278 PANTHER PTHR12592:SF0 1 278 1.2E-58 T 25-04-2016 SMA_RS03130 dd33d8376fe4c6922976a5045d57b124 278 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 4 277 22.027 T 25-04-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 SMA_RS03130 dd33d8376fe4c6922976a5045d57b124 278 SUPERFAMILY SSF53613 4 274 4.44E-61 T 25-04-2016 IPR029056 Ribokinase-like SMA_RS03130 dd33d8376fe4c6922976a5045d57b124 278 ProSitePatterns PS01049 YjeF C-terminal domain signature 1. 94 104 - T 25-04-2016 IPR017953 Carbohydrate kinase, predicted, conserved site SMA_RS03130 dd33d8376fe4c6922976a5045d57b124 278 PANTHER PTHR12592 1 278 1.2E-58 T 25-04-2016 SMA_RS03130 dd33d8376fe4c6922976a5045d57b124 278 Pfam PF01256 Carbohydrate kinase 27 270 2.7E-63 T 25-04-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 SMA_RS03130 dd33d8376fe4c6922976a5045d57b124 278 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 8 273 5.8E-55 T 25-04-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 SMA_RS10410 e6cf60149adc0fe42131112840293e46 314 PANTHER PTHR34475:SF1 1 73 7.9E-12 T 25-04-2016 SMA_RS10410 e6cf60149adc0fe42131112840293e46 314 Gene3D G3DSA:1.10.260.40 5 91 7.3E-8 T 25-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SMA_RS10410 e6cf60149adc0fe42131112840293e46 314 PANTHER PTHR34475 1 73 7.9E-12 T 25-04-2016 SMA_RS10410 e6cf60149adc0fe42131112840293e46 314 Pfam PF13413 Helix-turn-helix domain 10 68 3.9E-13 T 25-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SMA_RS04620 c90b572f911f98f0de1c6bf5b750ab15 282 PIRSF PIRSF006779 1 278 3.5E-95 T 25-04-2016 IPR002747 SAM-dependent chlorinase/fluorinase SMA_RS04620 c90b572f911f98f0de1c6bf5b750ab15 282 Gene3D G3DSA:2.40.30.90 170 276 7.6E-25 T 25-04-2016 IPR023227 S-adenosyl-l-methionine hydroxide adenosyltransferase, C-terminal SMA_RS04620 c90b572f911f98f0de1c6bf5b750ab15 282 SUPERFAMILY SSF102522 4 167 2.22E-52 T 25-04-2016 IPR023228 S-adenosyl-l-methionine hydroxide adenosyltransferase, N-terminal SMA_RS04620 c90b572f911f98f0de1c6bf5b750ab15 282 SUPERFAMILY SSF101852 170 276 3.01E-27 T 25-04-2016 IPR023227 S-adenosyl-l-methionine hydroxide adenosyltransferase, C-terminal SMA_RS04620 c90b572f911f98f0de1c6bf5b750ab15 282 PANTHER PTHR35092 2 282 1.4E-172 T 25-04-2016 SMA_RS04620 c90b572f911f98f0de1c6bf5b750ab15 282 Pfam PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase 6 273 7.1E-66 T 25-04-2016 IPR002747 SAM-dependent chlorinase/fluorinase SMA_RS04620 c90b572f911f98f0de1c6bf5b750ab15 282 PANTHER PTHR35092:SF2 2 282 1.4E-172 T 25-04-2016 SMA_RS03850 6e60e5ea5d3a1526e1ff9dee53e19dde 412 Pfam PF16360 GTP-binding GTPase Middle Region 115 193 2.5E-29 T 25-04-2016 IPR032305 GTP-binding protein, middle domain SMA_RS03850 6e60e5ea5d3a1526e1ff9dee53e19dde 412 Pfam PF01926 50S ribosome-binding GTPase 200 319 8.8E-18 T 25-04-2016 IPR006073 GTP binding domain GO:0005525 SMA_RS03850 6e60e5ea5d3a1526e1ff9dee53e19dde 412 Gene3D G3DSA:3.40.50.300 199 352 8.3E-31 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS03850 6e60e5ea5d3a1526e1ff9dee53e19dde 412 Pfam PF13167 GTP-binding GTPase N-terminal 26 113 4.2E-32 T 25-04-2016 IPR025121 GTPase HflX, N-terminal SMA_RS03850 6e60e5ea5d3a1526e1ff9dee53e19dde 412 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 10 351 4.7E-134 T 25-04-2016 IPR016496 GTPase HflX GO:0005525 SMA_RS03850 6e60e5ea5d3a1526e1ff9dee53e19dde 412 PANTHER PTHR10229 1 400 1.1E-139 T 25-04-2016 IPR016496 GTPase HflX GO:0005525 SMA_RS03850 6e60e5ea5d3a1526e1ff9dee53e19dde 412 SUPERFAMILY SSF52540 199 358 8.4E-34 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS03850 6e60e5ea5d3a1526e1ff9dee53e19dde 412 Hamap MF_00900 GTPase HflX [hflX]. 28 384 42.668 T 25-04-2016 IPR016496 GTPase HflX GO:0005525 SMA_RS03850 6e60e5ea5d3a1526e1ff9dee53e19dde 412 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 201 221 5.9E-8 T 25-04-2016 IPR006073 GTP binding domain GO:0005525 SMA_RS03850 6e60e5ea5d3a1526e1ff9dee53e19dde 412 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 268 286 5.9E-8 T 25-04-2016 IPR006073 GTP binding domain GO:0005525 SMA_RS03850 6e60e5ea5d3a1526e1ff9dee53e19dde 412 PIRSF PIRSF006809 2 412 8.0E-141 T 25-04-2016 IPR016496 GTPase HflX GO:0005525 SMA_RS02400 ac0f07af97e36cf8f901677fea42340e 304 Gene3D G3DSA:3.50.50.60 114 235 2.4E-36 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMA_RS02400 ac0f07af97e36cf8f901677fea42340e 304 Gene3D G3DSA:3.50.50.60 1 113 1.1E-31 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMA_RS02400 ac0f07af97e36cf8f901677fea42340e 304 PANTHER PTHR22912:SF48 1 304 2.7E-131 T 25-04-2016 SMA_RS02400 ac0f07af97e36cf8f901677fea42340e 304 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 56 66 7.1E-68 T 25-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SMA_RS02400 ac0f07af97e36cf8f901677fea42340e 304 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 190 206 7.1E-68 T 25-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SMA_RS02400 ac0f07af97e36cf8f901677fea42340e 304 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 36 51 7.1E-68 T 25-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SMA_RS02400 ac0f07af97e36cf8f901677fea42340e 304 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 123 135 7.1E-68 T 25-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SMA_RS02400 ac0f07af97e36cf8f901677fea42340e 304 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 101 109 7.1E-68 T 25-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SMA_RS02400 ac0f07af97e36cf8f901677fea42340e 304 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 3 25 7.1E-68 T 25-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SMA_RS02400 ac0f07af97e36cf8f901677fea42340e 304 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 263 281 7.1E-68 T 25-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SMA_RS02400 ac0f07af97e36cf8f901677fea42340e 304 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 229 250 7.1E-68 T 25-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SMA_RS02400 ac0f07af97e36cf8f901677fea42340e 304 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 138 162 7.1E-68 T 25-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SMA_RS02400 ac0f07af97e36cf8f901677fea42340e 304 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 142 160 6.3E-34 T 25-04-2016 SMA_RS02400 ac0f07af97e36cf8f901677fea42340e 304 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 100 118 6.3E-34 T 25-04-2016 SMA_RS02400 ac0f07af97e36cf8f901677fea42340e 304 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 227 243 6.3E-34 T 25-04-2016 SMA_RS02400 ac0f07af97e36cf8f901677fea42340e 304 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 253 275 6.3E-34 T 25-04-2016 SMA_RS02400 ac0f07af97e36cf8f901677fea42340e 304 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 6.3E-34 T 25-04-2016 SMA_RS02400 ac0f07af97e36cf8f901677fea42340e 304 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 2 289 2.3E-48 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMA_RS02400 ac0f07af97e36cf8f901677fea42340e 304 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 130 150 - T 25-04-2016 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 SMA_RS02400 ac0f07af97e36cf8f901677fea42340e 304 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 2 300 4.4E-113 T 25-04-2016 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00240+1.8.1.9|KEGG: 00450+1.8.1.9 SMA_RS02400 ac0f07af97e36cf8f901677fea42340e 304 PANTHER PTHR22912 1 304 2.7E-131 T 25-04-2016 SMA_RS02400 ac0f07af97e36cf8f901677fea42340e 304 SUPERFAMILY SSF51905 1 300 4.98E-54 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMA_RS08740 a9b3096d75989cecb49a837941cbece8 418 PANTHER PTHR33498:SF1 1 414 9.0E-110 T 25-04-2016 SMA_RS08740 a9b3096d75989cecb49a837941cbece8 418 PANTHER PTHR33498 1 414 9.0E-110 T 25-04-2016 SMA_RS08740 a9b3096d75989cecb49a837941cbece8 418 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 40 85 2.8E-10 T 25-04-2016 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger SMA_RS08740 a9b3096d75989cecb49a837941cbece8 418 Pfam PF01610 Transposase 154 400 1.1E-51 T 25-04-2016 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain SMA_RS08740 a9b3096d75989cecb49a837941cbece8 418 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 92 141 9.9E-11 T 25-04-2016 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain SMA_RS00905 a9b3096d75989cecb49a837941cbece8 418 PANTHER PTHR33498:SF1 1 414 9.0E-110 T 25-04-2016 SMA_RS00905 a9b3096d75989cecb49a837941cbece8 418 PANTHER PTHR33498 1 414 9.0E-110 T 25-04-2016 SMA_RS00905 a9b3096d75989cecb49a837941cbece8 418 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 40 85 2.8E-10 T 25-04-2016 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger SMA_RS00905 a9b3096d75989cecb49a837941cbece8 418 Pfam PF01610 Transposase 154 400 1.1E-51 T 25-04-2016 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain SMA_RS00905 a9b3096d75989cecb49a837941cbece8 418 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 92 141 9.9E-11 T 25-04-2016 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain SMA_RS01725 83477b5958566cc1917f67b7c7e5904a 634 Pfam PF00122 E1-E2 ATPase 95 316 5.9E-54 T 25-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 SMA_RS01725 83477b5958566cc1917f67b7c7e5904a 634 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 75 622 2.3E-167 T 25-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 SMA_RS01725 83477b5958566cc1917f67b7c7e5904a 634 Pfam PF00702 haloacid dehalogenase-like hydrolase 323 534 9.5E-33 T 25-04-2016 SMA_RS01725 83477b5958566cc1917f67b7c7e5904a 634 ProSitePatterns PS01229 Hypothetical cof family signature 2. 520 542 - T 25-04-2016 SMA_RS01725 83477b5958566cc1917f67b7c7e5904a 634 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 97 597 4.5E-83 T 25-04-2016 IPR001757 P-type ATPase GO:0016021 SMA_RS01725 83477b5958566cc1917f67b7c7e5904a 634 Gene3D G3DSA:3.40.50.1000 447 585 7.4E-45 T 25-04-2016 IPR023214 HAD-like domain SMA_RS01725 83477b5958566cc1917f67b7c7e5904a 634 Gene3D G3DSA:3.40.50.1000 299 339 7.4E-45 T 25-04-2016 IPR023214 HAD-like domain SMA_RS01725 83477b5958566cc1917f67b7c7e5904a 634 SUPERFAMILY SSF56784 417 620 7.07E-53 T 25-04-2016 IPR023214 HAD-like domain SMA_RS01725 83477b5958566cc1917f67b7c7e5904a 634 SUPERFAMILY SSF56784 325 344 7.07E-53 T 25-04-2016 IPR023214 HAD-like domain SMA_RS01725 83477b5958566cc1917f67b7c7e5904a 634 Gene3D G3DSA:3.40.1110.10 340 446 4.3E-13 T 25-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 SMA_RS01725 83477b5958566cc1917f67b7c7e5904a 634 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 175 189 3.0E-28 T 25-04-2016 SMA_RS01725 83477b5958566cc1917f67b7c7e5904a 634 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 467 477 3.0E-28 T 25-04-2016 SMA_RS01725 83477b5958566cc1917f67b7c7e5904a 634 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 543 555 3.0E-28 T 25-04-2016 SMA_RS01725 83477b5958566cc1917f67b7c7e5904a 634 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 520 539 3.0E-28 T 25-04-2016 SMA_RS01725 83477b5958566cc1917f67b7c7e5904a 634 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 326 340 3.0E-28 T 25-04-2016 SMA_RS01725 83477b5958566cc1917f67b7c7e5904a 634 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 445 456 3.0E-28 T 25-04-2016 SMA_RS01725 83477b5958566cc1917f67b7c7e5904a 634 SUPERFAMILY SSF81665 72 128 1.03E-9 T 25-04-2016 SMA_RS01725 83477b5958566cc1917f67b7c7e5904a 634 SUPERFAMILY SSF81665 226 316 1.03E-9 T 25-04-2016 SMA_RS01725 83477b5958566cc1917f67b7c7e5904a 634 Gene3D G3DSA:2.70.150.10 76 226 5.3E-27 T 25-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 SMA_RS01725 83477b5958566cc1917f67b7c7e5904a 634 PANTHER PTHR24093:SF317 21 607 9.2E-169 T 25-04-2016 SMA_RS01725 83477b5958566cc1917f67b7c7e5904a 634 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 328 334 - T 25-04-2016 IPR018303 P-type ATPase, phosphorylation site SMA_RS01725 83477b5958566cc1917f67b7c7e5904a 634 PANTHER PTHR24093 21 607 9.2E-169 T 25-04-2016 SMA_RS01725 83477b5958566cc1917f67b7c7e5904a 634 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 551 576 7.0E-9 T 25-04-2016 IPR001757 P-type ATPase GO:0016021 SMA_RS01725 83477b5958566cc1917f67b7c7e5904a 634 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 492 508 7.0E-9 T 25-04-2016 IPR001757 P-type ATPase GO:0016021 SMA_RS01725 83477b5958566cc1917f67b7c7e5904a 634 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 520 536 7.0E-9 T 25-04-2016 IPR001757 P-type ATPase GO:0016021 SMA_RS01725 83477b5958566cc1917f67b7c7e5904a 634 SUPERFAMILY SSF81653 131 225 2.22E-22 T 25-04-2016 SMA_RS06485 0192e50073842c70a3d4b8775fa14178 384 SUPERFAMILY SSF53756 5 380 9.42E-24 T 25-04-2016 SMA_RS06485 0192e50073842c70a3d4b8775fa14178 384 Pfam PF09314 Domain of unknown function (DUF1972) 1 185 3.8E-97 T 25-04-2016 IPR015393 Domain of unknown function DUF1972 SMA_RS09420 c44e8fa549b8309e719fff69cd90f306 293 Gene3D G3DSA:1.10.10.10 1 84 1.1E-20 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMA_RS09420 c44e8fa549b8309e719fff69cd90f306 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 63 1.8E-14 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMA_RS09420 c44e8fa549b8309e719fff69cd90f306 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.3E-5 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMA_RS09420 c44e8fa549b8309e719fff69cd90f306 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.3E-5 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMA_RS09420 c44e8fa549b8309e719fff69cd90f306 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.3E-5 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMA_RS09420 c44e8fa549b8309e719fff69cd90f306 293 PANTHER PTHR30419 1 292 7.1E-48 T 25-04-2016 SMA_RS09420 c44e8fa549b8309e719fff69cd90f306 293 Pfam PF03466 LysR substrate binding domain 93 290 3.8E-28 T 25-04-2016 IPR005119 LysR, substrate-binding SMA_RS09420 c44e8fa549b8309e719fff69cd90f306 293 SUPERFAMILY SSF53850 88 290 3.86E-26 T 25-04-2016 SMA_RS09420 c44e8fa549b8309e719fff69cd90f306 293 Gene3D G3DSA:3.40.190.10 174 261 4.3E-19 T 25-04-2016 SMA_RS09420 c44e8fa549b8309e719fff69cd90f306 293 SUPERFAMILY SSF46785 1 86 6.53E-16 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMA_RS09420 c44e8fa549b8309e719fff69cd90f306 293 Gene3D G3DSA:3.40.190.10 93 173 2.7E-9 T 25-04-2016 SMA_RS03420 935c40f8d5c9bec1a181c88eed6f0630 185 PANTHER PTHR10204 3 168 1.9E-35 T 25-04-2016 SMA_RS03420 935c40f8d5c9bec1a181c88eed6f0630 185 SUPERFAMILY SSF52218 1 179 2.19E-37 T 25-04-2016 IPR029039 Flavoprotein-like domain SMA_RS03420 935c40f8d5c9bec1a181c88eed6f0630 185 Gene3D G3DSA:3.40.50.360 2 179 5.0E-39 T 25-04-2016 IPR029039 Flavoprotein-like domain SMA_RS03420 935c40f8d5c9bec1a181c88eed6f0630 185 PANTHER PTHR10204:SF42 3 168 1.9E-35 T 25-04-2016 SMA_RS03420 935c40f8d5c9bec1a181c88eed6f0630 185 Pfam PF02525 Flavodoxin-like fold 3 173 1.7E-32 T 25-04-2016 IPR003680 Flavodoxin-like fold SMA_RS04165 b8c6fa42a66a882b4412238afffcf7b9 551 Gene3D G3DSA:3.50.50.60 2 113 2.3E-21 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMA_RS04165 b8c6fa42a66a882b4412238afffcf7b9 551 SUPERFAMILY SSF51905 106 316 5.43E-42 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMA_RS04165 b8c6fa42a66a882b4412238afffcf7b9 551 SUPERFAMILY SSF51905 3 124 4.19E-19 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMA_RS04165 b8c6fa42a66a882b4412238afffcf7b9 551 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 261 283 1.1E-20 T 25-04-2016 SMA_RS04165 b8c6fa42a66a882b4412238afffcf7b9 551 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 234 250 1.1E-20 T 25-04-2016 SMA_RS04165 b8c6fa42a66a882b4412238afffcf7b9 551 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 152 170 1.1E-20 T 25-04-2016 SMA_RS04165 b8c6fa42a66a882b4412238afffcf7b9 551 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 104 122 1.1E-20 T 25-04-2016 SMA_RS04165 b8c6fa42a66a882b4412238afffcf7b9 551 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 1.1E-20 T 25-04-2016 SMA_RS04165 b8c6fa42a66a882b4412238afffcf7b9 551 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 3 25 5.6E-14 T 25-04-2016 SMA_RS04165 b8c6fa42a66a882b4412238afffcf7b9 551 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 276 283 5.6E-14 T 25-04-2016 SMA_RS04165 b8c6fa42a66a882b4412238afffcf7b9 551 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 235 249 5.6E-14 T 25-04-2016 SMA_RS04165 b8c6fa42a66a882b4412238afffcf7b9 551 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 152 177 5.6E-14 T 25-04-2016 SMA_RS04165 b8c6fa42a66a882b4412238afffcf7b9 551 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 306 2.9E-57 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMA_RS04165 b8c6fa42a66a882b4412238afffcf7b9 551 SMART SM00450 451 546 2.5E-12 T 25-04-2016 IPR001763 Rhodanese-like domain SMA_RS04165 b8c6fa42a66a882b4412238afffcf7b9 551 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 329 429 1.4E-14 T 25-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 SMA_RS04165 b8c6fa42a66a882b4412238afffcf7b9 551 SUPERFAMILY SSF55424 322 445 1.51E-31 T 25-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 SMA_RS04165 b8c6fa42a66a882b4412238afffcf7b9 551 PANTHER PTHR22912:SF140 2 440 4.2E-169 T 25-04-2016 SMA_RS04165 b8c6fa42a66a882b4412238afffcf7b9 551 SUPERFAMILY SSF52821 433 540 4.45E-21 T 25-04-2016 IPR001763 Rhodanese-like domain SMA_RS04165 b8c6fa42a66a882b4412238afffcf7b9 551 Gene3D G3DSA:3.50.50.60 114 315 2.0E-55 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMA_RS04165 b8c6fa42a66a882b4412238afffcf7b9 551 PANTHER PTHR22912 2 440 4.2E-169 T 25-04-2016 SMA_RS04165 b8c6fa42a66a882b4412238afffcf7b9 551 Gene3D G3DSA:3.30.390.30 335 445 1.6E-41 T 25-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 SMA_RS04165 b8c6fa42a66a882b4412238afffcf7b9 551 Pfam PF00581 Rhodanese-like domain 458 538 1.3E-7 T 25-04-2016 IPR001763 Rhodanese-like domain SMA_RS04165 b8c6fa42a66a882b4412238afffcf7b9 551 Gene3D G3DSA:3.40.250.10 456 537 7.3E-18 T 25-04-2016 IPR001763 Rhodanese-like domain SMA_RS03190 a228e74ee53313ec96cb37a01c3ecca5 91 Pfam PF00216 Bacterial DNA-binding protein 3 91 4.0E-35 T 25-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 SMA_RS03190 a228e74ee53313ec96cb37a01c3ecca5 91 Gene3D G3DSA:4.10.520.10 3 91 1.1E-38 T 25-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 SMA_RS03190 a228e74ee53313ec96cb37a01c3ecca5 91 SUPERFAMILY SSF47729 3 91 5.3E-33 T 25-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 SMA_RS03190 a228e74ee53313ec96cb37a01c3ecca5 91 SMART SM00411 2 91 5.0E-47 T 25-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 SMA_RS03190 a228e74ee53313ec96cb37a01c3ecca5 91 PRINTS PR01727 Prokaryotic integration host factor signature 41 56 5.3E-22 T 25-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 SMA_RS03190 a228e74ee53313ec96cb37a01c3ecca5 91 PRINTS PR01727 Prokaryotic integration host factor signature 59 72 5.3E-22 T 25-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 SMA_RS03190 a228e74ee53313ec96cb37a01c3ecca5 91 PRINTS PR01727 Prokaryotic integration host factor signature 75 89 5.3E-22 T 25-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 SMA_RS03190 a228e74ee53313ec96cb37a01c3ecca5 91 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 47 66 - T 25-04-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 SMA_RS03190 a228e74ee53313ec96cb37a01c3ecca5 91 PANTHER PTHR33175 1 91 2.3E-45 T 25-04-2016 SMA_RS07090 c3a8fe7a88fc899db72806ba6d4ee122 242 SUPERFAMILY SSF54637 152 239 1.31E-22 T 25-04-2016 IPR029069 HotDog domain SMA_RS07090 c3a8fe7a88fc899db72806ba6d4ee122 242 SUPERFAMILY SSF54637 1 146 1.7E-36 T 25-04-2016 IPR029069 HotDog domain SMA_RS07090 c3a8fe7a88fc899db72806ba6d4ee122 242 Gene3D G3DSA:3.10.129.10 152 240 2.5E-24 T 25-04-2016 IPR029069 HotDog domain SMA_RS07090 c3a8fe7a88fc899db72806ba6d4ee122 242 PANTHER PTHR31727 2 215 1.5E-37 T 25-04-2016 SMA_RS07090 c3a8fe7a88fc899db72806ba6d4ee122 242 Gene3D G3DSA:3.10.129.10 2 144 1.3E-33 T 25-04-2016 IPR029069 HotDog domain SMA_RS07090 c3a8fe7a88fc899db72806ba6d4ee122 242 Pfam PF01643 Acyl-ACP thioesterase 2 241 7.8E-88 T 25-04-2016 IPR002864 Acyl-ACP thioesterase GO:0006633|GO:0016790 SMA_RS07090 c3a8fe7a88fc899db72806ba6d4ee122 242 PANTHER PTHR31727:SF6 2 215 1.5E-37 T 25-04-2016 SMA_RS06540 295152fcbfc948d46e2072fe2c70994d 271 PANTHER PTHR30614:SF15 27 268 3.1E-44 T 25-04-2016 SMA_RS06540 295152fcbfc948d46e2072fe2c70994d 271 SUPERFAMILY SSF53850 1 258 4.95E-57 T 25-04-2016 SMA_RS06540 295152fcbfc948d46e2072fe2c70994d 271 PANTHER PTHR30614 27 268 3.1E-44 T 25-04-2016 SMA_RS06540 295152fcbfc948d46e2072fe2c70994d 271 SMART SM00062 36 259 3.9E-43 T 25-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SMA_RS06540 295152fcbfc948d46e2072fe2c70994d 271 Gene3D G3DSA:3.40.190.10 117 217 1.6E-19 T 25-04-2016 SMA_RS06540 295152fcbfc948d46e2072fe2c70994d 271 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 37 258 5.7E-47 T 25-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SMA_RS06540 295152fcbfc948d46e2072fe2c70994d 271 Gene3D G3DSA:3.40.190.10 33 116 8.5E-31 T 25-04-2016 SMA_RS06540 295152fcbfc948d46e2072fe2c70994d 271 Gene3D G3DSA:3.40.190.10 221 258 8.5E-31 T 25-04-2016 SMA_RS07015 95f153a59520986254615f18e61451d6 453 Gene3D G3DSA:3.40.50.150 244 450 1.4E-65 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMA_RS07015 95f153a59520986254615f18e61451d6 453 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 15 443 5.2E-133 T 25-04-2016 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 SMA_RS07015 95f153a59520986254615f18e61451d6 453 SUPERFAMILY SSF53335 77 450 3.7E-73 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMA_RS07015 95f153a59520986254615f18e61451d6 453 PANTHER PTHR11061 2 453 5.6E-154 T 25-04-2016 SMA_RS07015 95f153a59520986254615f18e61451d6 453 Pfam PF01938 TRAM domain 7 57 5.0E-9 T 25-04-2016 IPR002792 TRAM domain SMA_RS07015 95f153a59520986254615f18e61451d6 453 PANTHER PTHR11061:SF30 2 453 5.6E-154 T 25-04-2016 SMA_RS07015 95f153a59520986254615f18e61451d6 453 Gene3D G3DSA:2.40.50.140 2 69 3.7E-22 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMA_RS07015 95f153a59520986254615f18e61451d6 453 SUPERFAMILY SSF50249 3 58 4.45E-15 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMA_RS07015 95f153a59520986254615f18e61451d6 453 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 381 412 - T 25-04-2016 IPR030390 RNA methyltransferase TrmA, active site SMA_RS07015 95f153a59520986254615f18e61451d6 453 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 273 450 3.9E-24 T 25-04-2016 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 SMA_RS07155 dd5958f2d17bdf34d2d473e141b9a93c 164 SUPERFAMILY SSF55811 9 161 2.3E-21 T 25-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SMA_RS07155 dd5958f2d17bdf34d2d473e141b9a93c 164 Gene3D G3DSA:3.90.79.10 4 161 1.7E-25 T 25-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SMA_RS07155 dd5958f2d17bdf34d2d473e141b9a93c 164 Pfam PF00293 NUDIX domain 29 143 2.1E-10 T 25-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 SMA_RS09985 37265e20ddd17c55aaee786df72dc8f3 878 PANTHER PTHR10133:SF27 2 878 0.0 T 25-04-2016 SMA_RS09985 37265e20ddd17c55aaee786df72dc8f3 878 TIGRFAM TIGR00593 pola: DNA polymerase I 7 878 0.0 T 25-04-2016 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SMA_RS09985 37265e20ddd17c55aaee786df72dc8f3 878 Gene3D G3DSA:3.30.420.10 303 490 2.3E-45 T 25-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMA_RS09985 37265e20ddd17c55aaee786df72dc8f3 878 SMART SM00482 634 842 1.3E-112 T 25-04-2016 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SMA_RS09985 37265e20ddd17c55aaee786df72dc8f3 878 Gene3D G3DSA:3.30.70.370 768 878 1.4E-62 T 25-04-2016 SMA_RS09985 37265e20ddd17c55aaee786df72dc8f3 878 Gene3D G3DSA:3.30.70.370 611 660 1.4E-62 T 25-04-2016 SMA_RS09985 37265e20ddd17c55aaee786df72dc8f3 878 SMART SM00474 299 466 2.5E-11 T 25-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 SMA_RS09985 37265e20ddd17c55aaee786df72dc8f3 878 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 178 272 6.6E-32 T 25-04-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 SMA_RS09985 37265e20ddd17c55aaee786df72dc8f3 878 Gene3D G3DSA:3.40.50.1010 5 192 6.0E-69 T 25-04-2016 IPR029060 PIN domain-like SMA_RS09985 37265e20ddd17c55aaee786df72dc8f3 878 SUPERFAMILY SSF88723 3 177 1.23E-51 T 25-04-2016 IPR029060 PIN domain-like SMA_RS09985 37265e20ddd17c55aaee786df72dc8f3 878 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 6 177 6.0E-52 T 25-04-2016 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 SMA_RS09985 37265e20ddd17c55aaee786df72dc8f3 878 PRINTS PR00868 DNA-polymerase family A (pol I) signature 763 774 2.8E-80 T 25-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SMA_RS09985 37265e20ddd17c55aaee786df72dc8f3 878 PRINTS PR00868 DNA-polymerase family A (pol I) signature 626 641 2.8E-80 T 25-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SMA_RS09985 37265e20ddd17c55aaee786df72dc8f3 878 PRINTS PR00868 DNA-polymerase family A (pol I) signature 679 692 2.8E-80 T 25-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SMA_RS09985 37265e20ddd17c55aaee786df72dc8f3 878 PRINTS PR00868 DNA-polymerase family A (pol I) signature 649 672 2.8E-80 T 25-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SMA_RS09985 37265e20ddd17c55aaee786df72dc8f3 878 PRINTS PR00868 DNA-polymerase family A (pol I) signature 603 625 2.8E-80 T 25-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SMA_RS09985 37265e20ddd17c55aaee786df72dc8f3 878 PRINTS PR00868 DNA-polymerase family A (pol I) signature 795 811 2.8E-80 T 25-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SMA_RS09985 37265e20ddd17c55aaee786df72dc8f3 878 PRINTS PR00868 DNA-polymerase family A (pol I) signature 825 838 2.8E-80 T 25-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SMA_RS09985 37265e20ddd17c55aaee786df72dc8f3 878 PRINTS PR00868 DNA-polymerase family A (pol I) signature 741 752 2.8E-80 T 25-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SMA_RS09985 37265e20ddd17c55aaee786df72dc8f3 878 PRINTS PR00868 DNA-polymerase family A (pol I) signature 704 729 2.8E-80 T 25-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SMA_RS09985 37265e20ddd17c55aaee786df72dc8f3 878 ProSitePatterns PS00447 DNA polymerase family A signature. 704 723 - T 25-04-2016 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SMA_RS09985 37265e20ddd17c55aaee786df72dc8f3 878 Gene3D G3DSA:1.10.150.20 661 767 1.0E-37 T 25-04-2016 SMA_RS09985 37265e20ddd17c55aaee786df72dc8f3 878 Pfam PF00476 DNA polymerase family A 499 876 1.3E-150 T 25-04-2016 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SMA_RS09985 37265e20ddd17c55aaee786df72dc8f3 878 SMART SM00279 180 215 3.7E-16 T 25-04-2016 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 SMA_RS09985 37265e20ddd17c55aaee786df72dc8f3 878 SUPERFAMILY SSF47807 178 292 8.67E-34 T 25-04-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 SMA_RS09985 37265e20ddd17c55aaee786df72dc8f3 878 Gene3D G3DSA:1.20.1060.10 492 610 2.2E-36 T 25-04-2016 SMA_RS09985 37265e20ddd17c55aaee786df72dc8f3 878 SUPERFAMILY SSF56672 471 878 1.56E-147 T 25-04-2016 SMA_RS09985 37265e20ddd17c55aaee786df72dc8f3 878 SUPERFAMILY SSF53098 304 467 3.6E-30 T 25-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMA_RS09985 37265e20ddd17c55aaee786df72dc8f3 878 SMART SM00475 5 269 3.6E-146 T 25-04-2016 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 SMA_RS09985 37265e20ddd17c55aaee786df72dc8f3 878 Gene3D G3DSA:1.10.150.20 193 254 9.8E-30 T 25-04-2016 SMA_RS09985 37265e20ddd17c55aaee786df72dc8f3 878 PANTHER PTHR10133 2 878 0.0 T 25-04-2016 SMA_RS01425 1c018b5c8d41c2d0dac5b722389fe765 205 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 117 149 8.1E-4 T 25-04-2016 IPR001451 Hexapeptide repeat SMA_RS01425 1c018b5c8d41c2d0dac5b722389fe765 205 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 6 165 4.5E-69 T 25-04-2016 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|UniPathway: UPA00136 SMA_RS01425 1c018b5c8d41c2d0dac5b722389fe765 205 PANTHER PTHR23416 5 186 2.4E-81 T 25-04-2016 SMA_RS01425 1c018b5c8d41c2d0dac5b722389fe765 205 PANTHER PTHR23416:SF55 5 186 2.4E-81 T 25-04-2016 SMA_RS01425 1c018b5c8d41c2d0dac5b722389fe765 205 Gene3D G3DSA:2.160.10.10 62 194 7.8E-31 T 25-04-2016 SMA_RS01425 1c018b5c8d41c2d0dac5b722389fe765 205 Gene3D G3DSA:1.10.3130.10 5 61 3.6E-23 T 25-04-2016 SMA_RS01425 1c018b5c8d41c2d0dac5b722389fe765 205 PIRSF PIRSF000441 2 200 5.9E-69 T 25-04-2016 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|UniPathway: UPA00136 SMA_RS01425 1c018b5c8d41c2d0dac5b722389fe765 205 SUPERFAMILY SSF51161 4 175 1.18E-50 T 25-04-2016 IPR011004 Trimeric LpxA-like SMA_RS03045 de7fc712b8a1dcd0e19fd168e5740a6d 202 PANTHER PTHR35798:SF1 20 202 6.4E-22 T 25-04-2016 SMA_RS03045 de7fc712b8a1dcd0e19fd168e5740a6d 202 Pfam PF04472 Protein of unknown function (DUF552) 112 178 1.4E-17 T 25-04-2016 IPR007561 Cell division protein SepF/SepF-related GO:0000917 SMA_RS03045 de7fc712b8a1dcd0e19fd168e5740a6d 202 Hamap MF_01197 Cell division protein SepF [sepF]. 4 187 19.277 T 25-04-2016 IPR023052 Cell division protein SepF GO:0090529 SMA_RS03045 de7fc712b8a1dcd0e19fd168e5740a6d 202 PANTHER PTHR35798 20 202 6.4E-22 T 25-04-2016 SMA_RS05755 8743165535dfa04f0f05c7f96d938f19 393 Pfam PF00589 Phage integrase family 199 363 6.3E-20 T 25-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 SMA_RS05755 8743165535dfa04f0f05c7f96d938f19 393 PANTHER PTHR30349 8 367 2.5E-41 T 25-04-2016 SMA_RS05755 8743165535dfa04f0f05c7f96d938f19 393 SUPERFAMILY SSF56349 74 366 3.24E-55 T 25-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 SMA_RS05755 8743165535dfa04f0f05c7f96d938f19 393 PANTHER PTHR30349:SF35 8 367 2.5E-41 T 25-04-2016 SMA_RS05755 8743165535dfa04f0f05c7f96d938f19 393 Pfam PF14659 Phage integrase, N-terminal SAM-like domain 75 131 4.2E-5 T 25-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 SMA_RS05755 8743165535dfa04f0f05c7f96d938f19 393 Gene3D G3DSA:1.10.150.130 74 172 2.8E-8 T 25-04-2016 IPR023109 Integrase/recombinase, N-terminal SMA_RS05755 8743165535dfa04f0f05c7f96d938f19 393 Gene3D G3DSA:1.10.443.10 179 367 2.6E-30 T 25-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 SMA_RS05805 d0f90dc8d0ecdf289e68f0fa960ebc77 458 Pfam PF00324 Amino acid permease 20 458 4.3E-109 T 25-04-2016 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 SMA_RS05805 d0f90dc8d0ecdf289e68f0fa960ebc77 458 PIRSF PIRSF006060 1 458 2.1E-77 T 25-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 SMA_RS05805 d0f90dc8d0ecdf289e68f0fa960ebc77 458 PANTHER PTHR11785:SF399 1 454 4.9E-221 T 25-04-2016 SMA_RS05805 d0f90dc8d0ecdf289e68f0fa960ebc77 458 ProSitePatterns PS00218 Amino acid permeases signature. 45 76 - T 25-04-2016 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 SMA_RS05805 d0f90dc8d0ecdf289e68f0fa960ebc77 458 PANTHER PTHR11785 1 454 4.9E-221 T 25-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 SMA_RS02635 b3656025a69ee7d9bbcd0eb8e44e3fb9 452 SUPERFAMILY SSF50249 3 59 1.6E-12 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMA_RS02635 b3656025a69ee7d9bbcd0eb8e44e3fb9 452 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 17 442 2.8E-134 T 25-04-2016 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 SMA_RS02635 b3656025a69ee7d9bbcd0eb8e44e3fb9 452 Gene3D G3DSA:2.40.50.140 1 79 8.9E-27 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMA_RS02635 b3656025a69ee7d9bbcd0eb8e44e3fb9 452 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 432 442 - T 25-04-2016 IPR030391 RNA methyltransferase TrmA, conserved site SMA_RS02635 b3656025a69ee7d9bbcd0eb8e44e3fb9 452 PANTHER PTHR11061 3 451 9.5E-254 T 25-04-2016 SMA_RS02635 b3656025a69ee7d9bbcd0eb8e44e3fb9 452 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 381 412 - T 25-04-2016 IPR030390 RNA methyltransferase TrmA, active site SMA_RS02635 b3656025a69ee7d9bbcd0eb8e44e3fb9 452 Pfam PF01938 TRAM domain 5 58 1.5E-6 T 25-04-2016 IPR002792 TRAM domain SMA_RS02635 b3656025a69ee7d9bbcd0eb8e44e3fb9 452 SUPERFAMILY SSF53335 68 449 1.38E-73 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMA_RS02635 b3656025a69ee7d9bbcd0eb8e44e3fb9 452 Gene3D G3DSA:3.40.50.150 245 448 1.2E-60 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMA_RS02635 b3656025a69ee7d9bbcd0eb8e44e3fb9 452 PANTHER PTHR11061:SF35 3 451 9.5E-254 T 25-04-2016 SMA_RS02635 b3656025a69ee7d9bbcd0eb8e44e3fb9 452 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 89 450 8.8E-21 T 25-04-2016 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 SMA_RS06115 d3df26907a26e4c2c376498774171065 656 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 173 262 1.0E-15 T 25-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 SMA_RS06115 d3df26907a26e4c2c376498774171065 656 SUPERFAMILY SSF52794 171 271 3.14E-34 T 25-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 SMA_RS06115 d3df26907a26e4c2c376498774171065 656 Gene3D G3DSA:3.40.930.10 1 152 7.3E-51 T 25-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SMA_RS06115 d3df26907a26e4c2c376498774171065 656 PANTHER PTHR30505:SF0 43 385 4.3E-266 T 25-04-2016 SMA_RS06115 d3df26907a26e4c2c376498774171065 656 PANTHER PTHR30505:SF0 407 653 4.3E-266 T 25-04-2016 SMA_RS06115 d3df26907a26e4c2c376498774171065 656 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 52 68 - T 25-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SMA_RS06115 d3df26907a26e4c2c376498774171065 656 Pfam PF02378 Phosphotransferase system, EIIC 301 600 1.6E-23 T 25-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 SMA_RS06115 d3df26907a26e4c2c376498774171065 656 PANTHER PTHR30505 43 385 4.3E-266 T 25-04-2016 SMA_RS06115 d3df26907a26e4c2c376498774171065 656 PANTHER PTHR30505 407 653 4.3E-266 T 25-04-2016 SMA_RS06115 d3df26907a26e4c2c376498774171065 656 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 6 147 6.5E-35 T 25-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SMA_RS06115 d3df26907a26e4c2c376498774171065 656 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 293 652 3.3E-117 T 25-04-2016 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 SMA_RS06115 d3df26907a26e4c2c376498774171065 656 SUPERFAMILY SSF55804 1 147 3.92E-42 T 25-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 SMA_RS06115 d3df26907a26e4c2c376498774171065 656 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 172 255 3.8E-27 T 25-04-2016 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 SMA_RS06115 d3df26907a26e4c2c376498774171065 656 TIGRFAM TIGR00848 fruA: PTS system, fructose subfamily, IIA component 6 133 1.9E-42 T 25-04-2016 IPR004715 Phosphotransferase system, IIA component fructose subfamily GO:0008982|GO:0009401|GO:0016021 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SMA_RS06115 d3df26907a26e4c2c376498774171065 656 Gene3D G3DSA:3.40.50.2300 167 272 2.6E-41 T 25-04-2016 SMA_RS00985 a161695a72d98d86c4cf3430c0337e0e 439 Gene3D G3DSA:3.30.390.30 325 437 1.9E-32 T 25-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 SMA_RS00985 a161695a72d98d86c4cf3430c0337e0e 439 PANTHER PTHR22912:SF145 1 439 2.1E-197 T 25-04-2016 SMA_RS00985 a161695a72d98d86c4cf3430c0337e0e 439 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 328 434 5.4E-26 T 25-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 SMA_RS00985 a161695a72d98d86c4cf3430c0337e0e 439 PIRSF PIRSF000350 1 437 3.1E-77 T 25-04-2016 SMA_RS00985 a161695a72d98d86c4cf3430c0337e0e 439 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 119 137 1.8E-32 T 25-04-2016 SMA_RS00985 a161695a72d98d86c4cf3430c0337e0e 439 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 159 177 1.8E-32 T 25-04-2016 SMA_RS00985 a161695a72d98d86c4cf3430c0337e0e 439 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 243 259 1.8E-32 T 25-04-2016 SMA_RS00985 a161695a72d98d86c4cf3430c0337e0e 439 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 272 294 1.8E-32 T 25-04-2016 SMA_RS00985 a161695a72d98d86c4cf3430c0337e0e 439 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 1.8E-32 T 25-04-2016 SMA_RS00985 a161695a72d98d86c4cf3430c0337e0e 439 Gene3D G3DSA:3.50.50.60 122 315 1.1E-53 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMA_RS00985 a161695a72d98d86c4cf3430c0337e0e 439 Gene3D G3DSA:3.50.50.60 2 121 8.9E-27 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMA_RS00985 a161695a72d98d86c4cf3430c0337e0e 439 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 4 300 1.3E-58 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMA_RS00985 a161695a72d98d86c4cf3430c0337e0e 439 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 40 50 - T 25-04-2016 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 SMA_RS00985 a161695a72d98d86c4cf3430c0337e0e 439 SUPERFAMILY SSF55424 326 436 1.37E-30 T 25-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 SMA_RS00985 a161695a72d98d86c4cf3430c0337e0e 439 SUPERFAMILY SSF51905 1 300 1.58E-47 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMA_RS00985 a161695a72d98d86c4cf3430c0337e0e 439 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 122 131 6.9E-52 T 25-04-2016 SMA_RS00985 a161695a72d98d86c4cf3430c0337e0e 439 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 287 294 6.9E-52 T 25-04-2016 SMA_RS00985 a161695a72d98d86c4cf3430c0337e0e 439 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 159 184 6.9E-52 T 25-04-2016 SMA_RS00985 a161695a72d98d86c4cf3430c0337e0e 439 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 39 54 6.9E-52 T 25-04-2016 SMA_RS00985 a161695a72d98d86c4cf3430c0337e0e 439 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 324 345 6.9E-52 T 25-04-2016 SMA_RS00985 a161695a72d98d86c4cf3430c0337e0e 439 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 389 404 6.9E-52 T 25-04-2016 SMA_RS00985 a161695a72d98d86c4cf3430c0337e0e 439 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 411 431 6.9E-52 T 25-04-2016 SMA_RS00985 a161695a72d98d86c4cf3430c0337e0e 439 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 6.9E-52 T 25-04-2016 SMA_RS00985 a161695a72d98d86c4cf3430c0337e0e 439 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 244 258 6.9E-52 T 25-04-2016 SMA_RS00985 a161695a72d98d86c4cf3430c0337e0e 439 PANTHER PTHR22912 1 439 2.1E-197 T 25-04-2016 SMA_RS08770 4b2f9c9b47b412f53fe01072e1829444 842 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 26 497 3.1E-231 T 25-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 SMA_RS08770 4b2f9c9b47b412f53fe01072e1829444 842 PRINTS PR00906 SecA protein signature 394 407 1.1E-70 T 25-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 SMA_RS08770 4b2f9c9b47b412f53fe01072e1829444 842 PRINTS PR00906 SecA protein signature 168 188 1.1E-70 T 25-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 SMA_RS08770 4b2f9c9b47b412f53fe01072e1829444 842 PRINTS PR00906 SecA protein signature 357 374 1.1E-70 T 25-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 SMA_RS08770 4b2f9c9b47b412f53fe01072e1829444 842 PRINTS PR00906 SecA protein signature 99 113 1.1E-70 T 25-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 SMA_RS08770 4b2f9c9b47b412f53fe01072e1829444 842 PRINTS PR00906 SecA protein signature 115 125 1.1E-70 T 25-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 SMA_RS08770 4b2f9c9b47b412f53fe01072e1829444 842 PRINTS PR00906 SecA protein signature 320 342 1.1E-70 T 25-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 SMA_RS08770 4b2f9c9b47b412f53fe01072e1829444 842 PRINTS PR00906 SecA protein signature 61 85 1.1E-70 T 25-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 SMA_RS08770 4b2f9c9b47b412f53fe01072e1829444 842 ProSitePatterns PS01312 SecA family signature. 481 496 - T 25-04-2016 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 SMA_RS08770 4b2f9c9b47b412f53fe01072e1829444 842 SMART SM00958 227 339 1.6E-58 T 25-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 SMA_RS08770 4b2f9c9b47b412f53fe01072e1829444 842 Pfam PF07516 SecA Wing and Scaffold domain 571 779 1.7E-57 T 25-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 SMA_RS08770 4b2f9c9b47b412f53fe01072e1829444 842 SUPERFAMILY SSF52540 349 396 6.62E-78 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS08770 4b2f9c9b47b412f53fe01072e1829444 842 SUPERFAMILY SSF52540 12 226 6.62E-78 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS08770 4b2f9c9b47b412f53fe01072e1829444 842 SMART SM00957 5 383 7.2E-265 T 25-04-2016 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 SMA_RS08770 4b2f9c9b47b412f53fe01072e1829444 842 Hamap MF_01382 Protein translocase subunit SecA [secA]. 3 782 19.277 T 25-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 SMA_RS08770 4b2f9c9b47b412f53fe01072e1829444 842 SUPERFAMILY SSF52540 398 569 3.87E-54 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS08770 4b2f9c9b47b412f53fe01072e1829444 842 SUPERFAMILY SSF81767 230 349 3.66E-41 T 25-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 SMA_RS08770 4b2f9c9b47b412f53fe01072e1829444 842 PANTHER PTHR30612 1 842 0.0 T 25-04-2016 SMA_RS08770 4b2f9c9b47b412f53fe01072e1829444 842 Gene3D G3DSA:1.10.3060.10 601 781 1.4E-49 T 25-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 SMA_RS08770 4b2f9c9b47b412f53fe01072e1829444 842 Pfam PF01043 SecA preprotein cross-linking domain 231 339 6.1E-35 T 25-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 SMA_RS08770 4b2f9c9b47b412f53fe01072e1829444 842 Gene3D G3DSA:3.40.50.300 398 570 1.8E-78 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS08770 4b2f9c9b47b412f53fe01072e1829444 842 Pfam PF02810 SEC-C motif 821 839 4.2E-10 T 25-04-2016 IPR004027 SEC-C motif SMA_RS08770 4b2f9c9b47b412f53fe01072e1829444 842 Gene3D G3DSA:3.40.50.300 350 397 8.4E-114 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS08770 4b2f9c9b47b412f53fe01072e1829444 842 Gene3D G3DSA:3.40.50.300 10 226 8.4E-114 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS08770 4b2f9c9b47b412f53fe01072e1829444 842 Gene3D G3DSA:3.90.1440.10 230 349 4.7E-43 T 25-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 SMA_RS08770 4b2f9c9b47b412f53fe01072e1829444 842 Pfam PF07517 SecA DEAD-like domain 10 383 1.5E-123 T 25-04-2016 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 SMA_RS08770 4b2f9c9b47b412f53fe01072e1829444 842 SUPERFAMILY SSF81886 573 790 4.97E-73 T 25-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 SMA_RS08770 4b2f9c9b47b412f53fe01072e1829444 842 SUPERFAMILY SSF81886 817 829 4.97E-73 T 25-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 SMA_RS02650 9f7e78d43dc31824ac44d65210e8b855 616 ProSitePatterns PS01229 Hypothetical cof family signature 2. 507 529 - T 25-04-2016 SMA_RS02650 9f7e78d43dc31824ac44d65210e8b855 616 Pfam PF00702 haloacid dehalogenase-like hydrolase 305 521 2.1E-33 T 25-04-2016 SMA_RS02650 9f7e78d43dc31824ac44d65210e8b855 616 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 89 593 4.3E-76 T 25-04-2016 IPR001757 P-type ATPase GO:0016021 SMA_RS02650 9f7e78d43dc31824ac44d65210e8b855 616 SUPERFAMILY SSF81665 556 590 4.84E-10 T 25-04-2016 SMA_RS02650 9f7e78d43dc31824ac44d65210e8b855 616 SUPERFAMILY SSF81665 218 303 4.84E-10 T 25-04-2016 SMA_RS02650 9f7e78d43dc31824ac44d65210e8b855 616 SUPERFAMILY SSF81665 71 120 4.84E-10 T 25-04-2016 SMA_RS02650 9f7e78d43dc31824ac44d65210e8b855 616 Gene3D G3DSA:2.70.150.10 70 218 1.9E-26 T 25-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 SMA_RS02650 9f7e78d43dc31824ac44d65210e8b855 616 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 66 610 1.5E-166 T 25-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 SMA_RS02650 9f7e78d43dc31824ac44d65210e8b855 616 SUPERFAMILY SSF81653 125 217 4.05E-23 T 25-04-2016 SMA_RS02650 9f7e78d43dc31824ac44d65210e8b855 616 PANTHER PTHR24093 45 611 9.4E-159 T 25-04-2016 SMA_RS02650 9f7e78d43dc31824ac44d65210e8b855 616 Gene3D G3DSA:3.40.50.1000 282 325 1.4E-44 T 25-04-2016 IPR023214 HAD-like domain SMA_RS02650 9f7e78d43dc31824ac44d65210e8b855 616 Gene3D G3DSA:3.40.50.1000 434 570 1.4E-44 T 25-04-2016 IPR023214 HAD-like domain SMA_RS02650 9f7e78d43dc31824ac44d65210e8b855 616 Pfam PF00122 E1-E2 ATPase 87 299 6.6E-56 T 25-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 SMA_RS02650 9f7e78d43dc31824ac44d65210e8b855 616 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 48 610 3.1E-124 T 25-04-2016 SMA_RS02650 9f7e78d43dc31824ac44d65210e8b855 616 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 311 317 - T 25-04-2016 IPR018303 P-type ATPase, phosphorylation site SMA_RS02650 9f7e78d43dc31824ac44d65210e8b855 616 PRINTS PR00941 Cadmium-transporting ATPase signature 101 121 3.6E-9 T 25-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 SMA_RS02650 9f7e78d43dc31824ac44d65210e8b855 616 PRINTS PR00941 Cadmium-transporting ATPase signature 183 199 3.6E-9 T 25-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 SMA_RS02650 9f7e78d43dc31824ac44d65210e8b855 616 PRINTS PR00941 Cadmium-transporting ATPase signature 202 216 3.6E-9 T 25-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 SMA_RS02650 9f7e78d43dc31824ac44d65210e8b855 616 PRINTS PR00941 Cadmium-transporting ATPase signature 47 59 3.6E-9 T 25-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 SMA_RS02650 9f7e78d43dc31824ac44d65210e8b855 616 SUPERFAMILY SSF56784 363 608 7.73E-48 T 25-04-2016 IPR023214 HAD-like domain SMA_RS02650 9f7e78d43dc31824ac44d65210e8b855 616 SUPERFAMILY SSF56784 309 327 7.73E-48 T 25-04-2016 IPR023214 HAD-like domain SMA_RS02650 9f7e78d43dc31824ac44d65210e8b855 616 Gene3D G3DSA:3.40.1110.10 338 433 8.9E-11 T 25-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 SMA_RS02650 9f7e78d43dc31824ac44d65210e8b855 616 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 507 526 7.7E-20 T 25-04-2016 SMA_RS02650 9f7e78d43dc31824ac44d65210e8b855 616 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 309 323 7.7E-20 T 25-04-2016 SMA_RS02650 9f7e78d43dc31824ac44d65210e8b855 616 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 167 181 7.7E-20 T 25-04-2016 SMA_RS02650 9f7e78d43dc31824ac44d65210e8b855 616 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 530 542 7.7E-20 T 25-04-2016 SMA_RS06775 13df54b0648b890d96644f86374b5328 232 Gene3D G3DSA:3.40.50.2300 10 132 4.9E-29 T 25-04-2016 SMA_RS06775 13df54b0648b890d96644f86374b5328 232 PANTHER PTHR26402 10 231 3.5E-75 T 25-04-2016 SMA_RS06775 13df54b0648b890d96644f86374b5328 232 SMART SM00448 10 121 2.8E-30 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMA_RS06775 13df54b0648b890d96644f86374b5328 232 Pfam PF00486 Transcriptional regulatory protein, C terminal 154 230 8.2E-20 T 25-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SMA_RS06775 13df54b0648b890d96644f86374b5328 232 SUPERFAMILY SSF52172 10 182 3.53E-31 T 25-04-2016 IPR011006 CheY-like superfamily SMA_RS06775 13df54b0648b890d96644f86374b5328 232 Pfam PF00072 Response regulator receiver domain 12 121 2.7E-22 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMA_RS06775 13df54b0648b890d96644f86374b5328 232 Gene3D G3DSA:1.10.10.10 133 231 1.2E-26 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMA_RS06775 13df54b0648b890d96644f86374b5328 232 PANTHER PTHR26402:SF611 10 231 3.5E-75 T 25-04-2016 SMA_RS06775 13df54b0648b890d96644f86374b5328 232 SMART SM00862 154 230 1.4E-17 T 25-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SMA_RS09080 b681bcff23d4cbc98643f30249f3edc2 234 SUPERFAMILY SSF46955 5 115 1.83E-25 T 25-04-2016 IPR009061 Putative DNA-binding domain SMA_RS09080 b681bcff23d4cbc98643f30249f3edc2 234 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 6 17 7.3E-9 T 25-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SMA_RS09080 b681bcff23d4cbc98643f30249f3edc2 234 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 17 30 7.3E-9 T 25-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SMA_RS09080 b681bcff23d4cbc98643f30249f3edc2 234 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 41 61 7.3E-9 T 25-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SMA_RS09080 b681bcff23d4cbc98643f30249f3edc2 234 Gene3D G3DSA:1.10.1660.10 5 119 1.4E-28 T 25-04-2016 SMA_RS09080 b681bcff23d4cbc98643f30249f3edc2 234 SMART SM00422 5 74 2.3E-24 T 25-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SMA_RS09080 b681bcff23d4cbc98643f30249f3edc2 234 Pfam PF13411 MerR HTH family regulatory protein 5 73 2.0E-20 T 25-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SMA_RS09080 b681bcff23d4cbc98643f30249f3edc2 234 PANTHER PTHR30204 1 156 3.6E-24 T 25-04-2016 SMA_RS01675 f8d8bce637f58e5be080b18003e21c35 293 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 74 87 - T 25-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 SMA_RS01675 f8d8bce637f58e5be080b18003e21c35 293 SUPERFAMILY SSF51569 1 293 7.14E-98 T 25-04-2016 SMA_RS01675 f8d8bce637f58e5be080b18003e21c35 293 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 133 144 - T 25-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 SMA_RS01675 f8d8bce637f58e5be080b18003e21c35 293 PIRSF PIRSF001359 1 293 1.9E-117 T 25-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 SMA_RS01675 f8d8bce637f58e5be080b18003e21c35 293 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 1 293 3.8E-93 T 25-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 SMA_RS01675 f8d8bce637f58e5be080b18003e21c35 293 Gene3D G3DSA:3.20.20.70 1 293 4.9E-105 T 25-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SMA_RS01675 f8d8bce637f58e5be080b18003e21c35 293 TIGRFAM TIGR01859 fruc_bis_ald_: fructose-1,6-bisphosphate aldolase, class II 3 293 5.2E-123 T 25-04-2016 IPR011289 Fructose-1,6-bisphosphate aldolase, class 2 GO:0004332|GO:0006096|GO:0008270|GO:0030388 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385|UniPathway: UPA00109 SMA_RS01675 f8d8bce637f58e5be080b18003e21c35 293 PANTHER PTHR30304 1 293 1.2E-92 T 25-04-2016 SMA_RS01675 f8d8bce637f58e5be080b18003e21c35 293 Pfam PF01116 Fructose-bisphosphate aldolase class-II 6 292 1.1E-96 T 25-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 SMA_RS10240 596a7acf33cd782e51c4e16b6b80656d 113 SUPERFAMILY SSF117916 13 109 1.37E-24 T 25-04-2016 SMA_RS10240 596a7acf33cd782e51c4e16b6b80656d 113 Pfam PF01883 Domain of unknown function DUF59 20 89 1.2E-9 T 25-04-2016 IPR002744 Domain of unknown function DUF59 SMA_RS00425 3994c6d497639da939fb6b3684702b07 164 Pfam PF00333 Ribosomal protein S5, N-terminal domain 10 74 4.4E-32 T 25-04-2016 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 SMA_RS00425 3994c6d497639da939fb6b3684702b07 164 SUPERFAMILY SSF54211 79 157 5.82E-24 T 25-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SMA_RS00425 3994c6d497639da939fb6b3684702b07 164 Pfam PF03719 Ribosomal protein S5, C-terminal domain 87 156 4.2E-27 T 25-04-2016 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 SMA_RS00425 3994c6d497639da939fb6b3684702b07 164 ProSitePatterns PS00585 Ribosomal protein S5 signature. 27 59 - T 25-04-2016 IPR018192 Ribosomal protein S5, N-terminal, conserved site SMA_RS00425 3994c6d497639da939fb6b3684702b07 164 PANTHER PTHR13718 9 160 1.4E-71 T 25-04-2016 IPR000851 Ribosomal protein S5 GO:0003735|GO:0005840|GO:0006412 SMA_RS00425 3994c6d497639da939fb6b3684702b07 164 Gene3D G3DSA:3.30.230.10 75 157 1.7E-30 T 25-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SMA_RS00425 3994c6d497639da939fb6b3684702b07 164 Gene3D G3DSA:3.30.160.20 9 71 1.1E-32 T 25-04-2016 IPR014720 Double-stranded RNA-binding domain SMA_RS00425 3994c6d497639da939fb6b3684702b07 164 SUPERFAMILY SSF54768 8 75 9.0E-25 T 25-04-2016 SMA_RS00425 3994c6d497639da939fb6b3684702b07 164 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 9 161 7.3E-68 T 25-04-2016 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 SMA_RS00425 3994c6d497639da939fb6b3684702b07 164 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 162 35.558 T 25-04-2016 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 SMA_RS03125 8083c0cb25cf1146a75510a112dc83a9 284 Hamap MF_01576 Bifunctional protein FolD [folD]. 2 282 38.967 T 25-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 SMA_RS03125 8083c0cb25cf1146a75510a112dc83a9 284 PANTHER PTHR10025 1 280 1.3E-157 T 25-04-2016 SMA_RS03125 8083c0cb25cf1146a75510a112dc83a9 284 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 259 267 - T 25-04-2016 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 SMA_RS03125 8083c0cb25cf1146a75510a112dc83a9 284 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 123 280 4.0E-72 T 25-04-2016 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 SMA_RS03125 8083c0cb25cf1146a75510a112dc83a9 284 ProSitePatterns PS00766 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 1. 75 100 - T 25-04-2016 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 SMA_RS03125 8083c0cb25cf1146a75510a112dc83a9 284 SUPERFAMILY SSF51735 122 279 3.81E-53 T 25-04-2016 IPR016040 NAD(P)-binding domain SMA_RS03125 8083c0cb25cf1146a75510a112dc83a9 284 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 4 120 3.0E-39 T 25-04-2016 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 SMA_RS03125 8083c0cb25cf1146a75510a112dc83a9 284 Gene3D G3DSA:3.40.192.10 6 138 1.0E-50 T 25-04-2016 SMA_RS03125 8083c0cb25cf1146a75510a112dc83a9 284 SUPERFAMILY SSF53223 1 121 1.44E-40 T 25-04-2016 SMA_RS03125 8083c0cb25cf1146a75510a112dc83a9 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 238 254 1.9E-85 T 25-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 SMA_RS03125 8083c0cb25cf1146a75510a112dc83a9 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 33 55 1.9E-85 T 25-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 SMA_RS03125 8083c0cb25cf1146a75510a112dc83a9 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 203 232 1.9E-85 T 25-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 SMA_RS03125 8083c0cb25cf1146a75510a112dc83a9 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 255 273 1.9E-85 T 25-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 SMA_RS03125 8083c0cb25cf1146a75510a112dc83a9 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 154 174 1.9E-85 T 25-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 SMA_RS03125 8083c0cb25cf1146a75510a112dc83a9 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 74 101 1.9E-85 T 25-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 SMA_RS03125 8083c0cb25cf1146a75510a112dc83a9 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 109 130 1.9E-85 T 25-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 SMA_RS03125 8083c0cb25cf1146a75510a112dc83a9 284 Gene3D G3DSA:3.40.50.720 139 263 5.4E-55 T 25-04-2016 IPR016040 NAD(P)-binding domain SMA_RS08675 f715f22749d48541914d40afbb44948e 100 PANTHER PTHR15004 1 96 1.3E-30 T 25-04-2016 SMA_RS08675 f715f22749d48541914d40afbb44948e 100 Hamap MF_00122 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C [gatC]. 2 95 24.966 T 25-04-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 SMA_RS08675 f715f22749d48541914d40afbb44948e 100 TIGRFAM TIGR00135 gatC: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit 3 95 1.7E-29 T 25-04-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 SMA_RS08675 f715f22749d48541914d40afbb44948e 100 PANTHER PTHR15004:SF0 1 96 1.3E-30 T 25-04-2016 SMA_RS08675 f715f22749d48541914d40afbb44948e 100 Pfam PF02686 Glu-tRNAGln amidotransferase C subunit 19 90 3.3E-19 T 25-04-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 SMA_RS08675 f715f22749d48541914d40afbb44948e 100 SUPERFAMILY SSF141000 2 93 2.88E-28 T 25-04-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 SMA_RS09290 7d00d20d78684bddb2384bacfaca109c 389 Pfam PF07690 Major Facilitator Superfamily 10 348 2.1E-21 T 25-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SMA_RS09290 7d00d20d78684bddb2384bacfaca109c 389 PANTHER PTHR23530:SF1 1 389 7.1E-28 T 25-04-2016 SMA_RS09290 7d00d20d78684bddb2384bacfaca109c 389 SUPERFAMILY SSF103473 4 384 8.24E-36 T 25-04-2016 IPR020846 Major facilitator superfamily domain SMA_RS09290 7d00d20d78684bddb2384bacfaca109c 389 Gene3D G3DSA:1.20.1250.20 4 187 1.1E-16 T 25-04-2016 SMA_RS09290 7d00d20d78684bddb2384bacfaca109c 389 PANTHER PTHR23530 1 389 7.1E-28 T 25-04-2016 SMA_RS06220 2b63f0cda14440f76038fd83f37dd4ef 308 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 11 304 6.4E-91 T 25-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 SMA_RS06220 2b63f0cda14440f76038fd83f37dd4ef 308 Gene3D G3DSA:3.40.50.1370 11 148 4.4E-43 T 25-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SMA_RS06220 2b63f0cda14440f76038fd83f37dd4ef 308 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 11 152 1.9E-32 T 25-04-2016 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 SMA_RS06220 2b63f0cda14440f76038fd83f37dd4ef 308 SUPERFAMILY SSF53671 9 306 2.99E-88 T 25-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SMA_RS06220 2b63f0cda14440f76038fd83f37dd4ef 308 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 10 306 38.736 T 25-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 SMA_RS06220 2b63f0cda14440f76038fd83f37dd4ef 308 PANTHER PTHR11405:SF16 11 308 2.5E-120 T 25-04-2016 SMA_RS06220 2b63f0cda14440f76038fd83f37dd4ef 308 Gene3D G3DSA:3.40.50.1370 149 283 8.5E-46 T 25-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SMA_RS06220 2b63f0cda14440f76038fd83f37dd4ef 308 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 159 302 9.0E-23 T 25-04-2016 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 SMA_RS06220 2b63f0cda14440f76038fd83f37dd4ef 308 PANTHER PTHR11405 11 308 2.5E-120 T 25-04-2016 SMA_RS06220 2b63f0cda14440f76038fd83f37dd4ef 308 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 257 266 1.1E-19 T 25-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SMA_RS06220 2b63f0cda14440f76038fd83f37dd4ef 308 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 269 292 1.1E-19 T 25-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SMA_RS06220 2b63f0cda14440f76038fd83f37dd4ef 308 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 139 150 1.1E-19 T 25-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SMA_RS06220 2b63f0cda14440f76038fd83f37dd4ef 308 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 53 72 1.1E-19 T 25-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SMA_RS06220 2b63f0cda14440f76038fd83f37dd4ef 308 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 53 60 - T 25-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SMA_RS06220 2b63f0cda14440f76038fd83f37dd4ef 308 PRINTS PR00101 Aspartate carbamoyltransferase signature 220 229 9.2E-31 T 25-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 SMA_RS06220 2b63f0cda14440f76038fd83f37dd4ef 308 PRINTS PR00101 Aspartate carbamoyltransferase signature 138 155 9.2E-31 T 25-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 SMA_RS06220 2b63f0cda14440f76038fd83f37dd4ef 308 PRINTS PR00101 Aspartate carbamoyltransferase signature 43 65 9.2E-31 T 25-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 SMA_RS06220 2b63f0cda14440f76038fd83f37dd4ef 308 PRINTS PR00101 Aspartate carbamoyltransferase signature 285 299 9.2E-31 T 25-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 SMA_RS06220 2b63f0cda14440f76038fd83f37dd4ef 308 PRINTS PR00101 Aspartate carbamoyltransferase signature 81 90 9.2E-31 T 25-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 SMA_RS06220 2b63f0cda14440f76038fd83f37dd4ef 308 PRINTS PR00101 Aspartate carbamoyltransferase signature 261 266 9.2E-31 T 25-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 SMA_RS06575 56448c1c84d249711952b82d251536df 278 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 88 270 7.8E-15 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SMA_RS06575 56448c1c84d249711952b82d251536df 278 PANTHER PTHR32243:SF4 1 278 1.4E-84 T 25-04-2016 SMA_RS06575 56448c1c84d249711952b82d251536df 278 PANTHER PTHR32243 1 278 1.4E-84 T 25-04-2016 SMA_RS06575 56448c1c84d249711952b82d251536df 278 SUPERFAMILY SSF161098 4 278 5.51E-63 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SMA_RS06575 56448c1c84d249711952b82d251536df 278 Gene3D G3DSA:1.10.3720.10 2 266 8.7E-60 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SMA_RS01255 158b7c2c712e2eac67e3f474fbb025ca 475 TIGRFAM TIGR01233 lacG: 6-phospho-beta-galactosidase 9 475 1.6E-284 T 25-04-2016 IPR005928 6-phospho-beta-galactosidase GO:0019512|GO:0033920 KEGG: 00052+3.2.1.85|UniPathway: UPA00542 SMA_RS01255 158b7c2c712e2eac67e3f474fbb025ca 475 PANTHER PTHR10353 293 475 0.0 T 25-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 SMA_RS01255 158b7c2c712e2eac67e3f474fbb025ca 475 PANTHER PTHR10353 1 270 0.0 T 25-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 SMA_RS01255 158b7c2c712e2eac67e3f474fbb025ca 475 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 378 386 - T 25-04-2016 IPR018120 Glycoside hydrolase family 1, active site SMA_RS01255 158b7c2c712e2eac67e3f474fbb025ca 475 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 16 30 - T 25-04-2016 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site SMA_RS01255 158b7c2c712e2eac67e3f474fbb025ca 475 SUPERFAMILY SSF51445 9 472 1.78E-162 T 25-04-2016 IPR017853 Glycoside hydrolase superfamily SMA_RS01255 158b7c2c712e2eac67e3f474fbb025ca 475 Gene3D G3DSA:3.20.20.80 10 473 7.0E-152 T 25-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 SMA_RS01255 158b7c2c712e2eac67e3f474fbb025ca 475 Pfam PF00232 Glycosyl hydrolase family 1 9 472 2.6E-166 T 25-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 SMA_RS01255 158b7c2c712e2eac67e3f474fbb025ca 475 Hamap MF_01574 6-phospho-beta-galactosidase [lacG]. 8 475 65.932 T 25-04-2016 IPR005928 6-phospho-beta-galactosidase GO:0019512|GO:0033920 KEGG: 00052+3.2.1.85|UniPathway: UPA00542 SMA_RS01255 158b7c2c712e2eac67e3f474fbb025ca 475 PANTHER PTHR10353:SF62 293 475 0.0 T 25-04-2016 SMA_RS01255 158b7c2c712e2eac67e3f474fbb025ca 475 PANTHER PTHR10353:SF62 1 270 0.0 T 25-04-2016 SMA_RS01255 158b7c2c712e2eac67e3f474fbb025ca 475 PRINTS PR00131 Glycosyl hydrolase family 1 signature 378 386 1.3E-24 T 25-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 SMA_RS01255 158b7c2c712e2eac67e3f474fbb025ca 475 PRINTS PR00131 Glycosyl hydrolase family 1 signature 398 409 1.3E-24 T 25-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 SMA_RS01255 158b7c2c712e2eac67e3f474fbb025ca 475 PRINTS PR00131 Glycosyl hydrolase family 1 signature 419 436 1.3E-24 T 25-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 SMA_RS01255 158b7c2c712e2eac67e3f474fbb025ca 475 PRINTS PR00131 Glycosyl hydrolase family 1 signature 297 311 1.3E-24 T 25-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 SMA_RS01255 158b7c2c712e2eac67e3f474fbb025ca 475 PRINTS PR00131 Glycosyl hydrolase family 1 signature 443 455 1.3E-24 T 25-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 SMA_RS10355 8cceb7b07cfc2990e93c100fe452e83f 634 Pfam PF01134 Glucose inhibited division protein A 10 402 1.2E-165 T 25-04-2016 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 SMA_RS10355 8cceb7b07cfc2990e93c100fe452e83f 634 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 7 627 41.695 T 25-04-2016 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 SMA_RS10355 8cceb7b07cfc2990e93c100fe452e83f 634 SUPERFAMILY SSF51905 7 68 2.69E-42 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMA_RS10355 8cceb7b07cfc2990e93c100fe452e83f 634 SUPERFAMILY SSF51905 99 262 2.69E-42 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMA_RS10355 8cceb7b07cfc2990e93c100fe452e83f 634 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 10 32 2.6E-6 T 25-04-2016 SMA_RS10355 8cceb7b07cfc2990e93c100fe452e83f 634 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 153 162 2.6E-6 T 25-04-2016 SMA_RS10355 8cceb7b07cfc2990e93c100fe452e83f 634 Gene3D G3DSA:3.50.50.60 9 232 2.1E-34 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMA_RS10355 8cceb7b07cfc2990e93c100fe452e83f 634 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 9 624 1.1E-274 T 25-04-2016 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 SMA_RS10355 8cceb7b07cfc2990e93c100fe452e83f 634 SMART SM01228 549 620 5.8E-41 T 25-04-2016 SMA_RS10355 8cceb7b07cfc2990e93c100fe452e83f 634 PANTHER PTHR11806 4 634 0.0 T 25-04-2016 SMA_RS10355 8cceb7b07cfc2990e93c100fe452e83f 634 PANTHER PTHR11806:SF0 4 634 0.0 T 25-04-2016 SMA_RS10355 8cceb7b07cfc2990e93c100fe452e83f 634 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 11 30 5.9E-5 T 25-04-2016 SMA_RS10355 8cceb7b07cfc2990e93c100fe452e83f 634 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 150 168 5.9E-5 T 25-04-2016 SMA_RS10355 8cceb7b07cfc2990e93c100fe452e83f 634 Pfam PF13932 GidA associated domain 404 619 1.7E-68 T 25-04-2016 IPR026904 GidA associated domain 3 SMA_RS10355 8cceb7b07cfc2990e93c100fe452e83f 634 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 276 290 - T 25-04-2016 IPR020595 MnmG-related, conserved site SMA_RS10355 8cceb7b07cfc2990e93c100fe452e83f 634 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 371 394 - T 25-04-2016 IPR020595 MnmG-related, conserved site SMA_RS05315 4c03779b8246c72ffbbd4637d3c7510a 252 SMART SM00382 30 223 5.0E-12 T 25-04-2016 IPR003593 AAA+ ATPase domain SMA_RS05315 4c03779b8246c72ffbbd4637d3c7510a 252 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SMA_RS05315 4c03779b8246c72ffbbd4637d3c7510a 252 Pfam PF00005 ABC transporter 21 177 1.1E-32 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMA_RS05315 4c03779b8246c72ffbbd4637d3c7510a 252 SUPERFAMILY SSF52540 3 239 3.19E-58 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS05315 4c03779b8246c72ffbbd4637d3c7510a 252 Gene3D G3DSA:3.40.50.300 4 246 4.0E-67 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS05315 4c03779b8246c72ffbbd4637d3c7510a 252 PANTHER PTHR24220 7 249 4.0E-124 T 25-04-2016 SMA_RS05315 4c03779b8246c72ffbbd4637d3c7510a 252 PANTHER PTHR24220:SF585 7 249 4.0E-124 T 25-04-2016 SMA_RS05315 4c03779b8246c72ffbbd4637d3c7510a 252 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 6 252 6.2E-120 T 25-04-2016 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 SMA_RS00355 428ce7d033fe428fde96bc37e0d9a245 277 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 275 48.236 T 25-04-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 SMA_RS00355 428ce7d033fe428fde96bc37e0d9a245 277 SMART SM01382 124 253 5.2E-88 T 25-04-2016 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 SMA_RS00355 428ce7d033fe428fde96bc37e0d9a245 277 SMART SM01383 42 118 1.1E-46 T 25-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS00355 428ce7d033fe428fde96bc37e0d9a245 277 PANTHER PTHR13691 3 276 2.1E-146 T 25-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS00355 428ce7d033fe428fde96bc37e0d9a245 277 SUPERFAMILY SSF50249 3 125 6.51E-52 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMA_RS00355 428ce7d033fe428fde96bc37e0d9a245 277 PIRSF PIRSF002158 4 276 1.3E-98 T 25-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS00355 428ce7d033fe428fde96bc37e0d9a245 277 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 25-04-2016 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 SMA_RS00355 428ce7d033fe428fde96bc37e0d9a245 277 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 125 251 1.2E-55 T 25-04-2016 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 SMA_RS00355 428ce7d033fe428fde96bc37e0d9a245 277 Gene3D G3DSA:2.30.30.30 118 195 7.3E-35 T 25-04-2016 IPR014722 Ribosomal protein L2 domain 2 SMA_RS00355 428ce7d033fe428fde96bc37e0d9a245 277 Gene3D G3DSA:2.40.50.140 2 114 1.8E-52 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMA_RS00355 428ce7d033fe428fde96bc37e0d9a245 277 Gene3D G3DSA:4.10.950.10 196 274 6.2E-34 T 25-04-2016 IPR014726 Ribosomal protein L2, domain 3 SMA_RS00355 428ce7d033fe428fde96bc37e0d9a245 277 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 3 275 3.7E-136 T 25-04-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 SMA_RS00355 428ce7d033fe428fde96bc37e0d9a245 277 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 118 7.8E-35 T 25-04-2016 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS00355 428ce7d033fe428fde96bc37e0d9a245 277 SUPERFAMILY SSF50104 126 273 5.05E-58 T 25-04-2016 IPR008991 Translation protein SH3-like domain SMA_RS07035 29d5059ed112200cae984107ef8ba476 427 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 12 424 5.1E-134 T 25-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 SMA_RS07035 29d5059ed112200cae984107ef8ba476 427 Gene3D G3DSA:3.65.10.10 229 422 2.5E-55 T 25-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 SMA_RS07035 29d5059ed112200cae984107ef8ba476 427 PANTHER PTHR21090 4 425 2.8E-176 T 25-04-2016 SMA_RS07035 29d5059ed112200cae984107ef8ba476 427 ProSitePatterns PS00885 EPSP synthase signature 2. 337 355 - T 25-04-2016 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 SMA_RS07035 29d5059ed112200cae984107ef8ba476 427 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 6 421 2.3E-119 T 25-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 SMA_RS07035 29d5059ed112200cae984107ef8ba476 427 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 8 427 33.889 T 25-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 SMA_RS07035 29d5059ed112200cae984107ef8ba476 427 ProSitePatterns PS00104 EPSP synthase signature 1. 86 100 - T 25-04-2016 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 SMA_RS07035 29d5059ed112200cae984107ef8ba476 427 SUPERFAMILY SSF55205 3 422 1.6E-137 T 25-04-2016 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 SMA_RS07035 29d5059ed112200cae984107ef8ba476 427 PIRSF PIRSF000505 1 426 1.4E-114 T 25-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 SMA_RS07035 29d5059ed112200cae984107ef8ba476 427 PANTHER PTHR21090:SF5 4 425 2.8E-176 T 25-04-2016 SMA_RS07035 29d5059ed112200cae984107ef8ba476 427 Gene3D G3DSA:3.65.10.10 20 228 2.1E-60 T 25-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 SMA_RS08560 0bbfe00aad0c810fffa2bf195a66fde5 299 PIRSF PIRSF002854 1 287 2.2E-77 T 25-04-2016 IPR004872 Lipoprotein NlpA family SMA_RS08560 0bbfe00aad0c810fffa2bf195a66fde5 299 SUPERFAMILY SSF53850 36 286 3.29E-68 T 25-04-2016 SMA_RS08560 0bbfe00aad0c810fffa2bf195a66fde5 299 Pfam PF03180 NLPA lipoprotein 37 286 3.4E-85 T 25-04-2016 IPR004872 Lipoprotein NlpA family SMA_RS08560 0bbfe00aad0c810fffa2bf195a66fde5 299 Gene3D G3DSA:3.40.190.10 34 170 1.1E-46 T 25-04-2016 SMA_RS08560 0bbfe00aad0c810fffa2bf195a66fde5 299 PANTHER PTHR30429 3 287 3.6E-82 T 25-04-2016 IPR004872 Lipoprotein NlpA family SMA_RS08025 7e44251f7af03c2f4b76624e277216db 363 PIRSF PIRSF000525 1 363 2.0E-142 T 25-04-2016 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|UniPathway: UPA00135|UniPathway: UPA00244 SMA_RS08025 7e44251f7af03c2f4b76624e277216db 363 Gene3D G3DSA:3.90.1150.10 260 362 1.0E-37 T 25-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SMA_RS08025 7e44251f7af03c2f4b76624e277216db 363 PANTHER PTHR21152 3 363 3.4E-153 T 25-04-2016 SMA_RS08025 7e44251f7af03c2f4b76624e277216db 363 PANTHER PTHR21152:SF1 3 363 3.4E-153 T 25-04-2016 SMA_RS08025 7e44251f7af03c2f4b76624e277216db 363 Gene3D G3DSA:3.40.640.10 16 257 7.8E-97 T 25-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SMA_RS08025 7e44251f7af03c2f4b76624e277216db 363 TIGRFAM TIGR01364 serC_1: phosphoserine transaminase 3 361 4.4E-146 T 25-04-2016 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|UniPathway: UPA00135|UniPathway: UPA00244 SMA_RS08025 7e44251f7af03c2f4b76624e277216db 363 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 1 362 48.854 T 25-04-2016 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|UniPathway: UPA00135|UniPathway: UPA00244 SMA_RS08025 7e44251f7af03c2f4b76624e277216db 363 SUPERFAMILY SSF53383 2 360 1.89E-101 T 25-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SMA_RS08025 7e44251f7af03c2f4b76624e277216db 363 Pfam PF00266 Aminotransferase class-V 3 348 2.8E-44 T 25-04-2016 IPR000192 Aminotransferase class V domain SMA_RS01350 48b5a70e35318870abbb3f2cdfce7702 613 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 89 488 7.3E-57 T 25-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SMA_RS01350 48b5a70e35318870abbb3f2cdfce7702 613 SUPERFAMILY SSF55826 251 418 3.53E-33 T 25-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 SMA_RS01350 48b5a70e35318870abbb3f2cdfce7702 613 PRINTS PR01046 Prolyl-tRNA synthetase signature 139 150 8.4E-15 T 25-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 SMA_RS01350 48b5a70e35318870abbb3f2cdfce7702 613 PRINTS PR01046 Prolyl-tRNA synthetase signature 129 137 8.4E-15 T 25-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 SMA_RS01350 48b5a70e35318870abbb3f2cdfce7702 613 PRINTS PR01046 Prolyl-tRNA synthetase signature 99 110 8.4E-15 T 25-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 SMA_RS01350 48b5a70e35318870abbb3f2cdfce7702 613 PRINTS PR01046 Prolyl-tRNA synthetase signature 63 81 8.4E-15 T 25-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 SMA_RS01350 48b5a70e35318870abbb3f2cdfce7702 613 Gene3D G3DSA:3.90.960.10 287 417 1.1E-32 T 25-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 SMA_RS01350 48b5a70e35318870abbb3f2cdfce7702 613 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 247 606 2.6E-93 T 25-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 SMA_RS01350 48b5a70e35318870abbb3f2cdfce7702 613 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 209 1.4E-93 T 25-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 SMA_RS01350 48b5a70e35318870abbb3f2cdfce7702 613 PANTHER PTHR11451 428 612 2.7E-128 T 25-04-2016 SMA_RS01350 48b5a70e35318870abbb3f2cdfce7702 613 PANTHER PTHR11451 1 211 2.7E-128 T 25-04-2016 SMA_RS01350 48b5a70e35318870abbb3f2cdfce7702 613 PANTHER PTHR11451 250 277 2.7E-128 T 25-04-2016 SMA_RS01350 48b5a70e35318870abbb3f2cdfce7702 613 Pfam PF04073 Aminoacyl-tRNA editing domain 290 409 4.7E-26 T 25-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 SMA_RS01350 48b5a70e35318870abbb3f2cdfce7702 613 Gene3D G3DSA:3.30.930.10 2 223 2.1E-86 T 25-04-2016 SMA_RS01350 48b5a70e35318870abbb3f2cdfce7702 613 Gene3D G3DSA:3.30.930.10 436 489 2.1E-86 T 25-04-2016 SMA_RS01350 48b5a70e35318870abbb3f2cdfce7702 613 PANTHER PTHR11451:SF3 428 612 2.7E-128 T 25-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 SMA_RS01350 48b5a70e35318870abbb3f2cdfce7702 613 PANTHER PTHR11451:SF3 1 211 2.7E-128 T 25-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 SMA_RS01350 48b5a70e35318870abbb3f2cdfce7702 613 PANTHER PTHR11451:SF3 250 277 2.7E-128 T 25-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 SMA_RS01350 48b5a70e35318870abbb3f2cdfce7702 613 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 611 37.386 T 25-04-2016 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 SMA_RS01350 48b5a70e35318870abbb3f2cdfce7702 613 SUPERFAMILY SSF52954 506 608 5.4E-26 T 25-04-2016 IPR004154 Anticodon-binding SMA_RS01350 48b5a70e35318870abbb3f2cdfce7702 613 SUPERFAMILY SSF55681 436 520 3.82E-84 T 25-04-2016 SMA_RS01350 48b5a70e35318870abbb3f2cdfce7702 613 SUPERFAMILY SSF55681 4 223 3.82E-84 T 25-04-2016 SMA_RS01350 48b5a70e35318870abbb3f2cdfce7702 613 Pfam PF03129 Anticodon binding domain 517 606 2.9E-17 T 25-04-2016 IPR004154 Anticodon-binding SMA_RS01350 48b5a70e35318870abbb3f2cdfce7702 613 Gene3D G3DSA:3.40.50.800 509 611 6.8E-26 T 25-04-2016 IPR004154 Anticodon-binding SMA_RS07310 21f5067c4eaeaf77242f4c1cfdc1729a 827 SUPERFAMILY SSF53098 8 181 9.25E-48 T 25-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMA_RS07310 21f5067c4eaeaf77242f4c1cfdc1729a 827 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 5 171 1.7E-29 T 25-04-2016 IPR006054 DNA polymerase III, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SMA_RS07310 21f5067c4eaeaf77242f4c1cfdc1729a 827 Pfam PF00929 Exonuclease 11 163 1.3E-27 T 25-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III SMA_RS07310 21f5067c4eaeaf77242f4c1cfdc1729a 827 SMART SM00491 667 793 1.3E-9 T 25-04-2016 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 SMA_RS07310 21f5067c4eaeaf77242f4c1cfdc1729a 827 SMART SM00479 8 172 2.8E-40 T 25-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III SMA_RS07310 21f5067c4eaeaf77242f4c1cfdc1729a 827 SUPERFAMILY SSF52540 621 785 2.82E-22 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS07310 21f5067c4eaeaf77242f4c1cfdc1729a 827 SUPERFAMILY SSF52540 396 467 2.82E-22 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS07310 21f5067c4eaeaf77242f4c1cfdc1729a 827 SUPERFAMILY SSF52540 579 593 2.82E-22 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS07310 21f5067c4eaeaf77242f4c1cfdc1729a 827 SUPERFAMILY SSF52540 263 312 2.82E-22 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS07310 21f5067c4eaeaf77242f4c1cfdc1729a 827 Pfam PF13307 Helicase C-terminal domain 652 806 6.4E-26 T 25-04-2016 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 SMA_RS07310 21f5067c4eaeaf77242f4c1cfdc1729a 827 PANTHER PTHR30231 1 464 1.6E-145 T 25-04-2016 SMA_RS07310 21f5067c4eaeaf77242f4c1cfdc1729a 827 Gene3D G3DSA:3.40.50.300 757 790 8.5E-9 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS07310 21f5067c4eaeaf77242f4c1cfdc1729a 827 Gene3D G3DSA:3.40.50.300 634 724 8.5E-9 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS07310 21f5067c4eaeaf77242f4c1cfdc1729a 827 PANTHER PTHR30231:SF8 1 464 1.6E-145 T 25-04-2016 SMA_RS07310 21f5067c4eaeaf77242f4c1cfdc1729a 827 Pfam PF00270 DEAD/DEAH box helicase 265 317 1.4E-4 T 25-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 SMA_RS07310 21f5067c4eaeaf77242f4c1cfdc1729a 827 Gene3D G3DSA:3.30.420.10 3 172 2.2E-47 T 25-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMA_RS07310 21f5067c4eaeaf77242f4c1cfdc1729a 827 TIGRFAM TIGR01407 dinG_rel: putative DnaQ family exonuclease/DinG family helicase 8 500 6.0E-171 T 25-04-2016 IPR006310 DnaQ exonuclease/DinG helicase, predicted SMA_RS07310 21f5067c4eaeaf77242f4c1cfdc1729a 827 Gene3D G3DSA:3.40.50.300 391 472 7.1E-15 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS07310 21f5067c4eaeaf77242f4c1cfdc1729a 827 Gene3D G3DSA:3.40.50.300 264 323 7.1E-15 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS07310 21f5067c4eaeaf77242f4c1cfdc1729a 827 Gene3D G3DSA:3.40.50.300 581 603 7.1E-15 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS07310 21f5067c4eaeaf77242f4c1cfdc1729a 827 SMART SM00487 242 627 0.0068 T 25-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain SMA_RS06275 59323beaaad29ff0dad9ca542a72a8c9 404 SUPERFAMILY SSF143437 3 173 5.06E-52 T 25-04-2016 SMA_RS06275 59323beaaad29ff0dad9ca542a72a8c9 404 SUPERFAMILY SSF52402 174 387 8.6E-52 T 25-04-2016 SMA_RS06275 59323beaaad29ff0dad9ca542a72a8c9 404 Hamap MF_00021 tRNA sulfurtransferase [thiI]. 1 404 167.65 T 25-04-2016 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 UniPathway: UPA00060 SMA_RS06275 59323beaaad29ff0dad9ca542a72a8c9 404 Pfam PF02926 THUMP domain 50 162 8.1E-18 T 25-04-2016 IPR004114 THUMP domain GO:0003723 SMA_RS06275 59323beaaad29ff0dad9ca542a72a8c9 404 Pfam PF02568 Thiamine biosynthesis protein (ThiI) 175 370 1.8E-63 T 25-04-2016 IPR020536 Thil, AANH domain GO:0004810 UniPathway: UPA00060 SMA_RS06275 59323beaaad29ff0dad9ca542a72a8c9 404 PANTHER PTHR14911:SF16 1 400 2.4E-180 T 25-04-2016 SMA_RS06275 59323beaaad29ff0dad9ca542a72a8c9 404 SMART SM00981 74 165 1.3E-21 T 25-04-2016 IPR004114 THUMP domain GO:0003723 SMA_RS06275 59323beaaad29ff0dad9ca542a72a8c9 404 Gene3D G3DSA:3.40.50.620 173 333 1.2E-50 T 25-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SMA_RS06275 59323beaaad29ff0dad9ca542a72a8c9 404 PANTHER PTHR14911 1 400 2.4E-180 T 25-04-2016 SMA_RS06275 59323beaaad29ff0dad9ca542a72a8c9 404 TIGRFAM TIGR00342 TIGR00342: tRNA sulfurtransferase ThiI 6 372 1.9E-121 T 25-04-2016 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 UniPathway: UPA00060 SMA_RS00690 cdfdfdc0ef14a759851c0fe2c67a7422 313 SUPERFAMILY SSF52540 2 268 1.06E-54 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS00690 cdfdfdc0ef14a759851c0fe2c67a7422 313 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 197 211 - T 25-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 SMA_RS00690 cdfdfdc0ef14a759851c0fe2c67a7422 313 Pfam PF00437 Type II/IV secretion system protein 12 266 1.3E-45 T 25-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 SMA_RS00690 cdfdfdc0ef14a759851c0fe2c67a7422 313 PANTHER PTHR30258 1 267 1.3E-74 T 25-04-2016 SMA_RS00690 cdfdfdc0ef14a759851c0fe2c67a7422 313 Gene3D G3DSA:3.40.50.300 128 267 1.8E-51 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS00690 cdfdfdc0ef14a759851c0fe2c67a7422 313 Gene3D G3DSA:3.30.450.90 2 109 4.3E-20 T 25-04-2016 SMA_RS02890 7c1499aab32fa458569cc29c4f8bb5f5 363 SUPERFAMILY SSF55874 243 325 4.32E-9 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMA_RS02890 7c1499aab32fa458569cc29c4f8bb5f5 363 Gene3D G3DSA:3.30.565.10 242 332 3.3E-7 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMA_RS02890 7c1499aab32fa458569cc29c4f8bb5f5 363 Pfam PF07730 Histidine kinase 174 238 7.7E-17 T 25-04-2016 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 SMA_RS02890 7c1499aab32fa458569cc29c4f8bb5f5 363 PANTHER PTHR24421 1 358 4.8E-57 T 25-04-2016 SMA_RS02890 7c1499aab32fa458569cc29c4f8bb5f5 363 PANTHER PTHR24421:SF10 1 358 4.8E-57 T 25-04-2016 SMA_RS05560 a15217742dee650d13e4509d8621aa0c 633 TIGRFAM TIGR01995 PTS-II-ABC-beta: PTS system, beta-glucoside-specific IIABC component 6 630 1.1E-202 T 25-04-2016 IPR011297 Phosphotransferase system, beta-glucoside-specific IIABC component GO:0005886|GO:0008982|GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SMA_RS05560 a15217742dee650d13e4509d8621aa0c 633 SUPERFAMILY SSF51261 481 631 5.23E-54 T 25-04-2016 IPR011055 Duplicated hybrid motif SMA_RS05560 a15217742dee650d13e4509d8621aa0c 633 Gene3D G3DSA:3.30.1360.60 5 83 5.2E-28 T 25-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 SMA_RS05560 a15217742dee650d13e4509d8621aa0c 633 PANTHER PTHR30175 5 582 2.5E-168 T 25-04-2016 SMA_RS05560 a15217742dee650d13e4509d8621aa0c 633 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 549 561 - T 25-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SMA_RS05560 a15217742dee650d13e4509d8621aa0c 633 SUPERFAMILY SSF55604 8 83 3.27E-21 T 25-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 SMA_RS05560 a15217742dee650d13e4509d8621aa0c 633 Gene3D G3DSA:2.70.70.10 480 630 2.5E-60 T 25-04-2016 SMA_RS05560 a15217742dee650d13e4509d8621aa0c 633 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 486 610 3.7E-50 T 25-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SMA_RS05560 a15217742dee650d13e4509d8621aa0c 633 Pfam PF02378 Phosphotransferase system, EIIC 114 388 1.1E-27 T 25-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 SMA_RS05560 a15217742dee650d13e4509d8621aa0c 633 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 22 39 - T 25-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 SMA_RS05560 a15217742dee650d13e4509d8621aa0c 633 PANTHER PTHR30175:SF1 5 582 2.5E-168 T 25-04-2016 SMA_RS05560 a15217742dee650d13e4509d8621aa0c 633 Pfam PF00367 phosphotransferase system, EIIB 11 44 2.2E-13 T 25-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 SMA_RS05560 a15217742dee650d13e4509d8621aa0c 633 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 487 607 3.5E-45 T 25-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SMA_RS00680 07e23cea243bf072e3cab76c65fc4196 1212 Pfam PF00623 RNA polymerase Rpb1, domain 2 388 475 3.0E-29 T 25-04-2016 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SMA_RS00680 07e23cea243bf072e3cab76c65fc4196 1212 Pfam PF00623 RNA polymerase Rpb1, domain 2 334 378 1.5E-8 T 25-04-2016 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SMA_RS00680 07e23cea243bf072e3cab76c65fc4196 1212 Gene3D G3DSA:2.40.40.20 339 366 4.9E-38 T 25-04-2016 SMA_RS00680 07e23cea243bf072e3cab76c65fc4196 1212 Gene3D G3DSA:2.40.40.20 407 477 4.9E-38 T 25-04-2016 SMA_RS00680 07e23cea243bf072e3cab76c65fc4196 1212 SMART SM00663 225 504 6.2E-177 T 25-04-2016 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SMA_RS00680 07e23cea243bf072e3cab76c65fc4196 1212 PANTHER PTHR19376 2 541 0.0 T 25-04-2016 SMA_RS00680 07e23cea243bf072e3cab76c65fc4196 1212 PANTHER PTHR19376 1120 1180 0.0 T 25-04-2016 SMA_RS00680 07e23cea243bf072e3cab76c65fc4196 1212 Pfam PF04983 RNA polymerase Rpb1, domain 3 479 664 3.3E-35 T 25-04-2016 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SMA_RS00680 07e23cea243bf072e3cab76c65fc4196 1212 Pfam PF04998 RNA polymerase Rpb1, domain 5 771 994 7.2E-49 T 25-04-2016 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SMA_RS00680 07e23cea243bf072e3cab76c65fc4196 1212 Pfam PF04998 RNA polymerase Rpb1, domain 5 1009 1132 4.9E-12 T 25-04-2016 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SMA_RS00680 07e23cea243bf072e3cab76c65fc4196 1212 Pfam PF04997 RNA polymerase Rpb1, domain 1 5 332 3.2E-86 T 25-04-2016 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SMA_RS00680 07e23cea243bf072e3cab76c65fc4196 1212 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 10 1184 0.0 T 25-04-2016 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SMA_RS00680 07e23cea243bf072e3cab76c65fc4196 1212 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 5 1193 10.254 T 25-04-2016 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SMA_RS00680 07e23cea243bf072e3cab76c65fc4196 1212 SUPERFAMILY SSF64484 5 1184 0.0 T 25-04-2016 SMA_RS00680 07e23cea243bf072e3cab76c65fc4196 1212 PANTHER PTHR19376:SF32 1120 1180 0.0 T 25-04-2016 SMA_RS00680 07e23cea243bf072e3cab76c65fc4196 1212 PANTHER PTHR19376 559 1079 0.0 T 25-04-2016 SMA_RS00680 07e23cea243bf072e3cab76c65fc4196 1212 Pfam PF05000 RNA polymerase Rpb1, domain 4 704 760 6.5E-13 T 25-04-2016 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SMA_RS00680 07e23cea243bf072e3cab76c65fc4196 1212 Gene3D G3DSA:2.40.50.100 973 1029 1.1E-6 T 25-04-2016 SMA_RS00680 07e23cea243bf072e3cab76c65fc4196 1212 PANTHER PTHR19376:SF32 2 541 0.0 T 25-04-2016 SMA_RS00680 07e23cea243bf072e3cab76c65fc4196 1212 PANTHER PTHR19376:SF32 559 1079 0.0 T 25-04-2016 SMA_RS01200 8bed4cea6f0dc7609af5979b19041ae7 310 PIRSF PIRSF000535 1 310 2.5E-135 T 25-04-2016 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 SMA_RS01200 8bed4cea6f0dc7609af5979b19041ae7 310 TIGRFAM TIGR03168 1-PFK: hexose kinase, 1-phosphofructokinase family 2 308 4.2E-99 T 25-04-2016 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 SMA_RS01200 8bed4cea6f0dc7609af5979b19041ae7 310 PANTHER PTHR10584 1 310 5.8E-156 T 25-04-2016 SMA_RS01200 8bed4cea6f0dc7609af5979b19041ae7 310 Pfam PF00294 pfkB family carbohydrate kinase 8 292 6.9E-59 T 25-04-2016 IPR011611 Carbohydrate kinase PfkB SMA_RS01200 8bed4cea6f0dc7609af5979b19041ae7 310 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 36 60 - T 25-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 SMA_RS01200 8bed4cea6f0dc7609af5979b19041ae7 310 Gene3D G3DSA:3.40.1190.20 35 309 1.6E-82 T 25-04-2016 IPR029056 Ribokinase-like SMA_RS01200 8bed4cea6f0dc7609af5979b19041ae7 310 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 248 261 - T 25-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 SMA_RS01200 8bed4cea6f0dc7609af5979b19041ae7 310 Hamap MF_01557 Tagatose-6-phosphate kinase [lacC]. 1 310 58.95 T 25-04-2016 IPR005926 Tagatose-6-phosphate kinase GO:0009024|GO:0019512 KEGG: 00052+2.7.1.144|KEGG: 00710+2.7.1.14|MetaCyc: PWY-7077|MetaCyc: PWY-7395|UniPathway: UPA00704 SMA_RS01200 8bed4cea6f0dc7609af5979b19041ae7 310 Gene3D G3DSA:2.20.150.10 9 34 4.3E-4 T 25-04-2016 IPR023314 Tagatose-6-phosphate kinase/1-phosphofructokinase N-terminal domain KEGG: 00052+2.7.1.144|KEGG: 00710+2.7.1.14|MetaCyc: PWY-7077|MetaCyc: PWY-7395|UniPathway: UPA00704 SMA_RS01200 8bed4cea6f0dc7609af5979b19041ae7 310 TIGRFAM TIGR01231 lacC: tagatose-6-phosphate kinase 1 310 3.9E-156 T 25-04-2016 IPR005926 Tagatose-6-phosphate kinase GO:0009024|GO:0019512 KEGG: 00052+2.7.1.144|KEGG: 00710+2.7.1.14|MetaCyc: PWY-7077|MetaCyc: PWY-7395|UniPathway: UPA00704 SMA_RS01200 8bed4cea6f0dc7609af5979b19041ae7 310 SUPERFAMILY SSF53613 1 287 1.04E-66 T 25-04-2016 IPR029056 Ribokinase-like SMA_RS01200 8bed4cea6f0dc7609af5979b19041ae7 310 PANTHER PTHR10584:SF178 1 310 5.8E-156 T 25-04-2016 SMA_RS04315 2936d0d6e77a101b7d0ff96e90ee3988 224 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 1 221 34.136 T 25-04-2016 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 SMA_RS04315 2936d0d6e77a101b7d0ff96e90ee3988 224 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 50 217 7.5E-60 T 25-04-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 SMA_RS04315 2936d0d6e77a101b7d0ff96e90ee3988 224 SUPERFAMILY SSF75445 127 203 9.55E-22 T 25-04-2016 SMA_RS04315 2936d0d6e77a101b7d0ff96e90ee3988 224 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 4 218 2.0E-83 T 25-04-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 SMA_RS04315 2936d0d6e77a101b7d0ff96e90ee3988 224 PANTHER PTHR11934 1 224 1.2E-93 T 25-04-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 SMA_RS04315 2936d0d6e77a101b7d0ff96e90ee3988 224 SUPERFAMILY SSF100950 2 148 1.84E-43 T 25-04-2016 SMA_RS04315 2936d0d6e77a101b7d0ff96e90ee3988 224 Gene3D G3DSA:3.40.50.1360 2 141 4.1E-59 T 25-04-2016 SMA_RS04315 2936d0d6e77a101b7d0ff96e90ee3988 224 Gene3D G3DSA:3.30.70.260 142 201 2.7E-25 T 25-04-2016 SMA_RS01245 a1eebf40a7ecc6f8c90b50b8b5c59e32 105 TIGRFAM TIGR00823 EIIA-LAC: PTS system, lactose-specific IIa component 4 102 3.2E-46 T 25-04-2016 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SMA_RS01245 a1eebf40a7ecc6f8c90b50b8b5c59e32 105 SUPERFAMILY SSF46973 1 102 4.84E-33 T 25-04-2016 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SMA_RS01245 a1eebf40a7ecc6f8c90b50b8b5c59e32 105 Gene3D G3DSA:1.20.58.80 2 102 4.3E-36 T 25-04-2016 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SMA_RS01245 a1eebf40a7ecc6f8c90b50b8b5c59e32 105 Pfam PF02255 PTS system, Lactose/Cellobiose specific IIA subunit 10 101 3.4E-33 T 25-04-2016 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SMA_RS01245 a1eebf40a7ecc6f8c90b50b8b5c59e32 105 PANTHER PTHR34382 1 105 2.3E-71 T 25-04-2016 SMA_RS01245 a1eebf40a7ecc6f8c90b50b8b5c59e32 105 PANTHER PTHR34382:SF3 1 105 2.3E-71 T 25-04-2016 SMA_RS01245 a1eebf40a7ecc6f8c90b50b8b5c59e32 105 PIRSF PIRSF000699 1 105 1.7E-39 T 25-04-2016 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SMA_RS09015 f67716cf8a032bc82e7423997f4b6830 306 SUPERFAMILY SSF56601 4 295 1.91E-62 T 25-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SMA_RS09015 f67716cf8a032bc82e7423997f4b6830 306 Gene3D G3DSA:3.40.710.10 5 293 1.5E-54 T 25-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SMA_RS09015 f67716cf8a032bc82e7423997f4b6830 306 Pfam PF00144 Beta-lactamase 18 293 1.1E-45 T 25-04-2016 IPR001466 Beta-lactamase-related SMA_RS09015 f67716cf8a032bc82e7423997f4b6830 306 PANTHER PTHR22935 1 298 4.2E-49 T 25-04-2016 SMA_RS09015 f67716cf8a032bc82e7423997f4b6830 306 PANTHER PTHR22935:SF10 1 298 4.2E-49 T 25-04-2016 SMA_RS02540 02a0875213d884b6421bfaf4f0376fd2 208 Pfam PF01205 Uncharacterized protein family UPF0029 17 122 1.4E-30 T 25-04-2016 IPR001498 Impact, N-terminal SMA_RS02540 02a0875213d884b6421bfaf4f0376fd2 208 SUPERFAMILY SSF54980 136 196 1.21E-6 T 25-04-2016 IPR009022 Elongation factor G, III-V domain SMA_RS02540 02a0875213d884b6421bfaf4f0376fd2 208 TIGRFAM TIGR00257 IMPACT_YIGZ: uncharacterized protein, YigZ family 2 196 2.3E-62 T 25-04-2016 IPR015796 Impact family, bacterial/archaeal SMA_RS02540 02a0875213d884b6421bfaf4f0376fd2 208 Pfam PF09186 Domain of unknown function (DUF1949) 138 193 4.1E-9 T 25-04-2016 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal SMA_RS02540 02a0875213d884b6421bfaf4f0376fd2 208 Gene3D G3DSA:3.30.230.30 3 129 6.1E-49 T 25-04-2016 IPR001498 Impact, N-terminal SMA_RS02540 02a0875213d884b6421bfaf4f0376fd2 208 SUPERFAMILY SSF54211 2 129 1.59E-43 T 25-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SMA_RS02540 02a0875213d884b6421bfaf4f0376fd2 208 ProSitePatterns PS00910 Uncharacterized protein family UPF0029 signature. 77 106 - T 25-04-2016 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site SMA_RS02540 02a0875213d884b6421bfaf4f0376fd2 208 PANTHER PTHR16301:SF0 2 194 3.4E-58 T 25-04-2016 SMA_RS02540 02a0875213d884b6421bfaf4f0376fd2 208 PANTHER PTHR16301 2 194 3.4E-58 T 25-04-2016 IPR023582 Impact family SMA_RS02540 02a0875213d884b6421bfaf4f0376fd2 208 Gene3D G3DSA:3.30.70.240 136 202 2.6E-6 T 25-04-2016 IPR000640 Translation elongation factor EFG, V domain SMA_RS05275 9c8491beb50cad7031938539e6ded8cb 197 Gene3D G3DSA:3.40.50.150 17 190 5.4E-34 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMA_RS05275 9c8491beb50cad7031938539e6ded8cb 197 PANTHER PTHR18895 1 192 1.1E-81 T 25-04-2016 SMA_RS05275 9c8491beb50cad7031938539e6ded8cb 197 SUPERFAMILY SSF53335 18 194 1.17E-37 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMA_RS05275 9c8491beb50cad7031938539e6ded8cb 197 PANTHER PTHR18895:SF72 1 192 1.1E-81 T 25-04-2016 SMA_RS05275 9c8491beb50cad7031938539e6ded8cb 197 Pfam PF05175 Methyltransferase small domain 28 192 2.4E-48 T 25-04-2016 IPR007848 Methyltransferase small domain GO:0008168 SMA_RS05275 9c8491beb50cad7031938539e6ded8cb 197 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 122 134 2.9E-5 T 25-04-2016 SMA_RS05275 9c8491beb50cad7031938539e6ded8cb 197 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 136 160 2.9E-5 T 25-04-2016 SMA_RS05275 9c8491beb50cad7031938539e6ded8cb 197 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 61 75 2.9E-5 T 25-04-2016 SMA_RS06230 bcf69144c5c9a5d2845e2cf35598de83 173 PANTHER PTHR11608 1 173 4.5E-84 T 25-04-2016 SMA_RS06230 bcf69144c5c9a5d2845e2cf35598de83 173 SUPERFAMILY SSF53271 4 167 1.02E-37 T 25-04-2016 IPR029057 Phosphoribosyltransferase-like SMA_RS06230 bcf69144c5c9a5d2845e2cf35598de83 173 Gene3D G3DSA:3.40.50.2020 3 167 9.8E-47 T 25-04-2016 IPR029057 Phosphoribosyltransferase-like SMA_RS06230 bcf69144c5c9a5d2845e2cf35598de83 173 Pfam PF00156 Phosphoribosyl transferase domain 8 146 1.0E-20 T 25-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 SMA_RS06230 bcf69144c5c9a5d2845e2cf35598de83 173 Hamap MF_01219 Bifunctional protein PyrR [pyrR]. 3 171 36.009 T 25-04-2016 IPR023050 Bifunctional protein PyrR KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 SMA_RS03015 d8e07c4c9deac0d5eaf370c22fffa216 451 SUPERFAMILY SSF53244 309 447 2.2E-38 T 25-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SMA_RS03015 d8e07c4c9deac0d5eaf370c22fffa216 451 PANTHER PTHR23135:SF2 1 451 2.2E-167 T 25-04-2016 SMA_RS03015 d8e07c4c9deac0d5eaf370c22fffa216 451 Gene3D G3DSA:3.90.190.20 311 443 4.5E-43 T 25-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SMA_RS03015 d8e07c4c9deac0d5eaf370c22fffa216 451 SUPERFAMILY SSF51984 10 100 3.53E-18 T 25-04-2016 SMA_RS03015 d8e07c4c9deac0d5eaf370c22fffa216 451 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 11 446 5.0E-128 T 25-04-2016 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SMA_RS03015 d8e07c4c9deac0d5eaf370c22fffa216 451 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 10 448 35.821 T 25-04-2016 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SMA_RS03015 d8e07c4c9deac0d5eaf370c22fffa216 451 PANTHER PTHR23135 1 451 2.2E-167 T 25-04-2016 SMA_RS03015 d8e07c4c9deac0d5eaf370c22fffa216 451 Gene3D G3DSA:3.40.1190.10 102 309 4.6E-60 T 25-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SMA_RS03015 d8e07c4c9deac0d5eaf370c22fffa216 451 Pfam PF08245 Mur ligase middle domain 117 290 3.7E-35 T 25-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SMA_RS03015 d8e07c4c9deac0d5eaf370c22fffa216 451 SUPERFAMILY SSF53623 103 307 1.14E-55 T 25-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SMA_RS03015 d8e07c4c9deac0d5eaf370c22fffa216 451 Pfam PF02875 Mur ligase family, glutamate ligase domain 310 385 2.9E-10 T 25-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SMA_RS03015 d8e07c4c9deac0d5eaf370c22fffa216 451 Gene3D G3DSA:3.40.50.720 8 100 4.6E-19 T 25-04-2016 IPR016040 NAD(P)-binding domain SMA_RS05120 c99b71520365e898ce09ebeab674c146 284 PANTHER PTHR11089 1 278 1.8E-70 T 25-04-2016 SMA_RS05120 c99b71520365e898ce09ebeab674c146 284 Gene3D G3DSA:1.10.1580.10 181 268 1.6E-24 T 25-04-2016 IPR023179 GTP-binding protein, orthogonal bundle domain SMA_RS05120 c99b71520365e898ce09ebeab674c146 284 TIGRFAM TIGR03596 GTPase_YlqF: ribosome biogenesis GTP-binding protein YlqF 4 274 1.1E-107 T 25-04-2016 IPR019991 GTP-binding protein, ribosome biogenesis SMA_RS05120 c99b71520365e898ce09ebeab674c146 284 SUPERFAMILY SSF52540 10 190 5.55E-46 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS05120 c99b71520365e898ce09ebeab674c146 284 Gene3D G3DSA:3.40.50.300 16 178 3.3E-38 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS05120 c99b71520365e898ce09ebeab674c146 284 PIRSF PIRSF006230 1 278 7.4E-98 T 25-04-2016 IPR016478 GTPase, MTG1 SMA_RS05120 c99b71520365e898ce09ebeab674c146 284 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 124 144 6.0E-5 T 25-04-2016 IPR006073 GTP binding domain GO:0005525 SMA_RS05120 c99b71520365e898ce09ebeab674c146 284 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 170 185 6.0E-5 T 25-04-2016 IPR006073 GTP binding domain GO:0005525 SMA_RS05120 c99b71520365e898ce09ebeab674c146 284 Pfam PF01926 50S ribosome-binding GTPase 124 193 3.5E-15 T 25-04-2016 IPR006073 GTP binding domain GO:0005525 SMA_RS04660 811ff5693a86eecc058de85a855a83b1 109 PANTHER PTHR30305 1 108 7.0E-75 T 25-04-2016 SMA_RS04660 811ff5693a86eecc058de85a855a83b1 109 SUPERFAMILY SSF82057 37 108 5.04E-27 T 25-04-2016 SMA_RS04660 811ff5693a86eecc058de85a855a83b1 109 Gene3D G3DSA:2.20.25.10 1 38 4.1E-21 T 25-04-2016 SMA_RS04660 811ff5693a86eecc058de85a855a83b1 109 TIGRFAM TIGR00686 phnA: putative alkylphosphonate utilization operon protein PhnA 2 108 8.0E-48 T 25-04-2016 IPR004624 PhnA protein SMA_RS04660 811ff5693a86eecc058de85a855a83b1 109 SUPERFAMILY SSF57783 1 35 1.87E-14 T 25-04-2016 SMA_RS04660 811ff5693a86eecc058de85a855a83b1 109 Pfam PF08274 PhnA Zinc-Ribbon 2 30 3.8E-15 T 25-04-2016 IPR013987 PhnA protein, N-terminal SMA_RS04660 811ff5693a86eecc058de85a855a83b1 109 Pfam PF03831 PhnA domain 42 108 1.6E-32 T 25-04-2016 IPR013988 PhnA protein, C-terminal SMA_RS04660 811ff5693a86eecc058de85a855a83b1 109 Gene3D G3DSA:2.30.30.40 40 109 5.2E-36 T 25-04-2016 SMA_RS04445 33f3658ec34e77ad1aac378227757fdb 284 TIGRFAM TIGR01214 rmlD: dTDP-4-dehydrorhamnose reductase 2 279 7.0E-84 T 25-04-2016 IPR005913 dTDP-4-dehydrorhamnose reductase family SMA_RS04445 33f3658ec34e77ad1aac378227757fdb 284 Gene3D G3DSA:3.40.50.720 2 229 1.4E-60 T 25-04-2016 IPR016040 NAD(P)-binding domain SMA_RS04445 33f3658ec34e77ad1aac378227757fdb 284 PANTHER PTHR10491:SF4 1 280 2.5E-95 T 25-04-2016 SMA_RS04445 33f3658ec34e77ad1aac378227757fdb 284 PANTHER PTHR10491 1 280 2.5E-95 T 25-04-2016 IPR005913 dTDP-4-dehydrorhamnose reductase family SMA_RS04445 33f3658ec34e77ad1aac378227757fdb 284 Pfam PF04321 RmlD substrate binding domain 2 280 6.6E-108 T 25-04-2016 IPR029903 RmlD-like substrate binding domain SMA_RS04445 33f3658ec34e77ad1aac378227757fdb 284 SUPERFAMILY SSF51735 2 280 3.38E-85 T 25-04-2016 IPR016040 NAD(P)-binding domain SMA_RS06160 60c0c4dd67db69d1eea756ac1aa9c108 868 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 324 330 - T 25-04-2016 IPR018303 P-type ATPase, phosphorylation site SMA_RS06160 60c0c4dd67db69d1eea756ac1aa9c108 868 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 504 515 4.6E-38 T 25-04-2016 SMA_RS06160 60c0c4dd67db69d1eea756ac1aa9c108 868 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 526 536 4.6E-38 T 25-04-2016 SMA_RS06160 60c0c4dd67db69d1eea756ac1aa9c108 868 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 630 642 4.6E-38 T 25-04-2016 SMA_RS06160 60c0c4dd67db69d1eea756ac1aa9c108 868 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 606 625 4.6E-38 T 25-04-2016 SMA_RS06160 60c0c4dd67db69d1eea756ac1aa9c108 868 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 322 336 4.6E-38 T 25-04-2016 SMA_RS06160 60c0c4dd67db69d1eea756ac1aa9c108 868 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 160 174 4.6E-38 T 25-04-2016 SMA_RS06160 60c0c4dd67db69d1eea756ac1aa9c108 868 PANTHER PTHR24093:SF329 3 866 0.0 T 25-04-2016 SMA_RS06160 60c0c4dd67db69d1eea756ac1aa9c108 868 Pfam PF00122 E1-E2 ATPase 80 313 2.3E-64 T 25-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 SMA_RS06160 60c0c4dd67db69d1eea756ac1aa9c108 868 Gene3D G3DSA:3.40.1110.10 313 511 1.3E-58 T 25-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 SMA_RS06160 60c0c4dd67db69d1eea756ac1aa9c108 868 PANTHER PTHR24093 3 866 0.0 T 25-04-2016 SMA_RS06160 60c0c4dd67db69d1eea756ac1aa9c108 868 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 214 358 2.9E-26 T 25-04-2016 IPR001757 P-type ATPase GO:0016021 SMA_RS06160 60c0c4dd67db69d1eea756ac1aa9c108 868 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 81 198 1.5E-18 T 25-04-2016 IPR001757 P-type ATPase GO:0016021 SMA_RS06160 60c0c4dd67db69d1eea756ac1aa9c108 868 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 577 689 1.5E-30 T 25-04-2016 IPR001757 P-type ATPase GO:0016021 SMA_RS06160 60c0c4dd67db69d1eea756ac1aa9c108 868 SUPERFAMILY SSF81665 2 113 2.62E-108 T 25-04-2016 SMA_RS06160 60c0c4dd67db69d1eea756ac1aa9c108 868 SUPERFAMILY SSF81665 656 866 2.62E-108 T 25-04-2016 SMA_RS06160 60c0c4dd67db69d1eea756ac1aa9c108 868 SUPERFAMILY SSF81665 223 316 2.62E-108 T 25-04-2016 SMA_RS06160 60c0c4dd67db69d1eea756ac1aa9c108 868 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 465 483 7.8E-21 T 25-04-2016 IPR001757 P-type ATPase GO:0016021 SMA_RS06160 60c0c4dd67db69d1eea756ac1aa9c108 868 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 606 622 7.8E-21 T 25-04-2016 IPR001757 P-type ATPase GO:0016021 SMA_RS06160 60c0c4dd67db69d1eea756ac1aa9c108 868 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 578 594 7.8E-21 T 25-04-2016 IPR001757 P-type ATPase GO:0016021 SMA_RS06160 60c0c4dd67db69d1eea756ac1aa9c108 868 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 638 663 7.8E-21 T 25-04-2016 IPR001757 P-type ATPase GO:0016021 SMA_RS06160 60c0c4dd67db69d1eea756ac1aa9c108 868 Gene3D G3DSA:2.70.150.10 16 54 1.2E-37 T 25-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 SMA_RS06160 60c0c4dd67db69d1eea756ac1aa9c108 868 Gene3D G3DSA:2.70.150.10 108 222 1.2E-37 T 25-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 SMA_RS06160 60c0c4dd67db69d1eea756ac1aa9c108 868 Pfam PF00689 Cation transporting ATPase, C-terminus 696 864 2.0E-37 T 25-04-2016 IPR006068 Cation-transporting P-type ATPase, C-terminal SMA_RS06160 60c0c4dd67db69d1eea756ac1aa9c108 868 SUPERFAMILY SSF81653 114 222 5.1E-26 T 25-04-2016 SMA_RS06160 60c0c4dd67db69d1eea756ac1aa9c108 868 SUPERFAMILY SSF56784 462 715 3.3E-54 T 25-04-2016 IPR023214 HAD-like domain SMA_RS06160 60c0c4dd67db69d1eea756ac1aa9c108 868 SUPERFAMILY SSF56784 320 340 3.3E-54 T 25-04-2016 IPR023214 HAD-like domain SMA_RS06160 60c0c4dd67db69d1eea756ac1aa9c108 868 Gene3D G3DSA:1.20.1110.10 575 866 5.1E-99 T 25-04-2016 IPR023298 P-type ATPase, transmembrane domain SMA_RS06160 60c0c4dd67db69d1eea756ac1aa9c108 868 Gene3D G3DSA:1.20.1110.10 55 107 5.1E-99 T 25-04-2016 IPR023298 P-type ATPase, transmembrane domain SMA_RS06160 60c0c4dd67db69d1eea756ac1aa9c108 868 Pfam PF00690 Cation transporter/ATPase, N-terminus 5 70 3.7E-21 T 25-04-2016 IPR004014 Cation-transporting P-type ATPase, N-terminal SMA_RS06160 60c0c4dd67db69d1eea756ac1aa9c108 868 Pfam PF13246 Cation transport ATPase (P-type) 361 448 3.8E-20 T 25-04-2016 SMA_RS06160 60c0c4dd67db69d1eea756ac1aa9c108 868 SMART SM00831 2 75 6.4E-26 T 25-04-2016 IPR004014 Cation-transporting P-type ATPase, N-terminal SMA_RS06160 60c0c4dd67db69d1eea756ac1aa9c108 868 SUPERFAMILY SSF81660 331 512 7.19E-49 T 25-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 SMA_RS07565 01fb00282cdc756bdb834bf5ca6a90e2 147 SMART SM00731 1 142 6.9E-56 T 25-04-2016 IPR006640 SprT-like SMA_RS07565 01fb00282cdc756bdb834bf5ca6a90e2 147 PANTHER PTHR41243:SF1 1 147 1.3E-64 T 25-04-2016 SMA_RS07565 01fb00282cdc756bdb834bf5ca6a90e2 147 Hamap MF_00745 Protein SprT-like. 1 142 38.508 T 25-04-2016 IPR023524 Uncharacterised protein family SprT-like SMA_RS07565 01fb00282cdc756bdb834bf5ca6a90e2 147 Pfam PF10263 SprT-like family 5 141 5.5E-22 T 25-04-2016 IPR006640 SprT-like SMA_RS07565 01fb00282cdc756bdb834bf5ca6a90e2 147 PANTHER PTHR41243 1 147 1.3E-64 T 25-04-2016 SMA_RS05860 76f2da6b788bb76cbd314931c24e631c 335 Gene3D G3DSA:3.30.70.890 200 330 1.0E-36 T 25-04-2016 IPR013750 GHMP kinase, C-terminal domain SMA_RS05860 76f2da6b788bb76cbd314931c24e631c 335 Pfam PF00288 GHMP kinases N terminal domain 92 158 4.7E-9 T 25-04-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 SMA_RS05860 76f2da6b788bb76cbd314931c24e631c 335 Gene3D G3DSA:3.30.230.10 4 192 4.7E-68 T 25-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SMA_RS05860 76f2da6b788bb76cbd314931c24e631c 335 SUPERFAMILY SSF55060 200 329 6.62E-27 T 25-04-2016 IPR013750 GHMP kinase, C-terminal domain SMA_RS05860 76f2da6b788bb76cbd314931c24e631c 335 TIGRFAM TIGR01220 Pmev_kin_Gr_pos: phosphomevalonate kinase 4 326 6.0E-62 T 25-04-2016 IPR005917 Phosphomevalonate kinase, Gram-positive KEGG: 00900+2.7.4.2|MetaCyc: PWY-7391|MetaCyc: PWY-922|UniPathway: UPA00057 SMA_RS05860 76f2da6b788bb76cbd314931c24e631c 335 SUPERFAMILY SSF54211 4 212 2.5E-45 T 25-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SMA_RS09215 2f5cec18289125f5b40a44d2a3d36585 209 SUPERFAMILY SSF63999 1 128 5.89E-32 T 25-04-2016 IPR007371 Thiamin pyrophosphokinase, catalytic domain GO:0004788|GO:0005524|GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356 SMA_RS09215 2f5cec18289125f5b40a44d2a3d36585 209 PANTHER PTHR41299 1 209 1.1E-44 T 25-04-2016 SMA_RS09215 2f5cec18289125f5b40a44d2a3d36585 209 Pfam PF04263 Thiamin pyrophosphokinase, catalytic domain 20 110 2.8E-18 T 25-04-2016 IPR007371 Thiamin pyrophosphokinase, catalytic domain GO:0004788|GO:0005524|GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356 SMA_RS09215 2f5cec18289125f5b40a44d2a3d36585 209 SMART SM00983 139 202 1.4E-18 T 25-04-2016 IPR007373 Thiamin pyrophosphokinase, vitamin B1-binding domain GO:0009229|GO:0030975 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|UniPathway: UPA00060 SMA_RS09215 2f5cec18289125f5b40a44d2a3d36585 209 Gene3D G3DSA:3.40.50.10240 2 113 3.7E-26 T 25-04-2016 IPR007371 Thiamin pyrophosphokinase, catalytic domain GO:0004788|GO:0005524|GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356 SMA_RS09215 2f5cec18289125f5b40a44d2a3d36585 209 TIGRFAM TIGR01378 thi_PPkinase: thiamine pyrophosphokinase 13 204 3.7E-54 T 25-04-2016 IPR006282 Thiamin pyrophosphokinase GO:0004788|GO:0006772 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|UniPathway: UPA00060 SMA_RS09215 2f5cec18289125f5b40a44d2a3d36585 209 PANTHER PTHR41299:SF1 1 209 1.1E-44 T 25-04-2016 SMA_RS09215 2f5cec18289125f5b40a44d2a3d36585 209 Pfam PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain 146 201 1.6E-8 T 25-04-2016 IPR007373 Thiamin pyrophosphokinase, vitamin B1-binding domain GO:0009229|GO:0030975 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|UniPathway: UPA00060 SMA_RS01250 882537f24f94b5ae786e8c29d0f88d80 566 TIGRFAM TIGR00394 lac_pts_IIC: PTS system, lactose-specific IIC component 11 422 3.8E-239 T 25-04-2016 IPR004801 Phosphotransferase system, lactose-specific IIC component GO:0008982|GO:0016021|GO:0022869 SMA_RS01250 882537f24f94b5ae786e8c29d0f88d80 566 TIGRFAM TIGR00853 pts-lac: PTS system, lactose/cellobiose family IIB component 421 560 1.2E-60 T 25-04-2016 IPR013012 Phosphotransferase system, EIIB component, type 3 GO:0008982|GO:0009401 SMA_RS01250 882537f24f94b5ae786e8c29d0f88d80 566 PANTHER PTHR33989:SF6 1 440 1.3E-250 T 25-04-2016 SMA_RS01250 882537f24f94b5ae786e8c29d0f88d80 566 SUPERFAMILY SSF52794 465 565 1.6E-18 T 25-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 SMA_RS01250 882537f24f94b5ae786e8c29d0f88d80 566 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 13 422 4.1E-78 T 25-04-2016 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 SMA_RS01250 882537f24f94b5ae786e8c29d0f88d80 566 PANTHER PTHR33989 1 440 1.3E-250 T 25-04-2016 SMA_RS01250 882537f24f94b5ae786e8c29d0f88d80 566 Pfam PF02378 Phosphotransferase system, EIIC 28 348 1.1E-72 T 25-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 SMA_RS01250 882537f24f94b5ae786e8c29d0f88d80 566 Gene3D G3DSA:3.40.50.270 463 565 4.8E-22 T 25-04-2016 SMA_RS01250 882537f24f94b5ae786e8c29d0f88d80 566 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 466 534 7.8E-10 T 25-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 SMA_RS03720 b97507e211bed897142795a4c03820d7 652 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 582 650 7.4E-14 T 25-04-2016 IPR001357 BRCT domain SMA_RS03720 b97507e211bed897142795a4c03820d7 652 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 319 334 - T 25-04-2016 IPR033136 NAD-dependent DNA ligase, conserved site SMA_RS03720 b97507e211bed897142795a4c03820d7 652 PANTHER PTHR23389 1 510 1.6E-183 T 25-04-2016 SMA_RS03720 b97507e211bed897142795a4c03820d7 652 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 8 647 3.8E-245 T 25-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 SMA_RS03720 b97507e211bed897142795a4c03820d7 652 SUPERFAMILY SSF56091 2 306 8.1E-114 T 25-04-2016 SMA_RS03720 b97507e211bed897142795a4c03820d7 652 SMART SM00278 530 549 270.0 T 25-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 SMA_RS03720 b97507e211bed897142795a4c03820d7 652 SMART SM00278 466 485 0.11 T 25-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 SMA_RS03720 b97507e211bed897142795a4c03820d7 652 SMART SM00278 432 451 20.0 T 25-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 SMA_RS03720 b97507e211bed897142795a4c03820d7 652 PIRSF PIRSF001604 1 652 8.5E-245 T 25-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 SMA_RS03720 b97507e211bed897142795a4c03820d7 652 Gene3D G3DSA:1.10.150.20 490 570 1.9E-23 T 25-04-2016 SMA_RS03720 b97507e211bed897142795a4c03820d7 652 Gene3D G3DSA:3.30.470.30 113 239 8.9E-44 T 25-04-2016 SMA_RS03720 b97507e211bed897142795a4c03820d7 652 Gene3D G3DSA:1.10.287.610 2 64 5.4E-27 T 25-04-2016 SMA_RS03720 b97507e211bed897142795a4c03820d7 652 Pfam PF14520 Helix-hairpin-helix domain 432 486 5.5E-8 T 25-04-2016 SMA_RS03720 b97507e211bed897142795a4c03820d7 652 Gene3D G3DSA:2.40.50.140 308 379 2.8E-33 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMA_RS03720 b97507e211bed897142795a4c03820d7 652 SMART SM00532 2 434 3.8E-241 T 25-04-2016 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 SMA_RS03720 b97507e211bed897142795a4c03820d7 652 SUPERFAMILY SSF52113 581 651 6.92E-19 T 25-04-2016 IPR001357 BRCT domain SMA_RS03720 b97507e211bed897142795a4c03820d7 652 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 2 306 8.5E-117 T 25-04-2016 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 SMA_RS03720 b97507e211bed897142795a4c03820d7 652 SMART SM00292 579 652 4.2E-8 T 25-04-2016 IPR001357 BRCT domain SMA_RS03720 b97507e211bed897142795a4c03820d7 652 SUPERFAMILY SSF47781 391 571 1.11E-57 T 25-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 SMA_RS03720 b97507e211bed897142795a4c03820d7 652 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 310 385 2.2E-34 T 25-04-2016 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 SMA_RS03720 b97507e211bed897142795a4c03820d7 652 Gene3D G3DSA:3.40.50.10190 580 651 2.6E-23 T 25-04-2016 IPR001357 BRCT domain SMA_RS03720 b97507e211bed897142795a4c03820d7 652 Hamap MF_01588 DNA ligase [ligA]. 1 652 49.213 T 25-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 SMA_RS03720 b97507e211bed897142795a4c03820d7 652 PANTHER PTHR23389:SF9 1 510 1.6E-183 T 25-04-2016 SMA_RS03720 b97507e211bed897142795a4c03820d7 652 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 395 419 2.2E-8 T 25-04-2016 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 SMA_RS03720 b97507e211bed897142795a4c03820d7 652 Pfam PF12826 Helix-hairpin-helix motif 496 558 8.3E-18 T 25-04-2016 SMA_RS03720 b97507e211bed897142795a4c03820d7 652 SUPERFAMILY SSF50249 306 386 2.23E-27 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMA_RS03720 b97507e211bed897142795a4c03820d7 652 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 109 138 - T 25-04-2016 IPR018239 NAD-dependent DNA ligase, active site SMA_RS03720 b97507e211bed897142795a4c03820d7 652 Gene3D G3DSA:1.10.150.20 421 487 8.7E-29 T 25-04-2016 SMA_RS05815 524c0f6bd532657d11f5501303ca4638 409 SUPERFAMILY SSF52540 60 390 1.83E-70 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS05815 524c0f6bd532657d11f5501303ca4638 409 Gene3D G3DSA:1.10.8.60 311 407 1.8E-38 T 25-04-2016 SMA_RS05815 524c0f6bd532657d11f5501303ca4638 409 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 7 406 2.8E-193 T 25-04-2016 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 SMA_RS05815 524c0f6bd532657d11f5501303ca4638 409 SMART SM00994 10 49 3.3E-21 T 25-04-2016 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 SMA_RS05815 524c0f6bd532657d11f5501303ca4638 409 Pfam PF07724 AAA domain (Cdc48 subfamily) 110 305 6.5E-49 T 25-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 SMA_RS05815 524c0f6bd532657d11f5501303ca4638 409 Pfam PF06689 ClpX C4-type zinc finger 12 48 1.7E-17 T 25-04-2016 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 SMA_RS05815 524c0f6bd532657d11f5501303ca4638 409 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 4 409 51.359 T 25-04-2016 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 SMA_RS05815 524c0f6bd532657d11f5501303ca4638 409 PANTHER PTHR11262:SF4 4 406 7.3E-231 T 25-04-2016 SMA_RS05815 524c0f6bd532657d11f5501303ca4638 409 SMART SM00382 110 260 1.0E-9 T 25-04-2016 IPR003593 AAA+ ATPase domain SMA_RS05815 524c0f6bd532657d11f5501303ca4638 409 SUPERFAMILY SSF57716 11 46 3.42E-11 T 25-04-2016 SMA_RS05815 524c0f6bd532657d11f5501303ca4638 409 Gene3D G3DSA:3.40.50.300 289 306 3.8E-48 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS05815 524c0f6bd532657d11f5501303ca4638 409 Gene3D G3DSA:3.40.50.300 62 252 3.8E-48 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS05815 524c0f6bd532657d11f5501303ca4638 409 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 312 390 5.5E-19 T 25-04-2016 IPR019489 Clp ATPase, C-terminal SMA_RS05815 524c0f6bd532657d11f5501303ca4638 409 SMART SM01086 312 406 8.3E-35 T 25-04-2016 IPR019489 Clp ATPase, C-terminal SMA_RS05815 524c0f6bd532657d11f5501303ca4638 409 PANTHER PTHR11262 4 406 7.3E-231 T 25-04-2016 SMA_RS05660 430f17e8d2e6fda9b1d57859cb2bad96 316 PANTHER PTHR34216:SF3 95 315 1.9E-45 T 25-04-2016 SMA_RS05660 430f17e8d2e6fda9b1d57859cb2bad96 316 Gene3D G3DSA:3.20.20.370 127 282 9.1E-29 T 25-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 SMA_RS05660 430f17e8d2e6fda9b1d57859cb2bad96 316 PANTHER PTHR34216 95 315 1.9E-45 T 25-04-2016 SMA_RS05660 430f17e8d2e6fda9b1d57859cb2bad96 316 Pfam PF01522 Polysaccharide deacetylase 157 278 2.1E-28 T 25-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 SMA_RS05660 430f17e8d2e6fda9b1d57859cb2bad96 316 SUPERFAMILY SSF88713 117 300 4.17E-38 T 25-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 SMA_RS10635 f1961813c8505f9f11e4b2c556a5fe63 352 PANTHER PTHR30349 3 244 2.4E-22 T 25-04-2016 SMA_RS10635 f1961813c8505f9f11e4b2c556a5fe63 352 PANTHER PTHR30349 262 352 2.4E-22 T 25-04-2016 SMA_RS10635 f1961813c8505f9f11e4b2c556a5fe63 352 Gene3D G3DSA:1.10.443.10 122 341 5.8E-34 T 25-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 SMA_RS10635 f1961813c8505f9f11e4b2c556a5fe63 352 SUPERFAMILY SSF56349 2 340 4.41E-46 T 25-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 SMA_RS10635 f1961813c8505f9f11e4b2c556a5fe63 352 Pfam PF00589 Phage integrase family 122 337 2.1E-21 T 25-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 SMA_RS10635 f1961813c8505f9f11e4b2c556a5fe63 352 PANTHER PTHR30349:SF20 262 352 2.4E-22 T 25-04-2016 SMA_RS10635 f1961813c8505f9f11e4b2c556a5fe63 352 PANTHER PTHR30349:SF20 3 244 2.4E-22 T 25-04-2016 SMA_RS10635 f1961813c8505f9f11e4b2c556a5fe63 352 Gene3D G3DSA:1.10.150.130 3 101 5.9E-9 T 25-04-2016 IPR023109 Integrase/recombinase, N-terminal SMA_RS04585 174716049b03c7981df037b66506f62a 500 SUPERFAMILY SSF52935 351 499 8.9E-40 T 25-04-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 SMA_RS04585 174716049b03c7981df037b66506f62a 500 PANTHER PTHR11817 1 16 2.1E-195 T 25-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 SMA_RS04585 174716049b03c7981df037b66506f62a 500 PANTHER PTHR11817 38 499 2.1E-195 T 25-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 SMA_RS04585 174716049b03c7981df037b66506f62a 500 SUPERFAMILY SSF51621 2 96 3.31E-83 T 25-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 SMA_RS04585 174716049b03c7981df037b66506f62a 500 SUPERFAMILY SSF51621 184 366 3.31E-83 T 25-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 SMA_RS04585 174716049b03c7981df037b66506f62a 500 Pfam PF00224 Pyruvate kinase, barrel domain 3 370 6.2E-148 T 25-04-2016 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 SMA_RS04585 174716049b03c7981df037b66506f62a 500 Gene3D G3DSA:3.40.1380.20 355 500 2.4E-47 T 25-04-2016 IPR015794 Pyruvate kinase, alpha/beta GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 SMA_RS04585 174716049b03c7981df037b66506f62a 500 Gene3D G3DSA:2.40.33.10 95 196 1.1E-21 T 25-04-2016 IPR015806 Pyruvate kinase, beta-barrel insert domain GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 SMA_RS04585 174716049b03c7981df037b66506f62a 500 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 37 499 3.0E-151 T 25-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 SMA_RS04585 174716049b03c7981df037b66506f62a 500 PANTHER PTHR11817:SF3 1 16 2.1E-195 T 25-04-2016 SMA_RS04585 174716049b03c7981df037b66506f62a 500 PANTHER PTHR11817:SF3 38 499 2.1E-195 T 25-04-2016 SMA_RS04585 174716049b03c7981df037b66506f62a 500 Pfam PF02887 Pyruvate kinase, alpha/beta domain 385 496 7.5E-35 T 25-04-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 SMA_RS04585 174716049b03c7981df037b66506f62a 500 Gene3D G3DSA:3.20.20.60 197 354 6.5E-98 T 25-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 SMA_RS04585 174716049b03c7981df037b66506f62a 500 Gene3D G3DSA:3.20.20.60 4 94 6.5E-98 T 25-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 SMA_RS04585 174716049b03c7981df037b66506f62a 500 PRINTS PR01050 Pyruvate kinase family signature 297 321 2.1E-67 T 25-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 SMA_RS04585 174716049b03c7981df037b66506f62a 500 PRINTS PR01050 Pyruvate kinase family signature 341 357 2.1E-67 T 25-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 SMA_RS04585 174716049b03c7981df037b66506f62a 500 PRINTS PR01050 Pyruvate kinase family signature 322 340 2.1E-67 T 25-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 SMA_RS04585 174716049b03c7981df037b66506f62a 500 PRINTS PR01050 Pyruvate kinase family signature 81 97 2.1E-67 T 25-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 SMA_RS04585 174716049b03c7981df037b66506f62a 500 PRINTS PR01050 Pyruvate kinase family signature 245 271 2.1E-67 T 25-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 SMA_RS04585 174716049b03c7981df037b66506f62a 500 PRINTS PR01050 Pyruvate kinase family signature 214 228 2.1E-67 T 25-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 SMA_RS04585 174716049b03c7981df037b66506f62a 500 PRINTS PR01050 Pyruvate kinase family signature 272 296 2.1E-67 T 25-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 SMA_RS04585 174716049b03c7981df037b66506f62a 500 SUPERFAMILY SSF50800 92 194 1.22E-17 T 25-04-2016 IPR011037 Pyruvate kinase-like, insert domain SMA_RS10255 730ff54406fcf7615d7f35d1ea9e2a42 49 Pfam PF00471 Ribosomal protein L33 3 49 2.2E-18 T 25-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS10255 730ff54406fcf7615d7f35d1ea9e2a42 49 PANTHER PTHR15238:SF3 1 49 7.0E-17 T 25-04-2016 SMA_RS10255 730ff54406fcf7615d7f35d1ea9e2a42 49 SUPERFAMILY SSF57829 1 49 2.08E-15 T 25-04-2016 IPR011332 Zinc-binding ribosomal protein GO:0006412 SMA_RS10255 730ff54406fcf7615d7f35d1ea9e2a42 49 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 3 49 1.0E-17 T 25-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS10255 730ff54406fcf7615d7f35d1ea9e2a42 49 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 1 49 15.717 T 25-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS10255 730ff54406fcf7615d7f35d1ea9e2a42 49 PANTHER PTHR15238 1 49 7.0E-17 T 25-04-2016 SMA_RS10255 730ff54406fcf7615d7f35d1ea9e2a42 49 ProSitePatterns PS00582 Ribosomal protein L33 signature. 17 36 - T 25-04-2016 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS08155 173a1f318cb187aacbb9646e423541e3 310 PANTHER PTHR30532:SF5 1 305 1.7E-68 T 25-04-2016 SMA_RS08155 173a1f318cb187aacbb9646e423541e3 310 Gene3D G3DSA:3.40.50.1980 153 305 4.0E-26 T 25-04-2016 SMA_RS08155 173a1f318cb187aacbb9646e423541e3 310 SUPERFAMILY SSF53807 46 295 2.12E-45 T 25-04-2016 SMA_RS08155 173a1f318cb187aacbb9646e423541e3 310 PANTHER PTHR30532 1 305 1.7E-68 T 25-04-2016 SMA_RS08155 173a1f318cb187aacbb9646e423541e3 310 Pfam PF01497 Periplasmic binding protein 58 284 6.1E-29 T 25-04-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 SMA_RS08155 173a1f318cb187aacbb9646e423541e3 310 Gene3D G3DSA:3.40.50.1980 46 152 2.0E-17 T 25-04-2016 SMA_RS10395 20dd15d47516c2c7d3f7049bddf1ac84 280 SUPERFAMILY SSF52540 1 238 9.04E-58 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS10395 20dd15d47516c2c7d3f7049bddf1ac84 280 TIGRFAM TIGR04521 ECF_ATPase_2: energy-coupling factor transporter ATPase 3 278 1.0E-119 T 25-04-2016 IPR030946 Energy-coupling factor transporter ATP-binding protein EcfA2 SMA_RS10395 20dd15d47516c2c7d3f7049bddf1ac84 280 PANTHER PTHR24220:SF66 4 246 6.6E-97 T 25-04-2016 SMA_RS10395 20dd15d47516c2c7d3f7049bddf1ac84 280 Pfam PF00005 ABC transporter 25 174 1.6E-29 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMA_RS10395 20dd15d47516c2c7d3f7049bddf1ac84 280 SMART SM00382 32 222 3.1E-8 T 25-04-2016 IPR003593 AAA+ ATPase domain SMA_RS10395 20dd15d47516c2c7d3f7049bddf1ac84 280 PANTHER PTHR24220 4 246 6.6E-97 T 25-04-2016 SMA_RS10395 20dd15d47516c2c7d3f7049bddf1ac84 280 Gene3D G3DSA:3.40.50.300 3 235 4.9E-65 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS10395 20dd15d47516c2c7d3f7049bddf1ac84 280 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SMA_RS02505 b6e4f627fe0fc70377c9a67de018bd98 638 Gene3D G3DSA:3.30.200.20 2 78 3.0E-26 T 25-04-2016 SMA_RS02505 b6e4f627fe0fc70377c9a67de018bd98 638 Gene3D G3DSA:1.10.510.10 79 262 1.4E-53 T 25-04-2016 SMA_RS02505 b6e4f627fe0fc70377c9a67de018bd98 638 SUPERFAMILY SSF56112 8 276 3.24E-81 T 25-04-2016 IPR011009 Protein kinase-like domain SMA_RS02505 b6e4f627fe0fc70377c9a67de018bd98 638 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 18 42 - T 25-04-2016 IPR017441 Protein kinase, ATP binding site GO:0005524 SMA_RS02505 b6e4f627fe0fc70377c9a67de018bd98 638 Pfam PF03793 PASTA domain 511 580 1.1E-10 T 25-04-2016 IPR005543 PASTA domain SMA_RS02505 b6e4f627fe0fc70377c9a67de018bd98 638 Pfam PF03793 PASTA domain 440 506 4.3E-9 T 25-04-2016 IPR005543 PASTA domain SMA_RS02505 b6e4f627fe0fc70377c9a67de018bd98 638 Pfam PF03793 PASTA domain 371 434 1.4E-16 T 25-04-2016 IPR005543 PASTA domain SMA_RS02505 b6e4f627fe0fc70377c9a67de018bd98 638 SMART SM00220 12 270 1.2E-65 T 25-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 SMA_RS02505 b6e4f627fe0fc70377c9a67de018bd98 638 PANTHER PTHR24362 573 638 2.2E-113 T 25-04-2016 SMA_RS02505 b6e4f627fe0fc70377c9a67de018bd98 638 PANTHER PTHR24362 1 315 2.2E-113 T 25-04-2016 SMA_RS02505 b6e4f627fe0fc70377c9a67de018bd98 638 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 132 144 - T 25-04-2016 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 SMA_RS02505 b6e4f627fe0fc70377c9a67de018bd98 638 PANTHER PTHR24362:SF160 573 638 2.2E-113 T 25-04-2016 SMA_RS02505 b6e4f627fe0fc70377c9a67de018bd98 638 PANTHER PTHR24362:SF160 1 315 2.2E-113 T 25-04-2016 SMA_RS02505 b6e4f627fe0fc70377c9a67de018bd98 638 Pfam PF00069 Protein kinase domain 12 241 2.2E-55 T 25-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 SMA_RS02505 b6e4f627fe0fc70377c9a67de018bd98 638 SMART SM00740 508 584 0.0091 T 25-04-2016 IPR005543 PASTA domain SMA_RS02505 b6e4f627fe0fc70377c9a67de018bd98 638 SMART SM00740 435 507 2.1E-9 T 25-04-2016 IPR005543 PASTA domain SMA_RS02505 b6e4f627fe0fc70377c9a67de018bd98 638 SMART SM00740 367 434 1.2E-18 T 25-04-2016 IPR005543 PASTA domain SMA_RS09000 ba919c063c33ba65905435c9fb4f067d 774 TIGRFAM TIGR01255 pyr_form_ly_1: formate acetyltransferase 14 762 0.0 T 25-04-2016 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493|UniPathway: UPA00920 SMA_RS09000 ba919c063c33ba65905435c9fb4f067d 774 PANTHER PTHR30191 1 762 0.0 T 25-04-2016 SMA_RS09000 ba919c063c33ba65905435c9fb4f067d 774 Pfam PF01228 Glycine radical 641 741 4.3E-22 T 25-04-2016 IPR001150 Glycine radical domain GO:0003824|GO:0008152 SMA_RS09000 ba919c063c33ba65905435c9fb4f067d 774 ProSitePatterns PS00850 Glycine radical domain signature. 732 740 - T 25-04-2016 IPR019777 Formate C-acetyltransferase glycine radical, conserved site SMA_RS09000 ba919c063c33ba65905435c9fb4f067d 774 Gene3D G3DSA:3.20.70.20 9 760 6.0E-230 T 25-04-2016 SMA_RS09000 ba919c063c33ba65905435c9fb4f067d 774 SUPERFAMILY SSF51998 9 761 5.04E-203 T 25-04-2016 SMA_RS09000 ba919c063c33ba65905435c9fb4f067d 774 PIRSF PIRSF000379 11 762 2.2E-288 T 25-04-2016 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493|UniPathway: UPA00920 SMA_RS09000 ba919c063c33ba65905435c9fb4f067d 774 Pfam PF02901 Pyruvate formate lyase-like 30 612 2.0E-149 T 25-04-2016 IPR004184 Pyruvate formate lyase domain GO:0003824 SMA_RS09000 ba919c063c33ba65905435c9fb4f067d 774 PANTHER PTHR30191:SF0 1 762 0.0 T 25-04-2016 SMA_RS07470 d85c255ab2ac710a7ef4dbe90eeaa2a5 209 Gene3D G3DSA:3.40.50.1240 1 206 1.0E-52 T 25-04-2016 IPR029033 Histidine phosphatase superfamily SMA_RS07470 d85c255ab2ac710a7ef4dbe90eeaa2a5 209 SMART SM00855 2 164 4.2E-13 T 25-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 SMA_RS07470 d85c255ab2ac710a7ef4dbe90eeaa2a5 209 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 202 4.3E-46 T 25-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 SMA_RS07470 d85c255ab2ac710a7ef4dbe90eeaa2a5 209 SUPERFAMILY SSF53254 1 206 6.28E-50 T 25-04-2016 IPR029033 Histidine phosphatase superfamily SMA_RS07470 d85c255ab2ac710a7ef4dbe90eeaa2a5 209 PANTHER PTHR23029 1 204 4.1E-40 T 25-04-2016 SMA_RS03485 eb646c83fe97096d2377cafe1e07f162 126 PANTHER PTHR11803 1 125 2.5E-55 T 25-04-2016 IPR006175 YjgF/YER057c/UK114 family SMA_RS03485 eb646c83fe97096d2377cafe1e07f162 126 Gene3D G3DSA:3.30.1330.40 3 125 3.3E-48 T 25-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like SMA_RS03485 eb646c83fe97096d2377cafe1e07f162 126 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 101 119 - T 25-04-2016 IPR019897 RidA, conserved site SMA_RS03485 eb646c83fe97096d2377cafe1e07f162 126 Pfam PF01042 Endoribonuclease L-PSP 8 124 3.0E-43 T 25-04-2016 IPR006175 YjgF/YER057c/UK114 family SMA_RS03485 eb646c83fe97096d2377cafe1e07f162 126 SUPERFAMILY SSF55298 2 126 9.58E-46 T 25-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like SMA_RS03485 eb646c83fe97096d2377cafe1e07f162 126 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 3 124 4.0E-52 T 25-04-2016 IPR006056 RidA family SMA_RS05165 9c27c8142f40cd6a5acedbf6053847f6 358 SUPERFAMILY SSF55347 127 329 3.74E-69 T 25-04-2016 SMA_RS05165 9c27c8142f40cd6a5acedbf6053847f6 358 SMART SM00859 4 119 4.7E-42 T 25-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 SMA_RS05165 9c27c8142f40cd6a5acedbf6053847f6 358 PANTHER PTHR10174:SF2 46 344 3.6E-69 T 25-04-2016 SMA_RS05165 9c27c8142f40cd6a5acedbf6053847f6 358 PIRSF PIRSF000148 2 347 2.9E-124 T 25-04-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 SMA_RS05165 9c27c8142f40cd6a5acedbf6053847f6 358 TIGRFAM TIGR01296 asd_B: aspartate-semialdehyde dehydrogenase 5 342 1.4E-133 T 25-04-2016 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 SMA_RS05165 9c27c8142f40cd6a5acedbf6053847f6 358 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 239 253 - T 25-04-2016 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 SMA_RS05165 9c27c8142f40cd6a5acedbf6053847f6 358 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 2 342 37.024 T 25-04-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 SMA_RS05165 9c27c8142f40cd6a5acedbf6053847f6 358 Gene3D G3DSA:3.40.50.720 2 140 1.6E-59 T 25-04-2016 IPR016040 NAD(P)-binding domain SMA_RS05165 9c27c8142f40cd6a5acedbf6053847f6 358 Gene3D G3DSA:3.30.360.10 141 325 1.4E-74 T 25-04-2016 SMA_RS05165 9c27c8142f40cd6a5acedbf6053847f6 358 PANTHER PTHR10174 46 344 3.6E-69 T 25-04-2016 SMA_RS05165 9c27c8142f40cd6a5acedbf6053847f6 358 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 5 118 5.9E-31 T 25-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 SMA_RS05165 9c27c8142f40cd6a5acedbf6053847f6 358 SUPERFAMILY SSF51735 3 155 1.65E-49 T 25-04-2016 IPR016040 NAD(P)-binding domain SMA_RS05165 9c27c8142f40cd6a5acedbf6053847f6 358 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 137 328 2.2E-55 T 25-04-2016 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 SMA_RS07805 3b5000ad71d6ba94115c42742a97c48b 273 SUPERFAMILY SSF57716 220 272 5.7E-18 T 25-04-2016 SMA_RS07805 3b5000ad71d6ba94115c42742a97c48b 273 Pfam PF06827 Zinc finger found in FPG and IleRS 244 272 1.3E-12 T 25-04-2016 IPR010663 Zinc finger, FPG/IleRS-type SMA_RS07805 3b5000ad71d6ba94115c42742a97c48b 273 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 272 43.237 T 25-04-2016 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 SMA_RS07805 3b5000ad71d6ba94115c42742a97c48b 273 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 132 222 1.8E-30 T 25-04-2016 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 SMA_RS07805 3b5000ad71d6ba94115c42742a97c48b 273 Gene3D G3DSA:1.10.8.50 132 272 3.1E-48 T 25-04-2016 SMA_RS07805 3b5000ad71d6ba94115c42742a97c48b 273 PANTHER PTHR22993 1 273 3.3E-115 T 25-04-2016 SMA_RS07805 3b5000ad71d6ba94115c42742a97c48b 273 PANTHER PTHR22993:SF15 1 273 3.3E-115 T 25-04-2016 SMA_RS07805 3b5000ad71d6ba94115c42742a97c48b 273 SMART SM00898 2 116 8.2E-46 T 25-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 SMA_RS07805 3b5000ad71d6ba94115c42742a97c48b 273 SUPERFAMILY SSF81624 2 136 7.72E-40 T 25-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 SMA_RS07805 3b5000ad71d6ba94115c42742a97c48b 273 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 271 4.6E-107 T 25-04-2016 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 SMA_RS07805 3b5000ad71d6ba94115c42742a97c48b 273 SMART SM01232 132 224 3.4E-40 T 25-04-2016 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 SMA_RS07805 3b5000ad71d6ba94115c42742a97c48b 273 Gene3D G3DSA:3.20.190.10 2 127 9.5E-38 T 25-04-2016 SMA_RS07805 3b5000ad71d6ba94115c42742a97c48b 273 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 115 3.6E-33 T 25-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 SMA_RS07805 3b5000ad71d6ba94115c42742a97c48b 273 ProSitePatterns PS01242 Zinc finger FPG-type signature. 247 271 - T 25-04-2016 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 SMA_RS07805 3b5000ad71d6ba94115c42742a97c48b 273 SUPERFAMILY SSF46946 131 221 4.42E-28 T 25-04-2016 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 SMA_RS10405 3e0cefcdc5fae073d6f0a38cd4b9968a 184 PANTHER PTHR14269 10 172 1.0E-44 T 25-04-2016 SMA_RS10405 3e0cefcdc5fae073d6f0a38cd4b9968a 184 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 56 78 - T 25-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 SMA_RS10405 3e0cefcdc5fae073d6f0a38cd4b9968a 184 Pfam PF01066 CDP-alcohol phosphatidyltransferase 10 78 1.4E-17 T 25-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 SMA_RS10405 3e0cefcdc5fae073d6f0a38cd4b9968a 184 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 10 173 1.3E-51 T 25-04-2016 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 SMA_RS10405 3e0cefcdc5fae073d6f0a38cd4b9968a 184 PIRSF PIRSF000847 6 184 7.9E-49 T 25-04-2016 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 SMA_RS01130 bbc83e3535687163d3702fbe9f3e3122 277 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 91 272 7.6E-17 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SMA_RS01130 bbc83e3535687163d3702fbe9f3e3122 277 SUPERFAMILY SSF161098 10 273 1.31E-59 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SMA_RS01130 bbc83e3535687163d3702fbe9f3e3122 277 Gene3D G3DSA:1.10.3720.10 7 266 4.7E-52 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SMA_RS01130 bbc83e3535687163d3702fbe9f3e3122 277 PANTHER PTHR32243:SF38 2 277 8.8E-80 T 25-04-2016 SMA_RS01130 bbc83e3535687163d3702fbe9f3e3122 277 PANTHER PTHR32243 2 277 8.8E-80 T 25-04-2016 SMA_RS06130 8ae8132def699c303bca49042c9ff517 336 SUPERFAMILY SSF51905 4 305 6.57E-44 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMA_RS06130 8ae8132def699c303bca49042c9ff517 336 PANTHER PTHR22912 1 321 7.8E-121 T 25-04-2016 SMA_RS06130 8ae8132def699c303bca49042c9ff517 336 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 114 122 3.5E-24 T 25-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SMA_RS06130 8ae8132def699c303bca49042c9ff517 336 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 277 295 3.5E-24 T 25-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SMA_RS06130 8ae8132def699c303bca49042c9ff517 336 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 204 220 3.5E-24 T 25-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SMA_RS06130 8ae8132def699c303bca49042c9ff517 336 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 9 31 3.5E-24 T 25-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SMA_RS06130 8ae8132def699c303bca49042c9ff517 336 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 153 177 3.5E-24 T 25-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SMA_RS06130 8ae8132def699c303bca49042c9ff517 336 PANTHER PTHR22912:SF158 1 321 7.8E-121 T 25-04-2016 SMA_RS06130 8ae8132def699c303bca49042c9ff517 336 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 157 175 7.8E-20 T 25-04-2016 SMA_RS06130 8ae8132def699c303bca49042c9ff517 336 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 241 257 7.8E-20 T 25-04-2016 SMA_RS06130 8ae8132def699c303bca49042c9ff517 336 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 267 289 7.8E-20 T 25-04-2016 SMA_RS06130 8ae8132def699c303bca49042c9ff517 336 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 10 29 7.8E-20 T 25-04-2016 SMA_RS06130 8ae8132def699c303bca49042c9ff517 336 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 113 131 7.8E-20 T 25-04-2016 SMA_RS06130 8ae8132def699c303bca49042c9ff517 336 Gene3D G3DSA:3.50.50.60 6 127 4.9E-28 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMA_RS06130 8ae8132def699c303bca49042c9ff517 336 Hamap MF_01685 Ferredoxin--NADP reductase. 7 330 40.963 T 25-04-2016 IPR022890 Ferredoxin--NADP reductase, type 2 GO:0004324|GO:0055114 KEGG: 00195+1.18.1.2|MetaCyc: PWY-101|MetaCyc: PWY-7230 SMA_RS06130 8ae8132def699c303bca49042c9ff517 336 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 296 1.9E-35 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMA_RS06130 8ae8132def699c303bca49042c9ff517 336 Gene3D G3DSA:3.50.50.60 128 312 1.4E-28 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMA_RS06020 3a2258c392cf16d9ec0593ef4f4e4d7f 136 PIRSF PIRSF004749 2 136 6.2E-30 T 25-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 SMA_RS06020 3a2258c392cf16d9ec0593ef4f4e4d7f 136 SUPERFAMILY SSF56420 12 136 1.44E-33 T 25-04-2016 IPR023635 Peptide deformylase SMA_RS06020 3a2258c392cf16d9ec0593ef4f4e4d7f 136 Pfam PF01327 Polypeptide deformylase 12 136 3.1E-24 T 25-04-2016 IPR023635 Peptide deformylase SMA_RS06020 3a2258c392cf16d9ec0593ef4f4e4d7f 136 PANTHER PTHR10458 26 136 5.8E-22 T 25-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 SMA_RS06020 3a2258c392cf16d9ec0593ef4f4e4d7f 136 PRINTS PR01576 Peptide deformylase signature 30 59 1.7E-11 T 25-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 SMA_RS06020 3a2258c392cf16d9ec0593ef4f4e4d7f 136 PRINTS PR01576 Peptide deformylase signature 83 94 1.7E-11 T 25-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 SMA_RS06020 3a2258c392cf16d9ec0593ef4f4e4d7f 136 PRINTS PR01576 Peptide deformylase signature 113 136 1.7E-11 T 25-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 SMA_RS06020 3a2258c392cf16d9ec0593ef4f4e4d7f 136 Gene3D G3DSA:3.90.45.10 2 135 1.4E-33 T 25-04-2016 IPR023635 Peptide deformylase SMA_RS08060 492d22ef9e6ecfd8814e8e29ec8f99aa 291 Pfam PF13177 DNA polymerase III, delta subunit 7 162 6.5E-55 T 25-04-2016 SMA_RS08060 492d22ef9e6ecfd8814e8e29ec8f99aa 291 Gene3D G3DSA:3.40.50.300 7 161 2.9E-44 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS08060 492d22ef9e6ecfd8814e8e29ec8f99aa 291 PANTHER PTHR11669:SF8 7 170 2.0E-41 T 25-04-2016 SMA_RS08060 492d22ef9e6ecfd8814e8e29ec8f99aa 291 SUPERFAMILY SSF52540 6 172 1.06E-31 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS08060 492d22ef9e6ecfd8814e8e29ec8f99aa 291 PANTHER PTHR11669 7 170 2.0E-41 T 25-04-2016 SMA_RS01655 5a1906027e206ae609360f270d17069f 534 TIGRFAM TIGR00337 PyrG: CTP synthase 1 528 7.9E-251 T 25-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 SMA_RS01655 5a1906027e206ae609360f270d17069f 534 Gene3D G3DSA:3.40.50.880 288 533 6.7E-98 T 25-04-2016 IPR029062 Class I glutamine amidotransferase-like SMA_RS01655 5a1906027e206ae609360f270d17069f 534 Hamap MF_01227 CTP synthase [pyrG]. 2 533 51.564 T 25-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 SMA_RS01655 5a1906027e206ae609360f270d17069f 534 Pfam PF06418 CTP synthase N-terminus 3 267 7.5E-129 T 25-04-2016 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 SMA_RS01655 5a1906027e206ae609360f270d17069f 534 PANTHER PTHR11550 1 531 0.0 T 25-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 SMA_RS01655 5a1906027e206ae609360f270d17069f 534 Pfam PF00117 Glutamine amidotransferase class-I 302 527 6.9E-56 T 25-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 SMA_RS01655 5a1906027e206ae609360f270d17069f 534 SUPERFAMILY SSF52317 289 532 3.4E-76 T 25-04-2016 IPR029062 Class I glutamine amidotransferase-like SMA_RS01655 5a1906027e206ae609360f270d17069f 534 Gene3D G3DSA:3.40.50.300 1 284 1.7E-140 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS01655 5a1906027e206ae609360f270d17069f 534 SUPERFAMILY SSF52540 1 271 3.03E-125 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS04230 a79c9b6bafa38e4f0fe664de79d213bc 223 Gene3D G3DSA:1.10.10.10 148 214 1.9E-9 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMA_RS04230 a79c9b6bafa38e4f0fe664de79d213bc 223 PANTHER PTHR24567 6 221 8.6E-17 T 25-04-2016 SMA_RS04230 a79c9b6bafa38e4f0fe664de79d213bc 223 SMART SM00419 157 207 0.0084 T 25-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 SMA_RS04230 a79c9b6bafa38e4f0fe664de79d213bc 223 SUPERFAMILY SSF46785 149 212 1.09E-9 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMA_RS04230 a79c9b6bafa38e4f0fe664de79d213bc 223 SUPERFAMILY SSF51206 7 133 6.15E-15 T 25-04-2016 IPR018490 Cyclic nucleotide-binding-like SMA_RS04230 a79c9b6bafa38e4f0fe664de79d213bc 223 Pfam PF13545 Crp-like helix-turn-helix domain 147 210 1.4E-10 T 25-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 SMA_RS04230 a79c9b6bafa38e4f0fe664de79d213bc 223 Pfam PF00027 Cyclic nucleotide-binding domain 18 109 8.2E-8 T 25-04-2016 IPR000595 Cyclic nucleotide-binding domain SMA_RS04230 a79c9b6bafa38e4f0fe664de79d213bc 223 Gene3D G3DSA:2.60.120.10 7 131 5.4E-13 T 25-04-2016 IPR014710 RmlC-like jelly roll fold SMA_RS09380 8493c63838a0a46bfe31e08dde4ad8da 1670 Pfam PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) 853 925 1.3E-7 T 25-04-2016 IPR013378 Listeria/Bacterioides repeat SMA_RS09380 8493c63838a0a46bfe31e08dde4ad8da 1670 Pfam PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) 723 753 0.27 T 25-04-2016 IPR013378 Listeria/Bacterioides repeat SMA_RS09380 8493c63838a0a46bfe31e08dde4ad8da 1670 Pfam PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) 270 333 9.1E-9 T 25-04-2016 IPR013378 Listeria/Bacterioides repeat SMA_RS09380 8493c63838a0a46bfe31e08dde4ad8da 1670 Pfam PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) 505 571 1.1E-13 T 25-04-2016 IPR013378 Listeria/Bacterioides repeat SMA_RS09380 8493c63838a0a46bfe31e08dde4ad8da 1670 Pfam PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) 931 997 2.6E-16 T 25-04-2016 IPR013378 Listeria/Bacterioides repeat SMA_RS09380 8493c63838a0a46bfe31e08dde4ad8da 1670 TIGRFAM TIGR02543 List_Bact_rpt: repeat, TIGR02543 family 894 926 3.9E-6 T 25-04-2016 IPR013378 Listeria/Bacterioides repeat SMA_RS09380 8493c63838a0a46bfe31e08dde4ad8da 1670 TIGRFAM TIGR02543 List_Bact_rpt: repeat, TIGR02543 family 535 577 1.1E-7 T 25-04-2016 IPR013378 Listeria/Bacterioides repeat SMA_RS07540 d3a2ec2fc6e3624e66f9724517e0afb6 157 Pfam PF12732 YtxH-like protein 6 83 3.5E-14 T 25-04-2016 IPR024623 Uncharacterised protein family YtxH SMA_RS08125 4faea05b158f2a5badf545c62696902a 209 Pfam PF14681 Uracil phosphoribosyltransferase 6 208 2.3E-78 T 25-04-2016 IPR029057 Phosphoribosyltransferase-like SMA_RS08125 4faea05b158f2a5badf545c62696902a 209 Gene3D G3DSA:3.40.50.2020 5 209 4.1E-87 T 25-04-2016 IPR029057 Phosphoribosyltransferase-like SMA_RS08125 4faea05b158f2a5badf545c62696902a 209 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 4 209 1.2E-91 T 25-04-2016 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183|UniPathway: UPA00574 SMA_RS08125 4faea05b158f2a5badf545c62696902a 209 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 3 209 48.66 T 25-04-2016 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183|UniPathway: UPA00574 SMA_RS08125 4faea05b158f2a5badf545c62696902a 209 PANTHER PTHR10285 5 198 3.9E-105 T 25-04-2016 SMA_RS08125 4faea05b158f2a5badf545c62696902a 209 SUPERFAMILY SSF53271 5 207 1.3E-73 T 25-04-2016 IPR029057 Phosphoribosyltransferase-like SMA_RS04495 05d9d7084e71bcf0f731fafc7758b103 423 Pfam PF01979 Amidohydrolase family 50 419 1.1E-31 T 25-04-2016 IPR006680 Amidohydrolase-related GO:0016787 SMA_RS04495 05d9d7084e71bcf0f731fafc7758b103 423 Hamap MF_00220_B Dihydroorotase [pyrC]. 1 423 38.245 T 25-04-2016 IPR004722 Dihydroorotase GO:0004151|GO:0006221|GO:0046872 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 SMA_RS04495 05d9d7084e71bcf0f731fafc7758b103 423 TIGRFAM TIGR00857 pyrC_multi: dihydroorotase, multifunctional complex type 20 422 7.3E-104 T 25-04-2016 IPR004722 Dihydroorotase GO:0004151|GO:0006221|GO:0046872 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 SMA_RS04495 05d9d7084e71bcf0f731fafc7758b103 423 Gene3D G3DSA:2.30.40.10 1 68 1.2E-23 T 25-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SMA_RS04495 05d9d7084e71bcf0f731fafc7758b103 423 ProSitePatterns PS00483 Dihydroorotase signature 2. 301 312 - T 25-04-2016 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 SMA_RS04495 05d9d7084e71bcf0f731fafc7758b103 423 SUPERFAMILY SSF51556 54 364 1.77E-88 T 25-04-2016 IPR032466 Metal-dependent hydrolase SMA_RS04495 05d9d7084e71bcf0f731fafc7758b103 423 ProSitePatterns PS00482 Dihydroorotase signature 1. 57 65 - T 25-04-2016 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 SMA_RS04495 05d9d7084e71bcf0f731fafc7758b103 423 Gene3D G3DSA:3.20.20.140 69 420 8.8E-90 T 25-04-2016 SMA_RS04495 05d9d7084e71bcf0f731fafc7758b103 423 SUPERFAMILY SSF51338 2 53 9.77E-25 T 25-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SMA_RS04495 05d9d7084e71bcf0f731fafc7758b103 423 SUPERFAMILY SSF51338 366 421 9.77E-25 T 25-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SMA_RS04495 05d9d7084e71bcf0f731fafc7758b103 423 PANTHER PTHR11647:SF70 1 421 1.6E-161 T 25-04-2016 SMA_RS04495 05d9d7084e71bcf0f731fafc7758b103 423 PANTHER PTHR11647 1 421 1.6E-161 T 25-04-2016 SMA_RS02940 5a4de582cee7028105a4f21b69944571 400 PANTHER PTHR10314:SF3 10 398 5.9E-234 T 25-04-2016 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 SMA_RS02940 5a4de582cee7028105a4f21b69944571 400 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 10 394 2.0E-192 T 25-04-2016 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 SMA_RS02940 5a4de582cee7028105a4f21b69944571 400 Gene3D G3DSA:3.40.50.1100 101 180 1.6E-19 T 25-04-2016 SMA_RS02940 5a4de582cee7028105a4f21b69944571 400 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 5 395 52.46 T 25-04-2016 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 SMA_RS02940 5a4de582cee7028105a4f21b69944571 400 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 84 98 - T 25-04-2016 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 SMA_RS02940 5a4de582cee7028105a4f21b69944571 400 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 56 382 1.7E-46 T 25-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme SMA_RS02940 5a4de582cee7028105a4f21b69944571 400 Gene3D G3DSA:3.40.50.1100 181 396 1.5E-89 T 25-04-2016 SMA_RS02940 5a4de582cee7028105a4f21b69944571 400 PANTHER PTHR10314 10 398 5.9E-234 T 25-04-2016 SMA_RS02940 5a4de582cee7028105a4f21b69944571 400 SUPERFAMILY SSF53686 6 392 7.6E-146 T 25-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme SMA_RS02940 5a4de582cee7028105a4f21b69944571 400 PIRSF PIRSF001413 1 400 1.1E-168 T 25-04-2016 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 SMA_RS03455 9f84bfd39e41e6bc8b6e51e849ef7d19 372 PANTHER PTHR11739 6 372 5.4E-151 T 25-04-2016 IPR002020 Citrate synthase GO:0046912 SMA_RS03455 9f84bfd39e41e6bc8b6e51e849ef7d19 372 Pfam PF00285 Citrate synthase, C-terminal domain 6 355 2.3E-128 T 25-04-2016 IPR002020 Citrate synthase GO:0046912 SMA_RS03455 9f84bfd39e41e6bc8b6e51e849ef7d19 372 Gene3D G3DSA:1.10.580.10 12 234 2.4E-83 T 25-04-2016 IPR016142 Citrate synthase-like, large alpha subdomain UniPathway: UPA00223 SMA_RS03455 9f84bfd39e41e6bc8b6e51e849ef7d19 372 PRINTS PR00143 Citrate synthase signature 124 137 2.4E-46 T 25-04-2016 IPR002020 Citrate synthase GO:0046912 SMA_RS03455 9f84bfd39e41e6bc8b6e51e849ef7d19 372 PRINTS PR00143 Citrate synthase signature 248 268 2.4E-46 T 25-04-2016 IPR002020 Citrate synthase GO:0046912 SMA_RS03455 9f84bfd39e41e6bc8b6e51e849ef7d19 372 PRINTS PR00143 Citrate synthase signature 173 188 2.4E-46 T 25-04-2016 IPR002020 Citrate synthase GO:0046912 SMA_RS03455 9f84bfd39e41e6bc8b6e51e849ef7d19 372 PRINTS PR00143 Citrate synthase signature 325 339 2.4E-46 T 25-04-2016 IPR002020 Citrate synthase GO:0046912 SMA_RS03455 9f84bfd39e41e6bc8b6e51e849ef7d19 372 PRINTS PR00143 Citrate synthase signature 305 321 2.4E-46 T 25-04-2016 IPR002020 Citrate synthase GO:0046912 SMA_RS03455 9f84bfd39e41e6bc8b6e51e849ef7d19 372 PRINTS PR00143 Citrate synthase signature 195 223 2.4E-46 T 25-04-2016 IPR002020 Citrate synthase GO:0046912 SMA_RS03455 9f84bfd39e41e6bc8b6e51e849ef7d19 372 ProSitePatterns PS00480 Citrate synthase signature. 255 267 - T 25-04-2016 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 UniPathway: UPA00223 SMA_RS03455 9f84bfd39e41e6bc8b6e51e849ef7d19 372 PANTHER PTHR11739:SF4 6 372 5.4E-151 T 25-04-2016 SMA_RS03455 9f84bfd39e41e6bc8b6e51e849ef7d19 372 SUPERFAMILY SSF48256 5 372 4.71E-127 T 25-04-2016 IPR002020 Citrate synthase GO:0046912 SMA_RS03455 9f84bfd39e41e6bc8b6e51e849ef7d19 372 TIGRFAM TIGR01800 cit_synth_II: 2-methylcitrate synthase/citrate synthase II 6 372 9.0E-145 T 25-04-2016 IPR011278 2-methylcitrate synthase/citrate synthase type I GO:0005737|GO:0046912 SMA_RS03455 9f84bfd39e41e6bc8b6e51e849ef7d19 372 Gene3D G3DSA:1.10.230.10 235 319 4.9E-33 T 25-04-2016 IPR016143 Citrate synthase-like, small alpha subdomain SMA_RS03455 9f84bfd39e41e6bc8b6e51e849ef7d19 372 PIRSF PIRSF001369 1 372 2.6E-154 T 25-04-2016 IPR024176 Citrate synthase, bacterial-type UniPathway: UPA00223 SMA_RS08710 9272842c093af0578274df3ff0eef95e 150 PANTHER PTHR31964 1 148 2.2E-36 T 25-04-2016 SMA_RS08710 9272842c093af0578274df3ff0eef95e 150 Gene3D G3DSA:3.40.50.620 5 144 1.5E-40 T 25-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SMA_RS08710 9272842c093af0578274df3ff0eef95e 150 SUPERFAMILY SSF52402 5 146 2.43E-32 T 25-04-2016 SMA_RS08710 9272842c093af0578274df3ff0eef95e 150 PRINTS PR01438 Universal stress protein signature 104 116 4.6E-18 T 25-04-2016 IPR006015 Universal stress protein A SMA_RS08710 9272842c093af0578274df3ff0eef95e 150 PRINTS PR01438 Universal stress protein signature 5 23 4.6E-18 T 25-04-2016 IPR006015 Universal stress protein A SMA_RS08710 9272842c093af0578274df3ff0eef95e 150 PRINTS PR01438 Universal stress protein signature 122 144 4.6E-18 T 25-04-2016 IPR006015 Universal stress protein A SMA_RS08710 9272842c093af0578274df3ff0eef95e 150 PANTHER PTHR31964:SF45 1 148 2.2E-36 T 25-04-2016 SMA_RS08710 9272842c093af0578274df3ff0eef95e 150 PIRSF PIRSF006276 1 147 8.0E-20 T 25-04-2016 IPR006015 Universal stress protein A SMA_RS08710 9272842c093af0578274df3ff0eef95e 150 Pfam PF00582 Universal stress protein family 4 144 3.1E-33 T 25-04-2016 IPR006016 UspA GO:0006950 SMA_RS02895 1fd733f973699ea65f54fc68f0c0cbc5 198 ProSitePatterns PS00622 LuxR-type HTH domain signature. 152 179 - T 25-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SMA_RS02895 1fd733f973699ea65f54fc68f0c0cbc5 198 Pfam PF00196 Bacterial regulatory proteins, luxR family 137 191 6.1E-18 T 25-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SMA_RS02895 1fd733f973699ea65f54fc68f0c0cbc5 198 PANTHER PTHR26402 1 198 4.1E-97 T 25-04-2016 SMA_RS02895 1fd733f973699ea65f54fc68f0c0cbc5 198 Gene3D G3DSA:3.40.50.2300 1 140 2.5E-30 T 25-04-2016 SMA_RS02895 1fd733f973699ea65f54fc68f0c0cbc5 198 Pfam PF00072 Response regulator receiver domain 4 113 1.0E-22 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMA_RS02895 1fd733f973699ea65f54fc68f0c0cbc5 198 Gene3D G3DSA:1.10.10.10 141 198 1.0E-22 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMA_RS02895 1fd733f973699ea65f54fc68f0c0cbc5 198 SMART SM00421 135 192 1.2E-20 T 25-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SMA_RS02895 1fd733f973699ea65f54fc68f0c0cbc5 198 SUPERFAMILY SSF52172 1 130 1.28E-29 T 25-04-2016 IPR011006 CheY-like superfamily SMA_RS02895 1fd733f973699ea65f54fc68f0c0cbc5 198 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 168 180 1.7E-11 T 25-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SMA_RS02895 1fd733f973699ea65f54fc68f0c0cbc5 198 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 138 152 1.7E-11 T 25-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SMA_RS02895 1fd733f973699ea65f54fc68f0c0cbc5 198 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 152 168 1.7E-11 T 25-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SMA_RS02895 1fd733f973699ea65f54fc68f0c0cbc5 198 SUPERFAMILY SSF46894 127 198 5.44E-19 T 25-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SMA_RS02895 1fd733f973699ea65f54fc68f0c0cbc5 198 SMART SM00448 1 113 1.6E-27 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMA_RS02895 1fd733f973699ea65f54fc68f0c0cbc5 198 PANTHER PTHR26402:SF580 1 198 4.1E-97 T 25-04-2016 SMA_RS06595 559ae70b63dcc2054554389825ab5f99 246 PANTHER PTHR24220 7 245 8.9E-139 T 25-04-2016 SMA_RS06595 559ae70b63dcc2054554389825ab5f99 246 Pfam PF00005 ABC transporter 21 169 3.7E-37 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMA_RS06595 559ae70b63dcc2054554389825ab5f99 246 Gene3D G3DSA:3.40.50.300 6 241 3.1E-86 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS06595 559ae70b63dcc2054554389825ab5f99 246 PANTHER PTHR24220:SF327 7 245 8.9E-139 T 25-04-2016 SMA_RS06595 559ae70b63dcc2054554389825ab5f99 246 SUPERFAMILY SSF52540 6 239 5.2E-80 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS06595 559ae70b63dcc2054554389825ab5f99 246 SMART SM00382 30 216 1.2E-14 T 25-04-2016 IPR003593 AAA+ ATPase domain SMA_RS06595 559ae70b63dcc2054554389825ab5f99 246 PIRSF PIRSF039085 2 245 7.2E-115 T 25-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 SMA_RS06595 559ae70b63dcc2054554389825ab5f99 246 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SMA_RS06085 457eae858d546ec41cc499b0e6a0fbb2 282 Pfam PF02645 Uncharacterised protein, DegV family COG1307 2 279 5.0E-85 T 25-04-2016 IPR003797 DegV SMA_RS06085 457eae858d546ec41cc499b0e6a0fbb2 282 SUPERFAMILY SSF82549 1 279 3.14E-82 T 25-04-2016 SMA_RS06085 457eae858d546ec41cc499b0e6a0fbb2 282 Gene3D G3DSA:3.30.1180.10 155 278 6.2E-41 T 25-04-2016 SMA_RS06085 457eae858d546ec41cc499b0e6a0fbb2 282 PANTHER PTHR33434:SF2 1 280 5.3E-68 T 25-04-2016 SMA_RS06085 457eae858d546ec41cc499b0e6a0fbb2 282 Gene3D G3DSA:3.40.50.10170 1 150 9.9E-38 T 25-04-2016 SMA_RS06085 457eae858d546ec41cc499b0e6a0fbb2 282 PANTHER PTHR33434 1 280 5.3E-68 T 25-04-2016 SMA_RS06085 457eae858d546ec41cc499b0e6a0fbb2 282 TIGRFAM TIGR00762 DegV: EDD domain protein, DegV family 4 278 8.5E-87 T 25-04-2016 IPR003797 DegV SMA_RS04980 5657dba8388e7dc90e0b0cc601c06013 531 Pfam PF12161 HsdM N-terminal domain 9 157 1.1E-18 T 25-04-2016 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain SMA_RS04980 5657dba8388e7dc90e0b0cc601c06013 531 Gene3D G3DSA:3.40.50.150 195 430 1.8E-37 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMA_RS04980 5657dba8388e7dc90e0b0cc601c06013 531 PANTHER PTHR30408:SF4 153 498 2.9E-128 T 25-04-2016 SMA_RS04980 5657dba8388e7dc90e0b0cc601c06013 531 SUPERFAMILY SSF53335 6 44 4.95E-124 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMA_RS04980 5657dba8388e7dc90e0b0cc601c06013 531 SUPERFAMILY SSF53335 86 512 4.95E-124 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMA_RS04980 5657dba8388e7dc90e0b0cc601c06013 531 TIGRFAM TIGR00497 hsdM: type I restriction-modification system, M subunit 7 492 1.0E-107 T 25-04-2016 IPR004546 Restriction endonuclease, type I, HsdM GO:0003677|GO:0009007|GO:0009307 SMA_RS04980 5657dba8388e7dc90e0b0cc601c06013 531 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 331 355 9.3E-19 T 25-04-2016 SMA_RS04980 5657dba8388e7dc90e0b0cc601c06013 531 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 221 235 9.3E-19 T 25-04-2016 SMA_RS04980 5657dba8388e7dc90e0b0cc601c06013 531 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 294 306 9.3E-19 T 25-04-2016 SMA_RS04980 5657dba8388e7dc90e0b0cc601c06013 531 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 193 209 9.3E-19 T 25-04-2016 SMA_RS04980 5657dba8388e7dc90e0b0cc601c06013 531 PANTHER PTHR30408 153 498 2.9E-128 T 25-04-2016 SMA_RS04980 5657dba8388e7dc90e0b0cc601c06013 531 Pfam PF02384 N-6 DNA Methylase 170 477 1.8E-99 T 25-04-2016 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 SMA_RS09075 5e0deb605d8e97fa8c8b0f5001978a2d 99 PANTHER PTHR33449:SF1 1 99 3.6E-32 T 25-04-2016 SMA_RS09075 5e0deb605d8e97fa8c8b0f5001978a2d 99 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 2 96 19.891 T 25-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family SMA_RS09075 5e0deb605d8e97fa8c8b0f5001978a2d 99 Pfam PF02575 YbaB/EbfC DNA-binding family 8 97 9.3E-28 T 25-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family SMA_RS09075 5e0deb605d8e97fa8c8b0f5001978a2d 99 Gene3D G3DSA:3.30.1310.10 1 97 3.4E-29 T 25-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family SMA_RS09075 5e0deb605d8e97fa8c8b0f5001978a2d 99 SUPERFAMILY SSF82607 4 94 4.19E-27 T 25-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family SMA_RS09075 5e0deb605d8e97fa8c8b0f5001978a2d 99 PANTHER PTHR33449 1 99 3.6E-32 T 25-04-2016 SMA_RS09075 5e0deb605d8e97fa8c8b0f5001978a2d 99 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 3 89 1.6E-23 T 25-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family SMA_RS09075 5e0deb605d8e97fa8c8b0f5001978a2d 99 PIRSF PIRSF004555 1 99 1.3E-28 T 25-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family SMA_RS05835 acba27459c06049ef665872050992bae 392 Gene3D G3DSA:3.40.47.10 1 250 6.4E-83 T 25-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SMA_RS05835 acba27459c06049ef665872050992bae 392 TIGRFAM TIGR01835 HMG-CoA-S_prok: hydroxymethylglutaryl-CoA synthase 3 385 3.0E-159 T 25-04-2016 IPR011554 Hydroxymethylglutaryl-CoA synthase, prokaryotic KEGG: 00072+2.3.3.10|KEGG: 00280+2.3.3.10|KEGG: 00650+2.3.3.10|KEGG: 00900+2.3.3.10|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7571|MetaCyc: PWY-922|UniPathway: UPA00058 SMA_RS05835 acba27459c06049ef665872050992bae 392 PANTHER PTHR11877:SF26 3 392 4.5E-91 T 25-04-2016 SMA_RS05835 acba27459c06049ef665872050992bae 392 SUPERFAMILY SSF53901 168 386 2.21E-63 T 25-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SMA_RS05835 acba27459c06049ef665872050992bae 392 Pfam PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal 245 378 3.6E-15 T 25-04-2016 IPR013746 Hydroxymethylglutaryl-coenzyme A synthase C-terminal domain GO:0004421|GO:0008299 KEGG: 00072+2.3.3.10|KEGG: 00280+2.3.3.10|KEGG: 00650+2.3.3.10|KEGG: 00900+2.3.3.10|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7571|MetaCyc: PWY-922|Reactome: REACT_22258|UniPathway: UPA00058 SMA_RS05835 acba27459c06049ef665872050992bae 392 Pfam PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal 4 164 1.7E-12 T 25-04-2016 IPR013528 Hydroxymethylglutaryl-coenzyme A synthase, N-terminal GO:0004421|GO:0008299 Reactome: REACT_22258 SMA_RS05835 acba27459c06049ef665872050992bae 392 PANTHER PTHR11877 3 392 4.5E-91 T 25-04-2016 SMA_RS05835 acba27459c06049ef665872050992bae 392 SUPERFAMILY SSF53901 2 166 7.68E-37 T 25-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SMA_RS05655 59df8f122c82231c4c7cbc3e083605c4 428 PANTHER PTHR21499 1 370 6.5E-128 T 25-04-2016 SMA_RS05655 59df8f122c82231c4c7cbc3e083605c4 428 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 184 206 - T 25-04-2016 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 SMA_RS05655 59df8f122c82231c4c7cbc3e083605c4 428 SUPERFAMILY SSF55347 138 303 1.11E-51 T 25-04-2016 SMA_RS05655 59df8f122c82231c4c7cbc3e083605c4 428 Pfam PF00742 Homoserine dehydrogenase 138 316 8.3E-61 T 25-04-2016 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 SMA_RS05655 59df8f122c82231c4c7cbc3e083605c4 428 Gene3D G3DSA:3.30.360.10 150 300 1.2E-55 T 25-04-2016 SMA_RS05655 59df8f122c82231c4c7cbc3e083605c4 428 SUPERFAMILY SSF55021 350 418 7.5E-7 T 25-04-2016 SMA_RS05655 59df8f122c82231c4c7cbc3e083605c4 428 SUPERFAMILY SSF51735 3 159 6.76E-33 T 25-04-2016 IPR016040 NAD(P)-binding domain SMA_RS05655 59df8f122c82231c4c7cbc3e083605c4 428 PIRSF PIRSF000098 1 428 8.5E-164 T 25-04-2016 IPR016204 Homoserine dehydrogenase GO:0004412|GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 SMA_RS05655 59df8f122c82231c4c7cbc3e083605c4 428 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 9 130 1.6E-17 T 25-04-2016 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 SMA_RS05655 59df8f122c82231c4c7cbc3e083605c4 428 Gene3D G3DSA:3.30.70.260 349 418 9.7E-5 T 25-04-2016 SMA_RS05655 59df8f122c82231c4c7cbc3e083605c4 428 PANTHER PTHR21499:SF2 1 370 6.5E-128 T 25-04-2016 SMA_RS05655 59df8f122c82231c4c7cbc3e083605c4 428 Gene3D G3DSA:3.40.50.720 2 149 4.4E-47 T 25-04-2016 IPR016040 NAD(P)-binding domain SMA_RS01185 2182a839d1442a38f122f0b3b4139608 256 Gene3D G3DSA:1.10.10.10 1 52 1.3E-8 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMA_RS01185 2182a839d1442a38f122f0b3b4139608 256 SUPERFAMILY SSF46785 4 74 2.96E-15 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMA_RS01185 2182a839d1442a38f122f0b3b4139608 256 SMART SM01134 77 236 4.2E-62 T 25-04-2016 SMA_RS01185 2182a839d1442a38f122f0b3b4139608 256 Gene3D G3DSA:3.40.50.1360 79 216 3.8E-10 T 25-04-2016 SMA_RS01185 2182a839d1442a38f122f0b3b4139608 256 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 25-04-2016 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 SMA_RS01185 2182a839d1442a38f122f0b3b4139608 256 PANTHER PTHR30363 1 239 6.3E-109 T 25-04-2016 SMA_RS01185 2182a839d1442a38f122f0b3b4139608 256 SUPERFAMILY SSF100950 79 236 4.12E-30 T 25-04-2016 SMA_RS01185 2182a839d1442a38f122f0b3b4139608 256 Pfam PF00455 DeoR C terminal sensor domain 79 235 3.2E-48 T 25-04-2016 IPR014036 DeoR C-terminal sensor domain SMA_RS01185 2182a839d1442a38f122f0b3b4139608 256 PANTHER PTHR30363:SF10 1 239 6.3E-109 T 25-04-2016 SMA_RS01185 2182a839d1442a38f122f0b3b4139608 256 SMART SM00420 6 58 2.8E-21 T 25-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 SMA_RS01185 2182a839d1442a38f122f0b3b4139608 256 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 2.2E-10 T 25-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 SMA_RS01185 2182a839d1442a38f122f0b3b4139608 256 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 2.2E-10 T 25-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 SMA_RS01185 2182a839d1442a38f122f0b3b4139608 256 Pfam PF08220 DeoR-like helix-turn-helix domain 6 61 1.6E-19 T 25-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 SMA_RS03575 cc5fa8ed7d2153d80e5a9d967dd68f33 80 ProSitePatterns PS01143 Ribosomal protein L31 signature. 48 69 - T 25-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS03575 cc5fa8ed7d2153d80e5a9d967dd68f33 80 PRINTS PR01249 Ribosomal protein L31 signature 2 19 1.3E-19 T 25-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS03575 cc5fa8ed7d2153d80e5a9d967dd68f33 80 PRINTS PR01249 Ribosomal protein L31 signature 59 77 1.3E-19 T 25-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS03575 cc5fa8ed7d2153d80e5a9d967dd68f33 80 PRINTS PR01249 Ribosomal protein L31 signature 44 59 1.3E-19 T 25-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS03575 cc5fa8ed7d2153d80e5a9d967dd68f33 80 Hamap MF_00502 50S ribosomal protein L31 type B [rpmE2]. 1 80 27.604 T 25-04-2016 IPR027493 Ribosomal protein L31 type B GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS03575 cc5fa8ed7d2153d80e5a9d967dd68f33 80 Pfam PF01197 Ribosomal protein L31 1 78 2.1E-28 T 25-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS03575 cc5fa8ed7d2153d80e5a9d967dd68f33 80 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 79 2.6E-19 T 25-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS03575 cc5fa8ed7d2153d80e5a9d967dd68f33 80 PANTHER PTHR33280:SF2 1 79 3.7E-35 T 25-04-2016 SMA_RS03575 cc5fa8ed7d2153d80e5a9d967dd68f33 80 SUPERFAMILY SSF143800 1 79 4.32E-24 T 25-04-2016 SMA_RS03575 cc5fa8ed7d2153d80e5a9d967dd68f33 80 PANTHER PTHR33280 1 79 3.7E-35 T 25-04-2016 SMA_RS01970 94c1e4df80826d6764b01cdc07928d7d 343 PANTHER PTHR30465:SF75 21 342 2.9E-112 T 25-04-2016 SMA_RS01970 94c1e4df80826d6764b01cdc07928d7d 343 SUPERFAMILY SSF161098 135 323 2.75E-26 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SMA_RS01970 94c1e4df80826d6764b01cdc07928d7d 343 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 28 85 2.1E-13 T 25-04-2016 IPR025966 Oligopeptide transport permease C-like, N-terminal domain SMA_RS01970 94c1e4df80826d6764b01cdc07928d7d 343 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 158 339 1.5E-28 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SMA_RS01970 94c1e4df80826d6764b01cdc07928d7d 343 PANTHER PTHR30465 21 342 2.9E-112 T 25-04-2016 SMA_RS01970 94c1e4df80826d6764b01cdc07928d7d 343 Gene3D G3DSA:1.10.3720.10 134 338 1.5E-23 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SMA_RS01230 c91ef0de339538e86032e12457ee9374 278 SUPERFAMILY SSF50151 2 54 1.31E-14 T 25-04-2016 IPR004341 CAT RNA-binding domain GO:0003723 SMA_RS01230 c91ef0de339538e86032e12457ee9374 278 Gene3D G3DSA:2.30.24.10 3 55 2.7E-19 T 25-04-2016 IPR004341 CAT RNA-binding domain GO:0003723 SMA_RS01230 c91ef0de339538e86032e12457ee9374 278 Gene3D G3DSA:1.10.1790.10 66 164 3.4E-19 T 25-04-2016 IPR011608 PRD domain GO:0006355 SMA_RS01230 c91ef0de339538e86032e12457ee9374 278 SUPERFAMILY SSF63520 198 277 2.62E-19 T 25-04-2016 IPR011608 PRD domain GO:0006355 SMA_RS01230 c91ef0de339538e86032e12457ee9374 278 SMART SM01061 2 60 4.8E-22 T 25-04-2016 IPR004341 CAT RNA-binding domain GO:0003723 SMA_RS01230 c91ef0de339538e86032e12457ee9374 278 Pfam PF00874 PRD domain 190 275 8.5E-18 T 25-04-2016 IPR011608 PRD domain GO:0006355 SMA_RS01230 c91ef0de339538e86032e12457ee9374 278 Pfam PF00874 PRD domain 78 163 1.2E-14 T 25-04-2016 IPR011608 PRD domain GO:0006355 SMA_RS01230 c91ef0de339538e86032e12457ee9374 278 Pfam PF03123 CAT RNA binding domain 3 57 3.4E-19 T 25-04-2016 IPR004341 CAT RNA-binding domain GO:0003723 SMA_RS01230 c91ef0de339538e86032e12457ee9374 278 SUPERFAMILY SSF63520 57 164 1.57E-22 T 25-04-2016 IPR011608 PRD domain GO:0006355 SMA_RS01230 c91ef0de339538e86032e12457ee9374 278 PANTHER PTHR30185 1 278 3.4E-85 T 25-04-2016 SMA_RS01230 c91ef0de339538e86032e12457ee9374 278 PANTHER PTHR30185:SF2 1 278 3.4E-85 T 25-04-2016 SMA_RS01230 c91ef0de339538e86032e12457ee9374 278 Gene3D G3DSA:1.10.1790.10 178 277 5.0E-23 T 25-04-2016 IPR011608 PRD domain GO:0006355 SMA_RS02425 8fe57d5b5b64e4d98aaa589087855997 202 PIRSF PIRSF037785 21 202 5.9E-80 T 25-04-2016 IPR004612 Holliday junction resolvase RecU GO:0005737|GO:0006281|GO:0006310 SMA_RS02425 8fe57d5b5b64e4d98aaa589087855997 202 Pfam PF03838 Recombination protein U 30 193 1.6E-64 T 25-04-2016 IPR004612 Holliday junction resolvase RecU GO:0005737|GO:0006281|GO:0006310 SMA_RS02425 8fe57d5b5b64e4d98aaa589087855997 202 PANTHER PTHR41275 1 202 1.9E-90 T 25-04-2016 SMA_RS02425 8fe57d5b5b64e4d98aaa589087855997 202 SUPERFAMILY SSF52980 32 195 5.63E-64 T 25-04-2016 IPR011335 Restriction endonuclease type II-like SMA_RS02425 8fe57d5b5b64e4d98aaa589087855997 202 Gene3D G3DSA:3.40.1350.10 31 196 1.3E-73 T 25-04-2016 IPR011856 tRNA endonuclease-like domain GO:0003676|GO:0004518 SMA_RS02425 8fe57d5b5b64e4d98aaa589087855997 202 Hamap MF_00130 Holliday junction resolvase RecU [recU]. 1 202 98.149 T 25-04-2016 IPR004612 Holliday junction resolvase RecU GO:0005737|GO:0006281|GO:0006310 SMA_RS02425 8fe57d5b5b64e4d98aaa589087855997 202 TIGRFAM TIGR00648 recU: recombination protein U 29 194 3.0E-63 T 25-04-2016 IPR004612 Holliday junction resolvase RecU GO:0005737|GO:0006281|GO:0006310 SMA_RS01310 284ab89c4f0f5cd8b629a1c76547c0eb 390 Gene3D G3DSA:3.30.230.10 3 210 2.1E-74 T 25-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SMA_RS01310 284ab89c4f0f5cd8b629a1c76547c0eb 390 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 121 132 - T 25-04-2016 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 SMA_RS01310 284ab89c4f0f5cd8b629a1c76547c0eb 390 PIRSF PIRSF000530 1 388 7.8E-120 T 25-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 SMA_RS01310 284ab89c4f0f5cd8b629a1c76547c0eb 390 Gene3D G3DSA:3.30.70.890 211 385 4.3E-55 T 25-04-2016 IPR013750 GHMP kinase, C-terminal domain SMA_RS01310 284ab89c4f0f5cd8b629a1c76547c0eb 390 SUPERFAMILY SSF54211 4 203 1.44E-62 T 25-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SMA_RS01310 284ab89c4f0f5cd8b629a1c76547c0eb 390 TIGRFAM TIGR00131 gal_kin: galactokinase 5 385 1.2E-117 T 25-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 SMA_RS01310 284ab89c4f0f5cd8b629a1c76547c0eb 390 PANTHER PTHR10457:SF6 1 389 4.5E-121 T 25-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 SMA_RS01310 284ab89c4f0f5cd8b629a1c76547c0eb 390 PRINTS PR00473 Galactokinase signature 91 102 3.9E-29 T 25-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 SMA_RS01310 284ab89c4f0f5cd8b629a1c76547c0eb 390 PRINTS PR00473 Galactokinase signature 112 130 3.9E-29 T 25-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 SMA_RS01310 284ab89c4f0f5cd8b629a1c76547c0eb 390 PRINTS PR00473 Galactokinase signature 26 44 3.9E-29 T 25-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 SMA_RS01310 284ab89c4f0f5cd8b629a1c76547c0eb 390 PRINTS PR00473 Galactokinase signature 269 283 3.9E-29 T 25-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 SMA_RS01310 284ab89c4f0f5cd8b629a1c76547c0eb 390 PRINTS PR00959 Mevalonate kinase family signature 162 181 1.4E-42 T 25-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 SMA_RS01310 284ab89c4f0f5cd8b629a1c76547c0eb 390 PRINTS PR00959 Mevalonate kinase family signature 333 350 1.4E-42 T 25-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 SMA_RS01310 284ab89c4f0f5cd8b629a1c76547c0eb 390 PRINTS PR00959 Mevalonate kinase family signature 119 141 1.4E-42 T 25-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 SMA_RS01310 284ab89c4f0f5cd8b629a1c76547c0eb 390 PRINTS PR00959 Mevalonate kinase family signature 24 48 1.4E-42 T 25-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 SMA_RS01310 284ab89c4f0f5cd8b629a1c76547c0eb 390 Pfam PF08544 GHMP kinases C terminal 285 365 2.8E-10 T 25-04-2016 IPR013750 GHMP kinase, C-terminal domain SMA_RS01310 284ab89c4f0f5cd8b629a1c76547c0eb 390 Pfam PF10509 Galactokinase galactose-binding signature 8 57 3.6E-22 T 25-04-2016 IPR019539 Galactokinase galactose-binding domain KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 SMA_RS01310 284ab89c4f0f5cd8b629a1c76547c0eb 390 Hamap MF_00246 Galactokinase [galK]. 24 386 49.541 T 25-04-2016 IPR022963 Galactokinase, bacterial GO:0004335|GO:0006012 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 SMA_RS01310 284ab89c4f0f5cd8b629a1c76547c0eb 390 Pfam PF00288 GHMP kinases N terminal domain 114 181 7.6E-12 T 25-04-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 SMA_RS01310 284ab89c4f0f5cd8b629a1c76547c0eb 390 SUPERFAMILY SSF55060 206 386 1.11E-54 T 25-04-2016 IPR013750 GHMP kinase, C-terminal domain SMA_RS01310 284ab89c4f0f5cd8b629a1c76547c0eb 390 PANTHER PTHR10457 1 389 4.5E-121 T 25-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 SMA_RS01310 284ab89c4f0f5cd8b629a1c76547c0eb 390 ProSitePatterns PS00106 Galactokinase signature. 26 37 - T 25-04-2016 IPR019741 Galactokinase, conserved site KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 SMA_RS07335 b64552bef5a0ad136a2272dc02e2aafc 211 Pfam PF00753 Metallo-beta-lactamase superfamily 14 194 3.4E-28 T 25-04-2016 IPR001279 Metallo-beta-lactamase SMA_RS07335 b64552bef5a0ad136a2272dc02e2aafc 211 SMART SM00849 12 194 1.1E-31 T 25-04-2016 IPR001279 Metallo-beta-lactamase SMA_RS07335 b64552bef5a0ad136a2272dc02e2aafc 211 PANTHER PTHR11935 13 210 1.3E-53 T 25-04-2016 SMA_RS07335 b64552bef5a0ad136a2272dc02e2aafc 211 PANTHER PTHR11935:SF8 13 210 1.3E-53 T 25-04-2016 SMA_RS07335 b64552bef5a0ad136a2272dc02e2aafc 211 SUPERFAMILY SSF56281 4 210 4.32E-46 T 25-04-2016 IPR001279 Metallo-beta-lactamase SMA_RS07335 b64552bef5a0ad136a2272dc02e2aafc 211 Gene3D G3DSA:3.60.15.10 10 210 5.5E-45 T 25-04-2016 IPR001279 Metallo-beta-lactamase SMA_RS07095 866c7b5fd05a0f947a97fbd516d178cb 376 PANTHER PTHR13932:SF5 4 376 4.9E-155 T 25-04-2016 SMA_RS07095 866c7b5fd05a0f947a97fbd516d178cb 376 Pfam PF04055 Radical SAM superfamily 10 173 8.7E-23 T 25-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 SMA_RS07095 866c7b5fd05a0f947a97fbd516d178cb 376 Pfam PF06969 HemN C-terminal domain 299 364 7.4E-20 T 25-04-2016 IPR010723 HemN, C-terminal SMA_RS07095 866c7b5fd05a0f947a97fbd516d178cb 376 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 7 365 6.2E-116 T 25-04-2016 IPR004559 Coproporphyrinogen III oxidase, oxygen-independent related GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00071+1.3.99.-|KEGG: 00280+1.3.99.-|KEGG: 00281+1.3.99.-|KEGG: 00362+1.3.99.-|KEGG: 00626+1.3.99.-|KEGG: 00930+1.3.99.- SMA_RS07095 866c7b5fd05a0f947a97fbd516d178cb 376 Gene3D G3DSA:3.80.30.20 4 237 1.6E-41 T 25-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe SMA_RS07095 866c7b5fd05a0f947a97fbd516d178cb 376 SUPERFAMILY SSF102114 3 374 2.22E-117 T 25-04-2016 SMA_RS07095 866c7b5fd05a0f947a97fbd516d178cb 376 SMART SM00729 5 221 2.3E-61 T 25-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 SMA_RS07095 866c7b5fd05a0f947a97fbd516d178cb 376 PANTHER PTHR13932 4 376 4.9E-155 T 25-04-2016 SMA_RS01040 3fc6bcb1d6dc1e17f67ddbdf65945158 422 PANTHER PTHR13779 5 404 2.1E-155 T 25-04-2016 SMA_RS01040 3fc6bcb1d6dc1e17f67ddbdf65945158 422 SUPERFAMILY SSF52540 4 208 2.45E-44 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS01040 3fc6bcb1d6dc1e17f67ddbdf65945158 422 Gene3D G3DSA:1.10.8.60 141 212 1.2E-11 T 25-04-2016 SMA_RS01040 3fc6bcb1d6dc1e17f67ddbdf65945158 422 Pfam PF16193 AAA C-terminal domain 173 251 1.9E-21 T 25-04-2016 IPR032423 AAA ATPase, C-terminal domain SMA_RS01040 3fc6bcb1d6dc1e17f67ddbdf65945158 422 Gene3D G3DSA:3.40.50.300 5 140 5.8E-29 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS01040 3fc6bcb1d6dc1e17f67ddbdf65945158 422 SUPERFAMILY SSF48019 237 419 1.13E-65 T 25-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 SMA_RS01040 3fc6bcb1d6dc1e17f67ddbdf65945158 422 SMART SM00382 38 150 1.3E-9 T 25-04-2016 IPR003593 AAA+ ATPase domain SMA_RS01040 3fc6bcb1d6dc1e17f67ddbdf65945158 422 Gene3D G3DSA:1.10.3710.10 331 420 2.4E-26 T 25-04-2016 SMA_RS01040 3fc6bcb1d6dc1e17f67ddbdf65945158 422 PANTHER PTHR13779:SF7 5 404 2.1E-155 T 25-04-2016 SMA_RS01040 3fc6bcb1d6dc1e17f67ddbdf65945158 422 Pfam PF12002 MgsA AAA+ ATPase C terminal 252 416 6.7E-61 T 25-04-2016 IPR021886 MgsA AAA+ ATPase C-terminal SMA_RS01040 3fc6bcb1d6dc1e17f67ddbdf65945158 422 Gene3D G3DSA:1.20.272.10 233 330 9.0E-39 T 25-04-2016 SMA_RS01040 3fc6bcb1d6dc1e17f67ddbdf65945158 422 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 42 144 2.7E-15 T 25-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 SMA_RS01905 71411547e49b7f97b0b68434cc2883a9 523 SUPERFAMILY SSF161098 292 491 1.15E-44 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SMA_RS01905 71411547e49b7f97b0b68434cc2883a9 523 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 337 505 3.5E-19 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SMA_RS01905 71411547e49b7f97b0b68434cc2883a9 523 PANTHER PTHR30614 19 511 2.8E-140 T 25-04-2016 SMA_RS01905 71411547e49b7f97b0b68434cc2883a9 523 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 28 258 9.8E-39 T 25-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SMA_RS01905 71411547e49b7f97b0b68434cc2883a9 523 SMART SM00062 27 267 9.1E-40 T 25-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SMA_RS01905 71411547e49b7f97b0b68434cc2883a9 523 SUPERFAMILY SSF53850 1 258 9.37E-45 T 25-04-2016 SMA_RS01905 71411547e49b7f97b0b68434cc2883a9 523 Gene3D G3DSA:3.40.190.10 117 207 2.8E-11 T 25-04-2016 SMA_RS01905 71411547e49b7f97b0b68434cc2883a9 523 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 292 400 1.5E-21 T 25-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 SMA_RS01905 71411547e49b7f97b0b68434cc2883a9 523 Gene3D G3DSA:1.10.3720.10 291 506 3.5E-57 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SMA_RS01905 71411547e49b7f97b0b68434cc2883a9 523 Gene3D G3DSA:3.40.190.10 26 116 3.1E-35 T 25-04-2016 SMA_RS01905 71411547e49b7f97b0b68434cc2883a9 523 Gene3D G3DSA:3.40.190.10 227 263 3.1E-35 T 25-04-2016 SMA_RS01905 71411547e49b7f97b0b68434cc2883a9 523 PANTHER PTHR30614:SF15 19 511 2.8E-140 T 25-04-2016 SMA_RS03725 700020d0f677331f1609cc9a5ee4fa11 339 Pfam PF00781 Diacylglycerol kinase catalytic domain 8 132 3.0E-34 T 25-04-2016 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 SMA_RS03725 700020d0f677331f1609cc9a5ee4fa11 339 PANTHER PTHR12358 5 314 8.7E-122 T 25-04-2016 SMA_RS03725 700020d0f677331f1609cc9a5ee4fa11 339 SUPERFAMILY SSF111331 5 305 2.62E-74 T 25-04-2016 IPR016064 NAD kinase/diacylglycerol kinase-like domain SMA_RS03725 700020d0f677331f1609cc9a5ee4fa11 339 SMART SM00046 7 131 3.3E-6 T 25-04-2016 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 SMA_RS03725 700020d0f677331f1609cc9a5ee4fa11 339 TIGRFAM TIGR00147 TIGR00147: lipid kinase, YegS/Rv2252/BmrU family 6 299 7.3E-77 T 25-04-2016 IPR005218 Diacylglycerol/lipid kinase SMA_RS03725 700020d0f677331f1609cc9a5ee4fa11 339 PANTHER PTHR12358:SF41 5 314 8.7E-122 T 25-04-2016 SMA_RS03725 700020d0f677331f1609cc9a5ee4fa11 339 Gene3D G3DSA:3.40.50.10330 34 98 1.6E-5 T 25-04-2016 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 GO:0003951|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 SMA_RS09905 9df0bd9fe6aab987311dddfc12570345 376 Hamap MF_01692 N-acetyldiaminopimelate deacetylase. 2 374 62.912 T 25-04-2016 IPR023905 Acetyldiaminopimelate deacetylase GO:0009089|GO:0050118 KEGG: 00300+3.5.1.47|MetaCyc: PWY-2941|UniPathway: UPA00034 SMA_RS09905 9df0bd9fe6aab987311dddfc12570345 376 Gene3D G3DSA:3.30.70.360 174 291 3.8E-40 T 25-04-2016 IPR011650 Peptidase M20, dimerisation domain SMA_RS09905 9df0bd9fe6aab987311dddfc12570345 376 SUPERFAMILY SSF55031 174 291 9.55E-30 T 25-04-2016 IPR011650 Peptidase M20, dimerisation domain SMA_RS09905 9df0bd9fe6aab987311dddfc12570345 376 PANTHER PTHR11014 4 373 7.3E-205 T 25-04-2016 SMA_RS09905 9df0bd9fe6aab987311dddfc12570345 376 SUPERFAMILY SSF53187 4 190 1.86E-66 T 25-04-2016 SMA_RS09905 9df0bd9fe6aab987311dddfc12570345 376 SUPERFAMILY SSF53187 292 367 1.86E-66 T 25-04-2016 SMA_RS09905 9df0bd9fe6aab987311dddfc12570345 376 Pfam PF07687 Peptidase dimerisation domain 175 273 6.7E-11 T 25-04-2016 IPR011650 Peptidase M20, dimerisation domain SMA_RS09905 9df0bd9fe6aab987311dddfc12570345 376 Gene3D G3DSA:3.40.630.10 4 171 1.4E-73 T 25-04-2016 SMA_RS09905 9df0bd9fe6aab987311dddfc12570345 376 Gene3D G3DSA:3.40.630.10 292 365 1.4E-73 T 25-04-2016 SMA_RS09905 9df0bd9fe6aab987311dddfc12570345 376 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 5 362 3.8E-91 T 25-04-2016 IPR017439 Amidohydrolase GO:0016787 SMA_RS09905 9df0bd9fe6aab987311dddfc12570345 376 PIRSF PIRSF005962 1 375 7.8E-102 T 25-04-2016 IPR017439 Amidohydrolase GO:0016787 SMA_RS09905 9df0bd9fe6aab987311dddfc12570345 376 PANTHER PTHR11014:SF98 4 373 7.3E-205 T 25-04-2016 SMA_RS09905 9df0bd9fe6aab987311dddfc12570345 376 Pfam PF01546 Peptidase family M20/M25/M40 68 364 5.8E-24 T 25-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 SMA_RS02430 50ef24c1d717218d0c7f726f17cc6ec0 172 PIRSF PIRSF021290 1 172 3.7E-66 T 25-04-2016 IPR010697 Protein of unknown function DUF1273 SMA_RS02430 50ef24c1d717218d0c7f726f17cc6ec0 172 SUPERFAMILY SSF102405 1 171 1.83E-54 T 25-04-2016 SMA_RS02430 50ef24c1d717218d0c7f726f17cc6ec0 172 PANTHER PTHR38440 2 172 7.2E-38 T 25-04-2016 SMA_RS02430 50ef24c1d717218d0c7f726f17cc6ec0 172 Hamap MF_01575 UPF0398 protein . 1 171 34.501 T 25-04-2016 IPR010697 Protein of unknown function DUF1273 SMA_RS02430 50ef24c1d717218d0c7f726f17cc6ec0 172 Gene3D G3DSA:3.40.50.450 1 172 8.0E-58 T 25-04-2016 SMA_RS02430 50ef24c1d717218d0c7f726f17cc6ec0 172 Pfam PF06908 Protein of unknown function (DUF1273) 4 165 4.7E-61 T 25-04-2016 IPR010697 Protein of unknown function DUF1273 SMA_RS03540 70c79b0e87efe3f6d3516d3bd8c50c90 504 SUPERFAMILY SSF50814 318 504 5.78E-76 T 25-04-2016 IPR011038 Calycin-like SMA_RS03540 70c79b0e87efe3f6d3516d3bd8c50c90 504 PRINTS PR00690 Adhesin family signature 31 49 3.0E-10 T 25-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 SMA_RS03540 70c79b0e87efe3f6d3516d3bd8c50c90 504 PRINTS PR00690 Adhesin family signature 194 215 3.0E-10 T 25-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 SMA_RS03540 70c79b0e87efe3f6d3516d3bd8c50c90 504 PRINTS PR00690 Adhesin family signature 75 92 3.0E-10 T 25-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 SMA_RS03540 70c79b0e87efe3f6d3516d3bd8c50c90 504 PRINTS PR00690 Adhesin family signature 247 265 3.0E-10 T 25-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 SMA_RS03540 70c79b0e87efe3f6d3516d3bd8c50c90 504 PRINTS PR00690 Adhesin family signature 62 75 3.0E-10 T 25-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 SMA_RS03540 70c79b0e87efe3f6d3516d3bd8c50c90 504 Gene3D G3DSA:3.40.50.1980 189 305 4.5E-37 T 25-04-2016 SMA_RS03540 70c79b0e87efe3f6d3516d3bd8c50c90 504 SUPERFAMILY SSF53807 30 304 1.62E-82 T 25-04-2016 SMA_RS03540 70c79b0e87efe3f6d3516d3bd8c50c90 504 PRINTS PR00691 Adhesin B signature 31 52 3.5E-14 T 25-04-2016 IPR006129 Adhesin B GO:0007155 SMA_RS03540 70c79b0e87efe3f6d3516d3bd8c50c90 504 PRINTS PR00691 Adhesin B signature 56 74 3.5E-14 T 25-04-2016 IPR006129 Adhesin B GO:0007155 SMA_RS03540 70c79b0e87efe3f6d3516d3bd8c50c90 504 PRINTS PR00691 Adhesin B signature 138 157 3.5E-14 T 25-04-2016 IPR006129 Adhesin B GO:0007155 SMA_RS03540 70c79b0e87efe3f6d3516d3bd8c50c90 504 PRINTS PR00691 Adhesin B signature 243 260 3.5E-14 T 25-04-2016 IPR006129 Adhesin B GO:0007155 SMA_RS03540 70c79b0e87efe3f6d3516d3bd8c50c90 504 PRINTS PR00691 Adhesin B signature 75 94 3.5E-14 T 25-04-2016 IPR006129 Adhesin B GO:0007155 SMA_RS03540 70c79b0e87efe3f6d3516d3bd8c50c90 504 PRINTS PR00691 Adhesin B signature 287 305 3.5E-14 T 25-04-2016 IPR006129 Adhesin B GO:0007155 SMA_RS03540 70c79b0e87efe3f6d3516d3bd8c50c90 504 Pfam PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment 322 504 1.7E-81 T 25-04-2016 IPR015304 ZinT domain GO:0008270 SMA_RS03540 70c79b0e87efe3f6d3516d3bd8c50c90 504 Pfam PF01297 Zinc-uptake complex component A periplasmic 34 305 3.8E-78 T 25-04-2016 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 SMA_RS03540 70c79b0e87efe3f6d3516d3bd8c50c90 504 PANTHER PTHR30477:SF10 1 341 1.6E-103 T 25-04-2016 SMA_RS03540 70c79b0e87efe3f6d3516d3bd8c50c90 504 Gene3D G3DSA:2.40.128.20 316 504 2.5E-82 T 25-04-2016 IPR012674 Calycin SMA_RS03540 70c79b0e87efe3f6d3516d3bd8c50c90 504 PANTHER PTHR30477 1 341 1.6E-103 T 25-04-2016 SMA_RS03540 70c79b0e87efe3f6d3516d3bd8c50c90 504 Gene3D G3DSA:3.40.50.1980 26 188 4.4E-53 T 25-04-2016 SMA_RS00465 1fad4f6af18bfa72a49aee934658c8b2 127 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 8 124 1.6E-58 T 25-04-2016 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS00465 1fad4f6af18bfa72a49aee934658c8b2 127 PIRSF PIRSF002131 2 127 1.5E-52 T 25-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 SMA_RS00465 1fad4f6af18bfa72a49aee934658c8b2 127 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 3 127 33.633 T 25-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 SMA_RS00465 1fad4f6af18bfa72a49aee934658c8b2 127 Pfam PF00411 Ribosomal protein S11 17 126 1.2E-51 T 25-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 SMA_RS00465 1fad4f6af18bfa72a49aee934658c8b2 127 ProSitePatterns PS00054 Ribosomal protein S11 signature. 95 117 - T 25-04-2016 IPR018102 Ribosomal S11, conserved site SMA_RS00465 1fad4f6af18bfa72a49aee934658c8b2 127 SUPERFAMILY SSF53137 12 127 2.94E-49 T 25-04-2016 SMA_RS00465 1fad4f6af18bfa72a49aee934658c8b2 127 Gene3D G3DSA:3.30.420.80 5 127 1.9E-56 T 25-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 SMA_RS00465 1fad4f6af18bfa72a49aee934658c8b2 127 PANTHER PTHR11759 8 127 4.2E-71 T 25-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 SMA_RS06495 65294f585235e6b018e3146bc5a9f6cc 111 PANTHER PTHR13696:SF62 3 108 1.6E-21 T 25-04-2016 SMA_RS06495 65294f585235e6b018e3146bc5a9f6cc 111 PANTHER PTHR13696 3 108 1.6E-21 T 25-04-2016 SMA_RS06495 65294f585235e6b018e3146bc5a9f6cc 111 SUPERFAMILY SSF117916 14 109 1.41E-30 T 25-04-2016 SMA_RS06495 65294f585235e6b018e3146bc5a9f6cc 111 Pfam PF01883 Domain of unknown function DUF59 15 88 2.4E-22 T 25-04-2016 IPR002744 Domain of unknown function DUF59 SMA_RS09185 8cca08fdc7e61b004c920a3f498de465 692 SUPERFAMILY SSF54980 601 688 1.06E-29 T 25-04-2016 IPR009022 Elongation factor G, III-V domain SMA_RS09185 8cca08fdc7e61b004c920a3f498de465 692 SUPERFAMILY SSF54211 477 597 4.55E-44 T 25-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SMA_RS09185 8cca08fdc7e61b004c920a3f498de465 692 Pfam PF03764 Elongation factor G, domain IV 477 596 1.6E-47 T 25-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 SMA_RS09185 8cca08fdc7e61b004c920a3f498de465 692 PANTHER PTHR23115 1 177 0.0 T 25-04-2016 SMA_RS09185 8cca08fdc7e61b004c920a3f498de465 692 PANTHER PTHR23115 301 689 0.0 T 25-04-2016 SMA_RS09185 8cca08fdc7e61b004c920a3f498de465 692 PANTHER PTHR23115 253 281 0.0 T 25-04-2016 SMA_RS09185 8cca08fdc7e61b004c920a3f498de465 692 PANTHER PTHR23115:SF66 1 177 0.0 T 25-04-2016 SMA_RS09185 8cca08fdc7e61b004c920a3f498de465 692 PANTHER PTHR23115:SF66 301 689 0.0 T 25-04-2016 SMA_RS09185 8cca08fdc7e61b004c920a3f498de465 692 PANTHER PTHR23115:SF66 253 281 0.0 T 25-04-2016 SMA_RS09185 8cca08fdc7e61b004c920a3f498de465 692 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 25-04-2016 IPR031157 Tr-type G domain, conserved site SMA_RS09185 8cca08fdc7e61b004c920a3f498de465 692 SUPERFAMILY SSF50447 263 400 1.69E-34 T 25-04-2016 IPR009000 Translation protein, beta-barrel domain SMA_RS09185 8cca08fdc7e61b004c920a3f498de465 692 Pfam PF03144 Elongation factor Tu domain 2 322 389 2.8E-14 T 25-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 SMA_RS09185 8cca08fdc7e61b004c920a3f498de465 692 SUPERFAMILY SSF54980 400 478 5.04E-25 T 25-04-2016 IPR009022 Elongation factor G, III-V domain SMA_RS09185 8cca08fdc7e61b004c920a3f498de465 692 Gene3D G3DSA:3.30.70.240 597 683 1.7E-33 T 25-04-2016 IPR000640 Translation elongation factor EFG, V domain SMA_RS09185 8cca08fdc7e61b004c920a3f498de465 692 Gene3D G3DSA:3.40.50.300 7 285 2.2E-110 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS09185 8cca08fdc7e61b004c920a3f498de465 692 Pfam PF00009 Elongation factor Tu GTP binding domain 9 280 5.0E-71 T 25-04-2016 SMA_RS09185 8cca08fdc7e61b004c920a3f498de465 692 Hamap MF_00054_B Elongation factor G [fusA]. 6 689 110.75 T 25-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 SMA_RS09185 8cca08fdc7e61b004c920a3f498de465 692 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 180 9.4E-44 T 25-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 SMA_RS09185 8cca08fdc7e61b004c920a3f498de465 692 Gene3D G3DSA:3.30.230.10 482 596 1.1E-50 T 25-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SMA_RS09185 8cca08fdc7e61b004c920a3f498de465 692 SUPERFAMILY SSF52540 6 280 8.52E-112 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS09185 8cca08fdc7e61b004c920a3f498de465 692 TIGRFAM TIGR00484 EF-G: translation elongation factor G 1 689 0.0 T 25-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 SMA_RS09185 8cca08fdc7e61b004c920a3f498de465 692 PRINTS PR00315 GTP-binding elongation factor signature 12 25 2.21E-16 T 25-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SMA_RS09185 8cca08fdc7e61b004c920a3f498de465 692 PRINTS PR00315 GTP-binding elongation factor signature 58 66 2.21E-16 T 25-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SMA_RS09185 8cca08fdc7e61b004c920a3f498de465 692 PRINTS PR00315 GTP-binding elongation factor signature 78 88 2.21E-16 T 25-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SMA_RS09185 8cca08fdc7e61b004c920a3f498de465 692 PRINTS PR00315 GTP-binding elongation factor signature 94 105 2.21E-16 T 25-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SMA_RS09185 8cca08fdc7e61b004c920a3f498de465 692 PRINTS PR00315 GTP-binding elongation factor signature 130 139 2.21E-16 T 25-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SMA_RS09185 8cca08fdc7e61b004c920a3f498de465 692 SMART SM00889 478 596 1.7E-73 T 25-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 SMA_RS09185 8cca08fdc7e61b004c920a3f498de465 692 Gene3D G3DSA:2.40.30.10 303 403 1.5E-37 T 25-04-2016 SMA_RS09185 8cca08fdc7e61b004c920a3f498de465 692 Pfam PF00679 Elongation factor G C-terminus 598 684 4.2E-30 T 25-04-2016 IPR000640 Translation elongation factor EFG, V domain SMA_RS09185 8cca08fdc7e61b004c920a3f498de465 692 Pfam PF14492 Elongation Factor G, domain II 402 475 6.2E-34 T 25-04-2016 IPR009022 Elongation factor G, III-V domain SMA_RS09185 8cca08fdc7e61b004c920a3f498de465 692 SMART SM00838 598 685 8.4E-52 T 25-04-2016 IPR000640 Translation elongation factor EFG, V domain SMA_RS09185 8cca08fdc7e61b004c920a3f498de465 692 Gene3D G3DSA:3.30.70.870 404 478 7.1E-38 T 25-04-2016 SMA_RS02340 a94a79e3fc04432c8fbc62e7ebbe1e00 267 ProSitePatterns PS00902 Glutamate 5-kinase signature. 215 232 - T 25-04-2016 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 SMA_RS02340 a94a79e3fc04432c8fbc62e7ebbe1e00 267 TIGRFAM TIGR01027 proB: glutamate 5-kinase 10 265 1.7E-84 T 25-04-2016 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 SMA_RS02340 a94a79e3fc04432c8fbc62e7ebbe1e00 267 PIRSF PIRSF000729 4 267 1.1E-85 T 25-04-2016 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 SMA_RS02340 a94a79e3fc04432c8fbc62e7ebbe1e00 267 PANTHER PTHR11063:SF12 3 263 1.4E-69 T 25-04-2016 SMA_RS02340 a94a79e3fc04432c8fbc62e7ebbe1e00 267 Hamap MF_00456 Glutamate 5-kinase [proB]. 9 266 34.361 T 25-04-2016 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 SMA_RS02340 a94a79e3fc04432c8fbc62e7ebbe1e00 267 Pfam PF00696 Amino acid kinase family 9 239 1.7E-36 T 25-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SMA_RS02340 a94a79e3fc04432c8fbc62e7ebbe1e00 267 PRINTS PR00474 Glutamate 5-kinase family signature 156 183 2.1E-48 T 25-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 SMA_RS02340 a94a79e3fc04432c8fbc62e7ebbe1e00 267 PRINTS PR00474 Glutamate 5-kinase family signature 120 141 2.1E-48 T 25-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 SMA_RS02340 a94a79e3fc04432c8fbc62e7ebbe1e00 267 PRINTS PR00474 Glutamate 5-kinase family signature 217 237 2.1E-48 T 25-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 SMA_RS02340 a94a79e3fc04432c8fbc62e7ebbe1e00 267 PRINTS PR00474 Glutamate 5-kinase family signature 80 108 2.1E-48 T 25-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 SMA_RS02340 a94a79e3fc04432c8fbc62e7ebbe1e00 267 PRINTS PR00474 Glutamate 5-kinase family signature 46 60 2.1E-48 T 25-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 SMA_RS02340 a94a79e3fc04432c8fbc62e7ebbe1e00 267 SUPERFAMILY SSF53633 10 264 3.14E-65 T 25-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SMA_RS02340 a94a79e3fc04432c8fbc62e7ebbe1e00 267 PANTHER PTHR11063 3 263 1.4E-69 T 25-04-2016 SMA_RS02340 a94a79e3fc04432c8fbc62e7ebbe1e00 267 Gene3D G3DSA:3.40.1160.10 9 263 5.7E-53 T 25-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SMA_RS06545 12fdd3bbfd627a98ca30789913444f3f 281 Gene3D G3DSA:3.40.190.10 124 224 1.4E-21 T 25-04-2016 SMA_RS06545 12fdd3bbfd627a98ca30789913444f3f 281 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 44 263 2.6E-56 T 25-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SMA_RS06545 12fdd3bbfd627a98ca30789913444f3f 281 SMART SM00062 43 270 3.2E-52 T 25-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SMA_RS06545 12fdd3bbfd627a98ca30789913444f3f 281 SMART SM00079 43 268 4.8E-5 T 25-04-2016 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 SMA_RS06545 12fdd3bbfd627a98ca30789913444f3f 281 PANTHER PTHR30614:SF15 34 274 5.1E-67 T 25-04-2016 SMA_RS06545 12fdd3bbfd627a98ca30789913444f3f 281 SUPERFAMILY SSF53850 10 263 6.04E-63 T 25-04-2016 SMA_RS06545 12fdd3bbfd627a98ca30789913444f3f 281 PANTHER PTHR30614 34 274 5.1E-67 T 25-04-2016 SMA_RS06545 12fdd3bbfd627a98ca30789913444f3f 281 Gene3D G3DSA:3.40.190.10 228 263 3.4E-39 T 25-04-2016 SMA_RS06545 12fdd3bbfd627a98ca30789913444f3f 281 Gene3D G3DSA:3.40.190.10 40 123 3.4E-39 T 25-04-2016 SMA_RS03630 801fb10103232ba2ffaba2fbeb272336 520 Gene3D G3DSA:3.20.20.70 2 344 1.3E-136 T 25-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SMA_RS03630 801fb10103232ba2ffaba2fbeb272336 520 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 198 211 - T 25-04-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 SMA_RS03630 801fb10103232ba2ffaba2fbeb272336 520 PANTHER PTHR10277:SF9 2 509 5.6E-215 T 25-04-2016 SMA_RS03630 801fb10103232ba2ffaba2fbeb272336 520 PANTHER PTHR10277 2 509 5.6E-215 T 25-04-2016 SMA_RS03630 801fb10103232ba2ffaba2fbeb272336 520 SUPERFAMILY SSF51569 2 290 6.59E-93 T 25-04-2016 SMA_RS03630 801fb10103232ba2ffaba2fbeb272336 520 Hamap MF_01025 2-isopropylmalate synthase [leuA]. 1 510 38.587 T 25-04-2016 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 SMA_RS03630 801fb10103232ba2ffaba2fbeb272336 520 SUPERFAMILY SSF110921 399 496 1.22E-14 T 25-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 SMA_RS03630 801fb10103232ba2ffaba2fbeb272336 520 TIGRFAM TIGR00973 leuA_bact: 2-isopropylmalate synthase 3 496 1.6E-185 T 25-04-2016 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 SMA_RS03630 801fb10103232ba2ffaba2fbeb272336 520 Pfam PF00682 HMGL-like 4 271 3.8E-96 T 25-04-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 SMA_RS03630 801fb10103232ba2ffaba2fbeb272336 520 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 11 27 - T 25-04-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 SMA_RS03630 801fb10103232ba2ffaba2fbeb272336 520 SMART SM00917 368 501 8.9E-24 T 25-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 SMA_RS03630 801fb10103232ba2ffaba2fbeb272336 520 Pfam PF08502 LeuA allosteric (dimerisation) domain 368 496 1.4E-26 T 25-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 SMA_RS06055 53b6d1e59b617659db55134177608b6d 219 Pfam PF06508 Queuosine biosynthesis protein QueC 6 210 5.9E-83 T 25-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 SMA_RS06055 53b6d1e59b617659db55134177608b6d 219 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 6 203 2.7E-79 T 25-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 SMA_RS06055 53b6d1e59b617659db55134177608b6d 219 PANTHER PTHR11587 1 210 1.0E-91 T 25-04-2016 SMA_RS06055 53b6d1e59b617659db55134177608b6d 219 PANTHER PTHR11587:SF3 1 210 1.0E-91 T 25-04-2016 SMA_RS06055 53b6d1e59b617659db55134177608b6d 219 Gene3D G3DSA:3.40.50.620 4 214 2.6E-76 T 25-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SMA_RS06055 53b6d1e59b617659db55134177608b6d 219 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 4 216 48.314 T 25-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 SMA_RS06055 53b6d1e59b617659db55134177608b6d 219 SUPERFAMILY SSF52402 5 211 3.09E-62 T 25-04-2016 SMA_RS06055 53b6d1e59b617659db55134177608b6d 219 PIRSF PIRSF006293 2 218 3.2E-76 T 25-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 SMA_RS07280 0b742e3db2bfcaa5af5341817cd22b47 147 ProSitePatterns PS00201 Flavodoxin signature. 6 22 - T 25-04-2016 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 SMA_RS07280 0b742e3db2bfcaa5af5341817cd22b47 147 PANTHER PTHR19384 1 142 1.3E-47 T 25-04-2016 SMA_RS07280 0b742e3db2bfcaa5af5341817cd22b47 147 SUPERFAMILY SSF52218 4 143 2.42E-37 T 25-04-2016 IPR029039 Flavoprotein-like domain SMA_RS07280 0b742e3db2bfcaa5af5341817cd22b47 147 TIGRFAM TIGR01753 flav_short: flavodoxin 4 142 4.9E-45 T 25-04-2016 IPR010087 Flavodoxin, short chain GO:0010181 SMA_RS07280 0b742e3db2bfcaa5af5341817cd22b47 147 Pfam PF00258 Flavodoxin 6 130 1.9E-21 T 25-04-2016 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 SMA_RS07280 0b742e3db2bfcaa5af5341817cd22b47 147 PRINTS PR00369 Flavodoxin signature 82 92 4.12E-5 T 25-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 SMA_RS07280 0b742e3db2bfcaa5af5341817cd22b47 147 PRINTS PR00369 Flavodoxin signature 5 18 4.12E-5 T 25-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 SMA_RS07280 0b742e3db2bfcaa5af5341817cd22b47 147 PRINTS PR00369 Flavodoxin signature 53 64 4.12E-5 T 25-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 SMA_RS07280 0b742e3db2bfcaa5af5341817cd22b47 147 PANTHER PTHR19384:SF81 1 142 1.3E-47 T 25-04-2016 SMA_RS07280 0b742e3db2bfcaa5af5341817cd22b47 147 Gene3D G3DSA:3.40.50.360 6 144 1.2E-39 T 25-04-2016 IPR029039 Flavoprotein-like domain SMA_RS02695 5724f55d154b13e96035ced907627840 718 Gene3D G3DSA:3.20.70.20 341 504 6.4E-52 T 25-04-2016 SMA_RS02695 5724f55d154b13e96035ced907627840 718 Gene3D G3DSA:3.20.70.20 98 288 6.4E-52 T 25-04-2016 SMA_RS02695 5724f55d154b13e96035ced907627840 718 Gene3D G3DSA:3.20.70.20 566 658 6.4E-52 T 25-04-2016 SMA_RS02695 5724f55d154b13e96035ced907627840 718 Pfam PF02867 Ribonucleotide reductase, barrel domain 167 697 4.3E-138 T 25-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SMA_RS02695 5724f55d154b13e96035ced907627840 718 SUPERFAMILY SSF48168 9 165 2.62E-41 T 25-04-2016 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 SMA_RS02695 5724f55d154b13e96035ced907627840 718 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 555 577 - T 25-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SMA_RS02695 5724f55d154b13e96035ced907627840 718 Pfam PF08343 Ribonucleotide reductase N-terminal 5 88 4.2E-22 T 25-04-2016 IPR013554 Ribonucleotide reductase N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 SMA_RS02695 5724f55d154b13e96035ced907627840 718 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 93 700 1.8E-151 T 25-04-2016 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 SMA_RS02695 5724f55d154b13e96035ced907627840 718 PRINTS PR01183 Ribonucleotide reductase large chain signature 566 593 5.1E-26 T 25-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SMA_RS02695 5724f55d154b13e96035ced907627840 718 PRINTS PR01183 Ribonucleotide reductase large chain signature 484 507 5.1E-26 T 25-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SMA_RS02695 5724f55d154b13e96035ced907627840 718 PRINTS PR01183 Ribonucleotide reductase large chain signature 242 261 5.1E-26 T 25-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SMA_RS02695 5724f55d154b13e96035ced907627840 718 PRINTS PR01183 Ribonucleotide reductase large chain signature 373 384 5.1E-26 T 25-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SMA_RS02695 5724f55d154b13e96035ced907627840 718 PRINTS PR01183 Ribonucleotide reductase large chain signature 456 478 5.1E-26 T 25-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SMA_RS02695 5724f55d154b13e96035ced907627840 718 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 90 162 5.8E-11 T 25-04-2016 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 SMA_RS02695 5724f55d154b13e96035ced907627840 718 TIGRFAM TIGR04170 RNR_1b_NrdE: ribonucleoside-diphosphate reductase, class 1b, alpha subunit 4 718 0.0 T 25-04-2016 IPR026459 Ribonucleotide reductase, class 1b, subunit NrdE KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 SMA_RS02695 5724f55d154b13e96035ced907627840 718 PANTHER PTHR11573 676 700 2.0E-207 T 25-04-2016 SMA_RS02695 5724f55d154b13e96035ced907627840 718 PANTHER PTHR11573 44 525 2.0E-207 T 25-04-2016 SMA_RS02695 5724f55d154b13e96035ced907627840 718 PANTHER PTHR11573 544 659 2.0E-207 T 25-04-2016 SMA_RS02695 5724f55d154b13e96035ced907627840 718 SUPERFAMILY SSF51998 166 700 1.92E-170 T 25-04-2016 SMA_RS01455 fa86ea95e49b219074827eecc7a4ff84 318 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 4 313 4.3E-55 T 25-04-2016 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0015940|GO:0016491|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 SMA_RS01455 fa86ea95e49b219074827eecc7a4ff84 318 Pfam PF02558 Ketopantoate reductase PanE/ApbA 6 146 8.9E-24 T 25-04-2016 IPR013332 Ketopantoate reductase, N-terminal domain GO:0008677|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 SMA_RS01455 fa86ea95e49b219074827eecc7a4ff84 318 SUPERFAMILY SSF48179 185 312 3.74E-29 T 25-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 SMA_RS01455 fa86ea95e49b219074827eecc7a4ff84 318 Gene3D G3DSA:1.10.1040.10 194 315 1.6E-33 T 25-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 SMA_RS01455 fa86ea95e49b219074827eecc7a4ff84 318 Gene3D G3DSA:3.40.50.720 3 193 7.9E-41 T 25-04-2016 IPR016040 NAD(P)-binding domain SMA_RS01455 fa86ea95e49b219074827eecc7a4ff84 318 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 185 311 1.1E-27 T 25-04-2016 IPR013752 Ketopantoate reductase, C-terminal domain GO:0016491|GO:0050661|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 SMA_RS01455 fa86ea95e49b219074827eecc7a4ff84 318 SUPERFAMILY SSF51735 6 126 3.19E-9 T 25-04-2016 IPR016040 NAD(P)-binding domain SMA_RS01455 fa86ea95e49b219074827eecc7a4ff84 318 PANTHER PTHR21708 1 312 2.8E-45 T 25-04-2016 SMA_RS01455 fa86ea95e49b219074827eecc7a4ff84 318 PANTHER PTHR21708:SF24 1 312 2.8E-45 T 25-04-2016 SMA_RS02775 8af61ff75d95cb146aaed5f86a60deba 883 Gene3D G3DSA:3.40.50.620 343 559 1.3E-139 T 25-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SMA_RS02775 8af61ff75d95cb146aaed5f86a60deba 883 Gene3D G3DSA:3.40.50.620 8 196 1.3E-139 T 25-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SMA_RS02775 8af61ff75d95cb146aaed5f86a60deba 883 PANTHER PTHR11946:SF5 1 790 0.0 T 25-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 SMA_RS02775 8af61ff75d95cb146aaed5f86a60deba 883 PANTHER PTHR11946:SF5 810 872 0.0 T 25-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 SMA_RS02775 8af61ff75d95cb146aaed5f86a60deba 883 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 814 879 8.1E-16 T 25-04-2016 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 SMA_RS02775 8af61ff75d95cb146aaed5f86a60deba 883 Gene3D G3DSA:1.10.730.10 560 745 2.2E-56 T 25-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SMA_RS02775 8af61ff75d95cb146aaed5f86a60deba 883 SUPERFAMILY SSF47323 571 829 2.99E-67 T 25-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SMA_RS02775 8af61ff75d95cb146aaed5f86a60deba 883 SUPERFAMILY SSF52374 5 195 7.84E-140 T 25-04-2016 SMA_RS02775 8af61ff75d95cb146aaed5f86a60deba 883 SUPERFAMILY SSF52374 343 570 7.84E-140 T 25-04-2016 SMA_RS02775 8af61ff75d95cb146aaed5f86a60deba 883 TIGRFAM TIGR00422 valS: valine--tRNA ligase 7 860 0.0 T 25-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 SMA_RS02775 8af61ff75d95cb146aaed5f86a60deba 883 SUPERFAMILY SSF50677 193 344 1.31E-61 T 25-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 SMA_RS02775 8af61ff75d95cb146aaed5f86a60deba 883 Gene3D G3DSA:3.90.740.10 197 339 1.9E-50 T 25-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 SMA_RS02775 8af61ff75d95cb146aaed5f86a60deba 883 SUPERFAMILY SSF46589 814 878 2.2E-15 T 25-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 SMA_RS02775 8af61ff75d95cb146aaed5f86a60deba 883 PANTHER PTHR11946 1 790 0.0 T 25-04-2016 SMA_RS02775 8af61ff75d95cb146aaed5f86a60deba 883 PANTHER PTHR11946 810 872 0.0 T 25-04-2016 SMA_RS02775 8af61ff75d95cb146aaed5f86a60deba 883 PRINTS PR00986 Valyl-tRNA synthetase signature 472 490 2.5E-36 T 25-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 SMA_RS02775 8af61ff75d95cb146aaed5f86a60deba 883 PRINTS PR00986 Valyl-tRNA synthetase signature 39 50 2.5E-36 T 25-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 SMA_RS02775 8af61ff75d95cb146aaed5f86a60deba 883 PRINTS PR00986 Valyl-tRNA synthetase signature 233 250 2.5E-36 T 25-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 SMA_RS02775 8af61ff75d95cb146aaed5f86a60deba 883 PRINTS PR00986 Valyl-tRNA synthetase signature 440 461 2.5E-36 T 25-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 SMA_RS02775 8af61ff75d95cb146aaed5f86a60deba 883 PRINTS PR00986 Valyl-tRNA synthetase signature 348 361 2.5E-36 T 25-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 SMA_RS02775 8af61ff75d95cb146aaed5f86a60deba 883 Pfam PF08264 Anticodon-binding domain of tRNA 610 753 3.1E-41 T 25-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 SMA_RS02775 8af61ff75d95cb146aaed5f86a60deba 883 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 18 560 4.6E-216 T 25-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SMA_RS02775 8af61ff75d95cb146aaed5f86a60deba 883 Hamap MF_02004 Valine--tRNA ligase [valS]. 5 879 15.742 T 25-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 SMA_RS02775 8af61ff75d95cb146aaed5f86a60deba 883 Gene3D G3DSA:1.10.287.380 807 862 3.6E-5 T 25-04-2016 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 SMA_RS02775 8af61ff75d95cb146aaed5f86a60deba 883 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 46 57 - T 25-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SMA_RS04485 ccd115cd6b87e3a03af26191f72a817b 217 PANTHER PTHR11264 1 215 1.3E-111 T 25-04-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 SMA_RS04485 ccd115cd6b87e3a03af26191f72a817b 217 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 55 64 - T 25-04-2016 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 SMA_RS04485 ccd115cd6b87e3a03af26191f72a817b 217 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 4 208 5.6E-77 T 25-04-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 SMA_RS04485 ccd115cd6b87e3a03af26191f72a817b 217 SMART SM00986 47 205 1.2E-35 T 25-04-2016 IPR005122 Uracil-DNA glycosylase-like SMA_RS04485 ccd115cd6b87e3a03af26191f72a817b 217 Pfam PF03167 Uracil DNA glycosylase superfamily 52 204 2.1E-22 T 25-04-2016 IPR005122 Uracil-DNA glycosylase-like SMA_RS04485 ccd115cd6b87e3a03af26191f72a817b 217 SUPERFAMILY SSF52141 3 215 2.4E-85 T 25-04-2016 IPR005122 Uracil-DNA glycosylase-like SMA_RS04485 ccd115cd6b87e3a03af26191f72a817b 217 SMART SM00987 47 205 1.2E-35 T 25-04-2016 SMA_RS04485 ccd115cd6b87e3a03af26191f72a817b 217 Gene3D G3DSA:3.40.470.10 3 215 1.8E-90 T 25-04-2016 IPR005122 Uracil-DNA glycosylase-like SMA_RS04485 ccd115cd6b87e3a03af26191f72a817b 217 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 3 216 38.694 T 25-04-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 SMA_RS00470 894db89abf2a93ace868c5a64364113c 312 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 251 309 4.0E-26 T 25-04-2016 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SMA_RS00470 894db89abf2a93ace868c5a64364113c 312 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 1 311 35.925 T 25-04-2016 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SMA_RS00470 894db89abf2a93ace868c5a64364113c 312 SMART SM00662 18 225 3.7E-91 T 25-04-2016 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SMA_RS00470 894db89abf2a93ace868c5a64364113c 312 SUPERFAMILY SSF56553 48 169 6.93E-42 T 25-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SMA_RS00470 894db89abf2a93ace868c5a64364113c 312 SUPERFAMILY SSF55257 4 48 1.94E-29 T 25-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SMA_RS00470 894db89abf2a93ace868c5a64364113c 312 SUPERFAMILY SSF55257 170 224 1.94E-29 T 25-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SMA_RS00470 894db89abf2a93ace868c5a64364113c 312 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 18 310 2.3E-115 T 25-04-2016 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SMA_RS00470 894db89abf2a93ace868c5a64364113c 312 Gene3D G3DSA:1.10.150.20 244 311 1.4E-31 T 25-04-2016 SMA_RS00470 894db89abf2a93ace868c5a64364113c 312 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 238 302 2.3E-27 T 25-04-2016 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SMA_RS00470 894db89abf2a93ace868c5a64364113c 312 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 57 150 4.5E-25 T 25-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SMA_RS00470 894db89abf2a93ace868c5a64364113c 312 PANTHER PTHR32108:SF0 1 312 1.5E-134 T 25-04-2016 SMA_RS00470 894db89abf2a93ace868c5a64364113c 312 PANTHER PTHR32108 1 312 1.5E-134 T 25-04-2016 SMA_RS00470 894db89abf2a93ace868c5a64364113c 312 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 24 219 1.6E-20 T 25-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SMA_RS00470 894db89abf2a93ace868c5a64364113c 312 SUPERFAMILY SSF47789 245 311 4.84E-23 T 25-04-2016 SMA_RS00470 894db89abf2a93ace868c5a64364113c 312 Gene3D G3DSA:2.170.120.12 48 168 1.6E-45 T 25-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SMA_RS00470 894db89abf2a93ace868c5a64364113c 312 Gene3D G3DSA:3.30.1360.10 171 225 6.6E-6 T 25-04-2016 SMA_RS00470 894db89abf2a93ace868c5a64364113c 312 Gene3D G3DSA:3.30.1360.10 11 47 6.6E-6 T 25-04-2016 SMA_RS09950 87b2da1f06bac1c6a2af8dac20576ee9 176 PIRSF PIRSF016661 1 174 3.7E-31 T 25-04-2016 IPR003784 BioY protein GO:0005886|GO:0015225|GO:0015878 SMA_RS09950 87b2da1f06bac1c6a2af8dac20576ee9 176 PANTHER PTHR34295 3 176 1.3E-38 T 25-04-2016 SMA_RS09950 87b2da1f06bac1c6a2af8dac20576ee9 176 Pfam PF02632 BioY family 30 169 6.4E-28 T 25-04-2016 IPR003784 BioY protein GO:0005886|GO:0015225|GO:0015878 SMA_RS09950 87b2da1f06bac1c6a2af8dac20576ee9 176 PANTHER PTHR34295:SF2 3 176 1.3E-38 T 25-04-2016 SMA_RS00675 a7f04428d5b4fdbef6764587247e67e0 1190 Pfam PF04563 RNA polymerase beta subunit 28 460 1.7E-28 T 25-04-2016 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SMA_RS00675 a7f04428d5b4fdbef6764587247e67e0 1190 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 220 892 6.0E-292 T 25-04-2016 IPR010243 DNA-directed RNA polymerase, beta subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SMA_RS00675 a7f04428d5b4fdbef6764587247e67e0 1190 Pfam PF00562 RNA polymerase Rpb2, domain 6 679 1065 3.1E-163 T 25-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SMA_RS00675 a7f04428d5b4fdbef6764587247e67e0 1190 Pfam PF04565 RNA polymerase Rpb2, domain 3 473 538 8.4E-29 T 25-04-2016 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SMA_RS00675 a7f04428d5b4fdbef6764587247e67e0 1190 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 15 1143 12.299 T 25-04-2016 IPR010243 DNA-directed RNA polymerase, beta subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SMA_RS00675 a7f04428d5b4fdbef6764587247e67e0 1190 Pfam PF04560 RNA polymerase Rpb2, domain 7 1067 1141 1.0E-25 T 25-04-2016 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SMA_RS00675 a7f04428d5b4fdbef6764587247e67e0 1190 Gene3D G3DSA:3.90.1100.10 21 140 7.5E-147 T 25-04-2016 SMA_RS00675 a7f04428d5b4fdbef6764587247e67e0 1190 Gene3D G3DSA:3.90.1100.10 405 551 7.5E-147 T 25-04-2016 SMA_RS00675 a7f04428d5b4fdbef6764587247e67e0 1190 Gene3D G3DSA:3.90.1100.10 621 675 7.5E-147 T 25-04-2016 SMA_RS00675 a7f04428d5b4fdbef6764587247e67e0 1190 Gene3D G3DSA:2.40.270.10 915 1043 6.4E-80 T 25-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SMA_RS00675 a7f04428d5b4fdbef6764587247e67e0 1190 Gene3D G3DSA:2.40.270.10 748 775 6.4E-80 T 25-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SMA_RS00675 a7f04428d5b4fdbef6764587247e67e0 1190 Pfam PF04561 RNA polymerase Rpb2, domain 2 369 414 5.0E-8 T 25-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SMA_RS00675 a7f04428d5b4fdbef6764587247e67e0 1190 Pfam PF04561 RNA polymerase Rpb2, domain 2 140 293 7.5E-23 T 25-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SMA_RS00675 a7f04428d5b4fdbef6764587247e67e0 1190 SUPERFAMILY SSF64484 382 1151 0.0 T 25-04-2016 SMA_RS00675 a7f04428d5b4fdbef6764587247e67e0 1190 SUPERFAMILY SSF64484 14 291 0.0 T 25-04-2016 SMA_RS00675 a7f04428d5b4fdbef6764587247e67e0 1190 Gene3D G3DSA:2.30.150.10 552 618 2.9E-24 T 25-04-2016 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SMA_RS00675 a7f04428d5b4fdbef6764587247e67e0 1190 Pfam PF10385 RNA polymerase beta subunit external 1 domain 551 618 2.8E-22 T 25-04-2016 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SMA_RS00675 a7f04428d5b4fdbef6764587247e67e0 1190 Gene3D G3DSA:2.40.50.100 677 747 2.4E-26 T 25-04-2016 SMA_RS00675 a7f04428d5b4fdbef6764587247e67e0 1190 PANTHER PTHR20856:SF20 2 291 0.0 T 25-04-2016 SMA_RS00675 a7f04428d5b4fdbef6764587247e67e0 1190 PANTHER PTHR20856:SF20 383 1147 0.0 T 25-04-2016 SMA_RS00675 a7f04428d5b4fdbef6764587247e67e0 1190 Gene3D G3DSA:3.90.1110.10 142 300 3.3E-65 T 25-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SMA_RS00675 a7f04428d5b4fdbef6764587247e67e0 1190 Gene3D G3DSA:3.90.1110.10 380 404 3.3E-65 T 25-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SMA_RS00675 a7f04428d5b4fdbef6764587247e67e0 1190 PANTHER PTHR20856 2 291 0.0 T 25-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SMA_RS00675 a7f04428d5b4fdbef6764587247e67e0 1190 PANTHER PTHR20856 383 1147 0.0 T 25-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SMA_RS00675 a7f04428d5b4fdbef6764587247e67e0 1190 ProSitePatterns PS01166 RNA polymerases beta chain signature. 918 930 - T 25-04-2016 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SMA_RS00675 a7f04428d5b4fdbef6764587247e67e0 1190 Gene3D G3DSA:2.40.50.150 782 914 8.5E-58 T 25-04-2016 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SMA_RS00040 88156d63b327a33e227bf3b3fc7a001b 90 Pfam PF01479 S4 domain 1 47 2.1E-9 T 25-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SMA_RS00040 88156d63b327a33e227bf3b3fc7a001b 90 Gene3D G3DSA:3.10.290.10 1 85 1.6E-23 T 25-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SMA_RS00040 88156d63b327a33e227bf3b3fc7a001b 90 SUPERFAMILY SSF55174 1 77 1.96E-20 T 25-04-2016 SMA_RS00040 88156d63b327a33e227bf3b3fc7a001b 90 SMART SM00363 1 62 1.1E-7 T 25-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SMA_RS00040 88156d63b327a33e227bf3b3fc7a001b 90 PIRSF PIRSF038881 1 89 1.2E-39 T 25-04-2016 IPR025490 RNA-binding protein, HP1423 type SMA_RS06205 88a264b56377567baaea98f2a82b248d 409 PANTHER PTHR32347:SF14 3 395 8.5E-57 T 25-04-2016 SMA_RS06205 88a264b56377567baaea98f2a82b248d 409 PANTHER PTHR32347 3 395 8.5E-57 T 25-04-2016 SMA_RS06205 88a264b56377567baaea98f2a82b248d 409 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 89 272 6.0E-13 T 25-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain SMA_RS06205 88a264b56377567baaea98f2a82b248d 409 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 50 392 2.1E-30 T 25-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 SMA_RS06205 88a264b56377567baaea98f2a82b248d 409 Gene3D G3DSA:2.40.50.100 193 212 4.0E-4 T 25-04-2016 SMA_RS06205 88a264b56377567baaea98f2a82b248d 409 Gene3D G3DSA:2.40.50.100 90 107 4.0E-4 T 25-04-2016 SMA_RS06235 40b7759e60513ca25145a36378867b04 298 SUPERFAMILY SSF55120 67 294 4.32E-79 T 25-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 SMA_RS06235 40b7759e60513ca25145a36378867b04 298 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 128 142 - T 25-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 SMA_RS06235 40b7759e60513ca25145a36378867b04 298 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 7 294 8.2E-98 T 25-04-2016 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 SMA_RS06235 40b7759e60513ca25145a36378867b04 298 SMART SM00363 10 73 4.6E-11 T 25-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SMA_RS06235 40b7759e60513ca25145a36378867b04 298 SUPERFAMILY SSF55174 9 95 9.76E-14 T 25-04-2016 SMA_RS06235 40b7759e60513ca25145a36378867b04 298 PANTHER PTHR11079:SF71 11 294 4.0E-136 T 25-04-2016 SMA_RS06235 40b7759e60513ca25145a36378867b04 298 PANTHER PTHR11079 11 294 4.0E-136 T 25-04-2016 SMA_RS06235 40b7759e60513ca25145a36378867b04 298 Pfam PF00849 RNA pseudouridylate synthase 83 235 1.7E-34 T 25-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 SMA_RS06235 40b7759e60513ca25145a36378867b04 298 Pfam PF01479 S4 domain 10 55 5.7E-10 T 25-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SMA_RS06235 40b7759e60513ca25145a36378867b04 298 Gene3D G3DSA:3.10.290.10 10 58 7.2E-17 T 25-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SMA_RS01115 a80aba16c59f1fc47c6d07445e137de1 316 PANTHER PTHR18964:SF114 1 255 1.2E-104 T 25-04-2016 SMA_RS01115 a80aba16c59f1fc47c6d07445e137de1 316 SUPERFAMILY SSF51182 1 311 1.33E-103 T 25-04-2016 IPR011051 RmlC-like cupin domain SMA_RS01115 a80aba16c59f1fc47c6d07445e137de1 316 Pfam PF01238 Phosphomannose isomerase type I 239 312 8.1E-8 T 25-04-2016 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882 SMA_RS01115 a80aba16c59f1fc47c6d07445e137de1 316 Pfam PF01238 Phosphomannose isomerase type I 5 196 3.5E-49 T 25-04-2016 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882 SMA_RS01115 a80aba16c59f1fc47c6d07445e137de1 316 TIGRFAM TIGR00218 manA: mannose-6-phosphate isomerase, class I 105 312 2.9E-44 T 25-04-2016 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882 SMA_RS01115 a80aba16c59f1fc47c6d07445e137de1 316 PIRSF PIRSF036894 2 314 1.4E-129 T 25-04-2016 IPR014628 Mannose-6-phosphate isomerase, Firmicutes type, short form GO:0004476|GO:0005975 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882 SMA_RS01115 a80aba16c59f1fc47c6d07445e137de1 316 PANTHER PTHR18964 1 255 1.2E-104 T 25-04-2016 SMA_RS01115 a80aba16c59f1fc47c6d07445e137de1 316 Gene3D G3DSA:2.60.120.10 2 216 5.5E-78 T 25-04-2016 IPR014710 RmlC-like jelly roll fold SMA_RS01115 a80aba16c59f1fc47c6d07445e137de1 316 Gene3D G3DSA:2.60.120.10 226 312 1.3E-31 T 25-04-2016 IPR014710 RmlC-like jelly roll fold SMA_RS02070 41ed47ed34de5539820d1987ca8fff12 140 SUPERFAMILY SSF54637 5 138 4.61E-47 T 25-04-2016 IPR029069 HotDog domain SMA_RS02070 41ed47ed34de5539820d1987ca8fff12 140 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 2 138 4.9E-62 T 25-04-2016 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 SMA_RS02070 41ed47ed34de5539820d1987ca8fff12 140 PANTHER PTHR30272 1 140 4.8E-79 T 25-04-2016 SMA_RS02070 41ed47ed34de5539820d1987ca8fff12 140 Pfam PF07977 FabA-like domain 11 131 4.5E-36 T 25-04-2016 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 SMA_RS02070 41ed47ed34de5539820d1987ca8fff12 140 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 2 140 34.215 T 25-04-2016 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 SMA_RS02070 41ed47ed34de5539820d1987ca8fff12 140 Gene3D G3DSA:3.10.129.10 1 138 3.1E-56 T 25-04-2016 IPR029069 HotDog domain SMA_RS09225 ca6782144376ed90181b24a228a794b5 290 Pfam PF03193 Protein of unknown function, DUF258 58 215 3.0E-58 T 25-04-2016 IPR010914 RsgA type GTPase domain GO:0003924|GO:0005525 SMA_RS09225 ca6782144376ed90181b24a228a794b5 290 PANTHER PTHR32120:SF2 2 290 3.7E-112 T 25-04-2016 SMA_RS09225 ca6782144376ed90181b24a228a794b5 290 Hamap MF_01820 Putative ribosome biogenesis GTPase RsgA [rsgA]. 1 280 38.672 T 25-04-2016 IPR004881 Ribosome biogenesis GTPase RsgA, putative GO:0003924|GO:0005525 SMA_RS09225 ca6782144376ed90181b24a228a794b5 290 SUPERFAMILY SSF52540 64 280 1.01E-54 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS09225 ca6782144376ed90181b24a228a794b5 290 PANTHER PTHR32120 2 290 3.7E-112 T 25-04-2016 SMA_RS09225 ca6782144376ed90181b24a228a794b5 290 Gene3D G3DSA:3.40.50.300 62 214 1.1E-45 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS09225 ca6782144376ed90181b24a228a794b5 290 Pfam PF16745 RsgA N-terminal domain 2 55 1.4E-24 T 25-04-2016 IPR031944 Ribosome biogenesis GTPase RsgA, N-terminal SMA_RS09225 ca6782144376ed90181b24a228a794b5 290 Gene3D G3DSA:1.10.40.50 219 288 4.5E-26 T 25-04-2016 SMA_RS09225 ca6782144376ed90181b24a228a794b5 290 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 39 273 2.9E-73 T 25-04-2016 IPR004881 Ribosome biogenesis GTPase RsgA, putative GO:0003924|GO:0005525 SMA_RS09225 ca6782144376ed90181b24a228a794b5 290 Gene3D G3DSA:2.40.50.140 2 59 1.5E-26 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMA_RS09225 ca6782144376ed90181b24a228a794b5 290 SUPERFAMILY SSF50249 2 62 1.54E-15 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMA_RS07405 a5ccc4437270247e6196a4a07c17f067 169 Pfam PF13358 DDE superfamily endonuclease 2 137 1.6E-21 T 25-04-2016 SMA_RS07405 a5ccc4437270247e6196a4a07c17f067 169 SUPERFAMILY SSF53098 32 147 3.29E-6 T 25-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMA_RS00490 a5ccc4437270247e6196a4a07c17f067 169 Pfam PF13358 DDE superfamily endonuclease 2 137 1.6E-21 T 25-04-2016 SMA_RS00490 a5ccc4437270247e6196a4a07c17f067 169 SUPERFAMILY SSF53098 32 147 3.29E-6 T 25-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMA_RS05150 a2723b51a4d5f8bef99b87184ffa8408 286 SUPERFAMILY SSF53613 5 275 1.25E-45 T 25-04-2016 IPR029056 Ribokinase-like SMA_RS05150 a2723b51a4d5f8bef99b87184ffa8408 286 Pfam PF08543 Phosphomethylpyrimidine kinase 68 258 1.5E-18 T 25-04-2016 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase UniPathway: UPA00647 SMA_RS05150 a2723b51a4d5f8bef99b87184ffa8408 286 PANTHER PTHR10534 1 260 1.9E-28 T 25-04-2016 IPR004625 Pyridoxine kinase GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 SMA_RS05150 a2723b51a4d5f8bef99b87184ffa8408 286 Gene3D G3DSA:3.40.1190.20 4 263 5.5E-50 T 25-04-2016 IPR029056 Ribokinase-like SMA_RS05150 a2723b51a4d5f8bef99b87184ffa8408 286 PANTHER PTHR10534:SF0 1 260 1.9E-28 T 25-04-2016 SMA_RS07260 2a225345eff3b6599f145829cb24c3ac 406 Gene3D G3DSA:1.10.3080.10 17 398 1.1E-42 T 25-04-2016 IPR014743 Chloride channel, core GO:0005216|GO:0055085 SMA_RS07260 2a225345eff3b6599f145829cb24c3ac 406 PANTHER PTHR11689 18 332 1.9E-16 T 25-04-2016 SMA_RS07260 2a225345eff3b6599f145829cb24c3ac 406 SUPERFAMILY SSF81340 13 401 1.83E-71 T 25-04-2016 IPR014743 Chloride channel, core GO:0005216|GO:0055085 SMA_RS07260 2a225345eff3b6599f145829cb24c3ac 406 Pfam PF00654 Voltage gated chloride channel 62 393 4.3E-59 T 25-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 SMA_RS07260 2a225345eff3b6599f145829cb24c3ac 406 PANTHER PTHR11689:SF14 18 332 1.9E-16 T 25-04-2016 SMA_RS07260 2a225345eff3b6599f145829cb24c3ac 406 PRINTS PR00762 Chloride channel signature 316 336 6.0E-6 T 25-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 SMA_RS07260 2a225345eff3b6599f145829cb24c3ac 406 PRINTS PR00762 Chloride channel signature 153 172 6.0E-6 T 25-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 SMA_RS08075 fb426ff3b9d8bc73c9f2e8962afac7f9 236 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SMA_RS08075 fb426ff3b9d8bc73c9f2e8962afac7f9 236 Pfam PF00005 ABC transporter 19 164 8.6E-33 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMA_RS08075 fb426ff3b9d8bc73c9f2e8962afac7f9 236 SUPERFAMILY SSF52540 3 234 2.66E-61 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS08075 fb426ff3b9d8bc73c9f2e8962afac7f9 236 PANTHER PTHR24220 5 235 2.0E-135 T 25-04-2016 SMA_RS08075 fb426ff3b9d8bc73c9f2e8962afac7f9 236 Gene3D G3DSA:3.40.50.300 2 231 1.7E-66 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS08075 fb426ff3b9d8bc73c9f2e8962afac7f9 236 PANTHER PTHR24220:SF568 5 235 2.0E-135 T 25-04-2016 SMA_RS08075 fb426ff3b9d8bc73c9f2e8962afac7f9 236 PIRSF PIRSF039137 1 236 2.6E-111 T 25-04-2016 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein GO:0015658|GO:0015803 SMA_RS08075 fb426ff3b9d8bc73c9f2e8962afac7f9 236 SMART SM00382 28 215 1.8E-6 T 25-04-2016 IPR003593 AAA+ ATPase domain SMA_RS01715 49c8a5443b7a3890da292ff0f5458927 112 SUPERFAMILY SSF54001 60 96 6.08E-5 T 25-04-2016 SMA_RS10295 3476cce7e8cdbec101fe15520abb029c 108 Pfam PF03551 Transcriptional regulator PadR-like family 14 81 2.5E-18 T 25-04-2016 IPR005149 Transcription regulator PadR, N-terminal SMA_RS10295 3476cce7e8cdbec101fe15520abb029c 108 SUPERFAMILY SSF46785 3 101 6.25E-20 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMA_RS10295 3476cce7e8cdbec101fe15520abb029c 108 PANTHER PTHR33169 9 100 1.3E-20 T 25-04-2016 SMA_RS10295 3476cce7e8cdbec101fe15520abb029c 108 PANTHER PTHR33169:SF3 9 100 1.3E-20 T 25-04-2016 SMA_RS10295 3476cce7e8cdbec101fe15520abb029c 108 Gene3D G3DSA:1.10.10.10 8 101 2.2E-25 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMA_RS02415 f90362976b56839988c60e4ba6e0a248 445 ProSitePatterns PS00639 Eukaryotic thiol (cysteine) proteases histidine active site. 361 371 - T 25-04-2016 IPR025660 Cysteine peptidase, histidine active site SMA_RS02415 f90362976b56839988c60e4ba6e0a248 445 ProSitePatterns PS00139 Eukaryotic thiol (cysteine) proteases cysteine active site. 63 74 - T 25-04-2016 IPR000169 Cysteine peptidase, cysteine active site SMA_RS02415 f90362976b56839988c60e4ba6e0a248 445 SUPERFAMILY SSF54001 7 443 8.42E-127 T 25-04-2016 SMA_RS02415 f90362976b56839988c60e4ba6e0a248 445 Pfam PF03051 Peptidase C1-like family 4 440 2.6E-206 T 25-04-2016 IPR004134 Peptidase C1B, bleomycin hydrolase GO:0004197|GO:0006508 SMA_RS02415 f90362976b56839988c60e4ba6e0a248 445 PANTHER PTHR10363:SF4 4 444 4.7E-260 T 25-04-2016 SMA_RS02415 f90362976b56839988c60e4ba6e0a248 445 PANTHER PTHR10363 4 444 4.7E-260 T 25-04-2016 IPR004134 Peptidase C1B, bleomycin hydrolase GO:0004197|GO:0006508 SMA_RS02415 f90362976b56839988c60e4ba6e0a248 445 PIRSF PIRSF005700 1 444 1.2E-177 T 25-04-2016 IPR004134 Peptidase C1B, bleomycin hydrolase GO:0004197|GO:0006508 SMA_RS02415 f90362976b56839988c60e4ba6e0a248 445 Gene3D G3DSA:3.90.70.10 51 443 2.3E-174 T 25-04-2016 SMA_RS00390 d13133eb13fb76c9ad7d678572fe84e0 122 SUPERFAMILY SSF50193 1 122 1.44E-49 T 25-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 SMA_RS00390 d13133eb13fb76c9ad7d678572fe84e0 122 SMART SM01374 1 122 1.9E-84 T 25-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 SMA_RS00390 d13133eb13fb76c9ad7d678572fe84e0 122 PANTHER PTHR11761 1 122 1.8E-73 T 25-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 SMA_RS00390 d13133eb13fb76c9ad7d678572fe84e0 122 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 122 26.031 T 25-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 SMA_RS00390 d13133eb13fb76c9ad7d678572fe84e0 122 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 25-04-2016 IPR019972 Ribosomal protein L14P, conserved site SMA_RS00390 d13133eb13fb76c9ad7d678572fe84e0 122 Pfam PF00238 Ribosomal protein L14p/L23e 1 122 2.0E-53 T 25-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 SMA_RS00390 d13133eb13fb76c9ad7d678572fe84e0 122 Gene3D G3DSA:2.40.150.20 1 122 6.8E-52 T 25-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 SMA_RS00390 d13133eb13fb76c9ad7d678572fe84e0 122 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 122 3.6E-56 T 25-04-2016 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 SMA_RS09085 a26d3547e32114e76ea9f35305e573f9 195 Gene3D G3DSA:3.30.420.10 5 168 6.1E-30 T 25-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMA_RS09085 a26d3547e32114e76ea9f35305e573f9 195 PANTHER PTHR30231 6 171 1.2E-23 T 25-04-2016 SMA_RS09085 a26d3547e32114e76ea9f35305e573f9 195 SMART SM00479 6 171 6.4E-25 T 25-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III SMA_RS09085 a26d3547e32114e76ea9f35305e573f9 195 Pfam PF00929 Exonuclease 8 162 7.9E-16 T 25-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III SMA_RS09085 a26d3547e32114e76ea9f35305e573f9 195 SUPERFAMILY SSF53098 6 171 1.07E-30 T 25-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMA_RS04930 531af8fd81b56d9c5ca276144a4a1dd7 418 PANTHER PTHR33498 1 414 1.1E-154 T 25-04-2016 SMA_RS04930 531af8fd81b56d9c5ca276144a4a1dd7 418 Pfam PF01610 Transposase 157 400 1.5E-55 T 25-04-2016 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain SMA_RS04930 531af8fd81b56d9c5ca276144a4a1dd7 418 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 91 140 1.4E-9 T 25-04-2016 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain SMA_RS04930 531af8fd81b56d9c5ca276144a4a1dd7 418 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 41 85 3.7E-11 T 25-04-2016 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger SMA_RS04930 531af8fd81b56d9c5ca276144a4a1dd7 418 PANTHER PTHR33498:SF1 1 414 1.1E-154 T 25-04-2016 SMA_RS08425 531af8fd81b56d9c5ca276144a4a1dd7 418 PANTHER PTHR33498 1 414 1.1E-154 T 25-04-2016 SMA_RS08425 531af8fd81b56d9c5ca276144a4a1dd7 418 Pfam PF01610 Transposase 157 400 1.5E-55 T 25-04-2016 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain SMA_RS08425 531af8fd81b56d9c5ca276144a4a1dd7 418 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 91 140 1.4E-9 T 25-04-2016 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain SMA_RS08425 531af8fd81b56d9c5ca276144a4a1dd7 418 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 41 85 3.7E-11 T 25-04-2016 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger SMA_RS08425 531af8fd81b56d9c5ca276144a4a1dd7 418 PANTHER PTHR33498:SF1 1 414 1.1E-154 T 25-04-2016 SMA_RS03735 531af8fd81b56d9c5ca276144a4a1dd7 418 PANTHER PTHR33498 1 414 1.1E-154 T 25-04-2016 SMA_RS03735 531af8fd81b56d9c5ca276144a4a1dd7 418 Pfam PF01610 Transposase 157 400 1.5E-55 T 25-04-2016 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain SMA_RS03735 531af8fd81b56d9c5ca276144a4a1dd7 418 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 91 140 1.4E-9 T 25-04-2016 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain SMA_RS03735 531af8fd81b56d9c5ca276144a4a1dd7 418 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 41 85 3.7E-11 T 25-04-2016 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger SMA_RS03735 531af8fd81b56d9c5ca276144a4a1dd7 418 PANTHER PTHR33498:SF1 1 414 1.1E-154 T 25-04-2016 SMA_RS07775 531af8fd81b56d9c5ca276144a4a1dd7 418 PANTHER PTHR33498 1 414 1.1E-154 T 25-04-2016 SMA_RS07775 531af8fd81b56d9c5ca276144a4a1dd7 418 Pfam PF01610 Transposase 157 400 1.5E-55 T 25-04-2016 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain SMA_RS07775 531af8fd81b56d9c5ca276144a4a1dd7 418 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 91 140 1.4E-9 T 25-04-2016 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain SMA_RS07775 531af8fd81b56d9c5ca276144a4a1dd7 418 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 41 85 3.7E-11 T 25-04-2016 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger SMA_RS07775 531af8fd81b56d9c5ca276144a4a1dd7 418 PANTHER PTHR33498:SF1 1 414 1.1E-154 T 25-04-2016 SMA_RS04820 531af8fd81b56d9c5ca276144a4a1dd7 418 PANTHER PTHR33498 1 414 1.1E-154 T 25-04-2016 SMA_RS04820 531af8fd81b56d9c5ca276144a4a1dd7 418 Pfam PF01610 Transposase 157 400 1.5E-55 T 25-04-2016 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain SMA_RS04820 531af8fd81b56d9c5ca276144a4a1dd7 418 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 91 140 1.4E-9 T 25-04-2016 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain SMA_RS04820 531af8fd81b56d9c5ca276144a4a1dd7 418 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 41 85 3.7E-11 T 25-04-2016 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger SMA_RS04820 531af8fd81b56d9c5ca276144a4a1dd7 418 PANTHER PTHR33498:SF1 1 414 1.1E-154 T 25-04-2016 SMA_RS08680 531af8fd81b56d9c5ca276144a4a1dd7 418 PANTHER PTHR33498 1 414 1.1E-154 T 25-04-2016 SMA_RS08680 531af8fd81b56d9c5ca276144a4a1dd7 418 Pfam PF01610 Transposase 157 400 1.5E-55 T 25-04-2016 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain SMA_RS08680 531af8fd81b56d9c5ca276144a4a1dd7 418 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 91 140 1.4E-9 T 25-04-2016 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain SMA_RS08680 531af8fd81b56d9c5ca276144a4a1dd7 418 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 41 85 3.7E-11 T 25-04-2016 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger SMA_RS08680 531af8fd81b56d9c5ca276144a4a1dd7 418 PANTHER PTHR33498:SF1 1 414 1.1E-154 T 25-04-2016 SMA_RS07690 531af8fd81b56d9c5ca276144a4a1dd7 418 PANTHER PTHR33498 1 414 1.1E-154 T 25-04-2016 SMA_RS07690 531af8fd81b56d9c5ca276144a4a1dd7 418 Pfam PF01610 Transposase 157 400 1.5E-55 T 25-04-2016 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain SMA_RS07690 531af8fd81b56d9c5ca276144a4a1dd7 418 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 91 140 1.4E-9 T 25-04-2016 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain SMA_RS07690 531af8fd81b56d9c5ca276144a4a1dd7 418 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 41 85 3.7E-11 T 25-04-2016 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger SMA_RS07690 531af8fd81b56d9c5ca276144a4a1dd7 418 PANTHER PTHR33498:SF1 1 414 1.1E-154 T 25-04-2016 SMA_RS02080 77c9cbce8f2e0c5b5f05e58f7b3e1915 288 PANTHER PTHR22855 21 284 6.9E-138 T 25-04-2016 SMA_RS02080 77c9cbce8f2e0c5b5f05e58f7b3e1915 288 SUPERFAMILY SSF52096 34 284 7.3E-76 T 25-04-2016 IPR029045 ClpP/crotonase-like domain SMA_RS02080 77c9cbce8f2e0c5b5f05e58f7b3e1915 288 PANTHER PTHR22855:SF17 21 284 6.9E-138 T 25-04-2016 SMA_RS02080 77c9cbce8f2e0c5b5f05e58f7b3e1915 288 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 205 222 4.4E-36 T 25-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 SMA_RS02080 77c9cbce8f2e0c5b5f05e58f7b3e1915 288 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 168 186 4.4E-36 T 25-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 SMA_RS02080 77c9cbce8f2e0c5b5f05e58f7b3e1915 288 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 134 148 4.4E-36 T 25-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 SMA_RS02080 77c9cbce8f2e0c5b5f05e58f7b3e1915 288 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 234 245 4.4E-36 T 25-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 SMA_RS02080 77c9cbce8f2e0c5b5f05e58f7b3e1915 288 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 256 265 4.4E-36 T 25-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 SMA_RS02080 77c9cbce8f2e0c5b5f05e58f7b3e1915 288 Gene3D G3DSA:3.90.226.10 29 284 1.2E-71 T 25-04-2016 IPR029045 ClpP/crotonase-like domain SMA_RS02080 77c9cbce8f2e0c5b5f05e58f7b3e1915 288 Pfam PF01039 Carboxyl transferase domain 67 246 3.7E-19 T 25-04-2016 IPR000022 Carboxyl transferase KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 SMA_RS02080 77c9cbce8f2e0c5b5f05e58f7b3e1915 288 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 20 284 8.0E-109 T 25-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 SMA_RS02080 77c9cbce8f2e0c5b5f05e58f7b3e1915 288 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 1 286 39.162 T 25-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 SMA_RS04150 b1aab20d5dc5b49337f45228f4e99582 260 Pfam PF01661 Macro domain 101 210 4.7E-24 T 25-04-2016 IPR002589 Macro domain SMA_RS04150 b1aab20d5dc5b49337f45228f4e99582 260 PANTHER PTHR11106 82 260 1.0E-53 T 25-04-2016 SMA_RS04150 b1aab20d5dc5b49337f45228f4e99582 260 SUPERFAMILY SSF52949 79 259 1.16E-43 T 25-04-2016 SMA_RS04150 b1aab20d5dc5b49337f45228f4e99582 260 SMART SM00506 84 226 2.2E-12 T 25-04-2016 IPR002589 Macro domain SMA_RS04150 b1aab20d5dc5b49337f45228f4e99582 260 Gene3D G3DSA:3.40.220.10 82 260 1.7E-48 T 25-04-2016 SMA_RS04575 3679f1ec5f076482e3572da6fd62545c 1035 PANTHER PTHR32294:SF0 1 1035 0.0 T 25-04-2016 SMA_RS04575 3679f1ec5f076482e3572da6fd62545c 1035 PANTHER PTHR32294 1 1035 0.0 T 25-04-2016 SMA_RS04575 3679f1ec5f076482e3572da6fd62545c 1035 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 242 658 3.3E-157 T 25-04-2016 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SMA_RS04575 3679f1ec5f076482e3572da6fd62545c 1035 Gene3D G3DSA:3.20.20.140 9 89 7.0E-7 T 25-04-2016 SMA_RS04575 3679f1ec5f076482e3572da6fd62545c 1035 SMART SM00481 3 70 2.1E-7 T 25-04-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 SMA_RS04575 3679f1ec5f076482e3572da6fd62545c 1035 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 155 926 1.3E-207 T 25-04-2016 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SMA_RS04575 3679f1ec5f076482e3572da6fd62545c 1035 Pfam PF02811 PHP domain 7 111 4.9E-18 T 25-04-2016 IPR004013 PHP domain GO:0003824 SMA_RS04575 3679f1ec5f076482e3572da6fd62545c 1035 Gene3D G3DSA:2.40.50.140 876 967 6.6E-9 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMA_RS04575 3679f1ec5f076482e3572da6fd62545c 1035 Pfam PF01336 OB-fold nucleic acid binding domain 898 964 7.9E-9 T 25-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 SMA_RS04575 3679f1ec5f076482e3572da6fd62545c 1035 SUPERFAMILY SSF89550 9 84 1.96E-5 T 25-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 SMA_RS04575 3679f1ec5f076482e3572da6fd62545c 1035 Pfam PF14579 Helix-hairpin-helix motif 729 811 2.1E-11 T 25-04-2016 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SMA_RS04725 461cc5ed000cc47eb3185fde35ba3610 226 Pfam PF04002 RadC-like JAB domain 106 222 5.6E-40 T 25-04-2016 IPR025657 RadC-like JAB domain SMA_RS04725 461cc5ed000cc47eb3185fde35ba3610 226 PANTHER PTHR30471:SF3 1 225 2.3E-91 T 25-04-2016 SMA_RS04725 461cc5ed000cc47eb3185fde35ba3610 226 PANTHER PTHR30471 1 225 2.3E-91 T 25-04-2016 SMA_RS04725 461cc5ed000cc47eb3185fde35ba3610 226 SUPERFAMILY SSF102712 158 195 3.4E-5 T 25-04-2016 SMA_RS04725 461cc5ed000cc47eb3185fde35ba3610 226 TIGRFAM TIGR00608 radc: DNA repair protein RadC 13 224 4.1E-70 T 25-04-2016 IPR001405 RadC protein SMA_RS04725 461cc5ed000cc47eb3185fde35ba3610 226 SUPERFAMILY SSF47781 19 89 8.34E-5 T 25-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 SMA_RS04725 461cc5ed000cc47eb3185fde35ba3610 226 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 174 179 - T 25-04-2016 IPR020891 Uncharacterised protein family UPF0758, conserved site SMA_RS04725 461cc5ed000cc47eb3185fde35ba3610 226 Gene3D G3DSA:3.40.140.10 101 222 8.0E-44 T 25-04-2016 SMA_RS07135 56c195e4b7450daf7934610dc1b8fd50 418 PANTHER PTHR33498:SF1 1 414 9.0E-110 T 25-04-2016 SMA_RS07135 56c195e4b7450daf7934610dc1b8fd50 418 PANTHER PTHR33498 1 414 9.0E-110 T 25-04-2016 SMA_RS07135 56c195e4b7450daf7934610dc1b8fd50 418 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 40 85 2.8E-10 T 25-04-2016 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger SMA_RS07135 56c195e4b7450daf7934610dc1b8fd50 418 Pfam PF01610 Transposase 154 400 1.1E-51 T 25-04-2016 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain SMA_RS07135 56c195e4b7450daf7934610dc1b8fd50 418 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 92 141 9.9E-11 T 25-04-2016 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain SMA_RS05435 56c195e4b7450daf7934610dc1b8fd50 418 PANTHER PTHR33498:SF1 1 414 9.0E-110 T 25-04-2016 SMA_RS05435 56c195e4b7450daf7934610dc1b8fd50 418 PANTHER PTHR33498 1 414 9.0E-110 T 25-04-2016 SMA_RS05435 56c195e4b7450daf7934610dc1b8fd50 418 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 40 85 2.8E-10 T 25-04-2016 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger SMA_RS05435 56c195e4b7450daf7934610dc1b8fd50 418 Pfam PF01610 Transposase 154 400 1.1E-51 T 25-04-2016 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain SMA_RS05435 56c195e4b7450daf7934610dc1b8fd50 418 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 92 141 9.9E-11 T 25-04-2016 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain SMA_RS08955 56c195e4b7450daf7934610dc1b8fd50 418 PANTHER PTHR33498:SF1 1 414 9.0E-110 T 25-04-2016 SMA_RS08955 56c195e4b7450daf7934610dc1b8fd50 418 PANTHER PTHR33498 1 414 9.0E-110 T 25-04-2016 SMA_RS08955 56c195e4b7450daf7934610dc1b8fd50 418 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 40 85 2.8E-10 T 25-04-2016 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger SMA_RS08955 56c195e4b7450daf7934610dc1b8fd50 418 Pfam PF01610 Transposase 154 400 1.1E-51 T 25-04-2016 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain SMA_RS08955 56c195e4b7450daf7934610dc1b8fd50 418 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 92 141 9.9E-11 T 25-04-2016 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain SMA_RS02370 56c195e4b7450daf7934610dc1b8fd50 418 PANTHER PTHR33498:SF1 1 414 9.0E-110 T 25-04-2016 SMA_RS02370 56c195e4b7450daf7934610dc1b8fd50 418 PANTHER PTHR33498 1 414 9.0E-110 T 25-04-2016 SMA_RS02370 56c195e4b7450daf7934610dc1b8fd50 418 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 40 85 2.8E-10 T 25-04-2016 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger SMA_RS02370 56c195e4b7450daf7934610dc1b8fd50 418 Pfam PF01610 Transposase 154 400 1.1E-51 T 25-04-2016 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain SMA_RS02370 56c195e4b7450daf7934610dc1b8fd50 418 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 92 141 9.9E-11 T 25-04-2016 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain SMA_RS01670 56c195e4b7450daf7934610dc1b8fd50 418 PANTHER PTHR33498:SF1 1 414 9.0E-110 T 25-04-2016 SMA_RS01670 56c195e4b7450daf7934610dc1b8fd50 418 PANTHER PTHR33498 1 414 9.0E-110 T 25-04-2016 SMA_RS01670 56c195e4b7450daf7934610dc1b8fd50 418 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 40 85 2.8E-10 T 25-04-2016 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger SMA_RS01670 56c195e4b7450daf7934610dc1b8fd50 418 Pfam PF01610 Transposase 154 400 1.1E-51 T 25-04-2016 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain SMA_RS01670 56c195e4b7450daf7934610dc1b8fd50 418 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 92 141 9.9E-11 T 25-04-2016 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain SMA_RS01065 211b664682f43d5455e7883405cc2804 247 PANTHER PTHR30027:SF3 1 247 6.5E-71 T 25-04-2016 SMA_RS01065 211b664682f43d5455e7883405cc2804 247 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 12 246 3.7E-46 T 25-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SMA_RS01065 211b664682f43d5455e7883405cc2804 247 Gene3D G3DSA:3.40.1280.10 1 246 3.4E-67 T 25-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal SMA_RS01065 211b664682f43d5455e7883405cc2804 247 PANTHER PTHR30027 1 247 6.5E-71 T 25-04-2016 SMA_RS01065 211b664682f43d5455e7883405cc2804 247 SUPERFAMILY SSF75217 68 245 7.27E-49 T 25-04-2016 IPR029028 Alpha/beta knot methyltransferases SMA_RS01065 211b664682f43d5455e7883405cc2804 247 PIRSF PIRSF015601 1 246 3.0E-49 T 25-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SMA_RS01065 211b664682f43d5455e7883405cc2804 247 SUPERFAMILY SSF88697 3 61 6.96E-10 T 25-04-2016 IPR015947 PUA-like domain SMA_RS01065 211b664682f43d5455e7883405cc2804 247 Pfam PF04452 RNA methyltransferase 15 241 1.2E-64 T 25-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SMA_RS01300 a426a30b38f5b7c32b0ca61aa4c0d90c 536 PANTHER PTHR10357:SF142 440 517 2.3E-226 T 25-04-2016 SMA_RS01300 a426a30b38f5b7c32b0ca61aa4c0d90c 536 PANTHER PTHR10357:SF142 1 379 2.3E-226 T 25-04-2016 SMA_RS01300 a426a30b38f5b7c32b0ca61aa4c0d90c 536 PANTHER PTHR10357:SF142 395 407 2.3E-226 T 25-04-2016 SMA_RS01300 a426a30b38f5b7c32b0ca61aa4c0d90c 536 Pfam PF00128 Alpha amylase, catalytic domain 28 359 2.0E-121 T 25-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 SMA_RS01300 a426a30b38f5b7c32b0ca61aa4c0d90c 536 SUPERFAMILY SSF51011 465 534 5.4E-11 T 25-04-2016 SMA_RS01300 a426a30b38f5b7c32b0ca61aa4c0d90c 536 Gene3D G3DSA:3.20.20.80 2 104 2.9E-119 T 25-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 SMA_RS01300 a426a30b38f5b7c32b0ca61aa4c0d90c 536 Gene3D G3DSA:3.20.20.80 170 461 2.9E-119 T 25-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 SMA_RS01300 a426a30b38f5b7c32b0ca61aa4c0d90c 536 PANTHER PTHR10357 440 517 2.3E-226 T 25-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 SMA_RS01300 a426a30b38f5b7c32b0ca61aa4c0d90c 536 PANTHER PTHR10357 1 379 2.3E-226 T 25-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 SMA_RS01300 a426a30b38f5b7c32b0ca61aa4c0d90c 536 PANTHER PTHR10357 395 407 2.3E-226 T 25-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 SMA_RS01300 a426a30b38f5b7c32b0ca61aa4c0d90c 536 Gene3D G3DSA:3.90.400.10 105 169 5.7E-29 T 25-04-2016 SMA_RS01300 a426a30b38f5b7c32b0ca61aa4c0d90c 536 SUPERFAMILY SSF51445 3 461 2.54E-145 T 25-04-2016 IPR017853 Glycoside hydrolase superfamily SMA_RS01300 a426a30b38f5b7c32b0ca61aa4c0d90c 536 Gene3D G3DSA:2.60.40.1180 468 534 4.3E-13 T 25-04-2016 IPR013780 Glycosyl hydrolase, all-beta SMA_RS01300 a426a30b38f5b7c32b0ca61aa4c0d90c 536 SMART SM00642 13 402 9.5E-151 T 25-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 SMA_RS01300 a426a30b38f5b7c32b0ca61aa4c0d90c 536 Pfam PF16657 Maltogenic Amylase, C-terminal domain 465 509 2.2E-7 T 25-04-2016 IPR032091 Maltogenic Amylase, C-terminal SMA_RS06385 987340324bd807815938cf0ac2f009af 405 Pfam PF07687 Peptidase dimerisation domain 209 307 4.4E-8 T 25-04-2016 IPR011650 Peptidase M20, dimerisation domain SMA_RS06385 987340324bd807815938cf0ac2f009af 405 Pfam PF01546 Peptidase family M20/M25/M40 141 404 2.6E-10 T 25-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 SMA_RS06385 987340324bd807815938cf0ac2f009af 405 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 140 179 - T 25-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 SMA_RS06385 987340324bd807815938cf0ac2f009af 405 SUPERFAMILY SSF53187 324 404 5.71E-73 T 25-04-2016 SMA_RS06385 987340324bd807815938cf0ac2f009af 405 SUPERFAMILY SSF53187 3 212 5.71E-73 T 25-04-2016 SMA_RS06385 987340324bd807815938cf0ac2f009af 405 PANTHER PTHR11014 133 404 1.8E-167 T 25-04-2016 SMA_RS06385 987340324bd807815938cf0ac2f009af 405 PANTHER PTHR11014 4 93 1.8E-167 T 25-04-2016 SMA_RS06385 987340324bd807815938cf0ac2f009af 405 PANTHER PTHR11014:SF3 133 404 1.8E-167 T 25-04-2016 SMA_RS06385 987340324bd807815938cf0ac2f009af 405 PANTHER PTHR11014:SF3 4 93 1.8E-167 T 25-04-2016 SMA_RS06385 987340324bd807815938cf0ac2f009af 405 Hamap MF_00550 Peptidase T [pepT]. 3 405 56.2 T 25-04-2016 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 SMA_RS06385 987340324bd807815938cf0ac2f009af 405 Gene3D G3DSA:3.30.70.360 212 321 9.3E-46 T 25-04-2016 IPR011650 Peptidase M20, dimerisation domain SMA_RS06385 987340324bd807815938cf0ac2f009af 405 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 76 85 - T 25-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 SMA_RS06385 987340324bd807815938cf0ac2f009af 405 TIGRFAM TIGR01882 peptidase-T: peptidase T 3 404 1.2E-197 T 25-04-2016 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 SMA_RS06385 987340324bd807815938cf0ac2f009af 405 PIRSF PIRSF037215 1 405 1.3E-183 T 25-04-2016 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 SMA_RS06385 987340324bd807815938cf0ac2f009af 405 Gene3D G3DSA:3.40.630.10 324 404 1.1E-111 T 25-04-2016 SMA_RS06385 987340324bd807815938cf0ac2f009af 405 Gene3D G3DSA:3.40.630.10 2 211 1.1E-111 T 25-04-2016 SMA_RS06385 987340324bd807815938cf0ac2f009af 405 SUPERFAMILY SSF55031 211 322 1.57E-40 T 25-04-2016 IPR011650 Peptidase M20, dimerisation domain SMA_RS06635 ec74fd1d6d2494e9dc0a197509563019 265 SUPERFAMILY SSF53098 96 258 5.46E-31 T 25-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMA_RS06635 ec74fd1d6d2494e9dc0a197509563019 265 Gene3D G3DSA:3.30.420.10 95 256 4.5E-23 T 25-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMA_RS06635 ec74fd1d6d2494e9dc0a197509563019 265 PANTHER PTHR32552 1 262 1.7E-67 T 25-04-2016 SMA_RS06635 ec74fd1d6d2494e9dc0a197509563019 265 Pfam PF00665 Integrase core domain 102 216 9.1E-26 T 25-04-2016 IPR001584 Integrase, catalytic core GO:0015074 SMA_RS06635 ec74fd1d6d2494e9dc0a197509563019 265 Pfam PF13276 HTH-like domain 21 77 5.5E-20 T 25-04-2016 IPR025948 HTH-like domain SMA_RS03670 ec74fd1d6d2494e9dc0a197509563019 265 SUPERFAMILY SSF53098 96 258 5.46E-31 T 25-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMA_RS03670 ec74fd1d6d2494e9dc0a197509563019 265 Gene3D G3DSA:3.30.420.10 95 256 4.5E-23 T 25-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMA_RS03670 ec74fd1d6d2494e9dc0a197509563019 265 PANTHER PTHR32552 1 262 1.7E-67 T 25-04-2016 SMA_RS03670 ec74fd1d6d2494e9dc0a197509563019 265 Pfam PF00665 Integrase core domain 102 216 9.1E-26 T 25-04-2016 IPR001584 Integrase, catalytic core GO:0015074 SMA_RS03670 ec74fd1d6d2494e9dc0a197509563019 265 Pfam PF13276 HTH-like domain 21 77 5.5E-20 T 25-04-2016 IPR025948 HTH-like domain SMA_RS07105 ec74fd1d6d2494e9dc0a197509563019 265 SUPERFAMILY SSF53098 96 258 5.46E-31 T 25-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMA_RS07105 ec74fd1d6d2494e9dc0a197509563019 265 Gene3D G3DSA:3.30.420.10 95 256 4.5E-23 T 25-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMA_RS07105 ec74fd1d6d2494e9dc0a197509563019 265 PANTHER PTHR32552 1 262 1.7E-67 T 25-04-2016 SMA_RS07105 ec74fd1d6d2494e9dc0a197509563019 265 Pfam PF00665 Integrase core domain 102 216 9.1E-26 T 25-04-2016 IPR001584 Integrase, catalytic core GO:0015074 SMA_RS07105 ec74fd1d6d2494e9dc0a197509563019 265 Pfam PF13276 HTH-like domain 21 77 5.5E-20 T 25-04-2016 IPR025948 HTH-like domain SMA_RS05550 ec74fd1d6d2494e9dc0a197509563019 265 SUPERFAMILY SSF53098 96 258 5.46E-31 T 25-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMA_RS05550 ec74fd1d6d2494e9dc0a197509563019 265 Gene3D G3DSA:3.30.420.10 95 256 4.5E-23 T 25-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMA_RS05550 ec74fd1d6d2494e9dc0a197509563019 265 PANTHER PTHR32552 1 262 1.7E-67 T 25-04-2016 SMA_RS05550 ec74fd1d6d2494e9dc0a197509563019 265 Pfam PF00665 Integrase core domain 102 216 9.1E-26 T 25-04-2016 IPR001584 Integrase, catalytic core GO:0015074 SMA_RS05550 ec74fd1d6d2494e9dc0a197509563019 265 Pfam PF13276 HTH-like domain 21 77 5.5E-20 T 25-04-2016 IPR025948 HTH-like domain SMA_RS06525 ec74fd1d6d2494e9dc0a197509563019 265 SUPERFAMILY SSF53098 96 258 5.46E-31 T 25-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMA_RS06525 ec74fd1d6d2494e9dc0a197509563019 265 Gene3D G3DSA:3.30.420.10 95 256 4.5E-23 T 25-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMA_RS06525 ec74fd1d6d2494e9dc0a197509563019 265 PANTHER PTHR32552 1 262 1.7E-67 T 25-04-2016 SMA_RS06525 ec74fd1d6d2494e9dc0a197509563019 265 Pfam PF00665 Integrase core domain 102 216 9.1E-26 T 25-04-2016 IPR001584 Integrase, catalytic core GO:0015074 SMA_RS06525 ec74fd1d6d2494e9dc0a197509563019 265 Pfam PF13276 HTH-like domain 21 77 5.5E-20 T 25-04-2016 IPR025948 HTH-like domain SMA_RS07630 f594204670a8b462cc1a2021806aa8cd 228 Gene3D G3DSA:1.10.1520.10 7 151 9.5E-48 T 25-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 SMA_RS07630 f594204670a8b462cc1a2021806aa8cd 228 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 8 225 1.3E-80 T 25-04-2016 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 SMA_RS07630 f594204670a8b462cc1a2021806aa8cd 228 SUPERFAMILY SSF69065 6 163 1.92E-50 T 25-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 SMA_RS07630 f594204670a8b462cc1a2021806aa8cd 228 SMART SM00535 20 155 2.1E-59 T 25-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 SMA_RS07630 f594204670a8b462cc1a2021806aa8cd 228 SMART SM00358 161 228 5.1E-23 T 25-04-2016 IPR014720 Double-stranded RNA-binding domain SMA_RS07630 f594204670a8b462cc1a2021806aa8cd 228 SUPERFAMILY SSF54768 150 228 1.21E-22 T 25-04-2016 SMA_RS07630 f594204670a8b462cc1a2021806aa8cd 228 Pfam PF14622 Ribonuclease-III-like 18 148 2.2E-35 T 25-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 SMA_RS07630 f594204670a8b462cc1a2021806aa8cd 228 ProSitePatterns PS00517 Ribonuclease III family signature. 44 52 - T 25-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 SMA_RS07630 f594204670a8b462cc1a2021806aa8cd 228 PANTHER PTHR11207 7 228 2.3E-85 T 25-04-2016 SMA_RS07630 f594204670a8b462cc1a2021806aa8cd 228 Gene3D G3DSA:3.30.160.20 160 226 1.6E-26 T 25-04-2016 IPR014720 Double-stranded RNA-binding domain SMA_RS07630 f594204670a8b462cc1a2021806aa8cd 228 Hamap MF_00104 Ribonuclease 3 [rnc]. 8 224 31.077 T 25-04-2016 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 SMA_RS07630 f594204670a8b462cc1a2021806aa8cd 228 Pfam PF00035 Double-stranded RNA binding motif 161 227 3.7E-17 T 25-04-2016 IPR014720 Double-stranded RNA-binding domain SMA_RS02870 3fe08201404ed45240bfe484bfe2682f 581 ProSitePatterns PS00211 ABC transporters family signature. 472 486 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SMA_RS02870 3fe08201404ed45240bfe484bfe2682f 581 Pfam PF00005 ABC transporter 351 498 1.4E-31 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMA_RS02870 3fe08201404ed45240bfe484bfe2682f 581 Gene3D G3DSA:3.40.50.300 343 563 6.9E-71 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS02870 3fe08201404ed45240bfe484bfe2682f 581 PANTHER PTHR24221:SF202 1 579 2.5E-210 T 25-04-2016 SMA_RS02870 3fe08201404ed45240bfe484bfe2682f 581 Pfam PF00664 ABC transporter transmembrane region 19 291 2.9E-37 T 25-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SMA_RS02870 3fe08201404ed45240bfe484bfe2682f 581 SMART SM00382 360 561 1.7E-14 T 25-04-2016 IPR003593 AAA+ ATPase domain SMA_RS02870 3fe08201404ed45240bfe484bfe2682f 581 SUPERFAMILY SSF52540 330 571 9.1E-82 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS02870 3fe08201404ed45240bfe484bfe2682f 581 PANTHER PTHR24221 1 579 2.5E-210 T 25-04-2016 SMA_RS02870 3fe08201404ed45240bfe484bfe2682f 581 SUPERFAMILY SSF90123 5 320 2.75E-76 T 25-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SMA_RS02870 3fe08201404ed45240bfe484bfe2682f 581 Gene3D G3DSA:1.20.1560.10 5 318 2.2E-70 T 25-04-2016 SMA_RS08210 35019afd6b113cf85bc774254f986fdf 443 Pfam PF01595 Domain of unknown function DUF21 13 199 7.7E-46 T 25-04-2016 IPR002550 Domain of unknown function DUF21 SMA_RS08210 35019afd6b113cf85bc774254f986fdf 443 Pfam PF03471 Transporter associated domain 352 431 4.4E-15 T 25-04-2016 IPR005170 Transporter-associated domain SMA_RS08210 35019afd6b113cf85bc774254f986fdf 443 SUPERFAMILY SSF54631 210 353 6.19E-31 T 25-04-2016 SMA_RS08210 35019afd6b113cf85bc774254f986fdf 443 PANTHER PTHR22777 5 443 6.8E-180 T 25-04-2016 SMA_RS08210 35019afd6b113cf85bc774254f986fdf 443 SMART SM01091 351 435 7.7E-14 T 25-04-2016 IPR005170 Transporter-associated domain SMA_RS08210 35019afd6b113cf85bc774254f986fdf 443 SUPERFAMILY SSF56176 352 432 3.0E-17 T 25-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 SMA_RS08210 35019afd6b113cf85bc774254f986fdf 443 Gene3D G3DSA:3.10.580.10 202 347 3.3E-17 T 25-04-2016 SMA_RS08210 35019afd6b113cf85bc774254f986fdf 443 Gene3D G3DSA:3.30.465.10 350 432 5.2E-23 T 25-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 SMA_RS08210 35019afd6b113cf85bc774254f986fdf 443 PANTHER PTHR22777:SF8 5 443 6.8E-180 T 25-04-2016 SMA_RS08210 35019afd6b113cf85bc774254f986fdf 443 Pfam PF00571 CBS domain 288 336 1.2E-6 T 25-04-2016 IPR000644 CBS domain SMA_RS08210 35019afd6b113cf85bc774254f986fdf 443 Pfam PF00571 CBS domain 217 270 3.6E-4 T 25-04-2016 IPR000644 CBS domain SMA_RS05400 024d7821c40bd70cbcf4c0ce5576e4d1 451 Gene3D G3DSA:1.20.120.520 311 334 4.3E-67 T 25-04-2016 SMA_RS05400 024d7821c40bd70cbcf4c0ce5576e4d1 451 Gene3D G3DSA:1.20.120.520 82 263 4.3E-67 T 25-04-2016 SMA_RS05400 024d7821c40bd70cbcf4c0ce5576e4d1 451 Pfam PF13596 PAS domain 329 438 2.0E-26 T 25-04-2016 SMA_RS05400 024d7821c40bd70cbcf4c0ce5576e4d1 451 Pfam PF04282 Family of unknown function (DUF438) 9 76 3.8E-22 T 25-04-2016 IPR007380 Domain of unknown function DUF438 SMA_RS05400 024d7821c40bd70cbcf4c0ce5576e4d1 451 PANTHER PTHR24423:SF516 1 211 3.4E-50 T 25-04-2016 SMA_RS05400 024d7821c40bd70cbcf4c0ce5576e4d1 451 PANTHER PTHR24423:SF516 324 440 3.4E-50 T 25-04-2016 SMA_RS05400 024d7821c40bd70cbcf4c0ce5576e4d1 451 PANTHER PTHR24423 1 211 3.4E-50 T 25-04-2016 SMA_RS05400 024d7821c40bd70cbcf4c0ce5576e4d1 451 PANTHER PTHR24423 324 440 3.4E-50 T 25-04-2016 SMA_RS05400 024d7821c40bd70cbcf4c0ce5576e4d1 451 SUPERFAMILY SSF55785 324 432 7.33E-6 T 25-04-2016 IPR000014 PAS domain SMA_RS05400 024d7821c40bd70cbcf4c0ce5576e4d1 451 Gene3D G3DSA:3.30.450.20 335 432 5.4E-8 T 25-04-2016 SMA_RS05400 024d7821c40bd70cbcf4c0ce5576e4d1 451 Pfam PF01814 Hemerythrin HHE cation binding domain 88 222 4.7E-20 T 25-04-2016 IPR012312 Haemerythrin-like SMA_RS04390 670d56a0ca3d18ac43e4d9d37136aaa9 371 Pfam PF13450 NAD(P)-binding Rossmann-like domain 8 74 1.3E-18 T 25-04-2016 SMA_RS04390 670d56a0ca3d18ac43e4d9d37136aaa9 371 TIGRFAM TIGR00031 UDP-GALP_mutase: UDP-galactopyranose mutase 4 367 4.7E-132 T 25-04-2016 IPR004379 UDP-galactopyranose mutase GO:0008767 KEGG: 00052+5.4.99.9|KEGG: 00520+5.4.99.9|MetaCyc: PWY-6397|MetaCyc: PWY-7328|MetaCyc: PWY-7622 SMA_RS04390 670d56a0ca3d18ac43e4d9d37136aaa9 371 SUPERFAMILY SSF51971 3 267 4.41E-52 T 25-04-2016 SMA_RS04390 670d56a0ca3d18ac43e4d9d37136aaa9 371 SUPERFAMILY SSF51971 335 365 4.41E-52 T 25-04-2016 SMA_RS04390 670d56a0ca3d18ac43e4d9d37136aaa9 371 SUPERFAMILY SSF54373 249 317 1.35E-25 T 25-04-2016 SMA_RS04390 670d56a0ca3d18ac43e4d9d37136aaa9 371 Pfam PF03275 UDP-galactopyranose mutase 148 350 1.3E-87 T 25-04-2016 IPR015899 UDP-galactopyranose mutase, C-terminal GO:0008767 KEGG: 00052+5.4.99.9|KEGG: 00520+5.4.99.9|MetaCyc: PWY-6397|MetaCyc: PWY-7328|MetaCyc: PWY-7622 SMA_RS04390 670d56a0ca3d18ac43e4d9d37136aaa9 371 PANTHER PTHR21197 1 362 5.5E-107 T 25-04-2016 IPR004379 UDP-galactopyranose mutase GO:0008767 KEGG: 00052+5.4.99.9|KEGG: 00520+5.4.99.9|MetaCyc: PWY-6397|MetaCyc: PWY-7328|MetaCyc: PWY-7622 SMA_RS04390 670d56a0ca3d18ac43e4d9d37136aaa9 371 Gene3D G3DSA:3.40.50.720 183 258 2.1E-47 T 25-04-2016 IPR016040 NAD(P)-binding domain SMA_RS04390 670d56a0ca3d18ac43e4d9d37136aaa9 371 Gene3D G3DSA:3.40.50.720 2 80 2.1E-47 T 25-04-2016 IPR016040 NAD(P)-binding domain SMA_RS04390 670d56a0ca3d18ac43e4d9d37136aaa9 371 Gene3D G3DSA:3.40.50.720 325 367 2.1E-47 T 25-04-2016 IPR016040 NAD(P)-binding domain SMA_RS08655 e6f3d176d96ac6af364010bb27ec6c49 138 PANTHER PTHR33164 1 136 3.6E-20 T 25-04-2016 SMA_RS08655 e6f3d176d96ac6af364010bb27ec6c49 138 Pfam PF12802 MarR family 28 88 1.9E-7 T 25-04-2016 SMA_RS08655 e6f3d176d96ac6af364010bb27ec6c49 138 Gene3D G3DSA:1.10.10.10 2 132 3.3E-39 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMA_RS08655 e6f3d176d96ac6af364010bb27ec6c49 138 SUPERFAMILY SSF46785 4 132 2.64E-28 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMA_RS08655 e6f3d176d96ac6af364010bb27ec6c49 138 SMART SM00347 22 124 1.1E-14 T 25-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SMA_RS08655 e6f3d176d96ac6af364010bb27ec6c49 138 PRINTS PR00598 Bacterial regulatory protein MarR family signature 114 134 7.6E-8 T 25-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SMA_RS08655 e6f3d176d96ac6af364010bb27ec6c49 138 PRINTS PR00598 Bacterial regulatory protein MarR family signature 65 80 7.6E-8 T 25-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SMA_RS08655 e6f3d176d96ac6af364010bb27ec6c49 138 PRINTS PR00598 Bacterial regulatory protein MarR family signature 84 100 7.6E-8 T 25-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SMA_RS08655 e6f3d176d96ac6af364010bb27ec6c49 138 PRINTS PR00598 Bacterial regulatory protein MarR family signature 48 64 7.6E-8 T 25-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SMA_RS04505 013ddadfb88f6a3f20d0de74ea56711b 649 Pfam PF00204 DNA gyrase B 229 399 3.6E-57 T 25-04-2016 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 SMA_RS04505 013ddadfb88f6a3f20d0de74ea56711b 649 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 575 636 1.7E-29 T 25-04-2016 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 SMA_RS04505 013ddadfb88f6a3f20d0de74ea56711b 649 Gene3D G3DSA:3.30.565.10 11 221 8.7E-87 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMA_RS04505 013ddadfb88f6a3f20d0de74ea56711b 649 SMART SM00433 40 640 0.0 T 25-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SMA_RS04505 013ddadfb88f6a3f20d0de74ea56711b 649 PRINTS PR00418 DNA topoisomerase II family signature 75 88 4.9E-70 T 25-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SMA_RS04505 013ddadfb88f6a3f20d0de74ea56711b 649 PRINTS PR00418 DNA topoisomerase II family signature 497 513 4.9E-70 T 25-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SMA_RS04505 013ddadfb88f6a3f20d0de74ea56711b 649 PRINTS PR00418 DNA topoisomerase II family signature 40 55 4.9E-70 T 25-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SMA_RS04505 013ddadfb88f6a3f20d0de74ea56711b 649 PRINTS PR00418 DNA topoisomerase II family signature 579 595 4.9E-70 T 25-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SMA_RS04505 013ddadfb88f6a3f20d0de74ea56711b 649 PRINTS PR00418 DNA topoisomerase II family signature 535 547 4.9E-70 T 25-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SMA_RS04505 013ddadfb88f6a3f20d0de74ea56711b 649 PRINTS PR00418 DNA topoisomerase II family signature 515 532 4.9E-70 T 25-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SMA_RS04505 013ddadfb88f6a3f20d0de74ea56711b 649 PRINTS PR00418 DNA topoisomerase II family signature 275 288 4.9E-70 T 25-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SMA_RS04505 013ddadfb88f6a3f20d0de74ea56711b 649 PRINTS PR00418 DNA topoisomerase II family signature 117 131 4.9E-70 T 25-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SMA_RS04505 013ddadfb88f6a3f20d0de74ea56711b 649 PRINTS PR00418 DNA topoisomerase II family signature 431 445 4.9E-70 T 25-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SMA_RS04505 013ddadfb88f6a3f20d0de74ea56711b 649 ProSitePatterns PS00177 DNA topoisomerase II signature. 433 441 - T 25-04-2016 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 SMA_RS04505 013ddadfb88f6a3f20d0de74ea56711b 649 SUPERFAMILY SSF56719 405 646 4.97E-88 T 25-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 SMA_RS04505 013ddadfb88f6a3f20d0de74ea56711b 649 TIGRFAM TIGR01058 parE_Gpos: DNA topoisomerase IV, B subunit 9 648 0.0 T 25-04-2016 IPR005740 DNA topoisomerase 4 subunit B, Firmicutes/Mollicutes GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 SMA_RS04505 013ddadfb88f6a3f20d0de74ea56711b 649 SUPERFAMILY SSF55874 10 221 7.73E-68 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMA_RS04505 013ddadfb88f6a3f20d0de74ea56711b 649 SUPERFAMILY SSF54211 229 399 2.47E-53 T 25-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SMA_RS04505 013ddadfb88f6a3f20d0de74ea56711b 649 SMART SM00387 36 182 4.1E-24 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMA_RS04505 013ddadfb88f6a3f20d0de74ea56711b 649 PANTHER PTHR10169 9 639 0.0 T 25-04-2016 SMA_RS04505 013ddadfb88f6a3f20d0de74ea56711b 649 PRINTS PR01159 DNA gyrase subunit B signature 369 383 3.9E-53 T 25-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SMA_RS04505 013ddadfb88f6a3f20d0de74ea56711b 649 PRINTS PR01159 DNA gyrase subunit B signature 383 403 3.9E-53 T 25-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SMA_RS04505 013ddadfb88f6a3f20d0de74ea56711b 649 PRINTS PR01159 DNA gyrase subunit B signature 11 21 3.9E-53 T 25-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SMA_RS04505 013ddadfb88f6a3f20d0de74ea56711b 649 PRINTS PR01159 DNA gyrase subunit B signature 187 202 3.9E-53 T 25-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SMA_RS04505 013ddadfb88f6a3f20d0de74ea56711b 649 PRINTS PR01159 DNA gyrase subunit B signature 228 250 3.9E-53 T 25-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SMA_RS04505 013ddadfb88f6a3f20d0de74ea56711b 649 PRINTS PR01159 DNA gyrase subunit B signature 319 335 3.9E-53 T 25-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SMA_RS04505 013ddadfb88f6a3f20d0de74ea56711b 649 PRINTS PR01159 DNA gyrase subunit B signature 616 632 3.9E-53 T 25-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SMA_RS04505 013ddadfb88f6a3f20d0de74ea56711b 649 PRINTS PR01159 DNA gyrase subunit B signature 202 215 3.9E-53 T 25-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SMA_RS04505 013ddadfb88f6a3f20d0de74ea56711b 649 PRINTS PR01159 DNA gyrase subunit B signature 600 612 3.9E-53 T 25-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SMA_RS04505 013ddadfb88f6a3f20d0de74ea56711b 649 PRINTS PR01159 DNA gyrase subunit B signature 481 490 3.9E-53 T 25-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SMA_RS04505 013ddadfb88f6a3f20d0de74ea56711b 649 Gene3D G3DSA:3.30.230.10 228 399 7.9E-64 T 25-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SMA_RS04505 013ddadfb88f6a3f20d0de74ea56711b 649 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 37 181 1.1E-21 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMA_RS04505 013ddadfb88f6a3f20d0de74ea56711b 649 PANTHER PTHR10169:SF44 9 639 0.0 T 25-04-2016 SMA_RS04505 013ddadfb88f6a3f20d0de74ea56711b 649 Hamap MF_00939 DNA topoisomerase 4 subunit B [parE]. 9 645 50.344 T 25-04-2016 IPR005740 DNA topoisomerase 4 subunit B, Firmicutes/Mollicutes GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 SMA_RS04505 013ddadfb88f6a3f20d0de74ea56711b 649 Pfam PF01751 Toprim domain 430 540 3.2E-18 T 25-04-2016 IPR006171 Toprim domain SMA_RS04505 013ddadfb88f6a3f20d0de74ea56711b 649 Gene3D G3DSA:3.40.50.670 416 629 6.1E-88 T 25-04-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 SMA_RS02140 64641bea91b250ca820c827df37d958c 170 Pfam PF00583 Acetyltransferase (GNAT) family 65 143 1.9E-15 T 25-04-2016 IPR000182 GNAT domain GO:0008080 SMA_RS02140 64641bea91b250ca820c827df37d958c 170 Gene3D G3DSA:3.40.630.30 4 168 1.5E-37 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMA_RS02140 64641bea91b250ca820c827df37d958c 170 PANTHER PTHR23091 5 170 8.5E-20 T 25-04-2016 SMA_RS02140 64641bea91b250ca820c827df37d958c 170 SUPERFAMILY SSF55729 5 169 3.43E-30 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMA_RS04885 20f2d931b5b174e8c46ce007c8df88b8 574 Gene3D G3DSA:3.40.50.300 330 562 2.3E-61 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS04885 20f2d931b5b174e8c46ce007c8df88b8 574 PANTHER PTHR24221:SF190 1 574 3.4E-142 T 25-04-2016 SMA_RS04885 20f2d931b5b174e8c46ce007c8df88b8 574 SMART SM00382 356 543 1.7E-11 T 25-04-2016 IPR003593 AAA+ ATPase domain SMA_RS04885 20f2d931b5b174e8c46ce007c8df88b8 574 ProSitePatterns PS00211 ABC transporters family signature. 469 483 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SMA_RS04885 20f2d931b5b174e8c46ce007c8df88b8 574 SUPERFAMILY SSF90123 2 315 5.23E-64 T 25-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SMA_RS04885 20f2d931b5b174e8c46ce007c8df88b8 574 Gene3D G3DSA:1.20.1560.10 2 313 8.1E-60 T 25-04-2016 SMA_RS04885 20f2d931b5b174e8c46ce007c8df88b8 574 Pfam PF00664 ABC transporter transmembrane region 16 284 1.7E-44 T 25-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SMA_RS04885 20f2d931b5b174e8c46ce007c8df88b8 574 Pfam PF00005 ABC transporter 347 497 2.3E-28 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMA_RS04885 20f2d931b5b174e8c46ce007c8df88b8 574 PANTHER PTHR24221 1 574 3.4E-142 T 25-04-2016 SMA_RS04885 20f2d931b5b174e8c46ce007c8df88b8 574 SUPERFAMILY SSF52540 328 567 5.74E-69 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS07570 7ec2438936b5b009a3ca2712a0e0f08d 710 SMART SM00316 633 704 6.6E-25 T 25-04-2016 IPR022967 RNA-binding domain, S1 SMA_RS07570 7ec2438936b5b009a3ca2712a0e0f08d 710 Gene3D G3DSA:1.10.10.650 2 109 7.6E-40 T 25-04-2016 IPR023319 Tex-like protein, HTH domain SMA_RS07570 7ec2438936b5b009a3ca2712a0e0f08d 710 Pfam PF16921 Tex protein YqgF-like domain 309 435 1.4E-52 T 25-04-2016 IPR032639 Tex protein, YqgF-like domain SMA_RS07570 7ec2438936b5b009a3ca2712a0e0f08d 710 SUPERFAMILY SSF47781 454 542 8.78E-26 T 25-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 SMA_RS07570 7ec2438936b5b009a3ca2712a0e0f08d 710 PANTHER PTHR10724 1 708 0.0 T 25-04-2016 SMA_RS07570 7ec2438936b5b009a3ca2712a0e0f08d 710 SUPERFAMILY SSF50249 620 706 4.55E-24 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMA_RS07570 7ec2438936b5b009a3ca2712a0e0f08d 710 Pfam PF12836 Helix-hairpin-helix motif 475 539 6.3E-27 T 25-04-2016 SMA_RS07570 7ec2438936b5b009a3ca2712a0e0f08d 710 Gene3D G3DSA:3.30.420.140 309 434 5.5E-49 T 25-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 SMA_RS07570 7ec2438936b5b009a3ca2712a0e0f08d 710 SUPERFAMILY SSF158832 4 303 3.4E-99 T 25-04-2016 SMA_RS07570 7ec2438936b5b009a3ca2712a0e0f08d 710 SMART SM00732 309 408 6.2E-35 T 25-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 SMA_RS07570 7ec2438936b5b009a3ca2712a0e0f08d 710 SUPERFAMILY SSF47781 544 616 4.89E-17 T 25-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 SMA_RS07570 7ec2438936b5b009a3ca2712a0e0f08d 710 Pfam PF00575 S1 RNA binding domain 632 703 8.9E-18 T 25-04-2016 IPR003029 S1 domain GO:0003676 SMA_RS07570 7ec2438936b5b009a3ca2712a0e0f08d 710 Pfam PF09371 Tex-like protein N-terminal domain 9 189 9.8E-63 T 25-04-2016 IPR018974 Tex-like protein, N-terminal SMA_RS07570 7ec2438936b5b009a3ca2712a0e0f08d 710 PANTHER PTHR10724:SF1 1 708 0.0 T 25-04-2016 SMA_RS07570 7ec2438936b5b009a3ca2712a0e0f08d 710 SUPERFAMILY SSF53098 305 453 1.87E-47 T 25-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMA_RS07570 7ec2438936b5b009a3ca2712a0e0f08d 710 Gene3D G3DSA:2.40.50.140 618 705 1.8E-27 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMA_RS07570 7ec2438936b5b009a3ca2712a0e0f08d 710 Gene3D G3DSA:1.10.150.310 483 614 2.0E-44 T 25-04-2016 IPR023097 Tex RuvX-like domain SMA_RS07570 7ec2438936b5b009a3ca2712a0e0f08d 710 Gene3D G3DSA:1.10.3500.10 435 482 1.4E-83 T 25-04-2016 IPR023323 Tex-like domain SMA_RS07570 7ec2438936b5b009a3ca2712a0e0f08d 710 Gene3D G3DSA:1.10.3500.10 110 305 1.4E-83 T 25-04-2016 IPR023323 Tex-like domain SMA_RS02170 062f6570047ae890404cb786296f2093 264 Gene3D G3DSA:3.90.1200.10 43 223 6.9E-14 T 25-04-2016 SMA_RS02170 062f6570047ae890404cb786296f2093 264 Pfam PF01636 Phosphotransferase enzyme family 41 214 5.6E-16 T 25-04-2016 IPR002575 Aminoglycoside phosphotransferase SMA_RS02170 062f6570047ae890404cb786296f2093 264 PANTHER PTHR40086 5 262 5.1E-57 T 25-04-2016 SMA_RS02170 062f6570047ae890404cb786296f2093 264 SUPERFAMILY SSF56112 11 216 4.18E-33 T 25-04-2016 IPR011009 Protein kinase-like domain SMA_RS07845 9af217495c154a685a16e892918dbc52 71 SUPERFAMILY SSF140652 2 71 1.29E-27 T 25-04-2016 IPR023089 YozE SAM-like domain SMA_RS07845 9af217495c154a685a16e892918dbc52 71 Hamap MF_01538 UPF0346 protein . 1 71 22.587 T 25-04-2016 IPR010673 Protein of unknown function UPF0346 SMA_RS07845 9af217495c154a685a16e892918dbc52 71 PANTHER PTHR41284:SF1 2 71 1.3E-24 T 25-04-2016 SMA_RS07845 9af217495c154a685a16e892918dbc52 71 Pfam PF06855 YozE SAM-like fold 4 69 7.4E-24 T 25-04-2016 IPR023089 YozE SAM-like domain SMA_RS07845 9af217495c154a685a16e892918dbc52 71 PANTHER PTHR41284 2 71 1.3E-24 T 25-04-2016 SMA_RS07845 9af217495c154a685a16e892918dbc52 71 Gene3D G3DSA:1.10.150.260 2 71 6.6E-29 T 25-04-2016 IPR023089 YozE SAM-like domain SMA_RS07845 9af217495c154a685a16e892918dbc52 71 PIRSF PIRSF037262 1 71 1.5E-30 T 25-04-2016 IPR010673 Protein of unknown function UPF0346 SMA_RS10065 3b9f883ebc4be6a2c5f1a4c599df9466 255 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 2 225 43.53 T 25-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 SMA_RS10065 3b9f883ebc4be6a2c5f1a4c599df9466 255 Pfam PF00318 Ribosomal protein S2 9 224 3.1E-99 T 25-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS10065 3b9f883ebc4be6a2c5f1a4c599df9466 255 Gene3D G3DSA:3.40.50.10490 158 245 1.2E-69 T 25-04-2016 SMA_RS10065 3b9f883ebc4be6a2c5f1a4c599df9466 255 Gene3D G3DSA:3.40.50.10490 23 99 1.2E-69 T 25-04-2016 SMA_RS10065 3b9f883ebc4be6a2c5f1a4c599df9466 255 PANTHER PTHR12534 1 226 4.2E-123 T 25-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 SMA_RS10065 3b9f883ebc4be6a2c5f1a4c599df9466 255 SUPERFAMILY SSF52313 6 232 1.44E-97 T 25-04-2016 IPR023591 Ribosomal protein S2, flavodoxin-like domain SMA_RS10065 3b9f883ebc4be6a2c5f1a4c599df9466 255 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 6 17 - T 25-04-2016 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 SMA_RS10065 3b9f883ebc4be6a2c5f1a4c599df9466 255 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 3 226 3.3E-107 T 25-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 SMA_RS10065 3b9f883ebc4be6a2c5f1a4c599df9466 255 Gene3D G3DSA:1.10.287.610 100 152 3.7E-26 T 25-04-2016 SMA_RS10065 3b9f883ebc4be6a2c5f1a4c599df9466 255 PRINTS PR00395 Ribosomal protein S2 signature 87 104 3.2E-42 T 25-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS10065 3b9f883ebc4be6a2c5f1a4c599df9466 255 PRINTS PR00395 Ribosomal protein S2 signature 196 210 3.2E-42 T 25-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS10065 3b9f883ebc4be6a2c5f1a4c599df9466 255 PRINTS PR00395 Ribosomal protein S2 signature 158 175 3.2E-42 T 25-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS10065 3b9f883ebc4be6a2c5f1a4c599df9466 255 PRINTS PR00395 Ribosomal protein S2 signature 37 46 3.2E-42 T 25-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS10065 3b9f883ebc4be6a2c5f1a4c599df9466 255 PRINTS PR00395 Ribosomal protein S2 signature 6 24 3.2E-42 T 25-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS10065 3b9f883ebc4be6a2c5f1a4c599df9466 255 PRINTS PR00395 Ribosomal protein S2 signature 175 186 3.2E-42 T 25-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS03340 a795c2754d4fa58d6345c117cb58cb7a 238 SUPERFAMILY SSF55120 61 230 1.64E-38 T 25-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 SMA_RS03340 a795c2754d4fa58d6345c117cb58cb7a 238 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 66 226 6.3E-42 T 25-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 SMA_RS03340 a795c2754d4fa58d6345c117cb58cb7a 238 Pfam PF00849 RNA pseudouridylate synthase 62 195 1.2E-16 T 25-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 SMA_RS03340 a795c2754d4fa58d6345c117cb58cb7a 238 Gene3D G3DSA:3.10.290.10 1 64 2.6E-16 T 25-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SMA_RS03340 a795c2754d4fa58d6345c117cb58cb7a 238 Pfam PF01479 S4 domain 1 42 2.1E-8 T 25-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SMA_RS03340 a795c2754d4fa58d6345c117cb58cb7a 238 PANTHER PTHR21600 1 236 5.5E-59 T 25-04-2016 SMA_RS03340 a795c2754d4fa58d6345c117cb58cb7a 238 SUPERFAMILY SSF55174 1 87 1.6E-13 T 25-04-2016 SMA_RS03340 a795c2754d4fa58d6345c117cb58cb7a 238 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 100 114 - T 25-04-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 SMA_RS03340 a795c2754d4fa58d6345c117cb58cb7a 238 SMART SM00363 1 63 1.1E-6 T 25-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SMA_RS03340 a795c2754d4fa58d6345c117cb58cb7a 238 PANTHER PTHR21600:SF19 1 236 5.5E-59 T 25-04-2016 SMA_RS08095 5c7809df9520209277f8cbda22875827 393 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 62 78 5.33E-5 T 25-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 SMA_RS08095 5c7809df9520209277f8cbda22875827 393 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 40 56 5.33E-5 T 25-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 SMA_RS08095 5c7809df9520209277f8cbda22875827 393 SUPERFAMILY SSF53822 38 379 4.32E-83 T 25-04-2016 IPR028082 Periplasmic binding protein-like I SMA_RS08095 5c7809df9520209277f8cbda22875827 393 Gene3D G3DSA:3.40.50.2300 38 239 3.3E-55 T 25-04-2016 SMA_RS08095 5c7809df9520209277f8cbda22875827 393 PANTHER PTHR30483 27 379 5.4E-86 T 25-04-2016 SMA_RS08095 5c7809df9520209277f8cbda22875827 393 PANTHER PTHR30483:SF6 27 379 5.4E-86 T 25-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 SMA_RS08095 5c7809df9520209277f8cbda22875827 393 Pfam PF13458 Periplasmic binding protein 39 379 2.2E-57 T 25-04-2016 IPR028081 Leucine-binding protein domain SMA_RS08915 684fbeba6768123b227b74e33ecca5ff 804 PANTHER PTHR11632 396 802 6.6E-89 T 25-04-2016 SMA_RS08915 684fbeba6768123b227b74e33ecca5ff 804 PANTHER PTHR11632 297 353 6.6E-89 T 25-04-2016 SMA_RS08915 684fbeba6768123b227b74e33ecca5ff 804 PANTHER PTHR11632:SF6 396 802 6.6E-89 T 25-04-2016 SMA_RS08915 684fbeba6768123b227b74e33ecca5ff 804 PANTHER PTHR11632:SF6 297 353 6.6E-89 T 25-04-2016 SMA_RS08915 684fbeba6768123b227b74e33ecca5ff 804 SUPERFAMILY SSF56425 590 739 1.39E-34 T 25-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain SMA_RS08915 684fbeba6768123b227b74e33ecca5ff 804 SMART SM00900 201 275 5.0E-17 T 25-04-2016 IPR007329 FMN-binding GO:0010181|GO:0016020 SMA_RS08915 684fbeba6768123b227b74e33ecca5ff 804 Gene3D G3DSA:3.90.700.10 613 735 4.8E-34 T 25-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain SMA_RS08915 684fbeba6768123b227b74e33ecca5ff 804 Gene3D G3DSA:3.50.50.60 400 588 3.1E-87 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMA_RS08915 684fbeba6768123b227b74e33ecca5ff 804 Gene3D G3DSA:3.50.50.60 286 355 3.1E-87 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMA_RS08915 684fbeba6768123b227b74e33ecca5ff 804 Gene3D G3DSA:3.50.50.60 740 800 3.1E-87 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMA_RS08915 684fbeba6768123b227b74e33ecca5ff 804 Gene3D G3DSA:3.40.50.360 1 182 7.4E-45 T 25-04-2016 IPR029039 Flavoprotein-like domain SMA_RS08915 684fbeba6768123b227b74e33ecca5ff 804 SUPERFAMILY SSF51905 387 410 5.25E-55 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMA_RS08915 684fbeba6768123b227b74e33ecca5ff 804 SUPERFAMILY SSF51905 743 800 5.25E-55 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMA_RS08915 684fbeba6768123b227b74e33ecca5ff 804 SUPERFAMILY SSF51905 437 605 5.25E-55 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMA_RS08915 684fbeba6768123b227b74e33ecca5ff 804 SUPERFAMILY SSF51905 292 360 5.25E-55 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMA_RS08915 684fbeba6768123b227b74e33ecca5ff 804 TIGRFAM TIGR01813 flavo_cyto_c: flavocytochrome c 422 795 9.5E-88 T 25-04-2016 IPR010960 Flavocytochrome c GO:0000104|GO:0055114 SMA_RS08915 684fbeba6768123b227b74e33ecca5ff 804 Pfam PF00890 FAD binding domain 429 784 1.2E-48 T 25-04-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain SMA_RS08915 684fbeba6768123b227b74e33ecca5ff 804 Pfam PF00890 FAD binding domain 303 350 2.8E-13 T 25-04-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain SMA_RS08915 684fbeba6768123b227b74e33ecca5ff 804 Pfam PF04205 FMN-binding domain 201 272 3.4E-10 T 25-04-2016 IPR007329 FMN-binding GO:0010181|GO:0016020 SMA_RS08915 684fbeba6768123b227b74e33ecca5ff 804 SUPERFAMILY SSF52218 1 172 2.09E-38 T 25-04-2016 IPR029039 Flavoprotein-like domain SMA_RS08915 684fbeba6768123b227b74e33ecca5ff 804 Pfam PF03358 NADPH-dependent FMN reductase 1 145 6.3E-34 T 25-04-2016 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 SMA_RS07410 a2aa57366046701d46b348f67408faa4 252 PANTHER PTHR21139 1 251 4.5E-116 T 25-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 SMA_RS07410 a2aa57366046701d46b348f67408faa4 252 ProSitePatterns PS00171 Triosephosphate isomerase active site. 166 176 - T 25-04-2016 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 SMA_RS07410 a2aa57366046701d46b348f67408faa4 252 Gene3D G3DSA:3.20.20.70 3 250 4.0E-101 T 25-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SMA_RS07410 a2aa57366046701d46b348f67408faa4 252 SUPERFAMILY SSF51351 1 250 3.53E-89 T 25-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 SMA_RS07410 a2aa57366046701d46b348f67408faa4 252 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 6 242 4.5E-58 T 25-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 SMA_RS07410 a2aa57366046701d46b348f67408faa4 252 Pfam PF00121 Triosephosphate isomerase 6 247 4.1E-90 T 25-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 SMA_RS07410 a2aa57366046701d46b348f67408faa4 252 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 3 251 38.91 T 25-04-2016 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 SMA_RS04850 ad934e5f458187299bb06c4c66768709 193 SUPERFAMILY SSF57716 140 190 8.08E-18 T 25-04-2016 SMA_RS04850 ad934e5f458187299bb06c4c66768709 193 Pfam PF00265 Thymidine kinase 3 184 7.0E-50 T 25-04-2016 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199 SMA_RS04850 ad934e5f458187299bb06c4c66768709 193 Gene3D G3DSA:3.40.50.300 8 106 9.8E-7 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS04850 ad934e5f458187299bb06c4c66768709 193 SUPERFAMILY SSF52540 2 140 7.2E-39 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS04850 ad934e5f458187299bb06c4c66768709 193 ProSitePatterns PS00603 Thymidine kinase cellular-type signature. 171 184 - T 25-04-2016 IPR020633 Thymidine kinase, conserved site GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199 SMA_RS04850 ad934e5f458187299bb06c4c66768709 193 PANTHER PTHR11441 1 192 3.2E-68 T 25-04-2016 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199 SMA_RS04850 ad934e5f458187299bb06c4c66768709 193 PIRSF PIRSF035805 1 193 1.0E-59 T 25-04-2016 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199 SMA_RS04850 ad934e5f458187299bb06c4c66768709 193 Gene3D G3DSA:3.30.60.20 140 189 3.4E-21 T 25-04-2016 SMA_RS04850 ad934e5f458187299bb06c4c66768709 193 Hamap MF_00124 Thymidine kinase [tdk]. 1 187 34.054 T 25-04-2016 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199 SMA_RS05865 bf9bfe3cab347351452ec20b81d39b41 316 Pfam PF00288 GHMP kinases N terminal domain 94 138 2.4E-6 T 25-04-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 SMA_RS05865 bf9bfe3cab347351452ec20b81d39b41 316 Pfam PF08544 GHMP kinases C terminal 213 289 7.9E-5 T 25-04-2016 IPR013750 GHMP kinase, C-terminal domain SMA_RS05865 bf9bfe3cab347351452ec20b81d39b41 316 PANTHER PTHR10977 1 301 1.0E-87 T 25-04-2016 IPR005935 Diphosphomevalonate/phosphomevalonate decarboxylase GO:0008299|GO:0016831 KEGG: 00900+4.1.1.33|MetaCyc: PWY-7391|MetaCyc: PWY-922 SMA_RS05865 bf9bfe3cab347351452ec20b81d39b41 316 Gene3D G3DSA:3.30.230.10 3 168 8.1E-61 T 25-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SMA_RS05865 bf9bfe3cab347351452ec20b81d39b41 316 TIGRFAM TIGR01240 mevDPdecarb: diphosphomevalonate decarboxylase 7 302 1.3E-127 T 25-04-2016 IPR029765 Diphosphomevalonate decarboxylase GO:0004163|GO:0005829|GO:0019287 KEGG: 00900+4.1.1.33|MetaCyc: PWY-7391|MetaCyc: PWY-922 SMA_RS05865 bf9bfe3cab347351452ec20b81d39b41 316 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 98 109 - T 25-04-2016 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 SMA_RS05865 bf9bfe3cab347351452ec20b81d39b41 316 SUPERFAMILY SSF55060 169 299 1.73E-43 T 25-04-2016 IPR013750 GHMP kinase, C-terminal domain SMA_RS05865 bf9bfe3cab347351452ec20b81d39b41 316 PANTHER PTHR10977:SF3 1 301 1.0E-87 T 25-04-2016 SMA_RS05865 bf9bfe3cab347351452ec20b81d39b41 316 Gene3D G3DSA:3.30.70.890 169 300 8.8E-54 T 25-04-2016 IPR013750 GHMP kinase, C-terminal domain SMA_RS05865 bf9bfe3cab347351452ec20b81d39b41 316 PIRSF PIRSF015950 1 315 1.2E-99 T 25-04-2016 IPR005935 Diphosphomevalonate/phosphomevalonate decarboxylase GO:0008299|GO:0016831 KEGG: 00900+4.1.1.33|MetaCyc: PWY-7391|MetaCyc: PWY-922 SMA_RS05865 bf9bfe3cab347351452ec20b81d39b41 316 SUPERFAMILY SSF54211 4 174 2.28E-32 T 25-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SMA_RS10015 2b7fa11f8293d544498e59c7332bc9f6 750 Gene3D G3DSA:3.30.1490.20 498 568 7.4E-11 T 25-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 SMA_RS10015 2b7fa11f8293d544498e59c7332bc9f6 750 Hamap MF_00782 Glutathione biosynthesis bifunctional protein GshAB [gshAB]. 1 750 399.475 T 25-04-2016 IPR006335 Glutathione biosynthesis bifunctional protein GshAB GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2+6.3.2.3|KEGG: 00480+6.3.2.2+6.3.2.3|MetaCyc: PWY-6840|MetaCyc: PWY-7255|UniPathway: UPA00142|UniPathway: UPA00142 SMA_RS10015 2b7fa11f8293d544498e59c7332bc9f6 750 Gene3D G3DSA:3.30.470.20 481 497 5.1E-5 T 25-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 SMA_RS10015 2b7fa11f8293d544498e59c7332bc9f6 750 Gene3D G3DSA:3.30.470.20 570 727 5.1E-5 T 25-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 SMA_RS10015 2b7fa11f8293d544498e59c7332bc9f6 750 TIGRFAM TIGR01435 glu_cys_lig_rel: glutamate--cysteine ligase/glutathione synthase 16 742 8.1E-248 T 25-04-2016 IPR006335 Glutathione biosynthesis bifunctional protein GshAB GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2+6.3.2.3|KEGG: 00480+6.3.2.2+6.3.2.3|MetaCyc: PWY-6840|MetaCyc: PWY-7255|UniPathway: UPA00142|UniPathway: UPA00142 SMA_RS10015 2b7fa11f8293d544498e59c7332bc9f6 750 PANTHER PTHR38761 22 465 1.4E-46 T 25-04-2016 SMA_RS10015 2b7fa11f8293d544498e59c7332bc9f6 750 Pfam PF04262 Glutamate-cysteine ligase 8 321 6.6E-70 T 25-04-2016 IPR007370 Glutamate--cysteine ligase GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255|UniPathway: UPA00142 SMA_RS10015 2b7fa11f8293d544498e59c7332bc9f6 750 SUPERFAMILY SSF55931 5 455 6.34E-136 T 25-04-2016 SMA_RS10015 2b7fa11f8293d544498e59c7332bc9f6 750 SUPERFAMILY SSF56059 653 739 3.54E-26 T 25-04-2016 SMA_RS10015 2b7fa11f8293d544498e59c7332bc9f6 750 SUPERFAMILY SSF56059 484 617 3.54E-26 T 25-04-2016 SMA_RS10015 2b7fa11f8293d544498e59c7332bc9f6 750 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 484 580 3.4E-7 T 25-04-2016 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 SMA_RS04415 2b0c30696f2bea2a96d9c4aed2269f82 370 Pfam PF00534 Glycosyl transferases group 1 189 312 9.8E-22 T 25-04-2016 IPR001296 Glycosyl transferase, family 1 SMA_RS04415 2b0c30696f2bea2a96d9c4aed2269f82 370 PANTHER PTHR12526 1 302 6.0E-34 T 25-04-2016 SMA_RS04415 2b0c30696f2bea2a96d9c4aed2269f82 370 Gene3D G3DSA:3.40.50.2000 168 303 4.2E-23 T 25-04-2016 SMA_RS04415 2b0c30696f2bea2a96d9c4aed2269f82 370 SUPERFAMILY SSF53756 4 368 2.23E-52 T 25-04-2016 SMA_RS04415 2b0c30696f2bea2a96d9c4aed2269f82 370 Pfam PF13439 Glycosyltransferase Family 4 16 174 8.0E-8 T 25-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain SMA_RS05700 0bd0ab41fa0fadb8b25ac5b0b3be9077 475 SUPERFAMILY SSF51445 9 472 1.03E-161 T 25-04-2016 IPR017853 Glycoside hydrolase superfamily SMA_RS05700 0bd0ab41fa0fadb8b25ac5b0b3be9077 475 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 16 30 - T 25-04-2016 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site SMA_RS05700 0bd0ab41fa0fadb8b25ac5b0b3be9077 475 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 378 386 - T 25-04-2016 IPR018120 Glycoside hydrolase family 1, active site SMA_RS05700 0bd0ab41fa0fadb8b25ac5b0b3be9077 475 Gene3D G3DSA:3.20.20.80 10 473 1.4E-151 T 25-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 SMA_RS05700 0bd0ab41fa0fadb8b25ac5b0b3be9077 475 PANTHER PTHR10353 293 475 0.0 T 25-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 SMA_RS05700 0bd0ab41fa0fadb8b25ac5b0b3be9077 475 PANTHER PTHR10353 1 270 0.0 T 25-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 SMA_RS05700 0bd0ab41fa0fadb8b25ac5b0b3be9077 475 Hamap MF_01574 6-phospho-beta-galactosidase [lacG]. 8 475 66.366 T 25-04-2016 IPR005928 6-phospho-beta-galactosidase GO:0019512|GO:0033920 KEGG: 00052+3.2.1.85|UniPathway: UPA00542 SMA_RS05700 0bd0ab41fa0fadb8b25ac5b0b3be9077 475 PRINTS PR00131 Glycosyl hydrolase family 1 signature 443 455 2.8E-24 T 25-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 SMA_RS05700 0bd0ab41fa0fadb8b25ac5b0b3be9077 475 PRINTS PR00131 Glycosyl hydrolase family 1 signature 297 311 2.8E-24 T 25-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 SMA_RS05700 0bd0ab41fa0fadb8b25ac5b0b3be9077 475 PRINTS PR00131 Glycosyl hydrolase family 1 signature 419 436 2.8E-24 T 25-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 SMA_RS05700 0bd0ab41fa0fadb8b25ac5b0b3be9077 475 PRINTS PR00131 Glycosyl hydrolase family 1 signature 378 386 2.8E-24 T 25-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 SMA_RS05700 0bd0ab41fa0fadb8b25ac5b0b3be9077 475 PRINTS PR00131 Glycosyl hydrolase family 1 signature 398 409 2.8E-24 T 25-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 SMA_RS05700 0bd0ab41fa0fadb8b25ac5b0b3be9077 475 Pfam PF00232 Glycosyl hydrolase family 1 9 472 1.1E-167 T 25-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 SMA_RS05700 0bd0ab41fa0fadb8b25ac5b0b3be9077 475 PANTHER PTHR10353:SF62 293 475 0.0 T 25-04-2016 SMA_RS05700 0bd0ab41fa0fadb8b25ac5b0b3be9077 475 PANTHER PTHR10353:SF62 1 270 0.0 T 25-04-2016 SMA_RS05700 0bd0ab41fa0fadb8b25ac5b0b3be9077 475 TIGRFAM TIGR01233 lacG: 6-phospho-beta-galactosidase 9 475 3.6E-286 T 25-04-2016 IPR005928 6-phospho-beta-galactosidase GO:0019512|GO:0033920 KEGG: 00052+3.2.1.85|UniPathway: UPA00542 SMA_RS08345 491ec3e7d83c5736c1cc1409ea54fba2 414 PANTHER PTHR11482 10 414 2.3E-129 T 25-04-2016 SMA_RS08345 491ec3e7d83c5736c1cc1409ea54fba2 414 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 29 276 4.8E-24 T 25-04-2016 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 Reactome: REACT_13 SMA_RS08345 491ec3e7d83c5736c1cc1409ea54fba2 414 PANTHER PTHR11482:SF5 10 414 2.3E-129 T 25-04-2016 SMA_RS08345 491ec3e7d83c5736c1cc1409ea54fba2 414 Gene3D G3DSA:3.20.20.10 28 264 1.9E-57 T 25-04-2016 IPR029066 PLP-binding barrel SMA_RS08345 491ec3e7d83c5736c1cc1409ea54fba2 414 PRINTS PR01181 Diaminopimelate decarboxylase signature 152 161 1.1E-7 T 25-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 SMA_RS08345 491ec3e7d83c5736c1cc1409ea54fba2 414 PRINTS PR01181 Diaminopimelate decarboxylase signature 374 396 1.1E-7 T 25-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 SMA_RS08345 491ec3e7d83c5736c1cc1409ea54fba2 414 PRINTS PR01181 Diaminopimelate decarboxylase signature 293 311 1.1E-7 T 25-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 SMA_RS08345 491ec3e7d83c5736c1cc1409ea54fba2 414 SUPERFAMILY SSF50621 253 405 4.81E-46 T 25-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 SMA_RS08345 491ec3e7d83c5736c1cc1409ea54fba2 414 Gene3D G3DSA:2.40.37.10 265 408 1.3E-45 T 25-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 SMA_RS08345 491ec3e7d83c5736c1cc1409ea54fba2 414 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 281 383 4.8E-15 T 25-04-2016 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 Reactome: REACT_13 SMA_RS08345 491ec3e7d83c5736c1cc1409ea54fba2 414 SUPERFAMILY SSF51419 19 278 3.43E-55 T 25-04-2016 IPR029066 PLP-binding barrel SMA_RS08345 491ec3e7d83c5736c1cc1409ea54fba2 414 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 71 83 2.4E-11 T 25-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 SMA_RS08345 491ec3e7d83c5736c1cc1409ea54fba2 414 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 364 377 2.4E-11 T 25-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 SMA_RS08345 491ec3e7d83c5736c1cc1409ea54fba2 414 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 266 285 2.4E-11 T 25-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 SMA_RS08345 491ec3e7d83c5736c1cc1409ea54fba2 414 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 51 69 2.4E-11 T 25-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 SMA_RS05575 ff02872fdcb5f21f00e3c9e003a9779e 262 Gene3D G3DSA:1.10.3720.10 2 255 7.9E-54 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SMA_RS05575 ff02872fdcb5f21f00e3c9e003a9779e 262 PANTHER PTHR30222 8 255 1.2E-67 T 25-04-2016 SMA_RS05575 ff02872fdcb5f21f00e3c9e003a9779e 262 SUPERFAMILY SSF161098 8 248 1.03E-47 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SMA_RS05575 ff02872fdcb5f21f00e3c9e003a9779e 262 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 76 250 3.1E-16 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SMA_RS05575 ff02872fdcb5f21f00e3c9e003a9779e 262 PANTHER PTHR30222:SF1 8 255 1.2E-67 T 25-04-2016 SMA_RS05775 748e1624b4577a20529ac641c25e4346 121 SUPERFAMILY SSF48300 3 51 1.27E-13 T 25-04-2016 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS05775 748e1624b4577a20529ac641c25e4346 121 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 55 121 2.0E-27 T 25-04-2016 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 SMA_RS05775 748e1624b4577a20529ac641c25e4346 121 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 2 121 22.884 T 25-04-2016 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS05775 748e1624b4577a20529ac641c25e4346 121 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 56 121 4.0E-28 T 25-04-2016 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 SMA_RS05775 748e1624b4577a20529ac641c25e4346 121 Gene3D G3DSA:1.20.5.710 2 51 1.2E-20 T 25-04-2016 SMA_RS05775 748e1624b4577a20529ac641c25e4346 121 SUPERFAMILY SSF54736 52 121 8.89E-22 T 25-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like SMA_RS05775 748e1624b4577a20529ac641c25e4346 121 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 5 51 5.9E-18 T 25-04-2016 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS05775 748e1624b4577a20529ac641c25e4346 121 Gene3D G3DSA:3.30.1390.10 52 121 7.3E-29 T 25-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like SMA_RS05775 748e1624b4577a20529ac641c25e4346 121 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 121 7.8E-42 T 25-04-2016 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS03775 2d20100f2442d816c2d9bae05dc7c580 468 SUPERFAMILY SSF52540 81 353 5.81E-89 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS03775 2d20100f2442d816c2d9bae05dc7c580 468 Gene3D G3DSA:3.40.50.300 80 349 5.4E-108 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS03775 2d20100f2442d816c2d9bae05dc7c580 468 PANTHER PTHR15184:SF8 1 466 0.0 T 25-04-2016 SMA_RS03775 2d20100f2442d816c2d9bae05dc7c580 468 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 339 348 - T 25-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SMA_RS03775 2d20100f2442d816c2d9bae05dc7c580 468 SUPERFAMILY SSF50615 2 78 3.92E-22 T 25-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SMA_RS03775 2d20100f2442d816c2d9bae05dc7c580 468 PANTHER PTHR15184 1 466 0.0 T 25-04-2016 SMA_RS03775 2d20100f2442d816c2d9bae05dc7c580 468 Hamap MF_01347 ATP synthase subunit beta [atpB]. 1 466 56.988 T 25-04-2016 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SMA_RS03775 2d20100f2442d816c2d9bae05dc7c580 468 Gene3D G3DSA:1.10.1140.10 351 467 7.3E-51 T 25-04-2016 IPR024034 ATPase, F1 complex beta subunit/V1 complex, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SMA_RS03775 2d20100f2442d816c2d9bae05dc7c580 468 SMART SM00382 147 332 2.0E-7 T 25-04-2016 IPR003593 AAA+ ATPase domain SMA_RS03775 2d20100f2442d816c2d9bae05dc7c580 468 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 3 466 2.4E-252 T 25-04-2016 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SMA_RS03775 2d20100f2442d816c2d9bae05dc7c580 468 Gene3D G3DSA:2.40.10.170 2 78 9.0E-29 T 25-04-2016 SMA_RS03775 2d20100f2442d816c2d9bae05dc7c580 468 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 135 348 1.6E-67 T 25-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SMA_RS03775 2d20100f2442d816c2d9bae05dc7c580 468 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 6 77 3.7E-20 T 25-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SMA_RS03775 2d20100f2442d816c2d9bae05dc7c580 468 SUPERFAMILY SSF47917 351 467 4.71E-51 T 25-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SMA_RS08400 019df8edc2012b58048a9c96fa05b319 390 PANTHER PTHR33678 50 380 9.1E-55 T 25-04-2016 SMA_RS08400 019df8edc2012b58048a9c96fa05b319 390 PANTHER PTHR33678:SF1 50 380 9.1E-55 T 25-04-2016 SMA_RS08400 019df8edc2012b58048a9c96fa05b319 390 Pfam PF13005 zinc-finger binding domain of transposase IS66 51 95 2.5E-13 T 25-04-2016 IPR024474 Zinc-finger binding domain of transposase IS66 SMA_RS08400 019df8edc2012b58048a9c96fa05b319 390 Pfam PF03050 Transposase IS66 family 117 382 2.5E-74 T 25-04-2016 IPR004291 Transposase, IS66 SMA_RS04895 2860d9dcb81c5bb29579117b5f1c3a3f 484 Pfam PF09154 Domain of unknown function (DUF1939) 424 480 1.9E-6 T 25-04-2016 IPR015237 Alpha-amylase C-terminal, prokaryotic GO:0004553 SMA_RS04895 2860d9dcb81c5bb29579117b5f1c3a3f 484 PIRSF PIRSF001021 1 484 9.3E-215 T 25-04-2016 IPR013776 Alpha-amylase, thermostable GO:0004553|GO:0005509|GO:0005975 KEGG: 00500+3.2.1.1 SMA_RS04895 2860d9dcb81c5bb29579117b5f1c3a3f 484 SUPERFAMILY SSF51011 396 482 1.06E-29 T 25-04-2016 SMA_RS04895 2860d9dcb81c5bb29579117b5f1c3a3f 484 Pfam PF00128 Alpha amylase, catalytic domain 35 375 1.3E-30 T 25-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 SMA_RS04895 2860d9dcb81c5bb29579117b5f1c3a3f 484 Gene3D G3DSA:2.60.40.1180 398 482 5.1E-32 T 25-04-2016 IPR013780 Glycosyl hydrolase, all-beta SMA_RS04895 2860d9dcb81c5bb29579117b5f1c3a3f 484 PANTHER PTHR10357:SF168 131 483 6.6E-152 T 25-04-2016 SMA_RS04895 2860d9dcb81c5bb29579117b5f1c3a3f 484 PANTHER PTHR10357:SF168 3 109 6.6E-152 T 25-04-2016 SMA_RS04895 2860d9dcb81c5bb29579117b5f1c3a3f 484 PANTHER PTHR10357 131 483 6.6E-152 T 25-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 SMA_RS04895 2860d9dcb81c5bb29579117b5f1c3a3f 484 PANTHER PTHR10357 3 109 6.6E-152 T 25-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 SMA_RS04895 2860d9dcb81c5bb29579117b5f1c3a3f 484 SMART SM00642 4 392 1.8E-67 T 25-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 SMA_RS04895 2860d9dcb81c5bb29579117b5f1c3a3f 484 Gene3D G3DSA:3.20.20.80 2 395 1.8E-74 T 25-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 SMA_RS04895 2860d9dcb81c5bb29579117b5f1c3a3f 484 SUPERFAMILY SSF51445 4 376 2.24E-94 T 25-04-2016 IPR017853 Glycoside hydrolase superfamily SMA_RS00285 eec20c6a4f48bb693e8c256f05ffc507 143 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 113 128 3.1E-14 T 25-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 SMA_RS00285 eec20c6a4f48bb693e8c256f05ffc507 143 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 43 59 3.1E-14 T 25-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 SMA_RS00285 eec20c6a4f48bb693e8c256f05ffc507 143 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 78 93 3.1E-14 T 25-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 SMA_RS00285 eec20c6a4f48bb693e8c256f05ffc507 143 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 4 21 3.1E-14 T 25-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 SMA_RS00285 eec20c6a4f48bb693e8c256f05ffc507 143 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 4 137 1.9E-30 T 25-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily SMA_RS00285 eec20c6a4f48bb693e8c256f05ffc507 143 SUPERFAMILY SSF52788 1 140 3.01E-41 T 25-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily SMA_RS00285 eec20c6a4f48bb693e8c256f05ffc507 143 PANTHER PTHR11717 1 137 1.2E-34 T 25-04-2016 SMA_RS00285 eec20c6a4f48bb693e8c256f05ffc507 143 Gene3D G3DSA:3.40.50.270 1 142 5.6E-43 T 25-04-2016 SMA_RS00285 eec20c6a4f48bb693e8c256f05ffc507 143 SMART SM00226 2 139 5.9E-38 T 25-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily SMA_RS00295 1f370dbbe7d95343ce2a08186f34c102 597 PANTHER PTHR23028:SF53 14 347 3.6E-56 T 25-04-2016 SMA_RS00295 1f370dbbe7d95343ce2a08186f34c102 597 PANTHER PTHR23028 14 347 3.6E-56 T 25-04-2016 SMA_RS00295 1f370dbbe7d95343ce2a08186f34c102 597 Gene3D G3DSA:3.40.50.1110 488 585 6.5E-4 T 25-04-2016 IPR013830 SGNH hydrolase-type esterase domain SMA_RS00295 1f370dbbe7d95343ce2a08186f34c102 597 SUPERFAMILY SSF52266 409 583 1.07E-6 T 25-04-2016 IPR013830 SGNH hydrolase-type esterase domain SMA_RS00295 1f370dbbe7d95343ce2a08186f34c102 597 Pfam PF01757 Acyltransferase family 4 345 8.0E-24 T 25-04-2016 IPR002656 Acyltransferase 3 GO:0016747 SMA_RS03675 2425cd50ebed23e64fe5f97bbc6e646f 310 SUPERFAMILY SSF55681 69 246 2.77E-43 T 25-04-2016 SMA_RS03675 2425cd50ebed23e64fe5f97bbc6e646f 310 Pfam PF08279 HTH domain 6 57 1.1E-14 T 25-04-2016 IPR013196 Helix-turn-helix, type 11 SMA_RS03675 2425cd50ebed23e64fe5f97bbc6e646f 310 Gene3D G3DSA:1.10.10.10 1 61 1.1E-19 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMA_RS03675 2425cd50ebed23e64fe5f97bbc6e646f 310 SUPERFAMILY SSF46785 6 58 3.85E-9 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMA_RS03675 2425cd50ebed23e64fe5f97bbc6e646f 310 PANTHER PTHR12835 1 307 1.9E-49 T 25-04-2016 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 SMA_RS03675 2425cd50ebed23e64fe5f97bbc6e646f 310 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 82 307 4.9E-39 T 25-04-2016 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 SMA_RS03675 2425cd50ebed23e64fe5f97bbc6e646f 310 SUPERFAMILY SSF50037 264 307 6.41E-6 T 25-04-2016 IPR008988 Transcriptional repressor, C-terminal SMA_RS03675 2425cd50ebed23e64fe5f97bbc6e646f 310 Gene3D G3DSA:2.30.30.100 262 307 2.9E-8 T 25-04-2016 SMA_RS03675 2425cd50ebed23e64fe5f97bbc6e646f 310 Hamap MF_00978 Bifunctional ligase/repressor BirA [birA]. 6 308 28.116 T 25-04-2016 IPR030855 Bifunctional ligase/repressor BirA GO:0004077|GO:0006355 KEGG: 00780+6.3.4.15 SMA_RS03675 2425cd50ebed23e64fe5f97bbc6e646f 310 Gene3D G3DSA:3.30.930.10 73 244 6.2E-42 T 25-04-2016 SMA_RS03675 2425cd50ebed23e64fe5f97bbc6e646f 310 Pfam PF03099 Biotin/lipoate A/B protein ligase family 116 206 2.0E-12 T 25-04-2016 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 SMA_RS03675 2425cd50ebed23e64fe5f97bbc6e646f 310 Pfam PF02237 Biotin protein ligase C terminal domain 262 308 5.9E-9 T 25-04-2016 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15 SMA_RS03205 15627f08f23c6bc918f832ebaeffdd09 311 SUPERFAMILY SSF51395 1 307 5.19E-66 T 25-04-2016 SMA_RS03205 15627f08f23c6bc918f832ebaeffdd09 311 Hamap MF_00224 Dihydroorotate dehydrogenase [pyrD]. 4 307 28.402 T 25-04-2016 IPR024920 Dihydroorotate dehydrogenase, class 1 GO:0004152|GO:0005737|GO:0006221 SMA_RS03205 15627f08f23c6bc918f832ebaeffdd09 311 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 244 264 - T 25-04-2016 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 SMA_RS03205 15627f08f23c6bc918f832ebaeffdd09 311 PANTHER PTHR11938:SF106 26 311 5.8E-156 T 25-04-2016 SMA_RS03205 15627f08f23c6bc918f832ebaeffdd09 311 Pfam PF01180 Dihydroorotate dehydrogenase 5 292 3.8E-77 T 25-04-2016 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 SMA_RS03205 15627f08f23c6bc918f832ebaeffdd09 311 Gene3D G3DSA:3.20.20.70 1 308 5.4E-74 T 25-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SMA_RS03205 15627f08f23c6bc918f832ebaeffdd09 311 PANTHER PTHR11938 26 311 5.8E-156 T 25-04-2016 SMA_RS03205 15627f08f23c6bc918f832ebaeffdd09 311 TIGRFAM TIGR01037 pyrD_sub1_fam: dihydroorotate dehydrogenase family protein 6 305 7.2E-51 T 25-04-2016 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 SMA_RS03205 15627f08f23c6bc918f832ebaeffdd09 311 PIRSF PIRSF000164 1 308 8.9E-66 T 25-04-2016 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 Reactome: REACT_1698 SMA_RS10060 86082e9712ee70ce5595512f3454a19f 345 SUPERFAMILY SSF54713 176 205 1.67E-35 T 25-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 SMA_RS10060 86082e9712ee70ce5595512f3454a19f 345 SUPERFAMILY SSF54713 56 91 1.67E-35 T 25-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 SMA_RS10060 86082e9712ee70ce5595512f3454a19f 345 SUPERFAMILY SSF54713 248 322 1.67E-35 T 25-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 SMA_RS10060 86082e9712ee70ce5595512f3454a19f 345 Gene3D G3DSA:3.30.479.20 56 145 7.2E-16 T 25-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 SMA_RS10060 86082e9712ee70ce5595512f3454a19f 345 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 339 6.0E-95 T 25-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 SMA_RS10060 86082e9712ee70ce5595512f3454a19f 345 Gene3D G3DSA:1.10.286.20 236 276 3.1E-7 T 25-04-2016 SMA_RS10060 86082e9712ee70ce5595512f3454a19f 345 Gene3D G3DSA:3.30.479.20 152 188 9.4E-29 T 25-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 SMA_RS10060 86082e9712ee70ce5595512f3454a19f 345 Gene3D G3DSA:3.30.479.20 285 321 9.4E-29 T 25-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 SMA_RS10060 86082e9712ee70ce5595512f3454a19f 345 Hamap MF_00050 Elongation factor Ts [tsf]. 1 340 67.373 T 25-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 SMA_RS10060 86082e9712ee70ce5595512f3454a19f 345 ProSitePatterns PS01126 Elongation factor Ts signature 1. 11 26 - T 25-04-2016 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 SMA_RS10060 86082e9712ee70ce5595512f3454a19f 345 SUPERFAMILY SSF46934 1 55 3.18E-19 T 25-04-2016 IPR009060 UBA-like GO:0005515 SMA_RS10060 86082e9712ee70ce5595512f3454a19f 345 PANTHER PTHR11741 1 208 5.9E-120 T 25-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 SMA_RS10060 86082e9712ee70ce5595512f3454a19f 345 PANTHER PTHR11741 251 342 5.9E-120 T 25-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 SMA_RS10060 86082e9712ee70ce5595512f3454a19f 345 ProSitePatterns PS01127 Elongation factor Ts signature 2. 74 84 - T 25-04-2016 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 SMA_RS10060 86082e9712ee70ce5595512f3454a19f 345 Gene3D G3DSA:1.10.8.10 1 54 1.0E-26 T 25-04-2016 SMA_RS10060 86082e9712ee70ce5595512f3454a19f 345 Pfam PF00889 Elongation factor TS 70 322 3.9E-66 T 25-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 SMA_RS09435 a83d4af1249d4fcb3040117dd694e3a6 420 PIRSF PIRSF500216 10 414 2.9E-180 T 25-04-2016 IPR024024 D-alanyl transfer protein DltB UniPathway: UPA00556 SMA_RS09435 a83d4af1249d4fcb3040117dd694e3a6 420 TIGRFAM TIGR04091 LTA_dltB: D-alanyl-lipoteichoic acid biosynthesis protein DltB 13 409 3.5E-166 T 25-04-2016 IPR024024 D-alanyl transfer protein DltB UniPathway: UPA00556 SMA_RS09435 a83d4af1249d4fcb3040117dd694e3a6 420 PANTHER PTHR13285 19 409 2.0E-57 T 25-04-2016 SMA_RS09435 a83d4af1249d4fcb3040117dd694e3a6 420 PIRSF PIRSF016636 14 408 2.3E-78 T 25-04-2016 IPR024194 Alginate O-acetyltransferase AlgI/D-alanyl transfer protein DltB SMA_RS08180 73e93171828d9b99d7c4085fd648678d 243 Pfam PF03883 Protein of unknown function (DUF328) 1 229 2.7E-57 T 25-04-2016 IPR005583 Peroxide stress protein YaaA SMA_RS08180 73e93171828d9b99d7c4085fd648678d 243 Hamap MF_00652 UPF0246 protein YaaA [yaaA]. 1 241 27.772 T 25-04-2016 IPR005583 Peroxide stress protein YaaA SMA_RS08180 73e93171828d9b99d7c4085fd648678d 243 PANTHER PTHR30283 2 241 1.5E-55 T 25-04-2016 SMA_RS08180 73e93171828d9b99d7c4085fd648678d 243 PANTHER PTHR30283:SF3 2 241 1.5E-55 T 25-04-2016 SMA_RS09960 946b1a677b946fd400aac76ea827d3bf 252 Pfam PF06161 Protein of unknown function (DUF975) 1 250 1.7E-53 T 25-04-2016 IPR010380 Protein of unknown function DUF975 SMA_RS09960 946b1a677b946fd400aac76ea827d3bf 252 PANTHER PTHR40076 1 252 1.5E-22 T 25-04-2016 SMA_RS09960 946b1a677b946fd400aac76ea827d3bf 252 PANTHER PTHR40076:SF1 1 252 1.5E-22 T 25-04-2016 SMA_RS04890 a11ecab268e7acd4c527ab93aaad9e36 578 SUPERFAMILY SSF90123 10 327 9.03E-69 T 25-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SMA_RS04890 a11ecab268e7acd4c527ab93aaad9e36 578 Gene3D G3DSA:3.40.50.300 340 572 2.4E-75 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS04890 a11ecab268e7acd4c527ab93aaad9e36 578 ProSitePatterns PS00211 ABC transporters family signature. 478 492 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SMA_RS04890 a11ecab268e7acd4c527ab93aaad9e36 578 Pfam PF00664 ABC transporter transmembrane region 26 294 3.3E-35 T 25-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SMA_RS04890 a11ecab268e7acd4c527ab93aaad9e36 578 SMART SM00382 366 552 4.3E-15 T 25-04-2016 IPR003593 AAA+ ATPase domain SMA_RS04890 a11ecab268e7acd4c527ab93aaad9e36 578 PANTHER PTHR24221:SF271 2 576 1.3E-270 T 25-04-2016 SMA_RS04890 a11ecab268e7acd4c527ab93aaad9e36 578 SUPERFAMILY SSF52540 335 576 3.85E-87 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS04890 a11ecab268e7acd4c527ab93aaad9e36 578 Gene3D G3DSA:1.20.1560.10 11 325 2.6E-64 T 25-04-2016 SMA_RS04890 a11ecab268e7acd4c527ab93aaad9e36 578 PANTHER PTHR24221 2 576 1.3E-270 T 25-04-2016 SMA_RS04890 a11ecab268e7acd4c527ab93aaad9e36 578 Pfam PF00005 ABC transporter 358 506 2.2E-29 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMA_RS08960 6ff58bc27a55d0bc848db52aa0eaddcd 778 SMART SM00463 700 778 5.6E-20 T 25-04-2016 IPR002625 Smr domain SMA_RS08960 6ff58bc27a55d0bc848db52aa0eaddcd 778 Hamap MF_00092 Endonuclease MutS2 [mutS2]. 2 777 19.867 T 25-04-2016 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 SMA_RS08960 6ff58bc27a55d0bc848db52aa0eaddcd 778 Pfam PF00488 MutS domain V 324 505 1.5E-35 T 25-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 SMA_RS08960 6ff58bc27a55d0bc848db52aa0eaddcd 778 PANTHER PTHR11361:SF14 1 593 3.7E-218 T 25-04-2016 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 SMA_RS08960 6ff58bc27a55d0bc848db52aa0eaddcd 778 TIGRFAM TIGR01069 mutS2: MutS2 family protein 1 778 9.3E-218 T 25-04-2016 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 SMA_RS08960 6ff58bc27a55d0bc848db52aa0eaddcd 778 SUPERFAMILY SSF160443 701 776 1.57E-9 T 25-04-2016 IPR002625 Smr domain SMA_RS08960 6ff58bc27a55d0bc848db52aa0eaddcd 778 Gene3D G3DSA:3.40.50.300 288 506 3.6E-62 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS08960 6ff58bc27a55d0bc848db52aa0eaddcd 778 Pfam PF01713 Smr domain 703 777 1.2E-18 T 25-04-2016 IPR002625 Smr domain SMA_RS08960 6ff58bc27a55d0bc848db52aa0eaddcd 778 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 403 419 - T 25-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 SMA_RS08960 6ff58bc27a55d0bc848db52aa0eaddcd 778 SMART SM00533 13 310 1.4E-12 T 25-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 SMA_RS08960 6ff58bc27a55d0bc848db52aa0eaddcd 778 PANTHER PTHR11361 1 593 3.7E-218 T 25-04-2016 SMA_RS08960 6ff58bc27a55d0bc848db52aa0eaddcd 778 SMART SM00534 321 506 8.1E-70 T 25-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 SMA_RS08960 6ff58bc27a55d0bc848db52aa0eaddcd 778 SUPERFAMILY SSF52540 288 506 3.66E-40 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS08960 6ff58bc27a55d0bc848db52aa0eaddcd 778 PIRSF PIRSF005814 1 778 6.6E-255 T 25-04-2016 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 SMA_RS08960 6ff58bc27a55d0bc848db52aa0eaddcd 778 SUPERFAMILY SSF48334 24 277 3.79E-30 T 25-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 SMA_RS08000 2e53ff0b14e5e6a3081f196375c2c721 118 Gene3D G3DSA:3.40.30.10 1 113 6.8E-37 T 25-04-2016 IPR012336 Thioredoxin-like fold SMA_RS08000 2e53ff0b14e5e6a3081f196375c2c721 118 Pfam PF03960 ArsC family 43 107 4.6E-11 T 25-04-2016 IPR006660 Arsenate reductase-like SMA_RS08000 2e53ff0b14e5e6a3081f196375c2c721 118 PANTHER PTHR30041 1 104 6.1E-32 T 25-04-2016 SMA_RS08000 2e53ff0b14e5e6a3081f196375c2c721 118 SUPERFAMILY SSF52833 1 109 4.62E-30 T 25-04-2016 IPR012336 Thioredoxin-like fold SMA_RS08000 2e53ff0b14e5e6a3081f196375c2c721 118 PANTHER PTHR30041:SF3 1 104 6.1E-32 T 25-04-2016 SMA_RS08000 2e53ff0b14e5e6a3081f196375c2c721 118 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 3 110 1.7E-29 T 25-04-2016 IPR006504 Transcriptional regulator Spx/MgsR SMA_RS01415 69de1304f5d48d423f64e67a62441acb 727 Pfam PF01138 3' exoribonuclease family, domain 1 12 142 4.4E-19 T 25-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 SMA_RS01415 69de1304f5d48d423f64e67a62441acb 727 Pfam PF01138 3' exoribonuclease family, domain 1 326 459 5.5E-16 T 25-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 SMA_RS01415 69de1304f5d48d423f64e67a62441acb 727 Gene3D G3DSA:1.10.10.400 228 313 2.2E-35 T 25-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 SMA_RS01415 69de1304f5d48d423f64e67a62441acb 727 PIRSF PIRSF005499 1 723 3.7E-285 T 25-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 SMA_RS01415 69de1304f5d48d423f64e67a62441acb 727 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 10 694 2.0E-299 T 25-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 SMA_RS01415 69de1304f5d48d423f64e67a62441acb 727 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 2 696 29.427 T 25-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 SMA_RS01415 69de1304f5d48d423f64e67a62441acb 727 Pfam PF00575 S1 RNA binding domain 622 693 2.1E-19 T 25-04-2016 IPR003029 S1 domain GO:0003676 SMA_RS01415 69de1304f5d48d423f64e67a62441acb 727 SUPERFAMILY SSF55666 143 233 2.88E-28 T 25-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 SMA_RS01415 69de1304f5d48d423f64e67a62441acb 727 Gene3D G3DSA:3.30.230.70 314 545 4.1E-85 T 25-04-2016 IPR027408 PNPase/RNase PH domain SMA_RS01415 69de1304f5d48d423f64e67a62441acb 727 Gene3D G3DSA:3.30.230.70 5 222 2.7E-81 T 25-04-2016 IPR027408 PNPase/RNase PH domain SMA_RS01415 69de1304f5d48d423f64e67a62441acb 727 Gene3D G3DSA:3.30.1370.10 554 623 5.1E-24 T 25-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 SMA_RS01415 69de1304f5d48d423f64e67a62441acb 727 Pfam PF03725 3' exoribonuclease family, domain 2 145 208 2.7E-13 T 25-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 SMA_RS01415 69de1304f5d48d423f64e67a62441acb 727 Pfam PF03725 3' exoribonuclease family, domain 2 462 532 3.6E-8 T 25-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 SMA_RS01415 69de1304f5d48d423f64e67a62441acb 727 SUPERFAMILY SSF54211 297 490 2.63E-44 T 25-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SMA_RS01415 69de1304f5d48d423f64e67a62441acb 727 SUPERFAMILY SSF50249 623 705 2.86E-22 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMA_RS01415 69de1304f5d48d423f64e67a62441acb 727 SMART SM00322 555 620 9.1E-12 T 25-04-2016 IPR004087 K Homology domain GO:0003676 SMA_RS01415 69de1304f5d48d423f64e67a62441acb 727 PANTHER PTHR11252:SF0 1 710 0.0 T 25-04-2016 SMA_RS01415 69de1304f5d48d423f64e67a62441acb 727 SUPERFAMILY SSF46915 236 323 4.18E-14 T 25-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 SMA_RS01415 69de1304f5d48d423f64e67a62441acb 727 PANTHER PTHR11252 1 710 0.0 T 25-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 SMA_RS01415 69de1304f5d48d423f64e67a62441acb 727 Gene3D G3DSA:2.40.50.140 624 696 5.5E-25 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMA_RS01415 69de1304f5d48d423f64e67a62441acb 727 SUPERFAMILY SSF54791 559 643 1.38E-21 T 25-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 SMA_RS01415 69de1304f5d48d423f64e67a62441acb 727 SUPERFAMILY SSF55666 453 550 4.58E-28 T 25-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 SMA_RS01415 69de1304f5d48d423f64e67a62441acb 727 Pfam PF00013 KH domain 560 615 1.9E-9 T 25-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 SMA_RS01415 69de1304f5d48d423f64e67a62441acb 727 SUPERFAMILY SSF54211 6 142 4.25E-44 T 25-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SMA_RS01415 69de1304f5d48d423f64e67a62441acb 727 SMART SM00316 623 693 5.3E-25 T 25-04-2016 IPR022967 RNA-binding domain, S1 SMA_RS01415 69de1304f5d48d423f64e67a62441acb 727 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 239 323 1.4E-11 T 25-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 SMA_RS03105 0990cc69dafd6bb3a1dab8c93b86586d 244 PIRSF PIRSF039085 2 244 1.2E-116 T 25-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 SMA_RS03105 0990cc69dafd6bb3a1dab8c93b86586d 244 PANTHER PTHR24220 7 244 9.8E-142 T 25-04-2016 SMA_RS03105 0990cc69dafd6bb3a1dab8c93b86586d 244 SUPERFAMILY SSF52540 5 239 1.43E-81 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS03105 0990cc69dafd6bb3a1dab8c93b86586d 244 Gene3D G3DSA:3.40.50.300 4 241 1.4E-87 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS03105 0990cc69dafd6bb3a1dab8c93b86586d 244 Pfam PF00005 ABC transporter 21 169 4.0E-37 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMA_RS03105 0990cc69dafd6bb3a1dab8c93b86586d 244 PANTHER PTHR24220:SF327 7 244 9.8E-142 T 25-04-2016 SMA_RS03105 0990cc69dafd6bb3a1dab8c93b86586d 244 SMART SM00382 30 217 3.3E-15 T 25-04-2016 IPR003593 AAA+ ATPase domain SMA_RS03105 0990cc69dafd6bb3a1dab8c93b86586d 244 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SMA_RS08290 87dd96caeb91465c2104e31fa1c1e10e 86 Hamap MF_00386 Putative membrane protein insertion efficiency factor [yidD]. 1 68 23.082 T 25-04-2016 IPR002696 Putative membrane protein insertion efficiency factor SMA_RS08290 87dd96caeb91465c2104e31fa1c1e10e 86 Pfam PF01809 Haemolytic domain 2 67 4.6E-26 T 25-04-2016 IPR002696 Putative membrane protein insertion efficiency factor SMA_RS08290 87dd96caeb91465c2104e31fa1c1e10e 86 ProDom PD004225 UPF0161 ALPHA-HEMOLYSIN YIDD UNCHARACTERIZED CYTOSOLIC PRECURSOR SIGNAL YTJA RNPA SIMILAR 16 67 3.0E-20 T 25-04-2016 IPR002696 Putative membrane protein insertion efficiency factor SMA_RS08290 87dd96caeb91465c2104e31fa1c1e10e 86 PANTHER PTHR33383 1 76 6.8E-34 T 25-04-2016 SMA_RS08290 87dd96caeb91465c2104e31fa1c1e10e 86 SMART SM01234 1 67 9.6E-38 T 25-04-2016 IPR002696 Putative membrane protein insertion efficiency factor SMA_RS04910 496c0689960dfbc7a41fb1025031d000 520 Pfam PF02540 NAD synthase 218 252 4.2E-7 T 25-04-2016 IPR022310 NAD/GMP synthase SMA_RS04910 496c0689960dfbc7a41fb1025031d000 520 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 13 27 2.8E-6 T 25-04-2016 SMA_RS04910 496c0689960dfbc7a41fb1025031d000 520 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 54 68 2.8E-6 T 25-04-2016 SMA_RS04910 496c0689960dfbc7a41fb1025031d000 520 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 84 100 2.8E-6 T 25-04-2016 SMA_RS04910 496c0689960dfbc7a41fb1025031d000 520 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 10 520 54.095 T 25-04-2016 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 SMA_RS04910 496c0689960dfbc7a41fb1025031d000 520 SUPERFAMILY SSF52317 11 208 9.0E-54 T 25-04-2016 IPR029062 Class I glutamine amidotransferase-like SMA_RS04910 496c0689960dfbc7a41fb1025031d000 520 PRINTS PR00096 Glutamine amidotransferase superfamily signature 175 188 1.2E-7 T 25-04-2016 SMA_RS04910 496c0689960dfbc7a41fb1025031d000 520 PRINTS PR00096 Glutamine amidotransferase superfamily signature 84 95 1.2E-7 T 25-04-2016 SMA_RS04910 496c0689960dfbc7a41fb1025031d000 520 PRINTS PR00096 Glutamine amidotransferase superfamily signature 57 66 1.2E-7 T 25-04-2016 SMA_RS04910 496c0689960dfbc7a41fb1025031d000 520 Pfam PF00958 GMP synthase C terminal domain 428 519 5.8E-44 T 25-04-2016 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 SMA_RS04910 496c0689960dfbc7a41fb1025031d000 520 SUPERFAMILY SSF54810 400 520 2.62E-50 T 25-04-2016 SMA_RS04910 496c0689960dfbc7a41fb1025031d000 520 PANTHER PTHR11922 1 517 3.1E-288 T 25-04-2016 SMA_RS04910 496c0689960dfbc7a41fb1025031d000 520 PANTHER PTHR11922:SF2 1 517 3.1E-288 T 25-04-2016 SMA_RS04910 496c0689960dfbc7a41fb1025031d000 520 PRINTS PR00097 Anthranilate synthase component II signature 57 66 8.7E-6 T 25-04-2016 SMA_RS04910 496c0689960dfbc7a41fb1025031d000 520 PRINTS PR00097 Anthranilate synthase component II signature 84 95 8.7E-6 T 25-04-2016 SMA_RS04910 496c0689960dfbc7a41fb1025031d000 520 PRINTS PR00097 Anthranilate synthase component II signature 175 188 8.7E-6 T 25-04-2016 SMA_RS04910 496c0689960dfbc7a41fb1025031d000 520 Gene3D G3DSA:3.40.50.880 9 220 5.9E-64 T 25-04-2016 IPR029062 Class I glutamine amidotransferase-like SMA_RS04910 496c0689960dfbc7a41fb1025031d000 520 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 211 520 7.3E-153 T 25-04-2016 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 SMA_RS04910 496c0689960dfbc7a41fb1025031d000 520 Pfam PF00117 Glutamine amidotransferase class-I 15 198 1.9E-42 T 25-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 SMA_RS04910 496c0689960dfbc7a41fb1025031d000 520 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 13 202 6.4E-74 T 25-04-2016 IPR004739 GMP synthase, N-terminal GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 SMA_RS04910 496c0689960dfbc7a41fb1025031d000 520 Gene3D G3DSA:3.30.300.10 396 520 5.7E-51 T 25-04-2016 SMA_RS04910 496c0689960dfbc7a41fb1025031d000 520 SUPERFAMILY SSF52402 195 413 9.48E-60 T 25-04-2016 SMA_RS04910 496c0689960dfbc7a41fb1025031d000 520 Gene3D G3DSA:3.40.50.620 221 395 1.4E-58 T 25-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SMA_RS04880 9485e95561f0dcca4a3a25eb6cd05a01 200 SUPERFAMILY SSF53955 33 149 3.19E-11 T 25-04-2016 IPR023346 Lysozyme-like domain SMA_RS04880 9485e95561f0dcca4a3a25eb6cd05a01 200 PANTHER PTHR34135 1 200 8.3E-58 T 25-04-2016 SMA_RS04880 9485e95561f0dcca4a3a25eb6cd05a01 200 Pfam PF13702 Lysozyme-like 29 190 5.5E-58 T 25-04-2016 SMA_RS04880 9485e95561f0dcca4a3a25eb6cd05a01 200 PANTHER PTHR34135:SF3 1 200 8.3E-58 T 25-04-2016 SMA_RS04880 9485e95561f0dcca4a3a25eb6cd05a01 200 Gene3D G3DSA:1.10.530.10 30 149 9.7E-5 T 25-04-2016 SMA_RS04305 bd446bfe9464de9bf745f0106a5c8d6f 457 Gene3D G3DSA:3.30.1360.120 2 127 3.5E-45 T 25-04-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 SMA_RS04305 bd446bfe9464de9bf745f0106a5c8d6f 457 PANTHER PTHR11649 10 457 8.0E-162 T 25-04-2016 SMA_RS04305 bd446bfe9464de9bf745f0106a5c8d6f 457 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 14 457 7.5E-131 T 25-04-2016 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 SMA_RS04305 bd446bfe9464de9bf745f0106a5c8d6f 457 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 7 457 34.043 T 25-04-2016 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 SMA_RS04305 bd446bfe9464de9bf745f0106a5c8d6f 457 Gene3D G3DSA:1.20.120.430 128 188 3.3E-55 T 25-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 SMA_RS04305 bd446bfe9464de9bf745f0106a5c8d6f 457 Gene3D G3DSA:1.20.120.430 254 278 3.3E-55 T 25-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 SMA_RS04305 bd446bfe9464de9bf745f0106a5c8d6f 457 Gene3D G3DSA:1.20.120.430 387 457 3.3E-55 T 25-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 SMA_RS04305 bd446bfe9464de9bf745f0106a5c8d6f 457 Pfam PF12631 MnmE helical domain 129 454 7.1E-58 T 25-04-2016 IPR025867 MnmE, helical domain SMA_RS04305 bd446bfe9464de9bf745f0106a5c8d6f 457 SUPERFAMILY SSF103025 6 126 1.73E-39 T 25-04-2016 SMA_RS04305 bd446bfe9464de9bf745f0106a5c8d6f 457 Gene3D G3DSA:3.40.50.300 293 386 2.7E-12 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS04305 bd446bfe9464de9bf745f0106a5c8d6f 457 Gene3D G3DSA:3.40.50.300 223 253 5.7E-5 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS04305 bd446bfe9464de9bf745f0106a5c8d6f 457 SUPERFAMILY SSF116878 128 227 1.44E-49 T 25-04-2016 SMA_RS04305 bd446bfe9464de9bf745f0106a5c8d6f 457 SUPERFAMILY SSF116878 382 457 1.44E-49 T 25-04-2016 SMA_RS04305 bd446bfe9464de9bf745f0106a5c8d6f 457 Pfam PF01926 50S ribosome-binding GTPase 227 338 5.1E-26 T 25-04-2016 IPR006073 GTP binding domain GO:0005525 SMA_RS04305 bd446bfe9464de9bf745f0106a5c8d6f 457 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 227 366 3.6E-26 T 25-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 SMA_RS04305 bd446bfe9464de9bf745f0106a5c8d6f 457 SUPERFAMILY SSF52540 99 169 3.74E-47 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS04305 bd446bfe9464de9bf745f0106a5c8d6f 457 SUPERFAMILY SSF52540 204 372 3.74E-47 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS04305 bd446bfe9464de9bf745f0106a5c8d6f 457 PANTHER PTHR11649:SF56 10 457 8.0E-162 T 25-04-2016 SMA_RS04305 bd446bfe9464de9bf745f0106a5c8d6f 457 Pfam PF10396 GTP-binding protein TrmE N-terminus 8 126 5.2E-40 T 25-04-2016 IPR018948 GTP-binding protein TrmE, N-terminal SMA_RS02950 4f03f451f91da077046bb0407b00a1bc 446 Hamap MF_00221 Divalent metal cation transporter MntH [mntH]. 21 446 34.193 T 25-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 SMA_RS02950 4f03f451f91da077046bb0407b00a1bc 446 TIGRFAM TIGR01197 nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 30 414 2.4E-98 T 25-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 SMA_RS02950 4f03f451f91da077046bb0407b00a1bc 446 PANTHER PTHR11706:SF33 2 446 2.2E-157 T 25-04-2016 SMA_RS02950 4f03f451f91da077046bb0407b00a1bc 446 PRINTS PR00447 Natural resistance-associated macrophage protein signature 356 373 1.1E-47 T 25-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 SMA_RS02950 4f03f451f91da077046bb0407b00a1bc 446 PRINTS PR00447 Natural resistance-associated macrophage protein signature 109 135 1.1E-47 T 25-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 SMA_RS02950 4f03f451f91da077046bb0407b00a1bc 446 PRINTS PR00447 Natural resistance-associated macrophage protein signature 137 156 1.1E-47 T 25-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 SMA_RS02950 4f03f451f91da077046bb0407b00a1bc 446 PRINTS PR00447 Natural resistance-associated macrophage protein signature 328 347 1.1E-47 T 25-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 SMA_RS02950 4f03f451f91da077046bb0407b00a1bc 446 PRINTS PR00447 Natural resistance-associated macrophage protein signature 219 242 1.1E-47 T 25-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 SMA_RS02950 4f03f451f91da077046bb0407b00a1bc 446 PRINTS PR00447 Natural resistance-associated macrophage protein signature 390 409 1.1E-47 T 25-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 SMA_RS02950 4f03f451f91da077046bb0407b00a1bc 446 Pfam PF01566 Natural resistance-associated macrophage protein 50 420 1.9E-108 T 25-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 SMA_RS02950 4f03f451f91da077046bb0407b00a1bc 446 PANTHER PTHR11706 2 446 2.2E-157 T 25-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 SMA_RS03100 525838e74d0c6abe2e46d5b41cc613ef 228 Gene3D G3DSA:1.10.3720.10 11 222 2.5E-49 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SMA_RS03100 525838e74d0c6abe2e46d5b41cc613ef 228 PANTHER PTHR30614:SF15 1 228 6.7E-89 T 25-04-2016 SMA_RS03100 525838e74d0c6abe2e46d5b41cc613ef 228 PANTHER PTHR30614 1 228 6.7E-89 T 25-04-2016 SMA_RS03100 525838e74d0c6abe2e46d5b41cc613ef 228 SUPERFAMILY SSF161098 12 208 2.22E-42 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SMA_RS03100 525838e74d0c6abe2e46d5b41cc613ef 228 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 31 222 4.9E-24 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SMA_RS03100 525838e74d0c6abe2e46d5b41cc613ef 228 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 12 117 2.6E-18 T 25-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 SMA_RS02380 d6fada581bb56b797074cbcaf9ab4e6c 274 PANTHER PTHR18966:SF191 30 268 2.7E-15 T 25-04-2016 SMA_RS02380 d6fada581bb56b797074cbcaf9ab4e6c 274 Gene3D G3DSA:3.40.190.10 111 213 1.1E-19 T 25-04-2016 SMA_RS02380 d6fada581bb56b797074cbcaf9ab4e6c 274 SUPERFAMILY SSF53850 1 268 1.28E-43 T 25-04-2016 SMA_RS02380 d6fada581bb56b797074cbcaf9ab4e6c 274 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 34 266 7.5E-44 T 25-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SMA_RS02380 d6fada581bb56b797074cbcaf9ab4e6c 274 PANTHER PTHR18966 30 268 2.7E-15 T 25-04-2016 SMA_RS02380 d6fada581bb56b797074cbcaf9ab4e6c 274 SMART SM00062 33 268 3.6E-36 T 25-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SMA_RS02380 d6fada581bb56b797074cbcaf9ab4e6c 274 Gene3D G3DSA:3.40.190.10 224 269 1.3E-28 T 25-04-2016 SMA_RS02380 d6fada581bb56b797074cbcaf9ab4e6c 274 Gene3D G3DSA:3.40.190.10 32 110 1.3E-28 T 25-04-2016 SMA_RS02035 1041ecf86501edf823c09c2d907c60d1 324 PANTHER PTHR18919:SF109 27 323 6.9E-113 T 25-04-2016 SMA_RS02035 1041ecf86501edf823c09c2d907c60d1 324 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 234 324 1.7E-31 T 25-04-2016 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 SMA_RS02035 1041ecf86501edf823c09c2d907c60d1 324 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 106 183 3.6E-29 T 25-04-2016 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 SMA_RS02035 1041ecf86501edf823c09c2d907c60d1 324 Gene3D G3DSA:3.40.47.10 161 323 1.5E-44 T 25-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SMA_RS02035 1041ecf86501edf823c09c2d907c60d1 324 PANTHER PTHR18919 27 323 6.9E-113 T 25-04-2016 SMA_RS02035 1041ecf86501edf823c09c2d907c60d1 324 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 2 324 66.875 T 25-04-2016 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 SMA_RS02035 1041ecf86501edf823c09c2d907c60d1 324 Gene3D G3DSA:3.40.47.10 5 160 9.9E-60 T 25-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SMA_RS02035 1041ecf86501edf823c09c2d907c60d1 324 SUPERFAMILY SSF53901 4 323 5.61E-63 T 25-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SMA_RS02035 1041ecf86501edf823c09c2d907c60d1 324 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 4 323 2.7E-106 T 25-04-2016 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 SMA_RS09500 535ec36d7710a1a314a79c7233618a64 705 SUPERFAMILY SSF81665 169 207 9.81E-11 T 25-04-2016 SMA_RS09500 535ec36d7710a1a314a79c7233618a64 705 SUPERFAMILY SSF81665 305 394 9.81E-11 T 25-04-2016 SMA_RS09500 535ec36d7710a1a314a79c7233618a64 705 PANTHER PTHR24093 1 701 6.2E-203 T 25-04-2016 SMA_RS09500 535ec36d7710a1a314a79c7233618a64 705 Pfam PF00702 haloacid dehalogenase-like hydrolase 400 606 4.1E-31 T 25-04-2016 SMA_RS09500 535ec36d7710a1a314a79c7233618a64 705 SUPERFAMILY SSF56784 402 421 3.71E-48 T 25-04-2016 IPR023214 HAD-like domain SMA_RS09500 535ec36d7710a1a314a79c7233618a64 705 SUPERFAMILY SSF56784 461 698 3.71E-48 T 25-04-2016 IPR023214 HAD-like domain SMA_RS09500 535ec36d7710a1a314a79c7233618a64 705 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 615 627 1.6E-23 T 25-04-2016 SMA_RS09500 535ec36d7710a1a314a79c7233618a64 705 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 254 268 1.6E-23 T 25-04-2016 SMA_RS09500 535ec36d7710a1a314a79c7233618a64 705 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 592 611 1.6E-23 T 25-04-2016 SMA_RS09500 535ec36d7710a1a314a79c7233618a64 705 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 540 550 1.6E-23 T 25-04-2016 SMA_RS09500 535ec36d7710a1a314a79c7233618a64 705 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 403 417 1.6E-23 T 25-04-2016 SMA_RS09500 535ec36d7710a1a314a79c7233618a64 705 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 137 700 6.1E-165 T 25-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 SMA_RS09500 535ec36d7710a1a314a79c7233618a64 705 Gene3D G3DSA:3.40.1110.10 422 519 1.8E-5 T 25-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 SMA_RS09500 535ec36d7710a1a314a79c7233618a64 705 PANTHER PTHR24093:SF332 1 701 6.2E-203 T 25-04-2016 SMA_RS09500 535ec36d7710a1a314a79c7233618a64 705 PRINTS PR00943 Copper-transporting ATPase signature 193 211 1.3E-8 T 25-04-2016 SMA_RS09500 535ec36d7710a1a314a79c7233618a64 705 PRINTS PR00943 Copper-transporting ATPase signature 327 341 1.3E-8 T 25-04-2016 SMA_RS09500 535ec36d7710a1a314a79c7233618a64 705 PRINTS PR00943 Copper-transporting ATPase signature 569 586 1.3E-8 T 25-04-2016 SMA_RS09500 535ec36d7710a1a314a79c7233618a64 705 PRINTS PR00943 Copper-transporting ATPase signature 122 141 1.3E-8 T 25-04-2016 SMA_RS09500 535ec36d7710a1a314a79c7233618a64 705 PRINTS PR00943 Copper-transporting ATPase signature 665 679 1.3E-8 T 25-04-2016 SMA_RS09500 535ec36d7710a1a314a79c7233618a64 705 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 119 701 9.3E-189 T 25-04-2016 SMA_RS09500 535ec36d7710a1a314a79c7233618a64 705 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 176 671 2.8E-81 T 25-04-2016 IPR001757 P-type ATPase GO:0016021 SMA_RS09500 535ec36d7710a1a314a79c7233618a64 705 Pfam PF00122 E1-E2 ATPase 175 394 6.1E-56 T 25-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 SMA_RS09500 535ec36d7710a1a314a79c7233618a64 705 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 162 700 4.8E-109 T 25-04-2016 SMA_RS09500 535ec36d7710a1a314a79c7233618a64 705 Gene3D G3DSA:3.40.50.1000 377 419 3.0E-42 T 25-04-2016 IPR023214 HAD-like domain SMA_RS09500 535ec36d7710a1a314a79c7233618a64 705 Gene3D G3DSA:3.40.50.1000 520 660 3.0E-42 T 25-04-2016 IPR023214 HAD-like domain SMA_RS09500 535ec36d7710a1a314a79c7233618a64 705 SUPERFAMILY SSF81653 210 303 7.19E-24 T 25-04-2016 SMA_RS09500 535ec36d7710a1a314a79c7233618a64 705 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 405 411 - T 25-04-2016 IPR018303 P-type ATPase, phosphorylation site SMA_RS09500 535ec36d7710a1a314a79c7233618a64 705 Gene3D G3DSA:2.70.150.10 168 304 5.6E-27 T 25-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 SMA_RS04960 673320cc15ce0c6ee5ba1f6dc14e0c8a 410 SUPERFAMILY SSF56349 74 367 2.5E-50 T 25-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 SMA_RS04960 673320cc15ce0c6ee5ba1f6dc14e0c8a 410 Pfam PF14659 Phage integrase, N-terminal SAM-like domain 75 129 6.2E-5 T 25-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 SMA_RS04960 673320cc15ce0c6ee5ba1f6dc14e0c8a 410 PANTHER PTHR30349 8 396 2.8E-48 T 25-04-2016 SMA_RS04960 673320cc15ce0c6ee5ba1f6dc14e0c8a 410 Gene3D G3DSA:1.10.443.10 184 367 2.3E-32 T 25-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 SMA_RS04960 673320cc15ce0c6ee5ba1f6dc14e0c8a 410 PANTHER PTHR30349:SF35 8 396 2.8E-48 T 25-04-2016 SMA_RS04960 673320cc15ce0c6ee5ba1f6dc14e0c8a 410 Pfam PF00589 Phage integrase family 186 366 1.1E-20 T 25-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 SMA_RS04960 673320cc15ce0c6ee5ba1f6dc14e0c8a 410 Gene3D G3DSA:1.10.150.130 75 176 3.3E-10 T 25-04-2016 IPR023109 Integrase/recombinase, N-terminal SMA_RS02815 cff7ad6f4d1bd7b4bf2c08f751428da8 179 PIRSF PIRSF004553 1 179 2.9E-53 T 25-04-2016 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SMA_RS02815 cff7ad6f4d1bd7b4bf2c08f751428da8 179 PANTHER PTHR18895 14 179 3.1E-43 T 25-04-2016 SMA_RS02815 cff7ad6f4d1bd7b4bf2c08f751428da8 179 Pfam PF03602 Conserved hypothetical protein 95 1 177 1.2E-60 T 25-04-2016 SMA_RS02815 cff7ad6f4d1bd7b4bf2c08f751428da8 179 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 2 178 7.1E-50 T 25-04-2016 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SMA_RS02815 cff7ad6f4d1bd7b4bf2c08f751428da8 179 Gene3D G3DSA:3.40.50.150 1 179 1.6E-58 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMA_RS02815 cff7ad6f4d1bd7b4bf2c08f751428da8 179 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 114 120 - T 25-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 SMA_RS02815 cff7ad6f4d1bd7b4bf2c08f751428da8 179 PANTHER PTHR18895:SF60 14 179 3.1E-43 T 25-04-2016 SMA_RS02815 cff7ad6f4d1bd7b4bf2c08f751428da8 179 SUPERFAMILY SSF53335 1 178 1.66E-47 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMA_RS09890 3d06be0a2da3b313d596d0d61988c377 304 SUPERFAMILY SSF53448 1 272 6.53E-66 T 25-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SMA_RS09890 3d06be0a2da3b313d596d0d61988c377 304 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 4 268 6.4E-110 T 25-04-2016 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343 SMA_RS09890 3d06be0a2da3b313d596d0d61988c377 304 PANTHER PTHR22572 6 290 3.2E-109 T 25-04-2016 SMA_RS09890 3d06be0a2da3b313d596d0d61988c377 304 PANTHER PTHR22572:SF14 6 290 3.2E-109 T 25-04-2016 SMA_RS09890 3d06be0a2da3b313d596d0d61988c377 304 Gene3D G3DSA:3.90.550.10 5 278 2.7E-70 T 25-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SMA_RS09890 3d06be0a2da3b313d596d0d61988c377 304 Pfam PF00483 Nucleotidyl transferase 6 267 6.3E-32 T 25-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 SMA_RS06325 a88bf8a23c30daad33f59bcad24d3764 225 SUPERFAMILY SSF51569 1 222 2.12E-63 T 25-04-2016 SMA_RS06325 a88bf8a23c30daad33f59bcad24d3764 225 Hamap MF_00214 3-dehydroquinate dehydratase [aroD]. 2 222 35.823 T 25-04-2016 IPR001381 3-dehydroquinate dehydratase type I GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 SMA_RS06325 a88bf8a23c30daad33f59bcad24d3764 225 Gene3D G3DSA:3.20.20.70 1 223 6.2E-70 T 25-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SMA_RS06325 a88bf8a23c30daad33f59bcad24d3764 225 TIGRFAM TIGR01093 aroD: 3-dehydroquinate dehydratase, type I 2 218 1.5E-47 T 25-04-2016 IPR001381 3-dehydroquinate dehydratase type I GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 SMA_RS06325 a88bf8a23c30daad33f59bcad24d3764 225 Pfam PF01487 Type I 3-dehydroquinase 5 218 1.1E-51 T 25-04-2016 IPR001381 3-dehydroquinate dehydratase type I GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 SMA_RS06325 a88bf8a23c30daad33f59bcad24d3764 225 PANTHER PTHR21089:SF5 1 223 5.7E-76 T 25-04-2016 SMA_RS06325 a88bf8a23c30daad33f59bcad24d3764 225 PANTHER PTHR21089 1 223 5.7E-76 T 25-04-2016 SMA_RS06985 ed270501c50a6c004f092eb663d2f5e8 193 Pfam PF02517 CAAX protease self-immunity 101 185 8.0E-12 T 25-04-2016 IPR003675 CAAX amino terminal protease GO:0016020 SMA_RS01660 17d034708c709e3b2a9082dae0447ab1 311 PANTHER PTHR12277:SF68 76 309 4.8E-81 T 25-04-2016 SMA_RS01660 17d034708c709e3b2a9082dae0447ab1 311 Gene3D G3DSA:3.40.50.1820 62 309 1.9E-47 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMA_RS01660 17d034708c709e3b2a9082dae0447ab1 311 PANTHER PTHR12277 76 309 4.8E-81 T 25-04-2016 SMA_RS01660 17d034708c709e3b2a9082dae0447ab1 311 SUPERFAMILY SSF53474 67 199 1.88E-39 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMA_RS01660 17d034708c709e3b2a9082dae0447ab1 311 SUPERFAMILY SSF53474 238 309 1.88E-39 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMA_RS01660 17d034708c709e3b2a9082dae0447ab1 311 Pfam PF12146 Serine aminopeptidase, S33 89 178 2.1E-8 T 25-04-2016 IPR022742 Serine aminopeptidase, S33 SMA_RS05895 21964ceb73e3e934151d630d6a408062 230 Gene3D G3DSA:1.10.3720.10 14 225 3.1E-37 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SMA_RS05895 21964ceb73e3e934151d630d6a408062 230 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 13 118 6.0E-15 T 25-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 SMA_RS05895 21964ceb73e3e934151d630d6a408062 230 SUPERFAMILY SSF161098 14 211 8.76E-35 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SMA_RS05895 21964ceb73e3e934151d630d6a408062 230 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 34 218 9.9E-17 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SMA_RS05895 21964ceb73e3e934151d630d6a408062 230 PANTHER PTHR30614 1 229 1.2E-56 T 25-04-2016 SMA_RS06370 2352abb415ef89b3438a0cd4b2f78899 226 Hamap MF_00238 Cytidylate kinase [cmk]. 4 223 33.782 T 25-04-2016 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 SMA_RS06370 2352abb415ef89b3438a0cd4b2f78899 226 Pfam PF02224 Cytidylate kinase 6 220 2.5E-75 T 25-04-2016 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 SMA_RS06370 2352abb415ef89b3438a0cd4b2f78899 226 SUPERFAMILY SSF52540 1 220 7.34E-47 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS06370 2352abb415ef89b3438a0cd4b2f78899 226 Gene3D G3DSA:3.40.50.300 3 219 4.9E-74 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS06370 2352abb415ef89b3438a0cd4b2f78899 226 TIGRFAM TIGR00017 cmk: cytidylate kinase 4 218 1.4E-77 T 25-04-2016 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 SMA_RS06370 2352abb415ef89b3438a0cd4b2f78899 226 PANTHER PTHR21299 6 226 2.8E-70 T 25-04-2016 SMA_RS02480 cb7fc2026bf5585b04109d14c24ad25e 104 SUPERFAMILY SSF63562 2 79 2.96E-22 T 25-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SMA_RS02480 cb7fc2026bf5585b04109d14c24ad25e 104 Pfam PF01192 RNA polymerase Rpb6 10 59 2.4E-9 T 25-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SMA_RS02480 cb7fc2026bf5585b04109d14c24ad25e 104 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 2 62 14.1 T 25-04-2016 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SMA_RS02480 cb7fc2026bf5585b04109d14c24ad25e 104 PANTHER PTHR34476 3 91 1.8E-19 T 25-04-2016 SMA_RS02480 cb7fc2026bf5585b04109d14c24ad25e 104 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 2 59 8.7E-13 T 25-04-2016 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SMA_RS02480 cb7fc2026bf5585b04109d14c24ad25e 104 SMART SM01409 9 61 1.2E-10 T 25-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SMA_RS02480 cb7fc2026bf5585b04109d14c24ad25e 104 Gene3D G3DSA:3.90.940.10 2 84 2.2E-23 T 25-04-2016 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SMA_RS03160 d97734df00d18c90bcc502b00231e8a0 274 SUPERFAMILY SSF53335 61 254 2.38E-23 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMA_RS03160 d97734df00d18c90bcc502b00231e8a0 274 PANTHER PTHR32319:SF0 1 266 1.2E-125 T 25-04-2016 SMA_RS03160 d97734df00d18c90bcc502b00231e8a0 274 SMART SM00363 4 71 1.3E-5 T 25-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SMA_RS03160 d97734df00d18c90bcc502b00231e8a0 274 Gene3D G3DSA:3.10.290.10 4 93 6.9E-20 T 25-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SMA_RS03160 d97734df00d18c90bcc502b00231e8a0 274 Pfam PF01728 FtsJ-like methyltransferase 62 245 1.3E-21 T 25-04-2016 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 SMA_RS03160 d97734df00d18c90bcc502b00231e8a0 274 Pfam PF01479 S4 domain 4 52 5.5E-6 T 25-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SMA_RS03160 d97734df00d18c90bcc502b00231e8a0 274 SUPERFAMILY SSF55174 3 71 1.91E-9 T 25-04-2016 SMA_RS03160 d97734df00d18c90bcc502b00231e8a0 274 PANTHER PTHR32319 1 266 1.2E-125 T 25-04-2016 SMA_RS03160 d97734df00d18c90bcc502b00231e8a0 274 PIRSF PIRSF005578 1 267 1.1E-98 T 25-04-2016 IPR004538 Haemolysin A /rRNA methyltransferase TlyA GO:0003723 SMA_RS03160 d97734df00d18c90bcc502b00231e8a0 274 TIGRFAM TIGR00478 tly: TlyA family rRNA methyltransferase/putative hemolysin 5 239 8.7E-80 T 25-04-2016 IPR004538 Haemolysin A /rRNA methyltransferase TlyA GO:0003723 SMA_RS03160 d97734df00d18c90bcc502b00231e8a0 274 Gene3D G3DSA:3.40.50.150 94 215 2.9E-4 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMA_RS02930 ec3695f428bb2719641542666f35193f 255 PANTHER PTHR22854:SF2 3 250 1.7E-86 T 25-04-2016 SMA_RS02930 ec3695f428bb2719641542666f35193f 255 Gene3D G3DSA:3.20.20.70 5 250 8.1E-85 T 25-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SMA_RS02930 ec3695f428bb2719641542666f35193f 255 Pfam PF00218 Indole-3-glycerol phosphate synthase 9 250 2.8E-82 T 25-04-2016 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 SMA_RS02930 ec3695f428bb2719641542666f35193f 255 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 4 252 31.179 T 25-04-2016 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 SMA_RS02930 ec3695f428bb2719641542666f35193f 255 PANTHER PTHR22854 3 250 1.7E-86 T 25-04-2016 SMA_RS02930 ec3695f428bb2719641542666f35193f 255 SUPERFAMILY SSF51366 9 251 1.29E-73 T 25-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 SMA_RS02930 ec3695f428bb2719641542666f35193f 255 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 47 65 - T 25-04-2016 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 SMA_RS07265 cf491c1c3590801b7024f4b6c39d8727 92 PANTHER PTHR38041 1 90 3.2E-18 T 25-04-2016 SMA_RS07265 cf491c1c3590801b7024f4b6c39d8727 92 Gene3D G3DSA:1.20.59.10 1 84 6.8E-24 T 25-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 SMA_RS07265 cf491c1c3590801b7024f4b6c39d8727 92 SMART SM00830 7 86 3.8E-24 T 25-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 SMA_RS07265 cf491c1c3590801b7024f4b6c39d8727 92 Pfam PF01817 Chorismate mutase type II 7 83 2.6E-21 T 25-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 SMA_RS07265 cf491c1c3590801b7024f4b6c39d8727 92 TIGRFAM TIGR01805 CM_mono_grmpos: chorismate mutase 3 83 1.0E-29 T 25-04-2016 IPR011279 Chorismate mutase, Gram-positive SMA_RS07265 cf491c1c3590801b7024f4b6c39d8727 92 SUPERFAMILY SSF48600 1 85 1.3E-20 T 25-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 SMA_RS07785 0f555cffb091342d4c8afd4867d6c597 781 ProSitePatterns PS01175 Ribonuclease II family signature. 548 572 - T 25-04-2016 IPR022966 Ribonuclease II/R, conserved site SMA_RS07785 0f555cffb091342d4c8afd4867d6c597 781 SUPERFAMILY SSF50249 213 625 2.01E-142 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMA_RS07785 0f555cffb091342d4c8afd4867d6c597 781 SUPERFAMILY SSF50249 126 229 2.16E-9 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMA_RS07785 0f555cffb091342d4c8afd4867d6c597 781 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 63 707 5.0E-189 T 25-04-2016 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 SMA_RS07785 0f555cffb091342d4c8afd4867d6c597 781 SUPERFAMILY SSF50249 628 706 2.16E-16 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMA_RS07785 0f555cffb091342d4c8afd4867d6c597 781 SMART SM00955 252 581 1.4E-173 T 25-04-2016 SMA_RS07785 0f555cffb091342d4c8afd4867d6c597 781 SMART SM00316 626 707 5.1E-13 T 25-04-2016 IPR022967 RNA-binding domain, S1 SMA_RS07785 0f555cffb091342d4c8afd4867d6c597 781 Gene3D G3DSA:2.40.50.140 628 720 1.1E-17 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMA_RS07785 0f555cffb091342d4c8afd4867d6c597 781 PANTHER PTHR23355:SF9 2 780 9.1E-231 T 25-04-2016 SMA_RS07785 0f555cffb091342d4c8afd4867d6c597 781 Hamap MF_01895 Ribonuclease R [rnr]. 18 707 54.691 T 25-04-2016 IPR011805 Ribonuclease R GO:0003723|GO:0004518 SMA_RS07785 0f555cffb091342d4c8afd4867d6c597 781 TIGRFAM TIGR02063 RNase_R: ribonuclease R 2 707 4.6E-246 T 25-04-2016 IPR011805 Ribonuclease R GO:0003723|GO:0004518 SMA_RS07785 0f555cffb091342d4c8afd4867d6c597 781 Pfam PF00773 RNB domain 252 579 1.7E-114 T 25-04-2016 SMA_RS07785 0f555cffb091342d4c8afd4867d6c597 781 SUPERFAMILY SSF50249 65 135 1.54E-9 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMA_RS07785 0f555cffb091342d4c8afd4867d6c597 781 Pfam PF00575 S1 RNA binding domain 627 705 1.5E-12 T 25-04-2016 IPR003029 S1 domain GO:0003676 SMA_RS07785 0f555cffb091342d4c8afd4867d6c597 781 PANTHER PTHR23355 2 780 9.1E-231 T 25-04-2016 SMA_RS07785 0f555cffb091342d4c8afd4867d6c597 781 Pfam PF08206 Ribonuclease B OB domain 72 129 7.1E-15 T 25-04-2016 IPR013223 Ribonuclease B, N-terminal OB domain SMA_RS10010 6eefd75e1c92b8458e15ef716dae20f0 430 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 430 212.26 T 25-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 SMA_RS10010 6eefd75e1c92b8458e15ef716dae20f0 430 SMART SM00788 3 422 4.7E-293 T 25-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 SMA_RS10010 6eefd75e1c92b8458e15ef716dae20f0 430 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 131 142 - T 25-04-2016 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|UniPathway: UPA00075 SMA_RS10010 6eefd75e1c92b8458e15ef716dae20f0 430 Pfam PF00709 Adenylosuccinate synthetase 4 420 3.6E-181 T 25-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 SMA_RS10010 6eefd75e1c92b8458e15ef716dae20f0 430 SUPERFAMILY SSF52540 1 427 9.56E-177 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS10010 6eefd75e1c92b8458e15ef716dae20f0 430 Gene3D G3DSA:3.90.170.10 265 423 3.8E-70 T 25-04-2016 SMA_RS10010 6eefd75e1c92b8458e15ef716dae20f0 430 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 10 17 - T 25-04-2016 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 SMA_RS10010 6eefd75e1c92b8458e15ef716dae20f0 430 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 5 425 6.1E-189 T 25-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 SMA_RS10010 6eefd75e1c92b8458e15ef716dae20f0 430 PANTHER PTHR11846 4 426 1.5E-252 T 25-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 SMA_RS10010 6eefd75e1c92b8458e15ef716dae20f0 430 Gene3D G3DSA:3.40.440.10 1 93 2.1E-71 T 25-04-2016 SMA_RS10010 6eefd75e1c92b8458e15ef716dae20f0 430 Gene3D G3DSA:3.40.440.10 195 264 2.1E-71 T 25-04-2016 SMA_RS10010 6eefd75e1c92b8458e15ef716dae20f0 430 Gene3D G3DSA:1.10.300.10 100 194 8.7E-39 T 25-04-2016 SMA_RS08090 d94606fced737c76caf43b6b21b3eada 294 Gene3D G3DSA:1.10.3470.10 45 210 7.1E-6 T 25-04-2016 IPR029022 ABC transporter, BtuC-like SMA_RS08090 d94606fced737c76caf43b6b21b3eada 294 Pfam PF02653 Branched-chain amino acid transport system / permease component 10 278 6.4E-49 T 25-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 SMA_RS08090 d94606fced737c76caf43b6b21b3eada 294 PANTHER PTHR11795:SF371 1 294 1.5E-133 T 25-04-2016 SMA_RS08090 d94606fced737c76caf43b6b21b3eada 294 PANTHER PTHR11795 1 294 1.5E-133 T 25-04-2016 SMA_RS05035 099b99dc229f4c267d8dade72ece9a21 521 TIGRFAM TIGR00959 ffh: signal recognition particle protein 3 428 3.7E-190 T 25-04-2016 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 SMA_RS05035 099b99dc229f4c267d8dade72ece9a21 521 SUPERFAMILY SSF52540 43 355 4.78E-59 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS05035 099b99dc229f4c267d8dade72ece9a21 521 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 6 488 34.129 T 25-04-2016 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 SMA_RS05035 099b99dc229f4c267d8dade72ece9a21 521 Gene3D G3DSA:1.20.120.140 3 90 6.6E-34 T 25-04-2016 SMA_RS05035 099b99dc229f4c267d8dade72ece9a21 521 SMART SM00963 2 87 8.4E-32 T 25-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 SMA_RS05035 099b99dc229f4c267d8dade72ece9a21 521 SMART SM00962 101 297 3.7E-112 T 25-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 SMA_RS05035 099b99dc229f4c267d8dade72ece9a21 521 Pfam PF00448 SRP54-type protein, GTPase domain 101 297 7.8E-76 T 25-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 SMA_RS05035 099b99dc229f4c267d8dade72ece9a21 521 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 270 283 - T 25-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 SMA_RS05035 099b99dc229f4c267d8dade72ece9a21 521 PANTHER PTHR11564:SF7 1 435 9.9E-255 T 25-04-2016 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 SMA_RS05035 099b99dc229f4c267d8dade72ece9a21 521 Pfam PF02978 Signal peptide binding domain 328 427 7.5E-32 T 25-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 SMA_RS05035 099b99dc229f4c267d8dade72ece9a21 521 PANTHER PTHR11564 1 435 9.9E-255 T 25-04-2016 SMA_RS05035 099b99dc229f4c267d8dade72ece9a21 521 SUPERFAMILY SSF47446 328 429 1.64E-35 T 25-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 SMA_RS05035 099b99dc229f4c267d8dade72ece9a21 521 Gene3D G3DSA:3.40.50.300 98 298 2.5E-74 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS05035 099b99dc229f4c267d8dade72ece9a21 521 Pfam PF02881 SRP54-type protein, helical bundle domain 6 83 3.4E-22 T 25-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 SMA_RS05035 099b99dc229f4c267d8dade72ece9a21 521 Gene3D G3DSA:1.10.260.30 328 430 2.7E-38 T 25-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 SMA_RS05035 099b99dc229f4c267d8dade72ece9a21 521 SMART SM00382 100 248 1.8E-7 T 25-04-2016 IPR003593 AAA+ ATPase domain SMA_RS07220 6624083b18e0aa010f5bb0de85b84bb0 352 Gene3D G3DSA:3.90.1150.10 243 349 1.9E-32 T 25-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SMA_RS07220 6624083b18e0aa010f5bb0de85b84bb0 352 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 9 348 2.0E-90 T 25-04-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9|UniPathway: UPA00031 SMA_RS07220 6624083b18e0aa010f5bb0de85b84bb0 352 SUPERFAMILY SSF53383 6 348 1.73E-69 T 25-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SMA_RS07220 6624083b18e0aa010f5bb0de85b84bb0 352 PANTHER PTHR11751:SF398 2 351 1.3E-81 T 25-04-2016 SMA_RS07220 6624083b18e0aa010f5bb0de85b84bb0 352 Gene3D G3DSA:3.40.640.10 38 242 3.9E-57 T 25-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SMA_RS07220 6624083b18e0aa010f5bb0de85b84bb0 352 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 2 350 51.168 T 25-04-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9|UniPathway: UPA00031 SMA_RS07220 6624083b18e0aa010f5bb0de85b84bb0 352 PANTHER PTHR11751 2 351 1.3E-81 T 25-04-2016 SMA_RS07220 6624083b18e0aa010f5bb0de85b84bb0 352 Pfam PF00155 Aminotransferase class I and II 23 346 9.0E-54 T 25-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 SMA_RS02470 bd18cd31eaa9bbe9c4491f1343a04e5b 535 Pfam PF12072 Domain of unknown function (DUF3552) 4 220 2.5E-42 T 25-04-2016 IPR022711 Ribonuclease Y, N-terminal SMA_RS02470 bd18cd31eaa9bbe9c4491f1343a04e5b 535 Pfam PF00013 KH domain 228 283 4.8E-7 T 25-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 SMA_RS02470 bd18cd31eaa9bbe9c4491f1343a04e5b 535 TIGRFAM TIGR03319 RNase_Y: ribonuclease Y 4 535 4.6E-230 T 25-04-2016 IPR017705 Ribonuclease Y GO:0003723|GO:0006402|GO:0016020 SMA_RS02470 bd18cd31eaa9bbe9c4491f1343a04e5b 535 PANTHER PTHR12826 204 534 4.0E-139 T 25-04-2016 SMA_RS02470 bd18cd31eaa9bbe9c4491f1343a04e5b 535 Hamap MF_00335 Ribonuclease Y [rny]. 2 535 24.851 T 25-04-2016 IPR017705 Ribonuclease Y GO:0003723|GO:0006402|GO:0016020 SMA_RS02470 bd18cd31eaa9bbe9c4491f1343a04e5b 535 TIGRFAM TIGR00277 HDIG: HDIG domain 347 424 2.5E-23 T 25-04-2016 IPR006675 HDIG domain SMA_RS02470 bd18cd31eaa9bbe9c4491f1343a04e5b 535 SUPERFAMILY SSF54791 223 319 4.79E-17 T 25-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 SMA_RS02470 bd18cd31eaa9bbe9c4491f1343a04e5b 535 Gene3D G3DSA:3.30.1370.10 236 313 4.4E-8 T 25-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 SMA_RS02470 bd18cd31eaa9bbe9c4491f1343a04e5b 535 SUPERFAMILY SSF109604 336 485 1.75E-29 T 25-04-2016 SMA_RS02470 bd18cd31eaa9bbe9c4491f1343a04e5b 535 SMART SM00322 223 290 1.0E-8 T 25-04-2016 IPR004087 K Homology domain GO:0003676 SMA_RS02470 bd18cd31eaa9bbe9c4491f1343a04e5b 535 SMART SM00471 347 453 1.6E-12 T 25-04-2016 IPR003607 HD/PDEase domain SMA_RS02470 bd18cd31eaa9bbe9c4491f1343a04e5b 535 Gene3D G3DSA:1.10.3210.10 331 511 1.8E-43 T 25-04-2016 IPR006674 HD domain SMA_RS02470 bd18cd31eaa9bbe9c4491f1343a04e5b 535 Pfam PF01966 HD domain 352 442 9.6E-19 T 25-04-2016 IPR006674 HD domain SMA_RS10220 c48bbf09d03db56145ac4efc418a33bc 290 PANTHER PTHR33545:SF7 8 286 7.3E-102 T 25-04-2016 SMA_RS10220 c48bbf09d03db56145ac4efc418a33bc 290 PIRSF PIRSF006483 1 285 2.1E-78 T 25-04-2016 IPR003740 Uncharacterised membrane protein YitT SMA_RS10220 c48bbf09d03db56145ac4efc418a33bc 290 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 12 217 1.5E-60 T 25-04-2016 IPR003740 Uncharacterised membrane protein YitT SMA_RS10220 c48bbf09d03db56145ac4efc418a33bc 290 Pfam PF10035 Uncharacterized protein conserved in bacteria (DUF2179) 223 275 1.5E-19 T 25-04-2016 IPR019264 Domain of unknown function DUF2179 SMA_RS10220 c48bbf09d03db56145ac4efc418a33bc 290 PANTHER PTHR33545 8 286 7.3E-102 T 25-04-2016 SMA_RS05210 3ce4899bab3039d4625543d75ec5060b 137 ProSitePatterns PS00934 Glyoxalase I signature 1. 8 29 - T 25-04-2016 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|UniPathway: UPA00619 SMA_RS05210 3ce4899bab3039d4625543d75ec5060b 137 Gene3D G3DSA:3.10.180.10 8 137 5.7E-35 T 25-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SMA_RS05210 3ce4899bab3039d4625543d75ec5060b 137 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 6 135 4.2E-17 T 25-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain SMA_RS05210 3ce4899bab3039d4625543d75ec5060b 137 SUPERFAMILY SSF54593 1 137 3.62E-27 T 25-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SMA_RS05985 9dd396e6bf487fdedf2e80af3ef4b974 306 Gene3D G3DSA:3.40.190.120 147 245 4.5E-29 T 25-04-2016 SMA_RS05985 9dd396e6bf487fdedf2e80af3ef4b974 306 Gene3D G3DSA:3.40.190.10 35 146 2.5E-53 T 25-04-2016 SMA_RS05985 9dd396e6bf487fdedf2e80af3ef4b974 306 Gene3D G3DSA:3.40.190.10 257 302 2.5E-53 T 25-04-2016 SMA_RS05985 9dd396e6bf487fdedf2e80af3ef4b974 306 PANTHER PTHR30177:SF9 36 300 5.8E-71 T 25-04-2016 SMA_RS05985 9dd396e6bf487fdedf2e80af3ef4b974 306 SUPERFAMILY SSF53850 40 301 2.06E-65 T 25-04-2016 SMA_RS05985 9dd396e6bf487fdedf2e80af3ef4b974 306 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 40 301 2.9E-64 T 25-04-2016 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 SMA_RS05985 9dd396e6bf487fdedf2e80af3ef4b974 306 PANTHER PTHR30177 36 300 5.8E-71 T 25-04-2016 SMA_RS00820 f1a06da21c8624bfa3db9b16bad13b64 347 Pfam PF04143 Sulphur transport 21 331 3.7E-90 T 25-04-2016 IPR007272 Sulphur transport domain SMA_RS00820 f1a06da21c8624bfa3db9b16bad13b64 347 PANTHER PTHR30574 3 340 7.4E-55 T 25-04-2016 SMA_RS00820 f1a06da21c8624bfa3db9b16bad13b64 347 PANTHER PTHR30574:SF1 3 340 7.4E-55 T 25-04-2016 SMA_RS04985 7485764139877b6d6be7a98bf306e798 194 Pfam PF01420 Type I restriction modification DNA specificity domain 15 179 2.5E-23 T 25-04-2016 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 SMA_RS04985 7485764139877b6d6be7a98bf306e798 194 PANTHER PTHR30408 3 190 6.7E-17 T 25-04-2016 SMA_RS04985 7485764139877b6d6be7a98bf306e798 194 SUPERFAMILY SSF116734 10 193 2.29E-42 T 25-04-2016 SMA_RS04985 7485764139877b6d6be7a98bf306e798 194 PANTHER PTHR30408:SF2 3 190 6.7E-17 T 25-04-2016 SMA_RS07340 ce743fda8c4ff8095f56c77a80754061 238 SUPERFAMILY SSF53474 53 210 6.05E-17 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMA_RS07340 ce743fda8c4ff8095f56c77a80754061 238 Gene3D G3DSA:3.40.50.1820 43 237 2.1E-16 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMA_RS07340 ce743fda8c4ff8095f56c77a80754061 238 Pfam PF12695 Alpha/beta hydrolase family 62 226 1.2E-54 T 25-04-2016 IPR029059 Alpha/beta hydrolase fold-5 SMA_RS04625 1f65800362f7bd64faf92d57be7ac557 181 Hamap MF_01572 UPF0397 protein . 2 181 27.458 T 25-04-2016 IPR022914 Protein of unknown function UPF0397 SMA_RS04625 1f65800362f7bd64faf92d57be7ac557 181 Pfam PF07155 ECF-type riboflavin transporter, S component 3 170 4.7E-56 T 25-04-2016 IPR009825 ECF transporter, substrate-specific component-like GO:0016020 SMA_RS04625 1f65800362f7bd64faf92d57be7ac557 181 PANTHER PTHR37815:SF2 1 181 2.9E-86 T 25-04-2016 SMA_RS04625 1f65800362f7bd64faf92d57be7ac557 181 PANTHER PTHR37815 1 181 2.9E-86 T 25-04-2016 SMA_RS03960 65246da19ea9ad0dad8d10c6f50b72d3 395 Pfam PF01594 Domain of unknown function DUF20 35 367 3.5E-73 T 25-04-2016 IPR002549 Transmembrane protein TqsA-like SMA_RS03960 65246da19ea9ad0dad8d10c6f50b72d3 395 PANTHER PTHR21716 45 373 2.6E-81 T 25-04-2016 IPR002549 Transmembrane protein TqsA-like SMA_RS03960 65246da19ea9ad0dad8d10c6f50b72d3 395 PANTHER PTHR21716 12 29 2.6E-81 T 25-04-2016 IPR002549 Transmembrane protein TqsA-like SMA_RS02045 97a1d5e1106c8ec55dd02a9151461939 322 PANTHER PTHR32332 1 322 1.6E-128 T 25-04-2016 SMA_RS02045 97a1d5e1106c8ec55dd02a9151461939 322 TIGRFAM TIGR03151 enACPred_II: putative enoyl-[acyl-carrier-protein] reductase II 2 310 7.8E-155 T 25-04-2016 IPR017569 Enoyl-(acyl-carrier-protein) reductase II, putative SMA_RS02045 97a1d5e1106c8ec55dd02a9151461939 322 PANTHER PTHR32332:SF20 1 322 1.6E-128 T 25-04-2016 SMA_RS02045 97a1d5e1106c8ec55dd02a9151461939 322 Gene3D G3DSA:3.20.20.70 2 298 8.0E-74 T 25-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SMA_RS02045 97a1d5e1106c8ec55dd02a9151461939 322 SUPERFAMILY SSF51412 2 309 5.04E-73 T 25-04-2016 SMA_RS02045 97a1d5e1106c8ec55dd02a9151461939 322 Pfam PF03060 Nitronate monooxygenase 3 302 9.2E-73 T 25-04-2016 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 SMA_RS00370 c046902ff02d10ee3a51c4d932dbb511 217 Gene3D G3DSA:3.30.1140.32 108 206 2.0E-43 T 25-04-2016 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 SMA_RS00370 c046902ff02d10ee3a51c4d932dbb511 217 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 205 37.972 T 25-04-2016 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 SMA_RS00370 c046902ff02d10ee3a51c4d932dbb511 217 Pfam PF00189 Ribosomal protein S3, C-terminal domain 119 201 2.3E-39 T 25-04-2016 SMA_RS00370 c046902ff02d10ee3a51c4d932dbb511 217 Pfam PF07650 KH domain 38 109 4.1E-21 T 25-04-2016 IPR004044 K Homology domain, type 2 GO:0003723 SMA_RS00370 c046902ff02d10ee3a51c4d932dbb511 217 SUPERFAMILY SSF54821 106 205 2.75E-37 T 25-04-2016 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 SMA_RS00370 c046902ff02d10ee3a51c4d932dbb511 217 Gene3D G3DSA:3.30.300.20 17 106 2.5E-33 T 25-04-2016 IPR015946 K homology domain-like, alpha/beta SMA_RS00370 c046902ff02d10ee3a51c4d932dbb511 217 ProSitePatterns PS00548 Ribosomal protein S3 signature. 162 196 - T 25-04-2016 IPR018280 Ribosomal protein S3, conserved site SMA_RS00370 c046902ff02d10ee3a51c4d932dbb511 217 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 207 1.8E-91 T 25-04-2016 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 SMA_RS00370 c046902ff02d10ee3a51c4d932dbb511 217 SUPERFAMILY SSF54814 2 105 9.42E-38 T 25-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 SMA_RS00370 c046902ff02d10ee3a51c4d932dbb511 217 PANTHER PTHR11760 2 214 1.6E-132 T 25-04-2016 SMA_RS00370 c046902ff02d10ee3a51c4d932dbb511 217 SMART SM00322 59 124 2.4E-8 T 25-04-2016 IPR004087 K Homology domain GO:0003676 SMA_RS00370 c046902ff02d10ee3a51c4d932dbb511 217 PANTHER PTHR11760:SF19 2 214 1.6E-132 T 25-04-2016 SMA_RS01600 e2199c03d25116906ea37a3f9f328ec7 344 PIRSF PIRSF005485 1 333 1.8E-73 T 25-04-2016 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 SMA_RS01600 e2199c03d25116906ea37a3f9f328ec7 344 SUPERFAMILY SSF46785 1 79 5.53E-21 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMA_RS01600 e2199c03d25116906ea37a3f9f328ec7 344 PANTHER PTHR30363:SF17 1 306 1.1E-68 T 25-04-2016 SMA_RS01600 e2199c03d25116906ea37a3f9f328ec7 344 TIGRFAM TIGR00331 hrcA: heat-inducible transcription repressor HrcA 3 328 8.8E-80 T 25-04-2016 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 SMA_RS01600 e2199c03d25116906ea37a3f9f328ec7 344 Pfam PF01628 HrcA protein C terminal domain 102 314 2.0E-28 T 25-04-2016 IPR021153 Heat-inducible transcription repressor HrcA, C-terminal GO:0003677|GO:0006355 SMA_RS01600 e2199c03d25116906ea37a3f9f328ec7 344 Hamap MF_00081 Heat-inducible transcription repressor HrcA [hrcA]. 1 322 25.994 T 25-04-2016 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 SMA_RS01600 e2199c03d25116906ea37a3f9f328ec7 344 Gene3D G3DSA:1.10.10.10 1 81 2.4E-30 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMA_RS01600 e2199c03d25116906ea37a3f9f328ec7 344 Pfam PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding 2 56 4.4E-7 T 25-04-2016 IPR005104 Winged helix-turn-helix transcription repressor, HrcA DNA-binding domain GO:0003677|GO:0006355 SMA_RS01600 e2199c03d25116906ea37a3f9f328ec7 344 PANTHER PTHR30363 1 306 1.1E-68 T 25-04-2016 SMA_RS01600 e2199c03d25116906ea37a3f9f328ec7 344 Gene3D G3DSA:3.30.450.40 175 333 3.5E-10 T 25-04-2016 IPR029016 GAF domain-like SMA_RS01600 e2199c03d25116906ea37a3f9f328ec7 344 SUPERFAMILY SSF55781 69 333 2.35E-29 T 25-04-2016 IPR029016 GAF domain-like SMA_RS09070 52e7dff8a900cf226854202913048ffa 293 Gene3D G3DSA:3.40.190.10 183 290 6.3E-36 T 25-04-2016 SMA_RS09070 52e7dff8a900cf226854202913048ffa 293 Gene3D G3DSA:3.40.190.10 33 128 1.1E-23 T 25-04-2016 SMA_RS09070 52e7dff8a900cf226854202913048ffa 293 SUPERFAMILY SSF53850 27 172 2.08E-33 T 25-04-2016 SMA_RS09070 52e7dff8a900cf226854202913048ffa 293 PANTHER PTHR30570:SF1 177 288 1.5E-28 T 25-04-2016 SMA_RS09070 52e7dff8a900cf226854202913048ffa 293 PANTHER PTHR30570 177 288 1.5E-28 T 25-04-2016 SMA_RS09070 52e7dff8a900cf226854202913048ffa 293 SUPERFAMILY SSF53850 178 290 4.6E-31 T 25-04-2016 SMA_RS09070 52e7dff8a900cf226854202913048ffa 293 Pfam PF12849 PBP superfamily domain 181 289 3.2E-22 T 25-04-2016 IPR024370 PBP domain SMA_RS09070 52e7dff8a900cf226854202913048ffa 293 Pfam PF12849 PBP superfamily domain 29 155 5.5E-12 T 25-04-2016 IPR024370 PBP domain SMA_RS09070 52e7dff8a900cf226854202913048ffa 293 Gene3D G3DSA:3.40.190.10 129 176 4.0E-6 T 25-04-2016 SMA_RS08855 be727894a5468869f17276ba5cd1b514 166 SUPERFAMILY SSF50249 1 166 8.0E-55 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMA_RS08855 be727894a5468869f17276ba5cd1b514 166 Pfam PF00436 Single-strand binding protein family 2 103 1.2E-36 T 25-04-2016 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 SMA_RS08855 be727894a5468869f17276ba5cd1b514 166 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 1 166 2.3E-47 T 25-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 SMA_RS08855 be727894a5468869f17276ba5cd1b514 166 Hamap MF_00984 Single-stranded DNA-binding protein. 2 107 35.914 T 25-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 SMA_RS08855 be727894a5468869f17276ba5cd1b514 166 PANTHER PTHR10302 1 166 7.0E-45 T 25-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 SMA_RS08855 be727894a5468869f17276ba5cd1b514 166 Gene3D G3DSA:2.40.50.140 1 166 6.6E-47 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMA_RS01870 62b48502778ee4dd92b982c91a2f475d 567 SUPERFAMILY SSF52467 192 360 1.6E-55 T 25-04-2016 IPR029035 DHS-like NAD/FAD-binding domain SMA_RS01870 62b48502778ee4dd92b982c91a2f475d 567 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 392 539 8.0E-46 T 25-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 SMA_RS01870 62b48502778ee4dd92b982c91a2f475d 567 PANTHER PTHR18968 3 564 1.6E-287 T 25-04-2016 SMA_RS01870 62b48502778ee4dd92b982c91a2f475d 567 Gene3D G3DSA:3.40.50.970 9 186 1.4E-69 T 25-04-2016 IPR029061 Thiamin diphosphate-binding fold SMA_RS01870 62b48502778ee4dd92b982c91a2f475d 567 PANTHER PTHR18968:SF116 3 564 1.6E-287 T 25-04-2016 SMA_RS01870 62b48502778ee4dd92b982c91a2f475d 567 SUPERFAMILY SSF52518 370 562 4.98E-63 T 25-04-2016 IPR029061 Thiamin diphosphate-binding fold SMA_RS01870 62b48502778ee4dd92b982c91a2f475d 567 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 11 175 3.5E-54 T 25-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 SMA_RS01870 62b48502778ee4dd92b982c91a2f475d 567 SUPERFAMILY SSF52518 6 190 2.43E-60 T 25-04-2016 IPR029061 Thiamin diphosphate-binding fold SMA_RS01870 62b48502778ee4dd92b982c91a2f475d 567 Gene3D G3DSA:3.40.50.970 355 554 2.4E-70 T 25-04-2016 IPR029061 Thiamin diphosphate-binding fold SMA_RS01870 62b48502778ee4dd92b982c91a2f475d 567 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 200 333 6.1E-43 T 25-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 SMA_RS01870 62b48502778ee4dd92b982c91a2f475d 567 Gene3D G3DSA:3.40.50.1220 194 354 1.9E-58 T 25-04-2016 IPR029035 DHS-like NAD/FAD-binding domain SMA_RS01870 62b48502778ee4dd92b982c91a2f475d 567 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 11 563 5.4E-229 T 25-04-2016 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 SMA_RS01870 62b48502778ee4dd92b982c91a2f475d 567 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 429 448 - T 25-04-2016 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 SMA_RS05250 b81a9dd69147c3554b9918e3b3b59e9b 318 PANTHER PTHR32196:SF40 9 318 1.9E-114 T 25-04-2016 SMA_RS05250 b81a9dd69147c3554b9918e3b3b59e9b 318 Pfam PF02653 Branched-chain amino acid transport system / permease component 12 297 1.7E-36 T 25-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 SMA_RS05250 b81a9dd69147c3554b9918e3b3b59e9b 318 PANTHER PTHR32196 9 318 1.9E-114 T 25-04-2016 SMA_RS09575 48227a7ed7e9ed428458a9c003c9961c 522 Gene3D G3DSA:3.90.1200.10 231 299 7.7E-9 T 25-04-2016 SMA_RS09575 48227a7ed7e9ed428458a9c003c9961c 522 PANTHER PTHR10566 2 519 2.1E-114 T 25-04-2016 SMA_RS09575 48227a7ed7e9ed428458a9c003c9961c 522 Pfam PF03109 ABC1 family 92 208 2.6E-28 T 25-04-2016 IPR004147 UbiB domain SMA_RS09575 48227a7ed7e9ed428458a9c003c9961c 522 SUPERFAMILY SSF56112 179 298 5.05E-30 T 25-04-2016 IPR011009 Protein kinase-like domain SMA_RS09575 48227a7ed7e9ed428458a9c003c9961c 522 SUPERFAMILY SSF56112 74 137 5.05E-30 T 25-04-2016 IPR011009 Protein kinase-like domain SMA_RS09575 48227a7ed7e9ed428458a9c003c9961c 522 Pfam PF01636 Phosphotransferase enzyme family 259 285 3.7E-5 T 25-04-2016 IPR002575 Aminoglycoside phosphotransferase SMA_RS09575 48227a7ed7e9ed428458a9c003c9961c 522 Gene3D G3DSA:3.90.1200.10 65 113 2.0E-4 T 25-04-2016 SMA_RS09575 48227a7ed7e9ed428458a9c003c9961c 522 PANTHER PTHR10566:SF10 2 519 2.1E-114 T 25-04-2016 SMA_RS02700 e8be7ef7aa05ffc0720439422f0b8170 317 Gene3D G3DSA:1.10.620.20 8 283 5.5E-37 T 25-04-2016 IPR012348 Ribonucleotide reductase-related GO:0016491|GO:0055114 Reactome: REACT_1698 SMA_RS02700 e8be7ef7aa05ffc0720439422f0b8170 317 Pfam PF00268 Ribonucleotide reductase, small chain 11 274 4.3E-31 T 25-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 SMA_RS02700 e8be7ef7aa05ffc0720439422f0b8170 317 SUPERFAMILY SSF47240 8 283 1.98E-46 T 25-04-2016 IPR009078 Ferritin-like superfamily SMA_RS08330 ddbf431828f8f43b125ec0c3721a43b1 269 PANTHER PTHR21198 1 264 1.2E-117 T 25-04-2016 SMA_RS08330 ddbf431828f8f43b125ec0c3721a43b1 269 SUPERFAMILY SSF53681 5 107 1.24E-35 T 25-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SMA_RS08330 ddbf431828f8f43b125ec0c3721a43b1 269 Pfam PF01177 Asp/Glu/Hydantoin racemase 6 212 8.6E-38 T 25-04-2016 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SMA_RS08330 ddbf431828f8f43b125ec0c3721a43b1 269 SUPERFAMILY SSF53681 109 261 1.83E-40 T 25-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SMA_RS08330 ddbf431828f8f43b125ec0c3721a43b1 269 Gene3D G3DSA:3.40.50.1860 2 172 6.5E-59 T 25-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SMA_RS08330 ddbf431828f8f43b125ec0c3721a43b1 269 Hamap MF_00258 Glutamate racemase [murI]. 4 256 40.275 T 25-04-2016 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SMA_RS08330 ddbf431828f8f43b125ec0c3721a43b1 269 PANTHER PTHR21198:SF2 1 264 1.2E-117 T 25-04-2016 SMA_RS08330 ddbf431828f8f43b125ec0c3721a43b1 269 TIGRFAM TIGR00067 glut_race: glutamate racemase 6 253 3.5E-80 T 25-04-2016 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SMA_RS08330 ddbf431828f8f43b125ec0c3721a43b1 269 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 179 189 - T 25-04-2016 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SMA_RS09100 c9075282e6bcb0546ab3ffa11ec7fa48 89 Pfam PF00253 Ribosomal protein S14p/S29e 36 88 7.4E-25 T 25-04-2016 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS09100 c9075282e6bcb0546ab3ffa11ec7fa48 89 SUPERFAMILY SSF57716 2 89 2.0E-26 T 25-04-2016 SMA_RS09100 c9075282e6bcb0546ab3ffa11ec7fa48 89 PANTHER PTHR19836 1 89 7.3E-54 T 25-04-2016 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS09100 c9075282e6bcb0546ab3ffa11ec7fa48 89 Gene3D G3DSA:4.10.830.10 35 89 3.5E-27 T 25-04-2016 SMA_RS09100 c9075282e6bcb0546ab3ffa11ec7fa48 89 PANTHER PTHR19836:SF20 1 89 7.3E-54 T 25-04-2016 SMA_RS09100 c9075282e6bcb0546ab3ffa11ec7fa48 89 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 89 23.088 T 25-04-2016 IPR023036 Ribosomal protein S14, bacterial/plastid SMA_RS08465 7496b4d5e597d09a931ecc39ba701dd2 494 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 376 484 4.9E-19 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMA_RS08465 7496b4d5e597d09a931ecc39ba701dd2 494 SMART SM00388 261 328 2.5E-17 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMA_RS08465 7496b4d5e597d09a931ecc39ba701dd2 494 SUPERFAMILY SSF47384 248 326 3.14E-16 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMA_RS08465 7496b4d5e597d09a931ecc39ba701dd2 494 Pfam PF00512 His Kinase A (phospho-acceptor) domain 262 326 3.0E-15 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMA_RS08465 7496b4d5e597d09a931ecc39ba701dd2 494 PANTHER PTHR24423 1 15 7.7E-60 T 25-04-2016 SMA_RS08465 7496b4d5e597d09a931ecc39ba701dd2 494 PANTHER PTHR24423 200 485 7.7E-60 T 25-04-2016 SMA_RS08465 7496b4d5e597d09a931ecc39ba701dd2 494 SUPERFAMILY SSF158472 207 257 9.29E-5 T 25-04-2016 SMA_RS08465 7496b4d5e597d09a931ecc39ba701dd2 494 SMART SM00387 373 487 5.4E-28 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMA_RS08465 7496b4d5e597d09a931ecc39ba701dd2 494 SUPERFAMILY SSF55874 317 488 3.93E-36 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMA_RS08465 7496b4d5e597d09a931ecc39ba701dd2 494 Gene3D G3DSA:3.30.565.10 314 490 9.7E-35 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMA_RS08465 7496b4d5e597d09a931ecc39ba701dd2 494 PRINTS PR00344 Bacterial sensor protein C-terminal signature 428 438 8.2E-14 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMA_RS08465 7496b4d5e597d09a931ecc39ba701dd2 494 PRINTS PR00344 Bacterial sensor protein C-terminal signature 447 465 8.2E-14 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMA_RS08465 7496b4d5e597d09a931ecc39ba701dd2 494 PRINTS PR00344 Bacterial sensor protein C-terminal signature 471 484 8.2E-14 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMA_RS08465 7496b4d5e597d09a931ecc39ba701dd2 494 PRINTS PR00344 Bacterial sensor protein C-terminal signature 410 424 8.2E-14 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMA_RS08465 7496b4d5e597d09a931ecc39ba701dd2 494 Gene3D G3DSA:1.10.287.130 253 313 8.8E-16 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMA_RS08465 7496b4d5e597d09a931ecc39ba701dd2 494 Pfam PF00672 HAMP domain 191 256 5.2E-7 T 25-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SMA_RS08465 7496b4d5e597d09a931ecc39ba701dd2 494 SMART SM00304 206 260 1.9E-6 T 25-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SMA_RS05595 449ab36aff20b1090d3fab43e6c3a109 159 PANTHER PTHR20941 1 159 1.2E-71 T 25-04-2016 SMA_RS05595 449ab36aff20b1090d3fab43e6c3a109 159 SUPERFAMILY SSF55083 1 154 1.7E-55 T 25-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 SMA_RS05595 449ab36aff20b1090d3fab43e6c3a109 159 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 5 133 1.1E-40 T 25-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 SMA_RS05595 449ab36aff20b1090d3fab43e6c3a109 159 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 4 133 1.2E-48 T 25-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 SMA_RS05595 449ab36aff20b1090d3fab43e6c3a109 159 Gene3D G3DSA:3.30.70.560 3 154 1.6E-58 T 25-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 SMA_RS05595 449ab36aff20b1090d3fab43e6c3a109 159 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 88 99 - T 25-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 SMA_RS05950 49f00a1c0ab0442f437eba31ebe390e6 194 SUPERFAMILY SSF116734 2 187 3.11E-18 T 25-04-2016 SMA_RS05950 49f00a1c0ab0442f437eba31ebe390e6 194 Pfam PF01420 Type I restriction modification DNA specificity domain 57 163 9.3E-7 T 25-04-2016 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 SMA_RS02500 9fe18ef340b07a80563c0604f97a7e6b 245 PANTHER PTHR13832 1 244 1.4E-58 T 25-04-2016 IPR015655 Protein phosphatase 2C family GO:0004722|GO:0006470 KEGG: 04660+3.1.3.16 SMA_RS02500 9fe18ef340b07a80563c0604f97a7e6b 245 SMART SM00332 1 238 2.9E-13 T 25-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 SMA_RS02500 9fe18ef340b07a80563c0604f97a7e6b 245 SMART SM00331 4 240 1.2E-30 T 25-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 SMA_RS02500 9fe18ef340b07a80563c0604f97a7e6b 245 PANTHER PTHR13832:SF278 1 244 1.4E-58 T 25-04-2016 SMA_RS02500 9fe18ef340b07a80563c0604f97a7e6b 245 Gene3D G3DSA:3.60.40.10 2 239 6.5E-62 T 25-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 SMA_RS02500 9fe18ef340b07a80563c0604f97a7e6b 245 Pfam PF13672 Protein phosphatase 2C 12 202 6.9E-14 T 25-04-2016 SMA_RS02500 9fe18ef340b07a80563c0604f97a7e6b 245 SUPERFAMILY SSF81606 2 239 1.1E-58 T 25-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 SMA_RS07215 c5000c6fe73e05e6a1934b4e69cf9201 322 Gene3D G3DSA:3.30.930.10 20 311 3.1E-64 T 25-04-2016 SMA_RS07215 c5000c6fe73e05e6a1934b4e69cf9201 322 PIRSF PIRSF001549 1 320 4.5E-57 T 25-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 SMA_RS07215 c5000c6fe73e05e6a1934b4e69cf9201 322 PANTHER PTHR11476 1 317 1.5E-63 T 25-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 SMA_RS07215 c5000c6fe73e05e6a1934b4e69cf9201 322 PANTHER PTHR11476:SF5 1 317 1.5E-63 T 25-04-2016 SMA_RS07215 c5000c6fe73e05e6a1934b4e69cf9201 322 Hamap MF_00125 ATP phosphoribosyltransferase regulatory subunit [hisZ]. 16 322 27.408 T 25-04-2016 IPR004517 ATP phosphoribosyltransferase regulatory subunit GO:0000105|GO:0005737 UniPathway: UPA00031 SMA_RS07215 c5000c6fe73e05e6a1934b4e69cf9201 322 SUPERFAMILY SSF55681 6 315 5.97E-56 T 25-04-2016 SMA_RS07215 c5000c6fe73e05e6a1934b4e69cf9201 322 Pfam PF13393 Histidyl-tRNA synthetase 9 310 6.3E-62 T 25-04-2016 SMA_RS07170 7dbbbfd334e5bd8e67042fc5d9a1dc22 104 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 2 85 1.5E-32 T 25-04-2016 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31|UniPathway: UPA00031 SMA_RS07170 7dbbbfd334e5bd8e67042fc5d9a1dc22 104 SUPERFAMILY SSF101386 2 89 2.24E-26 T 25-04-2016 SMA_RS07170 7dbbbfd334e5bd8e67042fc5d9a1dc22 104 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 6 86 3.5E-17 T 25-04-2016 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31|UniPathway: UPA00031 SMA_RS07170 7dbbbfd334e5bd8e67042fc5d9a1dc22 104 PANTHER PTHR21256 1 91 1.0E-37 T 25-04-2016 SMA_RS07170 7dbbbfd334e5bd8e67042fc5d9a1dc22 104 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 1 85 18.383 T 25-04-2016 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31|UniPathway: UPA00031 SMA_RS07170 7dbbbfd334e5bd8e67042fc5d9a1dc22 104 Gene3D G3DSA:1.10.287.1080 28 80 1.1E-6 T 25-04-2016 SMA_RS01180 e5c58eddb7e8ddfd6cc25145c3cc01cf 377 Gene3D G3DSA:2.40.50.100 251 297 3.0E-25 T 25-04-2016 SMA_RS01180 e5c58eddb7e8ddfd6cc25145c3cc01cf 377 Gene3D G3DSA:2.40.50.100 362 377 3.0E-25 T 25-04-2016 SMA_RS01180 e5c58eddb7e8ddfd6cc25145c3cc01cf 377 PANTHER PTHR24220:SF151 5 301 1.4E-166 T 25-04-2016 SMA_RS01180 e5c58eddb7e8ddfd6cc25145c3cc01cf 377 Pfam PF03459 TOBE domain 311 366 3.1E-9 T 25-04-2016 IPR005116 Transport-associated OB, type 1 SMA_RS01180 e5c58eddb7e8ddfd6cc25145c3cc01cf 377 Gene3D G3DSA:2.40.50.140 298 360 2.5E-15 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMA_RS01180 e5c58eddb7e8ddfd6cc25145c3cc01cf 377 Pfam PF00005 ABC transporter 22 163 2.1E-29 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMA_RS01180 e5c58eddb7e8ddfd6cc25145c3cc01cf 377 SMART SM00382 30 239 1.3E-12 T 25-04-2016 IPR003593 AAA+ ATPase domain SMA_RS01180 e5c58eddb7e8ddfd6cc25145c3cc01cf 377 SUPERFAMILY SSF52540 4 255 1.44E-81 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS01180 e5c58eddb7e8ddfd6cc25145c3cc01cf 377 PANTHER PTHR24220 5 301 1.4E-166 T 25-04-2016 SMA_RS01180 e5c58eddb7e8ddfd6cc25145c3cc01cf 377 Gene3D G3DSA:3.40.50.300 4 246 1.0E-73 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS01180 e5c58eddb7e8ddfd6cc25145c3cc01cf 377 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SMA_RS01180 e5c58eddb7e8ddfd6cc25145c3cc01cf 377 SUPERFAMILY SSF50331 248 376 4.37E-29 T 25-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal SMA_RS03555 dbd4d134011bb6d3141fe47b1cac2571 96 SUPERFAMILY SSF46689 1 90 1.43E-8 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMA_RS05730 e1c8357a6e0922a62587298f058011db 141 PANTHER PTHR30345 1 141 7.6E-87 T 25-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 SMA_RS05730 e1c8357a6e0922a62587298f058011db 141 SUPERFAMILY SSF89623 1 140 1.7E-45 T 25-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 SMA_RS05730 e1c8357a6e0922a62587298f058011db 141 TIGRFAM TIGR00689 rpiB_lacA_lacB: sugar-phosphate isomerase, RpiB/LacA/LacB family 3 139 1.6E-34 T 25-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 SMA_RS05730 e1c8357a6e0922a62587298f058011db 141 PANTHER PTHR30345:SF5 1 141 7.6E-87 T 25-04-2016 SMA_RS05730 e1c8357a6e0922a62587298f058011db 141 Gene3D G3DSA:3.40.1400.10 1 140 9.4E-44 T 25-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 SMA_RS05730 e1c8357a6e0922a62587298f058011db 141 Hamap MF_01555 Galactose-6-phosphate isomerase subunit LacA [lacA]. 1 141 40.422 T 25-04-2016 IPR004783 Galactose-6-phosphate isomerase subunit LacA GO:0005990|GO:0050044 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 SMA_RS05730 e1c8357a6e0922a62587298f058011db 141 Pfam PF02502 Ribose/Galactose Isomerase 3 137 6.7E-39 T 25-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 SMA_RS05730 e1c8357a6e0922a62587298f058011db 141 TIGRFAM TIGR01118 lacA: galactose-6-phosphate isomerase, LacA subunit 1 140 9.3E-74 T 25-04-2016 IPR004783 Galactose-6-phosphate isomerase subunit LacA GO:0005990|GO:0050044 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 SMA_RS05730 e1c8357a6e0922a62587298f058011db 141 PIRSF PIRSF005384 1 141 3.7E-41 T 25-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 SMA_RS06560 0abe4f52012665f43979d4f035f975bc 341 SUPERFAMILY SSF53822 59 325 4.71E-45 T 25-04-2016 IPR028082 Periplasmic binding protein-like I SMA_RS06560 0abe4f52012665f43979d4f035f975bc 341 PANTHER PTHR30146 1 341 1.5E-86 T 25-04-2016 SMA_RS06560 0abe4f52012665f43979d4f035f975bc 341 Pfam PF13377 Periplasmic binding protein-like domain 175 334 3.6E-28 T 25-04-2016 SMA_RS06560 0abe4f52012665f43979d4f035f975bc 341 SUPERFAMILY SSF47413 1 59 2.06E-17 T 25-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SMA_RS06560 0abe4f52012665f43979d4f035f975bc 341 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 8.3E-20 T 25-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SMA_RS06560 0abe4f52012665f43979d4f035f975bc 341 PANTHER PTHR30146:SF30 1 341 1.5E-86 T 25-04-2016 SMA_RS06560 0abe4f52012665f43979d4f035f975bc 341 SMART SM00354 1 71 2.4E-29 T 25-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SMA_RS06560 0abe4f52012665f43979d4f035f975bc 341 Gene3D G3DSA:1.10.260.40 1 50 3.9E-24 T 25-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SMA_RS06560 0abe4f52012665f43979d4f035f975bc 341 Gene3D G3DSA:3.40.50.2300 180 314 4.8E-29 T 25-04-2016 SMA_RS06560 0abe4f52012665f43979d4f035f975bc 341 Gene3D G3DSA:3.40.50.2300 51 179 1.6E-29 T 25-04-2016 SMA_RS01295 d97599a33bdfb5b4bdf5affcc44e3c70 481 SMART SM00642 6 423 7.5E-5 T 25-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 SMA_RS01295 d97599a33bdfb5b4bdf5affcc44e3c70 481 Pfam PF00128 Alpha amylase, catalytic domain 35 234 5.9E-12 T 25-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 SMA_RS01295 d97599a33bdfb5b4bdf5affcc44e3c70 481 SUPERFAMILY SSF51445 4 425 4.53E-78 T 25-04-2016 IPR017853 Glycoside hydrolase superfamily SMA_RS01295 d97599a33bdfb5b4bdf5affcc44e3c70 481 TIGRFAM TIGR03852 sucrose_gtfA: sucrose phosphorylase 5 474 8.6E-265 T 25-04-2016 IPR022527 Sucrose phosphorylase, GftA GO:0005985|GO:0009018 SMA_RS01295 d97599a33bdfb5b4bdf5affcc44e3c70 481 PANTHER PTHR10357 8 294 1.8E-143 T 25-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 SMA_RS01295 d97599a33bdfb5b4bdf5affcc44e3c70 481 PANTHER PTHR10357 342 473 1.8E-143 T 25-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 SMA_RS01295 d97599a33bdfb5b4bdf5affcc44e3c70 481 PANTHER PTHR10357:SF132 8 294 1.8E-143 T 25-04-2016 SMA_RS01295 d97599a33bdfb5b4bdf5affcc44e3c70 481 PANTHER PTHR10357:SF132 342 473 1.8E-143 T 25-04-2016 SMA_RS01295 d97599a33bdfb5b4bdf5affcc44e3c70 481 Gene3D G3DSA:3.90.400.10 88 167 1.6E-32 T 25-04-2016 SMA_RS01295 d97599a33bdfb5b4bdf5affcc44e3c70 481 PIRSF PIRSF003059 1 480 2.0E-192 T 25-04-2016 IPR016377 Sucrose phosphorylase GO:0005985|GO:0009018 KEGG: 00500+2.4.1.7|MetaCyc: PWY-5384 SMA_RS01295 d97599a33bdfb5b4bdf5affcc44e3c70 481 Gene3D G3DSA:3.20.20.80 4 87 6.0E-99 T 25-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 SMA_RS01295 d97599a33bdfb5b4bdf5affcc44e3c70 481 Gene3D G3DSA:3.20.20.80 173 425 6.0E-99 T 25-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 SMA_RS01645 fe3e746337bdf4df80ac8d4c78282be7 427 TIGRFAM TIGR00115 tig: trigger factor 13 420 2.5E-129 T 25-04-2016 IPR005215 Trigger factor GO:0015031 SMA_RS01645 fe3e746337bdf4df80ac8d4c78282be7 427 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 264 421 5.0E-48 T 25-04-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 SMA_RS01645 fe3e746337bdf4df80ac8d4c78282be7 427 Gene3D G3DSA:3.30.70.1050 1 119 2.2E-34 T 25-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 SMA_RS01645 fe3e746337bdf4df80ac8d4c78282be7 427 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 159 231 1.2E-14 T 25-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 SMA_RS01645 fe3e746337bdf4df80ac8d4c78282be7 427 PANTHER PTHR30560:SF3 1 427 1.8E-119 T 25-04-2016 SMA_RS01645 fe3e746337bdf4df80ac8d4c78282be7 427 Pfam PF05697 Bacterial trigger factor protein (TF) 1 145 8.1E-40 T 25-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 SMA_RS01645 fe3e746337bdf4df80ac8d4c78282be7 427 SUPERFAMILY SSF54534 89 243 2.16E-36 T 25-04-2016 SMA_RS01645 fe3e746337bdf4df80ac8d4c78282be7 427 Gene3D G3DSA:3.10.50.40 158 217 3.1E-11 T 25-04-2016 SMA_RS01645 fe3e746337bdf4df80ac8d4c78282be7 427 Hamap MF_00303 Trigger factor [tig]. 1 427 22.418 T 25-04-2016 IPR005215 Trigger factor GO:0015031 SMA_RS01645 fe3e746337bdf4df80ac8d4c78282be7 427 PIRSF PIRSF003095 1 427 1.9E-123 T 25-04-2016 IPR005215 Trigger factor GO:0015031 SMA_RS01645 fe3e746337bdf4df80ac8d4c78282be7 427 Gene3D G3DSA:1.10.3120.10 218 400 1.5E-59 T 25-04-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 SMA_RS01645 fe3e746337bdf4df80ac8d4c78282be7 427 SUPERFAMILY SSF102735 1 128 1.83E-33 T 25-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 SMA_RS01645 fe3e746337bdf4df80ac8d4c78282be7 427 SUPERFAMILY SSF109998 250 427 2.35E-40 T 25-04-2016 IPR027304 Trigger factor/SurA domain SMA_RS01645 fe3e746337bdf4df80ac8d4c78282be7 427 PANTHER PTHR30560 1 427 1.8E-119 T 25-04-2016 SMA_RS06510 cb18eeee5819bbec7d0f51f97ca349b4 125 TIGRFAM TIGR00220 mscL: large conductance mechanosensitive channel protein 1 125 1.8E-31 T 25-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 SMA_RS06510 cb18eeee5819bbec7d0f51f97ca349b4 125 SUPERFAMILY SSF81330 11 119 2.62E-26 T 25-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 SMA_RS06510 cb18eeee5819bbec7d0f51f97ca349b4 125 Pfam PF01741 Large-conductance mechanosensitive channel, MscL 1 123 1.6E-35 T 25-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 SMA_RS06510 cb18eeee5819bbec7d0f51f97ca349b4 125 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 4 18 1.8E-5 T 25-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 SMA_RS06510 cb18eeee5819bbec7d0f51f97ca349b4 125 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 84 93 1.8E-5 T 25-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 SMA_RS06510 cb18eeee5819bbec7d0f51f97ca349b4 125 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 75 83 1.8E-5 T 25-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 SMA_RS06510 cb18eeee5819bbec7d0f51f97ca349b4 125 PANTHER PTHR30266:SF2 1 125 4.4E-37 T 25-04-2016 SMA_RS06510 cb18eeee5819bbec7d0f51f97ca349b4 125 PANTHER PTHR30266 1 125 4.4E-37 T 25-04-2016 SMA_RS01435 29af7cabee1a264de8c27f1c2fa0a78d 134 Hamap MF_01468 Mini-ribonuclease 3 [mrnC]. 4 130 29.347 T 25-04-2016 IPR008226 Mini-ribonuclease 3 family SMA_RS01435 29af7cabee1a264de8c27f1c2fa0a78d 134 PIRSF PIRSF005520 1 134 1.9E-52 T 25-04-2016 IPR008226 Mini-ribonuclease 3 family SMA_RS01435 29af7cabee1a264de8c27f1c2fa0a78d 134 SMART SM00535 6 133 0.0054 T 25-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 SMA_RS01435 29af7cabee1a264de8c27f1c2fa0a78d 134 SUPERFAMILY SSF69065 6 130 7.32E-45 T 25-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 SMA_RS01435 29af7cabee1a264de8c27f1c2fa0a78d 134 Pfam PF00636 Ribonuclease III domain 15 113 4.5E-14 T 25-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 SMA_RS01435 29af7cabee1a264de8c27f1c2fa0a78d 134 PANTHER PTHR34276 6 131 1.2E-55 T 25-04-2016 SMA_RS01435 29af7cabee1a264de8c27f1c2fa0a78d 134 Gene3D G3DSA:1.10.1520.10 3 131 9.1E-53 T 25-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 SMA_RS00995 1b1fd71aee67e2db92928a4e87f7206e 394 PANTHER PTHR11751 14 390 1.3E-126 T 25-04-2016 SMA_RS00995 1b1fd71aee67e2db92928a4e87f7206e 394 SUPERFAMILY SSF53383 1 392 1.88E-97 T 25-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SMA_RS00995 1b1fd71aee67e2db92928a4e87f7206e 394 Pfam PF00155 Aminotransferase class I and II 31 385 5.6E-61 T 25-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 SMA_RS00995 1b1fd71aee67e2db92928a4e87f7206e 394 PANTHER PTHR11751:SF306 14 390 1.3E-126 T 25-04-2016 SMA_RS00995 1b1fd71aee67e2db92928a4e87f7206e 394 Gene3D G3DSA:3.40.640.10 51 271 1.1E-71 T 25-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SMA_RS00995 1b1fd71aee67e2db92928a4e87f7206e 394 Gene3D G3DSA:3.90.1150.10 272 391 3.2E-26 T 25-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SMA_RS00995 1b1fd71aee67e2db92928a4e87f7206e 394 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 234 247 - T 25-04-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Reactome: REACT_13 SMA_RS09385 c5ef24b8dd71bd15e4ce481b9fc85b70 197 ProSitePatterns PS00761 Signal peptidases I signature 3. 153 166 - T 25-04-2016 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 SMA_RS09385 c5ef24b8dd71bd15e4ce481b9fc85b70 197 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 41 190 5.7E-38 T 25-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 SMA_RS09385 c5ef24b8dd71bd15e4ce481b9fc85b70 197 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 148 167 8.7E-12 T 25-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 SMA_RS09385 c5ef24b8dd71bd15e4ce481b9fc85b70 197 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 100 112 8.7E-12 T 25-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 SMA_RS09385 c5ef24b8dd71bd15e4ce481b9fc85b70 197 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 55 71 8.7E-12 T 25-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 SMA_RS09385 c5ef24b8dd71bd15e4ce481b9fc85b70 197 SUPERFAMILY SSF51306 57 196 1.11E-39 T 25-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C SMA_RS09385 c5ef24b8dd71bd15e4ce481b9fc85b70 197 Pfam PF00717 Peptidase S24-like 61 125 2.8E-13 T 25-04-2016 IPR019759 Peptidase S24/S26A/S26B SMA_RS09385 c5ef24b8dd71bd15e4ce481b9fc85b70 197 Gene3D G3DSA:2.10.109.10 148 196 2.4E-24 T 25-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain SMA_RS09385 c5ef24b8dd71bd15e4ce481b9fc85b70 197 Gene3D G3DSA:2.10.109.10 55 110 2.4E-24 T 25-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain SMA_RS09385 c5ef24b8dd71bd15e4ce481b9fc85b70 197 PANTHER PTHR12383 34 197 1.0E-30 T 25-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 SMA_RS09050 3e08d058574e8177c8bd3adc60034d8a 217 Pfam PF01895 PhoU domain 119 204 9.1E-20 T 25-04-2016 IPR026022 PhoU domain SMA_RS09050 3e08d058574e8177c8bd3adc60034d8a 217 Pfam PF01895 PhoU domain 18 104 8.9E-15 T 25-04-2016 IPR026022 PhoU domain SMA_RS09050 3e08d058574e8177c8bd3adc60034d8a 217 PIRSF PIRSF003107 1 217 1.2E-58 T 25-04-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 SMA_RS09050 3e08d058574e8177c8bd3adc60034d8a 217 PANTHER PTHR10010 1 211 6.0E-47 T 25-04-2016 SMA_RS09050 3e08d058574e8177c8bd3adc60034d8a 217 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 5 211 3.9E-60 T 25-04-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 SMA_RS09050 3e08d058574e8177c8bd3adc60034d8a 217 PANTHER PTHR10010:SF14 1 211 6.0E-47 T 25-04-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 SMA_RS09050 3e08d058574e8177c8bd3adc60034d8a 217 Gene3D G3DSA:1.20.58.220 3 105 3.9E-25 T 25-04-2016 SMA_RS09050 3e08d058574e8177c8bd3adc60034d8a 217 Gene3D G3DSA:1.20.58.220 118 211 4.5E-26 T 25-04-2016 SMA_RS09050 3e08d058574e8177c8bd3adc60034d8a 217 SUPERFAMILY SSF109755 3 212 1.47E-50 T 25-04-2016 SMA_RS10470 f186adfdf3e793583fb3a12a4a3005bc 125 SUPERFAMILY SSF55174 2 66 1.44E-14 T 25-04-2016 SMA_RS10470 f186adfdf3e793583fb3a12a4a3005bc 125 TIGRFAM TIGR02988 YaaA_near_RecF: S4 domain protein YaaA 2 61 1.4E-25 T 25-04-2016 IPR014330 RNA-binding S4-related,YaaA SMA_RS10470 f186adfdf3e793583fb3a12a4a3005bc 125 PANTHER PTHR32319 4 90 2.1E-27 T 25-04-2016 SMA_RS10470 f186adfdf3e793583fb3a12a4a3005bc 125 PANTHER PTHR32319:SF3 4 90 2.1E-27 T 25-04-2016 SMA_RS10470 f186adfdf3e793583fb3a12a4a3005bc 125 Gene3D G3DSA:3.10.290.10 1 66 3.1E-18 T 25-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SMA_RS10470 f186adfdf3e793583fb3a12a4a3005bc 125 Pfam PF13275 S4 domain 4 66 8.6E-22 T 25-04-2016 SMA_RS10030 c0b73e569762cb566017a517d6d5ab06 288 Pfam PF01430 Hsp33 protein 2 278 5.4E-81 T 25-04-2016 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 SMA_RS10030 c0b73e569762cb566017a517d6d5ab06 288 Gene3D G3DSA:3.55.30.10 1 231 7.4E-74 T 25-04-2016 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 SMA_RS10030 c0b73e569762cb566017a517d6d5ab06 288 Hamap MF_00117 33 kDa chaperonin [hslO]. 1 288 35.25 T 25-04-2016 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 SMA_RS10030 c0b73e569762cb566017a517d6d5ab06 288 SUPERFAMILY SSF64397 1 239 1.31E-63 T 25-04-2016 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 SMA_RS10030 c0b73e569762cb566017a517d6d5ab06 288 PIRSF PIRSF005261 1 288 5.5E-73 T 25-04-2016 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 SMA_RS10030 c0b73e569762cb566017a517d6d5ab06 288 Gene3D G3DSA:3.90.1280.10 232 287 2.5E-25 T 25-04-2016 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 SMA_RS10030 c0b73e569762cb566017a517d6d5ab06 288 SUPERFAMILY SSF118352 231 287 3.14E-20 T 25-04-2016 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 SMA_RS10030 c0b73e569762cb566017a517d6d5ab06 288 PANTHER PTHR30111 1 288 1.0E-82 T 25-04-2016 SMA_RS10030 c0b73e569762cb566017a517d6d5ab06 288 PANTHER PTHR30111:SF1 1 288 1.0E-82 T 25-04-2016 SMA_RS02020 57ef2a65bbed4e2e58db93669c9acfe7 215 Gene3D G3DSA:3.40.50.1000 91 213 1.4E-35 T 25-04-2016 IPR023214 HAD-like domain SMA_RS02020 57ef2a65bbed4e2e58db93669c9acfe7 215 Gene3D G3DSA:3.40.50.1000 2 18 1.4E-35 T 25-04-2016 IPR023214 HAD-like domain SMA_RS02020 57ef2a65bbed4e2e58db93669c9acfe7 215 Gene3D G3DSA:1.10.150.240 19 83 3.1E-31 T 25-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 SMA_RS02020 57ef2a65bbed4e2e58db93669c9acfe7 215 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 125 184 5.1E-10 T 25-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SMA_RS02020 57ef2a65bbed4e2e58db93669c9acfe7 215 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 90 179 2.7E-7 T 25-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SMA_RS02020 57ef2a65bbed4e2e58db93669c9acfe7 215 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 186 9.1E-31 T 25-04-2016 IPR023214 HAD-like domain SMA_RS02020 57ef2a65bbed4e2e58db93669c9acfe7 215 PANTHER PTHR18901 1 215 1.3E-34 T 25-04-2016 SMA_RS02020 57ef2a65bbed4e2e58db93669c9acfe7 215 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 4 15 1.0E-5 T 25-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SMA_RS02020 57ef2a65bbed4e2e58db93669c9acfe7 215 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 149 169 1.0E-5 T 25-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SMA_RS02020 57ef2a65bbed4e2e58db93669c9acfe7 215 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 131 147 1.0E-5 T 25-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SMA_RS02020 57ef2a65bbed4e2e58db93669c9acfe7 215 SUPERFAMILY SSF56784 4 213 8.82E-41 T 25-04-2016 IPR023214 HAD-like domain SMA_RS09405 e9dacee6a664b11341ac6745dd166073 156 PRINTS PR00690 Adhesin family signature 74 91 2.8E-23 T 25-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 SMA_RS09405 e9dacee6a664b11341ac6745dd166073 156 PRINTS PR00690 Adhesin family signature 61 74 2.8E-23 T 25-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 SMA_RS09405 e9dacee6a664b11341ac6745dd166073 156 PRINTS PR00690 Adhesin family signature 30 48 2.8E-23 T 25-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 SMA_RS09405 e9dacee6a664b11341ac6745dd166073 156 PANTHER PTHR30477:SF12 4 148 2.2E-57 T 25-04-2016 SMA_RS09405 e9dacee6a664b11341ac6745dd166073 156 Pfam PF01297 Zinc-uptake complex component A periplasmic 33 147 7.6E-25 T 25-04-2016 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 SMA_RS09405 e9dacee6a664b11341ac6745dd166073 156 Gene3D G3DSA:3.40.50.1980 12 148 3.3E-33 T 25-04-2016 SMA_RS09405 e9dacee6a664b11341ac6745dd166073 156 SUPERFAMILY SSF53807 29 148 8.83E-32 T 25-04-2016 SMA_RS09405 e9dacee6a664b11341ac6745dd166073 156 PRINTS PR00691 Adhesin B signature 30 51 6.0E-39 T 25-04-2016 IPR006129 Adhesin B GO:0007155 SMA_RS09405 e9dacee6a664b11341ac6745dd166073 156 PRINTS PR00691 Adhesin B signature 55 73 6.0E-39 T 25-04-2016 IPR006129 Adhesin B GO:0007155 SMA_RS09405 e9dacee6a664b11341ac6745dd166073 156 PRINTS PR00691 Adhesin B signature 74 93 6.0E-39 T 25-04-2016 IPR006129 Adhesin B GO:0007155 SMA_RS09405 e9dacee6a664b11341ac6745dd166073 156 PRINTS PR00691 Adhesin B signature 134 153 6.0E-39 T 25-04-2016 IPR006129 Adhesin B GO:0007155 SMA_RS09405 e9dacee6a664b11341ac6745dd166073 156 PANTHER PTHR30477 4 148 2.2E-57 T 25-04-2016 SMA_RS07900 05e7e9688a54b15e4747c92c479a15fa 230 SUPERFAMILY SSF53167 1 229 2.75E-71 T 25-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 SMA_RS07900 05e7e9688a54b15e4747c92c479a15fa 230 TIGRFAM TIGR01704 MTA/SAH-Nsdase: MTA/SAH nucleosidase 2 228 8.2E-66 T 25-04-2016 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154|UniPathway: UPA00904 SMA_RS07900 05e7e9688a54b15e4747c92c479a15fa 230 Gene3D G3DSA:3.40.50.1580 1 229 2.2E-74 T 25-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 SMA_RS07900 05e7e9688a54b15e4747c92c479a15fa 230 PANTHER PTHR21234 1 229 8.0E-51 T 25-04-2016 IPR018017 Nucleoside phosphorylase SMA_RS07900 05e7e9688a54b15e4747c92c479a15fa 230 PANTHER PTHR21234:SF16 1 229 8.0E-51 T 25-04-2016 SMA_RS07900 05e7e9688a54b15e4747c92c479a15fa 230 Pfam PF01048 Phosphorylase superfamily 2 226 9.3E-49 T 25-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 SMA_RS06120 180ce7d1f6e810542f3171a46c14eff2 303 PIRSF PIRSF000535 1 303 3.1E-85 T 25-04-2016 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 SMA_RS06120 180ce7d1f6e810542f3171a46c14eff2 303 Pfam PF00294 pfkB family carbohydrate kinase 11 280 3.0E-51 T 25-04-2016 IPR011611 Carbohydrate kinase PfkB SMA_RS06120 180ce7d1f6e810542f3171a46c14eff2 303 Gene3D G3DSA:3.40.1190.20 33 303 1.0E-82 T 25-04-2016 IPR029056 Ribokinase-like SMA_RS06120 180ce7d1f6e810542f3171a46c14eff2 303 TIGRFAM TIGR03168 1-PFK: hexose kinase, 1-phosphofructokinase family 2 301 1.6E-109 T 25-04-2016 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 SMA_RS06120 180ce7d1f6e810542f3171a46c14eff2 303 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 243 256 - T 25-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 SMA_RS06120 180ce7d1f6e810542f3171a46c14eff2 303 PANTHER PTHR10584:SF170 1 303 7.7E-109 T 25-04-2016 SMA_RS06120 180ce7d1f6e810542f3171a46c14eff2 303 TIGRFAM TIGR03828 pfkB: 1-phosphofructokinase 2 301 2.1E-110 T 25-04-2016 IPR022463 Fructose 1-phosphate kinase GO:0008662 KEGG: 00051+2.7.1.56 SMA_RS06120 180ce7d1f6e810542f3171a46c14eff2 303 PANTHER PTHR10584 1 303 7.7E-109 T 25-04-2016 SMA_RS06120 180ce7d1f6e810542f3171a46c14eff2 303 SUPERFAMILY SSF53613 1 282 1.54E-68 T 25-04-2016 IPR029056 Ribokinase-like SMA_RS02360 a0a256c0fac361223a2c048267a6137b 754 Pfam PF00905 Penicillin binding protein transpeptidase domain 291 615 2.8E-67 T 25-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 SMA_RS02360 a0a256c0fac361223a2c048267a6137b 754 SUPERFAMILY SSF56601 265 622 2.15E-72 T 25-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SMA_RS02360 a0a256c0fac361223a2c048267a6137b 754 Gene3D G3DSA:3.40.710.10 272 619 3.9E-71 T 25-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SMA_RS02360 a0a256c0fac361223a2c048267a6137b 754 SUPERFAMILY SSF54184 636 694 4.58E-12 T 25-04-2016 SMA_RS02360 a0a256c0fac361223a2c048267a6137b 754 SUPERFAMILY SSF54184 698 753 1.44E-11 T 25-04-2016 SMA_RS02360 a0a256c0fac361223a2c048267a6137b 754 PANTHER PTHR30627:SF1 10 656 8.2E-150 T 25-04-2016 SMA_RS02360 a0a256c0fac361223a2c048267a6137b 754 PANTHER PTHR30627 10 656 8.2E-150 T 25-04-2016 SMA_RS02360 a0a256c0fac361223a2c048267a6137b 754 Pfam PF03717 Penicillin-binding Protein dimerisation domain 73 246 6.7E-25 T 25-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 SMA_RS02360 a0a256c0fac361223a2c048267a6137b 754 SUPERFAMILY SSF56519 69 264 1.57E-47 T 25-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 SMA_RS02360 a0a256c0fac361223a2c048267a6137b 754 Pfam PF03793 PASTA domain 698 753 5.4E-8 T 25-04-2016 IPR005543 PASTA domain SMA_RS02360 a0a256c0fac361223a2c048267a6137b 754 SMART SM00740 635 695 1.6 T 25-04-2016 IPR005543 PASTA domain SMA_RS02360 a0a256c0fac361223a2c048267a6137b 754 SMART SM00740 697 754 4.6E-8 T 25-04-2016 IPR005543 PASTA domain SMA_RS02360 a0a256c0fac361223a2c048267a6137b 754 Gene3D G3DSA:3.90.1310.10 167 271 5.1E-31 T 25-04-2016 SMA_RS00665 5d0bc9607a8a158b93bdc10c74b94f61 418 Gene3D G3DSA:3.10.290.10 316 418 2.7E-32 T 25-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SMA_RS00665 5d0bc9607a8a158b93bdc10c74b94f61 418 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 43 65 1.4E-27 T 25-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 SMA_RS00665 5d0bc9607a8a158b93bdc10c74b94f61 418 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 182 204 1.4E-27 T 25-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 SMA_RS00665 5d0bc9607a8a158b93bdc10c74b94f61 418 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 161 176 1.4E-27 T 25-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 SMA_RS00665 5d0bc9607a8a158b93bdc10c74b94f61 418 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 215 227 1.4E-27 T 25-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 SMA_RS00665 5d0bc9607a8a158b93bdc10c74b94f61 418 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 2 417 1.5E-129 T 25-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 SMA_RS00665 5d0bc9607a8a158b93bdc10c74b94f61 418 Gene3D G3DSA:1.10.240.10 232 315 2.2E-43 T 25-04-2016 SMA_RS00665 5d0bc9607a8a158b93bdc10c74b94f61 418 Gene3D G3DSA:3.40.50.620 2 231 1.5E-100 T 25-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SMA_RS00665 5d0bc9607a8a158b93bdc10c74b94f61 418 SMART SM00363 353 414 1.0E-6 T 25-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SMA_RS00665 5d0bc9607a8a158b93bdc10c74b94f61 418 PANTHER PTHR11766:SF0 2 415 1.0E-207 T 25-04-2016 SMA_RS00665 5d0bc9607a8a158b93bdc10c74b94f61 418 SUPERFAMILY SSF52374 2 322 4.97E-109 T 25-04-2016 SMA_RS00665 5d0bc9607a8a158b93bdc10c74b94f61 418 Pfam PF01479 S4 domain 355 399 4.6E-9 T 25-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SMA_RS00665 5d0bc9607a8a158b93bdc10c74b94f61 418 Pfam PF00579 tRNA synthetases class I (W and Y) 29 322 6.4E-83 T 25-04-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SMA_RS00665 5d0bc9607a8a158b93bdc10c74b94f61 418 Hamap MF_02006 Tyrosine--tRNA ligase [tyrS]. 1 418 44.646 T 25-04-2016 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 GO:0004831 KEGG: 00970+6.1.1.1 SMA_RS00665 5d0bc9607a8a158b93bdc10c74b94f61 418 SUPERFAMILY SSF55174 321 417 4.45E-23 T 25-04-2016 SMA_RS00665 5d0bc9607a8a158b93bdc10c74b94f61 418 PANTHER PTHR11766 2 415 1.0E-207 T 25-04-2016 IPR024088 Tyrosine-tRNA ligase, bacterial-type GO:0004831 KEGG: 00970+6.1.1.1 SMA_RS00665 5d0bc9607a8a158b93bdc10c74b94f61 418 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 39 49 - T 25-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SMA_RS03510 309ac672904c738f175a953d5a652fce 296 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 6 288 41.945 T 25-04-2016 IPR005337 RapZ-like family GO:0005524 SMA_RS03510 309ac672904c738f175a953d5a652fce 296 PANTHER PTHR30448:SF0 1 295 1.6E-151 T 25-04-2016 SMA_RS03510 309ac672904c738f175a953d5a652fce 296 SUPERFAMILY SSF52540 4 160 6.64E-13 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS03510 309ac672904c738f175a953d5a652fce 296 PIRSF PIRSF005052 6 291 2.7E-108 T 25-04-2016 IPR005337 RapZ-like family GO:0005524 SMA_RS03510 309ac672904c738f175a953d5a652fce 296 PANTHER PTHR30448 1 295 1.6E-151 T 25-04-2016 SMA_RS03510 309ac672904c738f175a953d5a652fce 296 Pfam PF03668 P-loop ATPase protein family 6 289 1.6E-104 T 25-04-2016 IPR005337 RapZ-like family GO:0005524 SMA_RS03510 309ac672904c738f175a953d5a652fce 296 Gene3D G3DSA:3.40.50.300 4 161 1.9E-17 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS00655 e0f5b2dc8e10ffaa8b3f33f026d654c6 236 Gene3D G3DSA:3.40.50.300 3 213 1.4E-56 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS00655 e0f5b2dc8e10ffaa8b3f33f026d654c6 236 Pfam PF00005 ABC transporter 19 165 1.4E-26 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMA_RS00655 e0f5b2dc8e10ffaa8b3f33f026d654c6 236 SMART SM00382 28 215 1.5E-14 T 25-04-2016 IPR003593 AAA+ ATPase domain SMA_RS00655 e0f5b2dc8e10ffaa8b3f33f026d654c6 236 PANTHER PTHR24220 5 207 7.7E-64 T 25-04-2016 SMA_RS00655 e0f5b2dc8e10ffaa8b3f33f026d654c6 236 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SMA_RS00655 e0f5b2dc8e10ffaa8b3f33f026d654c6 236 SUPERFAMILY SSF52540 3 215 2.13E-52 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS07110 f89c7a1a6a3b0ea7c2fa7b0f6d9445d8 450 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 166 253 7.4E-15 T 25-04-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SMA_RS07110 f89c7a1a6a3b0ea7c2fa7b0f6d9445d8 450 Gene3D G3DSA:3.40.120.10 250 368 2.0E-37 T 25-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SMA_RS07110 f89c7a1a6a3b0ea7c2fa7b0f6d9445d8 450 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 257 366 5.0E-32 T 25-04-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SMA_RS07110 f89c7a1a6a3b0ea7c2fa7b0f6d9445d8 450 PANTHER PTHR22573:SF15 1 448 3.3E-163 T 25-04-2016 SMA_RS07110 f89c7a1a6a3b0ea7c2fa7b0f6d9445d8 450 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 1 446 44.066 T 25-04-2016 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SMA_RS07110 f89c7a1a6a3b0ea7c2fa7b0f6d9445d8 450 Gene3D G3DSA:3.40.120.10 175 249 5.0E-21 T 25-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SMA_RS07110 f89c7a1a6a3b0ea7c2fa7b0f6d9445d8 450 SUPERFAMILY SSF55957 357 448 2.49E-24 T 25-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SMA_RS07110 f89c7a1a6a3b0ea7c2fa7b0f6d9445d8 450 SUPERFAMILY SSF53738 3 179 4.32E-42 T 25-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SMA_RS07110 f89c7a1a6a3b0ea7c2fa7b0f6d9445d8 450 PANTHER PTHR22573 1 448 3.3E-163 T 25-04-2016 SMA_RS07110 f89c7a1a6a3b0ea7c2fa7b0f6d9445d8 450 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 94 108 7.7E-12 T 25-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SMA_RS07110 f89c7a1a6a3b0ea7c2fa7b0f6d9445d8 450 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 173 192 7.7E-12 T 25-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SMA_RS07110 f89c7a1a6a3b0ea7c2fa7b0f6d9445d8 450 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 233 248 7.7E-12 T 25-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SMA_RS07110 f89c7a1a6a3b0ea7c2fa7b0f6d9445d8 450 Gene3D G3DSA:3.40.120.10 3 151 2.2E-44 T 25-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SMA_RS07110 f89c7a1a6a3b0ea7c2fa7b0f6d9445d8 450 Gene3D G3DSA:3.30.310.50 369 446 1.2E-21 T 25-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SMA_RS07110 f89c7a1a6a3b0ea7c2fa7b0f6d9445d8 450 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 95 104 - T 25-04-2016 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SMA_RS07110 f89c7a1a6a3b0ea7c2fa7b0f6d9445d8 450 SUPERFAMILY SSF53738 257 365 2.9E-31 T 25-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SMA_RS07110 f89c7a1a6a3b0ea7c2fa7b0f6d9445d8 450 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 373 443 1.9E-17 T 25-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SMA_RS07110 f89c7a1a6a3b0ea7c2fa7b0f6d9445d8 450 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 5 444 9.4E-193 T 25-04-2016 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SMA_RS07110 f89c7a1a6a3b0ea7c2fa7b0f6d9445d8 450 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 3 134 3.0E-41 T 25-04-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SMA_RS07110 f89c7a1a6a3b0ea7c2fa7b0f6d9445d8 450 SUPERFAMILY SSF53738 157 255 3.65E-23 T 25-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SMA_RS08670 b366d0946756d9fe85dab694c7ad4206 488 Hamap MF_00120 Glutamyl-tRNA(Gln) amidotransferase subunit A [gatA]. 11 475 89.985 T 25-04-2016 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 SMA_RS08670 b366d0946756d9fe85dab694c7ad4206 488 Gene3D G3DSA:3.90.1300.10 3 482 1.2E-168 T 25-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 SMA_RS08670 b366d0946756d9fe85dab694c7ad4206 488 PANTHER PTHR11895 2 481 4.2E-217 T 25-04-2016 IPR000120 Amidase GO:0016884 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 SMA_RS08670 b366d0946756d9fe85dab694c7ad4206 488 PANTHER PTHR11895:SF7 2 481 4.2E-217 T 25-04-2016 SMA_RS08670 b366d0946756d9fe85dab694c7ad4206 488 SUPERFAMILY SSF75304 1 481 2.62E-155 T 25-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 SMA_RS08670 b366d0946756d9fe85dab694c7ad4206 488 ProSitePatterns PS00571 Amidases signature. 150 181 - T 25-04-2016 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 SMA_RS08670 b366d0946756d9fe85dab694c7ad4206 488 TIGRFAM TIGR00132 gatA: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit 12 475 6.3E-186 T 25-04-2016 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 SMA_RS08670 b366d0946756d9fe85dab694c7ad4206 488 Pfam PF01425 Amidase 24 463 1.6E-150 T 25-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 SMA_RS10105 735c1c0a76fb358bd9331919e406ead0 323 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 241 323 5.0E-38 T 25-04-2016 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 SMA_RS10105 735c1c0a76fb358bd9331919e406ead0 323 Gene3D G3DSA:1.10.10.10 248 319 1.7E-32 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMA_RS10105 735c1c0a76fb358bd9331919e406ead0 323 Gene3D G3DSA:1.10.8.60 174 246 3.8E-33 T 25-04-2016 SMA_RS10105 735c1c0a76fb358bd9331919e406ead0 323 PANTHER PTHR13779 3 323 8.5E-176 T 25-04-2016 SMA_RS10105 735c1c0a76fb358bd9331919e406ead0 323 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 323 164.967 T 25-04-2016 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 SMA_RS10105 735c1c0a76fb358bd9331919e406ead0 323 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 15 317 9.0E-142 T 25-04-2016 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 SMA_RS10105 735c1c0a76fb358bd9331919e406ead0 323 SUPERFAMILY SSF46785 248 319 2.63E-23 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMA_RS10105 735c1c0a76fb358bd9331919e406ead0 323 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 3 226 3.5E-114 T 25-04-2016 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 SMA_RS10105 735c1c0a76fb358bd9331919e406ead0 323 SMART SM00382 42 175 5.5E-9 T 25-04-2016 IPR003593 AAA+ ATPase domain SMA_RS10105 735c1c0a76fb358bd9331919e406ead0 323 Gene3D G3DSA:3.40.50.300 11 166 4.5E-32 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS10105 735c1c0a76fb358bd9331919e406ead0 323 SUPERFAMILY SSF52540 11 239 5.94E-54 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS10105 735c1c0a76fb358bd9331919e406ead0 323 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 244 317 1.7E-31 T 25-04-2016 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 SMA_RS10105 735c1c0a76fb358bd9331919e406ead0 323 PANTHER PTHR13779:SF25 3 323 8.5E-176 T 25-04-2016 SMA_RS06805 4b43e2085dc62b50ca664187bed0f3aa 230 SMART SM00530 6 61 1.9E-14 T 25-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SMA_RS06805 4b43e2085dc62b50ca664187bed0f3aa 230 Pfam PF01381 Helix-turn-helix 7 61 3.1E-14 T 25-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SMA_RS06805 4b43e2085dc62b50ca664187bed0f3aa 230 Gene3D G3DSA:2.10.109.10 109 224 3.6E-16 T 25-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain SMA_RS06805 4b43e2085dc62b50ca664187bed0f3aa 230 SUPERFAMILY SSF51306 109 225 9.59E-22 T 25-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C SMA_RS06805 4b43e2085dc62b50ca664187bed0f3aa 230 Gene3D G3DSA:1.10.260.40 1 61 3.1E-17 T 25-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SMA_RS06805 4b43e2085dc62b50ca664187bed0f3aa 230 SUPERFAMILY SSF47413 2 65 3.33E-15 T 25-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SMA_RS06805 4b43e2085dc62b50ca664187bed0f3aa 230 Pfam PF00717 Peptidase S24-like 144 208 1.3E-9 T 25-04-2016 IPR019759 Peptidase S24/S26A/S26B SMA_RS06610 89b59146492550c800739f73ceac4d2e 437 ProSitePatterns PS00905 GTP1/OBG family signature. 214 227 - T 25-04-2016 IPR006074 GTP1/OBG, conserved site GO:0005525 SMA_RS06610 89b59146492550c800739f73ceac4d2e 437 Pfam PF09269 Domain of unknown function (DUF1967) 367 435 8.5E-26 T 25-04-2016 IPR015349 GTP-binding protein OBG, C-terminal GO:0000166 SMA_RS06610 89b59146492550c800739f73ceac4d2e 437 Hamap MF_01454 GTPase Obg [obg]. 3 338 47.004 T 25-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 SMA_RS06610 89b59146492550c800739f73ceac4d2e 437 SUPERFAMILY SSF52540 152 339 7.48E-52 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS06610 89b59146492550c800739f73ceac4d2e 437 TIGRFAM TIGR03595 Obg_CgtA_exten: Obg family GTPase CgtA, C-terminal extension 367 436 2.0E-26 T 25-04-2016 IPR015349 GTP-binding protein OBG, C-terminal GO:0000166 SMA_RS06610 89b59146492550c800739f73ceac4d2e 437 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 162 331 5.9E-12 T 25-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 SMA_RS06610 89b59146492550c800739f73ceac4d2e 437 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 4 337 1.7E-139 T 25-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 SMA_RS06610 89b59146492550c800739f73ceac4d2e 437 PANTHER PTHR11702:SF3 4 375 3.1E-164 T 25-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 SMA_RS06610 89b59146492550c800739f73ceac4d2e 437 PANTHER PTHR11702 4 375 3.1E-164 T 25-04-2016 SMA_RS06610 89b59146492550c800739f73ceac4d2e 437 SUPERFAMILY SSF102741 364 437 1.96E-24 T 25-04-2016 IPR015349 GTP-binding protein OBG, C-terminal GO:0000166 SMA_RS06610 89b59146492550c800739f73ceac4d2e 437 Gene3D G3DSA:2.70.210.12 3 157 1.1E-58 T 25-04-2016 IPR006169 GTP1/OBG domain GO:0005525 SMA_RS06610 89b59146492550c800739f73ceac4d2e 437 Pfam PF01018 GTP1/OBG 4 159 1.3E-61 T 25-04-2016 IPR006169 GTP1/OBG domain GO:0005525 SMA_RS06610 89b59146492550c800739f73ceac4d2e 437 Pfam PF01926 50S ribosome-binding GTPase 162 285 5.7E-22 T 25-04-2016 IPR006073 GTP binding domain GO:0005525 SMA_RS06610 89b59146492550c800739f73ceac4d2e 437 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 212 227 2.1E-34 T 25-04-2016 IPR006073 GTP binding domain GO:0005525 SMA_RS06610 89b59146492550c800739f73ceac4d2e 437 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 184 202 2.1E-34 T 25-04-2016 IPR006073 GTP binding domain GO:0005525 SMA_RS06610 89b59146492550c800739f73ceac4d2e 437 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 229 247 2.1E-34 T 25-04-2016 IPR006073 GTP binding domain GO:0005525 SMA_RS06610 89b59146492550c800739f73ceac4d2e 437 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 163 183 2.1E-34 T 25-04-2016 IPR006073 GTP binding domain GO:0005525 SMA_RS06610 89b59146492550c800739f73ceac4d2e 437 SUPERFAMILY SSF82051 3 159 3.66E-55 T 25-04-2016 IPR006169 GTP1/OBG domain GO:0005525 SMA_RS06610 89b59146492550c800739f73ceac4d2e 437 Gene3D G3DSA:3.40.50.300 161 341 3.4E-55 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS06535 df29d3c5eeb5b46b83d6977603759f09 370 SUPERFAMILY SSF53383 50 369 3.82E-78 T 25-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SMA_RS06535 df29d3c5eeb5b46b83d6977603759f09 370 PANTHER PTHR11751:SF388 48 369 7.7E-89 T 25-04-2016 SMA_RS06535 df29d3c5eeb5b46b83d6977603759f09 370 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 218 231 - T 25-04-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Reactome: REACT_13 SMA_RS06535 df29d3c5eeb5b46b83d6977603759f09 370 Gene3D G3DSA:3.90.1150.10 241 369 4.1E-22 T 25-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SMA_RS06535 df29d3c5eeb5b46b83d6977603759f09 370 Pfam PF00155 Aminotransferase class I and II 56 360 4.6E-41 T 25-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 SMA_RS06535 df29d3c5eeb5b46b83d6977603759f09 370 Gene3D G3DSA:3.40.640.10 50 240 5.4E-53 T 25-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SMA_RS06535 df29d3c5eeb5b46b83d6977603759f09 370 PANTHER PTHR11751 48 369 7.7E-89 T 25-04-2016 SMA_RS03345 6fb149a0e3c45747550ea50e08656c3d 323 PIRSF PIRSF007487 1 318 9.5E-98 T 25-04-2016 IPR021176 Competence-induced protein CoiA-like, bacterial SMA_RS03345 6fb149a0e3c45747550ea50e08656c3d 323 PANTHER PTHR41265 1 312 9.4E-50 T 25-04-2016 SMA_RS03345 6fb149a0e3c45747550ea50e08656c3d 323 Pfam PF06054 Competence protein CoiA-like family 21 267 1.2E-35 T 25-04-2016 IPR010330 Competence-induced protein CoiA-like SMA_RS03345 6fb149a0e3c45747550ea50e08656c3d 323 PANTHER PTHR41265:SF1 1 312 9.4E-50 T 25-04-2016 SMA_RS04050 59fe9aec45342d9328fb64afaf39f78a 553 SMART SM00849 16 212 1.1E-21 T 25-04-2016 IPR001279 Metallo-beta-lactamase SMA_RS04050 59fe9aec45342d9328fb64afaf39f78a 553 Pfam PF00753 Metallo-beta-lactamase superfamily 18 163 1.9E-15 T 25-04-2016 IPR001279 Metallo-beta-lactamase SMA_RS04050 59fe9aec45342d9328fb64afaf39f78a 553 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 359 404 2.0E-10 T 25-04-2016 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain SMA_RS04050 59fe9aec45342d9328fb64afaf39f78a 553 TIGRFAM TIGR00649 MG423: beta-CASP ribonuclease, RNase J family 4 550 6.0E-152 T 25-04-2016 IPR004613 Ribonuclease J GO:0003723|GO:0046872 SMA_RS04050 59fe9aec45342d9328fb64afaf39f78a 553 PANTHER PTHR11203 1 553 2.4E-267 T 25-04-2016 SMA_RS04050 59fe9aec45342d9328fb64afaf39f78a 553 Hamap MF_01491 Ribonuclease J [rnj]. 1 552 38.69 T 25-04-2016 IPR030854 Ribonuclease J, bacteria GO:0004521|GO:0004534|GO:0006396|GO:0008270|GO:0090501 SMA_RS04050 59fe9aec45342d9328fb64afaf39f78a 553 Gene3D G3DSA:3.60.15.10 2 253 1.8E-66 T 25-04-2016 IPR001279 Metallo-beta-lactamase SMA_RS04050 59fe9aec45342d9328fb64afaf39f78a 553 SUPERFAMILY SSF56281 4 419 1.78E-70 T 25-04-2016 IPR001279 Metallo-beta-lactamase SMA_RS04050 59fe9aec45342d9328fb64afaf39f78a 553 PANTHER PTHR11203:SF38 1 553 2.4E-267 T 25-04-2016 SMA_RS04860 4c35245266ebf42d9f281ef769a4a39f 276 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 12 272 2.7E-67 T 25-04-2016 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 SMA_RS04860 4c35245266ebf42d9f281ef769a4a39f 276 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 175 187 9.4E-5 T 25-04-2016 SMA_RS04860 4c35245266ebf42d9f281ef769a4a39f 276 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 113 127 9.4E-5 T 25-04-2016 SMA_RS04860 4c35245266ebf42d9f281ef769a4a39f 276 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 214 238 9.4E-5 T 25-04-2016 SMA_RS04860 4c35245266ebf42d9f281ef769a4a39f 276 SUPERFAMILY SSF53335 1 254 5.08E-49 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMA_RS04860 4c35245266ebf42d9f281ef769a4a39f 276 Gene3D G3DSA:1.10.8.10 1 84 1.7E-8 T 25-04-2016 SMA_RS04860 4c35245266ebf42d9f281ef769a4a39f 276 Pfam PF05175 Methyltransferase small domain 106 189 1.9E-20 T 25-04-2016 IPR007848 Methyltransferase small domain GO:0008168 SMA_RS04860 4c35245266ebf42d9f281ef769a4a39f 276 Gene3D G3DSA:3.40.50.150 86 273 4.1E-63 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMA_RS04860 4c35245266ebf42d9f281ef769a4a39f 276 PANTHER PTHR18895 37 273 2.8E-78 T 25-04-2016 SMA_RS04860 4c35245266ebf42d9f281ef769a4a39f 276 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 1 275 39.064 T 25-04-2016 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 SMA_RS04860 4c35245266ebf42d9f281ef769a4a39f 276 PANTHER PTHR18895:SF64 37 273 2.8E-78 T 25-04-2016 SMA_RS04860 4c35245266ebf42d9f281ef769a4a39f 276 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 26 271 5.3E-80 T 25-04-2016 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 SMA_RS04860 4c35245266ebf42d9f281ef769a4a39f 276 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 178 184 - T 25-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 SMA_RS03810 416098327ea6829161dbe5c72efad578 347 PANTHER PTHR11538 97 347 1.2E-110 T 25-04-2016 SMA_RS03810 416098327ea6829161dbe5c72efad578 347 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 43 347 1.5E-107 T 25-04-2016 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 SMA_RS03810 416098327ea6829161dbe5c72efad578 347 SUPERFAMILY SSF46589 24 104 4.08E-19 T 25-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 SMA_RS03810 416098327ea6829161dbe5c72efad578 347 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 25 92 1.4E-21 T 25-04-2016 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 SMA_RS03810 416098327ea6829161dbe5c72efad578 347 SUPERFAMILY SSF55681 97 347 8.23E-83 T 25-04-2016 SMA_RS03810 416098327ea6829161dbe5c72efad578 347 Gene3D G3DSA:3.30.930.10 22 347 2.2E-133 T 25-04-2016 SMA_RS03810 416098327ea6829161dbe5c72efad578 347 Pfam PF01409 tRNA synthetases class II core domain (F) 97 346 1.0E-108 T 25-04-2016 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 SMA_RS03810 416098327ea6829161dbe5c72efad578 347 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 13 346 46.91 T 25-04-2016 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 SMA_RS03230 5410ab151f7d0ea52b1376507733633c 230 SUPERFAMILY SSF53254 1 224 4.04E-71 T 25-04-2016 IPR029033 Histidine phosphatase superfamily SMA_RS03230 5410ab151f7d0ea52b1376507733633c 230 TIGRFAM TIGR01258 pgm_1: phosphoglycerate mutase 1 family 3 229 2.0E-106 T 25-04-2016 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484|UniPathway: UPA00109 SMA_RS03230 5410ab151f7d0ea52b1376507733633c 230 Hamap MF_01039 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [gpmA]. 1 228 43.081 T 25-04-2016 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484|UniPathway: UPA00109 SMA_RS03230 5410ab151f7d0ea52b1376507733633c 230 SMART SM00855 3 189 7.9E-24 T 25-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 SMA_RS03230 5410ab151f7d0ea52b1376507733633c 230 Gene3D G3DSA:3.40.50.1240 1 226 2.3E-90 T 25-04-2016 IPR029033 Histidine phosphatase superfamily SMA_RS03230 5410ab151f7d0ea52b1376507733633c 230 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 123 4.4E-28 T 25-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 SMA_RS03230 5410ab151f7d0ea52b1376507733633c 230 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 128 219 1.3E-5 T 25-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 SMA_RS03230 5410ab151f7d0ea52b1376507733633c 230 PANTHER PTHR11931 1 229 1.1E-138 T 25-04-2016 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484|UniPathway: UPA00109 SMA_RS08380 4aaadadd7d6c74b1f9f0ae6c154d61d2 160 Gene3D G3DSA:1.10.287.180 4 77 8.5E-30 T 25-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 SMA_RS08380 4aaadadd7d6c74b1f9f0ae6c154d61d2 160 SUPERFAMILY SSF46557 5 79 2.22E-25 T 25-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 SMA_RS08380 4aaadadd7d6c74b1f9f0ae6c154d61d2 160 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 19 50 - T 25-04-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 SMA_RS08380 4aaadadd7d6c74b1f9f0ae6c154d61d2 160 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 84 157 3.5E-25 T 25-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 SMA_RS08380 4aaadadd7d6c74b1f9f0ae6c154d61d2 160 SUPERFAMILY SSF54534 83 157 2.59E-18 T 25-04-2016 SMA_RS08380 4aaadadd7d6c74b1f9f0ae6c154d61d2 160 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 122 138 - T 25-04-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 SMA_RS08380 4aaadadd7d6c74b1f9f0ae6c154d61d2 160 Hamap MF_00105 Transcription elongation factor GreA [greA]. 4 157 31.228 T 25-04-2016 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 SMA_RS08380 4aaadadd7d6c74b1f9f0ae6c154d61d2 160 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 7 157 2.6E-53 T 25-04-2016 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 SMA_RS08380 4aaadadd7d6c74b1f9f0ae6c154d61d2 160 PANTHER PTHR30437 1 157 3.2E-58 T 25-04-2016 SMA_RS08380 4aaadadd7d6c74b1f9f0ae6c154d61d2 160 Gene3D G3DSA:3.10.50.30 78 157 4.3E-26 T 25-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 SMA_RS08380 4aaadadd7d6c74b1f9f0ae6c154d61d2 160 Pfam PF03449 Transcription elongation factor, N-terminal 7 76 5.3E-27 T 25-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 SMA_RS08380 4aaadadd7d6c74b1f9f0ae6c154d61d2 160 PIRSF PIRSF006092 1 160 2.1E-46 T 25-04-2016 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 SMA_RS08520 5d07c59e3f868eaad43fb7282103cfc5 284 PANTHER PTHR35092 2 282 1.0E-170 T 25-04-2016 SMA_RS08520 5d07c59e3f868eaad43fb7282103cfc5 284 PIRSF PIRSF006779 2 278 4.0E-98 T 25-04-2016 IPR002747 SAM-dependent chlorinase/fluorinase SMA_RS08520 5d07c59e3f868eaad43fb7282103cfc5 284 PANTHER PTHR35092:SF2 2 282 1.0E-170 T 25-04-2016 SMA_RS08520 5d07c59e3f868eaad43fb7282103cfc5 284 Gene3D G3DSA:2.40.30.90 170 276 7.4E-26 T 25-04-2016 IPR023227 S-adenosyl-l-methionine hydroxide adenosyltransferase, C-terminal SMA_RS08520 5d07c59e3f868eaad43fb7282103cfc5 284 Pfam PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase 6 273 3.5E-69 T 25-04-2016 IPR002747 SAM-dependent chlorinase/fluorinase SMA_RS08520 5d07c59e3f868eaad43fb7282103cfc5 284 SUPERFAMILY SSF101852 174 276 2.35E-27 T 25-04-2016 IPR023227 S-adenosyl-l-methionine hydroxide adenosyltransferase, C-terminal SMA_RS08520 5d07c59e3f868eaad43fb7282103cfc5 284 SUPERFAMILY SSF102522 4 167 1.31E-54 T 25-04-2016 IPR023228 S-adenosyl-l-methionine hydroxide adenosyltransferase, N-terminal SMA_RS01450 9189235005c8ad7069bae4e37b39cae1 286 PANTHER PTHR33434:SF3 1 281 5.2E-69 T 25-04-2016 SMA_RS01450 9189235005c8ad7069bae4e37b39cae1 286 PANTHER PTHR33434 1 281 5.2E-69 T 25-04-2016 SMA_RS01450 9189235005c8ad7069bae4e37b39cae1 286 Pfam PF02645 Uncharacterised protein, DegV family COG1307 3 281 2.0E-81 T 25-04-2016 IPR003797 DegV SMA_RS01450 9189235005c8ad7069bae4e37b39cae1 286 Gene3D G3DSA:3.40.50.10170 1 152 9.8E-42 T 25-04-2016 SMA_RS01450 9189235005c8ad7069bae4e37b39cae1 286 Gene3D G3DSA:3.30.1180.10 158 283 5.3E-40 T 25-04-2016 SMA_RS01450 9189235005c8ad7069bae4e37b39cae1 286 SUPERFAMILY SSF82549 1 283 5.23E-79 T 25-04-2016 SMA_RS01450 9189235005c8ad7069bae4e37b39cae1 286 TIGRFAM TIGR00762 DegV: EDD domain protein, DegV family 3 280 5.1E-85 T 25-04-2016 IPR003797 DegV SMA_RS09180 89ed2fc1e8a02450bc40270421979412 337 SUPERFAMILY SSF55347 152 316 3.27E-62 T 25-04-2016 SMA_RS09180 89ed2fc1e8a02450bc40270421979412 337 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 152 1.5E-51 T 25-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 SMA_RS09180 89ed2fc1e8a02450bc40270421979412 337 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 267 282 1.3E-25 T 25-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 SMA_RS09180 89ed2fc1e8a02450bc40270421979412 337 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 110 123 1.3E-25 T 25-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 SMA_RS09180 89ed2fc1e8a02450bc40270421979412 337 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 231 248 1.3E-25 T 25-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 SMA_RS09180 89ed2fc1e8a02450bc40270421979412 337 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 173 189 1.3E-25 T 25-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 SMA_RS09180 89ed2fc1e8a02450bc40270421979412 337 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 146 164 1.3E-25 T 25-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 SMA_RS09180 89ed2fc1e8a02450bc40270421979412 337 PIRSF PIRSF000149 1 337 1.4E-110 T 25-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 SMA_RS09180 89ed2fc1e8a02450bc40270421979412 337 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 157 315 5.9E-59 T 25-04-2016 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: REACT_474 SMA_RS09180 89ed2fc1e8a02450bc40270421979412 337 SUPERFAMILY SSF51735 3 168 8.94E-57 T 25-04-2016 IPR016040 NAD(P)-binding domain SMA_RS09180 89ed2fc1e8a02450bc40270421979412 337 SMART SM00846 3 152 9.2E-82 T 25-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 SMA_RS09180 89ed2fc1e8a02450bc40270421979412 337 Gene3D G3DSA:3.30.360.10 161 317 1.9E-62 T 25-04-2016 SMA_RS09180 89ed2fc1e8a02450bc40270421979412 337 PANTHER PTHR10836:SF57 1 335 2.6E-223 T 25-04-2016 SMA_RS09180 89ed2fc1e8a02450bc40270421979412 337 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 327 3.0E-128 T 25-04-2016 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: REACT_474|UniPathway: UPA00109 SMA_RS09180 89ed2fc1e8a02450bc40270421979412 337 PANTHER PTHR10836 1 335 2.6E-223 T 25-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 SMA_RS09180 89ed2fc1e8a02450bc40270421979412 337 Gene3D G3DSA:3.40.50.720 1 160 6.7E-66 T 25-04-2016 IPR016040 NAD(P)-binding domain SMA_RS10380 3735ff7c796166ce91492828480ebf3c 218 Gene3D G3DSA:1.10.530.10 148 194 9.0E-9 T 25-04-2016 SMA_RS10380 3735ff7c796166ce91492828480ebf3c 218 SUPERFAMILY SSF53955 147 209 4.22E-11 T 25-04-2016 IPR023346 Lysozyme-like domain SMA_RS10380 3735ff7c796166ce91492828480ebf3c 218 Pfam PF01464 Transglycosylase SLT domain 148 190 1.1E-6 T 25-04-2016 IPR008258 Transglycosylase SLT domain 1 SMA_RS00320 d45911566f9238bea94110d447eb629f 207 PANTHER PTHR26402:SF151 2 207 1.1E-45 T 25-04-2016 SMA_RS00320 d45911566f9238bea94110d447eb629f 207 SMART SM00448 2 114 1.3E-23 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMA_RS00320 d45911566f9238bea94110d447eb629f 207 Gene3D G3DSA:3.40.50.2300 3 152 2.4E-28 T 25-04-2016 SMA_RS00320 d45911566f9238bea94110d447eb629f 207 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 147 161 3.1E-8 T 25-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SMA_RS00320 d45911566f9238bea94110d447eb629f 207 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 161 177 3.1E-8 T 25-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SMA_RS00320 d45911566f9238bea94110d447eb629f 207 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 177 189 3.1E-8 T 25-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SMA_RS00320 d45911566f9238bea94110d447eb629f 207 Pfam PF00072 Response regulator receiver domain 4 114 4.2E-24 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMA_RS00320 d45911566f9238bea94110d447eb629f 207 Pfam PF00196 Bacterial regulatory proteins, luxR family 148 201 1.1E-15 T 25-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SMA_RS00320 d45911566f9238bea94110d447eb629f 207 SMART SM00421 144 201 1.2E-16 T 25-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SMA_RS00320 d45911566f9238bea94110d447eb629f 207 SUPERFAMILY SSF46894 148 207 1.67E-16 T 25-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SMA_RS00320 d45911566f9238bea94110d447eb629f 207 PANTHER PTHR26402 2 207 1.1E-45 T 25-04-2016 SMA_RS00320 d45911566f9238bea94110d447eb629f 207 SUPERFAMILY SSF52172 3 119 5.55E-25 T 25-04-2016 IPR011006 CheY-like superfamily SMA_RS00320 d45911566f9238bea94110d447eb629f 207 Gene3D G3DSA:1.10.10.10 153 207 2.1E-20 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMA_RS03650 e1731bbcfc9071fa592e005f6e75fb36 196 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 1 195 40.778 T 25-04-2016 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SMA_RS03650 e1731bbcfc9071fa592e005f6e75fb36 196 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 1 184 1.9E-66 T 25-04-2016 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SMA_RS03650 e1731bbcfc9071fa592e005f6e75fb36 196 Gene3D G3DSA:3.20.19.10 1 191 4.9E-47 T 25-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel SMA_RS03650 e1731bbcfc9071fa592e005f6e75fb36 196 SUPERFAMILY SSF52016 1 193 7.85E-57 T 25-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel SMA_RS03650 e1731bbcfc9071fa592e005f6e75fb36 196 PANTHER PTHR11670:SF27 1 196 5.5E-96 T 25-04-2016 SMA_RS03650 e1731bbcfc9071fa592e005f6e75fb36 196 Pfam PF00694 Aconitase C-terminal domain 1 122 7.8E-39 T 25-04-2016 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SMA_RS03650 e1731bbcfc9071fa592e005f6e75fb36 196 PANTHER PTHR11670 1 196 5.5E-96 T 25-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SMA_RS05320 c7b22f36d1be75aec54df8bf53f6659f 267 SUPERFAMILY SSF52540 18 254 7.94E-58 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS05320 c7b22f36d1be75aec54df8bf53f6659f 267 PANTHER PTHR24220:SF506 22 265 2.2E-135 T 25-04-2016 SMA_RS05320 c7b22f36d1be75aec54df8bf53f6659f 267 SMART SM00382 45 239 7.1E-12 T 25-04-2016 IPR003593 AAA+ ATPase domain SMA_RS05320 c7b22f36d1be75aec54df8bf53f6659f 267 Gene3D G3DSA:3.40.50.300 18 258 9.0E-64 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS05320 c7b22f36d1be75aec54df8bf53f6659f 267 PANTHER PTHR24220 22 265 2.2E-135 T 25-04-2016 SMA_RS05320 c7b22f36d1be75aec54df8bf53f6659f 267 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 21 267 3.4E-122 T 25-04-2016 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 SMA_RS05320 c7b22f36d1be75aec54df8bf53f6659f 267 ProSitePatterns PS00211 ABC transporters family signature. 164 178 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SMA_RS05320 c7b22f36d1be75aec54df8bf53f6659f 267 Pfam PF00005 ABC transporter 37 191 1.1E-29 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMA_RS09045 41d497004e234b5509e86b5b64e1ba06 225 Gene3D G3DSA:1.10.10.10 125 222 5.6E-36 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMA_RS09045 41d497004e234b5509e86b5b64e1ba06 225 SMART SM00448 1 113 2.1E-29 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMA_RS09045 41d497004e234b5509e86b5b64e1ba06 225 SUPERFAMILY SSF46894 122 221 1.13E-31 T 25-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SMA_RS09045 41d497004e234b5509e86b5b64e1ba06 225 Pfam PF00486 Transcriptional regulatory protein, C terminal 147 220 1.6E-28 T 25-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SMA_RS09045 41d497004e234b5509e86b5b64e1ba06 225 SUPERFAMILY SSF52172 2 128 2.13E-35 T 25-04-2016 IPR011006 CheY-like superfamily SMA_RS09045 41d497004e234b5509e86b5b64e1ba06 225 PANTHER PTHR26402:SF614 1 221 1.1E-76 T 25-04-2016 SMA_RS09045 41d497004e234b5509e86b5b64e1ba06 225 Gene3D G3DSA:3.40.50.2300 2 124 2.1E-33 T 25-04-2016 SMA_RS09045 41d497004e234b5509e86b5b64e1ba06 225 PANTHER PTHR26402 1 221 1.1E-76 T 25-04-2016 SMA_RS09045 41d497004e234b5509e86b5b64e1ba06 225 Pfam PF00072 Response regulator receiver domain 2 113 3.6E-23 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMA_RS09045 41d497004e234b5509e86b5b64e1ba06 225 SMART SM00862 147 220 1.7E-30 T 25-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SMA_RS03320 9398abbcf32a0498d555bb7f43fd6dc5 241 Gene3D G3DSA:1.10.10.200 1 77 2.0E-33 T 25-04-2016 IPR017856 Integrase, N-terminal zinc-binding domain-like SMA_RS03320 9398abbcf32a0498d555bb7f43fd6dc5 241 PANTHER PTHR12532 1 241 1.6E-106 T 25-04-2016 IPR002876 Transcriptional regulator TACO1-like SMA_RS03320 9398abbcf32a0498d555bb7f43fd6dc5 241 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 3 241 36.418 T 25-04-2016 IPR002876 Transcriptional regulator TACO1-like SMA_RS03320 9398abbcf32a0498d555bb7f43fd6dc5 241 SUPERFAMILY SSF75625 3 239 1.57E-91 T 25-04-2016 IPR029072 YebC-like SMA_RS03320 9398abbcf32a0498d555bb7f43fd6dc5 241 Pfam PF01709 Transcriptional regulator 5 239 4.4E-93 T 25-04-2016 IPR002876 Transcriptional regulator TACO1-like SMA_RS03320 9398abbcf32a0498d555bb7f43fd6dc5 241 Gene3D G3DSA:3.30.1270.10 214 240 1.2E-35 T 25-04-2016 IPR026563 Transcriptional regulator TACO1-like, domain 2 SMA_RS03320 9398abbcf32a0498d555bb7f43fd6dc5 241 Gene3D G3DSA:3.30.1270.10 82 134 1.2E-35 T 25-04-2016 IPR026563 Transcriptional regulator TACO1-like, domain 2 SMA_RS03320 9398abbcf32a0498d555bb7f43fd6dc5 241 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 1 239 9.3E-98 T 25-04-2016 IPR002876 Transcriptional regulator TACO1-like SMA_RS03320 9398abbcf32a0498d555bb7f43fd6dc5 241 Gene3D G3DSA:3.30.70.980 135 207 3.0E-27 T 25-04-2016 IPR026564 Transcriptional regulator TACO1-like, domain 3 SMA_RS07065 76adc4510207ce61a8b4c193929cc9b8 138 SUPERFAMILY SSF54919 1 137 9.04E-54 T 25-04-2016 SMA_RS07065 76adc4510207ce61a8b4c193929cc9b8 138 PANTHER PTHR11349 1 138 1.7E-67 T 25-04-2016 SMA_RS07065 76adc4510207ce61a8b4c193929cc9b8 138 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 1 138 30.63 T 25-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SMA_RS07065 76adc4510207ce61a8b4c193929cc9b8 138 PRINTS PR01243 Nucleoside diphosphate kinase signature 48 67 8.1E-35 T 25-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SMA_RS07065 76adc4510207ce61a8b4c193929cc9b8 138 PRINTS PR01243 Nucleoside diphosphate kinase signature 68 85 8.1E-35 T 25-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SMA_RS07065 76adc4510207ce61a8b4c193929cc9b8 138 PRINTS PR01243 Nucleoside diphosphate kinase signature 117 136 8.1E-35 T 25-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SMA_RS07065 76adc4510207ce61a8b4c193929cc9b8 138 PRINTS PR01243 Nucleoside diphosphate kinase signature 4 26 8.1E-35 T 25-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SMA_RS07065 76adc4510207ce61a8b4c193929cc9b8 138 Pfam PF00334 Nucleoside diphosphate kinase 2 137 6.2E-49 T 25-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SMA_RS07065 76adc4510207ce61a8b4c193929cc9b8 138 Gene3D G3DSA:3.30.70.141 1 137 1.1E-55 T 25-04-2016 SMA_RS07065 76adc4510207ce61a8b4c193929cc9b8 138 SMART SM00562 1 138 1.3E-63 T 25-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SMA_RS07065 76adc4510207ce61a8b4c193929cc9b8 138 ProSitePatterns PS00469 Nucleoside diphosphate kinases active site. 117 125 - T 25-04-2016 IPR023005 Nucleoside diphosphate kinase, active site KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SMA_RS01695 b4373423b5e1edcbef2aff543561b8fe 368 PANTHER PTHR13779:SF20 104 366 7.2E-74 T 25-04-2016 SMA_RS01695 b4373423b5e1edcbef2aff543561b8fe 368 Gene3D G3DSA:3.40.50.300 103 293 7.0E-28 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS01695 b4373423b5e1edcbef2aff543561b8fe 368 PANTHER PTHR13779 104 366 7.2E-74 T 25-04-2016 SMA_RS01695 b4373423b5e1edcbef2aff543561b8fe 368 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 144 276 2.5E-18 T 25-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 SMA_RS01695 b4373423b5e1edcbef2aff543561b8fe 368 SMART SM00382 140 279 6.6E-7 T 25-04-2016 IPR003593 AAA+ ATPase domain SMA_RS01695 b4373423b5e1edcbef2aff543561b8fe 368 PRINTS PR00819 CbxX/CfqX superfamily signature 103 117 7.5E-49 T 25-04-2016 IPR000641 CbxX/CfqX GO:0005524 SMA_RS01695 b4373423b5e1edcbef2aff543561b8fe 368 PRINTS PR00819 CbxX/CfqX superfamily signature 264 283 7.5E-49 T 25-04-2016 IPR000641 CbxX/CfqX GO:0005524 SMA_RS01695 b4373423b5e1edcbef2aff543561b8fe 368 PRINTS PR00819 CbxX/CfqX superfamily signature 181 195 7.5E-49 T 25-04-2016 IPR000641 CbxX/CfqX GO:0005524 SMA_RS01695 b4373423b5e1edcbef2aff543561b8fe 368 PRINTS PR00819 CbxX/CfqX superfamily signature 195 214 7.5E-49 T 25-04-2016 IPR000641 CbxX/CfqX GO:0005524 SMA_RS01695 b4373423b5e1edcbef2aff543561b8fe 368 PRINTS PR00819 CbxX/CfqX superfamily signature 143 158 7.5E-49 T 25-04-2016 IPR000641 CbxX/CfqX GO:0005524 SMA_RS01695 b4373423b5e1edcbef2aff543561b8fe 368 PRINTS PR00819 CbxX/CfqX superfamily signature 226 238 7.5E-49 T 25-04-2016 IPR000641 CbxX/CfqX GO:0005524 SMA_RS01695 b4373423b5e1edcbef2aff543561b8fe 368 PRINTS PR00819 CbxX/CfqX superfamily signature 323 335 7.5E-49 T 25-04-2016 IPR000641 CbxX/CfqX GO:0005524 SMA_RS01695 b4373423b5e1edcbef2aff543561b8fe 368 PRINTS PR00819 CbxX/CfqX superfamily signature 247 264 7.5E-49 T 25-04-2016 IPR000641 CbxX/CfqX GO:0005524 SMA_RS01695 b4373423b5e1edcbef2aff543561b8fe 368 SUPERFAMILY SSF52540 103 360 3.79E-34 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS09800 00feed7deaa566b9a40a3a1506787781 335 PANTHER PTHR35800 184 335 1.1E-54 T 25-04-2016 SMA_RS09800 00feed7deaa566b9a40a3a1506787781 335 PANTHER PTHR35800 1 53 1.1E-54 T 25-04-2016 SMA_RS09800 00feed7deaa566b9a40a3a1506787781 335 Pfam PF14804 Jag N-terminus 4 51 2.7E-18 T 25-04-2016 IPR032782 Jag, N-terminal SMA_RS09800 00feed7deaa566b9a40a3a1506787781 335 SUPERFAMILY SSF82708 282 333 1.24E-9 T 25-04-2016 IPR001374 R3H domain GO:0003676 SMA_RS09800 00feed7deaa566b9a40a3a1506787781 335 SMART SM00393 255 334 5.0E-14 T 25-04-2016 IPR001374 R3H domain GO:0003676 SMA_RS09800 00feed7deaa566b9a40a3a1506787781 335 SMART SM01245 3 54 5.4E-21 T 25-04-2016 IPR032782 Jag, N-terminal SMA_RS09800 00feed7deaa566b9a40a3a1506787781 335 Pfam PF01424 R3H domain 273 333 2.0E-13 T 25-04-2016 IPR001374 R3H domain GO:0003676 SMA_RS09800 00feed7deaa566b9a40a3a1506787781 335 Gene3D G3DSA:3.30.30.80 1 51 6.3E-19 T 25-04-2016 IPR032782 Jag, N-terminal SMA_RS09800 00feed7deaa566b9a40a3a1506787781 335 Pfam PF13083 KH domain 191 261 6.8E-17 T 25-04-2016 SMA_RS09800 00feed7deaa566b9a40a3a1506787781 335 Gene3D G3DSA:3.30.300.120 188 264 1.7E-21 T 25-04-2016 SMA_RS09800 00feed7deaa566b9a40a3a1506787781 335 Gene3D G3DSA:3.30.1370.50 266 334 2.1E-24 T 25-04-2016 IPR001374 R3H domain GO:0003676 SMA_RS10140 d1ee79c4f67e5e4a569de00bb132825a 89 PIRSF PIRSF037258 1 87 2.5E-44 T 25-04-2016 IPR009309 Uncharacterised protein family UPF0297 SMA_RS10140 d1ee79c4f67e5e4a569de00bb132825a 89 Hamap MF_01507 UPF0297 protein . 1 84 27.297 T 25-04-2016 IPR009309 Uncharacterised protein family UPF0297 SMA_RS10140 d1ee79c4f67e5e4a569de00bb132825a 89 Pfam PF06135 Bacterial protein of unknown function (DUF965) 5 82 1.1E-36 T 25-04-2016 IPR009309 Uncharacterised protein family UPF0297 SMA_RS10140 d1ee79c4f67e5e4a569de00bb132825a 89 PANTHER PTHR40067 2 88 7.2E-46 T 25-04-2016 SMA_RS09345 5a60605c62a9fa4e77088bdb1f94b77c 174 PANTHER PTHR36439 1 174 2.5E-24 T 25-04-2016 SMA_RS09345 5a60605c62a9fa4e77088bdb1f94b77c 174 Gene3D G3DSA:3.30.70.1280 3 87 1.8E-24 T 25-04-2016 SMA_RS09345 5a60605c62a9fa4e77088bdb1f94b77c 174 Pfam PF08002 Protein of unknown function (DUF1697) 3 135 3.8E-29 T 25-04-2016 IPR012545 Protein of unknown function DUF1697 SMA_RS09345 5a60605c62a9fa4e77088bdb1f94b77c 174 PIRSF PIRSF008502 2 174 5.3E-31 T 25-04-2016 IPR012545 Protein of unknown function DUF1697 SMA_RS09345 5a60605c62a9fa4e77088bdb1f94b77c 174 PANTHER PTHR36439:SF1 1 174 2.5E-24 T 25-04-2016 SMA_RS09345 5a60605c62a9fa4e77088bdb1f94b77c 174 SUPERFAMILY SSF160379 2 174 2.09E-42 T 25-04-2016 SMA_RS07390 3025720b83d6401b331a027880d6a969 269 Gene3D G3DSA:3.30.1240.10 88 182 3.6E-45 T 25-04-2016 SMA_RS07390 3025720b83d6401b331a027880d6a969 269 SUPERFAMILY SSF56784 1 268 1.04E-79 T 25-04-2016 IPR023214 HAD-like domain SMA_RS07390 3025720b83d6401b331a027880d6a969 269 PANTHER PTHR10000:SF16 1 269 8.2E-102 T 25-04-2016 SMA_RS07390 3025720b83d6401b331a027880d6a969 269 Gene3D G3DSA:3.40.50.1000 183 268 5.7E-60 T 25-04-2016 IPR023214 HAD-like domain SMA_RS07390 3025720b83d6401b331a027880d6a969 269 Gene3D G3DSA:3.40.50.1000 1 76 5.7E-60 T 25-04-2016 IPR023214 HAD-like domain SMA_RS07390 3025720b83d6401b331a027880d6a969 269 PANTHER PTHR10000 1 269 8.2E-102 T 25-04-2016 SMA_RS07390 3025720b83d6401b331a027880d6a969 269 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 263 2.0E-70 T 25-04-2016 IPR023214 HAD-like domain SMA_RS07390 3025720b83d6401b331a027880d6a969 269 ProSitePatterns PS01229 Hypothetical cof family signature 2. 217 239 - T 25-04-2016 SMA_RS07390 3025720b83d6401b331a027880d6a969 269 ProSitePatterns PS01228 Hypothetical cof family signature 1. 5 16 - T 25-04-2016 IPR000150 Cof protein GO:0016787 SMA_RS07390 3025720b83d6401b331a027880d6a969 269 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 263 1.4E-65 T 25-04-2016 IPR000150 Cof protein GO:0016787 SMA_RS07390 3025720b83d6401b331a027880d6a969 269 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 236 3.2E-30 T 25-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 SMA_RS00395 d47e57dcc60a40e75be3a3438c795c50 101 ProSitePatterns PS01108 Ribosomal protein L24 signature. 6 23 - T 25-04-2016 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS00395 d47e57dcc60a40e75be3a3438c795c50 101 SUPERFAMILY SSF50104 2 99 1.89E-29 T 25-04-2016 IPR008991 Translation protein SH3-like domain SMA_RS00395 d47e57dcc60a40e75be3a3438c795c50 101 SMART SM00739 2 29 1.8E-5 T 25-04-2016 IPR005824 KOW SMA_RS00395 d47e57dcc60a40e75be3a3438c795c50 101 Pfam PF00467 KOW motif 5 36 4.1E-7 T 25-04-2016 IPR005824 KOW SMA_RS00395 d47e57dcc60a40e75be3a3438c795c50 101 PANTHER PTHR12903 1 101 7.6E-40 T 25-04-2016 SMA_RS00395 d47e57dcc60a40e75be3a3438c795c50 101 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 38 99 8.9E-25 T 25-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS00395 d47e57dcc60a40e75be3a3438c795c50 101 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 1 94 19.785 T 25-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS00395 d47e57dcc60a40e75be3a3438c795c50 101 Gene3D G3DSA:2.30.30.30 1 89 3.1E-20 T 25-04-2016 IPR014722 Ribosomal protein L2 domain 2 SMA_RS00395 d47e57dcc60a40e75be3a3438c795c50 101 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 3 99 1.9E-33 T 25-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS04330 8a4ad1eb51c444e6d06c7023be5d3071 234 PANTHER PTHR11922 1 201 9.0E-38 T 25-04-2016 SMA_RS04330 8a4ad1eb51c444e6d06c7023be5d3071 234 PANTHER PTHR11922:SF11 1 201 9.0E-38 T 25-04-2016 SMA_RS04330 8a4ad1eb51c444e6d06c7023be5d3071 234 SUPERFAMILY SSF52317 14 230 1.24E-34 T 25-04-2016 IPR029062 Class I glutamine amidotransferase-like SMA_RS04330 8a4ad1eb51c444e6d06c7023be5d3071 234 Gene3D G3DSA:3.40.50.880 1 232 6.6E-48 T 25-04-2016 IPR029062 Class I glutamine amidotransferase-like SMA_RS04330 8a4ad1eb51c444e6d06c7023be5d3071 234 Pfam PF00117 Glutamine amidotransferase class-I 22 183 2.1E-17 T 25-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 SMA_RS09190 accbacd163235ac79e4bcaeb1e418f40 156 PIRSF PIRSF002122 2 156 7.0E-56 T 25-04-2016 IPR000235 Ribosomal protein S5/S7 GO:0006412 SMA_RS09190 accbacd163235ac79e4bcaeb1e418f40 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 25-04-2016 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 SMA_RS09190 accbacd163235ac79e4bcaeb1e418f40 156 SUPERFAMILY SSF47973 1 149 1.44E-59 T 25-04-2016 IPR023798 Ribosomal protein S7 domain SMA_RS09190 accbacd163235ac79e4bcaeb1e418f40 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 156 7.4E-69 T 25-04-2016 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 SMA_RS09190 accbacd163235ac79e4bcaeb1e418f40 156 Gene3D G3DSA:1.10.455.10 7 156 1.0E-65 T 25-04-2016 IPR023798 Ribosomal protein S7 domain SMA_RS09190 accbacd163235ac79e4bcaeb1e418f40 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 4.2E-65 T 25-04-2016 IPR023798 Ribosomal protein S7 domain SMA_RS09190 accbacd163235ac79e4bcaeb1e418f40 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 35.523 T 25-04-2016 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 SMA_RS09190 accbacd163235ac79e4bcaeb1e418f40 156 PANTHER PTHR11205 1 156 1.5E-88 T 25-04-2016 IPR000235 Ribosomal protein S5/S7 GO:0006412 SMA_RS03280 e32b48739c703abe0c13d0c1d710397b 526 SUPERFAMILY SSF52540 70 354 3.7E-76 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS03280 e32b48739c703abe0c13d0c1d710397b 526 SMART SM00490 253 334 2.6E-35 T 25-04-2016 IPR001650 Helicase, C-terminal SMA_RS03280 e32b48739c703abe0c13d0c1d710397b 526 SMART SM00487 20 217 4.9E-63 T 25-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain SMA_RS03280 e32b48739c703abe0c13d0c1d710397b 526 Hamap MF_01493 DEAD-box ATP-dependent RNA helicase CshA [cshA]. 1 521 44.961 T 25-04-2016 IPR030880 DEAD-box ATP-dependent RNA helicase CshA GO:0004004|GO:0005524|GO:0010501 SMA_RS03280 e32b48739c703abe0c13d0c1d710397b 526 Gene3D G3DSA:3.40.50.300 208 366 2.2E-53 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS03280 e32b48739c703abe0c13d0c1d710397b 526 PANTHER PTHR24031 2 516 8.7E-237 T 25-04-2016 SMA_RS03280 e32b48739c703abe0c13d0c1d710397b 526 Pfam PF00270 DEAD/DEAH box helicase 26 190 7.5E-51 T 25-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 SMA_RS03280 e32b48739c703abe0c13d0c1d710397b 526 PANTHER PTHR24031:SF261 2 516 8.7E-237 T 25-04-2016 SMA_RS03280 e32b48739c703abe0c13d0c1d710397b 526 Gene3D G3DSA:3.40.50.300 2 207 1.1E-80 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS03280 e32b48739c703abe0c13d0c1d710397b 526 Pfam PF00271 Helicase conserved C-terminal domain 226 334 4.1E-28 T 25-04-2016 IPR001650 Helicase, C-terminal SMA_RS03280 e32b48739c703abe0c13d0c1d710397b 526 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 148 156 - T 25-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site SMA_RS04285 78e8259855242de7ac2f1daf482c34f2 125 PANTHER PTHR42160:SF1 1 124 7.8E-54 T 25-04-2016 SMA_RS04285 78e8259855242de7ac2f1daf482c34f2 125 SUPERFAMILY SSF52141 4 124 1.34E-26 T 25-04-2016 IPR005122 Uracil-DNA glycosylase-like SMA_RS04285 78e8259855242de7ac2f1daf482c34f2 125 Gene3D G3DSA:3.40.470.10 3 123 2.6E-19 T 25-04-2016 IPR005122 Uracil-DNA glycosylase-like SMA_RS04285 78e8259855242de7ac2f1daf482c34f2 125 Pfam PF03167 Uracil DNA glycosylase superfamily 30 104 4.3E-8 T 25-04-2016 IPR005122 Uracil-DNA glycosylase-like SMA_RS04285 78e8259855242de7ac2f1daf482c34f2 125 PANTHER PTHR42160 1 124 7.8E-54 T 25-04-2016 SMA_RS09010 1476936017422677c798d94b44d17457 204 Pfam PF06897 Protein of unknown function (DUF1269) 62 147 2.4E-10 T 25-04-2016 IPR009200 Protein of unknown function DUF1269, membrane associated SMA_RS03715 399beeb39f51f88c207d0f1e4d5edd2d 169 PANTHER PTHR40044:SF1 1 167 9.6E-39 T 25-04-2016 SMA_RS03715 399beeb39f51f88c207d0f1e4d5edd2d 169 PANTHER PTHR40044 1 167 9.6E-39 T 25-04-2016 SMA_RS03715 399beeb39f51f88c207d0f1e4d5edd2d 169 PIRSF PIRSF031501 1 169 4.6E-53 T 25-04-2016 IPR010387 Queuosine precursor transporter QueT GO:0005886 SMA_RS03715 399beeb39f51f88c207d0f1e4d5edd2d 169 Pfam PF06177 QueT transporter 10 161 3.0E-32 T 25-04-2016 IPR010387 Queuosine precursor transporter QueT GO:0005886 SMA_RS01465 6ea76a5afede47fd45a0932574c2fe8a 130 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 1 130 33.594 T 25-04-2016 IPR023035 Ribosomal protein S9, bacterial/plastid SMA_RS01465 6ea76a5afede47fd45a0932574c2fe8a 130 ProSitePatterns PS00360 Ribosomal protein S9 signature. 69 87 - T 25-04-2016 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 SMA_RS01465 6ea76a5afede47fd45a0932574c2fe8a 130 Pfam PF00380 Ribosomal protein S9/S16 10 130 2.0E-49 T 25-04-2016 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 SMA_RS01465 6ea76a5afede47fd45a0932574c2fe8a 130 PANTHER PTHR21569 1 130 6.6E-71 T 25-04-2016 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 SMA_RS01465 6ea76a5afede47fd45a0932574c2fe8a 130 SUPERFAMILY SSF54211 5 130 9.48E-49 T 25-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SMA_RS01465 6ea76a5afede47fd45a0932574c2fe8a 130 Gene3D G3DSA:3.30.230.10 5 130 7.4E-52 T 25-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SMA_RS06620 3b312f562375c43dd4a9d9406c30139e 554 SUPERFAMILY SSF53850 38 544 3.26E-113 T 25-04-2016 SMA_RS06620 3b312f562375c43dd4a9d9406c30139e 554 Gene3D G3DSA:3.10.105.10 302 524 1.3E-43 T 25-04-2016 SMA_RS06620 3b312f562375c43dd4a9d9406c30139e 554 PANTHER PTHR30290:SF10 3 552 2.4E-137 T 25-04-2016 SMA_RS06620 3b312f562375c43dd4a9d9406c30139e 554 PIRSF PIRSF002741 5 554 6.8E-86 T 25-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 SMA_RS06620 3b312f562375c43dd4a9d9406c30139e 554 Gene3D G3DSA:3.90.76.10 52 228 2.6E-45 T 25-04-2016 SMA_RS06620 3b312f562375c43dd4a9d9406c30139e 554 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 85 474 1.1E-74 T 25-04-2016 IPR000914 Solute-binding protein family 5 domain SMA_RS06620 3b312f562375c43dd4a9d9406c30139e 554 PANTHER PTHR30290 3 552 2.4E-137 T 25-04-2016 SMA_RS02260 c492867fc42f70641d906a616fa7ae15 270 PANTHER PTHR10000:SF16 1 270 2.9E-75 T 25-04-2016 SMA_RS02260 c492867fc42f70641d906a616fa7ae15 270 Gene3D G3DSA:3.40.50.1000 184 269 1.3E-58 T 25-04-2016 IPR023214 HAD-like domain SMA_RS02260 c492867fc42f70641d906a616fa7ae15 270 Gene3D G3DSA:3.40.50.1000 1 74 1.3E-58 T 25-04-2016 IPR023214 HAD-like domain SMA_RS02260 c492867fc42f70641d906a616fa7ae15 270 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 4 264 8.5E-61 T 25-04-2016 IPR000150 Cof protein GO:0016787 SMA_RS02260 c492867fc42f70641d906a616fa7ae15 270 ProSitePatterns PS01228 Hypothetical cof family signature 1. 4 15 - T 25-04-2016 IPR000150 Cof protein GO:0016787 SMA_RS02260 c492867fc42f70641d906a616fa7ae15 270 Gene3D G3DSA:3.30.1240.10 87 183 6.2E-9 T 25-04-2016 SMA_RS02260 c492867fc42f70641d906a616fa7ae15 270 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 4 237 1.5E-31 T 25-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 SMA_RS02260 c492867fc42f70641d906a616fa7ae15 270 Pfam PF08282 haloacid dehalogenase-like hydrolase 5 264 4.3E-64 T 25-04-2016 IPR023214 HAD-like domain SMA_RS02260 c492867fc42f70641d906a616fa7ae15 270 SUPERFAMILY SSF56784 1 269 8.27E-69 T 25-04-2016 IPR023214 HAD-like domain SMA_RS02260 c492867fc42f70641d906a616fa7ae15 270 PANTHER PTHR10000 1 270 2.9E-75 T 25-04-2016 SMA_RS02260 c492867fc42f70641d906a616fa7ae15 270 ProSitePatterns PS01229 Hypothetical cof family signature 2. 218 240 - T 25-04-2016 SMA_RS06685 524d6f92960ba835a3e69fa8a406b3e8 281 PANTHER PTHR30177:SF0 81 225 1.6E-38 T 25-04-2016 SMA_RS06685 524d6f92960ba835a3e69fa8a406b3e8 281 SUPERFAMILY SSF53850 81 235 4.34E-41 T 25-04-2016 SMA_RS06685 524d6f92960ba835a3e69fa8a406b3e8 281 Gene3D G3DSA:3.40.190.100 82 183 3.2E-31 T 25-04-2016 SMA_RS06685 524d6f92960ba835a3e69fa8a406b3e8 281 PANTHER PTHR30177 81 225 1.6E-38 T 25-04-2016 SMA_RS06685 524d6f92960ba835a3e69fa8a406b3e8 281 SUPERFAMILY SSF53850 4 71 3.15E-14 T 25-04-2016 SMA_RS06685 524d6f92960ba835a3e69fa8a406b3e8 281 Gene3D G3DSA:3.40.190.10 235 270 1.1E-5 T 25-04-2016 SMA_RS06685 524d6f92960ba835a3e69fa8a406b3e8 281 Gene3D G3DSA:3.40.190.10 3 70 5.4E-17 T 25-04-2016 SMA_RS06685 524d6f92960ba835a3e69fa8a406b3e8 281 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 4 58 1.1E-8 T 25-04-2016 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 SMA_RS06685 524d6f92960ba835a3e69fa8a406b3e8 281 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 77 220 6.4E-32 T 25-04-2016 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 SMA_RS07195 e593e0f896e04704b303621e3a55841a 194 SUPERFAMILY SSF54211 87 179 2.78E-35 T 25-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SMA_RS07195 e593e0f896e04704b303621e3a55841a 194 PANTHER PTHR23133 1 194 2.3E-100 T 25-04-2016 SMA_RS07195 e593e0f896e04704b303621e3a55841a 194 SUPERFAMILY SSF54211 2 85 1.39E-32 T 25-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SMA_RS07195 e593e0f896e04704b303621e3a55841a 194 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 156 168 - T 25-04-2016 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 SMA_RS07195 e593e0f896e04704b303621e3a55841a 194 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 31 174 5.9E-65 T 25-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 SMA_RS07195 e593e0f896e04704b303621e3a55841a 194 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 61 74 - T 25-04-2016 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 SMA_RS07195 e593e0f896e04704b303621e3a55841a 194 PANTHER PTHR23133:SF2 1 194 2.3E-100 T 25-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 SMA_RS07195 e593e0f896e04704b303621e3a55841a 194 Gene3D G3DSA:3.30.230.40 90 194 2.8E-31 T 25-04-2016 SMA_RS07195 e593e0f896e04704b303621e3a55841a 194 Gene3D G3DSA:3.30.230.40 1 89 5.4E-38 T 25-04-2016 SMA_RS07195 e593e0f896e04704b303621e3a55841a 194 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 2 194 41.683 T 25-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 SMA_RS00955 cd812c5f74f4d25b778bc675c08e4f65 179 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 6 179 20.761 T 25-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 SMA_RS00955 cd812c5f74f4d25b778bc675c08e4f65 179 SUPERFAMILY SSF82679 7 118 1.83E-35 T 25-04-2016 IPR006645 NusG, N-terminal GO:0006355 SMA_RS00955 cd812c5f74f4d25b778bc675c08e4f65 179 SMART SM00739 127 154 6.3E-7 T 25-04-2016 IPR005824 KOW SMA_RS00955 cd812c5f74f4d25b778bc675c08e4f65 179 Pfam PF00467 KOW motif 130 158 5.5E-8 T 25-04-2016 IPR005824 KOW SMA_RS00955 cd812c5f74f4d25b778bc675c08e4f65 179 SUPERFAMILY SSF50104 117 177 2.93E-13 T 25-04-2016 IPR008991 Translation protein SH3-like domain SMA_RS00955 cd812c5f74f4d25b778bc675c08e4f65 179 PRINTS PR00338 Transcription termination factor NUSG signature 61 73 1.4E-7 T 25-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 SMA_RS00955 cd812c5f74f4d25b778bc675c08e4f65 179 PRINTS PR00338 Transcription termination factor NUSG signature 155 171 1.4E-7 T 25-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 SMA_RS00955 cd812c5f74f4d25b778bc675c08e4f65 179 Pfam PF02357 Transcription termination factor nusG 7 114 1.9E-26 T 25-04-2016 IPR006645 NusG, N-terminal GO:0006355 SMA_RS00955 cd812c5f74f4d25b778bc675c08e4f65 179 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 9 177 1.2E-46 T 25-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 SMA_RS00955 cd812c5f74f4d25b778bc675c08e4f65 179 PANTHER PTHR30265 2 179 4.9E-60 T 25-04-2016 SMA_RS00955 cd812c5f74f4d25b778bc675c08e4f65 179 Gene3D G3DSA:2.30.30.30 123 178 3.5E-17 T 25-04-2016 IPR014722 Ribosomal protein L2 domain 2 SMA_RS00955 cd812c5f74f4d25b778bc675c08e4f65 179 Gene3D G3DSA:3.30.70.940 7 119 1.8E-42 T 25-04-2016 IPR006645 NusG, N-terminal GO:0006355 SMA_RS00955 cd812c5f74f4d25b778bc675c08e4f65 179 SMART SM00738 6 117 4.0E-48 T 25-04-2016 IPR006645 NusG, N-terminal GO:0006355 SMA_RS00955 cd812c5f74f4d25b778bc675c08e4f65 179 ProSitePatterns PS01108 Ribosomal protein L24 signature. 131 148 - T 25-04-2016 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS06930 8a584ba331dcc638816de3c1a6641c91 1634 Pfam PF08363 Glucan-binding protein C 435 631 8.6E-58 T 25-04-2016 IPR013574 Glucan-binding protein C/Surface antigen I/II, V-domain SMA_RS06930 8a584ba331dcc638816de3c1a6641c91 1634 SUPERFAMILY SSF74914 345 650 1.57E-80 T 25-04-2016 IPR013574 Glucan-binding protein C/Surface antigen I/II, V-domain SMA_RS06930 8a584ba331dcc638816de3c1a6641c91 1634 TIGRFAM TIGR01167 LPXTG_anchor: LPXTG cell wall anchor domain 1600 1630 4.6E-4 T 25-04-2016 IPR019931 LPXTG cell wall anchor domain SMA_RS06930 8a584ba331dcc638816de3c1a6641c91 1634 Pfam PF16364 Cell surface antigen C-terminus 1369 1555 1.4E-28 T 25-04-2016 IPR032300 Cell surface antigen, C-terminal SMA_RS06930 8a584ba331dcc638816de3c1a6641c91 1634 TIGRFAM TIGR03726 strep_RK_lipo: putative cross-wall-targeting lipoprotein signal 19 54 9.5E-17 T 25-04-2016 IPR021197 Cross-wall-targeting lipoprotein motif SMA_RS06930 8a584ba331dcc638816de3c1a6641c91 1634 TIGRFAM TIGR04228 isopep_sspB_C2: adhesin isopeptide-forming adherence domain 1061 1234 3.0E-65 T 25-04-2016 IPR026345 Adhesin isopeptide-forming adherence domain SMA_RS06930 8a584ba331dcc638816de3c1a6641c91 1634 TIGRFAM TIGR04228 isopep_sspB_C2: adhesin isopeptide-forming adherence domain 1238 1411 3.5E-62 T 25-04-2016 IPR026345 Adhesin isopeptide-forming adherence domain SMA_RS06930 8a584ba331dcc638816de3c1a6641c91 1634 TIGRFAM TIGR04228 isopep_sspB_C2: adhesin isopeptide-forming adherence domain 884 1056 1.1E-58 T 25-04-2016 IPR026345 Adhesin isopeptide-forming adherence domain SMA_RS00060 5fe9affdf34e4fa4c3632ac506753fd8 421 SUPERFAMILY SSF56037 323 382 5.49E-6 T 25-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 SMA_RS00060 5fe9affdf34e4fa4c3632ac506753fd8 421 TIGRFAM TIGR02433 lysidine_TilS_C: tRNA(Ile)-lysidine synthetase, C-terminal domain 343 385 1.0E-9 T 25-04-2016 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 SMA_RS00060 5fe9affdf34e4fa4c3632ac506753fd8 421 Gene3D G3DSA:3.40.50.620 1 167 5.0E-15 T 25-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SMA_RS00060 5fe9affdf34e4fa4c3632ac506753fd8 421 PANTHER PTHR11807 1 392 7.2E-68 T 25-04-2016 SMA_RS00060 5fe9affdf34e4fa4c3632ac506753fd8 421 SUPERFAMILY SSF52402 7 218 4.41E-53 T 25-04-2016 SMA_RS00060 5fe9affdf34e4fa4c3632ac506753fd8 421 SMART SM00977 343 400 3.9E-4 T 25-04-2016 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 SMA_RS00060 5fe9affdf34e4fa4c3632ac506753fd8 421 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 6 321 22.419 T 25-04-2016 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 SMA_RS00060 5fe9affdf34e4fa4c3632ac506753fd8 421 PANTHER PTHR11807:SF2 1 392 7.2E-68 T 25-04-2016 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 SMA_RS00060 5fe9affdf34e4fa4c3632ac506753fd8 421 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 20 193 5.4E-52 T 25-04-2016 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 SMA_RS00060 5fe9affdf34e4fa4c3632ac506753fd8 421 Pfam PF01171 PP-loop family 20 190 3.9E-54 T 25-04-2016 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal SMA_RS04855 427b417904d05715613048b086e70689 359 Pfam PF00472 RF-1 domain 213 322 1.1E-37 T 25-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 SMA_RS04855 427b417904d05715613048b086e70689 359 SUPERFAMILY SSF75620 10 354 3.66E-129 T 25-04-2016 SMA_RS04855 427b417904d05715613048b086e70689 359 PANTHER PTHR11075 2 357 8.2E-171 T 25-04-2016 SMA_RS04855 427b417904d05715613048b086e70689 359 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 3 358 4.2E-160 T 25-04-2016 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 SMA_RS04855 427b417904d05715613048b086e70689 359 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 229 245 - T 25-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 SMA_RS04855 427b417904d05715613048b086e70689 359 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 3 358 39.512 T 25-04-2016 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 SMA_RS04855 427b417904d05715613048b086e70689 359 Gene3D G3DSA:3.30.160.20 212 285 2.2E-29 T 25-04-2016 IPR014720 Double-stranded RNA-binding domain SMA_RS04855 427b417904d05715613048b086e70689 359 SMART SM00937 65 180 6.5E-62 T 25-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 SMA_RS04855 427b417904d05715613048b086e70689 359 Pfam PF03462 PCRF domain 11 205 1.6E-72 T 25-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 SMA_RS04855 427b417904d05715613048b086e70689 359 PANTHER PTHR11075:SF9 2 357 8.2E-171 T 25-04-2016 SMA_RS04855 427b417904d05715613048b086e70689 359 Gene3D G3DSA:1.20.58.410 4 95 1.3E-22 T 25-04-2016 SMA_RS07100 044bed4efb0e619dade474999fba9421 171 Pfam PF01527 Transposase 53 139 5.3E-8 T 25-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 SMA_RS07100 044bed4efb0e619dade474999fba9421 171 SUPERFAMILY SSF46689 54 157 1.06E-16 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMA_RS07100 044bed4efb0e619dade474999fba9421 171 PANTHER PTHR33795 1 170 1.0E-48 T 25-04-2016 SMA_RS07100 044bed4efb0e619dade474999fba9421 171 PANTHER PTHR33795:SF1 1 170 1.0E-48 T 25-04-2016 SMA_RS07100 044bed4efb0e619dade474999fba9421 171 Gene3D G3DSA:1.10.10.60 59 151 4.5E-14 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMA_RS05555 044bed4efb0e619dade474999fba9421 171 Pfam PF01527 Transposase 53 139 5.3E-8 T 25-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 SMA_RS05555 044bed4efb0e619dade474999fba9421 171 SUPERFAMILY SSF46689 54 157 1.06E-16 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMA_RS05555 044bed4efb0e619dade474999fba9421 171 PANTHER PTHR33795 1 170 1.0E-48 T 25-04-2016 SMA_RS05555 044bed4efb0e619dade474999fba9421 171 PANTHER PTHR33795:SF1 1 170 1.0E-48 T 25-04-2016 SMA_RS05555 044bed4efb0e619dade474999fba9421 171 Gene3D G3DSA:1.10.10.60 59 151 4.5E-14 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMA_RS06520 044bed4efb0e619dade474999fba9421 171 Pfam PF01527 Transposase 53 139 5.3E-8 T 25-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 SMA_RS06520 044bed4efb0e619dade474999fba9421 171 SUPERFAMILY SSF46689 54 157 1.06E-16 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMA_RS06520 044bed4efb0e619dade474999fba9421 171 PANTHER PTHR33795 1 170 1.0E-48 T 25-04-2016 SMA_RS06520 044bed4efb0e619dade474999fba9421 171 PANTHER PTHR33795:SF1 1 170 1.0E-48 T 25-04-2016 SMA_RS06520 044bed4efb0e619dade474999fba9421 171 Gene3D G3DSA:1.10.10.60 59 151 4.5E-14 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMA_RS06640 044bed4efb0e619dade474999fba9421 171 Pfam PF01527 Transposase 53 139 5.3E-8 T 25-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 SMA_RS06640 044bed4efb0e619dade474999fba9421 171 SUPERFAMILY SSF46689 54 157 1.06E-16 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMA_RS06640 044bed4efb0e619dade474999fba9421 171 PANTHER PTHR33795 1 170 1.0E-48 T 25-04-2016 SMA_RS06640 044bed4efb0e619dade474999fba9421 171 PANTHER PTHR33795:SF1 1 170 1.0E-48 T 25-04-2016 SMA_RS06640 044bed4efb0e619dade474999fba9421 171 Gene3D G3DSA:1.10.10.60 59 151 4.5E-14 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMA_RS03665 044bed4efb0e619dade474999fba9421 171 Pfam PF01527 Transposase 53 139 5.3E-8 T 25-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 SMA_RS03665 044bed4efb0e619dade474999fba9421 171 SUPERFAMILY SSF46689 54 157 1.06E-16 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMA_RS03665 044bed4efb0e619dade474999fba9421 171 PANTHER PTHR33795 1 170 1.0E-48 T 25-04-2016 SMA_RS03665 044bed4efb0e619dade474999fba9421 171 PANTHER PTHR33795:SF1 1 170 1.0E-48 T 25-04-2016 SMA_RS03665 044bed4efb0e619dade474999fba9421 171 Gene3D G3DSA:1.10.10.60 59 151 4.5E-14 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMA_RS08625 98040c35dd83078ee75b1f10e64da3d9 197 TIGRFAM TIGR00488 TIGR00488: putative HD superfamily hydrolase 22 189 4.7E-47 T 25-04-2016 IPR005249 Conserved hypothetical protein CHP00488 SMA_RS08625 98040c35dd83078ee75b1f10e64da3d9 197 PANTHER PTHR35795 4 195 2.8E-63 T 25-04-2016 SMA_RS08625 98040c35dd83078ee75b1f10e64da3d9 197 Gene3D G3DSA:1.10.3210.10 8 194 8.2E-66 T 25-04-2016 IPR006674 HD domain SMA_RS08625 98040c35dd83078ee75b1f10e64da3d9 197 SUPERFAMILY SSF109604 13 193 2.06E-33 T 25-04-2016 SMA_RS08625 98040c35dd83078ee75b1f10e64da3d9 197 SMART SM00471 23 150 6.4E-9 T 25-04-2016 IPR003607 HD/PDEase domain SMA_RS08625 98040c35dd83078ee75b1f10e64da3d9 197 Pfam PF01966 HD domain 27 139 3.4E-13 T 25-04-2016 IPR006674 HD domain SMA_RS08595 67a83d71eddb0b53c14d2ea31dc6e11f 240 SUPERFAMILY SSF46955 3 102 1.03E-26 T 25-04-2016 IPR009061 Putative DNA-binding domain SMA_RS08595 67a83d71eddb0b53c14d2ea31dc6e11f 240 SMART SM00422 3 71 4.5E-19 T 25-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SMA_RS08595 67a83d71eddb0b53c14d2ea31dc6e11f 240 PANTHER PTHR30204 3 239 7.1E-41 T 25-04-2016 SMA_RS08595 67a83d71eddb0b53c14d2ea31dc6e11f 240 PANTHER PTHR30204:SF27 3 239 7.1E-41 T 25-04-2016 SMA_RS08595 67a83d71eddb0b53c14d2ea31dc6e11f 240 SUPERFAMILY SSF89082 149 239 3.4E-22 T 25-04-2016 IPR012925 TipAS antibiotic-recognition domain SMA_RS08595 67a83d71eddb0b53c14d2ea31dc6e11f 240 Pfam PF13411 MerR HTH family regulatory protein 3 69 1.0E-13 T 25-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SMA_RS08595 67a83d71eddb0b53c14d2ea31dc6e11f 240 Gene3D G3DSA:1.10.1660.10 58 103 1.4E-4 T 25-04-2016 SMA_RS08595 67a83d71eddb0b53c14d2ea31dc6e11f 240 Gene3D G3DSA:1.10.490.50 152 239 2.9E-26 T 25-04-2016 IPR012925 TipAS antibiotic-recognition domain SMA_RS08595 67a83d71eddb0b53c14d2ea31dc6e11f 240 Gene3D G3DSA:1.10.1660.10 3 57 1.8E-22 T 25-04-2016 SMA_RS08595 67a83d71eddb0b53c14d2ea31dc6e11f 240 Pfam PF07739 TipAS antibiotic-recognition domain 125 235 1.3E-24 T 25-04-2016 IPR012925 TipAS antibiotic-recognition domain SMA_RS01340 00c125045f427734732b199deabba073 264 Pfam PF01148 Cytidylyltransferase family 2 261 3.2E-75 T 25-04-2016 SMA_RS01340 00c125045f427734732b199deabba073 264 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 223 249 - T 25-04-2016 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00557 SMA_RS01340 00c125045f427734732b199deabba073 264 PANTHER PTHR13773 1 261 7.4E-68 T 25-04-2016 SMA_RS08410 68517cbd805a86953a40e955e0a7a46e 116 PANTHER PTHR36455 3 113 4.5E-59 T 25-04-2016 SMA_RS08410 68517cbd805a86953a40e955e0a7a46e 116 PANTHER PTHR36455:SF1 3 113 4.5E-59 T 25-04-2016 SMA_RS08410 68517cbd805a86953a40e955e0a7a46e 116 Pfam PF05717 IS66 Orf2 like protein 10 103 1.8E-37 T 25-04-2016 IPR008878 Transposase IS66, Orf2 SMA_RS00695 f304ae5c3853c9e5f5d7fc17b24e64a9 325 Pfam PF00482 Type II secretion system (T2SS), protein F 10 128 2.6E-6 T 25-04-2016 IPR018076 Type II secretion system F domain SMA_RS00695 f304ae5c3853c9e5f5d7fc17b24e64a9 325 Pfam PF00482 Type II secretion system (T2SS), protein F 196 316 4.3E-16 T 25-04-2016 IPR018076 Type II secretion system F domain SMA_RS00695 f304ae5c3853c9e5f5d7fc17b24e64a9 325 PANTHER PTHR30012 1 325 2.3E-48 T 25-04-2016 SMA_RS08510 b2ecf5f182232019783c759d3462c136 558 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SMA_RS08510 b2ecf5f182232019783c759d3462c136 558 ProSitePatterns PS00211 ABC transporters family signature. 428 442 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SMA_RS08510 b2ecf5f182232019783c759d3462c136 558 Pfam PF00005 ABC transporter 311 456 1.9E-31 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMA_RS08510 b2ecf5f182232019783c759d3462c136 558 Pfam PF00005 ABC transporter 22 172 8.2E-23 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMA_RS08510 b2ecf5f182232019783c759d3462c136 558 PANTHER PTHR24220:SF588 286 416 2.8E-187 T 25-04-2016 SMA_RS08510 b2ecf5f182232019783c759d3462c136 558 PANTHER PTHR24220:SF588 6 250 2.8E-187 T 25-04-2016 SMA_RS08510 b2ecf5f182232019783c759d3462c136 558 Pfam PF12558 ATP-binding cassette cobalt transporter 236 302 2.4E-15 T 25-04-2016 IPR022216 ABC cobalt transporter GO:0016820 KEGG: 00920+3.6.3.- SMA_RS08510 b2ecf5f182232019783c759d3462c136 558 SUPERFAMILY SSF52540 286 520 3.03E-60 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS08510 b2ecf5f182232019783c759d3462c136 558 SMART SM00382 320 504 2.4E-15 T 25-04-2016 IPR003593 AAA+ ATPase domain SMA_RS08510 b2ecf5f182232019783c759d3462c136 558 SMART SM00382 31 223 4.6E-10 T 25-04-2016 IPR003593 AAA+ ATPase domain SMA_RS08510 b2ecf5f182232019783c759d3462c136 558 Gene3D G3DSA:3.40.50.300 2 236 2.0E-58 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS08510 b2ecf5f182232019783c759d3462c136 558 SUPERFAMILY SSF52540 2 236 8.87E-51 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS08510 b2ecf5f182232019783c759d3462c136 558 Gene3D G3DSA:3.40.50.300 287 526 1.1E-65 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS08510 b2ecf5f182232019783c759d3462c136 558 PANTHER PTHR24220 286 416 2.8E-187 T 25-04-2016 SMA_RS08510 b2ecf5f182232019783c759d3462c136 558 PANTHER PTHR24220 6 250 2.8E-187 T 25-04-2016 SMA_RS08985 40a18388bd699cb5d553939647179d5f 825 Pfam PF13604 AAA domain 331 525 4.1E-44 T 25-04-2016 SMA_RS08985 40a18388bd699cb5d553939647179d5f 825 SUPERFAMILY SSF52540 552 730 2.12E-55 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS08985 40a18388bd699cb5d553939647179d5f 825 SUPERFAMILY SSF52540 447 513 2.12E-55 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS08985 40a18388bd699cb5d553939647179d5f 825 TIGRFAM TIGR01448 recD_rel: helicase, RecD/TraA family 5 731 1.7E-278 T 25-04-2016 IPR006345 DNA helicase, RecD-like GO:0003677|GO:0032508|GO:0043141 SMA_RS08985 40a18388bd699cb5d553939647179d5f 825 Gene3D G3DSA:3.40.50.300 290 517 4.0E-47 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS08985 40a18388bd699cb5d553939647179d5f 825 Pfam PF14490 Helix-hairpin-helix containing domain 147 236 2.0E-28 T 25-04-2016 IPR029493 RecD helicase-like helix-hairpin-helix domain SMA_RS08985 40a18388bd699cb5d553939647179d5f 825 PANTHER PTHR10887:SF284 659 820 2.9E-102 T 25-04-2016 SMA_RS08985 40a18388bd699cb5d553939647179d5f 825 PANTHER PTHR10887:SF284 159 194 2.9E-102 T 25-04-2016 SMA_RS08985 40a18388bd699cb5d553939647179d5f 825 PANTHER PTHR10887:SF284 271 587 2.9E-102 T 25-04-2016 SMA_RS08985 40a18388bd699cb5d553939647179d5f 825 Pfam PF13538 UvrD-like helicase C-terminal domain 659 705 3.2E-16 T 25-04-2016 IPR027785 UvrD-like helicase C-terminal domain SMA_RS08985 40a18388bd699cb5d553939647179d5f 825 Gene3D G3DSA:3.40.50.300 660 755 1.3E-15 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS08985 40a18388bd699cb5d553939647179d5f 825 SUPERFAMILY SSF52540 185 485 2.68E-41 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS08985 40a18388bd699cb5d553939647179d5f 825 PANTHER PTHR10887 659 820 2.9E-102 T 25-04-2016 SMA_RS08985 40a18388bd699cb5d553939647179d5f 825 PANTHER PTHR10887 159 194 2.9E-102 T 25-04-2016 SMA_RS08985 40a18388bd699cb5d553939647179d5f 825 PANTHER PTHR10887 271 587 2.9E-102 T 25-04-2016 SMA_RS08985 40a18388bd699cb5d553939647179d5f 825 Hamap MF_01488 ATP-dependent RecD-like DNA helicase [recD2]. 2 734 27.966 T 25-04-2016 IPR006345 DNA helicase, RecD-like GO:0003677|GO:0032508|GO:0043141 SMA_RS08985 40a18388bd699cb5d553939647179d5f 825 SMART SM00382 344 494 2.2E-6 T 25-04-2016 IPR003593 AAA+ ATPase domain SMA_RS09340 1adf7fa46f5380ea07176f8f446dba66 290 Gene3D G3DSA:3.40.50.150 3 211 3.1E-74 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMA_RS09340 1adf7fa46f5380ea07176f8f446dba66 290 PANTHER PTHR11727 1 285 1.8E-93 T 25-04-2016 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm SMA_RS09340 1adf7fa46f5380ea07176f8f446dba66 290 Pfam PF00398 Ribosomal RNA adenine dimethylase 18 277 1.3E-66 T 25-04-2016 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm SMA_RS09340 1adf7fa46f5380ea07176f8f446dba66 290 SUPERFAMILY SSF53335 15 287 2.2E-77 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMA_RS09340 1adf7fa46f5380ea07176f8f446dba66 290 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 18 284 1.2E-83 T 25-04-2016 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 SMA_RS09340 1adf7fa46f5380ea07176f8f446dba66 290 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 50 77 - T 25-04-2016 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 SMA_RS09340 1adf7fa46f5380ea07176f8f446dba66 290 Gene3D G3DSA:1.10.8.100 214 287 6.2E-24 T 25-04-2016 IPR023165 rRNA adenine dimethylase-like SMA_RS09340 1adf7fa46f5380ea07176f8f446dba66 290 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 18 286 57.032 T 25-04-2016 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 SMA_RS09340 1adf7fa46f5380ea07176f8f446dba66 290 SMART SM00650 34 210 1.4E-84 T 25-04-2016 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 SMA_RS00845 efb99143ec52acd497aceb2259387797 227 SUPERFAMILY SSF46894 140 216 1.12E-18 T 25-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SMA_RS00845 efb99143ec52acd497aceb2259387797 227 Pfam PF00196 Bacterial regulatory proteins, luxR family 158 211 6.5E-15 T 25-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SMA_RS00845 efb99143ec52acd497aceb2259387797 227 SMART SM00421 154 211 4.1E-19 T 25-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SMA_RS00845 efb99143ec52acd497aceb2259387797 227 PANTHER PTHR26402:SF151 2 218 8.4E-75 T 25-04-2016 SMA_RS00845 efb99143ec52acd497aceb2259387797 227 PANTHER PTHR26402 2 218 8.4E-75 T 25-04-2016 SMA_RS00845 efb99143ec52acd497aceb2259387797 227 Gene3D G3DSA:1.10.10.10 123 216 7.6E-23 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMA_RS00845 efb99143ec52acd497aceb2259387797 227 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 187 199 3.3E-10 T 25-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SMA_RS00845 efb99143ec52acd497aceb2259387797 227 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 171 187 3.3E-10 T 25-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SMA_RS00845 efb99143ec52acd497aceb2259387797 227 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 157 171 3.3E-10 T 25-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SMA_RS00845 efb99143ec52acd497aceb2259387797 227 SMART SM00448 2 115 1.2E-32 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMA_RS00845 efb99143ec52acd497aceb2259387797 227 Pfam PF00072 Response regulator receiver domain 4 115 1.9E-28 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMA_RS00845 efb99143ec52acd497aceb2259387797 227 ProSitePatterns PS00622 LuxR-type HTH domain signature. 171 198 - T 25-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SMA_RS00845 efb99143ec52acd497aceb2259387797 227 Gene3D G3DSA:3.40.50.2300 1 122 5.2E-38 T 25-04-2016 SMA_RS00845 efb99143ec52acd497aceb2259387797 227 SUPERFAMILY SSF52172 1 132 2.13E-35 T 25-04-2016 IPR011006 CheY-like superfamily SMA_RS08470 f9ba3d57ad4458008ec947700863b446 230 Gene3D G3DSA:1.10.10.10 153 229 1.1E-30 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMA_RS08470 f9ba3d57ad4458008ec947700863b446 230 PANTHER PTHR26402:SF578 3 229 2.3E-88 T 25-04-2016 SMA_RS08470 f9ba3d57ad4458008ec947700863b446 230 SUPERFAMILY SSF46894 138 228 2.18E-27 T 25-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SMA_RS08470 f9ba3d57ad4458008ec947700863b446 230 SMART SM00862 152 227 3.3E-24 T 25-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SMA_RS08470 f9ba3d57ad4458008ec947700863b446 230 Pfam PF00486 Transcriptional regulatory protein, C terminal 153 226 3.6E-25 T 25-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SMA_RS08470 f9ba3d57ad4458008ec947700863b446 230 PANTHER PTHR26402 3 229 2.3E-88 T 25-04-2016 SMA_RS08470 f9ba3d57ad4458008ec947700863b446 230 Gene3D G3DSA:3.40.50.2300 2 152 9.5E-39 T 25-04-2016 SMA_RS08470 f9ba3d57ad4458008ec947700863b446 230 Pfam PF00072 Response regulator receiver domain 5 114 8.4E-26 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMA_RS08470 f9ba3d57ad4458008ec947700863b446 230 SUPERFAMILY SSF52172 2 125 3.42E-38 T 25-04-2016 IPR011006 CheY-like superfamily SMA_RS08470 f9ba3d57ad4458008ec947700863b446 230 SMART SM00448 3 113 1.4E-39 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMA_RS07885 0ef66bc3ea92c8a1e51ad4f493567553 801 SMART SM00843 732 797 3.1E-37 T 25-04-2016 IPR018541 FtsK gamma domain SMA_RS07885 0ef66bc3ea92c8a1e51ad4f493567553 801 PANTHER PTHR22683:SF41 12 794 1.8E-237 T 25-04-2016 SMA_RS07885 0ef66bc3ea92c8a1e51ad4f493567553 801 SUPERFAMILY SSF52540 409 703 3.72E-43 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS07885 0ef66bc3ea92c8a1e51ad4f493567553 801 PANTHER PTHR22683 12 794 1.8E-237 T 25-04-2016 SMA_RS07885 0ef66bc3ea92c8a1e51ad4f493567553 801 SUPERFAMILY SSF46785 733 798 1.41E-20 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMA_RS07885 0ef66bc3ea92c8a1e51ad4f493567553 801 Pfam PF09397 Ftsk gamma domain 734 795 2.9E-28 T 25-04-2016 IPR018541 FtsK gamma domain SMA_RS07885 0ef66bc3ea92c8a1e51ad4f493567553 801 Pfam PF01580 FtsK/SpoIIIE family 442 631 8.5E-59 T 25-04-2016 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 SMA_RS07885 0ef66bc3ea92c8a1e51ad4f493567553 801 SMART SM00382 470 652 4.6E-5 T 25-04-2016 IPR003593 AAA+ ATPase domain SMA_RS07885 0ef66bc3ea92c8a1e51ad4f493567553 801 Gene3D G3DSA:3.40.50.300 410 697 7.4E-81 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS09605 acf8e0f1c5e669bbcb019d0c2e13fc41 219 Gene3D G3DSA:3.30.420.10 51 212 6.4E-34 T 25-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMA_RS09605 acf8e0f1c5e669bbcb019d0c2e13fc41 219 SUPERFAMILY SSF53098 51 213 1.19E-36 T 25-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMA_RS09605 acf8e0f1c5e669bbcb019d0c2e13fc41 219 Pfam PF00665 Integrase core domain 57 173 1.7E-27 T 25-04-2016 IPR001584 Integrase, catalytic core GO:0015074 SMA_RS09605 acf8e0f1c5e669bbcb019d0c2e13fc41 219 PANTHER PTHR32552 1 219 4.8E-36 T 25-04-2016 SMA_RS09490 acf8e0f1c5e669bbcb019d0c2e13fc41 219 Gene3D G3DSA:3.30.420.10 51 212 6.4E-34 T 25-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMA_RS09490 acf8e0f1c5e669bbcb019d0c2e13fc41 219 SUPERFAMILY SSF53098 51 213 1.19E-36 T 25-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMA_RS09490 acf8e0f1c5e669bbcb019d0c2e13fc41 219 Pfam PF00665 Integrase core domain 57 173 1.7E-27 T 25-04-2016 IPR001584 Integrase, catalytic core GO:0015074 SMA_RS09490 acf8e0f1c5e669bbcb019d0c2e13fc41 219 PANTHER PTHR32552 1 219 4.8E-36 T 25-04-2016 SMA_RS05740 743a723dafaf8affa26523854c1f3345 253 PANTHER PTHR30363:SF10 1 237 7.9E-101 T 25-04-2016 SMA_RS05740 743a723dafaf8affa26523854c1f3345 253 PANTHER PTHR30363 1 237 7.9E-101 T 25-04-2016 SMA_RS05740 743a723dafaf8affa26523854c1f3345 253 SMART SM00420 6 58 1.0E-22 T 25-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 SMA_RS05740 743a723dafaf8affa26523854c1f3345 253 SMART SM01134 75 234 9.7E-62 T 25-04-2016 SMA_RS05740 743a723dafaf8affa26523854c1f3345 253 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 25-04-2016 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 SMA_RS05740 743a723dafaf8affa26523854c1f3345 253 Pfam PF00455 DeoR C terminal sensor domain 77 233 2.3E-47 T 25-04-2016 IPR014036 DeoR C-terminal sensor domain SMA_RS05740 743a723dafaf8affa26523854c1f3345 253 Gene3D G3DSA:3.40.50.1360 80 214 3.7E-10 T 25-04-2016 SMA_RS05740 743a723dafaf8affa26523854c1f3345 253 Pfam PF08220 DeoR-like helix-turn-helix domain 6 58 1.1E-19 T 25-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 SMA_RS05740 743a723dafaf8affa26523854c1f3345 253 SUPERFAMILY SSF46785 4 61 9.77E-15 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMA_RS05740 743a723dafaf8affa26523854c1f3345 253 SUPERFAMILY SSF100950 77 235 7.43E-30 T 25-04-2016 SMA_RS05740 743a723dafaf8affa26523854c1f3345 253 Gene3D G3DSA:1.10.10.10 4 79 2.8E-11 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMA_RS05740 743a723dafaf8affa26523854c1f3345 253 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 8.3E-10 T 25-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 SMA_RS05740 743a723dafaf8affa26523854c1f3345 253 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 8.3E-10 T 25-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 SMA_RS06505 2503ccd9aff718f2691bcb9460d52665 602 SMART SM00493 271 342 3.4E-17 T 25-04-2016 IPR006171 Toprim domain SMA_RS06505 2503ccd9aff718f2691bcb9460d52665 602 TIGRFAM TIGR01391 dnaG: DNA primase 12 425 1.0E-140 T 25-04-2016 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 SMA_RS06505 2503ccd9aff718f2691bcb9460d52665 602 Pfam PF08275 DNA primase catalytic core, N-terminal domain 132 264 2.9E-35 T 25-04-2016 IPR013264 DNA primase, catalytic core, N-terminal SMA_RS06505 2503ccd9aff718f2691bcb9460d52665 602 SUPERFAMILY SSF56731 122 434 1.7E-91 T 25-04-2016 SMA_RS06505 2503ccd9aff718f2691bcb9460d52665 602 SMART SM00400 43 97 4.1E-32 T 25-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 SMA_RS06505 2503ccd9aff718f2691bcb9460d52665 602 PANTHER PTHR30313 10 602 3.4E-128 T 25-04-2016 SMA_RS06505 2503ccd9aff718f2691bcb9460d52665 602 Gene3D G3DSA:3.90.980.10 122 252 1.7E-36 T 25-04-2016 IPR013264 DNA primase, catalytic core, N-terminal SMA_RS06505 2503ccd9aff718f2691bcb9460d52665 602 Gene3D G3DSA:3.90.580.10 12 106 2.8E-37 T 25-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 SMA_RS06505 2503ccd9aff718f2691bcb9460d52665 602 SUPERFAMILY SSF57783 11 105 1.12E-33 T 25-04-2016 SMA_RS06505 2503ccd9aff718f2691bcb9460d52665 602 Gene3D G3DSA:3.40.1360.10 253 372 3.9E-43 T 25-04-2016 SMA_RS06505 2503ccd9aff718f2691bcb9460d52665 602 Hamap MF_00974 DNA primase [dnaG]. 11 576 26.77 T 25-04-2016 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 SMA_RS06505 2503ccd9aff718f2691bcb9460d52665 602 PIRSF PIRSF002811 10 602 6.0E-175 T 25-04-2016 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 SMA_RS06505 2503ccd9aff718f2691bcb9460d52665 602 Pfam PF13155 Toprim-like 274 357 6.2E-20 T 25-04-2016 SMA_RS06505 2503ccd9aff718f2691bcb9460d52665 602 Pfam PF01807 CHC2 zinc finger 13 107 1.5E-36 T 25-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 SMA_RS08280 7738d521ca1a2d6e6f73398df87169ed 467 SUPERFAMILY SSF116726 136 213 1.83E-13 T 25-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SMA_RS08280 7738d521ca1a2d6e6f73398df87169ed 467 Gene3D G3DSA:3.30.70.1450 151 219 4.3E-9 T 25-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SMA_RS08280 7738d521ca1a2d6e6f73398df87169ed 467 Gene3D G3DSA:3.30.70.1450 398 465 1.0E-10 T 25-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SMA_RS08280 7738d521ca1a2d6e6f73398df87169ed 467 Gene3D G3DSA:3.40.50.720 227 358 4.1E-28 T 25-04-2016 IPR016040 NAD(P)-binding domain SMA_RS08280 7738d521ca1a2d6e6f73398df87169ed 467 Gene3D G3DSA:3.40.50.720 1 149 3.6E-39 T 25-04-2016 IPR016040 NAD(P)-binding domain SMA_RS08280 7738d521ca1a2d6e6f73398df87169ed 467 Pfam PF02080 TrkA-C domain 152 216 7.1E-13 T 25-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SMA_RS08280 7738d521ca1a2d6e6f73398df87169ed 467 Pfam PF02080 TrkA-C domain 400 465 1.0E-11 T 25-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SMA_RS08280 7738d521ca1a2d6e6f73398df87169ed 467 PRINTS PR00335 TrkA potassium uptake protein signature 60 70 2.0E-11 T 25-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 SMA_RS08280 7738d521ca1a2d6e6f73398df87169ed 467 PRINTS PR00335 TrkA potassium uptake protein signature 2 16 2.0E-11 T 25-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 SMA_RS08280 7738d521ca1a2d6e6f73398df87169ed 467 PRINTS PR00335 TrkA potassium uptake protein signature 49 59 2.0E-11 T 25-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 SMA_RS08280 7738d521ca1a2d6e6f73398df87169ed 467 PRINTS PR00335 TrkA potassium uptake protein signature 73 87 2.0E-11 T 25-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 SMA_RS08280 7738d521ca1a2d6e6f73398df87169ed 467 PRINTS PR00335 TrkA potassium uptake protein signature 19 33 2.0E-11 T 25-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 SMA_RS08280 7738d521ca1a2d6e6f73398df87169ed 467 Pfam PF02254 TrkA-N domain 229 344 3.1E-20 T 25-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 SMA_RS08280 7738d521ca1a2d6e6f73398df87169ed 467 Pfam PF02254 TrkA-N domain 3 122 2.3E-23 T 25-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 SMA_RS08280 7738d521ca1a2d6e6f73398df87169ed 467 SUPERFAMILY SSF51735 227 359 1.46E-23 T 25-04-2016 IPR016040 NAD(P)-binding domain SMA_RS08280 7738d521ca1a2d6e6f73398df87169ed 467 PANTHER PTHR13789:SF225 1 467 2.1E-36 T 25-04-2016 SMA_RS08280 7738d521ca1a2d6e6f73398df87169ed 467 PANTHER PTHR13789 1 467 2.1E-36 T 25-04-2016 SMA_RS08280 7738d521ca1a2d6e6f73398df87169ed 467 SUPERFAMILY SSF116726 389 465 1.96E-13 T 25-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SMA_RS08280 7738d521ca1a2d6e6f73398df87169ed 467 SUPERFAMILY SSF51735 1 149 1.36E-32 T 25-04-2016 IPR016040 NAD(P)-binding domain SMA_RS03520 4812cd01967113e77288f544bb9f7003 303 Hamap MF_01420 Putative sporulation transcription regulator WhiA [whiA]. 3 303 29.244 T 25-04-2016 IPR003802 Sporulation regulator WhiA GO:0043937 SMA_RS03520 4812cd01967113e77288f544bb9f7003 303 Pfam PF10298 WhiA N-terminal LAGLIDADG-like domain 19 99 1.3E-29 T 25-04-2016 IPR018478 Sporulation transcription regulator WhiA, N-terminal domain SMA_RS03520 4812cd01967113e77288f544bb9f7003 303 PANTHER PTHR37307 2 303 1.3E-105 T 25-04-2016 SMA_RS03520 4812cd01967113e77288f544bb9f7003 303 TIGRFAM TIGR00647 DNA_bind_WhiA: DNA-binding protein WhiA 4 301 2.4E-106 T 25-04-2016 SMA_RS03520 4812cd01967113e77288f544bb9f7003 303 Gene3D G3DSA:3.10.28.10 118 197 2.8E-6 T 25-04-2016 IPR027434 Homing endonuclease GO:0004519 SMA_RS03520 4812cd01967113e77288f544bb9f7003 303 Pfam PF02650 WhiA C-terminal HTH domain 217 300 1.5E-29 T 25-04-2016 IPR023054 Sporulation regulator WhiA, C-terminal SMA_RS03520 4812cd01967113e77288f544bb9f7003 303 Pfam PF14527 WhiA LAGLIDADG-like domain 122 214 5.1E-29 T 25-04-2016 SMA_RS03520 4812cd01967113e77288f544bb9f7003 303 SUPERFAMILY SSF55608 117 218 1.7E-13 T 25-04-2016 IPR027434 Homing endonuclease GO:0004519 SMA_RS04630 be053c4a66b50060bc5f18b76accfa59 327 Pfam PF12368 Rhodanase C-terminal 227 293 1.1E-12 T 25-04-2016 IPR022111 Rhodanase, C-terminal SMA_RS04630 be053c4a66b50060bc5f18b76accfa59 327 Pfam PF00581 Rhodanese-like domain 121 215 4.1E-12 T 25-04-2016 IPR001763 Rhodanese-like domain SMA_RS04630 be053c4a66b50060bc5f18b76accfa59 327 PANTHER PTHR22778 2 307 2.9E-106 T 25-04-2016 SMA_RS04630 be053c4a66b50060bc5f18b76accfa59 327 Hamap MF_00469 UPF0176 protein YceA [yceA]. 3 272 39.704 T 25-04-2016 IPR020936 Uncharacterised protein family UPF0176 SMA_RS04630 be053c4a66b50060bc5f18b76accfa59 327 PANTHER PTHR22778:SF21 2 307 2.9E-106 T 25-04-2016 SMA_RS04630 be053c4a66b50060bc5f18b76accfa59 327 SMART SM00450 120 221 3.1E-20 T 25-04-2016 IPR001763 Rhodanese-like domain SMA_RS04630 be053c4a66b50060bc5f18b76accfa59 327 Gene3D G3DSA:3.40.250.10 103 233 1.6E-34 T 25-04-2016 IPR001763 Rhodanese-like domain SMA_RS04630 be053c4a66b50060bc5f18b76accfa59 327 SUPERFAMILY SSF52821 110 253 1.7E-34 T 25-04-2016 IPR001763 Rhodanese-like domain SMA_RS07975 90e5f098c7d765bfa751a91658323624 212 PANTHER PTHR37810:SF1 1 212 2.8E-21 T 25-04-2016 SMA_RS07975 90e5f098c7d765bfa751a91658323624 212 PIRSF PIRSF038959 1 212 1.1E-33 T 25-04-2016 IPR026272 Immunity protein SdpI SMA_RS07975 90e5f098c7d765bfa751a91658323624 212 Pfam PF13630 SdpI/YhfL protein family 135 203 5.0E-21 T 25-04-2016 IPR025962 SdpI/YhfL protein family SMA_RS07975 90e5f098c7d765bfa751a91658323624 212 Pfam PF07853 Protein of unknown function (DUF1648) 13 61 8.5E-19 T 25-04-2016 IPR012867 Domain of unknown function DUF1648 SMA_RS07975 90e5f098c7d765bfa751a91658323624 212 PANTHER PTHR37810 1 212 2.8E-21 T 25-04-2016 SMA_RS08080 5eb3dfd473f4e74c89be31affb3e60af 254 PANTHER PTHR24220 126 253 9.9E-126 T 25-04-2016 SMA_RS08080 5eb3dfd473f4e74c89be31affb3e60af 254 PANTHER PTHR24220 5 110 9.9E-126 T 25-04-2016 SMA_RS08080 5eb3dfd473f4e74c89be31affb3e60af 254 PANTHER PTHR24220:SF358 126 253 9.9E-126 T 25-04-2016 SMA_RS08080 5eb3dfd473f4e74c89be31affb3e60af 254 PANTHER PTHR24220:SF358 5 110 9.9E-126 T 25-04-2016 SMA_RS08080 5eb3dfd473f4e74c89be31affb3e60af 254 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 229 251 2.0E-12 T 25-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal SMA_RS08080 5eb3dfd473f4e74c89be31affb3e60af 254 SMART SM00382 28 228 1.3E-12 T 25-04-2016 IPR003593 AAA+ ATPase domain SMA_RS08080 5eb3dfd473f4e74c89be31affb3e60af 254 SUPERFAMILY SSF52540 3 250 3.24E-65 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS08080 5eb3dfd473f4e74c89be31affb3e60af 254 Gene3D G3DSA:3.40.50.300 3 249 1.5E-72 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS08080 5eb3dfd473f4e74c89be31affb3e60af 254 Pfam PF00005 ABC transporter 21 179 1.3E-31 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMA_RS00715 d3f07f9261aed196b2373c23e2afd108 155 Pfam PF15980 Putative Competence protein ComGF 48 144 1.1E-22 T 25-04-2016 IPR016977 Competence operon G, ComGF SMA_RS00715 d3f07f9261aed196b2373c23e2afd108 155 PIRSF PIRSF031611 4 155 7.3E-53 T 25-04-2016 IPR016977 Competence operon G, ComGF SMA_RS06885 2bb6f88d430755274f22a30d06bc0296 680 SUPERFAMILY SSF90123 162 433 2.22E-23 T 25-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SMA_RS06885 2bb6f88d430755274f22a30d06bc0296 680 ProSitePatterns PS00211 ABC transporters family signature. 601 615 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SMA_RS06885 2bb6f88d430755274f22a30d06bc0296 680 SMART SM00382 490 679 4.5E-9 T 25-04-2016 IPR003593 AAA+ ATPase domain SMA_RS06885 2bb6f88d430755274f22a30d06bc0296 680 Gene3D G3DSA:1.20.1560.10 162 445 2.2E-15 T 25-04-2016 SMA_RS06885 2bb6f88d430755274f22a30d06bc0296 680 Gene3D G3DSA:3.40.50.300 464 671 1.4E-46 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS06885 2bb6f88d430755274f22a30d06bc0296 680 SUPERFAMILY SSF52540 459 670 1.52E-43 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS06885 2bb6f88d430755274f22a30d06bc0296 680 Gene3D G3DSA:3.90.70.10 12 128 2.6E-13 T 25-04-2016 SMA_RS06885 2bb6f88d430755274f22a30d06bc0296 680 Pfam PF00005 ABC transporter 482 629 2.4E-24 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMA_RS06885 2bb6f88d430755274f22a30d06bc0296 680 Pfam PF00664 ABC transporter transmembrane region 162 422 1.9E-12 T 25-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SMA_RS06885 2bb6f88d430755274f22a30d06bc0296 680 PANTHER PTHR24221:SF234 22 655 2.4E-42 T 25-04-2016 SMA_RS06885 2bb6f88d430755274f22a30d06bc0296 680 Pfam PF03412 Peptidase C39 family 7 130 2.7E-31 T 25-04-2016 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 SMA_RS06885 2bb6f88d430755274f22a30d06bc0296 680 PANTHER PTHR24221 22 655 2.4E-42 T 25-04-2016 SMA_RS03375 cfdd7fb0ebb1126b15375853564906c5 872 SUPERFAMILY SSF55681 5 248 1.89E-79 T 25-04-2016 SMA_RS03375 cfdd7fb0ebb1126b15375853564906c5 872 PANTHER PTHR11777:SF9 1 870 0.0 T 25-04-2016 SMA_RS03375 cfdd7fb0ebb1126b15375853564906c5 872 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 656 698 2.2E-19 T 25-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 SMA_RS03375 cfdd7fb0ebb1126b15375853564906c5 872 SMART SM00863 656 699 3.5E-21 T 25-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 SMA_RS03375 cfdd7fb0ebb1126b15375853564906c5 872 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 872 171.198 T 25-04-2016 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 SMA_RS03375 cfdd7fb0ebb1126b15375853564906c5 872 PRINTS PR00980 Alanyl-tRNA synthetase signature 73 84 8.1E-30 T 25-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 SMA_RS03375 cfdd7fb0ebb1126b15375853564906c5 872 PRINTS PR00980 Alanyl-tRNA synthetase signature 199 210 8.1E-30 T 25-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 SMA_RS03375 cfdd7fb0ebb1126b15375853564906c5 872 PRINTS PR00980 Alanyl-tRNA synthetase signature 229 242 8.1E-30 T 25-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 SMA_RS03375 cfdd7fb0ebb1126b15375853564906c5 872 PRINTS PR00980 Alanyl-tRNA synthetase signature 278 294 8.1E-30 T 25-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 SMA_RS03375 cfdd7fb0ebb1126b15375853564906c5 872 PRINTS PR00980 Alanyl-tRNA synthetase signature 302 315 8.1E-30 T 25-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 SMA_RS03375 cfdd7fb0ebb1126b15375853564906c5 872 Pfam PF02272 DHHA1 domain 804 869 2.1E-11 T 25-04-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7 SMA_RS03375 cfdd7fb0ebb1126b15375853564906c5 872 SUPERFAMILY SSF55186 555 714 4.32E-53 T 25-04-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 SMA_RS03375 cfdd7fb0ebb1126b15375853564906c5 872 Pfam PF01411 tRNA synthetases class II (A) 8 559 1.8E-184 T 25-04-2016 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 SMA_RS03375 cfdd7fb0ebb1126b15375853564906c5 872 Gene3D G3DSA:3.30.980.10 564 624 1.6E-4 T 25-04-2016 SMA_RS03375 cfdd7fb0ebb1126b15375853564906c5 872 PANTHER PTHR11777 1 870 0.0 T 25-04-2016 SMA_RS03375 cfdd7fb0ebb1126b15375853564906c5 872 SUPERFAMILY SSF101353 249 442 7.45E-66 T 25-04-2016 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7|Reactome: REACT_71 SMA_RS03375 cfdd7fb0ebb1126b15375853564906c5 872 Gene3D G3DSA:3.30.930.10 4 244 1.4E-86 T 25-04-2016 SMA_RS03375 cfdd7fb0ebb1126b15375853564906c5 872 SUPERFAMILY SSF50447 463 555 9.18E-14 T 25-04-2016 IPR009000 Translation protein, beta-barrel domain SMA_RS03375 cfdd7fb0ebb1126b15375853564906c5 872 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 8 855 3.5E-293 T 25-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 SMA_RS08600 87ef33ab1df8b79f7c7e26bc2aac61da 364 Hamap MF_01539 UPF0348 protein . 2 361 33.276 T 25-04-2016 IPR008513 Uncharacterised protein family UPF0348 SMA_RS08600 87ef33ab1df8b79f7c7e26bc2aac61da 364 Gene3D G3DSA:3.40.50.620 1 213 5.4E-74 T 25-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SMA_RS08600 87ef33ab1df8b79f7c7e26bc2aac61da 364 Pfam PF05636 HIGH Nucleotidyl Transferase 1 332 3.2E-107 T 25-04-2016 IPR008513 Uncharacterised protein family UPF0348 SMA_RS08600 87ef33ab1df8b79f7c7e26bc2aac61da 364 PANTHER PTHR37825 2 362 5.8E-90 T 25-04-2016 SMA_RS08600 87ef33ab1df8b79f7c7e26bc2aac61da 364 PANTHER PTHR37825:SF1 2 362 5.8E-90 T 25-04-2016 SMA_RS08600 87ef33ab1df8b79f7c7e26bc2aac61da 364 SUPERFAMILY SSF52374 10 138 2.22E-17 T 25-04-2016 SMA_RS08600 87ef33ab1df8b79f7c7e26bc2aac61da 364 SUPERFAMILY SSF52374 186 211 2.22E-17 T 25-04-2016 SMA_RS03780 86d2a181ea0a3d81ffa05f7fac47cbc1 138 Pfam PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain 89 135 4.7E-17 T 25-04-2016 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain SMA_RS03780 86d2a181ea0a3d81ffa05f7fac47cbc1 138 Gene3D G3DSA:2.60.15.10 4 92 3.0E-25 T 25-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 SMA_RS03780 86d2a181ea0a3d81ffa05f7fac47cbc1 138 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 4 133 2.8E-28 T 25-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 SMA_RS03780 86d2a181ea0a3d81ffa05f7fac47cbc1 138 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 20 87 5.0E-25 T 25-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 SMA_RS03780 86d2a181ea0a3d81ffa05f7fac47cbc1 138 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 4 85 1.0E-26 T 25-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 SMA_RS03780 86d2a181ea0a3d81ffa05f7fac47cbc1 138 PANTHER PTHR13822 4 135 1.1E-27 T 25-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 SMA_RS03780 86d2a181ea0a3d81ffa05f7fac47cbc1 138 Gene3D G3DSA:1.20.5.440 93 137 6.2E-16 T 25-04-2016 SMA_RS03780 86d2a181ea0a3d81ffa05f7fac47cbc1 138 SUPERFAMILY SSF51344 3 87 9.68E-23 T 25-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 SMA_RS03780 86d2a181ea0a3d81ffa05f7fac47cbc1 138 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 2 135 22.231 T 25-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 SMA_RS08230 6933e8fd4fc3bc61726739020f8abf87 187 PANTHER PTHR35276:SF1 2 187 7.3E-47 T 25-04-2016 SMA_RS08230 6933e8fd4fc3bc61726739020f8abf87 187 Gene3D G3DSA:3.40.50.150 18 138 2.5E-13 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMA_RS08230 6933e8fd4fc3bc61726739020f8abf87 187 Pfam PF06962 Putative rRNA methylase 44 179 6.3E-51 T 25-04-2016 IPR010719 Putative rRNA methylase KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- SMA_RS08230 6933e8fd4fc3bc61726739020f8abf87 187 PANTHER PTHR35276 2 187 7.3E-47 T 25-04-2016 SMA_RS08230 6933e8fd4fc3bc61726739020f8abf87 187 SUPERFAMILY SSF53335 8 142 1.67E-18 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMA_RS09165 4587bc50e69691a118dc61f6d111599d 123 ProSitePatterns PS00552 MerR-type HTH domain signature. 16 38 - T 25-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SMA_RS09165 4587bc50e69691a118dc61f6d111599d 123 PANTHER PTHR30204 5 111 1.9E-37 T 25-04-2016 SMA_RS09165 4587bc50e69691a118dc61f6d111599d 123 SUPERFAMILY SSF46955 13 94 1.83E-20 T 25-04-2016 IPR009061 Putative DNA-binding domain SMA_RS09165 4587bc50e69691a118dc61f6d111599d 123 SMART SM00422 13 81 1.1E-21 T 25-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SMA_RS09165 4587bc50e69691a118dc61f6d111599d 123 PANTHER PTHR30204:SF8 5 111 1.9E-37 T 25-04-2016 SMA_RS09165 4587bc50e69691a118dc61f6d111599d 123 Gene3D G3DSA:1.10.1660.10 14 105 5.2E-23 T 25-04-2016 SMA_RS09165 4587bc50e69691a118dc61f6d111599d 123 Pfam PF13411 MerR HTH family regulatory protein 14 76 8.0E-20 T 25-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SMA_RS01635 7c0cee8def1449e292f429a3c91e6726 187 Pfam PF04260 Protein of unknown function (DUF436) 9 179 1.9E-71 T 25-04-2016 IPR006340 Protein of unknown function DUF436 SMA_RS01635 7c0cee8def1449e292f429a3c91e6726 187 PIRSF PIRSF007510 1 182 1.8E-87 T 25-04-2016 IPR006340 Protein of unknown function DUF436 SMA_RS01635 7c0cee8def1449e292f429a3c91e6726 187 Hamap MF_00800 UPF0340 protein . 1 187 95.815 T 25-04-2016 IPR006340 Protein of unknown function DUF436 SMA_RS01635 7c0cee8def1449e292f429a3c91e6726 187 Gene3D G3DSA:3.40.50.10360 4 186 7.9E-83 T 25-04-2016 IPR006340 Protein of unknown function DUF436 SMA_RS01635 7c0cee8def1449e292f429a3c91e6726 187 SUPERFAMILY SSF110710 4 186 2.17E-78 T 25-04-2016 SMA_RS01635 7c0cee8def1449e292f429a3c91e6726 187 TIGRFAM TIGR01440 TIGR01440: TIGR01440 family protein 8 179 9.6E-78 T 25-04-2016 IPR006340 Protein of unknown function DUF436 SMA_RS01635 7c0cee8def1449e292f429a3c91e6726 187 ProDom PD102102 UPF0340 3D-STRUCTURE YWLG SMU.87 STU1894 BT9727_4999 TRANSFERASE TTE0860 SPY1898/M5005_SPY1614 TT1679 16 186 2.0E-80 T 25-04-2016 IPR006340 Protein of unknown function DUF436 SMA_RS07815 58bf1288dc0dc9d8046b65cbb63bb018 135 ProSitePatterns PS01069 Prokaryotic diacylglycerol kinase signature. 76 87 - T 25-04-2016 IPR000829 Diacylglycerol kinase, prokaryotic GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039 SMA_RS07815 58bf1288dc0dc9d8046b65cbb63bb018 135 Gene3D G3DSA:1.10.3830.10 10 128 4.4E-41 T 25-04-2016 SMA_RS07815 58bf1288dc0dc9d8046b65cbb63bb018 135 PANTHER PTHR34299:SF1 3 133 2.4E-32 T 25-04-2016 SMA_RS07815 58bf1288dc0dc9d8046b65cbb63bb018 135 Pfam PF01219 Prokaryotic diacylglycerol kinase 23 124 1.4E-32 T 25-04-2016 IPR000829 Diacylglycerol kinase, prokaryotic GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039 SMA_RS07815 58bf1288dc0dc9d8046b65cbb63bb018 135 PANTHER PTHR34299 3 133 2.4E-32 T 25-04-2016 SMA_RS05160 1772f1de4f2e9b65f09c2e201a759e89 311 SUPERFAMILY SSF51569 11 291 7.01E-91 T 25-04-2016 SMA_RS05160 1772f1de4f2e9b65f09c2e201a759e89 311 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 11 290 5.3E-92 T 25-04-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 SMA_RS05160 1772f1de4f2e9b65f09c2e201a759e89 311 Gene3D G3DSA:3.20.20.70 11 291 6.2E-107 T 25-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SMA_RS05160 1772f1de4f2e9b65f09c2e201a759e89 311 SMART SM01130 8 296 2.1E-116 T 25-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 SMA_RS05160 1772f1de4f2e9b65f09c2e201a759e89 311 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 140 170 - T 25-04-2016 IPR020625 Schiff base-forming aldolase, active site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 SMA_RS05160 1772f1de4f2e9b65f09c2e201a759e89 311 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 7 293 60.241 T 25-04-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 SMA_RS05160 1772f1de4f2e9b65f09c2e201a759e89 311 PIRSF PIRSF001365 7 301 6.8E-86 T 25-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 SMA_RS05160 1772f1de4f2e9b65f09c2e201a759e89 311 Pfam PF00701 Dihydrodipicolinate synthetase family 10 282 1.9E-83 T 25-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 SMA_RS05160 1772f1de4f2e9b65f09c2e201a759e89 311 PRINTS PR00146 Dihydrodipicolinate synthase signature 77 95 3.2E-30 T 25-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 SMA_RS05160 1772f1de4f2e9b65f09c2e201a759e89 311 PRINTS PR00146 Dihydrodipicolinate synthase signature 135 152 3.2E-30 T 25-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 SMA_RS05160 1772f1de4f2e9b65f09c2e201a759e89 311 PRINTS PR00146 Dihydrodipicolinate synthase signature 110 126 3.2E-30 T 25-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 SMA_RS05160 1772f1de4f2e9b65f09c2e201a759e89 311 PRINTS PR00146 Dihydrodipicolinate synthase signature 41 62 3.2E-30 T 25-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 SMA_RS05160 1772f1de4f2e9b65f09c2e201a759e89 311 PANTHER PTHR12128:SF34 1 308 5.9E-123 T 25-04-2016 SMA_RS05160 1772f1de4f2e9b65f09c2e201a759e89 311 PANTHER PTHR12128 1 308 5.9E-123 T 25-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 SMA_RS07700 f3b6af55cfec9eee9642a51b3f8911a9 230 Pfam PF00072 Response regulator receiver domain 4 112 7.3E-27 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMA_RS07700 f3b6af55cfec9eee9642a51b3f8911a9 230 SMART SM00862 151 226 1.6E-18 T 25-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SMA_RS07700 f3b6af55cfec9eee9642a51b3f8911a9 230 Gene3D G3DSA:3.40.50.2300 1 124 1.2E-35 T 25-04-2016 SMA_RS07700 f3b6af55cfec9eee9642a51b3f8911a9 230 PANTHER PTHR26402:SF50 2 228 6.8E-70 T 25-04-2016 SMA_RS07700 f3b6af55cfec9eee9642a51b3f8911a9 230 Pfam PF00486 Transcriptional regulatory protein, C terminal 152 226 9.6E-22 T 25-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SMA_RS07700 f3b6af55cfec9eee9642a51b3f8911a9 230 SMART SM00448 2 112 5.5E-37 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMA_RS07700 f3b6af55cfec9eee9642a51b3f8911a9 230 Gene3D G3DSA:1.10.10.10 129 229 4.1E-30 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMA_RS07700 f3b6af55cfec9eee9642a51b3f8911a9 230 SUPERFAMILY SSF52172 1 175 1.66E-36 T 25-04-2016 IPR011006 CheY-like superfamily SMA_RS07700 f3b6af55cfec9eee9642a51b3f8911a9 230 PANTHER PTHR26402 2 228 6.8E-70 T 25-04-2016 SMA_RS03915 2d39c099d99bdc12bf6556ac6e52f75a 216 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 190 206 - T 25-04-2016 IPR004035 Endonuclease III, iron-sulphur binding site SMA_RS03915 2d39c099d99bdc12bf6556ac6e52f75a 216 Hamap MF_00942 Endonuclease III [nth]. 1 212 38.971 T 25-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 SMA_RS03915 2d39c099d99bdc12bf6556ac6e52f75a 216 Pfam PF00633 Helix-hairpin-helix motif 102 129 4.5E-9 T 25-04-2016 IPR000445 Helix-hairpin-helix motif GO:0003677 SMA_RS03915 2d39c099d99bdc12bf6556ac6e52f75a 216 PANTHER PTHR10359 6 215 1.4E-79 T 25-04-2016 SMA_RS03915 2d39c099d99bdc12bf6556ac6e52f75a 216 TIGRFAM TIGR01083 nth: endonuclease III 6 197 1.2E-79 T 25-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 SMA_RS03915 2d39c099d99bdc12bf6556ac6e52f75a 216 SUPERFAMILY SSF48150 6 213 1.43E-74 T 25-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 SMA_RS03915 2d39c099d99bdc12bf6556ac6e52f75a 216 Gene3D G3DSA:1.10.340.30 25 124 9.0E-38 T 25-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 SMA_RS03915 2d39c099d99bdc12bf6556ac6e52f75a 216 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 190 206 1.0E-5 T 25-04-2016 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: REACT_216 SMA_RS03915 2d39c099d99bdc12bf6556ac6e52f75a 216 PIRSF PIRSF001435 2 215 3.3E-56 T 25-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 SMA_RS03915 2d39c099d99bdc12bf6556ac6e52f75a 216 Gene3D G3DSA:1.10.1670.10 125 212 3.7E-35 T 25-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal SMA_RS03915 2d39c099d99bdc12bf6556ac6e52f75a 216 SMART SM00525 189 209 6.7E-5 T 25-04-2016 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: REACT_216 SMA_RS03915 2d39c099d99bdc12bf6556ac6e52f75a 216 SMART SM00478 40 188 3.6E-60 T 25-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 SMA_RS03915 2d39c099d99bdc12bf6556ac6e52f75a 216 ProSitePatterns PS01155 Endonuclease III family signature. 104 133 - T 25-04-2016 IPR004036 Endonuclease III-like, conserved site-2 Reactome: REACT_216 SMA_RS03915 2d39c099d99bdc12bf6556ac6e52f75a 216 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 36 171 2.0E-25 T 25-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 SMA_RS05000 50ed6fffb8ae12013efec8a3372be940 377 PANTHER PTHR30408 7 194 7.8E-17 T 25-04-2016 SMA_RS05000 50ed6fffb8ae12013efec8a3372be940 377 PANTHER PTHR30408:SF2 7 194 7.8E-17 T 25-04-2016 SMA_RS05000 50ed6fffb8ae12013efec8a3372be940 377 Pfam PF01420 Type I restriction modification DNA specificity domain 20 181 7.8E-21 T 25-04-2016 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 SMA_RS05000 50ed6fffb8ae12013efec8a3372be940 377 Pfam PF01420 Type I restriction modification DNA specificity domain 212 370 1.6E-20 T 25-04-2016 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 SMA_RS05000 50ed6fffb8ae12013efec8a3372be940 377 SUPERFAMILY SSF116734 206 370 1.8E-32 T 25-04-2016 SMA_RS05000 50ed6fffb8ae12013efec8a3372be940 377 SUPERFAMILY SSF116734 14 197 2.78E-40 T 25-04-2016 SMA_RS09440 e7ae742e80dd18aa9f5b5a0825a120c2 512 TIGRFAM TIGR01734 D-ala-DACP-lig: D-alanine--poly(phosphoribitol) ligase, subunit 1 4 510 3.3E-232 T 25-04-2016 IPR010072 D-alanine--poly(phosphoribitol) ligase subunit 1 GO:0005524|GO:0047473|GO:0070395 KEGG: 00473+6.1.1.13|UniPathway: UPA00556 SMA_RS09440 e7ae742e80dd18aa9f5b5a0825a120c2 512 Hamap MF_00593 D-alanine--poly(phosphoribitol) ligase subunit 1 [dltA]. 1 511 277.384 T 25-04-2016 IPR010072 D-alanine--poly(phosphoribitol) ligase subunit 1 GO:0005524|GO:0047473|GO:0070395 KEGG: 00473+6.1.1.13|UniPathway: UPA00556 SMA_RS09440 e7ae742e80dd18aa9f5b5a0825a120c2 512 SUPERFAMILY SSF56801 6 508 1.03E-112 T 25-04-2016 SMA_RS09440 e7ae742e80dd18aa9f5b5a0825a120c2 512 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 30 431 8.5E-104 T 25-04-2016 IPR010071 Amino acid adenylation domain SMA_RS09440 e7ae742e80dd18aa9f5b5a0825a120c2 512 ProSitePatterns PS00455 Putative AMP-binding domain signature. 149 160 - T 25-04-2016 IPR020845 AMP-binding, conserved site SMA_RS09440 e7ae742e80dd18aa9f5b5a0825a120c2 512 Gene3D G3DSA:3.40.50.980 156 321 4.6E-38 T 25-04-2016 SMA_RS09440 e7ae742e80dd18aa9f5b5a0825a120c2 512 Pfam PF13193 AMP-binding enzyme C-terminal domain 417 499 2.2E-7 T 25-04-2016 IPR025110 AMP-binding enzyme C-terminal domain SMA_RS09440 e7ae742e80dd18aa9f5b5a0825a120c2 512 Pfam PF00501 AMP-binding enzyme 12 407 5.6E-76 T 25-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 SMA_RS09440 e7ae742e80dd18aa9f5b5a0825a120c2 512 Gene3D G3DSA:3.40.50.980 5 155 7.6E-27 T 25-04-2016 SMA_RS09440 e7ae742e80dd18aa9f5b5a0825a120c2 512 Gene3D G3DSA:2.30.38.10 322 395 1.2E-17 T 25-04-2016 SMA_RS09440 e7ae742e80dd18aa9f5b5a0825a120c2 512 PANTHER PTHR24095 3 499 2.6E-155 T 25-04-2016 SMA_RS09440 e7ae742e80dd18aa9f5b5a0825a120c2 512 Gene3D G3DSA:3.30.300.30 402 508 1.5E-25 T 25-04-2016 SMA_RS05600 567e5bd38d6e24d1d9d6d6cabe717aa7 120 SUPERFAMILY SSF55620 2 119 2.89E-40 T 25-04-2016 SMA_RS05600 567e5bd38d6e24d1d9d6d6cabe717aa7 120 Pfam PF02152 Dihydroneopterin aldolase 4 116 1.8E-31 T 25-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 SMA_RS05600 567e5bd38d6e24d1d9d6d6cabe717aa7 120 TIGRFAM TIGR00525 folB: dihydroneopterin aldolase 2 117 1.7E-37 T 25-04-2016 IPR006156 Dihydroneopterin aldolase GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 SMA_RS05600 567e5bd38d6e24d1d9d6d6cabe717aa7 120 Gene3D G3DSA:3.30.1130.10 1 119 4.4E-42 T 25-04-2016 SMA_RS05600 567e5bd38d6e24d1d9d6d6cabe717aa7 120 SMART SM00905 4 117 7.4E-50 T 25-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 SMA_RS05600 567e5bd38d6e24d1d9d6d6cabe717aa7 120 TIGRFAM TIGR00526 folB_dom: FolB domain 1 119 4.7E-30 T 25-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 SMA_RS05600 567e5bd38d6e24d1d9d6d6cabe717aa7 120 PANTHER PTHR20941 1 120 1.2E-34 T 25-04-2016 SMA_RS08215 dea11ceb32690dabb153abb3fbc79186 262 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SMA_RS08215 dea11ceb32690dabb153abb3fbc79186 262 Pfam PF00005 ABC transporter 19 170 5.8E-29 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMA_RS08215 dea11ceb32690dabb153abb3fbc79186 262 Gene3D G3DSA:3.40.50.300 4 234 1.7E-50 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS08215 dea11ceb32690dabb153abb3fbc79186 262 PANTHER PTHR24220 5 246 5.1E-84 T 25-04-2016 SMA_RS08215 dea11ceb32690dabb153abb3fbc79186 262 SMART SM00382 28 228 3.2E-13 T 25-04-2016 IPR003593 AAA+ ATPase domain SMA_RS08215 dea11ceb32690dabb153abb3fbc79186 262 PANTHER PTHR24220:SF383 5 246 5.1E-84 T 25-04-2016 SMA_RS08215 dea11ceb32690dabb153abb3fbc79186 262 SUPERFAMILY SSF52540 4 232 1.09E-49 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS03800 5dc7f53580a373bca6d8b02dfb019f60 288 ProSitePatterns PS01070 DNA/RNA non-specific endonucleases active site. 173 181 - T 25-04-2016 IPR018524 DNA/RNA non-specific endonuclease, active site GO:0003676|GO:0016787|GO:0046872 SMA_RS03800 5dc7f53580a373bca6d8b02dfb019f60 288 SMART SM00892 111 287 3.8E-25 T 25-04-2016 IPR001604 DNA/RNA non-specific endonuclease GO:0003676|GO:0016787|GO:0046872 SMA_RS03800 5dc7f53580a373bca6d8b02dfb019f60 288 Pfam PF01223 DNA/RNA non-specific endonuclease 95 247 1.0E-15 T 25-04-2016 IPR001604 DNA/RNA non-specific endonuclease GO:0003676|GO:0016787|GO:0046872 SMA_RS09355 512843a6ff0f432cb5fd8682c8c1982c 256 PIRSF PIRSF005902 1 256 1.0E-79 T 25-04-2016 IPR001130 TatD family GO:0016788 SMA_RS09355 512843a6ff0f432cb5fd8682c8c1982c 256 PANTHER PTHR10060 1 256 5.5E-122 T 25-04-2016 IPR001130 TatD family GO:0016788 SMA_RS09355 512843a6ff0f432cb5fd8682c8c1982c 256 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 3 11 - T 25-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 SMA_RS09355 512843a6ff0f432cb5fd8682c8c1982c 256 PANTHER PTHR10060:SF20 1 256 5.5E-122 T 25-04-2016 SMA_RS09355 512843a6ff0f432cb5fd8682c8c1982c 256 Pfam PF01026 TatD related DNase 4 254 4.6E-79 T 25-04-2016 IPR001130 TatD family GO:0016788 SMA_RS09355 512843a6ff0f432cb5fd8682c8c1982c 256 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 3 254 6.2E-82 T 25-04-2016 IPR015991 Uncharacterised deoxyribonuclease TatD-type GO:0004536 SMA_RS09355 512843a6ff0f432cb5fd8682c8c1982c 256 SUPERFAMILY SSF51556 1 254 1.55E-89 T 25-04-2016 IPR032466 Metal-dependent hydrolase SMA_RS09355 512843a6ff0f432cb5fd8682c8c1982c 256 Gene3D G3DSA:3.20.20.140 1 254 8.1E-92 T 25-04-2016 SMA_RS09355 512843a6ff0f432cb5fd8682c8c1982c 256 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 190 206 - T 25-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 SMA_RS07820 cc6fefc32ca99a2f600065040c96e920 165 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 37 161 2.5E-39 T 25-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 SMA_RS07820 cc6fefc32ca99a2f600065040c96e920 165 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 130 140 - T 25-04-2016 IPR020549 Endoribonuclease YbeY, conserved site SMA_RS07820 cc6fefc32ca99a2f600065040c96e920 165 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 20 164 21.869 T 25-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 SMA_RS07820 cc6fefc32ca99a2f600065040c96e920 165 Gene3D G3DSA:3.40.390.30 6 164 1.0E-43 T 25-04-2016 IPR023091 Metalloprotease catalytic domain, predicted GO:0004222 SMA_RS07820 cc6fefc32ca99a2f600065040c96e920 165 PANTHER PTHR22881 37 164 3.4E-36 T 25-04-2016 SMA_RS07820 cc6fefc32ca99a2f600065040c96e920 165 Pfam PF02130 Uncharacterized protein family UPF0054 14 159 1.7E-40 T 25-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 SMA_RS07820 cc6fefc32ca99a2f600065040c96e920 165 SUPERFAMILY SSF55486 2 164 9.77E-40 T 25-04-2016 SMA_RS05305 279619ca50f5814eb535a78a57d24567 418 Pfam PF01610 Transposase 154 400 2.2E-49 T 25-04-2016 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain SMA_RS05305 279619ca50f5814eb535a78a57d24567 418 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 39 85 2.2E-11 T 25-04-2016 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger SMA_RS05305 279619ca50f5814eb535a78a57d24567 418 PANTHER PTHR33498 1 414 1.2E-110 T 25-04-2016 SMA_RS05305 279619ca50f5814eb535a78a57d24567 418 PANTHER PTHR33498:SF1 1 414 1.2E-110 T 25-04-2016 SMA_RS05305 279619ca50f5814eb535a78a57d24567 418 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 92 140 1.8E-7 T 25-04-2016 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain SMA_RS08015 d1ac15e96e71d868808901467f65665f 392 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 96 272 2.4E-41 T 25-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 SMA_RS08015 d1ac15e96e71d868808901467f65665f 392 PANTHER PTHR10996 36 347 2.4E-99 T 25-04-2016 SMA_RS08015 d1ac15e96e71d868808901467f65665f 392 SUPERFAMILY SSF51735 84 274 3.23E-40 T 25-04-2016 IPR016040 NAD(P)-binding domain SMA_RS08015 d1ac15e96e71d868808901467f65665f 392 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 219 235 - T 25-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site SMA_RS08015 d1ac15e96e71d868808901467f65665f 392 Gene3D G3DSA:3.40.50.720 48 98 1.2E-19 T 25-04-2016 IPR016040 NAD(P)-binding domain SMA_RS08015 d1ac15e96e71d868808901467f65665f 392 SUPERFAMILY SSF55021 307 389 6.3E-13 T 25-04-2016 SMA_RS08015 d1ac15e96e71d868808901467f65665f 392 PANTHER PTHR10996:SF20 36 347 2.4E-99 T 25-04-2016 SMA_RS08015 d1ac15e96e71d868808901467f65665f 392 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 30 305 4.0E-17 T 25-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 SMA_RS08015 d1ac15e96e71d868808901467f65665f 392 Gene3D G3DSA:3.40.50.720 99 276 1.4E-45 T 25-04-2016 IPR016040 NAD(P)-binding domain SMA_RS08015 d1ac15e96e71d868808901467f65665f 392 SUPERFAMILY SSF52283 28 109 1.89E-19 T 25-04-2016 SMA_RS08015 d1ac15e96e71d868808901467f65665f 392 Gene3D G3DSA:3.30.70.260 302 389 1.1E-20 T 25-04-2016 SMA_RS08015 d1ac15e96e71d868808901467f65665f 392 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 139 166 - T 25-04-2016 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 SMA_RS02860 82310c604b2e2aa18912d2b6ad50b12a 368 PANTHER PTHR30544 1 368 8.1E-170 T 25-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SMA_RS02860 82310c604b2e2aa18912d2b6ad50b12a 368 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 5 357 6.8E-132 T 25-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SMA_RS02860 82310c604b2e2aa18912d2b6ad50b12a 368 Pfam PF04055 Radical SAM superfamily 113 286 8.1E-15 T 25-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 SMA_RS02860 82310c604b2e2aa18912d2b6ad50b12a 368 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 9 356 70.003 T 25-04-2016 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SMA_RS02860 82310c604b2e2aa18912d2b6ad50b12a 368 SUPERFAMILY SSF102114 104 313 5.1E-13 T 25-04-2016 SMA_RS02860 82310c604b2e2aa18912d2b6ad50b12a 368 Gene3D G3DSA:3.20.20.70 104 337 2.0E-14 T 25-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SMA_RS02860 82310c604b2e2aa18912d2b6ad50b12a 368 PANTHER PTHR30544:SF5 1 368 8.1E-170 T 25-04-2016 SMA_RS02860 82310c604b2e2aa18912d2b6ad50b12a 368 PIRSF PIRSF006004 4 368 6.3E-137 T 25-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SMA_RS02860 82310c604b2e2aa18912d2b6ad50b12a 368 Pfam PF13394 4Fe-4S single cluster domain 117 212 1.2E-7 T 25-04-2016 SMA_RS03335 d17379d8941b900c956de3b21f1bb3fb 234 PANTHER PTHR11280 1 234 3.7E-99 T 25-04-2016 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|UniPathway: UPA00629 SMA_RS03335 d17379d8941b900c956de3b21f1bb3fb 234 Hamap MF_01241 Glucosamine-6-phosphate deaminase [nagB]. 1 233 41.207 T 25-04-2016 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|UniPathway: UPA00629 SMA_RS03335 d17379d8941b900c956de3b21f1bb3fb 234 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 24 220 4.6E-16 T 25-04-2016 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 SMA_RS03335 d17379d8941b900c956de3b21f1bb3fb 234 ProSitePatterns PS01161 Glucosamine/galactosamine-6-phosphate isomerases signature. 112 130 - T 25-04-2016 IPR018321 Glucosamine-6-phosphate isomerase, conserved site GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|UniPathway: UPA00629 SMA_RS03335 d17379d8941b900c956de3b21f1bb3fb 234 SUPERFAMILY SSF100950 1 233 2.98E-83 T 25-04-2016 SMA_RS03335 d17379d8941b900c956de3b21f1bb3fb 234 TIGRFAM TIGR00502 nagB: glucosamine-6-phosphate deaminase 1 233 2.3E-71 T 25-04-2016 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|UniPathway: UPA00629 SMA_RS03335 d17379d8941b900c956de3b21f1bb3fb 234 Gene3D G3DSA:3.40.50.1360 1 234 2.3E-84 T 25-04-2016 SMA_RS03400 5a09c26382c30c65b099892e4b36cb0d 340 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 141 157 - T 25-04-2016 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 SMA_RS03400 5a09c26382c30c65b099892e4b36cb0d 340 SUPERFAMILY SSF51735 2 173 1.64E-38 T 25-04-2016 IPR016040 NAD(P)-binding domain SMA_RS03400 5a09c26382c30c65b099892e4b36cb0d 340 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 155 311 1.0E-21 T 25-04-2016 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 SMA_RS03400 5a09c26382c30c65b099892e4b36cb0d 340 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 2 125 2.8E-26 T 25-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 SMA_RS03400 5a09c26382c30c65b099892e4b36cb0d 340 SUPERFAMILY SSF55347 146 308 3.63E-51 T 25-04-2016 SMA_RS03400 5a09c26382c30c65b099892e4b36cb0d 340 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 1 334 39.848 T 25-04-2016 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 SMA_RS03400 5a09c26382c30c65b099892e4b36cb0d 340 SMART SM00859 2 140 4.4E-34 T 25-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 SMA_RS03400 5a09c26382c30c65b099892e4b36cb0d 340 Gene3D G3DSA:3.40.50.720 1 154 4.2E-49 T 25-04-2016 IPR016040 NAD(P)-binding domain SMA_RS03400 5a09c26382c30c65b099892e4b36cb0d 340 PANTHER PTHR32338 1 340 2.1E-134 T 25-04-2016 SMA_RS03400 5a09c26382c30c65b099892e4b36cb0d 340 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 1 337 9.2E-119 T 25-04-2016 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 SMA_RS03400 5a09c26382c30c65b099892e4b36cb0d 340 PANTHER PTHR32338:SF8 1 340 2.1E-134 T 25-04-2016 SMA_RS03400 5a09c26382c30c65b099892e4b36cb0d 340 Gene3D G3DSA:3.30.360.10 155 308 1.4E-54 T 25-04-2016 SMA_RS09955 c16f369d5f174df8b4d9100ddd3781b2 380 PANTHER PTHR21148 1 371 5.6E-171 T 25-04-2016 SMA_RS09955 c16f369d5f174df8b4d9100ddd3781b2 380 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 6 365 55.518 T 25-04-2016 IPR004803 Queuine tRNA-ribosyltransferase GO:0008033|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 SMA_RS09955 c16f369d5f174df8b4d9100ddd3781b2 380 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 8 374 1.3E-161 T 25-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 SMA_RS09955 c16f369d5f174df8b4d9100ddd3781b2 380 PANTHER PTHR21148:SF26 1 371 5.6E-171 T 25-04-2016 SMA_RS09955 c16f369d5f174df8b4d9100ddd3781b2 380 Pfam PF01702 Queuine tRNA-ribosyltransferase 134 367 1.6E-87 T 25-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 SMA_RS09955 c16f369d5f174df8b4d9100ddd3781b2 380 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 8 375 3.1E-170 T 25-04-2016 IPR004803 Queuine tRNA-ribosyltransferase GO:0008033|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 SMA_RS09955 c16f369d5f174df8b4d9100ddd3781b2 380 Gene3D G3DSA:3.20.20.105 6 373 1.3E-159 T 25-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 SMA_RS09955 c16f369d5f174df8b4d9100ddd3781b2 380 SUPERFAMILY SSF51713 7 371 6.93E-152 T 25-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 SMA_RS01860 8d7b42ea40b6bd475d95eb5b4207f11e 554 SMART SM01120 34 199 5.4E-71 T 25-04-2016 IPR004007 DhaL domain GO:0004371|GO:0006071 SMA_RS01860 8d7b42ea40b6bd475d95eb5b4207f11e 554 Pfam PF13684 Dihydroxyacetone kinase family 240 554 1.3E-124 T 25-04-2016 IPR033470 Uncharacterised protein, DhaK domain SMA_RS01860 8d7b42ea40b6bd475d95eb5b4207f11e 554 SMART SM01121 240 554 2.3E-189 T 25-04-2016 IPR033470 Uncharacterised protein, DhaK domain SMA_RS01860 8d7b42ea40b6bd475d95eb5b4207f11e 554 Pfam PF02734 DAK2 domain 34 198 4.6E-42 T 25-04-2016 IPR004007 DhaL domain GO:0004371|GO:0006071 SMA_RS01860 8d7b42ea40b6bd475d95eb5b4207f11e 554 PANTHER PTHR33434:SF4 1 554 1.3E-244 T 25-04-2016 SMA_RS01860 8d7b42ea40b6bd475d95eb5b4207f11e 554 SUPERFAMILY SSF101473 4 200 3.66E-47 T 25-04-2016 IPR004007 DhaL domain GO:0004371|GO:0006071 SMA_RS01860 8d7b42ea40b6bd475d95eb5b4207f11e 554 TIGRFAM TIGR03599 YloV: DAK2 domain fusion protein YloV 9 554 4.1E-212 T 25-04-2016 IPR019986 DAK2 domain-containing protein YloV SMA_RS01860 8d7b42ea40b6bd475d95eb5b4207f11e 554 PANTHER PTHR33434 1 554 1.3E-244 T 25-04-2016 SMA_RS05830 9a91b5a915cd55eec3a581b41277e357 279 PRINTS PR00108 Thymidylate synthase family signature 122 141 3.0E-13 T 25-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 SMA_RS05830 9a91b5a915cd55eec3a581b41277e357 279 PRINTS PR00108 Thymidylate synthase family signature 54 75 3.0E-13 T 25-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 SMA_RS05830 9a91b5a915cd55eec3a581b41277e357 279 PRINTS PR00108 Thymidylate synthase family signature 171 197 3.0E-13 T 25-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 SMA_RS05830 9a91b5a915cd55eec3a581b41277e357 279 PRINTS PR00108 Thymidylate synthase family signature 209 226 3.0E-13 T 25-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 SMA_RS05830 9a91b5a915cd55eec3a581b41277e357 279 Gene3D G3DSA:3.30.572.10 8 279 3.2E-63 T 25-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 SMA_RS05830 9a91b5a915cd55eec3a581b41277e357 279 PANTHER PTHR11548:SF1 12 279 1.4E-120 T 25-04-2016 SMA_RS05830 9a91b5a915cd55eec3a581b41277e357 279 PANTHER PTHR11548 12 279 1.4E-120 T 25-04-2016 SMA_RS05830 9a91b5a915cd55eec3a581b41277e357 279 ProSitePatterns PS00091 Thymidylate synthase active site. 133 162 - T 25-04-2016 IPR020940 Thymidylate synthase, active site GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 SMA_RS05830 9a91b5a915cd55eec3a581b41277e357 279 Pfam PF00303 Thymidylate synthase 8 279 5.5E-63 T 25-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 SMA_RS05830 9a91b5a915cd55eec3a581b41277e357 279 SUPERFAMILY SSF55831 4 278 1.44E-69 T 25-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 SMA_RS05830 9a91b5a915cd55eec3a581b41277e357 279 Hamap MF_00008 Thymidylate synthase [thyA]. 5 279 30.449 T 25-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 SMA_RS07300 c7231dde69208a31f87f20667590f86c 393 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 199 222 5.3E-13 T 25-04-2016 SMA_RS07300 c7231dde69208a31f87f20667590f86c 393 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 230 254 5.3E-13 T 25-04-2016 SMA_RS07300 c7231dde69208a31f87f20667590f86c 393 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 116 137 5.3E-13 T 25-04-2016 SMA_RS07300 c7231dde69208a31f87f20667590f86c 393 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 163 187 5.3E-13 T 25-04-2016 SMA_RS07300 c7231dde69208a31f87f20667590f86c 393 Gene3D G3DSA:3.40.640.10 45 275 2.5E-73 T 25-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SMA_RS07300 c7231dde69208a31f87f20667590f86c 393 Gene3D G3DSA:3.90.1150.10 276 393 4.5E-42 T 25-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SMA_RS07300 c7231dde69208a31f87f20667590f86c 393 SUPERFAMILY SSF53383 1 392 1.77E-110 T 25-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SMA_RS07300 c7231dde69208a31f87f20667590f86c 393 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 236 249 - T 25-04-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Reactome: REACT_13 SMA_RS07300 c7231dde69208a31f87f20667590f86c 393 PANTHER PTHR11751:SF306 14 393 6.1E-146 T 25-04-2016 SMA_RS07300 c7231dde69208a31f87f20667590f86c 393 PANTHER PTHR11751 14 393 6.1E-146 T 25-04-2016 SMA_RS07300 c7231dde69208a31f87f20667590f86c 393 Pfam PF00155 Aminotransferase class I and II 32 387 1.1E-71 T 25-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 SMA_RS08040 9ed0094ccdb29bf7ed955787123e8e1b 411 PANTHER PTHR11730 1 403 6.6E-176 T 25-04-2016 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 SMA_RS08040 9ed0094ccdb29bf7ed955787123e8e1b 411 TIGRFAM TIGR00836 amt: ammonium transporter 6 403 1.7E-135 T 25-04-2016 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 SMA_RS08040 9ed0094ccdb29bf7ed955787123e8e1b 411 ProSitePatterns PS01219 Ammonium transporters signature. 157 182 - T 25-04-2016 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 SMA_RS08040 9ed0094ccdb29bf7ed955787123e8e1b 411 Pfam PF00909 Ammonium Transporter Family 7 403 9.5E-122 T 25-04-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 SMA_RS08040 9ed0094ccdb29bf7ed955787123e8e1b 411 Gene3D G3DSA:1.10.3430.10 2 384 1.5E-136 T 25-04-2016 IPR029020 Ammonium/urea transporter SMA_RS08040 9ed0094ccdb29bf7ed955787123e8e1b 411 PANTHER PTHR11730:SF17 1 403 6.6E-176 T 25-04-2016 SMA_RS08040 9ed0094ccdb29bf7ed955787123e8e1b 411 SUPERFAMILY SSF111352 2 384 7.98E-126 T 25-04-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 SMA_RS05995 41f2e6e5917ed48e11fab5860794a003 150 Gene3D G3DSA:1.10.10.10 9 138 3.9E-23 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMA_RS05995 41f2e6e5917ed48e11fab5860794a003 150 SUPERFAMILY SSF46785 8 140 1.3E-22 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMA_RS05995 41f2e6e5917ed48e11fab5860794a003 150 SMART SM00347 21 122 7.1E-14 T 25-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SMA_RS05995 41f2e6e5917ed48e11fab5860794a003 150 PANTHER PTHR33164 9 146 1.3E-13 T 25-04-2016 SMA_RS05995 41f2e6e5917ed48e11fab5860794a003 150 Pfam PF12802 MarR family 26 85 3.7E-7 T 25-04-2016 SMA_RS04095 6cb1a27526c226119dd46c81f3e7f99c 464 Gene3D G3DSA:3.30.559.10 227 463 1.5E-75 T 25-04-2016 IPR023213 Chloramphenicol acetyltransferase-like domain SMA_RS04095 6cb1a27526c226119dd46c81f3e7f99c 464 Pfam PF02817 e3 binding domain 164 199 7.3E-13 T 25-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 SMA_RS04095 6cb1a27526c226119dd46c81f3e7f99c 464 Pfam PF02817 e3 binding domain 124 159 1.5E-16 T 25-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 SMA_RS04095 6cb1a27526c226119dd46c81f3e7f99c 464 Gene3D G3DSA:2.40.50.100 3 82 3.5E-26 T 25-04-2016 SMA_RS04095 6cb1a27526c226119dd46c81f3e7f99c 464 SUPERFAMILY SSF47005 163 203 6.41E-10 T 25-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 SMA_RS04095 6cb1a27526c226119dd46c81f3e7f99c 464 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 233 463 1.2E-72 T 25-04-2016 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 SMA_RS04095 6cb1a27526c226119dd46c81f3e7f99c 464 SUPERFAMILY SSF52777 228 464 3.38E-73 T 25-04-2016 SMA_RS04095 6cb1a27526c226119dd46c81f3e7f99c 464 SUPERFAMILY SSF51230 3 83 1.31E-23 T 25-04-2016 IPR011053 Single hybrid motif SMA_RS04095 6cb1a27526c226119dd46c81f3e7f99c 464 Gene3D G3DSA:4.10.320.10 118 161 2.8E-20 T 25-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 SMA_RS04095 6cb1a27526c226119dd46c81f3e7f99c 464 Gene3D G3DSA:4.10.320.10 162 207 4.4E-15 T 25-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 SMA_RS04095 6cb1a27526c226119dd46c81f3e7f99c 464 PANTHER PTHR23151 232 463 9.5E-142 T 25-04-2016 SMA_RS04095 6cb1a27526c226119dd46c81f3e7f99c 464 PANTHER PTHR23151 4 182 9.5E-142 T 25-04-2016 SMA_RS04095 6cb1a27526c226119dd46c81f3e7f99c 464 Pfam PF00364 Biotin-requiring enzyme 4 76 1.7E-19 T 25-04-2016 IPR000089 Biotin/lipoyl attachment SMA_RS04095 6cb1a27526c226119dd46c81f3e7f99c 464 SUPERFAMILY SSF47005 119 161 5.75E-13 T 25-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 SMA_RS04095 6cb1a27526c226119dd46c81f3e7f99c 464 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 25-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site SMA_RS06410 dfca6e666ed223a8b34f7186627dcbd4 421 Pfam PF00534 Glycosyl transferases group 1 192 342 9.0E-26 T 25-04-2016 IPR001296 Glycosyl transferase, family 1 SMA_RS06410 dfca6e666ed223a8b34f7186627dcbd4 421 Pfam PF13439 Glycosyltransferase Family 4 15 171 4.3E-7 T 25-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain SMA_RS06410 dfca6e666ed223a8b34f7186627dcbd4 421 SUPERFAMILY SSF53756 3 370 3.93E-44 T 25-04-2016 SMA_RS06410 dfca6e666ed223a8b34f7186627dcbd4 421 PANTHER PTHR12526:SF397 111 408 1.2E-20 T 25-04-2016 SMA_RS06410 dfca6e666ed223a8b34f7186627dcbd4 421 PANTHER PTHR12526 111 408 1.2E-20 T 25-04-2016 SMA_RS06410 dfca6e666ed223a8b34f7186627dcbd4 421 Gene3D G3DSA:3.40.50.2000 194 341 1.1E-9 T 25-04-2016 SMA_RS05650 5ad551f667785fb0a89d3a382a0ae3de 288 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 77 88 - T 25-04-2016 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 SMA_RS05650 5ad551f667785fb0a89d3a382a0ae3de 288 PRINTS PR00958 Homoserine kinase signature 8 23 1.6E-39 T 25-04-2016 SMA_RS05650 5ad551f667785fb0a89d3a382a0ae3de 288 PRINTS PR00958 Homoserine kinase signature 118 131 1.6E-39 T 25-04-2016 SMA_RS05650 5ad551f667785fb0a89d3a382a0ae3de 288 PRINTS PR00958 Homoserine kinase signature 84 99 1.6E-39 T 25-04-2016 SMA_RS05650 5ad551f667785fb0a89d3a382a0ae3de 288 PRINTS PR00958 Homoserine kinase signature 156 173 1.6E-39 T 25-04-2016 SMA_RS05650 5ad551f667785fb0a89d3a382a0ae3de 288 PRINTS PR00958 Homoserine kinase signature 236 251 1.6E-39 T 25-04-2016 SMA_RS05650 5ad551f667785fb0a89d3a382a0ae3de 288 Pfam PF00288 GHMP kinases N terminal domain 70 131 2.7E-13 T 25-04-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 SMA_RS05650 5ad551f667785fb0a89d3a382a0ae3de 288 TIGRFAM TIGR00191 thrB: homoserine kinase 1 287 9.9E-72 T 25-04-2016 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702|UniPathway: UPA00050 SMA_RS05650 5ad551f667785fb0a89d3a382a0ae3de 288 PANTHER PTHR20861 1 286 9.3E-83 T 25-04-2016 SMA_RS05650 5ad551f667785fb0a89d3a382a0ae3de 288 Hamap MF_00384 Homoserine kinase [thrB]. 1 285 31.707 T 25-04-2016 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702|UniPathway: UPA00050 SMA_RS05650 5ad551f667785fb0a89d3a382a0ae3de 288 PIRSF PIRSF000676 1 288 4.1E-84 T 25-04-2016 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702|UniPathway: UPA00050 SMA_RS05650 5ad551f667785fb0a89d3a382a0ae3de 288 SUPERFAMILY SSF55060 153 266 3.36E-31 T 25-04-2016 IPR013750 GHMP kinase, C-terminal domain SMA_RS05650 5ad551f667785fb0a89d3a382a0ae3de 288 Pfam PF08544 GHMP kinases C terminal 191 264 9.6E-8 T 25-04-2016 IPR013750 GHMP kinase, C-terminal domain SMA_RS05650 5ad551f667785fb0a89d3a382a0ae3de 288 PANTHER PTHR20861:SF1 1 286 9.3E-83 T 25-04-2016 SMA_RS05650 5ad551f667785fb0a89d3a382a0ae3de 288 Gene3D G3DSA:3.30.70.890 149 281 2.1E-37 T 25-04-2016 IPR013750 GHMP kinase, C-terminal domain SMA_RS05650 5ad551f667785fb0a89d3a382a0ae3de 288 SUPERFAMILY SSF54211 1 142 8.35E-29 T 25-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SMA_RS05650 5ad551f667785fb0a89d3a382a0ae3de 288 Gene3D G3DSA:3.30.230.10 1 142 2.5E-43 T 25-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SMA_RS10230 56819fe9440106bedf9f579a9544b6af 582 Hamap MF_00044 Aspartate--tRNA(Asp) ligase [aspS]. 2 558 35.315 T 25-04-2016 SMA_RS10230 56819fe9440106bedf9f579a9544b6af 582 Pfam PF01336 OB-fold nucleic acid binding domain 20 103 1.0E-14 T 25-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 SMA_RS10230 56819fe9440106bedf9f579a9544b6af 582 SUPERFAMILY SSF55681 114 295 6.89E-107 T 25-04-2016 SMA_RS10230 56819fe9440106bedf9f579a9544b6af 582 SUPERFAMILY SSF55681 419 578 6.89E-107 T 25-04-2016 SMA_RS10230 56819fe9440106bedf9f579a9544b6af 582 Gene3D G3DSA:3.30.1360.30 280 408 2.2E-49 T 25-04-2016 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 SMA_RS10230 56819fe9440106bedf9f579a9544b6af 582 SUPERFAMILY SSF50249 2 110 5.71E-30 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMA_RS10230 56819fe9440106bedf9f579a9544b6af 582 PANTHER PTHR22594:SF5 365 566 3.4E-247 T 25-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 SMA_RS10230 56819fe9440106bedf9f579a9544b6af 582 PANTHER PTHR22594:SF5 1 300 3.4E-247 T 25-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 SMA_RS10230 56819fe9440106bedf9f579a9544b6af 582 Pfam PF02938 GAD domain 312 400 2.8E-25 T 25-04-2016 IPR029351 GAD domain SMA_RS10230 56819fe9440106bedf9f579a9544b6af 582 PRINTS PR01042 Aspartyl-tRNA synthetase signature 469 485 7.4E-24 T 25-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SMA_RS10230 56819fe9440106bedf9f579a9544b6af 582 PRINTS PR01042 Aspartyl-tRNA synthetase signature 210 223 7.4E-24 T 25-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SMA_RS10230 56819fe9440106bedf9f579a9544b6af 582 PRINTS PR01042 Aspartyl-tRNA synthetase signature 193 205 7.4E-24 T 25-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SMA_RS10230 56819fe9440106bedf9f579a9544b6af 582 PRINTS PR01042 Aspartyl-tRNA synthetase signature 513 527 7.4E-24 T 25-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SMA_RS10230 56819fe9440106bedf9f579a9544b6af 582 Gene3D G3DSA:2.40.50.140 1 108 1.1E-37 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMA_RS10230 56819fe9440106bedf9f579a9544b6af 582 SUPERFAMILY SSF55261 292 413 1.8E-37 T 25-04-2016 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 SMA_RS10230 56819fe9440106bedf9f579a9544b6af 582 Gene3D G3DSA:3.30.930.10 409 579 1.3E-111 T 25-04-2016 SMA_RS10230 56819fe9440106bedf9f579a9544b6af 582 Gene3D G3DSA:3.30.930.10 134 279 1.3E-111 T 25-04-2016 SMA_RS10230 56819fe9440106bedf9f579a9544b6af 582 PANTHER PTHR22594 365 566 3.4E-247 T 25-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SMA_RS10230 56819fe9440106bedf9f579a9544b6af 582 PANTHER PTHR22594 1 300 3.4E-247 T 25-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SMA_RS10230 56819fe9440106bedf9f579a9544b6af 582 Pfam PF00152 tRNA synthetases class II (D, K and N) 121 552 2.0E-106 T 25-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SMA_RS10230 56819fe9440106bedf9f579a9544b6af 582 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 1 577 8.4E-235 T 25-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 SMA_RS03955 5c81b99acf6468958aba274ed3affe7b 160 SUPERFAMILY SSF55811 4 146 8.39E-28 T 25-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SMA_RS03955 5c81b99acf6468958aba274ed3affe7b 160 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 25-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 SMA_RS03955 5c81b99acf6468958aba274ed3affe7b 160 PANTHER PTHR22769:SF39 3 156 2.7E-47 T 25-04-2016 SMA_RS03955 5c81b99acf6468958aba274ed3affe7b 160 Pfam PF00293 NUDIX domain 4 130 1.2E-22 T 25-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 SMA_RS03955 5c81b99acf6468958aba274ed3affe7b 160 Gene3D G3DSA:3.90.79.10 3 159 2.0E-37 T 25-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SMA_RS03955 5c81b99acf6468958aba274ed3affe7b 160 PANTHER PTHR22769 3 156 2.7E-47 T 25-04-2016 SMA_RS03955 5c81b99acf6468958aba274ed3affe7b 160 PRINTS PR01402 Mutator MutX protein signature 68 94 1.1E-57 T 25-04-2016 IPR003562 Mutator MutX protein GO:0006281|GO:0008413 MetaCyc: PWY-6502 SMA_RS03955 5c81b99acf6468958aba274ed3affe7b 160 PRINTS PR01402 Mutator MutX protein signature 101 121 1.1E-57 T 25-04-2016 IPR003562 Mutator MutX protein GO:0006281|GO:0008413 MetaCyc: PWY-6502 SMA_RS03955 5c81b99acf6468958aba274ed3affe7b 160 PRINTS PR01402 Mutator MutX protein signature 138 158 1.1E-57 T 25-04-2016 IPR003562 Mutator MutX protein GO:0006281|GO:0008413 MetaCyc: PWY-6502 SMA_RS03955 5c81b99acf6468958aba274ed3affe7b 160 PRINTS PR01402 Mutator MutX protein signature 121 138 1.1E-57 T 25-04-2016 IPR003562 Mutator MutX protein GO:0006281|GO:0008413 MetaCyc: PWY-6502 SMA_RS03955 5c81b99acf6468958aba274ed3affe7b 160 PRINTS PR01402 Mutator MutX protein signature 4 22 1.1E-57 T 25-04-2016 IPR003562 Mutator MutX protein GO:0006281|GO:0008413 MetaCyc: PWY-6502 SMA_RS03955 5c81b99acf6468958aba274ed3affe7b 160 PRINTS PR01402 Mutator MutX protein signature 22 37 1.1E-57 T 25-04-2016 IPR003562 Mutator MutX protein GO:0006281|GO:0008413 MetaCyc: PWY-6502 SMA_RS09855 c0c69db3afa2e53e1564311b3802fef4 164 SMART SM00947 24 164 1.4E-36 T 25-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 SMA_RS09855 c0c69db3afa2e53e1564311b3802fef4 164 PANTHER PTHR11002:SF9 1 163 1.4E-59 T 25-04-2016 SMA_RS09855 c0c69db3afa2e53e1564311b3802fef4 164 Pfam PF00484 Carbonic anhydrase 32 159 2.3E-14 T 25-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 SMA_RS09855 c0c69db3afa2e53e1564311b3802fef4 164 PANTHER PTHR11002 1 163 1.4E-59 T 25-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 SMA_RS09855 c0c69db3afa2e53e1564311b3802fef4 164 SUPERFAMILY SSF53056 4 163 2.62E-43 T 25-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 SMA_RS09855 c0c69db3afa2e53e1564311b3802fef4 164 Gene3D G3DSA:3.40.1050.10 3 163 5.7E-43 T 25-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 SMA_RS07870 c268afce1dd7d738a038684c53ec44bc 229 PIRSF PIRSF002155 1 227 1.6E-76 T 25-04-2016 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 SMA_RS07870 c268afce1dd7d738a038684c53ec44bc 229 PANTHER PTHR23105:SF5 21 229 1.3E-76 T 25-04-2016 SMA_RS07870 c268afce1dd7d738a038684c53ec44bc 229 Gene3D G3DSA:3.40.50.790 69 159 5.4E-44 T 25-04-2016 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich SMA_RS07870 c268afce1dd7d738a038684c53ec44bc 229 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 227 5.8E-101 T 25-04-2016 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 SMA_RS07870 c268afce1dd7d738a038684c53ec44bc 229 SUPERFAMILY SSF56808 6 226 1.01E-81 T 25-04-2016 IPR023674 Ribosomal protein L1-like SMA_RS07870 c268afce1dd7d738a038684c53ec44bc 229 PANTHER PTHR23105 21 229 1.3E-76 T 25-04-2016 SMA_RS07870 c268afce1dd7d738a038684c53ec44bc 229 ProSitePatterns PS01199 Ribosomal protein L1 signature. 120 139 - T 25-04-2016 IPR023673 Ribosomal protein L1, conserved site SMA_RS07870 c268afce1dd7d738a038684c53ec44bc 229 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 229 43.089 T 25-04-2016 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 SMA_RS07870 c268afce1dd7d738a038684c53ec44bc 229 Pfam PF00687 Ribosomal protein L1p/L10e family 32 220 2.0E-51 T 25-04-2016 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein SMA_RS07870 c268afce1dd7d738a038684c53ec44bc 229 Gene3D G3DSA:3.30.190.20 17 68 4.6E-42 T 25-04-2016 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 SMA_RS07870 c268afce1dd7d738a038684c53ec44bc 229 Gene3D G3DSA:3.30.190.20 161 226 4.6E-42 T 25-04-2016 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 SMA_RS09895 e0e3ddbdb4b632e4087be6216b577286 223 SUPERFAMILY SSF144091 6 191 4.97E-37 T 25-04-2016 SMA_RS09895 e0e3ddbdb4b632e4087be6216b577286 223 PANTHER PTHR22936 10 222 1.2E-34 T 25-04-2016 IPR002610 Peptidase S54, rhomboid GO:0004252|GO:0006508|GO:0016021 SMA_RS09895 e0e3ddbdb4b632e4087be6216b577286 223 Pfam PF01694 Rhomboid family 53 189 8.5E-31 T 25-04-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 SMA_RS09895 e0e3ddbdb4b632e4087be6216b577286 223 Gene3D G3DSA:1.20.1540.10 7 189 1.2E-36 T 25-04-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 SMA_RS06780 5138cff0ef67d04431395b88024a80cc 453 Gene3D G3DSA:1.10.287.130 219 288 7.3E-9 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMA_RS06780 5138cff0ef67d04431395b88024a80cc 453 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 345 451 8.4E-11 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMA_RS06780 5138cff0ef67d04431395b88024a80cc 453 Gene3D G3DSA:3.30.565.10 315 452 1.8E-18 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMA_RS06780 5138cff0ef67d04431395b88024a80cc 453 SUPERFAMILY SSF47384 210 293 1.22E-14 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMA_RS06780 5138cff0ef67d04431395b88024a80cc 453 PRINTS PR00344 Bacterial sensor protein C-terminal signature 378 392 3.45E-6 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMA_RS06780 5138cff0ef67d04431395b88024a80cc 453 PRINTS PR00344 Bacterial sensor protein C-terminal signature 413 431 3.45E-6 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMA_RS06780 5138cff0ef67d04431395b88024a80cc 453 PANTHER PTHR24423 206 441 4.0E-29 T 25-04-2016 SMA_RS06780 5138cff0ef67d04431395b88024a80cc 453 PANTHER PTHR24423 13 24 4.0E-29 T 25-04-2016 SMA_RS06780 5138cff0ef67d04431395b88024a80cc 453 SMART SM00387 340 453 3.6E-14 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMA_RS06780 5138cff0ef67d04431395b88024a80cc 453 Pfam PF00512 His Kinase A (phospho-acceptor) domain 228 292 2.9E-9 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMA_RS06780 5138cff0ef67d04431395b88024a80cc 453 SUPERFAMILY SSF55874 281 451 3.39E-21 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMA_RS06780 5138cff0ef67d04431395b88024a80cc 453 SMART SM00388 227 292 6.3E-10 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMA_RS07645 c732dc8ea31ce0b79e532dcc8488ad26 236 Gene3D G3DSA:3.40.50.2300 2 121 2.0E-41 T 25-04-2016 SMA_RS07645 c732dc8ea31ce0b79e532dcc8488ad26 236 PANTHER PTHR26402:SF614 2 233 1.1E-104 T 25-04-2016 SMA_RS07645 c732dc8ea31ce0b79e532dcc8488ad26 236 SMART SM00862 156 232 1.3E-26 T 25-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SMA_RS07645 c732dc8ea31ce0b79e532dcc8488ad26 236 PANTHER PTHR26402 2 233 1.1E-104 T 25-04-2016 SMA_RS07645 c732dc8ea31ce0b79e532dcc8488ad26 236 SMART SM00448 2 112 4.0E-46 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMA_RS07645 c732dc8ea31ce0b79e532dcc8488ad26 236 SUPERFAMILY SSF46894 131 232 1.74E-30 T 25-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SMA_RS07645 c732dc8ea31ce0b79e532dcc8488ad26 236 SUPERFAMILY SSF52172 1 124 7.12E-42 T 25-04-2016 IPR011006 CheY-like superfamily SMA_RS07645 c732dc8ea31ce0b79e532dcc8488ad26 236 Pfam PF00072 Response regulator receiver domain 4 113 3.0E-29 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMA_RS07645 c732dc8ea31ce0b79e532dcc8488ad26 236 Pfam PF00486 Transcriptional regulatory protein, C terminal 156 231 1.5E-27 T 25-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SMA_RS07645 c732dc8ea31ce0b79e532dcc8488ad26 236 Gene3D G3DSA:1.10.10.10 134 233 5.6E-34 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMA_RS04840 17e07ba6f8985481fd06273aece4192b 61 Pfam PF01361 Tautomerase enzyme 2 60 4.0E-23 T 25-04-2016 IPR004370 4-oxalocrotonate tautomerase GO:0006725|GO:0016853 SMA_RS04840 17e07ba6f8985481fd06273aece4192b 61 PANTHER PTHR35530 1 57 1.5E-13 T 25-04-2016 SMA_RS04840 17e07ba6f8985481fd06273aece4192b 61 Gene3D G3DSA:3.30.429.20 1 58 5.7E-21 T 25-04-2016 SMA_RS04840 17e07ba6f8985481fd06273aece4192b 61 SUPERFAMILY SSF55331 2 58 1.23E-16 T 25-04-2016 IPR014347 Tautomerase/MIF superfamily SMA_RS02875 ceb105442731e53a6a5479f0465070a2 581 Gene3D G3DSA:1.20.1560.10 11 322 1.8E-70 T 25-04-2016 SMA_RS02875 ceb105442731e53a6a5479f0465070a2 581 Gene3D G3DSA:3.40.50.300 341 571 4.4E-79 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS02875 ceb105442731e53a6a5479f0465070a2 581 SUPERFAMILY SSF90123 12 322 1.7E-67 T 25-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SMA_RS02875 ceb105442731e53a6a5479f0465070a2 581 SMART SM00382 366 557 9.8E-12 T 25-04-2016 IPR003593 AAA+ ATPase domain SMA_RS02875 ceb105442731e53a6a5479f0465070a2 581 Pfam PF00664 ABC transporter transmembrane region 27 295 1.1E-34 T 25-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SMA_RS02875 ceb105442731e53a6a5479f0465070a2 581 PANTHER PTHR24221 9 581 2.1E-231 T 25-04-2016 SMA_RS02875 ceb105442731e53a6a5479f0465070a2 581 Pfam PF00005 ABC transporter 357 505 2.8E-33 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMA_RS02875 ceb105442731e53a6a5479f0465070a2 581 PANTHER PTHR24221:SF258 9 581 2.1E-231 T 25-04-2016 SMA_RS02875 ceb105442731e53a6a5479f0465070a2 581 SUPERFAMILY SSF52540 335 575 1.38E-86 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS08475 3fd5709d50aa41cc4b9f0cf9a3d04066 178 PANTHER PTHR41303:SF1 2 178 4.1E-37 T 25-04-2016 SMA_RS08475 3fd5709d50aa41cc4b9f0cf9a3d04066 178 PANTHER PTHR41303 2 178 4.1E-37 T 25-04-2016 SMA_RS08475 3fd5709d50aa41cc4b9f0cf9a3d04066 178 Pfam PF02620 Uncharacterized ACR, COG1399 55 175 7.3E-21 T 25-04-2016 IPR003772 Protein of unknown function DUF177 SMA_RS07205 6cef9cfecc848de7d257827bd669bd3a 425 Gene3D G3DSA:3.40.50.1980 221 369 3.7E-68 T 25-04-2016 SMA_RS07205 6cef9cfecc848de7d257827bd669bd3a 425 PIRSF PIRSF000099 3 425 2.1E-168 T 25-04-2016 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 SMA_RS07205 6cef9cfecc848de7d257827bd669bd3a 425 Pfam PF00815 Histidinol dehydrogenase 25 423 1.1E-168 T 25-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 SMA_RS07205 6cef9cfecc848de7d257827bd669bd3a 425 PRINTS PR00083 Histidinol dehydrogenase signature 248 267 5.3E-92 T 25-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 SMA_RS07205 6cef9cfecc848de7d257827bd669bd3a 425 PRINTS PR00083 Histidinol dehydrogenase signature 358 376 5.3E-92 T 25-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 SMA_RS07205 6cef9cfecc848de7d257827bd669bd3a 425 PRINTS PR00083 Histidinol dehydrogenase signature 197 222 5.3E-92 T 25-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 SMA_RS07205 6cef9cfecc848de7d257827bd669bd3a 425 PRINTS PR00083 Histidinol dehydrogenase signature 317 342 5.3E-92 T 25-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 SMA_RS07205 6cef9cfecc848de7d257827bd669bd3a 425 PRINTS PR00083 Histidinol dehydrogenase signature 167 193 5.3E-92 T 25-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 SMA_RS07205 6cef9cfecc848de7d257827bd669bd3a 425 PRINTS PR00083 Histidinol dehydrogenase signature 226 247 5.3E-92 T 25-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 SMA_RS07205 6cef9cfecc848de7d257827bd669bd3a 425 PRINTS PR00083 Histidinol dehydrogenase signature 134 160 5.3E-92 T 25-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 SMA_RS07205 6cef9cfecc848de7d257827bd669bd3a 425 PRINTS PR00083 Histidinol dehydrogenase signature 33 57 5.3E-92 T 25-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 SMA_RS07205 6cef9cfecc848de7d257827bd669bd3a 425 SUPERFAMILY SSF53720 29 424 3.14E-84 T 25-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 SMA_RS07205 6cef9cfecc848de7d257827bd669bd3a 425 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 226 258 - T 25-04-2016 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 SMA_RS07205 6cef9cfecc848de7d257827bd669bd3a 425 Gene3D G3DSA:3.40.50.1980 28 220 4.9E-84 T 25-04-2016 SMA_RS07205 6cef9cfecc848de7d257827bd669bd3a 425 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 33 423 9.4E-167 T 25-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 SMA_RS07205 6cef9cfecc848de7d257827bd669bd3a 425 PANTHER PTHR21256 28 425 2.9E-201 T 25-04-2016 SMA_RS07205 6cef9cfecc848de7d257827bd669bd3a 425 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 2 424 42.959 T 25-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 SMA_RS03695 f5e181ec16632b4388fc0d0fe0a1309a 427 SUPERFAMILY SSF54631 185 304 3.29E-20 T 25-04-2016 SMA_RS03695 f5e181ec16632b4388fc0d0fe0a1309a 427 SUPERFAMILY SSF46785 4 60 3.23E-6 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMA_RS03695 f5e181ec16632b4388fc0d0fe0a1309a 427 Gene3D G3DSA:3.40.1390.20 67 189 1.7E-45 T 25-04-2016 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like SMA_RS03695 f5e181ec16632b4388fc0d0fe0a1309a 427 Pfam PF07085 DRTGG domain 75 177 6.5E-32 T 25-04-2016 IPR010766 DRTGG KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 SMA_RS03695 f5e181ec16632b4388fc0d0fe0a1309a 427 Gene3D G3DSA:1.10.10.10 13 58 1.7E-8 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMA_RS03695 f5e181ec16632b4388fc0d0fe0a1309a 427 SUPERFAMILY SSF54637 331 423 9.87E-6 T 25-04-2016 IPR029069 HotDog domain SMA_RS03695 f5e181ec16632b4388fc0d0fe0a1309a 427 Gene3D G3DSA:3.10.580.10 190 306 4.7E-20 T 25-04-2016 SMA_RS03695 f5e181ec16632b4388fc0d0fe0a1309a 427 Gene3D G3DSA:3.10.129.10 330 420 3.6E-4 T 25-04-2016 IPR029069 HotDog domain SMA_RS03695 f5e181ec16632b4388fc0d0fe0a1309a 427 PANTHER PTHR11911 202 299 1.7E-13 T 25-04-2016 SMA_RS03695 f5e181ec16632b4388fc0d0fe0a1309a 427 Pfam PF00571 CBS domain 199 244 1.7E-4 T 25-04-2016 IPR000644 CBS domain SMA_RS03695 f5e181ec16632b4388fc0d0fe0a1309a 427 Pfam PF00571 CBS domain 251 305 2.1E-5 T 25-04-2016 IPR000644 CBS domain SMA_RS03695 f5e181ec16632b4388fc0d0fe0a1309a 427 SMART SM00116 199 247 16.0 T 25-04-2016 IPR000644 CBS domain SMA_RS03695 f5e181ec16632b4388fc0d0fe0a1309a 427 SMART SM00116 258 306 0.46 T 25-04-2016 IPR000644 CBS domain SMA_RS03695 f5e181ec16632b4388fc0d0fe0a1309a 427 SUPERFAMILY SSF75138 71 183 3.14E-31 T 25-04-2016 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like SMA_RS03695 f5e181ec16632b4388fc0d0fe0a1309a 427 Pfam PF00392 Bacterial regulatory proteins, gntR family 13 58 9.9E-5 T 25-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SMA_RS03930 361b9bd066a59b6e5e1e370b836f4902 367 Pfam PF01266 FAD dependent oxidoreductase 3 341 1.1E-41 T 25-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 SMA_RS03930 361b9bd066a59b6e5e1e370b836f4902 367 PANTHER PTHR13847:SF211 4 362 7.5E-109 T 25-04-2016 SMA_RS03930 361b9bd066a59b6e5e1e370b836f4902 367 SUPERFAMILY SSF54373 213 303 1.2E-8 T 25-04-2016 SMA_RS03930 361b9bd066a59b6e5e1e370b836f4902 367 Gene3D G3DSA:3.50.50.60 1 80 4.8E-32 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMA_RS03930 361b9bd066a59b6e5e1e370b836f4902 367 Gene3D G3DSA:3.50.50.60 304 348 4.8E-32 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMA_RS03930 361b9bd066a59b6e5e1e370b836f4902 367 Gene3D G3DSA:3.50.50.60 141 199 4.8E-32 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMA_RS03930 361b9bd066a59b6e5e1e370b836f4902 367 SUPERFAMILY SSF51905 1 213 1.55E-26 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMA_RS03930 361b9bd066a59b6e5e1e370b836f4902 367 SUPERFAMILY SSF51905 304 359 1.55E-26 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMA_RS03930 361b9bd066a59b6e5e1e370b836f4902 367 Gene3D G3DSA:3.30.9.10 200 303 2.4E-13 T 25-04-2016 SMA_RS03930 361b9bd066a59b6e5e1e370b836f4902 367 PANTHER PTHR13847 4 362 7.5E-109 T 25-04-2016 SMA_RS03820 af9a1435a2e78569534d4fc53b1eafe5 801 Gene3D G3DSA:3.50.40.10 228 399 2.5E-77 T 25-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 SMA_RS03820 af9a1435a2e78569534d4fc53b1eafe5 801 SMART SM00874 408 476 9.2E-24 T 25-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 SMA_RS03820 af9a1435a2e78569534d4fc53b1eafe5 801 SUPERFAMILY SSF46955 410 480 5.77E-18 T 25-04-2016 IPR009061 Putative DNA-binding domain SMA_RS03820 af9a1435a2e78569534d4fc53b1eafe5 801 SUPERFAMILY SSF54991 704 801 9.68E-30 T 25-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 SMA_RS03820 af9a1435a2e78569534d4fc53b1eafe5 801 Gene3D G3DSA:3.30.930.10 493 694 8.8E-64 T 25-04-2016 SMA_RS03820 af9a1435a2e78569534d4fc53b1eafe5 801 Pfam PF03147 Ferredoxin-fold anticodon binding domain 709 801 2.2E-27 T 25-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 SMA_RS03820 af9a1435a2e78569534d4fc53b1eafe5 801 SUPERFAMILY SSF50249 37 196 1.09E-43 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMA_RS03820 af9a1435a2e78569534d4fc53b1eafe5 801 SMART SM00873 218 391 1.2E-85 T 25-04-2016 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 SMA_RS03820 af9a1435a2e78569534d4fc53b1eafe5 801 SUPERFAMILY SSF56037 213 400 6.54E-67 T 25-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 SMA_RS03820 af9a1435a2e78569534d4fc53b1eafe5 801 Gene3D G3DSA:3.30.70.380 710 801 1.5E-29 T 25-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 SMA_RS03820 af9a1435a2e78569534d4fc53b1eafe5 801 Gene3D G3DSA:3.30.56.20 408 480 3.4E-23 T 25-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 SMA_RS03820 af9a1435a2e78569534d4fc53b1eafe5 801 Pfam PF01588 Putative tRNA binding domain 45 150 2.5E-19 T 25-04-2016 IPR002547 tRNA-binding domain GO:0000049 Reactome: REACT_71 SMA_RS03820 af9a1435a2e78569534d4fc53b1eafe5 801 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 801 2.2E-261 T 25-04-2016 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 SMA_RS03820 af9a1435a2e78569534d4fc53b1eafe5 801 Pfam PF03483 B3/4 domain 222 390 6.0E-65 T 25-04-2016 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 SMA_RS03820 af9a1435a2e78569534d4fc53b1eafe5 801 PANTHER PTHR10947 2 801 1.2E-288 T 25-04-2016 SMA_RS03820 af9a1435a2e78569534d4fc53b1eafe5 801 Gene3D G3DSA:3.30.56.10 1 38 3.8E-24 T 25-04-2016 SMA_RS03820 af9a1435a2e78569534d4fc53b1eafe5 801 PANTHER PTHR10947:SF0 2 801 1.2E-288 T 25-04-2016 SMA_RS03820 af9a1435a2e78569534d4fc53b1eafe5 801 Gene3D G3DSA:2.40.50.140 41 227 1.9E-50 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMA_RS03820 af9a1435a2e78569534d4fc53b1eafe5 801 SMART SM00896 708 801 3.7E-40 T 25-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 SMA_RS03820 af9a1435a2e78569534d4fc53b1eafe5 801 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 795 45.967 T 25-04-2016 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 SMA_RS03820 af9a1435a2e78569534d4fc53b1eafe5 801 Pfam PF03484 tRNA synthetase B5 domain 411 476 1.7E-15 T 25-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 SMA_RS03820 af9a1435a2e78569534d4fc53b1eafe5 801 SUPERFAMILY SSF55681 472 694 6.96E-50 T 25-04-2016 SMA_RS07385 1415a6c99a0b7dadf44ffe1696ca146b 433 PANTHER PTHR11373 1 329 2.5E-89 T 25-04-2016 SMA_RS07385 1415a6c99a0b7dadf44ffe1696ca146b 433 SMART SM00471 49 181 4.2E-12 T 25-04-2016 IPR003607 HD/PDEase domain SMA_RS07385 1415a6c99a0b7dadf44ffe1696ca146b 433 Pfam PF01966 HD domain 53 174 1.7E-12 T 25-04-2016 IPR006674 HD domain SMA_RS07385 1415a6c99a0b7dadf44ffe1696ca146b 433 Gene3D G3DSA:1.10.3210.10 2 254 1.4E-83 T 25-04-2016 IPR006674 HD domain SMA_RS07385 1415a6c99a0b7dadf44ffe1696ca146b 433 SUPERFAMILY SSF109604 2 427 2.97E-123 T 25-04-2016 SMA_RS06365 f2ed1069f457f73d2c339d04fb5e12f6 176 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 87 171 5.6E-35 T 25-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 SMA_RS06365 f2ed1069f457f73d2c339d04fb5e12f6 176 PANTHER PTHR10938 4 172 1.8E-62 T 25-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 SMA_RS06365 f2ed1069f457f73d2c339d04fb5e12f6 176 SUPERFAMILY SSF55200 86 174 3.66E-31 T 25-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 SMA_RS06365 f2ed1069f457f73d2c339d04fb5e12f6 176 Gene3D G3DSA:3.30.110.10 83 175 1.5E-35 T 25-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 SMA_RS06365 f2ed1069f457f73d2c339d04fb5e12f6 176 ProSitePatterns PS00938 Initiation factor 3 signature. 62 75 - T 25-04-2016 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 SMA_RS06365 f2ed1069f457f73d2c339d04fb5e12f6 176 SUPERFAMILY SSF54364 9 82 2.88E-27 T 25-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 SMA_RS06365 f2ed1069f457f73d2c339d04fb5e12f6 176 Gene3D G3DSA:3.10.20.80 6 82 1.1E-32 T 25-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 SMA_RS06365 f2ed1069f457f73d2c339d04fb5e12f6 176 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 5 174 29.36 T 25-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 SMA_RS06365 f2ed1069f457f73d2c339d04fb5e12f6 176 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 11 171 4.0E-63 T 25-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 SMA_RS06365 f2ed1069f457f73d2c339d04fb5e12f6 176 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 11 80 4.0E-28 T 25-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 SMA_RS05220 207848ec7feae700df87d1032b6f3901 818 Gene3D G3DSA:3.30.1360.40 234 330 3.2E-35 T 25-04-2016 IPR024946 Arginine repressor C-terminal-like domain SMA_RS05220 207848ec7feae700df87d1032b6f3901 818 SUPERFAMILY SSF101904 497 814 3.14E-106 T 25-04-2016 SMA_RS05220 207848ec7feae700df87d1032b6f3901 818 PANTHER PTHR10169 2 774 0.0 T 25-04-2016 SMA_RS05220 207848ec7feae700df87d1032b6f3901 818 Gene3D G3DSA:3.90.199.10 331 396 4.2E-121 T 25-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 SMA_RS05220 207848ec7feae700df87d1032b6f3901 818 Gene3D G3DSA:3.90.199.10 29 233 4.2E-121 T 25-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 SMA_RS05220 207848ec7feae700df87d1032b6f3901 818 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 758 804 2.5E-10 T 25-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 SMA_RS05220 207848ec7feae700df87d1032b6f3901 818 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 657 703 7.8E-14 T 25-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 SMA_RS05220 207848ec7feae700df87d1032b6f3901 818 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 610 654 1.2E-11 T 25-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 SMA_RS05220 207848ec7feae700df87d1032b6f3901 818 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 552 599 7.0E-11 T 25-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 SMA_RS05220 207848ec7feae700df87d1032b6f3901 818 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 502 547 8.7E-10 T 25-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 SMA_RS05220 207848ec7feae700df87d1032b6f3901 818 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 707 755 7.4E-13 T 25-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 SMA_RS05220 207848ec7feae700df87d1032b6f3901 818 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 1 809 29.097 T 25-04-2016 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 SMA_RS05220 207848ec7feae700df87d1032b6f3901 818 PANTHER PTHR10169:SF48 2 774 0.0 T 25-04-2016 SMA_RS05220 207848ec7feae700df87d1032b6f3901 818 SUPERFAMILY SSF56719 29 484 9.29E-176 T 25-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 SMA_RS05220 207848ec7feae700df87d1032b6f3901 818 Gene3D G3DSA:2.120.10.90 494 804 6.0E-120 T 25-04-2016 SMA_RS05220 207848ec7feae700df87d1032b6f3901 818 SMART SM00434 9 462 5.5E-285 T 25-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 SMA_RS05220 207848ec7feae700df87d1032b6f3901 818 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 7 804 0.0 T 25-04-2016 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 SMA_RS05220 207848ec7feae700df87d1032b6f3901 818 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 30 469 5.3E-157 T 25-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 SMA_RS01750 27322c75209ccfec4bbda1dae39575d9 705 ProSitePatterns PS01047 Heavy-metal-associated domain. 12 41 - T 25-04-2016 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 SMA_RS01750 27322c75209ccfec4bbda1dae39575d9 705 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 168 681 4.9E-91 T 25-04-2016 IPR001757 P-type ATPase GO:0016021 SMA_RS01750 27322c75209ccfec4bbda1dae39575d9 705 Gene3D G3DSA:3.40.50.1000 370 409 4.7E-45 T 25-04-2016 IPR023214 HAD-like domain SMA_RS01750 27322c75209ccfec4bbda1dae39575d9 705 Gene3D G3DSA:3.40.50.1000 525 667 4.7E-45 T 25-04-2016 IPR023214 HAD-like domain SMA_RS01750 27322c75209ccfec4bbda1dae39575d9 705 PRINTS PR00941 Cadmium-transporting ATPase signature 109 126 8.05E-84 T 25-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 SMA_RS01750 27322c75209ccfec4bbda1dae39575d9 705 PRINTS PR00941 Cadmium-transporting ATPase signature 10 19 8.05E-84 T 25-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 SMA_RS01750 27322c75209ccfec4bbda1dae39575d9 705 PRINTS PR00941 Cadmium-transporting ATPase signature 261 277 8.05E-84 T 25-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 SMA_RS01750 27322c75209ccfec4bbda1dae39575d9 705 PRINTS PR00941 Cadmium-transporting ATPase signature 21 42 8.05E-84 T 25-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 SMA_RS01750 27322c75209ccfec4bbda1dae39575d9 705 PRINTS PR00941 Cadmium-transporting ATPase signature 200 216 8.05E-84 T 25-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 SMA_RS01750 27322c75209ccfec4bbda1dae39575d9 705 PRINTS PR00941 Cadmium-transporting ATPase signature 126 138 8.05E-84 T 25-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 SMA_RS01750 27322c75209ccfec4bbda1dae39575d9 705 PRINTS PR00941 Cadmium-transporting ATPase signature 280 294 8.05E-84 T 25-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 SMA_RS01750 27322c75209ccfec4bbda1dae39575d9 705 PRINTS PR00941 Cadmium-transporting ATPase signature 180 200 8.05E-84 T 25-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 SMA_RS01750 27322c75209ccfec4bbda1dae39575d9 705 PRINTS PR00941 Cadmium-transporting ATPase signature 43 66 8.05E-84 T 25-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 SMA_RS01750 27322c75209ccfec4bbda1dae39575d9 705 SUPERFAMILY SSF55008 3 60 4.32E-12 T 25-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 SMA_RS01750 27322c75209ccfec4bbda1dae39575d9 705 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 127 701 1.1E-120 T 25-04-2016 SMA_RS01750 27322c75209ccfec4bbda1dae39575d9 705 Gene3D G3DSA:2.70.150.10 190 296 2.7E-28 T 25-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 SMA_RS01750 27322c75209ccfec4bbda1dae39575d9 705 Pfam PF00403 Heavy-metal-associated domain 9 59 1.4E-12 T 25-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 SMA_RS01750 27322c75209ccfec4bbda1dae39575d9 705 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 146 448 1.8E-95 T 25-04-2016 SMA_RS01750 27322c75209ccfec4bbda1dae39575d9 705 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 398 404 - T 25-04-2016 IPR018303 P-type ATPase, phosphorylation site SMA_RS01750 27322c75209ccfec4bbda1dae39575d9 705 Gene3D G3DSA:3.40.1110.10 410 524 2.0E-17 T 25-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 SMA_RS01750 27322c75209ccfec4bbda1dae39575d9 705 SUPERFAMILY SSF81665 648 692 9.68E-21 T 25-04-2016 SMA_RS01750 27322c75209ccfec4bbda1dae39575d9 705 SUPERFAMILY SSF81665 296 390 9.68E-21 T 25-04-2016 SMA_RS01750 27322c75209ccfec4bbda1dae39575d9 705 SUPERFAMILY SSF81665 148 199 9.68E-21 T 25-04-2016 SMA_RS01750 27322c75209ccfec4bbda1dae39575d9 705 PANTHER PTHR24093:SF317 9 702 1.8E-302 T 25-04-2016 SMA_RS01750 27322c75209ccfec4bbda1dae39575d9 705 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 145 701 3.3E-183 T 25-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 SMA_RS01750 27322c75209ccfec4bbda1dae39575d9 705 Gene3D G3DSA:3.30.70.100 2 60 2.8E-13 T 25-04-2016 SMA_RS01750 27322c75209ccfec4bbda1dae39575d9 705 SUPERFAMILY SSF56784 395 414 1.04E-51 T 25-04-2016 IPR023214 HAD-like domain SMA_RS01750 27322c75209ccfec4bbda1dae39575d9 705 SUPERFAMILY SSF56784 455 698 1.04E-51 T 25-04-2016 IPR023214 HAD-like domain SMA_RS01750 27322c75209ccfec4bbda1dae39575d9 705 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 545 555 8.98E-24 T 25-04-2016 SMA_RS01750 27322c75209ccfec4bbda1dae39575d9 705 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 396 410 8.98E-24 T 25-04-2016 SMA_RS01750 27322c75209ccfec4bbda1dae39575d9 705 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 245 259 8.98E-24 T 25-04-2016 SMA_RS01750 27322c75209ccfec4bbda1dae39575d9 705 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 522 533 8.98E-24 T 25-04-2016 SMA_RS01750 27322c75209ccfec4bbda1dae39575d9 705 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 622 634 8.98E-24 T 25-04-2016 SMA_RS01750 27322c75209ccfec4bbda1dae39575d9 705 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 598 617 8.98E-24 T 25-04-2016 SMA_RS01750 27322c75209ccfec4bbda1dae39575d9 705 SUPERFAMILY SSF81653 198 295 1.96E-24 T 25-04-2016 SMA_RS01750 27322c75209ccfec4bbda1dae39575d9 705 Pfam PF00702 haloacid dehalogenase-like hydrolase 393 610 2.2E-41 T 25-04-2016 SMA_RS01750 27322c75209ccfec4bbda1dae39575d9 705 PANTHER PTHR24093 9 702 1.8E-302 T 25-04-2016 SMA_RS01750 27322c75209ccfec4bbda1dae39575d9 705 Pfam PF00122 E1-E2 ATPase 167 387 1.2E-63 T 25-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 SMA_RS00400 6cb95ce1059889fb7a9fcfb5bce55ccb 180 PANTHER PTHR11994 1 179 8.2E-95 T 25-04-2016 SMA_RS00400 6cb95ce1059889fb7a9fcfb5bce55ccb 180 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 2 180 43.815 T 25-04-2016 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS00400 6cb95ce1059889fb7a9fcfb5bce55ccb 180 SUPERFAMILY SSF55282 4 179 1.53E-75 T 25-04-2016 IPR022803 Ribosomal protein L5 domain SMA_RS00400 6cb95ce1059889fb7a9fcfb5bce55ccb 180 PIRSF PIRSF002161 1 180 5.6E-65 T 25-04-2016 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 SMA_RS00400 6cb95ce1059889fb7a9fcfb5bce55ccb 180 Pfam PF00673 ribosomal L5P family C-terminus 86 178 1.7E-39 T 25-04-2016 IPR031309 Ribosomal protein L5, C-terminal SMA_RS00400 6cb95ce1059889fb7a9fcfb5bce55ccb 180 ProSitePatterns PS00358 Ribosomal protein L5 signature. 58 74 - T 25-04-2016 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS00400 6cb95ce1059889fb7a9fcfb5bce55ccb 180 Gene3D G3DSA:3.30.1440.10 3 179 8.7E-77 T 25-04-2016 IPR022803 Ribosomal protein L5 domain SMA_RS00400 6cb95ce1059889fb7a9fcfb5bce55ccb 180 Pfam PF00281 Ribosomal protein L5 25 81 1.7E-26 T 25-04-2016 IPR031310 Ribosomal protein L5, N-terminal SMA_RS02365 0ec8a7891316a9cb183c55dd4367da40 337 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 3 335 21.098 T 25-04-2016 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 SMA_RS02365 0ec8a7891316a9cb183c55dd4367da40 337 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 46 58 2.3E-5 T 25-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 SMA_RS02365 0ec8a7891316a9cb183c55dd4367da40 337 ProSitePatterns PS01347 MraY family signature 1. 46 58 - T 25-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 SMA_RS02365 0ec8a7891316a9cb183c55dd4367da40 337 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 15 336 6.4E-74 T 25-04-2016 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 SMA_RS02365 0ec8a7891316a9cb183c55dd4367da40 337 ProSitePatterns PS01348 MraY family signature 2. 168 179 - T 25-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 SMA_RS02365 0ec8a7891316a9cb183c55dd4367da40 337 Pfam PF00953 Glycosyl transferase family 4 85 248 5.3E-38 T 25-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 SMA_RS02365 0ec8a7891316a9cb183c55dd4367da40 337 PANTHER PTHR22926 1 336 2.3E-119 T 25-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 SMA_RS02365 0ec8a7891316a9cb183c55dd4367da40 337 PANTHER PTHR22926:SF5 1 336 2.3E-119 T 25-04-2016 SMA_RS04180 7fe948105638e0d17338a461088cc46f 155 SUPERFAMILY SSF55729 1 151 5.89E-32 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMA_RS04180 7fe948105638e0d17338a461088cc46f 155 Gene3D G3DSA:3.40.630.30 1 153 1.6E-39 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMA_RS04180 7fe948105638e0d17338a461088cc46f 155 PANTHER PTHR23091 1 149 2.2E-28 T 25-04-2016 SMA_RS04180 7fe948105638e0d17338a461088cc46f 155 Pfam PF00583 Acetyltransferase (GNAT) family 62 144 1.2E-13 T 25-04-2016 IPR000182 GNAT domain GO:0008080 SMA_RS05770 cf437a8eff937657aa44831e68d5d333 1202 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 815 821 - T 25-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 SMA_RS05770 cf437a8eff937657aa44831e68d5d333 1202 Pfam PF07669 Eco57I restriction-modification methylase 812 922 7.1E-13 T 25-04-2016 IPR011639 Restriction modification methylase Eco57I GO:0003677|GO:0003824|GO:0006304 SMA_RS05770 cf437a8eff937657aa44831e68d5d333 1202 Pfam PF12950 TaqI-like C-terminal specificity domain 1022 1140 1.6E-24 T 25-04-2016 IPR025931 TaqI-like C-terminal specificity domain SMA_RS05770 cf437a8eff937657aa44831e68d5d333 1202 SUPERFAMILY SSF116734 1017 1162 2.83E-5 T 25-04-2016 SMA_RS05770 cf437a8eff937657aa44831e68d5d333 1202 SUPERFAMILY SSF53335 810 924 1.57E-53 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMA_RS05770 cf437a8eff937657aa44831e68d5d333 1202 SUPERFAMILY SSF53335 533 561 1.57E-53 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMA_RS05770 cf437a8eff937657aa44831e68d5d333 1202 SUPERFAMILY SSF53335 312 396 1.57E-53 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMA_RS05770 cf437a8eff937657aa44831e68d5d333 1202 SUPERFAMILY SSF53335 613 680 1.57E-53 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMA_RS05770 cf437a8eff937657aa44831e68d5d333 1202 SUPERFAMILY SSF53335 429 495 1.57E-53 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMA_RS05770 cf437a8eff937657aa44831e68d5d333 1202 Gene3D G3DSA:3.40.50.150 805 925 2.6E-47 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMA_RS05770 cf437a8eff937657aa44831e68d5d333 1202 Gene3D G3DSA:3.40.50.150 621 678 2.6E-47 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMA_RS05770 cf437a8eff937657aa44831e68d5d333 1202 Gene3D G3DSA:3.40.50.150 533 557 2.6E-47 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMA_RS05770 cf437a8eff937657aa44831e68d5d333 1202 Gene3D G3DSA:3.40.50.150 478 495 2.6E-47 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMA_RS05770 cf437a8eff937657aa44831e68d5d333 1202 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 537 551 3.6E-18 T 25-04-2016 SMA_RS05770 cf437a8eff937657aa44831e68d5d333 1202 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 849 873 3.6E-18 T 25-04-2016 SMA_RS05770 cf437a8eff937657aa44831e68d5d333 1202 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 476 492 3.6E-18 T 25-04-2016 SMA_RS05770 cf437a8eff937657aa44831e68d5d333 1202 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 812 824 3.6E-18 T 25-04-2016 SMA_RS05770 cf437a8eff937657aa44831e68d5d333 1202 PANTHER PTHR33841 597 922 2.4E-100 T 25-04-2016 SMA_RS05770 cf437a8eff937657aa44831e68d5d333 1202 PANTHER PTHR33841 520 571 2.4E-100 T 25-04-2016 SMA_RS05770 cf437a8eff937657aa44831e68d5d333 1202 PANTHER PTHR33841 52 503 2.4E-100 T 25-04-2016 SMA_RS05770 cf437a8eff937657aa44831e68d5d333 1202 PANTHER PTHR33841:SF1 597 922 2.4E-100 T 25-04-2016 SMA_RS05770 cf437a8eff937657aa44831e68d5d333 1202 PANTHER PTHR33841:SF1 520 571 2.4E-100 T 25-04-2016 SMA_RS05770 cf437a8eff937657aa44831e68d5d333 1202 PANTHER PTHR33841:SF1 52 503 2.4E-100 T 25-04-2016 SMA_RS00895 c1444737f3a44a82b6df698c7a453d3f 542 SUPERFAMILY SSF52029 182 374 2.24E-83 T 25-04-2016 IPR027409 GroEL-like apical domain SMA_RS00895 c1444737f3a44a82b6df698c7a453d3f 542 PANTHER PTHR11353 1 541 2.2E-238 T 25-04-2016 SMA_RS00895 c1444737f3a44a82b6df698c7a453d3f 542 ProSitePatterns PS00296 Chaperonins cpn60 signature. 403 414 - T 25-04-2016 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 SMA_RS00895 c1444737f3a44a82b6df698c7a453d3f 542 Gene3D G3DSA:3.50.7.10 195 365 3.5E-95 T 25-04-2016 IPR027409 GroEL-like apical domain SMA_RS00895 c1444737f3a44a82b6df698c7a453d3f 542 Hamap MF_00600 60 kDa chaperonin [groL]. 1 542 40.873 T 25-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 SMA_RS00895 c1444737f3a44a82b6df698c7a453d3f 542 Pfam PF00118 TCP-1/cpn60 chaperonin family 22 520 4.1E-103 T 25-04-2016 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 SMA_RS00895 c1444737f3a44a82b6df698c7a453d3f 542 SUPERFAMILY SSF48592 6 133 1.17E-79 T 25-04-2016 SMA_RS00895 c1444737f3a44a82b6df698c7a453d3f 542 SUPERFAMILY SSF48592 404 518 1.17E-79 T 25-04-2016 SMA_RS00895 c1444737f3a44a82b6df698c7a453d3f 542 TIGRFAM TIGR02348 GroEL: chaperonin GroL 2 523 9.6E-253 T 25-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 SMA_RS00895 c1444737f3a44a82b6df698c7a453d3f 542 PRINTS PR00298 60kDa chaperonin signature 396 417 6.4E-73 T 25-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 SMA_RS00895 c1444737f3a44a82b6df698c7a453d3f 542 PRINTS PR00298 60kDa chaperonin signature 82 109 6.4E-73 T 25-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 SMA_RS00895 c1444737f3a44a82b6df698c7a453d3f 542 PRINTS PR00298 60kDa chaperonin signature 266 289 6.4E-73 T 25-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 SMA_RS00895 c1444737f3a44a82b6df698c7a453d3f 542 PRINTS PR00298 60kDa chaperonin signature 26 52 6.4E-73 T 25-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 SMA_RS00895 c1444737f3a44a82b6df698c7a453d3f 542 PRINTS PR00298 60kDa chaperonin signature 348 373 6.4E-73 T 25-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 SMA_RS00895 c1444737f3a44a82b6df698c7a453d3f 542 Gene3D G3DSA:1.10.560.10 3 194 5.1E-49 T 25-04-2016 IPR027413 GroEL-like equatorial domain SMA_RS00895 c1444737f3a44a82b6df698c7a453d3f 542 Gene3D G3DSA:1.10.560.10 366 515 3.2E-43 T 25-04-2016 IPR027413 GroEL-like equatorial domain SMA_RS00895 c1444737f3a44a82b6df698c7a453d3f 542 SUPERFAMILY SSF54849 136 205 4.58E-26 T 25-04-2016 SMA_RS07200 cdfe1d41e1958f192ff0065d30b41ad2 214 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 91 101 3.9E-5 T 25-04-2016 SMA_RS07200 cdfe1d41e1958f192ff0065d30b41ad2 214 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 165 184 3.9E-5 T 25-04-2016 SMA_RS07200 cdfe1d41e1958f192ff0065d30b41ad2 214 Pfam PF12710 haloacid dehalogenase-like hydrolase 9 175 8.6E-22 T 25-04-2016 SMA_RS07200 cdfe1d41e1958f192ff0065d30b41ad2 214 Gene3D G3DSA:3.40.50.1000 69 201 2.8E-45 T 25-04-2016 IPR023214 HAD-like domain SMA_RS07200 cdfe1d41e1958f192ff0065d30b41ad2 214 Gene3D G3DSA:1.10.150.210 17 68 1.6E-26 T 25-04-2016 IPR023190 Phosphoserine phosphatase, domain 2 GO:0004647|GO:0006564 KEGG: 00260+3.1.3.3|KEGG: 00680+3.1.3.3|UniPathway: UPA00135 SMA_RS07200 cdfe1d41e1958f192ff0065d30b41ad2 214 SUPERFAMILY SSF56784 7 210 4.0E-49 T 25-04-2016 IPR023214 HAD-like domain SMA_RS07200 cdfe1d41e1958f192ff0065d30b41ad2 214 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 7 177 3.5E-34 T 25-04-2016 IPR006383 HAD-superfamily hydrolase, subfamily IB, PSPase-like GO:0008152|GO:0016791 SMA_RS07200 cdfe1d41e1958f192ff0065d30b41ad2 214 PANTHER PTHR10000 1 212 7.4E-81 T 25-04-2016 SMA_RS07200 cdfe1d41e1958f192ff0065d30b41ad2 214 TIGRFAM TIGR00338 serB: phosphoserine phosphatase SerB 2 210 1.4E-77 T 25-04-2016 SMA_RS07200 cdfe1d41e1958f192ff0065d30b41ad2 214 PANTHER PTHR10000:SF7 1 212 7.4E-81 T 25-04-2016 SMA_RS05735 5fc7dd31e1a9a416dea118b87c538485 316 ProSitePatterns PS01125 ROK family signature. 139 166 - T 25-04-2016 IPR000600 ROK family SMA_RS05735 5fc7dd31e1a9a416dea118b87c538485 316 Gene3D G3DSA:3.30.420.40 144 300 3.0E-52 T 25-04-2016 SMA_RS05735 5fc7dd31e1a9a416dea118b87c538485 316 PANTHER PTHR18964 1 316 2.2E-99 T 25-04-2016 SMA_RS05735 5fc7dd31e1a9a416dea118b87c538485 316 TIGRFAM TIGR00744 ROK_glcA_fam: ROK family protein (putative glucokinase) 6 315 4.6E-106 T 25-04-2016 IPR004654 Glucokinase ROK GO:0004340|GO:0005737|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 SMA_RS05735 5fc7dd31e1a9a416dea118b87c538485 316 Pfam PF00480 ROK family 6 315 4.1E-73 T 25-04-2016 IPR000600 ROK family SMA_RS05735 5fc7dd31e1a9a416dea118b87c538485 316 SUPERFAMILY SSF53067 4 315 4.32E-70 T 25-04-2016 SMA_RS05735 5fc7dd31e1a9a416dea118b87c538485 316 Gene3D G3DSA:3.30.420.40 3 143 2.0E-46 T 25-04-2016 SMA_RS05735 5fc7dd31e1a9a416dea118b87c538485 316 PANTHER PTHR18964:SF123 1 316 2.2E-99 T 25-04-2016 SMA_RS03450 427575e246d81349cc627cfcbbdeac1e 887 Gene3D G3DSA:3.30.499.10 18 240 6.8E-75 T 25-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SMA_RS03450 427575e246d81349cc627cfcbbdeac1e 887 TIGRFAM TIGR01341 aconitase_1: aconitate hydratase 1 14 884 0.0 T 25-04-2016 IPR006249 Aconitase/Iron-responsive element-binding protein 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3 SMA_RS03450 427575e246d81349cc627cfcbbdeac1e 887 SUPERFAMILY SSF52016 628 883 1.0E-75 T 25-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel SMA_RS03450 427575e246d81349cc627cfcbbdeac1e 887 Gene3D G3DSA:3.20.19.10 635 882 1.2E-69 T 25-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel SMA_RS03450 427575e246d81349cc627cfcbbdeac1e 887 Gene3D G3DSA:3.40.1060.10 241 358 2.8E-37 T 25-04-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SMA_RS03450 427575e246d81349cc627cfcbbdeac1e 887 Pfam PF00694 Aconitase C-terminal domain 687 813 1.1E-42 T 25-04-2016 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SMA_RS03450 427575e246d81349cc627cfcbbdeac1e 887 PANTHER PTHR11670 745 887 0.0 T 25-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SMA_RS03450 427575e246d81349cc627cfcbbdeac1e 887 PANTHER PTHR11670 413 708 0.0 T 25-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SMA_RS03450 427575e246d81349cc627cfcbbdeac1e 887 PANTHER PTHR11670 3 384 0.0 T 25-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SMA_RS03450 427575e246d81349cc627cfcbbdeac1e 887 PANTHER PTHR11670:SF1 745 887 0.0 T 25-04-2016 SMA_RS03450 427575e246d81349cc627cfcbbdeac1e 887 PANTHER PTHR11670:SF1 413 708 0.0 T 25-04-2016 SMA_RS03450 427575e246d81349cc627cfcbbdeac1e 887 PANTHER PTHR11670:SF1 3 384 0.0 T 25-04-2016 SMA_RS03450 427575e246d81349cc627cfcbbdeac1e 887 ProSitePatterns PS00450 Aconitase family signature 1. 424 440 - T 25-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SMA_RS03450 427575e246d81349cc627cfcbbdeac1e 887 SUPERFAMILY SSF53732 5 624 2.75E-218 T 25-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SMA_RS03450 427575e246d81349cc627cfcbbdeac1e 887 Pfam PF00330 Aconitase family (aconitate hydratase) 70 559 1.3E-174 T 25-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SMA_RS03450 427575e246d81349cc627cfcbbdeac1e 887 PRINTS PR00415 Aconitase family signature 490 503 9.3E-40 T 25-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SMA_RS03450 427575e246d81349cc627cfcbbdeac1e 887 PRINTS PR00415 Aconitase family signature 208 223 9.3E-40 T 25-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SMA_RS03450 427575e246d81349cc627cfcbbdeac1e 887 PRINTS PR00415 Aconitase family signature 284 297 9.3E-40 T 25-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SMA_RS03450 427575e246d81349cc627cfcbbdeac1e 887 PRINTS PR00415 Aconitase family signature 141 154 9.3E-40 T 25-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SMA_RS03450 427575e246d81349cc627cfcbbdeac1e 887 PRINTS PR00415 Aconitase family signature 194 207 9.3E-40 T 25-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SMA_RS03450 427575e246d81349cc627cfcbbdeac1e 887 PRINTS PR00415 Aconitase family signature 428 439 9.3E-40 T 25-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SMA_RS03450 427575e246d81349cc627cfcbbdeac1e 887 PRINTS PR00415 Aconitase family signature 270 283 9.3E-40 T 25-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SMA_RS03450 427575e246d81349cc627cfcbbdeac1e 887 PRINTS PR00415 Aconitase family signature 165 173 9.3E-40 T 25-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SMA_RS03450 427575e246d81349cc627cfcbbdeac1e 887 PRINTS PR00415 Aconitase family signature 363 377 9.3E-40 T 25-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SMA_RS03450 427575e246d81349cc627cfcbbdeac1e 887 ProSitePatterns PS01244 Aconitase family signature 2. 490 503 - T 25-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SMA_RS03450 427575e246d81349cc627cfcbbdeac1e 887 Gene3D G3DSA:3.30.499.10 359 384 5.1E-61 T 25-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SMA_RS03450 427575e246d81349cc627cfcbbdeac1e 887 Gene3D G3DSA:3.30.499.10 416 571 5.1E-61 T 25-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SMA_RS04740 2758abe3d9cbb90ec7492bfb41ecc0e6 375 PIRSF PIRSF005572 1 374 4.8E-110 T 25-04-2016 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 SMA_RS04740 2758abe3d9cbb90ec7492bfb41ecc0e6 375 PANTHER PTHR11601 1 369 2.9E-134 T 25-04-2016 SMA_RS04740 2758abe3d9cbb90ec7492bfb41ecc0e6 375 SUPERFAMILY SSF53383 1 370 2.82E-97 T 25-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SMA_RS04740 2758abe3d9cbb90ec7492bfb41ecc0e6 375 Gene3D G3DSA:3.90.1150.10 243 368 1.4E-29 T 25-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SMA_RS04740 2758abe3d9cbb90ec7492bfb41ecc0e6 375 Pfam PF00266 Aminotransferase class-V 2 361 1.3E-71 T 25-04-2016 IPR000192 Aminotransferase class V domain SMA_RS04740 2758abe3d9cbb90ec7492bfb41ecc0e6 375 Gene3D G3DSA:3.40.640.10 14 242 3.0E-79 T 25-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SMA_RS04740 2758abe3d9cbb90ec7492bfb41ecc0e6 375 PANTHER PTHR11601:SF45 1 369 2.9E-134 T 25-04-2016 SMA_RS05080 6779e80beb2f1ecc8cb6f39bdc17f163 276 Gene3D G3DSA:3.20.20.150 41 261 3.1E-7 T 25-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain SMA_RS05080 6779e80beb2f1ecc8cb6f39bdc17f163 276 SUPERFAMILY SSF51658 26 269 1.68E-11 T 25-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain SMA_RS09135 0a308f1237fd25423930995958c98c0c 76 Pfam PF07288 Protein of unknown function (DUF1447) 2 75 5.6E-30 T 25-04-2016 IPR009907 Protein of unknown function DUF1447 SMA_RS09135 0a308f1237fd25423930995958c98c0c 76 PANTHER PTHR41306 2 76 3.6E-20 T 25-04-2016 IPR009907 Protein of unknown function DUF1447 SMA_RS09135 0a308f1237fd25423930995958c98c0c 76 ProDom PD055417 UPF0356 TRANSCRIPTIONAL REGULATOR SP0122 SH1862 BLI01669/BL01628 MW0973 LMOF2365_1049 BCE33L3734 SPYM3_1619/SPS0248 1 75 2.0E-30 T 25-04-2016 IPR009907 Protein of unknown function DUF1447 SMA_RS09135 0a308f1237fd25423930995958c98c0c 76 Hamap MF_01553 UPF0356 protein . 1 76 21.987 T 25-04-2016 IPR009907 Protein of unknown function DUF1447 SMA_RS04025 3f8141b75168fbc4e2bcf88dfe2b7eb2 333 PANTHER PTHR35271 5 329 4.4E-60 T 25-04-2016 SMA_RS04025 3f8141b75168fbc4e2bcf88dfe2b7eb2 333 Gene3D G3DSA:3.40.50.2300 35 161 1.3E-56 T 25-04-2016 SMA_RS04025 3f8141b75168fbc4e2bcf88dfe2b7eb2 333 Pfam PF04392 ABC transporter substrate binding protein 37 325 2.2E-110 T 25-04-2016 IPR007487 ABC transporter, substrate-binding protein SMA_RS04025 3f8141b75168fbc4e2bcf88dfe2b7eb2 333 SUPERFAMILY SSF53822 42 291 5.97E-17 T 25-04-2016 IPR028082 Periplasmic binding protein-like I SMA_RS04025 3f8141b75168fbc4e2bcf88dfe2b7eb2 333 Gene3D G3DSA:3.40.50.2300 162 294 6.8E-52 T 25-04-2016 SMA_RS03710 34f0356848461ec402a846a33c551f26 141 Pfam PF04138 GtrA-like protein 11 137 7.9E-22 T 25-04-2016 IPR007267 GtrA-like protein GO:0000271|GO:0006810|GO:0016021 SMA_RS03710 34f0356848461ec402a846a33c551f26 141 PANTHER PTHR38459 8 141 7.3E-15 T 25-04-2016 SMA_RS02130 7c52ee30ba0ca744e180efdc1e1cf749 473 PANTHER PTHR11119 171 459 2.9E-136 T 25-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 SMA_RS02130 7c52ee30ba0ca744e180efdc1e1cf749 473 PANTHER PTHR11119 1 150 2.9E-136 T 25-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 SMA_RS02130 7c52ee30ba0ca744e180efdc1e1cf749 473 PANTHER PTHR11119:SF9 171 459 2.9E-136 T 25-04-2016 IPR029940 AzgA purine transporter GO:0005345|GO:0006863 SMA_RS02130 7c52ee30ba0ca744e180efdc1e1cf749 473 PANTHER PTHR11119:SF9 1 150 2.9E-136 T 25-04-2016 IPR029940 AzgA purine transporter GO:0005345|GO:0006863 SMA_RS02130 7c52ee30ba0ca744e180efdc1e1cf749 473 PIRSF PIRSF005353 1 472 2.1E-158 T 25-04-2016 IPR026033 Purine permease PbuG-like SMA_RS02130 7c52ee30ba0ca744e180efdc1e1cf749 473 Pfam PF00860 Permease family 17 162 2.5E-15 T 25-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 SMA_RS02130 7c52ee30ba0ca744e180efdc1e1cf749 473 Pfam PF00860 Permease family 180 432 2.8E-25 T 25-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 SMA_RS01270 1aadc3191a48ceb619454d148e8b95db 277 SUPERFAMILY SSF46689 173 223 7.17E-8 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMA_RS01270 1aadc3191a48ceb619454d148e8b95db 277 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 226 268 - T 25-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 SMA_RS01270 1aadc3191a48ceb619454d148e8b95db 277 Gene3D G3DSA:1.10.10.60 174 225 2.7E-13 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMA_RS01270 1aadc3191a48ceb619454d148e8b95db 277 PANTHER PTHR11019:SF103 25 277 6.8E-37 T 25-04-2016 SMA_RS01270 1aadc3191a48ceb619454d148e8b95db 277 Pfam PF12833 Helix-turn-helix domain 195 273 5.2E-22 T 25-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SMA_RS01270 1aadc3191a48ceb619454d148e8b95db 277 SMART SM00342 189 272 5.7E-32 T 25-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SMA_RS01270 1aadc3191a48ceb619454d148e8b95db 277 PANTHER PTHR11019 25 277 6.8E-37 T 25-04-2016 SMA_RS01270 1aadc3191a48ceb619454d148e8b95db 277 Pfam PF02311 AraC-like ligand binding domain 18 151 8.3E-25 T 25-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 SMA_RS01270 1aadc3191a48ceb619454d148e8b95db 277 Gene3D G3DSA:2.60.120.280 10 161 4.7E-32 T 25-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 SMA_RS01270 1aadc3191a48ceb619454d148e8b95db 277 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 256 272 1.4E-7 T 25-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 SMA_RS01270 1aadc3191a48ceb619454d148e8b95db 277 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 241 256 1.4E-7 T 25-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 SMA_RS01270 1aadc3191a48ceb619454d148e8b95db 277 SUPERFAMILY SSF51215 13 158 9.55E-32 T 25-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 SMA_RS01270 1aadc3191a48ceb619454d148e8b95db 277 SUPERFAMILY SSF46689 225 274 5.38E-13 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMA_RS01270 1aadc3191a48ceb619454d148e8b95db 277 Gene3D G3DSA:1.10.10.60 226 274 5.7E-18 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMA_RS04440 ec69f573f8370affebd77a11d679073e 337 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 91 140 7.1E-10 T 25-04-2016 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain SMA_RS04440 ec69f573f8370affebd77a11d679073e 337 PANTHER PTHR33498:SF1 1 337 5.5E-104 T 25-04-2016 SMA_RS04440 ec69f573f8370affebd77a11d679073e 337 PANTHER PTHR33498 1 337 5.5E-104 T 25-04-2016 SMA_RS04440 ec69f573f8370affebd77a11d679073e 337 Pfam PF01610 Transposase 157 335 2.7E-31 T 25-04-2016 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain SMA_RS04440 ec69f573f8370affebd77a11d679073e 337 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 41 85 5.1E-10 T 25-04-2016 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger SMA_RS09245 690e4a42decdf1bce3a62b1705951ae3 104 PANTHER PTHR40448:SF1 6 104 2.5E-15 T 25-04-2016 SMA_RS09245 690e4a42decdf1bce3a62b1705951ae3 104 Pfam PF14501 GHKL domain 14 103 9.1E-10 T 25-04-2016 IPR032834 Sensor histidine kinase NatK, C-terminal domain SMA_RS09245 690e4a42decdf1bce3a62b1705951ae3 104 PANTHER PTHR40448 6 104 2.5E-15 T 25-04-2016 SMA_RS08745 5e34d8fff31845171cdd4f2959788865 671 SUPERFAMILY SSF52540 169 430 2.88E-58 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS08745 5e34d8fff31845171cdd4f2959788865 671 PANTHER PTHR24031 283 580 3.2E-118 T 25-04-2016 SMA_RS08745 5e34d8fff31845171cdd4f2959788865 671 PANTHER PTHR24031 199 225 3.2E-118 T 25-04-2016 SMA_RS08745 5e34d8fff31845171cdd4f2959788865 671 PANTHER PTHR24031 603 648 3.2E-118 T 25-04-2016 SMA_RS08745 5e34d8fff31845171cdd4f2959788865 671 Gene3D G3DSA:2.40.50.140 44 118 9.9E-18 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMA_RS08745 5e34d8fff31845171cdd4f2959788865 671 PANTHER PTHR24031:SF249 283 580 3.2E-118 T 25-04-2016 SMA_RS08745 5e34d8fff31845171cdd4f2959788865 671 PANTHER PTHR24031:SF249 199 225 3.2E-118 T 25-04-2016 SMA_RS08745 5e34d8fff31845171cdd4f2959788865 671 PANTHER PTHR24031:SF249 603 648 3.2E-118 T 25-04-2016 SMA_RS08745 5e34d8fff31845171cdd4f2959788865 671 SUPERFAMILY SSF50249 1 161 2.57E-29 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMA_RS08745 5e34d8fff31845171cdd4f2959788865 671 Gene3D G3DSA:3.40.50.300 433 615 6.8E-45 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS08745 5e34d8fff31845171cdd4f2959788865 671 Gene3D G3DSA:3.40.50.300 247 432 6.6E-55 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS08745 5e34d8fff31845171cdd4f2959788865 671 SUPERFAMILY SSF52540 273 326 6.39E-44 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS08745 5e34d8fff31845171cdd4f2959788865 671 SUPERFAMILY SSF52540 485 630 6.39E-44 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS08745 5e34d8fff31845171cdd4f2959788865 671 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 25 641 5.0E-238 T 25-04-2016 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 SMA_RS08745 5e34d8fff31845171cdd4f2959788865 671 SMART SM00487 249 437 2.5E-27 T 25-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain SMA_RS08745 5e34d8fff31845171cdd4f2959788865 671 SMART SM00490 486 567 9.6E-21 T 25-04-2016 IPR001650 Helicase, C-terminal SMA_RS08745 5e34d8fff31845171cdd4f2959788865 671 Pfam PF00270 DEAD/DEAH box helicase 257 409 4.3E-16 T 25-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 SMA_RS08745 5e34d8fff31845171cdd4f2959788865 671 Pfam PF00271 Helicase conserved C-terminal domain 450 566 5.6E-20 T 25-04-2016 IPR001650 Helicase, C-terminal SMA_RS08745 5e34d8fff31845171cdd4f2959788865 671 Pfam PF17191 RecG wedge domain 10 158 2.0E-15 T 25-04-2016 IPR033454 RecG, wedge domain SMA_RS05885 ea988bda59c26b24e360a15e685d18f1 252 Pfam PF00005 ABC transporter 17 168 2.4E-31 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMA_RS05885 ea988bda59c26b24e360a15e685d18f1 252 PANTHER PTHR24220:SF550 3 249 9.1E-129 T 25-04-2016 SMA_RS05885 ea988bda59c26b24e360a15e685d18f1 252 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SMA_RS05885 ea988bda59c26b24e360a15e685d18f1 252 PIRSF PIRSF039085 1 244 3.8E-104 T 25-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 SMA_RS05885 ea988bda59c26b24e360a15e685d18f1 252 SMART SM00382 26 216 5.5E-17 T 25-04-2016 IPR003593 AAA+ ATPase domain SMA_RS05885 ea988bda59c26b24e360a15e685d18f1 252 SUPERFAMILY SSF52540 1 238 9.35E-76 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS05885 ea988bda59c26b24e360a15e685d18f1 252 Gene3D G3DSA:3.40.50.300 1 239 6.0E-82 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS05885 ea988bda59c26b24e360a15e685d18f1 252 PANTHER PTHR24220 3 249 9.1E-129 T 25-04-2016 SMA_RS01965 23f52a977e648871a8ee22ea3fbe7c37 304 SUPERFAMILY SSF161098 89 290 3.4E-19 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SMA_RS01965 23f52a977e648871a8ee22ea3fbe7c37 304 PANTHER PTHR30465:SF74 1 303 3.3E-124 T 25-04-2016 SMA_RS01965 23f52a977e648871a8ee22ea3fbe7c37 304 PANTHER PTHR30465 1 303 3.3E-124 T 25-04-2016 SMA_RS01965 23f52a977e648871a8ee22ea3fbe7c37 304 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 111 302 2.0E-39 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SMA_RS01965 23f52a977e648871a8ee22ea3fbe7c37 304 Gene3D G3DSA:1.10.3720.10 87 293 9.5E-18 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SMA_RS01865 729bf3f9956e9a21cd54bb7fdd471487 573 PANTHER PTHR21000 1 571 0.0 T 25-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 SMA_RS01865 729bf3f9956e9a21cd54bb7fdd471487 573 SUPERFAMILY SSF52016 375 555 4.16E-59 T 25-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel SMA_RS01865 729bf3f9956e9a21cd54bb7fdd471487 573 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 121 131 - T 25-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 SMA_RS01865 729bf3f9956e9a21cd54bb7fdd471487 573 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 1 555 44.642 T 25-04-2016 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 SMA_RS01865 729bf3f9956e9a21cd54bb7fdd471487 573 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 463 474 - T 25-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 SMA_RS01865 729bf3f9956e9a21cd54bb7fdd471487 573 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 15 553 4.9E-229 T 25-04-2016 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 SMA_RS01865 729bf3f9956e9a21cd54bb7fdd471487 573 SUPERFAMILY SSF143975 1 374 1.31E-130 T 25-04-2016 SMA_RS01865 729bf3f9956e9a21cd54bb7fdd471487 573 PANTHER PTHR21000:SF11 1 571 0.0 T 25-04-2016 SMA_RS01865 729bf3f9956e9a21cd54bb7fdd471487 573 Pfam PF00920 Dehydratase family 33 551 1.2E-215 T 25-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 SMA_RS05940 28ca073930c4f30529e9401da3b5b57c 391 PANTHER PTHR30408:SF2 6 390 3.9E-18 T 25-04-2016 SMA_RS05940 28ca073930c4f30529e9401da3b5b57c 391 PANTHER PTHR30408 6 390 3.9E-18 T 25-04-2016 SMA_RS05940 28ca073930c4f30529e9401da3b5b57c 391 Pfam PF01420 Type I restriction modification DNA specificity domain 211 379 4.1E-13 T 25-04-2016 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 SMA_RS05940 28ca073930c4f30529e9401da3b5b57c 391 Pfam PF01420 Type I restriction modification DNA specificity domain 19 177 1.7E-20 T 25-04-2016 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 SMA_RS05940 28ca073930c4f30529e9401da3b5b57c 391 SUPERFAMILY SSF116734 13 196 6.54E-40 T 25-04-2016 SMA_RS05940 28ca073930c4f30529e9401da3b5b57c 391 SUPERFAMILY SSF116734 199 390 6.54E-40 T 25-04-2016 SMA_RS03765 faf9e3dbfce24b724cf8c9e77e27e8b1 501 SUPERFAMILY SSF50615 10 94 2.43E-28 T 25-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SMA_RS03765 faf9e3dbfce24b724cf8c9e77e27e8b1 501 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 1 499 49.86 T 25-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SMA_RS03765 faf9e3dbfce24b724cf8c9e77e27e8b1 501 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 371 492 6.7E-48 T 25-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SMA_RS03765 faf9e3dbfce24b724cf8c9e77e27e8b1 501 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 149 364 3.1E-71 T 25-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SMA_RS03765 faf9e3dbfce24b724cf8c9e77e27e8b1 501 SUPERFAMILY SSF47917 372 497 4.45E-48 T 25-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SMA_RS03765 faf9e3dbfce24b724cf8c9e77e27e8b1 501 PANTHER PTHR15184:SF3 1 486 2.1E-296 T 25-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SMA_RS03765 faf9e3dbfce24b724cf8c9e77e27e8b1 501 Gene3D G3DSA:3.40.50.300 94 371 1.6E-114 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS03765 faf9e3dbfce24b724cf8c9e77e27e8b1 501 Gene3D G3DSA:1.20.150.20 372 497 6.9E-51 T 25-04-2016 SMA_RS03765 faf9e3dbfce24b724cf8c9e77e27e8b1 501 PIRSF PIRSF039088 1 501 3.4E-239 T 25-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SMA_RS03765 faf9e3dbfce24b724cf8c9e77e27e8b1 501 Gene3D G3DSA:2.40.30.20 3 93 4.7E-35 T 25-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SMA_RS03765 faf9e3dbfce24b724cf8c9e77e27e8b1 501 PANTHER PTHR15184 1 486 2.1E-296 T 25-04-2016 SMA_RS03765 faf9e3dbfce24b724cf8c9e77e27e8b1 501 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 3 497 1.3E-248 T 25-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SMA_RS03765 faf9e3dbfce24b724cf8c9e77e27e8b1 501 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 26 92 2.2E-17 T 25-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SMA_RS03765 faf9e3dbfce24b724cf8c9e77e27e8b1 501 SUPERFAMILY SSF52540 95 370 5.08E-97 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS04360 028e7ebfb017f4105b0558fa00b7acda 493 PANTHER PTHR33392 243 454 2.8E-44 T 25-04-2016 SMA_RS04360 028e7ebfb017f4105b0558fa00b7acda 493 Pfam PF02916 DNA polymerase processivity factor 78 193 9.0E-37 T 25-04-2016 IPR004190 DNA polymerase processivity factor GO:0006260 SMA_RS04360 028e7ebfb017f4105b0558fa00b7acda 493 Gene3D G3DSA:3.40.190.10 115 197 1.2E-5 T 25-04-2016 SMA_RS04360 028e7ebfb017f4105b0558fa00b7acda 493 Pfam PF03816 Cell envelope-related transcriptional attenuator domain 254 401 1.3E-41 T 25-04-2016 IPR004474 Cell envelope-related transcriptional attenuator domain SMA_RS04360 028e7ebfb017f4105b0558fa00b7acda 493 PANTHER PTHR33392:SF5 243 454 2.8E-44 T 25-04-2016 SMA_RS04360 028e7ebfb017f4105b0558fa00b7acda 493 TIGRFAM TIGR00350 lytR_cpsA_psr: cell envelope-related function transcriptional attenuator common domain 254 401 1.1E-27 T 25-04-2016 IPR004474 Cell envelope-related transcriptional attenuator domain SMA_RS04360 028e7ebfb017f4105b0558fa00b7acda 493 SUPERFAMILY SSF53850 109 209 1.19E-5 T 25-04-2016 SMA_RS08550 2f9eab40deddd5bbc55f9ea1ea54d96c 354 Gene3D G3DSA:3.40.50.300 4 251 4.6E-82 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS08550 2f9eab40deddd5bbc55f9ea1ea54d96c 354 SMART SM00930 275 350 5.4E-26 T 25-04-2016 IPR018449 NIL domain SMA_RS08550 2f9eab40deddd5bbc55f9ea1ea54d96c 354 Pfam PF00005 ABC transporter 25 178 1.2E-34 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMA_RS08550 2f9eab40deddd5bbc55f9ea1ea54d96c 354 Pfam PF09383 NIL domain 278 348 1.9E-17 T 25-04-2016 IPR018449 NIL domain SMA_RS08550 2f9eab40deddd5bbc55f9ea1ea54d96c 354 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SMA_RS08550 2f9eab40deddd5bbc55f9ea1ea54d96c 354 Gene3D G3DSA:3.30.70.260 264 352 1.4E-25 T 25-04-2016 SMA_RS08550 2f9eab40deddd5bbc55f9ea1ea54d96c 354 PANTHER PTHR24220:SF549 7 349 2.3E-137 T 25-04-2016 IPR026253 Methionine import ATP-binding protein MetN GO:0005524|GO:0015821|GO:0042626 SMA_RS08550 2f9eab40deddd5bbc55f9ea1ea54d96c 354 PANTHER PTHR24220 7 349 2.3E-137 T 25-04-2016 SMA_RS08550 2f9eab40deddd5bbc55f9ea1ea54d96c 354 SUPERFAMILY SSF55021 265 351 4.92E-20 T 25-04-2016 SMA_RS08550 2f9eab40deddd5bbc55f9ea1ea54d96c 354 SUPERFAMILY SSF52540 5 249 1.43E-78 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS08550 2f9eab40deddd5bbc55f9ea1ea54d96c 354 SMART SM00382 34 227 7.0E-12 T 25-04-2016 IPR003593 AAA+ ATPase domain SMA_RS03325 7395ab073ae05391d80138dfad03f2c6 342 Gene3D G3DSA:3.40.1780.10 1 62 1.8E-99 T 25-04-2016 SMA_RS03325 7395ab073ae05391d80138dfad03f2c6 342 Gene3D G3DSA:3.40.1780.10 178 341 1.8E-99 T 25-04-2016 SMA_RS03325 7395ab073ae05391d80138dfad03f2c6 342 Gene3D G3DSA:2.40.10.240 64 143 1.4E-30 T 25-04-2016 SMA_RS03325 7395ab073ae05391d80138dfad03f2c6 342 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 1 342 46.25 T 25-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 SMA_RS03325 7395ab073ae05391d80138dfad03f2c6 342 Pfam PF02547 Queuosine biosynthesis protein 4 341 2.8E-138 T 25-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 SMA_RS03325 7395ab073ae05391d80138dfad03f2c6 342 PANTHER PTHR30307:SF0 2 341 2.2E-176 T 25-04-2016 SMA_RS03325 7395ab073ae05391d80138dfad03f2c6 342 SUPERFAMILY SSF111337 1 341 1.02E-137 T 25-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 SMA_RS03325 7395ab073ae05391d80138dfad03f2c6 342 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1 341 2.7E-138 T 25-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 SMA_RS03325 7395ab073ae05391d80138dfad03f2c6 342 PANTHER PTHR30307 2 341 2.2E-176 T 25-04-2016 SMA_RS01060 065773f3b1c8a5782d8aade9f9212508 317 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 3 307 5.0E-109 T 25-04-2016 SMA_RS01060 065773f3b1c8a5782d8aade9f9212508 317 PANTHER PTHR18895 17 312 5.5E-90 T 25-04-2016 SMA_RS01060 065773f3b1c8a5782d8aade9f9212508 317 PANTHER PTHR18895:SF3 17 312 5.5E-90 T 25-04-2016 SMA_RS01060 065773f3b1c8a5782d8aade9f9212508 317 TIGRFAM TIGR00406 prmA: ribosomal protein L11 methyltransferase 4 300 7.6E-74 T 25-04-2016 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 SMA_RS01060 065773f3b1c8a5782d8aade9f9212508 317 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 4 307 34.464 T 25-04-2016 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 SMA_RS01060 065773f3b1c8a5782d8aade9f9212508 317 PIRSF PIRSF000401 2 309 3.6E-109 T 25-04-2016 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 SMA_RS01060 065773f3b1c8a5782d8aade9f9212508 317 SUPERFAMILY SSF53335 58 305 3.26E-42 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMA_RS01060 065773f3b1c8a5782d8aade9f9212508 317 Gene3D G3DSA:3.40.50.150 110 301 4.9E-46 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMA_RS07285 256a2484b3b6e0fa0ac4f25e8ac29a79 339 Gene3D G3DSA:3.20.20.140 6 333 3.0E-98 T 25-04-2016 SMA_RS07285 256a2484b3b6e0fa0ac4f25e8ac29a79 339 SUPERFAMILY SSF51556 6 338 2.04E-81 T 25-04-2016 IPR032466 Metal-dependent hydrolase SMA_RS07285 256a2484b3b6e0fa0ac4f25e8ac29a79 339 Pfam PF00962 Adenosine/AMP deaminase 9 330 2.4E-62 T 25-04-2016 IPR001365 Adenosine/AMP deaminase domain GO:0019239 SMA_RS07285 256a2484b3b6e0fa0ac4f25e8ac29a79 339 PANTHER PTHR11409 11 339 8.7E-92 T 25-04-2016 SMA_RS07285 256a2484b3b6e0fa0ac4f25e8ac29a79 339 TIGRFAM TIGR01430 aden_deam: adenosine deaminase 10 331 1.8E-85 T 25-04-2016 IPR006330 Adenosine/adenine deaminase GO:0019239 SMA_RS07285 256a2484b3b6e0fa0ac4f25e8ac29a79 339 Hamap MF_00540 Adenosine deaminase [add]. 4 332 55.479 T 25-04-2016 IPR028893 Adenosine deaminase GO:0004000|GO:0009168 KEGG: 00230+3.5.4.4|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 SMA_RS01370 d0596b0a17e811824b8ba2dd9320cd97 204 PRINTS PR01576 Peptide deformylase signature 129 140 2.4E-29 T 25-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 SMA_RS01370 d0596b0a17e811824b8ba2dd9320cd97 204 PRINTS PR01576 Peptide deformylase signature 142 160 2.4E-29 T 25-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 SMA_RS01370 d0596b0a17e811824b8ba2dd9320cd97 204 PRINTS PR01576 Peptide deformylase signature 59 88 2.4E-29 T 25-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 SMA_RS01370 d0596b0a17e811824b8ba2dd9320cd97 204 PRINTS PR01576 Peptide deformylase signature 161 190 2.4E-29 T 25-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 SMA_RS01370 d0596b0a17e811824b8ba2dd9320cd97 204 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 18 198 4.5E-38 T 25-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 SMA_RS01370 d0596b0a17e811824b8ba2dd9320cd97 204 SUPERFAMILY SSF56420 6 201 6.41E-58 T 25-04-2016 IPR023635 Peptide deformylase SMA_RS01370 d0596b0a17e811824b8ba2dd9320cd97 204 Gene3D G3DSA:3.90.45.10 16 200 7.5E-53 T 25-04-2016 IPR023635 Peptide deformylase SMA_RS01370 d0596b0a17e811824b8ba2dd9320cd97 204 Pfam PF01327 Polypeptide deformylase 16 192 8.8E-45 T 25-04-2016 IPR023635 Peptide deformylase SMA_RS01370 d0596b0a17e811824b8ba2dd9320cd97 204 PANTHER PTHR10458:SF8 13 204 4.3E-94 T 25-04-2016 SMA_RS01370 d0596b0a17e811824b8ba2dd9320cd97 204 PANTHER PTHR10458 13 204 4.3E-94 T 25-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 SMA_RS01370 d0596b0a17e811824b8ba2dd9320cd97 204 Hamap MF_00163 Peptide deformylase [def]. 15 203 25.877 T 25-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 SMA_RS01370 d0596b0a17e811824b8ba2dd9320cd97 204 PIRSF PIRSF004749 5 204 2.5E-44 T 25-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 SMA_RS04765 dc96519556bd0a12fed8c6d9feaa3994 296 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 32 292 1.4E-68 T 25-04-2016 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 SMA_RS04765 dc96519556bd0a12fed8c6d9feaa3994 296 PANTHER PTHR11079:SF73 35 296 3.3E-82 T 25-04-2016 SMA_RS04765 dc96519556bd0a12fed8c6d9feaa3994 296 Pfam PF00849 RNA pseudouridylate synthase 84 236 2.6E-32 T 25-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 SMA_RS04765 dc96519556bd0a12fed8c6d9feaa3994 296 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 127 141 - T 25-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 SMA_RS04765 dc96519556bd0a12fed8c6d9feaa3994 296 PANTHER PTHR11079 35 296 3.3E-82 T 25-04-2016 SMA_RS04765 dc96519556bd0a12fed8c6d9feaa3994 296 SUPERFAMILY SSF55120 69 288 2.56E-67 T 25-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 SMA_RS00770 bea92f2c1355b1b16040ee9fa0c38dc9 162 SUPERFAMILY SSF52255 4 158 5.76E-66 T 25-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 SMA_RS00770 bea92f2c1355b1b16040ee9fa0c38dc9 162 PANTHER PTHR23046 1 162 8.0E-89 T 25-04-2016 SMA_RS00770 bea92f2c1355b1b16040ee9fa0c38dc9 162 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 5 158 32.355 T 25-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 SMA_RS00770 bea92f2c1355b1b16040ee9fa0c38dc9 162 PIRSF PIRSF001338 1 162 3.0E-69 T 25-04-2016 IPR024694 N5-carboxyaminoimidazole ribonucleotide mutase PurE GO:0006189|GO:0034023 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234|UniPathway: UPA00074 SMA_RS00770 bea92f2c1355b1b16040ee9fa0c38dc9 162 PANTHER PTHR23046:SF2 1 162 8.0E-89 T 25-04-2016 SMA_RS00770 bea92f2c1355b1b16040ee9fa0c38dc9 162 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 5 155 7.6E-66 T 25-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 SMA_RS00770 bea92f2c1355b1b16040ee9fa0c38dc9 162 SMART SM01001 3 154 4.3E-100 T 25-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 SMA_RS00770 bea92f2c1355b1b16040ee9fa0c38dc9 162 Pfam PF00731 AIR carboxylase 5 149 4.4E-65 T 25-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 SMA_RS00770 bea92f2c1355b1b16040ee9fa0c38dc9 162 Gene3D G3DSA:3.40.50.7700 2 159 3.0E-75 T 25-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 SMA_RS02085 1187fffb2b12b67433fcc121a2054e5b 257 PANTHER PTHR22855:SF42 8 257 1.3E-93 T 25-04-2016 SMA_RS02085 1187fffb2b12b67433fcc121a2054e5b 257 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 145 154 3.9E-43 T 25-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 SMA_RS02085 1187fffb2b12b67433fcc121a2054e5b 257 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 101 114 3.9E-43 T 25-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 SMA_RS02085 1187fffb2b12b67433fcc121a2054e5b 257 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 61 79 3.9E-43 T 25-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 SMA_RS02085 1187fffb2b12b67433fcc121a2054e5b 257 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 36 47 3.9E-43 T 25-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 SMA_RS02085 1187fffb2b12b67433fcc121a2054e5b 257 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 82 98 3.9E-43 T 25-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 SMA_RS02085 1187fffb2b12b67433fcc121a2054e5b 257 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 117 130 3.9E-43 T 25-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 SMA_RS02085 1187fffb2b12b67433fcc121a2054e5b 257 SUPERFAMILY SSF52096 10 256 9.53E-85 T 25-04-2016 IPR029045 ClpP/crotonase-like domain SMA_RS02085 1187fffb2b12b67433fcc121a2054e5b 257 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 2 257 36.035 T 25-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 SMA_RS02085 1187fffb2b12b67433fcc121a2054e5b 257 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 9 257 9.1E-108 T 25-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 SMA_RS02085 1187fffb2b12b67433fcc121a2054e5b 257 Gene3D G3DSA:3.90.226.10 11 215 4.4E-51 T 25-04-2016 IPR029045 ClpP/crotonase-like domain SMA_RS02085 1187fffb2b12b67433fcc121a2054e5b 257 PANTHER PTHR22855 8 257 1.3E-93 T 25-04-2016 SMA_RS02085 1187fffb2b12b67433fcc121a2054e5b 257 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 12 96 4.8E-40 T 25-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 SMA_RS04040 f033c0e572016347b9d10ed4698a057d 90 TIGRFAM TIGR04197 T7SS_SACOL2603: type VII secretion effector, TIGR04197 family 4 87 5.3E-25 T 25-04-2016 IPR021477 Type VII secretion effector, SACOL2603 family SMA_RS09205 8c45d0070f3964cf18ff102b19d15196 312 PANTHER PTHR37294 1 312 1.9E-114 T 25-04-2016 SMA_RS09205 8c45d0070f3964cf18ff102b19d15196 312 Gene3D G3DSA:1.10.3210.10 156 279 7.6E-7 T 25-04-2016 IPR006674 HD domain SMA_RS09205 8c45d0070f3964cf18ff102b19d15196 312 SMART SM00471 154 288 0.0031 T 25-04-2016 IPR003607 HD/PDEase domain SMA_RS09205 8c45d0070f3964cf18ff102b19d15196 312 Gene3D G3DSA:2.40.50.140 18 85 2.6E-4 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMA_RS09205 8c45d0070f3964cf18ff102b19d15196 312 SUPERFAMILY SSF109604 143 281 6.98E-11 T 25-04-2016 SMA_RS09205 8c45d0070f3964cf18ff102b19d15196 312 Pfam PF01966 HD domain 160 278 1.7E-7 T 25-04-2016 IPR006674 HD domain SMA_RS09205 8c45d0070f3964cf18ff102b19d15196 312 PANTHER PTHR37294:SF1 1 312 1.9E-114 T 25-04-2016 SMA_RS06075 2c8a82e366e120a248f507ec5e9e091a 401 Gene3D G3DSA:1.10.3090.10 148 367 1.5E-50 T 25-04-2016 SMA_RS06075 2c8a82e366e120a248f507ec5e9e091a 401 PANTHER PTHR13734 12 342 1.8E-69 T 25-04-2016 SMA_RS06075 2c8a82e366e120a248f507ec5e9e091a 401 Pfam PF13735 tRNA nucleotidyltransferase domain 2 putative 251 395 1.5E-44 T 25-04-2016 IPR032810 CCA-adding enzyme, C-terminal SMA_RS06075 2c8a82e366e120a248f507ec5e9e091a 401 SUPERFAMILY SSF81301 10 144 1.74E-41 T 25-04-2016 SMA_RS06075 2c8a82e366e120a248f507ec5e9e091a 401 Hamap MF_01263 CCA-adding enzyme [cca]. 7 400 42.441 T 25-04-2016 IPR023068 CCA-adding enzyme, firmicutes GO:0001680|GO:0004810|GO:0016437 SMA_RS06075 2c8a82e366e120a248f507ec5e9e091a 401 Gene3D G3DSA:3.30.460.10 11 147 2.4E-46 T 25-04-2016 SMA_RS06075 2c8a82e366e120a248f507ec5e9e091a 401 SUPERFAMILY SSF81891 145 398 7.85E-55 T 25-04-2016 SMA_RS06075 2c8a82e366e120a248f507ec5e9e091a 401 Pfam PF01743 Poly A polymerase head domain 27 147 2.4E-35 T 25-04-2016 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 SMA_RS06075 2c8a82e366e120a248f507ec5e9e091a 401 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 174 234 5.8E-18 T 25-04-2016 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain SMA_RS07980 dcd0a4a8b33acddd9a805764284062c6 92 Pfam PF12840 Helix-turn-helix domain 5 61 8.0E-13 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMA_RS07980 dcd0a4a8b33acddd9a805764284062c6 92 Gene3D G3DSA:1.10.10.10 3 84 3.9E-27 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMA_RS07980 dcd0a4a8b33acddd9a805764284062c6 92 SMART SM00418 5 83 2.8E-22 T 25-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SMA_RS07980 dcd0a4a8b33acddd9a805764284062c6 92 SUPERFAMILY SSF46785 3 84 6.13E-24 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMA_RS07980 dcd0a4a8b33acddd9a805764284062c6 92 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 39 54 1.1E-12 T 25-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SMA_RS07980 dcd0a4a8b33acddd9a805764284062c6 92 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 54 69 1.1E-12 T 25-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SMA_RS07980 dcd0a4a8b33acddd9a805764284062c6 92 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 7 22 1.1E-12 T 25-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SMA_RS07980 dcd0a4a8b33acddd9a805764284062c6 92 PANTHER PTHR33154 4 84 3.3E-21 T 25-04-2016 SMA_RS02920 d2658555f4f95dc04bb975600fd95a54 189 PANTHER PTHR11922 1 185 2.3E-74 T 25-04-2016 SMA_RS02920 d2658555f4f95dc04bb975600fd95a54 189 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 1 184 3.6E-57 T 25-04-2016 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain GO:0008152 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 SMA_RS02920 d2658555f4f95dc04bb975600fd95a54 189 SUPERFAMILY SSF52317 1 187 1.27E-52 T 25-04-2016 IPR029062 Class I glutamine amidotransferase-like SMA_RS02920 d2658555f4f95dc04bb975600fd95a54 189 Gene3D G3DSA:3.40.50.880 1 186 2.8E-62 T 25-04-2016 IPR029062 Class I glutamine amidotransferase-like SMA_RS02920 d2658555f4f95dc04bb975600fd95a54 189 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 42 56 2.9E-7 T 25-04-2016 SMA_RS02920 d2658555f4f95dc04bb975600fd95a54 189 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 72 88 2.9E-7 T 25-04-2016 SMA_RS02920 d2658555f4f95dc04bb975600fd95a54 189 PANTHER PTHR11922:SF7 1 185 2.3E-74 T 25-04-2016 SMA_RS02920 d2658555f4f95dc04bb975600fd95a54 189 PRINTS PR00096 Glutamine amidotransferase superfamily signature 72 83 9.7E-14 T 25-04-2016 SMA_RS02920 d2658555f4f95dc04bb975600fd95a54 189 PRINTS PR00096 Glutamine amidotransferase superfamily signature 45 54 9.7E-14 T 25-04-2016 SMA_RS02920 d2658555f4f95dc04bb975600fd95a54 189 PRINTS PR00096 Glutamine amidotransferase superfamily signature 162 175 9.7E-14 T 25-04-2016 SMA_RS02920 d2658555f4f95dc04bb975600fd95a54 189 PRINTS PR00097 Anthranilate synthase component II signature 118 130 5.0E-33 T 25-04-2016 SMA_RS02920 d2658555f4f95dc04bb975600fd95a54 189 PRINTS PR00097 Anthranilate synthase component II signature 162 175 5.0E-33 T 25-04-2016 SMA_RS02920 d2658555f4f95dc04bb975600fd95a54 189 PRINTS PR00097 Anthranilate synthase component II signature 2 16 5.0E-33 T 25-04-2016 SMA_RS02920 d2658555f4f95dc04bb975600fd95a54 189 PRINTS PR00097 Anthranilate synthase component II signature 45 54 5.0E-33 T 25-04-2016 SMA_RS02920 d2658555f4f95dc04bb975600fd95a54 189 PRINTS PR00097 Anthranilate synthase component II signature 72 83 5.0E-33 T 25-04-2016 SMA_RS02920 d2658555f4f95dc04bb975600fd95a54 189 PRINTS PR00097 Anthranilate synthase component II signature 97 105 5.0E-33 T 25-04-2016 SMA_RS02920 d2658555f4f95dc04bb975600fd95a54 189 Pfam PF00117 Glutamine amidotransferase class-I 3 183 5.4E-50 T 25-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 SMA_RS02620 9fe7ced01a245b189cbd0a27834138f3 177 Pfam PF04167 Protein of unknown function (DUF402) 60 124 4.8E-17 T 25-04-2016 IPR007295 Domain of unknown function DUF402 SMA_RS02620 9fe7ced01a245b189cbd0a27834138f3 177 SUPERFAMILY SSF159234 3 170 1.96E-32 T 25-04-2016 SMA_RS02620 9fe7ced01a245b189cbd0a27834138f3 177 PANTHER PTHR39159 1 176 2.0E-71 T 25-04-2016 SMA_RS02620 9fe7ced01a245b189cbd0a27834138f3 177 PANTHER PTHR39159:SF1 1 176 2.0E-71 T 25-04-2016 SMA_RS02620 9fe7ced01a245b189cbd0a27834138f3 177 PIRSF PIRSF028345 1 177 2.8E-76 T 25-04-2016 IPR016882 Uncharacterised protein family UPF0374 SMA_RS02620 9fe7ced01a245b189cbd0a27834138f3 177 Gene3D G3DSA:2.40.380.10 4 170 3.1E-46 T 25-04-2016 IPR007295 Domain of unknown function DUF402 SMA_RS02620 9fe7ced01a245b189cbd0a27834138f3 177 Hamap MF_01568 UPF0374 protein . 1 175 49.234 T 25-04-2016 IPR016882 Uncharacterised protein family UPF0374 SMA_RS07210 d00a3748312dc86d8ab9d92d263abc85 215 Pfam PF01634 ATP phosphoribosyltransferase 54 204 1.8E-50 T 25-04-2016 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 SMA_RS07210 d00a3748312dc86d8ab9d92d263abc85 215 Gene3D G3DSA:3.40.190.10 4 143 1.1E-43 T 25-04-2016 SMA_RS07210 d00a3748312dc86d8ab9d92d263abc85 215 SUPERFAMILY SSF53850 2 200 9.15E-66 T 25-04-2016 SMA_RS07210 d00a3748312dc86d8ab9d92d263abc85 215 PANTHER PTHR21403 1 211 1.8E-88 T 25-04-2016 IPR001348 ATP phosphoribosyltransferase HisG GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 SMA_RS07210 d00a3748312dc86d8ab9d92d263abc85 215 Hamap MF_01018 ATP phosphoribosyltransferase [hisG]. 4 208 57.67 T 25-04-2016 IPR024893 ATP phosphoribosyltransferase HisG, short form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 SMA_RS07210 d00a3748312dc86d8ab9d92d263abc85 215 PANTHER PTHR21403:SF3 1 211 1.8E-88 T 25-04-2016 SMA_RS07210 d00a3748312dc86d8ab9d92d263abc85 215 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 5 185 9.9E-64 T 25-04-2016 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 SMA_RS07210 d00a3748312dc86d8ab9d92d263abc85 215 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 144 165 - T 25-04-2016 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 SMA_RS06810 19ac6845284f6cd483031f1744d4d969 471 Pfam PF11799 impB/mucB/samB family C-terminal domain 295 403 2.7E-13 T 25-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SMA_RS06810 19ac6845284f6cd483031f1744d4d969 471 SUPERFAMILY SSF100879 302 399 1.63E-7 T 25-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SMA_RS06810 19ac6845284f6cd483031f1744d4d969 471 Pfam PF11798 IMS family HHH motif 223 255 1.0E-8 T 25-04-2016 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SMA_RS06810 19ac6845284f6cd483031f1744d4d969 471 Gene3D G3DSA:3.30.1490.100 304 406 2.3E-7 T 25-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SMA_RS06810 19ac6845284f6cd483031f1744d4d969 471 Pfam PF00817 impB/mucB/samB family 17 207 1.2E-14 T 25-04-2016 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SMA_RS06810 19ac6845284f6cd483031f1744d4d969 471 PANTHER PTHR11076:SF31 13 76 3.9E-87 T 25-04-2016 SMA_RS06810 19ac6845284f6cd483031f1744d4d969 471 PANTHER PTHR11076:SF31 106 433 3.9E-87 T 25-04-2016 SMA_RS06810 19ac6845284f6cd483031f1744d4d969 471 PANTHER PTHR11076 13 76 3.9E-87 T 25-04-2016 SMA_RS06810 19ac6845284f6cd483031f1744d4d969 471 PANTHER PTHR11076 106 433 3.9E-87 T 25-04-2016 SMA_RS06810 19ac6845284f6cd483031f1744d4d969 471 Gene3D G3DSA:3.30.70.270 111 209 1.1E-13 T 25-04-2016 SMA_RS06810 19ac6845284f6cd483031f1744d4d969 471 SUPERFAMILY SSF56672 4 83 6.67E-49 T 25-04-2016 SMA_RS06810 19ac6845284f6cd483031f1744d4d969 471 SUPERFAMILY SSF56672 116 292 6.67E-49 T 25-04-2016 SMA_RS06810 19ac6845284f6cd483031f1744d4d969 471 Gene3D G3DSA:1.10.150.20 221 293 2.1E-25 T 25-04-2016 SMA_RS06825 a1c82c642578ab186bb636f33ba4e743 116 Pfam PF00239 Resolvase, N terminal domain 5 106 1.4E-8 T 25-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 SMA_RS06825 a1c82c642578ab186bb636f33ba4e743 116 SUPERFAMILY SSF53041 4 107 1.16E-9 T 25-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 SMA_RS06825 a1c82c642578ab186bb636f33ba4e743 116 Gene3D G3DSA:3.40.50.1390 3 107 3.4E-8 T 25-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 SMA_RS05310 33f633ab1c9ae650aea62da446265827 217 Pfam PF01895 PhoU domain 121 206 7.7E-20 T 25-04-2016 IPR026022 PhoU domain SMA_RS05310 33f633ab1c9ae650aea62da446265827 217 Pfam PF01895 PhoU domain 19 104 4.2E-23 T 25-04-2016 IPR026022 PhoU domain SMA_RS05310 33f633ab1c9ae650aea62da446265827 217 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 4 215 5.7E-78 T 25-04-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 SMA_RS05310 33f633ab1c9ae650aea62da446265827 217 Gene3D G3DSA:1.20.58.220 3 107 7.8E-35 T 25-04-2016 SMA_RS05310 33f633ab1c9ae650aea62da446265827 217 PANTHER PTHR10010 1 216 1.9E-59 T 25-04-2016 SMA_RS05310 33f633ab1c9ae650aea62da446265827 217 PIRSF PIRSF003107 1 217 1.1E-65 T 25-04-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 SMA_RS05310 33f633ab1c9ae650aea62da446265827 217 SUPERFAMILY SSF109755 3 216 1.78E-67 T 25-04-2016 SMA_RS05310 33f633ab1c9ae650aea62da446265827 217 Gene3D G3DSA:1.20.58.220 108 216 2.7E-31 T 25-04-2016 SMA_RS05310 33f633ab1c9ae650aea62da446265827 217 PANTHER PTHR10010:SF14 1 216 1.9E-59 T 25-04-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 SMA_RS01385 7dd077f7ed9b6e45263b96ced4c9711a 126 Pfam PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 6 106 1.4E-9 T 25-04-2016 SMA_RS01385 7dd077f7ed9b6e45263b96ced4c9711a 126 PANTHER PTHR36113 3 126 7.2E-49 T 25-04-2016 SMA_RS01385 7dd077f7ed9b6e45263b96ced4c9711a 126 PANTHER PTHR36113:SF1 3 126 7.2E-49 T 25-04-2016 SMA_RS01385 7dd077f7ed9b6e45263b96ced4c9711a 126 Gene3D G3DSA:3.10.180.10 1 125 2.8E-35 T 25-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SMA_RS01385 7dd077f7ed9b6e45263b96ced4c9711a 126 SUPERFAMILY SSF54593 2 125 6.98E-24 T 25-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SMA_RS07640 e2e8a3569817c1fdbe1210d889cd001c 450 Gene3D G3DSA:3.30.565.10 262 439 3.3E-51 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMA_RS07640 e2e8a3569817c1fdbe1210d889cd001c 450 SMART SM00091 94 160 1.3E-7 T 25-04-2016 IPR000014 PAS domain SMA_RS07640 e2e8a3569817c1fdbe1210d889cd001c 450 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 91 208 1.1E-7 T 25-04-2016 IPR000014 PAS domain SMA_RS07640 e2e8a3569817c1fdbe1210d889cd001c 450 PANTHER PTHR24423:SF568 77 450 3.8E-182 T 25-04-2016 SMA_RS07640 e2e8a3569817c1fdbe1210d889cd001c 450 SUPERFAMILY SSF55785 83 200 9.77E-14 T 25-04-2016 IPR000014 PAS domain SMA_RS07640 e2e8a3569817c1fdbe1210d889cd001c 450 SUPERFAMILY SSF55874 263 435 1.44E-47 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMA_RS07640 e2e8a3569817c1fdbe1210d889cd001c 450 PANTHER PTHR24423 77 450 3.8E-182 T 25-04-2016 SMA_RS07640 e2e8a3569817c1fdbe1210d889cd001c 450 PRINTS PR00344 Bacterial sensor protein C-terminal signature 380 390 1.4E-19 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMA_RS07640 e2e8a3569817c1fdbe1210d889cd001c 450 PRINTS PR00344 Bacterial sensor protein C-terminal signature 421 434 1.4E-19 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMA_RS07640 e2e8a3569817c1fdbe1210d889cd001c 450 PRINTS PR00344 Bacterial sensor protein C-terminal signature 397 415 1.4E-19 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMA_RS07640 e2e8a3569817c1fdbe1210d889cd001c 450 PRINTS PR00344 Bacterial sensor protein C-terminal signature 362 376 1.4E-19 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMA_RS07640 e2e8a3569817c1fdbe1210d889cd001c 450 SMART SM00387 325 437 3.8E-41 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMA_RS07640 e2e8a3569817c1fdbe1210d889cd001c 450 Gene3D G3DSA:1.10.287.130 202 261 2.7E-19 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMA_RS07640 e2e8a3569817c1fdbe1210d889cd001c 450 SMART SM00388 208 274 6.0E-19 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMA_RS07640 e2e8a3569817c1fdbe1210d889cd001c 450 Pfam PF00512 His Kinase A (phospho-acceptor) domain 209 273 1.8E-16 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMA_RS07640 e2e8a3569817c1fdbe1210d889cd001c 450 Gene3D G3DSA:3.30.450.20 85 201 6.8E-12 T 25-04-2016 SMA_RS07640 e2e8a3569817c1fdbe1210d889cd001c 450 SUPERFAMILY SSF47384 194 274 1.41E-18 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMA_RS07640 e2e8a3569817c1fdbe1210d889cd001c 450 Pfam PF00989 PAS fold 95 189 2.7E-8 T 25-04-2016 IPR013767 PAS fold GO:0006355 SMA_RS07640 e2e8a3569817c1fdbe1210d889cd001c 450 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 326 436 1.1E-27 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMA_RS04190 c1f19eb72477ff18fca4df2e3ddfc6c7 929 PANTHER PTHR24093 817 927 2.8E-304 T 25-04-2016 SMA_RS04190 c1f19eb72477ff18fca4df2e3ddfc6c7 929 PANTHER PTHR24093 9 794 2.8E-304 T 25-04-2016 SMA_RS04190 c1f19eb72477ff18fca4df2e3ddfc6c7 929 Pfam PF00689 Cation transporting ATPase, C-terminus 742 926 1.2E-47 T 25-04-2016 IPR006068 Cation-transporting P-type ATPase, C-terminal SMA_RS04190 c1f19eb72477ff18fca4df2e3ddfc6c7 929 PANTHER PTHR24093:SF268 817 927 2.8E-304 T 25-04-2016 SMA_RS04190 c1f19eb72477ff18fca4df2e3ddfc6c7 929 PANTHER PTHR24093:SF268 9 794 2.8E-304 T 25-04-2016 SMA_RS04190 c1f19eb72477ff18fca4df2e3ddfc6c7 929 Pfam PF00122 E1-E2 ATPase 92 326 1.8E-70 T 25-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 SMA_RS04190 c1f19eb72477ff18fca4df2e3ddfc6c7 929 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 630 736 3.5E-33 T 25-04-2016 IPR001757 P-type ATPase GO:0016021 SMA_RS04190 c1f19eb72477ff18fca4df2e3ddfc6c7 929 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 92 354 8.2E-42 T 25-04-2016 IPR001757 P-type ATPase GO:0016021 SMA_RS04190 c1f19eb72477ff18fca4df2e3ddfc6c7 929 PRINTS PR00121 Sodium/potassium-transporting ATPase signature 799 819 2.0E-22 T 25-04-2016 SMA_RS04190 c1f19eb72477ff18fca4df2e3ddfc6c7 929 PRINTS PR00121 Sodium/potassium-transporting ATPase signature 730 751 2.0E-22 T 25-04-2016 SMA_RS04190 c1f19eb72477ff18fca4df2e3ddfc6c7 929 PRINTS PR00121 Sodium/potassium-transporting ATPase signature 328 349 2.0E-22 T 25-04-2016 SMA_RS04190 c1f19eb72477ff18fca4df2e3ddfc6c7 929 PRINTS PR00121 Sodium/potassium-transporting ATPase signature 73 87 2.0E-22 T 25-04-2016 SMA_RS04190 c1f19eb72477ff18fca4df2e3ddfc6c7 929 PRINTS PR00121 Sodium/potassium-transporting ATPase signature 474 492 2.0E-22 T 25-04-2016 SMA_RS04190 c1f19eb72477ff18fca4df2e3ddfc6c7 929 PRINTS PR00121 Sodium/potassium-transporting ATPase signature 254 276 2.0E-22 T 25-04-2016 SMA_RS04190 c1f19eb72477ff18fca4df2e3ddfc6c7 929 Gene3D G3DSA:3.40.1110.10 325 560 6.5E-60 T 25-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 SMA_RS04190 c1f19eb72477ff18fca4df2e3ddfc6c7 929 SUPERFAMILY SSF81660 342 557 6.32E-50 T 25-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 SMA_RS04190 c1f19eb72477ff18fca4df2e3ddfc6c7 929 Gene3D G3DSA:2.70.150.10 29 65 4.6E-45 T 25-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 SMA_RS04190 c1f19eb72477ff18fca4df2e3ddfc6c7 929 Gene3D G3DSA:2.70.150.10 119 233 4.6E-45 T 25-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 SMA_RS04190 c1f19eb72477ff18fca4df2e3ddfc6c7 929 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 680 692 7.2E-41 T 25-04-2016 SMA_RS04190 c1f19eb72477ff18fca4df2e3ddfc6c7 929 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 656 675 7.2E-41 T 25-04-2016 SMA_RS04190 c1f19eb72477ff18fca4df2e3ddfc6c7 929 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 553 564 7.2E-41 T 25-04-2016 SMA_RS04190 c1f19eb72477ff18fca4df2e3ddfc6c7 929 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 575 585 7.2E-41 T 25-04-2016 SMA_RS04190 c1f19eb72477ff18fca4df2e3ddfc6c7 929 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 335 349 7.2E-41 T 25-04-2016 SMA_RS04190 c1f19eb72477ff18fca4df2e3ddfc6c7 929 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 171 185 7.2E-41 T 25-04-2016 SMA_RS04190 c1f19eb72477ff18fca4df2e3ddfc6c7 929 SUPERFAMILY SSF81653 123 233 3.27E-31 T 25-04-2016 SMA_RS04190 c1f19eb72477ff18fca4df2e3ddfc6c7 929 SUPERFAMILY SSF81665 706 927 4.18E-109 T 25-04-2016 SMA_RS04190 c1f19eb72477ff18fca4df2e3ddfc6c7 929 SUPERFAMILY SSF81665 15 124 4.18E-109 T 25-04-2016 SMA_RS04190 c1f19eb72477ff18fca4df2e3ddfc6c7 929 SUPERFAMILY SSF81665 235 329 4.18E-109 T 25-04-2016 SMA_RS04190 c1f19eb72477ff18fca4df2e3ddfc6c7 929 SUPERFAMILY SSF56784 333 353 5.34E-63 T 25-04-2016 IPR023214 HAD-like domain SMA_RS04190 c1f19eb72477ff18fca4df2e3ddfc6c7 929 SUPERFAMILY SSF56784 504 763 5.34E-63 T 25-04-2016 IPR023214 HAD-like domain SMA_RS04190 c1f19eb72477ff18fca4df2e3ddfc6c7 929 Pfam PF00702 haloacid dehalogenase-like hydrolase 333 670 4.7E-17 T 25-04-2016 SMA_RS04190 c1f19eb72477ff18fca4df2e3ddfc6c7 929 Pfam PF00690 Cation transporter/ATPase, N-terminus 19 80 7.3E-15 T 25-04-2016 IPR004014 Cation-transporting P-type ATPase, N-terminal SMA_RS04190 c1f19eb72477ff18fca4df2e3ddfc6c7 929 SMART SM00831 13 86 4.4E-11 T 25-04-2016 IPR004014 Cation-transporting P-type ATPase, N-terminal SMA_RS04190 c1f19eb72477ff18fca4df2e3ddfc6c7 929 Gene3D G3DSA:1.20.1110.10 625 926 8.7E-95 T 25-04-2016 IPR023298 P-type ATPase, transmembrane domain SMA_RS04190 c1f19eb72477ff18fca4df2e3ddfc6c7 929 Gene3D G3DSA:1.20.1110.10 66 118 8.7E-95 T 25-04-2016 IPR023298 P-type ATPase, transmembrane domain SMA_RS04190 c1f19eb72477ff18fca4df2e3ddfc6c7 929 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 337 343 - T 25-04-2016 IPR018303 P-type ATPase, phosphorylation site SMA_RS08450 8e5157a600d686ff20b6b9164333d634 300 PANTHER PTHR30050 27 300 4.3E-78 T 25-04-2016 SMA_RS08450 8e5157a600d686ff20b6b9164333d634 300 PANTHER PTHR30050:SF8 27 300 4.3E-78 T 25-04-2016 SMA_RS08450 8e5157a600d686ff20b6b9164333d634 300 Gene3D G3DSA:3.40.50.300 102 289 1.1E-33 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS08450 8e5157a600d686ff20b6b9164333d634 300 Pfam PF07319 Primosomal protein DnaI N-terminus 1 90 6.8E-23 T 25-04-2016 IPR009928 Primosomal DnaI, N-terminal SMA_RS08450 8e5157a600d686ff20b6b9164333d634 300 SUPERFAMILY SSF52540 122 267 2.76E-19 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS08450 8e5157a600d686ff20b6b9164333d634 300 Pfam PF01695 IstB-like ATP binding protein 151 268 3.6E-10 T 25-04-2016 IPR002611 IstB-like ATP-binding protein GO:0005524 SMA_RS09140 1b2ae43d5f4f2aeb7fc83a4b7f006d4a 560 PANTHER PTHR11203 2 560 5.0E-237 T 25-04-2016 SMA_RS09140 1b2ae43d5f4f2aeb7fc83a4b7f006d4a 560 PIRSF PIRSF004803 2 557 1.5E-222 T 25-04-2016 IPR030854 Ribonuclease J, bacteria GO:0004521|GO:0004534|GO:0006396|GO:0008270|GO:0090501 SMA_RS09140 1b2ae43d5f4f2aeb7fc83a4b7f006d4a 560 TIGRFAM TIGR00649 MG423: beta-CASP ribonuclease, RNase J family 12 554 2.9E-195 T 25-04-2016 IPR004613 Ribonuclease J GO:0003723|GO:0046872 SMA_RS09140 1b2ae43d5f4f2aeb7fc83a4b7f006d4a 560 Gene3D G3DSA:3.60.15.10 9 257 1.6E-77 T 25-04-2016 IPR001279 Metallo-beta-lactamase SMA_RS09140 1b2ae43d5f4f2aeb7fc83a4b7f006d4a 560 Hamap MF_01491 Ribonuclease J [rnj]. 6 557 45.383 T 25-04-2016 IPR030854 Ribonuclease J, bacteria GO:0004521|GO:0004534|GO:0006396|GO:0008270|GO:0090501 SMA_RS09140 1b2ae43d5f4f2aeb7fc83a4b7f006d4a 560 PANTHER PTHR11203:SF22 2 560 5.0E-237 T 25-04-2016 IPR004613 Ribonuclease J GO:0003723|GO:0046872 SMA_RS09140 1b2ae43d5f4f2aeb7fc83a4b7f006d4a 560 SMART SM00849 23 217 2.8E-24 T 25-04-2016 IPR001279 Metallo-beta-lactamase SMA_RS09140 1b2ae43d5f4f2aeb7fc83a4b7f006d4a 560 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 360 409 7.8E-11 T 25-04-2016 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain SMA_RS09140 1b2ae43d5f4f2aeb7fc83a4b7f006d4a 560 ProSitePatterns PS01292 Uncharacterized protein family UPF0036 signature. 366 394 - T 25-04-2016 IPR001587 Ribonuclease J, conserved site SMA_RS09140 1b2ae43d5f4f2aeb7fc83a4b7f006d4a 560 SUPERFAMILY SSF56281 13 425 7.49E-92 T 25-04-2016 IPR001279 Metallo-beta-lactamase SMA_RS09140 1b2ae43d5f4f2aeb7fc83a4b7f006d4a 560 Pfam PF00753 Metallo-beta-lactamase superfamily 21 169 6.2E-17 T 25-04-2016 IPR001279 Metallo-beta-lactamase SMA_RS08370 b1a8a0dc0f01dca24cde9420263286bf 306 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 60 248 2.0E-42 T 25-04-2016 IPR028055 Membrane insertase YidC/Oxa1, C-terminal SMA_RS08370 b1a8a0dc0f01dca24cde9420263286bf 306 PANTHER PTHR12428 26 302 1.7E-81 T 25-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 SMA_RS08370 b1a8a0dc0f01dca24cde9420263286bf 306 Pfam PF02096 60Kd inner membrane protein 60 248 1.8E-40 T 25-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 SMA_RS08370 b1a8a0dc0f01dca24cde9420263286bf 306 PANTHER PTHR12428:SF20 26 302 1.7E-81 T 25-04-2016 SMA_RS08370 b1a8a0dc0f01dca24cde9420263286bf 306 Hamap MF_01811 Membrane protein insertase YidC [yidC]. 2 252 27.544 T 25-04-2016 IPR023060 Membrane insertase YidC/YidC1/YidC2, Firmicutes SMA_RS05680 470ad33e5d8c92588d7fc2b1f0568a09 401 Pfam PF14659 Phage integrase, N-terminal SAM-like domain 78 131 5.9E-5 T 25-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 SMA_RS05680 470ad33e5d8c92588d7fc2b1f0568a09 401 PANTHER PTHR30349:SF35 11 395 7.1E-39 T 25-04-2016 SMA_RS05680 470ad33e5d8c92588d7fc2b1f0568a09 401 SUPERFAMILY SSF56349 78 367 1.0E-51 T 25-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 SMA_RS05680 470ad33e5d8c92588d7fc2b1f0568a09 401 Pfam PF00589 Phage integrase family 208 365 9.2E-21 T 25-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 SMA_RS05680 470ad33e5d8c92588d7fc2b1f0568a09 401 Gene3D G3DSA:1.10.443.10 183 367 2.1E-30 T 25-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 SMA_RS05680 470ad33e5d8c92588d7fc2b1f0568a09 401 PANTHER PTHR30349 11 395 7.1E-39 T 25-04-2016 SMA_RS05680 470ad33e5d8c92588d7fc2b1f0568a09 401 Gene3D G3DSA:1.10.150.130 78 176 1.2E-11 T 25-04-2016 IPR023109 Integrase/recombinase, N-terminal SMA_RS06010 8aa1c27a7335e63e63251444d3d907b8 604 PANTHER PTHR24221 1 277 1.6E-148 T 25-04-2016 SMA_RS06010 8aa1c27a7335e63e63251444d3d907b8 604 PANTHER PTHR24221 294 603 1.6E-148 T 25-04-2016 SMA_RS06010 8aa1c27a7335e63e63251444d3d907b8 604 Pfam PF00664 ABC transporter transmembrane region 17 271 6.1E-25 T 25-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SMA_RS06010 8aa1c27a7335e63e63251444d3d907b8 604 SUPERFAMILY SSF90123 5 336 4.97E-51 T 25-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SMA_RS06010 8aa1c27a7335e63e63251444d3d907b8 604 ProSitePatterns PS00211 ABC transporters family signature. 496 510 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SMA_RS06010 8aa1c27a7335e63e63251444d3d907b8 604 SMART SM00382 381 576 1.5E-13 T 25-04-2016 IPR003593 AAA+ ATPase domain SMA_RS06010 8aa1c27a7335e63e63251444d3d907b8 604 Pfam PF00005 ABC transporter 372 522 2.1E-30 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMA_RS06010 8aa1c27a7335e63e63251444d3d907b8 604 Gene3D G3DSA:1.20.1560.10 5 336 7.5E-46 T 25-04-2016 SMA_RS06010 8aa1c27a7335e63e63251444d3d907b8 604 Gene3D G3DSA:3.40.50.300 354 589 1.7E-70 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS06010 8aa1c27a7335e63e63251444d3d907b8 604 SUPERFAMILY SSF52540 348 594 3.04E-80 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS03145 b7e69496fc3f2110fc52069b873a48fb 442 PANTHER PTHR30008:SF0 1 441 1.6E-158 T 25-04-2016 SMA_RS03145 b7e69496fc3f2110fc52069b873a48fb 442 Pfam PF02601 Exonuclease VII, large subunit 122 436 3.1E-98 T 25-04-2016 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 SMA_RS03145 b7e69496fc3f2110fc52069b873a48fb 442 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 2 439 28.58 T 25-04-2016 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 SMA_RS03145 b7e69496fc3f2110fc52069b873a48fb 442 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 6 349 2.8E-129 T 25-04-2016 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 SMA_RS03145 b7e69496fc3f2110fc52069b873a48fb 442 Pfam PF13742 OB-fold nucleic acid binding domain 5 97 7.9E-25 T 25-04-2016 IPR025824 OB-fold nucleic acid binding domain GO:0003676 SMA_RS03145 b7e69496fc3f2110fc52069b873a48fb 442 PANTHER PTHR30008 1 441 1.6E-158 T 25-04-2016 SMA_RS08165 10d23e65245f4d3439cf93d8c6b3990a 333 Pfam PF01032 FecCD transport family 17 331 4.3E-86 T 25-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 SMA_RS08165 10d23e65245f4d3439cf93d8c6b3990a 333 PANTHER PTHR30472 13 332 9.1E-93 T 25-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 SMA_RS08165 10d23e65245f4d3439cf93d8c6b3990a 333 Gene3D G3DSA:1.10.3470.10 8 332 5.8E-87 T 25-04-2016 IPR029022 ABC transporter, BtuC-like SMA_RS08165 10d23e65245f4d3439cf93d8c6b3990a 333 SUPERFAMILY SSF81345 8 331 1.57E-72 T 25-04-2016 IPR029022 ABC transporter, BtuC-like SMA_RS08165 10d23e65245f4d3439cf93d8c6b3990a 333 PANTHER PTHR30472:SF16 13 332 9.1E-93 T 25-04-2016 SMA_RS07415 dbf4fd088c30acaae3dc33043ab50cb2 398 PANTHER PTHR23115:SF112 1 397 3.0E-244 T 25-04-2016 SMA_RS07415 dbf4fd088c30acaae3dc33043ab50cb2 398 PRINTS PR00315 GTP-binding elongation factor signature 14 27 2.0E-25 T 25-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SMA_RS07415 dbf4fd088c30acaae3dc33043ab50cb2 398 PRINTS PR00315 GTP-binding elongation factor signature 61 69 2.0E-25 T 25-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SMA_RS07415 dbf4fd088c30acaae3dc33043ab50cb2 398 PRINTS PR00315 GTP-binding elongation factor signature 81 91 2.0E-25 T 25-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SMA_RS07415 dbf4fd088c30acaae3dc33043ab50cb2 398 PRINTS PR00315 GTP-binding elongation factor signature 97 108 2.0E-25 T 25-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SMA_RS07415 dbf4fd088c30acaae3dc33043ab50cb2 398 PRINTS PR00315 GTP-binding elongation factor signature 134 143 2.0E-25 T 25-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SMA_RS07415 dbf4fd088c30acaae3dc33043ab50cb2 398 PANTHER PTHR23115 1 397 3.0E-244 T 25-04-2016 SMA_RS07415 dbf4fd088c30acaae3dc33043ab50cb2 398 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 398 59.414 T 25-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 SMA_RS07415 dbf4fd088c30acaae3dc33043ab50cb2 398 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 149 2.7E-13 T 25-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 SMA_RS07415 dbf4fd088c30acaae3dc33043ab50cb2 398 Pfam PF03143 Elongation factor Tu C-terminal domain 302 396 7.2E-32 T 25-04-2016 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal SMA_RS07415 dbf4fd088c30acaae3dc33043ab50cb2 398 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 54 69 - T 25-04-2016 IPR031157 Tr-type G domain, conserved site SMA_RS07415 dbf4fd088c30acaae3dc33043ab50cb2 398 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 396 9.3E-222 T 25-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 SMA_RS07415 dbf4fd088c30acaae3dc33043ab50cb2 398 Gene3D G3DSA:3.40.50.300 3 211 3.4E-72 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS07415 dbf4fd088c30acaae3dc33043ab50cb2 398 Pfam PF00009 Elongation factor Tu GTP binding domain 10 204 6.8E-59 T 25-04-2016 SMA_RS07415 dbf4fd088c30acaae3dc33043ab50cb2 398 SUPERFAMILY SSF50447 208 305 3.95E-29 T 25-04-2016 IPR009000 Translation protein, beta-barrel domain SMA_RS07415 dbf4fd088c30acaae3dc33043ab50cb2 398 SUPERFAMILY SSF50465 306 397 2.36E-35 T 25-04-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal SMA_RS07415 dbf4fd088c30acaae3dc33043ab50cb2 398 SUPERFAMILY SSF52540 6 222 7.71E-61 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS07415 dbf4fd088c30acaae3dc33043ab50cb2 398 Pfam PF03144 Elongation factor Tu domain 2 228 297 1.3E-16 T 25-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 SMA_RS07415 dbf4fd088c30acaae3dc33043ab50cb2 398 Gene3D G3DSA:2.40.30.10 212 302 5.8E-38 T 25-04-2016 SMA_RS07415 dbf4fd088c30acaae3dc33043ab50cb2 398 Gene3D G3DSA:2.40.30.10 305 396 3.4E-45 T 25-04-2016 SMA_RS05880 113f4bd4c52afa1ef85b426410669ce5 187 Gene3D G3DSA:3.40.190.10 127 183 2.3E-10 T 25-04-2016 SMA_RS05880 113f4bd4c52afa1ef85b426410669ce5 187 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 44 180 2.9E-26 T 25-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SMA_RS05880 113f4bd4c52afa1ef85b426410669ce5 187 Gene3D G3DSA:3.40.190.10 42 126 1.6E-19 T 25-04-2016 SMA_RS05880 113f4bd4c52afa1ef85b426410669ce5 187 SUPERFAMILY SSF53850 4 174 4.44E-25 T 25-04-2016 SMA_RS01315 efba334bb3aabc2904736a2d1b2060f7 489 PANTHER PTHR39191 1 489 2.4E-187 T 25-04-2016 SMA_RS01315 efba334bb3aabc2904736a2d1b2060f7 489 TIGRFAM TIGR01239 galT_2: galactose-1-phosphate uridylyltransferase 4 486 5.6E-229 T 25-04-2016 IPR000766 Galactose-1-phosphate uridyl transferase, class II GO:0005737|GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 SMA_RS01315 efba334bb3aabc2904736a2d1b2060f7 489 ProSitePatterns PS01163 Galactose-1-phosphate uridyl transferase family 2 signature. 252 269 - T 25-04-2016 IPR023425 Galactose-1-phosphate uridyl transferase, class II, conserved site GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 SMA_RS01315 efba334bb3aabc2904736a2d1b2060f7 489 PIRSF PIRSF006005 1 489 2.5E-235 T 25-04-2016 IPR000766 Galactose-1-phosphate uridyl transferase, class II GO:0005737|GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 SMA_RS01315 efba334bb3aabc2904736a2d1b2060f7 489 Pfam PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain 239 434 7.6E-43 T 25-04-2016 IPR005850 Galactose-1-phosphate uridyl transferase, C-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 SMA_RS01315 efba334bb3aabc2904736a2d1b2060f7 489 Pfam PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain 16 224 3.7E-41 T 25-04-2016 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 SMA_RS01315 efba334bb3aabc2904736a2d1b2060f7 489 Hamap MF_00571 Galactose-1-phosphate uridylyltransferase [galT]. 1 489 275.2 T 25-04-2016 IPR000766 Galactose-1-phosphate uridyl transferase, class II GO:0005737|GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 SMA_RS01315 efba334bb3aabc2904736a2d1b2060f7 489 PANTHER PTHR39191:SF1 1 489 2.4E-187 T 25-04-2016 SMA_RS00075 b8605528564a1afb75e8be8ff9678d84 259 PANTHER PTHR33055:SF3 1 15 8.8E-29 T 25-04-2016 SMA_RS00075 b8605528564a1afb75e8be8ff9678d84 259 PANTHER PTHR33055:SF3 67 252 8.8E-29 T 25-04-2016 SMA_RS00075 b8605528564a1afb75e8be8ff9678d84 259 PANTHER PTHR33055 1 15 8.8E-29 T 25-04-2016 SMA_RS00075 b8605528564a1afb75e8be8ff9678d84 259 PANTHER PTHR33055 67 252 8.8E-29 T 25-04-2016 SMA_RS00075 b8605528564a1afb75e8be8ff9678d84 259 Pfam PF02371 Transposase IS116/IS110/IS902 family 126 214 4.0E-21 T 25-04-2016 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 SMA_RS05375 284ec0329bec4adb63de44cdd8df1475 252 PANTHER PTHR20854 1 238 1.2E-50 T 25-04-2016 IPR000760 Inositol monophosphatase GO:0046854 SMA_RS05375 284ec0329bec4adb63de44cdd8df1475 252 Gene3D G3DSA:3.40.190.80 156 242 2.2E-17 T 25-04-2016 SMA_RS05375 284ec0329bec4adb63de44cdd8df1475 252 Pfam PF00459 Inositol monophosphatase family 6 233 4.9E-37 T 25-04-2016 IPR000760 Inositol monophosphatase GO:0046854 SMA_RS05375 284ec0329bec4adb63de44cdd8df1475 252 PANTHER PTHR20854:SF4 1 238 1.2E-50 T 25-04-2016 SMA_RS05375 284ec0329bec4adb63de44cdd8df1475 252 PRINTS PR00377 Inositol monophosphatase superfamily signature 201 225 7.0E-23 T 25-04-2016 IPR000760 Inositol monophosphatase GO:0046854 SMA_RS05375 284ec0329bec4adb63de44cdd8df1475 252 PRINTS PR00377 Inositol monophosphatase superfamily signature 80 96 7.0E-23 T 25-04-2016 IPR000760 Inositol monophosphatase GO:0046854 SMA_RS05375 284ec0329bec4adb63de44cdd8df1475 252 PRINTS PR00377 Inositol monophosphatase superfamily signature 171 192 7.0E-23 T 25-04-2016 IPR000760 Inositol monophosphatase GO:0046854 SMA_RS05375 284ec0329bec4adb63de44cdd8df1475 252 PRINTS PR00377 Inositol monophosphatase superfamily signature 37 57 7.0E-23 T 25-04-2016 IPR000760 Inositol monophosphatase GO:0046854 SMA_RS05375 284ec0329bec4adb63de44cdd8df1475 252 PRINTS PR00377 Inositol monophosphatase superfamily signature 59 75 7.0E-23 T 25-04-2016 IPR000760 Inositol monophosphatase GO:0046854 SMA_RS05375 284ec0329bec4adb63de44cdd8df1475 252 SUPERFAMILY SSF56655 3 237 1.1E-56 T 25-04-2016 SMA_RS05375 284ec0329bec4adb63de44cdd8df1475 252 Gene3D G3DSA:3.30.540.10 3 155 2.4E-35 T 25-04-2016 SMA_RS06915 151ae1aa632b4d1005f0ac727a6dd30b 2273 Pfam PF02384 N-6 DNA Methylase 667 867 7.0E-10 T 25-04-2016 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 SMA_RS06915 151ae1aa632b4d1005f0ac727a6dd30b 2273 SUPERFAMILY SSF52540 1412 1561 9.7E-35 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS06915 151ae1aa632b4d1005f0ac727a6dd30b 2273 Gene3D G3DSA:3.40.50.150 678 866 1.3E-37 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMA_RS06915 151ae1aa632b4d1005f0ac727a6dd30b 2273 Pfam PF00176 SNF2 family N-terminal domain 1468 1790 1.5E-12 T 25-04-2016 IPR000330 SNF2-related, N-terminal domain GO:0005524 SMA_RS06915 151ae1aa632b4d1005f0ac727a6dd30b 2273 SMART SM00487 1447 1711 2.4E-16 T 25-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain SMA_RS06915 151ae1aa632b4d1005f0ac727a6dd30b 2273 SMART SM00490 1879 1969 0.0047 T 25-04-2016 IPR001650 Helicase, C-terminal SMA_RS06915 151ae1aa632b4d1005f0ac727a6dd30b 2273 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 763 775 1.9E-6 T 25-04-2016 SMA_RS06915 151ae1aa632b4d1005f0ac727a6dd30b 2273 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 702 716 1.9E-6 T 25-04-2016 SMA_RS06915 151ae1aa632b4d1005f0ac727a6dd30b 2273 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 787 811 1.9E-6 T 25-04-2016 SMA_RS06915 151ae1aa632b4d1005f0ac727a6dd30b 2273 Gene3D G3DSA:3.40.50.300 1451 1559 1.3E-23 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS06915 151ae1aa632b4d1005f0ac727a6dd30b 2273 Gene3D G3DSA:3.40.50.300 1616 1699 1.3E-23 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS06915 151ae1aa632b4d1005f0ac727a6dd30b 2273 Pfam PF00271 Helicase conserved C-terminal domain 1898 1969 1.8E-6 T 25-04-2016 IPR001650 Helicase, C-terminal SMA_RS06915 151ae1aa632b4d1005f0ac727a6dd30b 2273 Gene3D G3DSA:3.40.50.300 1874 2002 3.5E-14 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS06915 151ae1aa632b4d1005f0ac727a6dd30b 2273 SUPERFAMILY SSF53335 635 865 8.72E-34 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMA_RS06915 151ae1aa632b4d1005f0ac727a6dd30b 2273 SUPERFAMILY SSF52540 1612 1705 9.7E-35 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS06915 151ae1aa632b4d1005f0ac727a6dd30b 2273 SUPERFAMILY SSF52540 1770 2076 9.02E-30 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS08545 b7803dc89fbf624aa3ce858ecf3ed10c 230 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 44 228 5.0E-15 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SMA_RS08545 b7803dc89fbf624aa3ce858ecf3ed10c 230 Gene3D G3DSA:1.10.3720.10 25 228 5.5E-31 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SMA_RS08545 b7803dc89fbf624aa3ce858ecf3ed10c 230 SUPERFAMILY SSF161098 24 218 9.94E-34 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SMA_RS08545 b7803dc89fbf624aa3ce858ecf3ed10c 230 PANTHER PTHR30450:SF1 26 230 2.2E-74 T 25-04-2016 SMA_RS08545 b7803dc89fbf624aa3ce858ecf3ed10c 230 PANTHER PTHR30450 26 230 2.2E-74 T 25-04-2016 SMA_RS08350 f3a5d33ae614660b5147d389731b13bb 230 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 17 226 6.2E-54 T 25-04-2016 SMA_RS08350 f3a5d33ae614660b5147d389731b13bb 230 PANTHER PTHR23291:SF42 16 230 1.2E-68 T 25-04-2016 SMA_RS08350 f3a5d33ae614660b5147d389731b13bb 230 PANTHER PTHR23291 16 230 1.2E-68 T 25-04-2016 IPR006214 Bax inhibitor 1-related SMA_RS08820 114cad4403a08210db6442cb53f9a165 941 SUPERFAMILY SSF52540 618 913 4.15E-54 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS08820 114cad4403a08210db6442cb53f9a165 941 SUPERFAMILY SSF52540 10 205 1.09E-47 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS08820 114cad4403a08210db6442cb53f9a165 941 SUPERFAMILY SSF52540 432 571 1.09E-47 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS08820 114cad4403a08210db6442cb53f9a165 941 ProSitePatterns PS00211 ABC transporters family signature. 830 844 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SMA_RS08820 114cad4403a08210db6442cb53f9a165 941 ProSitePatterns PS00211 ABC transporters family signature. 489 503 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SMA_RS08820 114cad4403a08210db6442cb53f9a165 941 PANTHER PTHR32282:SF2 1 941 0.0 T 25-04-2016 SMA_RS08820 114cad4403a08210db6442cb53f9a165 941 Gene3D G3DSA:3.40.50.300 615 669 2.7E-61 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS08820 114cad4403a08210db6442cb53f9a165 941 Gene3D G3DSA:3.40.50.300 821 939 2.7E-61 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS08820 114cad4403a08210db6442cb53f9a165 941 Gene3D G3DSA:3.40.50.300 480 599 3.7E-56 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS08820 114cad4403a08210db6442cb53f9a165 941 Gene3D G3DSA:3.40.50.300 6 52 3.7E-56 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS08820 114cad4403a08210db6442cb53f9a165 941 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 4 925 0.0 T 25-04-2016 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 SMA_RS08820 114cad4403a08210db6442cb53f9a165 941 Pfam PF00005 ABC transporter 624 860 3.8E-11 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMA_RS08820 114cad4403a08210db6442cb53f9a165 941 SMART SM00382 633 908 1.9E-4 T 25-04-2016 IPR003593 AAA+ ATPase domain SMA_RS08820 114cad4403a08210db6442cb53f9a165 941 SMART SM00382 24 260 19.0 T 25-04-2016 IPR003593 AAA+ ATPase domain SMA_RS08820 114cad4403a08210db6442cb53f9a165 941 Hamap MF_00205 UvrABC system protein A [uvrA]. 2 940 22.754 T 25-04-2016 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 SMA_RS08820 114cad4403a08210db6442cb53f9a165 941 Gene3D G3DSA:1.20.1580.10 694 820 6.2E-57 T 25-04-2016 SMA_RS08820 114cad4403a08210db6442cb53f9a165 941 Gene3D G3DSA:1.20.1580.10 249 282 1.4E-49 T 25-04-2016 SMA_RS08820 114cad4403a08210db6442cb53f9a165 941 Gene3D G3DSA:1.20.1580.10 92 130 1.4E-49 T 25-04-2016 SMA_RS08820 114cad4403a08210db6442cb53f9a165 941 Gene3D G3DSA:1.20.1580.10 406 479 1.4E-49 T 25-04-2016 SMA_RS08820 114cad4403a08210db6442cb53f9a165 941 Gene3D G3DSA:3.30.1490.20 132 154 7.2E-30 T 25-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 SMA_RS08820 114cad4403a08210db6442cb53f9a165 941 Gene3D G3DSA:3.30.1490.20 201 248 7.2E-30 T 25-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 SMA_RS08820 114cad4403a08210db6442cb53f9a165 941 PANTHER PTHR32282 1 941 0.0 T 25-04-2016 SMA_RS08820 114cad4403a08210db6442cb53f9a165 941 Gene3D G3DSA:1.10.8.280 284 405 1.9E-42 T 25-04-2016 SMA_RS04065 316a3c4d3b095ba543d10feb1cf9cc91 148 SUPERFAMILY SSF46785 8 135 4.83E-27 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMA_RS04065 316a3c4d3b095ba543d10feb1cf9cc91 148 Pfam PF01047 MarR family 38 90 1.5E-7 T 25-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SMA_RS04065 316a3c4d3b095ba543d10feb1cf9cc91 148 PANTHER PTHR33164:SF4 11 135 1.2E-17 T 25-04-2016 SMA_RS04065 316a3c4d3b095ba543d10feb1cf9cc91 148 SMART SM00347 25 126 3.9E-17 T 25-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SMA_RS04065 316a3c4d3b095ba543d10feb1cf9cc91 148 PANTHER PTHR33164 11 135 1.2E-17 T 25-04-2016 SMA_RS04065 316a3c4d3b095ba543d10feb1cf9cc91 148 PRINTS PR00598 Bacterial regulatory protein MarR family signature 86 102 3.2E-8 T 25-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SMA_RS04065 316a3c4d3b095ba543d10feb1cf9cc91 148 PRINTS PR00598 Bacterial regulatory protein MarR family signature 50 66 3.2E-8 T 25-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SMA_RS04065 316a3c4d3b095ba543d10feb1cf9cc91 148 PRINTS PR00598 Bacterial regulatory protein MarR family signature 116 136 3.2E-8 T 25-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SMA_RS04065 316a3c4d3b095ba543d10feb1cf9cc91 148 Gene3D G3DSA:1.10.10.10 7 139 8.2E-34 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMA_RS00960 6b56833b9fda0c10d56437dff29caeac 237 PANTHER PTHR11537:SF137 1 222 1.0E-26 T 25-04-2016 SMA_RS00960 6b56833b9fda0c10d56437dff29caeac 237 Gene3D G3DSA:1.10.287.70 21 224 5.6E-40 T 25-04-2016 SMA_RS00960 6b56833b9fda0c10d56437dff29caeac 237 SUPERFAMILY SSF81324 25 225 3.7E-37 T 25-04-2016 SMA_RS00960 6b56833b9fda0c10d56437dff29caeac 237 PANTHER PTHR11537 1 222 1.0E-26 T 25-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 SMA_RS00960 6b56833b9fda0c10d56437dff29caeac 237 Pfam PF00520 Ion transport protein 21 227 1.5E-20 T 25-04-2016 IPR005821 Ion transport domain GO:0005216|GO:0006811|GO:0016020|GO:0055085 SMA_RS00960 6b56833b9fda0c10d56437dff29caeac 237 PRINTS PR00169 Potassium channel signature 114 140 1.3E-21 T 25-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 SMA_RS00960 6b56833b9fda0c10d56437dff29caeac 237 PRINTS PR00169 Potassium channel signature 170 192 1.3E-21 T 25-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 SMA_RS00960 6b56833b9fda0c10d56437dff29caeac 237 PRINTS PR00169 Potassium channel signature 13 41 1.3E-21 T 25-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 SMA_RS00960 6b56833b9fda0c10d56437dff29caeac 237 PRINTS PR00169 Potassium channel signature 199 225 1.3E-21 T 25-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 SMA_RS02345 2e629dc827cd1f4059cdde3b6eb2c132 416 Gene3D G3DSA:3.40.309.10 225 373 3.3E-44 T 25-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 SMA_RS02345 2e629dc827cd1f4059cdde3b6eb2c132 416 PIRSF PIRSF000151 1 416 2.6E-178 T 25-04-2016 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 SMA_RS02345 2e629dc827cd1f4059cdde3b6eb2c132 416 Pfam PF00171 Aldehyde dehydrogenase family 316 378 1.4E-7 T 25-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 SMA_RS02345 2e629dc827cd1f4059cdde3b6eb2c132 416 Pfam PF00171 Aldehyde dehydrogenase family 5 283 4.2E-15 T 25-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 SMA_RS02345 2e629dc827cd1f4059cdde3b6eb2c132 416 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 3 415 40.683 T 25-04-2016 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 SMA_RS02345 2e629dc827cd1f4059cdde3b6eb2c132 416 PANTHER PTHR11063:SF8 4 416 1.9E-173 T 25-04-2016 SMA_RS02345 2e629dc827cd1f4059cdde3b6eb2c132 416 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 11 405 2.2E-155 T 25-04-2016 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 SMA_RS02345 2e629dc827cd1f4059cdde3b6eb2c132 416 PANTHER PTHR11063 4 416 1.9E-173 T 25-04-2016 SMA_RS02345 2e629dc827cd1f4059cdde3b6eb2c132 416 SUPERFAMILY SSF53720 3 415 6.28E-114 T 25-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 SMA_RS02345 2e629dc827cd1f4059cdde3b6eb2c132 416 Gene3D G3DSA:3.40.605.10 374 415 4.9E-100 T 25-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 SMA_RS02345 2e629dc827cd1f4059cdde3b6eb2c132 416 Gene3D G3DSA:3.40.605.10 3 222 4.9E-100 T 25-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 SMA_RS10120 550ac4d4e86fad22f6b049e8b763414b 738 PANTHER PTHR21075 7 727 2.6E-272 T 25-04-2016 SMA_RS10120 550ac4d4e86fad22f6b049e8b763414b 738 Pfam PF03477 ATP cone domain 16 106 1.5E-20 T 25-04-2016 IPR005144 ATP-cone domain SMA_RS10120 550ac4d4e86fad22f6b049e8b763414b 738 Gene3D G3DSA:3.20.70.20 139 702 5.9E-185 T 25-04-2016 SMA_RS10120 550ac4d4e86fad22f6b049e8b763414b 738 SUPERFAMILY SSF51998 137 703 9.77E-195 T 25-04-2016 SMA_RS10120 550ac4d4e86fad22f6b049e8b763414b 738 Pfam PF13597 Anaerobic ribonucleoside-triphosphate reductase 132 721 2.1E-181 T 25-04-2016 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.17.4.2|KEGG: 00240+1.17.4.2|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 SMA_RS10120 550ac4d4e86fad22f6b049e8b763414b 738 ProSitePatterns PS00850 Glycine radical domain signature. 692 700 - T 25-04-2016 IPR019777 Formate C-acetyltransferase glycine radical, conserved site SMA_RS10120 550ac4d4e86fad22f6b049e8b763414b 738 TIGRFAM TIGR02487 NrdD: anaerobic ribonucleoside-triphosphate reductase 131 721 2.3E-179 T 25-04-2016 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.17.4.2|KEGG: 00240+1.17.4.2|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 SMA_RS02965 1960c9136c03a07a2cae126f1b00208a 69 SUPERFAMILY SSF158379 1 62 2.35E-25 T 25-04-2016 IPR023164 YqgQ-like domain SMA_RS02965 1960c9136c03a07a2cae126f1b00208a 69 Pfam PF06014 Bacterial protein of unknown function (DUF910) 1 60 3.0E-31 T 25-04-2016 IPR009256 Protein of unknown function DUF910 SMA_RS02965 1960c9136c03a07a2cae126f1b00208a 69 PANTHER PTHR41311 1 69 1.3E-19 T 25-04-2016 SMA_RS02965 1960c9136c03a07a2cae126f1b00208a 69 Gene3D G3DSA:1.10.287.760 1 68 3.1E-35 T 25-04-2016 IPR023164 YqgQ-like domain SMA_RS09990 1dc95fbadc5f293e744669a51799c8c7 314 PANTHER PTHR36838:SF1 3 314 3.2E-43 T 25-04-2016 SMA_RS09990 1dc95fbadc5f293e744669a51799c8c7 314 Pfam PF03547 Membrane transport protein 165 307 2.1E-19 T 25-04-2016 IPR004776 Auxin efflux carrier GO:0016021|GO:0055085 SMA_RS09990 1dc95fbadc5f293e744669a51799c8c7 314 Pfam PF03547 Membrane transport protein 11 154 2.6E-19 T 25-04-2016 IPR004776 Auxin efflux carrier GO:0016021|GO:0055085 SMA_RS09990 1dc95fbadc5f293e744669a51799c8c7 314 PANTHER PTHR36838 3 314 3.2E-43 T 25-04-2016 SMA_RS07840 1e9971f76be8397bb07beef6e4adfb84 389 PANTHER PTHR23530 2 383 1.8E-32 T 25-04-2016 SMA_RS07840 1e9971f76be8397bb07beef6e4adfb84 389 PANTHER PTHR23530:SF1 2 383 1.8E-32 T 25-04-2016 SMA_RS07840 1e9971f76be8397bb07beef6e4adfb84 389 Gene3D G3DSA:1.20.1250.20 10 194 2.0E-18 T 25-04-2016 SMA_RS07840 1e9971f76be8397bb07beef6e4adfb84 389 SUPERFAMILY SSF103473 10 385 1.96E-33 T 25-04-2016 IPR020846 Major facilitator superfamily domain SMA_RS07840 1e9971f76be8397bb07beef6e4adfb84 389 Gene3D G3DSA:1.20.1250.20 206 385 7.2E-10 T 25-04-2016 SMA_RS07840 1e9971f76be8397bb07beef6e4adfb84 389 Pfam PF07690 Major Facilitator Superfamily 11 349 6.6E-20 T 25-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SMA_RS06655 49370a9b07a46dabf4dd9fdae43e0575 296 TIGRFAM TIGR00147 TIGR00147: lipid kinase, YegS/Rv2252/BmrU family 1 296 9.3E-39 T 25-04-2016 IPR005218 Diacylglycerol/lipid kinase SMA_RS06655 49370a9b07a46dabf4dd9fdae43e0575 296 SUPERFAMILY SSF111331 1 296 6.93E-60 T 25-04-2016 IPR016064 NAD kinase/diacylglycerol kinase-like domain SMA_RS06655 49370a9b07a46dabf4dd9fdae43e0575 296 Pfam PF00781 Diacylglycerol kinase catalytic domain 3 124 7.8E-26 T 25-04-2016 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 SMA_RS06655 49370a9b07a46dabf4dd9fdae43e0575 296 SMART SM00046 3 130 8.9E-5 T 25-04-2016 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 SMA_RS06655 49370a9b07a46dabf4dd9fdae43e0575 296 Gene3D G3DSA:3.40.50.10330 15 80 2.2E-4 T 25-04-2016 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 GO:0003951|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 SMA_RS06655 49370a9b07a46dabf4dd9fdae43e0575 296 PANTHER PTHR12358 2 295 6.5E-33 T 25-04-2016 SMA_RS00245 d9148ecb5a6ce8fe00f67660ee6f1cc2 1241 Gene3D G3DSA:3.30.1330.10 647 806 2.1E-24 T 25-04-2016 IPR016188 PurM-like, N-terminal domain SMA_RS00245 d9148ecb5a6ce8fe00f67660ee6f1cc2 1241 PANTHER PTHR10099 2 235 1.5E-269 T 25-04-2016 SMA_RS00245 d9148ecb5a6ce8fe00f67660ee6f1cc2 1241 PANTHER PTHR10099 262 1241 1.5E-269 T 25-04-2016 SMA_RS00245 d9148ecb5a6ce8fe00f67660ee6f1cc2 1241 Gene3D G3DSA:3.40.50.880 979 1217 8.2E-15 T 25-04-2016 IPR029062 Class I glutamine amidotransferase-like SMA_RS00245 d9148ecb5a6ce8fe00f67660ee6f1cc2 1241 SMART SM01211 976 1238 5.2E-108 T 25-04-2016 SMA_RS00245 d9148ecb5a6ce8fe00f67660ee6f1cc2 1241 SUPERFAMILY SSF52317 974 1238 4.03E-67 T 25-04-2016 IPR029062 Class I glutamine amidotransferase-like SMA_RS00245 d9148ecb5a6ce8fe00f67660ee6f1cc2 1241 SUPERFAMILY SSF56042 813 968 9.16E-12 T 25-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain SMA_RS00245 d9148ecb5a6ce8fe00f67660ee6f1cc2 1241 SUPERFAMILY SSF55326 195 231 2.3E-32 T 25-04-2016 SMA_RS00245 d9148ecb5a6ce8fe00f67660ee6f1cc2 1241 SUPERFAMILY SSF55326 289 429 2.3E-32 T 25-04-2016 SMA_RS00245 d9148ecb5a6ce8fe00f67660ee6f1cc2 1241 PANTHER PTHR10099:SF1 2 235 1.5E-269 T 25-04-2016 SMA_RS00245 d9148ecb5a6ce8fe00f67660ee6f1cc2 1241 PANTHER PTHR10099:SF1 262 1241 1.5E-269 T 25-04-2016 SMA_RS00245 d9148ecb5a6ce8fe00f67660ee6f1cc2 1241 Pfam PF02769 AIR synthase related protein, C-terminal domain 439 590 1.3E-23 T 25-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain SMA_RS00245 d9148ecb5a6ce8fe00f67660ee6f1cc2 1241 SUPERFAMILY SSF56042 440 605 1.92E-37 T 25-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain SMA_RS00245 d9148ecb5a6ce8fe00f67660ee6f1cc2 1241 SUPERFAMILY SSF55326 632 811 7.59E-35 T 25-04-2016 SMA_RS00245 d9148ecb5a6ce8fe00f67660ee6f1cc2 1241 TIGRFAM TIGR01857 FGAM-synthase: phosphoribosylformylglycinamidine synthase 3 1238 0.0 T 25-04-2016 IPR010141 Phosphoribosylformylglycinamidine synthase, FGAM SMA_RS00245 d9148ecb5a6ce8fe00f67660ee6f1cc2 1241 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 977 1238 1.0E-81 T 25-04-2016 SMA_RS00245 d9148ecb5a6ce8fe00f67660ee6f1cc2 1241 Gene3D G3DSA:3.30.1330.10 220 235 1.4E-54 T 25-04-2016 IPR016188 PurM-like, N-terminal domain SMA_RS00245 d9148ecb5a6ce8fe00f67660ee6f1cc2 1241 Gene3D G3DSA:3.30.1330.10 286 430 1.4E-54 T 25-04-2016 IPR016188 PurM-like, N-terminal domain SMA_RS08430 b54259a337aefbcc1fb149d774cadef5 443 Gene3D G3DSA:3.40.50.720 3 89 1.8E-24 T 25-04-2016 IPR016040 NAD(P)-binding domain SMA_RS08430 b54259a337aefbcc1fb149d774cadef5 443 Pfam PF08245 Mur ligase middle domain 108 275 1.4E-20 T 25-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SMA_RS08430 b54259a337aefbcc1fb149d774cadef5 443 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 5 429 4.2E-120 T 25-04-2016 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SMA_RS08430 b54259a337aefbcc1fb149d774cadef5 443 SUPERFAMILY SSF53244 296 433 1.19E-36 T 25-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SMA_RS08430 b54259a337aefbcc1fb149d774cadef5 443 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 2 437 34.334 T 25-04-2016 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SMA_RS08430 b54259a337aefbcc1fb149d774cadef5 443 PANTHER PTHR23135 1 426 2.5E-147 T 25-04-2016 SMA_RS08430 b54259a337aefbcc1fb149d774cadef5 443 Pfam PF02875 Mur ligase family, glutamate ligase domain 297 378 3.2E-16 T 25-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SMA_RS08430 b54259a337aefbcc1fb149d774cadef5 443 SUPERFAMILY SSF51984 3 88 4.12E-18 T 25-04-2016 SMA_RS08430 b54259a337aefbcc1fb149d774cadef5 443 Gene3D G3DSA:3.90.190.20 299 435 1.3E-42 T 25-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SMA_RS08430 b54259a337aefbcc1fb149d774cadef5 443 PANTHER PTHR23135:SF5 1 426 2.5E-147 T 25-04-2016 SMA_RS08430 b54259a337aefbcc1fb149d774cadef5 443 Gene3D G3DSA:3.40.1190.10 92 298 1.0E-57 T 25-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SMA_RS08430 b54259a337aefbcc1fb149d774cadef5 443 SUPERFAMILY SSF53623 90 294 4.58E-56 T 25-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SMA_RS08430 b54259a337aefbcc1fb149d774cadef5 443 Pfam PF01225 Mur ligase family, catalytic domain 4 103 3.5E-25 T 25-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 SMA_RS07790 613f5fafeac773b00aeb56e0d865e27a 78 PRINTS PR01651 Protein-export SecG membrane protein signature 3 23 7.7E-5 T 25-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 SMA_RS07790 613f5fafeac773b00aeb56e0d865e27a 78 PRINTS PR01651 Protein-export SecG membrane protein signature 56 78 7.7E-5 T 25-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 SMA_RS07790 613f5fafeac773b00aeb56e0d865e27a 78 Pfam PF03840 Preprotein translocase SecG subunit 5 75 9.0E-14 T 25-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 SMA_RS07790 613f5fafeac773b00aeb56e0d865e27a 78 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 2 76 7.1E-17 T 25-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 SMA_RS07550 372b16ae0d0697ea3a0d75cb8df60b81 260 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 1 253 17.913 T 25-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 SMA_RS07550 372b16ae0d0697ea3a0d75cb8df60b81 260 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 4 248 1.9E-78 T 25-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 SMA_RS07550 372b16ae0d0697ea3a0d75cb8df60b81 260 PANTHER PTHR30589:SF0 2 260 8.7E-103 T 25-04-2016 SMA_RS07550 372b16ae0d0697ea3a0d75cb8df60b81 260 PANTHER PTHR30589 2 260 8.7E-103 T 25-04-2016 SMA_RS07550 372b16ae0d0697ea3a0d75cb8df60b81 260 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 131 143 - T 25-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 SMA_RS07550 372b16ae0d0697ea3a0d75cb8df60b81 260 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 3 249 1.3E-67 T 25-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 SMA_RS06170 91b187f9fbed64d9eface833f7349bf1 90 Gene3D G3DSA:3.30.1320.10 2 84 4.4E-35 T 25-04-2016 IPR023803 Ribosomal protein S16 domain SMA_RS06170 91b187f9fbed64d9eface833f7349bf1 90 Pfam PF00886 Ribosomal protein S16 9 67 2.5E-25 T 25-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS06170 91b187f9fbed64d9eface833f7349bf1 90 SUPERFAMILY SSF54565 2 86 8.63E-34 T 25-04-2016 IPR023803 Ribosomal protein S16 domain SMA_RS06170 91b187f9fbed64d9eface833f7349bf1 90 TIGRFAM TIGR00002 S16: ribosomal protein bS16 3 80 1.6E-34 T 25-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS06170 91b187f9fbed64d9eface833f7349bf1 90 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 2 77 25.237 T 25-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS06170 91b187f9fbed64d9eface833f7349bf1 90 PANTHER PTHR12919 2 83 4.1E-43 T 25-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS08575 b8840f5dda4f67e802cd9808c8c0208c 265 Gene3D G3DSA:3.40.190.10 24 104 4.9E-27 T 25-04-2016 SMA_RS08575 b8840f5dda4f67e802cd9808c8c0208c 265 Gene3D G3DSA:3.40.190.10 212 253 4.9E-27 T 25-04-2016 SMA_RS08575 b8840f5dda4f67e802cd9808c8c0208c 265 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 28 251 1.2E-40 T 25-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SMA_RS08575 b8840f5dda4f67e802cd9808c8c0208c 265 PANTHER PTHR18966:SF208 25 251 1.8E-19 T 25-04-2016 SMA_RS08575 b8840f5dda4f67e802cd9808c8c0208c 265 PANTHER PTHR18966 25 251 1.8E-19 T 25-04-2016 SMA_RS08575 b8840f5dda4f67e802cd9808c8c0208c 265 Gene3D G3DSA:3.40.190.10 105 205 1.0E-18 T 25-04-2016 SMA_RS08575 b8840f5dda4f67e802cd9808c8c0208c 265 SUPERFAMILY SSF53850 28 256 2.78E-44 T 25-04-2016 SMA_RS08575 b8840f5dda4f67e802cd9808c8c0208c 265 SMART SM00062 26 253 1.3E-37 T 25-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SMA_RS00970 351f6f0c10d2a00c8469f0bcb7de2c95 833 Pfam PF08264 Anticodon-binding domain of tRNA 684 794 1.1E-17 T 25-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 SMA_RS00970 351f6f0c10d2a00c8469f0bcb7de2c95 833 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 3 832 22.597 T 25-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 SMA_RS00970 351f6f0c10d2a00c8469f0bcb7de2c95 833 PANTHER PTHR11946:SF7 609 832 0.0 T 25-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 SMA_RS00970 351f6f0c10d2a00c8469f0bcb7de2c95 833 PANTHER PTHR11946:SF7 240 265 0.0 T 25-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 SMA_RS00970 351f6f0c10d2a00c8469f0bcb7de2c95 833 PANTHER PTHR11946:SF7 4 207 0.0 T 25-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 SMA_RS00970 351f6f0c10d2a00c8469f0bcb7de2c95 833 PANTHER PTHR11946:SF7 471 575 0.0 T 25-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 SMA_RS00970 351f6f0c10d2a00c8469f0bcb7de2c95 833 PANTHER PTHR11946:SF7 288 453 0.0 T 25-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 SMA_RS00970 351f6f0c10d2a00c8469f0bcb7de2c95 833 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 43 53 - T 25-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SMA_RS00970 351f6f0c10d2a00c8469f0bcb7de2c95 833 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 609 636 2.9E-6 T 25-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SMA_RS00970 351f6f0c10d2a00c8469f0bcb7de2c95 833 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 414 571 3.7E-5 T 25-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SMA_RS00970 351f6f0c10d2a00c8469f0bcb7de2c95 833 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 221 401 1.5E-67 T 25-04-2016 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 SMA_RS00970 351f6f0c10d2a00c8469f0bcb7de2c95 833 SUPERFAMILY SSF52374 413 658 4.98E-136 T 25-04-2016 SMA_RS00970 351f6f0c10d2a00c8469f0bcb7de2c95 833 SUPERFAMILY SSF52374 4 226 4.98E-136 T 25-04-2016 SMA_RS00970 351f6f0c10d2a00c8469f0bcb7de2c95 833 Gene3D G3DSA:3.90.740.10 223 421 5.6E-61 T 25-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 SMA_RS00970 351f6f0c10d2a00c8469f0bcb7de2c95 833 SUPERFAMILY SSF50677 226 412 4.4E-55 T 25-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 SMA_RS00970 351f6f0c10d2a00c8469f0bcb7de2c95 833 Pfam PF09334 tRNA synthetases class I (M) 40 162 1.8E-16 T 25-04-2016 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SMA_RS00970 351f6f0c10d2a00c8469f0bcb7de2c95 833 Gene3D G3DSA:3.40.50.620 609 638 2.7E-158 T 25-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SMA_RS00970 351f6f0c10d2a00c8469f0bcb7de2c95 833 Gene3D G3DSA:3.40.50.620 3 222 2.7E-158 T 25-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SMA_RS00970 351f6f0c10d2a00c8469f0bcb7de2c95 833 Gene3D G3DSA:3.40.50.620 422 574 2.7E-158 T 25-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SMA_RS00970 351f6f0c10d2a00c8469f0bcb7de2c95 833 SUPERFAMILY SSF47323 653 833 8.22E-31 T 25-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SMA_RS00970 351f6f0c10d2a00c8469f0bcb7de2c95 833 PANTHER PTHR11946 609 832 0.0 T 25-04-2016 SMA_RS00970 351f6f0c10d2a00c8469f0bcb7de2c95 833 PANTHER PTHR11946 240 265 0.0 T 25-04-2016 SMA_RS00970 351f6f0c10d2a00c8469f0bcb7de2c95 833 PANTHER PTHR11946 4 207 0.0 T 25-04-2016 SMA_RS00970 351f6f0c10d2a00c8469f0bcb7de2c95 833 PANTHER PTHR11946 471 575 0.0 T 25-04-2016 SMA_RS00970 351f6f0c10d2a00c8469f0bcb7de2c95 833 PANTHER PTHR11946 288 453 0.0 T 25-04-2016 SMA_RS00970 351f6f0c10d2a00c8469f0bcb7de2c95 833 PRINTS PR00985 Leucyl-tRNA synthetase signature 186 199 1.7E-54 T 25-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 SMA_RS00970 351f6f0c10d2a00c8469f0bcb7de2c95 833 PRINTS PR00985 Leucyl-tRNA synthetase signature 153 169 1.7E-54 T 25-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 SMA_RS00970 351f6f0c10d2a00c8469f0bcb7de2c95 833 PRINTS PR00985 Leucyl-tRNA synthetase signature 486 504 1.7E-54 T 25-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 SMA_RS00970 351f6f0c10d2a00c8469f0bcb7de2c95 833 PRINTS PR00985 Leucyl-tRNA synthetase signature 558 568 1.7E-54 T 25-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 SMA_RS00970 351f6f0c10d2a00c8469f0bcb7de2c95 833 PRINTS PR00985 Leucyl-tRNA synthetase signature 525 547 1.7E-54 T 25-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 SMA_RS00970 351f6f0c10d2a00c8469f0bcb7de2c95 833 PRINTS PR00985 Leucyl-tRNA synthetase signature 127 144 1.7E-54 T 25-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 SMA_RS00970 351f6f0c10d2a00c8469f0bcb7de2c95 833 PRINTS PR00985 Leucyl-tRNA synthetase signature 215 234 1.7E-54 T 25-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 SMA_RS00970 351f6f0c10d2a00c8469f0bcb7de2c95 833 Gene3D G3DSA:1.10.730.10 639 768 1.2E-37 T 25-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SMA_RS00970 351f6f0c10d2a00c8469f0bcb7de2c95 833 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 4 833 0.0 T 25-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 SMA_RS08885 902c75285b303e8c850ed7fe4a721a11 226 Gene3D G3DSA:3.30.420.10 68 143 3.6E-7 T 25-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMA_RS08885 902c75285b303e8c850ed7fe4a721a11 226 PANTHER PTHR35528 1 176 3.7E-41 T 25-04-2016 SMA_RS08885 902c75285b303e8c850ed7fe4a721a11 226 PANTHER PTHR35528:SF1 1 176 3.7E-41 T 25-04-2016 SMA_RS08885 902c75285b303e8c850ed7fe4a721a11 226 SUPERFAMILY SSF53098 69 184 1.27E-9 T 25-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMA_RS08885 902c75285b303e8c850ed7fe4a721a11 226 Pfam PF13610 DDE domain 72 203 1.7E-42 T 25-04-2016 IPR032874 DDE domain SMA_RS03020 2dd914d59e1c5707f60859dcc5a1572a 358 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 5 144 5.6E-40 T 25-04-2016 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 SMA_RS03020 2dd914d59e1c5707f60859dcc5a1572a 358 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 5 351 23.26 T 25-04-2016 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 SMA_RS03020 2dd914d59e1c5707f60859dcc5a1572a 358 SUPERFAMILY SSF53756 3 334 1.08E-76 T 25-04-2016 SMA_RS03020 2dd914d59e1c5707f60859dcc5a1572a 358 PANTHER PTHR21015:SF27 1 352 1.5E-157 T 25-04-2016 SMA_RS03020 2dd914d59e1c5707f60859dcc5a1572a 358 PANTHER PTHR21015 1 352 1.5E-157 T 25-04-2016 SMA_RS03020 2dd914d59e1c5707f60859dcc5a1572a 358 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 189 339 5.1E-24 T 25-04-2016 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 SMA_RS03020 2dd914d59e1c5707f60859dcc5a1572a 358 Gene3D G3DSA:3.40.50.2000 192 333 2.7E-28 T 25-04-2016 SMA_RS03020 2dd914d59e1c5707f60859dcc5a1572a 358 Gene3D G3DSA:3.40.50.2000 2 191 4.6E-55 T 25-04-2016 SMA_RS08500 c18e487cbbb019cba5df06aa65bd266f 223 SUPERFAMILY SSF116726 132 216 1.02E-10 T 25-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SMA_RS08500 c18e487cbbb019cba5df06aa65bd266f 223 Pfam PF02080 TrkA-C domain 151 216 1.7E-6 T 25-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SMA_RS08500 c18e487cbbb019cba5df06aa65bd266f 223 SUPERFAMILY SSF51735 6 135 4.51E-30 T 25-04-2016 IPR016040 NAD(P)-binding domain SMA_RS08500 c18e487cbbb019cba5df06aa65bd266f 223 Gene3D G3DSA:3.30.70.1450 148 219 6.9E-9 T 25-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SMA_RS08500 c18e487cbbb019cba5df06aa65bd266f 223 PANTHER PTHR16254 8 160 7.9E-38 T 25-04-2016 SMA_RS08500 c18e487cbbb019cba5df06aa65bd266f 223 Gene3D G3DSA:3.40.50.720 4 138 1.6E-32 T 25-04-2016 IPR016040 NAD(P)-binding domain SMA_RS08500 c18e487cbbb019cba5df06aa65bd266f 223 Pfam PF02254 TrkA-N domain 8 121 1.5E-24 T 25-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 SMA_RS02820 791f147952d12315e8d7716985b9a164 165 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 5 158 8.2E-56 T 25-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 SMA_RS02820 791f147952d12315e8d7716985b9a164 165 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 4 63 1.3E-17 T 25-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 SMA_RS02820 791f147952d12315e8d7716985b9a164 165 Pfam PF01467 Cytidylyltransferase-like 6 135 7.1E-19 T 25-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 SMA_RS02820 791f147952d12315e8d7716985b9a164 165 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 3 160 32.145 T 25-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 SMA_RS02820 791f147952d12315e8d7716985b9a164 165 ProDom PD016147 LIGASE LYASE CITRATE PRO-3S-LYASE SYNTHETASE TRANSFERASE CYTIDYLTRANSFERASE-RELATED:CITRATE ACETATE:SH-CITRATE CITC PLASMID 3 75 0.003 T 25-04-2016 SMA_RS02820 791f147952d12315e8d7716985b9a164 165 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 21 42 3.8E-34 T 25-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 SMA_RS02820 791f147952d12315e8d7716985b9a164 165 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 50 74 3.8E-34 T 25-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 SMA_RS02820 791f147952d12315e8d7716985b9a164 165 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 3 21 3.8E-34 T 25-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 SMA_RS02820 791f147952d12315e8d7716985b9a164 165 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 87 103 3.8E-34 T 25-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 SMA_RS02820 791f147952d12315e8d7716985b9a164 165 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 114 136 3.8E-34 T 25-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 SMA_RS02820 791f147952d12315e8d7716985b9a164 165 PANTHER PTHR21342 1 158 8.4E-55 T 25-04-2016 SMA_RS02820 791f147952d12315e8d7716985b9a164 165 Gene3D G3DSA:3.40.50.620 1 159 5.5E-50 T 25-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SMA_RS02820 791f147952d12315e8d7716985b9a164 165 PANTHER PTHR21342:SF1 1 158 8.4E-55 T 25-04-2016 SMA_RS02820 791f147952d12315e8d7716985b9a164 165 SUPERFAMILY SSF52374 3 159 1.31E-41 T 25-04-2016 SMA_RS00070 bc7aad7ee3c4145421fd559af0502669 660 ProSitePatterns PS00674 AAA-protein family signature. 326 344 - T 25-04-2016 IPR003960 ATPase, AAA-type, conserved site GO:0005524 SMA_RS00070 bc7aad7ee3c4145421fd559af0502669 660 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 223 355 3.1E-44 T 25-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 SMA_RS00070 bc7aad7ee3c4145421fd559af0502669 660 SMART SM00382 219 358 5.7E-23 T 25-04-2016 IPR003593 AAA+ ATPase domain SMA_RS00070 bc7aad7ee3c4145421fd559af0502669 660 Gene3D G3DSA:3.40.50.300 183 365 2.8E-61 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS00070 bc7aad7ee3c4145421fd559af0502669 660 SUPERFAMILY SSF52540 182 426 1.26E-70 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS00070 bc7aad7ee3c4145421fd559af0502669 660 Gene3D G3DSA:1.10.8.60 366 430 3.0E-27 T 25-04-2016 SMA_RS00070 bc7aad7ee3c4145421fd559af0502669 660 PANTHER PTHR23076 1 660 2.0E-300 T 25-04-2016 SMA_RS00070 bc7aad7ee3c4145421fd559af0502669 660 PANTHER PTHR23076:SF10 1 660 2.0E-300 T 25-04-2016 SMA_RS00070 bc7aad7ee3c4145421fd559af0502669 660 Pfam PF06480 FtsH Extracellular 14 128 8.8E-10 T 25-04-2016 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 SMA_RS00070 bc7aad7ee3c4145421fd559af0502669 660 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 12 640 36.671 T 25-04-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 SMA_RS00070 bc7aad7ee3c4145421fd559af0502669 660 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 135 624 8.6E-225 T 25-04-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 SMA_RS00070 bc7aad7ee3c4145421fd559af0502669 660 Pfam PF01434 Peptidase family M41 418 623 2.2E-79 T 25-04-2016 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 SMA_RS00070 bc7aad7ee3c4145421fd559af0502669 660 SUPERFAMILY SSF140990 438 630 1.22E-69 T 25-04-2016 SMA_RS10075 c24caf6e12ffb8f53dc5ab6c38ec4df7 317 PANTHER PTHR30237:SF5 1 317 4.5E-98 T 25-04-2016 SMA_RS10075 c24caf6e12ffb8f53dc5ab6c38ec4df7 317 SUPERFAMILY SSF52317 2 165 5.04E-41 T 25-04-2016 IPR029062 Class I glutamine amidotransferase-like SMA_RS10075 c24caf6e12ffb8f53dc5ab6c38ec4df7 317 PANTHER PTHR30237 1 317 4.5E-98 T 25-04-2016 SMA_RS10075 c24caf6e12ffb8f53dc5ab6c38ec4df7 317 SUPERFAMILY SSF141986 163 310 1.01E-33 T 25-04-2016 IPR027461 LD-carboxypeptidase A, C-terminal domain SMA_RS10075 c24caf6e12ffb8f53dc5ab6c38ec4df7 317 Gene3D G3DSA:3.40.50.10740 2 166 6.4E-42 T 25-04-2016 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal domain SMA_RS10075 c24caf6e12ffb8f53dc5ab6c38ec4df7 317 Pfam PF02016 LD-carboxypeptidase 10 306 7.9E-65 T 25-04-2016 IPR003507 Peptidase family S66 SMA_RS10075 c24caf6e12ffb8f53dc5ab6c38ec4df7 317 Gene3D G3DSA:3.50.30.60 182 313 1.6E-31 T 25-04-2016 IPR027461 LD-carboxypeptidase A, C-terminal domain SMA_RS10075 c24caf6e12ffb8f53dc5ab6c38ec4df7 317 PIRSF PIRSF028757 1 317 7.1E-66 T 25-04-2016 IPR003507 Peptidase family S66 SMA_RS08935 649765a819cef3a1f7070c38870d3d34 104 PIRSF PIRSF000077 1 104 1.1E-38 T 25-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 SMA_RS08935 649765a819cef3a1f7070c38870d3d34 104 TIGRFAM TIGR01068 thioredoxin: thioredoxin 7 102 9.7E-35 T 25-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 SMA_RS08935 649765a819cef3a1f7070c38870d3d34 104 Pfam PF00085 Thioredoxin 2 101 5.8E-29 T 25-04-2016 IPR013766 Thioredoxin domain GO:0045454 SMA_RS08935 649765a819cef3a1f7070c38870d3d34 104 PANTHER PTHR10438 1 103 2.4E-36 T 25-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 SMA_RS08935 649765a819cef3a1f7070c38870d3d34 104 SUPERFAMILY SSF52833 2 102 2.1E-36 T 25-04-2016 IPR012336 Thioredoxin-like fold SMA_RS08935 649765a819cef3a1f7070c38870d3d34 104 PRINTS PR00421 Thioredoxin family signature 19 27 8.4E-7 T 25-04-2016 SMA_RS08935 649765a819cef3a1f7070c38870d3d34 104 PRINTS PR00421 Thioredoxin family signature 68 79 8.4E-7 T 25-04-2016 SMA_RS08935 649765a819cef3a1f7070c38870d3d34 104 PRINTS PR00421 Thioredoxin family signature 27 36 8.4E-7 T 25-04-2016 SMA_RS08935 649765a819cef3a1f7070c38870d3d34 104 Gene3D G3DSA:3.40.30.10 2 103 6.6E-36 T 25-04-2016 IPR012336 Thioredoxin-like fold SMA_RS08935 649765a819cef3a1f7070c38870d3d34 104 ProSitePatterns PS00194 Thioredoxin family active site. 20 38 - T 25-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 SMA_RS06880 85afe9e813c43e1e8985c7a7abd5588f 302 PANTHER PTHR24220:SF523 4 235 3.9E-86 T 25-04-2016 SMA_RS06880 85afe9e813c43e1e8985c7a7abd5588f 302 PANTHER PTHR24220:SF523 260 295 3.9E-86 T 25-04-2016 SMA_RS06880 85afe9e813c43e1e8985c7a7abd5588f 302 SMART SM00382 27 206 9.3E-13 T 25-04-2016 IPR003593 AAA+ ATPase domain SMA_RS06880 85afe9e813c43e1e8985c7a7abd5588f 302 PANTHER PTHR24220 4 235 3.9E-86 T 25-04-2016 SMA_RS06880 85afe9e813c43e1e8985c7a7abd5588f 302 PANTHER PTHR24220 260 295 3.9E-86 T 25-04-2016 SMA_RS06880 85afe9e813c43e1e8985c7a7abd5588f 302 Gene3D G3DSA:3.40.50.300 2 230 1.7E-63 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS06880 85afe9e813c43e1e8985c7a7abd5588f 302 SUPERFAMILY SSF52540 3 227 4.3E-59 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS06880 85afe9e813c43e1e8985c7a7abd5588f 302 Pfam PF00005 ABC transporter 18 157 1.1E-27 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMA_RS07055 c57e782d649090fe3a4b0fbded7807fe 303 Pfam PF01867 CRISPR associated protein Cas1 8 243 3.3E-31 T 25-04-2016 IPR002729 CRISPR-associated protein Cas1 SMA_RS07055 c57e782d649090fe3a4b0fbded7807fe 303 TIGRFAM TIGR00287 cas1: CRISPR-associated endonuclease Cas1 13 285 6.7E-29 T 25-04-2016 IPR002729 CRISPR-associated protein Cas1 SMA_RS07055 c57e782d649090fe3a4b0fbded7807fe 303 Hamap MF_01470 CRISPR-associated endonuclease Cas1 [cas1]. 4 295 14.53 T 25-04-2016 IPR002729 CRISPR-associated protein Cas1 SMA_RS07055 c57e782d649090fe3a4b0fbded7807fe 303 PANTHER PTHR34353 1 255 7.9E-37 T 25-04-2016 SMA_RS07055 c57e782d649090fe3a4b0fbded7807fe 303 TIGRFAM TIGR03639 cas1_NMENI: CRISPR-associated endonuclease Cas1, subtype II/NMENI 3 280 1.5E-96 T 25-04-2016 IPR019855 CRISPR-associated protein Cas1, NMENI subtype SMA_RS04515 070aa61f87f103aa4d8d754139c83453 340 Pfam PF01063 Amino-transferase class IV 55 293 5.1E-31 T 25-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 SMA_RS04515 070aa61f87f103aa4d8d754139c83453 340 TIGRFAM TIGR01123 ilvE_II: branched-chain amino acid aminotransferase 30 339 2.4E-134 T 25-04-2016 IPR005786 Branched-chain amino acid aminotransferase II GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|Reactome: REACT_13 SMA_RS04515 070aa61f87f103aa4d8d754139c83453 340 Gene3D G3DSA:3.20.10.10 161 325 8.1E-54 T 25-04-2016 SMA_RS04515 070aa61f87f103aa4d8d754139c83453 340 Gene3D G3DSA:3.30.470.10 3 160 9.5E-64 T 25-04-2016 SMA_RS04515 070aa61f87f103aa4d8d754139c83453 340 PANTHER PTHR11825 4 338 3.2E-155 T 25-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 SMA_RS04515 070aa61f87f103aa4d8d754139c83453 340 SUPERFAMILY SSF56752 3 336 2.22E-98 T 25-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 SMA_RS04515 070aa61f87f103aa4d8d754139c83453 340 ProSitePatterns PS00770 Aminotransferases class-IV signature. 220 249 - T 25-04-2016 IPR018300 Aminotransferase, class IV, conserved site GO:0003824|GO:0008152 Reactome: REACT_13 SMA_RS04515 070aa61f87f103aa4d8d754139c83453 340 PIRSF PIRSF006468 2 340 6.5E-117 T 25-04-2016 IPR005786 Branched-chain amino acid aminotransferase II GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|Reactome: REACT_13 SMA_RS04515 070aa61f87f103aa4d8d754139c83453 340 PANTHER PTHR11825:SF2 4 338 3.2E-155 T 25-04-2016 SMA_RS08800 80bfbec1f891c50648adcbb85aebf99f 129 PANTHER PTHR34297:SF1 4 129 2.0E-29 T 25-04-2016 SMA_RS08800 80bfbec1f891c50648adcbb85aebf99f 129 PANTHER PTHR34297 4 129 2.0E-29 T 25-04-2016 SMA_RS08800 80bfbec1f891c50648adcbb85aebf99f 129 Pfam PF03780 Asp23 family, cell envelope-related function 7 108 2.5E-28 T 25-04-2016 IPR005531 Alkaline shock protein Asp23 SMA_RS05235 7b7e96944285eb758a19ce3880bc8926 455 Gene3D G3DSA:3.50.50.60 112 326 1.0E-50 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMA_RS05235 7b7e96944285eb758a19ce3880bc8926 455 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 107 116 1.8E-8 T 25-04-2016 SMA_RS05235 7b7e96944285eb758a19ce3880bc8926 455 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 287 294 1.8E-8 T 25-04-2016 SMA_RS05235 7b7e96944285eb758a19ce3880bc8926 455 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 247 261 1.8E-8 T 25-04-2016 SMA_RS05235 7b7e96944285eb758a19ce3880bc8926 455 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 410 425 1.8E-8 T 25-04-2016 SMA_RS05235 7b7e96944285eb758a19ce3880bc8926 455 PANTHER PTHR22912:SF147 3 453 7.5E-187 T 25-04-2016 SMA_RS05235 7b7e96944285eb758a19ce3880bc8926 455 PANTHER PTHR22912 3 453 7.5E-187 T 25-04-2016 SMA_RS05235 7b7e96944285eb758a19ce3880bc8926 455 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 246 262 1.1E-24 T 25-04-2016 SMA_RS05235 7b7e96944285eb758a19ce3880bc8926 455 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 272 294 1.1E-24 T 25-04-2016 SMA_RS05235 7b7e96944285eb758a19ce3880bc8926 455 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 1.1E-24 T 25-04-2016 SMA_RS05235 7b7e96944285eb758a19ce3880bc8926 455 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 104 122 1.1E-24 T 25-04-2016 SMA_RS05235 7b7e96944285eb758a19ce3880bc8926 455 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 162 180 1.1E-24 T 25-04-2016 SMA_RS05235 7b7e96944285eb758a19ce3880bc8926 455 SUPERFAMILY SSF55424 333 454 1.53E-29 T 25-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 SMA_RS05235 7b7e96944285eb758a19ce3880bc8926 455 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 317 1.4E-66 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMA_RS05235 7b7e96944285eb758a19ce3880bc8926 455 Gene3D G3DSA:3.30.390.30 345 454 4.0E-33 T 25-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 SMA_RS05235 7b7e96944285eb758a19ce3880bc8926 455 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 346 441 7.2E-11 T 25-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 SMA_RS05235 7b7e96944285eb758a19ce3880bc8926 455 SUPERFAMILY SSF51905 2 327 7.99E-40 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMA_RS05235 7b7e96944285eb758a19ce3880bc8926 455 Gene3D G3DSA:3.50.50.60 2 111 5.9E-17 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMA_RS06255 a8b6c990a32cb83665f87c008b63648c 111 Pfam PF04327 Cysteine peptidase C108, N-terminal of ribosomal L27 1 104 5.1E-25 T 25-04-2016 IPR007422 Cysteine peptidase C108, N-terminal of ribosomal L27 SMA_RS06255 a8b6c990a32cb83665f87c008b63648c 111 PANTHER PTHR39178 2 111 2.5E-23 T 25-04-2016 SMA_RS06255 a8b6c990a32cb83665f87c008b63648c 111 Gene3D G3DSA:3.30.70.1490 6 110 3.7E-14 T 25-04-2016 SMA_RS06255 a8b6c990a32cb83665f87c008b63648c 111 SUPERFAMILY SSF118010 1 107 7.19E-32 T 25-04-2016 SMA_RS01345 d8b9c622f7cde09c805fffbdbb0f59e8 420 Gene3D G3DSA:2.30.42.10 166 273 2.1E-16 T 25-04-2016 IPR001478 PDZ domain GO:0005515 SMA_RS01345 d8b9c622f7cde09c805fffbdbb0f59e8 420 PANTHER PTHR22939 144 156 8.1E-55 T 25-04-2016 SMA_RS01345 d8b9c622f7cde09c805fffbdbb0f59e8 420 PANTHER PTHR22939 198 420 8.1E-55 T 25-04-2016 SMA_RS01345 d8b9c622f7cde09c805fffbdbb0f59e8 420 SUPERFAMILY SSF50156 172 270 1.71E-11 T 25-04-2016 IPR001478 PDZ domain GO:0005515 SMA_RS01345 d8b9c622f7cde09c805fffbdbb0f59e8 420 PANTHER PTHR22939:SF78 144 156 8.1E-55 T 25-04-2016 SMA_RS01345 d8b9c622f7cde09c805fffbdbb0f59e8 420 PANTHER PTHR22939:SF78 198 420 8.1E-55 T 25-04-2016 SMA_RS01345 d8b9c622f7cde09c805fffbdbb0f59e8 420 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 4 419 2.3E-77 T 25-04-2016 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 SMA_RS01345 d8b9c622f7cde09c805fffbdbb0f59e8 420 Pfam PF02163 Peptidase family M50 6 406 9.7E-81 T 25-04-2016 IPR008915 Peptidase M50 GO:0004222|GO:0006508 SMA_RS01345 d8b9c622f7cde09c805fffbdbb0f59e8 420 Pfam PF13180 PDZ domain 201 272 8.1E-8 T 25-04-2016 IPR001478 PDZ domain GO:0005515 SMA_RS02375 3365c32ea456e45aa5a90fe06d08908e 447 Gene3D G3DSA:3.40.50.300 2 204 3.5E-68 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS02375 3365c32ea456e45aa5a90fe06d08908e 447 PANTHER PTHR24031 1 440 1.4E-212 T 25-04-2016 SMA_RS02375 3365c32ea456e45aa5a90fe06d08908e 447 PANTHER PTHR24031:SF280 1 440 1.4E-212 T 25-04-2016 SMA_RS02375 3365c32ea456e45aa5a90fe06d08908e 447 SUPERFAMILY SSF52540 68 358 2.07E-64 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS02375 3365c32ea456e45aa5a90fe06d08908e 447 SMART SM00490 256 337 1.4E-26 T 25-04-2016 IPR001650 Helicase, C-terminal SMA_RS02375 3365c32ea456e45aa5a90fe06d08908e 447 Pfam PF00270 DEAD/DEAH box helicase 25 191 1.2E-42 T 25-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 SMA_RS02375 3365c32ea456e45aa5a90fe06d08908e 447 Hamap MF_01494 DEAD-box ATP-dependent RNA helicase CshB [cshB]. 1 435 51.082 T 25-04-2016 IPR030881 DEAD-box ATP-dependent RNA helicase CshB GO:0004386|GO:0009409 SMA_RS02375 3365c32ea456e45aa5a90fe06d08908e 447 SMART SM00487 20 220 1.7E-52 T 25-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain SMA_RS02375 3365c32ea456e45aa5a90fe06d08908e 447 Pfam PF00271 Helicase conserved C-terminal domain 230 337 5.3E-25 T 25-04-2016 IPR001650 Helicase, C-terminal SMA_RS02375 3365c32ea456e45aa5a90fe06d08908e 447 Gene3D G3DSA:3.40.50.300 205 360 5.6E-42 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS01850 0b2e46954a4246aa9930c174f4014ca1 62 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 62 18.216 T 25-04-2016 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS01850 0b2e46954a4246aa9930c174f4014ca1 62 Gene3D G3DSA:4.10.1160.10 19 61 2.8E-21 T 25-04-2016 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS01850 0b2e46954a4246aa9930c174f4014ca1 62 PANTHER PTHR39080 2 62 5.4E-22 T 25-04-2016 SMA_RS01850 0b2e46954a4246aa9930c174f4014ca1 62 SUPERFAMILY SSF143800 1 60 2.16E-24 T 25-04-2016 SMA_RS01850 0b2e46954a4246aa9930c174f4014ca1 62 PANTHER PTHR39080:SF1 2 62 5.4E-22 T 25-04-2016 SMA_RS01850 0b2e46954a4246aa9930c174f4014ca1 62 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 56 2.2E-22 T 25-04-2016 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS01850 0b2e46954a4246aa9930c174f4014ca1 62 Pfam PF00830 Ribosomal L28 family 3 57 9.4E-22 T 25-04-2016 IPR026569 Ribosomal protein L28/L24 GO:0003735 SMA_RS05485 70e244ed2b88b62cbae1488d217c8cf6 442 PANTHER PTHR30330:SF3 1 441 3.3E-217 T 25-04-2016 SMA_RS05485 70e244ed2b88b62cbae1488d217c8cf6 442 PRINTS PR00175 Sodium/alanine symporter signature 303 321 1.3E-55 T 25-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SMA_RS05485 70e244ed2b88b62cbae1488d217c8cf6 442 PRINTS PR00175 Sodium/alanine symporter signature 407 427 1.3E-55 T 25-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SMA_RS05485 70e244ed2b88b62cbae1488d217c8cf6 442 PRINTS PR00175 Sodium/alanine symporter signature 208 227 1.3E-55 T 25-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SMA_RS05485 70e244ed2b88b62cbae1488d217c8cf6 442 PRINTS PR00175 Sodium/alanine symporter signature 348 370 1.3E-55 T 25-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SMA_RS05485 70e244ed2b88b62cbae1488d217c8cf6 442 PRINTS PR00175 Sodium/alanine symporter signature 86 108 1.3E-55 T 25-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SMA_RS05485 70e244ed2b88b62cbae1488d217c8cf6 442 PRINTS PR00175 Sodium/alanine symporter signature 180 198 1.3E-55 T 25-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SMA_RS05485 70e244ed2b88b62cbae1488d217c8cf6 442 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 86 101 - T 25-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SMA_RS05485 70e244ed2b88b62cbae1488d217c8cf6 442 PANTHER PTHR30330 1 441 3.3E-217 T 25-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SMA_RS05485 70e244ed2b88b62cbae1488d217c8cf6 442 TIGRFAM TIGR00835 agcS: amino acid carrier protein 13 438 4.1E-161 T 25-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SMA_RS05485 70e244ed2b88b62cbae1488d217c8cf6 442 Pfam PF01235 Sodium:alanine symporter family 50 441 7.7E-149 T 25-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SMA_RS05270 8b80aaa7e83f927a24f74f58f12da5e2 220 Pfam PF01791 DeoC/LacD family aldolase 7 210 2.5E-17 T 25-04-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 SMA_RS05270 8b80aaa7e83f927a24f74f58f12da5e2 220 PIRSF PIRSF001357 1 219 1.6E-78 T 25-04-2016 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|UniPathway: UPA00002 SMA_RS05270 8b80aaa7e83f927a24f74f58f12da5e2 220 SMART SM01133 2 213 4.7E-105 T 25-04-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 SMA_RS05270 8b80aaa7e83f927a24f74f58f12da5e2 220 Hamap MF_00114 Deoxyribose-phosphate aldolase [deoC]. 1 215 37.806 T 25-04-2016 IPR028581 Deoxyribose-phosphate aldolase type I GO:0004139 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|UniPathway: UPA00002 SMA_RS05270 8b80aaa7e83f927a24f74f58f12da5e2 220 PANTHER PTHR10889 1 213 2.4E-111 T 25-04-2016 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|UniPathway: UPA00002 SMA_RS05270 8b80aaa7e83f927a24f74f58f12da5e2 220 TIGRFAM TIGR00126 deoC: deoxyribose-phosphate aldolase 3 211 4.6E-91 T 25-04-2016 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|UniPathway: UPA00002 SMA_RS05270 8b80aaa7e83f927a24f74f58f12da5e2 220 Gene3D G3DSA:3.20.20.70 2 214 2.5E-93 T 25-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SMA_RS05270 8b80aaa7e83f927a24f74f58f12da5e2 220 SUPERFAMILY SSF51569 2 213 8.16E-84 T 25-04-2016 SMA_RS01240 24950179ca65d50547f610a56c03359e 159 SUPERFAMILY SSF63520 2 48 2.09E-7 T 25-04-2016 IPR011608 PRD domain GO:0006355 SMA_RS01240 24950179ca65d50547f610a56c03359e 159 PANTHER PTHR30185:SF2 1 159 6.2E-38 T 25-04-2016 SMA_RS01240 24950179ca65d50547f610a56c03359e 159 Pfam PF00874 PRD domain 67 157 3.9E-11 T 25-04-2016 IPR011608 PRD domain GO:0006355 SMA_RS01240 24950179ca65d50547f610a56c03359e 159 Pfam PF00874 PRD domain 1 45 1.7E-6 T 25-04-2016 IPR011608 PRD domain GO:0006355 SMA_RS01240 24950179ca65d50547f610a56c03359e 159 Gene3D G3DSA:1.10.1790.10 60 158 9.4E-17 T 25-04-2016 IPR011608 PRD domain GO:0006355 SMA_RS01240 24950179ca65d50547f610a56c03359e 159 SUPERFAMILY SSF63520 63 158 4.05E-12 T 25-04-2016 IPR011608 PRD domain GO:0006355 SMA_RS01240 24950179ca65d50547f610a56c03359e 159 PANTHER PTHR30185 1 159 6.2E-38 T 25-04-2016 SMA_RS01240 24950179ca65d50547f610a56c03359e 159 Gene3D G3DSA:1.10.1790.10 2 47 1.0E-7 T 25-04-2016 IPR011608 PRD domain GO:0006355 SMA_RS04320 640baea6786df28735efd6b8c27cc930 403 SUPERFAMILY SSF143856 108 226 3.27E-47 T 25-04-2016 IPR024052 Phosphopentomutase DeoB cap domain GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180|UniPathway: UPA00087 SMA_RS04320 640baea6786df28735efd6b8c27cc930 403 Hamap MF_00740 Phosphopentomutase [deoB]. 4 399 53.867 T 25-04-2016 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180|UniPathway: UPA00087 SMA_RS04320 640baea6786df28735efd6b8c27cc930 403 Gene3D G3DSA:3.40.720.10 3 107 1.2E-70 T 25-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 SMA_RS04320 640baea6786df28735efd6b8c27cc930 403 Gene3D G3DSA:3.40.720.10 230 402 1.2E-70 T 25-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 SMA_RS04320 640baea6786df28735efd6b8c27cc930 403 PANTHER PTHR21110 5 403 4.3E-145 T 25-04-2016 SMA_RS04320 640baea6786df28735efd6b8c27cc930 403 Pfam PF01676 Metalloenzyme superfamily 6 390 6.3E-41 T 25-04-2016 IPR006124 Metalloenzyme GO:0003824|GO:0046872 SMA_RS04320 640baea6786df28735efd6b8c27cc930 403 Gene3D G3DSA:3.30.70.1250 108 226 6.0E-52 T 25-04-2016 IPR024052 Phosphopentomutase DeoB cap domain GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180|UniPathway: UPA00087 SMA_RS04320 640baea6786df28735efd6b8c27cc930 403 PANTHER PTHR21110:SF0 5 403 4.3E-145 T 25-04-2016 SMA_RS04320 640baea6786df28735efd6b8c27cc930 403 TIGRFAM TIGR01696 deoB: phosphopentomutase 6 396 3.4E-158 T 25-04-2016 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180|UniPathway: UPA00087 SMA_RS04320 640baea6786df28735efd6b8c27cc930 403 PIRSF PIRSF001491 3 403 9.3E-151 T 25-04-2016 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180|UniPathway: UPA00087 SMA_RS04320 640baea6786df28735efd6b8c27cc930 403 SUPERFAMILY SSF53649 3 108 1.74E-80 T 25-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 SMA_RS04320 640baea6786df28735efd6b8c27cc930 403 SUPERFAMILY SSF53649 227 402 1.74E-80 T 25-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 SMA_RS06975 75910771c142735726ec45f3dbe57ce8 606 Gene3D G3DSA:3.40.50.300 362 561 6.4E-60 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS06975 75910771c142735726ec45f3dbe57ce8 606 Gene3D G3DSA:3.40.50.300 89 206 6.4E-60 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS06975 75910771c142735726ec45f3dbe57ce8 606 Pfam PF02534 Type IV secretory system Conjugative DNA transfer 130 555 3.8E-67 T 25-04-2016 IPR003688 Type IV secretion system protein TraG/VirD4 GO:0009291|GO:0016020 SMA_RS06975 75910771c142735726ec45f3dbe57ce8 606 SUPERFAMILY SSF52540 133 563 6.73E-44 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS01785 98f271d4927d47db6a2c14bfb1670257 587 Gene3D G3DSA:3.50.50.60 221 270 3.9E-11 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMA_RS01785 98f271d4927d47db6a2c14bfb1670257 587 Gene3D G3DSA:3.50.50.60 15 90 3.9E-11 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMA_RS01785 98f271d4927d47db6a2c14bfb1670257 587 SUPERFAMILY SSF51905 26 279 1.78E-21 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMA_RS01785 98f271d4927d47db6a2c14bfb1670257 587 Pfam PF06100 MCRA family 22 518 1.7E-205 T 25-04-2016 IPR010354 Oleate hydratase GO:0006631|GO:0050151|GO:0071949 UniPathway: UPA00199 SMA_RS01785 98f271d4927d47db6a2c14bfb1670257 587 PANTHER PTHR37417:SF1 1 584 7.0E-296 T 25-04-2016 SMA_RS01785 98f271d4927d47db6a2c14bfb1670257 587 PANTHER PTHR37417 1 584 7.0E-296 T 25-04-2016 SMA_RS03645 29a2ba0a53518c0ca87e0ebe5fae68a4 462 Gene3D G3DSA:3.40.1060.10 166 281 6.9E-39 T 25-04-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SMA_RS03645 29a2ba0a53518c0ca87e0ebe5fae68a4 462 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 4 457 7.6E-204 T 25-04-2016 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SMA_RS03645 29a2ba0a53518c0ca87e0ebe5fae68a4 462 PANTHER PTHR11670 1 462 8.9E-224 T 25-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SMA_RS03645 29a2ba0a53518c0ca87e0ebe5fae68a4 462 ProSitePatterns PS00450 Aconitase family signature 1. 332 348 - T 25-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SMA_RS03645 29a2ba0a53518c0ca87e0ebe5fae68a4 462 Pfam PF00330 Aconitase family (aconitate hydratase) 8 450 1.1E-145 T 25-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SMA_RS03645 29a2ba0a53518c0ca87e0ebe5fae68a4 462 ProSitePatterns PS01244 Aconitase family signature 2. 392 405 - T 25-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SMA_RS03645 29a2ba0a53518c0ca87e0ebe5fae68a4 462 SUPERFAMILY SSF53732 3 458 1.7E-159 T 25-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SMA_RS03645 29a2ba0a53518c0ca87e0ebe5fae68a4 462 Gene3D G3DSA:3.30.499.10 20 164 1.9E-21 T 25-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SMA_RS03645 29a2ba0a53518c0ca87e0ebe5fae68a4 462 PANTHER PTHR11670:SF12 1 462 8.9E-224 T 25-04-2016 SMA_RS03645 29a2ba0a53518c0ca87e0ebe5fae68a4 462 Gene3D G3DSA:3.30.499.10 320 459 6.6E-59 T 25-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SMA_RS03645 29a2ba0a53518c0ca87e0ebe5fae68a4 462 PRINTS PR00415 Aconitase family signature 108 116 5.7E-44 T 25-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SMA_RS03645 29a2ba0a53518c0ca87e0ebe5fae68a4 462 PRINTS PR00415 Aconitase family signature 133 148 5.7E-44 T 25-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SMA_RS03645 29a2ba0a53518c0ca87e0ebe5fae68a4 462 PRINTS PR00415 Aconitase family signature 392 405 5.7E-44 T 25-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SMA_RS03645 29a2ba0a53518c0ca87e0ebe5fae68a4 462 PRINTS PR00415 Aconitase family signature 119 132 5.7E-44 T 25-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SMA_RS03645 29a2ba0a53518c0ca87e0ebe5fae68a4 462 PRINTS PR00415 Aconitase family signature 286 300 5.7E-44 T 25-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SMA_RS03645 29a2ba0a53518c0ca87e0ebe5fae68a4 462 PRINTS PR00415 Aconitase family signature 195 208 5.7E-44 T 25-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SMA_RS03645 29a2ba0a53518c0ca87e0ebe5fae68a4 462 PRINTS PR00415 Aconitase family signature 336 347 5.7E-44 T 25-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SMA_RS03645 29a2ba0a53518c0ca87e0ebe5fae68a4 462 PRINTS PR00415 Aconitase family signature 209 222 5.7E-44 T 25-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SMA_RS03645 29a2ba0a53518c0ca87e0ebe5fae68a4 462 PRINTS PR00415 Aconitase family signature 82 95 5.7E-44 T 25-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SMA_RS03645 29a2ba0a53518c0ca87e0ebe5fae68a4 462 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 2 459 55.843 T 25-04-2016 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SMA_RS06360 bf33418d94f2937470aa54871cfede7b 66 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 64 17.589 T 25-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 SMA_RS06360 bf33418d94f2937470aa54871cfede7b 66 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 62 1.9E-22 T 25-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 SMA_RS06360 bf33418d94f2937470aa54871cfede7b 66 PANTHER PTHR33343 1 66 4.7E-23 T 25-04-2016 SMA_RS06360 bf33418d94f2937470aa54871cfede7b 66 PRINTS PR00064 Ribosomal protein L35 signature 36 54 6.3E-17 T 25-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 SMA_RS06360 bf33418d94f2937470aa54871cfede7b 66 PRINTS PR00064 Ribosomal protein L35 signature 3 20 6.3E-17 T 25-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 SMA_RS06360 bf33418d94f2937470aa54871cfede7b 66 PRINTS PR00064 Ribosomal protein L35 signature 21 35 6.3E-17 T 25-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 SMA_RS06360 bf33418d94f2937470aa54871cfede7b 66 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 31 - T 25-04-2016 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS06360 bf33418d94f2937470aa54871cfede7b 66 SUPERFAMILY SSF143034 2 62 7.46E-20 T 25-04-2016 SMA_RS06360 bf33418d94f2937470aa54871cfede7b 66 Pfam PF01632 Ribosomal protein L35 2 62 2.3E-21 T 25-04-2016 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS06080 5f84af94d017034e29ace369f64b1680 255 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 121 255 1.1E-31 T 25-04-2016 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 SMA_RS06080 5f84af94d017034e29ace369f64b1680 255 SUPERFAMILY SSF55347 119 227 2.4E-40 T 25-04-2016 SMA_RS06080 5f84af94d017034e29ace369f64b1680 255 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 3 118 4.9E-28 T 25-04-2016 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 SMA_RS06080 5f84af94d017034e29ace369f64b1680 255 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 3 255 28.367 T 25-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 SMA_RS06080 5f84af94d017034e29ace369f64b1680 255 SUPERFAMILY SSF51735 3 145 4.11E-35 T 25-04-2016 IPR016040 NAD(P)-binding domain SMA_RS06080 5f84af94d017034e29ace369f64b1680 255 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 3 255 4.5E-73 T 25-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 SMA_RS06080 5f84af94d017034e29ace369f64b1680 255 PANTHER PTHR20836 1 255 5.8E-85 T 25-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 SMA_RS06080 5f84af94d017034e29ace369f64b1680 255 Gene3D G3DSA:3.30.360.10 129 224 4.0E-37 T 25-04-2016 SMA_RS06080 5f84af94d017034e29ace369f64b1680 255 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 140 157 - T 25-04-2016 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 SMA_RS06080 5f84af94d017034e29ace369f64b1680 255 Gene3D G3DSA:3.40.50.720 3 128 1.5E-13 T 25-04-2016 IPR016040 NAD(P)-binding domain SMA_RS06080 5f84af94d017034e29ace369f64b1680 255 PIRSF PIRSF000161 1 255 1.1E-67 T 25-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 SMA_RS01700 22d1a66a1357922c3495b6a5c76702bc 449 Gene3D G3DSA:1.10.150.130 95 196 2.6E-8 T 25-04-2016 IPR023109 Integrase/recombinase, N-terminal SMA_RS01700 22d1a66a1357922c3495b6a5c76702bc 449 Pfam PF00589 Phage integrase family 218 433 1.1E-23 T 25-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 SMA_RS01700 22d1a66a1357922c3495b6a5c76702bc 449 PANTHER PTHR30349 95 340 1.1E-26 T 25-04-2016 SMA_RS01700 22d1a66a1357922c3495b6a5c76702bc 449 PANTHER PTHR30349 366 449 1.1E-26 T 25-04-2016 SMA_RS01700 22d1a66a1357922c3495b6a5c76702bc 449 SUPERFAMILY SSF56349 95 436 1.15E-46 T 25-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 SMA_RS01700 22d1a66a1357922c3495b6a5c76702bc 449 Gene3D G3DSA:1.10.443.10 218 437 1.2E-34 T 25-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 SMA_RS01700 22d1a66a1357922c3495b6a5c76702bc 449 PANTHER PTHR30349:SF20 95 340 1.1E-26 T 25-04-2016 SMA_RS01700 22d1a66a1357922c3495b6a5c76702bc 449 PANTHER PTHR30349:SF20 366 449 1.1E-26 T 25-04-2016 SMA_RS01190 d40fb060289d1e3b54c5cf065ec5338e 141 PANTHER PTHR30345:SF5 1 141 6.3E-85 T 25-04-2016 SMA_RS01190 d40fb060289d1e3b54c5cf065ec5338e 141 Pfam PF02502 Ribose/Galactose Isomerase 3 137 1.2E-38 T 25-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 SMA_RS01190 d40fb060289d1e3b54c5cf065ec5338e 141 PIRSF PIRSF005384 1 141 9.6E-40 T 25-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 SMA_RS01190 d40fb060289d1e3b54c5cf065ec5338e 141 TIGRFAM TIGR00689 rpiB_lacA_lacB: sugar-phosphate isomerase, RpiB/LacA/LacB family 3 139 1.3E-33 T 25-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 SMA_RS01190 d40fb060289d1e3b54c5cf065ec5338e 141 Gene3D G3DSA:3.40.1400.10 1 140 4.1E-41 T 25-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 SMA_RS01190 d40fb060289d1e3b54c5cf065ec5338e 141 PANTHER PTHR30345 1 141 6.3E-85 T 25-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 SMA_RS01190 d40fb060289d1e3b54c5cf065ec5338e 141 TIGRFAM TIGR01118 lacA: galactose-6-phosphate isomerase, LacA subunit 1 140 2.1E-72 T 25-04-2016 IPR004783 Galactose-6-phosphate isomerase subunit LacA GO:0005990|GO:0050044 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 SMA_RS01190 d40fb060289d1e3b54c5cf065ec5338e 141 Hamap MF_01555 Galactose-6-phosphate isomerase subunit LacA [lacA]. 1 141 39.826 T 25-04-2016 IPR004783 Galactose-6-phosphate isomerase subunit LacA GO:0005990|GO:0050044 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 SMA_RS01190 d40fb060289d1e3b54c5cf065ec5338e 141 SUPERFAMILY SSF89623 1 140 8.37E-44 T 25-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 SMA_RS04535 3b672f8fec8d19af92f31c2917b10ebe 398 PANTHER PTHR10724:SF6 1 354 1.3E-88 T 25-04-2016 SMA_RS04535 3b672f8fec8d19af92f31c2917b10ebe 398 SMART SM00316 277 348 1.6E-26 T 25-04-2016 IPR022967 RNA-binding domain, S1 SMA_RS04535 3b672f8fec8d19af92f31c2917b10ebe 398 SMART SM00316 15 91 1.7E-6 T 25-04-2016 IPR022967 RNA-binding domain, S1 SMA_RS04535 3b672f8fec8d19af92f31c2917b10ebe 398 SMART SM00316 105 173 1.2E-6 T 25-04-2016 IPR022967 RNA-binding domain, S1 SMA_RS04535 3b672f8fec8d19af92f31c2917b10ebe 398 SMART SM00316 192 262 2.2E-25 T 25-04-2016 IPR022967 RNA-binding domain, S1 SMA_RS04535 3b672f8fec8d19af92f31c2917b10ebe 398 Pfam PF00575 S1 RNA binding domain 14 74 9.1E-8 T 25-04-2016 IPR003029 S1 domain GO:0003676 SMA_RS04535 3b672f8fec8d19af92f31c2917b10ebe 398 Pfam PF00575 S1 RNA binding domain 190 262 3.8E-22 T 25-04-2016 IPR003029 S1 domain GO:0003676 SMA_RS04535 3b672f8fec8d19af92f31c2917b10ebe 398 Pfam PF00575 S1 RNA binding domain 106 173 1.4E-9 T 25-04-2016 IPR003029 S1 domain GO:0003676 SMA_RS04535 3b672f8fec8d19af92f31c2917b10ebe 398 Pfam PF00575 S1 RNA binding domain 275 348 3.6E-25 T 25-04-2016 IPR003029 S1 domain GO:0003676 SMA_RS04535 3b672f8fec8d19af92f31c2917b10ebe 398 SUPERFAMILY SSF50249 4 114 4.25E-13 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMA_RS04535 3b672f8fec8d19af92f31c2917b10ebe 398 SUPERFAMILY SSF50249 106 186 9.36E-13 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMA_RS04535 3b672f8fec8d19af92f31c2917b10ebe 398 PANTHER PTHR10724 1 354 1.3E-88 T 25-04-2016 SMA_RS04535 3b672f8fec8d19af92f31c2917b10ebe 398 SUPERFAMILY SSF50249 191 279 1.79E-24 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMA_RS04535 3b672f8fec8d19af92f31c2917b10ebe 398 SUPERFAMILY SSF50249 278 361 2.61E-26 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMA_RS04535 3b672f8fec8d19af92f31c2917b10ebe 398 PRINTS PR00681 Ribosomal protein S1 signature 110 126 1.0E-36 T 25-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 SMA_RS04535 3b672f8fec8d19af92f31c2917b10ebe 398 PRINTS PR00681 Ribosomal protein S1 signature 157 177 1.0E-36 T 25-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 SMA_RS04535 3b672f8fec8d19af92f31c2917b10ebe 398 PRINTS PR00681 Ribosomal protein S1 signature 17 35 1.0E-36 T 25-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 SMA_RS04535 3b672f8fec8d19af92f31c2917b10ebe 398 PRINTS PR00681 Ribosomal protein S1 signature 214 235 1.0E-36 T 25-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 SMA_RS04535 3b672f8fec8d19af92f31c2917b10ebe 398 PRINTS PR00681 Ribosomal protein S1 signature 128 145 1.0E-36 T 25-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 SMA_RS04535 3b672f8fec8d19af92f31c2917b10ebe 398 PRINTS PR00681 Ribosomal protein S1 signature 292 311 1.0E-36 T 25-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 SMA_RS04535 3b672f8fec8d19af92f31c2917b10ebe 398 PRINTS PR00681 Ribosomal protein S1 signature 331 349 1.0E-36 T 25-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 SMA_RS04535 3b672f8fec8d19af92f31c2917b10ebe 398 Gene3D G3DSA:2.40.50.140 275 349 4.0E-31 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMA_RS04535 3b672f8fec8d19af92f31c2917b10ebe 398 Gene3D G3DSA:2.40.50.140 106 174 8.6E-13 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMA_RS04535 3b672f8fec8d19af92f31c2917b10ebe 398 Gene3D G3DSA:2.40.50.140 9 91 4.0E-12 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMA_RS04535 3b672f8fec8d19af92f31c2917b10ebe 398 Gene3D G3DSA:2.40.50.140 194 274 1.2E-27 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMA_RS10540 07d3e4db4aa7a118ca7f935e7fdad31f 426 Gene3D G3DSA:2.40.10.10 75 195 1.6E-27 T 25-04-2016 SMA_RS10540 07d3e4db4aa7a118ca7f935e7fdad31f 426 PRINTS PR00834 HtrA/DegQ protease family signature 206 230 1.6E-35 T 25-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 SMA_RS10540 07d3e4db4aa7a118ca7f935e7fdad31f 426 PRINTS PR00834 HtrA/DegQ protease family signature 248 265 1.6E-35 T 25-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 SMA_RS10540 07d3e4db4aa7a118ca7f935e7fdad31f 426 PRINTS PR00834 HtrA/DegQ protease family signature 270 287 1.6E-35 T 25-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 SMA_RS10540 07d3e4db4aa7a118ca7f935e7fdad31f 426 PRINTS PR00834 HtrA/DegQ protease family signature 165 185 1.6E-35 T 25-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 SMA_RS10540 07d3e4db4aa7a118ca7f935e7fdad31f 426 PRINTS PR00834 HtrA/DegQ protease family signature 364 376 1.6E-35 T 25-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 SMA_RS10540 07d3e4db4aa7a118ca7f935e7fdad31f 426 PRINTS PR00834 HtrA/DegQ protease family signature 144 156 1.6E-35 T 25-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 SMA_RS10540 07d3e4db4aa7a118ca7f935e7fdad31f 426 Pfam PF13365 Trypsin-like peptidase domain 132 277 7.6E-30 T 25-04-2016 SMA_RS10540 07d3e4db4aa7a118ca7f935e7fdad31f 426 Pfam PF13180 PDZ domain 320 415 8.5E-22 T 25-04-2016 IPR001478 PDZ domain GO:0005515 SMA_RS10540 07d3e4db4aa7a118ca7f935e7fdad31f 426 SUPERFAMILY SSF50156 348 418 1.46E-16 T 25-04-2016 IPR001478 PDZ domain GO:0005515 SMA_RS10540 07d3e4db4aa7a118ca7f935e7fdad31f 426 Gene3D G3DSA:2.30.42.10 323 419 4.0E-20 T 25-04-2016 IPR001478 PDZ domain GO:0005515 SMA_RS10540 07d3e4db4aa7a118ca7f935e7fdad31f 426 PANTHER PTHR22939 29 97 8.4E-101 T 25-04-2016 SMA_RS10540 07d3e4db4aa7a118ca7f935e7fdad31f 426 PANTHER PTHR22939 114 415 8.4E-101 T 25-04-2016 SMA_RS10540 07d3e4db4aa7a118ca7f935e7fdad31f 426 Gene3D G3DSA:2.40.10.10 198 322 6.5E-42 T 25-04-2016 SMA_RS10540 07d3e4db4aa7a118ca7f935e7fdad31f 426 SUPERFAMILY SSF50494 76 312 1.89E-55 T 25-04-2016 IPR009003 Peptidase S1, PA clan SMA_RS10540 07d3e4db4aa7a118ca7f935e7fdad31f 426 PANTHER PTHR22939:SF79 29 97 8.4E-101 T 25-04-2016 SMA_RS10540 07d3e4db4aa7a118ca7f935e7fdad31f 426 PANTHER PTHR22939:SF79 114 415 8.4E-101 T 25-04-2016 SMA_RS10540 07d3e4db4aa7a118ca7f935e7fdad31f 426 SMART SM00228 320 406 2.5E-8 T 25-04-2016 IPR001478 PDZ domain GO:0005515 SMA_RS05075 fcfa39e8c935cf00848f48ee2e052c58 250 PANTHER PTHR24220:SF494 4 243 1.3E-106 T 25-04-2016 SMA_RS05075 fcfa39e8c935cf00848f48ee2e052c58 250 Gene3D G3DSA:3.40.50.300 2 224 5.1E-69 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS05075 fcfa39e8c935cf00848f48ee2e052c58 250 SMART SM00382 33 220 6.8E-17 T 25-04-2016 IPR003593 AAA+ ATPase domain SMA_RS05075 fcfa39e8c935cf00848f48ee2e052c58 250 PANTHER PTHR24220 4 243 1.3E-106 T 25-04-2016 SMA_RS05075 fcfa39e8c935cf00848f48ee2e052c58 250 SUPERFAMILY SSF52540 2 225 1.19E-67 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS05075 fcfa39e8c935cf00848f48ee2e052c58 250 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SMA_RS05075 fcfa39e8c935cf00848f48ee2e052c58 250 Pfam PF00005 ABC transporter 24 173 4.0E-36 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMA_RS02410 69fb29919f829bd2589206500627661f 274 PANTHER PTHR23090:SF7 1 274 1.5E-159 T 25-04-2016 SMA_RS02410 69fb29919f829bd2589206500627661f 274 PANTHER PTHR23090 1 274 1.5E-159 T 25-04-2016 SMA_RS02410 69fb29919f829bd2589206500627661f 274 Gene3D G3DSA:3.40.50.620 4 269 2.5E-66 T 25-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SMA_RS02410 69fb29919f829bd2589206500627661f 274 TIGRFAM TIGR00552 nadE: NAD+ synthetase 18 274 3.3E-72 T 25-04-2016 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|UniPathway: UPA00253 SMA_RS02410 69fb29919f829bd2589206500627661f 274 Hamap MF_00193 NH(3)-dependent NAD(+) synthetase [nadE]. 17 268 30.171 T 25-04-2016 IPR022926 NH(3)-dependent NAD(+) synthetase GO:0008795|GO:0009435 KEGG: 00760+6.3.1.5|UniPathway: UPA00253 SMA_RS02410 69fb29919f829bd2589206500627661f 274 SUPERFAMILY SSF52402 3 273 2.99E-83 T 25-04-2016 SMA_RS02410 69fb29919f829bd2589206500627661f 274 Pfam PF02540 NAD synthase 23 265 7.4E-67 T 25-04-2016 IPR022310 NAD/GMP synthase SMA_RS06875 398ae3c56d1b81a5c5d26c2922ed59ff 240 Pfam PF12730 ABC-2 family transporter protein 4 182 3.4E-8 T 25-04-2016 IPR032688 ABC-2 family transporter protein GO:0006810 SMA_RS08790 c2ea32b2ab075f4a32ff7d3cc1bf780f 320 ProSitePatterns PS00356 LacI-type HTH domain signature. 5 23 - T 25-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SMA_RS08790 c2ea32b2ab075f4a32ff7d3cc1bf780f 320 PANTHER PTHR30146 2 309 1.4E-92 T 25-04-2016 SMA_RS08790 c2ea32b2ab075f4a32ff7d3cc1bf780f 320 Gene3D G3DSA:1.10.260.40 4 54 1.4E-25 T 25-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SMA_RS08790 c2ea32b2ab075f4a32ff7d3cc1bf780f 320 Pfam PF13377 Periplasmic binding protein-like domain 166 319 3.5E-21 T 25-04-2016 SMA_RS08790 c2ea32b2ab075f4a32ff7d3cc1bf780f 320 PANTHER PTHR30146:SF31 2 309 1.4E-92 T 25-04-2016 SMA_RS08790 c2ea32b2ab075f4a32ff7d3cc1bf780f 320 SMART SM00354 2 72 1.7E-37 T 25-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SMA_RS08790 c2ea32b2ab075f4a32ff7d3cc1bf780f 320 SUPERFAMILY SSF53822 62 314 5.89E-61 T 25-04-2016 IPR028082 Periplasmic binding protein-like I SMA_RS08790 c2ea32b2ab075f4a32ff7d3cc1bf780f 320 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 4 14 5.6E-5 T 25-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SMA_RS08790 c2ea32b2ab075f4a32ff7d3cc1bf780f 320 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 14 24 5.6E-5 T 25-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SMA_RS08790 c2ea32b2ab075f4a32ff7d3cc1bf780f 320 Gene3D G3DSA:3.40.50.2300 55 169 4.7E-40 T 25-04-2016 SMA_RS08790 c2ea32b2ab075f4a32ff7d3cc1bf780f 320 Pfam PF00356 Bacterial regulatory proteins, lacI family 5 49 5.1E-21 T 25-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SMA_RS08790 c2ea32b2ab075f4a32ff7d3cc1bf780f 320 SUPERFAMILY SSF47413 3 57 9.38E-18 T 25-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SMA_RS08790 c2ea32b2ab075f4a32ff7d3cc1bf780f 320 Gene3D G3DSA:3.40.50.2300 170 302 8.7E-27 T 25-04-2016 SMA_RS02510 b2e057e00fbcb2ff5a6f047109f3c23b 231 Pfam PF09922 Cell wall-active antibiotics response 4TMS YvqF 115 228 3.8E-35 T 25-04-2016 IPR024425 Cell wall-active antibiotics response 4TMS YvqF SMA_RS02510 b2e057e00fbcb2ff5a6f047109f3c23b 231 PIRSF PIRSF031509 1 231 1.7E-79 T 25-04-2016 IPR016975 Cell wall-active antibiotic response protein GO:0016021 SMA_RS02910 6d72d92d909a4180b8e670589a960689 97 SUPERFAMILY SSF48600 1 90 3.82E-16 T 25-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 SMA_RS02910 6d72d92d909a4180b8e670589a960689 97 Pfam PF01817 Chorismate mutase type II 8 88 5.1E-13 T 25-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 SMA_RS02910 6d72d92d909a4180b8e670589a960689 97 SMART SM00830 8 91 1.8E-11 T 25-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 SMA_RS02910 6d72d92d909a4180b8e670589a960689 97 Gene3D G3DSA:1.20.59.10 2 89 6.6E-14 T 25-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 SMA_RS06095 9c9dfa8381945624677de95981b9ca23 219 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 79 212 2.4E-20 T 25-04-2016 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 SMA_RS06095 9c9dfa8381945624677de95981b9ca23 219 PANTHER PTHR33308 44 218 5.4E-22 T 25-04-2016 SMA_RS06095 9c9dfa8381945624677de95981b9ca23 219 PANTHER PTHR33308:SF3 44 218 5.4E-22 T 25-04-2016 SMA_RS06095 9c9dfa8381945624677de95981b9ca23 219 SMART SM00047 63 217 2.9E-44 T 25-04-2016 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 SMA_RS06095 9c9dfa8381945624677de95981b9ca23 219 PRINTS PR01002 Flagellar protein FlgJ signature 194 212 1.1E-5 T 25-04-2016 SMA_RS06095 9c9dfa8381945624677de95981b9ca23 219 PRINTS PR01002 Flagellar protein FlgJ signature 152 173 1.1E-5 T 25-04-2016 SMA_RS06095 9c9dfa8381945624677de95981b9ca23 219 PRINTS PR01002 Flagellar protein FlgJ signature 92 110 1.1E-5 T 25-04-2016 SMA_RS05385 d5cf5a4657db5f72501c56f1773701c6 134 Pfam PF03960 ArsC family 18 113 8.1E-24 T 25-04-2016 IPR006660 Arsenate reductase-like SMA_RS05385 d5cf5a4657db5f72501c56f1773701c6 134 Gene3D G3DSA:3.40.30.10 1 125 3.5E-37 T 25-04-2016 IPR012336 Thioredoxin-like fold SMA_RS05385 d5cf5a4657db5f72501c56f1773701c6 134 PANTHER PTHR30041:SF5 1 134 4.1E-69 T 25-04-2016 SMA_RS05385 d5cf5a4657db5f72501c56f1773701c6 134 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 2 114 2.9E-36 T 25-04-2016 IPR006504 Transcriptional regulator Spx/MgsR SMA_RS05385 d5cf5a4657db5f72501c56f1773701c6 134 Hamap MF_01132 Regulatory protein Spx [spxA]. 1 131 36.341 T 25-04-2016 IPR023731 Regulatory protein Spx GO:0045892 SMA_RS05385 d5cf5a4657db5f72501c56f1773701c6 134 SUPERFAMILY SSF52833 1 125 9.56E-40 T 25-04-2016 IPR012336 Thioredoxin-like fold SMA_RS05385 d5cf5a4657db5f72501c56f1773701c6 134 PANTHER PTHR30041 1 134 4.1E-69 T 25-04-2016 SMA_RS08205 0e9d23e1f6a599a56fcd7c029486c164 262 Gene3D G3DSA:3.80.30.20 29 91 5.5E-5 T 25-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe SMA_RS08205 0e9d23e1f6a599a56fcd7c029486c164 262 ProSitePatterns PS01087 Radical activating enzymes signature. 24 45 - T 25-04-2016 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 SMA_RS08205 0e9d23e1f6a599a56fcd7c029486c164 262 PANTHER PTHR30352 9 248 2.0E-121 T 25-04-2016 SMA_RS08205 0e9d23e1f6a599a56fcd7c029486c164 262 TIGRFAM TIGR02493 PFLA: pyruvate formate-lyase 1-activating enzyme 13 249 2.9E-95 T 25-04-2016 IPR012838 Pyruvate formate-lyase activating enzyme GO:0043365|GO:0055114 SMA_RS08205 0e9d23e1f6a599a56fcd7c029486c164 262 Pfam PF13353 4Fe-4S single cluster domain 22 149 3.0E-17 T 25-04-2016 SMA_RS08205 0e9d23e1f6a599a56fcd7c029486c164 262 PANTHER PTHR30352:SF9 9 248 2.0E-121 T 25-04-2016 SMA_RS08205 0e9d23e1f6a599a56fcd7c029486c164 262 Pfam PF04055 Radical SAM superfamily 30 194 7.5E-28 T 25-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 SMA_RS08205 0e9d23e1f6a599a56fcd7c029486c164 262 Gene3D G3DSA:3.80.30.10 92 254 5.0E-65 T 25-04-2016 SMA_RS08205 0e9d23e1f6a599a56fcd7c029486c164 262 SUPERFAMILY SSF102114 29 231 1.7E-22 T 25-04-2016 SMA_RS09510 cc83e73cc025db3bc00fd88235ce07a2 521 Pfam PF00702 haloacid dehalogenase-like hydrolase 224 440 2.4E-47 T 25-04-2016 SMA_RS09510 cc83e73cc025db3bc00fd88235ce07a2 521 SUPERFAMILY SSF81665 128 221 1.96E-10 T 25-04-2016 SMA_RS09510 cc83e73cc025db3bc00fd88235ce07a2 521 SUPERFAMILY SSF81665 475 514 1.96E-10 T 25-04-2016 SMA_RS09510 cc83e73cc025db3bc00fd88235ce07a2 521 SUPERFAMILY SSF81665 21 31 1.96E-10 T 25-04-2016 SMA_RS09510 cc83e73cc025db3bc00fd88235ce07a2 521 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 9 506 3.1E-97 T 25-04-2016 IPR001757 P-type ATPase GO:0016021 SMA_RS09510 cc83e73cc025db3bc00fd88235ce07a2 521 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 3 518 8.5E-168 T 25-04-2016 SMA_RS09510 cc83e73cc025db3bc00fd88235ce07a2 521 Gene3D G3DSA:3.40.1110.10 242 353 3.3E-24 T 25-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 SMA_RS09510 cc83e73cc025db3bc00fd88235ce07a2 521 Gene3D G3DSA:2.70.150.10 14 128 3.1E-34 T 25-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 SMA_RS09510 cc83e73cc025db3bc00fd88235ce07a2 521 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 229 235 - T 25-04-2016 IPR018303 P-type ATPase, phosphorylation site SMA_RS09510 cc83e73cc025db3bc00fd88235ce07a2 521 SUPERFAMILY SSF81653 30 127 1.57E-30 T 25-04-2016 SMA_RS09510 cc83e73cc025db3bc00fd88235ce07a2 521 PRINTS PR00943 Copper-transporting ATPase signature 150 164 7.8E-11 T 25-04-2016 SMA_RS09510 cc83e73cc025db3bc00fd88235ce07a2 521 PRINTS PR00943 Copper-transporting ATPase signature 210 225 7.8E-11 T 25-04-2016 SMA_RS09510 cc83e73cc025db3bc00fd88235ce07a2 521 PRINTS PR00943 Copper-transporting ATPase signature 17 35 7.8E-11 T 25-04-2016 SMA_RS09510 cc83e73cc025db3bc00fd88235ce07a2 521 PRINTS PR00943 Copper-transporting ATPase signature 403 420 7.8E-11 T 25-04-2016 SMA_RS09510 cc83e73cc025db3bc00fd88235ce07a2 521 PRINTS PR00943 Copper-transporting ATPase signature 460 474 7.8E-11 T 25-04-2016 SMA_RS09510 cc83e73cc025db3bc00fd88235ce07a2 521 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 227 241 1.3E-31 T 25-04-2016 SMA_RS09510 cc83e73cc025db3bc00fd88235ce07a2 521 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 351 362 1.3E-31 T 25-04-2016 SMA_RS09510 cc83e73cc025db3bc00fd88235ce07a2 521 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 373 383 1.3E-31 T 25-04-2016 SMA_RS09510 cc83e73cc025db3bc00fd88235ce07a2 521 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 426 445 1.3E-31 T 25-04-2016 SMA_RS09510 cc83e73cc025db3bc00fd88235ce07a2 521 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 77 91 1.3E-31 T 25-04-2016 SMA_RS09510 cc83e73cc025db3bc00fd88235ce07a2 521 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 449 461 1.3E-31 T 25-04-2016 SMA_RS09510 cc83e73cc025db3bc00fd88235ce07a2 521 Pfam PF00122 E1-E2 ATPase 2 218 4.4E-69 T 25-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 SMA_RS09510 cc83e73cc025db3bc00fd88235ce07a2 521 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 2 508 1.1E-186 T 25-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 SMA_RS09510 cc83e73cc025db3bc00fd88235ce07a2 521 Gene3D G3DSA:3.40.50.1000 354 494 3.2E-67 T 25-04-2016 IPR023214 HAD-like domain SMA_RS09510 cc83e73cc025db3bc00fd88235ce07a2 521 Gene3D G3DSA:3.40.50.1000 198 241 3.2E-67 T 25-04-2016 IPR023214 HAD-like domain SMA_RS09510 cc83e73cc025db3bc00fd88235ce07a2 521 SUPERFAMILY SSF56784 225 245 1.36E-66 T 25-04-2016 IPR023214 HAD-like domain SMA_RS09510 cc83e73cc025db3bc00fd88235ce07a2 521 SUPERFAMILY SSF56784 284 506 1.36E-66 T 25-04-2016 IPR023214 HAD-like domain SMA_RS09510 cc83e73cc025db3bc00fd88235ce07a2 521 PANTHER PTHR24093 10 506 7.7E-215 T 25-04-2016 SMA_RS01955 9001bb9d84c5d1b3f22b3066183c9f08 412 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 22 271 2.5E-84 T 25-04-2016 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 SMA_RS01955 9001bb9d84c5d1b3f22b3066183c9f08 412 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 295 392 5.4E-13 T 25-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 SMA_RS01955 9001bb9d84c5d1b3f22b3066183c9f08 412 SUPERFAMILY SSF56601 2 295 6.06E-73 T 25-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SMA_RS01955 9001bb9d84c5d1b3f22b3066183c9f08 412 Gene3D G3DSA:2.60.410.10 296 392 1.4E-23 T 25-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 SMA_RS01955 9001bb9d84c5d1b3f22b3066183c9f08 412 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 140 153 7.8E-14 T 25-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 SMA_RS01955 9001bb9d84c5d1b3f22b3066183c9f08 412 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 113 130 7.8E-14 T 25-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 SMA_RS01955 9001bb9d84c5d1b3f22b3066183c9f08 412 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 57 68 7.8E-14 T 25-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 SMA_RS01955 9001bb9d84c5d1b3f22b3066183c9f08 412 Gene3D G3DSA:3.40.710.10 10 292 9.0E-90 T 25-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SMA_RS01955 9001bb9d84c5d1b3f22b3066183c9f08 412 PANTHER PTHR21581 10 408 1.7E-106 T 25-04-2016 SMA_RS01955 9001bb9d84c5d1b3f22b3066183c9f08 412 PANTHER PTHR21581:SF11 10 408 1.7E-106 T 25-04-2016 SMA_RS01955 9001bb9d84c5d1b3f22b3066183c9f08 412 SUPERFAMILY SSF69189 287 404 7.46E-15 T 25-04-2016 IPR015956 Penicillin-binding protein-associated GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 SMA_RS01955 9001bb9d84c5d1b3f22b3066183c9f08 412 SMART SM00936 295 393 8.4E-17 T 25-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 SMA_RS08490 33d79f3b9a8f51666bbdfaabf880c7df 237 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 14 215 27.828 T 25-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 SMA_RS08490 33d79f3b9a8f51666bbdfaabf880c7df 237 Gene3D G3DSA:3.40.50.150 3 237 1.8E-76 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMA_RS08490 33d79f3b9a8f51666bbdfaabf880c7df 237 Pfam PF02527 rRNA small subunit methyltransferase G 21 192 1.2E-49 T 25-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 SMA_RS08490 33d79f3b9a8f51666bbdfaabf880c7df 237 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 25 216 1.6E-49 T 25-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 SMA_RS08490 33d79f3b9a8f51666bbdfaabf880c7df 237 PANTHER PTHR31760 10 237 1.7E-85 T 25-04-2016 SMA_RS08490 33d79f3b9a8f51666bbdfaabf880c7df 237 PANTHER PTHR31760:SF0 10 237 1.7E-85 T 25-04-2016 SMA_RS08490 33d79f3b9a8f51666bbdfaabf880c7df 237 SUPERFAMILY SSF53335 1 237 7.97E-46 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMA_RS00235 43304709602fa172fdabafb7f1094ca8 80 Hamap MF_01217 Acyl carrier protein [acpP]. 5 79 15.503 T 25-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 SMA_RS00235 43304709602fa172fdabafb7f1094ca8 80 Gene3D G3DSA:1.10.1200.10 1 79 1.3E-22 T 25-04-2016 IPR009081 Phosphopantetheine binding ACP domain SMA_RS00235 43304709602fa172fdabafb7f1094ca8 80 SUPERFAMILY SSF47336 1 79 7.2E-17 T 25-04-2016 IPR009081 Phosphopantetheine binding ACP domain SMA_RS00235 43304709602fa172fdabafb7f1094ca8 80 Pfam PF00550 Phosphopantetheine attachment site 9 75 1.4E-13 T 25-04-2016 IPR009081 Phosphopantetheine binding ACP domain SMA_RS00235 43304709602fa172fdabafb7f1094ca8 80 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 36 74 4.0E-10 T 25-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 SMA_RS09220 f53d84ddaf4d8d76a0cc4b913f18ad6c 219 Pfam PF00834 Ribulose-phosphate 3 epimerase family 5 202 8.4E-78 T 25-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 SMA_RS09220 f53d84ddaf4d8d76a0cc4b913f18ad6c 219 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 135 157 - T 25-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 SMA_RS09220 f53d84ddaf4d8d76a0cc4b913f18ad6c 219 Gene3D G3DSA:3.20.20.70 2 218 1.1E-94 T 25-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SMA_RS09220 f53d84ddaf4d8d76a0cc4b913f18ad6c 219 PIRSF PIRSF001461 1 219 7.2E-88 T 25-04-2016 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 SMA_RS09220 f53d84ddaf4d8d76a0cc4b913f18ad6c 219 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 33 47 - T 25-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 SMA_RS09220 f53d84ddaf4d8d76a0cc4b913f18ad6c 219 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 5 215 2.1E-83 T 25-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 SMA_RS09220 f53d84ddaf4d8d76a0cc4b913f18ad6c 219 SUPERFAMILY SSF51366 4 215 2.56E-71 T 25-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 SMA_RS09220 f53d84ddaf4d8d76a0cc4b913f18ad6c 219 PANTHER PTHR11749 2 219 1.1E-117 T 25-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 SMA_RS04400 ad68e9e2a7bfcf8dda92c9816b3c2b29 381 Pfam PF00534 Glycosyl transferases group 1 191 360 1.8E-30 T 25-04-2016 IPR001296 Glycosyl transferase, family 1 SMA_RS04400 ad68e9e2a7bfcf8dda92c9816b3c2b29 381 Gene3D G3DSA:3.40.50.2000 167 359 6.6E-28 T 25-04-2016 SMA_RS04400 ad68e9e2a7bfcf8dda92c9816b3c2b29 381 Pfam PF13439 Glycosyltransferase Family 4 15 180 2.1E-19 T 25-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain SMA_RS04400 ad68e9e2a7bfcf8dda92c9816b3c2b29 381 SUPERFAMILY SSF53756 11 381 2.3E-71 T 25-04-2016 SMA_RS04400 ad68e9e2a7bfcf8dda92c9816b3c2b29 381 PANTHER PTHR12526 61 381 1.8E-52 T 25-04-2016 SMA_RS04400 ad68e9e2a7bfcf8dda92c9816b3c2b29 381 PANTHER PTHR12526 3 41 1.8E-52 T 25-04-2016 SMA_RS08720 d980279255646fcda400a1fa8c54dec7 320 PANTHER PTHR11707 4 319 1.9E-54 T 25-04-2016 SMA_RS08720 d980279255646fcda400a1fa8c54dec7 320 PIRSF PIRSF001220 1 319 5.3E-95 T 25-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 SMA_RS08720 d980279255646fcda400a1fa8c54dec7 320 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 6 14 - T 25-04-2016 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 SMA_RS08720 d980279255646fcda400a1fa8c54dec7 320 SMART SM00870 3 315 1.6E-136 T 25-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 SMA_RS08720 d980279255646fcda400a1fa8c54dec7 320 Gene3D G3DSA:3.40.50.1170 1 200 1.9E-62 T 25-04-2016 IPR027474 L-asparaginase, N-terminal SMA_RS08720 d980279255646fcda400a1fa8c54dec7 320 Gene3D G3DSA:3.40.50.40 203 319 2.2E-30 T 25-04-2016 IPR027473 L-asparaginase, C-terminal domain SMA_RS08720 d980279255646fcda400a1fa8c54dec7 320 PRINTS PR00139 Asparaginase/glutaminase family signature 250 268 8.3E-18 T 25-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 SMA_RS08720 d980279255646fcda400a1fa8c54dec7 320 PRINTS PR00139 Asparaginase/glutaminase family signature 4 15 8.3E-18 T 25-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 SMA_RS08720 d980279255646fcda400a1fa8c54dec7 320 PRINTS PR00139 Asparaginase/glutaminase family signature 76 94 8.3E-18 T 25-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 SMA_RS08720 d980279255646fcda400a1fa8c54dec7 320 SUPERFAMILY SSF53774 1 319 4.97E-97 T 25-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 SMA_RS08720 d980279255646fcda400a1fa8c54dec7 320 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 77 87 - T 25-04-2016 IPR027475 Asparaginase/glutaminase, active site 2 SMA_RS08720 d980279255646fcda400a1fa8c54dec7 320 Pfam PF00710 Asparaginase, N-terminal 3 187 1.5E-58 T 25-04-2016 IPR027474 L-asparaginase, N-terminal SMA_RS08720 d980279255646fcda400a1fa8c54dec7 320 PIRSF PIRSF500176 1 320 2.2E-98 T 25-04-2016 SMA_RS10415 d93c146496f13be9310e71e605feb29f 429 SUPERFAMILY SSF63411 16 221 2.7E-38 T 25-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 SMA_RS10415 d93c146496f13be9310e71e605feb29f 429 Pfam PF00675 Insulinase (Peptidase family M16) 60 177 1.5E-18 T 25-04-2016 IPR011765 Peptidase M16, N-terminal SMA_RS10415 d93c146496f13be9310e71e605feb29f 429 Pfam PF05193 Peptidase M16 inactive domain 183 363 4.0E-16 T 25-04-2016 IPR007863 Peptidase M16, C-terminal SMA_RS10415 d93c146496f13be9310e71e605feb29f 429 PANTHER PTHR11851:SF134 1 390 9.4E-75 T 25-04-2016 SMA_RS10415 d93c146496f13be9310e71e605feb29f 429 PANTHER PTHR11851 1 390 9.4E-75 T 25-04-2016 SMA_RS10415 d93c146496f13be9310e71e605feb29f 429 Gene3D G3DSA:3.30.830.10 281 418 8.2E-4 T 25-04-2016 IPR011237 Peptidase M16 domain GO:0046872 SMA_RS10415 d93c146496f13be9310e71e605feb29f 429 SUPERFAMILY SSF63411 255 421 2.02E-11 T 25-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 SMA_RS10415 d93c146496f13be9310e71e605feb29f 429 Gene3D G3DSA:3.30.830.10 14 224 1.4E-42 T 25-04-2016 IPR011237 Peptidase M16 domain GO:0046872 SMA_RS05570 b9a404c700fe450d22243f6378ae8ccc 357 PANTHER PTHR30222 11 356 1.9E-111 T 25-04-2016 SMA_RS05570 b9a404c700fe450d22243f6378ae8ccc 357 Pfam PF13416 Bacterial extracellular solute-binding protein 51 321 1.4E-36 T 25-04-2016 SMA_RS05570 b9a404c700fe450d22243f6378ae8ccc 357 Gene3D G3DSA:3.40.190.10 142 277 6.0E-18 T 25-04-2016 SMA_RS05570 b9a404c700fe450d22243f6378ae8ccc 357 Gene3D G3DSA:3.40.190.10 34 140 2.2E-66 T 25-04-2016 SMA_RS05570 b9a404c700fe450d22243f6378ae8ccc 357 Gene3D G3DSA:3.40.190.10 278 321 2.2E-66 T 25-04-2016 SMA_RS05570 b9a404c700fe450d22243f6378ae8ccc 357 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 156 170 5.2E-60 T 25-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 SMA_RS05570 b9a404c700fe450d22243f6378ae8ccc 357 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 255 274 5.2E-60 T 25-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 SMA_RS05570 b9a404c700fe450d22243f6378ae8ccc 357 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 41 57 5.2E-60 T 25-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 SMA_RS05570 b9a404c700fe450d22243f6378ae8ccc 357 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 57 78 5.2E-60 T 25-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 SMA_RS05570 b9a404c700fe450d22243f6378ae8ccc 357 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 100 113 5.2E-60 T 25-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 SMA_RS05570 b9a404c700fe450d22243f6378ae8ccc 357 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 211 230 5.2E-60 T 25-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 SMA_RS05570 b9a404c700fe450d22243f6378ae8ccc 357 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 131 147 5.2E-60 T 25-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 SMA_RS05570 b9a404c700fe450d22243f6378ae8ccc 357 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 84 98 5.2E-60 T 25-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 SMA_RS05570 b9a404c700fe450d22243f6378ae8ccc 357 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 174 193 5.2E-60 T 25-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 SMA_RS05570 b9a404c700fe450d22243f6378ae8ccc 357 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 300 326 5.2E-60 T 25-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 SMA_RS05570 b9a404c700fe450d22243f6378ae8ccc 357 PANTHER PTHR30222:SF5 11 356 1.9E-111 T 25-04-2016 SMA_RS05570 b9a404c700fe450d22243f6378ae8ccc 357 SUPERFAMILY SSF53850 36 353 3.26E-92 T 25-04-2016 SMA_RS05570 b9a404c700fe450d22243f6378ae8ccc 357 PIRSF PIRSF019574 1 356 7.8E-130 T 25-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 SMA_RS03920 12f4e2e911a4268dce487566f24e76e4 228 PANTHER PTHR38451 1 227 1.4E-71 T 25-04-2016 SMA_RS03920 12f4e2e911a4268dce487566f24e76e4 228 PIRSF PIRSF018637 3 227 1.6E-68 T 25-04-2016 IPR006901 tRNA methyltransferase TrmK GO:0016429 SMA_RS03920 12f4e2e911a4268dce487566f24e76e4 228 Pfam PF04816 tRNA (adenine(22)-N(1))-methyltransferase 22 222 2.9E-73 T 25-04-2016 IPR006901 tRNA methyltransferase TrmK GO:0016429 SMA_RS03920 12f4e2e911a4268dce487566f24e76e4 228 Gene3D G3DSA:3.40.50.150 7 154 2.7E-8 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMA_RS03920 12f4e2e911a4268dce487566f24e76e4 228 SUPERFAMILY SSF53335 7 140 6.25E-8 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMA_RS07125 fec046153d4d37f9a6b38318b323d1ea 447 Gene3D G3DSA:3.40.1190.10 38 189 2.1E-41 T 25-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SMA_RS07125 fec046153d4d37f9a6b38318b323d1ea 447 Gene3D G3DSA:3.40.1190.10 223 298 2.1E-41 T 25-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SMA_RS07125 fec046153d4d37f9a6b38318b323d1ea 447 Pfam PF08245 Mur ligase middle domain 53 281 6.2E-12 T 25-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SMA_RS07125 fec046153d4d37f9a6b38318b323d1ea 447 SUPERFAMILY SSF53623 39 192 2.98E-33 T 25-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SMA_RS07125 fec046153d4d37f9a6b38318b323d1ea 447 SUPERFAMILY SSF53623 224 296 2.98E-33 T 25-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SMA_RS07125 fec046153d4d37f9a6b38318b323d1ea 447 PANTHER PTHR23135 31 223 4.1E-129 T 25-04-2016 SMA_RS07125 fec046153d4d37f9a6b38318b323d1ea 447 PANTHER PTHR23135 253 439 4.1E-129 T 25-04-2016 SMA_RS07125 fec046153d4d37f9a6b38318b323d1ea 447 PANTHER PTHR23135:SF7 31 223 4.1E-129 T 25-04-2016 SMA_RS07125 fec046153d4d37f9a6b38318b323d1ea 447 PANTHER PTHR23135:SF7 253 439 4.1E-129 T 25-04-2016 SMA_RS07125 fec046153d4d37f9a6b38318b323d1ea 447 Pfam PF08353 Domain of unknown function (DUF1727) 319 429 3.2E-30 T 25-04-2016 IPR013564 Domain of unknown function DUF1727 SMA_RS04460 46e535833244eb2ef7a0c7e05c58dbb2 314 Pfam PF01180 Dihydroorotate dehydrogenase 6 292 1.5E-85 T 25-04-2016 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 SMA_RS04460 46e535833244eb2ef7a0c7e05c58dbb2 314 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 42 61 - T 25-04-2016 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 SMA_RS04460 46e535833244eb2ef7a0c7e05c58dbb2 314 Gene3D G3DSA:3.20.20.70 3 303 4.5E-88 T 25-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SMA_RS04460 46e535833244eb2ef7a0c7e05c58dbb2 314 PIRSF PIRSF000164 1 304 4.6E-76 T 25-04-2016 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 Reactome: REACT_1698 SMA_RS04460 46e535833244eb2ef7a0c7e05c58dbb2 314 Hamap MF_00224 Dihydroorotate dehydrogenase [pyrD]. 6 307 37.681 T 25-04-2016 IPR024920 Dihydroorotate dehydrogenase, class 1 GO:0004152|GO:0005737|GO:0006221 SMA_RS04460 46e535833244eb2ef7a0c7e05c58dbb2 314 SUPERFAMILY SSF51395 3 305 3.36E-78 T 25-04-2016 SMA_RS04460 46e535833244eb2ef7a0c7e05c58dbb2 314 PANTHER PTHR11938 4 304 3.6E-68 T 25-04-2016 SMA_RS04460 46e535833244eb2ef7a0c7e05c58dbb2 314 PANTHER PTHR11938:SF5 4 304 3.6E-68 T 25-04-2016 SMA_RS04460 46e535833244eb2ef7a0c7e05c58dbb2 314 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 245 265 - T 25-04-2016 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 SMA_RS04460 46e535833244eb2ef7a0c7e05c58dbb2 314 TIGRFAM TIGR01037 pyrD_sub1_fam: dihydroorotate dehydrogenase family protein 6 302 1.9E-104 T 25-04-2016 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 SMA_RS01305 9fb6aa1223770c8ee85ec14774d8be41 332 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 1.1E-5 T 25-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SMA_RS01305 9fb6aa1223770c8ee85ec14774d8be41 332 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 1.1E-5 T 25-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SMA_RS01305 9fb6aa1223770c8ee85ec14774d8be41 332 Gene3D G3DSA:3.40.50.2300 109 160 9.2E-5 T 25-04-2016 SMA_RS01305 9fb6aa1223770c8ee85ec14774d8be41 332 Gene3D G3DSA:1.10.260.40 1 48 2.7E-20 T 25-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SMA_RS01305 9fb6aa1223770c8ee85ec14774d8be41 332 SUPERFAMILY SSF53822 74 309 1.9E-43 T 25-04-2016 IPR028082 Periplasmic binding protein-like I SMA_RS01305 9fb6aa1223770c8ee85ec14774d8be41 332 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 25-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SMA_RS01305 9fb6aa1223770c8ee85ec14774d8be41 332 SMART SM00354 1 72 1.8E-13 T 25-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SMA_RS01305 9fb6aa1223770c8ee85ec14774d8be41 332 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 8.2E-18 T 25-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SMA_RS01305 9fb6aa1223770c8ee85ec14774d8be41 332 PANTHER PTHR30146:SF28 1 331 2.9E-130 T 25-04-2016 SMA_RS01305 9fb6aa1223770c8ee85ec14774d8be41 332 PANTHER PTHR30146 1 331 2.9E-130 T 25-04-2016 SMA_RS01305 9fb6aa1223770c8ee85ec14774d8be41 332 Pfam PF13377 Periplasmic binding protein-like domain 165 331 1.5E-35 T 25-04-2016 SMA_RS01305 9fb6aa1223770c8ee85ec14774d8be41 332 Gene3D G3DSA:3.40.50.2300 161 332 1.2E-43 T 25-04-2016 SMA_RS01305 9fb6aa1223770c8ee85ec14774d8be41 332 SUPERFAMILY SSF47413 1 57 9.64E-13 T 25-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SMA_RS03155 616b63dbbe8e5cf884ec9a3c845e3069 289 SUPERFAMILY SSF48576 2 267 4.93E-74 T 25-04-2016 IPR008949 Isoprenoid synthase domain SMA_RS03155 616b63dbbe8e5cf884ec9a3c845e3069 289 PANTHER PTHR12001:SF23 1 249 5.1E-88 T 25-04-2016 SMA_RS03155 616b63dbbe8e5cf884ec9a3c845e3069 289 Gene3D G3DSA:1.10.600.10 3 263 6.1E-78 T 25-04-2016 IPR008949 Isoprenoid synthase domain SMA_RS03155 616b63dbbe8e5cf884ec9a3c845e3069 289 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 205 217 - T 25-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 SMA_RS03155 616b63dbbe8e5cf884ec9a3c845e3069 289 PANTHER PTHR12001 1 249 5.1E-88 T 25-04-2016 IPR017446 Polyprenyl synthetase-related SMA_RS03155 616b63dbbe8e5cf884ec9a3c845e3069 289 Pfam PF00348 Polyprenyl synthetase 25 258 1.0E-49 T 25-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 SMA_RS03155 616b63dbbe8e5cf884ec9a3c845e3069 289 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 75 91 - T 25-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 SMA_RS08120 4b2209aed13964651563ae55658543cf 289 SUPERFAMILY SSF46785 4 109 2.62E-20 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMA_RS08120 4b2209aed13964651563ae55658543cf 289 Gene3D G3DSA:3.40.190.10 173 257 2.0E-23 T 25-04-2016 SMA_RS08120 4b2209aed13964651563ae55658543cf 289 PANTHER PTHR30346 7 283 9.3E-64 T 25-04-2016 SMA_RS08120 4b2209aed13964651563ae55658543cf 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 38 49 8.9E-8 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMA_RS08120 4b2209aed13964651563ae55658543cf 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 28 38 8.9E-8 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMA_RS08120 4b2209aed13964651563ae55658543cf 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 17 28 8.9E-8 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMA_RS08120 4b2209aed13964651563ae55658543cf 289 SUPERFAMILY SSF53850 91 286 3.89E-33 T 25-04-2016 SMA_RS08120 4b2209aed13964651563ae55658543cf 289 Gene3D G3DSA:3.40.190.10 91 172 5.3E-21 T 25-04-2016 SMA_RS08120 4b2209aed13964651563ae55658543cf 289 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 61 4.3E-17 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMA_RS08120 4b2209aed13964651563ae55658543cf 289 Gene3D G3DSA:1.10.10.10 4 85 2.2E-23 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMA_RS08120 4b2209aed13964651563ae55658543cf 289 Pfam PF03466 LysR substrate binding domain 89 280 3.7E-34 T 25-04-2016 IPR005119 LysR, substrate-binding SMA_RS08355 3ee341dd7763ce510135b28c18e3b707 167 Gene3D G3DSA:1.10.3210.10 12 143 6.9E-29 T 25-04-2016 IPR006674 HD domain SMA_RS08355 3ee341dd7763ce510135b28c18e3b707 167 SUPERFAMILY SSF109604 16 144 1.03E-21 T 25-04-2016 SMA_RS08355 3ee341dd7763ce510135b28c18e3b707 167 Pfam PF01966 HD domain 37 105 2.4E-4 T 25-04-2016 IPR006674 HD domain SMA_RS05390 ec80e7ae2c9f23301d1baf8833e881ae 310 PANTHER PTHR22749 1 300 7.9E-103 T 25-04-2016 IPR023468 Riboflavin kinase KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|UniPathway: UPA00276 SMA_RS05390 ec80e7ae2c9f23301d1baf8833e881ae 310 PANTHER PTHR22749:SF3 1 300 7.9E-103 T 25-04-2016 SMA_RS05390 ec80e7ae2c9f23301d1baf8833e881ae 310 Gene3D G3DSA:2.40.30.30 179 306 9.3E-39 T 25-04-2016 IPR023465 Riboflavin kinase domain GO:0008531|GO:0009231 SMA_RS05390 ec80e7ae2c9f23301d1baf8833e881ae 310 SUPERFAMILY SSF52374 20 179 4.07E-29 T 25-04-2016 SMA_RS05390 ec80e7ae2c9f23301d1baf8833e881ae 310 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 20 303 1.7E-78 T 25-04-2016 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 SMA_RS05390 ec80e7ae2c9f23301d1baf8833e881ae 310 SUPERFAMILY SSF82114 172 305 4.58E-43 T 25-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 SMA_RS05390 ec80e7ae2c9f23301d1baf8833e881ae 310 Pfam PF06574 FAD synthetase 13 165 1.2E-46 T 25-04-2016 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 SMA_RS05390 ec80e7ae2c9f23301d1baf8833e881ae 310 PIRSF PIRSF004491 1 309 4.5E-97 T 25-04-2016 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 SMA_RS05390 ec80e7ae2c9f23301d1baf8833e881ae 310 SMART SM00904 181 305 2.0E-53 T 25-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 SMA_RS05390 ec80e7ae2c9f23301d1baf8833e881ae 310 Gene3D G3DSA:3.40.50.620 13 178 6.1E-51 T 25-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SMA_RS05390 ec80e7ae2c9f23301d1baf8833e881ae 310 Pfam PF01687 Riboflavin kinase 182 302 4.3E-31 T 25-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 SMA_RS10400 ef54f4cc58023f0d97989c1262d88764 280 PANTHER PTHR24220:SF435 7 276 2.5E-105 T 25-04-2016 SMA_RS10400 ef54f4cc58023f0d97989c1262d88764 280 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SMA_RS10400 ef54f4cc58023f0d97989c1262d88764 280 Gene3D G3DSA:3.40.50.300 4 239 3.2E-74 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS10400 ef54f4cc58023f0d97989c1262d88764 280 PANTHER PTHR24220 7 276 2.5E-105 T 25-04-2016 SMA_RS10400 ef54f4cc58023f0d97989c1262d88764 280 SMART SM00382 33 218 8.2E-13 T 25-04-2016 IPR003593 AAA+ ATPase domain SMA_RS10400 ef54f4cc58023f0d97989c1262d88764 280 Pfam PF00005 ABC transporter 24 170 2.7E-34 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMA_RS10400 ef54f4cc58023f0d97989c1262d88764 280 TIGRFAM TIGR04520 ECF_ATPase_1: energy-coupling factor transporter ATPase 6 274 1.0E-117 T 25-04-2016 IPR030947 Energy-coupling factor transporter ATP-binding protein EcfA1 SMA_RS10400 ef54f4cc58023f0d97989c1262d88764 280 SUPERFAMILY SSF52540 6 235 2.6E-64 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS02935 aad30be3ac93aa3f0374a2bfb566fdda 193 Gene3D G3DSA:3.20.20.70 2 192 6.0E-62 T 25-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SMA_RS02935 aad30be3ac93aa3f0374a2bfb566fdda 193 PANTHER PTHR22854:SF6 2 192 1.8E-54 T 25-04-2016 SMA_RS02935 aad30be3ac93aa3f0374a2bfb566fdda 193 SUPERFAMILY SSF51366 2 191 1.73E-50 T 25-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 SMA_RS02935 aad30be3ac93aa3f0374a2bfb566fdda 193 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 2 193 34.053 T 25-04-2016 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24|UniPathway: UPA00035 SMA_RS02935 aad30be3ac93aa3f0374a2bfb566fdda 193 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 4 189 6.6E-47 T 25-04-2016 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24|UniPathway: UPA00035 SMA_RS02935 aad30be3ac93aa3f0374a2bfb566fdda 193 PANTHER PTHR22854 2 192 1.8E-54 T 25-04-2016 SMA_RS00430 dcc0968f08f0fddd4e392de0de0f90fa 60 PANTHER PTHR15892:SF2 1 60 1.9E-26 T 25-04-2016 SMA_RS00430 dcc0968f08f0fddd4e392de0de0f90fa 60 PANTHER PTHR15892 1 60 1.9E-26 T 25-04-2016 SMA_RS00430 dcc0968f08f0fddd4e392de0de0f90fa 60 Pfam PF00327 Ribosomal protein L30p/L7e 4 54 3.8E-19 T 25-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain SMA_RS00430 dcc0968f08f0fddd4e392de0de0f90fa 60 PIRSF PIRSF002211 1 60 1.7E-27 T 25-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 SMA_RS00430 dcc0968f08f0fddd4e392de0de0f90fa 60 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 1 58 19.295 T 25-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 SMA_RS00430 dcc0968f08f0fddd4e392de0de0f90fa 60 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 4 58 2.8E-27 T 25-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 SMA_RS00430 dcc0968f08f0fddd4e392de0de0f90fa 60 ProSitePatterns PS00634 Ribosomal protein L30 signature. 22 54 - T 25-04-2016 IPR018038 Ribosomal protein L30, conserved site SMA_RS00430 dcc0968f08f0fddd4e392de0de0f90fa 60 SUPERFAMILY SSF55129 1 59 1.44E-20 T 25-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain SMA_RS00430 dcc0968f08f0fddd4e392de0de0f90fa 60 Gene3D G3DSA:3.30.1390.20 1 59 1.5E-29 T 25-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain SMA_RS02755 ecef432672f64ffc559a83dc795eb4aa 84 Pfam PF08930 Domain of unknown function (DUF1912) 1 84 3.3E-47 T 25-04-2016 IPR015026 Protein of unknown function DUF1912 SMA_RS02755 ecef432672f64ffc559a83dc795eb4aa 84 SUPERFAMILY SSF140121 1 77 8.11E-41 T 25-04-2016 SMA_RS02755 ecef432672f64ffc559a83dc795eb4aa 84 Gene3D G3DSA:1.20.58.90 1 84 7.1E-48 T 25-04-2016 SMA_RS03830 5d3c41fa2fc12011be2499467900db08 1210 Pfam PF12705 PD-(D/E)XK nuclease superfamily 1039 1191 2.3E-8 T 25-04-2016 SMA_RS03830 5d3c41fa2fc12011be2499467900db08 1210 SUPERFAMILY SSF52540 871 897 2.03E-113 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS03830 5d3c41fa2fc12011be2499467900db08 1210 SUPERFAMILY SSF52540 27 199 2.03E-113 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS03830 5d3c41fa2fc12011be2499467900db08 1210 SUPERFAMILY SSF52540 356 813 2.03E-113 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS03830 5d3c41fa2fc12011be2499467900db08 1210 Gene3D G3DSA:1.10.486.10 613 764 4.2E-18 T 25-04-2016 SMA_RS03830 5d3c41fa2fc12011be2499467900db08 1210 Gene3D G3DSA:3.40.50.300 477 602 2.7E-56 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS03830 5d3c41fa2fc12011be2499467900db08 1210 Gene3D G3DSA:3.40.50.300 770 932 2.7E-56 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS03830 5d3c41fa2fc12011be2499467900db08 1210 PANTHER PTHR11070 29 205 4.1E-284 T 25-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 SMA_RS03830 5d3c41fa2fc12011be2499467900db08 1210 PANTHER PTHR11070 330 532 4.1E-284 T 25-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 SMA_RS03830 5d3c41fa2fc12011be2499467900db08 1210 PANTHER PTHR11070 870 1203 4.1E-284 T 25-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 SMA_RS03830 5d3c41fa2fc12011be2499467900db08 1210 PANTHER PTHR11070 764 826 4.1E-284 T 25-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 SMA_RS03830 5d3c41fa2fc12011be2499467900db08 1210 PANTHER PTHR11070 549 747 4.1E-284 T 25-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 SMA_RS03830 5d3c41fa2fc12011be2499467900db08 1210 Hamap MF_01451 ATP-dependent helicase/nuclease subunit A [addA]. 25 1208 16.809 T 25-04-2016 IPR014152 DNA helicase subunit AddA GO:0004003|GO:0006302 SMA_RS03830 5d3c41fa2fc12011be2499467900db08 1210 Pfam PF13361 UvrD-like helicase C-terminal domain 473 893 4.5E-32 T 25-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 SMA_RS03830 5d3c41fa2fc12011be2499467900db08 1210 PANTHER PTHR11070:SF14 29 205 4.1E-284 T 25-04-2016 SMA_RS03830 5d3c41fa2fc12011be2499467900db08 1210 PANTHER PTHR11070:SF14 330 532 4.1E-284 T 25-04-2016 SMA_RS03830 5d3c41fa2fc12011be2499467900db08 1210 PANTHER PTHR11070:SF14 870 1203 4.1E-284 T 25-04-2016 SMA_RS03830 5d3c41fa2fc12011be2499467900db08 1210 PANTHER PTHR11070:SF14 764 826 4.1E-284 T 25-04-2016 SMA_RS03830 5d3c41fa2fc12011be2499467900db08 1210 PANTHER PTHR11070:SF14 549 747 4.1E-284 T 25-04-2016 SMA_RS03830 5d3c41fa2fc12011be2499467900db08 1210 SUPERFAMILY SSF52980 1006 1194 6.43E-23 T 25-04-2016 IPR011335 Restriction endonuclease type II-like SMA_RS03830 5d3c41fa2fc12011be2499467900db08 1210 TIGRFAM TIGR02785 addA_Gpos: helicase-exonuclease AddAB, AddA subunit 28 1205 0.0 T 25-04-2016 IPR014152 DNA helicase subunit AddA GO:0004003|GO:0006302 SMA_RS03830 5d3c41fa2fc12011be2499467900db08 1210 Gene3D G3DSA:3.90.320.10 1039 1191 7.4E-12 T 25-04-2016 IPR011604 Exonuclease, phage-type/RecB, C-terminal GO:0003677|GO:0004518 SMA_RS03830 5d3c41fa2fc12011be2499467900db08 1210 Pfam PF00580 UvrD/REP helicase N-terminal domain 29 464 2.7E-82 T 25-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 SMA_RS03830 5d3c41fa2fc12011be2499467900db08 1210 Gene3D G3DSA:3.40.50.300 366 465 1.6E-65 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS03830 5d3c41fa2fc12011be2499467900db08 1210 Gene3D G3DSA:3.40.50.300 123 186 1.6E-65 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS03830 5d3c41fa2fc12011be2499467900db08 1210 Gene3D G3DSA:3.40.50.300 28 91 1.6E-65 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS00870 3433c9959db787d6b73eec7b3d51641c 277 Pfam PF03613 PTS system mannose/fructose/sorbose family IID component 5 271 8.7E-94 T 25-04-2016 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 SMA_RS00870 3433c9959db787d6b73eec7b3d51641c 277 PANTHER PTHR32502 3 271 4.0E-44 T 25-04-2016 SMA_RS00870 3433c9959db787d6b73eec7b3d51641c 277 PANTHER PTHR32502:SF5 3 271 4.0E-44 T 25-04-2016 SMA_RS00840 3a5004fbafb5a264688ef6cebf92e4b4 438 SUPERFAMILY SSF55874 314 430 6.3E-12 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMA_RS00840 3a5004fbafb5a264688ef6cebf92e4b4 438 Pfam PF07730 Histidine kinase 242 309 1.0E-17 T 25-04-2016 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 SMA_RS00840 3a5004fbafb5a264688ef6cebf92e4b4 438 PANTHER PTHR24421:SF15 178 431 1.2E-45 T 25-04-2016 SMA_RS00840 3a5004fbafb5a264688ef6cebf92e4b4 438 PANTHER PTHR24421 178 431 1.2E-45 T 25-04-2016 SMA_RS00840 3a5004fbafb5a264688ef6cebf92e4b4 438 Gene3D G3DSA:3.30.565.10 310 430 8.8E-6 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMA_RS00840 3a5004fbafb5a264688ef6cebf92e4b4 438 SMART SM00387 347 434 0.0037 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMA_RS02925 e2b1f363a157753a1de76c629e61e6e9 334 Pfam PF02885 Glycosyl transferase family, helical bundle domain 3 64 9.5E-15 T 25-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain SMA_RS02925 e2b1f363a157753a1de76c629e61e6e9 334 Gene3D G3DSA:1.20.970.10 1 65 1.9E-21 T 25-04-2016 SMA_RS02925 e2b1f363a157753a1de76c629e61e6e9 334 PANTHER PTHR11922:SF5 1 332 2.1E-101 T 25-04-2016 SMA_RS02925 e2b1f363a157753a1de76c629e61e6e9 334 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 3 332 34.389 T 25-04-2016 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18|UniPathway: UPA00035 SMA_RS02925 e2b1f363a157753a1de76c629e61e6e9 334 SUPERFAMILY SSF47648 1 65 9.55E-17 T 25-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain SMA_RS02925 e2b1f363a157753a1de76c629e61e6e9 334 Pfam PF00591 Glycosyl transferase family, a/b domain 75 323 2.0E-82 T 25-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 SMA_RS02925 e2b1f363a157753a1de76c629e61e6e9 334 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 6 331 1.2E-103 T 25-04-2016 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18|UniPathway: UPA00035 SMA_RS02925 e2b1f363a157753a1de76c629e61e6e9 334 Gene3D G3DSA:3.40.1030.10 73 333 9.0E-95 T 25-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 SMA_RS02925 e2b1f363a157753a1de76c629e61e6e9 334 PANTHER PTHR11922 1 332 2.1E-101 T 25-04-2016 SMA_RS02925 e2b1f363a157753a1de76c629e61e6e9 334 SUPERFAMILY SSF52418 73 331 1.7E-82 T 25-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 SMA_RS00270 71c52a3eca4695cf8c12e95b31589bc2 515 Gene3D G3DSA:3.40.50.1380 2 186 4.2E-83 T 25-04-2016 IPR011607 Methylglyoxal synthase-like domain SMA_RS00270 71c52a3eca4695cf8c12e95b31589bc2 515 PANTHER PTHR11692 1 515 8.7E-296 T 25-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 SMA_RS00270 71c52a3eca4695cf8c12e95b31589bc2 515 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 2 515 43.857 T 25-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 SMA_RS00270 71c52a3eca4695cf8c12e95b31589bc2 515 Gene3D G3DSA:3.40.140.20 366 505 1.9E-55 T 25-04-2016 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 SMA_RS00270 71c52a3eca4695cf8c12e95b31589bc2 515 SMART SM00851 14 129 7.4E-50 T 25-04-2016 IPR011607 Methylglyoxal synthase-like domain SMA_RS00270 71c52a3eca4695cf8c12e95b31589bc2 515 PIRSF PIRSF000414 1 515 1.9E-206 T 25-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 SMA_RS00270 71c52a3eca4695cf8c12e95b31589bc2 515 SUPERFAMILY SSF53927 208 515 7.22E-119 T 25-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 SMA_RS00270 71c52a3eca4695cf8c12e95b31589bc2 515 SUPERFAMILY SSF52335 2 194 6.41E-70 T 25-04-2016 IPR011607 Methylglyoxal synthase-like domain SMA_RS00270 71c52a3eca4695cf8c12e95b31589bc2 515 PANTHER PTHR11692:SF2 1 515 8.7E-296 T 25-04-2016 SMA_RS00270 71c52a3eca4695cf8c12e95b31589bc2 515 Gene3D G3DSA:3.40.140.20 239 357 3.4E-46 T 25-04-2016 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 SMA_RS00270 71c52a3eca4695cf8c12e95b31589bc2 515 SMART SM00798 134 450 1.7E-188 T 25-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 SMA_RS00270 71c52a3eca4695cf8c12e95b31589bc2 515 Pfam PF02142 MGS-like domain 14 128 4.5E-25 T 25-04-2016 IPR011607 Methylglyoxal synthase-like domain SMA_RS00270 71c52a3eca4695cf8c12e95b31589bc2 515 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 3 515 8.7E-214 T 25-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 SMA_RS00270 71c52a3eca4695cf8c12e95b31589bc2 515 Pfam PF01808 AICARFT/IMPCHase bienzyme 134 448 5.2E-115 T 25-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 SMA_RS06330 3a9457f2c4d38d99a1493329ac9301ef 387 PANTHER PTHR11061 38 386 1.2E-111 T 25-04-2016 SMA_RS06330 3a9457f2c4d38d99a1493329ac9301ef 387 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 169 363 1.3E-29 T 25-04-2016 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 SMA_RS06330 3a9457f2c4d38d99a1493329ac9301ef 387 SUPERFAMILY SSF88697 1 67 2.14E-17 T 25-04-2016 IPR015947 PUA-like domain SMA_RS06330 3a9457f2c4d38d99a1493329ac9301ef 387 Gene3D G3DSA:3.40.50.150 111 386 5.2E-67 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMA_RS06330 3a9457f2c4d38d99a1493329ac9301ef 387 SUPERFAMILY SSF53335 74 370 4.38E-63 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMA_RS06330 3a9457f2c4d38d99a1493329ac9301ef 387 PANTHER PTHR11061:SF15 38 386 1.2E-111 T 25-04-2016 SMA_RS09425 105bfb162dc21a301d2ed13d70eec747 424 Pfam PF04915 DltD N-terminal region 38 99 4.1E-26 T 25-04-2016 IPR006999 DltD, N-terminal UniPathway: UPA00556 SMA_RS09425 105bfb162dc21a301d2ed13d70eec747 424 TIGRFAM TIGR04092 LTA_DltD: D-alanyl-lipoteichoic acid biosynthesis protein DltD 9 390 3.0E-136 T 25-04-2016 IPR023896 D-alanyl-lipoteichoic acid biosynthesis DltD UniPathway: UPA00556 SMA_RS09425 105bfb162dc21a301d2ed13d70eec747 424 PIRSF PIRSF021438 1 393 1.4E-129 T 25-04-2016 IPR023896 D-alanyl-lipoteichoic acid biosynthesis DltD UniPathway: UPA00556 SMA_RS09425 105bfb162dc21a301d2ed13d70eec747 424 Pfam PF04918 DltD central region 100 262 8.2E-50 T 25-04-2016 IPR007002 DltD, central domain UniPathway: UPA00556 SMA_RS09425 105bfb162dc21a301d2ed13d70eec747 424 PANTHER PTHR40039 2 421 3.9E-113 T 25-04-2016 SMA_RS09425 105bfb162dc21a301d2ed13d70eec747 424 Pfam PF04914 DltD C-terminal region 264 391 1.7E-50 T 25-04-2016 IPR006998 DltD, C-terminal UniPathway: UPA00556 SMA_RS09425 105bfb162dc21a301d2ed13d70eec747 424 PANTHER PTHR40039:SF1 2 421 3.9E-113 T 25-04-2016 SMA_RS08460 c845003ef39d9b27efb24c89a0b0b13b 165 PANTHER PTHR30455:SF2 2 156 4.6E-68 T 25-04-2016 SMA_RS08460 c845003ef39d9b27efb24c89a0b0b13b 165 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 145 5.2E-59 T 25-04-2016 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 SMA_RS08460 c845003ef39d9b27efb24c89a0b0b13b 165 Pfam PF03477 ATP cone domain 50 136 1.3E-18 T 25-04-2016 IPR005144 ATP-cone domain SMA_RS08460 c845003ef39d9b27efb24c89a0b0b13b 165 PANTHER PTHR30455 2 156 4.6E-68 T 25-04-2016 SMA_RS08460 c845003ef39d9b27efb24c89a0b0b13b 165 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 155 82.581 T 25-04-2016 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 SMA_RS00805 3f3e3e24fe47a4fd72a2676c493189f6 105 PANTHER PTHR10438:SF301 1 104 1.7E-43 T 25-04-2016 SMA_RS00805 3f3e3e24fe47a4fd72a2676c493189f6 105 Gene3D G3DSA:3.40.30.10 10 102 3.1E-23 T 25-04-2016 IPR012336 Thioredoxin-like fold SMA_RS00805 3f3e3e24fe47a4fd72a2676c493189f6 105 PANTHER PTHR10438 1 104 1.7E-43 T 25-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 SMA_RS00805 3f3e3e24fe47a4fd72a2676c493189f6 105 Pfam PF00085 Thioredoxin 13 101 7.2E-16 T 25-04-2016 IPR013766 Thioredoxin domain GO:0045454 SMA_RS00805 3f3e3e24fe47a4fd72a2676c493189f6 105 SUPERFAMILY SSF52833 4 101 4.87E-25 T 25-04-2016 IPR012336 Thioredoxin-like fold SMA_RS10535 0cc2de0f5df2a7cd35f58602f41e34be 159 TIGRFAM TIGR00246 tRNA_RlmH_YbeA: rRNA large subunit m3Psi methyltransferase RlmH 2 159 2.9E-52 T 25-04-2016 IPR016051 Ribosomal RNA large subunit methyltransferase H GO:0005737|GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SMA_RS10535 0cc2de0f5df2a7cd35f58602f41e34be 159 PANTHER PTHR33603 1 159 4.8E-65 T 25-04-2016 SMA_RS10535 0cc2de0f5df2a7cd35f58602f41e34be 159 PIRSF PIRSF004505 1 159 1.8E-54 T 25-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SMA_RS10535 0cc2de0f5df2a7cd35f58602f41e34be 159 PANTHER PTHR33603:SF1 1 159 4.8E-65 T 25-04-2016 SMA_RS10535 0cc2de0f5df2a7cd35f58602f41e34be 159 SUPERFAMILY SSF75217 1 157 1.64E-58 T 25-04-2016 IPR029028 Alpha/beta knot methyltransferases SMA_RS10535 0cc2de0f5df2a7cd35f58602f41e34be 159 Pfam PF02590 Predicted SPOUT methyltransferase 1 158 2.0E-58 T 25-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SMA_RS10535 0cc2de0f5df2a7cd35f58602f41e34be 159 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 159 30.638 T 25-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SMA_RS10535 0cc2de0f5df2a7cd35f58602f41e34be 159 Gene3D G3DSA:3.40.1280.10 1 159 5.4E-63 T 25-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal SMA_RS02300 8d8db6918ba7ae109404300f8c78698a 679 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 2 676 26.169 T 25-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SMA_RS02300 8d8db6918ba7ae109404300f8c78698a 679 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 49 61 3.1E-32 T 25-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SMA_RS02300 8d8db6918ba7ae109404300f8c78698a 679 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 6 19 3.1E-32 T 25-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SMA_RS02300 8d8db6918ba7ae109404300f8c78698a 679 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 314 330 3.1E-32 T 25-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SMA_RS02300 8d8db6918ba7ae109404300f8c78698a 679 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 393 412 3.1E-32 T 25-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SMA_RS02300 8d8db6918ba7ae109404300f8c78698a 679 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 242 257 3.1E-32 T 25-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SMA_RS02300 8d8db6918ba7ae109404300f8c78698a 679 PANTHER PTHR30075:SF2 1 679 0.0 T 25-04-2016 SMA_RS02300 8d8db6918ba7ae109404300f8c78698a 679 SUPERFAMILY SSF109604 338 491 9.42E-16 T 25-04-2016 SMA_RS02300 8d8db6918ba7ae109404300f8c78698a 679 PANTHER PTHR30075 1 679 0.0 T 25-04-2016 SMA_RS02300 8d8db6918ba7ae109404300f8c78698a 679 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 3 676 6.7E-213 T 25-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SMA_RS02300 8d8db6918ba7ae109404300f8c78698a 679 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 5 548 5.9E-198 T 25-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SMA_RS03825 41c146cf7f83c017a92eb59ab9f0af25 1080 SUPERFAMILY SSF52980 748 928 5.09E-10 T 25-04-2016 IPR011335 Restriction endonuclease type II-like SMA_RS03825 41c146cf7f83c017a92eb59ab9f0af25 1080 Hamap MF_01453 ATP-dependent helicase/deoxyribonuclease subunit B [rexB]. 1 1077 41.682 T 25-04-2016 IPR014141 DNA helicase subunit RexB GO:0016788|GO:0016817 SMA_RS03825 41c146cf7f83c017a92eb59ab9f0af25 1080 PANTHER PTHR30591 5 1073 4.3E-72 T 25-04-2016 SMA_RS03825 41c146cf7f83c017a92eb59ab9f0af25 1080 Pfam PF12705 PD-(D/E)XK nuclease superfamily 748 1026 4.8E-29 T 25-04-2016 SMA_RS03825 41c146cf7f83c017a92eb59ab9f0af25 1080 SUPERFAMILY SSF52540 293 649 5.05E-38 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS03825 41c146cf7f83c017a92eb59ab9f0af25 1080 PANTHER PTHR30591:SF1 5 1073 4.3E-72 T 25-04-2016 SMA_RS03825 41c146cf7f83c017a92eb59ab9f0af25 1080 TIGRFAM TIGR02774 rexB_recomb: ATP-dependent nuclease subunit B 2 1071 0.0 T 25-04-2016 IPR014141 DNA helicase subunit RexB GO:0016788|GO:0016817 SMA_RS03825 41c146cf7f83c017a92eb59ab9f0af25 1080 Gene3D G3DSA:3.40.50.300 283 360 3.8E-7 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS04815 b4b3500a8ff48b3ebfcfbf571fc7415c 327 SUPERFAMILY SSF51412 5 316 2.09E-91 T 25-04-2016 SMA_RS04815 b4b3500a8ff48b3ebfcfbf571fc7415c 327 PANTHER PTHR11911 171 316 1.0E-151 T 25-04-2016 SMA_RS04815 b4b3500a8ff48b3ebfcfbf571fc7415c 327 PANTHER PTHR11911 10 153 1.0E-151 T 25-04-2016 SMA_RS04815 b4b3500a8ff48b3ebfcfbf571fc7415c 327 PANTHER PTHR11911:SF97 171 316 1.0E-151 T 25-04-2016 SMA_RS04815 b4b3500a8ff48b3ebfcfbf571fc7415c 327 PANTHER PTHR11911:SF97 10 153 1.0E-151 T 25-04-2016 SMA_RS04815 b4b3500a8ff48b3ebfcfbf571fc7415c 327 SMART SM01240 6 327 1.3E-106 T 25-04-2016 SMA_RS04815 b4b3500a8ff48b3ebfcfbf571fc7415c 327 PIRSF PIRSF036500 3 327 2.3E-190 T 25-04-2016 IPR005994 Guanosine monophosphate reductase, type2 GO:0003920|GO:0006163|GO:1902560 KEGG: 00230+1.7.1.7 SMA_RS04815 b4b3500a8ff48b3ebfcfbf571fc7415c 327 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 166 178 - T 25-04-2016 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 Reactome: REACT_1698 SMA_RS04815 b4b3500a8ff48b3ebfcfbf571fc7415c 327 Hamap MF_01511 GMP reductase [guaC]. 5 326 62.503 T 25-04-2016 IPR005994 Guanosine monophosphate reductase, type2 GO:0003920|GO:0006163|GO:1902560 KEGG: 00230+1.7.1.7 SMA_RS04815 b4b3500a8ff48b3ebfcfbf571fc7415c 327 Gene3D G3DSA:3.20.20.70 7 320 5.8E-85 T 25-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SMA_RS04815 b4b3500a8ff48b3ebfcfbf571fc7415c 327 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 9 311 2.3E-68 T 25-04-2016 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 Reactome: REACT_1698 SMA_RS04815 b4b3500a8ff48b3ebfcfbf571fc7415c 327 TIGRFAM TIGR01306 GMP_reduct_2: guanosine monophosphate reductase 7 325 3.5E-198 T 25-04-2016 IPR005994 Guanosine monophosphate reductase, type2 GO:0003920|GO:0006163|GO:1902560 KEGG: 00230+1.7.1.7 SMA_RS05725 b36140e55e2a2346375c44d1fba369d0 171 PANTHER PTHR30345:SF4 1 171 3.2E-124 T 25-04-2016 SMA_RS05725 b36140e55e2a2346375c44d1fba369d0 171 Gene3D G3DSA:3.40.1400.10 1 152 6.7E-52 T 25-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 SMA_RS05725 b36140e55e2a2346375c44d1fba369d0 171 TIGRFAM TIGR00689 rpiB_lacA_lacB: sugar-phosphate isomerase, RpiB/LacA/LacB family 3 146 7.0E-35 T 25-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 SMA_RS05725 b36140e55e2a2346375c44d1fba369d0 171 SUPERFAMILY SSF89623 1 148 1.29E-47 T 25-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 SMA_RS05725 b36140e55e2a2346375c44d1fba369d0 171 Hamap MF_01556 Galactose-6-phosphate isomerase subunit LacB [lacB]. 1 171 48.118 T 25-04-2016 IPR004784 Galactose-6-phosphate isomerase subunit LacB GO:0005990|GO:0016861|GO:0050044 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 SMA_RS05725 b36140e55e2a2346375c44d1fba369d0 171 PIRSF PIRSF005384 1 148 1.0E-48 T 25-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 SMA_RS05725 b36140e55e2a2346375c44d1fba369d0 171 TIGRFAM TIGR01119 lacB: galactose-6-phosphate isomerase, LacB subunit 1 171 6.5E-104 T 25-04-2016 IPR004784 Galactose-6-phosphate isomerase subunit LacB GO:0005990|GO:0016861|GO:0050044 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 SMA_RS05725 b36140e55e2a2346375c44d1fba369d0 171 PANTHER PTHR30345 1 171 3.2E-124 T 25-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 SMA_RS05725 b36140e55e2a2346375c44d1fba369d0 171 Pfam PF02502 Ribose/Galactose Isomerase 3 141 7.0E-41 T 25-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 SMA_RS06110 94c76fa65ee7e232e24879e502a4619a 744 Gene3D G3DSA:3.20.20.210 392 742 1.9E-115 T 25-04-2016 SMA_RS06110 94c76fa65ee7e232e24879e502a4619a 744 PANTHER PTHR30519:SF0 1 744 0.0 T 25-04-2016 SMA_RS06110 94c76fa65ee7e232e24879e502a4619a 744 Pfam PF08267 Cobalamin-independent synthase, N-terminal domain 4 308 1.6E-109 T 25-04-2016 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal GO:0003871|GO:0008270|GO:0008652 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 SMA_RS06110 94c76fa65ee7e232e24879e502a4619a 744 Hamap MF_00172 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [metE]. 2 741 32.956 T 25-04-2016 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 SMA_RS06110 94c76fa65ee7e232e24879e502a4619a 744 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 414 736 1.6E-139 T 25-04-2016 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 SMA_RS06110 94c76fa65ee7e232e24879e502a4619a 744 SUPERFAMILY SSF51726 390 740 2.09E-103 T 25-04-2016 SMA_RS06110 94c76fa65ee7e232e24879e502a4619a 744 SUPERFAMILY SSF51726 5 368 8.89E-91 T 25-04-2016 SMA_RS06110 94c76fa65ee7e232e24879e502a4619a 744 TIGRFAM TIGR01371 met_syn_B12ind: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase 7 741 0.0 T 25-04-2016 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 SMA_RS06110 94c76fa65ee7e232e24879e502a4619a 744 PANTHER PTHR30519 1 744 0.0 T 25-04-2016 SMA_RS06110 94c76fa65ee7e232e24879e502a4619a 744 Gene3D G3DSA:3.20.20.210 4 375 2.1E-122 T 25-04-2016 SMA_RS06110 94c76fa65ee7e232e24879e502a4619a 744 PIRSF PIRSF000382 1 744 7.4E-303 T 25-04-2016 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 SMA_RS04775 ed84fa27a094c004235a31d5b7731677 251 PANTHER PTHR24322:SF392 7 134 1.0E-73 T 25-04-2016 SMA_RS04775 ed84fa27a094c004235a31d5b7731677 251 PANTHER PTHR24322:SF392 150 182 1.0E-73 T 25-04-2016 SMA_RS04775 ed84fa27a094c004235a31d5b7731677 251 PANTHER PTHR24322 7 134 1.0E-73 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMA_RS04775 ed84fa27a094c004235a31d5b7731677 251 PANTHER PTHR24322 150 182 1.0E-73 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMA_RS04775 ed84fa27a094c004235a31d5b7731677 251 SUPERFAMILY SSF51735 3 233 6.25E-61 T 25-04-2016 IPR016040 NAD(P)-binding domain SMA_RS04775 ed84fa27a094c004235a31d5b7731677 251 Gene3D G3DSA:3.40.50.720 2 235 5.1E-64 T 25-04-2016 IPR016040 NAD(P)-binding domain SMA_RS04775 ed84fa27a094c004235a31d5b7731677 251 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 137 165 - T 25-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 SMA_RS04775 ed84fa27a094c004235a31d5b7731677 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 8.7E-27 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMA_RS04775 ed84fa27a094c004235a31d5b7731677 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 205 225 8.7E-27 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMA_RS04775 ed84fa27a094c004235a31d5b7731677 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 76 87 8.7E-27 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMA_RS04775 ed84fa27a094c004235a31d5b7731677 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 188 8.7E-27 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMA_RS04775 ed84fa27a094c004235a31d5b7731677 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 124 140 8.7E-27 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMA_RS04775 ed84fa27a094c004235a31d5b7731677 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 150 169 8.7E-27 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMA_RS04775 ed84fa27a094c004235a31d5b7731677 251 Pfam PF00106 short chain dehydrogenase 3 190 2.7E-54 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMA_RS04775 ed84fa27a094c004235a31d5b7731677 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 130 138 9.1E-10 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMA_RS04775 ed84fa27a094c004235a31d5b7731677 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 150 169 9.1E-10 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMA_RS04775 ed84fa27a094c004235a31d5b7731677 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 76 87 9.1E-10 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMA_RS04090 6d41b2fee645e8a20e830cf05d396e3f 334 SUPERFAMILY SSF52922 194 328 9.82E-41 T 25-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 SMA_RS04090 6d41b2fee645e8a20e830cf05d396e3f 334 Gene3D G3DSA:3.40.50.920 198 328 5.0E-44 T 25-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 SMA_RS04090 6d41b2fee645e8a20e830cf05d396e3f 334 Gene3D G3DSA:3.40.50.970 4 197 1.3E-79 T 25-04-2016 IPR029061 Thiamin diphosphate-binding fold SMA_RS04090 6d41b2fee645e8a20e830cf05d396e3f 334 PANTHER PTHR11624 1 328 1.9E-161 T 25-04-2016 IPR033247 Transketolase family SMA_RS04090 6d41b2fee645e8a20e830cf05d396e3f 334 SUPERFAMILY SSF52518 6 195 1.13E-64 T 25-04-2016 IPR029061 Thiamin diphosphate-binding fold SMA_RS04090 6d41b2fee645e8a20e830cf05d396e3f 334 Pfam PF02779 Transketolase, pyrimidine binding domain 6 181 2.7E-46 T 25-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain SMA_RS04090 6d41b2fee645e8a20e830cf05d396e3f 334 PANTHER PTHR11624:SF78 1 328 1.9E-161 T 25-04-2016 SMA_RS04090 6d41b2fee645e8a20e830cf05d396e3f 334 SMART SM00861 7 182 5.1E-63 T 25-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain SMA_RS04090 6d41b2fee645e8a20e830cf05d396e3f 334 Pfam PF02780 Transketolase, C-terminal domain 197 320 5.7E-39 T 25-04-2016 IPR033248 Transketolase, C-terminal domain SMA_RS00015 153549e4a44b2629f51ef419df2b3db8 218 SMART SM00046 2 122 0.0021 T 25-04-2016 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 SMA_RS00015 153549e4a44b2629f51ef419df2b3db8 218 Pfam PF00781 Diacylglycerol kinase catalytic domain 3 112 5.3E-18 T 25-04-2016 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 SMA_RS00015 153549e4a44b2629f51ef419df2b3db8 218 SUPERFAMILY SSF111331 1 211 8.37E-31 T 25-04-2016 IPR016064 NAD kinase/diacylglycerol kinase-like domain SMA_RS04035 10f4166494df37935ae2f07dc79b2d38 252 SMART SM00382 34 229 2.8E-8 T 25-04-2016 IPR003593 AAA+ ATPase domain SMA_RS04035 10f4166494df37935ae2f07dc79b2d38 252 PANTHER PTHR24220 6 252 9.5E-92 T 25-04-2016 SMA_RS04035 10f4166494df37935ae2f07dc79b2d38 252 SUPERFAMILY SSF52540 4 238 4.22E-50 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS04035 10f4166494df37935ae2f07dc79b2d38 252 Gene3D G3DSA:3.40.50.300 2 241 4.4E-56 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS04035 10f4166494df37935ae2f07dc79b2d38 252 Pfam PF00005 ABC transporter 25 180 5.5E-27 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMA_RS04035 10f4166494df37935ae2f07dc79b2d38 252 PANTHER PTHR24220:SF534 6 252 9.5E-92 T 25-04-2016 SMA_RS04035 10f4166494df37935ae2f07dc79b2d38 252 ProSitePatterns PS00211 ABC transporters family signature. 152 166 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SMA_RS09980 b6c766d8837029f2cda50f6fa0703abd 140 SMART SM00881 16 110 3.4E-16 T 25-04-2016 IPR003781 CoA-binding GO:0048037 SMA_RS09980 b6c766d8837029f2cda50f6fa0703abd 140 Gene3D G3DSA:3.40.50.720 9 139 1.0E-42 T 25-04-2016 IPR016040 NAD(P)-binding domain SMA_RS09980 b6c766d8837029f2cda50f6fa0703abd 140 Pfam PF13380 CoA binding domain 20 137 1.9E-32 T 25-04-2016 IPR003781 CoA-binding GO:0048037 SMA_RS09980 b6c766d8837029f2cda50f6fa0703abd 140 SUPERFAMILY SSF51735 11 138 7.22E-37 T 25-04-2016 IPR016040 NAD(P)-binding domain SMA_RS09980 b6c766d8837029f2cda50f6fa0703abd 140 PANTHER PTHR33303 4 137 8.8E-43 T 25-04-2016 SMA_RS01395 7e2a84b140ad57f771363fe7da023ae3 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 10 88 4.0E-39 T 25-04-2016 SMA_RS01395 7e2a84b140ad57f771363fe7da023ae3 89 Pfam PF00312 Ribosomal protein S15 8 88 4.4E-34 T 25-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS01395 7e2a84b140ad57f771363fe7da023ae3 89 Gene3D G3DSA:1.10.287.10 3 89 2.0E-38 T 25-04-2016 IPR009068 S15/NS1, RNA-binding Reactome: REACT_71 SMA_RS01395 7e2a84b140ad57f771363fe7da023ae3 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 5 89 1.6E-36 T 25-04-2016 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 SMA_RS01395 7e2a84b140ad57f771363fe7da023ae3 89 SMART SM01387 8 88 3.2E-46 T 25-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS01395 7e2a84b140ad57f771363fe7da023ae3 89 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 25-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS01395 7e2a84b140ad57f771363fe7da023ae3 89 SUPERFAMILY SSF47060 3 89 3.53E-34 T 25-04-2016 IPR009068 S15/NS1, RNA-binding Reactome: REACT_71 SMA_RS01395 7e2a84b140ad57f771363fe7da023ae3 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 21.678 T 25-04-2016 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 SMA_RS01395 7e2a84b140ad57f771363fe7da023ae3 89 PANTHER PTHR23321 1 89 2.3E-43 T 25-04-2016 SMA_RS10235 e7636d29a9bf03657d8dd3785e7ec48a 425 Gene3D G3DSA:3.40.50.800 326 417 1.1E-28 T 25-04-2016 IPR004154 Anticodon-binding SMA_RS10235 e7636d29a9bf03657d8dd3785e7ec48a 425 Pfam PF13393 Histidyl-tRNA synthetase 8 312 4.4E-45 T 25-04-2016 SMA_RS10235 e7636d29a9bf03657d8dd3785e7ec48a 425 PIRSF PIRSF001549 1 420 4.0E-123 T 25-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 SMA_RS10235 e7636d29a9bf03657d8dd3785e7ec48a 425 SUPERFAMILY SSF55681 3 320 2.49E-99 T 25-04-2016 SMA_RS10235 e7636d29a9bf03657d8dd3785e7ec48a 425 SUPERFAMILY SSF52954 328 421 4.74E-24 T 25-04-2016 IPR004154 Anticodon-binding SMA_RS10235 e7636d29a9bf03657d8dd3785e7ec48a 425 Pfam PF03129 Anticodon binding domain 330 417 4.9E-13 T 25-04-2016 IPR004154 Anticodon-binding SMA_RS10235 e7636d29a9bf03657d8dd3785e7ec48a 425 PANTHER PTHR11476 1 425 8.4E-215 T 25-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 SMA_RS10235 e7636d29a9bf03657d8dd3785e7ec48a 425 Gene3D G3DSA:3.30.930.10 1 185 4.5E-100 T 25-04-2016 SMA_RS10235 e7636d29a9bf03657d8dd3785e7ec48a 425 Gene3D G3DSA:3.30.930.10 221 321 4.5E-100 T 25-04-2016 SMA_RS10235 e7636d29a9bf03657d8dd3785e7ec48a 425 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 1 423 33.78 T 25-04-2016 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21|Reactome: REACT_71 SMA_RS10235 e7636d29a9bf03657d8dd3785e7ec48a 425 PANTHER PTHR11476:SF9 1 425 8.4E-215 T 25-04-2016 SMA_RS10235 e7636d29a9bf03657d8dd3785e7ec48a 425 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 4 409 2.6E-156 T 25-04-2016 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21|Reactome: REACT_71 SMA_RS06500 f5e066e94e79f123faa220aa50d8a367 367 Pfam PF04545 Sigma-70, region 4 301 354 2.3E-19 T 25-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMA_RS06500 f5e066e94e79f123faa220aa50d8a367 367 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 157 170 - T 25-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMA_RS06500 f5e066e94e79f123faa220aa50d8a367 367 PRINTS PR00046 Major sigma-70 factor signature 305 317 1.3E-31 T 25-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMA_RS06500 f5e066e94e79f123faa220aa50d8a367 367 PRINTS PR00046 Major sigma-70 factor signature 181 189 1.3E-31 T 25-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMA_RS06500 f5e066e94e79f123faa220aa50d8a367 367 PRINTS PR00046 Major sigma-70 factor signature 341 352 1.3E-31 T 25-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMA_RS06500 f5e066e94e79f123faa220aa50d8a367 367 PRINTS PR00046 Major sigma-70 factor signature 157 170 1.3E-31 T 25-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMA_RS06500 f5e066e94e79f123faa220aa50d8a367 367 PRINTS PR00046 Major sigma-70 factor signature 326 341 1.3E-31 T 25-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMA_RS06500 f5e066e94e79f123faa220aa50d8a367 367 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 129 365 2.3E-125 T 25-04-2016 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 SMA_RS06500 f5e066e94e79f123faa220aa50d8a367 367 Gene3D G3DSA:1.10.10.10 295 366 4.5E-34 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMA_RS06500 f5e066e94e79f123faa220aa50d8a367 367 Pfam PF00140 Sigma-70 factor, region 1.2 95 127 1.4E-14 T 25-04-2016 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMA_RS06500 f5e066e94e79f123faa220aa50d8a367 367 Gene3D G3DSA:1.10.10.10 206 257 2.4E-26 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMA_RS06500 f5e066e94e79f123faa220aa50d8a367 367 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 326 352 - T 25-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMA_RS06500 f5e066e94e79f123faa220aa50d8a367 367 Pfam PF03979 Sigma-70 factor, region 1.1 11 84 1.5E-8 T 25-04-2016 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 SMA_RS06500 f5e066e94e79f123faa220aa50d8a367 367 Pfam PF04542 Sigma-70 region 2 133 202 5.2E-23 T 25-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMA_RS06500 f5e066e94e79f123faa220aa50d8a367 367 SUPERFAMILY SSF88946 94 203 9.42E-53 T 25-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMA_RS06500 f5e066e94e79f123faa220aa50d8a367 367 SUPERFAMILY SSF88659 206 280 1.47E-21 T 25-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMA_RS06500 f5e066e94e79f123faa220aa50d8a367 367 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 129 354 3.3E-38 T 25-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMA_RS06500 f5e066e94e79f123faa220aa50d8a367 367 Gene3D G3DSA:1.10.601.10 21 202 1.4E-73 T 25-04-2016 SMA_RS06500 f5e066e94e79f123faa220aa50d8a367 367 Pfam PF04539 Sigma-70 region 3 212 288 3.3E-30 T 25-04-2016 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMA_RS06500 f5e066e94e79f123faa220aa50d8a367 367 PANTHER PTHR30603:SF0 2 366 5.6E-202 T 25-04-2016 SMA_RS06500 f5e066e94e79f123faa220aa50d8a367 367 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 5 366 32.981 T 25-04-2016 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 SMA_RS06500 f5e066e94e79f123faa220aa50d8a367 367 PANTHER PTHR30603 2 366 5.6E-202 T 25-04-2016 SMA_RS06500 f5e066e94e79f123faa220aa50d8a367 367 SUPERFAMILY SSF88659 263 364 1.14E-28 T 25-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMA_RS01275 32d620b8eac4b0970cc5f90363164a3a 720 PANTHER PTHR22762:SF81 325 671 4.2E-76 T 25-04-2016 SMA_RS01275 32d620b8eac4b0970cc5f90363164a3a 720 PANTHER PTHR22762 325 671 4.2E-76 T 25-04-2016 SMA_RS01275 32d620b8eac4b0970cc5f90363164a3a 720 ProSitePatterns PS00512 Alpha-galactosidase signature. 353 368 - T 25-04-2016 IPR000111 Glycoside hydrolase family 27/36, conserved site GO:0004553|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 SMA_RS01275 32d620b8eac4b0970cc5f90363164a3a 720 Pfam PF16874 Glycosyl hydrolase family 36 C-terminal domain 642 717 3.5E-15 T 25-04-2016 IPR031705 Glycosyl hydrolase family 36, C-terminal KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 SMA_RS01275 32d620b8eac4b0970cc5f90363164a3a 720 PIRSF PIRSF005536 1 720 1.0E-267 T 25-04-2016 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 SMA_RS01275 32d620b8eac4b0970cc5f90363164a3a 720 Pfam PF16875 Glycosyl hydrolase family 36 N-terminal domain 26 278 4.8E-70 T 25-04-2016 IPR031704 Glycosyl hydrolase family 36, N-terminal KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 SMA_RS01275 32d620b8eac4b0970cc5f90363164a3a 720 SUPERFAMILY SSF51445 319 651 1.09E-102 T 25-04-2016 IPR017853 Glycoside hydrolase superfamily SMA_RS01275 32d620b8eac4b0970cc5f90363164a3a 720 PRINTS PR00743 Glycosyl hydrolase family 36 signature 402 424 1.2E-59 T 25-04-2016 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 SMA_RS01275 32d620b8eac4b0970cc5f90363164a3a 720 PRINTS PR00743 Glycosyl hydrolase family 36 signature 513 529 1.2E-59 T 25-04-2016 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 SMA_RS01275 32d620b8eac4b0970cc5f90363164a3a 720 PRINTS PR00743 Glycosyl hydrolase family 36 signature 460 475 1.2E-59 T 25-04-2016 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 SMA_RS01275 32d620b8eac4b0970cc5f90363164a3a 720 PRINTS PR00743 Glycosyl hydrolase family 36 signature 286 306 1.2E-59 T 25-04-2016 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 SMA_RS01275 32d620b8eac4b0970cc5f90363164a3a 720 PRINTS PR00743 Glycosyl hydrolase family 36 signature 235 250 1.2E-59 T 25-04-2016 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 SMA_RS01275 32d620b8eac4b0970cc5f90363164a3a 720 PRINTS PR00743 Glycosyl hydrolase family 36 signature 538 554 1.2E-59 T 25-04-2016 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 SMA_RS01275 32d620b8eac4b0970cc5f90363164a3a 720 PRINTS PR00743 Glycosyl hydrolase family 36 signature 352 367 1.2E-59 T 25-04-2016 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 SMA_RS01275 32d620b8eac4b0970cc5f90363164a3a 720 PRINTS PR00743 Glycosyl hydrolase family 36 signature 324 338 1.2E-59 T 25-04-2016 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 SMA_RS01275 32d620b8eac4b0970cc5f90363164a3a 720 Pfam PF02065 Melibiase 283 628 1.5E-157 T 25-04-2016 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 SMA_RS01275 32d620b8eac4b0970cc5f90363164a3a 720 Gene3D G3DSA:3.20.20.70 321 619 1.9E-47 T 25-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SMA_RS02805 fb141604c932412eda1fa40e3838e76a 330 Pfam PF03590 Aspartate-ammonia ligase 9 244 4.0E-95 T 25-04-2016 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1|UniPathway: UPA00134 SMA_RS02805 fb141604c932412eda1fa40e3838e76a 330 PANTHER PTHR30073:SF5 1 330 3.8E-198 T 25-04-2016 SMA_RS02805 fb141604c932412eda1fa40e3838e76a 330 SUPERFAMILY SSF55681 5 330 2.88E-100 T 25-04-2016 SMA_RS02805 fb141604c932412eda1fa40e3838e76a 330 Gene3D G3DSA:3.30.930.10 2 327 1.4E-155 T 25-04-2016 SMA_RS02805 fb141604c932412eda1fa40e3838e76a 330 Hamap MF_00555 Aspartate--ammonia ligase [asnA]. 1 330 47.24 T 25-04-2016 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1|UniPathway: UPA00134 SMA_RS02805 fb141604c932412eda1fa40e3838e76a 330 PANTHER PTHR30073 1 330 3.8E-198 T 25-04-2016 SMA_RS02805 fb141604c932412eda1fa40e3838e76a 330 TIGRFAM TIGR00669 asnA: aspartate--ammonia ligase 1 330 1.1E-180 T 25-04-2016 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1|UniPathway: UPA00134 SMA_RS02805 fb141604c932412eda1fa40e3838e76a 330 PIRSF PIRSF001555 1 330 3.9E-157 T 25-04-2016 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1|UniPathway: UPA00134 SMA_RS02030 a85021227471a4072d0917201c1dfb28 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 116 136 1.8E-13 T 25-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SMA_RS02030 a85021227471a4072d0917201c1dfb28 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 50 66 1.8E-13 T 25-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SMA_RS02030 a85021227471a4072d0917201c1dfb28 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 67 82 1.8E-13 T 25-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SMA_RS02030 a85021227471a4072d0917201c1dfb28 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 86 102 1.8E-13 T 25-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SMA_RS02030 a85021227471a4072d0917201c1dfb28 144 Pfam PF01047 MarR family 34 91 8.2E-13 T 25-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SMA_RS02030 a85021227471a4072d0917201c1dfb28 144 Gene3D G3DSA:1.10.10.10 2 142 3.7E-35 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMA_RS02030 a85021227471a4072d0917201c1dfb28 144 SMART SM00347 26 125 2.5E-15 T 25-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SMA_RS02030 a85021227471a4072d0917201c1dfb28 144 PANTHER PTHR33164 31 144 1.9E-21 T 25-04-2016 SMA_RS02030 a85021227471a4072d0917201c1dfb28 144 SUPERFAMILY SSF46785 6 142 5.26E-29 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMA_RS02220 52d210f8b1cfbe5cded22d339eadd21d 908 Pfam PF11987 Translation-initiation factor 2 695 800 7.7E-38 T 25-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 SMA_RS02220 52d210f8b1cfbe5cded22d339eadd21d 908 Gene3D G3DSA:3.40.50.10050 710 789 9.1E-29 T 25-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 SMA_RS02220 52d210f8b1cfbe5cded22d339eadd21d 908 Gene3D G3DSA:2.40.30.10 812 908 6.4E-34 T 25-04-2016 SMA_RS02220 52d210f8b1cfbe5cded22d339eadd21d 908 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 3 908 16.919 T 25-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 SMA_RS02220 52d210f8b1cfbe5cded22d339eadd21d 908 ProSitePatterns PS01176 Initiation factor 2 signature. 861 883 - T 25-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 SMA_RS02220 52d210f8b1cfbe5cded22d339eadd21d 908 SUPERFAMILY SSF50447 585 665 7.39E-23 T 25-04-2016 IPR009000 Translation protein, beta-barrel domain SMA_RS02220 52d210f8b1cfbe5cded22d339eadd21d 908 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 330 381 2.4E-14 T 25-04-2016 IPR006847 Translation initiation factor IF-2, N-terminal SMA_RS02220 52d210f8b1cfbe5cded22d339eadd21d 908 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 2 53 1.7E-14 T 25-04-2016 IPR006847 Translation initiation factor IF-2, N-terminal SMA_RS02220 52d210f8b1cfbe5cded22d339eadd21d 908 Pfam PF00009 Elongation factor Tu GTP binding domain 414 571 4.4E-34 T 25-04-2016 SMA_RS02220 52d210f8b1cfbe5cded22d339eadd21d 908 SUPERFAMILY SSF52540 397 583 8.7E-53 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS02220 52d210f8b1cfbe5cded22d339eadd21d 908 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 413 569 3.6E-35 T 25-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 SMA_RS02220 52d210f8b1cfbe5cded22d339eadd21d 908 SUPERFAMILY SSF50447 811 908 5.89E-27 T 25-04-2016 IPR009000 Translation protein, beta-barrel domain SMA_RS02220 52d210f8b1cfbe5cded22d339eadd21d 908 PANTHER PTHR23115 395 730 8.5E-200 T 25-04-2016 SMA_RS02220 52d210f8b1cfbe5cded22d339eadd21d 908 PANTHER PTHR23115 763 906 8.5E-200 T 25-04-2016 SMA_RS02220 52d210f8b1cfbe5cded22d339eadd21d 908 Gene3D G3DSA:3.40.50.300 405 570 1.6E-46 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS02220 52d210f8b1cfbe5cded22d339eadd21d 908 Gene3D G3DSA:2.40.30.10 585 672 2.3E-21 T 25-04-2016 SMA_RS02220 52d210f8b1cfbe5cded22d339eadd21d 908 PANTHER PTHR23115:SF184 395 730 8.5E-200 T 25-04-2016 SMA_RS02220 52d210f8b1cfbe5cded22d339eadd21d 908 PANTHER PTHR23115:SF184 763 906 8.5E-200 T 25-04-2016 SMA_RS02220 52d210f8b1cfbe5cded22d339eadd21d 908 SUPERFAMILY SSF52156 687 817 5.36E-41 T 25-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 SMA_RS02220 52d210f8b1cfbe5cded22d339eadd21d 908 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 323 908 3.1E-247 T 25-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 SMA_RS02625 bb58674fcd908d13d83b677e01890030 258 Gene3D G3DSA:1.10.10.10 104 149 8.2E-5 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMA_RS02625 bb58674fcd908d13d83b677e01890030 258 Pfam PF02631 RecX family 205 255 2.0E-5 T 25-04-2016 IPR003783 Regulatory protein RecX GO:0006282 SMA_RS02625 bb58674fcd908d13d83b677e01890030 258 Pfam PF02631 RecX family 80 198 1.3E-23 T 25-04-2016 IPR003783 Regulatory protein RecX GO:0006282 SMA_RS02625 bb58674fcd908d13d83b677e01890030 258 Hamap MF_01114 Regulatory protein RecX [recX]. 38 203 15.878 T 25-04-2016 IPR003783 Regulatory protein RecX GO:0006282 SMA_RS02625 bb58674fcd908d13d83b677e01890030 258 PANTHER PTHR33602 1 222 2.0E-31 T 25-04-2016 SMA_RS02625 bb58674fcd908d13d83b677e01890030 258 PANTHER PTHR33602:SF1 1 222 2.0E-31 T 25-04-2016 SMA_RS07650 f9d4573e2e5892612947ea3672e5817b 254 SMART SM00382 28 216 4.3E-14 T 25-04-2016 IPR003593 AAA+ ATPase domain SMA_RS07650 f9d4573e2e5892612947ea3672e5817b 254 SUPERFAMILY SSF52540 3 239 1.94E-77 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS07650 f9d4573e2e5892612947ea3672e5817b 254 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SMA_RS07650 f9d4573e2e5892612947ea3672e5817b 254 Pfam PF00005 ABC transporter 19 168 7.5E-37 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMA_RS07650 f9d4573e2e5892612947ea3672e5817b 254 PANTHER PTHR24220:SF474 5 246 1.1E-136 T 25-04-2016 SMA_RS07650 f9d4573e2e5892612947ea3672e5817b 254 PIRSF PIRSF039085 1 245 8.2E-105 T 25-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 SMA_RS07650 f9d4573e2e5892612947ea3672e5817b 254 Gene3D G3DSA:3.40.50.300 3 241 9.9E-80 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS07650 f9d4573e2e5892612947ea3672e5817b 254 PANTHER PTHR24220 5 246 1.1E-136 T 25-04-2016 SMA_RS03250 bf5bcf0fb6327f905fc371540123bdc1 198 Hamap MF_00017 Recombination protein RecR [recR]. 1 198 102.243 T 25-04-2016 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 SMA_RS03250 bf5bcf0fb6327f905fc371540123bdc1 198 PANTHER PTHR30446 1 198 5.7E-111 T 25-04-2016 SMA_RS03250 bf5bcf0fb6327f905fc371540123bdc1 198 SMART SM00493 80 165 9.5E-14 T 25-04-2016 IPR006171 Toprim domain SMA_RS03250 bf5bcf0fb6327f905fc371540123bdc1 198 SUPERFAMILY SSF111304 1 198 3.53E-74 T 25-04-2016 IPR023627 Recombination protein RecR SMA_RS03250 bf5bcf0fb6327f905fc371540123bdc1 198 Pfam PF13662 Toprim domain 80 171 3.2E-23 T 25-04-2016 IPR006171 Toprim domain SMA_RS03250 bf5bcf0fb6327f905fc371540123bdc1 198 PANTHER PTHR30446:SF0 1 198 5.7E-111 T 25-04-2016 SMA_RS03250 bf5bcf0fb6327f905fc371540123bdc1 198 ProSitePatterns PS01300 RecR protein signature. 57 78 - T 25-04-2016 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 SMA_RS03250 bf5bcf0fb6327f905fc371540123bdc1 198 TIGRFAM TIGR00615 recR: recombination protein RecR 2 196 6.2E-85 T 25-04-2016 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 SMA_RS03250 bf5bcf0fb6327f905fc371540123bdc1 198 Pfam PF02132 RecR protein 39 78 2.4E-16 T 25-04-2016 IPR023628 Recombination protein RecR, C4-type zinc finger SMA_RS00650 f6ebd29769e2a320aec56d0e5ff1b71a 148 PANTHER PTHR18964 10 145 1.6E-24 T 25-04-2016 SMA_RS00650 f6ebd29769e2a320aec56d0e5ff1b71a 148 Pfam PF01047 MarR family 35 91 7.6E-12 T 25-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SMA_RS00650 f6ebd29769e2a320aec56d0e5ff1b71a 148 SMART SM00347 22 130 3.2E-13 T 25-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SMA_RS00650 f6ebd29769e2a320aec56d0e5ff1b71a 148 Gene3D G3DSA:1.10.10.10 15 145 9.2E-23 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMA_RS00650 f6ebd29769e2a320aec56d0e5ff1b71a 148 SUPERFAMILY SSF46785 14 146 2.91E-22 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMA_RS00650 f6ebd29769e2a320aec56d0e5ff1b71a 148 PANTHER PTHR18964:SF125 10 145 1.6E-24 T 25-04-2016 SMA_RS03895 0941c61fcf2892eb5a680cc7172533b8 175 SUPERFAMILY SSF109854 2 172 1.06E-12 T 25-04-2016 SMA_RS03895 0941c61fcf2892eb5a680cc7172533b8 175 Gene3D G3DSA:1.20.120.450 2 171 3.6E-55 T 25-04-2016 IPR027369 DinB/YfiT-like putative metal-dependent hydrolase SMA_RS09430 41ab1410b7e6a1366200b5149a52b606 79 SUPERFAMILY SSF47336 5 76 1.96E-13 T 25-04-2016 IPR009081 Phosphopantetheine binding ACP domain SMA_RS09430 41ab1410b7e6a1366200b5149a52b606 79 Gene3D G3DSA:1.10.1200.10 1 76 7.7E-24 T 25-04-2016 IPR009081 Phosphopantetheine binding ACP domain SMA_RS09430 41ab1410b7e6a1366200b5149a52b606 79 Pfam PF00550 Phosphopantetheine attachment site 6 71 9.7E-11 T 25-04-2016 IPR009081 Phosphopantetheine binding ACP domain SMA_RS09430 41ab1410b7e6a1366200b5149a52b606 79 Hamap MF_00565 D-alanine--poly(phosphoribitol) ligase subunit 2 [dltC]. 1 77 48.25 T 25-04-2016 IPR003230 D-alanine--poly(phosphoribitol) ligase subunit 2 GO:0019350|GO:0036370 KEGG: 00473+6.1.1.13|UniPathway: UPA00556 SMA_RS09430 41ab1410b7e6a1366200b5149a52b606 79 TIGRFAM TIGR01688 dltC: D-alanine--poly(phosphoribitol) ligase, subunit 2 4 74 2.9E-22 T 25-04-2016 IPR003230 D-alanine--poly(phosphoribitol) ligase subunit 2 GO:0019350|GO:0036370 KEGG: 00473+6.1.1.13|UniPathway: UPA00556 SMA_RS09430 41ab1410b7e6a1366200b5149a52b606 79 PANTHER PTHR41270 2 77 1.2E-29 T 25-04-2016 SMA_RS09430 41ab1410b7e6a1366200b5149a52b606 79 PANTHER PTHR41270:SF1 2 77 1.2E-29 T 25-04-2016 SMA_RS09620 e9876804c551fa5148fe87733607883e 148 Gene3D G3DSA:1.10.3290.10 19 136 1.6E-19 T 25-04-2016 IPR003812 Fido domain SMA_RS09620 e9876804c551fa5148fe87733607883e 148 SUPERFAMILY SSF140931 64 136 3.27E-6 T 25-04-2016 IPR003812 Fido domain SMA_RS09785 008d9f9ad6a68461c22c0df5b2e53378 151 SMART SM00850 53 150 4.3E-19 T 25-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 SMA_RS09785 008d9f9ad6a68461c22c0df5b2e53378 151 Gene3D G3DSA:2.40.50.40 45 113 3.9E-10 T 25-04-2016 SMA_RS09785 008d9f9ad6a68461c22c0df5b2e53378 151 PANTHER PTHR37299 14 151 2.9E-13 T 25-04-2016 SMA_RS09785 008d9f9ad6a68461c22c0df5b2e53378 151 Pfam PF04397 LytTr DNA-binding domain 55 149 2.2E-17 T 25-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 SMA_RS03440 2640daf25f0e36b7fff140bc744ab9e6 719 TIGRFAM TIGR04170 RNR_1b_NrdE: ribonucleoside-diphosphate reductase, class 1b, alpha subunit 11 719 0.0 T 25-04-2016 IPR026459 Ribonucleotide reductase, class 1b, subunit NrdE KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 SMA_RS03440 2640daf25f0e36b7fff140bc744ab9e6 719 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 94 165 5.4E-11 T 25-04-2016 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 SMA_RS03440 2640daf25f0e36b7fff140bc744ab9e6 719 PANTHER PTHR11573 8 701 1.1E-214 T 25-04-2016 SMA_RS03440 2640daf25f0e36b7fff140bc744ab9e6 719 SUPERFAMILY SSF48168 22 168 9.55E-40 T 25-04-2016 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 SMA_RS03440 2640daf25f0e36b7fff140bc744ab9e6 719 PRINTS PR01183 Ribonucleotide reductase large chain signature 569 596 5.1E-22 T 25-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SMA_RS03440 2640daf25f0e36b7fff140bc744ab9e6 719 PRINTS PR01183 Ribonucleotide reductase large chain signature 376 387 5.1E-22 T 25-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SMA_RS03440 2640daf25f0e36b7fff140bc744ab9e6 719 PRINTS PR01183 Ribonucleotide reductase large chain signature 487 510 5.1E-22 T 25-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SMA_RS03440 2640daf25f0e36b7fff140bc744ab9e6 719 PRINTS PR01183 Ribonucleotide reductase large chain signature 459 481 5.1E-22 T 25-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SMA_RS03440 2640daf25f0e36b7fff140bc744ab9e6 719 PRINTS PR01183 Ribonucleotide reductase large chain signature 245 264 5.1E-22 T 25-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SMA_RS03440 2640daf25f0e36b7fff140bc744ab9e6 719 SUPERFAMILY SSF51998 169 701 8.85E-169 T 25-04-2016 SMA_RS03440 2640daf25f0e36b7fff140bc744ab9e6 719 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 558 580 - T 25-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SMA_RS03440 2640daf25f0e36b7fff140bc744ab9e6 719 Pfam PF08343 Ribonucleotide reductase N-terminal 11 91 3.1E-27 T 25-04-2016 IPR013554 Ribonucleotide reductase N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 SMA_RS03440 2640daf25f0e36b7fff140bc744ab9e6 719 Gene3D G3DSA:3.20.70.20 344 507 8.5E-53 T 25-04-2016 SMA_RS03440 2640daf25f0e36b7fff140bc744ab9e6 719 Gene3D G3DSA:3.20.70.20 80 291 8.5E-53 T 25-04-2016 SMA_RS03440 2640daf25f0e36b7fff140bc744ab9e6 719 Gene3D G3DSA:3.20.70.20 569 671 8.5E-53 T 25-04-2016 SMA_RS03440 2640daf25f0e36b7fff140bc744ab9e6 719 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 96 701 3.6E-146 T 25-04-2016 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 SMA_RS03440 2640daf25f0e36b7fff140bc744ab9e6 719 Pfam PF02867 Ribonucleotide reductase, barrel domain 170 698 9.5E-135 T 25-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SMA_RS05900 4e30b10b4e6984d8b34a18ae393d8dfb 292 Gene3D G3DSA:3.40.190.10 243 286 1.1E-25 T 25-04-2016 SMA_RS05900 4e30b10b4e6984d8b34a18ae393d8dfb 292 Gene3D G3DSA:3.40.190.10 46 124 1.1E-25 T 25-04-2016 SMA_RS05900 4e30b10b4e6984d8b34a18ae393d8dfb 292 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 47 284 4.4E-36 T 25-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SMA_RS05900 4e30b10b4e6984d8b34a18ae393d8dfb 292 Gene3D G3DSA:3.40.190.10 125 224 4.2E-6 T 25-04-2016 SMA_RS05900 4e30b10b4e6984d8b34a18ae393d8dfb 292 SMART SM00062 46 285 6.0E-27 T 25-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SMA_RS05900 4e30b10b4e6984d8b34a18ae393d8dfb 292 SUPERFAMILY SSF53850 46 286 1.69E-36 T 25-04-2016 SMA_RS09935 5e6da36287a047d66b44ed2c68fa34ba 449 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 203 216 - T 25-04-2016 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 SMA_RS09935 5e6da36287a047d66b44ed2c68fa34ba 449 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 409 426 - T 25-04-2016 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 SMA_RS09935 5e6da36287a047d66b44ed2c68fa34ba 449 PRINTS PR00662 Glucose-6-phosphate isomerase signature 377 395 4.2E-24 T 25-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 SMA_RS09935 5e6da36287a047d66b44ed2c68fa34ba 449 PRINTS PR00662 Glucose-6-phosphate isomerase signature 77 96 4.2E-24 T 25-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 SMA_RS09935 5e6da36287a047d66b44ed2c68fa34ba 449 PRINTS PR00662 Glucose-6-phosphate isomerase signature 274 295 4.2E-24 T 25-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 SMA_RS09935 5e6da36287a047d66b44ed2c68fa34ba 449 PRINTS PR00662 Glucose-6-phosphate isomerase signature 199 217 4.2E-24 T 25-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 SMA_RS09935 5e6da36287a047d66b44ed2c68fa34ba 449 PRINTS PR00662 Glucose-6-phosphate isomerase signature 409 422 4.2E-24 T 25-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 SMA_RS09935 5e6da36287a047d66b44ed2c68fa34ba 449 PRINTS PR00662 Glucose-6-phosphate isomerase signature 395 409 4.2E-24 T 25-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 SMA_RS09935 5e6da36287a047d66b44ed2c68fa34ba 449 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 1 436 24.296 T 25-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 SMA_RS09935 5e6da36287a047d66b44ed2c68fa34ba 449 Gene3D G3DSA:3.40.50.10490 201 418 9.5E-91 T 25-04-2016 SMA_RS09935 5e6da36287a047d66b44ed2c68fa34ba 449 SUPERFAMILY SSF53697 5 448 3.06E-136 T 25-04-2016 SMA_RS09935 5e6da36287a047d66b44ed2c68fa34ba 449 Pfam PF00342 Phosphoglucose isomerase 77 426 1.9E-21 T 25-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 SMA_RS09935 5e6da36287a047d66b44ed2c68fa34ba 449 Gene3D G3DSA:3.40.50.10490 69 200 1.4E-27 T 25-04-2016 SMA_RS09935 5e6da36287a047d66b44ed2c68fa34ba 449 PANTHER PTHR11469 57 447 2.9E-149 T 25-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 SMA_RS03080 74dc3a07a92c717b3c6b1ba40c1da689 761 SMART SM01086 655 743 1.2E-29 T 25-04-2016 IPR019489 Clp ATPase, C-terminal SMA_RS03080 74dc3a07a92c717b3c6b1ba40c1da689 761 Gene3D G3DSA:3.40.50.300 120 299 1.3E-44 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS03080 74dc3a07a92c717b3c6b1ba40c1da689 761 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 534 552 1.9E-37 T 25-04-2016 IPR001270 ClpA/B family GO:0005524 SMA_RS03080 74dc3a07a92c717b3c6b1ba40c1da689 761 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 489 507 1.9E-37 T 25-04-2016 IPR001270 ClpA/B family GO:0005524 SMA_RS03080 74dc3a07a92c717b3c6b1ba40c1da689 761 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 596 610 1.9E-37 T 25-04-2016 IPR001270 ClpA/B family GO:0005524 SMA_RS03080 74dc3a07a92c717b3c6b1ba40c1da689 761 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 563 581 1.9E-37 T 25-04-2016 IPR001270 ClpA/B family GO:0005524 SMA_RS03080 74dc3a07a92c717b3c6b1ba40c1da689 761 PANTHER PTHR11638 114 761 0.0 T 25-04-2016 SMA_RS03080 74dc3a07a92c717b3c6b1ba40c1da689 761 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 252 264 - T 25-04-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 SMA_RS03080 74dc3a07a92c717b3c6b1ba40c1da689 761 SUPERFAMILY SSF52540 118 370 7.78E-68 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS03080 74dc3a07a92c717b3c6b1ba40c1da689 761 SMART SM00382 156 296 4.1E-10 T 25-04-2016 IPR003593 AAA+ ATPase domain SMA_RS03080 74dc3a07a92c717b3c6b1ba40c1da689 761 SMART SM00382 485 656 1.1E-12 T 25-04-2016 IPR003593 AAA+ ATPase domain SMA_RS03080 74dc3a07a92c717b3c6b1ba40c1da689 761 Gene3D G3DSA:3.40.50.300 440 665 3.1E-57 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS03080 74dc3a07a92c717b3c6b1ba40c1da689 761 Gene3D G3DSA:1.10.8.60 666 748 3.8E-27 T 25-04-2016 SMA_RS03080 74dc3a07a92c717b3c6b1ba40c1da689 761 PANTHER PTHR11638:SF117 114 761 0.0 T 25-04-2016 SMA_RS03080 74dc3a07a92c717b3c6b1ba40c1da689 761 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 519 537 - T 25-04-2016 IPR028299 ClpA/B, conserved site 2 SMA_RS03080 74dc3a07a92c717b3c6b1ba40c1da689 761 Gene3D G3DSA:1.10.8.60 300 375 6.6E-32 T 25-04-2016 SMA_RS03080 74dc3a07a92c717b3c6b1ba40c1da689 761 SUPERFAMILY SSF52540 434 738 8.17E-77 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS03080 74dc3a07a92c717b3c6b1ba40c1da689 761 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 655 729 7.3E-24 T 25-04-2016 IPR019489 Clp ATPase, C-terminal SMA_RS03080 74dc3a07a92c717b3c6b1ba40c1da689 761 Gene3D G3DSA:4.10.860.10 376 409 3.4E-4 T 25-04-2016 IPR001943 UVR domain GO:0005515 SMA_RS03080 74dc3a07a92c717b3c6b1ba40c1da689 761 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 161 289 5.2E-14 T 25-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 SMA_RS03080 74dc3a07a92c717b3c6b1ba40c1da689 761 Pfam PF07724 AAA domain (Cdc48 subfamily) 484 647 4.4E-49 T 25-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 SMA_RS03080 74dc3a07a92c717b3c6b1ba40c1da689 761 Pfam PF02151 UvrB/uvrC motif 371 405 6.4E-8 T 25-04-2016 IPR001943 UVR domain GO:0005515 SMA_RS06030 c6bb5b823de89ebf3949d53a616a333b 450 Gene3D G3DSA:3.40.192.10 69 189 4.7E-64 T 25-04-2016 SMA_RS06030 c6bb5b823de89ebf3949d53a616a333b 450 Gene3D G3DSA:1.10.285.10 6 68 5.0E-30 T 25-04-2016 SMA_RS06030 c6bb5b823de89ebf3949d53a616a333b 450 Gene3D G3DSA:1.10.285.10 375 450 7.3E-27 T 25-04-2016 SMA_RS06030 c6bb5b823de89ebf3949d53a616a333b 450 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 203 448 2.6E-85 T 25-04-2016 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 SMA_RS06030 c6bb5b823de89ebf3949d53a616a333b 450 SUPERFAMILY SSF51735 203 449 1.22E-72 T 25-04-2016 IPR016040 NAD(P)-binding domain SMA_RS06030 c6bb5b823de89ebf3949d53a616a333b 450 SMART SM00839 205 448 6.2E-87 T 25-04-2016 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 SMA_RS06030 c6bb5b823de89ebf3949d53a616a333b 450 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 374 385 1.598269E-29 T 25-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 SMA_RS06030 c6bb5b823de89ebf3949d53a616a333b 450 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 115 129 1.598269E-29 T 25-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 SMA_RS06030 c6bb5b823de89ebf3949d53a616a333b 450 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 194 216 1.598269E-29 T 25-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 SMA_RS06030 c6bb5b823de89ebf3949d53a616a333b 450 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 236 256 1.598269E-29 T 25-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 SMA_RS06030 c6bb5b823de89ebf3949d53a616a333b 450 PANTHER PTHR11606 6 450 5.1E-250 T 25-04-2016 SMA_RS06030 c6bb5b823de89ebf3949d53a616a333b 450 PIRSF PIRSF000185 23 450 2.1E-118 T 25-04-2016 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 SMA_RS06030 c6bb5b823de89ebf3949d53a616a333b 450 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 58 186 2.6E-51 T 25-04-2016 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 SMA_RS06030 c6bb5b823de89ebf3949d53a616a333b 450 Gene3D G3DSA:3.40.50.720 210 374 6.5E-58 T 25-04-2016 IPR016040 NAD(P)-binding domain SMA_RS06030 c6bb5b823de89ebf3949d53a616a333b 450 PANTHER PTHR11606:SF4 6 450 5.1E-250 T 25-04-2016 SMA_RS06030 c6bb5b823de89ebf3949d53a616a333b 450 SUPERFAMILY SSF53223 8 197 7.68E-75 T 25-04-2016 SMA_RS10490 ad36b0922edb4607d1c82da75c20615a 340 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 3 338 35.108 T 25-04-2016 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2 SMA_RS10490 ad36b0922edb4607d1c82da75c20615a 340 Pfam PF00579 tRNA synthetases class I (W and Y) 5 290 5.9E-56 T 25-04-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SMA_RS10490 ad36b0922edb4607d1c82da75c20615a 340 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 3 337 1.9E-76 T 25-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 SMA_RS10490 ad36b0922edb4607d1c82da75c20615a 340 Gene3D G3DSA:3.40.50.620 3 217 3.3E-76 T 25-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SMA_RS10490 ad36b0922edb4607d1c82da75c20615a 340 Gene3D G3DSA:1.10.240.10 218 327 6.8E-36 T 25-04-2016 SMA_RS10490 ad36b0922edb4607d1c82da75c20615a 340 SUPERFAMILY SSF52374 5 337 6.76E-80 T 25-04-2016 SMA_RS10490 ad36b0922edb4607d1c82da75c20615a 340 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 12 21 - T 25-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SMA_RS10490 ad36b0922edb4607d1c82da75c20615a 340 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 16 32 3.9E-24 T 25-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 SMA_RS10490 ad36b0922edb4607d1c82da75c20615a 340 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 202 212 3.9E-24 T 25-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 SMA_RS10490 ad36b0922edb4607d1c82da75c20615a 340 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 69 88 3.9E-24 T 25-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 SMA_RS10490 ad36b0922edb4607d1c82da75c20615a 340 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 147 168 3.9E-24 T 25-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 SMA_RS10490 ad36b0922edb4607d1c82da75c20615a 340 PANTHER PTHR10055 3 339 1.9E-183 T 25-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 SMA_RS10490 ad36b0922edb4607d1c82da75c20615a 340 PANTHER PTHR10055:SF6 3 339 1.9E-183 T 25-04-2016 SMA_RS07040 cb2680bf290d64651330a2851e34cfe6 611 Gene3D G3DSA:3.30.70.240 410 499 4.2E-25 T 25-04-2016 IPR000640 Translation elongation factor EFG, V domain SMA_RS07040 cb2680bf290d64651330a2851e34cfe6 611 Pfam PF00679 Elongation factor G C-terminus 408 495 2.7E-25 T 25-04-2016 IPR000640 Translation elongation factor EFG, V domain SMA_RS07040 cb2680bf290d64651330a2851e34cfe6 611 TIGRFAM TIGR01393 lepA: elongation factor 4 12 605 0.0 T 25-04-2016 IPR006297 Elongation factor 4 GO:0005525 SMA_RS07040 cb2680bf290d64651330a2851e34cfe6 611 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 25-04-2016 IPR031157 Tr-type G domain, conserved site SMA_RS07040 cb2680bf290d64651330a2851e34cfe6 611 PRINTS PR00315 GTP-binding elongation factor signature 99 110 3.9E-14 T 25-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SMA_RS07040 cb2680bf290d64651330a2851e34cfe6 611 PRINTS PR00315 GTP-binding elongation factor signature 58 66 3.9E-14 T 25-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SMA_RS07040 cb2680bf290d64651330a2851e34cfe6 611 PRINTS PR00315 GTP-binding elongation factor signature 83 93 3.9E-14 T 25-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SMA_RS07040 cb2680bf290d64651330a2851e34cfe6 611 PRINTS PR00315 GTP-binding elongation factor signature 135 144 3.9E-14 T 25-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SMA_RS07040 cb2680bf290d64651330a2851e34cfe6 611 PRINTS PR00315 GTP-binding elongation factor signature 15 28 3.9E-14 T 25-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SMA_RS07040 cb2680bf290d64651330a2851e34cfe6 611 Gene3D G3DSA:3.40.50.300 6 201 2.1E-61 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS07040 cb2680bf290d64651330a2851e34cfe6 611 SUPERFAMILY SSF54980 301 379 1.12E-19 T 25-04-2016 IPR009022 Elongation factor G, III-V domain SMA_RS07040 cb2680bf290d64651330a2851e34cfe6 611 Gene3D G3DSA:2.40.30.10 202 298 1.1E-23 T 25-04-2016 SMA_RS07040 cb2680bf290d64651330a2851e34cfe6 611 Pfam PF06421 GTP-binding protein LepA C-terminus 497 603 3.3E-50 T 25-04-2016 IPR013842 GTP-binding protein LepA, C-terminal SMA_RS07040 cb2680bf290d64651330a2851e34cfe6 611 Pfam PF00009 Elongation factor Tu GTP binding domain 12 190 3.1E-53 T 25-04-2016 SMA_RS07040 cb2680bf290d64651330a2851e34cfe6 611 SUPERFAMILY SSF54980 408 503 1.01E-26 T 25-04-2016 IPR009022 Elongation factor G, III-V domain SMA_RS07040 cb2680bf290d64651330a2851e34cfe6 611 PANTHER PTHR23115:SF175 406 605 1.6E-289 T 25-04-2016 SMA_RS07040 cb2680bf290d64651330a2851e34cfe6 611 PANTHER PTHR23115:SF175 1 382 1.6E-289 T 25-04-2016 SMA_RS07040 cb2680bf290d64651330a2851e34cfe6 611 Hamap MF_00071 Elongation factor 4 [lepA]. 1 607 308.451 T 25-04-2016 IPR006297 Elongation factor 4 GO:0005525 SMA_RS07040 cb2680bf290d64651330a2851e34cfe6 611 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 12 183 4.5E-19 T 25-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 SMA_RS07040 cb2680bf290d64651330a2851e34cfe6 611 Pfam PF03144 Elongation factor Tu domain 2 214 284 1.1E-7 T 25-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 SMA_RS07040 cb2680bf290d64651330a2851e34cfe6 611 SUPERFAMILY SSF52540 5 232 2.02E-55 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS07040 cb2680bf290d64651330a2851e34cfe6 611 PANTHER PTHR23115 406 605 1.6E-289 T 25-04-2016 SMA_RS07040 cb2680bf290d64651330a2851e34cfe6 611 PANTHER PTHR23115 1 382 1.6E-289 T 25-04-2016 SMA_RS07040 cb2680bf290d64651330a2851e34cfe6 611 Gene3D G3DSA:3.30.70.870 301 378 9.3E-28 T 25-04-2016 SMA_RS07040 cb2680bf290d64651330a2851e34cfe6 611 SMART SM00838 407 495 4.4E-5 T 25-04-2016 IPR000640 Translation elongation factor EFG, V domain SMA_RS07190 3418482b318a8a658228ba1474be8ca6 202 SMART SM01211 12 196 0.0063 T 25-04-2016 SMA_RS07190 3418482b318a8a658228ba1474be8ca6 202 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 2 198 2.8E-64 T 25-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 SMA_RS07190 3418482b318a8a658228ba1474be8ca6 202 Gene3D G3DSA:3.40.50.880 1 201 1.0E-71 T 25-04-2016 IPR029062 Class I glutamine amidotransferase-like SMA_RS07190 3418482b318a8a658228ba1474be8ca6 202 PANTHER PTHR21235 2 197 3.5E-80 T 25-04-2016 SMA_RS07190 3418482b318a8a658228ba1474be8ca6 202 PIRSF PIRSF000495 1 202 4.4E-68 T 25-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 SMA_RS07190 3418482b318a8a658228ba1474be8ca6 202 Pfam PF00117 Glutamine amidotransferase class-I 4 187 2.8E-23 T 25-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 SMA_RS07190 3418482b318a8a658228ba1474be8ca6 202 PANTHER PTHR21235:SF1 2 197 3.5E-80 T 25-04-2016 SMA_RS07190 3418482b318a8a658228ba1474be8ca6 202 SUPERFAMILY SSF52317 2 197 3.01E-53 T 25-04-2016 IPR029062 Class I glutamine amidotransferase-like SMA_RS07190 3418482b318a8a658228ba1474be8ca6 202 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 1 199 34.023 T 25-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 SMA_RS05800 9357331948cb10767b3b1e8c00054ea0 315 PANTHER PTHR21091:SF123 8 315 6.1E-90 T 25-04-2016 SMA_RS05800 9357331948cb10767b3b1e8c00054ea0 315 SUPERFAMILY SSF82282 2 314 7.85E-83 T 25-04-2016 IPR003726 Homocysteine-binding domain SMA_RS05800 9357331948cb10767b3b1e8c00054ea0 315 Pfam PF02574 Homocysteine S-methyltransferase 14 312 2.2E-71 T 25-04-2016 IPR003726 Homocysteine-binding domain SMA_RS05800 9357331948cb10767b3b1e8c00054ea0 315 Gene3D G3DSA:3.20.20.330 3 314 3.6E-93 T 25-04-2016 IPR003726 Homocysteine-binding domain SMA_RS05800 9357331948cb10767b3b1e8c00054ea0 315 PANTHER PTHR21091 8 315 6.1E-90 T 25-04-2016 SMA_RS08640 ecc576171ebdaf6a5ca22f13ef920c68 372 SUPERFAMILY SSF52540 65 281 1.06E-31 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS08640 ecc576171ebdaf6a5ca22f13ef920c68 372 Pfam PF01926 50S ribosome-binding GTPase 166 235 6.8E-14 T 25-04-2016 IPR006073 GTP binding domain GO:0005525 SMA_RS08640 ecc576171ebdaf6a5ca22f13ef920c68 372 PANTHER PTHR11089 1 372 4.1E-203 T 25-04-2016 SMA_RS08640 ecc576171ebdaf6a5ca22f13ef920c68 372 PANTHER PTHR11089:SF34 1 372 4.1E-203 T 25-04-2016 SMA_RS08640 ecc576171ebdaf6a5ca22f13ef920c68 372 TIGRFAM TIGR03597 GTPase_YqeH: ribosome biogenesis GTPase YqeH 6 372 2.5E-154 T 25-04-2016 IPR019988 GTP-binding protein, riobosome biogenesis, YqeH SMA_RS08640 ecc576171ebdaf6a5ca22f13ef920c68 372 Gene3D G3DSA:3.40.50.300 74 225 1.1E-29 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS05205 ce45d8a3dcf8a23fad65c7a172eab22a 322 Pfam PF06207 Protein of unknown function (DUF1002) 45 273 8.4E-59 T 25-04-2016 IPR009343 Protein of unknown function DUF1002 SMA_RS01735 2977c07c08a95e54c8a8eb3a5f529f91 79 Gene3D G3DSA:1.10.1660.10 5 59 1.2E-13 T 25-04-2016 SMA_RS01735 2977c07c08a95e54c8a8eb3a5f529f91 79 Pfam PF09278 MerR, DNA binding 5 59 2.3E-12 T 25-04-2016 IPR015358 Transcription regulator MerR, DNA binding SMA_RS01735 2977c07c08a95e54c8a8eb3a5f529f91 79 SUPERFAMILY SSF46955 5 59 1.24E-11 T 25-04-2016 IPR009061 Putative DNA-binding domain SMA_RS01360 90adcbe2674f4cd8bf3ac36cc539bd15 150 Pfam PF01047 MarR family 35 92 7.7E-15 T 25-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SMA_RS01360 90adcbe2674f4cd8bf3ac36cc539bd15 150 PANTHER PTHR33164:SF4 3 137 1.6E-28 T 25-04-2016 SMA_RS01360 90adcbe2674f4cd8bf3ac36cc539bd15 150 SMART SM00347 28 128 1.2E-24 T 25-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SMA_RS01360 90adcbe2674f4cd8bf3ac36cc539bd15 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 88 104 1.5E-10 T 25-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SMA_RS01360 90adcbe2674f4cd8bf3ac36cc539bd15 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 118 138 1.5E-10 T 25-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SMA_RS01360 90adcbe2674f4cd8bf3ac36cc539bd15 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 69 84 1.5E-10 T 25-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SMA_RS01360 90adcbe2674f4cd8bf3ac36cc539bd15 150 Gene3D G3DSA:1.10.10.10 12 138 1.0E-35 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMA_RS01360 90adcbe2674f4cd8bf3ac36cc539bd15 150 SUPERFAMILY SSF46785 12 139 1.14E-31 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMA_RS01360 90adcbe2674f4cd8bf3ac36cc539bd15 150 PANTHER PTHR33164 3 137 1.6E-28 T 25-04-2016 SMA_RS06245 b1f4cad25af95fd16216b4ee433b1213 305 PANTHER PTHR30346 1 293 3.8E-46 T 25-04-2016 SMA_RS06245 b1f4cad25af95fd16216b4ee433b1213 305 Gene3D G3DSA:3.40.190.10 98 203 1.6E-10 T 25-04-2016 SMA_RS06245 b1f4cad25af95fd16216b4ee433b1213 305 SUPERFAMILY SSF46785 1 84 1.02E-19 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMA_RS06245 b1f4cad25af95fd16216b4ee433b1213 305 PANTHER PTHR30346:SF0 1 293 3.8E-46 T 25-04-2016 SMA_RS06245 b1f4cad25af95fd16216b4ee433b1213 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 2.2E-18 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMA_RS06245 b1f4cad25af95fd16216b4ee433b1213 305 SUPERFAMILY SSF53850 98 299 1.16E-16 T 25-04-2016 SMA_RS06245 b1f4cad25af95fd16216b4ee433b1213 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 9.2E-8 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMA_RS06245 b1f4cad25af95fd16216b4ee433b1213 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 9.2E-8 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMA_RS06245 b1f4cad25af95fd16216b4ee433b1213 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 9.2E-8 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMA_RS06245 b1f4cad25af95fd16216b4ee433b1213 305 Pfam PF03466 LysR substrate binding domain 99 296 1.3E-12 T 25-04-2016 IPR005119 LysR, substrate-binding SMA_RS06245 b1f4cad25af95fd16216b4ee433b1213 305 Gene3D G3DSA:1.10.10.10 1 85 1.4E-24 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMA_RS05695 0adbeed2d0be561110edea4d361728dc 298 SUPERFAMILY SSF74650 2 296 1.32E-44 T 25-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 SMA_RS05695 0adbeed2d0be561110edea4d361728dc 298 PANTHER PTHR11122 201 297 8.8E-38 T 25-04-2016 SMA_RS05695 0adbeed2d0be561110edea4d361728dc 298 PANTHER PTHR11122 74 169 8.8E-38 T 25-04-2016 SMA_RS05695 0adbeed2d0be561110edea4d361728dc 298 PANTHER PTHR11122 1 58 8.8E-38 T 25-04-2016 SMA_RS05695 0adbeed2d0be561110edea4d361728dc 298 PANTHER PTHR11122:SF14 201 297 8.8E-38 T 25-04-2016 SMA_RS05695 0adbeed2d0be561110edea4d361728dc 298 PANTHER PTHR11122:SF14 74 169 8.8E-38 T 25-04-2016 SMA_RS05695 0adbeed2d0be561110edea4d361728dc 298 PANTHER PTHR11122:SF14 1 58 8.8E-38 T 25-04-2016 SMA_RS05695 0adbeed2d0be561110edea4d361728dc 298 Gene3D G3DSA:2.70.98.10 2 263 2.0E-15 T 25-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 SMA_RS05695 0adbeed2d0be561110edea4d361728dc 298 Pfam PF01263 Aldose 1-epimerase 2 265 1.7E-32 T 25-04-2016 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 SMA_RS04225 fb05946309f18139682ffb90a4a4a617 230 TIGRFAM TIGR02254 YjjG/YfnB: noncanonical pyrimidine nucleotidase, YjjG family 5 227 2.1E-60 T 25-04-2016 IPR011951 HAD-superfamily hydrolase, subfamily IA, YjjG/YfnB GO:0016787 SMA_RS04225 fb05946309f18139682ffb90a4a4a617 230 Pfam PF13419 Haloacid dehalogenase-like hydrolase 8 201 8.4E-23 T 25-04-2016 IPR023214 HAD-like domain SMA_RS04225 fb05946309f18139682ffb90a4a4a617 230 PANTHER PTHR12725 8 230 7.7E-35 T 25-04-2016 SMA_RS04225 fb05946309f18139682ffb90a4a4a617 230 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 113 126 2.4E-5 T 25-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SMA_RS04225 fb05946309f18139682ffb90a4a4a617 230 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 144 160 2.4E-5 T 25-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SMA_RS04225 fb05946309f18139682ffb90a4a4a617 230 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 191 204 2.4E-5 T 25-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SMA_RS04225 fb05946309f18139682ffb90a4a4a617 230 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 5 16 2.4E-5 T 25-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SMA_RS04225 fb05946309f18139682ffb90a4a4a617 230 Gene3D G3DSA:1.10.150.240 18 93 3.2E-27 T 25-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 SMA_RS04225 fb05946309f18139682ffb90a4a4a617 230 Gene3D G3DSA:3.40.50.1000 94 229 8.8E-40 T 25-04-2016 IPR023214 HAD-like domain SMA_RS04225 fb05946309f18139682ffb90a4a4a617 230 SUPERFAMILY SSF56784 5 229 8.27E-42 T 25-04-2016 IPR023214 HAD-like domain SMA_RS04225 fb05946309f18139682ffb90a4a4a617 230 PANTHER PTHR12725:SF57 8 230 7.7E-35 T 25-04-2016 SMA_RS04225 fb05946309f18139682ffb90a4a4a617 230 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 92 196 1.4E-10 T 25-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SMA_RS00445 8bdf54406f68c85cfd9b375a0105d6e0 213 Gene3D G3DSA:3.40.50.300 1 209 3.9E-69 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS00445 8bdf54406f68c85cfd9b375a0105d6e0 213 Pfam PF00406 Adenylate kinase 5 187 2.0E-56 T 25-04-2016 SMA_RS00445 8bdf54406f68c85cfd9b375a0105d6e0 213 TIGRFAM TIGR01351 adk: adenylate kinase 2 209 6.5E-73 T 25-04-2016 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 SMA_RS00445 8bdf54406f68c85cfd9b375a0105d6e0 213 SUPERFAMILY SSF52540 159 211 9.16E-39 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS00445 8bdf54406f68c85cfd9b375a0105d6e0 213 SUPERFAMILY SSF52540 1 128 9.16E-39 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS00445 8bdf54406f68c85cfd9b375a0105d6e0 213 ProSitePatterns PS00113 Adenylate kinase signature. 82 93 - T 25-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 SMA_RS00445 8bdf54406f68c85cfd9b375a0105d6e0 213 Hamap MF_00235 Adenylate kinase [adk]. 1 210 48.538 T 25-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 SMA_RS00445 8bdf54406f68c85cfd9b375a0105d6e0 213 PANTHER PTHR23359 1 212 3.1E-85 T 25-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 SMA_RS00445 8bdf54406f68c85cfd9b375a0105d6e0 213 PRINTS PR00094 Adenylate kinase signature 32 46 6.5E-31 T 25-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 SMA_RS00445 8bdf54406f68c85cfd9b375a0105d6e0 213 PRINTS PR00094 Adenylate kinase signature 4 17 6.5E-31 T 25-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 SMA_RS00445 8bdf54406f68c85cfd9b375a0105d6e0 213 PRINTS PR00094 Adenylate kinase signature 157 172 6.5E-31 T 25-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 SMA_RS00445 8bdf54406f68c85cfd9b375a0105d6e0 213 PRINTS PR00094 Adenylate kinase signature 82 98 6.5E-31 T 25-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 SMA_RS00445 8bdf54406f68c85cfd9b375a0105d6e0 213 PRINTS PR00094 Adenylate kinase signature 174 188 6.5E-31 T 25-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 SMA_RS09810 29354d0daf350f1d73cac7a59f7ab083 119 PANTHER PTHR33992 1 117 2.1E-32 T 25-04-2016 SMA_RS09810 29354d0daf350f1d73cac7a59f7ab083 119 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 8 100 4.0E-36 T 25-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 SMA_RS09810 29354d0daf350f1d73cac7a59f7ab083 119 Gene3D G3DSA:3.30.230.10 1 111 7.4E-38 T 25-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SMA_RS09810 29354d0daf350f1d73cac7a59f7ab083 119 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 2 105 5.7E-30 T 25-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 SMA_RS09810 29354d0daf350f1d73cac7a59f7ab083 119 SUPERFAMILY SSF54211 1 111 9.86E-33 T 25-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SMA_RS09810 29354d0daf350f1d73cac7a59f7ab083 119 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 1 109 18.22 T 25-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 SMA_RS09810 29354d0daf350f1d73cac7a59f7ab083 119 Pfam PF00825 Ribonuclease P 1 104 1.5E-31 T 25-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 SMA_RS01605 95e14a23a1986c224aa1f591fb10e529 179 Hamap MF_01151 Protein GrpE [grpE]. 3 179 19.056 T 25-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 SMA_RS01605 95e14a23a1986c224aa1f591fb10e529 179 Pfam PF01025 GrpE 20 178 6.8E-45 T 25-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 SMA_RS01605 95e14a23a1986c224aa1f591fb10e529 179 SUPERFAMILY SSF58014 33 124 1.44E-21 T 25-04-2016 SMA_RS01605 95e14a23a1986c224aa1f591fb10e529 179 SUPERFAMILY SSF51064 131 178 3.4E-14 T 25-04-2016 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 SMA_RS01605 95e14a23a1986c224aa1f591fb10e529 179 PANTHER PTHR21237 21 177 3.2E-45 T 25-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 SMA_RS01605 95e14a23a1986c224aa1f591fb10e529 179 Gene3D G3DSA:2.30.22.10 129 178 4.6E-21 T 25-04-2016 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 SMA_RS01605 95e14a23a1986c224aa1f591fb10e529 179 Gene3D G3DSA:3.90.20.20 28 121 1.9E-23 T 25-04-2016 IPR013805 GrpE nucleotide exchange factor, coiled-coil SMA_RS01605 95e14a23a1986c224aa1f591fb10e529 179 ProSitePatterns PS01071 grpE protein signature. 133 177 - T 25-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 SMA_RS01605 95e14a23a1986c224aa1f591fb10e529 179 PRINTS PR00773 GrpE protein signature 158 177 5.7E-26 T 25-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 SMA_RS01605 95e14a23a1986c224aa1f591fb10e529 179 PRINTS PR00773 GrpE protein signature 130 145 5.7E-26 T 25-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 SMA_RS01605 95e14a23a1986c224aa1f591fb10e529 179 PRINTS PR00773 GrpE protein signature 53 69 5.7E-26 T 25-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 SMA_RS01605 95e14a23a1986c224aa1f591fb10e529 179 PRINTS PR00773 GrpE protein signature 81 96 5.7E-26 T 25-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 SMA_RS06690 7adf6bc7cdb98813f29d9e65f0002b9d 134 Pfam PF13276 HTH-like domain 32 87 2.4E-14 T 25-04-2016 IPR025948 HTH-like domain SMA_RS06690 7adf6bc7cdb98813f29d9e65f0002b9d 134 PANTHER PTHR32552 1 125 2.5E-15 T 25-04-2016 SMA_RS09505 da19d38062320619cb82cd238716e557 68 Gene3D G3DSA:3.30.70.100 2 65 5.1E-16 T 25-04-2016 SMA_RS09505 da19d38062320619cb82cd238716e557 68 Pfam PF00403 Heavy-metal-associated domain 5 63 1.3E-14 T 25-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 SMA_RS09505 da19d38062320619cb82cd238716e557 68 SUPERFAMILY SSF55008 1 66 1.31E-14 T 25-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 SMA_RS01520 da19d38062320619cb82cd238716e557 68 Gene3D G3DSA:3.30.70.100 2 65 5.1E-16 T 25-04-2016 SMA_RS01520 da19d38062320619cb82cd238716e557 68 Pfam PF00403 Heavy-metal-associated domain 5 63 1.3E-14 T 25-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 SMA_RS01520 da19d38062320619cb82cd238716e557 68 SUPERFAMILY SSF55008 1 66 1.31E-14 T 25-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 SMA_RS07665 9fbebc306f80823b9fc10fb60b214a4c 215 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 31 210 7.0E-21 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SMA_RS07665 9fbebc306f80823b9fc10fb60b214a4c 215 SUPERFAMILY SSF161098 11 202 5.89E-40 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SMA_RS07665 9fbebc306f80823b9fc10fb60b214a4c 215 Gene3D G3DSA:1.10.3720.10 12 212 1.4E-45 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SMA_RS07665 9fbebc306f80823b9fc10fb60b214a4c 215 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 9 101 1.3E-21 T 25-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 SMA_RS07665 9fbebc306f80823b9fc10fb60b214a4c 215 PANTHER PTHR30614 8 215 7.8E-68 T 25-04-2016 SMA_RS07915 c65d43f72a1315e6826933f69e5b0d5e 460 SUPERFAMILY SSF53448 4 252 5.63E-66 T 25-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SMA_RS07915 c65d43f72a1315e6826933f69e5b0d5e 460 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 318 350 1.3E-6 T 25-04-2016 IPR001451 Hexapeptide repeat SMA_RS07915 c65d43f72a1315e6826933f69e5b0d5e 460 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 266 297 5.2E-4 T 25-04-2016 IPR001451 Hexapeptide repeat SMA_RS07915 c65d43f72a1315e6826933f69e5b0d5e 460 SUPERFAMILY SSF51161 256 445 3.21E-46 T 25-04-2016 IPR011004 Trimeric LpxA-like SMA_RS07915 c65d43f72a1315e6826933f69e5b0d5e 460 Gene3D G3DSA:2.160.10.10 324 447 9.8E-35 T 25-04-2016 SMA_RS07915 c65d43f72a1315e6826933f69e5b0d5e 460 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 394 426 4.4E-8 T 25-04-2016 IPR001451 Hexapeptide repeat SMA_RS07915 c65d43f72a1315e6826933f69e5b0d5e 460 PANTHER PTHR22572:SF115 4 448 4.6E-215 T 25-04-2016 SMA_RS07915 c65d43f72a1315e6826933f69e5b0d5e 460 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 5 451 6.5E-174 T 25-04-2016 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00113|UniPathway: UPA00113|UniPathway: UPA00973 SMA_RS07915 c65d43f72a1315e6826933f69e5b0d5e 460 Gene3D G3DSA:2.160.10.10 245 323 1.3E-16 T 25-04-2016 SMA_RS07915 c65d43f72a1315e6826933f69e5b0d5e 460 Gene3D G3DSA:3.90.550.10 1 244 1.3E-80 T 25-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SMA_RS07915 c65d43f72a1315e6826933f69e5b0d5e 460 PANTHER PTHR22572 4 448 4.6E-215 T 25-04-2016 SMA_RS07915 c65d43f72a1315e6826933f69e5b0d5e 460 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 2 451 41.122 T 25-04-2016 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00113|UniPathway: UPA00113|UniPathway: UPA00973 SMA_RS07915 c65d43f72a1315e6826933f69e5b0d5e 460 Pfam PF12804 MobA-like NTP transferase domain 5 141 3.9E-20 T 25-04-2016 IPR025877 MobA-like NTP transferase SMA_RS10135 17d56130ab230a5e0ec2ddf380241571 139 Gene3D G3DSA:3.30.420.140 1 137 7.8E-49 T 25-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 SMA_RS10135 17d56130ab230a5e0ec2ddf380241571 139 Pfam PF03652 Holliday junction resolvase 1 136 2.1E-42 T 25-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 SMA_RS10135 17d56130ab230a5e0ec2ddf380241571 139 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 4 136 4.0E-43 T 25-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 SMA_RS10135 17d56130ab230a5e0ec2ddf380241571 139 PANTHER PTHR33317 1 138 4.0E-44 T 25-04-2016 SMA_RS10135 17d56130ab230a5e0ec2ddf380241571 139 SUPERFAMILY SSF53098 1 137 3.79E-42 T 25-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMA_RS10135 17d56130ab230a5e0ec2ddf380241571 139 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 1 139 26.841 T 25-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 SMA_RS10135 17d56130ab230a5e0ec2ddf380241571 139 SMART SM00732 1 103 3.9E-39 T 25-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 SMA_RS03200 e9cf4d1c264ef3dc4ce0826bd8112231 497 PANTHER PTHR11654:SF119 1 223 2.1E-132 T 25-04-2016 SMA_RS03200 e9cf4d1c264ef3dc4ce0826bd8112231 497 PANTHER PTHR11654:SF119 273 462 2.1E-132 T 25-04-2016 SMA_RS03200 e9cf4d1c264ef3dc4ce0826bd8112231 497 PANTHER PTHR11654 1 223 2.1E-132 T 25-04-2016 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 SMA_RS03200 e9cf4d1c264ef3dc4ce0826bd8112231 497 PANTHER PTHR11654 273 462 2.1E-132 T 25-04-2016 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 SMA_RS03200 e9cf4d1c264ef3dc4ce0826bd8112231 497 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 9 494 3.8E-132 T 25-04-2016 IPR005279 Dipeptide/tripeptide permease GO:0015197|GO:0015833|GO:0016020 SMA_RS03200 e9cf4d1c264ef3dc4ce0826bd8112231 497 Pfam PF00854 POT family 92 466 4.5E-83 T 25-04-2016 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 SMA_RS03200 e9cf4d1c264ef3dc4ce0826bd8112231 497 SUPERFAMILY SSF103473 282 488 2.09E-29 T 25-04-2016 IPR020846 Major facilitator superfamily domain SMA_RS03200 e9cf4d1c264ef3dc4ce0826bd8112231 497 SUPERFAMILY SSF103473 12 208 2.09E-29 T 25-04-2016 IPR020846 Major facilitator superfamily domain SMA_RS03200 e9cf4d1c264ef3dc4ce0826bd8112231 497 ProSitePatterns PS01023 PTR2 family proton/oligopeptide symporters signature 2. 154 166 - T 25-04-2016 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 SMA_RS03200 e9cf4d1c264ef3dc4ce0826bd8112231 497 Gene3D G3DSA:1.20.1250.20 293 488 1.1E-4 T 25-04-2016 SMA_RS03200 e9cf4d1c264ef3dc4ce0826bd8112231 497 Gene3D G3DSA:1.20.1250.20 30 203 6.9E-15 T 25-04-2016 SMA_RS06210 6af5ff5c4ae507e224a6bd32a6ef028e 1059 SUPERFAMILY SSF52440 549 668 4.17E-46 T 25-04-2016 IPR016185 Pre-ATP-grasp domain SMA_RS06210 6af5ff5c4ae507e224a6bd32a6ef028e 1059 Gene3D G3DSA:3.30.470.20 200 398 2.0E-72 T 25-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 SMA_RS06210 6af5ff5c4ae507e224a6bd32a6ef028e 1059 Gene3D G3DSA:3.30.470.20 738 927 6.9E-75 T 25-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 SMA_RS06210 6af5ff5c4ae507e224a6bd32a6ef028e 1059 SUPERFAMILY SSF56059 666 927 5.3E-104 T 25-04-2016 SMA_RS06210 6af5ff5c4ae507e224a6bd32a6ef028e 1059 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1058 13.138 T 25-04-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SMA_RS06210 6af5ff5c4ae507e224a6bd32a6ef028e 1059 SUPERFAMILY SSF52335 929 1049 1.31E-27 T 25-04-2016 IPR011607 Methylglyoxal synthase-like domain SMA_RS06210 6af5ff5c4ae507e224a6bd32a6ef028e 1059 SUPERFAMILY SSF56059 128 399 8.31E-106 T 25-04-2016 SMA_RS06210 6af5ff5c4ae507e224a6bd32a6ef028e 1059 SUPERFAMILY SSF48108 395 547 3.92E-51 T 25-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SMA_RS06210 6af5ff5c4ae507e224a6bd32a6ef028e 1059 Gene3D G3DSA:3.30.1490.20 142 199 3.9E-25 T 25-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 SMA_RS06210 6af5ff5c4ae507e224a6bd32a6ef028e 1059 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 830 837 - T 25-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 SMA_RS06210 6af5ff5c4ae507e224a6bd32a6ef028e 1059 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 296 303 - T 25-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 SMA_RS06210 6af5ff5c4ae507e224a6bd32a6ef028e 1059 Hamap MF_01210_A Carbamoyl-phosphate synthase large chain [carB]. 5 1059 13.238 T 25-04-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SMA_RS06210 6af5ff5c4ae507e224a6bd32a6ef028e 1059 SUPERFAMILY SSF52440 1 127 2.88E-50 T 25-04-2016 IPR016185 Pre-ATP-grasp domain SMA_RS06210 6af5ff5c4ae507e224a6bd32a6ef028e 1059 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 666 866 6.4E-38 T 25-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 SMA_RS06210 6af5ff5c4ae507e224a6bd32a6ef028e 1059 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 333 1.6E-77 T 25-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 SMA_RS06210 6af5ff5c4ae507e224a6bd32a6ef028e 1059 Gene3D G3DSA:3.40.50.20 532 655 2.3E-58 T 25-04-2016 IPR016185 Pre-ATP-grasp domain SMA_RS06210 6af5ff5c4ae507e224a6bd32a6ef028e 1059 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1048 0.0 T 25-04-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SMA_RS06210 6af5ff5c4ae507e224a6bd32a6ef028e 1059 PANTHER PTHR11405:SF5 1 1053 0.0 T 25-04-2016 SMA_RS06210 6af5ff5c4ae507e224a6bd32a6ef028e 1059 SMART SM00851 949 1037 6.6E-23 T 25-04-2016 IPR011607 Methylglyoxal synthase-like domain SMA_RS06210 6af5ff5c4ae507e224a6bd32a6ef028e 1059 Gene3D G3DSA:3.40.50.20 3 108 3.3E-44 T 25-04-2016 IPR016185 Pre-ATP-grasp domain SMA_RS06210 6af5ff5c4ae507e224a6bd32a6ef028e 1059 PANTHER PTHR11405 1 1053 0.0 T 25-04-2016 SMA_RS06210 6af5ff5c4ae507e224a6bd32a6ef028e 1059 SMART SM01096 420 540 5.5E-69 T 25-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SMA_RS06210 6af5ff5c4ae507e224a6bd32a6ef028e 1059 Gene3D G3DSA:3.40.50.1380 931 1054 3.2E-29 T 25-04-2016 IPR011607 Methylglyoxal synthase-like domain SMA_RS06210 6af5ff5c4ae507e224a6bd32a6ef028e 1059 Pfam PF02142 MGS-like domain 950 1037 1.1E-17 T 25-04-2016 IPR011607 Methylglyoxal synthase-like domain SMA_RS06210 6af5ff5c4ae507e224a6bd32a6ef028e 1059 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 164 178 - T 25-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 SMA_RS06210 6af5ff5c4ae507e224a6bd32a6ef028e 1059 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 702 716 - T 25-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 SMA_RS06210 6af5ff5c4ae507e224a6bd32a6ef028e 1059 Gene3D G3DSA:1.10.1030.10 399 531 2.0E-49 T 25-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SMA_RS06210 6af5ff5c4ae507e224a6bd32a6ef028e 1059 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 1.7E-62 T 25-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SMA_RS06210 6af5ff5c4ae507e224a6bd32a6ef028e 1059 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 1.7E-62 T 25-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SMA_RS06210 6af5ff5c4ae507e224a6bd32a6ef028e 1059 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 1.7E-62 T 25-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SMA_RS06210 6af5ff5c4ae507e224a6bd32a6ef028e 1059 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 296 325 1.7E-62 T 25-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SMA_RS06210 6af5ff5c4ae507e224a6bd32a6ef028e 1059 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 1.7E-62 T 25-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SMA_RS06210 6af5ff5c4ae507e224a6bd32a6ef028e 1059 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 378 396 1.7E-62 T 25-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SMA_RS06210 6af5ff5c4ae507e224a6bd32a6ef028e 1059 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 1.7E-62 T 25-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SMA_RS06210 6af5ff5c4ae507e224a6bd32a6ef028e 1059 SMART SM01209 674 837 0.0014 T 25-04-2016 SMA_RS06210 6af5ff5c4ae507e224a6bd32a6ef028e 1059 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 423 540 1.3E-40 T 25-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SMA_RS06210 6af5ff5c4ae507e224a6bd32a6ef028e 1059 Gene3D G3DSA:3.30.1490.20 679 737 1.4E-29 T 25-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 SMA_RS01730 7dc7464ac507b1f1169324da611b514e 130 Gene3D G3DSA:1.20.120.20 10 126 2.7E-5 T 25-04-2016 SMA_RS03090 a7978a12c4bf9b2a038c803e86e42704 326 PANTHER PTHR11405 4 269 2.0E-153 T 25-04-2016 SMA_RS03090 a7978a12c4bf9b2a038c803e86e42704 326 PANTHER PTHR11405 289 323 2.0E-153 T 25-04-2016 SMA_RS03090 a7978a12c4bf9b2a038c803e86e42704 326 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 7 145 1.3E-41 T 25-04-2016 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 SMA_RS03090 a7978a12c4bf9b2a038c803e86e42704 326 Gene3D G3DSA:3.40.50.1370 5 142 4.9E-51 T 25-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SMA_RS03090 a7978a12c4bf9b2a038c803e86e42704 326 PRINTS PR00102 Ornithine carbamoyltransferase signature 81 94 2.2E-29 T 25-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 SMA_RS03090 a7978a12c4bf9b2a038c803e86e42704 326 PRINTS PR00102 Ornithine carbamoyltransferase signature 222 232 2.2E-29 T 25-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 SMA_RS03090 a7978a12c4bf9b2a038c803e86e42704 326 PRINTS PR00102 Ornithine carbamoyltransferase signature 121 135 2.2E-29 T 25-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 SMA_RS03090 a7978a12c4bf9b2a038c803e86e42704 326 PRINTS PR00102 Ornithine carbamoyltransferase signature 302 313 2.2E-29 T 25-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 SMA_RS03090 a7978a12c4bf9b2a038c803e86e42704 326 PRINTS PR00102 Ornithine carbamoyltransferase signature 48 62 2.2E-29 T 25-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 SMA_RS03090 a7978a12c4bf9b2a038c803e86e42704 326 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 7 323 9.5E-115 T 25-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 SMA_RS03090 a7978a12c4bf9b2a038c803e86e42704 326 Gene3D G3DSA:3.40.50.1370 143 310 5.3E-64 T 25-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SMA_RS03090 a7978a12c4bf9b2a038c803e86e42704 326 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 151 320 6.1E-51 T 25-04-2016 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 SMA_RS03090 a7978a12c4bf9b2a038c803e86e42704 326 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 50 57 - T 25-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SMA_RS03090 a7978a12c4bf9b2a038c803e86e42704 326 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 4 324 76.443 T 25-04-2016 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 SMA_RS03090 a7978a12c4bf9b2a038c803e86e42704 326 PANTHER PTHR11405:SF44 4 269 2.0E-153 T 25-04-2016 SMA_RS03090 a7978a12c4bf9b2a038c803e86e42704 326 PANTHER PTHR11405:SF44 289 323 2.0E-153 T 25-04-2016 SMA_RS03090 a7978a12c4bf9b2a038c803e86e42704 326 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 288 311 2.7E-21 T 25-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SMA_RS03090 a7978a12c4bf9b2a038c803e86e42704 326 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 259 268 2.7E-21 T 25-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SMA_RS03090 a7978a12c4bf9b2a038c803e86e42704 326 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 132 143 2.7E-21 T 25-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SMA_RS03090 a7978a12c4bf9b2a038c803e86e42704 326 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 50 69 2.7E-21 T 25-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SMA_RS03090 a7978a12c4bf9b2a038c803e86e42704 326 SUPERFAMILY SSF53671 4 323 2.8E-93 T 25-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SMA_RS00455 da2bff7a24a3fc6903338c473955e2bb 38 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 10 38 6.0E-10 T 25-04-2016 SMA_RS00455 da2bff7a24a3fc6903338c473955e2bb 38 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 38 7.0E-22 T 25-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS00455 da2bff7a24a3fc6903338c473955e2bb 38 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 38 18.15 T 25-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS00455 da2bff7a24a3fc6903338c473955e2bb 38 Pfam PF00444 Ribosomal protein L36 1 38 2.8E-21 T 25-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS00455 da2bff7a24a3fc6903338c473955e2bb 38 PANTHER PTHR18804 1 38 2.8E-20 T 25-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS00455 da2bff7a24a3fc6903338c473955e2bb 38 SUPERFAMILY SSF57840 1 38 1.7E-17 T 25-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS00455 da2bff7a24a3fc6903338c473955e2bb 38 ProSitePatterns PS00828 Ribosomal protein L36 signature. 11 37 - T 25-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS07455 ad6126e8fc053647e97e223846d4db48 284 PANTHER PTHR34135:SF2 67 263 5.7E-42 T 25-04-2016 SMA_RS07455 ad6126e8fc053647e97e223846d4db48 284 Gene3D G3DSA:3.20.20.80 67 261 1.1E-37 T 25-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 SMA_RS07455 ad6126e8fc053647e97e223846d4db48 284 SUPERFAMILY SSF51445 69 269 2.0E-36 T 25-04-2016 IPR017853 Glycoside hydrolase superfamily SMA_RS07455 ad6126e8fc053647e97e223846d4db48 284 Pfam PF01183 Glycosyl hydrolases family 25 69 253 5.8E-15 T 25-04-2016 IPR002053 Glycoside hydrolase, family 25 GO:0003796|GO:0009253|GO:0016998 SMA_RS07455 ad6126e8fc053647e97e223846d4db48 284 PANTHER PTHR34135 67 263 5.7E-42 T 25-04-2016 SMA_RS06125 40119d4c1b656cf6c6489b6d6171ef7a 237 SUPERFAMILY SSF46785 5 68 4.61E-10 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMA_RS06125 40119d4c1b656cf6c6489b6d6171ef7a 237 SMART SM01134 63 220 4.2E-65 T 25-04-2016 SMA_RS06125 40119d4c1b656cf6c6489b6d6171ef7a 237 Gene3D G3DSA:1.10.10.10 3 45 8.8E-4 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMA_RS06125 40119d4c1b656cf6c6489b6d6171ef7a 237 Pfam PF00455 DeoR C terminal sensor domain 65 217 2.8E-47 T 25-04-2016 IPR014036 DeoR C-terminal sensor domain SMA_RS06125 40119d4c1b656cf6c6489b6d6171ef7a 237 PANTHER PTHR30363:SF4 1 234 3.4E-78 T 25-04-2016 SMA_RS06125 40119d4c1b656cf6c6489b6d6171ef7a 237 SMART SM00420 1 48 2.0E-9 T 25-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 SMA_RS06125 40119d4c1b656cf6c6489b6d6171ef7a 237 SUPERFAMILY SSF100950 64 217 7.45E-34 T 25-04-2016 SMA_RS06125 40119d4c1b656cf6c6489b6d6171ef7a 237 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 14 28 1.4E-8 T 25-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 SMA_RS06125 40119d4c1b656cf6c6489b6d6171ef7a 237 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 28 46 1.4E-8 T 25-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 SMA_RS06125 40119d4c1b656cf6c6489b6d6171ef7a 237 PANTHER PTHR30363 1 234 3.4E-78 T 25-04-2016 SMA_RS06125 40119d4c1b656cf6c6489b6d6171ef7a 237 Pfam PF08220 DeoR-like helix-turn-helix domain 3 50 6.4E-14 T 25-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 SMA_RS06125 40119d4c1b656cf6c6489b6d6171ef7a 237 Gene3D G3DSA:3.40.50.1360 66 201 1.2E-15 T 25-04-2016 SMA_RS06570 11eee62ceb6f4451aaafb5c2aa00f480 455 PANTHER PTHR30193 123 451 2.3E-86 T 25-04-2016 SMA_RS06570 11eee62ceb6f4451aaafb5c2aa00f480 455 SUPERFAMILY SSF160964 162 203 2.75E-6 T 25-04-2016 SMA_RS06570 11eee62ceb6f4451aaafb5c2aa00f480 455 Gene3D G3DSA:1.20.58.370 162 185 1.3E-4 T 25-04-2016 SMA_RS06570 11eee62ceb6f4451aaafb5c2aa00f480 455 Gene3D G3DSA:1.10.3720.10 213 445 4.1E-54 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SMA_RS06570 11eee62ceb6f4451aaafb5c2aa00f480 455 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 235 441 2.4E-23 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SMA_RS06570 11eee62ceb6f4451aaafb5c2aa00f480 455 PANTHER PTHR30193:SF17 123 451 2.3E-86 T 25-04-2016 SMA_RS06570 11eee62ceb6f4451aaafb5c2aa00f480 455 SUPERFAMILY SSF161098 200 441 1.96E-50 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SMA_RS05960 6158eefbe254830a15d1bb3cf4780c23 409 PANTHER PTHR24423 192 397 2.4E-27 T 25-04-2016 SMA_RS05960 6158eefbe254830a15d1bb3cf4780c23 409 PANTHER PTHR24423 1 8 2.4E-27 T 25-04-2016 SMA_RS05960 6158eefbe254830a15d1bb3cf4780c23 409 Pfam PF00512 His Kinase A (phospho-acceptor) domain 195 255 1.1E-8 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMA_RS05960 6158eefbe254830a15d1bb3cf4780c23 409 SUPERFAMILY SSF47384 185 255 2.16E-11 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMA_RS05960 6158eefbe254830a15d1bb3cf4780c23 409 SMART SM00388 194 256 3.0E-10 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMA_RS05960 6158eefbe254830a15d1bb3cf4780c23 409 SUPERFAMILY SSF55874 263 405 1.31E-18 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMA_RS05960 6158eefbe254830a15d1bb3cf4780c23 409 SMART SM00387 300 409 1.3E-9 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMA_RS05960 6158eefbe254830a15d1bb3cf4780c23 409 Gene3D G3DSA:3.30.565.10 243 399 1.3E-20 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMA_RS05960 6158eefbe254830a15d1bb3cf4780c23 409 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 302 404 7.5E-10 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMA_RS05960 6158eefbe254830a15d1bb3cf4780c23 409 Gene3D G3DSA:1.10.287.130 193 242 2.0E-11 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMA_RS06040 f36ff6e0aef2f26ca862bac12bd569bf 163 Gene3D G3DSA:3.30.1130.10 16 146 4.3E-56 T 25-04-2016 SMA_RS06040 f36ff6e0aef2f26ca862bac12bd569bf 163 PIRSF PIRSF027377 5 145 1.6E-61 T 25-04-2016 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 SMA_RS06040 f36ff6e0aef2f26ca862bac12bd569bf 163 Pfam PF14489 QueF-like protein 60 138 2.3E-34 T 25-04-2016 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 SMA_RS06040 f36ff6e0aef2f26ca862bac12bd569bf 163 PANTHER PTHR34354 1 149 2.0E-66 T 25-04-2016 SMA_RS06040 f36ff6e0aef2f26ca862bac12bd569bf 163 SUPERFAMILY SSF55620 26 132 2.52E-28 T 25-04-2016 SMA_RS06040 f36ff6e0aef2f26ca862bac12bd569bf 163 PANTHER PTHR34354:SF1 1 149 2.0E-66 T 25-04-2016 SMA_RS06040 f36ff6e0aef2f26ca862bac12bd569bf 163 TIGRFAM TIGR03139 QueF-II: 7-cyano-7-deazaguanine reductase 26 137 1.7E-53 T 25-04-2016 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 SMA_RS06040 f36ff6e0aef2f26ca862bac12bd569bf 163 Hamap MF_00818 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 163 69.6 T 25-04-2016 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 SMA_RS08565 717674cc06d284eb89461b5a4ff417c7 280 Gene3D G3DSA:3.40.190.10 226 268 5.5E-30 T 25-04-2016 SMA_RS08565 717674cc06d284eb89461b5a4ff417c7 280 Gene3D G3DSA:3.40.190.10 38 116 5.5E-30 T 25-04-2016 SMA_RS08565 717674cc06d284eb89461b5a4ff417c7 280 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 41 264 1.0E-50 T 25-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SMA_RS08565 717674cc06d284eb89461b5a4ff417c7 280 SUPERFAMILY SSF53850 38 268 3.34E-48 T 25-04-2016 SMA_RS08565 717674cc06d284eb89461b5a4ff417c7 280 Gene3D G3DSA:3.40.190.10 117 225 8.2E-22 T 25-04-2016 SMA_RS08565 717674cc06d284eb89461b5a4ff417c7 280 PANTHER PTHR18966:SF208 37 267 1.2E-22 T 25-04-2016 SMA_RS08565 717674cc06d284eb89461b5a4ff417c7 280 PANTHER PTHR18966 37 267 1.2E-22 T 25-04-2016 SMA_RS08565 717674cc06d284eb89461b5a4ff417c7 280 SMART SM00062 39 266 1.2E-44 T 25-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SMA_RS00210 3001363cb590e82d0882e275f772ba20 492 SUPERFAMILY SSF54001 377 480 2.55E-22 T 25-04-2016 SMA_RS00210 3001363cb590e82d0882e275f772ba20 492 PRINTS PR01852 Streptococcal non-M secreted SibA protein signature 454 477 4.4E-40 T 25-04-2016 IPR009148 Streptococcal non-M secreted SibA SMA_RS00210 3001363cb590e82d0882e275f772ba20 492 PRINTS PR01852 Streptococcal non-M secreted SibA protein signature 409 433 4.4E-40 T 25-04-2016 IPR009148 Streptococcal non-M secreted SibA SMA_RS00210 3001363cb590e82d0882e275f772ba20 492 PRINTS PR01852 Streptococcal non-M secreted SibA protein signature 284 311 4.4E-40 T 25-04-2016 IPR009148 Streptococcal non-M secreted SibA SMA_RS00210 3001363cb590e82d0882e275f772ba20 492 PRINTS PR01852 Streptococcal non-M secreted SibA protein signature 384 406 4.4E-40 T 25-04-2016 IPR009148 Streptococcal non-M secreted SibA SMA_RS00210 3001363cb590e82d0882e275f772ba20 492 Pfam PF05257 CHAP domain 381 461 1.8E-12 T 25-04-2016 IPR007921 CHAP domain SMA_RS04705 379974ec924daad98342cf4985ba834f 207 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 7 16 - T 25-04-2016 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824|GO:0008152 UniPathway: UPA00109 SMA_RS04705 379974ec924daad98342cf4985ba834f 207 SMART SM00855 4 156 1.2E-19 T 25-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 SMA_RS04705 379974ec924daad98342cf4985ba834f 207 SUPERFAMILY SSF53254 1 188 1.04E-43 T 25-04-2016 IPR029033 Histidine phosphatase superfamily SMA_RS04705 379974ec924daad98342cf4985ba834f 207 PANTHER PTHR23029:SF38 1 182 1.0E-60 T 25-04-2016 SMA_RS04705 379974ec924daad98342cf4985ba834f 207 Gene3D G3DSA:3.40.50.1240 2 190 2.4E-45 T 25-04-2016 IPR029033 Histidine phosphatase superfamily SMA_RS04705 379974ec924daad98342cf4985ba834f 207 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 5 191 7.5E-40 T 25-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 SMA_RS04705 379974ec924daad98342cf4985ba834f 207 PANTHER PTHR23029 1 182 1.0E-60 T 25-04-2016 SMA_RS06550 7e9aaea488217e1af2cd212a1689bbda 754 Gene3D G3DSA:3.40.50.2000 423 738 6.9E-116 T 25-04-2016 SMA_RS06550 7e9aaea488217e1af2cd212a1689bbda 754 SUPERFAMILY SSF53756 11 753 3.06E-251 T 25-04-2016 SMA_RS06550 7e9aaea488217e1af2cd212a1689bbda 754 PANTHER PTHR11468:SF3 13 752 9.0E-284 T 25-04-2016 SMA_RS06550 7e9aaea488217e1af2cd212a1689bbda 754 PANTHER PTHR11468 13 752 9.0E-284 T 25-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 SMA_RS06550 7e9aaea488217e1af2cd212a1689bbda 754 ProSitePatterns PS00102 Phosphorylase pyridoxal-phosphate attachment site. 596 608 - T 25-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 SMA_RS06550 7e9aaea488217e1af2cd212a1689bbda 754 PIRSF PIRSF000460 3 754 3.3E-196 T 25-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 SMA_RS06550 7e9aaea488217e1af2cd212a1689bbda 754 Pfam PF00343 Carbohydrate phosphorylase 79 752 4.0E-258 T 25-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 SMA_RS06550 7e9aaea488217e1af2cd212a1689bbda 754 TIGRFAM TIGR02093 P_ylase: glycogen/starch/alpha-glucan phosphorylases 11 752 2.3E-268 T 25-04-2016 IPR011833 Glycogen/starch/alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 SMA_RS06550 7e9aaea488217e1af2cd212a1689bbda 754 Gene3D G3DSA:3.40.50.2000 11 422 3.2E-136 T 25-04-2016 SMA_RS01375 fb02af7ec8e1fd964173c73b67dea3c3 214 SMART SM00100 3 126 1.3E-8 T 25-04-2016 IPR000595 Cyclic nucleotide-binding domain SMA_RS01375 fb02af7ec8e1fd964173c73b67dea3c3 214 Gene3D G3DSA:1.10.10.10 162 209 2.3E-4 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMA_RS01375 fb02af7ec8e1fd964173c73b67dea3c3 214 PANTHER PTHR24567:SF26 4 210 1.4E-37 T 25-04-2016 SMA_RS01375 fb02af7ec8e1fd964173c73b67dea3c3 214 PANTHER PTHR24567 4 210 1.4E-37 T 25-04-2016 SMA_RS01375 fb02af7ec8e1fd964173c73b67dea3c3 214 SUPERFAMILY SSF51206 22 132 1.57E-20 T 25-04-2016 IPR018490 Cyclic nucleotide-binding-like SMA_RS01375 fb02af7ec8e1fd964173c73b67dea3c3 214 Pfam PF00027 Cyclic nucleotide-binding domain 28 111 1.5E-14 T 25-04-2016 IPR000595 Cyclic nucleotide-binding domain SMA_RS01375 fb02af7ec8e1fd964173c73b67dea3c3 214 SUPERFAMILY SSF46785 145 209 5.46E-6 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMA_RS01375 fb02af7ec8e1fd964173c73b67dea3c3 214 Pfam PF13545 Crp-like helix-turn-helix domain 146 209 9.5E-7 T 25-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 SMA_RS01375 fb02af7ec8e1fd964173c73b67dea3c3 214 Gene3D G3DSA:2.60.120.10 12 133 2.7E-21 T 25-04-2016 IPR014710 RmlC-like jelly roll fold SMA_RS04680 e01e7642020c5e77b38255a3d27a8280 405 SUPERFAMILY SSF54427 317 395 8.59E-5 T 25-04-2016 IPR032710 NTF2-like domain SMA_RS04680 e01e7642020c5e77b38255a3d27a8280 405 PANTHER PTHR11562:SF18 16 297 7.7E-69 T 25-04-2016 SMA_RS04680 e01e7642020c5e77b38255a3d27a8280 405 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 12 288 9.7E-60 T 25-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 SMA_RS04680 e01e7642020c5e77b38255a3d27a8280 405 SUPERFAMILY SSF161111 8 209 1.23E-47 T 25-04-2016 SMA_RS04680 e01e7642020c5e77b38255a3d27a8280 405 SUPERFAMILY SSF160240 211 288 2.22E-18 T 25-04-2016 SMA_RS04680 e01e7642020c5e77b38255a3d27a8280 405 PANTHER PTHR11562 16 297 7.7E-69 T 25-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 SMA_RS04680 e01e7642020c5e77b38255a3d27a8280 405 Pfam PF16916 Dimerisation domain of Zinc Transporter 212 288 1.6E-17 T 25-04-2016 IPR027470 Cation efflux protein, cytoplasmic domain SMA_RS04680 e01e7642020c5e77b38255a3d27a8280 405 Gene3D G3DSA:3.10.450.50 318 395 6.3E-4 T 25-04-2016 IPR032710 NTF2-like domain SMA_RS04680 e01e7642020c5e77b38255a3d27a8280 405 Pfam PF01545 Cation efflux family 16 207 5.0E-45 T 25-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 SMA_RS04680 e01e7642020c5e77b38255a3d27a8280 405 Gene3D G3DSA:1.20.1510.10 16 207 7.2E-41 T 25-04-2016 IPR027469 Cation efflux protein transmembrane domain SMA_RS04680 e01e7642020c5e77b38255a3d27a8280 405 Gene3D G3DSA:3.30.70.1350 209 288 1.1E-24 T 25-04-2016 IPR027470 Cation efflux protein, cytoplasmic domain SMA_RS05340 93da99e88f168ea2c5ffec049d877a97 436 Pfam PF17126 RsmF rRNA methyltransferase first C-terminal domain 308 369 5.4E-22 T 25-04-2016 IPR031340 Ribosomal RNA small subunit methyltransferase F, first C-terminal domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SMA_RS05340 93da99e88f168ea2c5ffec049d877a97 436 Pfam PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF 3 81 2.6E-19 T 25-04-2016 IPR031341 Ribosomal RNA small subunit methyltransferase F, N-terminal KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SMA_RS05340 93da99e88f168ea2c5ffec049d877a97 436 SUPERFAMILY SSF53335 3 281 7.83E-61 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMA_RS05340 93da99e88f168ea2c5ffec049d877a97 436 PANTHER PTHR22807:SF36 1 337 6.9E-119 T 25-04-2016 SMA_RS05340 93da99e88f168ea2c5ffec049d877a97 436 Pfam PF13636 RNA-binding PUA-like domain of methyltransferase RsmF 387 434 5.2E-15 T 25-04-2016 IPR027391 rRNA small subunit methyltransferase F, RNA-binding PUA-like domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SMA_RS05340 93da99e88f168ea2c5ffec049d877a97 436 Pfam PF01189 16S rRNA methyltransferase RsmB/F 85 281 3.9E-47 T 25-04-2016 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SMA_RS05340 93da99e88f168ea2c5ffec049d877a97 436 PANTHER PTHR22807 1 337 6.9E-119 T 25-04-2016 SMA_RS05340 93da99e88f168ea2c5ffec049d877a97 436 Gene3D G3DSA:3.40.50.150 79 281 4.4E-58 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMA_RS05340 93da99e88f168ea2c5ffec049d877a97 436 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 67 81 1.4E-21 T 25-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SMA_RS05340 93da99e88f168ea2c5ffec049d877a97 436 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 163 175 1.4E-21 T 25-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SMA_RS05340 93da99e88f168ea2c5ffec049d877a97 436 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 213 229 1.4E-21 T 25-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SMA_RS05340 93da99e88f168ea2c5ffec049d877a97 436 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 96 106 1.4E-21 T 25-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SMA_RS05340 93da99e88f168ea2c5ffec049d877a97 436 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 265 282 1.4E-21 T 25-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SMA_RS04995 c6379b934352fb03b2027030cd39a142 311 PANTHER PTHR30349:SF20 11 308 2.8E-28 T 25-04-2016 SMA_RS04995 c6379b934352fb03b2027030cd39a142 311 SUPERFAMILY SSF56349 11 296 1.41E-51 T 25-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 SMA_RS04995 c6379b934352fb03b2027030cd39a142 311 Pfam PF00589 Phage integrase family 118 290 5.3E-22 T 25-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 SMA_RS04995 c6379b934352fb03b2027030cd39a142 311 PANTHER PTHR30349 11 308 2.8E-28 T 25-04-2016 SMA_RS04995 c6379b934352fb03b2027030cd39a142 311 Gene3D G3DSA:1.10.443.10 115 301 8.8E-39 T 25-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 SMA_RS04995 c6379b934352fb03b2027030cd39a142 311 Gene3D G3DSA:1.10.150.130 13 112 8.6E-20 T 25-04-2016 IPR023109 Integrase/recombinase, N-terminal SMA_RS05065 129c957cd1c1d6f129213aaf3424da7c 232 PANTHER PTHR26402 16 229 2.0E-80 T 25-04-2016 SMA_RS05065 129c957cd1c1d6f129213aaf3424da7c 232 Pfam PF00072 Response regulator receiver domain 18 125 1.6E-20 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMA_RS05065 129c957cd1c1d6f129213aaf3424da7c 232 SUPERFAMILY SSF46894 144 231 3.97E-20 T 25-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SMA_RS05065 129c957cd1c1d6f129213aaf3424da7c 232 PANTHER PTHR26402:SF519 16 229 2.0E-80 T 25-04-2016 SMA_RS05065 129c957cd1c1d6f129213aaf3424da7c 232 SMART SM00448 16 125 1.5E-26 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMA_RS05065 129c957cd1c1d6f129213aaf3424da7c 232 SUPERFAMILY SSF52172 9 142 5.12E-31 T 25-04-2016 IPR011006 CheY-like superfamily SMA_RS05065 129c957cd1c1d6f129213aaf3424da7c 232 Pfam PF00486 Transcriptional regulatory protein, C terminal 159 230 1.3E-22 T 25-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SMA_RS05065 129c957cd1c1d6f129213aaf3424da7c 232 SMART SM00862 157 231 4.9E-21 T 25-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SMA_RS05065 129c957cd1c1d6f129213aaf3424da7c 232 Gene3D G3DSA:1.10.10.10 154 231 1.7E-22 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMA_RS05065 129c957cd1c1d6f129213aaf3424da7c 232 Gene3D G3DSA:3.40.50.2300 12 136 6.0E-30 T 25-04-2016 SMA_RS06270 e06802f18952df3f1e143a32ccd0eb10 404 PANTHER PTHR33393:SF2 54 306 6.9E-40 T 25-04-2016 SMA_RS06270 e06802f18952df3f1e143a32ccd0eb10 404 PANTHER PTHR33393 54 306 6.9E-40 T 25-04-2016 SMA_RS06270 e06802f18952df3f1e143a32ccd0eb10 404 SMART SM00854 58 305 1.6E-88 T 25-04-2016 IPR019079 Capsule synthesis protein, CapA SMA_RS06270 e06802f18952df3f1e143a32ccd0eb10 404 SUPERFAMILY SSF56300 59 312 9.62E-42 T 25-04-2016 IPR029052 Metallo-dependent phosphatase-like SMA_RS06270 e06802f18952df3f1e143a32ccd0eb10 404 Pfam PF09587 Bacterial capsule synthesis protein PGA_cap 59 305 1.5E-70 T 25-04-2016 IPR019079 Capsule synthesis protein, CapA SMA_RS06270 e06802f18952df3f1e143a32ccd0eb10 404 Gene3D G3DSA:3.60.21.10 53 399 8.9E-22 T 25-04-2016 IPR029052 Metallo-dependent phosphatase-like SMA_RS05140 2f2a817efb9ab5b3e59a7d1d3892c35a 512 Pfam PF12848 ABC transporter 229 314 5.6E-22 T 25-04-2016 IPR032781 ABC-transporter extension domain SMA_RS05140 2f2a817efb9ab5b3e59a7d1d3892c35a 512 PANTHER PTHR19211 1 510 8.7E-305 T 25-04-2016 SMA_RS05140 2f2a817efb9ab5b3e59a7d1d3892c35a 512 Pfam PF00005 ABC transporter 340 468 6.8E-20 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMA_RS05140 2f2a817efb9ab5b3e59a7d1d3892c35a 512 Pfam PF00005 ABC transporter 20 190 9.9E-25 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMA_RS05140 2f2a817efb9ab5b3e59a7d1d3892c35a 512 SUPERFAMILY SSF52540 306 504 7.79E-35 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS05140 2f2a817efb9ab5b3e59a7d1d3892c35a 512 ProSitePatterns PS00211 ABC transporters family signature. 162 176 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SMA_RS05140 2f2a817efb9ab5b3e59a7d1d3892c35a 512 ProSitePatterns PS00211 ABC transporters family signature. 440 454 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SMA_RS05140 2f2a817efb9ab5b3e59a7d1d3892c35a 512 SMART SM00382 28 238 1.5E-9 T 25-04-2016 IPR003593 AAA+ ATPase domain SMA_RS05140 2f2a817efb9ab5b3e59a7d1d3892c35a 512 SMART SM00382 348 511 1.4E-5 T 25-04-2016 IPR003593 AAA+ ATPase domain SMA_RS05140 2f2a817efb9ab5b3e59a7d1d3892c35a 512 Gene3D G3DSA:3.40.50.300 325 504 1.1E-34 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS05140 2f2a817efb9ab5b3e59a7d1d3892c35a 512 Gene3D G3DSA:3.40.50.300 123 279 2.4E-50 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS05140 2f2a817efb9ab5b3e59a7d1d3892c35a 512 Gene3D G3DSA:3.40.50.300 2 90 2.4E-50 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS05140 2f2a817efb9ab5b3e59a7d1d3892c35a 512 PANTHER PTHR19211:SF65 1 510 8.7E-305 T 25-04-2016 SMA_RS05140 2f2a817efb9ab5b3e59a7d1d3892c35a 512 SUPERFAMILY SSF52540 4 244 1.56E-47 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS03065 a8734bf635353571a0ec7e435794f1dd 932 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 14 833 7.1E-284 T 25-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 SMA_RS03065 a8734bf635353571a0ec7e435794f1dd 932 Gene3D G3DSA:1.10.730.10 635 782 1.2E-42 T 25-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SMA_RS03065 a8734bf635353571a0ec7e435794f1dd 932 Gene3D G3DSA:3.40.50.620 394 631 1.8E-141 T 25-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SMA_RS03065 a8734bf635353571a0ec7e435794f1dd 932 Gene3D G3DSA:3.40.50.620 16 203 1.8E-141 T 25-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SMA_RS03065 a8734bf635353571a0ec7e435794f1dd 932 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 520 533 2.9E-27 T 25-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 SMA_RS03065 a8734bf635353571a0ec7e435794f1dd 932 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 50 61 2.9E-27 T 25-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 SMA_RS03065 a8734bf635353571a0ec7e435794f1dd 932 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 228 251 2.9E-27 T 25-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 SMA_RS03065 a8734bf635353571a0ec7e435794f1dd 932 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 554 563 2.9E-27 T 25-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 SMA_RS03065 a8734bf635353571a0ec7e435794f1dd 932 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 392 407 2.9E-27 T 25-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 SMA_RS03065 a8734bf635353571a0ec7e435794f1dd 932 Pfam PF08264 Anticodon-binding domain of tRNA 678 832 2.6E-26 T 25-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 SMA_RS03065 a8734bf635353571a0ec7e435794f1dd 932 SUPERFAMILY SSF47323 645 916 3.92E-71 T 25-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SMA_RS03065 a8734bf635353571a0ec7e435794f1dd 932 PANTHER PTHR11946 885 916 0.0 T 25-04-2016 SMA_RS03065 a8734bf635353571a0ec7e435794f1dd 932 PANTHER PTHR11946 5 249 0.0 T 25-04-2016 SMA_RS03065 a8734bf635353571a0ec7e435794f1dd 932 PANTHER PTHR11946 274 866 0.0 T 25-04-2016 SMA_RS03065 a8734bf635353571a0ec7e435794f1dd 932 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 27 634 1.3E-203 T 25-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SMA_RS03065 a8734bf635353571a0ec7e435794f1dd 932 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 1 916 19.484 T 25-04-2016 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5 SMA_RS03065 a8734bf635353571a0ec7e435794f1dd 932 Gene3D G3DSA:3.90.740.10 205 382 1.9E-47 T 25-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 SMA_RS03065 a8734bf635353571a0ec7e435794f1dd 932 PANTHER PTHR11946:SF11 885 916 0.0 T 25-04-2016 SMA_RS03065 a8734bf635353571a0ec7e435794f1dd 932 PANTHER PTHR11946:SF11 5 249 0.0 T 25-04-2016 SMA_RS03065 a8734bf635353571a0ec7e435794f1dd 932 PANTHER PTHR11946:SF11 274 866 0.0 T 25-04-2016 SMA_RS03065 a8734bf635353571a0ec7e435794f1dd 932 SUPERFAMILY SSF52374 1 200 1.18E-151 T 25-04-2016 SMA_RS03065 a8734bf635353571a0ec7e435794f1dd 932 SUPERFAMILY SSF52374 394 641 1.18E-151 T 25-04-2016 SMA_RS03065 a8734bf635353571a0ec7e435794f1dd 932 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 57 68 - T 25-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SMA_RS03065 a8734bf635353571a0ec7e435794f1dd 932 SUPERFAMILY SSF50677 202 394 1.15E-44 T 25-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 SMA_RS04385 007f5e6de1f68f5cdb496c8730ab4d52 470 Pfam PF01943 Polysaccharide biosynthesis protein 4 261 1.2E-32 T 25-04-2016 IPR002797 Polysaccharide biosynthesis protein GO:0016020 SMA_RS04385 007f5e6de1f68f5cdb496c8730ab4d52 470 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 317 457 1.3E-21 T 25-04-2016 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain SMA_RS04385 007f5e6de1f68f5cdb496c8730ab4d52 470 PANTHER PTHR30250 3 460 7.6E-53 T 25-04-2016 SMA_RS04385 007f5e6de1f68f5cdb496c8730ab4d52 470 PANTHER PTHR30250:SF0 3 460 7.6E-53 T 25-04-2016 SMA_RS05300 0fdc92c9b06ab80b5bd41880afa520b9 847 Gene3D G3DSA:1.10.390.10 302 450 1.6E-47 T 25-04-2016 SMA_RS05300 0fdc92c9b06ab80b5bd41880afa520b9 847 Pfam PF11838 ERAP1-like C-terminal domain 512 825 9.1E-45 T 25-04-2016 IPR024571 ERAP1-like C-terminal domain SMA_RS05300 0fdc92c9b06ab80b5bd41880afa520b9 847 SUPERFAMILY SSF63737 11 192 1.19E-45 T 25-04-2016 SMA_RS05300 0fdc92c9b06ab80b5bd41880afa520b9 847 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 126 141 1.1E-30 T 25-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 SMA_RS05300 0fdc92c9b06ab80b5bd41880afa520b9 847 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 308 320 1.1E-30 T 25-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 SMA_RS05300 0fdc92c9b06ab80b5bd41880afa520b9 847 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 289 304 1.1E-30 T 25-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 SMA_RS05300 0fdc92c9b06ab80b5bd41880afa520b9 847 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 254 264 1.1E-30 T 25-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 SMA_RS05300 0fdc92c9b06ab80b5bd41880afa520b9 847 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 175 190 1.1E-30 T 25-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 SMA_RS05300 0fdc92c9b06ab80b5bd41880afa520b9 847 Pfam PF01433 Peptidase family M1 8 382 1.2E-129 T 25-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 SMA_RS05300 0fdc92c9b06ab80b5bd41880afa520b9 847 PANTHER PTHR11533 9 843 1.7E-249 T 25-04-2016 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase GO:0006508 SMA_RS05300 0fdc92c9b06ab80b5bd41880afa520b9 847 PANTHER PTHR11533:SF163 9 843 1.7E-249 T 25-04-2016 SMA_RS05300 0fdc92c9b06ab80b5bd41880afa520b9 847 SUPERFAMILY SSF55486 200 449 1.47E-79 T 25-04-2016 SMA_RS05705 4cc0742b97c3c72302ccd62599dd6599 566 Pfam PF02378 Phosphotransferase system, EIIC 28 348 1.3E-71 T 25-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 SMA_RS05705 4cc0742b97c3c72302ccd62599dd6599 566 PANTHER PTHR33989:SF6 1 440 1.2E-247 T 25-04-2016 SMA_RS05705 4cc0742b97c3c72302ccd62599dd6599 566 SUPERFAMILY SSF52794 465 565 3.4E-18 T 25-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 SMA_RS05705 4cc0742b97c3c72302ccd62599dd6599 566 TIGRFAM TIGR00394 lac_pts_IIC: PTS system, lactose-specific IIC component 11 422 8.7E-238 T 25-04-2016 IPR004801 Phosphotransferase system, lactose-specific IIC component GO:0008982|GO:0016021|GO:0022869 SMA_RS05705 4cc0742b97c3c72302ccd62599dd6599 566 PANTHER PTHR33989 1 440 1.2E-247 T 25-04-2016 SMA_RS05705 4cc0742b97c3c72302ccd62599dd6599 566 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 466 534 1.0E-9 T 25-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 SMA_RS05705 4cc0742b97c3c72302ccd62599dd6599 566 TIGRFAM TIGR00853 pts-lac: PTS system, lactose/cellobiose family IIB component 421 560 4.2E-61 T 25-04-2016 IPR013012 Phosphotransferase system, EIIB component, type 3 GO:0008982|GO:0009401 SMA_RS05705 4cc0742b97c3c72302ccd62599dd6599 566 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 13 422 2.9E-76 T 25-04-2016 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 SMA_RS05705 4cc0742b97c3c72302ccd62599dd6599 566 Gene3D G3DSA:3.40.50.270 463 565 1.0E-21 T 25-04-2016 SMA_RS09880 bc4703fc4247ec30643a49f85d23e2ff 255 Pfam PF02677 Uncharacterized BCR, COG1636 39 217 2.5E-65 T 25-04-2016 IPR003828 Protein of unknown function DUF208 SMA_RS09880 bc4703fc4247ec30643a49f85d23e2ff 255 PANTHER PTHR36701 23 255 1.0E-78 T 25-04-2016 SMA_RS05620 dd74f513564708dc7cc1808f52b4198a 292 PANTHER PTHR18966 40 269 2.9E-56 T 25-04-2016 SMA_RS05620 dd74f513564708dc7cc1808f52b4198a 292 PANTHER PTHR18966:SF191 40 269 2.9E-56 T 25-04-2016 SMA_RS05620 dd74f513564708dc7cc1808f52b4198a 292 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 56 259 1.4E-47 T 25-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SMA_RS05620 dd74f513564708dc7cc1808f52b4198a 292 Gene3D G3DSA:3.40.190.10 133 225 1.6E-23 T 25-04-2016 SMA_RS05620 dd74f513564708dc7cc1808f52b4198a 292 SMART SM00062 55 274 4.1E-65 T 25-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SMA_RS05620 dd74f513564708dc7cc1808f52b4198a 292 SUPERFAMILY SSF53850 6 268 1.09E-60 T 25-04-2016 SMA_RS05620 dd74f513564708dc7cc1808f52b4198a 292 Gene3D G3DSA:3.40.190.10 233 267 7.2E-34 T 25-04-2016 SMA_RS05620 dd74f513564708dc7cc1808f52b4198a 292 Gene3D G3DSA:3.40.190.10 51 132 7.2E-34 T 25-04-2016 SMA_RS04690 14413df57b8b788f897baf8da4a79f2c 442 Pfam PF01235 Sodium:alanine symporter family 48 441 2.9E-144 T 25-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SMA_RS04690 14413df57b8b788f897baf8da4a79f2c 442 PANTHER PTHR30330:SF3 1 440 9.4E-213 T 25-04-2016 SMA_RS04690 14413df57b8b788f897baf8da4a79f2c 442 PRINTS PR00175 Sodium/alanine symporter signature 181 199 6.2E-57 T 25-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SMA_RS04690 14413df57b8b788f897baf8da4a79f2c 442 PRINTS PR00175 Sodium/alanine symporter signature 348 370 6.2E-57 T 25-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SMA_RS04690 14413df57b8b788f897baf8da4a79f2c 442 PRINTS PR00175 Sodium/alanine symporter signature 87 109 6.2E-57 T 25-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SMA_RS04690 14413df57b8b788f897baf8da4a79f2c 442 PRINTS PR00175 Sodium/alanine symporter signature 304 322 6.2E-57 T 25-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SMA_RS04690 14413df57b8b788f897baf8da4a79f2c 442 PRINTS PR00175 Sodium/alanine symporter signature 209 228 6.2E-57 T 25-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SMA_RS04690 14413df57b8b788f897baf8da4a79f2c 442 PRINTS PR00175 Sodium/alanine symporter signature 407 427 6.2E-57 T 25-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SMA_RS04690 14413df57b8b788f897baf8da4a79f2c 442 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 87 102 - T 25-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SMA_RS04690 14413df57b8b788f897baf8da4a79f2c 442 TIGRFAM TIGR00835 agcS: amino acid carrier protein 13 438 9.8E-154 T 25-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SMA_RS04690 14413df57b8b788f897baf8da4a79f2c 442 PANTHER PTHR30330 1 440 9.4E-213 T 25-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SMA_RS01170 b855e7e17d32a0c7c03c2dac691e8edc 147 PANTHER PTHR10472 2 147 5.4E-76 T 25-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 SMA_RS01170 b855e7e17d32a0c7c03c2dac691e8edc 147 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 1 144 34.975 T 25-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 SMA_RS01170 b855e7e17d32a0c7c03c2dac691e8edc 147 SUPERFAMILY SSF69500 1 144 2.22E-58 T 25-04-2016 IPR023509 D-Tyr tRNAtyr deacylase-like domain SMA_RS01170 b855e7e17d32a0c7c03c2dac691e8edc 147 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 1 144 3.7E-59 T 25-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 SMA_RS01170 b855e7e17d32a0c7c03c2dac691e8edc 147 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 2 143 4.4E-56 T 25-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 SMA_RS01170 b855e7e17d32a0c7c03c2dac691e8edc 147 Gene3D G3DSA:3.50.80.10 1 144 4.0E-60 T 25-04-2016 IPR023509 D-Tyr tRNAtyr deacylase-like domain SMA_RS09040 892c93f64298fea74bdc808db8e92669 550 Pfam PF00512 His Kinase A (phospho-acceptor) domain 332 396 2.1E-16 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMA_RS09040 892c93f64298fea74bdc808db8e92669 550 Gene3D G3DSA:1.10.287.130 324 382 4.6E-20 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMA_RS09040 892c93f64298fea74bdc808db8e92669 550 PRINTS PR00344 Bacterial sensor protein C-terminal signature 512 530 6.9E-14 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMA_RS09040 892c93f64298fea74bdc808db8e92669 550 PRINTS PR00344 Bacterial sensor protein C-terminal signature 495 505 6.9E-14 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMA_RS09040 892c93f64298fea74bdc808db8e92669 550 PRINTS PR00344 Bacterial sensor protein C-terminal signature 536 549 6.9E-14 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMA_RS09040 892c93f64298fea74bdc808db8e92669 550 PRINTS PR00344 Bacterial sensor protein C-terminal signature 477 491 6.9E-14 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMA_RS09040 892c93f64298fea74bdc808db8e92669 550 SMART SM00091 222 288 0.0016 T 25-04-2016 IPR000014 PAS domain SMA_RS09040 892c93f64298fea74bdc808db8e92669 550 Gene3D G3DSA:3.30.450.20 217 323 5.3E-10 T 25-04-2016 SMA_RS09040 892c93f64298fea74bdc808db8e92669 550 SUPERFAMILY SSF47384 318 396 9.42E-18 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMA_RS09040 892c93f64298fea74bdc808db8e92669 550 PANTHER PTHR24423 209 548 1.9E-82 T 25-04-2016 SMA_RS09040 892c93f64298fea74bdc808db8e92669 550 PANTHER PTHR24423 38 150 1.9E-82 T 25-04-2016 SMA_RS09040 892c93f64298fea74bdc808db8e92669 550 SUPERFAMILY SSF55785 210 310 1.92E-7 T 25-04-2016 IPR000014 PAS domain SMA_RS09040 892c93f64298fea74bdc808db8e92669 550 Gene3D G3DSA:3.30.565.10 383 548 1.1E-43 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMA_RS09040 892c93f64298fea74bdc808db8e92669 550 SUPERFAMILY SSF55874 392 548 4.58E-40 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMA_RS09040 892c93f64298fea74bdc808db8e92669 550 Gene3D G3DSA:3.30.450.20 33 126 6.4E-10 T 25-04-2016 SMA_RS09040 892c93f64298fea74bdc808db8e92669 550 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 445 548 1.8E-23 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMA_RS09040 892c93f64298fea74bdc808db8e92669 550 SMART SM00387 440 550 2.9E-30 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMA_RS09040 892c93f64298fea74bdc808db8e92669 550 SMART SM00388 331 397 6.1E-17 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMA_RS04685 5eeb9e44d281b346b4d2b572055f3bdd 317 Gene3D G3DSA:3.30.420.10 185 314 1.1E-10 T 25-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMA_RS04685 5eeb9e44d281b346b4d2b572055f3bdd 317 PANTHER PTHR10948 4 312 2.1E-74 T 25-04-2016 SMA_RS04685 5eeb9e44d281b346b4d2b572055f3bdd 317 Pfam PF13936 Helix-turn-helix domain 8 51 1.8E-14 T 25-04-2016 IPR025246 Transposase IS30-like HTH domain SMA_RS04685 5eeb9e44d281b346b4d2b572055f3bdd 317 Gene3D G3DSA:1.10.10.60 7 46 3.0E-5 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMA_RS04685 5eeb9e44d281b346b4d2b572055f3bdd 317 SUPERFAMILY SSF53098 177 314 5.61E-19 T 25-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMA_RS04355 0af365f4ab4e4589eb5624bf6ad409b6 302 Gene3D G3DSA:3.40.190.10 185 266 2.4E-6 T 25-04-2016 SMA_RS04355 0af365f4ab4e4589eb5624bf6ad409b6 302 SUPERFAMILY SSF53850 115 297 1.43E-21 T 25-04-2016 SMA_RS04355 0af365f4ab4e4589eb5624bf6ad409b6 302 SUPERFAMILY SSF46785 1 82 1.12E-20 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMA_RS04355 0af365f4ab4e4589eb5624bf6ad409b6 302 PANTHER PTHR30346:SF0 1 298 1.9E-75 T 25-04-2016 SMA_RS04355 0af365f4ab4e4589eb5624bf6ad409b6 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 7.5E-18 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMA_RS04355 0af365f4ab4e4589eb5624bf6ad409b6 302 Gene3D G3DSA:1.10.10.10 1 80 3.3E-25 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMA_RS04355 0af365f4ab4e4589eb5624bf6ad409b6 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 7.3E-8 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMA_RS04355 0af365f4ab4e4589eb5624bf6ad409b6 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 7.3E-8 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMA_RS04355 0af365f4ab4e4589eb5624bf6ad409b6 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 7.3E-8 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMA_RS04355 0af365f4ab4e4589eb5624bf6ad409b6 302 Gene3D G3DSA:3.40.190.10 117 184 1.2E-4 T 25-04-2016 SMA_RS04355 0af365f4ab4e4589eb5624bf6ad409b6 302 PANTHER PTHR30346 1 298 1.9E-75 T 25-04-2016 SMA_RS04355 0af365f4ab4e4589eb5624bf6ad409b6 302 Pfam PF03466 LysR substrate binding domain 119 298 3.3E-10 T 25-04-2016 IPR005119 LysR, substrate-binding SMA_RS00825 555cfcb6b25fd3ec15ec9397af034756 75 Gene3D G3DSA:3.30.110.40 4 74 1.2E-19 T 25-04-2016 IPR001455 TusA-like domain SMA_RS00825 555cfcb6b25fd3ec15ec9397af034756 75 Pfam PF01206 Sulfurtransferase TusA 5 74 5.9E-17 T 25-04-2016 IPR001455 TusA-like domain SMA_RS00825 555cfcb6b25fd3ec15ec9397af034756 75 PANTHER PTHR33279:SF4 5 74 1.9E-33 T 25-04-2016 SMA_RS00825 555cfcb6b25fd3ec15ec9397af034756 75 PANTHER PTHR33279 5 74 1.9E-33 T 25-04-2016 SMA_RS00825 555cfcb6b25fd3ec15ec9397af034756 75 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 6 30 - T 25-04-2016 IPR001455 TusA-like domain SMA_RS00825 555cfcb6b25fd3ec15ec9397af034756 75 SUPERFAMILY SSF64307 4 74 2.22E-18 T 25-04-2016 IPR001455 TusA-like domain SMA_RS01950 032c27a2b83373c46d71f2fc327f942f 472 PANTHER PTHR30508:SF1 17 472 9.9E-233 T 25-04-2016 SMA_RS01950 032c27a2b83373c46d71f2fc327f942f 472 PANTHER PTHR30508 17 472 9.9E-233 T 25-04-2016 SMA_RS01950 032c27a2b83373c46d71f2fc327f942f 472 Pfam PF01458 Uncharacterized protein family (UPF0051) 218 443 7.1E-76 T 25-04-2016 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 SMA_RS01950 032c27a2b83373c46d71f2fc327f942f 472 SUPERFAMILY SSF101960 40 469 7.72E-139 T 25-04-2016 SMA_RS01950 032c27a2b83373c46d71f2fc327f942f 472 TIGRFAM TIGR01980 sufB: FeS assembly protein SufB 17 463 2.9E-220 T 25-04-2016 IPR010231 SUF system FeS cluster assembly, SufB GO:0016226 SMA_RS08480 d57073762f462ef96244037ec87eb56a 300 PANTHER PTHR10120:SF19 16 300 1.2E-89 T 25-04-2016 SMA_RS08480 d57073762f462ef96244037ec87eb56a 300 Hamap MF_00188 Protease HtpX [htpX]. 10 300 26.892 T 25-04-2016 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 SMA_RS08480 d57073762f462ef96244037ec87eb56a 300 PANTHER PTHR10120 16 300 1.2E-89 T 25-04-2016 SMA_RS08480 d57073762f462ef96244037ec87eb56a 300 Pfam PF01435 Peptidase family M48 78 299 4.0E-36 T 25-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 SMA_RS08480 d57073762f462ef96244037ec87eb56a 300 Gene3D G3DSA:3.30.2010.10 69 159 5.6E-33 T 25-04-2016 SMA_RS01830 556b47e3aa21e0f49dcbb5ccd5f9aca9 395 Pfam PF00571 CBS domain 314 366 4.4E-10 T 25-04-2016 IPR000644 CBS domain SMA_RS01830 556b47e3aa21e0f49dcbb5ccd5f9aca9 395 Pfam PF00571 CBS domain 254 304 1.6E-5 T 25-04-2016 IPR000644 CBS domain SMA_RS01830 556b47e3aa21e0f49dcbb5ccd5f9aca9 395 Pfam PF00005 ABC transporter 22 166 1.5E-32 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMA_RS01830 556b47e3aa21e0f49dcbb5ccd5f9aca9 395 SMART SM00382 30 216 4.6E-19 T 25-04-2016 IPR003593 AAA+ ATPase domain SMA_RS01830 556b47e3aa21e0f49dcbb5ccd5f9aca9 395 PANTHER PTHR24220:SF350 6 394 2.2E-178 T 25-04-2016 SMA_RS01830 556b47e3aa21e0f49dcbb5ccd5f9aca9 395 PANTHER PTHR24220 6 394 2.2E-178 T 25-04-2016 SMA_RS01830 556b47e3aa21e0f49dcbb5ccd5f9aca9 395 Gene3D G3DSA:3.10.580.10 252 369 1.1E-24 T 25-04-2016 SMA_RS01830 556b47e3aa21e0f49dcbb5ccd5f9aca9 395 SMART SM00116 261 309 4.7E-5 T 25-04-2016 IPR000644 CBS domain SMA_RS01830 556b47e3aa21e0f49dcbb5ccd5f9aca9 395 SMART SM00116 321 369 1.8E-7 T 25-04-2016 IPR000644 CBS domain SMA_RS01830 556b47e3aa21e0f49dcbb5ccd5f9aca9 395 Gene3D G3DSA:3.40.50.300 3 241 4.1E-78 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS01830 556b47e3aa21e0f49dcbb5ccd5f9aca9 395 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SMA_RS01830 556b47e3aa21e0f49dcbb5ccd5f9aca9 395 TIGRFAM TIGR01186 proV: glycine betaine/L-proline transport ATP binding subunit 16 373 1.3E-137 T 25-04-2016 IPR005892 Glycine betaine transport ATP-binding subunit GO:0005524|GO:0016020|GO:0031460 SMA_RS01830 556b47e3aa21e0f49dcbb5ccd5f9aca9 395 SUPERFAMILY SSF52540 4 240 5.19E-74 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS01830 556b47e3aa21e0f49dcbb5ccd5f9aca9 395 SUPERFAMILY SSF54631 253 379 3.54E-26 T 25-04-2016 SMA_RS08645 5a0d5e65b2a224203ffc7fee55e61731 175 Gene3D G3DSA:3.40.50.1000 17 158 2.4E-26 T 25-04-2016 IPR023214 HAD-like domain SMA_RS08645 5a0d5e65b2a224203ffc7fee55e61731 175 SUPERFAMILY SSF56784 9 153 3.15E-26 T 25-04-2016 IPR023214 HAD-like domain SMA_RS08645 5a0d5e65b2a224203ffc7fee55e61731 175 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 30 139 2.9E-16 T 25-04-2016 IPR006549 HAD-superfamily hydrolase,subfamily IIIA SMA_RS08645 5a0d5e65b2a224203ffc7fee55e61731 175 TIGRFAM TIGR01668 YqeG_hyp_ppase: HAD phosphatase, family IIIA 7 170 6.0E-35 T 25-04-2016 IPR010021 HAD-superfamily phosphatase, YqeG-like SMA_RS08645 5a0d5e65b2a224203ffc7fee55e61731 175 Pfam PF13419 Haloacid dehalogenase-like hydrolase 49 137 3.1E-11 T 25-04-2016 IPR023214 HAD-like domain SMA_RS08645 5a0d5e65b2a224203ffc7fee55e61731 175 PANTHER PTHR19288:SF25 7 159 4.7E-29 T 25-04-2016 SMA_RS08645 5a0d5e65b2a224203ffc7fee55e61731 175 PANTHER PTHR19288 7 159 4.7E-29 T 25-04-2016 SMA_RS02025 e2d31632d4a2903b859f4bbfd70b4af1 262 SUPERFAMILY SSF52096 9 261 2.82E-68 T 25-04-2016 IPR029045 ClpP/crotonase-like domain SMA_RS02025 e2d31632d4a2903b859f4bbfd70b4af1 262 Pfam PF00378 Enoyl-CoA hydratase/isomerase 10 261 5.9E-50 T 25-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 SMA_RS02025 e2d31632d4a2903b859f4bbfd70b4af1 262 Gene3D G3DSA:3.90.226.10 7 260 9.9E-68 T 25-04-2016 IPR029045 ClpP/crotonase-like domain SMA_RS02025 e2d31632d4a2903b859f4bbfd70b4af1 262 PANTHER PTHR11941:SF76 11 259 2.2E-86 T 25-04-2016 SMA_RS02025 e2d31632d4a2903b859f4bbfd70b4af1 262 PANTHER PTHR11941 11 259 2.2E-86 T 25-04-2016 SMA_RS02760 28cd2f0a028e52f4144720fc3d7170d3 105 Gene3D G3DSA:1.10.150.20 51 98 1.5E-7 T 25-04-2016 SMA_RS02760 28cd2f0a028e52f4144720fc3d7170d3 105 Pfam PF14520 Helix-hairpin-helix domain 48 98 2.3E-8 T 25-04-2016 SMA_RS02760 28cd2f0a028e52f4144720fc3d7170d3 105 SUPERFAMILY SSF47794 51 99 6.12E-8 T 25-04-2016 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 SMA_RS06860 8014e4ae5430bdb3b1695b3c7a8bd98b 198 PANTHER PTHR26402 1 197 5.5E-38 T 25-04-2016 SMA_RS06860 8014e4ae5430bdb3b1695b3c7a8bd98b 198 Pfam PF00196 Bacterial regulatory proteins, luxR family 136 190 6.6E-15 T 25-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SMA_RS06860 8014e4ae5430bdb3b1695b3c7a8bd98b 198 SUPERFAMILY SSF52172 1 149 1.49E-19 T 25-04-2016 IPR011006 CheY-like superfamily SMA_RS06860 8014e4ae5430bdb3b1695b3c7a8bd98b 198 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 137 151 1.2E-12 T 25-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SMA_RS06860 8014e4ae5430bdb3b1695b3c7a8bd98b 198 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 167 179 1.2E-12 T 25-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SMA_RS06860 8014e4ae5430bdb3b1695b3c7a8bd98b 198 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 151 167 1.2E-12 T 25-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SMA_RS06860 8014e4ae5430bdb3b1695b3c7a8bd98b 198 SUPERFAMILY SSF46894 135 197 3.61E-15 T 25-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SMA_RS06860 8014e4ae5430bdb3b1695b3c7a8bd98b 198 Pfam PF00072 Response regulator receiver domain 3 117 3.4E-14 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMA_RS06860 8014e4ae5430bdb3b1695b3c7a8bd98b 198 SMART SM00421 134 191 2.2E-13 T 25-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SMA_RS06860 8014e4ae5430bdb3b1695b3c7a8bd98b 198 Gene3D G3DSA:3.40.50.2300 2 140 4.1E-23 T 25-04-2016 SMA_RS06860 8014e4ae5430bdb3b1695b3c7a8bd98b 198 Gene3D G3DSA:1.10.10.10 141 196 2.5E-20 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMA_RS06860 8014e4ae5430bdb3b1695b3c7a8bd98b 198 SMART SM00448 1 117 1.9E-12 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMA_RS07445 07edec1f004757dc85ad9df8fd0f62d7 599 PANTHER PTHR11804:SF45 13 597 1.9E-242 T 25-04-2016 SMA_RS07445 07edec1f004757dc85ad9df8fd0f62d7 599 Pfam PF08439 Oligopeptidase F 124 176 2.0E-5 T 25-04-2016 IPR013647 Oligopeptidase F, N-terminal domain SMA_RS07445 07edec1f004757dc85ad9df8fd0f62d7 599 Gene3D G3DSA:3.40.390.10 376 420 4.2E-7 T 25-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 SMA_RS07445 07edec1f004757dc85ad9df8fd0f62d7 599 TIGRFAM TIGR00181 pepF: oligoendopeptidase F 6 590 1.1E-191 T 25-04-2016 IPR004438 Peptidase M3B, oligoendopeptidase F GO:0004222|GO:0006508 SMA_RS07445 07edec1f004757dc85ad9df8fd0f62d7 599 SUPERFAMILY SSF55486 4 576 1.05E-88 T 25-04-2016 SMA_RS07445 07edec1f004757dc85ad9df8fd0f62d7 599 PANTHER PTHR11804 13 597 1.9E-242 T 25-04-2016 SMA_RS07445 07edec1f004757dc85ad9df8fd0f62d7 599 Pfam PF01432 Peptidase family M3 199 579 1.7E-38 T 25-04-2016 IPR001567 Peptidase M3A/M3B GO:0004222|GO:0006508 SMA_RS02160 a6c809fc43757bd4e2e7354761eb3741 241 Pfam PF00005 ABC transporter 17 160 8.4E-30 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMA_RS02160 a6c809fc43757bd4e2e7354761eb3741 241 Gene3D G3DSA:3.40.50.300 1 228 7.3E-62 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS02160 a6c809fc43757bd4e2e7354761eb3741 241 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SMA_RS02160 a6c809fc43757bd4e2e7354761eb3741 241 PANTHER PTHR24220:SF160 3 223 9.6E-83 T 25-04-2016 SMA_RS02160 a6c809fc43757bd4e2e7354761eb3741 241 SUPERFAMILY SSF52540 2 223 3.7E-59 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS02160 a6c809fc43757bd4e2e7354761eb3741 241 SMART SM00382 26 211 3.9E-10 T 25-04-2016 IPR003593 AAA+ ATPase domain SMA_RS02160 a6c809fc43757bd4e2e7354761eb3741 241 PANTHER PTHR24220 3 223 9.6E-83 T 25-04-2016 SMA_RS01925 0238937d902d5ee073133fb611cdafce 387 PANTHER PTHR22926:SF3 5 374 3.8E-87 T 25-04-2016 SMA_RS01925 0238937d902d5ee073133fb611cdafce 387 Pfam PF00953 Glycosyl transferase family 4 89 246 1.2E-37 T 25-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 SMA_RS01925 0238937d902d5ee073133fb611cdafce 387 PANTHER PTHR22926 5 374 3.8E-87 T 25-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 SMA_RS01925 0238937d902d5ee073133fb611cdafce 387 ProSitePatterns PS01348 MraY family signature 2. 164 175 - T 25-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 SMA_RS10035 baaf37d2a9f379a494bfff8942c45324 325 Gene3D G3DSA:3.20.20.70 14 253 7.6E-82 T 25-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SMA_RS10035 baaf37d2a9f379a494bfff8942c45324 325 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 10 323 3.8E-106 T 25-04-2016 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 SMA_RS10035 baaf37d2a9f379a494bfff8942c45324 325 Gene3D G3DSA:1.10.1200.80 262 324 5.1E-20 T 25-04-2016 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 SMA_RS10035 baaf37d2a9f379a494bfff8942c45324 325 Pfam PF01207 Dihydrouridine synthase (Dus) 20 319 4.9E-88 T 25-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 SMA_RS10035 baaf37d2a9f379a494bfff8942c45324 325 PANTHER PTHR11082 1 325 8.5E-136 T 25-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 SMA_RS10035 baaf37d2a9f379a494bfff8942c45324 325 PANTHER PTHR11082:SF25 1 325 8.5E-136 T 25-04-2016 SMA_RS10035 baaf37d2a9f379a494bfff8942c45324 325 PIRSF PIRSF006621 7 325 1.4E-102 T 25-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 SMA_RS10035 baaf37d2a9f379a494bfff8942c45324 325 SUPERFAMILY SSF51395 17 323 3.85E-83 T 25-04-2016 SMA_RS10035 baaf37d2a9f379a494bfff8942c45324 325 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 102 120 - T 25-04-2016 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 SMA_RS00645 21fd8a08e322f32aebfb4334a6a6f1a7 282 PIRSF PIRSF010376 1 282 2.5E-89 T 25-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 SMA_RS00645 21fd8a08e322f32aebfb4334a6a6f1a7 282 PANTHER PTHR20861:SF2 1 277 6.5E-85 T 25-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 SMA_RS00645 21fd8a08e322f32aebfb4334a6a6f1a7 282 Gene3D G3DSA:3.30.230.10 5 157 5.6E-49 T 25-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SMA_RS00645 21fd8a08e322f32aebfb4334a6a6f1a7 282 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 1 281 1.6E-77 T 25-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 SMA_RS00645 21fd8a08e322f32aebfb4334a6a6f1a7 282 SUPERFAMILY SSF55060 164 280 3.6E-29 T 25-04-2016 IPR013750 GHMP kinase, C-terminal domain SMA_RS00645 21fd8a08e322f32aebfb4334a6a6f1a7 282 Gene3D G3DSA:3.30.70.890 164 281 1.1E-30 T 25-04-2016 IPR013750 GHMP kinase, C-terminal domain SMA_RS00645 21fd8a08e322f32aebfb4334a6a6f1a7 282 Pfam PF00288 GHMP kinases N terminal domain 86 141 3.0E-9 T 25-04-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 SMA_RS00645 21fd8a08e322f32aebfb4334a6a6f1a7 282 Hamap MF_00061 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 3 279 32.819 T 25-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 SMA_RS00645 21fd8a08e322f32aebfb4334a6a6f1a7 282 Pfam PF08544 GHMP kinases C terminal 197 273 2.1E-9 T 25-04-2016 IPR013750 GHMP kinase, C-terminal domain SMA_RS00645 21fd8a08e322f32aebfb4334a6a6f1a7 282 SUPERFAMILY SSF54211 1 156 1.9E-44 T 25-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SMA_RS00645 21fd8a08e322f32aebfb4334a6a6f1a7 282 PANTHER PTHR20861 1 277 6.5E-85 T 25-04-2016 SMA_RS07555 73dee8a336220725903bc4f70c283a62 313 Pfam PF02603 HPr Serine kinase N terminus 7 131 7.5E-40 T 25-04-2016 IPR011126 HPr(Ser) kinase/phosphorylase, N-terminal GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 SMA_RS07555 73dee8a336220725903bc4f70c283a62 313 Gene3D G3DSA:3.40.50.300 137 310 6.5E-70 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS07555 73dee8a336220725903bc4f70c283a62 313 Hamap MF_01249 HPr kinase/phosphorylase [hprK]. 6 310 40.697 T 25-04-2016 IPR003755 HPr(Ser) kinase/phosphorylase GO:0000155|GO:0000160|GO:0005524|GO:0006109 SMA_RS07555 73dee8a336220725903bc4f70c283a62 313 Gene3D G3DSA:3.40.1390.20 6 134 6.0E-46 T 25-04-2016 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like SMA_RS07555 73dee8a336220725903bc4f70c283a62 313 PANTHER PTHR30305 1 313 7.2E-132 T 25-04-2016 SMA_RS07555 73dee8a336220725903bc4f70c283a62 313 PANTHER PTHR30305:SF1 1 313 7.2E-132 T 25-04-2016 SMA_RS07555 73dee8a336220725903bc4f70c283a62 313 SUPERFAMILY SSF53795 136 302 2.08E-37 T 25-04-2016 SMA_RS07555 73dee8a336220725903bc4f70c283a62 313 TIGRFAM TIGR00679 hpr-ser: HPr(Ser) kinase/phosphatase 7 306 2.8E-108 T 25-04-2016 IPR003755 HPr(Ser) kinase/phosphorylase GO:0000155|GO:0000160|GO:0005524|GO:0006109 SMA_RS07555 73dee8a336220725903bc4f70c283a62 313 SUPERFAMILY SSF75138 6 135 1.83E-39 T 25-04-2016 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like SMA_RS07555 73dee8a336220725903bc4f70c283a62 313 Pfam PF07475 HPr Serine kinase C-terminal domain 135 302 4.0E-72 T 25-04-2016 IPR011104 HPr kinase/phosphorylase, C-terminal GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 SMA_RS03415 61529f3b83f6c10f4f815b5c05a7dc68 376 PANTHER PTHR11986 6 376 4.1E-163 T 25-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 SMA_RS03415 61529f3b83f6c10f4f815b5c05a7dc68 376 Gene3D G3DSA:3.90.1150.10 270 375 9.2E-33 T 25-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SMA_RS03415 61529f3b83f6c10f4f815b5c05a7dc68 376 Pfam PF00202 Aminotransferase class-III 11 374 2.7E-108 T 25-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 SMA_RS03415 61529f3b83f6c10f4f815b5c05a7dc68 376 SUPERFAMILY SSF53383 3 375 9.43E-115 T 25-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SMA_RS03415 61529f3b83f6c10f4f815b5c05a7dc68 376 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 1 376 42.86 T 25-04-2016 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 SMA_RS03415 61529f3b83f6c10f4f815b5c05a7dc68 376 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 5 375 2.1E-140 T 25-04-2016 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 SMA_RS03415 61529f3b83f6c10f4f815b5c05a7dc68 376 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 202 239 - T 25-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 SMA_RS03415 61529f3b83f6c10f4f815b5c05a7dc68 376 PANTHER PTHR11986:SF79 6 376 4.1E-163 T 25-04-2016 SMA_RS03415 61529f3b83f6c10f4f815b5c05a7dc68 376 Gene3D G3DSA:3.40.640.10 46 269 3.7E-82 T 25-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SMA_RS01525 ce2def1ddb9635ae10d97647f4902c91 703 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 114 695 1.4E-189 T 25-04-2016 SMA_RS01525 ce2def1ddb9635ae10d97647f4902c91 703 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 171 666 2.1E-79 T 25-04-2016 IPR001757 P-type ATPase GO:0016021 SMA_RS01525 ce2def1ddb9635ae10d97647f4902c91 703 SUPERFAMILY SSF56784 456 693 1.06E-50 T 25-04-2016 IPR023214 HAD-like domain SMA_RS01525 ce2def1ddb9635ae10d97647f4902c91 703 SUPERFAMILY SSF56784 398 416 1.06E-50 T 25-04-2016 IPR023214 HAD-like domain SMA_RS01525 ce2def1ddb9635ae10d97647f4902c91 703 Pfam PF00702 haloacid dehalogenase-like hydrolase 395 601 1.4E-33 T 25-04-2016 SMA_RS01525 ce2def1ddb9635ae10d97647f4902c91 703 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 152 695 9.0E-109 T 25-04-2016 SMA_RS01525 ce2def1ddb9635ae10d97647f4902c91 703 Gene3D G3DSA:3.40.50.1000 372 414 1.3E-43 T 25-04-2016 IPR023214 HAD-like domain SMA_RS01525 ce2def1ddb9635ae10d97647f4902c91 703 Gene3D G3DSA:3.40.50.1000 516 655 1.3E-43 T 25-04-2016 IPR023214 HAD-like domain SMA_RS01525 ce2def1ddb9635ae10d97647f4902c91 703 SUPERFAMILY SSF81653 205 299 5.1E-23 T 25-04-2016 SMA_RS01525 ce2def1ddb9635ae10d97647f4902c91 703 Gene3D G3DSA:3.40.1110.10 420 515 1.4E-5 T 25-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 SMA_RS01525 ce2def1ddb9635ae10d97647f4902c91 703 Pfam PF00122 E1-E2 ATPase 171 389 1.0E-55 T 25-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 SMA_RS01525 ce2def1ddb9635ae10d97647f4902c91 703 SUPERFAMILY SSF81665 149 202 9.42E-13 T 25-04-2016 SMA_RS01525 ce2def1ddb9635ae10d97647f4902c91 703 SUPERFAMILY SSF81665 300 390 9.42E-13 T 25-04-2016 SMA_RS01525 ce2def1ddb9635ae10d97647f4902c91 703 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 587 606 3.4E-22 T 25-04-2016 SMA_RS01525 ce2def1ddb9635ae10d97647f4902c91 703 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 610 622 3.4E-22 T 25-04-2016 SMA_RS01525 ce2def1ddb9635ae10d97647f4902c91 703 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 249 263 3.4E-22 T 25-04-2016 SMA_RS01525 ce2def1ddb9635ae10d97647f4902c91 703 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 535 545 3.4E-22 T 25-04-2016 SMA_RS01525 ce2def1ddb9635ae10d97647f4902c91 703 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 398 412 3.4E-22 T 25-04-2016 SMA_RS01525 ce2def1ddb9635ae10d97647f4902c91 703 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 400 406 - T 25-04-2016 IPR018303 P-type ATPase, phosphorylation site SMA_RS01525 ce2def1ddb9635ae10d97647f4902c91 703 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 132 695 3.6E-165 T 25-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 SMA_RS01525 ce2def1ddb9635ae10d97647f4902c91 703 Gene3D G3DSA:2.70.150.10 143 300 3.6E-27 T 25-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 SMA_RS01525 ce2def1ddb9635ae10d97647f4902c91 703 PRINTS PR00943 Copper-transporting ATPase signature 564 581 1.2E-14 T 25-04-2016 SMA_RS01525 ce2def1ddb9635ae10d97647f4902c91 703 PRINTS PR00943 Copper-transporting ATPase signature 117 136 1.2E-14 T 25-04-2016 SMA_RS01525 ce2def1ddb9635ae10d97647f4902c91 703 PRINTS PR00943 Copper-transporting ATPase signature 381 396 1.2E-14 T 25-04-2016 SMA_RS01525 ce2def1ddb9635ae10d97647f4902c91 703 PRINTS PR00943 Copper-transporting ATPase signature 660 674 1.2E-14 T 25-04-2016 SMA_RS01525 ce2def1ddb9635ae10d97647f4902c91 703 PRINTS PR00943 Copper-transporting ATPase signature 97 115 1.2E-14 T 25-04-2016 SMA_RS01525 ce2def1ddb9635ae10d97647f4902c91 703 PRINTS PR00943 Copper-transporting ATPase signature 322 336 1.2E-14 T 25-04-2016 SMA_RS01525 ce2def1ddb9635ae10d97647f4902c91 703 PRINTS PR00943 Copper-transporting ATPase signature 188 206 1.2E-14 T 25-04-2016 SMA_RS01525 ce2def1ddb9635ae10d97647f4902c91 703 PANTHER PTHR24093:SF332 1 695 1.8E-202 T 25-04-2016 SMA_RS01525 ce2def1ddb9635ae10d97647f4902c91 703 PANTHER PTHR24093 1 695 1.8E-202 T 25-04-2016 SMA_RS08160 45eb96da63fb7f9846dca93bd9ae6fe1 340 PANTHER PTHR30472 12 340 1.0E-98 T 25-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 SMA_RS08160 45eb96da63fb7f9846dca93bd9ae6fe1 340 Pfam PF01032 FecCD transport family 26 336 4.0E-86 T 25-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 SMA_RS08160 45eb96da63fb7f9846dca93bd9ae6fe1 340 Gene3D G3DSA:1.10.3470.10 10 338 3.7E-92 T 25-04-2016 IPR029022 ABC transporter, BtuC-like SMA_RS08160 45eb96da63fb7f9846dca93bd9ae6fe1 340 SUPERFAMILY SSF81345 10 336 1.06E-78 T 25-04-2016 IPR029022 ABC transporter, BtuC-like SMA_RS04055 a90448e2d4b83f405530e00ea838ffa5 237 PRINTS PR00138 Matrixin signature 113 128 6.0E-5 T 25-04-2016 IPR021190 Peptidase M10A GO:0004222|GO:0006508|GO:0008270|GO:0031012 SMA_RS04055 a90448e2d4b83f405530e00ea838ffa5 237 PRINTS PR00138 Matrixin signature 193 218 6.0E-5 T 25-04-2016 IPR021190 Peptidase M10A GO:0004222|GO:0006508|GO:0008270|GO:0031012 SMA_RS04055 a90448e2d4b83f405530e00ea838ffa5 237 SUPERFAMILY SSF55486 86 235 7.34E-26 T 25-04-2016 SMA_RS04055 a90448e2d4b83f405530e00ea838ffa5 237 Gene3D G3DSA:3.40.390.10 87 236 1.5E-21 T 25-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 SMA_RS04055 a90448e2d4b83f405530e00ea838ffa5 237 Pfam PF00413 Matrixin 105 236 5.9E-9 T 25-04-2016 IPR001818 Peptidase M10, metallopeptidase GO:0004222|GO:0006508|GO:0008270|GO:0031012 SMA_RS04055 a90448e2d4b83f405530e00ea838ffa5 237 SMART SM00235 89 237 0.0024 T 25-04-2016 IPR006026 Peptidase, metallopeptidase GO:0006508|GO:0008237|GO:0008270 SMA_RS07160 bb31d610776e7985d94ecb2264a7eb6c 1070 PANTHER PTHR10357:SF99 555 665 1.2E-121 T 25-04-2016 SMA_RS07160 bb31d610776e7985d94ecb2264a7eb6c 1070 SUPERFAMILY SSF81296 152 259 4.6E-17 T 25-04-2016 IPR014756 Immunoglobulin E-set SMA_RS07160 bb31d610776e7985d94ecb2264a7eb6c 1070 TIGRFAM TIGR01167 LPXTG_anchor: LPXTG cell wall anchor domain 1035 1068 3.6E-5 T 25-04-2016 IPR019931 LPXTG cell wall anchor domain SMA_RS07160 bb31d610776e7985d94ecb2264a7eb6c 1070 PANTHER PTHR10357 696 846 1.2E-121 T 25-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 SMA_RS07160 bb31d610776e7985d94ecb2264a7eb6c 1070 PANTHER PTHR10357 148 533 1.2E-121 T 25-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 SMA_RS07160 bb31d610776e7985d94ecb2264a7eb6c 1070 TIGRFAM TIGR02102 pullulan_Gpos: pullulanase, extracellular 5 893 0.0 T 25-04-2016 IPR011838 Pullulanase, extracellular SMA_RS07160 bb31d610776e7985d94ecb2264a7eb6c 1070 PANTHER PTHR10357:SF99 696 846 1.2E-121 T 25-04-2016 SMA_RS07160 bb31d610776e7985d94ecb2264a7eb6c 1070 PANTHER PTHR10357:SF99 148 533 1.2E-121 T 25-04-2016 SMA_RS07160 bb31d610776e7985d94ecb2264a7eb6c 1070 SMART SM00642 298 712 1.7E-8 T 25-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 SMA_RS07160 bb31d610776e7985d94ecb2264a7eb6c 1070 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 157 245 1.1E-10 T 25-04-2016 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 SMA_RS07160 bb31d610776e7985d94ecb2264a7eb6c 1070 Pfam PF00128 Alpha amylase, catalytic domain 462 656 7.8E-8 T 25-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 SMA_RS07160 bb31d610776e7985d94ecb2264a7eb6c 1070 Pfam PF00128 Alpha amylase, catalytic domain 324 425 1.7E-14 T 25-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 SMA_RS07160 bb31d610776e7985d94ecb2264a7eb6c 1070 Gene3D G3DSA:3.20.20.80 298 422 4.9E-103 T 25-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 SMA_RS07160 bb31d610776e7985d94ecb2264a7eb6c 1070 Gene3D G3DSA:3.20.20.80 459 741 4.9E-103 T 25-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 SMA_RS07160 bb31d610776e7985d94ecb2264a7eb6c 1070 PANTHER PTHR10357 555 665 1.2E-121 T 25-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 SMA_RS07160 bb31d610776e7985d94ecb2264a7eb6c 1070 Gene3D G3DSA:2.60.40.10 156 297 1.3E-16 T 25-04-2016 IPR013783 Immunoglobulin-like fold SMA_RS07160 bb31d610776e7985d94ecb2264a7eb6c 1070 SUPERFAMILY SSF51445 289 741 2.15E-100 T 25-04-2016 IPR017853 Glycoside hydrolase superfamily SMA_RS07160 bb31d610776e7985d94ecb2264a7eb6c 1070 SUPERFAMILY SSF49452 5 56 4.71E-6 T 25-04-2016 IPR013784 Carbohydrate-binding-like fold GO:0030246 SMA_RS10555 ce6ae23a6f3c0f53f20e1ff8edf73a4a 397 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 361 397 9.5E-10 T 25-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 SMA_RS10555 ce6ae23a6f3c0f53f20e1ff8edf73a4a 397 SMART SM00382 144 277 1.7E-10 T 25-04-2016 IPR003593 AAA+ ATPase domain SMA_RS10555 ce6ae23a6f3c0f53f20e1ff8edf73a4a 397 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 145 165 1.8E-37 T 25-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like SMA_RS10555 ce6ae23a6f3c0f53f20e1ff8edf73a4a 397 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 177 191 1.8E-37 T 25-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like SMA_RS10555 ce6ae23a6f3c0f53f20e1ff8edf73a4a 397 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 209 223 1.8E-37 T 25-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like SMA_RS10555 ce6ae23a6f3c0f53f20e1ff8edf73a4a 397 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 245 272 1.8E-37 T 25-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like SMA_RS10555 ce6ae23a6f3c0f53f20e1ff8edf73a4a 397 PANTHER PTHR30050:SF2 4 397 4.4E-143 T 25-04-2016 SMA_RS10555 ce6ae23a6f3c0f53f20e1ff8edf73a4a 397 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 6 397 22.931 T 25-04-2016 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 SMA_RS10555 ce6ae23a6f3c0f53f20e1ff8edf73a4a 397 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 9 397 2.1E-130 T 25-04-2016 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 SMA_RS10555 ce6ae23a6f3c0f53f20e1ff8edf73a4a 397 Gene3D G3DSA:1.10.8.60 280 347 1.4E-20 T 25-04-2016 SMA_RS10555 ce6ae23a6f3c0f53f20e1ff8edf73a4a 397 SUPERFAMILY SSF52540 111 325 5.04E-44 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS10555 ce6ae23a6f3c0f53f20e1ff8edf73a4a 397 SUPERFAMILY SSF48295 358 397 1.6E-9 T 25-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 SMA_RS10555 ce6ae23a6f3c0f53f20e1ff8edf73a4a 397 Gene3D G3DSA:3.40.50.300 105 278 4.8E-59 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS10555 ce6ae23a6f3c0f53f20e1ff8edf73a4a 397 Gene3D G3DSA:1.10.1750.10 356 397 3.1E-11 T 25-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 SMA_RS10555 ce6ae23a6f3c0f53f20e1ff8edf73a4a 397 Pfam PF00308 Bacterial dnaA protein 112 330 1.4E-86 T 25-04-2016 IPR013317 Chromosomal replication initiator protein DnaA SMA_RS10555 ce6ae23a6f3c0f53f20e1ff8edf73a4a 397 PANTHER PTHR30050 4 397 4.4E-143 T 25-04-2016 SMA_RS10335 132996913e86fd07759521703467c696 90 PANTHER PTHR40026 6 90 9.9E-23 T 25-04-2016 SMA_RS10335 132996913e86fd07759521703467c696 90 PANTHER PTHR40026:SF1 6 90 9.9E-23 T 25-04-2016 IPR009366 Protein Veg GO:0042710 SMA_RS10335 132996913e86fd07759521703467c696 90 Gene3D G3DSA:2.30.30.100 1 90 6.3E-31 T 25-04-2016 SMA_RS10335 132996913e86fd07759521703467c696 90 Pfam PF06257 Biofilm formation stimulator VEG 10 86 9.8E-26 T 25-04-2016 IPR009366 Protein Veg GO:0042710 SMA_RS10335 132996913e86fd07759521703467c696 90 PIRSF PIRSF037257 1 90 6.0E-28 T 25-04-2016 IPR009366 Protein Veg GO:0042710 SMA_RS07935 9042f946b2e2b1135e313659b4e0e1fd 232 Pfam PF00106 short chain dehydrogenase 3 178 3.2E-43 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMA_RS07935 9042f946b2e2b1135e313659b4e0e1fd 232 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 124 152 - T 25-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 SMA_RS07935 9042f946b2e2b1135e313659b4e0e1fd 232 SUPERFAMILY SSF51735 3 231 1.17E-60 T 25-04-2016 IPR016040 NAD(P)-binding domain SMA_RS07935 9042f946b2e2b1135e313659b4e0e1fd 232 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 111 127 1.2E-35 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMA_RS07935 9042f946b2e2b1135e313659b4e0e1fd 232 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 175 1.2E-35 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMA_RS07935 9042f946b2e2b1135e313659b4e0e1fd 232 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 137 156 1.2E-35 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMA_RS07935 9042f946b2e2b1135e313659b4e0e1fd 232 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 63 74 1.2E-35 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMA_RS07935 9042f946b2e2b1135e313659b4e0e1fd 232 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 193 213 1.2E-35 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMA_RS07935 9042f946b2e2b1135e313659b4e0e1fd 232 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 1.2E-35 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMA_RS07935 9042f946b2e2b1135e313659b4e0e1fd 232 PANTHER PTHR24322 137 168 7.6E-42 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMA_RS07935 9042f946b2e2b1135e313659b4e0e1fd 232 PANTHER PTHR24322 6 121 7.6E-42 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMA_RS07935 9042f946b2e2b1135e313659b4e0e1fd 232 Gene3D G3DSA:3.40.50.720 4 231 5.7E-62 T 25-04-2016 IPR016040 NAD(P)-binding domain SMA_RS07935 9042f946b2e2b1135e313659b4e0e1fd 232 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 63 74 3.8E-11 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMA_RS07935 9042f946b2e2b1135e313659b4e0e1fd 232 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 137 156 3.8E-11 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMA_RS07935 9042f946b2e2b1135e313659b4e0e1fd 232 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 117 125 3.8E-11 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMA_RS03175 fda20a4cc98e5469001aa6eb5d0a65ee 278 PANTHER PTHR33434:SF1 1 276 9.4E-120 T 25-04-2016 SMA_RS03175 fda20a4cc98e5469001aa6eb5d0a65ee 278 Pfam PF02645 Uncharacterised protein, DegV family COG1307 3 277 2.7E-85 T 25-04-2016 IPR003797 DegV SMA_RS03175 fda20a4cc98e5469001aa6eb5d0a65ee 278 PANTHER PTHR33434 1 276 9.4E-120 T 25-04-2016 SMA_RS03175 fda20a4cc98e5469001aa6eb5d0a65ee 278 SUPERFAMILY SSF82549 1 277 8.37E-81 T 25-04-2016 SMA_RS03175 fda20a4cc98e5469001aa6eb5d0a65ee 278 TIGRFAM TIGR00762 DegV: EDD domain protein, DegV family 4 275 6.1E-90 T 25-04-2016 IPR003797 DegV SMA_RS03175 fda20a4cc98e5469001aa6eb5d0a65ee 278 Gene3D G3DSA:3.30.1180.10 156 277 3.8E-37 T 25-04-2016 SMA_RS03175 fda20a4cc98e5469001aa6eb5d0a65ee 278 Gene3D G3DSA:3.40.50.10170 3 151 3.7E-48 T 25-04-2016 SMA_RS01515 4aca21eb34278f1db556409d9f9836d9 158 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 63 82 1.11E-18 T 25-04-2016 SMA_RS01515 4aca21eb34278f1db556409d9f9836d9 158 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 86 98 1.11E-18 T 25-04-2016 SMA_RS01515 4aca21eb34278f1db556409d9f9836d9 158 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 10 20 1.11E-18 T 25-04-2016 SMA_RS01515 4aca21eb34278f1db556409d9f9836d9 158 PANTHER PTHR24093 2 143 8.7E-73 T 25-04-2016 SMA_RS01515 4aca21eb34278f1db556409d9f9836d9 158 Gene3D G3DSA:3.40.50.1000 2 131 1.2E-48 T 25-04-2016 IPR023214 HAD-like domain SMA_RS01515 4aca21eb34278f1db556409d9f9836d9 158 SUPERFAMILY SSF56784 2 143 3.37E-50 T 25-04-2016 IPR023214 HAD-like domain SMA_RS01515 4aca21eb34278f1db556409d9f9836d9 158 Pfam PF00702 haloacid dehalogenase-like hydrolase 2 77 1.8E-24 T 25-04-2016 SMA_RS01515 4aca21eb34278f1db556409d9f9836d9 158 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 94 119 1.75E-11 T 25-04-2016 IPR001757 P-type ATPase GO:0016021 SMA_RS01515 4aca21eb34278f1db556409d9f9836d9 158 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 35 51 1.75E-11 T 25-04-2016 IPR001757 P-type ATPase GO:0016021 SMA_RS01515 4aca21eb34278f1db556409d9f9836d9 158 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 63 79 1.75E-11 T 25-04-2016 IPR001757 P-type ATPase GO:0016021 SMA_RS01515 4aca21eb34278f1db556409d9f9836d9 158 PANTHER PTHR24093:SF50 2 143 8.7E-73 T 25-04-2016 SMA_RS01515 4aca21eb34278f1db556409d9f9836d9 158 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 2 143 2.8E-44 T 25-04-2016 IPR001757 P-type ATPase GO:0016021 SMA_RS04015 c6866c7a19f319bd3ee417a64a7a849a 517 SUPERFAMILY SSF161098 11 208 1.96E-41 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SMA_RS04015 c6866c7a19f319bd3ee417a64a7a849a 517 PANTHER PTHR30614 4 228 6.8E-78 T 25-04-2016 SMA_RS04015 c6866c7a19f319bd3ee417a64a7a849a 517 Gene3D G3DSA:1.10.3720.10 13 223 4.6E-46 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SMA_RS04015 c6866c7a19f319bd3ee417a64a7a849a 517 SUPERFAMILY SSF53850 248 506 6.64E-54 T 25-04-2016 SMA_RS04015 c6866c7a19f319bd3ee417a64a7a849a 517 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 287 506 8.5E-48 T 25-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SMA_RS04015 c6866c7a19f319bd3ee417a64a7a849a 517 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 33 223 8.3E-25 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SMA_RS04015 c6866c7a19f319bd3ee417a64a7a849a 517 SMART SM00062 286 510 7.9E-44 T 25-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SMA_RS04015 c6866c7a19f319bd3ee417a64a7a849a 517 Gene3D G3DSA:3.40.190.10 367 461 2.2E-17 T 25-04-2016 SMA_RS04015 c6866c7a19f319bd3ee417a64a7a849a 517 Gene3D G3DSA:3.40.190.10 282 366 1.7E-29 T 25-04-2016 SMA_RS04015 c6866c7a19f319bd3ee417a64a7a849a 517 Gene3D G3DSA:3.40.190.10 469 507 1.7E-29 T 25-04-2016 SMA_RS04015 c6866c7a19f319bd3ee417a64a7a849a 517 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 12 117 7.0E-22 T 25-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 SMA_RS02825 f35e600d4da20067a7865bba76a325c5 361 Gene3D G3DSA:2.30.42.10 145 216 1.2E-7 T 25-04-2016 IPR001478 PDZ domain GO:0005515 SMA_RS02825 f35e600d4da20067a7865bba76a325c5 361 PANTHER PTHR10046:SF48 222 309 5.8E-45 T 25-04-2016 SMA_RS02825 f35e600d4da20067a7865bba76a325c5 361 PANTHER PTHR10046:SF48 325 361 5.8E-45 T 25-04-2016 SMA_RS02825 f35e600d4da20067a7865bba76a325c5 361 Pfam PF13180 PDZ domain 144 208 1.5E-7 T 25-04-2016 IPR001478 PDZ domain GO:0005515 SMA_RS02825 f35e600d4da20067a7865bba76a325c5 361 Gene3D G3DSA:3.30.230.10 235 357 1.4E-22 T 25-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SMA_RS02825 f35e600d4da20067a7865bba76a325c5 361 PANTHER PTHR10046 222 309 5.8E-45 T 25-04-2016 IPR027065 Lon protease GO:0004176|GO:0004252|GO:0005524|GO:0030163 SMA_RS02825 f35e600d4da20067a7865bba76a325c5 361 PANTHER PTHR10046 325 361 5.8E-45 T 25-04-2016 IPR027065 Lon protease GO:0004176|GO:0004252|GO:0005524|GO:0030163 SMA_RS02825 f35e600d4da20067a7865bba76a325c5 361 SUPERFAMILY SSF50156 125 207 2.94E-7 T 25-04-2016 IPR001478 PDZ domain GO:0005515 SMA_RS02825 f35e600d4da20067a7865bba76a325c5 361 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 246 322 5.6E-6 T 25-04-2016 IPR008269 Peptidase S16, Lon C-terminal GO:0004176|GO:0004252|GO:0006508 SMA_RS02825 f35e600d4da20067a7865bba76a325c5 361 SUPERFAMILY SSF54211 194 358 8.34E-23 T 25-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SMA_RS08525 9d3f8c8e7d5072f392d8059576c87415 408 PANTHER PTHR11958:SF68 2 395 3.6E-197 T 25-04-2016 SMA_RS08525 9d3f8c8e7d5072f392d8059576c87415 408 SUPERFAMILY SSF118215 13 396 6.54E-97 T 25-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SMA_RS08525 9d3f8c8e7d5072f392d8059576c87415 408 PRINTS PR00173 Glutamate-aspartate symporter signature 183 202 6.7E-12 T 25-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SMA_RS08525 9d3f8c8e7d5072f392d8059576c87415 408 PRINTS PR00173 Glutamate-aspartate symporter signature 285 311 6.7E-12 T 25-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SMA_RS08525 9d3f8c8e7d5072f392d8059576c87415 408 PRINTS PR00173 Glutamate-aspartate symporter signature 218 237 6.7E-12 T 25-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SMA_RS08525 9d3f8c8e7d5072f392d8059576c87415 408 PRINTS PR00173 Glutamate-aspartate symporter signature 74 99 6.7E-12 T 25-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SMA_RS08525 9d3f8c8e7d5072f392d8059576c87415 408 PRINTS PR00173 Glutamate-aspartate symporter signature 320 339 6.7E-12 T 25-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SMA_RS08525 9d3f8c8e7d5072f392d8059576c87415 408 PRINTS PR00173 Glutamate-aspartate symporter signature 7 27 6.7E-12 T 25-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SMA_RS08525 9d3f8c8e7d5072f392d8059576c87415 408 PANTHER PTHR11958 2 395 3.6E-197 T 25-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SMA_RS08525 9d3f8c8e7d5072f392d8059576c87415 408 Gene3D G3DSA:1.10.3860.10 5 400 4.1E-89 T 25-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SMA_RS08525 9d3f8c8e7d5072f392d8059576c87415 408 Hamap MF_01582 Serine/threonine transporter SstT [sstT]. 1 402 35.524 T 25-04-2016 IPR023025 Serine/threonine transporter SstT GO:0015293|GO:0015826|GO:0032329 SMA_RS08525 9d3f8c8e7d5072f392d8059576c87415 408 Pfam PF00375 Sodium:dicarboxylate symporter family 13 396 2.4E-68 T 25-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SMA_RS01320 ecc22f4b1525152ecac4a50f9a669d05 332 Gene3D G3DSA:3.40.50.720 1 172 1.0E-51 T 25-04-2016 IPR016040 NAD(P)-binding domain SMA_RS01320 ecc22f4b1525152ecac4a50f9a669d05 332 PANTHER PTHR10366 2 332 6.8E-114 T 25-04-2016 SMA_RS01320 ecc22f4b1525152ecac4a50f9a669d05 332 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 3 328 5.2E-127 T 25-04-2016 IPR005886 UDP-glucose 4-epimerase GalE GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|UniPathway: UPA00214 SMA_RS01320 ecc22f4b1525152ecac4a50f9a669d05 332 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 254 6.3E-61 T 25-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 SMA_RS01320 ecc22f4b1525152ecac4a50f9a669d05 332 Gene3D G3DSA:3.90.25.10 256 331 1.9E-47 T 25-04-2016 SMA_RS01320 ecc22f4b1525152ecac4a50f9a669d05 332 Gene3D G3DSA:3.90.25.10 173 224 1.9E-47 T 25-04-2016 SMA_RS01320 ecc22f4b1525152ecac4a50f9a669d05 332 SUPERFAMILY SSF51735 1 329 3.14E-97 T 25-04-2016 IPR016040 NAD(P)-binding domain SMA_RS01320 ecc22f4b1525152ecac4a50f9a669d05 332 PANTHER PTHR10366:SF39 2 332 6.8E-114 T 25-04-2016 SMA_RS03460 9b13c2e1c77eebd1ee7560faa267a056 391 SMART SM01329 19 387 8.7E-168 T 25-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 SMA_RS03460 9b13c2e1c77eebd1ee7560faa267a056 391 PANTHER PTHR11835:SF52 3 153 6.9E-207 T 25-04-2016 SMA_RS03460 9b13c2e1c77eebd1ee7560faa267a056 391 PANTHER PTHR11835:SF52 177 391 6.9E-207 T 25-04-2016 SMA_RS03460 9b13c2e1c77eebd1ee7560faa267a056 391 SUPERFAMILY SSF53659 4 391 1.67E-131 T 25-04-2016 SMA_RS03460 9b13c2e1c77eebd1ee7560faa267a056 391 PANTHER PTHR11835 3 153 6.9E-207 T 25-04-2016 IPR001804 Isocitrate and isopropylmalate dehydrogenases family GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 SMA_RS03460 9b13c2e1c77eebd1ee7560faa267a056 391 PANTHER PTHR11835 177 391 6.9E-207 T 25-04-2016 IPR001804 Isocitrate and isopropylmalate dehydrogenases family GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 SMA_RS03460 9b13c2e1c77eebd1ee7560faa267a056 391 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 279 298 - T 25-04-2016 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 SMA_RS03460 9b13c2e1c77eebd1ee7560faa267a056 391 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 20 384 2.4E-104 T 25-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 SMA_RS03460 9b13c2e1c77eebd1ee7560faa267a056 391 Gene3D G3DSA:3.40.718.10 4 391 3.0E-149 T 25-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 SMA_RS05635 6e1500a1230d57a7723982e76275960f 227 Gene3D G3DSA:1.10.3720.10 11 214 4.0E-40 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SMA_RS05635 6e1500a1230d57a7723982e76275960f 227 PANTHER PTHR30614 1 219 4.7E-64 T 25-04-2016 SMA_RS05635 6e1500a1230d57a7723982e76275960f 227 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 33 214 3.7E-16 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SMA_RS05635 6e1500a1230d57a7723982e76275960f 227 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 11 108 7.6E-30 T 25-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 SMA_RS05635 6e1500a1230d57a7723982e76275960f 227 SUPERFAMILY SSF161098 13 214 3.92E-40 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SMA_RS07875 a23dfcc489e8fce45c5642466c55361f 141 PANTHER PTHR11661 1 141 7.1E-74 T 25-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 SMA_RS07875 a23dfcc489e8fce45c5642466c55361f 141 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 73 7.0E-16 T 25-04-2016 SMA_RS07875 a23dfcc489e8fce45c5642466c55361f 141 SMART SM00649 9 140 5.1E-86 T 25-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 SMA_RS07875 a23dfcc489e8fce45c5642466c55361f 141 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 141 1.8E-63 T 25-04-2016 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 SMA_RS07875 a23dfcc489e8fce45c5642466c55361f 141 Pfam PF00298 Ribosomal protein L11, RNA binding domain 71 139 1.9E-26 T 25-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 SMA_RS07875 a23dfcc489e8fce45c5642466c55361f 141 ProSitePatterns PS00359 Ribosomal protein L11 signature. 126 141 - T 25-04-2016 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 SMA_RS07875 a23dfcc489e8fce45c5642466c55361f 141 Gene3D G3DSA:1.10.10.250 72 140 7.7E-34 T 25-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 SMA_RS07875 a23dfcc489e8fce45c5642466c55361f 141 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 141 31.467 T 25-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 SMA_RS07875 a23dfcc489e8fce45c5642466c55361f 141 SUPERFAMILY SSF54747 1 84 8.63E-30 T 25-04-2016 IPR020784 Ribosomal protein L11, N-terminal SMA_RS07875 a23dfcc489e8fce45c5642466c55361f 141 SUPERFAMILY SSF46906 67 139 8.11E-28 T 25-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 SMA_RS07875 a23dfcc489e8fce45c5642466c55361f 141 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 66 4.2E-30 T 25-04-2016 IPR020784 Ribosomal protein L11, N-terminal SMA_RS07875 a23dfcc489e8fce45c5642466c55361f 141 Gene3D G3DSA:3.30.1550.10 2 71 7.6E-38 T 25-04-2016 IPR020784 Ribosomal protein L11, N-terminal SMA_RS02485 67588fb09cc7729b97958607778da4e5 796 Pfam PF04851 Type III restriction enzyme, res subunit 259 422 1.6E-16 T 25-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 SMA_RS02485 67588fb09cc7729b97958607778da4e5 796 Gene3D G3DSA:3.40.50.300 521 698 1.7E-36 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS02485 67588fb09cc7729b97958607778da4e5 796 SUPERFAMILY SSF52540 256 436 1.55E-38 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS02485 67588fb09cc7729b97958607778da4e5 796 Pfam PF00271 Helicase conserved C-terminal domain 571 654 6.3E-9 T 25-04-2016 IPR001650 Helicase, C-terminal SMA_RS02485 67588fb09cc7729b97958607778da4e5 796 SUPERFAMILY SSF52540 523 702 3.85E-37 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS02485 67588fb09cc7729b97958607778da4e5 796 SMART SM00487 256 455 1.9E-19 T 25-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain SMA_RS02485 67588fb09cc7729b97958607778da4e5 796 Hamap MF_00983 Probable primosomal protein N' [priA]. 10 795 24.4 T 25-04-2016 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 SMA_RS02485 67588fb09cc7729b97958607778da4e5 796 TIGRFAM TIGR00595 priA: primosomal protein N' 283 792 1.6E-202 T 25-04-2016 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 SMA_RS02485 67588fb09cc7729b97958607778da4e5 796 Gene3D G3DSA:3.40.50.300 259 445 5.8E-39 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS02485 67588fb09cc7729b97958607778da4e5 796 PANTHER PTHR30580 1 796 3.5E-276 T 25-04-2016 SMA_RS02485 67588fb09cc7729b97958607778da4e5 796 SMART SM00490 558 655 5.9E-9 T 25-04-2016 IPR001650 Helicase, C-terminal SMA_RS03035 dc159666be71f58373050bff902bdc71 441 Gene3D G3DSA:3.30.1330.20 216 322 1.9E-44 T 25-04-2016 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain SMA_RS03035 dc159666be71f58373050bff902bdc71 441 Gene3D G3DSA:3.40.50.1440 15 215 4.5E-92 T 25-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 SMA_RS03035 dc159666be71f58373050bff902bdc71 441 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 11 331 8.6E-126 T 25-04-2016 IPR000158 Cell division protein FtsZ GO:0005525 SMA_RS03035 dc159666be71f58373050bff902bdc71 441 SUPERFAMILY SSF52490 14 209 1.11E-67 T 25-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 SMA_RS03035 dc159666be71f58373050bff902bdc71 441 Pfam PF12327 FtsZ family, C-terminal domain 223 316 2.8E-29 T 25-04-2016 IPR024757 Cell division protein FtsZ, C-terminal SMA_RS03035 dc159666be71f58373050bff902bdc71 441 PANTHER PTHR30314 1 365 4.8E-186 T 25-04-2016 SMA_RS03035 dc159666be71f58373050bff902bdc71 441 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 15 174 4.0E-40 T 25-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 SMA_RS03035 dc159666be71f58373050bff902bdc71 441 PANTHER PTHR30314:SF3 1 365 4.8E-186 T 25-04-2016 SMA_RS03035 dc159666be71f58373050bff902bdc71 441 SUPERFAMILY SSF55307 205 319 1.74E-41 T 25-04-2016 IPR008280 Tubulin/FtsZ, C-terminal SMA_RS03035 dc159666be71f58373050bff902bdc71 441 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 10 371 37.712 T 25-04-2016 IPR000158 Cell division protein FtsZ GO:0005525 SMA_RS03035 dc159666be71f58373050bff902bdc71 441 SMART SM00865 208 325 4.5E-47 T 25-04-2016 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain SMA_RS03035 dc159666be71f58373050bff902bdc71 441 ProSitePatterns PS01134 FtsZ protein signature 1. 45 79 - T 25-04-2016 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 SMA_RS03035 dc159666be71f58373050bff902bdc71 441 PRINTS PR00423 Cell division protein FtsZ signature 99 119 2.2E-51 T 25-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 SMA_RS03035 dc159666be71f58373050bff902bdc71 441 PRINTS PR00423 Cell division protein FtsZ signature 190 212 2.2E-51 T 25-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 SMA_RS03035 dc159666be71f58373050bff902bdc71 441 PRINTS PR00423 Cell division protein FtsZ signature 127 148 2.2E-51 T 25-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 SMA_RS03035 dc159666be71f58373050bff902bdc71 441 PRINTS PR00423 Cell division protein FtsZ signature 213 234 2.2E-51 T 25-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 SMA_RS03035 dc159666be71f58373050bff902bdc71 441 SMART SM00864 14 206 6.7E-110 T 25-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 SMA_RS10180 25068607df076df2591fc05d863872ac 197 Pfam PF14520 Helix-hairpin-helix domain 71 127 3.3E-11 T 25-04-2016 SMA_RS10180 25068607df076df2591fc05d863872ac 197 Pfam PF07499 RuvA, C-terminal domain 151 195 7.7E-10 T 25-04-2016 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 SMA_RS10180 25068607df076df2591fc05d863872ac 197 SUPERFAMILY SSF50249 1 62 4.23E-15 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMA_RS10180 25068607df076df2591fc05d863872ac 197 SMART SM00278 72 91 3.7 T 25-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 SMA_RS10180 25068607df076df2591fc05d863872ac 197 SMART SM00278 107 126 8.0 T 25-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 SMA_RS10180 25068607df076df2591fc05d863872ac 197 SUPERFAMILY SSF47781 65 135 2.07E-19 T 25-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 SMA_RS10180 25068607df076df2591fc05d863872ac 197 PANTHER PTHR33796 2 197 1.4E-67 T 25-04-2016 SMA_RS10180 25068607df076df2591fc05d863872ac 197 SUPERFAMILY SSF46929 149 195 2.09E-9 T 25-04-2016 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 SMA_RS10180 25068607df076df2591fc05d863872ac 197 Pfam PF01330 RuvA N terminal domain 1 61 1.9E-18 T 25-04-2016 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 SMA_RS10180 25068607df076df2591fc05d863872ac 197 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 195 29.074 T 25-04-2016 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 SMA_RS10180 25068607df076df2591fc05d863872ac 197 Gene3D G3DSA:1.10.150.20 66 141 8.2E-27 T 25-04-2016 SMA_RS10180 25068607df076df2591fc05d863872ac 197 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 2 195 1.3E-48 T 25-04-2016 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 SMA_RS10180 25068607df076df2591fc05d863872ac 197 Gene3D G3DSA:2.40.50.140 1 65 5.8E-21 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMA_RS10180 25068607df076df2591fc05d863872ac 197 Gene3D G3DSA:1.10.8.10 149 195 5.5E-12 T 25-04-2016 SMA_RS07150 a9c048025bb354b2b664d04110fdfa10 371 Pfam PF02595 Glycerate kinase family 3 366 2.9E-122 T 25-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 SMA_RS07150 a9c048025bb354b2b664d04110fdfa10 371 PIRSF PIRSF006078 1 371 6.3E-114 T 25-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 SMA_RS07150 a9c048025bb354b2b664d04110fdfa10 371 TIGRFAM TIGR00045 TIGR00045: glycerate kinase 3 367 3.0E-127 T 25-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 SMA_RS07150 a9c048025bb354b2b664d04110fdfa10 371 SUPERFAMILY SSF110738 1 367 1.83E-118 T 25-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 SMA_RS07150 a9c048025bb354b2b664d04110fdfa10 371 PANTHER PTHR21599:SF0 1 371 1.6E-130 T 25-04-2016 SMA_RS07150 a9c048025bb354b2b664d04110fdfa10 371 Gene3D G3DSA:3.90.1510.10 43 269 1.4E-73 T 25-04-2016 IPR018193 Glycerate kinase, flavodoxin-like domain GO:0008887|GO:0031388 SMA_RS07150 a9c048025bb354b2b664d04110fdfa10 371 PANTHER PTHR21599 1 371 1.6E-130 T 25-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 SMA_RS05475 18f76255c864c4306a6482c99d38e285 270 PANTHER PTHR31829 1 270 1.5E-198 T 25-04-2016 SMA_RS05475 18f76255c864c4306a6482c99d38e285 270 PIRSF PIRSF029271 1 270 1.9E-135 T 25-04-2016 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466|UniPathway: UPA00245 SMA_RS05475 18f76255c864c4306a6482c99d38e285 270 TIGRFAM TIGR00343 TIGR00343: pyridoxal 5'-phosphate synthase, synthase subunit Pdx1 1 263 2.8E-137 T 25-04-2016 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466|UniPathway: UPA00245 SMA_RS05475 18f76255c864c4306a6482c99d38e285 270 Pfam PF01680 SOR/SNZ family 1 189 2.0E-97 T 25-04-2016 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466|UniPathway: UPA00245 SMA_RS05475 18f76255c864c4306a6482c99d38e285 270 Gene3D G3DSA:3.20.20.70 3 138 1.8E-51 T 25-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SMA_RS05475 18f76255c864c4306a6482c99d38e285 270 Gene3D G3DSA:3.20.20.70 170 257 1.8E-51 T 25-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SMA_RS05475 18f76255c864c4306a6482c99d38e285 270 SUPERFAMILY SSF51366 1 245 7.53E-61 T 25-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 SMA_RS05890 3877dda184008bf24292f0c21790a603 226 Gene3D G3DSA:1.10.3720.10 12 223 1.7E-33 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SMA_RS05890 3877dda184008bf24292f0c21790a603 226 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 39 223 2.1E-14 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SMA_RS05890 3877dda184008bf24292f0c21790a603 226 SUPERFAMILY SSF161098 14 209 1.31E-34 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SMA_RS05890 3877dda184008bf24292f0c21790a603 226 PANTHER PTHR30614 1 225 4.5E-55 T 25-04-2016 SMA_RS06425 dcf0fefdc17289456de97581de0d695a 319 Pfam PF00535 Glycosyl transferase family 2 4 133 1.9E-37 T 25-04-2016 IPR001173 Glycosyltransferase 2-like SMA_RS06425 dcf0fefdc17289456de97581de0d695a 319 Gene3D G3DSA:3.90.550.10 1 187 1.2E-55 T 25-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SMA_RS06425 dcf0fefdc17289456de97581de0d695a 319 SUPERFAMILY SSF53448 2 214 5.07E-56 T 25-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SMA_RS06425 dcf0fefdc17289456de97581de0d695a 319 PANTHER PTHR22916 1 272 2.0E-48 T 25-04-2016 SMA_RS06425 dcf0fefdc17289456de97581de0d695a 319 PANTHER PTHR22916:SF24 1 272 2.0E-48 T 25-04-2016 SMA_RS03750 bbba67089c16bbeb1da0f36d68e8075e 237 Hamap MF_01393 ATP synthase subunit a [atpB]. 9 235 14.023 T 25-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 SMA_RS03750 bbba67089c16bbeb1da0f36d68e8075e 237 ProSitePatterns PS00449 ATP synthase a subunit signature. 165 174 - T 25-04-2016 IPR023011 ATPase, F0 complex, subunit A, active site SMA_RS03750 bbba67089c16bbeb1da0f36d68e8075e 237 PRINTS PR00123 ATP synthase A subunit signature 162 184 9.4E-19 T 25-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 SMA_RS03750 bbba67089c16bbeb1da0f36d68e8075e 237 PRINTS PR00123 ATP synthase A subunit signature 146 161 9.4E-19 T 25-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 SMA_RS03750 bbba67089c16bbeb1da0f36d68e8075e 237 PRINTS PR00123 ATP synthase A subunit signature 215 230 9.4E-19 T 25-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 SMA_RS03750 bbba67089c16bbeb1da0f36d68e8075e 237 PRINTS PR00123 ATP synthase A subunit signature 78 94 9.4E-19 T 25-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 SMA_RS03750 bbba67089c16bbeb1da0f36d68e8075e 237 PANTHER PTHR11410:SF7 1 237 1.8E-60 T 25-04-2016 SMA_RS03750 bbba67089c16bbeb1da0f36d68e8075e 237 SUPERFAMILY SSF81336 70 229 1.22E-37 T 25-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 SMA_RS03750 bbba67089c16bbeb1da0f36d68e8075e 237 PANTHER PTHR11410 1 237 1.8E-60 T 25-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 SMA_RS03750 bbba67089c16bbeb1da0f36d68e8075e 237 Pfam PF00119 ATP synthase A chain 22 228 1.1E-51 T 25-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 SMA_RS03750 bbba67089c16bbeb1da0f36d68e8075e 237 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 15 231 2.2E-47 T 25-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 SMA_RS03750 bbba67089c16bbeb1da0f36d68e8075e 237 Gene3D G3DSA:1.20.120.220 71 233 4.0E-41 T 25-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 SMA_RS09120 95406f1e9681df5087f5d2cfc9f5f293 336 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 6 314 4.1E-127 T 25-04-2016 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 SMA_RS09120 95406f1e9681df5087f5d2cfc9f5f293 336 PANTHER PTHR11735:SF6 1 336 1.7E-141 T 25-04-2016 SMA_RS09120 95406f1e9681df5087f5d2cfc9f5f293 336 Gene3D G3DSA:3.30.420.40 241 288 2.0E-4 T 25-04-2016 SMA_RS09120 95406f1e9681df5087f5d2cfc9f5f293 336 PANTHER PTHR11735 1 336 1.7E-141 T 25-04-2016 SMA_RS09120 95406f1e9681df5087f5d2cfc9f5f293 336 Pfam PF00814 Glycoprotease family 26 307 9.6E-99 T 25-04-2016 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 SMA_RS09120 95406f1e9681df5087f5d2cfc9f5f293 336 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 79 99 1.4E-46 T 25-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 SMA_RS09120 95406f1e9681df5087f5d2cfc9f5f293 336 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 100 119 1.4E-46 T 25-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 SMA_RS09120 95406f1e9681df5087f5d2cfc9f5f293 336 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 7 20 1.4E-46 T 25-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 SMA_RS09120 95406f1e9681df5087f5d2cfc9f5f293 336 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 266 275 1.4E-46 T 25-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 SMA_RS09120 95406f1e9681df5087f5d2cfc9f5f293 336 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 133 145 1.4E-46 T 25-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 SMA_RS09120 95406f1e9681df5087f5d2cfc9f5f293 336 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 156 177 1.4E-46 T 25-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 SMA_RS09120 95406f1e9681df5087f5d2cfc9f5f293 336 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 4 332 57.944 T 25-04-2016 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 SMA_RS09120 95406f1e9681df5087f5d2cfc9f5f293 336 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 7 306 2.9E-102 T 25-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 SMA_RS09120 95406f1e9681df5087f5d2cfc9f5f293 336 SUPERFAMILY SSF53067 5 310 2.37E-38 T 25-04-2016 SMA_RS09120 95406f1e9681df5087f5d2cfc9f5f293 336 Gene3D G3DSA:3.30.420.40 5 161 1.5E-46 T 25-04-2016 SMA_RS09115 84ef89e3a72c66a11824663cda1b6900 231 Pfam PF03591 AzlC protein 15 155 2.5E-35 T 25-04-2016 IPR011606 Branched-chain amino acid transport, permease SMA_RS09115 84ef89e3a72c66a11824663cda1b6900 231 PANTHER PTHR34979 6 231 4.1E-52 T 25-04-2016 SMA_RS02230 278264ce9f4d296761910b877707e73b 180 Gene3D G3DSA:3.40.50.450 2 179 3.4E-53 T 25-04-2016 SMA_RS02230 278264ce9f4d296761910b877707e73b 180 PANTHER PTHR31223:SF0 2 179 1.4E-63 T 25-04-2016 SMA_RS02230 278264ce9f4d296761910b877707e73b 180 TIGRFAM TIGR00730 TIGR00730: TIGR00730 family protein 2 175 3.7E-41 T 25-04-2016 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG SMA_RS02230 278264ce9f4d296761910b877707e73b 180 SUPERFAMILY SSF102405 1 178 3.21E-51 T 25-04-2016 SMA_RS02230 278264ce9f4d296761910b877707e73b 180 PANTHER PTHR31223 2 179 1.4E-63 T 25-04-2016 SMA_RS02230 278264ce9f4d296761910b877707e73b 180 Pfam PF03641 Possible lysine decarboxylase 45 169 4.3E-34 T 25-04-2016 IPR031100 LOG family SMA_RS10045 8211eccd9990bd62a07dfd9701df1557 153 PANTHER PTHR40028 1 149 3.7E-61 T 25-04-2016 SMA_RS10045 8211eccd9990bd62a07dfd9701df1557 153 PANTHER PTHR40028:SF1 1 149 3.7E-61 T 25-04-2016 SMA_RS10045 8211eccd9990bd62a07dfd9701df1557 153 PIRSF PIRSF010607 1 150 3.4E-63 T 25-04-2016 IPR008463 Transcriptional repressor of class III stress genes GO:0003677|GO:0006355|GO:0006950 SMA_RS10045 8211eccd9990bd62a07dfd9701df1557 153 Pfam PF05848 Firmicute transcriptional repressor of class III stress genes (CtsR) 4 146 1.0E-50 T 25-04-2016 IPR008463 Transcriptional repressor of class III stress genes GO:0003677|GO:0006355|GO:0006950 SMA_RS08700 72f9f554a256ed5c7bb021e5d2e3c34f 404 PANTHER PTHR11751 9 401 2.6E-160 T 25-04-2016 SMA_RS08700 72f9f554a256ed5c7bb021e5d2e3c34f 404 Pfam PF00155 Aminotransferase class I and II 34 383 8.4E-47 T 25-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 SMA_RS08700 72f9f554a256ed5c7bb021e5d2e3c34f 404 Gene3D G3DSA:3.90.1150.10 280 403 1.1E-38 T 25-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SMA_RS08700 72f9f554a256ed5c7bb021e5d2e3c34f 404 SUPERFAMILY SSF53383 7 402 4.12E-94 T 25-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SMA_RS08700 72f9f554a256ed5c7bb021e5d2e3c34f 404 Gene3D G3DSA:3.40.640.10 51 279 1.2E-65 T 25-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SMA_RS08700 72f9f554a256ed5c7bb021e5d2e3c34f 404 PANTHER PTHR11751:SF303 9 401 2.6E-160 T 25-04-2016 SMA_RS09485 acfbe985fb490a4cb401d2ced4af3b66 137 SUPERFAMILY SSF140931 15 95 1.44E-22 T 25-04-2016 IPR003812 Fido domain SMA_RS09485 acfbe985fb490a4cb401d2ced4af3b66 137 Pfam PF02661 Fic/DOC family 4 45 4.5E-12 T 25-04-2016 IPR003812 Fido domain SMA_RS09485 acfbe985fb490a4cb401d2ced4af3b66 137 Gene3D G3DSA:1.10.3290.10 12 92 5.3E-25 T 25-04-2016 IPR003812 Fido domain SMA_RS09485 acfbe985fb490a4cb401d2ced4af3b66 137 PANTHER PTHR13504 22 87 2.0E-12 T 25-04-2016 SMA_RS10350 9b3f9cb1737dd97dfd0d4bc6367d2331 658 PIRSF PIRSF026583 1 657 8.3E-248 T 25-04-2016 IPR014528 Cyclic-di-AMP phosphodiesterase GdpP/PdeA SMA_RS10350 9b3f9cb1737dd97dfd0d4bc6367d2331 658 PANTHER PTHR12112:SF18 544 615 8.9E-71 T 25-04-2016 SMA_RS10350 9b3f9cb1737dd97dfd0d4bc6367d2331 658 PANTHER PTHR12112:SF18 13 521 8.9E-71 T 25-04-2016 SMA_RS10350 9b3f9cb1737dd97dfd0d4bc6367d2331 658 Pfam PF02272 DHHA1 domain 588 640 2.3E-7 T 25-04-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7 SMA_RS10350 9b3f9cb1737dd97dfd0d4bc6367d2331 658 PANTHER PTHR12112 544 615 8.9E-71 T 25-04-2016 SMA_RS10350 9b3f9cb1737dd97dfd0d4bc6367d2331 658 PANTHER PTHR12112 13 521 8.9E-71 T 25-04-2016 SMA_RS10350 9b3f9cb1737dd97dfd0d4bc6367d2331 658 Gene3D G3DSA:3.90.1640.10 340 530 3.5E-39 T 25-04-2016 SMA_RS10350 9b3f9cb1737dd97dfd0d4bc6367d2331 658 Pfam PF01368 DHH family 341 496 6.3E-19 T 25-04-2016 IPR001667 DDH domain SMA_RS10350 9b3f9cb1737dd97dfd0d4bc6367d2331 658 SUPERFAMILY SSF64182 340 638 1.7E-64 T 25-04-2016 SMA_RS03700 26ebf141a999d4b21040859f9fd96c88 286 PANTHER PTHR10804:SF108 128 283 1.7E-165 T 25-04-2016 SMA_RS03700 26ebf141a999d4b21040859f9fd96c88 286 PANTHER PTHR10804:SF108 1 101 1.7E-165 T 25-04-2016 SMA_RS03700 26ebf141a999d4b21040859f9fd96c88 286 Gene3D G3DSA:3.90.230.10 1 281 1.1E-77 T 25-04-2016 IPR000994 Peptidase M24, structural domain SMA_RS03700 26ebf141a999d4b21040859f9fd96c88 286 PANTHER PTHR10804 128 283 1.7E-165 T 25-04-2016 SMA_RS03700 26ebf141a999d4b21040859f9fd96c88 286 PANTHER PTHR10804 1 101 1.7E-165 T 25-04-2016 SMA_RS03700 26ebf141a999d4b21040859f9fd96c88 286 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 129 279 4.4E-53 T 25-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 SMA_RS03700 26ebf141a999d4b21040859f9fd96c88 286 Hamap MF_01974 Methionine aminopeptidase [map]. 2 280 35.934 T 25-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 SMA_RS03700 26ebf141a999d4b21040859f9fd96c88 286 Pfam PF00557 Metallopeptidase family M24 11 100 1.9E-8 T 25-04-2016 IPR000994 Peptidase M24, structural domain SMA_RS03700 26ebf141a999d4b21040859f9fd96c88 286 Pfam PF00557 Metallopeptidase family M24 130 271 3.0E-28 T 25-04-2016 IPR000994 Peptidase M24, structural domain SMA_RS03700 26ebf141a999d4b21040859f9fd96c88 286 SUPERFAMILY SSF55920 1 101 7.66E-68 T 25-04-2016 IPR000994 Peptidase M24, structural domain SMA_RS03700 26ebf141a999d4b21040859f9fd96c88 286 SUPERFAMILY SSF55920 129 279 7.66E-68 T 25-04-2016 IPR000994 Peptidase M24, structural domain SMA_RS00815 fba776ea4f39df31e4cd7c596530034c 131 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 1 117 1.5E-33 T 25-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 SMA_RS00815 fba776ea4f39df31e4cd7c596530034c 131 PIRSF PIRSF002070 1 125 2.4E-34 T 25-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 SMA_RS00815 fba776ea4f39df31e4cd7c596530034c 131 SUPERFAMILY SSF50249 1 131 1.1E-39 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMA_RS00815 fba776ea4f39df31e4cd7c596530034c 131 Hamap MF_00984 Single-stranded DNA-binding protein. 2 106 30.807 T 25-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 SMA_RS00815 fba776ea4f39df31e4cd7c596530034c 131 PANTHER PTHR10302 1 114 7.3E-33 T 25-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 SMA_RS00815 fba776ea4f39df31e4cd7c596530034c 131 Gene3D G3DSA:2.40.50.140 1 115 3.4E-38 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMA_RS00815 fba776ea4f39df31e4cd7c596530034c 131 Pfam PF00436 Single-strand binding protein family 3 102 1.0E-29 T 25-04-2016 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 SMA_RS02530 95c036877849c4f621d4a1cb5115404c 118 PANTHER PTHR10724 1 85 1.3E-29 T 25-04-2016 SMA_RS02530 95c036877849c4f621d4a1cb5115404c 118 Pfam PF00575 S1 RNA binding domain 3 73 1.3E-16 T 25-04-2016 IPR003029 S1 domain GO:0003676 SMA_RS02530 95c036877849c4f621d4a1cb5115404c 118 SMART SM00316 2 73 1.5E-21 T 25-04-2016 IPR022967 RNA-binding domain, S1 SMA_RS02530 95c036877849c4f621d4a1cb5115404c 118 SUPERFAMILY SSF50249 1 83 1.14E-20 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMA_RS02530 95c036877849c4f621d4a1cb5115404c 118 Gene3D G3DSA:2.40.50.140 2 79 2.8E-23 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMA_RS00945 214ac4f2f74ac41252fa860ea4cab161 774 SUPERFAMILY SSF53955 135 336 1.66E-68 T 25-04-2016 IPR023346 Lysozyme-like domain SMA_RS00945 214ac4f2f74ac41252fa860ea4cab161 774 SUPERFAMILY SSF56601 297 319 5.63E-98 T 25-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SMA_RS00945 214ac4f2f74ac41252fa860ea4cab161 774 SUPERFAMILY SSF56601 352 705 5.63E-98 T 25-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SMA_RS00945 214ac4f2f74ac41252fa860ea4cab161 774 PANTHER PTHR32282 73 696 1.8E-187 T 25-04-2016 SMA_RS00945 214ac4f2f74ac41252fa860ea4cab161 774 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 156 695 1.1E-165 T 25-04-2016 SMA_RS00945 214ac4f2f74ac41252fa860ea4cab161 774 Pfam PF00905 Penicillin binding protein transpeptidase domain 414 691 5.9E-35 T 25-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 SMA_RS00945 214ac4f2f74ac41252fa860ea4cab161 774 Pfam PF00912 Transglycosylase 147 315 7.7E-58 T 25-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 SMA_RS00945 214ac4f2f74ac41252fa860ea4cab161 774 Gene3D G3DSA:3.40.710.10 318 728 9.5E-98 T 25-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SMA_RS00945 214ac4f2f74ac41252fa860ea4cab161 774 Gene3D G3DSA:1.10.3810.10 147 317 2.9E-68 T 25-04-2016 SMA_RS00945 214ac4f2f74ac41252fa860ea4cab161 774 PANTHER PTHR32282:SF5 73 696 1.8E-187 T 25-04-2016 SMA_RS09155 faa9196d9431e3de3855faea2aacd433 1505 Gene3D G3DSA:3.60.20.10 23 435 6.9E-161 T 25-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SMA_RS09155 faa9196d9431e3de3855faea2aacd433 1505 Pfam PF01645 Conserved region in glutamate synthase 786 1155 2.1E-147 T 25-04-2016 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 SMA_RS09155 faa9196d9431e3de3855faea2aacd433 1505 Gene3D G3DSA:3.20.20.70 439 773 1.8E-87 T 25-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SMA_RS09155 faa9196d9431e3de3855faea2aacd433 1505 PANTHER PTHR11938:SF1 12 1465 0.0 T 25-04-2016 SMA_RS09155 faa9196d9431e3de3855faea2aacd433 1505 Pfam PF04898 Glutamate synthase central domain 451 726 6.9E-101 T 25-04-2016 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 UniPathway: UPA00045 SMA_RS09155 faa9196d9431e3de3855faea2aacd433 1505 SUPERFAMILY SSF69336 1207 1459 2.88E-83 T 25-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 SMA_RS09155 faa9196d9431e3de3855faea2aacd433 1505 SUPERFAMILY SSF51395 431 1184 3.53E-236 T 25-04-2016 SMA_RS09155 faa9196d9431e3de3855faea2aacd433 1505 Gene3D G3DSA:2.160.20.60 1207 1473 6.1E-91 T 25-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 SMA_RS09155 faa9196d9431e3de3855faea2aacd433 1505 Gene3D G3DSA:3.20.20.70 800 1193 1.9E-165 T 25-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SMA_RS09155 faa9196d9431e3de3855faea2aacd433 1505 SUPERFAMILY SSF56235 23 428 1.05E-140 T 25-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SMA_RS09155 faa9196d9431e3de3855faea2aacd433 1505 PANTHER PTHR11938 12 1465 0.0 T 25-04-2016 SMA_RS09155 faa9196d9431e3de3855faea2aacd433 1505 Pfam PF01493 GXGXG motif 1228 1412 1.3E-71 T 25-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 SMA_RS09155 faa9196d9431e3de3855faea2aacd433 1505 Pfam PF00310 Glutamine amidotransferases class-II 23 424 3.9E-161 T 25-04-2016 IPR017932 Glutamine amidotransferase type 2 domain SMA_RS09545 9141577731c786da3562644958c9f421 284 SUPERFAMILY SSF53098 120 282 3.16E-40 T 25-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMA_RS09545 9141577731c786da3562644958c9f421 284 Pfam PF00665 Integrase core domain 123 238 5.3E-32 T 25-04-2016 IPR001584 Integrase, catalytic core GO:0015074 SMA_RS09545 9141577731c786da3562644958c9f421 284 PANTHER PTHR32552 15 280 1.7E-62 T 25-04-2016 SMA_RS09545 9141577731c786da3562644958c9f421 284 Pfam PF13276 HTH-like domain 51 101 9.5E-12 T 25-04-2016 IPR025948 HTH-like domain SMA_RS09545 9141577731c786da3562644958c9f421 284 Gene3D G3DSA:3.30.420.10 120 276 7.8E-38 T 25-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMA_RS05450 017e2f4be15e01c080c1f91a24a4277f 426 Gene3D G3DSA:3.90.1150.10 290 426 2.2E-47 T 25-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SMA_RS05450 017e2f4be15e01c080c1f91a24a4277f 426 PANTHER PTHR11808 267 426 2.4E-244 T 25-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 SMA_RS05450 017e2f4be15e01c080c1f91a24a4277f 426 PANTHER PTHR11808 1 237 2.4E-244 T 25-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 SMA_RS05450 017e2f4be15e01c080c1f91a24a4277f 426 PIRSF PIRSF001434 1 426 3.8E-131 T 25-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 SMA_RS05450 017e2f4be15e01c080c1f91a24a4277f 426 TIGRFAM TIGR01326 OAH_OAS_sulfhy: O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase 6 424 3.1E-193 T 25-04-2016 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 KEGG: 00270+2.5.1.49|MetaCyc: PWY-5344|MetaCyc: PWY-7174 SMA_RS05450 017e2f4be15e01c080c1f91a24a4277f 426 PANTHER PTHR11808:SF12 267 426 2.4E-244 T 25-04-2016 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 KEGG: 00270+2.5.1.49|MetaCyc: PWY-5344|MetaCyc: PWY-7174 SMA_RS05450 017e2f4be15e01c080c1f91a24a4277f 426 PANTHER PTHR11808:SF12 1 237 2.4E-244 T 25-04-2016 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 KEGG: 00270+2.5.1.49|MetaCyc: PWY-5344|MetaCyc: PWY-7174 SMA_RS05450 017e2f4be15e01c080c1f91a24a4277f 426 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 8 424 6.2E-143 T 25-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 SMA_RS05450 017e2f4be15e01c080c1f91a24a4277f 426 Gene3D G3DSA:3.40.640.10 6 288 9.5E-124 T 25-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SMA_RS05450 017e2f4be15e01c080c1f91a24a4277f 426 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 200 214 - T 25-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 SMA_RS05450 017e2f4be15e01c080c1f91a24a4277f 426 SUPERFAMILY SSF53383 5 423 5.05E-127 T 25-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SMA_RS08100 4fab7c904b358228a7c2972016299b03 83 PANTHER PTHR41304:SF1 3 83 3.2E-19 T 25-04-2016 SMA_RS08100 4fab7c904b358228a7c2972016299b03 83 PANTHER PTHR41304 3 83 3.2E-19 T 25-04-2016 SMA_RS08100 4fab7c904b358228a7c2972016299b03 83 PIRSF PIRSF031653 1 83 2.2E-32 T 25-04-2016 IPR016979 Protein of unknown function DUF2129 SMA_RS08100 4fab7c904b358228a7c2972016299b03 83 Hamap MF_01126 UPF0298 protein . 3 80 22.178 T 25-04-2016 IPR016979 Protein of unknown function DUF2129 SMA_RS08100 4fab7c904b358228a7c2972016299b03 83 Pfam PF09902 Uncharacterized protein conserved in bacteria (DUF2129) 7 76 4.8E-29 T 25-04-2016 IPR016979 Protein of unknown function DUF2129 SMA_RS03655 7d687914e4f2d4ae0ed99369df1bf0fd 165 Gene3D G3DSA:3.30.450.40 2 150 3.7E-42 T 25-04-2016 IPR029016 GAF domain-like SMA_RS03655 7d687914e4f2d4ae0ed99369df1bf0fd 165 SUPERFAMILY SSF55781 3 149 5.45E-36 T 25-04-2016 IPR029016 GAF domain-like SMA_RS03655 7d687914e4f2d4ae0ed99369df1bf0fd 165 Pfam PF13185 GAF domain 48 147 9.9E-10 T 25-04-2016 IPR003018 GAF domain GO:0005515 SMA_RS03655 7d687914e4f2d4ae0ed99369df1bf0fd 165 PANTHER PTHR21021 6 147 2.0E-40 T 25-04-2016 SMA_RS05910 f814dfcc3c7240646889a41c16e15456 301 SUPERFAMILY SSF53850 86 292 1.21E-16 T 25-04-2016 SMA_RS05910 f814dfcc3c7240646889a41c16e15456 301 SUPERFAMILY SSF46785 1 89 3.63E-22 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMA_RS05910 f814dfcc3c7240646889a41c16e15456 301 Gene3D G3DSA:1.10.10.10 1 81 2.5E-27 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMA_RS05910 f814dfcc3c7240646889a41c16e15456 301 PANTHER PTHR30346 1 296 1.1E-42 T 25-04-2016 SMA_RS05910 f814dfcc3c7240646889a41c16e15456 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.2E-9 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMA_RS05910 f814dfcc3c7240646889a41c16e15456 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.2E-9 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMA_RS05910 f814dfcc3c7240646889a41c16e15456 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.2E-9 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMA_RS05910 f814dfcc3c7240646889a41c16e15456 301 Pfam PF03466 LysR substrate binding domain 104 294 1.9E-14 T 25-04-2016 IPR005119 LysR, substrate-binding SMA_RS05910 f814dfcc3c7240646889a41c16e15456 301 PANTHER PTHR30346:SF0 1 296 1.1E-42 T 25-04-2016 SMA_RS05910 f814dfcc3c7240646889a41c16e15456 301 Gene3D G3DSA:3.40.190.10 104 203 3.4E-8 T 25-04-2016 SMA_RS05910 f814dfcc3c7240646889a41c16e15456 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 61 5.6E-21 T 25-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SMA_RS08150 ead2201a01fb6fd7e63815efc9f9bd9d 260 PANTHER PTHR24220:SF438 5 254 8.9E-132 T 25-04-2016 SMA_RS08150 ead2201a01fb6fd7e63815efc9f9bd9d 260 Gene3D G3DSA:3.40.50.300 4 236 1.2E-60 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS08150 ead2201a01fb6fd7e63815efc9f9bd9d 260 SUPERFAMILY SSF52540 4 229 4.8E-57 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS08150 ead2201a01fb6fd7e63815efc9f9bd9d 260 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SMA_RS08150 ead2201a01fb6fd7e63815efc9f9bd9d 260 Pfam PF00005 ABC transporter 20 167 2.6E-29 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMA_RS08150 ead2201a01fb6fd7e63815efc9f9bd9d 260 PANTHER PTHR24220 5 254 8.9E-132 T 25-04-2016 SMA_RS08150 ead2201a01fb6fd7e63815efc9f9bd9d 260 SMART SM00382 28 217 2.1E-15 T 25-04-2016 IPR003593 AAA+ ATPase domain SMA_RS04475 3ef7d52242b7d63ec4c6be3d15072673 209 Gene3D G3DSA:3.40.50.2020 3 207 3.9E-60 T 25-04-2016 IPR029057 Phosphoribosyltransferase-like SMA_RS04475 3ef7d52242b7d63ec4c6be3d15072673 209 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 19 178 6.0E-49 T 25-04-2016 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|UniPathway: UPA00070 SMA_RS04475 3ef7d52242b7d63ec4c6be3d15072673 209 SUPERFAMILY SSF53271 11 207 8.39E-53 T 25-04-2016 IPR029057 Phosphoribosyltransferase-like SMA_RS04475 3ef7d52242b7d63ec4c6be3d15072673 209 Pfam PF00156 Phosphoribosyl transferase domain 54 188 1.1E-18 T 25-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 SMA_RS04475 3ef7d52242b7d63ec4c6be3d15072673 209 PANTHER PTHR19278 3 203 1.1E-66 T 25-04-2016 SMA_RS04475 3ef7d52242b7d63ec4c6be3d15072673 209 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 209 30.79 T 25-04-2016 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|UniPathway: UPA00070 SMA_RS07970 3ddc8236e8b2a4fe7d9ed8210f27b704 182 SUPERFAMILY SSF46689 4 66 1.09E-15 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMA_RS07970 3ddc8236e8b2a4fe7d9ed8210f27b704 182 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 4.1E-5 T 25-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SMA_RS07970 3ddc8236e8b2a4fe7d9ed8210f27b704 182 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 4.1E-5 T 25-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SMA_RS07970 3ddc8236e8b2a4fe7d9ed8210f27b704 182 Gene3D G3DSA:1.10.357.10 1 166 4.3E-19 T 25-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 SMA_RS07970 3ddc8236e8b2a4fe7d9ed8210f27b704 182 PANTHER PTHR30328 7 181 4.3E-22 T 25-04-2016 SMA_RS07970 3ddc8236e8b2a4fe7d9ed8210f27b704 182 PANTHER PTHR30328:SF20 7 181 4.3E-22 T 25-04-2016 SMA_RS07970 3ddc8236e8b2a4fe7d9ed8210f27b704 182 Pfam PF00440 Bacterial regulatory proteins, tetR family 17 58 3.2E-8 T 25-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SMA_RS06065 3cb1ac12ea9f55e3c8c5d2dacf7e077d 579 Gene3D G3DSA:3.40.50.300 331 563 4.4E-78 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS06065 3cb1ac12ea9f55e3c8c5d2dacf7e077d 579 SUPERFAMILY SSF90123 4 313 1.31E-67 T 25-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SMA_RS06065 3cb1ac12ea9f55e3c8c5d2dacf7e077d 579 Pfam PF00664 ABC transporter transmembrane region 19 280 1.1E-40 T 25-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SMA_RS06065 3cb1ac12ea9f55e3c8c5d2dacf7e077d 579 Pfam PF00005 ABC transporter 350 497 1.9E-32 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMA_RS06065 3cb1ac12ea9f55e3c8c5d2dacf7e077d 579 PANTHER PTHR24221 1 579 8.4E-192 T 25-04-2016 SMA_RS06065 3cb1ac12ea9f55e3c8c5d2dacf7e077d 579 SMART SM00382 359 545 4.3E-14 T 25-04-2016 IPR003593 AAA+ ATPase domain SMA_RS06065 3cb1ac12ea9f55e3c8c5d2dacf7e077d 579 Gene3D G3DSA:1.20.1560.10 3 318 6.1E-65 T 25-04-2016 SMA_RS06065 3cb1ac12ea9f55e3c8c5d2dacf7e077d 579 SUPERFAMILY SSF52540 321 569 4.57E-87 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS06065 3cb1ac12ea9f55e3c8c5d2dacf7e077d 579 ProSitePatterns PS00211 ABC transporters family signature. 471 485 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SMA_RS00225 e1c80a61c309f24210489d7217d44b40 251 Hamap MF_00201 DNA repair protein RecO [recO]. 2 243 25.043 T 25-04-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 SMA_RS00225 e1c80a61c309f24210489d7217d44b40 251 Gene3D G3DSA:2.40.50.140 1 81 8.9E-9 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMA_RS00225 e1c80a61c309f24210489d7217d44b40 251 PANTHER PTHR33991 2 250 2.7E-50 T 25-04-2016 SMA_RS00225 e1c80a61c309f24210489d7217d44b40 251 Pfam PF11967 Recombination protein O N terminal 1 78 1.9E-19 T 25-04-2016 IPR022572 DNA replication/recombination mediator RecO, N-terminal SMA_RS00225 e1c80a61c309f24210489d7217d44b40 251 Pfam PF02565 Recombination protein O C terminal 84 237 5.8E-36 T 25-04-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 SMA_RS00225 e1c80a61c309f24210489d7217d44b40 251 SUPERFAMILY SSF57863 80 232 4.71E-38 T 25-04-2016 SMA_RS00225 e1c80a61c309f24210489d7217d44b40 251 SUPERFAMILY SSF50249 2 78 1.71E-13 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMA_RS00225 e1c80a61c309f24210489d7217d44b40 251 TIGRFAM TIGR00613 reco: DNA repair protein RecO 5 243 3.8E-76 T 25-04-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 SMA_RS00775 739dfa0da1e2e397f32eeade34494313 363 SUPERFAMILY SSF56059 101 296 3.16E-55 T 25-04-2016 SMA_RS00775 739dfa0da1e2e397f32eeade34494313 363 Gene3D G3DSA:3.30.470.20 140 355 9.6E-81 T 25-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 SMA_RS00775 739dfa0da1e2e397f32eeade34494313 363 Gene3D G3DSA:3.40.50.20 3 110 4.6E-36 T 25-04-2016 IPR016185 Pre-ATP-grasp domain SMA_RS00775 739dfa0da1e2e397f32eeade34494313 363 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 6 351 40.536 T 25-04-2016 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 SMA_RS00775 739dfa0da1e2e397f32eeade34494313 363 Pfam PF02222 ATP-grasp domain 111 276 1.7E-46 T 25-04-2016 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type UniPathway: UPA00074 SMA_RS00775 739dfa0da1e2e397f32eeade34494313 363 PANTHER PTHR11609 1 356 1.2E-128 T 25-04-2016 SMA_RS00775 739dfa0da1e2e397f32eeade34494313 363 SUPERFAMILY SSF51246 300 355 1.73E-15 T 25-04-2016 IPR011054 Rudiment single hybrid motif SMA_RS00775 739dfa0da1e2e397f32eeade34494313 363 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 6 354 1.6E-112 T 25-04-2016 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 SMA_RS00775 739dfa0da1e2e397f32eeade34494313 363 PANTHER PTHR11609:SF5 1 356 1.2E-128 T 25-04-2016 SMA_RS00775 739dfa0da1e2e397f32eeade34494313 363 SUPERFAMILY SSF52440 4 87 8.78E-27 T 25-04-2016 IPR016185 Pre-ATP-grasp domain SMA_RS07620 67949eb6de8bc694736b6069c4faae38 136 Gene3D G3DSA:3.90.79.10 6 134 7.0E-20 T 25-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SMA_RS07620 67949eb6de8bc694736b6069c4faae38 136 Pfam PF00293 NUDIX domain 16 115 1.9E-12 T 25-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 SMA_RS07620 67949eb6de8bc694736b6069c4faae38 136 SUPERFAMILY SSF55811 7 115 1.76E-18 T 25-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SMA_RS10330 879d1a59df17d22bb7c41c5a8b8d2485 203 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 201 2.9E-77 T 25-04-2016 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 SMA_RS10330 879d1a59df17d22bb7c41c5a8b8d2485 203 Pfam PF01479 S4 domain 93 140 1.7E-22 T 25-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SMA_RS10330 879d1a59df17d22bb7c41c5a8b8d2485 203 Gene3D G3DSA:1.10.1050.10 1 96 9.0E-38 T 25-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 SMA_RS10330 879d1a59df17d22bb7c41c5a8b8d2485 203 SMART SM01390 3 92 2.6E-41 T 25-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 SMA_RS10330 879d1a59df17d22bb7c41c5a8b8d2485 203 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 201 35.114 T 25-04-2016 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 SMA_RS10330 879d1a59df17d22bb7c41c5a8b8d2485 203 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 92 2.3E-24 T 25-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 SMA_RS10330 879d1a59df17d22bb7c41c5a8b8d2485 203 SMART SM00363 93 157 1.5E-20 T 25-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SMA_RS10330 879d1a59df17d22bb7c41c5a8b8d2485 203 PANTHER PTHR11831 1 199 1.5E-84 T 25-04-2016 IPR022801 Ribosomal protein S4/S9 SMA_RS10330 879d1a59df17d22bb7c41c5a8b8d2485 203 SUPERFAMILY SSF55174 3 201 2.09E-67 T 25-04-2016 SMA_RS10330 879d1a59df17d22bb7c41c5a8b8d2485 203 PANTHER PTHR11831:SF4 1 199 1.5E-84 T 25-04-2016 SMA_RS10330 879d1a59df17d22bb7c41c5a8b8d2485 203 ProSitePatterns PS00632 Ribosomal protein S4 signature. 91 115 - T 25-04-2016 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 SMA_RS10330 879d1a59df17d22bb7c41c5a8b8d2485 203 Gene3D G3DSA:3.10.290.10 97 192 5.9E-35 T 25-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SMA_RS06660 505e0605a2792bd6312267c12fba9ae3 143 Gene3D G3DSA:3.40.50.620 6 143 2.6E-43 T 25-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SMA_RS06660 505e0605a2792bd6312267c12fba9ae3 143 SUPERFAMILY SSF52402 6 143 9.77E-27 T 25-04-2016 SMA_RS06660 505e0605a2792bd6312267c12fba9ae3 143 PRINTS PR01438 Universal stress protein signature 104 116 1.3E-5 T 25-04-2016 IPR006015 Universal stress protein A SMA_RS06660 505e0605a2792bd6312267c12fba9ae3 143 PRINTS PR01438 Universal stress protein signature 121 143 1.3E-5 T 25-04-2016 IPR006015 Universal stress protein A SMA_RS06660 505e0605a2792bd6312267c12fba9ae3 143 PRINTS PR01438 Universal stress protein signature 5 23 1.3E-5 T 25-04-2016 IPR006015 Universal stress protein A SMA_RS06660 505e0605a2792bd6312267c12fba9ae3 143 PANTHER PTHR31964 1 143 2.9E-26 T 25-04-2016 SMA_RS06660 505e0605a2792bd6312267c12fba9ae3 143 Pfam PF00582 Universal stress protein family 6 143 2.4E-27 T 25-04-2016 IPR006016 UspA GO:0006950 SMA_RS05720 04e2d470e420895ff68eed440234b350 310 SUPERFAMILY SSF53613 1 286 5.46E-67 T 25-04-2016 IPR029056 Ribokinase-like SMA_RS05720 04e2d470e420895ff68eed440234b350 310 Pfam PF00294 pfkB family carbohydrate kinase 9 291 1.8E-59 T 25-04-2016 IPR011611 Carbohydrate kinase PfkB SMA_RS05720 04e2d470e420895ff68eed440234b350 310 Gene3D G3DSA:3.40.1190.20 35 309 2.2E-78 T 25-04-2016 IPR029056 Ribokinase-like SMA_RS05720 04e2d470e420895ff68eed440234b350 310 Hamap MF_01557 Tagatose-6-phosphate kinase [lacC]. 1 310 59.413 T 25-04-2016 IPR005926 Tagatose-6-phosphate kinase GO:0009024|GO:0019512 KEGG: 00052+2.7.1.144|KEGG: 00710+2.7.1.14|MetaCyc: PWY-7077|MetaCyc: PWY-7395|UniPathway: UPA00704 SMA_RS05720 04e2d470e420895ff68eed440234b350 310 TIGRFAM TIGR03168 1-PFK: hexose kinase, 1-phosphofructokinase family 2 308 4.5E-95 T 25-04-2016 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 SMA_RS05720 04e2d470e420895ff68eed440234b350 310 PIRSF PIRSF000535 1 310 1.5E-129 T 25-04-2016 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 SMA_RS05720 04e2d470e420895ff68eed440234b350 310 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 36 60 - T 25-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 SMA_RS05720 04e2d470e420895ff68eed440234b350 310 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 248 261 - T 25-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 SMA_RS05720 04e2d470e420895ff68eed440234b350 310 Gene3D G3DSA:2.20.150.10 9 34 7.3E-6 T 25-04-2016 IPR023314 Tagatose-6-phosphate kinase/1-phosphofructokinase N-terminal domain KEGG: 00052+2.7.1.144|KEGG: 00710+2.7.1.14|MetaCyc: PWY-7077|MetaCyc: PWY-7395|UniPathway: UPA00704 SMA_RS05720 04e2d470e420895ff68eed440234b350 310 PANTHER PTHR10584:SF178 1 310 1.9E-155 T 25-04-2016 SMA_RS05720 04e2d470e420895ff68eed440234b350 310 PANTHER PTHR10584 1 310 1.9E-155 T 25-04-2016 SMA_RS05720 04e2d470e420895ff68eed440234b350 310 TIGRFAM TIGR01231 lacC: tagatose-6-phosphate kinase 1 310 6.3E-167 T 25-04-2016 IPR005926 Tagatose-6-phosphate kinase GO:0009024|GO:0019512 KEGG: 00052+2.7.1.144|KEGG: 00710+2.7.1.14|MetaCyc: PWY-7077|MetaCyc: PWY-7395|UniPathway: UPA00704 SMA_RS05585 03dad211708e9d63600bdf7ee546de5d 384 SUPERFAMILY SSF50331 240 345 6.23E-12 T 25-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal SMA_RS05585 03dad211708e9d63600bdf7ee546de5d 384 Gene3D G3DSA:3.40.50.300 3 238 4.5E-81 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS05585 03dad211708e9d63600bdf7ee546de5d 384 Pfam PF00005 ABC transporter 23 165 2.6E-36 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMA_RS05585 03dad211708e9d63600bdf7ee546de5d 384 PANTHER PTHR24220:SF150 7 381 2.0E-175 T 25-04-2016 SMA_RS05585 03dad211708e9d63600bdf7ee546de5d 384 PANTHER PTHR24220 7 381 2.0E-175 T 25-04-2016 SMA_RS05585 03dad211708e9d63600bdf7ee546de5d 384 SMART SM00382 32 215 3.2E-16 T 25-04-2016 IPR003593 AAA+ ATPase domain SMA_RS05585 03dad211708e9d63600bdf7ee546de5d 384 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SMA_RS05585 03dad211708e9d63600bdf7ee546de5d 384 Pfam PF08402 TOBE domain 276 344 5.1E-5 T 25-04-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 SMA_RS05585 03dad211708e9d63600bdf7ee546de5d 384 SUPERFAMILY SSF52540 5 248 1.64E-84 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS03745 8324f4e63dfd78f334dcd78df6eb6a6f 69 SUPERFAMILY SSF81333 6 67 4.45E-14 T 25-04-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 SMA_RS03745 8324f4e63dfd78f334dcd78df6eb6a6f 69 Hamap MF_01396 ATP synthase subunit c [atpH]. 1 69 12.919 T 25-04-2016 SMA_RS03745 8324f4e63dfd78f334dcd78df6eb6a6f 69 Pfam PF00137 ATP synthase subunit C 5 64 5.9E-8 T 25-04-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 SMA_RS03745 8324f4e63dfd78f334dcd78df6eb6a6f 69 PRINTS PR00124 ATP synthase C subunit signature 42 67 7.4E-8 T 25-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 SMA_RS03745 8324f4e63dfd78f334dcd78df6eb6a6f 69 PRINTS PR00124 ATP synthase C subunit signature 25 40 7.4E-8 T 25-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 SMA_RS03745 8324f4e63dfd78f334dcd78df6eb6a6f 69 PRINTS PR00124 ATP synthase C subunit signature 4 23 7.4E-8 T 25-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 SMA_RS03745 8324f4e63dfd78f334dcd78df6eb6a6f 69 ProSitePatterns PS00605 ATP synthase c subunit signature. 32 53 - T 25-04-2016 IPR020537 ATPase, F0 complex, subunit C, DCCD-binding site SMA_RS03745 8324f4e63dfd78f334dcd78df6eb6a6f 69 Gene3D G3DSA:1.20.20.10 5 66 3.0E-19 T 25-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 SMA_RS02655 3199c39369ffff5b8fb4f77f8c0e60fc 75 ProSitePatterns PS01047 Heavy-metal-associated domain. 8 37 - T 25-04-2016 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 SMA_RS02655 3199c39369ffff5b8fb4f77f8c0e60fc 75 SUPERFAMILY SSF55008 1 71 3.14E-14 T 25-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 SMA_RS02655 3199c39369ffff5b8fb4f77f8c0e60fc 75 Pfam PF00403 Heavy-metal-associated domain 6 68 1.5E-13 T 25-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 SMA_RS02655 3199c39369ffff5b8fb4f77f8c0e60fc 75 Gene3D G3DSA:3.30.70.100 1 73 1.4E-16 T 25-04-2016 SMA_RS06045 cbac002f869d1dec1bcd3bd722fa8a51 237 PIRSF PIRSF000370 6 237 2.4E-49 T 25-04-2016 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703|UniPathway: UPA00391 SMA_RS06045 cbac002f869d1dec1bcd3bd722fa8a51 237 TIGRFAM TIGR03365 Bsubt_queE: 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE 7 237 2.6E-100 T 25-04-2016 IPR017742 7-carboxy-7-deazaguanine synthase KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703|UniPathway: UPA00391 SMA_RS06045 cbac002f869d1dec1bcd3bd722fa8a51 237 Gene3D G3DSA:3.20.20.70 22 124 8.6E-15 T 25-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SMA_RS06045 cbac002f869d1dec1bcd3bd722fa8a51 237 Pfam PF13394 4Fe-4S single cluster domain 30 111 6.0E-10 T 25-04-2016 SMA_RS06045 cbac002f869d1dec1bcd3bd722fa8a51 237 PANTHER PTHR11228:SF6 1 227 2.1E-41 T 25-04-2016 SMA_RS06045 cbac002f869d1dec1bcd3bd722fa8a51 237 PANTHER PTHR11228 1 227 2.1E-41 T 25-04-2016 SMA_RS06045 cbac002f869d1dec1bcd3bd722fa8a51 237 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 8 234 32.69 T 25-04-2016 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703|UniPathway: UPA00391 SMA_RS06045 cbac002f869d1dec1bcd3bd722fa8a51 237 SUPERFAMILY SSF102114 30 117 6.15E-14 T 25-04-2016 SMA_RS06045 cbac002f869d1dec1bcd3bd722fa8a51 237 Pfam PF04055 Radical SAM superfamily 32 127 1.6E-11 T 25-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 SMA_RS06530 7d6e08a406b58b13bb7e60371d966ade 273 PANTHER PTHR30614 32 264 5.6E-65 T 25-04-2016 SMA_RS06530 7d6e08a406b58b13bb7e60371d966ade 273 Gene3D G3DSA:3.40.190.10 120 212 7.7E-21 T 25-04-2016 SMA_RS06530 7d6e08a406b58b13bb7e60371d966ade 273 PANTHER PTHR30614:SF15 32 264 5.6E-65 T 25-04-2016 SMA_RS06530 7d6e08a406b58b13bb7e60371d966ade 273 Gene3D G3DSA:3.40.190.10 36 119 1.3E-36 T 25-04-2016 SMA_RS06530 7d6e08a406b58b13bb7e60371d966ade 273 Gene3D G3DSA:3.40.190.10 224 258 1.3E-36 T 25-04-2016 SMA_RS06530 7d6e08a406b58b13bb7e60371d966ade 273 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 40 257 7.6E-53 T 25-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SMA_RS06530 7d6e08a406b58b13bb7e60371d966ade 273 SUPERFAMILY SSF53850 4 257 1.17E-61 T 25-04-2016 SMA_RS06530 7d6e08a406b58b13bb7e60371d966ade 273 SMART SM00062 39 261 1.3E-47 T 25-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SMA_RS01165 d73ea55b5bfb4f48bbb2874651dbb6e4 739 PANTHER PTHR21262:SF0 1 739 0.0 T 25-04-2016 SMA_RS01165 d73ea55b5bfb4f48bbb2874651dbb6e4 739 Pfam PF02824 TGS domain 395 454 1.0E-21 T 25-04-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 SMA_RS01165 d73ea55b5bfb4f48bbb2874651dbb6e4 739 SUPERFAMILY SSF55021 661 736 7.08E-9 T 25-04-2016 SMA_RS01165 d73ea55b5bfb4f48bbb2874651dbb6e4 739 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 31 736 1.5E-239 T 25-04-2016 IPR004811 RelA/SpoT family GO:0015969 SMA_RS01165 d73ea55b5bfb4f48bbb2874651dbb6e4 739 SUPERFAMILY SSF109604 9 196 5.65E-77 T 25-04-2016 SMA_RS01165 d73ea55b5bfb4f48bbb2874651dbb6e4 739 SUPERFAMILY SSF81301 199 370 1.16E-63 T 25-04-2016 SMA_RS01165 d73ea55b5bfb4f48bbb2874651dbb6e4 739 Pfam PF04607 Region found in RelA / SpoT proteins 240 348 8.0E-37 T 25-04-2016 IPR007685 RelA/SpoT GO:0015969 SMA_RS01165 d73ea55b5bfb4f48bbb2874651dbb6e4 739 SUPERFAMILY SSF81271 382 455 1.09E-20 T 25-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 SMA_RS01165 d73ea55b5bfb4f48bbb2874651dbb6e4 739 Pfam PF13291 ACT domain 658 736 9.1E-19 T 25-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 SMA_RS01165 d73ea55b5bfb4f48bbb2874651dbb6e4 739 Gene3D G3DSA:3.10.20.30 394 455 1.8E-22 T 25-04-2016 IPR012675 Beta-grasp domain SMA_RS01165 d73ea55b5bfb4f48bbb2874651dbb6e4 739 SMART SM00471 46 158 7.2E-9 T 25-04-2016 IPR003607 HD/PDEase domain SMA_RS01165 d73ea55b5bfb4f48bbb2874651dbb6e4 739 PANTHER PTHR21262 1 739 0.0 T 25-04-2016 SMA_RS01165 d73ea55b5bfb4f48bbb2874651dbb6e4 739 Gene3D G3DSA:3.30.460.10 199 329 2.1E-48 T 25-04-2016 SMA_RS01165 d73ea55b5bfb4f48bbb2874651dbb6e4 739 Pfam PF13328 HD domain 31 180 2.4E-49 T 25-04-2016 IPR003607 HD/PDEase domain SMA_RS01165 d73ea55b5bfb4f48bbb2874651dbb6e4 739 SMART SM00954 240 349 4.3E-62 T 25-04-2016 IPR007685 RelA/SpoT GO:0015969 SMA_RS01165 d73ea55b5bfb4f48bbb2874651dbb6e4 739 Gene3D G3DSA:3.30.70.260 661 735 1.1E-10 T 25-04-2016 SMA_RS06615 39efc53fad3ef9fb95a78443e5f0632d 242 SMART SM00363 1 59 3.7E-9 T 25-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SMA_RS06615 39efc53fad3ef9fb95a78443e5f0632d 242 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 66 229 9.9E-48 T 25-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 SMA_RS06615 39efc53fad3ef9fb95a78443e5f0632d 242 PANTHER PTHR21600 1 241 1.4E-66 T 25-04-2016 SMA_RS06615 39efc53fad3ef9fb95a78443e5f0632d 242 SUPERFAMILY SSF55120 50 235 1.52E-45 T 25-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 SMA_RS06615 39efc53fad3ef9fb95a78443e5f0632d 242 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 100 114 - T 25-04-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 SMA_RS06615 39efc53fad3ef9fb95a78443e5f0632d 242 Pfam PF00849 RNA pseudouridylate synthase 62 197 5.8E-21 T 25-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 SMA_RS06615 39efc53fad3ef9fb95a78443e5f0632d 242 SUPERFAMILY SSF55174 1 58 1.2E-12 T 25-04-2016 SMA_RS06615 39efc53fad3ef9fb95a78443e5f0632d 242 Pfam PF01479 S4 domain 1 43 4.5E-11 T 25-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SMA_RS06615 39efc53fad3ef9fb95a78443e5f0632d 242 PANTHER PTHR21600:SF19 1 241 1.4E-66 T 25-04-2016 SMA_RS06615 39efc53fad3ef9fb95a78443e5f0632d 242 Gene3D G3DSA:3.10.290.10 1 64 1.4E-20 T 25-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SMA_RS09030 15ebf036ed9f1e6483412bd56efca7e1 281 PANTHER PTHR19139:SF147 9 168 2.4E-66 T 25-04-2016 SMA_RS09030 15ebf036ed9f1e6483412bd56efca7e1 281 PANTHER PTHR19139:SF147 189 279 2.4E-66 T 25-04-2016 SMA_RS09030 15ebf036ed9f1e6483412bd56efca7e1 281 Pfam PF00230 Major intrinsic protein 7 169 4.9E-29 T 25-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 SMA_RS09030 15ebf036ed9f1e6483412bd56efca7e1 281 Pfam PF00230 Major intrinsic protein 195 273 3.5E-10 T 25-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 SMA_RS09030 15ebf036ed9f1e6483412bd56efca7e1 281 SUPERFAMILY SSF81338 195 280 1.7E-60 T 25-04-2016 IPR023271 Aquaporin-like SMA_RS09030 15ebf036ed9f1e6483412bd56efca7e1 281 SUPERFAMILY SSF81338 5 169 1.7E-60 T 25-04-2016 IPR023271 Aquaporin-like SMA_RS09030 15ebf036ed9f1e6483412bd56efca7e1 281 Gene3D G3DSA:1.20.1080.10 3 280 1.1E-78 T 25-04-2016 IPR023271 Aquaporin-like SMA_RS09030 15ebf036ed9f1e6483412bd56efca7e1 281 ProSitePatterns PS00221 MIP family signature. 67 75 - T 25-04-2016 IPR022357 Major intrinsic protein, conserved site GO:0005215|GO:0006810|GO:0016020 SMA_RS09030 15ebf036ed9f1e6483412bd56efca7e1 281 PANTHER PTHR19139 9 168 2.4E-66 T 25-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 SMA_RS09030 15ebf036ed9f1e6483412bd56efca7e1 281 PANTHER PTHR19139 189 279 2.4E-66 T 25-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 SMA_RS09030 15ebf036ed9f1e6483412bd56efca7e1 281 PRINTS PR00783 Major intrinsic protein family signature 259 279 2.0E-39 T 25-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 SMA_RS09030 15ebf036ed9f1e6483412bd56efca7e1 281 PRINTS PR00783 Major intrinsic protein family signature 150 168 2.0E-39 T 25-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 SMA_RS09030 15ebf036ed9f1e6483412bd56efca7e1 281 PRINTS PR00783 Major intrinsic protein family signature 208 230 2.0E-39 T 25-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 SMA_RS09030 15ebf036ed9f1e6483412bd56efca7e1 281 PRINTS PR00783 Major intrinsic protein family signature 49 73 2.0E-39 T 25-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 SMA_RS09030 15ebf036ed9f1e6483412bd56efca7e1 281 PRINTS PR00783 Major intrinsic protein family signature 7 26 2.0E-39 T 25-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 SMA_RS09030 15ebf036ed9f1e6483412bd56efca7e1 281 PRINTS PR00783 Major intrinsic protein family signature 86 105 2.0E-39 T 25-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 SMA_RS05325 87a31d4c9bb4cc73eb1c1185abc39e06 295 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 82 291 5.3E-36 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SMA_RS05325 87a31d4c9bb4cc73eb1c1185abc39e06 295 SUPERFAMILY SSF161098 15 277 4.84E-38 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SMA_RS05325 87a31d4c9bb4cc73eb1c1185abc39e06 295 Gene3D G3DSA:1.10.3720.10 59 288 1.2E-43 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SMA_RS05325 87a31d4c9bb4cc73eb1c1185abc39e06 295 PANTHER PTHR30425 1 294 1.7E-113 T 25-04-2016 SMA_RS05325 87a31d4c9bb4cc73eb1c1185abc39e06 295 PANTHER PTHR30425:SF0 1 294 1.7E-113 T 25-04-2016 SMA_RS05325 87a31d4c9bb4cc73eb1c1185abc39e06 295 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 8 287 1.8E-79 T 25-04-2016 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 SMA_RS07290 75674354798a097fc7151adee243769c 448 TIGRFAM TIGR00457 asnS: asparagine--tRNA ligase 10 447 1.7E-142 T 25-04-2016 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22|Reactome: REACT_71 SMA_RS07290 75674354798a097fc7151adee243769c 448 PANTHER PTHR22594 6 448 1.6E-185 T 25-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SMA_RS07290 75674354798a097fc7151adee243769c 448 SUPERFAMILY SSF55681 121 443 8.92E-89 T 25-04-2016 SMA_RS07290 75674354798a097fc7151adee243769c 448 Pfam PF00152 tRNA synthetases class II (D, K and N) 122 442 4.2E-79 T 25-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SMA_RS07290 75674354798a097fc7151adee243769c 448 SUPERFAMILY SSF50249 12 113 7.35E-19 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMA_RS07290 75674354798a097fc7151adee243769c 448 Gene3D G3DSA:3.30.930.10 113 447 1.2E-106 T 25-04-2016 SMA_RS07290 75674354798a097fc7151adee243769c 448 Pfam PF01336 OB-fold nucleic acid binding domain 19 106 4.3E-14 T 25-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 SMA_RS07290 75674354798a097fc7151adee243769c 448 PANTHER PTHR22594:SF16 6 448 1.6E-185 T 25-04-2016 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22|Reactome: REACT_71 SMA_RS07290 75674354798a097fc7151adee243769c 448 PRINTS PR01042 Aspartyl-tRNA synthetase signature 207 220 1.8E-14 T 25-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SMA_RS07290 75674354798a097fc7151adee243769c 448 PRINTS PR01042 Aspartyl-tRNA synthetase signature 403 417 1.8E-14 T 25-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SMA_RS07290 75674354798a097fc7151adee243769c 448 PRINTS PR01042 Aspartyl-tRNA synthetase signature 191 203 1.8E-14 T 25-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SMA_RS07290 75674354798a097fc7151adee243769c 448 PRINTS PR01042 Aspartyl-tRNA synthetase signature 363 379 1.8E-14 T 25-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SMA_RS07290 75674354798a097fc7151adee243769c 448 Hamap MF_00534 Asparagine--tRNA ligase [asnS]. 4 448 39.824 T 25-04-2016 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22|Reactome: REACT_71 SMA_RS07290 75674354798a097fc7151adee243769c 448 Gene3D G3DSA:2.40.50.140 10 112 3.9E-25 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMA_RS10370 19b5c25553023c2176c0bcb0b7d91721 290 PANTHER PTHR30182 1 289 1.5E-130 T 25-04-2016 SMA_RS10370 19b5c25553023c2176c0bcb0b7d91721 290 TIGRFAM TIGR00718 sda_alpha: L-serine dehydratase, iron-sulfur-dependent, alpha subunit 1 289 3.0E-109 T 25-04-2016 IPR004642 Serine dehydratase, alpha subunit GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17|UniPathway: UPA00138 SMA_RS10370 19b5c25553023c2176c0bcb0b7d91721 290 Pfam PF03313 Serine dehydratase alpha chain 19 275 2.3E-72 T 25-04-2016 IPR005130 Serine dehydratase-like, alpha subunit SMA_RS10480 efaef1d57b723070cef1ca16ea304037 288 SUPERFAMILY SSF103481 36 131 6.8E-9 T 25-04-2016 SMA_RS10480 efaef1d57b723070cef1ca16ea304037 288 PANTHER PTHR16119:SF19 4 287 7.5E-72 T 25-04-2016 SMA_RS10480 efaef1d57b723070cef1ca16ea304037 288 Pfam PF06800 Sugar transport protein 5 285 2.1E-105 T 25-04-2016 IPR010651 Sugar transport protein GO:0015144|GO:0016021|GO:0034219 SMA_RS10480 efaef1d57b723070cef1ca16ea304037 288 PANTHER PTHR16119 4 287 7.5E-72 T 25-04-2016 SMA_RS08130 7aac73f9d6474cb02ea369e585731fd7 387 Pfam PF00155 Aminotransferase class I and II 29 381 7.7E-46 T 25-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 SMA_RS08130 7aac73f9d6474cb02ea369e585731fd7 387 SUPERFAMILY SSF53383 15 386 1.45E-94 T 25-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SMA_RS08130 7aac73f9d6474cb02ea369e585731fd7 387 Gene3D G3DSA:3.40.640.10 42 251 9.8E-50 T 25-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SMA_RS08130 7aac73f9d6474cb02ea369e585731fd7 387 TIGRFAM TIGR04350 C_S_lyase_PatB: putative C-S lyase 10 384 4.8E-119 T 25-04-2016 IPR027619 Putative C-S lyase KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8|MetaCyc: PWY-6936 SMA_RS08130 7aac73f9d6474cb02ea369e585731fd7 387 PANTHER PTHR11751:SF21 5 384 1.2E-119 T 25-04-2016 SMA_RS08130 7aac73f9d6474cb02ea369e585731fd7 387 Gene3D G3DSA:3.90.1150.10 252 386 6.1E-38 T 25-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SMA_RS08130 7aac73f9d6474cb02ea369e585731fd7 387 PANTHER PTHR11751 5 384 1.2E-119 T 25-04-2016 SMA_RS08030 27f0ae328a7c5c1cb51ec2108bcd66bd 212 Gene3D G3DSA:3.20.20.380 1 208 5.6E-72 T 25-04-2016 IPR023648 Copper homeostasis CutC domain GO:0005507|GO:0055070 SMA_RS08030 27f0ae328a7c5c1cb51ec2108bcd66bd 212 Pfam PF03932 CutC family 3 208 3.1E-76 T 25-04-2016 IPR005627 Copper homeostasis protein CutC GO:0005507|GO:0055070 SMA_RS08030 27f0ae328a7c5c1cb51ec2108bcd66bd 212 PANTHER PTHR12598 23 206 4.8E-65 T 25-04-2016 IPR005627 Copper homeostasis protein CutC GO:0005507|GO:0055070 SMA_RS08030 27f0ae328a7c5c1cb51ec2108bcd66bd 212 PANTHER PTHR12598:SF0 23 206 4.8E-65 T 25-04-2016 SMA_RS08030 27f0ae328a7c5c1cb51ec2108bcd66bd 212 SUPERFAMILY SSF110395 4 207 5.62E-55 T 25-04-2016 IPR023648 Copper homeostasis CutC domain GO:0005507|GO:0055070 SMA_RS07850 5d40aec8b42fd11881f7bdd4b6be522e 169 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 1 160 35.898 T 25-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 SMA_RS07850 5d40aec8b42fd11881f7bdd4b6be522e 169 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 2 153 3.9E-60 T 25-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 SMA_RS07850 5d40aec8b42fd11881f7bdd4b6be522e 169 PANTHER PTHR10173 1 151 1.6E-62 T 25-04-2016 IPR028427 Peptide methionine sulfoxide reductase GO:0006979|GO:0016671|GO:0030091 SMA_RS07850 5d40aec8b42fd11881f7bdd4b6be522e 169 Gene3D G3DSA:3.30.1060.10 1 153 1.6E-67 T 25-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 SMA_RS07850 5d40aec8b42fd11881f7bdd4b6be522e 169 SUPERFAMILY SSF55068 1 155 6.15E-67 T 25-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 SMA_RS07850 5d40aec8b42fd11881f7bdd4b6be522e 169 PANTHER PTHR10173:SF6 1 151 1.6E-62 T 25-04-2016 SMA_RS07850 5d40aec8b42fd11881f7bdd4b6be522e 169 Pfam PF01625 Peptide methionine sulfoxide reductase 4 154 6.2E-60 T 25-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 SMA_RS09970 7b6900c2575083650c3f4107bb9c26f8 178 ProDom PD022010 DECARBOXYLASE ACID PHENOLIC P-COUMARIC LYASE 4.1.1.- PAD PADC FERULATE PROBABLE 8 167 3.0E-83 T 25-04-2016 IPR008729 Phenolic acid decarboxylase, bacterial GO:0016831 KEGG: 00053+4.1.1.-|KEGG: 00230+4.1.1.-|KEGG: 00261+4.1.1.-|KEGG: 00350+4.1.1.-|KEGG: 00351+4.1.1.-|KEGG: 00360+4.1.1.-|KEGG: 00362+4.1.1.-|KEGG: 00380+4.1.1.-|KEGG: 00620+4.1.1.-|KEGG: 00621+4.1.1.-|KEGG: 00622+4.1.1.-|KEGG: 00624+4.1.1.-|KEGG: 00625+4.1.1.-|KEGG: 00626+4.1.1.-|KEGG: 00940+4.1.1.- SMA_RS09970 7b6900c2575083650c3f4107bb9c26f8 178 PANTHER PTHR40087 8 167 4.1E-69 T 25-04-2016 SMA_RS09970 7b6900c2575083650c3f4107bb9c26f8 178 PANTHER PTHR40087:SF1 8 167 4.1E-69 T 25-04-2016 SMA_RS09970 7b6900c2575083650c3f4107bb9c26f8 178 Gene3D G3DSA:2.40.128.20 8 167 5.2E-80 T 25-04-2016 IPR012674 Calycin SMA_RS09970 7b6900c2575083650c3f4107bb9c26f8 178 Pfam PF05870 Phenolic acid decarboxylase (PAD) 8 165 2.5E-79 T 25-04-2016 IPR008729 Phenolic acid decarboxylase, bacterial GO:0016831 KEGG: 00053+4.1.1.-|KEGG: 00230+4.1.1.-|KEGG: 00261+4.1.1.-|KEGG: 00350+4.1.1.-|KEGG: 00351+4.1.1.-|KEGG: 00360+4.1.1.-|KEGG: 00362+4.1.1.-|KEGG: 00380+4.1.1.-|KEGG: 00620+4.1.1.-|KEGG: 00621+4.1.1.-|KEGG: 00622+4.1.1.-|KEGG: 00624+4.1.1.-|KEGG: 00625+4.1.1.-|KEGG: 00626+4.1.1.-|KEGG: 00940+4.1.1.- SMA_RS09970 7b6900c2575083650c3f4107bb9c26f8 178 SUPERFAMILY SSF50814 3 177 1.9E-79 T 25-04-2016 IPR011038 Calycin-like SMA_RS09970 7b6900c2575083650c3f4107bb9c26f8 178 PIRSF PIRSF011561 1 178 4.3E-105 T 25-04-2016 IPR008729 Phenolic acid decarboxylase, bacterial GO:0016831 KEGG: 00053+4.1.1.-|KEGG: 00230+4.1.1.-|KEGG: 00261+4.1.1.-|KEGG: 00350+4.1.1.-|KEGG: 00351+4.1.1.-|KEGG: 00360+4.1.1.-|KEGG: 00362+4.1.1.-|KEGG: 00380+4.1.1.-|KEGG: 00620+4.1.1.-|KEGG: 00621+4.1.1.-|KEGG: 00622+4.1.1.-|KEGG: 00624+4.1.1.-|KEGG: 00625+4.1.1.-|KEGG: 00626+4.1.1.-|KEGG: 00940+4.1.1.- SMA_RS10500 66efe077ce75a3ebd711cd6c1c3a0f1b 540 PANTHER PTHR19211:SF38 2 534 0.0 T 25-04-2016 SMA_RS10500 66efe077ce75a3ebd711cd6c1c3a0f1b 540 SUPERFAMILY SSF52540 7 236 3.07E-45 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS10500 66efe077ce75a3ebd711cd6c1c3a0f1b 540 PANTHER PTHR19211 2 534 0.0 T 25-04-2016 SMA_RS10500 66efe077ce75a3ebd711cd6c1c3a0f1b 540 Pfam PF00005 ABC transporter 18 184 6.4E-23 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMA_RS10500 66efe077ce75a3ebd711cd6c1c3a0f1b 540 Pfam PF00005 ABC transporter 335 467 6.6E-12 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMA_RS10500 66efe077ce75a3ebd711cd6c1c3a0f1b 540 Pfam PF12848 ABC transporter 224 304 2.6E-20 T 25-04-2016 IPR032781 ABC-transporter extension domain SMA_RS10500 66efe077ce75a3ebd711cd6c1c3a0f1b 540 SUPERFAMILY SSF52540 294 514 1.35E-33 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS10500 66efe077ce75a3ebd711cd6c1c3a0f1b 540 SMART SM00382 26 228 2.6E-12 T 25-04-2016 IPR003593 AAA+ ATPase domain SMA_RS10500 66efe077ce75a3ebd711cd6c1c3a0f1b 540 SMART SM00382 344 512 2.1 T 25-04-2016 IPR003593 AAA+ ATPase domain SMA_RS10500 66efe077ce75a3ebd711cd6c1c3a0f1b 540 Gene3D G3DSA:3.40.50.300 3 100 4.9E-50 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS10500 66efe077ce75a3ebd711cd6c1c3a0f1b 540 Gene3D G3DSA:3.40.50.300 132 281 4.9E-50 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS10500 66efe077ce75a3ebd711cd6c1c3a0f1b 540 ProSitePatterns PS00211 ABC transporters family signature. 439 453 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SMA_RS10500 66efe077ce75a3ebd711cd6c1c3a0f1b 540 Gene3D G3DSA:3.40.50.300 317 534 2.7E-33 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS00890 decc7bce07e3399ff6be56fb0d50529a 94 ProSitePatterns PS00681 Chaperonins cpn10 signature. 2 26 - T 25-04-2016 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 SMA_RS00890 decc7bce07e3399ff6be56fb0d50529a 94 PANTHER PTHR10772:SF0 2 94 1.9E-22 T 25-04-2016 SMA_RS00890 decc7bce07e3399ff6be56fb0d50529a 94 SUPERFAMILY SSF50129 1 93 3.3E-25 T 25-04-2016 IPR011032 GroES-like SMA_RS00890 decc7bce07e3399ff6be56fb0d50529a 94 PRINTS PR00297 10kDa chaperonin signature 24 45 5.1E-17 T 25-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 SMA_RS00890 decc7bce07e3399ff6be56fb0d50529a 94 PRINTS PR00297 10kDa chaperonin signature 59 71 5.1E-17 T 25-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 SMA_RS00890 decc7bce07e3399ff6be56fb0d50529a 94 PRINTS PR00297 10kDa chaperonin signature 80 93 5.1E-17 T 25-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 SMA_RS00890 decc7bce07e3399ff6be56fb0d50529a 94 PRINTS PR00297 10kDa chaperonin signature 2 17 5.1E-17 T 25-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 SMA_RS00890 decc7bce07e3399ff6be56fb0d50529a 94 SMART SM00883 1 93 5.9E-35 T 25-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 SMA_RS00890 decc7bce07e3399ff6be56fb0d50529a 94 Hamap MF_00580 10 kDa chaperonin [groS]. 1 94 18.854 T 25-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 SMA_RS00890 decc7bce07e3399ff6be56fb0d50529a 94 Pfam PF00166 Chaperonin 10 Kd subunit 2 92 2.7E-24 T 25-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 SMA_RS00890 decc7bce07e3399ff6be56fb0d50529a 94 PANTHER PTHR10772 2 94 1.9E-22 T 25-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 SMA_RS00890 decc7bce07e3399ff6be56fb0d50529a 94 Gene3D G3DSA:2.30.33.40 2 93 7.9E-26 T 25-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 SMA_RS04920 4cc7932640d08207c4768b7fc8350e02 928 SUPERFAMILY SSF52540 374 470 1.59E-5 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS04920 4cc7932640d08207c4768b7fc8350e02 928 SUPERFAMILY SSF52540 27 258 2.53E-14 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS04920 4cc7932640d08207c4768b7fc8350e02 928 SUPERFAMILY SSF52540 70 110 1.59E-5 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS04920 4cc7932640d08207c4768b7fc8350e02 928 Pfam PF04851 Type III restriction enzyme, res subunit 47 241 1.3E-27 T 25-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 SMA_RS04920 4cc7932640d08207c4768b7fc8350e02 928 Gene3D G3DSA:3.40.50.300 38 247 6.8E-16 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS04920 4cc7932640d08207c4768b7fc8350e02 928 SMART SM00487 44 265 0.0016 T 25-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain SMA_RS00440 21b9b188e487ce927b3b4c7f7db00a9d 434 SUPERFAMILY SSF103491 5 421 3.27E-118 T 25-04-2016 IPR023201 SecY subunit domain SMA_RS00440 21b9b188e487ce927b3b4c7f7db00a9d 434 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 16 426 1.5E-134 T 25-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 SMA_RS00440 21b9b188e487ce927b3b4c7f7db00a9d 434 Pfam PF00344 SecY translocase 69 412 2.8E-98 T 25-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 SMA_RS00440 21b9b188e487ce927b3b4c7f7db00a9d 434 PRINTS PR00303 Preprotein translocase SecY subunit signature 173 196 2.2E-90 T 25-04-2016 SMA_RS00440 21b9b188e487ce927b3b4c7f7db00a9d 434 PRINTS PR00303 Preprotein translocase SecY subunit signature 68 88 2.2E-90 T 25-04-2016 SMA_RS00440 21b9b188e487ce927b3b4c7f7db00a9d 434 PRINTS PR00303 Preprotein translocase SecY subunit signature 147 172 2.2E-90 T 25-04-2016 SMA_RS00440 21b9b188e487ce927b3b4c7f7db00a9d 434 PRINTS PR00303 Preprotein translocase SecY subunit signature 267 286 2.2E-90 T 25-04-2016 SMA_RS00440 21b9b188e487ce927b3b4c7f7db00a9d 434 PRINTS PR00303 Preprotein translocase SecY subunit signature 399 417 2.2E-90 T 25-04-2016 SMA_RS00440 21b9b188e487ce927b3b4c7f7db00a9d 434 PRINTS PR00303 Preprotein translocase SecY subunit signature 19 37 2.2E-90 T 25-04-2016 SMA_RS00440 21b9b188e487ce927b3b4c7f7db00a9d 434 PRINTS PR00303 Preprotein translocase SecY subunit signature 110 133 2.2E-90 T 25-04-2016 SMA_RS00440 21b9b188e487ce927b3b4c7f7db00a9d 434 PRINTS PR00303 Preprotein translocase SecY subunit signature 310 332 2.2E-90 T 25-04-2016 SMA_RS00440 21b9b188e487ce927b3b4c7f7db00a9d 434 PRINTS PR00303 Preprotein translocase SecY subunit signature 365 383 2.2E-90 T 25-04-2016 SMA_RS00440 21b9b188e487ce927b3b4c7f7db00a9d 434 Hamap MF_01465 Protein translocase subunit SecY [secY]. 6 430 27.119 T 25-04-2016 IPR026593 Protein translocase subunit SecY SMA_RS00440 21b9b188e487ce927b3b4c7f7db00a9d 434 Gene3D G3DSA:1.10.3370.10 6 433 9.7E-133 T 25-04-2016 IPR023201 SecY subunit domain SMA_RS00440 21b9b188e487ce927b3b4c7f7db00a9d 434 PANTHER PTHR10906 6 430 3.6E-172 T 25-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 SMA_RS00440 21b9b188e487ce927b3b4c7f7db00a9d 434 PANTHER PTHR10906:SF2 6 430 3.6E-172 T 25-04-2016 SMA_RS00440 21b9b188e487ce927b3b4c7f7db00a9d 434 PIRSF PIRSF004557 2 433 1.7E-117 T 25-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 SMA_RS00440 21b9b188e487ce927b3b4c7f7db00a9d 434 ProSitePatterns PS00755 Protein secY signature 1. 69 88 - T 25-04-2016 IPR030659 SecY conserved site SMA_RS03360 506637b563fd2a6f211f76c4e558dffb 203 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 4 178 3.2E-10 T 25-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SMA_RS03360 506637b563fd2a6f211f76c4e558dffb 203 PANTHER PTHR18901:SF14 1 178 1.7E-32 T 25-04-2016 SMA_RS03360 506637b563fd2a6f211f76c4e558dffb 203 Gene3D G3DSA:3.40.50.1000 3 194 7.1E-30 T 25-04-2016 IPR023214 HAD-like domain SMA_RS03360 506637b563fd2a6f211f76c4e558dffb 203 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 3 174 6.4E-12 T 25-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SMA_RS03360 506637b563fd2a6f211f76c4e558dffb 203 SUPERFAMILY SSF56784 3 198 2.67E-40 T 25-04-2016 IPR023214 HAD-like domain SMA_RS03360 506637b563fd2a6f211f76c4e558dffb 203 Pfam PF13419 Haloacid dehalogenase-like hydrolase 5 179 6.9E-31 T 25-04-2016 IPR023214 HAD-like domain SMA_RS03360 506637b563fd2a6f211f76c4e558dffb 203 PANTHER PTHR18901 1 178 1.7E-32 T 25-04-2016 SMA_RS07635 3db6eb37c9c620a13a9e55a898bd7701 269 PANTHER PTHR13754:SF15 1 267 1.6E-101 T 25-04-2016 SMA_RS07635 3db6eb37c9c620a13a9e55a898bd7701 269 SUPERFAMILY SSF56281 12 241 5.63E-44 T 25-04-2016 IPR001279 Metallo-beta-lactamase SMA_RS07635 3db6eb37c9c620a13a9e55a898bd7701 269 Gene3D G3DSA:3.60.15.10 10 256 4.8E-41 T 25-04-2016 IPR001279 Metallo-beta-lactamase SMA_RS07635 3db6eb37c9c620a13a9e55a898bd7701 269 SMART SM00849 16 196 1.4E-11 T 25-04-2016 IPR001279 Metallo-beta-lactamase SMA_RS07635 3db6eb37c9c620a13a9e55a898bd7701 269 Pfam PF00753 Metallo-beta-lactamase superfamily 15 223 1.4E-19 T 25-04-2016 IPR001279 Metallo-beta-lactamase SMA_RS07635 3db6eb37c9c620a13a9e55a898bd7701 269 PANTHER PTHR13754 1 267 1.6E-101 T 25-04-2016 SMA_RS09370 2eb63084e375c06b0d4dc09050b28cc3 312 Gene3D G3DSA:2.40.260.10 87 226 8.1E-52 T 25-04-2016 IPR023365 Sortase domain SMA_RS09370 2eb63084e375c06b0d4dc09050b28cc3 312 PANTHER PTHR33393:SF5 97 309 1.4E-27 T 25-04-2016 SMA_RS09370 2eb63084e375c06b0d4dc09050b28cc3 312 PANTHER PTHR33393 97 309 1.4E-27 T 25-04-2016 SMA_RS09370 2eb63084e375c06b0d4dc09050b28cc3 312 SUPERFAMILY SSF63817 87 226 3.4E-45 T 25-04-2016 IPR023365 Sortase domain SMA_RS09370 2eb63084e375c06b0d4dc09050b28cc3 312 TIGRFAM TIGR01076 sortase_fam: sortase 98 226 6.3E-51 T 25-04-2016 IPR005754 Sortase family SMA_RS09370 2eb63084e375c06b0d4dc09050b28cc3 312 Pfam PF04203 Sortase family 100 224 6.3E-24 T 25-04-2016 IPR005754 Sortase family SMA_RS04175 0058b944319c8094ff9f123cf9da9e67 216 SMART SM00471 23 137 1.1E-8 T 25-04-2016 IPR003607 HD/PDEase domain SMA_RS04175 0058b944319c8094ff9f123cf9da9e67 216 PANTHER PTHR33594 6 216 5.7E-76 T 25-04-2016 SMA_RS04175 0058b944319c8094ff9f123cf9da9e67 216 Pfam PF01966 HD domain 30 127 3.0E-9 T 25-04-2016 IPR006674 HD domain SMA_RS04175 0058b944319c8094ff9f123cf9da9e67 216 Gene3D G3DSA:1.10.3210.10 4 141 2.7E-47 T 25-04-2016 IPR006674 HD domain SMA_RS04175 0058b944319c8094ff9f123cf9da9e67 216 Gene3D G3DSA:1.10.3210.10 184 214 2.7E-47 T 25-04-2016 IPR006674 HD domain SMA_RS04175 0058b944319c8094ff9f123cf9da9e67 216 SUPERFAMILY SSF109604 4 215 1.6E-71 T 25-04-2016 SMA_RS04175 0058b944319c8094ff9f123cf9da9e67 216 PANTHER PTHR33594:SF1 6 216 5.7E-76 T 25-04-2016 SMA_RS00750 97da2d164ec319aa779ebff909a7e52b 211 PANTHER PTHR36435:SF1 5 211 3.8E-14 T 25-04-2016 SMA_RS00750 97da2d164ec319aa779ebff909a7e52b 211 Pfam PF02517 CAAX protease self-immunity 116 203 2.9E-17 T 25-04-2016 IPR003675 CAAX amino terminal protease GO:0016020 SMA_RS00750 97da2d164ec319aa779ebff909a7e52b 211 PANTHER PTHR36435 5 211 3.8E-14 T 25-04-2016 SMA_RS06315 8d64023bbb25ea08ee4e12eadd728a3b 355 SUPERFAMILY SSF56796 1 354 2.36E-107 T 25-04-2016 SMA_RS06315 8d64023bbb25ea08ee4e12eadd728a3b 355 PANTHER PTHR21090 1 355 5.8E-144 T 25-04-2016 SMA_RS06315 8d64023bbb25ea08ee4e12eadd728a3b 355 Gene3D G3DSA:3.40.50.1970 2 171 3.6E-64 T 25-04-2016 SMA_RS06315 8d64023bbb25ea08ee4e12eadd728a3b 355 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 1 355 38.357 T 25-04-2016 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 SMA_RS06315 8d64023bbb25ea08ee4e12eadd728a3b 355 PIRSF PIRSF001455 3 354 9.9E-104 T 25-04-2016 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 SMA_RS06315 8d64023bbb25ea08ee4e12eadd728a3b 355 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 12 351 1.8E-120 T 25-04-2016 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 SMA_RS06315 8d64023bbb25ea08ee4e12eadd728a3b 355 Pfam PF01761 3-dehydroquinate synthase 70 323 1.5E-99 T 25-04-2016 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 SMA_RS06315 8d64023bbb25ea08ee4e12eadd728a3b 355 Gene3D G3DSA:1.20.1090.10 174 354 2.0E-54 T 25-04-2016 SMA_RS03900 d496c402d90a7e4f30f6c5a965c1194e 172 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 3 170 37.918 T 25-04-2016 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|UniPathway: UPA00588 SMA_RS03900 d496c402d90a7e4f30f6c5a965c1194e 172 SUPERFAMILY SSF53271 2 167 1.38E-49 T 25-04-2016 IPR029057 Phosphoribosyltransferase-like SMA_RS03900 d496c402d90a7e4f30f6c5a965c1194e 172 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 3 169 3.1E-67 T 25-04-2016 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|UniPathway: UPA00588 SMA_RS03900 d496c402d90a7e4f30f6c5a965c1194e 172 Pfam PF00156 Phosphoribosyl transferase domain 37 164 1.1E-16 T 25-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 SMA_RS03900 d496c402d90a7e4f30f6c5a965c1194e 172 Gene3D G3DSA:3.40.50.2020 2 169 7.2E-65 T 25-04-2016 IPR029057 Phosphoribosyltransferase-like SMA_RS03900 d496c402d90a7e4f30f6c5a965c1194e 172 PANTHER PTHR11776 1 168 1.6E-76 T 25-04-2016 SMA_RS03900 d496c402d90a7e4f30f6c5a965c1194e 172 PANTHER PTHR11776:SF0 1 168 1.6E-76 T 25-04-2016 SMA_RS02215 267c9852547cd624fbf55b3989932c6a 100 Pfam PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 7 95 2.3E-15 T 25-04-2016 IPR004038 Ribosomal protein L7Ae/L30e/S12e/Gadd45 SMA_RS02215 267c9852547cd624fbf55b3989932c6a 100 SUPERFAMILY SSF55315 6 99 3.26E-24 T 25-04-2016 IPR029064 50S ribosomal protein L30e-like SMA_RS02215 267c9852547cd624fbf55b3989932c6a 100 Gene3D G3DSA:3.30.1330.30 4 97 1.4E-22 T 25-04-2016 IPR029064 50S ribosomal protein L30e-like SMA_RS10205 cffad4924ed56297d333cbff90d2570b 563 PANTHER PTHR11956:SF1 1 563 7.2E-238 T 25-04-2016 SMA_RS10205 cffad4924ed56297d333cbff90d2570b 563 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 5 563 2.5E-161 T 25-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 SMA_RS10205 cffad4924ed56297d333cbff90d2570b 563 Pfam PF05746 DALR anticodon binding domain 450 563 2.3E-32 T 25-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 SMA_RS10205 cffad4924ed56297d333cbff90d2570b 563 Gene3D G3DSA:3.30.1360.70 3 97 7.6E-30 T 25-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 SMA_RS10205 cffad4924ed56297d333cbff90d2570b 563 Pfam PF00750 tRNA synthetases class I (R) 95 435 2.8E-101 T 25-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 SMA_RS10205 cffad4924ed56297d333cbff90d2570b 563 SUPERFAMILY SSF47323 444 563 3.14E-33 T 25-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SMA_RS10205 cffad4924ed56297d333cbff90d2570b 563 SMART SM00836 450 563 1.7E-42 T 25-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 SMA_RS10205 cffad4924ed56297d333cbff90d2570b 563 SUPERFAMILY SSF55190 1 103 2.35E-25 T 25-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 SMA_RS10205 cffad4924ed56297d333cbff90d2570b 563 Gene3D G3DSA:3.40.50.620 107 443 2.3E-116 T 25-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SMA_RS10205 cffad4924ed56297d333cbff90d2570b 563 Hamap MF_00123 Arginine--tRNA ligase [argS]. 5 563 27.663 T 25-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 SMA_RS10205 cffad4924ed56297d333cbff90d2570b 563 PANTHER PTHR11956 1 563 7.2E-238 T 25-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 SMA_RS10205 cffad4924ed56297d333cbff90d2570b 563 Gene3D G3DSA:1.10.730.10 444 563 5.6E-37 T 25-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SMA_RS10205 cffad4924ed56297d333cbff90d2570b 563 SUPERFAMILY SSF52374 107 444 4.15E-100 T 25-04-2016 SMA_RS10205 cffad4924ed56297d333cbff90d2570b 563 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 4 83 3.9E-18 T 25-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 SMA_RS10205 cffad4924ed56297d333cbff90d2570b 563 SMART SM01016 5 83 8.6E-27 T 25-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 SMA_RS10205 cffad4924ed56297d333cbff90d2570b 563 PRINTS PR01038 Arginyl-tRNA synthetase signature 128 144 3.6E-21 T 25-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 SMA_RS10205 cffad4924ed56297d333cbff90d2570b 563 PRINTS PR01038 Arginyl-tRNA synthetase signature 152 165 3.6E-21 T 25-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 SMA_RS10205 cffad4924ed56297d333cbff90d2570b 563 PRINTS PR01038 Arginyl-tRNA synthetase signature 113 128 3.6E-21 T 25-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 SMA_RS10205 cffad4924ed56297d333cbff90d2570b 563 PRINTS PR01038 Arginyl-tRNA synthetase signature 297 318 3.6E-21 T 25-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 SMA_RS02325 4a9eb91430bce33fcca487302b9ed801 100 Pfam PF08951 Enterocin A Immunity 7 74 2.0E-12 T 25-04-2016 IPR015046 Enterocin A Immunity SMA_RS02325 4a9eb91430bce33fcca487302b9ed801 100 SUPERFAMILY SSF109797 1 93 5.23E-20 T 25-04-2016 SMA_RS02325 4a9eb91430bce33fcca487302b9ed801 100 Gene3D G3DSA:1.20.1440.50 3 79 3.6E-20 T 25-04-2016 IPR023130 Ta0600-like domain SMA_RS04835 77ed53ac5493f935e580e6fc2f6a841d 312 PANTHER PTHR30040:SF2 3 312 1.0E-90 T 25-04-2016 IPR024932 Flavin transferase ApbE GO:0017013 SMA_RS04835 77ed53ac5493f935e580e6fc2f6a841d 312 PIRSF PIRSF006268 1 311 1.0E-90 T 25-04-2016 IPR024932 Flavin transferase ApbE GO:0017013 SMA_RS04835 77ed53ac5493f935e580e6fc2f6a841d 312 Pfam PF02424 ApbE family 10 289 5.6E-70 T 25-04-2016 IPR024932 Flavin transferase ApbE GO:0017013 SMA_RS04835 77ed53ac5493f935e580e6fc2f6a841d 312 PANTHER PTHR30040 3 312 1.0E-90 T 25-04-2016 SMA_RS04835 77ed53ac5493f935e580e6fc2f6a841d 312 SUPERFAMILY SSF143631 3 307 2.22E-85 T 25-04-2016 IPR003374 ApbE-like domain SMA_RS00085 6cb07c58956cafa4a0c69d281d5ad588 157 PANTHER PTHR33498:SF1 1 137 5.5E-25 T 25-04-2016 SMA_RS00085 6cb07c58956cafa4a0c69d281d5ad588 157 PANTHER PTHR33498 1 137 5.5E-25 T 25-04-2016 SMA_RS00085 6cb07c58956cafa4a0c69d281d5ad588 157 Pfam PF01610 Transposase 1 150 2.9E-24 T 25-04-2016 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain SMA_RS08585 aea98695d08eeaba418100279f60aa96 238 Gene3D G3DSA:3.30.1270.10 81 131 2.2E-34 T 25-04-2016 IPR026563 Transcriptional regulator TACO1-like, domain 2 SMA_RS08585 aea98695d08eeaba418100279f60aa96 238 Gene3D G3DSA:3.30.1270.10 210 236 2.2E-34 T 25-04-2016 IPR026563 Transcriptional regulator TACO1-like, domain 2 SMA_RS08585 aea98695d08eeaba418100279f60aa96 238 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 1 237 31.043 T 25-04-2016 IPR002876 Transcriptional regulator TACO1-like SMA_RS08585 aea98695d08eeaba418100279f60aa96 238 Pfam PF01709 Transcriptional regulator 4 235 4.9E-81 T 25-04-2016 IPR002876 Transcriptional regulator TACO1-like SMA_RS08585 aea98695d08eeaba418100279f60aa96 238 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 1 235 3.2E-70 T 25-04-2016 IPR002876 Transcriptional regulator TACO1-like SMA_RS08585 aea98695d08eeaba418100279f60aa96 238 PANTHER PTHR12532:SF4 1 237 1.6E-149 T 25-04-2016 SMA_RS08585 aea98695d08eeaba418100279f60aa96 238 SUPERFAMILY SSF75625 1 235 5.1E-81 T 25-04-2016 IPR029072 YebC-like SMA_RS08585 aea98695d08eeaba418100279f60aa96 238 Gene3D G3DSA:3.30.70.980 132 202 1.4E-24 T 25-04-2016 IPR026564 Transcriptional regulator TACO1-like, domain 3 SMA_RS08585 aea98695d08eeaba418100279f60aa96 238 Hamap MF_00918 Probable transcriptional regulatory protein YeeN [yeeN]. 1 238 62.586 T 25-04-2016 IPR026562 Probable transcriptional regulatory protein YeeN SMA_RS08585 aea98695d08eeaba418100279f60aa96 238 Gene3D G3DSA:1.10.10.200 1 77 7.0E-29 T 25-04-2016 IPR017856 Integrase, N-terminal zinc-binding domain-like SMA_RS08585 aea98695d08eeaba418100279f60aa96 238 PANTHER PTHR12532 1 237 1.6E-149 T 25-04-2016 IPR002876 Transcriptional regulator TACO1-like SMA_RS08250 e0210ef190a00b2fb3e9351be439d2ff 189 PIRSF PIRSF037778 4 188 1.7E-57 T 25-04-2016 IPR025720 ECF transporter, Riboflavin transporter RibU GO:0005886|GO:0032217|GO:0032218 SMA_RS08250 e0210ef190a00b2fb3e9351be439d2ff 189 Pfam PF12822 Protein of unknown function (DUF3816) 9 179 9.2E-21 T 25-04-2016 IPR024529 ECF transporter, substrate-specific component GO:0005215 SMA_RS08250 e0210ef190a00b2fb3e9351be439d2ff 189 PANTHER PTHR38438:SF1 4 189 2.1E-52 T 25-04-2016 SMA_RS08250 e0210ef190a00b2fb3e9351be439d2ff 189 PANTHER PTHR38438 4 189 2.1E-52 T 25-04-2016 SMA_RS05175 1f0cc0af32b09121ce600859844bc09d 556 Hamap MF_01543 Formate--tetrahydrofolate ligase [fhs]. 1 556 49.229 T 25-04-2016 IPR000559 Formate-tetrahydrofolate ligase, FTHFS GO:0004329|GO:0005524|GO:0009396 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 SMA_RS05175 1f0cc0af32b09121ce600859844bc09d 556 PANTHER PTHR10025 1 555 0.0 T 25-04-2016 SMA_RS05175 1f0cc0af32b09121ce600859844bc09d 556 Pfam PF01268 Formate--tetrahydrofolate ligase 2 556 1.9E-264 T 25-04-2016 IPR000559 Formate-tetrahydrofolate ligase, FTHFS GO:0004329|GO:0005524|GO:0009396 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 SMA_RS05175 1f0cc0af32b09121ce600859844bc09d 556 Gene3D G3DSA:3.30.1510.10 129 246 1.3E-55 T 25-04-2016 SMA_RS05175 1f0cc0af32b09121ce600859844bc09d 556 SUPERFAMILY SSF52540 4 554 4.58E-243 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS05175 1f0cc0af32b09121ce600859844bc09d 556 ProSitePatterns PS00721 Formate--tetrahydrofolate ligase signature 1. 103 113 - T 25-04-2016 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site GO:0004329|GO:0005524|GO:0009396 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 SMA_RS05175 1f0cc0af32b09121ce600859844bc09d 556 Gene3D G3DSA:3.40.50.300 13 128 4.7E-145 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS05175 1f0cc0af32b09121ce600859844bc09d 556 Gene3D G3DSA:3.40.50.300 248 441 4.7E-145 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS05175 1f0cc0af32b09121ce600859844bc09d 556 Gene3D G3DSA:3.10.410.10 443 532 1.2E-37 T 25-04-2016 SMA_RS05175 1f0cc0af32b09121ce600859844bc09d 556 ProSitePatterns PS00722 Formate--tetrahydrofolate ligase signature 2. 328 339 - T 25-04-2016 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site GO:0004329|GO:0005524|GO:0009396 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 SMA_RS04595 473b27273d7c64dd238da2597b234d53 604 SUPERFAMILY SSF56235 2 235 1.37E-63 T 25-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SMA_RS04595 473b27273d7c64dd238da2597b234d53 604 Pfam PF13522 Glutamine amidotransferase domain 65 189 2.2E-18 T 25-04-2016 SMA_RS04595 473b27273d7c64dd238da2597b234d53 604 Gene3D G3DSA:3.40.50.10490 444 604 1.6E-53 T 25-04-2016 SMA_RS04595 473b27273d7c64dd238da2597b234d53 604 PANTHER PTHR10937:SF0 1 604 2.7E-266 T 25-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 SMA_RS04595 473b27273d7c64dd238da2597b234d53 604 Gene3D G3DSA:3.60.20.10 2 240 3.7E-66 T 25-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SMA_RS04595 473b27273d7c64dd238da2597b234d53 604 SUPERFAMILY SSF53697 246 604 2.84E-87 T 25-04-2016 SMA_RS04595 473b27273d7c64dd238da2597b234d53 604 Gene3D G3DSA:3.40.50.10490 243 443 3.6E-50 T 25-04-2016 SMA_RS04595 473b27273d7c64dd238da2597b234d53 604 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 604 9.7E-204 T 25-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 SMA_RS04595 473b27273d7c64dd238da2597b234d53 604 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 604 37.245 T 25-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 SMA_RS04595 473b27273d7c64dd238da2597b234d53 604 Pfam PF01380 SIS domain 290 414 5.0E-27 T 25-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 SMA_RS04595 473b27273d7c64dd238da2597b234d53 604 Pfam PF01380 SIS domain 461 549 6.1E-14 T 25-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 SMA_RS04595 473b27273d7c64dd238da2597b234d53 604 PANTHER PTHR10937 1 604 2.7E-266 T 25-04-2016 SMA_RS01920 c83d9d63bdfe88a3c7bd7ad219a078a9 251 Hamap MF_01124 Adapter protein MecA [mecA]. 1 249 24.913 T 25-04-2016 IPR008681 Negative regulator of genetic competence, MecA SMA_RS01920 c83d9d63bdfe88a3c7bd7ad219a078a9 251 Pfam PF05389 Negative regulator of genetic competence (MecA) 1 245 4.0E-44 T 25-04-2016 IPR008681 Negative regulator of genetic competence, MecA SMA_RS01920 c83d9d63bdfe88a3c7bd7ad219a078a9 251 PANTHER PTHR39161:SF1 2 251 7.3E-60 T 25-04-2016 SMA_RS01920 c83d9d63bdfe88a3c7bd7ad219a078a9 251 PIRSF PIRSF029008 1 250 5.9E-67 T 25-04-2016 IPR008681 Negative regulator of genetic competence, MecA SMA_RS01920 c83d9d63bdfe88a3c7bd7ad219a078a9 251 PANTHER PTHR39161 2 251 7.3E-60 T 25-04-2016 SMA_RS05195 a65954c508761c1a0ca0fa70fca798fb 571 PANTHER PTHR22573 20 571 1.3E-230 T 25-04-2016 SMA_RS05195 a65954c508761c1a0ca0fa70fca798fb 571 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 325 451 3.9E-23 T 25-04-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SMA_RS05195 a65954c508761c1a0ca0fa70fca798fb 571 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 138 147 - T 25-04-2016 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SMA_RS05195 a65954c508761c1a0ca0fa70fca798fb 571 SUPERFAMILY SSF53738 26 236 2.51E-45 T 25-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SMA_RS05195 a65954c508761c1a0ca0fa70fca798fb 571 Gene3D G3DSA:3.40.120.10 20 215 9.3E-58 T 25-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SMA_RS05195 a65954c508761c1a0ca0fa70fca798fb 571 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 296 311 4.4E-5 T 25-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SMA_RS05195 a65954c508761c1a0ca0fa70fca798fb 571 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 137 151 4.4E-5 T 25-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SMA_RS05195 a65954c508761c1a0ca0fa70fca798fb 571 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 41 179 2.0E-39 T 25-04-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SMA_RS05195 a65954c508761c1a0ca0fa70fca798fb 571 SUPERFAMILY SSF55957 511 570 6.59E-16 T 25-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SMA_RS05195 a65954c508761c1a0ca0fa70fca798fb 571 SUPERFAMILY SSF55957 444 481 6.59E-16 T 25-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SMA_RS05195 a65954c508761c1a0ca0fa70fca798fb 571 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 225 311 1.4E-22 T 25-04-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SMA_RS05195 a65954c508761c1a0ca0fa70fca798fb 571 SUPERFAMILY SSF53738 304 454 2.21E-31 T 25-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SMA_RS05195 a65954c508761c1a0ca0fa70fca798fb 571 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 503 551 2.2E-9 T 25-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SMA_RS05195 a65954c508761c1a0ca0fa70fca798fb 571 Gene3D G3DSA:3.40.120.10 308 454 2.8E-38 T 25-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SMA_RS05195 a65954c508761c1a0ca0fa70fca798fb 571 Gene3D G3DSA:3.30.310.50 480 570 3.7E-25 T 25-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SMA_RS05195 a65954c508761c1a0ca0fa70fca798fb 571 Gene3D G3DSA:3.40.120.10 230 307 4.2E-22 T 25-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SMA_RS05195 a65954c508761c1a0ca0fa70fca798fb 571 SUPERFAMILY SSF53738 227 312 1.96E-19 T 25-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SMA_RS05195 a65954c508761c1a0ca0fa70fca798fb 571 PANTHER PTHR22573:SF54 20 571 1.3E-230 T 25-04-2016 SMA_RS08760 17e3279512be21bced05abf2d86f5c67 351 SUPERFAMILY SSF51569 3 341 8.06E-95 T 25-04-2016 SMA_RS08760 17e3279512be21bced05abf2d86f5c67 351 Pfam PF00793 DAHP synthetase I family 36 333 2.9E-51 T 25-04-2016 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 SMA_RS08760 17e3279512be21bced05abf2d86f5c67 351 Gene3D G3DSA:3.20.20.70 3 342 1.5E-104 T 25-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SMA_RS08760 17e3279512be21bced05abf2d86f5c67 351 PIRSF PIRSF001361 1 347 4.6E-116 T 25-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 SMA_RS08760 17e3279512be21bced05abf2d86f5c67 351 PANTHER PTHR21225 10 341 7.5E-163 T 25-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 SMA_RS08760 17e3279512be21bced05abf2d86f5c67 351 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 34 342 1.9E-76 T 25-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 SMA_RS07235 d670eadc368a33ebcbf1f691b0415d61 650 SUPERFAMILY SSF54211 232 402 2.28E-63 T 25-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SMA_RS07235 d670eadc368a33ebcbf1f691b0415d61 650 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 42 183 6.3E-23 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMA_RS07235 d670eadc368a33ebcbf1f691b0415d61 650 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 12 650 89.585 T 25-04-2016 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 SMA_RS07235 d670eadc368a33ebcbf1f691b0415d61 650 Gene3D G3DSA:3.30.230.10 231 403 2.3E-76 T 25-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SMA_RS07235 d670eadc368a33ebcbf1f691b0415d61 650 PRINTS PR01159 DNA gyrase subunit B signature 190 205 2.0E-76 T 25-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SMA_RS07235 d670eadc368a33ebcbf1f691b0415d61 650 PRINTS PR01159 DNA gyrase subunit B signature 385 405 2.0E-76 T 25-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SMA_RS07235 d670eadc368a33ebcbf1f691b0415d61 650 PRINTS PR01159 DNA gyrase subunit B signature 231 253 2.0E-76 T 25-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SMA_RS07235 d670eadc368a33ebcbf1f691b0415d61 650 PRINTS PR01159 DNA gyrase subunit B signature 323 339 2.0E-76 T 25-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SMA_RS07235 d670eadc368a33ebcbf1f691b0415d61 650 PRINTS PR01159 DNA gyrase subunit B signature 620 636 2.0E-76 T 25-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SMA_RS07235 d670eadc368a33ebcbf1f691b0415d61 650 PRINTS PR01159 DNA gyrase subunit B signature 481 490 2.0E-76 T 25-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SMA_RS07235 d670eadc368a33ebcbf1f691b0415d61 650 PRINTS PR01159 DNA gyrase subunit B signature 371 385 2.0E-76 T 25-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SMA_RS07235 d670eadc368a33ebcbf1f691b0415d61 650 PRINTS PR01159 DNA gyrase subunit B signature 205 218 2.0E-76 T 25-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SMA_RS07235 d670eadc368a33ebcbf1f691b0415d61 650 PRINTS PR01159 DNA gyrase subunit B signature 604 616 2.0E-76 T 25-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SMA_RS07235 d670eadc368a33ebcbf1f691b0415d61 650 PRINTS PR01159 DNA gyrase subunit B signature 15 25 2.0E-76 T 25-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SMA_RS07235 d670eadc368a33ebcbf1f691b0415d61 650 SUPERFAMILY SSF56719 405 642 3.4E-84 T 25-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 SMA_RS07235 d670eadc368a33ebcbf1f691b0415d61 650 Pfam PF01751 Toprim domain 430 541 1.1E-17 T 25-04-2016 IPR006171 Toprim domain SMA_RS07235 d670eadc368a33ebcbf1f691b0415d61 650 SMART SM00387 40 184 2.2E-22 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMA_RS07235 d670eadc368a33ebcbf1f691b0415d61 650 ProSitePatterns PS00177 DNA topoisomerase II signature. 433 441 - T 25-04-2016 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 SMA_RS07235 d670eadc368a33ebcbf1f691b0415d61 650 Pfam PF00204 DNA gyrase B 232 401 1.0E-66 T 25-04-2016 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 SMA_RS07235 d670eadc368a33ebcbf1f691b0415d61 650 Gene3D G3DSA:3.30.565.10 15 227 3.5E-92 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMA_RS07235 d670eadc368a33ebcbf1f691b0415d61 650 Gene3D G3DSA:3.40.50.670 415 633 4.8E-89 T 25-04-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 SMA_RS07235 d670eadc368a33ebcbf1f691b0415d61 650 SMART SM00433 44 644 0.0 T 25-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SMA_RS07235 d670eadc368a33ebcbf1f691b0415d61 650 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 579 640 2.2E-29 T 25-04-2016 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 SMA_RS07235 d670eadc368a33ebcbf1f691b0415d61 650 SUPERFAMILY SSF55874 14 227 3.79E-75 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMA_RS07235 d670eadc368a33ebcbf1f691b0415d61 650 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 15 649 1.6E-297 T 25-04-2016 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 SMA_RS07235 d670eadc368a33ebcbf1f691b0415d61 650 PRINTS PR00418 DNA topoisomerase II family signature 44 59 2.9E-68 T 25-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SMA_RS07235 d670eadc368a33ebcbf1f691b0415d61 650 PRINTS PR00418 DNA topoisomerase II family signature 431 445 2.9E-68 T 25-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SMA_RS07235 d670eadc368a33ebcbf1f691b0415d61 650 PRINTS PR00418 DNA topoisomerase II family signature 279 292 2.9E-68 T 25-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SMA_RS07235 d670eadc368a33ebcbf1f691b0415d61 650 PRINTS PR00418 DNA topoisomerase II family signature 583 599 2.9E-68 T 25-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SMA_RS07235 d670eadc368a33ebcbf1f691b0415d61 650 PRINTS PR00418 DNA topoisomerase II family signature 122 136 2.9E-68 T 25-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SMA_RS07235 d670eadc368a33ebcbf1f691b0415d61 650 PRINTS PR00418 DNA topoisomerase II family signature 515 532 2.9E-68 T 25-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SMA_RS07235 d670eadc368a33ebcbf1f691b0415d61 650 PRINTS PR00418 DNA topoisomerase II family signature 535 547 2.9E-68 T 25-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SMA_RS07235 d670eadc368a33ebcbf1f691b0415d61 650 PRINTS PR00418 DNA topoisomerase II family signature 497 513 2.9E-68 T 25-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SMA_RS07235 d670eadc368a33ebcbf1f691b0415d61 650 PRINTS PR00418 DNA topoisomerase II family signature 79 92 2.9E-68 T 25-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SMA_RS07235 d670eadc368a33ebcbf1f691b0415d61 650 PANTHER PTHR10169 13 643 3.7E-303 T 25-04-2016 SMA_RS07120 be045bb65dba54e153d9fd10ee978b67 281 PANTHER PTHR34185 1 281 1.6E-100 T 25-04-2016 SMA_RS07120 be045bb65dba54e153d9fd10ee978b67 281 PANTHER PTHR34185:SF1 1 281 1.6E-100 T 25-04-2016 SMA_RS07120 be045bb65dba54e153d9fd10ee978b67 281 SUPERFAMILY SSF143597 51 250 2.62E-67 T 25-04-2016 SMA_RS07120 be045bb65dba54e153d9fd10ee978b67 281 Gene3D G3DSA:3.40.1700.10 121 250 2.9E-54 T 25-04-2016 SMA_RS07120 be045bb65dba54e153d9fd10ee978b67 281 PIRSF PIRSF004793 14 278 5.9E-87 T 25-04-2016 IPR014046 Diadenylate cyclase-like SMA_RS07120 be045bb65dba54e153d9fd10ee978b67 281 Pfam PF02457 DisA bacterial checkpoint controller nucleotide-binding 128 245 3.1E-43 T 25-04-2016 IPR003390 DNA integrity scanning protein, DisA, N-terminal SMA_RS07120 be045bb65dba54e153d9fd10ee978b67 281 TIGRFAM TIGR00159 TIGR00159: TIGR00159 family protein 24 264 2.7E-83 T 25-04-2016 IPR014046 Diadenylate cyclase-like SMA_RS03220 c634b352365c09e78346845b7acb21a3 627 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 329 335 - T 25-04-2016 IPR018303 P-type ATPase, phosphorylation site SMA_RS03220 c634b352365c09e78346845b7acb21a3 627 PANTHER PTHR24093:SF210 35 625 2.4E-224 T 25-04-2016 SMA_RS03220 c634b352365c09e78346845b7acb21a3 627 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 96 608 1.3E-71 T 25-04-2016 IPR001757 P-type ATPase GO:0016021 SMA_RS03220 c634b352365c09e78346845b7acb21a3 627 Pfam PF00122 E1-E2 ATPase 94 318 7.3E-57 T 25-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 SMA_RS03220 c634b352365c09e78346845b7acb21a3 627 Gene3D G3DSA:2.70.150.10 72 224 1.2E-23 T 25-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 SMA_RS03220 c634b352365c09e78346845b7acb21a3 627 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 69 622 1.7E-158 T 25-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 SMA_RS03220 c634b352365c09e78346845b7acb21a3 627 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 520 539 6.3E-22 T 25-04-2016 SMA_RS03220 c634b352365c09e78346845b7acb21a3 627 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 464 474 6.3E-22 T 25-04-2016 SMA_RS03220 c634b352365c09e78346845b7acb21a3 627 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 327 341 6.3E-22 T 25-04-2016 SMA_RS03220 c634b352365c09e78346845b7acb21a3 627 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 173 187 6.3E-22 T 25-04-2016 SMA_RS03220 c634b352365c09e78346845b7acb21a3 627 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 544 556 6.3E-22 T 25-04-2016 SMA_RS03220 c634b352365c09e78346845b7acb21a3 627 Gene3D G3DSA:3.40.50.1000 300 342 1.0E-43 T 25-04-2016 IPR023214 HAD-like domain SMA_RS03220 c634b352365c09e78346845b7acb21a3 627 Gene3D G3DSA:3.40.50.1000 444 589 1.0E-43 T 25-04-2016 IPR023214 HAD-like domain SMA_RS03220 c634b352365c09e78346845b7acb21a3 627 SUPERFAMILY SSF81653 126 222 6.54E-20 T 25-04-2016 SMA_RS03220 c634b352365c09e78346845b7acb21a3 627 PANTHER PTHR24093 35 625 2.4E-224 T 25-04-2016 SMA_RS03220 c634b352365c09e78346845b7acb21a3 627 SUPERFAMILY SSF81665 224 321 1.44E-14 T 25-04-2016 SMA_RS03220 c634b352365c09e78346845b7acb21a3 627 SUPERFAMILY SSF81665 69 127 1.44E-14 T 25-04-2016 SMA_RS03220 c634b352365c09e78346845b7acb21a3 627 Gene3D G3DSA:3.40.1110.10 343 443 7.0E-8 T 25-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 SMA_RS03220 c634b352365c09e78346845b7acb21a3 627 Pfam PF00702 haloacid dehalogenase-like hydrolase 326 534 2.4E-31 T 25-04-2016 SMA_RS03220 c634b352365c09e78346845b7acb21a3 627 SUPERFAMILY SSF56784 382 621 6.79E-56 T 25-04-2016 IPR023214 HAD-like domain SMA_RS03220 c634b352365c09e78346845b7acb21a3 627 SUPERFAMILY SSF56784 326 345 6.79E-56 T 25-04-2016 IPR023214 HAD-like domain SMA_RS03220 c634b352365c09e78346845b7acb21a3 627 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 68 624 2.0E-141 T 25-04-2016 SMA_RS09600 4491f74e0ef080badf1b2b3402970dbd 7960 SUPERFAMILY SSF103647 1300 1339 5.36E-5 T 25-04-2016 IPR028974 TSP type-3 repeat GO:0005509 SMA_RS09600 4491f74e0ef080badf1b2b3402970dbd 7960 TIGRFAM TIGR01167 LPXTG_anchor: LPXTG cell wall anchor domain 7923 7956 3.5E-6 T 25-04-2016 IPR019931 LPXTG cell wall anchor domain SMA_RS09600 4491f74e0ef080badf1b2b3402970dbd 7960 Gene3D G3DSA:4.10.1080.10 5502 5539 4.7E-6 T 25-04-2016 IPR028974 TSP type-3 repeat GO:0005509 SMA_RS09600 4491f74e0ef080badf1b2b3402970dbd 7960 Gene3D G3DSA:4.10.1080.10 6685 6717 1.7E-8 T 25-04-2016 IPR028974 TSP type-3 repeat GO:0005509 SMA_RS09600 4491f74e0ef080badf1b2b3402970dbd 7960 Gene3D G3DSA:4.10.1080.10 5767 5800 4.7E-6 T 25-04-2016 IPR028974 TSP type-3 repeat GO:0005509 SMA_RS09600 4491f74e0ef080badf1b2b3402970dbd 7960 Gene3D G3DSA:4.10.1080.10 5637 5669 4.7E-6 T 25-04-2016 IPR028974 TSP type-3 repeat GO:0005509 SMA_RS09600 4491f74e0ef080badf1b2b3402970dbd 7960 Gene3D G3DSA:4.10.1080.10 6815 6848 1.7E-8 T 25-04-2016 IPR028974 TSP type-3 repeat GO:0005509 SMA_RS09600 4491f74e0ef080badf1b2b3402970dbd 7960 Gene3D G3DSA:4.10.1080.10 6550 6587 1.7E-8 T 25-04-2016 IPR028974 TSP type-3 repeat GO:0005509 SMA_RS09600 4491f74e0ef080badf1b2b3402970dbd 7960 Pfam PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) 846 922 0.019 T 25-04-2016 IPR013378 Listeria/Bacterioides repeat SMA_RS09600 4491f74e0ef080badf1b2b3402970dbd 7960 Pfam PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) 454 519 0.0024 T 25-04-2016 IPR013378 Listeria/Bacterioides repeat SMA_RS09600 4491f74e0ef080badf1b2b3402970dbd 7960 Pfam PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) 1050 1105 3.8E-6 T 25-04-2016 IPR013378 Listeria/Bacterioides repeat SMA_RS09600 4491f74e0ef080badf1b2b3402970dbd 7960 Pfam PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) 526 592 1.5E-5 T 25-04-2016 IPR013378 Listeria/Bacterioides repeat SMA_RS09600 4491f74e0ef080badf1b2b3402970dbd 7960 Pfam PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) 1136 1202 3.5E-8 T 25-04-2016 IPR013378 Listeria/Bacterioides repeat SMA_RS09600 4491f74e0ef080badf1b2b3402970dbd 7960 Pfam PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) 375 434 0.078 T 25-04-2016 IPR013378 Listeria/Bacterioides repeat SMA_RS09600 4491f74e0ef080badf1b2b3402970dbd 7960 Pfam PF04650 YSIRK type signal peptide 5 30 1.5E-9 T 25-04-2016 IPR005877 YSIRK Gram-positive signal peptide GO:0016020 SMA_RS09600 4491f74e0ef080badf1b2b3402970dbd 7960 TIGRFAM TIGR01168 YSIRK_signal: gram-positive signal peptide, YSIRK family 5 35 8.7E-9 T 25-04-2016 IPR005877 YSIRK Gram-positive signal peptide GO:0016020 SMA_RS09600 4491f74e0ef080badf1b2b3402970dbd 7960 SUPERFAMILY SSF49313 1762 1838 2.04E-8 T 25-04-2016 IPR015919 Cadherin-like GO:0005509|GO:0016020 SMA_RS09600 4491f74e0ef080badf1b2b3402970dbd 7960 SUPERFAMILY SSF49313 2810 2886 2.04E-8 T 25-04-2016 IPR015919 Cadherin-like GO:0005509|GO:0016020 SMA_RS09600 4491f74e0ef080badf1b2b3402970dbd 7960 SUPERFAMILY SSF49313 3858 3934 2.04E-8 T 25-04-2016 IPR015919 Cadherin-like GO:0005509|GO:0016020 SMA_RS09600 4491f74e0ef080badf1b2b3402970dbd 7960 SUPERFAMILY SSF49313 5954 6030 2.04E-8 T 25-04-2016 IPR015919 Cadherin-like GO:0005509|GO:0016020 SMA_RS09600 4491f74e0ef080badf1b2b3402970dbd 7960 SUPERFAMILY SSF49313 4906 4982 2.04E-8 T 25-04-2016 IPR015919 Cadherin-like GO:0005509|GO:0016020 SMA_RS09600 4491f74e0ef080badf1b2b3402970dbd 7960 SUPERFAMILY SSF49313 7002 7078 2.04E-8 T 25-04-2016 IPR015919 Cadherin-like GO:0005509|GO:0016020 SMA_RS09600 4491f74e0ef080badf1b2b3402970dbd 7960 SUPERFAMILY SSF49313 2417 2493 2.04E-8 T 25-04-2016 IPR015919 Cadherin-like GO:0005509|GO:0016020 SMA_RS09600 4491f74e0ef080badf1b2b3402970dbd 7960 SUPERFAMILY SSF49313 3465 3541 2.04E-8 T 25-04-2016 IPR015919 Cadherin-like GO:0005509|GO:0016020 SMA_RS09600 4491f74e0ef080badf1b2b3402970dbd 7960 SUPERFAMILY SSF49313 4513 4589 2.04E-8 T 25-04-2016 IPR015919 Cadherin-like GO:0005509|GO:0016020 SMA_RS09600 4491f74e0ef080badf1b2b3402970dbd 7960 SUPERFAMILY SSF49313 5561 5637 2.04E-8 T 25-04-2016 IPR015919 Cadherin-like GO:0005509|GO:0016020 SMA_RS09600 4491f74e0ef080badf1b2b3402970dbd 7960 SUPERFAMILY SSF49313 6609 6685 2.04E-8 T 25-04-2016 IPR015919 Cadherin-like GO:0005509|GO:0016020 SMA_RS09600 4491f74e0ef080badf1b2b3402970dbd 7960 SUPERFAMILY SSF49313 7657 7733 2.04E-8 T 25-04-2016 IPR015919 Cadherin-like GO:0005509|GO:0016020 SMA_RS09600 4491f74e0ef080badf1b2b3402970dbd 7960 SUPERFAMILY SSF49313 2024 2100 2.04E-8 T 25-04-2016 IPR015919 Cadherin-like GO:0005509|GO:0016020 SMA_RS09600 4491f74e0ef080badf1b2b3402970dbd 7960 SUPERFAMILY SSF49313 3072 3148 2.04E-8 T 25-04-2016 IPR015919 Cadherin-like GO:0005509|GO:0016020 SMA_RS09600 4491f74e0ef080badf1b2b3402970dbd 7960 SUPERFAMILY SSF49313 4120 4196 2.04E-8 T 25-04-2016 IPR015919 Cadherin-like GO:0005509|GO:0016020 SMA_RS09600 4491f74e0ef080badf1b2b3402970dbd 7960 SUPERFAMILY SSF49313 5168 5244 2.04E-8 T 25-04-2016 IPR015919 Cadherin-like GO:0005509|GO:0016020 SMA_RS09600 4491f74e0ef080badf1b2b3402970dbd 7960 SUPERFAMILY SSF49313 6216 6292 2.04E-8 T 25-04-2016 IPR015919 Cadherin-like GO:0005509|GO:0016020 SMA_RS09600 4491f74e0ef080badf1b2b3402970dbd 7960 SUPERFAMILY SSF49313 7264 7340 2.04E-8 T 25-04-2016 IPR015919 Cadherin-like GO:0005509|GO:0016020 SMA_RS09600 4491f74e0ef080badf1b2b3402970dbd 7960 SUPERFAMILY SSF49313 1631 1707 2.04E-8 T 25-04-2016 IPR015919 Cadherin-like GO:0005509|GO:0016020 SMA_RS09600 4491f74e0ef080badf1b2b3402970dbd 7960 SUPERFAMILY SSF49313 2679 2755 2.04E-8 T 25-04-2016 IPR015919 Cadherin-like GO:0005509|GO:0016020 SMA_RS09600 4491f74e0ef080badf1b2b3402970dbd 7960 SUPERFAMILY SSF49313 4775 4851 2.04E-8 T 25-04-2016 IPR015919 Cadherin-like GO:0005509|GO:0016020 SMA_RS09600 4491f74e0ef080badf1b2b3402970dbd 7960 SUPERFAMILY SSF49313 3727 3803 2.04E-8 T 25-04-2016 IPR015919 Cadherin-like GO:0005509|GO:0016020 SMA_RS09600 4491f74e0ef080badf1b2b3402970dbd 7960 SUPERFAMILY SSF49313 5823 5899 2.04E-8 T 25-04-2016 IPR015919 Cadherin-like GO:0005509|GO:0016020 SMA_RS09600 4491f74e0ef080badf1b2b3402970dbd 7960 SUPERFAMILY SSF49313 6871 6947 2.04E-8 T 25-04-2016 IPR015919 Cadherin-like GO:0005509|GO:0016020 SMA_RS09600 4491f74e0ef080badf1b2b3402970dbd 7960 SUPERFAMILY SSF49313 2286 2362 2.04E-8 T 25-04-2016 IPR015919 Cadherin-like GO:0005509|GO:0016020 SMA_RS09600 4491f74e0ef080badf1b2b3402970dbd 7960 SUPERFAMILY SSF49313 3334 3410 2.04E-8 T 25-04-2016 IPR015919 Cadherin-like GO:0005509|GO:0016020 SMA_RS09600 4491f74e0ef080badf1b2b3402970dbd 7960 SUPERFAMILY SSF49313 4382 4458 2.04E-8 T 25-04-2016 IPR015919 Cadherin-like GO:0005509|GO:0016020 SMA_RS09600 4491f74e0ef080badf1b2b3402970dbd 7960 SUPERFAMILY SSF49313 5430 5506 2.04E-8 T 25-04-2016 IPR015919 Cadherin-like GO:0005509|GO:0016020 SMA_RS09600 4491f74e0ef080badf1b2b3402970dbd 7960 SUPERFAMILY SSF49313 6478 6554 2.04E-8 T 25-04-2016 IPR015919 Cadherin-like GO:0005509|GO:0016020 SMA_RS09600 4491f74e0ef080badf1b2b3402970dbd 7960 SUPERFAMILY SSF49313 7526 7602 2.04E-8 T 25-04-2016 IPR015919 Cadherin-like GO:0005509|GO:0016020 SMA_RS09600 4491f74e0ef080badf1b2b3402970dbd 7960 SUPERFAMILY SSF49313 1893 1969 2.04E-8 T 25-04-2016 IPR015919 Cadherin-like GO:0005509|GO:0016020 SMA_RS09600 4491f74e0ef080badf1b2b3402970dbd 7960 SUPERFAMILY SSF49313 2941 3017 2.04E-8 T 25-04-2016 IPR015919 Cadherin-like GO:0005509|GO:0016020 SMA_RS09600 4491f74e0ef080badf1b2b3402970dbd 7960 SUPERFAMILY SSF49313 3989 4065 2.04E-8 T 25-04-2016 IPR015919 Cadherin-like GO:0005509|GO:0016020 SMA_RS09600 4491f74e0ef080badf1b2b3402970dbd 7960 SUPERFAMILY SSF49313 5037 5113 2.04E-8 T 25-04-2016 IPR015919 Cadherin-like GO:0005509|GO:0016020 SMA_RS09600 4491f74e0ef080badf1b2b3402970dbd 7960 SUPERFAMILY SSF49313 6085 6161 2.04E-8 T 25-04-2016 IPR015919 Cadherin-like GO:0005509|GO:0016020 SMA_RS09600 4491f74e0ef080badf1b2b3402970dbd 7960 SUPERFAMILY SSF49313 7133 7209 2.04E-8 T 25-04-2016 IPR015919 Cadherin-like GO:0005509|GO:0016020 SMA_RS09600 4491f74e0ef080badf1b2b3402970dbd 7960 SUPERFAMILY SSF49313 2548 2624 2.04E-8 T 25-04-2016 IPR015919 Cadherin-like GO:0005509|GO:0016020 SMA_RS09600 4491f74e0ef080badf1b2b3402970dbd 7960 SUPERFAMILY SSF49313 3596 3672 2.04E-8 T 25-04-2016 IPR015919 Cadherin-like GO:0005509|GO:0016020 SMA_RS09600 4491f74e0ef080badf1b2b3402970dbd 7960 SUPERFAMILY SSF49313 4644 4720 2.04E-8 T 25-04-2016 IPR015919 Cadherin-like GO:0005509|GO:0016020 SMA_RS09600 4491f74e0ef080badf1b2b3402970dbd 7960 SUPERFAMILY SSF49313 5692 5768 2.04E-8 T 25-04-2016 IPR015919 Cadherin-like GO:0005509|GO:0016020 SMA_RS09600 4491f74e0ef080badf1b2b3402970dbd 7960 SUPERFAMILY SSF49313 6740 6816 2.04E-8 T 25-04-2016 IPR015919 Cadherin-like GO:0005509|GO:0016020 SMA_RS09600 4491f74e0ef080badf1b2b3402970dbd 7960 SUPERFAMILY SSF49313 7788 7864 2.04E-8 T 25-04-2016 IPR015919 Cadherin-like GO:0005509|GO:0016020 SMA_RS09600 4491f74e0ef080badf1b2b3402970dbd 7960 SUPERFAMILY SSF49313 2155 2231 2.04E-8 T 25-04-2016 IPR015919 Cadherin-like GO:0005509|GO:0016020 SMA_RS09600 4491f74e0ef080badf1b2b3402970dbd 7960 SUPERFAMILY SSF49313 3203 3279 2.04E-8 T 25-04-2016 IPR015919 Cadherin-like GO:0005509|GO:0016020 SMA_RS09600 4491f74e0ef080badf1b2b3402970dbd 7960 SUPERFAMILY SSF49313 4251 4327 2.04E-8 T 25-04-2016 IPR015919 Cadherin-like GO:0005509|GO:0016020 SMA_RS09600 4491f74e0ef080badf1b2b3402970dbd 7960 SUPERFAMILY SSF49313 5299 5375 2.04E-8 T 25-04-2016 IPR015919 Cadherin-like GO:0005509|GO:0016020 SMA_RS09600 4491f74e0ef080badf1b2b3402970dbd 7960 SUPERFAMILY SSF49313 6347 6423 2.04E-8 T 25-04-2016 IPR015919 Cadherin-like GO:0005509|GO:0016020 SMA_RS09600 4491f74e0ef080badf1b2b3402970dbd 7960 SUPERFAMILY SSF49313 7395 7471 2.04E-8 T 25-04-2016 IPR015919 Cadherin-like GO:0005509|GO:0016020 SMA_RS09600 4491f74e0ef080badf1b2b3402970dbd 7960 Gene3D G3DSA:2.60.40.10 5417 5501 5.0E-8 T 25-04-2016 IPR013783 Immunoglobulin-like fold SMA_RS09600 4491f74e0ef080badf1b2b3402970dbd 7960 Gene3D G3DSA:2.60.40.10 5679 5766 5.0E-8 T 25-04-2016 IPR013783 Immunoglobulin-like fold SMA_RS09600 4491f74e0ef080badf1b2b3402970dbd 7960 Gene3D G3DSA:2.60.40.10 6465 6549 5.0E-8 T 25-04-2016 IPR013783 Immunoglobulin-like fold SMA_RS09600 4491f74e0ef080badf1b2b3402970dbd 7960 Gene3D G3DSA:2.60.40.10 1749 1838 5.0E-8 T 25-04-2016 IPR013783 Immunoglobulin-like fold SMA_RS09600 4491f74e0ef080badf1b2b3402970dbd 7960 Gene3D G3DSA:2.60.40.10 1618 1707 5.0E-8 T 25-04-2016 IPR013783 Immunoglobulin-like fold SMA_RS09600 4491f74e0ef080badf1b2b3402970dbd 7960 Gene3D G3DSA:2.60.40.10 6727 6814 5.0E-8 T 25-04-2016 IPR013783 Immunoglobulin-like fold SMA_RS09600 4491f74e0ef080badf1b2b3402970dbd 7960 Gene3D G3DSA:2.60.40.10 2797 2886 5.0E-8 T 25-04-2016 IPR013783 Immunoglobulin-like fold SMA_RS09600 4491f74e0ef080badf1b2b3402970dbd 7960 Gene3D G3DSA:2.60.40.10 2273 2362 5.0E-8 T 25-04-2016 IPR013783 Immunoglobulin-like fold SMA_RS09600 4491f74e0ef080badf1b2b3402970dbd 7960 Gene3D G3DSA:2.60.40.10 4369 4458 5.0E-8 T 25-04-2016 IPR013783 Immunoglobulin-like fold SMA_RS09600 4491f74e0ef080badf1b2b3402970dbd 7960 Gene3D G3DSA:2.60.40.10 4238 4327 5.0E-8 T 25-04-2016 IPR013783 Immunoglobulin-like fold SMA_RS09600 4491f74e0ef080badf1b2b3402970dbd 7960 Gene3D G3DSA:2.60.40.10 3976 4065 5.0E-8 T 25-04-2016 IPR013783 Immunoglobulin-like fold SMA_RS09600 4491f74e0ef080badf1b2b3402970dbd 7960 Gene3D G3DSA:2.60.40.10 4107 4196 5.0E-8 T 25-04-2016 IPR013783 Immunoglobulin-like fold SMA_RS09600 4491f74e0ef080badf1b2b3402970dbd 7960 Gene3D G3DSA:2.60.40.10 3321 3410 5.0E-8 T 25-04-2016 IPR013783 Immunoglobulin-like fold SMA_RS09600 4491f74e0ef080badf1b2b3402970dbd 7960 Gene3D G3DSA:2.60.40.10 6596 6684 5.0E-8 T 25-04-2016 IPR013783 Immunoglobulin-like fold SMA_RS09600 4491f74e0ef080badf1b2b3402970dbd 7960 Gene3D G3DSA:2.60.40.10 3190 3279 5.0E-8 T 25-04-2016 IPR013783 Immunoglobulin-like fold SMA_RS09600 4491f74e0ef080badf1b2b3402970dbd 7960 Gene3D G3DSA:2.60.40.10 2928 3017 5.0E-8 T 25-04-2016 IPR013783 Immunoglobulin-like fold SMA_RS09600 4491f74e0ef080badf1b2b3402970dbd 7960 Gene3D G3DSA:2.60.40.10 5155 5244 5.0E-8 T 25-04-2016 IPR013783 Immunoglobulin-like fold SMA_RS09600 4491f74e0ef080badf1b2b3402970dbd 7960 Gene3D G3DSA:2.60.40.10 1880 1969 5.0E-8 T 25-04-2016 IPR013783 Immunoglobulin-like fold SMA_RS09600 4491f74e0ef080badf1b2b3402970dbd 7960 Gene3D G3DSA:2.60.40.10 2142 2231 5.0E-8 T 25-04-2016 IPR013783 Immunoglobulin-like fold SMA_RS09600 4491f74e0ef080badf1b2b3402970dbd 7960 Gene3D G3DSA:2.60.40.10 6334 6423 5.0E-8 T 25-04-2016 IPR013783 Immunoglobulin-like fold SMA_RS09600 4491f74e0ef080badf1b2b3402970dbd 7960 Gene3D G3DSA:2.60.40.10 5548 5636 5.0E-8 T 25-04-2016 IPR013783 Immunoglobulin-like fold SMA_RS09600 4491f74e0ef080badf1b2b3402970dbd 7960 Gene3D G3DSA:2.60.40.10 3059 3148 5.0E-8 T 25-04-2016 IPR013783 Immunoglobulin-like fold SMA_RS09600 4491f74e0ef080badf1b2b3402970dbd 7960 Gene3D G3DSA:2.60.40.10 5286 5375 5.0E-8 T 25-04-2016 IPR013783 Immunoglobulin-like fold SMA_RS09600 4491f74e0ef080badf1b2b3402970dbd 7960 Gene3D G3DSA:2.60.40.10 7513 7602 5.0E-8 T 25-04-2016 IPR013783 Immunoglobulin-like fold SMA_RS09600 4491f74e0ef080badf1b2b3402970dbd 7960 Gene3D G3DSA:2.60.40.10 2011 2100 5.0E-8 T 25-04-2016 IPR013783 Immunoglobulin-like fold SMA_RS09600 4491f74e0ef080badf1b2b3402970dbd 7960 Gene3D G3DSA:2.60.40.10 7644 7733 5.0E-8 T 25-04-2016 IPR013783 Immunoglobulin-like fold SMA_RS09600 4491f74e0ef080badf1b2b3402970dbd 7960 Gene3D G3DSA:2.60.40.10 7382 7471 5.0E-8 T 25-04-2016 IPR013783 Immunoglobulin-like fold SMA_RS09600 4491f74e0ef080badf1b2b3402970dbd 7960 Gene3D G3DSA:2.60.40.10 7251 7340 5.0E-8 T 25-04-2016 IPR013783 Immunoglobulin-like fold SMA_RS09600 4491f74e0ef080badf1b2b3402970dbd 7960 Gene3D G3DSA:2.60.40.10 7120 7209 5.0E-8 T 25-04-2016 IPR013783 Immunoglobulin-like fold SMA_RS09600 4491f74e0ef080badf1b2b3402970dbd 7960 Gene3D G3DSA:2.60.40.10 6072 6161 5.0E-8 T 25-04-2016 IPR013783 Immunoglobulin-like fold SMA_RS09600 4491f74e0ef080badf1b2b3402970dbd 7960 Gene3D G3DSA:2.60.40.10 6203 6292 5.0E-8 T 25-04-2016 IPR013783 Immunoglobulin-like fold SMA_RS09600 4491f74e0ef080badf1b2b3402970dbd 7960 Gene3D G3DSA:2.60.40.10 7775 7864 5.0E-8 T 25-04-2016 IPR013783 Immunoglobulin-like fold SMA_RS09600 4491f74e0ef080badf1b2b3402970dbd 7960 Gene3D G3DSA:2.60.40.10 5024 5113 5.0E-8 T 25-04-2016 IPR013783 Immunoglobulin-like fold SMA_RS09600 4491f74e0ef080badf1b2b3402970dbd 7960 Gene3D G3DSA:2.60.40.10 4500 4589 5.0E-8 T 25-04-2016 IPR013783 Immunoglobulin-like fold SMA_RS09600 4491f74e0ef080badf1b2b3402970dbd 7960 Gene3D G3DSA:2.60.40.10 3583 3672 5.0E-8 T 25-04-2016 IPR013783 Immunoglobulin-like fold SMA_RS09600 4491f74e0ef080badf1b2b3402970dbd 7960 Gene3D G3DSA:2.60.40.10 3845 3934 5.0E-8 T 25-04-2016 IPR013783 Immunoglobulin-like fold SMA_RS09600 4491f74e0ef080badf1b2b3402970dbd 7960 Gene3D G3DSA:2.60.40.10 3714 3803 5.0E-8 T 25-04-2016 IPR013783 Immunoglobulin-like fold SMA_RS09600 4491f74e0ef080badf1b2b3402970dbd 7960 Gene3D G3DSA:2.60.40.10 3452 3541 5.0E-8 T 25-04-2016 IPR013783 Immunoglobulin-like fold SMA_RS09600 4491f74e0ef080badf1b2b3402970dbd 7960 Gene3D G3DSA:2.60.40.10 2666 2755 5.0E-8 T 25-04-2016 IPR013783 Immunoglobulin-like fold SMA_RS09600 4491f74e0ef080badf1b2b3402970dbd 7960 Gene3D G3DSA:2.60.40.10 2404 2493 5.0E-8 T 25-04-2016 IPR013783 Immunoglobulin-like fold SMA_RS09600 4491f74e0ef080badf1b2b3402970dbd 7960 Gene3D G3DSA:2.60.40.10 4893 4982 5.0E-8 T 25-04-2016 IPR013783 Immunoglobulin-like fold SMA_RS09600 4491f74e0ef080badf1b2b3402970dbd 7960 Gene3D G3DSA:2.60.40.10 4631 4720 5.0E-8 T 25-04-2016 IPR013783 Immunoglobulin-like fold SMA_RS09600 4491f74e0ef080badf1b2b3402970dbd 7960 Gene3D G3DSA:2.60.40.10 6989 7078 5.0E-8 T 25-04-2016 IPR013783 Immunoglobulin-like fold SMA_RS09600 4491f74e0ef080badf1b2b3402970dbd 7960 Gene3D G3DSA:2.60.40.10 6858 6947 5.0E-8 T 25-04-2016 IPR013783 Immunoglobulin-like fold SMA_RS09600 4491f74e0ef080badf1b2b3402970dbd 7960 Gene3D G3DSA:2.60.40.10 5941 6030 5.0E-8 T 25-04-2016 IPR013783 Immunoglobulin-like fold SMA_RS09600 4491f74e0ef080badf1b2b3402970dbd 7960 Gene3D G3DSA:2.60.40.10 5810 5899 5.0E-8 T 25-04-2016 IPR013783 Immunoglobulin-like fold SMA_RS09600 4491f74e0ef080badf1b2b3402970dbd 7960 Gene3D G3DSA:2.60.40.10 2535 2624 5.0E-8 T 25-04-2016 IPR013783 Immunoglobulin-like fold SMA_RS09600 4491f74e0ef080badf1b2b3402970dbd 7960 Gene3D G3DSA:2.60.40.10 4762 4851 5.0E-8 T 25-04-2016 IPR013783 Immunoglobulin-like fold SMA_RS09600 4491f74e0ef080badf1b2b3402970dbd 7960 TIGRFAM TIGR02543 List_Bact_rpt: repeat, TIGR02543 family 558 597 4.5E-5 T 25-04-2016 IPR013378 Listeria/Bacterioides repeat SMA_RS00375 ff8e6b780fe99228cefbbb588f3603d2 137 PRINTS PR00060 Ribosomal protein L16 signature 42 53 1.6E-37 T 25-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 SMA_RS00375 ff8e6b780fe99228cefbbb588f3603d2 137 PRINTS PR00060 Ribosomal protein L16 signature 24 36 1.6E-37 T 25-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 SMA_RS00375 ff8e6b780fe99228cefbbb588f3603d2 137 PRINTS PR00060 Ribosomal protein L16 signature 88 117 1.6E-37 T 25-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 SMA_RS00375 ff8e6b780fe99228cefbbb588f3603d2 137 PRINTS PR00060 Ribosomal protein L16 signature 58 87 1.6E-37 T 25-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 SMA_RS00375 ff8e6b780fe99228cefbbb588f3603d2 137 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 127 2.5E-57 T 25-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 SMA_RS00375 ff8e6b780fe99228cefbbb588f3603d2 137 PANTHER PTHR12220 1 135 8.0E-71 T 25-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 SMA_RS00375 ff8e6b780fe99228cefbbb588f3603d2 137 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 134 38.397 T 25-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 SMA_RS00375 ff8e6b780fe99228cefbbb588f3603d2 137 Gene3D G3DSA:3.90.1170.10 23 135 1.4E-53 T 25-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 SMA_RS00375 ff8e6b780fe99228cefbbb588f3603d2 137 Pfam PF00252 Ribosomal protein L16p/L10e 4 132 8.4E-49 T 25-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 SMA_RS00375 ff8e6b780fe99228cefbbb588f3603d2 137 SUPERFAMILY SSF54686 1 135 4.84E-55 T 25-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 SMA_RS00375 ff8e6b780fe99228cefbbb588f3603d2 137 ProSitePatterns PS00701 Ribosomal protein L16 signature 2. 82 93 - T 25-04-2016 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS00375 ff8e6b780fe99228cefbbb588f3603d2 137 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 59 70 - T 25-04-2016 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS07755 8265e72b15513594c47349eee93bc9f6 225 PANTHER PTHR23026 5 117 3.3E-55 T 25-04-2016 SMA_RS07755 8265e72b15513594c47349eee93bc9f6 225 PANTHER PTHR23026 135 225 3.3E-55 T 25-04-2016 SMA_RS07755 8265e72b15513594c47349eee93bc9f6 225 SUPERFAMILY SSF55469 9 223 8.38E-46 T 25-04-2016 IPR000415 Nitroreductase-like GO:0016491 SMA_RS07755 8265e72b15513594c47349eee93bc9f6 225 Pfam PF00881 Nitroreductase family 16 203 1.7E-25 T 25-04-2016 IPR029479 Nitroreductase SMA_RS07755 8265e72b15513594c47349eee93bc9f6 225 PANTHER PTHR23026:SF101 5 117 3.3E-55 T 25-04-2016 SMA_RS07755 8265e72b15513594c47349eee93bc9f6 225 PANTHER PTHR23026:SF101 135 225 3.3E-55 T 25-04-2016 SMA_RS07755 8265e72b15513594c47349eee93bc9f6 225 Gene3D G3DSA:3.40.109.10 7 224 5.7E-66 T 25-04-2016 IPR000415 Nitroreductase-like GO:0016491 SMA_RS10475 d9e10fef776f85fea11d11f109d60da9 364 SUPERFAMILY SSF52540 1 361 1.39E-45 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS10475 d9e10fef776f85fea11d11f109d60da9 364 ProSitePatterns PS00618 RecF protein signature 2. 305 323 - T 25-04-2016 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 SMA_RS10475 d9e10fef776f85fea11d11f109d60da9 364 ProSitePatterns PS00617 RecF protein signature 1. 116 136 - T 25-04-2016 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 SMA_RS10475 d9e10fef776f85fea11d11f109d60da9 364 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 1 360 2.0E-131 T 25-04-2016 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 SMA_RS10475 d9e10fef776f85fea11d11f109d60da9 364 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 359 7.0E-17 T 25-04-2016 IPR003395 RecF/RecN/SMC, N-terminal SMA_RS10475 d9e10fef776f85fea11d11f109d60da9 364 Gene3D G3DSA:3.40.50.300 1 170 6.8E-46 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS10475 d9e10fef776f85fea11d11f109d60da9 364 Gene3D G3DSA:3.40.50.300 238 359 6.8E-46 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS10475 d9e10fef776f85fea11d11f109d60da9 364 PANTHER PTHR32182:SF0 1 364 2.6E-70 T 25-04-2016 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 SMA_RS10475 d9e10fef776f85fea11d11f109d60da9 364 PANTHER PTHR32182 1 364 2.6E-70 T 25-04-2016 SMA_RS10475 d9e10fef776f85fea11d11f109d60da9 364 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 364 101.492 T 25-04-2016 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 SMA_RS00730 1e27401c6d16e5d5dd833b77ab37e7e1 399 Hamap MF_00020 Acetate kinase [ackA]. 1 398 180.517 T 25-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 SMA_RS00730 1e27401c6d16e5d5dd833b77ab37e7e1 399 SUPERFAMILY SSF53067 155 395 1.1E-84 T 25-04-2016 SMA_RS00730 1e27401c6d16e5d5dd833b77ab37e7e1 399 PANTHER PTHR21060:SF11 1 393 2.9E-198 T 25-04-2016 SMA_RS00730 1e27401c6d16e5d5dd833b77ab37e7e1 399 Pfam PF00871 Acetokinase family 5 389 7.5E-150 T 25-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 SMA_RS00730 1e27401c6d16e5d5dd833b77ab37e7e1 399 TIGRFAM TIGR00016 ackA: acetate kinase 3 394 1.1E-151 T 25-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 SMA_RS00730 1e27401c6d16e5d5dd833b77ab37e7e1 399 PRINTS PR00471 Acetate kinase family signature 301 314 4.6E-43 T 25-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 SMA_RS00730 1e27401c6d16e5d5dd833b77ab37e7e1 399 PRINTS PR00471 Acetate kinase family signature 202 223 4.6E-43 T 25-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 SMA_RS00730 1e27401c6d16e5d5dd833b77ab37e7e1 399 PRINTS PR00471 Acetate kinase family signature 172 185 4.6E-43 T 25-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 SMA_RS00730 1e27401c6d16e5d5dd833b77ab37e7e1 399 PRINTS PR00471 Acetate kinase family signature 4 15 4.6E-43 T 25-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 SMA_RS00730 1e27401c6d16e5d5dd833b77ab37e7e1 399 PRINTS PR00471 Acetate kinase family signature 323 339 4.6E-43 T 25-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 SMA_RS00730 1e27401c6d16e5d5dd833b77ab37e7e1 399 PRINTS PR00471 Acetate kinase family signature 376 388 4.6E-43 T 25-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 SMA_RS00730 1e27401c6d16e5d5dd833b77ab37e7e1 399 PIRSF PIRSF000722 1 399 1.3E-144 T 25-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 SMA_RS00730 1e27401c6d16e5d5dd833b77ab37e7e1 399 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 202 219 - T 25-04-2016 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 SMA_RS00730 1e27401c6d16e5d5dd833b77ab37e7e1 399 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 4 15 - T 25-04-2016 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 SMA_RS00730 1e27401c6d16e5d5dd833b77ab37e7e1 399 PANTHER PTHR21060 1 393 2.9E-198 T 25-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 SMA_RS00730 1e27401c6d16e5d5dd833b77ab37e7e1 399 SUPERFAMILY SSF53067 2 195 1.04E-64 T 25-04-2016 SMA_RS00730 1e27401c6d16e5d5dd833b77ab37e7e1 399 Gene3D G3DSA:3.30.420.40 204 393 2.0E-74 T 25-04-2016 SMA_RS00730 1e27401c6d16e5d5dd833b77ab37e7e1 399 Gene3D G3DSA:3.30.420.40 88 203 9.1E-11 T 25-04-2016 SMA_RS07605 09800cc7d96c97cbd0986a31ead3c4de 272 Gene3D G3DSA:3.30.1240.10 88 183 1.5E-18 T 25-04-2016 SMA_RS07605 09800cc7d96c97cbd0986a31ead3c4de 272 PANTHER PTHR10000 1 271 2.1E-78 T 25-04-2016 SMA_RS07605 09800cc7d96c97cbd0986a31ead3c4de 272 PANTHER PTHR10000:SF1 1 271 2.1E-78 T 25-04-2016 SMA_RS07605 09800cc7d96c97cbd0986a31ead3c4de 272 SUPERFAMILY SSF56784 2 270 1.58E-68 T 25-04-2016 IPR023214 HAD-like domain SMA_RS07605 09800cc7d96c97cbd0986a31ead3c4de 272 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 6 264 2.0E-55 T 25-04-2016 IPR000150 Cof protein GO:0016787 SMA_RS07605 09800cc7d96c97cbd0986a31ead3c4de 272 Gene3D G3DSA:3.40.50.1000 1 77 2.2E-54 T 25-04-2016 IPR023214 HAD-like domain SMA_RS07605 09800cc7d96c97cbd0986a31ead3c4de 272 Gene3D G3DSA:3.40.50.1000 184 270 2.2E-54 T 25-04-2016 IPR023214 HAD-like domain SMA_RS07605 09800cc7d96c97cbd0986a31ead3c4de 272 Pfam PF08282 haloacid dehalogenase-like hydrolase 7 264 1.0E-63 T 25-04-2016 IPR023214 HAD-like domain SMA_RS07605 09800cc7d96c97cbd0986a31ead3c4de 272 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 6 237 3.8E-29 T 25-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 SMA_RS01975 6c264df4f3225a871403af3080959dbf 348 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 233 318 1.8E-19 T 25-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 SMA_RS01975 6c264df4f3225a871403af3080959dbf 348 Gene3D G3DSA:3.40.50.300 3 259 7.5E-78 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS01975 6c264df4f3225a871403af3080959dbf 348 Pfam PF00005 ABC transporter 27 183 3.0E-29 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMA_RS01975 6c264df4f3225a871403af3080959dbf 348 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 235 297 7.3E-14 T 25-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 SMA_RS01975 6c264df4f3225a871403af3080959dbf 348 PANTHER PTHR24220 8 325 2.1E-161 T 25-04-2016 SMA_RS01975 6c264df4f3225a871403af3080959dbf 348 PANTHER PTHR24220:SF535 8 325 2.1E-161 T 25-04-2016 SMA_RS01975 6c264df4f3225a871403af3080959dbf 348 SMART SM00382 35 233 1.4E-15 T 25-04-2016 IPR003593 AAA+ ATPase domain SMA_RS01975 6c264df4f3225a871403af3080959dbf 348 SUPERFAMILY SSF52540 6 254 6.83E-71 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS01235 f11cc0bd114dbf4dd08f928d7aeb90ff 466 SUPERFAMILY SSF51445 1 464 2.02E-160 T 25-04-2016 IPR017853 Glycoside hydrolase superfamily SMA_RS01235 f11cc0bd114dbf4dd08f928d7aeb90ff 466 TIGRFAM TIGR01233 lacG: 6-phospho-beta-galactosidase 3 466 4.9E-221 T 25-04-2016 IPR005928 6-phospho-beta-galactosidase GO:0019512|GO:0033920 KEGG: 00052+3.2.1.85|UniPathway: UPA00542 SMA_RS01235 f11cc0bd114dbf4dd08f928d7aeb90ff 466 PANTHER PTHR10353 1 466 2.6E-223 T 25-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 SMA_RS01235 f11cc0bd114dbf4dd08f928d7aeb90ff 466 PRINTS PR00131 Glycosyl hydrolase family 1 signature 288 302 1.1E-21 T 25-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 SMA_RS01235 f11cc0bd114dbf4dd08f928d7aeb90ff 466 PRINTS PR00131 Glycosyl hydrolase family 1 signature 434 446 1.1E-21 T 25-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 SMA_RS01235 f11cc0bd114dbf4dd08f928d7aeb90ff 466 PRINTS PR00131 Glycosyl hydrolase family 1 signature 410 427 1.1E-21 T 25-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 SMA_RS01235 f11cc0bd114dbf4dd08f928d7aeb90ff 466 PRINTS PR00131 Glycosyl hydrolase family 1 signature 389 400 1.1E-21 T 25-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 SMA_RS01235 f11cc0bd114dbf4dd08f928d7aeb90ff 466 PRINTS PR00131 Glycosyl hydrolase family 1 signature 369 377 1.1E-21 T 25-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 SMA_RS01235 f11cc0bd114dbf4dd08f928d7aeb90ff 466 Pfam PF00232 Glycosyl hydrolase family 1 3 463 6.6E-156 T 25-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 SMA_RS01235 f11cc0bd114dbf4dd08f928d7aeb90ff 466 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 369 377 - T 25-04-2016 IPR018120 Glycoside hydrolase family 1, active site SMA_RS01235 f11cc0bd114dbf4dd08f928d7aeb90ff 466 PANTHER PTHR10353:SF62 1 466 2.6E-223 T 25-04-2016 SMA_RS01235 f11cc0bd114dbf4dd08f928d7aeb90ff 466 Gene3D G3DSA:3.20.20.80 2 463 3.2E-150 T 25-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 SMA_RS07685 d63f7c4648ee35333312117c4a69c487 306 SMART SM00387 204 306 5.9E-27 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMA_RS07685 d63f7c4648ee35333312117c4a69c487 306 Gene3D G3DSA:1.10.287.130 89 154 6.2E-16 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMA_RS07685 d63f7c4648ee35333312117c4a69c487 306 SUPERFAMILY SSF47384 80 157 5.69E-15 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMA_RS07685 d63f7c4648ee35333312117c4a69c487 306 SUPERFAMILY SSF55874 147 305 1.06E-34 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMA_RS07685 d63f7c4648ee35333312117c4a69c487 306 Gene3D G3DSA:3.30.565.10 161 305 1.4E-35 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMA_RS07685 d63f7c4648ee35333312117c4a69c487 306 PANTHER PTHR24423 74 305 2.5E-58 T 25-04-2016 SMA_RS07685 d63f7c4648ee35333312117c4a69c487 306 PANTHER PTHR24423 1 9 2.5E-58 T 25-04-2016 SMA_RS07685 d63f7c4648ee35333312117c4a69c487 306 Pfam PF00512 His Kinase A (phospho-acceptor) domain 95 157 8.4E-15 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMA_RS07685 d63f7c4648ee35333312117c4a69c487 306 SMART SM00388 95 158 8.9E-16 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMA_RS07685 d63f7c4648ee35333312117c4a69c487 306 PRINTS PR00344 Bacterial sensor protein C-terminal signature 268 286 2.88E-9 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMA_RS07685 d63f7c4648ee35333312117c4a69c487 306 PRINTS PR00344 Bacterial sensor protein C-terminal signature 239 253 2.88E-9 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMA_RS07685 d63f7c4648ee35333312117c4a69c487 306 PRINTS PR00344 Bacterial sensor protein C-terminal signature 257 267 2.88E-9 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMA_RS07685 d63f7c4648ee35333312117c4a69c487 306 PRINTS PR00344 Bacterial sensor protein C-terminal signature 291 304 2.88E-9 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMA_RS07685 d63f7c4648ee35333312117c4a69c487 306 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 205 305 1.5E-17 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMA_RS08495 61f8f0d68d1d8e9dc274c2c667cbc8d9 457 Pfam PF02386 Cation transport protein 18 440 5.0E-61 T 25-04-2016 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 SMA_RS08495 61f8f0d68d1d8e9dc274c2c667cbc8d9 457 PANTHER PTHR32024 1 457 3.1E-130 T 25-04-2016 SMA_RS08495 61f8f0d68d1d8e9dc274c2c667cbc8d9 457 PANTHER PTHR32024:SF1 1 457 3.1E-130 T 25-04-2016 SMA_RS06585 bb01fe60078edece2db58ef523f48979 663 SMART SM00487 14 430 2.1E-28 T 25-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain SMA_RS06585 bb01fe60078edece2db58ef523f48979 663 Pfam PF02151 UvrB/uvrC motif 628 661 5.8E-7 T 25-04-2016 IPR001943 UVR domain GO:0005515 SMA_RS06585 bb01fe60078edece2db58ef523f48979 663 Pfam PF04851 Type III restriction enzyme, res subunit 18 143 1.1E-11 T 25-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 SMA_RS06585 bb01fe60078edece2db58ef523f48979 663 Gene3D G3DSA:4.10.860.10 607 662 1.4E-15 T 25-04-2016 IPR001943 UVR domain GO:0005515 SMA_RS06585 bb01fe60078edece2db58ef523f48979 663 Gene3D G3DSA:3.40.50.300 423 587 1.3E-40 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS06585 bb01fe60078edece2db58ef523f48979 663 SUPERFAMILY SSF46600 614 661 7.06E-10 T 25-04-2016 IPR001943 UVR domain GO:0005515 SMA_RS06585 bb01fe60078edece2db58ef523f48979 663 Hamap MF_00204 UvrABC system protein B [uvrB]. 8 662 43.915 T 25-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 SMA_RS06585 bb01fe60078edece2db58ef523f48979 663 Pfam PF00271 Helicase conserved C-terminal domain 438 549 1.5E-19 T 25-04-2016 IPR001650 Helicase, C-terminal SMA_RS06585 bb01fe60078edece2db58ef523f48979 663 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 9 660 0.0 T 25-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 SMA_RS06585 bb01fe60078edece2db58ef523f48979 663 SUPERFAMILY SSF52540 334 602 4.58E-36 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS06585 bb01fe60078edece2db58ef523f48979 663 PANTHER PTHR24029 4 662 0.0 T 25-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 SMA_RS06585 bb01fe60078edece2db58ef523f48979 663 Gene3D G3DSA:3.40.50.300 121 172 9.9E-4 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS06585 bb01fe60078edece2db58ef523f48979 663 Gene3D G3DSA:3.40.50.300 234 279 9.9E-4 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS06585 bb01fe60078edece2db58ef523f48979 663 Pfam PF12344 Ultra-violet resistance protein B 556 598 2.9E-24 T 25-04-2016 IPR024759 UvrB, YAD/RRR-motif-containing domain SMA_RS06585 bb01fe60078edece2db58ef523f48979 663 Gene3D G3DSA:3.40.50.300 10 94 1.7E-53 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS06585 bb01fe60078edece2db58ef523f48979 663 Gene3D G3DSA:3.40.50.300 283 343 1.7E-53 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS06585 bb01fe60078edece2db58ef523f48979 663 Gene3D G3DSA:3.40.50.300 393 414 1.7E-53 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS06585 bb01fe60078edece2db58ef523f48979 663 Gene3D G3DSA:3.30.2060.10 173 233 4.8E-13 T 25-04-2016 SMA_RS06585 bb01fe60078edece2db58ef523f48979 663 SUPERFAMILY SSF52540 8 419 1.01E-140 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS06585 bb01fe60078edece2db58ef523f48979 663 SMART SM00490 464 550 3.0E-20 T 25-04-2016 IPR001650 Helicase, C-terminal SMA_RS03225 da412e4512d621f9151eb249c3b947a0 106 PANTHER PTHR30561 1 106 1.4E-43 T 25-04-2016 SMA_RS03225 da412e4512d621f9151eb249c3b947a0 106 Pfam PF00893 Small Multidrug Resistance protein 1 93 1.8E-28 T 25-04-2016 IPR000390 Small multidrug resistance protein family GO:0016021 SMA_RS03225 da412e4512d621f9151eb249c3b947a0 106 SUPERFAMILY SSF103481 4 104 7.06E-20 T 25-04-2016 SMA_RS03225 da412e4512d621f9151eb249c3b947a0 106 PANTHER PTHR30561:SF0 1 106 1.4E-43 T 25-04-2016 SMA_RS01710 e253728bb7479bf787244727459dd110 226 Pfam PF13610 DDE domain 72 203 1.7E-42 T 25-04-2016 IPR032874 DDE domain SMA_RS01710 e253728bb7479bf787244727459dd110 226 Gene3D G3DSA:3.30.420.10 68 143 3.6E-7 T 25-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMA_RS01710 e253728bb7479bf787244727459dd110 226 PANTHER PTHR35528:SF1 1 176 3.1E-41 T 25-04-2016 SMA_RS01710 e253728bb7479bf787244727459dd110 226 SUPERFAMILY SSF53098 69 184 1.02E-9 T 25-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMA_RS01710 e253728bb7479bf787244727459dd110 226 PANTHER PTHR35528 1 176 3.1E-41 T 25-04-2016 SMA_RS01755 e253728bb7479bf787244727459dd110 226 Pfam PF13610 DDE domain 72 203 1.7E-42 T 25-04-2016 IPR032874 DDE domain SMA_RS01755 e253728bb7479bf787244727459dd110 226 Gene3D G3DSA:3.30.420.10 68 143 3.6E-7 T 25-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMA_RS01755 e253728bb7479bf787244727459dd110 226 PANTHER PTHR35528:SF1 1 176 3.1E-41 T 25-04-2016 SMA_RS01755 e253728bb7479bf787244727459dd110 226 SUPERFAMILY SSF53098 69 184 1.02E-9 T 25-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMA_RS01755 e253728bb7479bf787244727459dd110 226 PANTHER PTHR35528 1 176 3.1E-41 T 25-04-2016 SMA_RS08020 b4927aba11e94d21227c089df01082cf 182 Gene3D G3DSA:3.40.630.30 1 178 1.6E-55 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMA_RS08020 b4927aba11e94d21227c089df01082cf 182 SUPERFAMILY SSF55729 1 154 1.8E-17 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMA_RS02155 e788cccaed586b1cffd5bbf29b4ead61 139 PANTHER PTHR23089:SF14 1 120 4.8E-65 T 25-04-2016 SMA_RS02155 e788cccaed586b1cffd5bbf29b4ead61 139 PANTHER PTHR23089 1 120 4.8E-65 T 25-04-2016 IPR001310 Histidine triad (HIT) protein SMA_RS02155 e788cccaed586b1cffd5bbf29b4ead61 139 Gene3D G3DSA:3.30.428.10 3 135 8.8E-41 T 25-04-2016 IPR011146 HIT-like domain GO:0003824 SMA_RS02155 e788cccaed586b1cffd5bbf29b4ead61 139 PRINTS PR00332 Histidine triad family signature 5 21 3.4E-17 T 25-04-2016 IPR001310 Histidine triad (HIT) protein SMA_RS02155 e788cccaed586b1cffd5bbf29b4ead61 139 PRINTS PR00332 Histidine triad family signature 26 44 3.4E-17 T 25-04-2016 IPR001310 Histidine triad (HIT) protein SMA_RS02155 e788cccaed586b1cffd5bbf29b4ead61 139 PRINTS PR00332 Histidine triad family signature 93 103 3.4E-17 T 25-04-2016 IPR001310 Histidine triad (HIT) protein SMA_RS02155 e788cccaed586b1cffd5bbf29b4ead61 139 Pfam PF01230 HIT domain 13 107 1.2E-24 T 25-04-2016 IPR001310 Histidine triad (HIT) protein SMA_RS02155 e788cccaed586b1cffd5bbf29b4ead61 139 SUPERFAMILY SSF54197 1 133 2.78E-40 T 25-04-2016 IPR011146 HIT-like domain GO:0003824 SMA_RS03110 f163c0a48c594d9689af7023a2536a03 158 SUPERFAMILY SSF50037 82 152 1.88E-18 T 25-04-2016 IPR008988 Transcriptional repressor, C-terminal SMA_RS03110 f163c0a48c594d9689af7023a2536a03 158 Pfam PF04023 FeoA domain 80 149 3.4E-13 T 25-04-2016 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 SMA_RS03110 f163c0a48c594d9689af7023a2536a03 158 Pfam PF04023 FeoA domain 3 70 2.7E-4 T 25-04-2016 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 SMA_RS03110 f163c0a48c594d9689af7023a2536a03 158 SMART SM00899 1 71 0.47 T 25-04-2016 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 SMA_RS03110 f163c0a48c594d9689af7023a2536a03 158 SMART SM00899 79 151 1.9E-19 T 25-04-2016 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 SMA_RS03110 f163c0a48c594d9689af7023a2536a03 158 PANTHER PTHR33238 80 155 6.8E-20 T 25-04-2016 SMA_RS03110 f163c0a48c594d9689af7023a2536a03 158 SUPERFAMILY SSF50037 3 71 4.12E-7 T 25-04-2016 IPR008988 Transcriptional repressor, C-terminal SMA_RS07610 868f06e5f37193b65f58723378bef383 265 Gene3D G3DSA:3.30.1240.10 83 178 2.7E-26 T 25-04-2016 SMA_RS07610 868f06e5f37193b65f58723378bef383 265 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 4 259 8.6E-41 T 25-04-2016 IPR000150 Cof protein GO:0016787 SMA_RS07610 868f06e5f37193b65f58723378bef383 265 Gene3D G3DSA:3.40.50.1000 179 263 1.3E-38 T 25-04-2016 IPR023214 HAD-like domain SMA_RS07610 868f06e5f37193b65f58723378bef383 265 Gene3D G3DSA:3.40.50.1000 1 73 1.3E-38 T 25-04-2016 IPR023214 HAD-like domain SMA_RS07610 868f06e5f37193b65f58723378bef383 265 SUPERFAMILY SSF56784 1 263 4.73E-56 T 25-04-2016 IPR023214 HAD-like domain SMA_RS07610 868f06e5f37193b65f58723378bef383 265 Pfam PF08282 haloacid dehalogenase-like hydrolase 5 259 1.9E-51 T 25-04-2016 IPR023214 HAD-like domain SMA_RS07610 868f06e5f37193b65f58723378bef383 265 PANTHER PTHR10000 1 265 1.1E-59 T 25-04-2016 SMA_RS07610 868f06e5f37193b65f58723378bef383 265 PANTHER PTHR10000:SF27 1 265 1.1E-59 T 25-04-2016 SMA_RS07610 868f06e5f37193b65f58723378bef383 265 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 4 232 9.9E-19 T 25-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 SMA_RS02295 2fe978a34b40ed2e580d6b20ecdb28b9 305 PANTHER PTHR30075 1 305 8.0E-241 T 25-04-2016 SMA_RS02295 2fe978a34b40ed2e580d6b20ecdb28b9 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 137 157 2.1E-63 T 25-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SMA_RS02295 2fe978a34b40ed2e580d6b20ecdb28b9 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 59 74 2.1E-63 T 25-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SMA_RS02295 2fe978a34b40ed2e580d6b20ecdb28b9 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 160 175 2.1E-63 T 25-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SMA_RS02295 2fe978a34b40ed2e580d6b20ecdb28b9 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 80 100 2.1E-63 T 25-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SMA_RS02295 2fe978a34b40ed2e580d6b20ecdb28b9 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 245 261 2.1E-63 T 25-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SMA_RS02295 2fe978a34b40ed2e580d6b20ecdb28b9 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 111 135 2.1E-63 T 25-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SMA_RS02295 2fe978a34b40ed2e580d6b20ecdb28b9 305 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 6 291 6.0E-152 T 25-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SMA_RS02295 2fe978a34b40ed2e580d6b20ecdb28b9 305 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 7 283 8.0E-144 T 25-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SMA_RS02295 2fe978a34b40ed2e580d6b20ecdb28b9 305 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 5 285 56.751 T 25-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SMA_RS02295 2fe978a34b40ed2e580d6b20ecdb28b9 305 Gene3D G3DSA:1.20.58.180 209 290 7.0E-37 T 25-04-2016 SMA_RS02295 2fe978a34b40ed2e580d6b20ecdb28b9 305 SUPERFAMILY SSF55681 6 284 4.22E-127 T 25-04-2016 SMA_RS02295 2fe978a34b40ed2e580d6b20ecdb28b9 305 Gene3D G3DSA:3.30.930.10 2 207 5.0E-99 T 25-04-2016 SMA_RS03790 bb642bd6da03d7176d194d774166fdc9 424 Gene3D G3DSA:3.65.10.10 22 225 4.3E-65 T 25-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 SMA_RS03790 bb642bd6da03d7176d194d774166fdc9 424 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 2 420 4.9E-160 T 25-04-2016 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SMA_RS03790 bb642bd6da03d7176d194d774166fdc9 424 PANTHER PTHR21090 1 423 7.1E-248 T 25-04-2016 SMA_RS03790 bb642bd6da03d7176d194d774166fdc9 424 SUPERFAMILY SSF55205 7 422 8.67E-134 T 25-04-2016 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 SMA_RS03790 bb642bd6da03d7176d194d774166fdc9 424 Gene3D G3DSA:3.65.10.10 226 421 4.1E-55 T 25-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 SMA_RS03790 bb642bd6da03d7176d194d774166fdc9 424 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 10 411 1.5E-103 T 25-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 SMA_RS03790 bb642bd6da03d7176d194d774166fdc9 424 PANTHER PTHR21090:SF19 1 423 7.1E-248 T 25-04-2016 SMA_RS03790 bb642bd6da03d7176d194d774166fdc9 424 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 421 44.083 T 25-04-2016 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SMA_RS03055 10a3f7f1f374ffc59d57f675db9d0c5d 263 PANTHER PTHR32219 3 261 3.4E-61 T 25-04-2016 SMA_RS03055 10a3f7f1f374ffc59d57f675db9d0c5d 263 Gene3D G3DSA:3.10.290.10 183 238 3.0E-18 T 25-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SMA_RS03055 10a3f7f1f374ffc59d57f675db9d0c5d 263 Pfam PF01479 S4 domain 185 231 1.7E-8 T 25-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SMA_RS03055 10a3f7f1f374ffc59d57f675db9d0c5d 263 SMART SM00363 185 247 6.8E-11 T 25-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SMA_RS03055 10a3f7f1f374ffc59d57f675db9d0c5d 263 PANTHER PTHR32219:SF5 3 261 3.4E-61 T 25-04-2016 SMA_RS03055 10a3f7f1f374ffc59d57f675db9d0c5d 263 SUPERFAMILY SSF55174 51 130 7.07E-30 T 25-04-2016 SMA_RS03055 10a3f7f1f374ffc59d57f675db9d0c5d 263 SUPERFAMILY SSF55174 182 252 7.07E-30 T 25-04-2016 SMA_RS07130 1e7dfea7b3061b4ea00276bf923851fa 262 PANTHER PTHR21343 13 261 2.8E-101 T 25-04-2016 SMA_RS07130 1e7dfea7b3061b4ea00276bf923851fa 262 PANTHER PTHR21343:SF9 13 261 2.8E-101 T 25-04-2016 SMA_RS07130 1e7dfea7b3061b4ea00276bf923851fa 262 Gene3D G3DSA:3.40.50.880 51 225 6.7E-16 T 25-04-2016 IPR029062 Class I glutamine amidotransferase-like SMA_RS07130 1e7dfea7b3061b4ea00276bf923851fa 262 SUPERFAMILY SSF52317 35 207 4.3E-27 T 25-04-2016 IPR029062 Class I glutamine amidotransferase-like SMA_RS07130 1e7dfea7b3061b4ea00276bf923851fa 262 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 19 214 1.0E-43 T 25-04-2016 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 UniPathway: UPA00148 SMA_RS08045 6f8bb371980fe59c8a5949389c9dc050 288 PANTHER PTHR21091 9 234 1.0E-85 T 25-04-2016 SMA_RS08045 6f8bb371980fe59c8a5949389c9dc050 288 SUPERFAMILY SSF53790 13 231 1.31E-79 T 25-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 SMA_RS08045 6f8bb371980fe59c8a5949389c9dc050 288 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 16 286 2.9E-78 T 25-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SMA_RS08045 6f8bb371980fe59c8a5949389c9dc050 288 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 15 213 3.3E-23 T 25-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 SMA_RS08045 6f8bb371980fe59c8a5949389c9dc050 288 PANTHER PTHR21091:SF18 9 234 1.0E-85 T 25-04-2016 SMA_RS08045 6f8bb371980fe59c8a5949389c9dc050 288 Gene3D G3DSA:3.40.1010.10 14 123 2.2E-16 T 25-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 SMA_RS08045 6f8bb371980fe59c8a5949389c9dc050 288 Gene3D G3DSA:3.30.950.10 124 235 6.9E-39 T 25-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 SMA_RS08045 6f8bb371980fe59c8a5949389c9dc050 288 PIRSF PIRSF005917 4 288 1.0E-94 T 25-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SMA_RS08045 6f8bb371980fe59c8a5949389c9dc050 288 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 15 233 35.772 T 25-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SMA_RS08045 6f8bb371980fe59c8a5949389c9dc050 288 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 93 104 - T 25-04-2016 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SMA_RS10085 4e0aad4d4659e7c718bf772d0a4fd2cf 631 Gene3D G3DSA:3.40.390.10 429 631 5.8E-90 T 25-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 SMA_RS10085 4e0aad4d4659e7c718bf772d0a4fd2cf 631 Gene3D G3DSA:3.40.390.10 277 387 5.8E-90 T 25-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 SMA_RS10085 4e0aad4d4659e7c718bf772d0a4fd2cf 631 PANTHER PTHR11733:SF65 6 631 1.6E-135 T 25-04-2016 SMA_RS10085 4e0aad4d4659e7c718bf772d0a4fd2cf 631 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 430 442 2.8E-21 T 25-04-2016 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 SMA_RS10085 4e0aad4d4659e7c718bf772d0a4fd2cf 631 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 469 485 2.8E-21 T 25-04-2016 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 SMA_RS10085 4e0aad4d4659e7c718bf772d0a4fd2cf 631 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 448 460 2.8E-21 T 25-04-2016 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 SMA_RS10085 4e0aad4d4659e7c718bf772d0a4fd2cf 631 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 539 550 2.8E-21 T 25-04-2016 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 SMA_RS10085 4e0aad4d4659e7c718bf772d0a4fd2cf 631 Pfam PF05649 Peptidase family M13 5 384 5.4E-60 T 25-04-2016 IPR008753 Peptidase M13, N-terminal domain GO:0006508 SMA_RS10085 4e0aad4d4659e7c718bf772d0a4fd2cf 631 PANTHER PTHR11733 6 631 1.6E-135 T 25-04-2016 IPR000718 Peptidase M13 GO:0004222|GO:0006508 SMA_RS10085 4e0aad4d4659e7c718bf772d0a4fd2cf 631 SUPERFAMILY SSF55486 5 631 1.45E-187 T 25-04-2016 SMA_RS10085 4e0aad4d4659e7c718bf772d0a4fd2cf 631 Pfam PF01431 Peptidase family M13 438 628 1.7E-62 T 25-04-2016 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 SMA_RS04155 a82be5dacdbc75ce31889f6deabb925c 86 PANTHER PTHR33677:SF2 4 85 2.9E-29 T 25-04-2016 SMA_RS04155 a82be5dacdbc75ce31889f6deabb925c 86 PANTHER PTHR33677 4 85 2.9E-29 T 25-04-2016 SMA_RS04155 a82be5dacdbc75ce31889f6deabb925c 86 Pfam PF02583 Metal-sensitive transcriptional repressor 5 83 3.4E-25 T 25-04-2016 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 SMA_RS02710 bd3a44c476a27f21f9f831b27b67bdf5 316 Pfam PF00268 Ribonucleotide reductase, small chain 6 271 9.0E-69 T 25-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 SMA_RS02710 bd3a44c476a27f21f9f831b27b67bdf5 316 PANTHER PTHR23409 11 316 5.7E-55 T 25-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 SMA_RS02710 bd3a44c476a27f21f9f831b27b67bdf5 316 TIGRFAM TIGR04171 RNR_1b_NrdF: ribonucleoside-diphosphate reductase, class 1b, beta subunit 4 316 3.7E-125 T 25-04-2016 IPR026494 Ribonucleoside reductase subunit beta, NrdF GO:0005971|GO:0009263 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 SMA_RS02710 bd3a44c476a27f21f9f831b27b67bdf5 316 Gene3D G3DSA:1.10.620.20 5 282 2.1E-70 T 25-04-2016 IPR012348 Ribonucleotide reductase-related GO:0016491|GO:0055114 Reactome: REACT_1698 SMA_RS02710 bd3a44c476a27f21f9f831b27b67bdf5 316 SUPERFAMILY SSF47240 4 314 2.07E-82 T 25-04-2016 IPR009078 Ferritin-like superfamily SMA_RS09175 dd7f655298e230c23b1f17b6f37e503f 398 SUPERFAMILY SSF53748 3 397 3.77E-143 T 25-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SMA_RS09175 dd7f655298e230c23b1f17b6f37e503f 398 Gene3D G3DSA:3.40.50.1260 4 185 3.8E-68 T 25-04-2016 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SMA_RS09175 dd7f655298e230c23b1f17b6f37e503f 398 Pfam PF00162 Phosphoglycerate kinase 6 387 2.9E-146 T 25-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SMA_RS09175 dd7f655298e230c23b1f17b6f37e503f 398 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 8 397 39.649 T 25-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SMA_RS09175 dd7f655298e230c23b1f17b6f37e503f 398 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 15 25 - T 25-04-2016 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SMA_RS09175 dd7f655298e230c23b1f17b6f37e503f 398 Gene3D G3DSA:3.40.50.1270 186 385 8.7E-76 T 25-04-2016 IPR015901 Phosphoglycerate kinase, C-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SMA_RS09175 dd7f655298e230c23b1f17b6f37e503f 398 PIRSF PIRSF000724 1 398 3.6E-131 T 25-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SMA_RS09175 dd7f655298e230c23b1f17b6f37e503f 398 PANTHER PTHR11406 1 398 1.1E-199 T 25-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SMA_RS09175 dd7f655298e230c23b1f17b6f37e503f 398 PRINTS PR00477 Phosphoglycerate kinase family signature 316 341 2.2E-91 T 25-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SMA_RS09175 dd7f655298e230c23b1f17b6f37e503f 398 PRINTS PR00477 Phosphoglycerate kinase family signature 197 216 2.2E-91 T 25-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SMA_RS09175 dd7f655298e230c23b1f17b6f37e503f 398 PRINTS PR00477 Phosphoglycerate kinase family signature 143 165 2.2E-91 T 25-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SMA_RS09175 dd7f655298e230c23b1f17b6f37e503f 398 PRINTS PR00477 Phosphoglycerate kinase family signature 174 196 2.2E-91 T 25-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SMA_RS09175 dd7f655298e230c23b1f17b6f37e503f 398 PRINTS PR00477 Phosphoglycerate kinase family signature 373 390 2.2E-91 T 25-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SMA_RS09175 dd7f655298e230c23b1f17b6f37e503f 398 PRINTS PR00477 Phosphoglycerate kinase family signature 31 53 2.2E-91 T 25-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SMA_RS09175 dd7f655298e230c23b1f17b6f37e503f 398 PRINTS PR00477 Phosphoglycerate kinase family signature 350 361 2.2E-91 T 25-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SMA_RS09175 dd7f655298e230c23b1f17b6f37e503f 398 PRINTS PR00477 Phosphoglycerate kinase family signature 110 125 2.2E-91 T 25-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SMA_RS09175 dd7f655298e230c23b1f17b6f37e503f 398 PRINTS PR00477 Phosphoglycerate kinase family signature 10 26 2.2E-91 T 25-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SMA_RS06225 6b0e554fd82d688ef4a765a5e2cb18e8 420 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 18 413 8.9E-120 T 25-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 SMA_RS06225 6b0e554fd82d688ef4a765a5e2cb18e8 420 Pfam PF00860 Permease family 19 392 5.8E-93 T 25-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 SMA_RS06225 6b0e554fd82d688ef4a765a5e2cb18e8 420 PANTHER PTHR11119 7 420 9.3E-149 T 25-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 SMA_RS06225 6b0e554fd82d688ef4a765a5e2cb18e8 420 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 339 359 - T 25-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 SMA_RS06225 6b0e554fd82d688ef4a765a5e2cb18e8 420 PANTHER PTHR11119:SF49 7 420 9.3E-149 T 25-04-2016 SMA_RS09940 31cf05e349c9f2839b4fa00f8f03ad6c 168 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 13 154 43.013 T 25-04-2016 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 SMA_RS09940 31cf05e349c9f2839b4fa00f8f03ad6c 168 PANTHER PTHR11079 10 158 2.0E-52 T 25-04-2016 SMA_RS09940 31cf05e349c9f2839b4fa00f8f03ad6c 168 Gene3D G3DSA:3.40.140.10 5 152 1.5E-57 T 25-04-2016 SMA_RS09940 31cf05e349c9f2839b4fa00f8f03ad6c 168 SUPERFAMILY SSF53927 4 158 4.52E-49 T 25-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 SMA_RS09940 31cf05e349c9f2839b4fa00f8f03ad6c 168 PANTHER PTHR11079:SF72 10 158 2.0E-52 T 25-04-2016 SMA_RS09940 31cf05e349c9f2839b4fa00f8f03ad6c 168 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 58 95 - T 25-04-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 SMA_RS09940 31cf05e349c9f2839b4fa00f8f03ad6c 168 Pfam PF14437 MafB19-like deaminase 8 154 2.8E-35 T 25-04-2016 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 SMA_RS08145 9560e9aa82f859d70675ae2ea8b7f0c9 483 SUPERFAMILY SSF53244 329 473 2.09E-29 T 25-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SMA_RS08145 9560e9aa82f859d70675ae2ea8b7f0c9 483 PANTHER PTHR23135:SF4 23 471 6.9E-123 T 25-04-2016 SMA_RS08145 9560e9aa82f859d70675ae2ea8b7f0c9 483 Gene3D G3DSA:3.40.1190.10 108 332 2.5E-52 T 25-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SMA_RS08145 9560e9aa82f859d70675ae2ea8b7f0c9 483 PANTHER PTHR23135 23 471 6.9E-123 T 25-04-2016 SMA_RS08145 9560e9aa82f859d70675ae2ea8b7f0c9 483 SUPERFAMILY SSF53623 78 341 1.27E-48 T 25-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SMA_RS08145 9560e9aa82f859d70675ae2ea8b7f0c9 483 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 36 482 9.7E-91 T 25-04-2016 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 UniPathway: UPA00219 SMA_RS08145 9560e9aa82f859d70675ae2ea8b7f0c9 483 Pfam PF02875 Mur ligase family, glutamate ligase domain 329 415 2.6E-16 T 25-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SMA_RS08145 9560e9aa82f859d70675ae2ea8b7f0c9 483 Pfam PF08245 Mur ligase middle domain 118 309 1.1E-32 T 25-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SMA_RS08145 9560e9aa82f859d70675ae2ea8b7f0c9 483 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 2 482 27.608 T 25-04-2016 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 UniPathway: UPA00219 SMA_RS08145 9560e9aa82f859d70675ae2ea8b7f0c9 483 Gene3D G3DSA:3.40.1390.10 31 107 1.4E-8 T 25-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 SMA_RS08145 9560e9aa82f859d70675ae2ea8b7f0c9 483 Gene3D G3DSA:3.90.190.20 333 471 2.6E-33 T 25-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SMA_RS08145 9560e9aa82f859d70675ae2ea8b7f0c9 483 SUPERFAMILY SSF63418 16 108 5.49E-15 T 25-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 SMA_RS04755 db99e8669b7402e45164c06f97dcfbcd 221 Gene3D G3DSA:1.10.287.860 146 200 3.2E-24 T 25-04-2016 SMA_RS04755 db99e8669b7402e45164c06f97dcfbcd 221 SMART SM00954 42 163 7.2E-47 T 25-04-2016 IPR007685 RelA/SpoT GO:0015969 SMA_RS04755 db99e8669b7402e45164c06f97dcfbcd 221 SUPERFAMILY SSF81301 1 196 5.56E-59 T 25-04-2016 SMA_RS04755 db99e8669b7402e45164c06f97dcfbcd 221 PANTHER PTHR21262 2 201 2.4E-115 T 25-04-2016 SMA_RS04755 db99e8669b7402e45164c06f97dcfbcd 221 Pfam PF04607 Region found in RelA / SpoT proteins 42 161 4.6E-38 T 25-04-2016 IPR007685 RelA/SpoT GO:0015969 SMA_RS04755 db99e8669b7402e45164c06f97dcfbcd 221 PANTHER PTHR21262:SF11 2 201 2.4E-115 T 25-04-2016 SMA_RS04755 db99e8669b7402e45164c06f97dcfbcd 221 Gene3D G3DSA:3.30.460.10 2 143 3.6E-41 T 25-04-2016 SMA_RS08705 f6bfc11246e6347435a696e5424c9e70 588 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 340 557 9.7E-27 T 25-04-2016 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 SMA_RS08705 f6bfc11246e6347435a696e5424c9e70 588 SUPERFAMILY SSF51695 336 561 2.59E-53 T 25-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 SMA_RS08705 f6bfc11246e6347435a696e5424c9e70 588 PANTHER PTHR23344 70 588 5.9E-76 T 25-04-2016 IPR004129 Glycerophosphoryl diester phosphodiesterase GO:0008889 SMA_RS08705 f6bfc11246e6347435a696e5424c9e70 588 PANTHER PTHR23344:SF23 70 588 5.9E-76 T 25-04-2016 SMA_RS08705 f6bfc11246e6347435a696e5424c9e70 588 Pfam PF10110 Membrane domain of glycerophosphoryl diester phosphodiesterase 8 321 5.1E-54 T 25-04-2016 IPR018476 Glycerophosphoryl diester phosphodiesterase, membrane domain SMA_RS08705 f6bfc11246e6347435a696e5424c9e70 588 Gene3D G3DSA:3.20.20.190 330 562 1.6E-51 T 25-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 SMA_RS02720 190fe6ae0fc49a5d4af12305bf64a5bb 190 Pfam PF13420 Acetyltransferase (GNAT) domain 5 165 3.6E-48 T 25-04-2016 SMA_RS02720 190fe6ae0fc49a5d4af12305bf64a5bb 190 PANTHER PTHR23091 1 105 3.5E-16 T 25-04-2016 SMA_RS02720 190fe6ae0fc49a5d4af12305bf64a5bb 190 PANTHER PTHR23091:SF183 1 105 3.5E-16 T 25-04-2016 SMA_RS02720 190fe6ae0fc49a5d4af12305bf64a5bb 190 Gene3D G3DSA:3.40.630.30 1 178 6.8E-42 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMA_RS02720 190fe6ae0fc49a5d4af12305bf64a5bb 190 SUPERFAMILY SSF55729 3 171 1.52E-27 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMA_RS09900 80a00baccf36e843c711986f3aa8d7e7 175 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 3 173 7.3E-38 T 25-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase SMA_RS09900 80a00baccf36e843c711986f3aa8d7e7 175 Gene3D G3DSA:3.40.50.10420 3 174 6.9E-43 T 25-04-2016 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain SMA_RS09900 80a00baccf36e843c711986f3aa8d7e7 175 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 3 173 7.9E-46 T 25-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase SMA_RS09900 80a00baccf36e843c711986f3aa8d7e7 175 SUPERFAMILY SSF100950 1 173 2.37E-44 T 25-04-2016 SMA_RS09900 80a00baccf36e843c711986f3aa8d7e7 175 PIRSF PIRSF006806 1 175 2.4E-41 T 25-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase SMA_RS09900 80a00baccf36e843c711986f3aa8d7e7 175 PANTHER PTHR23407 1 156 5.8E-36 T 25-04-2016 SMA_RS09900 80a00baccf36e843c711986f3aa8d7e7 175 PANTHER PTHR23407:SF1 1 156 5.8E-36 T 25-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase SMA_RS07910 a6286292024cce568dfb1151b5641e9f 182 PANTHER PTHR11839:SF9 1 182 8.4E-54 T 25-04-2016 SMA_RS07910 a6286292024cce568dfb1151b5641e9f 182 Pfam PF00293 NUDIX domain 42 158 5.6E-14 T 25-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 SMA_RS07910 a6286292024cce568dfb1151b5641e9f 182 PRINTS PR00502 NUDIX hydrolase family signature 88 103 3.8E-5 T 25-04-2016 IPR020476 NUDIX hydrolase SMA_RS07910 a6286292024cce568dfb1151b5641e9f 182 PRINTS PR00502 NUDIX hydrolase family signature 72 86 3.8E-5 T 25-04-2016 IPR020476 NUDIX hydrolase SMA_RS07910 a6286292024cce568dfb1151b5641e9f 182 Gene3D G3DSA:3.90.79.10 4 179 6.5E-51 T 25-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SMA_RS07910 a6286292024cce568dfb1151b5641e9f 182 SUPERFAMILY SSF55811 6 179 9.07E-44 T 25-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SMA_RS07910 a6286292024cce568dfb1151b5641e9f 182 PANTHER PTHR11839 1 182 8.4E-54 T 25-04-2016 SMA_RS08580 e3195be3e7b0a08600a84ffc30ac6805 228 Gene3D G3DSA:3.40.50.880 1 226 1.3E-45 T 25-04-2016 IPR029062 Class I glutamine amidotransferase-like SMA_RS08580 e3195be3e7b0a08600a84ffc30ac6805 228 PANTHER PTHR11922:SF18 24 228 1.5E-50 T 25-04-2016 SMA_RS08580 e3195be3e7b0a08600a84ffc30ac6805 228 Pfam PF07722 Peptidase C26 5 209 1.3E-64 T 25-04-2016 IPR011697 Peptidase C26 GO:0006541|GO:0016787 SMA_RS08580 e3195be3e7b0a08600a84ffc30ac6805 228 PANTHER PTHR11922 24 228 1.5E-50 T 25-04-2016 SMA_RS08580 e3195be3e7b0a08600a84ffc30ac6805 228 SUPERFAMILY SSF52317 32 226 1.01E-34 T 25-04-2016 IPR029062 Class I glutamine amidotransferase-like SMA_RS08755 c7c6b079a926cc2b7a27c96df0b89366 119 SUPERFAMILY SSF56214 1 117 8.24E-33 T 25-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 SMA_RS08755 c7c6b079a926cc2b7a27c96df0b89366 119 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 1 116 7.3E-26 T 25-04-2016 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 SMA_RS08755 c7c6b079a926cc2b7a27c96df0b89366 119 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 8 116 3.0E-39 T 25-04-2016 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 SMA_RS08755 c7c6b079a926cc2b7a27c96df0b89366 119 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 3 117 22.55 T 25-04-2016 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 SMA_RS08755 c7c6b079a926cc2b7a27c96df0b89366 119 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 6 99 1.7E-19 T 25-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 SMA_RS08755 c7c6b079a926cc2b7a27c96df0b89366 119 Gene3D G3DSA:3.90.470.20 1 117 1.9E-35 T 25-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 SMA_RS08755 c7c6b079a926cc2b7a27c96df0b89366 119 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 3 89 4.1E-25 T 25-04-2016 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 SMA_RS00410 7e4232af564fc470c9f3012ab2fb9b58 132 ProSitePatterns PS00053 Ribosomal protein S8 signature. 102 119 - T 25-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 SMA_RS00410 7e4232af564fc470c9f3012ab2fb9b58 132 Gene3D G3DSA:3.30.1490.10 76 132 1.1E-29 T 25-04-2016 SMA_RS00410 7e4232af564fc470c9f3012ab2fb9b58 132 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 132 33.105 T 25-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 SMA_RS00410 7e4232af564fc470c9f3012ab2fb9b58 132 Pfam PF00410 Ribosomal protein S8 5 132 2.1E-53 T 25-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 SMA_RS00410 7e4232af564fc470c9f3012ab2fb9b58 132 Gene3D G3DSA:3.30.1370.30 2 73 1.2E-30 T 25-04-2016 SMA_RS00410 7e4232af564fc470c9f3012ab2fb9b58 132 SUPERFAMILY SSF56047 2 132 2.49E-49 T 25-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 SMA_RS00410 7e4232af564fc470c9f3012ab2fb9b58 132 PANTHER PTHR11758 1 132 5.2E-68 T 25-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 SMA_RS09125 124a13a00bea987e1148ac1b0080c79b 140 Gene3D G3DSA:3.40.630.30 12 135 5.8E-27 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMA_RS09125 124a13a00bea987e1148ac1b0080c79b 140 Pfam PF13508 Acetyltransferase (GNAT) domain 40 114 2.0E-12 T 25-04-2016 IPR000182 GNAT domain GO:0008080 SMA_RS09125 124a13a00bea987e1148ac1b0080c79b 140 PANTHER PTHR23091 12 136 1.5E-21 T 25-04-2016 SMA_RS09125 124a13a00bea987e1148ac1b0080c79b 140 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 8 133 1.7E-37 T 25-04-2016 IPR006464 Ribosomal-protein-alanine acetyltransferase GO:0006474|GO:0016407 SMA_RS09125 124a13a00bea987e1148ac1b0080c79b 140 SUPERFAMILY SSF55729 10 136 4.22E-24 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMA_RS05855 40a69b697b8bf1c89a6bbd35764c6616 332 PIRSF PIRSF003314 1 332 7.4E-108 T 25-04-2016 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent GO:0004452|GO:0005737|GO:0008299|GO:0010181 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922 SMA_RS05855 40a69b697b8bf1c89a6bbd35764c6616 332 PANTHER PTHR10578 15 210 1.2E-104 T 25-04-2016 SMA_RS05855 40a69b697b8bf1c89a6bbd35764c6616 332 PANTHER PTHR10578 226 332 1.2E-104 T 25-04-2016 SMA_RS05855 40a69b697b8bf1c89a6bbd35764c6616 332 Hamap MF_00354 Isopentenyl-diphosphate delta-isomerase [fni]. 1 323 33.483 T 25-04-2016 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent GO:0004452|GO:0005737|GO:0008299|GO:0010181 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922 SMA_RS05855 40a69b697b8bf1c89a6bbd35764c6616 332 TIGRFAM TIGR02151 IPP_isom_2: isopentenyl-diphosphate delta-isomerase, type 2 3 322 1.6E-113 T 25-04-2016 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent GO:0004452|GO:0005737|GO:0008299|GO:0010181 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922 SMA_RS05855 40a69b697b8bf1c89a6bbd35764c6616 332 PANTHER PTHR10578:SF3 15 210 1.2E-104 T 25-04-2016 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent GO:0004452|GO:0005737|GO:0008299|GO:0010181 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922 SMA_RS05855 40a69b697b8bf1c89a6bbd35764c6616 332 PANTHER PTHR10578:SF3 226 332 1.2E-104 T 25-04-2016 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent GO:0004452|GO:0005737|GO:0008299|GO:0010181 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922 SMA_RS05855 40a69b697b8bf1c89a6bbd35764c6616 332 Gene3D G3DSA:3.20.20.70 19 320 3.7E-111 T 25-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SMA_RS05855 40a69b697b8bf1c89a6bbd35764c6616 332 SUPERFAMILY SSF51395 19 326 5.29E-73 T 25-04-2016 SMA_RS05855 40a69b697b8bf1c89a6bbd35764c6616 332 Pfam PF01070 FMN-dependent dehydrogenase 159 316 2.0E-19 T 25-04-2016 IPR000262 FMN-dependent dehydrogenase GO:0016491 SMA_RS08110 abc99d5a61f142f0b89d7563b262cfa0 196 Gene3D G3DSA:3.90.226.10 9 194 3.3E-78 T 25-04-2016 IPR029045 ClpP/crotonase-like domain SMA_RS08110 abc99d5a61f142f0b89d7563b262cfa0 196 PANTHER PTHR10381 1 194 2.5E-110 T 25-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA SMA_RS08110 abc99d5a61f142f0b89d7563b262cfa0 196 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 110 123 - T 25-04-2016 IPR033135 ClpP, histidine active site SMA_RS08110 abc99d5a61f142f0b89d7563b262cfa0 196 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 1 193 39.609 T 25-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 SMA_RS08110 abc99d5a61f142f0b89d7563b262cfa0 196 PANTHER PTHR10381:SF22 1 194 2.5E-110 T 25-04-2016 SMA_RS08110 abc99d5a61f142f0b89d7563b262cfa0 196 PRINTS PR00127 Clp protease catalytic subunit P signature 17 32 5.3E-44 T 25-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 SMA_RS08110 abc99d5a61f142f0b89d7563b262cfa0 196 PRINTS PR00127 Clp protease catalytic subunit P signature 168 187 5.3E-44 T 25-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 SMA_RS08110 abc99d5a61f142f0b89d7563b262cfa0 196 PRINTS PR00127 Clp protease catalytic subunit P signature 88 105 5.3E-44 T 25-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 SMA_RS08110 abc99d5a61f142f0b89d7563b262cfa0 196 PRINTS PR00127 Clp protease catalytic subunit P signature 109 128 5.3E-44 T 25-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 SMA_RS08110 abc99d5a61f142f0b89d7563b262cfa0 196 PRINTS PR00127 Clp protease catalytic subunit P signature 57 77 5.3E-44 T 25-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 SMA_RS08110 abc99d5a61f142f0b89d7563b262cfa0 196 Pfam PF00574 Clp protease 10 192 2.5E-79 T 25-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA SMA_RS08110 abc99d5a61f142f0b89d7563b262cfa0 196 SUPERFAMILY SSF52096 8 190 9.62E-67 T 25-04-2016 IPR029045 ClpP/crotonase-like domain SMA_RS08110 abc99d5a61f142f0b89d7563b262cfa0 196 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 88 99 - T 25-04-2016 IPR018215 ClpP, Ser active site SMA_RS04790 2225c2ae1ce62d873ee64a14b88128f0 144 Gene3D G3DSA:1.10.10.10 13 139 2.1E-21 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMA_RS04790 2225c2ae1ce62d873ee64a14b88128f0 144 SMART SM00347 25 125 2.1E-9 T 25-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SMA_RS04790 2225c2ae1ce62d873ee64a14b88128f0 144 SUPERFAMILY SSF46785 10 139 1.39E-19 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMA_RS04790 2225c2ae1ce62d873ee64a14b88128f0 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 115 135 1.7E-7 T 25-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SMA_RS04790 2225c2ae1ce62d873ee64a14b88128f0 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 66 81 1.7E-7 T 25-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SMA_RS04790 2225c2ae1ce62d873ee64a14b88128f0 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 85 101 1.7E-7 T 25-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SMA_RS00365 9907b33d9aa072a67d46201ea07914fd 114 ProSitePatterns PS00464 Ribosomal protein L22 signature. 87 111 - T 25-04-2016 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS00365 9907b33d9aa072a67d46201ea07914fd 114 Gene3D G3DSA:3.90.470.10 6 114 3.9E-45 T 25-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 SMA_RS00365 9907b33d9aa072a67d46201ea07914fd 114 PANTHER PTHR13501 1 113 5.1E-51 T 25-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 SMA_RS00365 9907b33d9aa072a67d46201ea07914fd 114 Pfam PF00237 Ribosomal protein L22p/L17e 12 111 1.1E-35 T 25-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 SMA_RS00365 9907b33d9aa072a67d46201ea07914fd 114 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 5 114 30.089 T 25-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 SMA_RS00365 9907b33d9aa072a67d46201ea07914fd 114 SUPERFAMILY SSF54843 6 114 5.36E-45 T 25-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 SMA_RS00365 9907b33d9aa072a67d46201ea07914fd 114 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 9 111 2.2E-46 T 25-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 SMA_RS00965 673788c757d69193a576f05091d2009f 281 PANTHER PTHR14226 3 279 8.1E-64 T 25-04-2016 SMA_RS00965 673788c757d69193a576f05091d2009f 281 Pfam PF01734 Patatin-like phospholipase 5 170 3.3E-16 T 25-04-2016 IPR002641 Patatin/Phospholipase A2-related GO:0006629 SMA_RS00965 673788c757d69193a576f05091d2009f 281 SUPERFAMILY SSF52151 2 270 1.52E-42 T 25-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 SMA_RS00965 673788c757d69193a576f05091d2009f 281 PANTHER PTHR14226:SF25 3 279 8.1E-64 T 25-04-2016 SMA_RS03845 d6e6804549befa0fe9b4bfdc4c86f935 295 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 8 275 3.1E-75 T 25-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 SMA_RS03845 d6e6804549befa0fe9b4bfdc4c86f935 295 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 7 295 27.993 T 25-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 SMA_RS03845 d6e6804549befa0fe9b4bfdc4c86f935 295 Gene3D G3DSA:1.10.287.890 190 269 2.7E-30 T 25-04-2016 SMA_RS03845 d6e6804549befa0fe9b4bfdc4c86f935 295 Pfam PF01715 IPP transferase 40 271 7.6E-71 T 25-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 SMA_RS03845 d6e6804549befa0fe9b4bfdc4c86f935 295 Gene3D G3DSA:3.40.50.300 3 166 2.5E-50 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS03845 d6e6804549befa0fe9b4bfdc4c86f935 295 SUPERFAMILY SSF52540 6 52 8.39E-6 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS03845 d6e6804549befa0fe9b4bfdc4c86f935 295 SUPERFAMILY SSF52540 173 251 8.39E-6 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS03845 d6e6804549befa0fe9b4bfdc4c86f935 295 PANTHER PTHR11088 3 270 1.7E-100 T 25-04-2016 SMA_RS03845 d6e6804549befa0fe9b4bfdc4c86f935 295 SUPERFAMILY SSF52540 7 138 6.25E-20 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS04915 091db1fb88b5f11a23af66343dba1ccf 677 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 216 222 - T 25-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 SMA_RS04915 091db1fb88b5f11a23af66343dba1ccf 677 Pfam PF01555 DNA methylase 213 540 6.6E-44 T 25-04-2016 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 SMA_RS04915 091db1fb88b5f11a23af66343dba1ccf 677 PIRSF PIRSF015855 55 674 9.5E-100 T 25-04-2016 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 SMA_RS04915 091db1fb88b5f11a23af66343dba1ccf 677 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 247 266 5.8E-17 T 25-04-2016 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 SMA_RS04915 091db1fb88b5f11a23af66343dba1ccf 677 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 508 522 5.8E-17 T 25-04-2016 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 SMA_RS04915 091db1fb88b5f11a23af66343dba1ccf 677 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 213 225 5.8E-17 T 25-04-2016 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 SMA_RS04915 091db1fb88b5f11a23af66343dba1ccf 677 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 485 507 5.8E-17 T 25-04-2016 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 SMA_RS04915 091db1fb88b5f11a23af66343dba1ccf 677 SUPERFAMILY SSF53335 189 347 9.5E-54 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMA_RS04915 091db1fb88b5f11a23af66343dba1ccf 677 SUPERFAMILY SSF53335 464 554 9.5E-54 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMA_RS04915 091db1fb88b5f11a23af66343dba1ccf 677 PANTHER PTHR13370 178 392 4.4E-47 T 25-04-2016 SMA_RS04915 091db1fb88b5f11a23af66343dba1ccf 677 PANTHER PTHR13370 117 154 4.4E-47 T 25-04-2016 SMA_RS04915 091db1fb88b5f11a23af66343dba1ccf 677 PANTHER PTHR13370 461 602 4.4E-47 T 25-04-2016 SMA_RS04915 091db1fb88b5f11a23af66343dba1ccf 677 PANTHER PTHR13370:SF7 178 392 4.4E-47 T 25-04-2016 SMA_RS04915 091db1fb88b5f11a23af66343dba1ccf 677 PANTHER PTHR13370:SF7 117 154 4.4E-47 T 25-04-2016 SMA_RS04915 091db1fb88b5f11a23af66343dba1ccf 677 PANTHER PTHR13370:SF7 461 602 4.4E-47 T 25-04-2016 SMA_RS04915 091db1fb88b5f11a23af66343dba1ccf 677 Gene3D G3DSA:3.40.50.150 461 574 2.4E-59 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMA_RS04915 091db1fb88b5f11a23af66343dba1ccf 677 Gene3D G3DSA:3.40.50.150 186 331 2.4E-59 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMA_RS04915 091db1fb88b5f11a23af66343dba1ccf 677 Pfam PF12564 Type III restriction/modification enzyme methylation subunit 42 97 5.2E-19 T 25-04-2016 IPR022221 Type III restriction/modification enzyme methylation subunit SMA_RS03680 5f12725393a25db067e4d2bc8266b1a5 396 SUPERFAMILY SSF55973 245 395 2.35E-67 T 25-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 SMA_RS03680 5f12725393a25db067e4d2bc8266b1a5 396 Gene3D G3DSA:3.30.300.10 256 395 4.3E-68 T 25-04-2016 SMA_RS03680 5f12725393a25db067e4d2bc8266b1a5 396 PIRSF PIRSF000497 1 396 4.2E-175 T 25-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 SMA_RS03680 5f12725393a25db067e4d2bc8266b1a5 396 Gene3D G3DSA:3.30.300.10 144 245 1.8E-49 T 25-04-2016 SMA_RS03680 5f12725393a25db067e4d2bc8266b1a5 396 PANTHER PTHR11964 1 390 2.2E-264 T 25-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 SMA_RS03680 5f12725393a25db067e4d2bc8266b1a5 396 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 3 395 56.728 T 25-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 SMA_RS03680 5f12725393a25db067e4d2bc8266b1a5 396 SUPERFAMILY SSF55973 5 110 9.81E-43 T 25-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 SMA_RS03680 5f12725393a25db067e4d2bc8266b1a5 396 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 6 394 8.7E-178 T 25-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 SMA_RS03680 5f12725393a25db067e4d2bc8266b1a5 396 SUPERFAMILY SSF55973 124 244 9.03E-53 T 25-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 SMA_RS03680 5f12725393a25db067e4d2bc8266b1a5 396 Pfam PF02772 S-adenosylmethionine synthetase, central domain 126 243 1.7E-49 T 25-04-2016 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 SMA_RS03680 5f12725393a25db067e4d2bc8266b1a5 396 Gene3D G3DSA:3.30.300.10 12 143 3.1E-43 T 25-04-2016 SMA_RS03680 5f12725393a25db067e4d2bc8266b1a5 396 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 271 279 - T 25-04-2016 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 SMA_RS03680 5f12725393a25db067e4d2bc8266b1a5 396 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 127 137 - T 25-04-2016 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 SMA_RS03680 5f12725393a25db067e4d2bc8266b1a5 396 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 245 384 1.7E-67 T 25-04-2016 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 SMA_RS03680 5f12725393a25db067e4d2bc8266b1a5 396 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 5 102 4.7E-39 T 25-04-2016 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 SMA_RS04085 9b8d813aabb84b890c47aae5aaeb7343 326 Gene3D G3DSA:3.40.50.970 4 326 2.4E-126 T 25-04-2016 IPR029061 Thiamin diphosphate-binding fold SMA_RS04085 9b8d813aabb84b890c47aae5aaeb7343 326 SUPERFAMILY SSF52518 4 326 1.84E-102 T 25-04-2016 IPR029061 Thiamin diphosphate-binding fold SMA_RS04085 9b8d813aabb84b890c47aae5aaeb7343 326 Pfam PF00676 Dehydrogenase E1 component 19 315 1.7E-84 T 25-04-2016 IPR001017 Dehydrogenase, E1 component GO:0008152|GO:0016624 SMA_RS04085 9b8d813aabb84b890c47aae5aaeb7343 326 PANTHER PTHR11516 8 326 1.3E-133 T 25-04-2016 SMA_RS08085 fcfb047f979965d5da51ad08ec8f8f59 317 PANTHER PTHR30482:SF10 1 311 8.1E-95 T 25-04-2016 SMA_RS08085 fcfb047f979965d5da51ad08ec8f8f59 317 PANTHER PTHR30482 1 311 8.1E-95 T 25-04-2016 SMA_RS08085 fcfb047f979965d5da51ad08ec8f8f59 317 Pfam PF02653 Branched-chain amino acid transport system / permease component 36 290 1.4E-41 T 25-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 SMA_RS08300 9f00d64b1746bbe2207abd3a76000ae9 188 Hamap MF_01804 Segregation and condensation protein B [scpB]. 1 179 32.489 T 25-04-2016 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 SMA_RS08300 9f00d64b1746bbe2207abd3a76000ae9 188 PANTHER PTHR34298 1 176 6.4E-48 T 25-04-2016 SMA_RS08300 9f00d64b1746bbe2207abd3a76000ae9 188 Pfam PF04079 Segregation and condensation complex subunit ScpB 5 163 6.0E-52 T 25-04-2016 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 SMA_RS08300 9f00d64b1746bbe2207abd3a76000ae9 188 Gene3D G3DSA:1.10.10.10 4 79 6.8E-16 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMA_RS08300 9f00d64b1746bbe2207abd3a76000ae9 188 SUPERFAMILY SSF46785 2 79 8.24E-14 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMA_RS08300 9f00d64b1746bbe2207abd3a76000ae9 188 PIRSF PIRSF019345 1 185 3.9E-49 T 25-04-2016 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 SMA_RS08300 9f00d64b1746bbe2207abd3a76000ae9 188 Gene3D G3DSA:1.10.10.10 84 157 2.1E-32 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMA_RS08300 9f00d64b1746bbe2207abd3a76000ae9 188 SUPERFAMILY SSF46785 83 157 4.63E-24 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMA_RS08300 9f00d64b1746bbe2207abd3a76000ae9 188 TIGRFAM TIGR00281 TIGR00281: segregation and condensation protein B 2 173 2.5E-42 T 25-04-2016 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 SMA_RS07245 1182a75718ea053b1e55cd01d7c52f23 403 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 343 367 - T 25-04-2016 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0007049|GO:0016021 SMA_RS07245 1182a75718ea053b1e55cd01d7c52f23 403 PANTHER PTHR30474 1 402 5.5E-135 T 25-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 SMA_RS07245 1182a75718ea053b1e55cd01d7c52f23 403 PANTHER PTHR30474:SF1 1 402 5.5E-135 T 25-04-2016 IPR011923 Rod shape-determining protein RodA GO:0008360|GO:0016021 SMA_RS07245 1182a75718ea053b1e55cd01d7c52f23 403 Pfam PF01098 Cell cycle protein 20 385 6.1E-76 T 25-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 SMA_RS03165 9bfae9afbf3ed5f400399d99ca959f42 156 Pfam PF02863 Arginine repressor, C-terminal domain 94 148 6.1E-8 T 25-04-2016 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 UniPathway: UPA00068 SMA_RS03165 9bfae9afbf3ed5f400399d99ca959f42 156 Pfam PF01316 Arginine repressor, DNA binding domain 1 68 4.4E-22 T 25-04-2016 IPR020900 Arginine repressor, DNA-binding domain GO:0003700|GO:0006355|GO:0006525 UniPathway: UPA00068 SMA_RS03165 9bfae9afbf3ed5f400399d99ca959f42 156 PANTHER PTHR34471:SF1 1 156 3.1E-39 T 25-04-2016 SMA_RS03165 9bfae9afbf3ed5f400399d99ca959f42 156 PANTHER PTHR34471 1 156 3.1E-39 T 25-04-2016 SMA_RS03165 9bfae9afbf3ed5f400399d99ca959f42 156 SUPERFAMILY SSF46785 1 67 6.46E-19 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMA_RS03165 9bfae9afbf3ed5f400399d99ca959f42 156 Gene3D G3DSA:1.10.10.10 9 66 4.7E-22 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMA_RS03165 9bfae9afbf3ed5f400399d99ca959f42 156 Gene3D G3DSA:3.30.1360.40 93 152 2.0E-10 T 25-04-2016 IPR024946 Arginine repressor C-terminal-like domain SMA_RS03165 9bfae9afbf3ed5f400399d99ca959f42 156 SUPERFAMILY SSF55252 92 152 1.02E-12 T 25-04-2016 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 UniPathway: UPA00068 SMA_RS03165 9bfae9afbf3ed5f400399d99ca959f42 156 Hamap MF_00173 Arginine repressor [argR]. 1 155 45.775 T 25-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 SMA_RS03165 9bfae9afbf3ed5f400399d99ca959f42 156 PRINTS PR01467 Bacterial arginine repressor signature 121 136 1.4E-13 T 25-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 SMA_RS03165 9bfae9afbf3ed5f400399d99ca959f42 156 PRINTS PR01467 Bacterial arginine repressor signature 91 104 1.4E-13 T 25-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 SMA_RS03165 9bfae9afbf3ed5f400399d99ca959f42 156 PRINTS PR01467 Bacterial arginine repressor signature 37 52 1.4E-13 T 25-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 SMA_RS03165 9bfae9afbf3ed5f400399d99ca959f42 156 PRINTS PR01467 Bacterial arginine repressor signature 21 34 1.4E-13 T 25-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 SMA_RS05380 ef7e384d24c619f29904ab77df9172eb 91 SUPERFAMILY SSF158504 5 88 4.71E-32 T 25-04-2016 IPR023324 BH2638-like domain SMA_RS05380 ef7e384d24c619f29904ab77df9172eb 91 Pfam PF05256 Uncharacterised protein family (UPF0223) 3 86 7.6E-35 T 25-04-2016 IPR007920 Protein of unknown function UPF0223 SMA_RS05380 ef7e384d24c619f29904ab77df9172eb 91 Hamap MF_01041 UPF0223 protein . 2 89 24.746 T 25-04-2016 IPR007920 Protein of unknown function UPF0223 SMA_RS05380 ef7e384d24c619f29904ab77df9172eb 91 PANTHER PTHR41305 3 91 3.2E-31 T 25-04-2016 SMA_RS05380 ef7e384d24c619f29904ab77df9172eb 91 PIRSF PIRSF037260 1 91 1.5E-38 T 25-04-2016 IPR007920 Protein of unknown function UPF0223 SMA_RS05380 ef7e384d24c619f29904ab77df9172eb 91 ProDom PD062738 UPF0223 FAMILY UNCHARACTERISED CYTOSOLIC SUPERFAMILY YKTA LMO1058/LIN1050 INOSITOL MW0980 M6_SPY0948 3 74 7.0E-27 T 25-04-2016 IPR007920 Protein of unknown function UPF0223 SMA_RS05380 ef7e384d24c619f29904ab77df9172eb 91 Gene3D G3DSA:1.10.220.80 13 90 2.2E-32 T 25-04-2016 IPR023324 BH2638-like domain SMA_RS09280 58154cc5b442807c1fc7be6052c90024 284 SUPERFAMILY SSF53098 120 282 3.16E-40 T 25-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMA_RS09280 58154cc5b442807c1fc7be6052c90024 284 Pfam PF13276 HTH-like domain 51 101 6.2E-11 T 25-04-2016 IPR025948 HTH-like domain SMA_RS09280 58154cc5b442807c1fc7be6052c90024 284 Gene3D G3DSA:3.30.420.10 120 276 7.8E-38 T 25-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMA_RS09280 58154cc5b442807c1fc7be6052c90024 284 PANTHER PTHR32552 15 280 3.7E-62 T 25-04-2016 SMA_RS09280 58154cc5b442807c1fc7be6052c90024 284 Pfam PF00665 Integrase core domain 123 238 5.3E-32 T 25-04-2016 IPR001584 Integrase, catalytic core GO:0015074 SMA_RS04510 e4ddca89f9894e63348b07aaa40d7a59 803 Gene3D G3DSA:3.90.199.10 26 231 1.6E-115 T 25-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 SMA_RS04510 e4ddca89f9894e63348b07aaa40d7a59 803 Gene3D G3DSA:3.90.199.10 329 394 1.6E-115 T 25-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 SMA_RS04510 e4ddca89f9894e63348b07aaa40d7a59 803 PANTHER PTHR10169:SF47 4 802 0.0 T 25-04-2016 SMA_RS04510 e4ddca89f9894e63348b07aaa40d7a59 803 PANTHER PTHR10169 4 802 0.0 T 25-04-2016 SMA_RS04510 e4ddca89f9894e63348b07aaa40d7a59 803 Gene3D G3DSA:3.30.1360.40 232 328 2.1E-34 T 25-04-2016 IPR024946 Arginine repressor C-terminal-like domain SMA_RS04510 e4ddca89f9894e63348b07aaa40d7a59 803 Gene3D G3DSA:2.120.10.90 496 800 2.0E-66 T 25-04-2016 SMA_RS04510 e4ddca89f9894e63348b07aaa40d7a59 803 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 502 521 3.4 T 25-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 SMA_RS04510 e4ddca89f9894e63348b07aaa40d7a59 803 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 702 737 0.0061 T 25-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 SMA_RS04510 e4ddca89f9894e63348b07aaa40d7a59 803 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 653 700 1.3E-13 T 25-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 SMA_RS04510 e4ddca89f9894e63348b07aaa40d7a59 803 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 546 596 0.0038 T 25-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 SMA_RS04510 e4ddca89f9894e63348b07aaa40d7a59 803 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 605 650 0.24 T 25-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 SMA_RS04510 e4ddca89f9894e63348b07aaa40d7a59 803 SUPERFAMILY SSF56719 27 482 7.72E-167 T 25-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 SMA_RS04510 e4ddca89f9894e63348b07aaa40d7a59 803 TIGRFAM TIGR01061 parC_Gpos: DNA topoisomerase IV, A subunit 5 742 0.0 T 25-04-2016 IPR005741 DNA topoisomerase IV subunit A, Gram-positive GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 SMA_RS04510 e4ddca89f9894e63348b07aaa40d7a59 803 SUPERFAMILY SSF101904 496 800 3.27E-71 T 25-04-2016 SMA_RS04510 e4ddca89f9894e63348b07aaa40d7a59 803 SMART SM00434 7 460 2.4E-258 T 25-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 SMA_RS04510 e4ddca89f9894e63348b07aaa40d7a59 803 Hamap MF_00937 DNA topoisomerase 4 subunit A [parC]. 3 803 33.406 T 25-04-2016 IPR005741 DNA topoisomerase IV subunit A, Gram-positive GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 SMA_RS04510 e4ddca89f9894e63348b07aaa40d7a59 803 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 28 467 4.2E-149 T 25-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 SMA_RS01195 aca24b2ac71fd96487b015b481d6ec51 171 Hamap MF_01556 Galactose-6-phosphate isomerase subunit LacB [lacB]. 1 171 47.667 T 25-04-2016 IPR004784 Galactose-6-phosphate isomerase subunit LacB GO:0005990|GO:0016861|GO:0050044 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 SMA_RS01195 aca24b2ac71fd96487b015b481d6ec51 171 Gene3D G3DSA:3.40.1400.10 1 154 1.2E-51 T 25-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 SMA_RS01195 aca24b2ac71fd96487b015b481d6ec51 171 PANTHER PTHR30345 1 171 1.5E-127 T 25-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 SMA_RS01195 aca24b2ac71fd96487b015b481d6ec51 171 TIGRFAM TIGR01119 lacB: galactose-6-phosphate isomerase, LacB subunit 1 171 1.9E-101 T 25-04-2016 IPR004784 Galactose-6-phosphate isomerase subunit LacB GO:0005990|GO:0016861|GO:0050044 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 SMA_RS01195 aca24b2ac71fd96487b015b481d6ec51 171 SUPERFAMILY SSF89623 1 151 4.45E-48 T 25-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 SMA_RS01195 aca24b2ac71fd96487b015b481d6ec51 171 PANTHER PTHR30345:SF4 1 171 1.5E-127 T 25-04-2016 SMA_RS01195 aca24b2ac71fd96487b015b481d6ec51 171 TIGRFAM TIGR00689 rpiB_lacA_lacB: sugar-phosphate isomerase, RpiB/LacA/LacB family 3 145 2.2E-35 T 25-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 SMA_RS01195 aca24b2ac71fd96487b015b481d6ec51 171 PIRSF PIRSF005384 1 148 9.1E-48 T 25-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 SMA_RS01195 aca24b2ac71fd96487b015b481d6ec51 171 Pfam PF02502 Ribose/Galactose Isomerase 3 141 1.8E-40 T 25-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 SMA_RS06435 06d01079a0b2af4b0249b3839169ca88 432 Pfam PF09913 Predicted membrane protein (DUF2142) 15 387 5.7E-55 T 25-04-2016 IPR018674 Protein of unknown function DUF2142, membrane SMA_RS10360 b7aeda65d6a65e8ed31c6d4f868f9b9a 373 Gene3D G3DSA:2.40.30.10 283 371 3.0E-32 T 25-04-2016 SMA_RS10360 b7aeda65d6a65e8ed31c6d4f868f9b9a 373 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 7 361 41.384 T 25-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 SMA_RS10360 b7aeda65d6a65e8ed31c6d4f868f9b9a 373 Gene3D G3DSA:3.40.50.620 4 212 1.1E-104 T 25-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SMA_RS10360 b7aeda65d6a65e8ed31c6d4f868f9b9a 373 Pfam PF03054 tRNA methyl transferase 8 360 6.5E-147 T 25-04-2016 SMA_RS10360 b7aeda65d6a65e8ed31c6d4f868f9b9a 373 SUPERFAMILY SSF52402 8 244 2.12E-58 T 25-04-2016 SMA_RS10360 b7aeda65d6a65e8ed31c6d4f868f9b9a 373 Gene3D G3DSA:2.30.30.280 214 281 1.0E-31 T 25-04-2016 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 SMA_RS10360 b7aeda65d6a65e8ed31c6d4f868f9b9a 373 PANTHER PTHR11933 1 366 2.1E-210 T 25-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 SMA_RS10360 b7aeda65d6a65e8ed31c6d4f868f9b9a 373 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 8 360 3.2E-137 T 25-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 SMA_RS10360 b7aeda65d6a65e8ed31c6d4f868f9b9a 373 PANTHER PTHR11933:SF10 1 366 2.1E-210 T 25-04-2016 SMA_RS08980 3e5d91612caf9cc8ed27ebe0551a9ac1 197 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 11 190 3.8E-43 T 25-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 SMA_RS08980 3e5d91612caf9cc8ed27ebe0551a9ac1 197 PANTHER PTHR12383:SF21 7 190 1.4E-49 T 25-04-2016 SMA_RS08980 3e5d91612caf9cc8ed27ebe0551a9ac1 197 Pfam PF00717 Peptidase S24-like 30 96 5.8E-18 T 25-04-2016 IPR019759 Peptidase S24/S26A/S26B SMA_RS08980 3e5d91612caf9cc8ed27ebe0551a9ac1 197 ProSitePatterns PS00760 Signal peptidases I lysine active site. 75 87 - T 25-04-2016 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 SMA_RS08980 3e5d91612caf9cc8ed27ebe0551a9ac1 197 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 24 40 5.2E-20 T 25-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 SMA_RS08980 3e5d91612caf9cc8ed27ebe0551a9ac1 197 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 73 85 5.2E-20 T 25-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 SMA_RS08980 3e5d91612caf9cc8ed27ebe0551a9ac1 197 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 150 169 5.2E-20 T 25-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 SMA_RS08980 3e5d91612caf9cc8ed27ebe0551a9ac1 197 Gene3D G3DSA:2.10.109.10 150 196 2.4E-30 T 25-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain SMA_RS08980 3e5d91612caf9cc8ed27ebe0551a9ac1 197 Gene3D G3DSA:2.10.109.10 22 83 2.4E-30 T 25-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain SMA_RS08980 3e5d91612caf9cc8ed27ebe0551a9ac1 197 SUPERFAMILY SSF51306 22 196 8.76E-50 T 25-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C SMA_RS08980 3e5d91612caf9cc8ed27ebe0551a9ac1 197 PANTHER PTHR12383 7 190 1.4E-49 T 25-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 SMA_RS08980 3e5d91612caf9cc8ed27ebe0551a9ac1 197 ProSitePatterns PS00501 Signal peptidases I serine active site. 33 40 - T 25-04-2016 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: REACT_15380 SMA_RS07175 390cc27824533e437f5b3e9bd5a56bde 106 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 52 105 4.0E-22 T 25-04-2016 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19|UniPathway: UPA00031 SMA_RS07175 390cc27824533e437f5b3e9bd5a56bde 106 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 29 102 2.3E-35 T 25-04-2016 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19|UniPathway: UPA00031 SMA_RS07175 390cc27824533e437f5b3e9bd5a56bde 106 SUPERFAMILY SSF141734 5 105 1.31E-48 T 25-04-2016 SMA_RS07175 390cc27824533e437f5b3e9bd5a56bde 106 Hamap MF_01021 Phosphoribosyl-AMP cyclohydrolase [hisI]. 3 106 30.849 T 25-04-2016 IPR026660 Phosphoribosyl-AMP cyclohydrolase GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19|UniPathway: UPA00031 SMA_RS07175 390cc27824533e437f5b3e9bd5a56bde 106 PANTHER PTHR21256 4 105 3.4E-58 T 25-04-2016 SMA_RS06475 f6cf58ddc9a9f597929101f7b35a41d9 268 PANTHER PTHR30413 11 268 3.7E-47 T 25-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 SMA_RS06475 f6cf58ddc9a9f597929101f7b35a41d9 268 PANTHER PTHR30413:SF8 11 268 3.7E-47 T 25-04-2016 SMA_RS06475 f6cf58ddc9a9f597929101f7b35a41d9 268 Pfam PF01061 ABC-2 type transporter 12 219 1.3E-17 T 25-04-2016 IPR013525 ABC-2 type transporter GO:0016020 SMA_RS04255 c382c61532c440c3b87b2abd784b9e8e 599 SUPERFAMILY SSF82771 15 97 8.24E-22 T 25-04-2016 IPR000305 GIY-YIG nuclease superfamily SMA_RS04255 c382c61532c440c3b87b2abd784b9e8e 599 Hamap MF_00203 UvrABC system protein C [uvrC]. 2 588 27.285 T 25-04-2016 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 SMA_RS04255 c382c61532c440c3b87b2abd784b9e8e 599 Gene3D G3DSA:4.10.860.10 179 236 8.9E-15 T 25-04-2016 IPR001943 UVR domain GO:0005515 SMA_RS04255 c382c61532c440c3b87b2abd784b9e8e 599 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 373 524 2.7E-50 T 25-04-2016 IPR001162 UvrC family homology region SMA_RS04255 c382c61532c440c3b87b2abd784b9e8e 599 Pfam PF01541 GIY-YIG catalytic domain 17 90 8.6E-10 T 25-04-2016 IPR000305 GIY-YIG nuclease superfamily SMA_RS04255 c382c61532c440c3b87b2abd784b9e8e 599 Pfam PF02151 UvrB/uvrC motif 198 230 6.5E-9 T 25-04-2016 IPR001943 UVR domain GO:0005515 SMA_RS04255 c382c61532c440c3b87b2abd784b9e8e 599 PANTHER PTHR30562 2 589 5.3E-263 T 25-04-2016 SMA_RS04255 c382c61532c440c3b87b2abd784b9e8e 599 SUPERFAMILY SSF46600 183 236 3.01E-12 T 25-04-2016 IPR001943 UVR domain GO:0005515 SMA_RS04255 c382c61532c440c3b87b2abd784b9e8e 599 Gene3D G3DSA:3.40.1440.10 16 91 1.8E-8 T 25-04-2016 IPR027299 GIY-YIG domain SMA_RS04255 c382c61532c440c3b87b2abd784b9e8e 599 SMART SM00465 15 95 8.3E-21 T 25-04-2016 IPR000305 GIY-YIG nuclease superfamily SMA_RS04255 c382c61532c440c3b87b2abd784b9e8e 599 PANTHER PTHR30562:SF1 2 589 5.3E-263 T 25-04-2016 SMA_RS04255 c382c61532c440c3b87b2abd784b9e8e 599 Gene3D G3DSA:1.10.150.20 538 590 9.1E-18 T 25-04-2016 SMA_RS04255 c382c61532c440c3b87b2abd784b9e8e 599 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 6 570 1.2E-190 T 25-04-2016 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 SMA_RS04255 c382c61532c440c3b87b2abd784b9e8e 599 SUPERFAMILY SSF47781 503 593 2.32E-20 T 25-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 SMA_RS10100 ef6fe5001d69d98ec9a302794c0a4152 200 SUPERFAMILY SSF46689 10 71 6.62E-15 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMA_RS10100 ef6fe5001d69d98ec9a302794c0a4152 200 Gene3D G3DSA:1.10.357.10 13 180 1.7E-17 T 25-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 SMA_RS10100 ef6fe5001d69d98ec9a302794c0a4152 200 Pfam PF00440 Bacterial regulatory proteins, tetR family 27 63 6.5E-9 T 25-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SMA_RS05610 077ba46c5927561a77d3c5f3cae29518 187 SUPERFAMILY SSF55620 4 184 7.26E-77 T 25-04-2016 SMA_RS05610 077ba46c5927561a77d3c5f3cae29518 187 PANTHER PTHR11109 2 184 9.0E-109 T 25-04-2016 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 SMA_RS05610 077ba46c5927561a77d3c5f3cae29518 187 Pfam PF01227 GTP cyclohydrolase I 8 184 8.2E-79 T 25-04-2016 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 SMA_RS05610 077ba46c5927561a77d3c5f3cae29518 187 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 3 185 42.025 T 25-04-2016 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 SMA_RS05610 077ba46c5927561a77d3c5f3cae29518 187 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 8 184 7.9E-76 T 25-04-2016 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 SMA_RS05610 077ba46c5927561a77d3c5f3cae29518 187 Gene3D G3DSA:3.30.1130.10 56 184 6.5E-61 T 25-04-2016 SMA_RS05610 077ba46c5927561a77d3c5f3cae29518 187 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 63 79 - T 25-04-2016 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 SMA_RS05610 077ba46c5927561a77d3c5f3cae29518 187 Gene3D G3DSA:1.10.286.10 3 51 4.0E-25 T 25-04-2016 SMA_RS05610 077ba46c5927561a77d3c5f3cae29518 187 ProSitePatterns PS00860 GTP cyclohydrolase I signature 2. 112 122 - T 25-04-2016 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 SMA_RS00290 bb827d5fa39dd801c3d61f97935c5354 126 PIRSF PIRSF034300 1 126 4.7E-55 T 25-04-2016 IPR014590 Uncharacterised conserved protein MORN repeat-containing SMA_RS00290 bb827d5fa39dd801c3d61f97935c5354 126 SUPERFAMILY SSF82185 41 122 1.31E-23 T 25-04-2016 SMA_RS00290 bb827d5fa39dd801c3d61f97935c5354 126 Gene3D G3DSA:2.20.110.10 34 123 5.0E-26 T 25-04-2016 SMA_RS00290 bb827d5fa39dd801c3d61f97935c5354 126 SMART SM00698 44 65 12.0 T 25-04-2016 IPR003409 MORN motif SMA_RS00290 bb827d5fa39dd801c3d61f97935c5354 126 SMART SM00698 67 88 0.0081 T 25-04-2016 IPR003409 MORN motif SMA_RS00290 bb827d5fa39dd801c3d61f97935c5354 126 SMART SM00698 90 111 0.036 T 25-04-2016 IPR003409 MORN motif SMA_RS00290 bb827d5fa39dd801c3d61f97935c5354 126 PANTHER PTHR23084 36 125 8.0E-25 T 25-04-2016 SMA_RS00290 bb827d5fa39dd801c3d61f97935c5354 126 Pfam PF02493 MORN repeat 92 113 8.9E-7 T 25-04-2016 IPR003409 MORN motif SMA_RS00290 bb827d5fa39dd801c3d61f97935c5354 126 Pfam PF02493 MORN repeat 69 90 5.8E-5 T 25-04-2016 IPR003409 MORN motif SMA_RS00290 bb827d5fa39dd801c3d61f97935c5354 126 Pfam PF02493 MORN repeat 46 68 1.6E-4 T 25-04-2016 IPR003409 MORN motif SMA_RS00900 98618071fc33d30789599e0d7e795341 301 Gene3D G3DSA:1.10.260.40 5 68 3.9E-6 T 25-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SMA_RS00900 98618071fc33d30789599e0d7e795341 301 TIGRFAM TIGR01716 RGG_Cterm: transcriptional activator, Rgg/GadR/MutR family, C-terminal domain 70 287 6.2E-59 T 25-04-2016 IPR010057 Transcription activator MutR, C-terminal SMA_RS00900 98618071fc33d30789599e0d7e795341 301 SMART SM00530 14 68 0.0017 T 25-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SMA_RS00900 98618071fc33d30789599e0d7e795341 301 PANTHER PTHR37038 9 296 1.8E-59 T 25-04-2016 SMA_RS00900 98618071fc33d30789599e0d7e795341 301 PANTHER PTHR37038:SF1 9 296 1.8E-59 T 25-04-2016 SMA_RS00900 98618071fc33d30789599e0d7e795341 301 SUPERFAMILY SSF47413 9 68 1.75E-8 T 25-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SMA_RS07800 27d52f6206be24e1f08b6f839a27a2d4 199 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 8 192 6.6E-53 T 25-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 SMA_RS07800 27d52f6206be24e1f08b6f839a27a2d4 199 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 6 198 24.115 T 25-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 SMA_RS07800 27d52f6206be24e1f08b6f839a27a2d4 199 Gene3D G3DSA:3.40.50.300 3 197 1.4E-65 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS07800 27d52f6206be24e1f08b6f839a27a2d4 199 Pfam PF01121 Dephospho-CoA kinase 8 186 2.5E-50 T 25-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 SMA_RS07800 27d52f6206be24e1f08b6f839a27a2d4 199 SUPERFAMILY SSF52540 5 197 5.89E-35 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS07800 27d52f6206be24e1f08b6f839a27a2d4 199 PANTHER PTHR10695 2 197 2.9E-59 T 25-04-2016 SMA_RS09825 6b792412542b7494e052da443c5c1f7b 388 Gene3D G3DSA:1.20.1250.20 190 382 3.7E-20 T 25-04-2016 SMA_RS09825 6b792412542b7494e052da443c5c1f7b 388 PANTHER PTHR23523 6 387 5.7E-116 T 25-04-2016 SMA_RS09825 6b792412542b7494e052da443c5c1f7b 388 PANTHER PTHR23523:SF2 6 387 5.7E-116 T 25-04-2016 SMA_RS09825 6b792412542b7494e052da443c5c1f7b 388 SUPERFAMILY SSF103473 12 382 2.09E-41 T 25-04-2016 IPR020846 Major facilitator superfamily domain SMA_RS09825 6b792412542b7494e052da443c5c1f7b 388 Pfam PF07690 Major Facilitator Superfamily 14 317 1.6E-21 T 25-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SMA_RS09825 6b792412542b7494e052da443c5c1f7b 388 Gene3D G3DSA:1.20.1250.20 7 179 9.2E-15 T 25-04-2016 SMA_RS05840 c097bceabc983381d43daae0973990f2 427 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 55 76 1.6E-5 T 25-04-2016 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|UniPathway: UPA00058 SMA_RS05840 c097bceabc983381d43daae0973990f2 427 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 82 102 1.6E-5 T 25-04-2016 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|UniPathway: UPA00058 SMA_RS05840 c097bceabc983381d43daae0973990f2 427 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 174 192 1.6E-5 T 25-04-2016 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|UniPathway: UPA00058 SMA_RS05840 c097bceabc983381d43daae0973990f2 427 PANTHER PTHR10572 11 427 5.0E-137 T 25-04-2016 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|UniPathway: UPA00058 SMA_RS05840 c097bceabc983381d43daae0973990f2 427 SUPERFAMILY SSF55035 117 220 4.05E-32 T 25-04-2016 IPR009023 Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding domain GO:0050662 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|UniPathway: UPA00058 SMA_RS05840 c097bceabc983381d43daae0973990f2 427 SUPERFAMILY SSF56542 229 427 7.06E-99 T 25-04-2016 IPR009029 Hydroxymethylglutaryl-CoA reductase, class I/II, substrate-binding domain GO:0015936|GO:0016616|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|UniPathway: UPA00058 SMA_RS05840 c097bceabc983381d43daae0973990f2 427 SUPERFAMILY SSF56542 12 124 7.06E-99 T 25-04-2016 IPR009029 Hydroxymethylglutaryl-CoA reductase, class I/II, substrate-binding domain GO:0015936|GO:0016616|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|UniPathway: UPA00058 SMA_RS05840 c097bceabc983381d43daae0973990f2 427 Gene3D G3DSA:3.90.770.10 11 121 9.6E-89 T 25-04-2016 IPR023074 Hydroxymethylglutaryl-CoA reductase, class I/II, catalytic domain GO:0004420|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|UniPathway: UPA00058 SMA_RS05840 c097bceabc983381d43daae0973990f2 427 Gene3D G3DSA:3.90.770.10 234 375 9.6E-89 T 25-04-2016 IPR023074 Hydroxymethylglutaryl-CoA reductase, class I/II, catalytic domain GO:0004420|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|UniPathway: UPA00058 SMA_RS05840 c097bceabc983381d43daae0973990f2 427 Pfam PF00368 Hydroxymethylglutaryl-coenzyme A reductase 20 387 3.3E-109 T 25-04-2016 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|UniPathway: UPA00058 SMA_RS05840 c097bceabc983381d43daae0973990f2 427 PANTHER PTHR10572:SF6 11 427 5.0E-137 T 25-04-2016 SMA_RS05840 c097bceabc983381d43daae0973990f2 427 Gene3D G3DSA:3.30.70.420 122 220 8.2E-39 T 25-04-2016 IPR009023 Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding domain GO:0050662 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|UniPathway: UPA00058 SMA_RS05840 c097bceabc983381d43daae0973990f2 427 TIGRFAM TIGR00532 HMG_CoA_R_NAD: hydroxymethylglutaryl-CoA reductase, degradative 12 386 1.9E-94 T 25-04-2016 IPR004553 Hydroxymethylglutaryl-CoA reductase, bacterial-type GO:0015936|GO:0016616|GO:0050662 SMA_RS00790 41ffd5a9da0e0c14c8c8c41cdf245541 256 PIRSF PIRSF000193 1 256 4.1E-69 T 25-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 SMA_RS00790 41ffd5a9da0e0c14c8c8c41cdf245541 256 Gene3D G3DSA:3.40.50.720 2 147 6.5E-38 T 25-04-2016 IPR016040 NAD(P)-binding domain SMA_RS00790 41ffd5a9da0e0c14c8c8c41cdf245541 256 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 1 256 24.234 T 25-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 SMA_RS00790 41ffd5a9da0e0c14c8c8c41cdf245541 256 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 2 88 4.2E-15 T 25-04-2016 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal SMA_RS00790 41ffd5a9da0e0c14c8c8c41cdf245541 256 PANTHER PTHR11645 1 256 7.9E-81 T 25-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 SMA_RS00790 41ffd5a9da0e0c14c8c8c41cdf245541 256 PANTHER PTHR11645:SF0 1 256 7.9E-81 T 25-04-2016 SMA_RS00790 41ffd5a9da0e0c14c8c8c41cdf245541 256 SUPERFAMILY SSF48179 151 255 4.08E-29 T 25-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 SMA_RS00790 41ffd5a9da0e0c14c8c8c41cdf245541 256 Gene3D G3DSA:1.10.3730.10 151 255 4.4E-33 T 25-04-2016 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 SMA_RS00790 41ffd5a9da0e0c14c8c8c41cdf245541 256 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 3 256 6.9E-75 T 25-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 SMA_RS00790 41ffd5a9da0e0c14c8c8c41cdf245541 256 SUPERFAMILY SSF51735 1 151 1.42E-31 T 25-04-2016 IPR016040 NAD(P)-binding domain SMA_RS00790 41ffd5a9da0e0c14c8c8c41cdf245541 256 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 212 234 - T 25-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 SMA_RS00790 41ffd5a9da0e0c14c8c8c41cdf245541 256 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 152 256 7.5E-34 T 25-04-2016 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 SMA_RS00835 6e5359353d1e47f0f31f38594df29c24 321 Gene3D G3DSA:3.40.50.2300 156 315 1.5E-32 T 25-04-2016 SMA_RS00835 6e5359353d1e47f0f31f38594df29c24 321 PANTHER PTHR32196:SF9 9 312 4.6E-35 T 25-04-2016 SMA_RS00835 6e5359353d1e47f0f31f38594df29c24 321 Pfam PF13407 Periplasmic binding protein domain 42 290 2.2E-39 T 25-04-2016 IPR025997 Periplasmic binding protein SMA_RS00835 6e5359353d1e47f0f31f38594df29c24 321 PANTHER PTHR32196 9 312 4.6E-35 T 25-04-2016 SMA_RS00835 6e5359353d1e47f0f31f38594df29c24 321 SUPERFAMILY SSF53822 37 315 5.72E-58 T 25-04-2016 IPR028082 Periplasmic binding protein-like I SMA_RS00835 6e5359353d1e47f0f31f38594df29c24 321 Gene3D G3DSA:3.40.50.2300 32 155 1.2E-30 T 25-04-2016 SMA_RS02545 729926db2390d69e94fa2b3e1f9dabc4 433 Pfam PF00271 Helicase conserved C-terminal domain 287 397 9.4E-16 T 25-04-2016 IPR001650 Helicase, C-terminal SMA_RS02545 729926db2390d69e94fa2b3e1f9dabc4 433 Pfam PF00270 DEAD/DEAH box helicase 96 244 2.5E-6 T 25-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 SMA_RS02545 729926db2390d69e94fa2b3e1f9dabc4 433 SMART SM00487 91 271 2.8E-14 T 25-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain SMA_RS02545 729926db2390d69e94fa2b3e1f9dabc4 433 SUPERFAMILY SSF52540 111 410 1.31E-31 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS02545 729926db2390d69e94fa2b3e1f9dabc4 433 Gene3D G3DSA:3.40.50.300 91 252 3.0E-19 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS02545 729926db2390d69e94fa2b3e1f9dabc4 433 SMART SM00490 315 398 1.5E-12 T 25-04-2016 IPR001650 Helicase, C-terminal SMA_RS02545 729926db2390d69e94fa2b3e1f9dabc4 433 Gene3D G3DSA:3.40.50.300 288 428 1.1E-20 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS09520 eea69855e334f0fe0638cc32c8d0add9 99 PANTHER PTHR24093:SF50 14 90 4.0E-14 T 25-04-2016 SMA_RS09520 eea69855e334f0fe0638cc32c8d0add9 99 Pfam PF00403 Heavy-metal-associated domain 17 77 2.6E-18 T 25-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 SMA_RS09520 eea69855e334f0fe0638cc32c8d0add9 99 ProSitePatterns PS01047 Heavy-metal-associated domain. 20 49 - T 25-04-2016 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 SMA_RS09520 eea69855e334f0fe0638cc32c8d0add9 99 PANTHER PTHR24093 14 90 4.0E-14 T 25-04-2016 SMA_RS09520 eea69855e334f0fe0638cc32c8d0add9 99 SUPERFAMILY SSF55008 11 83 3.27E-23 T 25-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 SMA_RS09520 eea69855e334f0fe0638cc32c8d0add9 99 PRINTS PR00946 Mercury scavenger protein signature 68 82 6.0E-9 T 25-04-2016 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 SMA_RS09520 eea69855e334f0fe0638cc32c8d0add9 99 PRINTS PR00946 Mercury scavenger protein signature 23 39 6.0E-9 T 25-04-2016 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 SMA_RS09520 eea69855e334f0fe0638cc32c8d0add9 99 PRINTS PR00946 Mercury scavenger protein signature 12 23 6.0E-9 T 25-04-2016 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 SMA_RS09520 eea69855e334f0fe0638cc32c8d0add9 99 PRINTS PR00946 Mercury scavenger protein signature 39 54 6.0E-9 T 25-04-2016 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 SMA_RS09520 eea69855e334f0fe0638cc32c8d0add9 99 Gene3D G3DSA:3.30.70.100 12 80 7.4E-26 T 25-04-2016 SMA_RS04590 b2e87ab4f0fcce3c8bffb455579b51ce 185 Pfam PF00717 Peptidase S24-like 42 94 2.9E-6 T 25-04-2016 IPR019759 Peptidase S24/S26A/S26B SMA_RS04590 b2e87ab4f0fcce3c8bffb455579b51ce 185 SUPERFAMILY SSF51306 24 182 8.5E-36 T 25-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C SMA_RS04590 b2e87ab4f0fcce3c8bffb455579b51ce 185 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 136 155 9.7E-9 T 25-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 SMA_RS04590 b2e87ab4f0fcce3c8bffb455579b51ce 185 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 71 83 9.7E-9 T 25-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 SMA_RS04590 b2e87ab4f0fcce3c8bffb455579b51ce 185 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 26 42 9.7E-9 T 25-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 SMA_RS04590 b2e87ab4f0fcce3c8bffb455579b51ce 185 PANTHER PTHR12383 1 182 3.2E-21 T 25-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 SMA_RS04590 b2e87ab4f0fcce3c8bffb455579b51ce 185 Gene3D G3DSA:2.10.109.10 136 182 2.3E-20 T 25-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain SMA_RS04590 b2e87ab4f0fcce3c8bffb455579b51ce 185 Gene3D G3DSA:2.10.109.10 23 81 2.3E-20 T 25-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain SMA_RS04590 b2e87ab4f0fcce3c8bffb455579b51ce 185 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 10 176 3.7E-36 T 25-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 SMA_RS06450 d52cd86b2cbbe412009c74d75c87d054 231 PANTHER PTHR10859:SF84 5 225 1.1E-47 T 25-04-2016 SMA_RS06450 d52cd86b2cbbe412009c74d75c87d054 231 SUPERFAMILY SSF53448 6 224 6.65E-37 T 25-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SMA_RS06450 d52cd86b2cbbe412009c74d75c87d054 231 Gene3D G3DSA:3.90.550.10 6 214 4.7E-19 T 25-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SMA_RS06450 d52cd86b2cbbe412009c74d75c87d054 231 PANTHER PTHR10859 5 225 1.1E-47 T 25-04-2016 SMA_RS06450 d52cd86b2cbbe412009c74d75c87d054 231 Pfam PF00535 Glycosyl transferase family 2 6 163 4.7E-24 T 25-04-2016 IPR001173 Glycosyltransferase 2-like SMA_RS09305 1fdc72c104ef76ba9753084913d341ed 62 TIGRFAM TIGR03949 bact_IIb_cerein: class IIb bacteriocin, lactobin A/cerein 7B family 5 44 2.1E-6 T 25-04-2016 IPR023991 Bacteriocin, class IIb, lactobin A/cerein 7B family SMA_RS05350 8a03b4bd048aec345d466377a2841dff 451 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 340 450 7.5E-32 T 25-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 SMA_RS05350 8a03b4bd048aec345d466377a2841dff 451 SUPERFAMILY SSF55424 337 451 6.01E-32 T 25-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 SMA_RS05350 8a03b4bd048aec345d466377a2841dff 451 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 319 2.8E-68 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMA_RS05350 8a03b4bd048aec345d466377a2841dff 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 133 151 6.0E-27 T 25-04-2016 SMA_RS05350 8a03b4bd048aec345d466377a2841dff 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 170 188 6.0E-27 T 25-04-2016 SMA_RS05350 8a03b4bd048aec345d466377a2841dff 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 284 306 6.0E-27 T 25-04-2016 SMA_RS05350 8a03b4bd048aec345d466377a2841dff 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 6.0E-27 T 25-04-2016 SMA_RS05350 8a03b4bd048aec345d466377a2841dff 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 255 271 6.0E-27 T 25-04-2016 SMA_RS05350 8a03b4bd048aec345d466377a2841dff 451 PANTHER PTHR22912 2 451 1.9E-235 T 25-04-2016 SMA_RS05350 8a03b4bd048aec345d466377a2841dff 451 TIGRFAM TIGR01421 gluta_reduc_1: glutathione-disulfide reductase 4 451 2.0E-210 T 25-04-2016 IPR006322 Glutathione reductase, eukaryote/bacterial GO:0004362|GO:0006749|GO:0050660|GO:0050661|GO:0055114 KEGG: 00480+1.8.1.7|MetaCyc: PWY-4081 SMA_RS05350 8a03b4bd048aec345d466377a2841dff 451 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 40 50 - T 25-04-2016 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 SMA_RS05350 8a03b4bd048aec345d466377a2841dff 451 Gene3D G3DSA:3.50.50.60 5 136 4.5E-41 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMA_RS05350 8a03b4bd048aec345d466377a2841dff 451 Gene3D G3DSA:3.30.390.30 327 451 9.7E-38 T 25-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 SMA_RS05350 8a03b4bd048aec345d466377a2841dff 451 SUPERFAMILY SSF51905 4 360 9.88E-58 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMA_RS05350 8a03b4bd048aec345d466377a2841dff 451 PIRSF PIRSF000350 1 447 9.3E-73 T 25-04-2016 SMA_RS05350 8a03b4bd048aec345d466377a2841dff 451 Gene3D G3DSA:3.50.50.60 137 326 6.6E-50 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMA_RS05350 8a03b4bd048aec345d466377a2841dff 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 299 306 5.6E-63 T 25-04-2016 SMA_RS05350 8a03b4bd048aec345d466377a2841dff 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 336 357 5.6E-63 T 25-04-2016 SMA_RS05350 8a03b4bd048aec345d466377a2841dff 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 5.6E-63 T 25-04-2016 SMA_RS05350 8a03b4bd048aec345d466377a2841dff 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 170 195 5.6E-63 T 25-04-2016 SMA_RS05350 8a03b4bd048aec345d466377a2841dff 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 39 54 5.6E-63 T 25-04-2016 SMA_RS05350 8a03b4bd048aec345d466377a2841dff 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 256 270 5.6E-63 T 25-04-2016 SMA_RS05350 8a03b4bd048aec345d466377a2841dff 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 136 145 5.6E-63 T 25-04-2016 SMA_RS05350 8a03b4bd048aec345d466377a2841dff 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 403 418 5.6E-63 T 25-04-2016 SMA_RS05350 8a03b4bd048aec345d466377a2841dff 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 425 445 5.6E-63 T 25-04-2016 SMA_RS05350 8a03b4bd048aec345d466377a2841dff 451 PANTHER PTHR22912:SF106 2 451 1.9E-235 T 25-04-2016 SMA_RS09550 138ff0e2f2a8a92f5910cea2f758c388 86 Gene3D G3DSA:1.10.10.60 6 78 3.3E-15 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMA_RS09550 138ff0e2f2a8a92f5910cea2f758c388 86 SUPERFAMILY SSF46689 2 83 2.15E-16 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMA_RS09550 138ff0e2f2a8a92f5910cea2f758c388 86 Pfam PF01527 Transposase 3 69 7.7E-11 T 25-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 SMA_RS03760 3aeaed08d5d47591b3d3ea0ccd2fd59c 178 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 10 175 3.6E-30 T 25-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 SMA_RS03760 3aeaed08d5d47591b3d3ea0ccd2fd59c 178 SUPERFAMILY SSF47928 5 98 1.23E-19 T 25-04-2016 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain SMA_RS03760 3aeaed08d5d47591b3d3ea0ccd2fd59c 178 PRINTS PR00125 ATP synthase delta subunit signature 8 27 2.6E-18 T 25-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 SMA_RS03760 3aeaed08d5d47591b3d3ea0ccd2fd59c 178 PRINTS PR00125 ATP synthase delta subunit signature 75 86 2.6E-18 T 25-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 SMA_RS03760 3aeaed08d5d47591b3d3ea0ccd2fd59c 178 PRINTS PR00125 ATP synthase delta subunit signature 152 170 2.6E-18 T 25-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 SMA_RS03760 3aeaed08d5d47591b3d3ea0ccd2fd59c 178 PRINTS PR00125 ATP synthase delta subunit signature 137 152 2.6E-18 T 25-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 SMA_RS03760 3aeaed08d5d47591b3d3ea0ccd2fd59c 178 Hamap MF_01416 ATP synthase subunit delta [atpD]. 4 178 15.188 T 25-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 SMA_RS03760 3aeaed08d5d47591b3d3ea0ccd2fd59c 178 Pfam PF00213 ATP synthase delta (OSCP) subunit 10 177 1.1E-38 T 25-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 SMA_RS03760 3aeaed08d5d47591b3d3ea0ccd2fd59c 178 PANTHER PTHR11910 12 171 5.7E-29 T 25-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 SMA_RS03760 3aeaed08d5d47591b3d3ea0ccd2fd59c 178 Gene3D G3DSA:1.10.520.20 8 95 2.2E-17 T 25-04-2016 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain SMA_RS05355 8355ca544c79ab7b7204ae92c77866e4 110 Gene3D G3DSA:3.40.30.10 6 108 8.2E-31 T 25-04-2016 IPR012336 Thioredoxin-like fold SMA_RS05355 8355ca544c79ab7b7204ae92c77866e4 110 SUPERFAMILY SSF52833 4 108 1.91E-21 T 25-04-2016 IPR012336 Thioredoxin-like fold SMA_RS05355 8355ca544c79ab7b7204ae92c77866e4 110 Pfam PF00085 Thioredoxin 25 109 4.1E-7 T 25-04-2016 IPR013766 Thioredoxin domain GO:0045454 SMA_RS05590 40644caa97a16a8cde6f08263ef377a8 300 Gene3D G3DSA:3.30.43.10 2 84 1.5E-31 T 25-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 SMA_RS05590 40644caa97a16a8cde6f08263ef377a8 300 SUPERFAMILY SSF56176 6 191 9.81E-47 T 25-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 SMA_RS05590 40644caa97a16a8cde6f08263ef377a8 300 Gene3D G3DSA:3.30.465.10 85 223 1.1E-47 T 25-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 SMA_RS05590 40644caa97a16a8cde6f08263ef377a8 300 SUPERFAMILY SSF56194 192 297 3.27E-36 T 25-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SMA_RS05590 40644caa97a16a8cde6f08263ef377a8 300 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 20 296 9.2E-69 T 25-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SMA_RS05590 40644caa97a16a8cde6f08263ef377a8 300 Pfam PF01565 FAD binding domain 33 161 3.1E-26 T 25-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 SMA_RS05590 40644caa97a16a8cde6f08263ef377a8 300 PANTHER PTHR21071:SF4 1 300 1.3E-126 T 25-04-2016 SMA_RS05590 40644caa97a16a8cde6f08263ef377a8 300 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 197 295 1.2E-26 T 25-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SMA_RS05590 40644caa97a16a8cde6f08263ef377a8 300 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 300 93.795 T 25-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SMA_RS05590 40644caa97a16a8cde6f08263ef377a8 300 Gene3D G3DSA:3.90.78.10 224 298 2.2E-31 T 25-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SMA_RS05590 40644caa97a16a8cde6f08263ef377a8 300 PANTHER PTHR21071 1 300 1.3E-126 T 25-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SMA_RS07740 3697da1aaac4c7b6d24539ff0343cb5b 108 PANTHER PTHR30561:SF1 1 103 1.6E-34 T 25-04-2016 SMA_RS07740 3697da1aaac4c7b6d24539ff0343cb5b 108 PANTHER PTHR30561 1 103 1.6E-34 T 25-04-2016 SMA_RS07740 3697da1aaac4c7b6d24539ff0343cb5b 108 Pfam PF00893 Small Multidrug Resistance protein 1 93 4.7E-24 T 25-04-2016 IPR000390 Small multidrug resistance protein family GO:0016021 SMA_RS07740 3697da1aaac4c7b6d24539ff0343cb5b 108 SUPERFAMILY SSF103481 5 104 5.36E-20 T 25-04-2016 SMA_RS02205 dfc98b813ad03ed3e4fdbe943dd52fdf 396 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 2 390 27.539 T 25-04-2016 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 SMA_RS02205 dfc98b813ad03ed3e4fdbe943dd52fdf 396 Gene3D G3DSA:3.30.300.20 198 289 6.5E-28 T 25-04-2016 IPR015946 K homology domain-like, alpha/beta SMA_RS02205 dfc98b813ad03ed3e4fdbe943dd52fdf 396 Gene3D G3DSA:3.30.1480.10 1 124 8.5E-40 T 25-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 SMA_RS02205 dfc98b813ad03ed3e4fdbe943dd52fdf 396 SUPERFAMILY SSF50249 132 198 9.03E-17 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMA_RS02205 dfc98b813ad03ed3e4fdbe943dd52fdf 396 SUPERFAMILY SSF54814 199 271 1.63E-21 T 25-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 SMA_RS02205 dfc98b813ad03ed3e4fdbe943dd52fdf 396 SMART SM00322 229 306 1.9 T 25-04-2016 IPR004087 K Homology domain GO:0003676 SMA_RS02205 dfc98b813ad03ed3e4fdbe943dd52fdf 396 SMART SM00322 315 381 1.3E-5 T 25-04-2016 IPR004087 K Homology domain GO:0003676 SMA_RS02205 dfc98b813ad03ed3e4fdbe943dd52fdf 396 SUPERFAMILY SSF69705 1 124 1.83E-36 T 25-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 SMA_RS02205 dfc98b813ad03ed3e4fdbe943dd52fdf 396 Pfam PF13184 NusA-like KH domain 229 310 8.5E-31 T 25-04-2016 IPR025249 KH domain, NusA-like GO:0003723 SMA_RS02205 dfc98b813ad03ed3e4fdbe943dd52fdf 396 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 4 356 1.6E-113 T 25-04-2016 IPR010213 Transcription termination factor NusA GO:0003723 SMA_RS02205 dfc98b813ad03ed3e4fdbe943dd52fdf 396 Pfam PF08529 NusA N-terminal domain 4 123 1.0E-31 T 25-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 SMA_RS02205 dfc98b813ad03ed3e4fdbe943dd52fdf 396 Gene3D G3DSA:2.40.50.140 128 197 4.1E-27 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMA_RS02205 dfc98b813ad03ed3e4fdbe943dd52fdf 396 PANTHER PTHR22648 1 396 5.1E-144 T 25-04-2016 SMA_RS02205 dfc98b813ad03ed3e4fdbe943dd52fdf 396 SUPERFAMILY SSF54814 292 357 2.09E-16 T 25-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 SMA_RS02205 dfc98b813ad03ed3e4fdbe943dd52fdf 396 PANTHER PTHR22648:SF0 1 396 5.1E-144 T 25-04-2016 SMA_RS02205 dfc98b813ad03ed3e4fdbe943dd52fdf 396 Gene3D G3DSA:3.30.300.20 291 359 2.6E-32 T 25-04-2016 IPR015946 K homology domain-like, alpha/beta SMA_RS10545 7a536277b9a80187050f16ca38c33711 258 SUPERFAMILY SSF109709 88 197 3.14E-34 T 25-04-2016 SMA_RS10545 7a536277b9a80187050f16ca38c33711 258 SUPERFAMILY SSF110849 7 98 6.54E-27 T 25-04-2016 IPR003115 ParB/Sulfiredoxin SMA_RS10545 7a536277b9a80187050f16ca38c33711 258 Pfam PF02195 ParB-like nuclease domain 7 95 9.2E-28 T 25-04-2016 IPR003115 ParB/Sulfiredoxin SMA_RS10545 7a536277b9a80187050f16ca38c33711 258 PANTHER PTHR33375:SF3 3 258 3.6E-98 T 25-04-2016 SMA_RS10545 7a536277b9a80187050f16ca38c33711 258 PANTHER PTHR33375 3 258 3.6E-98 T 25-04-2016 SMA_RS10545 7a536277b9a80187050f16ca38c33711 258 Gene3D G3DSA:3.90.1530.10 3 102 3.4E-36 T 25-04-2016 SMA_RS10545 7a536277b9a80187050f16ca38c33711 258 SMART SM00470 6 96 5.1E-36 T 25-04-2016 IPR003115 ParB/Sulfiredoxin SMA_RS10545 7a536277b9a80187050f16ca38c33711 258 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 3 181 2.6E-60 T 25-04-2016 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 SMA_RS07825 866d3a9927d9a888ee5ab02a4e6a1588 80 PANTHER PTHR13256 2 74 2.4E-21 T 25-04-2016 SMA_RS07825 866d3a9927d9a888ee5ab02a4e6a1588 80 Pfam PF13302 Acetyltransferase (GNAT) domain 16 72 1.2E-7 T 25-04-2016 IPR000182 GNAT domain GO:0008080 SMA_RS07825 866d3a9927d9a888ee5ab02a4e6a1588 80 Gene3D G3DSA:3.40.630.30 11 79 1.6E-13 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMA_RS07825 866d3a9927d9a888ee5ab02a4e6a1588 80 SUPERFAMILY SSF55729 10 78 4.25E-12 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMA_RS07825 866d3a9927d9a888ee5ab02a4e6a1588 80 PANTHER PTHR13256:SF31 2 74 2.4E-21 T 25-04-2016 SMA_RS05965 6a90c9f3799e6900526445cfeff60e19 226 Gene3D G3DSA:1.10.10.10 124 216 5.1E-14 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMA_RS05965 6a90c9f3799e6900526445cfeff60e19 226 PANTHER PTHR26402:SF316 1 214 2.4E-62 T 25-04-2016 SMA_RS05965 6a90c9f3799e6900526445cfeff60e19 226 Pfam PF00072 Response regulator receiver domain 3 112 1.1E-29 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMA_RS05965 6a90c9f3799e6900526445cfeff60e19 226 PANTHER PTHR26402 1 214 2.4E-62 T 25-04-2016 SMA_RS05965 6a90c9f3799e6900526445cfeff60e19 226 SMART SM00448 1 112 5.4E-45 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMA_RS05965 6a90c9f3799e6900526445cfeff60e19 226 SUPERFAMILY SSF52172 1 121 3.42E-39 T 25-04-2016 IPR011006 CheY-like superfamily SMA_RS05965 6a90c9f3799e6900526445cfeff60e19 226 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 213 9.0E-11 T 25-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SMA_RS05965 6a90c9f3799e6900526445cfeff60e19 226 SMART SM00862 145 223 5.2E-6 T 25-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SMA_RS05965 6a90c9f3799e6900526445cfeff60e19 226 SUPERFAMILY SSF46894 122 214 7.94E-13 T 25-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SMA_RS05965 6a90c9f3799e6900526445cfeff60e19 226 Gene3D G3DSA:3.40.50.2300 1 121 1.8E-41 T 25-04-2016 SMA_RS09805 35d94d94c73ccea47bdd692c28bef9d3 271 PRINTS PR00701 60kDa inner membrane protein signature 119 142 2.5E-9 T 25-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 SMA_RS09805 35d94d94c73ccea47bdd692c28bef9d3 271 PRINTS PR00701 60kDa inner membrane protein signature 203 226 2.5E-9 T 25-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 SMA_RS09805 35d94d94c73ccea47bdd692c28bef9d3 271 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 54 236 6.0E-57 T 25-04-2016 IPR028055 Membrane insertase YidC/Oxa1, C-terminal SMA_RS09805 35d94d94c73ccea47bdd692c28bef9d3 271 Pfam PF02096 60Kd inner membrane protein 55 236 1.6E-52 T 25-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 SMA_RS09805 35d94d94c73ccea47bdd692c28bef9d3 271 PANTHER PTHR12428 24 238 6.8E-57 T 25-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 SMA_RS09805 35d94d94c73ccea47bdd692c28bef9d3 271 Hamap MF_01811 Membrane protein insertase YidC [yidC]. 2 240 29.659 T 25-04-2016 IPR023060 Membrane insertase YidC/YidC1/YidC2, Firmicutes SMA_RS03685 239c95291dc3d280424f397396d3d445 419 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 407 2.1E-86 T 25-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 SMA_RS03685 239c95291dc3d280424f397396d3d445 419 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 415 4.3E-154 T 25-04-2016 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SMA_RS03685 239c95291dc3d280424f397396d3d445 419 Gene3D G3DSA:3.65.10.10 21 221 6.3E-61 T 25-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 SMA_RS03685 239c95291dc3d280424f397396d3d445 419 SUPERFAMILY SSF55205 1 418 1.14E-133 T 25-04-2016 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 SMA_RS03685 239c95291dc3d280424f397396d3d445 419 PANTHER PTHR21090 1 419 1.2E-167 T 25-04-2016 SMA_RS03685 239c95291dc3d280424f397396d3d445 419 Gene3D G3DSA:3.65.10.10 222 416 2.2E-57 T 25-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 SMA_RS03685 239c95291dc3d280424f397396d3d445 419 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 417 41.28 T 25-04-2016 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SMA_RS00005 db198c7bff932f9947c41a9cee6754a1 451 SUPERFAMILY SSF48295 358 451 1.2E-34 T 25-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 SMA_RS00005 db198c7bff932f9947c41a9cee6754a1 451 SMART SM00382 144 277 1.7E-10 T 25-04-2016 IPR003593 AAA+ ATPase domain SMA_RS00005 db198c7bff932f9947c41a9cee6754a1 451 Gene3D G3DSA:1.10.1750.10 356 451 2.9E-39 T 25-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 SMA_RS00005 db198c7bff932f9947c41a9cee6754a1 451 Pfam PF00308 Bacterial dnaA protein 112 330 1.9E-86 T 25-04-2016 IPR013317 Chromosomal replication initiator protein DnaA SMA_RS00005 db198c7bff932f9947c41a9cee6754a1 451 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 9 450 6.5E-156 T 25-04-2016 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 SMA_RS00005 db198c7bff932f9947c41a9cee6754a1 451 Gene3D G3DSA:3.40.50.300 105 278 6.5E-59 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS00005 db198c7bff932f9947c41a9cee6754a1 451 SUPERFAMILY SSF52540 111 325 7.06E-44 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS00005 db198c7bff932f9947c41a9cee6754a1 451 PANTHER PTHR30050 4 451 4.9E-174 T 25-04-2016 SMA_RS00005 db198c7bff932f9947c41a9cee6754a1 451 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 6 451 30.874 T 25-04-2016 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 SMA_RS00005 db198c7bff932f9947c41a9cee6754a1 451 SMART SM00760 360 429 2.8E-40 T 25-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 SMA_RS00005 db198c7bff932f9947c41a9cee6754a1 451 ProSitePatterns PS01008 DnaA protein signature. 410 429 - T 25-04-2016 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 SMA_RS00005 db198c7bff932f9947c41a9cee6754a1 451 Gene3D G3DSA:1.10.8.60 280 347 1.7E-20 T 25-04-2016 SMA_RS00005 db198c7bff932f9947c41a9cee6754a1 451 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 209 223 2.3E-48 T 25-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like SMA_RS00005 db198c7bff932f9947c41a9cee6754a1 451 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 145 165 2.3E-48 T 25-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like SMA_RS00005 db198c7bff932f9947c41a9cee6754a1 451 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 410 429 2.3E-48 T 25-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like SMA_RS00005 db198c7bff932f9947c41a9cee6754a1 451 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 245 272 2.3E-48 T 25-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like SMA_RS00005 db198c7bff932f9947c41a9cee6754a1 451 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 177 191 2.3E-48 T 25-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like SMA_RS00005 db198c7bff932f9947c41a9cee6754a1 451 PANTHER PTHR30050:SF2 4 451 4.9E-174 T 25-04-2016 SMA_RS00005 db198c7bff932f9947c41a9cee6754a1 451 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 361 429 3.2E-31 T 25-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 SMA_RS08805 c286f207cf73c3138cce23197d27993c 186 Hamap MF_00141 Elongation factor P [efp]. 1 186 46.479 T 25-04-2016 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 UniPathway: UPA00345 SMA_RS08805 c286f207cf73c3138cce23197d27993c 186 SUPERFAMILY SSF50249 129 186 8.91E-17 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMA_RS08805 c286f207cf73c3138cce23197d27993c 186 Pfam PF09285 Elongation factor P, C-terminal 130 185 2.8E-23 T 25-04-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 SMA_RS08805 c286f207cf73c3138cce23197d27993c 186 SUPERFAMILY SSF50249 65 127 4.8E-17 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMA_RS08805 c286f207cf73c3138cce23197d27993c 186 PANTHER PTHR30053 1 186 5.9E-75 T 25-04-2016 SMA_RS08805 c286f207cf73c3138cce23197d27993c 186 Gene3D G3DSA:2.30.30.30 1 64 1.1E-21 T 25-04-2016 IPR014722 Ribosomal protein L2 domain 2 SMA_RS08805 c286f207cf73c3138cce23197d27993c 186 ProSitePatterns PS01275 Elongation factor P signature. 151 170 - T 25-04-2016 IPR013852 Translation elongation factor P/YeiP, conserved site UniPathway: UPA00345 SMA_RS08805 c286f207cf73c3138cce23197d27993c 186 SMART SM01185 68 122 1.8E-19 T 25-04-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 SMA_RS08805 c286f207cf73c3138cce23197d27993c 186 Pfam PF01132 Elongation factor P (EF-P) OB domain 69 122 3.6E-16 T 25-04-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 SMA_RS08805 c286f207cf73c3138cce23197d27993c 186 Gene3D G3DSA:2.40.50.140 129 186 2.7E-25 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMA_RS08805 c286f207cf73c3138cce23197d27993c 186 TIGRFAM TIGR00038 efp: translation elongation factor P 2 186 2.0E-66 T 25-04-2016 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 UniPathway: UPA00345 SMA_RS08805 c286f207cf73c3138cce23197d27993c 186 SUPERFAMILY SSF50104 1 64 9.03E-17 T 25-04-2016 IPR008991 Translation protein SH3-like domain SMA_RS08805 c286f207cf73c3138cce23197d27993c 186 PIRSF PIRSF005901 1 186 1.8E-62 T 25-04-2016 IPR020599 Translation elongation factor P/YeiP UniPathway: UPA00345 SMA_RS08805 c286f207cf73c3138cce23197d27993c 186 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 3 61 2.0E-21 T 25-04-2016 IPR013185 Translation elongation factor, KOW-like UniPathway: UPA00345 SMA_RS08805 c286f207cf73c3138cce23197d27993c 186 SMART SM00841 130 185 6.0E-30 T 25-04-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 SMA_RS08805 c286f207cf73c3138cce23197d27993c 186 Gene3D G3DSA:2.40.50.140 66 128 4.6E-21 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMA_RS01615 d5e4755bb68a5562bdb64f04cf914894 384 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 5 359 6.4E-138 T 25-04-2016 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 SMA_RS01615 d5e4755bb68a5562bdb64f04cf914894 384 Gene3D G3DSA:2.10.230.10 143 216 4.9E-22 T 25-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 SMA_RS01615 d5e4755bb68a5562bdb64f04cf914894 384 PRINTS PR00625 DnaJ domain signature 41 61 1.0E-30 T 25-04-2016 IPR001623 DnaJ domain SMA_RS01615 d5e4755bb68a5562bdb64f04cf914894 384 PRINTS PR00625 DnaJ domain signature 61 80 1.0E-30 T 25-04-2016 IPR001623 DnaJ domain SMA_RS01615 d5e4755bb68a5562bdb64f04cf914894 384 PRINTS PR00625 DnaJ domain signature 25 40 1.0E-30 T 25-04-2016 IPR001623 DnaJ domain SMA_RS01615 d5e4755bb68a5562bdb64f04cf914894 384 PRINTS PR00625 DnaJ domain signature 7 25 1.0E-30 T 25-04-2016 IPR001623 DnaJ domain SMA_RS01615 d5e4755bb68a5562bdb64f04cf914894 384 SUPERFAMILY SSF49493 269 353 1.7E-22 T 25-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 SMA_RS01615 d5e4755bb68a5562bdb64f04cf914894 384 Pfam PF00226 DnaJ domain 6 66 2.5E-25 T 25-04-2016 IPR001623 DnaJ domain SMA_RS01615 d5e4755bb68a5562bdb64f04cf914894 384 Pfam PF00684 DnaJ central domain 153 217 5.2E-15 T 25-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 SMA_RS01615 d5e4755bb68a5562bdb64f04cf914894 384 Gene3D G3DSA:2.60.260.20 267 344 3.2E-21 T 25-04-2016 SMA_RS01615 d5e4755bb68a5562bdb64f04cf914894 384 Gene3D G3DSA:2.60.260.20 117 142 1.6E-23 T 25-04-2016 SMA_RS01615 d5e4755bb68a5562bdb64f04cf914894 384 Gene3D G3DSA:2.60.260.20 217 263 1.6E-23 T 25-04-2016 SMA_RS01615 d5e4755bb68a5562bdb64f04cf914894 384 SUPERFAMILY SSF49493 224 265 2.49E-19 T 25-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 SMA_RS01615 d5e4755bb68a5562bdb64f04cf914894 384 SUPERFAMILY SSF49493 120 144 2.49E-19 T 25-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 SMA_RS01615 d5e4755bb68a5562bdb64f04cf914894 384 SUPERFAMILY SSF46565 1 100 1.3E-34 T 25-04-2016 IPR001623 DnaJ domain SMA_RS01615 d5e4755bb68a5562bdb64f04cf914894 384 ProSitePatterns PS00636 Nt-dnaJ domain signature. 46 65 - T 25-04-2016 IPR018253 DnaJ domain, conserved site SMA_RS01615 d5e4755bb68a5562bdb64f04cf914894 384 PANTHER PTHR24078:SF190 2 360 1.1E-164 T 25-04-2016 SMA_RS01615 d5e4755bb68a5562bdb64f04cf914894 384 Gene3D G3DSA:1.10.287.110 1 112 9.0E-36 T 25-04-2016 IPR001623 DnaJ domain SMA_RS01615 d5e4755bb68a5562bdb64f04cf914894 384 Pfam PF01556 DnaJ C terminal domain 126 343 1.9E-41 T 25-04-2016 IPR002939 Chaperone DnaJ, C-terminal SMA_RS01615 d5e4755bb68a5562bdb64f04cf914894 384 PANTHER PTHR24078 2 360 1.1E-164 T 25-04-2016 SMA_RS01615 d5e4755bb68a5562bdb64f04cf914894 384 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 380 39.504 T 25-04-2016 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 SMA_RS01615 d5e4755bb68a5562bdb64f04cf914894 384 SUPERFAMILY SSF57938 140 220 3.27E-20 T 25-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 SMA_RS01615 d5e4755bb68a5562bdb64f04cf914894 384 SMART SM00271 4 61 5.0E-29 T 25-04-2016 IPR001623 DnaJ domain SMA_RS10650 5d8025aef6d6a63e7461df5342c70829 569 SMART SM00635 385 461 4.1E-8 T 25-04-2016 IPR003343 Bacterial Ig-like, group 2 SMA_RS10650 5d8025aef6d6a63e7461df5342c70829 569 Pfam PF02368 Bacterial Ig-like domain (group 2) 404 457 2.9E-11 T 25-04-2016 IPR003343 Bacterial Ig-like, group 2 SMA_RS10650 5d8025aef6d6a63e7461df5342c70829 569 Gene3D G3DSA:2.60.40.1080 388 463 8.7E-17 T 25-04-2016 SMA_RS10650 5d8025aef6d6a63e7461df5342c70829 569 Pfam PF16403 Domain of unknown function (DUF5011) 155 225 5.0E-11 T 25-04-2016 IPR032179 Domain of unknown function DUF5011 SMA_RS10650 5d8025aef6d6a63e7461df5342c70829 569 Pfam PF16403 Domain of unknown function (DUF5011) 78 148 3.3E-12 T 25-04-2016 IPR032179 Domain of unknown function DUF5011 SMA_RS10650 5d8025aef6d6a63e7461df5342c70829 569 Gene3D G3DSA:2.60.40.670 118 149 0.001 T 25-04-2016 IPR000601 PKD domain SMA_RS10650 5d8025aef6d6a63e7461df5342c70829 569 SUPERFAMILY SSF49373 388 463 3.26E-17 T 25-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments SMA_RS05430 e44568b02f99d0a7037312497491f88b 182 SUPERFAMILY SSF46689 3 70 9.23E-14 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMA_RS05430 e44568b02f99d0a7037312497491f88b 182 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 56 1.5E-7 T 25-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SMA_RS05430 e44568b02f99d0a7037312497491f88b 182 Gene3D G3DSA:1.10.357.10 1 174 1.1E-16 T 25-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 SMA_RS05430 e44568b02f99d0a7037312497491f88b 182 PANTHER PTHR30055 1 175 6.0E-21 T 25-04-2016 SMA_RS05430 e44568b02f99d0a7037312497491f88b 182 PANTHER PTHR30055:SF55 1 175 6.0E-21 T 25-04-2016 SMA_RS05440 517cb15dc59481d8659cbb6b50ef2c4b 163 SUPERFAMILY SSF52833 2 158 1.19E-41 T 25-04-2016 IPR012336 Thioredoxin-like fold SMA_RS05440 517cb15dc59481d8659cbb6b50ef2c4b 163 Gene3D G3DSA:3.40.30.10 2 163 1.5E-47 T 25-04-2016 IPR012336 Thioredoxin-like fold SMA_RS05440 517cb15dc59481d8659cbb6b50ef2c4b 163 Pfam PF08534 Redoxin 19 156 1.4E-23 T 25-04-2016 IPR013740 Redoxin GO:0016491 SMA_RS05440 517cb15dc59481d8659cbb6b50ef2c4b 163 PANTHER PTHR10681:SF81 1 163 5.6E-50 T 25-04-2016 SMA_RS05440 517cb15dc59481d8659cbb6b50ef2c4b 163 PANTHER PTHR10681 1 163 5.6E-50 T 25-04-2016 SMA_RS05440 517cb15dc59481d8659cbb6b50ef2c4b 163 Hamap MF_00269 Probable thiol peroxidase [tpx]. 1 161 35.837 T 25-04-2016 IPR002065 Putative thiol peroxidase Tpx GO:0008379|GO:0016209|GO:0055114 SMA_RS05440 517cb15dc59481d8659cbb6b50ef2c4b 163 ProSitePatterns PS01265 Tpx family signature. 81 92 - T 25-04-2016 IPR018219 Thiol peroxidase conserved site GO:0016684|GO:0055114 SMA_RS06590 1ab4388b0e4a3347e230174f1b936e56 745 Gene3D G3DSA:1.10.3720.10 504 745 4.1E-70 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SMA_RS06590 1ab4388b0e4a3347e230174f1b936e56 745 SUPERFAMILY SSF53850 283 505 2.58E-62 T 25-04-2016 SMA_RS06590 1ab4388b0e4a3347e230174f1b936e56 745 PANTHER PTHR30614:SF0 284 745 1.5E-232 T 25-04-2016 SMA_RS06590 1ab4388b0e4a3347e230174f1b936e56 745 PANTHER PTHR30614 284 745 1.5E-232 T 25-04-2016 SMA_RS06590 1ab4388b0e4a3347e230174f1b936e56 745 Gene3D G3DSA:3.40.190.10 207 251 3.1E-38 T 25-04-2016 SMA_RS06590 1ab4388b0e4a3347e230174f1b936e56 745 Gene3D G3DSA:3.40.190.10 284 362 3.8E-40 T 25-04-2016 SMA_RS06590 1ab4388b0e4a3347e230174f1b936e56 745 Gene3D G3DSA:3.40.190.10 25 113 3.1E-38 T 25-04-2016 SMA_RS06590 1ab4388b0e4a3347e230174f1b936e56 745 Gene3D G3DSA:3.40.190.10 465 503 3.8E-40 T 25-04-2016 SMA_RS06590 1ab4388b0e4a3347e230174f1b936e56 745 SMART SM00079 27 249 1.1E-5 T 25-04-2016 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 SMA_RS06590 1ab4388b0e4a3347e230174f1b936e56 745 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 287 504 8.2E-57 T 25-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SMA_RS06590 1ab4388b0e4a3347e230174f1b936e56 745 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 29 248 2.5E-57 T 25-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SMA_RS06590 1ab4388b0e4a3347e230174f1b936e56 745 Gene3D G3DSA:3.40.190.10 115 199 4.6E-24 T 25-04-2016 SMA_RS06590 1ab4388b0e4a3347e230174f1b936e56 745 Gene3D G3DSA:3.40.190.10 363 464 3.3E-24 T 25-04-2016 SMA_RS06590 1ab4388b0e4a3347e230174f1b936e56 745 SUPERFAMILY SSF161098 536 730 6.15E-46 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SMA_RS06590 1ab4388b0e4a3347e230174f1b936e56 745 SMART SM00062 285 506 4.4E-52 T 25-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SMA_RS06590 1ab4388b0e4a3347e230174f1b936e56 745 SMART SM00062 27 250 1.0E-52 T 25-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SMA_RS06590 1ab4388b0e4a3347e230174f1b936e56 745 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 535 639 4.6E-23 T 25-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 SMA_RS06590 1ab4388b0e4a3347e230174f1b936e56 745 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 558 745 7.5E-26 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SMA_RS06590 1ab4388b0e4a3347e230174f1b936e56 745 SUPERFAMILY SSF53850 7 250 3.56E-61 T 25-04-2016 SMA_RS09860 ae7fd4935c391e372ebfaabf19f18ddb 433 Pfam PF13541 Subunit ChlI of Mg-chelatase 341 405 2.1E-8 T 25-04-2016 SMA_RS09860 ae7fd4935c391e372ebfaabf19f18ddb 433 Pfam PF13481 AAA domain 59 198 8.5E-16 T 25-04-2016 SMA_RS09860 ae7fd4935c391e372ebfaabf19f18ddb 433 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 428 2.6E-179 T 25-04-2016 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 SMA_RS09860 ae7fd4935c391e372ebfaabf19f18ddb 433 SUPERFAMILY SSF52540 48 267 4.89E-49 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS09860 ae7fd4935c391e372ebfaabf19f18ddb 433 SUPERFAMILY SSF54211 279 432 1.06E-39 T 25-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SMA_RS09860 ae7fd4935c391e372ebfaabf19f18ddb 433 SUPERFAMILY SSF54211 231 245 1.06E-39 T 25-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SMA_RS09860 ae7fd4935c391e372ebfaabf19f18ddb 433 PANTHER PTHR32472 1 433 9.8E-204 T 25-04-2016 SMA_RS09860 ae7fd4935c391e372ebfaabf19f18ddb 433 PRINTS PR01874 DNA repair protein radA signature 59 87 1.1E-76 T 25-04-2016 SMA_RS09860 ae7fd4935c391e372ebfaabf19f18ddb 433 PRINTS PR01874 DNA repair protein radA signature 298 321 1.1E-76 T 25-04-2016 SMA_RS09860 ae7fd4935c391e372ebfaabf19f18ddb 433 PRINTS PR01874 DNA repair protein radA signature 100 117 1.1E-76 T 25-04-2016 SMA_RS09860 ae7fd4935c391e372ebfaabf19f18ddb 433 PRINTS PR01874 DNA repair protein radA signature 189 217 1.1E-76 T 25-04-2016 SMA_RS09860 ae7fd4935c391e372ebfaabf19f18ddb 433 PRINTS PR01874 DNA repair protein radA signature 224 250 1.1E-76 T 25-04-2016 SMA_RS09860 ae7fd4935c391e372ebfaabf19f18ddb 433 PRINTS PR01874 DNA repair protein radA signature 150 174 1.1E-76 T 25-04-2016 SMA_RS09860 ae7fd4935c391e372ebfaabf19f18ddb 433 SMART SM00382 67 220 8.5E-11 T 25-04-2016 IPR003593 AAA+ ATPase domain SMA_RS09860 ae7fd4935c391e372ebfaabf19f18ddb 433 Gene3D G3DSA:3.30.230.10 264 432 8.3E-35 T 25-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SMA_RS09860 ae7fd4935c391e372ebfaabf19f18ddb 433 Gene3D G3DSA:3.40.50.300 35 252 1.5E-50 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS07865 ef12efe6b486f475f6ce32ebdf26540e 245 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 5 236 4.2E-96 T 25-04-2016 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 SMA_RS07865 ef12efe6b486f475f6ce32ebdf26540e 245 PIRSF PIRSF005650 1 245 1.2E-91 T 25-04-2016 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 SMA_RS07865 ef12efe6b486f475f6ce32ebdf26540e 245 Gene3D G3DSA:3.40.1160.10 2 237 9.2E-84 T 25-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SMA_RS07865 ef12efe6b486f475f6ce32ebdf26540e 245 Pfam PF00696 Amino acid kinase family 6 216 3.3E-27 T 25-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SMA_RS07865 ef12efe6b486f475f6ce32ebdf26540e 245 PANTHER PTHR21499:SF23 1 241 1.6E-110 T 25-04-2016 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 SMA_RS07865 ef12efe6b486f475f6ce32ebdf26540e 245 SUPERFAMILY SSF53633 3 238 3.53E-72 T 25-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SMA_RS07865 ef12efe6b486f475f6ce32ebdf26540e 245 PANTHER PTHR21499 1 241 1.6E-110 T 25-04-2016 SMA_RS07865 ef12efe6b486f475f6ce32ebdf26540e 245 Hamap MF_01220_B Uridylate kinase [pyrH]. 3 237 43.485 T 25-04-2016 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 SMA_RS05945 54ad946ecc257f112b3e3c72902acf85 1024 Pfam PF04851 Type III restriction enzyme, res subunit 261 445 4.0E-29 T 25-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 SMA_RS05945 54ad946ecc257f112b3e3c72902acf85 1024 SMART SM00487 258 477 3.4E-14 T 25-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain SMA_RS05945 54ad946ecc257f112b3e3c72902acf85 1024 Pfam PF12008 Type I restriction and modification enzyme - subunit R C terminal 729 988 1.3E-17 T 25-04-2016 IPR022625 Type-1 restriction enzyme R protein, C-terminal SMA_RS05945 54ad946ecc257f112b3e3c72902acf85 1024 TIGRFAM TIGR00348 hsdR: type I site-specific deoxyribonuclease, HsdR family 10 708 1.1E-91 T 25-04-2016 IPR004473 Restriction endonuclease, type I, HsdR GO:0003677|GO:0005524|GO:0009035|GO:0009307 SMA_RS05945 54ad946ecc257f112b3e3c72902acf85 1024 Gene3D G3DSA:3.40.50.300 257 447 7.1E-19 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS05945 54ad946ecc257f112b3e3c72902acf85 1024 PANTHER PTHR30195:SF16 10 713 7.6E-89 T 25-04-2016 SMA_RS05945 54ad946ecc257f112b3e3c72902acf85 1024 PANTHER PTHR30195 10 713 7.6E-89 T 25-04-2016 SMA_RS05945 54ad946ecc257f112b3e3c72902acf85 1024 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 5 203 2.2E-14 T 25-04-2016 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 SMA_RS05945 54ad946ecc257f112b3e3c72902acf85 1024 SUPERFAMILY SSF52540 215 454 2.13E-26 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS05480 c2df13e6eff93d171475418156cb4192 466 Pfam PF00392 Bacterial regulatory proteins, gntR family 14 77 5.3E-15 T 25-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SMA_RS05480 c2df13e6eff93d171475418156cb4192 466 SUPERFAMILY SSF53383 73 465 9.82E-72 T 25-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SMA_RS05480 c2df13e6eff93d171475418156cb4192 466 Gene3D G3DSA:3.90.1150.10 348 466 3.6E-4 T 25-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SMA_RS05480 c2df13e6eff93d171475418156cb4192 466 Gene3D G3DSA:3.40.640.10 145 347 1.2E-44 T 25-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SMA_RS05480 c2df13e6eff93d171475418156cb4192 466 Gene3D G3DSA:1.10.10.10 5 78 6.2E-25 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMA_RS05480 c2df13e6eff93d171475418156cb4192 466 PANTHER PTHR11751 85 465 6.4E-106 T 25-04-2016 SMA_RS05480 c2df13e6eff93d171475418156cb4192 466 SMART SM00345 18 77 1.8E-14 T 25-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SMA_RS05480 c2df13e6eff93d171475418156cb4192 466 SUPERFAMILY SSF46785 7 85 1.4E-19 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMA_RS05480 c2df13e6eff93d171475418156cb4192 466 PANTHER PTHR11751:SF10 85 465 6.4E-106 T 25-04-2016 SMA_RS00255 e086af0a4a94a712aa75765c412f7d02 339 PANTHER PTHR10520 6 329 9.4E-193 T 25-04-2016 SMA_RS00255 e086af0a4a94a712aa75765c412f7d02 339 Pfam PF00586 AIR synthase related protein, N-terminal domain 61 161 5.4E-17 T 25-04-2016 IPR016188 PurM-like, N-terminal domain SMA_RS00255 e086af0a4a94a712aa75765c412f7d02 339 SUPERFAMILY SSF55326 5 168 2.99E-48 T 25-04-2016 SMA_RS00255 e086af0a4a94a712aa75765c412f7d02 339 Gene3D G3DSA:3.90.650.10 169 338 6.6E-61 T 25-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain SMA_RS00255 e086af0a4a94a712aa75765c412f7d02 339 Gene3D G3DSA:3.30.1330.10 19 168 6.8E-62 T 25-04-2016 IPR016188 PurM-like, N-terminal domain SMA_RS00255 e086af0a4a94a712aa75765c412f7d02 339 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 5 330 1.8E-135 T 25-04-2016 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 SMA_RS00255 e086af0a4a94a712aa75765c412f7d02 339 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 4 339 45.711 T 25-04-2016 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 SMA_RS00255 e086af0a4a94a712aa75765c412f7d02 339 Pfam PF02769 AIR synthase related protein, C-terminal domain 175 338 2.2E-33 T 25-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain SMA_RS00255 e086af0a4a94a712aa75765c412f7d02 339 SUPERFAMILY SSF56042 169 337 7.33E-53 T 25-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain SMA_RS01935 376bab07c590b544767068ede34e4de8 420 PANTHER PTHR30508:SF0 1 418 1.4E-134 T 25-04-2016 SMA_RS01935 376bab07c590b544767068ede34e4de8 420 PANTHER PTHR30508 1 418 1.4E-134 T 25-04-2016 SMA_RS01935 376bab07c590b544767068ede34e4de8 420 SUPERFAMILY SSF101960 5 419 2.75E-116 T 25-04-2016 SMA_RS01935 376bab07c590b544767068ede34e4de8 420 TIGRFAM TIGR01981 sufD: FeS assembly protein SufD 132 408 2.5E-79 T 25-04-2016 IPR011542 SUF system FeS cluster assembly, SufD GO:0016226 SMA_RS01935 376bab07c590b544767068ede34e4de8 420 Pfam PF01458 Uncharacterized protein family (UPF0051) 167 392 3.3E-57 T 25-04-2016 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 SMA_RS01885 b7c0fac94b15b0b170b880ac2fd31df0 416 SUPERFAMILY SSF53686 5 360 7.73E-99 T 25-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme SMA_RS01885 b7c0fac94b15b0b170b880ac2fd31df0 416 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 42 55 - T 25-04-2016 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 SMA_RS01885 b7c0fac94b15b0b170b880ac2fd31df0 416 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 16 310 3.8E-78 T 25-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme SMA_RS01885 b7c0fac94b15b0b170b880ac2fd31df0 416 PANTHER PTHR10314 5 362 9.8E-162 T 25-04-2016 SMA_RS01885 b7c0fac94b15b0b170b880ac2fd31df0 416 SUPERFAMILY SSF55021 333 410 1.1E-11 T 25-04-2016 SMA_RS01885 b7c0fac94b15b0b170b880ac2fd31df0 416 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 323 415 1.6E-25 T 25-04-2016 IPR001721 ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19|UniPathway: UPA00047 SMA_RS01885 b7c0fac94b15b0b170b880ac2fd31df0 416 PANTHER PTHR10314:SF30 5 362 9.8E-162 T 25-04-2016 SMA_RS01885 b7c0fac94b15b0b170b880ac2fd31df0 416 TIGRFAM TIGR02079 THD1: threonine dehydratase 5 416 8.5E-180 T 25-04-2016 IPR011820 L-threonine dehydratase biosynthetic IlvA GO:0004794 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19|UniPathway: UPA00047 SMA_RS01885 b7c0fac94b15b0b170b880ac2fd31df0 416 Gene3D G3DSA:3.40.50.1100 101 341 1.2E-73 T 25-04-2016 SMA_RS01885 b7c0fac94b15b0b170b880ac2fd31df0 416 Gene3D G3DSA:3.40.50.1100 6 100 6.4E-8 T 25-04-2016 SMA_RS00760 38f41ea6810316e0758ee58850254064 420 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 101 4.0E-31 T 25-04-2016 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 SMA_RS00760 38f41ea6810316e0758ee58850254064 420 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 329 415 5.3E-19 T 25-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 SMA_RS00760 38f41ea6810316e0758ee58850254064 420 SMART SM01209 102 294 1.1E-131 T 25-04-2016 SMA_RS00760 38f41ea6810316e0758ee58850254064 420 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 418 1.3E-147 T 25-04-2016 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 SMA_RS00760 38f41ea6810316e0758ee58850254064 420 Gene3D G3DSA:3.30.1490.20 120 189 1.7E-31 T 25-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 SMA_RS00760 38f41ea6810316e0758ee58850254064 420 SUPERFAMILY SSF56059 103 320 7.95E-65 T 25-04-2016 SMA_RS00760 38f41ea6810316e0758ee58850254064 420 SMART SM01210 327 418 1.5E-28 T 25-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 SMA_RS00760 38f41ea6810316e0758ee58850254064 420 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 418 41.507 T 25-04-2016 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 SMA_RS00760 38f41ea6810316e0758ee58850254064 420 PANTHER PTHR10520 1 418 6.3E-227 T 25-04-2016 SMA_RS00760 38f41ea6810316e0758ee58850254064 420 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 288 295 - T 25-04-2016 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 SMA_RS00760 38f41ea6810316e0758ee58850254064 420 SUPERFAMILY SSF52440 1 101 1.01E-30 T 25-04-2016 IPR016185 Pre-ATP-grasp domain SMA_RS00760 38f41ea6810316e0758ee58850254064 420 SUPERFAMILY SSF51246 326 418 3.53E-21 T 25-04-2016 IPR011054 Rudiment single hybrid motif SMA_RS00760 38f41ea6810316e0758ee58850254064 420 Gene3D G3DSA:3.90.600.10 328 418 1.9E-21 T 25-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 SMA_RS00760 38f41ea6810316e0758ee58850254064 420 Gene3D G3DSA:3.40.50.20 2 94 7.3E-33 T 25-04-2016 IPR016185 Pre-ATP-grasp domain SMA_RS00760 38f41ea6810316e0758ee58850254064 420 Gene3D G3DSA:3.30.470.20 190 322 5.0E-58 T 25-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 SMA_RS00760 38f41ea6810316e0758ee58850254064 420 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 103 294 1.1E-79 T 25-04-2016 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 SMA_RS06290 c6e7d2ce9fcc41123eefeecef2d8c011 414 SUPERFAMILY SSF53244 294 411 3.43E-18 T 25-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SMA_RS06290 c6e7d2ce9fcc41123eefeecef2d8c011 414 PIRSF PIRSF001563 1 414 4.5E-116 T 25-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 SMA_RS06290 c6e7d2ce9fcc41123eefeecef2d8c011 414 Gene3D G3DSA:3.90.190.20 294 413 4.0E-21 T 25-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SMA_RS06290 c6e7d2ce9fcc41123eefeecef2d8c011 414 PANTHER PTHR11136 1 411 1.1E-108 T 25-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 SMA_RS06290 c6e7d2ce9fcc41123eefeecef2d8c011 414 SUPERFAMILY SSF53623 1 292 1.95E-81 T 25-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SMA_RS06290 c6e7d2ce9fcc41123eefeecef2d8c011 414 PANTHER PTHR11136:SF0 1 411 1.1E-108 T 25-04-2016 SMA_RS06290 c6e7d2ce9fcc41123eefeecef2d8c011 414 TIGRFAM TIGR01499 folC: bifunctional protein FolC 22 409 4.6E-115 T 25-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 SMA_RS06290 c6e7d2ce9fcc41123eefeecef2d8c011 414 Pfam PF08245 Mur ligase middle domain 44 267 2.7E-8 T 25-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SMA_RS06290 c6e7d2ce9fcc41123eefeecef2d8c011 414 Gene3D G3DSA:3.40.1190.10 1 292 3.9E-82 T 25-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SMA_RS10190 f24dd409b240960f0a335aeb526c6ef8 856 SUPERFAMILY SSF48334 255 552 2.75E-89 T 25-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 SMA_RS10190 f24dd409b240960f0a335aeb526c6ef8 856 SMART SM00534 595 782 4.3E-112 T 25-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 SMA_RS10190 f24dd409b240960f0a335aeb526c6ef8 856 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 7 853 0.0 T 25-04-2016 IPR005748 DNA mismatch repair protein MutS, type 1 GO:0005524|GO:0006298|GO:0030983 SMA_RS10190 f24dd409b240960f0a335aeb526c6ef8 856 SUPERFAMILY SSF52540 554 786 2.24E-60 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS10190 f24dd409b240960f0a335aeb526c6ef8 856 PANTHER PTHR11361:SF86 1 856 0.0 T 25-04-2016 SMA_RS10190 f24dd409b240960f0a335aeb526c6ef8 856 Pfam PF05192 MutS domain III 256 546 3.8E-43 T 25-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 SMA_RS10190 f24dd409b240960f0a335aeb526c6ef8 856 Pfam PF05188 MutS domain II 126 239 2.0E-18 T 25-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 SMA_RS10190 f24dd409b240960f0a335aeb526c6ef8 856 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 676 692 - T 25-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 SMA_RS10190 f24dd409b240960f0a335aeb526c6ef8 856 SMART SM00533 270 578 1.2E-113 T 25-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 SMA_RS10190 f24dd409b240960f0a335aeb526c6ef8 856 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 6 848 23.803 T 25-04-2016 IPR005748 DNA mismatch repair protein MutS, type 1 GO:0005524|GO:0006298|GO:0030983 SMA_RS10190 f24dd409b240960f0a335aeb526c6ef8 856 Gene3D G3DSA:3.40.1170.10 3 118 8.2E-49 T 25-04-2016 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 SMA_RS10190 f24dd409b240960f0a335aeb526c6ef8 856 Pfam PF01624 MutS domain I 8 118 4.8E-43 T 25-04-2016 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 SMA_RS10190 f24dd409b240960f0a335aeb526c6ef8 856 Gene3D G3DSA:1.10.1420.10 249 455 2.8E-54 T 25-04-2016 SMA_RS10190 f24dd409b240960f0a335aeb526c6ef8 856 Pfam PF00488 MutS domain V 598 785 1.8E-80 T 25-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 SMA_RS10190 f24dd409b240960f0a335aeb526c6ef8 856 Gene3D G3DSA:3.30.420.110 125 246 4.5E-32 T 25-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 SMA_RS10190 f24dd409b240960f0a335aeb526c6ef8 856 SUPERFAMILY SSF53150 118 265 8.63E-34 T 25-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 SMA_RS10190 f24dd409b240960f0a335aeb526c6ef8 856 PANTHER PTHR11361 1 856 0.0 T 25-04-2016 SMA_RS10190 f24dd409b240960f0a335aeb526c6ef8 856 SUPERFAMILY SSF55271 4 114 1.57E-41 T 25-04-2016 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 SMA_RS10190 f24dd409b240960f0a335aeb526c6ef8 856 Pfam PF05190 MutS family domain IV 415 505 5.5E-29 T 25-04-2016 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 SMA_RS10190 f24dd409b240960f0a335aeb526c6ef8 856 Gene3D G3DSA:3.40.50.300 554 785 1.8E-81 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS04480 17e460e6b8a0fdb3cd2f539b531afcf1 166 SUPERFAMILY SSF49777 8 158 6.15E-33 T 25-04-2016 IPR008914 Phosphatidylethanolamine-binding protein SMA_RS04480 17e460e6b8a0fdb3cd2f539b531afcf1 166 Pfam PF01161 Phosphatidylethanolamine-binding protein 26 160 3.0E-30 T 25-04-2016 IPR008914 Phosphatidylethanolamine-binding protein SMA_RS04480 17e460e6b8a0fdb3cd2f539b531afcf1 166 PANTHER PTHR30289 30 163 1.3E-31 T 25-04-2016 SMA_RS04480 17e460e6b8a0fdb3cd2f539b531afcf1 166 Gene3D G3DSA:3.90.280.10 6 160 1.5E-48 T 25-04-2016 IPR008914 Phosphatidylethanolamine-binding protein SMA_RS04480 17e460e6b8a0fdb3cd2f539b531afcf1 166 TIGRFAM TIGR00481 TIGR00481: Raf kinase inhibitor-like protein, YbhB/YbcL family 18 160 6.2E-38 T 25-04-2016 IPR005247 YbhB/YbcL SMA_RS05395 5297611ee4d3f4be37d85de868c1186c 292 PANTHER PTHR13767:SF2 2 291 2.8E-111 T 25-04-2016 SMA_RS05395 5297611ee4d3f4be37d85de868c1186c 292 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 2 291 18.605 T 25-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 SMA_RS05395 5297611ee4d3f4be37d85de868c1186c 292 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 24 177 8.0E-55 T 25-04-2016 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 SMA_RS05395 5297611ee4d3f4be37d85de868c1186c 292 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 2 214 1.7E-75 T 25-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 SMA_RS05395 5297611ee4d3f4be37d85de868c1186c 292 SUPERFAMILY SSF55120 1 231 5.18E-76 T 25-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 SMA_RS05395 5297611ee4d3f4be37d85de868c1186c 292 PANTHER PTHR13767 2 291 2.8E-111 T 25-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 SMA_RS05395 5297611ee4d3f4be37d85de868c1186c 292 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 178 233 1.1E-7 T 25-04-2016 IPR032819 tRNA pseudouridylate synthase B, C-terminal SMA_RS01825 412da26a9b4f14859808e09fdd95f28b 223 Gene3D G3DSA:1.10.3720.10 14 202 3.5E-34 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SMA_RS01825 412da26a9b4f14859808e09fdd95f28b 223 PANTHER PTHR30177:SF7 11 210 1.2E-98 T 25-04-2016 SMA_RS01825 412da26a9b4f14859808e09fdd95f28b 223 SUPERFAMILY SSF161098 18 203 3.92E-41 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SMA_RS01825 412da26a9b4f14859808e09fdd95f28b 223 PANTHER PTHR30177 11 210 1.2E-98 T 25-04-2016 SMA_RS01825 412da26a9b4f14859808e09fdd95f28b 223 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 41 209 1.3E-24 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SMA_RS01460 654e306471c0d13a9b52f49510a690a2 148 ProSitePatterns PS00783 Ribosomal protein L13 signature. 107 129 - T 25-04-2016 IPR023563 Ribosomal protein L13, conserved site GO:0003735|GO:0005840|GO:0006412 SMA_RS01460 654e306471c0d13a9b52f49510a690a2 148 PANTHER PTHR11545 4 145 1.6E-69 T 25-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 SMA_RS01460 654e306471c0d13a9b52f49510a690a2 148 Gene3D G3DSA:3.90.1180.10 5 143 3.5E-61 T 25-04-2016 IPR023564 Ribosomal protein L13 domain GO:0003735|GO:0005840|GO:0006412 SMA_RS01460 654e306471c0d13a9b52f49510a690a2 148 SUPERFAMILY SSF52161 6 145 1.44E-56 T 25-04-2016 IPR023564 Ribosomal protein L13 domain GO:0003735|GO:0005840|GO:0006412 SMA_RS01460 654e306471c0d13a9b52f49510a690a2 148 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 5 144 2.1E-58 T 25-04-2016 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 SMA_RS01460 654e306471c0d13a9b52f49510a690a2 148 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 17 143 26.083 T 25-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 SMA_RS01460 654e306471c0d13a9b52f49510a690a2 148 PIRSF PIRSF002181 1 147 8.8E-47 T 25-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 SMA_RS01460 654e306471c0d13a9b52f49510a690a2 148 Pfam PF00572 Ribosomal protein L13 16 140 2.8E-53 T 25-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 SMA_RS06185 8da808dde0fa659cc10aefa17cc32b23 249 Pfam PF04445 Putative SAM-dependent methyltransferase 90 220 1.6E-18 T 25-04-2016 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 SMA_RS06185 8da808dde0fa659cc10aefa17cc32b23 249 PANTHER PTHR36112:SF2 1 248 2.8E-44 T 25-04-2016 SMA_RS06185 8da808dde0fa659cc10aefa17cc32b23 249 SUPERFAMILY SSF53335 5 248 4.45E-48 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMA_RS06185 8da808dde0fa659cc10aefa17cc32b23 249 PANTHER PTHR36112 1 248 2.8E-44 T 25-04-2016 SMA_RS06185 8da808dde0fa659cc10aefa17cc32b23 249 Gene3D G3DSA:3.40.50.150 67 248 1.7E-42 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMA_RS03590 da48369816d901767384157628eb56e6 577 Gene3D G3DSA:3.50.30.10 135 258 3.3E-44 T 25-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 SMA_RS03590 da48369816d901767384157628eb56e6 577 SUPERFAMILY SSF51621 251 553 2.02E-108 T 25-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 SMA_RS03590 da48369816d901767384157628eb56e6 577 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 451 469 - T 25-04-2016 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 SMA_RS03590 da48369816d901767384157628eb56e6 577 Gene3D G3DSA:1.10.274.10 24 134 6.5E-40 T 25-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 SMA_RS03590 da48369816d901767384157628eb56e6 577 PIRSF PIRSF000732 1 577 5.7E-214 T 25-04-2016 IPR024692 Phosphotransferase system, enzyme I GO:0008965|GO:0009401 SMA_RS03590 da48369816d901767384157628eb56e6 577 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 186 197 - T 25-04-2016 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 SMA_RS03590 da48369816d901767384157628eb56e6 577 Pfam PF05524 PEP-utilising enzyme, N-terminal 6 128 1.9E-31 T 25-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 SMA_RS03590 da48369816d901767384157628eb56e6 577 Pfam PF00391 PEP-utilising enzyme, mobile domain 154 227 1.6E-23 T 25-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 SMA_RS03590 da48369816d901767384157628eb56e6 577 PANTHER PTHR22931 50 554 4.0E-205 T 25-04-2016 SMA_RS03590 da48369816d901767384157628eb56e6 577 PANTHER PTHR22931 13 29 4.0E-205 T 25-04-2016 SMA_RS03590 da48369816d901767384157628eb56e6 577 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 252 545 2.1E-128 T 25-04-2016 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 SMA_RS03590 da48369816d901767384157628eb56e6 577 SUPERFAMILY SSF52009 127 245 1.83E-37 T 25-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 SMA_RS03590 da48369816d901767384157628eb56e6 577 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 5 569 2.1E-230 T 25-04-2016 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 SMA_RS03590 da48369816d901767384157628eb56e6 577 SUPERFAMILY SSF47831 24 145 5.62E-35 T 25-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 SMA_RS03590 da48369816d901767384157628eb56e6 577 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 295 314 1.7E-32 T 25-04-2016 SMA_RS03590 da48369816d901767384157628eb56e6 577 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 451 466 1.7E-32 T 25-04-2016 SMA_RS03590 da48369816d901767384157628eb56e6 577 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 468 483 1.7E-32 T 25-04-2016 SMA_RS03590 da48369816d901767384157628eb56e6 577 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 504 516 1.7E-32 T 25-04-2016 SMA_RS03590 da48369816d901767384157628eb56e6 577 Gene3D G3DSA:3.20.20.60 259 573 5.3E-113 T 25-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 SMA_RS02525 28ecd05856ad24e1fc3a8449c53d91c4 466 Gene3D G3DSA:2.40.100.10 277 465 2.1E-68 T 25-04-2016 IPR029000 Cyclophilin-like domain SMA_RS02525 28ecd05856ad24e1fc3a8449c53d91c4 466 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 14 261 4.8E-46 T 25-04-2016 IPR000150 Cof protein GO:0016787 SMA_RS02525 28ecd05856ad24e1fc3a8449c53d91c4 466 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 287 463 1.2E-47 T 25-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 SMA_RS02525 28ecd05856ad24e1fc3a8449c53d91c4 466 PANTHER PTHR11071 211 386 8.1E-96 T 25-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 SMA_RS02525 28ecd05856ad24e1fc3a8449c53d91c4 466 PANTHER PTHR11071 411 466 8.1E-96 T 25-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 SMA_RS02525 28ecd05856ad24e1fc3a8449c53d91c4 466 PANTHER PTHR11071:SF282 211 386 8.1E-96 T 25-04-2016 SMA_RS02525 28ecd05856ad24e1fc3a8449c53d91c4 466 PANTHER PTHR11071:SF282 411 466 8.1E-96 T 25-04-2016 SMA_RS02525 28ecd05856ad24e1fc3a8449c53d91c4 466 SUPERFAMILY SSF56784 6 265 2.43E-57 T 25-04-2016 IPR023214 HAD-like domain SMA_RS02525 28ecd05856ad24e1fc3a8449c53d91c4 466 SUPERFAMILY SSF50891 279 385 4.09E-59 T 25-04-2016 IPR029000 Cyclophilin-like domain SMA_RS02525 28ecd05856ad24e1fc3a8449c53d91c4 466 SUPERFAMILY SSF50891 413 464 4.09E-59 T 25-04-2016 IPR029000 Cyclophilin-like domain SMA_RS02525 28ecd05856ad24e1fc3a8449c53d91c4 466 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 367 382 1.0E-19 T 25-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 SMA_RS02525 28ecd05856ad24e1fc3a8449c53d91c4 466 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 299 314 1.0E-19 T 25-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 SMA_RS02525 28ecd05856ad24e1fc3a8449c53d91c4 466 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 325 337 1.0E-19 T 25-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 SMA_RS02525 28ecd05856ad24e1fc3a8449c53d91c4 466 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 14 234 1.1E-17 T 25-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 SMA_RS02525 28ecd05856ad24e1fc3a8449c53d91c4 466 Pfam PF08282 haloacid dehalogenase-like hydrolase 15 261 4.7E-45 T 25-04-2016 IPR023214 HAD-like domain SMA_RS02525 28ecd05856ad24e1fc3a8449c53d91c4 466 Gene3D G3DSA:3.40.50.1000 2 82 7.8E-48 T 25-04-2016 IPR023214 HAD-like domain SMA_RS02525 28ecd05856ad24e1fc3a8449c53d91c4 466 Gene3D G3DSA:3.40.50.1000 170 268 7.8E-48 T 25-04-2016 IPR023214 HAD-like domain SMA_RS08765 c674cd8d1a7325930d659724dcfb5525 343 Gene3D G3DSA:3.20.20.70 3 341 8.0E-105 T 25-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SMA_RS08765 c674cd8d1a7325930d659724dcfb5525 343 SUPERFAMILY SSF51569 3 341 2.2E-94 T 25-04-2016 SMA_RS08765 c674cd8d1a7325930d659724dcfb5525 343 PANTHER PTHR21225 10 341 3.4E-166 T 25-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 SMA_RS08765 c674cd8d1a7325930d659724dcfb5525 343 Pfam PF00793 DAHP synthetase I family 37 333 1.2E-49 T 25-04-2016 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 SMA_RS08765 c674cd8d1a7325930d659724dcfb5525 343 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 13 340 5.1E-78 T 25-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 SMA_RS08765 c674cd8d1a7325930d659724dcfb5525 343 PIRSF PIRSF001361 1 343 1.2E-114 T 25-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 SMA_RS02405 0631e9f92b6a001a6d514d0025ab1799 486 Pfam PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family 154 334 2.0E-8 T 25-04-2016 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 SMA_RS02405 0631e9f92b6a001a6d514d0025ab1799 486 PIRSF PIRSF000484 2 478 2.8E-150 T 25-04-2016 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 SMA_RS02405 0631e9f92b6a001a6d514d0025ab1799 486 Gene3D G3DSA:3.20.140.10 3 383 9.2E-130 T 25-04-2016 SMA_RS02405 0631e9f92b6a001a6d514d0025ab1799 486 PANTHER PTHR11098 9 478 2.4E-202 T 25-04-2016 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 SMA_RS02405 0631e9f92b6a001a6d514d0025ab1799 486 SUPERFAMILY SSF51690 137 476 1.62E-128 T 25-04-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 SMA_RS02405 0631e9f92b6a001a6d514d0025ab1799 486 PANTHER PTHR11098:SF1 9 478 2.4E-202 T 25-04-2016 SMA_RS02405 0631e9f92b6a001a6d514d0025ab1799 486 SUPERFAMILY SSF54675 2 136 9.85E-48 T 25-04-2016 SMA_RS02405 0631e9f92b6a001a6d514d0025ab1799 486 TIGRFAM TIGR01513 NAPRTase_put: nicotinate phosphoribosyltransferase 8 464 1.5E-187 T 25-04-2016 IPR006405 Nicotinate phosphoribosyltransferase pncB-type GO:0004516|GO:0019358 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 SMA_RS06105 388e79abfe4f9fa12dfaae2913759eac 618 PANTHER PTHR21091 1 364 6.6E-91 T 25-04-2016 SMA_RS06105 388e79abfe4f9fa12dfaae2913759eac 618 Gene3D G3DSA:3.20.20.220 327 611 6.8E-60 T 25-04-2016 IPR029041 FAD-linked oxidoreductase-like SMA_RS06105 388e79abfe4f9fa12dfaae2913759eac 618 Pfam PF02574 Homocysteine S-methyltransferase 13 287 5.5E-52 T 25-04-2016 IPR003726 Homocysteine-binding domain SMA_RS06105 388e79abfe4f9fa12dfaae2913759eac 618 PANTHER PTHR21091:SF122 1 364 6.6E-91 T 25-04-2016 SMA_RS06105 388e79abfe4f9fa12dfaae2913759eac 618 SUPERFAMILY SSF51730 323 607 3.73E-68 T 25-04-2016 IPR029041 FAD-linked oxidoreductase-like SMA_RS06105 388e79abfe4f9fa12dfaae2913759eac 618 Gene3D G3DSA:3.20.20.330 1 326 5.4E-91 T 25-04-2016 IPR003726 Homocysteine-binding domain SMA_RS06105 388e79abfe4f9fa12dfaae2913759eac 618 SUPERFAMILY SSF82282 2 366 1.57E-93 T 25-04-2016 IPR003726 Homocysteine-binding domain SMA_RS06105 388e79abfe4f9fa12dfaae2913759eac 618 Pfam PF02219 Methylenetetrahydrofolate reductase 322 591 3.8E-29 T 25-04-2016 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 SMA_RS05335 3e91adf9e4caeba04ddc4b190ba9f98a 288 PANTHER PTHR30570 20 286 2.3E-145 T 25-04-2016 SMA_RS05335 3e91adf9e4caeba04ddc4b190ba9f98a 288 Gene3D G3DSA:3.40.190.10 117 232 1.1E-42 T 25-04-2016 SMA_RS05335 3e91adf9e4caeba04ddc4b190ba9f98a 288 SUPERFAMILY SSF53850 33 280 6.64E-76 T 25-04-2016 SMA_RS05335 3e91adf9e4caeba04ddc4b190ba9f98a 288 TIGRFAM TIGR02136 ptsS_2: phosphate binding protein 4 271 2.3E-92 T 25-04-2016 IPR011862 Phosphate binding protein GO:0006810 SMA_RS05335 3e91adf9e4caeba04ddc4b190ba9f98a 288 PANTHER PTHR30570:SF4 20 286 2.3E-145 T 25-04-2016 SMA_RS05335 3e91adf9e4caeba04ddc4b190ba9f98a 288 Pfam PF12849 PBP superfamily domain 32 258 1.1E-36 T 25-04-2016 IPR024370 PBP domain SMA_RS05335 3e91adf9e4caeba04ddc4b190ba9f98a 288 Gene3D G3DSA:3.40.190.10 233 274 1.8E-13 T 25-04-2016 SMA_RS05335 3e91adf9e4caeba04ddc4b190ba9f98a 288 Gene3D G3DSA:3.40.190.10 4 116 1.8E-13 T 25-04-2016 SMA_RS06750 08a09469f092b4fcf97f4ae132d3fd6b 690 Gene3D G3DSA:3.40.50.300 463 685 1.7E-49 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS06750 08a09469f092b4fcf97f4ae132d3fd6b 690 Pfam PF03412 Peptidase C39 family 2 133 6.2E-36 T 25-04-2016 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 SMA_RS06750 08a09469f092b4fcf97f4ae132d3fd6b 690 SMART SM00382 487 665 1.8E-12 T 25-04-2016 IPR003593 AAA+ ATPase domain SMA_RS06750 08a09469f092b4fcf97f4ae132d3fd6b 690 PANTHER PTHR24221 80 662 1.4E-62 T 25-04-2016 SMA_RS06750 08a09469f092b4fcf97f4ae132d3fd6b 690 SUPERFAMILY SSF52540 462 688 5.43E-43 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS06750 08a09469f092b4fcf97f4ae132d3fd6b 690 Pfam PF00664 ABC transporter transmembrane region 158 420 3.3E-18 T 25-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SMA_RS06750 08a09469f092b4fcf97f4ae132d3fd6b 690 ProSitePatterns PS00211 ABC transporters family signature. 588 602 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SMA_RS06750 08a09469f092b4fcf97f4ae132d3fd6b 690 Gene3D G3DSA:1.20.1560.10 144 445 6.6E-24 T 25-04-2016 SMA_RS06750 08a09469f092b4fcf97f4ae132d3fd6b 690 Gene3D G3DSA:3.90.70.10 7 131 2.9E-9 T 25-04-2016 SMA_RS06750 08a09469f092b4fcf97f4ae132d3fd6b 690 SUPERFAMILY SSF90123 144 445 7.32E-29 T 25-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SMA_RS06750 08a09469f092b4fcf97f4ae132d3fd6b 690 PANTHER PTHR24221:SF161 80 662 1.4E-62 T 25-04-2016 SMA_RS06750 08a09469f092b4fcf97f4ae132d3fd6b 690 Pfam PF00005 ABC transporter 478 615 1.1E-22 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMA_RS07080 bed59c45ee05d34b3ed8ed2fedef30ad 257 Gene3D G3DSA:3.40.50.1000 2 80 2.1E-40 T 25-04-2016 IPR023214 HAD-like domain SMA_RS07080 bed59c45ee05d34b3ed8ed2fedef30ad 257 Gene3D G3DSA:3.40.50.1000 178 252 2.1E-40 T 25-04-2016 IPR023214 HAD-like domain SMA_RS07080 bed59c45ee05d34b3ed8ed2fedef30ad 257 Gene3D G3DSA:3.40.50.10410 85 177 6.7E-37 T 25-04-2016 IPR023215 Nitrophenylphosphatase-like domain SMA_RS07080 bed59c45ee05d34b3ed8ed2fedef30ad 257 SUPERFAMILY SSF56784 3 252 5.15E-73 T 25-04-2016 IPR023214 HAD-like domain SMA_RS07080 bed59c45ee05d34b3ed8ed2fedef30ad 257 PANTHER PTHR19288:SF3 2 252 5.2E-91 T 25-04-2016 SMA_RS07080 bed59c45ee05d34b3ed8ed2fedef30ad 257 PANTHER PTHR19288 2 252 5.2E-91 T 25-04-2016 SMA_RS07080 bed59c45ee05d34b3ed8ed2fedef30ad 257 TIGRFAM TIGR01460 HAD-SF-IIA: HAD hydrolase, family IIA 7 228 1.8E-40 T 25-04-2016 IPR006357 HAD-superfamily hydrolase, subfamily IIA SMA_RS07080 bed59c45ee05d34b3ed8ed2fedef30ad 257 Pfam PF13344 Haloacid dehalogenase-like hydrolase 7 106 3.5E-23 T 25-04-2016 IPR006357 HAD-superfamily hydrolase, subfamily IIA SMA_RS07080 bed59c45ee05d34b3ed8ed2fedef30ad 257 Pfam PF13242 HAD-hyrolase-like 179 251 9.8E-19 T 25-04-2016 SMA_RS07080 bed59c45ee05d34b3ed8ed2fedef30ad 257 TIGRFAM TIGR01457 HAD-SF-IIA-hyp2: HAD hydrolase, TIGR01457 family 3 252 1.2E-116 T 25-04-2016 IPR006354 HAD-superfamily hydrolase, subfamily IIA, hypothetical 1 SMA_RS03405 ebdda4a24e4e272b2f41c897fa728fbc 397 Hamap MF_01106 Arginine biosynthesis bifunctional protein ArgJ [argJ]. 1 397 145.981 T 25-04-2016 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 SMA_RS03405 ebdda4a24e4e272b2f41c897fa728fbc 397 PANTHER PTHR23100:SF0 1 397 2.5E-189 T 25-04-2016 SMA_RS03405 ebdda4a24e4e272b2f41c897fa728fbc 397 ProDom PD004193 ACETYLTRANSFERASE ORNITHINE ARGININE BIOSYNTHESIS ARGJ GLUTAMATE N-ACETYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIFUNCTIONAL 27 397 0.0 T 25-04-2016 SMA_RS03405 ebdda4a24e4e272b2f41c897fa728fbc 397 SUPERFAMILY SSF56266 11 393 6.28E-136 T 25-04-2016 IPR016117 ArgJ-like domain KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 SMA_RS03405 ebdda4a24e4e272b2f41c897fa728fbc 397 Pfam PF01960 ArgJ family 16 397 8.3E-147 T 25-04-2016 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 SMA_RS03405 ebdda4a24e4e272b2f41c897fa728fbc 397 PANTHER PTHR23100 1 397 2.5E-189 T 25-04-2016 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 SMA_RS03405 ebdda4a24e4e272b2f41c897fa728fbc 397 Gene3D G3DSA:3.60.70.12 5 270 3.5E-94 T 25-04-2016 IPR016117 ArgJ-like domain KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 SMA_RS03405 ebdda4a24e4e272b2f41c897fa728fbc 397 TIGRFAM TIGR00120 ArgJ: glutamate N-acetyltransferase/amino-acid acetyltransferase 4 397 7.0E-154 T 25-04-2016 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 SMA_RS00415 96d640f505bdf79035b5f84061b8cb5b 178 PRINTS PR00059 Ribosomal protein L6 signature 99 115 8.4E-29 T 25-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 SMA_RS00415 96d640f505bdf79035b5f84061b8cb5b 178 PRINTS PR00059 Ribosomal protein L6 signature 71 96 8.4E-29 T 25-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 SMA_RS00415 96d640f505bdf79035b5f84061b8cb5b 178 PRINTS PR00059 Ribosomal protein L6 signature 141 162 8.4E-29 T 25-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 SMA_RS00415 96d640f505bdf79035b5f84061b8cb5b 178 Pfam PF00347 Ribosomal protein L6 12 82 6.8E-20 T 25-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 SMA_RS00415 96d640f505bdf79035b5f84061b8cb5b 178 Pfam PF00347 Ribosomal protein L6 91 164 6.1E-19 T 25-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 SMA_RS00415 96d640f505bdf79035b5f84061b8cb5b 178 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 176 3.2E-73 T 25-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 SMA_RS00415 96d640f505bdf79035b5f84061b8cb5b 178 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 154 162 - T 25-04-2016 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS00415 96d640f505bdf79035b5f84061b8cb5b 178 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 176 37.074 T 25-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 SMA_RS00415 96d640f505bdf79035b5f84061b8cb5b 178 Gene3D G3DSA:3.90.930.12 83 177 2.0E-37 T 25-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 SMA_RS00415 96d640f505bdf79035b5f84061b8cb5b 178 Gene3D G3DSA:3.90.930.12 2 82 1.4E-30 T 25-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 SMA_RS00415 96d640f505bdf79035b5f84061b8cb5b 178 SUPERFAMILY SSF56053 83 177 4.45E-35 T 25-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 SMA_RS00415 96d640f505bdf79035b5f84061b8cb5b 178 PANTHER PTHR11655 1 178 2.6E-84 T 25-04-2016 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 SMA_RS00415 96d640f505bdf79035b5f84061b8cb5b 178 PIRSF PIRSF002162 1 177 7.2E-46 T 25-04-2016 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 SMA_RS00415 96d640f505bdf79035b5f84061b8cb5b 178 PANTHER PTHR11655:SF14 1 178 2.6E-84 T 25-04-2016 SMA_RS00415 96d640f505bdf79035b5f84061b8cb5b 178 SUPERFAMILY SSF56053 1 82 3.66E-26 T 25-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 SMA_RS08830 22efaf0465b6867b014c5b0b99484afa 218 SUPERFAMILY SSF103473 92 208 2.35E-5 T 25-04-2016 IPR020846 Major facilitator superfamily domain SMA_RS08830 22efaf0465b6867b014c5b0b99484afa 218 Pfam PF06570 Protein of unknown function (DUF1129) 5 212 5.7E-78 T 25-04-2016 IPR009214 Protein of unknown function DUF1129 SMA_RS08830 22efaf0465b6867b014c5b0b99484afa 218 PIRSF PIRSF033111 1 218 2.1E-96 T 25-04-2016 IPR009214 Protein of unknown function DUF1129 SMA_RS05545 eed8648aba420e0eed9751bcab6293bd 307 Gene3D G3DSA:1.10.10.60 242 292 8.8E-21 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMA_RS05545 eed8648aba420e0eed9751bcab6293bd 307 SUPERFAMILY SSF46689 188 239 1.61E-8 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMA_RS05545 eed8648aba420e0eed9751bcab6293bd 307 SUPERFAMILY SSF46689 241 294 1.08E-15 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMA_RS05545 eed8648aba420e0eed9751bcab6293bd 307 SMART SM00342 205 288 2.8E-28 T 25-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SMA_RS05545 eed8648aba420e0eed9751bcab6293bd 307 Gene3D G3DSA:1.10.10.60 187 241 4.5E-17 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMA_RS05545 eed8648aba420e0eed9751bcab6293bd 307 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 257 272 3.9E-7 T 25-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 SMA_RS05545 eed8648aba420e0eed9751bcab6293bd 307 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 272 288 3.9E-7 T 25-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 SMA_RS05545 eed8648aba420e0eed9751bcab6293bd 307 Gene3D G3DSA:2.60.120.280 15 170 2.4E-14 T 25-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 SMA_RS05545 eed8648aba420e0eed9751bcab6293bd 307 Pfam PF02311 AraC-like ligand binding domain 28 166 3.6E-19 T 25-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 SMA_RS05545 eed8648aba420e0eed9751bcab6293bd 307 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 242 284 - T 25-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 SMA_RS05545 eed8648aba420e0eed9751bcab6293bd 307 SUPERFAMILY SSF51215 37 170 1.7E-13 T 25-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 SMA_RS05545 eed8648aba420e0eed9751bcab6293bd 307 Pfam PF12833 Helix-turn-helix domain 212 290 1.3E-22 T 25-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SMA_RS05545 eed8648aba420e0eed9751bcab6293bd 307 PANTHER PTHR11019 18 124 1.5E-39 T 25-04-2016 SMA_RS05545 eed8648aba420e0eed9751bcab6293bd 307 PANTHER PTHR11019 140 296 1.5E-39 T 25-04-2016 SMA_RS09845 08aaf8a57762fad397882d613a5458ab 316 Gene3D G3DSA:1.20.58.340 243 315 1.8E-15 T 25-04-2016 SMA_RS09845 08aaf8a57762fad397882d613a5458ab 316 SUPERFAMILY SSF143865 69 250 3.01E-7 T 25-04-2016 SMA_RS09845 08aaf8a57762fad397882d613a5458ab 316 SUPERFAMILY SSF144083 252 313 2.22E-12 T 25-04-2016 SMA_RS09845 08aaf8a57762fad397882d613a5458ab 316 Pfam PF01544 CorA-like Mg2+ transporter protein 31 312 8.7E-34 T 25-04-2016 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 SMA_RS08630 4940e75470e2a05da7b9cb3fb57a6e16 212 PANTHER PTHR12039 3 209 7.3E-51 T 25-04-2016 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: REACT_11193|UniPathway: UPA00253 SMA_RS08630 4940e75470e2a05da7b9cb3fb57a6e16 212 SUPERFAMILY SSF52374 24 211 1.63E-49 T 25-04-2016 SMA_RS08630 4940e75470e2a05da7b9cb3fb57a6e16 212 TIGRFAM TIGR00482 TIGR00482: nicotinate (nicotinamide) nucleotide adenylyltransferase 28 209 4.9E-50 T 25-04-2016 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: REACT_11193|UniPathway: UPA00253 SMA_RS08630 4940e75470e2a05da7b9cb3fb57a6e16 212 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 26 89 4.1E-7 T 25-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 SMA_RS08630 4940e75470e2a05da7b9cb3fb57a6e16 212 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 24 210 29.475 T 25-04-2016 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: REACT_11193|UniPathway: UPA00253 SMA_RS08630 4940e75470e2a05da7b9cb3fb57a6e16 212 Gene3D G3DSA:3.40.50.620 22 210 3.6E-62 T 25-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SMA_RS08630 4940e75470e2a05da7b9cb3fb57a6e16 212 Pfam PF01467 Cytidylyltransferase-like 28 183 1.7E-34 T 25-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 SMA_RS07625 6c49641074c55d6662b80b37cf8b67b3 1179 SMART SM00968 518 637 1.4E-39 T 25-04-2016 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 SMA_RS07625 6c49641074c55d6662b80b37cf8b67b3 1179 Hamap MF_01894 Chromosome partition protein Smc [smc]. 1 1173 22.733 T 25-04-2016 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 SMA_RS07625 6c49641074c55d6662b80b37cf8b67b3 1179 Gene3D G3DSA:3.40.50.300 613 666 3.8E-47 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS07625 6c49641074c55d6662b80b37cf8b67b3 1179 Gene3D G3DSA:3.40.50.300 870 975 3.3E-38 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS07625 6c49641074c55d6662b80b37cf8b67b3 1179 Gene3D G3DSA:3.40.50.300 1020 1174 3.3E-38 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS07625 6c49641074c55d6662b80b37cf8b67b3 1179 Gene3D G3DSA:3.40.50.300 270 286 3.8E-47 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS07625 6c49641074c55d6662b80b37cf8b67b3 1179 Gene3D G3DSA:3.40.50.300 1 163 3.8E-47 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS07625 6c49641074c55d6662b80b37cf8b67b3 1179 PIRSF PIRSF005719 1 1178 1.2E-283 T 25-04-2016 IPR024704 Structural maintenance of chromosomes protein SMA_RS07625 6c49641074c55d6662b80b37cf8b67b3 1179 TIGRFAM TIGR02168 SMC_prok_B: chromosome segregation protein SMC 2 1171 0.0 T 25-04-2016 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 SMA_RS07625 6c49641074c55d6662b80b37cf8b67b3 1179 Pfam PF02463 RecF/RecN/SMC N terminal domain 2 1164 8.9E-60 T 25-04-2016 IPR003395 RecF/RecN/SMC, N-terminal SMA_RS07625 6c49641074c55d6662b80b37cf8b67b3 1179 Pfam PF06470 SMC proteins Flexible Hinge Domain 519 636 2.3E-26 T 25-04-2016 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 SMA_RS07625 6c49641074c55d6662b80b37cf8b67b3 1179 SUPERFAMILY SSF75553 484 684 1.28E-50 T 25-04-2016 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 SMA_RS07625 6c49641074c55d6662b80b37cf8b67b3 1179 PANTHER PTHR18937:SF251 509 1179 0.0 T 25-04-2016 SMA_RS07625 6c49641074c55d6662b80b37cf8b67b3 1179 PANTHER PTHR18937:SF251 1 485 0.0 T 25-04-2016 SMA_RS07625 6c49641074c55d6662b80b37cf8b67b3 1179 PANTHER PTHR18937 509 1179 0.0 T 25-04-2016 SMA_RS07625 6c49641074c55d6662b80b37cf8b67b3 1179 PANTHER PTHR18937 1 485 0.0 T 25-04-2016 SMA_RS07625 6c49641074c55d6662b80b37cf8b67b3 1179 SUPERFAMILY SSF52540 1 216 1.45E-53 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS07625 6c49641074c55d6662b80b37cf8b67b3 1179 SUPERFAMILY SSF52540 1070 1156 1.45E-53 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS04000 49f299797b6188c45c25c29045dd5e05 551 PANTHER PTHR15239 402 539 3.4E-123 T 25-04-2016 SMA_RS04000 49f299797b6188c45c25c29045dd5e05 551 PANTHER PTHR15239 1 385 3.4E-123 T 25-04-2016 SMA_RS04000 49f299797b6188c45c25c29045dd5e05 551 Pfam PF05670 Domain of unknown function (DUF814) 433 518 6.8E-26 T 25-04-2016 IPR008532 Domain of unknown function DUF814 SMA_RS04000 49f299797b6188c45c25c29045dd5e05 551 Gene3D G3DSA:3.40.970.40 239 273 1.0E-13 T 25-04-2016 SMA_RS04000 49f299797b6188c45c25c29045dd5e05 551 Gene3D G3DSA:2.30.310.10 1 167 3.4E-62 T 25-04-2016 SMA_RS04000 49f299797b6188c45c25c29045dd5e05 551 Pfam PF05833 Fibronectin-binding protein A N-terminus (FbpA) 4 426 1.0E-148 T 25-04-2016 SMA_RS02095 e10e6b42f4d45afb1206e3d37202a995 123 PIRSF PIRSF021265 1 122 1.3E-53 T 25-04-2016 IPR010360 Protein of unknown function DUF956 SMA_RS02095 e10e6b42f4d45afb1206e3d37202a995 123 Pfam PF06115 Domain of unknown function (DUF956) 1 115 2.7E-44 T 25-04-2016 IPR010360 Protein of unknown function DUF956 SMA_RS03435 782e76a7b1966da7117fe18d7f46986a 320 Gene3D G3DSA:1.10.620.20 5 281 5.7E-86 T 25-04-2016 IPR012348 Ribonucleotide reductase-related GO:0016491|GO:0055114 Reactome: REACT_1698 SMA_RS03435 782e76a7b1966da7117fe18d7f46986a 320 TIGRFAM TIGR04171 RNR_1b_NrdF: ribonucleoside-diphosphate reductase, class 1b, beta subunit 6 317 5.2E-149 T 25-04-2016 IPR026494 Ribonucleoside reductase subunit beta, NrdF GO:0005971|GO:0009263 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 SMA_RS03435 782e76a7b1966da7117fe18d7f46986a 320 Pfam PF00268 Ribonucleotide reductase, small chain 9 279 1.1E-83 T 25-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 SMA_RS03435 782e76a7b1966da7117fe18d7f46986a 320 PIRSF PIRSF000355 1 315 2.6E-72 T 25-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 SMA_RS03435 782e76a7b1966da7117fe18d7f46986a 320 SUPERFAMILY SSF47240 4 317 3.5E-99 T 25-04-2016 IPR009078 Ferritin-like superfamily SMA_RS03435 782e76a7b1966da7117fe18d7f46986a 320 PANTHER PTHR23409 9 319 2.9E-87 T 25-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 SMA_RS01900 add051c7754e85fe00139ebbf29052fb 246 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SMA_RS01900 add051c7754e85fe00139ebbf29052fb 246 Gene3D G3DSA:3.40.50.300 4 242 1.2E-82 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS01900 add051c7754e85fe00139ebbf29052fb 246 PIRSF PIRSF039085 2 246 6.5E-109 T 25-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 SMA_RS01900 add051c7754e85fe00139ebbf29052fb 246 PANTHER PTHR24220 7 246 2.0E-129 T 25-04-2016 SMA_RS01900 add051c7754e85fe00139ebbf29052fb 246 SUPERFAMILY SSF52540 5 240 9.32E-77 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS01900 add051c7754e85fe00139ebbf29052fb 246 Pfam PF00005 ABC transporter 21 170 8.4E-36 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMA_RS01900 add051c7754e85fe00139ebbf29052fb 246 SMART SM00382 30 218 3.4E-14 T 25-04-2016 IPR003593 AAA+ ATPase domain SMA_RS01900 add051c7754e85fe00139ebbf29052fb 246 PANTHER PTHR24220:SF327 7 246 2.0E-129 T 25-04-2016 SMA_RS01930 4171a84cb9bee28cae5fd1b26aeef412 256 TIGRFAM TIGR01978 sufC: FeS assembly ATPase SufC 4 244 4.9E-111 T 25-04-2016 IPR010230 FeS cluster assembly SUF system, ATPase SufC GO:0005524|GO:0006810 SMA_RS01930 4171a84cb9bee28cae5fd1b26aeef412 256 PANTHER PTHR24220 5 255 3.2E-130 T 25-04-2016 SMA_RS01930 4171a84cb9bee28cae5fd1b26aeef412 256 SMART SM00382 28 231 3.3E-8 T 25-04-2016 IPR003593 AAA+ ATPase domain SMA_RS01930 4171a84cb9bee28cae5fd1b26aeef412 256 SUPERFAMILY SSF52540 3 231 1.02E-42 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS01930 4171a84cb9bee28cae5fd1b26aeef412 256 Pfam PF00005 ABC transporter 19 171 3.7E-23 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMA_RS01930 4171a84cb9bee28cae5fd1b26aeef412 256 Gene3D G3DSA:3.40.50.300 3 235 3.0E-46 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS01930 4171a84cb9bee28cae5fd1b26aeef412 256 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SMA_RS01930 4171a84cb9bee28cae5fd1b26aeef412 256 PANTHER PTHR24220:SF85 5 255 3.2E-130 T 25-04-2016 SMA_RS09095 f6f1d06f7a1bf1fdd3ac13f62af9afcf 390 SUPERFAMILY SSF160996 193 335 3.14E-33 T 25-04-2016 SMA_RS09095 f6f1d06f7a1bf1fdd3ac13f62af9afcf 390 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 158 167 2.4E-8 T 25-04-2016 SMA_RS09095 f6f1d06f7a1bf1fdd3ac13f62af9afcf 390 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 2.4E-8 T 25-04-2016 SMA_RS09095 f6f1d06f7a1bf1fdd3ac13f62af9afcf 390 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 357 364 2.4E-8 T 25-04-2016 SMA_RS09095 f6f1d06f7a1bf1fdd3ac13f62af9afcf 390 PANTHER PTHR10617:SF103 1 288 1.1E-117 T 25-04-2016 SMA_RS09095 f6f1d06f7a1bf1fdd3ac13f62af9afcf 390 PANTHER PTHR10617:SF103 325 386 1.1E-117 T 25-04-2016 SMA_RS09095 f6f1d06f7a1bf1fdd3ac13f62af9afcf 390 SUPERFAMILY SSF51905 1 191 5.86E-50 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMA_RS09095 f6f1d06f7a1bf1fdd3ac13f62af9afcf 390 SUPERFAMILY SSF51905 332 386 5.86E-50 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMA_RS09095 f6f1d06f7a1bf1fdd3ac13f62af9afcf 390 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 6 387 2.3E-134 T 25-04-2016 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like SMA_RS09095 f6f1d06f7a1bf1fdd3ac13f62af9afcf 390 PANTHER PTHR10617 1 288 1.1E-117 T 25-04-2016 SMA_RS09095 f6f1d06f7a1bf1fdd3ac13f62af9afcf 390 PANTHER PTHR10617 325 386 1.1E-117 T 25-04-2016 SMA_RS09095 f6f1d06f7a1bf1fdd3ac13f62af9afcf 390 Gene3D G3DSA:1.10.8.260 271 316 9.8E-5 T 25-04-2016 IPR023166 HI0933 insert-like domain SMA_RS09095 f6f1d06f7a1bf1fdd3ac13f62af9afcf 390 Pfam PF03486 HI0933-like protein 4 387 9.8E-142 T 25-04-2016 SMA_RS09095 f6f1d06f7a1bf1fdd3ac13f62af9afcf 390 Gene3D G3DSA:2.40.30.10 192 270 9.9E-25 T 25-04-2016 SMA_RS09095 f6f1d06f7a1bf1fdd3ac13f62af9afcf 390 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 4.3E-8 T 25-04-2016 SMA_RS09095 f6f1d06f7a1bf1fdd3ac13f62af9afcf 390 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 155 173 4.3E-8 T 25-04-2016 SMA_RS09095 f6f1d06f7a1bf1fdd3ac13f62af9afcf 390 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 342 364 4.3E-8 T 25-04-2016 SMA_RS09095 f6f1d06f7a1bf1fdd3ac13f62af9afcf 390 Gene3D G3DSA:3.50.50.60 334 387 6.6E-48 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMA_RS09095 f6f1d06f7a1bf1fdd3ac13f62af9afcf 390 Gene3D G3DSA:3.50.50.60 1 189 6.6E-48 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMA_RS00450 afbaf50b4547b2a94fdd5680c3a075d5 72 PANTHER PTHR33370 2 72 7.6E-46 T 25-04-2016 SMA_RS00450 afbaf50b4547b2a94fdd5680c3a075d5 72 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 5.0E-28 T 25-04-2016 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 SMA_RS00450 afbaf50b4547b2a94fdd5680c3a075d5 72 SUPERFAMILY SSF50249 2 71 4.63E-28 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMA_RS00450 afbaf50b4547b2a94fdd5680c3a075d5 72 Gene3D G3DSA:2.40.50.140 2 72 1.1E-39 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMA_RS00450 afbaf50b4547b2a94fdd5680c3a075d5 72 SMART SM00316 4 72 2.2E-6 T 25-04-2016 IPR022967 RNA-binding domain, S1 SMA_RS00450 afbaf50b4547b2a94fdd5680c3a075d5 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 26.723 T 25-04-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 SMA_RS00450 afbaf50b4547b2a94fdd5680c3a075d5 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 70 3.4E-38 T 25-04-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 SMA_RS08335 c3bbf204076aaee8825585f11f9dd99b 80 PANTHER PTHR41297 2 80 5.9E-22 T 25-04-2016 SMA_RS08335 c3bbf204076aaee8825585f11f9dd99b 80 Hamap MF_00363 UPF0154 protein . 2 72 21.08 T 25-04-2016 IPR005359 Protein with unknown function UPF0154 SMA_RS08335 c3bbf204076aaee8825585f11f9dd99b 80 ProDom PD048972 UPF0154 TRANSMEMBRANE MEMBRANE UNCHARACTERIZED FAMILY YNEF SUPERFAMILY MG335.1 EXPORTED MYCGA5700 1 62 2.0E-17 T 25-04-2016 IPR005359 Protein with unknown function UPF0154 SMA_RS08335 c3bbf204076aaee8825585f11f9dd99b 80 Pfam PF03672 Uncharacterised protein family (UPF0154) 11 68 4.3E-24 T 25-04-2016 IPR005359 Protein with unknown function UPF0154 SMA_RS00885 1b708a04717506fef7ae9d58984f2ff9 267 PANTHER PTHR24220:SF534 5 253 1.1E-108 T 25-04-2016 SMA_RS00885 1b708a04717506fef7ae9d58984f2ff9 267 Gene3D G3DSA:3.40.50.300 3 238 1.2E-56 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS00885 1b708a04717506fef7ae9d58984f2ff9 267 SMART SM00382 33 231 4.5E-11 T 25-04-2016 IPR003593 AAA+ ATPase domain SMA_RS00885 1b708a04717506fef7ae9d58984f2ff9 267 PANTHER PTHR24220 5 253 1.1E-108 T 25-04-2016 SMA_RS00885 1b708a04717506fef7ae9d58984f2ff9 267 Pfam PF00005 ABC transporter 24 180 1.3E-27 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMA_RS00885 1b708a04717506fef7ae9d58984f2ff9 267 SUPERFAMILY SSF52540 2 236 9.78E-52 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS00885 1b708a04717506fef7ae9d58984f2ff9 267 ProSitePatterns PS00211 ABC transporters family signature. 152 166 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SMA_RS06455 7c1e1575cd0712e707a60c9770777948 264 Gene3D G3DSA:3.90.550.10 7 252 3.9E-26 T 25-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SMA_RS06455 7c1e1575cd0712e707a60c9770777948 264 PANTHER PTHR22916 7 137 1.2E-16 T 25-04-2016 SMA_RS06455 7c1e1575cd0712e707a60c9770777948 264 PANTHER PTHR22916 156 256 1.2E-16 T 25-04-2016 SMA_RS06455 7c1e1575cd0712e707a60c9770777948 264 Pfam PF00535 Glycosyl transferase family 2 7 153 2.1E-11 T 25-04-2016 IPR001173 Glycosyltransferase 2-like SMA_RS06455 7c1e1575cd0712e707a60c9770777948 264 SUPERFAMILY SSF53448 7 233 2.36E-28 T 25-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SMA_RS08340 ea3a8815b4c045beeed36c51cdf76c30 51 SUPERFAMILY SSF53098 1 49 9.86E-7 T 25-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMA_RS08340 ea3a8815b4c045beeed36c51cdf76c30 51 Gene3D G3DSA:3.30.420.10 19 50 5.7E-4 T 25-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMA_RS04365 e04bdb42db052099ebcca462dc6c9f20 243 PIRSF PIRSF016557 1 243 5.7E-80 T 25-04-2016 IPR016667 Capsular polysaccharide synthesis, CpsB/CapC GO:0004725|GO:0030145 UniPathway: UPA00934 SMA_RS04365 e04bdb42db052099ebcca462dc6c9f20 243 PANTHER PTHR39181 2 243 6.7E-41 T 25-04-2016 SMA_RS04365 e04bdb42db052099ebcca462dc6c9f20 243 Gene3D G3DSA:3.20.20.140 1 218 4.5E-11 T 25-04-2016 SMA_RS04365 e04bdb42db052099ebcca462dc6c9f20 243 SUPERFAMILY SSF51556 1 238 1.84E-19 T 25-04-2016 IPR032466 Metal-dependent hydrolase SMA_RS04365 e04bdb42db052099ebcca462dc6c9f20 243 PANTHER PTHR39181:SF1 2 243 6.7E-41 T 25-04-2016 SMA_RS07810 e0412258a7e5dc1c25e06f491c555298 298 PANTHER PTHR11649 3 298 1.2E-124 T 25-04-2016 SMA_RS07810 e0412258a7e5dc1c25e06f491c555298 298 Gene3D G3DSA:3.40.50.300 6 187 1.2E-47 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS07810 e0412258a7e5dc1c25e06f491c555298 298 SUPERFAMILY SSF54814 177 294 2.26E-42 T 25-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 SMA_RS07810 e0412258a7e5dc1c25e06f491c555298 298 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 5 164 1.1E-34 T 25-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 SMA_RS07810 e0412258a7e5dc1c25e06f491c555298 298 Hamap MF_00367 GTPase Era [era]. 2 293 38.17 T 25-04-2016 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 SMA_RS07810 e0412258a7e5dc1c25e06f491c555298 298 SUPERFAMILY SSF52540 7 201 5.27E-49 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS07810 e0412258a7e5dc1c25e06f491c555298 298 TIGRFAM TIGR00436 era: GTP-binding protein Era 5 276 6.0E-108 T 25-04-2016 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 SMA_RS07810 e0412258a7e5dc1c25e06f491c555298 298 Pfam PF07650 KH domain 204 282 4.6E-23 T 25-04-2016 IPR004044 K Homology domain, type 2 GO:0003723 SMA_RS07810 e0412258a7e5dc1c25e06f491c555298 298 PANTHER PTHR11649:SF3 3 298 1.2E-124 T 25-04-2016 SMA_RS07810 e0412258a7e5dc1c25e06f491c555298 298 Pfam PF01926 50S ribosome-binding GTPase 7 121 2.7E-24 T 25-04-2016 IPR006073 GTP binding domain GO:0005525 SMA_RS07810 e0412258a7e5dc1c25e06f491c555298 298 Gene3D G3DSA:3.30.300.20 188 288 2.5E-41 T 25-04-2016 IPR015946 K homology domain-like, alpha/beta SMA_RS04565 a001a7fdf32e662e8b82ad6bf4615451 232 SUPERFAMILY SSF52540 4 218 7.72E-49 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS04565 a001a7fdf32e662e8b82ad6bf4615451 232 PANTHER PTHR24220:SF530 6 229 4.7E-88 T 25-04-2016 SMA_RS04565 a001a7fdf32e662e8b82ad6bf4615451 232 Gene3D G3DSA:3.40.50.300 2 224 3.8E-52 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS04565 a001a7fdf32e662e8b82ad6bf4615451 232 Pfam PF00005 ABC transporter 21 155 3.7E-26 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMA_RS04565 a001a7fdf32e662e8b82ad6bf4615451 232 PANTHER PTHR24220 6 229 4.7E-88 T 25-04-2016 SMA_RS04565 a001a7fdf32e662e8b82ad6bf4615451 232 SMART SM00382 29 204 1.7E-9 T 25-04-2016 IPR003593 AAA+ ATPase domain SMA_RS07920 0144a3fbc5d65ec30b69ad4e88c53a47 320 SUPERFAMILY SSF51735 2 153 1.67E-43 T 25-04-2016 IPR016040 NAD(P)-binding domain SMA_RS07920 0144a3fbc5d65ec30b69ad4e88c53a47 320 Gene3D G3DSA:3.30.360.10 143 319 4.7E-53 T 25-04-2016 SMA_RS07920 0144a3fbc5d65ec30b69ad4e88c53a47 320 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 139 202 1.4E-5 T 25-04-2016 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 SMA_RS07920 0144a3fbc5d65ec30b69ad4e88c53a47 320 PANTHER PTHR22604 1 314 1.1E-64 T 25-04-2016 SMA_RS07920 0144a3fbc5d65ec30b69ad4e88c53a47 320 SUPERFAMILY SSF55347 134 286 8.34E-16 T 25-04-2016 SMA_RS07920 0144a3fbc5d65ec30b69ad4e88c53a47 320 Gene3D G3DSA:3.40.50.720 1 142 2.4E-40 T 25-04-2016 IPR016040 NAD(P)-binding domain SMA_RS07920 0144a3fbc5d65ec30b69ad4e88c53a47 320 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 1 118 2.9E-24 T 25-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 SMA_RS07920 0144a3fbc5d65ec30b69ad4e88c53a47 320 PANTHER PTHR22604:SF76 1 314 1.1E-64 T 25-04-2016 SMA_RS03910 e3402a00474369442163a6048a6fa30c 224 Gene3D G3DSA:1.10.10.630 120 196 1.7E-30 T 25-04-2016 IPR006343 Replication protein, DnaD/DnaB domain SMA_RS03910 e3402a00474369442163a6048a6fa30c 224 PANTHER PTHR41274 1 222 1.0E-54 T 25-04-2016 SMA_RS03910 e3402a00474369442163a6048a6fa30c 224 Pfam PF07261 Replication initiation and membrane attachment 126 197 9.5E-25 T 25-04-2016 IPR006343 Replication protein, DnaD/DnaB domain SMA_RS03910 e3402a00474369442163a6048a6fa30c 224 TIGRFAM TIGR01446 DnaD_dom: DnaD domain protein 124 196 6.9E-27 T 25-04-2016 IPR006343 Replication protein, DnaD/DnaB domain SMA_RS03910 e3402a00474369442163a6048a6fa30c 224 SUPERFAMILY SSF158499 124 190 1.09E-19 T 25-04-2016 IPR006343 Replication protein, DnaD/DnaB domain SMA_RS00880 018f2cc0e075418efbf2d860c2f256c6 658 Pfam PF04392 ABC transporter substrate binding protein 34 313 8.0E-85 T 25-04-2016 IPR007487 ABC transporter, substrate-binding protein SMA_RS00880 018f2cc0e075418efbf2d860c2f256c6 658 PANTHER PTHR32196:SF27 303 647 6.9E-82 T 25-04-2016 SMA_RS00880 018f2cc0e075418efbf2d860c2f256c6 658 Gene3D G3DSA:3.40.50.2300 31 158 2.5E-55 T 25-04-2016 SMA_RS00880 018f2cc0e075418efbf2d860c2f256c6 658 SUPERFAMILY SSF53822 40 287 2.75E-13 T 25-04-2016 IPR028082 Periplasmic binding protein-like I SMA_RS00880 018f2cc0e075418efbf2d860c2f256c6 658 PANTHER PTHR32196 303 647 6.9E-82 T 25-04-2016 SMA_RS00880 018f2cc0e075418efbf2d860c2f256c6 658 Pfam PF02653 Branched-chain amino acid transport system / permease component 363 634 1.4E-31 T 25-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 SMA_RS00880 018f2cc0e075418efbf2d860c2f256c6 658 Gene3D G3DSA:3.40.50.2300 159 289 2.3E-50 T 25-04-2016 SMA_RS09690 990c59c9ece628771afd032aedb4c741 163 Pfam PF12687 Protein of unknown function (DUF3801) 28 150 5.8E-6 T 25-04-2016 IPR024234 Protein of unknown function DUF3801 SMA_RS08620 e523adcca7cd9318d755da754e2fd806 117 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 7 104 2.1E-34 T 25-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS SMA_RS08620 e523adcca7cd9318d755da754e2fd806 117 PANTHER PTHR21043 4 111 1.1E-37 T 25-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS SMA_RS08620 e523adcca7cd9318d755da754e2fd806 117 Pfam PF02410 Ribosomal silencing factor during starvation 10 104 1.7E-26 T 25-04-2016 SMA_RS08620 e523adcca7cd9318d755da754e2fd806 117 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 2 105 25.26 T 25-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS SMA_RS08620 e523adcca7cd9318d755da754e2fd806 117 SUPERFAMILY SSF81301 3 114 7.68E-38 T 25-04-2016 SMA_RS08620 e523adcca7cd9318d755da754e2fd806 117 Gene3D G3DSA:3.30.460.10 3 107 1.9E-37 T 25-04-2016 SMA_RS05290 918e5f83c375b5f53363865d80981221 446 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 336 443 5.8E-22 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMA_RS05290 918e5f83c375b5f53363865d80981221 446 PANTHER PTHR24423 1 8 9.2E-70 T 25-04-2016 SMA_RS05290 918e5f83c375b5f53363865d80981221 446 PANTHER PTHR24423 223 444 9.2E-70 T 25-04-2016 SMA_RS05290 918e5f83c375b5f53363865d80981221 446 SUPERFAMILY SSF47384 213 291 3.53E-11 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMA_RS05290 918e5f83c375b5f53363865d80981221 446 Gene3D G3DSA:3.30.565.10 280 445 2.7E-36 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMA_RS05290 918e5f83c375b5f53363865d80981221 446 SMART SM00388 225 292 1.2E-10 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMA_RS05290 918e5f83c375b5f53363865d80981221 446 Gene3D G3DSA:1.10.287.130 220 279 9.4E-12 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMA_RS05290 918e5f83c375b5f53363865d80981221 446 SUPERFAMILY SSF55874 304 443 4.98E-34 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMA_RS05290 918e5f83c375b5f53363865d80981221 446 PRINTS PR00344 Bacterial sensor protein C-terminal signature 390 400 4.0E-12 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMA_RS05290 918e5f83c375b5f53363865d80981221 446 PRINTS PR00344 Bacterial sensor protein C-terminal signature 431 444 4.0E-12 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMA_RS05290 918e5f83c375b5f53363865d80981221 446 PRINTS PR00344 Bacterial sensor protein C-terminal signature 372 386 4.0E-12 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMA_RS05290 918e5f83c375b5f53363865d80981221 446 PRINTS PR00344 Bacterial sensor protein C-terminal signature 407 425 4.0E-12 T 25-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SMA_RS05290 918e5f83c375b5f53363865d80981221 446 Pfam PF00512 His Kinase A (phospho-acceptor) domain 226 292 1.0E-8 T 25-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SMA_RS05290 918e5f83c375b5f53363865d80981221 446 SMART SM00387 335 446 2.3E-30 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMA_RS05290 918e5f83c375b5f53363865d80981221 446 PANTHER PTHR24423:SF546 1 8 9.2E-70 T 25-04-2016 SMA_RS05290 918e5f83c375b5f53363865d80981221 446 PANTHER PTHR24423:SF546 223 444 9.2E-70 T 25-04-2016 SMA_RS06250 78deebc0bdfb50252b3a36d7ca09b0b5 97 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 39 80 8.0E-18 T 25-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS06250 78deebc0bdfb50252b3a36d7ca09b0b5 97 Gene3D G3DSA:2.40.50.100 31 95 3.0E-30 T 25-04-2016 SMA_RS06250 78deebc0bdfb50252b3a36d7ca09b0b5 97 PANTHER PTHR15893 6 96 4.6E-45 T 25-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS06250 78deebc0bdfb50252b3a36d7ca09b0b5 97 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 12 95 26.494 T 25-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS06250 78deebc0bdfb50252b3a36d7ca09b0b5 97 ProSitePatterns PS00831 Ribosomal protein L27 signature. 45 59 - T 25-04-2016 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS06250 78deebc0bdfb50252b3a36d7ca09b0b5 97 TIGRFAM TIGR00062 L27: ribosomal protein bL27 12 92 2.0E-37 T 25-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS06250 78deebc0bdfb50252b3a36d7ca09b0b5 97 PRINTS PR00063 Ribosomal protein L27 signature 40 64 3.1E-36 T 25-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS06250 78deebc0bdfb50252b3a36d7ca09b0b5 97 PRINTS PR00063 Ribosomal protein L27 signature 65 89 3.1E-36 T 25-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS06250 78deebc0bdfb50252b3a36d7ca09b0b5 97 PRINTS PR00063 Ribosomal protein L27 signature 15 39 3.1E-36 T 25-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS06250 78deebc0bdfb50252b3a36d7ca09b0b5 97 SUPERFAMILY SSF110324 13 94 2.48E-31 T 25-04-2016 SMA_RS06250 78deebc0bdfb50252b3a36d7ca09b0b5 97 Pfam PF01016 Ribosomal L27 protein 13 92 1.2E-33 T 25-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS08360 e2e57eb00f719ea23e6fa7ee90e70a10 246 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 29 93 2.3E-7 T 25-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 SMA_RS08360 e2e57eb00f719ea23e6fa7ee90e70a10 246 PANTHER PTHR12029 1 245 1.4E-58 T 25-04-2016 SMA_RS08360 e2e57eb00f719ea23e6fa7ee90e70a10 246 SUPERFAMILY SSF55315 3 92 1.05E-18 T 25-04-2016 IPR029064 50S ribosomal protein L30e-like SMA_RS08360 e2e57eb00f719ea23e6fa7ee90e70a10 246 Gene3D G3DSA:3.30.1330.30 3 92 1.7E-20 T 25-04-2016 IPR029064 50S ribosomal protein L30e-like SMA_RS08360 e2e57eb00f719ea23e6fa7ee90e70a10 246 SMART SM00967 29 95 1.5E-12 T 25-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 SMA_RS08360 e2e57eb00f719ea23e6fa7ee90e70a10 246 Pfam PF00588 SpoU rRNA Methylase family 104 243 2.8E-35 T 25-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 SMA_RS08360 e2e57eb00f719ea23e6fa7ee90e70a10 246 SUPERFAMILY SSF75217 100 245 6.54E-41 T 25-04-2016 IPR029028 Alpha/beta knot methyltransferases SMA_RS08360 e2e57eb00f719ea23e6fa7ee90e70a10 246 Gene3D G3DSA:3.40.1280.10 101 245 8.7E-47 T 25-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal SMA_RS06070 e6fcd3732bb1d6f737f0d77cadee65e3 623 SUPERFAMILY SSF52540 6 238 6.29E-47 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS06070 e6fcd3732bb1d6f737f0d77cadee65e3 623 Gene3D G3DSA:3.40.50.300 6 93 1.7E-43 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS06070 e6fcd3732bb1d6f737f0d77cadee65e3 623 Gene3D G3DSA:3.40.50.300 143 248 1.7E-43 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS06070 e6fcd3732bb1d6f737f0d77cadee65e3 623 Pfam PF00005 ABC transporter 20 184 2.8E-21 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMA_RS06070 e6fcd3732bb1d6f737f0d77cadee65e3 623 Pfam PF00005 ABC transporter 333 466 7.3E-21 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMA_RS06070 e6fcd3732bb1d6f737f0d77cadee65e3 623 Pfam PF12848 ABC transporter 223 291 4.2E-9 T 25-04-2016 IPR032781 ABC-transporter extension domain SMA_RS06070 e6fcd3732bb1d6f737f0d77cadee65e3 623 Gene3D G3DSA:3.40.50.300 317 555 1.6E-49 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS06070 e6fcd3732bb1d6f737f0d77cadee65e3 623 SMART SM00382 28 236 3.5E-9 T 25-04-2016 IPR003593 AAA+ ATPase domain SMA_RS06070 e6fcd3732bb1d6f737f0d77cadee65e3 623 SMART SM00382 341 511 2.8E-7 T 25-04-2016 IPR003593 AAA+ ATPase domain SMA_RS06070 e6fcd3732bb1d6f737f0d77cadee65e3 623 Pfam PF16326 ABC transporter C-terminal domain 554 619 5.6E-16 T 25-04-2016 IPR032524 ABC transporter Uup, C-terminal GO:0003677 SMA_RS06070 e6fcd3732bb1d6f737f0d77cadee65e3 623 SUPERFAMILY SSF52540 308 525 9.5E-45 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS06070 e6fcd3732bb1d6f737f0d77cadee65e3 623 Gene3D G3DSA:3.40.50.300 115 142 9.1E-7 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS06070 e6fcd3732bb1d6f737f0d77cadee65e3 623 PANTHER PTHR19211 1 564 7.4E-196 T 25-04-2016 SMA_RS07720 25aefedd52c81c4c5edc358c9664528c 444 Pfam PF13439 Glycosyltransferase Family 4 15 182 7.3E-29 T 25-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain SMA_RS07720 25aefedd52c81c4c5edc358c9664528c 444 PANTHER PTHR12526:SF363 1 419 1.7E-89 T 25-04-2016 SMA_RS07720 25aefedd52c81c4c5edc358c9664528c 444 SUPERFAMILY SSF53756 1 379 8.37E-74 T 25-04-2016 SMA_RS07720 25aefedd52c81c4c5edc358c9664528c 444 Gene3D G3DSA:3.40.50.2000 174 349 4.3E-27 T 25-04-2016 SMA_RS07720 25aefedd52c81c4c5edc358c9664528c 444 PANTHER PTHR12526 1 419 1.7E-89 T 25-04-2016 SMA_RS07720 25aefedd52c81c4c5edc358c9664528c 444 Pfam PF00534 Glycosyl transferases group 1 195 348 4.0E-30 T 25-04-2016 IPR001296 Glycosyl transferase, family 1 SMA_RS09615 a81a94d46d6dcfbce6e53f03b5e99fbc 322 Pfam PF13676 TIR domain 5 118 5.9E-8 T 25-04-2016 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 SMA_RS09615 a81a94d46d6dcfbce6e53f03b5e99fbc 322 SUPERFAMILY SSF52200 4 107 2.35E-9 T 25-04-2016 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 SMA_RS09615 a81a94d46d6dcfbce6e53f03b5e99fbc 322 Gene3D G3DSA:3.40.50.10140 5 110 4.1E-6 T 25-04-2016 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 SMA_RS04020 229327902855c9802f55c064513d0a6f 545 PANTHER PTHR11014 1 111 7.9E-104 T 25-04-2016 SMA_RS04020 229327902855c9802f55c064513d0a6f 545 PANTHER PTHR11014 483 545 7.9E-104 T 25-04-2016 SMA_RS04020 229327902855c9802f55c064513d0a6f 545 PANTHER PTHR11014 135 346 7.9E-104 T 25-04-2016 SMA_RS04020 229327902855c9802f55c064513d0a6f 545 PANTHER PTHR11014 423 452 7.9E-104 T 25-04-2016 SMA_RS04020 229327902855c9802f55c064513d0a6f 545 SUPERFAMILY SSF53187 12 240 1.2E-23 T 25-04-2016 SMA_RS04020 229327902855c9802f55c064513d0a6f 545 SUPERFAMILY SSF53187 466 541 1.2E-23 T 25-04-2016 SMA_RS04020 229327902855c9802f55c064513d0a6f 545 Gene3D G3DSA:3.40.630.10 426 544 9.6E-35 T 25-04-2016 SMA_RS04020 229327902855c9802f55c064513d0a6f 545 Gene3D G3DSA:3.40.630.10 13 233 9.6E-35 T 25-04-2016 SMA_RS04020 229327902855c9802f55c064513d0a6f 545 PIRSF PIRSF010386 4 545 1.5E-156 T 25-04-2016 IPR012166 Uncharacterised protein family RocB SMA_RS04020 229327902855c9802f55c064513d0a6f 545 PANTHER PTHR11014:SF112 1 111 7.9E-104 T 25-04-2016 SMA_RS04020 229327902855c9802f55c064513d0a6f 545 PANTHER PTHR11014:SF112 483 545 7.9E-104 T 25-04-2016 SMA_RS04020 229327902855c9802f55c064513d0a6f 545 PANTHER PTHR11014:SF112 135 346 7.9E-104 T 25-04-2016 SMA_RS04020 229327902855c9802f55c064513d0a6f 545 PANTHER PTHR11014:SF112 423 452 7.9E-104 T 25-04-2016 SMA_RS08570 b2e51a05ad02f62db303c496d280e78d 381 SUPERFAMILY SSF53187 289 373 6.29E-73 T 25-04-2016 SMA_RS08570 b2e51a05ad02f62db303c496d280e78d 381 SUPERFAMILY SSF53187 3 188 6.29E-73 T 25-04-2016 SMA_RS08570 b2e51a05ad02f62db303c496d280e78d 381 Gene3D G3DSA:3.40.630.10 289 373 3.5E-83 T 25-04-2016 SMA_RS08570 b2e51a05ad02f62db303c496d280e78d 381 Gene3D G3DSA:3.40.630.10 3 169 3.5E-83 T 25-04-2016 SMA_RS08570 b2e51a05ad02f62db303c496d280e78d 381 PANTHER PTHR11014:SF107 5 377 1.6E-138 T 25-04-2016 SMA_RS08570 b2e51a05ad02f62db303c496d280e78d 381 PIRSF PIRSF005962 1 375 6.9E-113 T 25-04-2016 IPR017439 Amidohydrolase GO:0016787 SMA_RS08570 b2e51a05ad02f62db303c496d280e78d 381 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 10 361 4.4E-109 T 25-04-2016 IPR017439 Amidohydrolase GO:0016787 SMA_RS08570 b2e51a05ad02f62db303c496d280e78d 381 SUPERFAMILY SSF55031 177 282 7.59E-29 T 25-04-2016 IPR011650 Peptidase M20, dimerisation domain SMA_RS08570 b2e51a05ad02f62db303c496d280e78d 381 Pfam PF07687 Peptidase dimerisation domain 177 273 9.5E-10 T 25-04-2016 IPR011650 Peptidase M20, dimerisation domain SMA_RS08570 b2e51a05ad02f62db303c496d280e78d 381 Pfam PF01546 Peptidase family M20/M25/M40 65 367 9.6E-27 T 25-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 SMA_RS08570 b2e51a05ad02f62db303c496d280e78d 381 Gene3D G3DSA:3.30.70.360 172 288 6.7E-37 T 25-04-2016 IPR011650 Peptidase M20, dimerisation domain SMA_RS08570 b2e51a05ad02f62db303c496d280e78d 381 PANTHER PTHR11014 5 377 1.6E-138 T 25-04-2016 SMA_RS07270 62fee7bd9f6f7f85e7e38b5fdb4d76a6 230 Pfam PF09335 SNARE associated Golgi protein 84 195 1.3E-12 T 25-04-2016 IPR032816 SNARE associated Golgi protein SMA_RS09060 9ed57df5f31298a2f29668880413ae07 292 Gene3D G3DSA:1.10.3720.10 28 288 2.7E-43 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SMA_RS09060 9ed57df5f31298a2f29668880413ae07 292 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 26 285 3.2E-82 T 25-04-2016 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 SMA_RS09060 9ed57df5f31298a2f29668880413ae07 292 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 93 288 8.8E-26 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SMA_RS09060 9ed57df5f31298a2f29668880413ae07 292 SUPERFAMILY SSF161098 25 279 1.21E-38 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SMA_RS09060 9ed57df5f31298a2f29668880413ae07 292 PANTHER PTHR30425 16 292 2.4E-81 T 25-04-2016 SMA_RS01330 87e718f9cda392c7d7ac3d6d0ce9cdc8 123 Pfam PF02699 Preprotein translocase subunit 4 77 1.8E-20 T 25-04-2016 IPR003849 Preprotein translocase YajC SMA_RS01330 87e718f9cda392c7d7ac3d6d0ce9cdc8 123 PRINTS PR01853 Bacterial YajC preprotein translocase signature 1 19 1.2E-6 T 25-04-2016 IPR003849 Preprotein translocase YajC SMA_RS01330 87e718f9cda392c7d7ac3d6d0ce9cdc8 123 PRINTS PR01853 Bacterial YajC preprotein translocase signature 38 56 1.2E-6 T 25-04-2016 IPR003849 Preprotein translocase YajC SMA_RS01330 87e718f9cda392c7d7ac3d6d0ce9cdc8 123 PANTHER PTHR33909:SF1 1 105 7.5E-21 T 25-04-2016 SMA_RS01330 87e718f9cda392c7d7ac3d6d0ce9cdc8 123 SMART SM01323 1 81 4.8E-27 T 25-04-2016 IPR003849 Preprotein translocase YajC SMA_RS01330 87e718f9cda392c7d7ac3d6d0ce9cdc8 123 PANTHER PTHR33909 1 105 7.5E-21 T 25-04-2016 SMA_RS01330 87e718f9cda392c7d7ac3d6d0ce9cdc8 123 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 1 77 3.0E-16 T 25-04-2016 IPR003849 Preprotein translocase YajC SMA_RS02200 d59299446c38e6fc428a098eaf9231f1 146 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 1 146 20.235 T 25-04-2016 IPR003728 Ribosome maturation factor RimP GO:0042274 SMA_RS02200 d59299446c38e6fc428a098eaf9231f1 146 SUPERFAMILY SSF75420 2 74 4.58E-23 T 25-04-2016 IPR028989 Ribosome maturation factor RimP, N-terminal SMA_RS02200 d59299446c38e6fc428a098eaf9231f1 146 SUPERFAMILY SSF74942 75 145 5.36E-19 T 25-04-2016 IPR028998 Ribosome maturation factor RimP, C-terminal SMA_RS02200 d59299446c38e6fc428a098eaf9231f1 146 Pfam PF02576 Putative ribosome maturation factor RimP 3 142 1.3E-38 T 25-04-2016 IPR003728 Ribosome maturation factor RimP GO:0042274 SMA_RS02200 d59299446c38e6fc428a098eaf9231f1 146 PANTHER PTHR33867 10 145 7.7E-40 T 25-04-2016 SMA_RS02200 d59299446c38e6fc428a098eaf9231f1 146 Gene3D G3DSA:2.30.30.180 78 144 3.8E-29 T 25-04-2016 IPR028998 Ribosome maturation factor RimP, C-terminal SMA_RS02200 d59299446c38e6fc428a098eaf9231f1 146 PANTHER PTHR33867:SF1 10 145 7.7E-40 T 25-04-2016 SMA_RS02200 d59299446c38e6fc428a098eaf9231f1 146 Gene3D G3DSA:3.30.300.70 2 71 2.7E-24 T 25-04-2016 IPR028989 Ribosome maturation factor RimP, N-terminal SMA_RS03005 9d4f7d3622ce1cda3c09143ca1d79eeb 614 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 8 146 2.9E-24 T 25-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 SMA_RS03005 9d4f7d3622ce1cda3c09143ca1d79eeb 614 Gene3D G3DSA:3.30.70.240 405 482 1.8E-33 T 25-04-2016 IPR000640 Translation elongation factor EFG, V domain SMA_RS03005 9d4f7d3622ce1cda3c09143ca1d79eeb 614 Pfam PF03144 Elongation factor Tu domain 2 224 294 5.3E-14 T 25-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 SMA_RS03005 9d4f7d3622ce1cda3c09143ca1d79eeb 614 Gene3D G3DSA:2.40.30.10 210 308 1.2E-26 T 25-04-2016 SMA_RS03005 9d4f7d3622ce1cda3c09143ca1d79eeb 614 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 8 603 1.9E-290 T 25-04-2016 IPR006298 GTP-binding protein TypA GO:0005525 SMA_RS03005 9d4f7d3622ce1cda3c09143ca1d79eeb 614 SUPERFAMILY SSF54980 403 518 8.15E-29 T 25-04-2016 IPR009022 Elongation factor G, III-V domain SMA_RS03005 9d4f7d3622ce1cda3c09143ca1d79eeb 614 SUPERFAMILY SSF54980 307 392 7.91E-15 T 25-04-2016 IPR009022 Elongation factor G, III-V domain SMA_RS03005 9d4f7d3622ce1cda3c09143ca1d79eeb 614 PANTHER PTHR23115 189 596 4.1E-293 T 25-04-2016 SMA_RS03005 9d4f7d3622ce1cda3c09143ca1d79eeb 614 PANTHER PTHR23115 1 173 4.1E-293 T 25-04-2016 SMA_RS03005 9d4f7d3622ce1cda3c09143ca1d79eeb 614 SUPERFAMILY SSF50447 155 304 4.78E-32 T 25-04-2016 IPR009000 Translation protein, beta-barrel domain SMA_RS03005 9d4f7d3622ce1cda3c09143ca1d79eeb 614 SMART SM00838 400 485 6.8E-6 T 25-04-2016 IPR000640 Translation elongation factor EFG, V domain SMA_RS03005 9d4f7d3622ce1cda3c09143ca1d79eeb 614 Gene3D G3DSA:2.40.50.250 488 582 1.8E-39 T 25-04-2016 SMA_RS03005 9d4f7d3622ce1cda3c09143ca1d79eeb 614 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 47 62 - T 25-04-2016 IPR031157 Tr-type G domain, conserved site SMA_RS03005 9d4f7d3622ce1cda3c09143ca1d79eeb 614 Pfam PF00009 Elongation factor Tu GTP binding domain 7 200 2.0E-55 T 25-04-2016 SMA_RS03005 9d4f7d3622ce1cda3c09143ca1d79eeb 614 PANTHER PTHR23115:SF14 189 596 4.1E-293 T 25-04-2016 IPR006298 GTP-binding protein TypA GO:0005525 SMA_RS03005 9d4f7d3622ce1cda3c09143ca1d79eeb 614 PANTHER PTHR23115:SF14 1 173 4.1E-293 T 25-04-2016 IPR006298 GTP-binding protein TypA GO:0005525 SMA_RS03005 9d4f7d3622ce1cda3c09143ca1d79eeb 614 Gene3D G3DSA:3.30.70.870 309 404 5.3E-38 T 25-04-2016 SMA_RS03005 9d4f7d3622ce1cda3c09143ca1d79eeb 614 Pfam PF00679 Elongation factor G C-terminus 401 480 2.0E-24 T 25-04-2016 IPR000640 Translation elongation factor EFG, V domain SMA_RS03005 9d4f7d3622ce1cda3c09143ca1d79eeb 614 Gene3D G3DSA:3.40.50.300 4 209 1.0E-63 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS03005 9d4f7d3622ce1cda3c09143ca1d79eeb 614 SUPERFAMILY SSF52540 3 211 9.93E-56 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS03005 9d4f7d3622ce1cda3c09143ca1d79eeb 614 PRINTS PR00315 GTP-binding elongation factor signature 74 84 1.8E-14 T 25-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SMA_RS03005 9d4f7d3622ce1cda3c09143ca1d79eeb 614 PRINTS PR00315 GTP-binding elongation factor signature 10 23 1.8E-14 T 25-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SMA_RS03005 9d4f7d3622ce1cda3c09143ca1d79eeb 614 PRINTS PR00315 GTP-binding elongation factor signature 126 135 1.8E-14 T 25-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SMA_RS03005 9d4f7d3622ce1cda3c09143ca1d79eeb 614 PRINTS PR00315 GTP-binding elongation factor signature 54 62 1.8E-14 T 25-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SMA_RS03005 9d4f7d3622ce1cda3c09143ca1d79eeb 614 PRINTS PR00315 GTP-binding elongation factor signature 90 101 1.8E-14 T 25-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SMA_RS07580 2931b1030512685ded6f1525e83e5b91 300 PANTHER PTHR34184 1 300 2.4E-109 T 25-04-2016 SMA_RS07580 2931b1030512685ded6f1525e83e5b91 300 Pfam PF03773 Predicted permease 13 297 7.8E-66 T 25-04-2016 IPR005524 Predicted permease DUF318 SMA_RS07580 2931b1030512685ded6f1525e83e5b91 300 PANTHER PTHR34184:SF1 1 300 2.4E-109 T 25-04-2016 SMA_RS01445 4ea9b559e3982dda8ed44408e74c1161 170 PANTHER PTHR34547 5 157 6.0E-43 T 25-04-2016 SMA_RS01445 4ea9b559e3982dda8ed44408e74c1161 170 Pfam PF05991 YacP-like NYN domain 6 166 1.8E-50 T 25-04-2016 IPR010298 Protein of unknown function DUF901 SMA_RS07735 2476c112b901b375305419b1725d4f4e 361 Gene3D G3DSA:3.90.230.10 133 356 1.6E-79 T 25-04-2016 IPR000994 Peptidase M24, structural domain SMA_RS07735 2476c112b901b375305419b1725d4f4e 361 PANTHER PTHR10804:SF106 1 360 2.7E-178 T 25-04-2016 SMA_RS07735 2476c112b901b375305419b1725d4f4e 361 SUPERFAMILY SSF53092 2 131 1.48E-22 T 25-04-2016 IPR028980 Creatinase/Aminopeptidase P, N-terminal SMA_RS07735 2476c112b901b375305419b1725d4f4e 361 SUPERFAMILY SSF55920 132 358 5.23E-77 T 25-04-2016 IPR000994 Peptidase M24, structural domain SMA_RS07735 2476c112b901b375305419b1725d4f4e 361 Gene3D G3DSA:3.40.350.10 3 131 3.4E-24 T 25-04-2016 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal SMA_RS07735 2476c112b901b375305419b1725d4f4e 361 PANTHER PTHR10804 1 360 2.7E-178 T 25-04-2016 SMA_RS07735 2476c112b901b375305419b1725d4f4e 361 Pfam PF00557 Metallopeptidase family M24 140 343 3.5E-58 T 25-04-2016 IPR000994 Peptidase M24, structural domain SMA_RS07735 2476c112b901b375305419b1725d4f4e 361 Pfam PF01321 Creatinase/Prolidase N-terminal domain 10 133 4.5E-16 T 25-04-2016 IPR000587 Creatinase, N-terminal GO:0016787 SMA_RS05260 c8e772a305111d344588593ae8a69406 512 PANTHER PTHR24220:SF239 8 385 5.1E-197 T 25-04-2016 SMA_RS05260 c8e772a305111d344588593ae8a69406 512 ProSitePatterns PS00211 ABC transporters family signature. 405 419 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SMA_RS05260 c8e772a305111d344588593ae8a69406 512 Gene3D G3DSA:3.40.50.300 3 238 3.8E-63 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS05260 c8e772a305111d344588593ae8a69406 512 Gene3D G3DSA:3.40.50.300 255 495 3.0E-47 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS05260 c8e772a305111d344588593ae8a69406 512 SMART SM00382 285 475 7.9 T 25-04-2016 IPR003593 AAA+ ATPase domain SMA_RS05260 c8e772a305111d344588593ae8a69406 512 SMART SM00382 31 220 9.8E-15 T 25-04-2016 IPR003593 AAA+ ATPase domain SMA_RS05260 c8e772a305111d344588593ae8a69406 512 SUPERFAMILY SSF52540 258 490 8.79E-45 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS05260 c8e772a305111d344588593ae8a69406 512 PANTHER PTHR24220 8 385 5.1E-197 T 25-04-2016 SMA_RS05260 c8e772a305111d344588593ae8a69406 512 SUPERFAMILY SSF52540 5 229 3.37E-59 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS05260 c8e772a305111d344588593ae8a69406 512 Pfam PF00005 ABC transporter 277 432 8.7E-19 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMA_RS05260 c8e772a305111d344588593ae8a69406 512 Pfam PF00005 ABC transporter 23 172 5.7E-29 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMA_RS02665 cc00cd172ce7786d2f670156abfd4045 217 Pfam PF13545 Crp-like helix-turn-helix domain 148 216 1.9E-16 T 25-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 SMA_RS02665 cc00cd172ce7786d2f670156abfd4045 217 Gene3D G3DSA:1.10.10.10 146 215 1.5E-16 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMA_RS02665 cc00cd172ce7786d2f670156abfd4045 217 SUPERFAMILY SSF46785 146 216 5.04E-15 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMA_RS02665 cc00cd172ce7786d2f670156abfd4045 217 Pfam PF00027 Cyclic nucleotide-binding domain 31 115 5.8E-12 T 25-04-2016 IPR000595 Cyclic nucleotide-binding domain SMA_RS02665 cc00cd172ce7786d2f670156abfd4045 217 PANTHER PTHR24567 9 217 6.7E-36 T 25-04-2016 SMA_RS02665 cc00cd172ce7786d2f670156abfd4045 217 SMART SM00100 12 131 8.8E-11 T 25-04-2016 IPR000595 Cyclic nucleotide-binding domain SMA_RS02665 cc00cd172ce7786d2f670156abfd4045 217 SMART SM00419 162 210 2.0E-9 T 25-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 SMA_RS02665 cc00cd172ce7786d2f670156abfd4045 217 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 168 184 9.8E-5 T 25-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 SMA_RS02665 cc00cd172ce7786d2f670156abfd4045 217 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 184 199 9.8E-5 T 25-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 SMA_RS02665 cc00cd172ce7786d2f670156abfd4045 217 Gene3D G3DSA:2.60.120.10 10 142 1.1E-26 T 25-04-2016 IPR014710 RmlC-like jelly roll fold SMA_RS02665 cc00cd172ce7786d2f670156abfd4045 217 SUPERFAMILY SSF51206 10 141 3.54E-26 T 25-04-2016 IPR018490 Cyclic nucleotide-binding-like SMA_RS10185 55c941783eb520308a525cb18fcbfb75 647 Pfam PF08676 MutL C terminal dimerisation domain 449 591 4.0E-38 T 25-04-2016 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 SMA_RS10185 55c941783eb520308a525cb18fcbfb75 647 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 2 631 27.273 T 25-04-2016 IPR020667 DNA mismatch repair protein, MutL GO:0006298 SMA_RS10185 55c941783eb520308a525cb18fcbfb75 647 SUPERFAMILY SSF118116 445 633 1.12E-49 T 25-04-2016 SMA_RS10185 55c941783eb520308a525cb18fcbfb75 647 SUPERFAMILY SSF54211 191 327 2.84E-35 T 25-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SMA_RS10185 55c941783eb520308a525cb18fcbfb75 647 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 3 307 3.2E-101 T 25-04-2016 IPR002099 DNA mismatch repair protein family GO:0005524|GO:0006298|GO:0030983 SMA_RS10185 55c941783eb520308a525cb18fcbfb75 647 SMART SM00853 449 591 9.6E-43 T 25-04-2016 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 SMA_RS10185 55c941783eb520308a525cb18fcbfb75 647 SMART SM01340 209 327 1.2E-50 T 25-04-2016 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 SMA_RS10185 55c941783eb520308a525cb18fcbfb75 647 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 209 326 2.5E-35 T 25-04-2016 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 SMA_RS10185 55c941783eb520308a525cb18fcbfb75 647 Gene3D G3DSA:3.30.230.10 203 326 5.0E-36 T 25-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SMA_RS10185 55c941783eb520308a525cb18fcbfb75 647 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 25 121 1.1E-10 T 25-04-2016 SMA_RS10185 55c941783eb520308a525cb18fcbfb75 647 SUPERFAMILY SSF55874 3 214 6.42E-54 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMA_RS10185 55c941783eb520308a525cb18fcbfb75 647 PANTHER PTHR10073 4 647 2.7E-163 T 25-04-2016 SMA_RS10185 55c941783eb520308a525cb18fcbfb75 647 Gene3D G3DSA:3.30.565.10 3 202 5.6E-74 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMA_RS05370 124ea8593cd46ebad909dadec4ebb2d0 185 PANTHER PTHR30037:SF4 8 185 6.5E-89 T 25-04-2016 SMA_RS05370 124ea8593cd46ebad909dadec4ebb2d0 185 Pfam PF03352 Methyladenine glycosylase 9 182 1.8E-72 T 25-04-2016 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 SMA_RS05370 124ea8593cd46ebad909dadec4ebb2d0 185 PANTHER PTHR30037 8 185 6.5E-89 T 25-04-2016 SMA_RS05370 124ea8593cd46ebad909dadec4ebb2d0 185 Gene3D G3DSA:1.10.340.30 8 184 6.8E-73 T 25-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 SMA_RS05370 124ea8593cd46ebad909dadec4ebb2d0 185 SUPERFAMILY SSF48150 8 184 3.92E-69 T 25-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 SMA_RS00495 9c974f9e89903c0215bead8e988670ba 174 Pfam PF13936 Helix-turn-helix domain 11 52 6.2E-14 T 25-04-2016 IPR025246 Transposase IS30-like HTH domain SMA_RS00495 9c974f9e89903c0215bead8e988670ba 174 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 59 103 1.4E-6 T 25-04-2016 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger SMA_RS00495 9c974f9e89903c0215bead8e988670ba 174 Gene3D G3DSA:1.10.10.60 14 57 5.4E-5 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMA_RS00495 9c974f9e89903c0215bead8e988670ba 174 PANTHER PTHR33498 14 174 7.7E-13 T 25-04-2016 SMA_RS00495 9c974f9e89903c0215bead8e988670ba 174 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 111 160 2.3E-11 T 25-04-2016 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain SMA_RS00495 9c974f9e89903c0215bead8e988670ba 174 Gene3D G3DSA:1.10.10.60 126 159 1.3E-4 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMA_RS00495 9c974f9e89903c0215bead8e988670ba 174 PANTHER PTHR33498:SF1 14 174 7.7E-13 T 25-04-2016 SMA_RS00035 336d9bc24c9a632eb7f022784385b92b 1165 Pfam PF00270 DEAD/DEAH box helicase 613 772 9.1E-19 T 25-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 SMA_RS00035 336d9bc24c9a632eb7f022784385b92b 1165 Pfam PF03461 TRCF domain 1013 1100 5.1E-24 T 25-04-2016 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 SMA_RS00035 336d9bc24c9a632eb7f022784385b92b 1165 SUPERFAMILY SSF52540 790 996 4.38E-46 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS00035 336d9bc24c9a632eb7f022784385b92b 1165 SUPERFAMILY SSF141259 478 556 3.53E-23 T 25-04-2016 IPR003711 CarD-like/TRCF domain SMA_RS00035 336d9bc24c9a632eb7f022784385b92b 1165 SUPERFAMILY SSF52540 533 791 1.13E-62 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS00035 336d9bc24c9a632eb7f022784385b92b 1165 SMART SM01058 487 584 1.3E-43 T 25-04-2016 IPR003711 CarD-like/TRCF domain SMA_RS00035 336d9bc24c9a632eb7f022784385b92b 1165 SUPERFAMILY SSF52540 14 359 9.2E-78 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS00035 336d9bc24c9a632eb7f022784385b92b 1165 Pfam PF02559 CarD-like/TRCF domain 488 583 1.4E-26 T 25-04-2016 IPR003711 CarD-like/TRCF domain SMA_RS00035 336d9bc24c9a632eb7f022784385b92b 1165 SMART SM00982 1012 1112 4.1E-31 T 25-04-2016 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 SMA_RS00035 336d9bc24c9a632eb7f022784385b92b 1165 PANTHER PTHR14025 397 1163 0.0 T 25-04-2016 SMA_RS00035 336d9bc24c9a632eb7f022784385b92b 1165 PANTHER PTHR14025:SF21 397 1163 0.0 T 25-04-2016 SMA_RS00035 336d9bc24c9a632eb7f022784385b92b 1165 SUPERFAMILY SSF52540 367 477 1.72E-25 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS00035 336d9bc24c9a632eb7f022784385b92b 1165 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 156 1079 0.0 T 25-04-2016 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 SMA_RS00035 336d9bc24c9a632eb7f022784385b92b 1165 Pfam PF00271 Helicase conserved C-terminal domain 813 917 7.0E-16 T 25-04-2016 IPR001650 Helicase, C-terminal SMA_RS00035 336d9bc24c9a632eb7f022784385b92b 1165 Gene3D G3DSA:3.40.50.300 596 794 3.4E-58 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS00035 336d9bc24c9a632eb7f022784385b92b 1165 Gene3D G3DSA:3.40.50.300 809 964 7.3E-35 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS00035 336d9bc24c9a632eb7f022784385b92b 1165 SMART SM00487 608 798 8.7E-37 T 25-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain SMA_RS00035 336d9bc24c9a632eb7f022784385b92b 1165 Gene3D G3DSA:3.30.2060.10 140 218 3.0E-18 T 25-04-2016 SMA_RS00035 336d9bc24c9a632eb7f022784385b92b 1165 SMART SM00490 834 918 1.5E-17 T 25-04-2016 IPR001650 Helicase, C-terminal SMA_RS00035 336d9bc24c9a632eb7f022784385b92b 1165 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 37 1150 28.486 T 25-04-2016 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 SMA_RS00035 336d9bc24c9a632eb7f022784385b92b 1165 SUPERFAMILY SSF143517 1000 1157 1.06E-32 T 25-04-2016 SMA_RS02055 bfb1a841623a4c956be6a4f92e25da02 244 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 8 241 8.8E-97 T 25-04-2016 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00040+1.1.1.10|KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 SMA_RS02055 bfb1a841623a4c956be6a4f92e25da02 244 PANTHER PTHR24322 153 185 3.4E-61 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMA_RS02055 bfb1a841623a4c956be6a4f92e25da02 244 PANTHER PTHR24322 10 137 3.4E-61 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMA_RS02055 bfb1a841623a4c956be6a4f92e25da02 244 Gene3D G3DSA:3.40.50.720 2 243 3.1E-87 T 25-04-2016 IPR016040 NAD(P)-binding domain SMA_RS02055 bfb1a841623a4c956be6a4f92e25da02 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 1.1E-46 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMA_RS02055 bfb1a841623a4c956be6a4f92e25da02 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 1.1E-46 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMA_RS02055 bfb1a841623a4c956be6a4f92e25da02 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 227 1.1E-46 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMA_RS02055 bfb1a841623a4c956be6a4f92e25da02 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 1.1E-46 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMA_RS02055 bfb1a841623a4c956be6a4f92e25da02 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 1.1E-46 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMA_RS02055 bfb1a841623a4c956be6a4f92e25da02 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 1.1E-46 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMA_RS02055 bfb1a841623a4c956be6a4f92e25da02 244 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 25-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 SMA_RS02055 bfb1a841623a4c956be6a4f92e25da02 244 SUPERFAMILY SSF51735 4 243 1.47E-82 T 25-04-2016 IPR016040 NAD(P)-binding domain SMA_RS02055 bfb1a841623a4c956be6a4f92e25da02 244 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 242 6.4E-64 T 25-04-2016 SMA_RS02055 bfb1a841623a4c956be6a4f92e25da02 244 PANTHER PTHR24322:SF328 153 185 3.4E-61 T 25-04-2016 SMA_RS02055 bfb1a841623a4c956be6a4f92e25da02 244 PANTHER PTHR24322:SF328 10 137 3.4E-61 T 25-04-2016 SMA_RS02055 bfb1a841623a4c956be6a4f92e25da02 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 4.9E-17 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMA_RS02055 bfb1a841623a4c956be6a4f92e25da02 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 4.9E-17 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMA_RS02055 bfb1a841623a4c956be6a4f92e25da02 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 4.9E-17 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMA_RS02055 bfb1a841623a4c956be6a4f92e25da02 244 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 184 3.5E-7 T 25-04-2016 SMA_RS08050 e0392668c5b2c5d3b3940c03dace04e7 106 PIRSF PIRSF021439 1 106 1.4E-36 T 25-04-2016 IPR010377 Initiation control protein YabA GO:0006260 SMA_RS08050 e0392668c5b2c5d3b3940c03dace04e7 106 Pfam PF06156 Protein of unknown function (DUF972) 2 101 2.7E-32 T 25-04-2016 IPR010377 Initiation control protein YabA GO:0006260 SMA_RS08050 e0392668c5b2c5d3b3940c03dace04e7 106 PANTHER PTHR41240 2 106 1.9E-31 T 25-04-2016 SMA_RS08050 e0392668c5b2c5d3b3940c03dace04e7 106 Hamap MF_01159 Initiation-control protein YabA. 1 105 22.616 T 25-04-2016 IPR010377 Initiation control protein YabA GO:0006260 SMA_RS04370 e0b64630da815826e0f1e52fb99c06c5 229 PANTHER PTHR32309 7 227 3.2E-19 T 25-04-2016 SMA_RS04370 e0b64630da815826e0f1e52fb99c06c5 229 TIGRFAM TIGR01006 polys_exp_MPA1: polysaccharide export protein, MPA1 family 5 228 3.0E-89 T 25-04-2016 IPR005701 Polysaccharide export protein MPA1-like GO:0006859|GO:0015542|GO:0016021 SMA_RS04370 e0b64630da815826e0f1e52fb99c06c5 229 Pfam PF02706 Chain length determinant protein 10 144 4.4E-32 T 25-04-2016 IPR003856 Lipopolysaccharide biosynthesis GO:0009103|GO:0016020 SMA_RS10110 bec6ac1349ff8be763eadbd913704dde 204 PANTHER PTHR30352 9 204 3.5E-103 T 25-04-2016 SMA_RS10110 bec6ac1349ff8be763eadbd913704dde 204 PIRSF PIRSF000368 14 188 9.4E-73 T 25-04-2016 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic GO:0005737|GO:0043365|GO:0051539|GO:0055114 KEGG: 00351+1.97.1.-|KEGG: 00361+1.97.1.-|KEGG: 00363+1.97.1.-|KEGG: 00625+1.97.1.- SMA_RS10110 bec6ac1349ff8be763eadbd913704dde 204 TIGRFAM TIGR02491 NrdG: anaerobic ribonucleoside-triphosphate reductase activating protein 24 173 1.8E-60 T 25-04-2016 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic GO:0005737|GO:0043365|GO:0051539|GO:0055114 KEGG: 00351+1.97.1.-|KEGG: 00361+1.97.1.-|KEGG: 00363+1.97.1.-|KEGG: 00625+1.97.1.- SMA_RS10110 bec6ac1349ff8be763eadbd913704dde 204 SUPERFAMILY SSF102114 45 119 1.55E-8 T 25-04-2016 SMA_RS10110 bec6ac1349ff8be763eadbd913704dde 204 PANTHER PTHR30352:SF2 9 204 3.5E-103 T 25-04-2016 SMA_RS10110 bec6ac1349ff8be763eadbd913704dde 204 Gene3D G3DSA:3.80.30.10 86 199 7.4E-16 T 25-04-2016 SMA_RS10110 bec6ac1349ff8be763eadbd913704dde 204 Pfam PF13353 4Fe-4S single cluster domain 33 171 2.6E-53 T 25-04-2016 SMA_RS09460 2dc4f9e01060a335847096c74e7e10fc 464 SUPERFAMILY SSF52540 80 355 1.59E-83 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS09460 2dc4f9e01060a335847096c74e7e10fc 464 PANTHER PTHR15184 6 464 7.9E-279 T 25-04-2016 SMA_RS09460 2dc4f9e01060a335847096c74e7e10fc 464 PIRSF PIRSF039114 1 464 2.2E-247 T 25-04-2016 IPR022879 V-type ATP synthase regulatory subunit B/beta SMA_RS09460 2dc4f9e01060a335847096c74e7e10fc 464 PANTHER PTHR15184:SF11 6 464 7.9E-279 T 25-04-2016 SMA_RS09460 2dc4f9e01060a335847096c74e7e10fc 464 Hamap MF_00310 V-type ATP synthase beta chain [atpB]. 4 460 60.118 T 25-04-2016 IPR022879 V-type ATP synthase regulatory subunit B/beta SMA_RS09460 2dc4f9e01060a335847096c74e7e10fc 464 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 133 351 8.6E-67 T 25-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SMA_RS09460 2dc4f9e01060a335847096c74e7e10fc 464 Gene3D G3DSA:3.40.50.300 78 355 4.6E-102 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS09460 2dc4f9e01060a335847096c74e7e10fc 464 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 11 76 8.4E-13 T 25-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SMA_RS09460 2dc4f9e01060a335847096c74e7e10fc 464 Gene3D G3DSA:1.10.1140.10 366 427 3.5E-4 T 25-04-2016 IPR024034 ATPase, F1 complex beta subunit/V1 complex, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SMA_RS09460 2dc4f9e01060a335847096c74e7e10fc 464 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 342 351 - T 25-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SMA_RS02735 384c53831aae8ab144ab4fd5146ceeb1 212 PANTHER PTHR10513 1 193 1.3E-55 T 25-04-2016 SMA_RS02735 384c53831aae8ab144ab4fd5146ceeb1 212 PIRSF PIRSF000705 1 209 4.8E-54 T 25-04-2016 IPR002624 Deoxynucleoside kinase GO:0005524|GO:0006139|GO:0019206 SMA_RS02735 384c53831aae8ab144ab4fd5146ceeb1 212 Gene3D G3DSA:3.40.50.300 1 187 1.4E-53 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS02735 384c53831aae8ab144ab4fd5146ceeb1 212 PANTHER PTHR10513:SF17 1 193 1.3E-55 T 25-04-2016 SMA_RS02735 384c53831aae8ab144ab4fd5146ceeb1 212 Pfam PF01712 Deoxynucleoside kinase 2 200 3.8E-55 T 25-04-2016 IPR031314 Deoxynucleoside kinase domain SMA_RS02735 384c53831aae8ab144ab4fd5146ceeb1 212 SUPERFAMILY SSF52540 1 194 4.63E-43 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS01290 671e295cc0b0dd8b22bcec287c5fa8d3 277 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 93 271 1.8E-26 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SMA_RS01290 671e295cc0b0dd8b22bcec287c5fa8d3 277 Gene3D G3DSA:1.10.3720.10 2 265 9.1E-52 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SMA_RS01290 671e295cc0b0dd8b22bcec287c5fa8d3 277 PANTHER PTHR32243:SF24 1 277 3.4E-124 T 25-04-2016 SMA_RS01290 671e295cc0b0dd8b22bcec287c5fa8d3 277 SUPERFAMILY SSF161098 4 277 2.99E-58 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SMA_RS01290 671e295cc0b0dd8b22bcec287c5fa8d3 277 PANTHER PTHR32243 1 277 3.4E-124 T 25-04-2016 SMA_RS01175 5558755aa70a47698308a8487a7cd259 282 Pfam PF13556 PucR C-terminal helix-turn-helix domain 231 277 4.1E-11 T 25-04-2016 IPR025736 PucR C-terminal helix-turn-helix domain SMA_RS01175 5558755aa70a47698308a8487a7cd259 282 SUPERFAMILY SSF46689 213 260 2.44E-8 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMA_RS01175 5558755aa70a47698308a8487a7cd259 282 Gene3D G3DSA:1.10.10.60 232 259 2.8E-8 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMA_RS06135 6cf9196bf2315f3579b0b75b90b717a0 170 Pfam PF04229 GrpB protein 6 166 1.5E-49 T 25-04-2016 IPR007344 GrpB/Dephospho-CoA kinase SMA_RS06135 6cf9196bf2315f3579b0b75b90b717a0 170 SUPERFAMILY SSF81301 8 167 1.36E-47 T 25-04-2016 SMA_RS06135 6cf9196bf2315f3579b0b75b90b717a0 170 Gene3D G3DSA:3.30.460.10 3 169 1.5E-53 T 25-04-2016 SMA_RS06135 6cf9196bf2315f3579b0b75b90b717a0 170 PANTHER PTHR34822 5 167 1.3E-46 T 25-04-2016 SMA_RS06580 f428c6033a378df030ed7e6f019cecb5 154 Gene3D G3DSA:3.90.79.10 3 153 1.6E-27 T 25-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SMA_RS06580 f428c6033a378df030ed7e6f019cecb5 154 PANTHER PTHR22769:SF30 7 154 2.2E-25 T 25-04-2016 SMA_RS06580 f428c6033a378df030ed7e6f019cecb5 154 Pfam PF00293 NUDIX domain 13 129 1.9E-16 T 25-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 SMA_RS06580 f428c6033a378df030ed7e6f019cecb5 154 PANTHER PTHR22769 7 154 2.2E-25 T 25-04-2016 SMA_RS06580 f428c6033a378df030ed7e6f019cecb5 154 SUPERFAMILY SSF55811 2 140 7.31E-27 T 25-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SMA_RS06580 f428c6033a378df030ed7e6f019cecb5 154 PRINTS PR00502 NUDIX hydrolase family signature 51 66 7.4E-5 T 25-04-2016 IPR020476 NUDIX hydrolase SMA_RS06580 f428c6033a378df030ed7e6f019cecb5 154 PRINTS PR00502 NUDIX hydrolase family signature 37 51 7.4E-5 T 25-04-2016 IPR020476 NUDIX hydrolase SMA_RS00300 db4e159dc797ebcaca3af0530c626f72 494 Gene3D G3DSA:3.90.1380.10 4 85 2.8E-26 T 25-04-2016 IPR029144 Threonine synthase, N-terminal SMA_RS00300 db4e159dc797ebcaca3af0530c626f72 494 Pfam PF14821 Threonine synthase N terminus 5 80 1.9E-21 T 25-04-2016 IPR029144 Threonine synthase, N-terminal SMA_RS00300 db4e159dc797ebcaca3af0530c626f72 494 PANTHER PTHR10314:SF1 373 446 1.4E-124 T 25-04-2016 SMA_RS00300 db4e159dc797ebcaca3af0530c626f72 494 PANTHER PTHR10314:SF1 54 343 1.4E-124 T 25-04-2016 SMA_RS00300 db4e159dc797ebcaca3af0530c626f72 494 PANTHER PTHR10314:SF1 27 38 1.4E-124 T 25-04-2016 SMA_RS00300 db4e159dc797ebcaca3af0530c626f72 494 SUPERFAMILY SSF53686 3 491 1.52E-144 T 25-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme SMA_RS00300 db4e159dc797ebcaca3af0530c626f72 494 Gene3D G3DSA:3.40.50.1100 204 447 4.5E-90 T 25-04-2016 SMA_RS00300 db4e159dc797ebcaca3af0530c626f72 494 TIGRFAM TIGR00260 thrC: threonine synthase 82 442 1.6E-70 T 25-04-2016 IPR004450 Threonine synthase-like SMA_RS00300 db4e159dc797ebcaca3af0530c626f72 494 PANTHER PTHR10314 373 446 1.4E-124 T 25-04-2016 SMA_RS00300 db4e159dc797ebcaca3af0530c626f72 494 PANTHER PTHR10314 54 343 1.4E-124 T 25-04-2016 SMA_RS00300 db4e159dc797ebcaca3af0530c626f72 494 PANTHER PTHR10314 27 38 1.4E-124 T 25-04-2016 SMA_RS00300 db4e159dc797ebcaca3af0530c626f72 494 Gene3D G3DSA:3.40.50.1100 122 203 7.4E-10 T 25-04-2016 SMA_RS06650 26dac4eeb8f8722e733fb80e8be58f30 177 PANTHER PTHR24093 12 164 3.1E-25 T 25-04-2016 SMA_RS06650 26dac4eeb8f8722e733fb80e8be58f30 177 PANTHER PTHR24093:SF332 12 164 3.1E-25 T 25-04-2016 SMA_RS01475 f96fa7ab7c18cda2f5fa6a8ecf1a478d 231 Gene3D G3DSA:3.40.50.150 137 147 1.1E-8 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMA_RS01475 f96fa7ab7c18cda2f5fa6a8ecf1a478d 231 Gene3D G3DSA:3.40.50.150 18 103 1.1E-8 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMA_RS01475 f96fa7ab7c18cda2f5fa6a8ecf1a478d 231 SUPERFAMILY SSF53335 13 148 2.08E-12 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMA_RS01505 702c4c106a61f3d6e1b1e8e23f7ed5c0 219 SUPERFAMILY SSF53098 51 213 2.02E-36 T 25-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMA_RS01505 702c4c106a61f3d6e1b1e8e23f7ed5c0 219 PANTHER PTHR32552 1 219 3.1E-35 T 25-04-2016 SMA_RS01505 702c4c106a61f3d6e1b1e8e23f7ed5c0 219 Pfam PF00665 Integrase core domain 57 173 8.9E-27 T 25-04-2016 IPR001584 Integrase, catalytic core GO:0015074 SMA_RS01505 702c4c106a61f3d6e1b1e8e23f7ed5c0 219 Gene3D G3DSA:3.30.420.10 51 212 1.4E-32 T 25-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMA_RS02770 66168803e3c7b8c71d44bcf21e9c9c59 187 SUPERFAMILY SSF52540 1 184 4.44E-11 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS02770 66168803e3c7b8c71d44bcf21e9c9c59 187 Gene3D G3DSA:3.40.50.300 1 183 1.1E-9 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS08810 98c5f6a9f6ccf035dd106b25994deb32 151 PANTHER PTHR11086 1 140 4.7E-51 T 25-04-2016 IPR015517 Deoxycytidylate deaminase-related SMA_RS08810 98c5f6a9f6ccf035dd106b25994deb32 151 SUPERFAMILY SSF53927 9 141 2.51E-40 T 25-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 SMA_RS08810 98c5f6a9f6ccf035dd106b25994deb32 151 Gene3D G3DSA:3.40.140.10 6 140 1.5E-42 T 25-04-2016 SMA_RS08810 98c5f6a9f6ccf035dd106b25994deb32 151 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 71 106 - T 25-04-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 SMA_RS08810 98c5f6a9f6ccf035dd106b25994deb32 151 PIRSF PIRSF006019 1 150 1.9E-54 T 25-04-2016 IPR016473 Deoxycytidylate deaminase GO:0004132|GO:0006220|GO:0008270 KEGG: 00240+3.5.4.12|MetaCyc: PWY-7210 SMA_RS08810 98c5f6a9f6ccf035dd106b25994deb32 151 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 6 116 2.3E-27 T 25-04-2016 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 SMA_RS02330 019a69293d2943d6d4090c91baffba4a 244 PANTHER PTHR24220:SF160 3 235 1.2E-82 T 25-04-2016 SMA_RS02330 019a69293d2943d6d4090c91baffba4a 244 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SMA_RS02330 019a69293d2943d6d4090c91baffba4a 244 SUPERFAMILY SSF52540 2 223 5.86E-58 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS02330 019a69293d2943d6d4090c91baffba4a 244 Gene3D G3DSA:3.40.50.300 1 223 1.0E-62 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS02330 019a69293d2943d6d4090c91baffba4a 244 PANTHER PTHR24220 3 235 1.2E-82 T 25-04-2016 SMA_RS02330 019a69293d2943d6d4090c91baffba4a 244 SMART SM00382 26 208 1.2E-5 T 25-04-2016 IPR003593 AAA+ ATPase domain SMA_RS02330 019a69293d2943d6d4090c91baffba4a 244 Pfam PF00005 ABC transporter 17 160 2.1E-25 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMA_RS01120 2a07dc54c8478017da051720249a58a0 430 Pfam PF01547 Bacterial extracellular solute-binding protein 47 330 1.4E-35 T 25-04-2016 IPR006059 Solute-binding family 1 GO:0005215|GO:0006810 SMA_RS01120 2a07dc54c8478017da051720249a58a0 430 Gene3D G3DSA:3.40.190.10 139 317 1.1E-28 T 25-04-2016 SMA_RS01120 2a07dc54c8478017da051720249a58a0 430 PANTHER PTHR30061:SF1 1 364 1.3E-50 T 25-04-2016 SMA_RS01120 2a07dc54c8478017da051720249a58a0 430 PANTHER PTHR30061 1 364 1.3E-50 T 25-04-2016 SMA_RS01120 2a07dc54c8478017da051720249a58a0 430 SUPERFAMILY SSF53850 20 424 1.97E-58 T 25-04-2016 SMA_RS01120 2a07dc54c8478017da051720249a58a0 430 Gene3D G3DSA:3.40.190.10 29 137 1.3E-22 T 25-04-2016 SMA_RS01120 2a07dc54c8478017da051720249a58a0 430 Gene3D G3DSA:3.40.190.10 318 351 1.3E-22 T 25-04-2016 SMA_RS05265 7839ea80e690c53936651dd1fb5abbff 356 Gene3D G3DSA:3.40.50.2300 161 324 1.4E-52 T 25-04-2016 SMA_RS05265 7839ea80e690c53936651dd1fb5abbff 356 Gene3D G3DSA:3.40.50.2300 34 160 4.4E-52 T 25-04-2016 SMA_RS05265 7839ea80e690c53936651dd1fb5abbff 356 Pfam PF02608 Basic membrane protein 38 351 1.2E-74 T 25-04-2016 IPR003760 Basic membrane lipoprotein GO:0005886 SMA_RS05265 7839ea80e690c53936651dd1fb5abbff 356 PANTHER PTHR34296:SF2 26 350 2.4E-121 T 25-04-2016 SMA_RS05265 7839ea80e690c53936651dd1fb5abbff 356 SUPERFAMILY SSF53822 50 264 2.89E-19 T 25-04-2016 IPR028082 Periplasmic binding protein-like I SMA_RS05265 7839ea80e690c53936651dd1fb5abbff 356 PANTHER PTHR34296 26 350 2.4E-121 T 25-04-2016 SMA_RS04645 6b962d91fad1a77f7bb23f577a2f5fa8 67 Gene3D G3DSA:2.40.50.140 1 64 6.9E-31 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMA_RS04645 6b962d91fad1a77f7bb23f577a2f5fa8 67 SMART SM00357 3 66 1.9E-29 T 25-04-2016 IPR011129 Cold shock protein GO:0003676 SMA_RS04645 6b962d91fad1a77f7bb23f577a2f5fa8 67 PANTHER PTHR11544 1 67 1.1E-36 T 25-04-2016 SMA_RS04645 6b962d91fad1a77f7bb23f577a2f5fa8 67 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 33 - T 25-04-2016 IPR019844 Cold-shock conserved site SMA_RS04645 6b962d91fad1a77f7bb23f577a2f5fa8 67 PIRSF PIRSF002599 1 67 1.2E-23 T 25-04-2016 IPR012156 Cold shock, CspA GO:0003676 SMA_RS04645 6b962d91fad1a77f7bb23f577a2f5fa8 67 SUPERFAMILY SSF50249 1 66 5.78E-24 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMA_RS04645 6b962d91fad1a77f7bb23f577a2f5fa8 67 PRINTS PR00050 Cold shock protein signature 4 19 7.0E-18 T 25-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 SMA_RS04645 6b962d91fad1a77f7bb23f577a2f5fa8 67 PRINTS PR00050 Cold shock protein signature 39 57 7.0E-18 T 25-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 SMA_RS04645 6b962d91fad1a77f7bb23f577a2f5fa8 67 PRINTS PR00050 Cold shock protein signature 24 33 7.0E-18 T 25-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 SMA_RS04645 6b962d91fad1a77f7bb23f577a2f5fa8 67 Pfam PF00313 'Cold-shock' DNA-binding domain 2 65 1.9E-29 T 25-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 SMA_RS02115 90c08c5a7b32e788833d8d982f9420c1 270 PANTHER PTHR10000 1 270 2.2E-94 T 25-04-2016 SMA_RS02115 90c08c5a7b32e788833d8d982f9420c1 270 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 263 2.0E-53 T 25-04-2016 IPR000150 Cof protein GO:0016787 SMA_RS02115 90c08c5a7b32e788833d8d982f9420c1 270 Gene3D G3DSA:3.40.50.1000 1 73 5.2E-54 T 25-04-2016 IPR023214 HAD-like domain SMA_RS02115 90c08c5a7b32e788833d8d982f9420c1 270 Gene3D G3DSA:3.40.50.1000 171 270 5.2E-54 T 25-04-2016 IPR023214 HAD-like domain SMA_RS02115 90c08c5a7b32e788833d8d982f9420c1 270 PANTHER PTHR10000:SF23 1 270 2.2E-94 T 25-04-2016 SMA_RS02115 90c08c5a7b32e788833d8d982f9420c1 270 SUPERFAMILY SSF56784 1 269 9.67E-68 T 25-04-2016 IPR023214 HAD-like domain SMA_RS02115 90c08c5a7b32e788833d8d982f9420c1 270 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 265 3.4E-64 T 25-04-2016 IPR023214 HAD-like domain SMA_RS02115 90c08c5a7b32e788833d8d982f9420c1 270 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 237 3.0E-27 T 25-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 SMA_RS06465 81b0a32cfdd3e4f311ac94d5a42d1d7f 338 Gene3D G3DSA:3.90.550.10 1 245 3.2E-42 T 25-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SMA_RS06465 81b0a32cfdd3e4f311ac94d5a42d1d7f 338 Pfam PF00535 Glycosyl transferase family 2 4 136 2.8E-25 T 25-04-2016 IPR001173 Glycosyltransferase 2-like SMA_RS06465 81b0a32cfdd3e4f311ac94d5a42d1d7f 338 PANTHER PTHR22916 1 296 1.4E-39 T 25-04-2016 SMA_RS06465 81b0a32cfdd3e4f311ac94d5a42d1d7f 338 SUPERFAMILY SSF53448 2 228 1.85E-43 T 25-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SMA_RS04405 70ee33456a64e87d2d0624b1497fc020 333 Pfam PF11380 Stealth protein CR2, conserved region 2 43 147 6.7E-44 T 25-04-2016 IPR021520 Stealth protein CR2, conserved region 2 GO:0016772 KEGG: 00563+2.7.-.- SMA_RS04405 70ee33456a64e87d2d0624b1497fc020 333 Pfam PF17102 Stealth protein CR3, conserved region 3 216 263 1.1E-7 T 25-04-2016 IPR031357 Stealth protein CR3, conserved region 3 SMA_RS04405 70ee33456a64e87d2d0624b1497fc020 333 Pfam PF17101 Stealth protein CR1, conserved region 1 3 29 1.4E-14 T 25-04-2016 IPR031358 Stealth protein CR1, conserved region 1 KEGG: 00563+2.7.-.- SMA_RS04405 70ee33456a64e87d2d0624b1497fc020 333 Pfam PF17103 Stealth protein CR4, conserved region 4 291 333 3.8E-7 T 25-04-2016 IPR031356 Stealth protein CR4, conserved region 4 SMA_RS04405 70ee33456a64e87d2d0624b1497fc020 333 PANTHER PTHR24045 1 214 5.3E-52 T 25-04-2016 SMA_RS04405 70ee33456a64e87d2d0624b1497fc020 333 PANTHER PTHR24045 231 333 5.3E-52 T 25-04-2016 SMA_RS05780 6cbf124f914006479f727ecaa2c1002d 167 SUPERFAMILY SSF160369 6 160 1.7E-50 T 25-04-2016 SMA_RS05780 6cbf124f914006479f727ecaa2c1002d 167 Pfam PF00466 Ribosomal protein L10 7 102 3.0E-27 T 25-04-2016 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 SMA_RS05780 6cbf124f914006479f727ecaa2c1002d 167 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 7 145 0.005 T 25-04-2016 SMA_RS05780 6cbf124f914006479f727ecaa2c1002d 167 PANTHER PTHR11560 1 162 3.0E-54 T 25-04-2016 SMA_RS05780 6cbf124f914006479f727ecaa2c1002d 167 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 4 162 27.442 T 25-04-2016 IPR022973 Ribosomal protein L10 SMA_RS05780 6cbf124f914006479f727ecaa2c1002d 167 ProSitePatterns PS01109 Ribosomal protein L10 signature. 9 43 - T 25-04-2016 IPR002363 Ribosomal protein L10, eubacterial, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS01045 25ad4c76185e78325429fa178d6ae77e 164 Gene3D G3DSA:3.40.630.30 1 161 2.0E-37 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMA_RS01045 25ad4c76185e78325429fa178d6ae77e 164 PANTHER PTHR23091 1 158 1.1E-25 T 25-04-2016 SMA_RS01045 25ad4c76185e78325429fa178d6ae77e 164 PIRSF PIRSF037663 1 148 8.8E-12 T 25-04-2016 IPR017255 Acetyltransferase, GNAT, predicted SMA_RS01045 25ad4c76185e78325429fa178d6ae77e 164 SUPERFAMILY SSF55729 1 157 5.57E-35 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMA_RS01045 25ad4c76185e78325429fa178d6ae77e 164 Pfam PF13673 Acetyltransferase (GNAT) domain 35 137 6.7E-15 T 25-04-2016 IPR000182 GNAT domain GO:0008080 SMA_RS06405 5fe16b9f1bdbffc713a5714640deed4c 308 Pfam PF00535 Glycosyl transferase family 2 5 169 1.2E-32 T 25-04-2016 IPR001173 Glycosyltransferase 2-like SMA_RS06405 5fe16b9f1bdbffc713a5714640deed4c 308 SUPERFAMILY SSF53448 1 256 5.63E-42 T 25-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SMA_RS06405 5fe16b9f1bdbffc713a5714640deed4c 308 Gene3D G3DSA:3.90.550.10 1 149 5.9E-28 T 25-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SMA_RS06405 5fe16b9f1bdbffc713a5714640deed4c 308 PANTHER PTHR10859:SF81 1 307 1.4E-137 T 25-04-2016 SMA_RS06405 5fe16b9f1bdbffc713a5714640deed4c 308 PANTHER PTHR10859 1 307 1.4E-137 T 25-04-2016 SMA_RS07375 6021a03f8cdfafd8023881248f8a44fa 128 Pfam PF09148 Domain of unknown function (DUF1934) 4 125 5.0E-21 T 25-04-2016 IPR015231 Protein of unknown function DUF1934 SMA_RS07375 6021a03f8cdfafd8023881248f8a44fa 128 SUPERFAMILY SSF50814 1 127 7.85E-32 T 25-04-2016 IPR011038 Calycin-like SMA_RS07375 6021a03f8cdfafd8023881248f8a44fa 128 Gene3D G3DSA:2.40.128.20 2 127 7.1E-27 T 25-04-2016 IPR012674 Calycin SMA_RS00385 c19f6cf13f3b75407208318f036bcc47 86 PRINTS PR00973 Ribosomal protein S17 family signature 67 74 1.6E-11 T 25-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS00385 c19f6cf13f3b75407208318f036bcc47 86 PRINTS PR00973 Ribosomal protein S17 family signature 57 67 1.6E-11 T 25-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS00385 c19f6cf13f3b75407208318f036bcc47 86 PRINTS PR00973 Ribosomal protein S17 family signature 25 48 1.6E-11 T 25-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS00385 c19f6cf13f3b75407208318f036bcc47 86 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 5 77 6.0E-35 T 25-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS00385 c19f6cf13f3b75407208318f036bcc47 86 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 6 77 2.9E-35 T 25-04-2016 IPR019984 Ribosomal protein S17, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS00385 c19f6cf13f3b75407208318f036bcc47 86 Gene3D G3DSA:2.40.50.140 6 83 8.1E-35 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMA_RS00385 c19f6cf13f3b75407208318f036bcc47 86 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 4 82 24.436 T 25-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS00385 c19f6cf13f3b75407208318f036bcc47 86 Pfam PF00366 Ribosomal protein S17 11 78 1.5E-32 T 25-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS00385 c19f6cf13f3b75407208318f036bcc47 86 SUPERFAMILY SSF50249 6 83 3.08E-32 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMA_RS00385 c19f6cf13f3b75407208318f036bcc47 86 ProSitePatterns PS00056 Ribosomal protein S17 signature. 57 69 - T 25-04-2016 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS00385 c19f6cf13f3b75407208318f036bcc47 86 PANTHER PTHR10744 3 85 4.8E-41 T 25-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS04555 8055d5e1ce977b17b8dcec7669aebb67 203 Pfam PF09335 SNARE associated Golgi protein 74 190 5.9E-19 T 25-04-2016 IPR032816 SNARE associated Golgi protein SMA_RS04555 8055d5e1ce977b17b8dcec7669aebb67 203 PANTHER PTHR12677:SF26 21 190 6.3E-14 T 25-04-2016 SMA_RS04555 8055d5e1ce977b17b8dcec7669aebb67 203 PANTHER PTHR12677 21 190 6.3E-14 T 25-04-2016 IPR015414 Transmembrane protein TMEM64/TMEM41 GO:0016021 SMA_RS06470 03dae733069fa579c6e2f19ecd3a781d 402 SMART SM00382 56 228 8.7E-12 T 25-04-2016 IPR003593 AAA+ ATPase domain SMA_RS06470 03dae733069fa579c6e2f19ecd3a781d 402 Gene3D G3DSA:3.40.50.300 3 243 1.3E-49 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS06470 03dae733069fa579c6e2f19ecd3a781d 402 PANTHER PTHR24220 44 263 2.7E-97 T 25-04-2016 SMA_RS06470 03dae733069fa579c6e2f19ecd3a781d 402 PANTHER PTHR24220 9 19 2.7E-97 T 25-04-2016 SMA_RS06470 03dae733069fa579c6e2f19ecd3a781d 402 SUPERFAMILY SSF52540 35 243 5.21E-47 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS06470 03dae733069fa579c6e2f19ecd3a781d 402 Pfam PF00005 ABC transporter 47 178 2.8E-21 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMA_RS06470 03dae733069fa579c6e2f19ecd3a781d 402 PANTHER PTHR24220:SF117 44 263 2.7E-97 T 25-04-2016 SMA_RS06470 03dae733069fa579c6e2f19ecd3a781d 402 PANTHER PTHR24220:SF117 9 19 2.7E-97 T 25-04-2016 SMA_RS06470 03dae733069fa579c6e2f19ecd3a781d 402 ProSitePatterns PS00211 ABC transporters family signature. 152 166 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SMA_RS08315 e026fa5abdff5f576b2d9c8ead5dd80c 155 Gene3D G3DSA:3.10.580.10 4 147 3.8E-29 T 25-04-2016 SMA_RS08315 e026fa5abdff5f576b2d9c8ead5dd80c 155 Pfam PF00571 CBS domain 87 137 4.5E-8 T 25-04-2016 IPR000644 CBS domain SMA_RS08315 e026fa5abdff5f576b2d9c8ead5dd80c 155 Pfam PF00571 CBS domain 35 71 2.5E-6 T 25-04-2016 IPR000644 CBS domain SMA_RS08315 e026fa5abdff5f576b2d9c8ead5dd80c 155 SUPERFAMILY SSF54631 15 138 4.93E-26 T 25-04-2016 SMA_RS08315 e026fa5abdff5f576b2d9c8ead5dd80c 155 PANTHER PTHR11911:SF103 22 150 1.1E-27 T 25-04-2016 SMA_RS08315 e026fa5abdff5f576b2d9c8ead5dd80c 155 SMART SM00116 23 71 10.0 T 25-04-2016 IPR000644 CBS domain SMA_RS08315 e026fa5abdff5f576b2d9c8ead5dd80c 155 SMART SM00116 92 138 0.022 T 25-04-2016 IPR000644 CBS domain SMA_RS08315 e026fa5abdff5f576b2d9c8ead5dd80c 155 PANTHER PTHR11911 22 150 1.1E-27 T 25-04-2016 SMA_RS05280 3de7b718f31a5d6181ce8770b9615734 306 SUPERFAMILY SSF52540 3 305 4.75E-69 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS05280 3de7b718f31a5d6181ce8770b9615734 306 Hamap MF_00215 Pantothenate kinase [coaA]. 1 306 145.569 T 25-04-2016 IPR004566 Bacterial pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 SMA_RS05280 3de7b718f31a5d6181ce8770b9615734 306 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 86 225 3.2E-13 T 25-04-2016 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0008152|GO:0016301 SMA_RS05280 3de7b718f31a5d6181ce8770b9615734 306 PANTHER PTHR10285 268 306 4.2E-125 T 25-04-2016 SMA_RS05280 3de7b718f31a5d6181ce8770b9615734 306 PANTHER PTHR10285 1 252 4.2E-125 T 25-04-2016 SMA_RS05280 3de7b718f31a5d6181ce8770b9615734 306 Gene3D G3DSA:3.40.50.300 7 305 4.6E-99 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS05280 3de7b718f31a5d6181ce8770b9615734 306 PIRSF PIRSF000545 1 306 2.9E-133 T 25-04-2016 IPR004566 Bacterial pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 SMA_RS05280 3de7b718f31a5d6181ce8770b9615734 306 TIGRFAM TIGR00554 panK_bact: pantothenate kinase 8 306 1.6E-94 T 25-04-2016 IPR004566 Bacterial pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 SMA_RS05280 3de7b718f31a5d6181ce8770b9615734 306 PANTHER PTHR10285:SF7 268 306 4.2E-125 T 25-04-2016 IPR004566 Bacterial pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 SMA_RS05280 3de7b718f31a5d6181ce8770b9615734 306 PANTHER PTHR10285:SF7 1 252 4.2E-125 T 25-04-2016 IPR004566 Bacterial pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 SMA_RS10275 f06931a602a0243ac68c502714aeb1c5 205 PANTHER PTHR34297:SF1 9 161 5.0E-52 T 25-04-2016 SMA_RS10275 f06931a602a0243ac68c502714aeb1c5 205 Pfam PF03780 Asp23 family, cell envelope-related function 31 137 4.5E-29 T 25-04-2016 IPR005531 Alkaline shock protein Asp23 SMA_RS10275 f06931a602a0243ac68c502714aeb1c5 205 PANTHER PTHR34297 9 161 5.0E-52 T 25-04-2016 SMA_RS04750 f929111842df62bee6be7f3167160f41 189 SMART SM01118 3 189 1.4E-21 T 25-04-2016 IPR023577 CYTH domain SMA_RS04750 f929111842df62bee6be7f3167160f41 189 Pfam PF01928 CYTH domain 4 182 1.7E-31 T 25-04-2016 IPR023577 CYTH domain SMA_RS04750 f929111842df62bee6be7f3167160f41 189 SUPERFAMILY SSF55154 3 184 1.01E-29 T 25-04-2016 IPR033469 CYTH-like domain SMA_RS04750 f929111842df62bee6be7f3167160f41 189 PANTHER PTHR41266 1 182 8.5E-56 T 25-04-2016 SMA_RS04750 f929111842df62bee6be7f3167160f41 189 Gene3D G3DSA:2.40.320.10 4 171 3.2E-18 T 25-04-2016 IPR023577 CYTH domain SMA_RS04750 f929111842df62bee6be7f3167160f41 189 PIRSF PIRSF012526 1 189 9.2E-74 T 25-04-2016 IPR009195 Uncharacterised protein family YjbK KEGG: 00230+3.6.1.-|KEGG: 00332+3.6.1.-|KEGG: 00790+3.6.1.- SMA_RS05645 c966599004f9129d0b4802a23704ecf6 296 PANTHER PTHR22911:SF41 7 294 2.6E-96 T 25-04-2016 SMA_RS05645 c966599004f9129d0b4802a23704ecf6 296 Pfam PF00892 EamA-like transporter family 156 283 3.0E-7 T 25-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 SMA_RS05645 c966599004f9129d0b4802a23704ecf6 296 Pfam PF00892 EamA-like transporter family 6 145 2.5E-14 T 25-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 SMA_RS05645 c966599004f9129d0b4802a23704ecf6 296 TIGRFAM TIGR00688 rarD: protein RarD 7 259 1.8E-57 T 25-04-2016 IPR004626 RarD protein GO:0005215|GO:0005887|GO:0006810 SMA_RS05645 c966599004f9129d0b4802a23704ecf6 296 SUPERFAMILY SSF103481 188 286 1.96E-9 T 25-04-2016 SMA_RS05645 c966599004f9129d0b4802a23704ecf6 296 SUPERFAMILY SSF103481 40 148 6.02E-10 T 25-04-2016 SMA_RS05645 c966599004f9129d0b4802a23704ecf6 296 PANTHER PTHR22911 7 294 2.6E-96 T 25-04-2016 SMA_RS00810 86a672274cd3e147db50685383897f9d 208 SUPERFAMILY SSF50249 95 200 3.43E-28 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMA_RS00810 86a672274cd3e147db50685383897f9d 208 PANTHER PTHR10947:SF0 95 203 1.1E-19 T 25-04-2016 SMA_RS00810 86a672274cd3e147db50685383897f9d 208 PANTHER PTHR10947 95 203 1.1E-19 T 25-04-2016 SMA_RS00810 86a672274cd3e147db50685383897f9d 208 Pfam PF14794 Domain of unknown function (DUF4479) 22 91 9.6E-27 T 25-04-2016 IPR027855 Domain of unknown function DUF4479 SMA_RS00810 86a672274cd3e147db50685383897f9d 208 Gene3D G3DSA:3.30.1940.10 20 91 1.8E-27 T 25-04-2016 IPR027855 Domain of unknown function DUF4479 SMA_RS00810 86a672274cd3e147db50685383897f9d 208 Gene3D G3DSA:2.40.50.140 93 202 1.8E-37 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMA_RS00810 86a672274cd3e147db50685383897f9d 208 Pfam PF01588 Putative tRNA binding domain 96 198 3.5E-17 T 25-04-2016 IPR002547 tRNA-binding domain GO:0000049 Reactome: REACT_71 SMA_RS00250 f85938952c3c52f28731d7e6d5856bee 487 PIRSF PIRSF000485 8 473 7.0E-174 T 25-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 SMA_RS00250 f85938952c3c52f28731d7e6d5856bee 487 Gene3D G3DSA:3.40.50.2020 270 435 3.8E-45 T 25-04-2016 IPR029057 Phosphoribosyltransferase-like SMA_RS00250 f85938952c3c52f28731d7e6d5856bee 487 SUPERFAMILY SSF53271 248 465 1.97E-72 T 25-04-2016 IPR029057 Phosphoribosyltransferase-like SMA_RS00250 f85938952c3c52f28731d7e6d5856bee 487 Pfam PF00156 Phosphoribosyl transferase domain 276 384 1.8E-10 T 25-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 SMA_RS00250 f85938952c3c52f28731d7e6d5856bee 487 PANTHER PTHR11907 9 471 5.7E-232 T 25-04-2016 SMA_RS00250 f85938952c3c52f28731d7e6d5856bee 487 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 11 459 45.976 T 25-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 SMA_RS00250 f85938952c3c52f28731d7e6d5856bee 487 Gene3D G3DSA:3.60.20.10 12 255 6.2E-65 T 25-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SMA_RS00250 f85938952c3c52f28731d7e6d5856bee 487 Pfam PF13537 Glutamine amidotransferase domain 92 210 9.0E-19 T 25-04-2016 IPR017932 Glutamine amidotransferase type 2 domain SMA_RS00250 f85938952c3c52f28731d7e6d5856bee 487 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 12 458 3.4E-155 T 25-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 SMA_RS00250 f85938952c3c52f28731d7e6d5856bee 487 PANTHER PTHR11907:SF0 9 471 5.7E-232 T 25-04-2016 SMA_RS00250 f85938952c3c52f28731d7e6d5856bee 487 SUPERFAMILY SSF56235 12 239 5.83E-67 T 25-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SMA_RS03030 02b456761db7f23355f4f9379cfc3cfe 457 Pfam PF11983 Membrane-attachment and polymerisation-promoting switch 377 457 6.7E-19 T 25-04-2016 IPR021873 Cell division protein FtsA, C-terminal SMA_RS03030 02b456761db7f23355f4f9379cfc3cfe 457 SMART SM00842 7 194 4.3E-88 T 25-04-2016 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 SMA_RS03030 02b456761db7f23355f4f9379cfc3cfe 457 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 7 370 1.4E-99 T 25-04-2016 IPR020823 Cell division protein FtsA GO:0007049 SMA_RS03030 02b456761db7f23355f4f9379cfc3cfe 457 Pfam PF14450 Cell division protein FtsA 9 176 2.4E-8 T 25-04-2016 SMA_RS03030 02b456761db7f23355f4f9379cfc3cfe 457 Pfam PF14450 Cell division protein FtsA 206 365 1.3E-17 T 25-04-2016 SMA_RS03030 02b456761db7f23355f4f9379cfc3cfe 457 PANTHER PTHR32432 1 399 5.3E-136 T 25-04-2016 SMA_RS03030 02b456761db7f23355f4f9379cfc3cfe 457 SUPERFAMILY SSF53067 197 365 1.15E-38 T 25-04-2016 SMA_RS03030 02b456761db7f23355f4f9379cfc3cfe 457 Gene3D G3DSA:3.90.640.10 233 295 1.7E-21 T 25-04-2016 SMA_RS03030 02b456761db7f23355f4f9379cfc3cfe 457 PIRSF PIRSF003101 1 456 2.3E-127 T 25-04-2016 IPR020823 Cell division protein FtsA GO:0007049 SMA_RS03030 02b456761db7f23355f4f9379cfc3cfe 457 PANTHER PTHR32432:SF4 1 399 5.3E-136 T 25-04-2016 SMA_RS03030 02b456761db7f23355f4f9379cfc3cfe 457 SUPERFAMILY SSF53067 6 195 1.62E-56 T 25-04-2016 SMA_RS03030 02b456761db7f23355f4f9379cfc3cfe 457 Gene3D G3DSA:3.30.420.40 296 347 2.2E-18 T 25-04-2016 SMA_RS03030 02b456761db7f23355f4f9379cfc3cfe 457 Gene3D G3DSA:3.30.420.40 195 232 2.2E-18 T 25-04-2016 SMA_RS03030 02b456761db7f23355f4f9379cfc3cfe 457 Hamap MF_02033 Cell division protein FtsA [ftsA]. 3 456 28.069 T 25-04-2016 IPR020823 Cell division protein FtsA GO:0007049 SMA_RS03030 02b456761db7f23355f4f9379cfc3cfe 457 Pfam PF02491 SHS2 domain inserted in FTSA 85 160 3.1E-21 T 25-04-2016 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 SMA_RS03030 02b456761db7f23355f4f9379cfc3cfe 457 Gene3D G3DSA:3.30.420.40 1 138 3.2E-52 T 25-04-2016 SMA_RS08255 58270d7afe2e65679ce68189d91b5007 181 Gene3D G3DSA:3.40.1280.10 5 179 1.6E-62 T 25-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal SMA_RS08255 58270d7afe2e65679ce68189d91b5007 181 PANTHER PTHR12029 10 173 7.7E-71 T 25-04-2016 SMA_RS08255 58270d7afe2e65679ce68189d91b5007 181 SUPERFAMILY SSF75217 6 180 1.11E-39 T 25-04-2016 IPR029028 Alpha/beta knot methyltransferases SMA_RS08255 58270d7afe2e65679ce68189d91b5007 181 Pfam PF00588 SpoU rRNA Methylase family 18 158 5.0E-33 T 25-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 SMA_RS08255 58270d7afe2e65679ce68189d91b5007 181 PANTHER PTHR12029:SF31 10 173 7.7E-71 T 25-04-2016 SMA_RS08255 58270d7afe2e65679ce68189d91b5007 181 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 17 167 34.241 T 25-04-2016 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 SMA_RS08255 58270d7afe2e65679ce68189d91b5007 181 PIRSF PIRSF029256 16 170 2.7E-60 T 25-04-2016 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 SMA_RS10665 2448ea54d88b1825d319d821857247b3 129 SUPERFAMILY SSF56672 13 103 2.89E-6 T 25-04-2016 SMA_RS10665 2448ea54d88b1825d319d821857247b3 129 Pfam PF08388 Group II intron, maturase-specific domain 66 129 5.6E-15 T 25-04-2016 IPR013597 Group II intron, maturase-specific SMA_RS02955 9cdb62249f62895b04c014d5e58bd85b 216 Pfam PF06750 Bacterial Peptidase A24 N-terminal domain 9 88 1.2E-21 T 25-04-2016 IPR010627 Peptidase A24A, N-terminal KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- SMA_RS02955 9cdb62249f62895b04c014d5e58bd85b 216 PANTHER PTHR30487:SF0 1 213 3.6E-29 T 25-04-2016 SMA_RS02955 9cdb62249f62895b04c014d5e58bd85b 216 PANTHER PTHR30487 1 213 3.6E-29 T 25-04-2016 SMA_RS02050 288f6bd9dd4cd142462b8eba23cf8acd 306 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 7 302 1.7E-44 T 25-04-2016 IPR020801 Polyketide synthase, acyl transferase domain SMA_RS02050 288f6bd9dd4cd142462b8eba23cf8acd 306 PANTHER PTHR10982 1 305 1.0E-134 T 25-04-2016 SMA_RS02050 288f6bd9dd4cd142462b8eba23cf8acd 306 SUPERFAMILY SSF55048 126 195 7.32E-17 T 25-04-2016 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding GO:0003824|GO:0008152 SMA_RS02050 288f6bd9dd4cd142462b8eba23cf8acd 306 Pfam PF00698 Acyl transferase domain 6 279 1.4E-40 T 25-04-2016 IPR014043 Acyl transferase SMA_RS02050 288f6bd9dd4cd142462b8eba23cf8acd 306 Gene3D G3DSA:3.40.366.10 2 120 1.1E-72 T 25-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 SMA_RS02050 288f6bd9dd4cd142462b8eba23cf8acd 306 Gene3D G3DSA:3.40.366.10 195 298 1.1E-72 T 25-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 SMA_RS02050 288f6bd9dd4cd142462b8eba23cf8acd 306 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 3 287 2.4E-103 T 25-04-2016 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 SMA_RS02050 288f6bd9dd4cd142462b8eba23cf8acd 306 PIRSF PIRSF000446 1 306 2.4E-105 T 25-04-2016 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388|UniPathway: UPA00094 SMA_RS02050 288f6bd9dd4cd142462b8eba23cf8acd 306 SUPERFAMILY SSF52151 4 120 1.52E-74 T 25-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 SMA_RS02050 288f6bd9dd4cd142462b8eba23cf8acd 306 SUPERFAMILY SSF52151 188 304 1.52E-74 T 25-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 SMA_RS02050 288f6bd9dd4cd142462b8eba23cf8acd 306 Gene3D G3DSA:3.30.70.250 124 194 2.0E-28 T 25-04-2016 SMA_RS01480 53147a4cc7e2f0f019ccc437a7f0f173 1464 SMART SM00487 294 485 4.2E-12 T 25-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain SMA_RS01480 53147a4cc7e2f0f019ccc437a7f0f173 1464 Gene3D G3DSA:3.40.50.300 287 459 1.2E-14 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS01480 53147a4cc7e2f0f019ccc437a7f0f173 1464 SUPERFAMILY SSF53335 919 977 1.35E-12 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMA_RS01480 53147a4cc7e2f0f019ccc437a7f0f173 1464 SUPERFAMILY SSF53335 1010 1213 1.35E-12 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMA_RS01480 53147a4cc7e2f0f019ccc437a7f0f173 1464 Pfam PF07669 Eco57I restriction-modification methylase 1114 1213 2.6E-29 T 25-04-2016 IPR011639 Restriction modification methylase Eco57I GO:0003677|GO:0003824|GO:0006304 SMA_RS01480 53147a4cc7e2f0f019ccc437a7f0f173 1464 Gene3D G3DSA:3.40.50.150 1009 1208 3.1E-8 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMA_RS01480 53147a4cc7e2f0f019ccc437a7f0f173 1464 Pfam PF04851 Type III restriction enzyme, res subunit 297 458 3.8E-13 T 25-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 SMA_RS01480 53147a4cc7e2f0f019ccc437a7f0f173 1464 SUPERFAMILY SSF52540 285 478 2.45E-22 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS01480 53147a4cc7e2f0f019ccc437a7f0f173 1464 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 1119 1125 - T 25-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 SMA_RS07395 04ffabfe9f7f73a3f8c29444523dd5ae 404 SUPERFAMILY SSF55729 164 240 2.68E-24 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMA_RS07395 04ffabfe9f7f73a3f8c29444523dd5ae 404 Gene3D G3DSA:3.40.630.30 1 168 2.6E-61 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMA_RS07395 04ffabfe9f7f73a3f8c29444523dd5ae 404 Pfam PF02388 FemAB family 8 394 8.4E-129 T 25-04-2016 IPR003447 FemABX peptidyl transferase GO:0009252|GO:0016755 SMA_RS07395 04ffabfe9f7f73a3f8c29444523dd5ae 404 PANTHER PTHR36174 1 404 5.4E-86 T 25-04-2016 SMA_RS07395 04ffabfe9f7f73a3f8c29444523dd5ae 404 PANTHER PTHR36174:SF1 1 404 5.4E-86 T 25-04-2016 SMA_RS07395 04ffabfe9f7f73a3f8c29444523dd5ae 404 SUPERFAMILY SSF55729 5 162 6.89E-48 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMA_RS07395 04ffabfe9f7f73a3f8c29444523dd5ae 404 Gene3D G3DSA:3.40.630.30 296 370 2.6E-34 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMA_RS07395 04ffabfe9f7f73a3f8c29444523dd5ae 404 Gene3D G3DSA:3.40.630.30 169 239 2.6E-34 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMA_RS07395 04ffabfe9f7f73a3f8c29444523dd5ae 404 SUPERFAMILY SSF55729 297 389 2.68E-24 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMA_RS00215 eecc2ea2e0fc887da4ef3e3e384b84e8 322 Hamap MF_00583_B Ribose-phosphate pyrophosphokinase [prs]. 6 317 50.176 T 25-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 SMA_RS00215 eecc2ea2e0fc887da4ef3e3e384b84e8 322 Gene3D G3DSA:3.40.50.2020 3 161 4.4E-75 T 25-04-2016 IPR029057 Phosphoribosyltransferase-like SMA_RS00215 eecc2ea2e0fc887da4ef3e3e384b84e8 322 PANTHER PTHR10210:SF41 1 322 4.3E-186 T 25-04-2016 SMA_RS00215 eecc2ea2e0fc887da4ef3e3e384b84e8 322 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 7 317 3.1E-122 T 25-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 SMA_RS00215 eecc2ea2e0fc887da4ef3e3e384b84e8 322 Gene3D G3DSA:3.40.50.2020 162 289 8.3E-51 T 25-04-2016 IPR029057 Phosphoribosyltransferase-like SMA_RS00215 eecc2ea2e0fc887da4ef3e3e384b84e8 322 Pfam PF14572 Phosphoribosyl synthetase-associated domain 208 316 6.8E-24 T 25-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 SMA_RS00215 eecc2ea2e0fc887da4ef3e3e384b84e8 322 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 6 122 1.2E-50 T 25-04-2016 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 SMA_RS00215 eecc2ea2e0fc887da4ef3e3e384b84e8 322 SUPERFAMILY SSF53271 71 308 9.3E-63 T 25-04-2016 IPR029057 Phosphoribosyltransferase-like SMA_RS00215 eecc2ea2e0fc887da4ef3e3e384b84e8 322 SMART SM01400 6 122 4.3E-79 T 25-04-2016 SMA_RS00215 eecc2ea2e0fc887da4ef3e3e384b84e8 322 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 130 145 - T 25-04-2016 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: REACT_474|UniPathway: UPA00087 SMA_RS00215 eecc2ea2e0fc887da4ef3e3e384b84e8 322 PANTHER PTHR10210 1 322 4.3E-186 T 25-04-2016 SMA_RS08285 2787bb55df09d82ec8d0befd72b28537 479 Pfam PF02386 Cation transport protein 51 472 3.5E-46 T 25-04-2016 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 SMA_RS08285 2787bb55df09d82ec8d0befd72b28537 479 PIRSF PIRSF006247 1 478 3.6E-128 T 25-04-2016 IPR004772 TrkH potassium transport family GO:0016021|GO:0022820|GO:0071805 SMA_RS08285 2787bb55df09d82ec8d0befd72b28537 479 PANTHER PTHR32024:SF2 1 478 3.7E-190 T 25-04-2016 SMA_RS08285 2787bb55df09d82ec8d0befd72b28537 479 PANTHER PTHR32024 1 478 3.7E-190 T 25-04-2016 SMA_RS09675 59c117f2a3e471e66bdc70c52fe33032 578 Pfam PF01751 Toprim domain 4 133 1.4E-16 T 25-04-2016 IPR006171 Toprim domain SMA_RS09675 59c117f2a3e471e66bdc70c52fe33032 578 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 197 215 1.9E-17 T 25-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 SMA_RS09675 59c117f2a3e471e66bdc70c52fe33032 578 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 485 499 1.9E-17 T 25-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 SMA_RS09675 59c117f2a3e471e66bdc70c52fe33032 578 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 310 319 1.9E-17 T 25-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 SMA_RS09675 59c117f2a3e471e66bdc70c52fe33032 578 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 100 113 1.9E-17 T 25-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 SMA_RS09675 59c117f2a3e471e66bdc70c52fe33032 578 Pfam PF01131 DNA topoisomerase 157 562 9.5E-104 T 25-04-2016 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 SMA_RS09675 59c117f2a3e471e66bdc70c52fe33032 578 SUPERFAMILY SSF56712 2 574 8.63E-141 T 25-04-2016 IPR023405 DNA topoisomerase, type IA, core domain SMA_RS09675 59c117f2a3e471e66bdc70c52fe33032 578 Gene3D G3DSA:3.40.50.140 3 154 1.2E-35 T 25-04-2016 IPR006171 Toprim domain SMA_RS09675 59c117f2a3e471e66bdc70c52fe33032 578 SMART SM00436 128 227 1.1E-23 T 25-04-2016 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 SMA_RS09675 59c117f2a3e471e66bdc70c52fe33032 578 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 305 319 - T 25-04-2016 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 SMA_RS09675 59c117f2a3e471e66bdc70c52fe33032 578 PANTHER PTHR11390 2 578 2.8E-123 T 25-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 SMA_RS09675 59c117f2a3e471e66bdc70c52fe33032 578 SMART SM00493 2 126 5.4E-17 T 25-04-2016 IPR006171 Toprim domain SMA_RS09675 59c117f2a3e471e66bdc70c52fe33032 578 SMART SM00437 268 524 1.1E-53 T 25-04-2016 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 SMA_RS09675 59c117f2a3e471e66bdc70c52fe33032 578 PANTHER PTHR11390:SF21 2 578 2.8E-123 T 25-04-2016 SMA_RS09675 59c117f2a3e471e66bdc70c52fe33032 578 Gene3D G3DSA:1.10.460.10 462 575 4.4E-44 T 25-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 SMA_RS09675 59c117f2a3e471e66bdc70c52fe33032 578 Gene3D G3DSA:1.10.460.10 158 221 4.4E-44 T 25-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 SMA_RS09675 59c117f2a3e471e66bdc70c52fe33032 578 Gene3D G3DSA:2.70.20.10 354 461 2.8E-27 T 25-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 SMA_RS09675 59c117f2a3e471e66bdc70c52fe33032 578 Gene3D G3DSA:2.70.20.10 223 255 2.8E-27 T 25-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 SMA_RS08320 04495e4f64c4f9f1bc8374c8138537ea 173 PANTHER PTHR11124 1 164 4.5E-44 T 25-04-2016 IPR000979 Phosphodiesterase MJ0936/Vps29 SMA_RS08320 04495e4f64c4f9f1bc8374c8138537ea 173 PANTHER PTHR11124:SF14 1 164 4.5E-44 T 25-04-2016 SMA_RS08320 04495e4f64c4f9f1bc8374c8138537ea 173 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 6 149 3.0E-22 T 25-04-2016 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type SMA_RS08320 04495e4f64c4f9f1bc8374c8138537ea 173 TIGRFAM TIGR00040 yfcE: phosphodiesterase, MJ0936 family 6 153 2.8E-19 T 25-04-2016 IPR000979 Phosphodiesterase MJ0936/Vps29 SMA_RS08320 04495e4f64c4f9f1bc8374c8138537ea 173 SUPERFAMILY SSF56300 4 171 9.22E-45 T 25-04-2016 IPR029052 Metallo-dependent phosphatase-like SMA_RS08320 04495e4f64c4f9f1bc8374c8138537ea 173 Gene3D G3DSA:3.60.21.10 4 162 2.9E-41 T 25-04-2016 IPR029052 Metallo-dependent phosphatase-like SMA_RS01380 dba9a93b34f80066aba7dffcfba7ea2f 386 Pfam PF07690 Major Facilitator Superfamily 16 229 4.4E-18 T 25-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SMA_RS01380 dba9a93b34f80066aba7dffcfba7ea2f 386 Gene3D G3DSA:1.20.1250.20 9 184 1.2E-18 T 25-04-2016 SMA_RS01380 dba9a93b34f80066aba7dffcfba7ea2f 386 Gene3D G3DSA:1.20.1250.20 219 378 6.5E-14 T 25-04-2016 SMA_RS01380 dba9a93b34f80066aba7dffcfba7ea2f 386 ProSitePatterns PS00217 Sugar transport proteins signature 2. 104 129 - T 25-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 SMA_RS01380 dba9a93b34f80066aba7dffcfba7ea2f 386 SUPERFAMILY SSF103473 10 381 1.57E-38 T 25-04-2016 IPR020846 Major facilitator superfamily domain SMA_RS09350 bb2a817cb4c04bfe486d9436365ce2ca 189 Hamap MF_01469 Ribonuclease M5 [rnmV]. 7 187 30.899 T 25-04-2016 IPR004466 Ribonuclease M5 GO:0043822 SMA_RS09350 bb2a817cb4c04bfe486d9436365ce2ca 189 Pfam PF01751 Toprim domain 9 84 4.5E-5 T 25-04-2016 IPR006171 Toprim domain SMA_RS09350 bb2a817cb4c04bfe486d9436365ce2ca 189 SUPERFAMILY SSF110455 5 124 4.18E-35 T 25-04-2016 SMA_RS09350 bb2a817cb4c04bfe486d9436365ce2ca 189 TIGRFAM TIGR00334 5S_RNA_mat_M5: ribonuclease M5 6 183 3.5E-46 T 25-04-2016 IPR004466 Ribonuclease M5 GO:0043822 SMA_RS09350 bb2a817cb4c04bfe486d9436365ce2ca 189 Pfam PF13331 Domain of unknown function (DUF4093) 99 184 1.6E-29 T 25-04-2016 IPR025156 Ribonuclease M5, C-terminal domain SMA_RS09350 bb2a817cb4c04bfe486d9436365ce2ca 189 SMART SM00493 8 81 5.5E-4 T 25-04-2016 IPR006171 Toprim domain SMA_RS09350 bb2a817cb4c04bfe486d9436365ce2ca 189 PANTHER PTHR39156 4 188 1.0E-76 T 25-04-2016 SMA_RS09350 bb2a817cb4c04bfe486d9436365ce2ca 189 Gene3D G3DSA:3.40.1360.20 5 126 1.3E-38 T 25-04-2016 SMA_RS10195 72b6d0a1e35b00bb93a5d7f20918195a 118 Pfam PF06133 Control of competence regulator ComK, YlbF/YmcA 6 109 4.2E-15 T 25-04-2016 IPR010368 Control of competence regulator ComK, YlbF/YmcA SMA_RS10195 72b6d0a1e35b00bb93a5d7f20918195a 118 SUPERFAMILY SSF158622 3 113 1.96E-23 T 25-04-2016 IPR023378 YheA/YmcA-like domain SMA_RS10195 72b6d0a1e35b00bb93a5d7f20918195a 118 Gene3D G3DSA:1.20.1500.10 2 116 2.8E-29 T 25-04-2016 IPR023378 YheA/YmcA-like domain SMA_RS10195 72b6d0a1e35b00bb93a5d7f20918195a 118 PIRSF PIRSF021287 1 117 3.7E-35 T 25-04-2016 IPR016783 Biofilm formation YmcA SMA_RS00335 02fcf93c3894626bfd3b6b646502a875 102 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 25-04-2016 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS00335 02fcf93c3894626bfd3b6b646502a875 102 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 3.6E-44 T 25-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 SMA_RS00335 02fcf93c3894626bfd3b6b646502a875 102 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 26.166 T 25-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 SMA_RS00335 02fcf93c3894626bfd3b6b646502a875 102 PANTHER PTHR11700 1 102 4.5E-48 T 25-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 SMA_RS00335 02fcf93c3894626bfd3b6b646502a875 102 Pfam PF00338 Ribosomal protein S10p/S20e 7 101 6.2E-35 T 25-04-2016 IPR027486 Ribosomal protein S10 domain SMA_RS00335 02fcf93c3894626bfd3b6b646502a875 102 Gene3D G3DSA:3.30.70.600 3 102 6.1E-43 T 25-04-2016 IPR027486 Ribosomal protein S10 domain SMA_RS00335 02fcf93c3894626bfd3b6b646502a875 102 SMART SM01403 7 101 9.4E-55 T 25-04-2016 IPR027486 Ribosomal protein S10 domain SMA_RS00335 02fcf93c3894626bfd3b6b646502a875 102 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 3.0E-19 T 25-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 SMA_RS00335 02fcf93c3894626bfd3b6b646502a875 102 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 3.0E-19 T 25-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 SMA_RS00335 02fcf93c3894626bfd3b6b646502a875 102 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 3.0E-19 T 25-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 SMA_RS00335 02fcf93c3894626bfd3b6b646502a875 102 SUPERFAMILY SSF54999 5 102 1.44E-36 T 25-04-2016 IPR027486 Ribosomal protein S10 domain SMA_RS01010 03055b3728b434040e7669da93c4a7c1 423 Pfam PF13535 ATP-grasp domain 146 300 2.7E-17 T 25-04-2016 SMA_RS01010 03055b3728b434040e7669da93c4a7c1 423 Gene3D G3DSA:3.40.50.20 25 109 0.001 T 25-04-2016 IPR016185 Pre-ATP-grasp domain SMA_RS01010 03055b3728b434040e7669da93c4a7c1 423 SUPERFAMILY SSF56059 108 326 5.66E-29 T 25-04-2016 SMA_RS01010 03055b3728b434040e7669da93c4a7c1 423 Gene3D G3DSA:3.30.470.20 110 332 1.0E-21 T 25-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 SMA_RS10225 1a893f98554e6ed8992c8ee0d79d9b04 312 PIRSF PIRSF006483 21 312 1.0E-96 T 25-04-2016 IPR003740 Uncharacterised membrane protein YitT SMA_RS10225 1a893f98554e6ed8992c8ee0d79d9b04 312 PANTHER PTHR33545 23 312 4.1E-108 T 25-04-2016 SMA_RS10225 1a893f98554e6ed8992c8ee0d79d9b04 312 Pfam PF10035 Uncharacterized protein conserved in bacteria (DUF2179) 252 307 4.6E-15 T 25-04-2016 IPR019264 Domain of unknown function DUF2179 SMA_RS10225 1a893f98554e6ed8992c8ee0d79d9b04 312 PANTHER PTHR33545:SF5 23 312 4.1E-108 T 25-04-2016 SMA_RS10225 1a893f98554e6ed8992c8ee0d79d9b04 312 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 44 246 1.2E-55 T 25-04-2016 IPR003740 Uncharacterised membrane protein YitT SMA_RS08715 822056a98813911f783460ef4c5d690c 467 PANTHER PTHR10000 4 279 8.2E-91 T 25-04-2016 SMA_RS08715 822056a98813911f783460ef4c5d690c 467 PIRSF PIRSF037492 1 462 2.1E-263 T 25-04-2016 IPR017223 Predicted hydrolase of the HAD superfamily, SPs0319-type SMA_RS08715 822056a98813911f783460ef4c5d690c 467 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 6 246 5.3E-26 T 25-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 SMA_RS08715 822056a98813911f783460ef4c5d690c 467 SUPERFAMILY SSF56784 3 277 5.4E-63 T 25-04-2016 IPR023214 HAD-like domain SMA_RS08715 822056a98813911f783460ef4c5d690c 467 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 273 2.4E-67 T 25-04-2016 IPR023214 HAD-like domain SMA_RS08715 822056a98813911f783460ef4c5d690c 467 ProSitePatterns PS01229 Hypothetical cof family signature 2. 227 249 - T 25-04-2016 SMA_RS08715 822056a98813911f783460ef4c5d690c 467 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 297 410 6.8E-28 T 25-04-2016 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31|UniPathway: UPA00031 SMA_RS08715 822056a98813911f783460ef4c5d690c 467 Gene3D G3DSA:1.10.3420.10 289 455 5.9E-58 T 25-04-2016 IPR023292 NTP pyrophosphohydrolase-like domain SMA_RS08715 822056a98813911f783460ef4c5d690c 467 Gene3D G3DSA:3.40.50.1000 182 279 1.3E-55 T 25-04-2016 IPR023214 HAD-like domain SMA_RS08715 822056a98813911f783460ef4c5d690c 467 Gene3D G3DSA:3.40.50.1000 3 72 1.3E-55 T 25-04-2016 IPR023214 HAD-like domain SMA_RS08715 822056a98813911f783460ef4c5d690c 467 PANTHER PTHR10000:SF25 4 279 8.2E-91 T 25-04-2016 SMA_RS08715 822056a98813911f783460ef4c5d690c 467 ProSitePatterns PS01228 Hypothetical cof family signature 1. 5 16 - T 25-04-2016 IPR000150 Cof protein GO:0016787 SMA_RS02440 72efbbc85e140a9e44d451af44b6fb5a 390 Pfam PF02926 THUMP domain 21 159 5.8E-7 T 25-04-2016 IPR004114 THUMP domain GO:0003723 SMA_RS02440 72efbbc85e140a9e44d451af44b6fb5a 390 Pfam PF01170 Putative RNA methylase family UPF0020 167 370 8.6E-56 T 25-04-2016 IPR000241 Putative RNA methylase domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SMA_RS02440 72efbbc85e140a9e44d451af44b6fb5a 390 SUPERFAMILY SSF53335 146 222 5.37E-34 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMA_RS02440 72efbbc85e140a9e44d451af44b6fb5a 390 SUPERFAMILY SSF53335 259 368 5.37E-34 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMA_RS02440 72efbbc85e140a9e44d451af44b6fb5a 390 Gene3D G3DSA:3.40.50.150 256 378 1.3E-27 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMA_RS02440 72efbbc85e140a9e44d451af44b6fb5a 390 Gene3D G3DSA:3.40.50.150 149 219 1.3E-27 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMA_RS02440 72efbbc85e140a9e44d451af44b6fb5a 390 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 304 310 - T 25-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 SMA_RS02440 72efbbc85e140a9e44d451af44b6fb5a 390 PANTHER PTHR18895 258 381 2.2E-95 T 25-04-2016 SMA_RS02440 72efbbc85e140a9e44d451af44b6fb5a 390 PANTHER PTHR18895 42 223 2.2E-95 T 25-04-2016 SMA_RS02440 72efbbc85e140a9e44d451af44b6fb5a 390 SMART SM00981 58 159 7.2E-9 T 25-04-2016 IPR004114 THUMP domain GO:0003723 SMA_RS02440 72efbbc85e140a9e44d451af44b6fb5a 390 PANTHER PTHR18895:SF62 258 381 2.2E-95 T 25-04-2016 SMA_RS02440 72efbbc85e140a9e44d451af44b6fb5a 390 PANTHER PTHR18895:SF62 42 223 2.2E-95 T 25-04-2016 SMA_RS05915 47e915d3ea852a92354d290c10ee0955 279 ProSitePatterns PS00063 Aldo/keto reductase family putative active site signature. 226 241 - T 25-04-2016 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 SMA_RS05915 47e915d3ea852a92354d290c10ee0955 279 PANTHER PTHR11732 1 260 2.0E-125 T 25-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta SMA_RS05915 47e915d3ea852a92354d290c10ee0955 279 SUPERFAMILY SSF51430 4 264 3.4E-86 T 25-04-2016 IPR023210 NADP-dependent oxidoreductase domain SMA_RS05915 47e915d3ea852a92354d290c10ee0955 279 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 120 137 - T 25-04-2016 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 SMA_RS05915 47e915d3ea852a92354d290c10ee0955 279 Pfam PF00248 Aldo/keto reductase family 15 258 3.3E-47 T 25-04-2016 IPR023210 NADP-dependent oxidoreductase domain SMA_RS05915 47e915d3ea852a92354d290c10ee0955 279 PRINTS PR00069 Aldo-keto reductase signature 35 59 1.5E-42 T 25-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 SMA_RS05915 47e915d3ea852a92354d290c10ee0955 279 PRINTS PR00069 Aldo-keto reductase signature 154 183 1.5E-42 T 25-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 SMA_RS05915 47e915d3ea852a92354d290c10ee0955 279 PRINTS PR00069 Aldo-keto reductase signature 120 137 1.5E-42 T 25-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 SMA_RS05915 47e915d3ea852a92354d290c10ee0955 279 PRINTS PR00069 Aldo-keto reductase signature 91 109 1.5E-42 T 25-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 SMA_RS05915 47e915d3ea852a92354d290c10ee0955 279 PRINTS PR00069 Aldo-keto reductase signature 193 217 1.5E-42 T 25-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 SMA_RS05915 47e915d3ea852a92354d290c10ee0955 279 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 39 56 - T 25-04-2016 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 SMA_RS05915 47e915d3ea852a92354d290c10ee0955 279 Gene3D G3DSA:3.20.20.100 3 259 1.1E-95 T 25-04-2016 IPR023210 NADP-dependent oxidoreductase domain SMA_RS01160 9ff8c809c38a8f3e9d19ba5747096d60 285 PANTHER PTHR40111:SF1 21 276 3.4E-49 T 25-04-2016 SMA_RS01160 9ff8c809c38a8f3e9d19ba5747096d60 285 Pfam PF05448 Acetyl xylan esterase (AXE1) 4 280 3.3E-96 T 25-04-2016 IPR008391 Acetyl xylan esterase SMA_RS01160 9ff8c809c38a8f3e9d19ba5747096d60 285 PANTHER PTHR40111 21 276 3.4E-49 T 25-04-2016 SMA_RS01160 9ff8c809c38a8f3e9d19ba5747096d60 285 Gene3D G3DSA:3.40.50.1820 4 282 1.1E-71 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMA_RS01160 9ff8c809c38a8f3e9d19ba5747096d60 285 SUPERFAMILY SSF53474 17 279 1.39E-33 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMA_RS05605 798ee0ca715b6c358cb77a200a3b325b 266 Pfam PF00809 Pterin binding enzyme 15 250 5.8E-84 T 25-04-2016 IPR000489 Pterin-binding domain GO:0042558 SMA_RS05605 798ee0ca715b6c358cb77a200a3b325b 266 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 14 264 2.6E-97 T 25-04-2016 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614|UniPathway: UPA00077 SMA_RS05605 798ee0ca715b6c358cb77a200a3b325b 266 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 48 61 - T 25-04-2016 IPR000489 Pterin-binding domain GO:0042558 SMA_RS05605 798ee0ca715b6c358cb77a200a3b325b 266 Gene3D G3DSA:3.20.20.20 6 265 2.3E-104 T 25-04-2016 IPR000489 Pterin-binding domain GO:0042558 SMA_RS05605 798ee0ca715b6c358cb77a200a3b325b 266 PANTHER PTHR20941 14 265 1.3E-111 T 25-04-2016 SMA_RS05605 798ee0ca715b6c358cb77a200a3b325b 266 PANTHER PTHR20941:SF1 14 265 1.3E-111 T 25-04-2016 SMA_RS05605 798ee0ca715b6c358cb77a200a3b325b 266 SUPERFAMILY SSF51717 10 264 2.35E-92 T 25-04-2016 IPR011005 Dihydropteroate synthase-like GO:0044237 SMA_RS05605 798ee0ca715b6c358cb77a200a3b325b 266 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 14 29 - T 25-04-2016 IPR000489 Pterin-binding domain GO:0042558 SMA_RS07345 81a2758ef01c41e3643a3a5ce2f62c25 309 Pfam PF02687 FtsX-like permease family 190 309 4.3E-12 T 25-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 SMA_RS07345 81a2758ef01c41e3643a3a5ce2f62c25 309 PIRSF PIRSF003097 1 309 5.7E-79 T 25-04-2016 IPR004513 Cell division protein FtsX GO:0007049|GO:0016021 SMA_RS07345 81a2758ef01c41e3643a3a5ce2f62c25 309 PANTHER PTHR30489 84 309 3.2E-41 T 25-04-2016 SMA_RS07345 81a2758ef01c41e3643a3a5ce2f62c25 309 PANTHER PTHR30489 11 68 3.2E-41 T 25-04-2016 SMA_RS02385 bc2d6bff312303ad0153bdfd416db7ff 267 Gene3D G3DSA:1.10.3720.10 36 251 8.9E-38 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SMA_RS02385 bc2d6bff312303ad0153bdfd416db7ff 267 PANTHER PTHR30614:SF16 26 256 4.8E-74 T 25-04-2016 SMA_RS02385 bc2d6bff312303ad0153bdfd416db7ff 267 PANTHER PTHR30614 26 256 4.8E-74 T 25-04-2016 SMA_RS02385 bc2d6bff312303ad0153bdfd416db7ff 267 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 35 145 3.6E-16 T 25-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 SMA_RS02385 bc2d6bff312303ad0153bdfd416db7ff 267 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 56 251 4.6E-19 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SMA_RS02385 bc2d6bff312303ad0153bdfd416db7ff 267 SUPERFAMILY SSF161098 37 242 1.96E-35 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SMA_RS10150 3bb269aca6a634b4f25b2b9e60546bcb 384 SUPERFAMILY SSF52540 18 285 2.63E-58 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS10150 3bb269aca6a634b4f25b2b9e60546bcb 384 SUPERFAMILY SSF54752 286 344 4.19E-20 T 25-04-2016 IPR023400 DNA recombination and repair protein RecA, C-terminal SMA_RS10150 3bb269aca6a634b4f25b2b9e60546bcb 384 PANTHER PTHR22942:SF1 17 353 2.6E-194 T 25-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 SMA_RS10150 3bb269aca6a634b4f25b2b9e60546bcb 384 ProSitePatterns PS00321 recA signature. 227 235 - T 25-04-2016 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 SMA_RS10150 3bb269aca6a634b4f25b2b9e60546bcb 384 PRINTS PR00142 RecA protein signature 179 208 1.6E-81 T 25-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 SMA_RS10150 3bb269aca6a634b4f25b2b9e60546bcb 384 PRINTS PR00142 RecA protein signature 261 290 1.6E-81 T 25-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 SMA_RS10150 3bb269aca6a634b4f25b2b9e60546bcb 384 PRINTS PR00142 RecA protein signature 107 136 1.6E-81 T 25-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 SMA_RS10150 3bb269aca6a634b4f25b2b9e60546bcb 384 PRINTS PR00142 RecA protein signature 224 252 1.6E-81 T 25-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 SMA_RS10150 3bb269aca6a634b4f25b2b9e60546bcb 384 PRINTS PR00142 RecA protein signature 141 170 1.6E-81 T 25-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 SMA_RS10150 3bb269aca6a634b4f25b2b9e60546bcb 384 PRINTS PR00142 RecA protein signature 315 332 1.6E-81 T 25-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 SMA_RS10150 3bb269aca6a634b4f25b2b9e60546bcb 384 Gene3D G3DSA:3.40.50.300 40 285 3.2E-74 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS10150 3bb269aca6a634b4f25b2b9e60546bcb 384 Pfam PF00154 recA bacterial DNA recombination protein 21 286 4.7E-139 T 25-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 SMA_RS10150 3bb269aca6a634b4f25b2b9e60546bcb 384 PANTHER PTHR22942 17 353 2.6E-194 T 25-04-2016 SMA_RS10150 3bb269aca6a634b4f25b2b9e60546bcb 384 SMART SM00382 71 242 7.2E-8 T 25-04-2016 IPR003593 AAA+ ATPase domain SMA_RS10150 3bb269aca6a634b4f25b2b9e60546bcb 384 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 18 341 3.4E-161 T 25-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 SMA_RS10150 3bb269aca6a634b4f25b2b9e60546bcb 384 Hamap MF_00268 Protein RecA [recA]. 19 347 50.656 T 25-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 SMA_RS10150 3bb269aca6a634b4f25b2b9e60546bcb 384 Gene3D G3DSA:3.30.250.10 286 344 1.5E-26 T 25-04-2016 IPR023400 DNA recombination and repair protein RecA, C-terminal SMA_RS05710 a8a18553845ce5f2e83b29409636a6cc 105 PANTHER PTHR34382 1 105 7.4E-68 T 25-04-2016 SMA_RS05710 a8a18553845ce5f2e83b29409636a6cc 105 PIRSF PIRSF000699 1 105 3.8E-39 T 25-04-2016 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SMA_RS05710 a8a18553845ce5f2e83b29409636a6cc 105 Pfam PF02255 PTS system, Lactose/Cellobiose specific IIA subunit 10 101 7.1E-33 T 25-04-2016 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SMA_RS05710 a8a18553845ce5f2e83b29409636a6cc 105 PANTHER PTHR34382:SF3 1 105 7.4E-68 T 25-04-2016 SMA_RS05710 a8a18553845ce5f2e83b29409636a6cc 105 SUPERFAMILY SSF46973 1 102 2.22E-33 T 25-04-2016 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SMA_RS05710 a8a18553845ce5f2e83b29409636a6cc 105 Gene3D G3DSA:1.20.58.80 2 102 2.1E-36 T 25-04-2016 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SMA_RS05710 a8a18553845ce5f2e83b29409636a6cc 105 TIGRFAM TIGR00823 EIIA-LAC: PTS system, lactose-specific IIa component 4 102 4.6E-47 T 25-04-2016 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SMA_RS07240 5ae3c398ea6d5ebab8827b67331c9d5a 186 Gene3D G3DSA:1.10.150.240 16 79 4.3E-30 T 25-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 SMA_RS07240 5ae3c398ea6d5ebab8827b67331c9d5a 186 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 175 1.9E-22 T 25-04-2016 IPR023214 HAD-like domain SMA_RS07240 5ae3c398ea6d5ebab8827b67331c9d5a 186 PANTHER PTHR18901 1 175 1.5E-24 T 25-04-2016 SMA_RS07240 5ae3c398ea6d5ebab8827b67331c9d5a 186 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 6 169 8.0E-14 T 25-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SMA_RS07240 5ae3c398ea6d5ebab8827b67331c9d5a 186 PANTHER PTHR18901:SF14 1 175 1.5E-24 T 25-04-2016 SMA_RS07240 5ae3c398ea6d5ebab8827b67331c9d5a 186 Gene3D G3DSA:3.40.50.1000 1 15 7.3E-28 T 25-04-2016 IPR023214 HAD-like domain SMA_RS07240 5ae3c398ea6d5ebab8827b67331c9d5a 186 Gene3D G3DSA:3.40.50.1000 80 180 7.3E-28 T 25-04-2016 IPR023214 HAD-like domain SMA_RS07240 5ae3c398ea6d5ebab8827b67331c9d5a 186 SUPERFAMILY SSF56784 1 181 7.41E-37 T 25-04-2016 IPR023214 HAD-like domain SMA_RS09150 72d30d26010697bfccce95434de2a952 479 TIGRFAM TIGR01317 GOGAT_sm_gam: glutamate synthase, NADH/NADPH, small subunit 4 472 8.6E-177 T 25-04-2016 IPR006005 Glutamate synthase, NADH/NADPH, small subunit 1 GO:0006537|GO:0016639|GO:0055114 SMA_RS09150 72d30d26010697bfccce95434de2a952 479 Gene3D G3DSA:3.50.50.60 158 254 1.5E-33 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMA_RS09150 72d30d26010697bfccce95434de2a952 479 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 25 142 1.3E-20 T 25-04-2016 IPR028261 Dihydroprymidine dehydrogenase domain II SMA_RS09150 72d30d26010697bfccce95434de2a952 479 Gene3D G3DSA:3.50.50.60 408 473 1.9E-13 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMA_RS09150 72d30d26010697bfccce95434de2a952 479 SUPERFAMILY SSF51905 372 474 1.29E-9 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMA_RS09150 72d30d26010697bfccce95434de2a952 479 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 156 462 6.2E-26 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMA_RS09150 72d30d26010697bfccce95434de2a952 479 Gene3D G3DSA:3.50.50.60 255 407 2.0E-35 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMA_RS09150 72d30d26010697bfccce95434de2a952 479 SUPERFAMILY SSF46548 5 166 4.03E-31 T 25-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 SMA_RS09150 72d30d26010697bfccce95434de2a952 479 PANTHER PTHR11938 26 330 8.6E-130 T 25-04-2016 SMA_RS09150 72d30d26010697bfccce95434de2a952 479 PANTHER PTHR11938 346 476 8.6E-130 T 25-04-2016 SMA_RS09150 72d30d26010697bfccce95434de2a952 479 PRINTS PR00419 Adrenodoxin reductase family signature 297 311 8.3E-24 T 25-04-2016 SMA_RS09150 72d30d26010697bfccce95434de2a952 479 PRINTS PR00419 Adrenodoxin reductase family signature 157 179 8.3E-24 T 25-04-2016 SMA_RS09150 72d30d26010697bfccce95434de2a952 479 PRINTS PR00419 Adrenodoxin reductase family signature 180 193 8.3E-24 T 25-04-2016 SMA_RS09150 72d30d26010697bfccce95434de2a952 479 PRINTS PR00419 Adrenodoxin reductase family signature 222 232 8.3E-24 T 25-04-2016 SMA_RS09150 72d30d26010697bfccce95434de2a952 479 Gene3D G3DSA:1.10.1060.10 3 157 9.5E-37 T 25-04-2016 SMA_RS09150 72d30d26010697bfccce95434de2a952 479 SUPERFAMILY SSF51971 154 415 1.71E-64 T 25-04-2016 SMA_RS09150 72d30d26010697bfccce95434de2a952 479 PANTHER PTHR11938:SF75 26 330 8.6E-130 T 25-04-2016 SMA_RS09150 72d30d26010697bfccce95434de2a952 479 PANTHER PTHR11938:SF75 346 476 8.6E-130 T 25-04-2016 SMA_RS08240 8637a459c56251407a034c8ce5dd7201 218 Pfam PF01569 PAP2 superfamily 90 208 1.3E-22 T 25-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase SMA_RS08240 8637a459c56251407a034c8ce5dd7201 218 Gene3D G3DSA:1.20.144.10 44 208 5.7E-35 T 25-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase SMA_RS08240 8637a459c56251407a034c8ce5dd7201 218 SUPERFAMILY SSF48317 9 212 1.7E-38 T 25-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase SMA_RS08240 8637a459c56251407a034c8ce5dd7201 218 SMART SM00014 88 201 7.7E-22 T 25-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase SMA_RS08240 8637a459c56251407a034c8ce5dd7201 218 PANTHER PTHR14969 32 206 8.4E-27 T 25-04-2016 SMA_RS03995 c5c16f91bb3b5c007c35c039e2494e3f 467 PIRSF PIRSF006060 2 467 7.6E-77 T 25-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 SMA_RS03995 c5c16f91bb3b5c007c35c039e2494e3f 467 Pfam PF13520 Amino acid permease 20 428 1.4E-45 T 25-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 SMA_RS03995 c5c16f91bb3b5c007c35c039e2494e3f 467 PANTHER PTHR11785:SF342 16 460 2.3E-124 T 25-04-2016 SMA_RS03995 c5c16f91bb3b5c007c35c039e2494e3f 467 PANTHER PTHR11785 16 460 2.3E-124 T 25-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 SMA_RS03935 0f40fbf29ca2b2949281260ce56ebb68 289 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 2 286 7.5E-154 T 25-04-2016 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 SMA_RS03935 0f40fbf29ca2b2949281260ce56ebb68 289 Gene3D G3DSA:3.90.550.10 1 263 3.1E-71 T 25-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SMA_RS03935 0f40fbf29ca2b2949281260ce56ebb68 289 Pfam PF00483 Nucleotidyl transferase 2 237 2.0E-73 T 25-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 SMA_RS03935 0f40fbf29ca2b2949281260ce56ebb68 289 PANTHER PTHR22572:SF105 2 266 2.5E-183 T 25-04-2016 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 SMA_RS03935 0f40fbf29ca2b2949281260ce56ebb68 289 SUPERFAMILY SSF53448 1 286 1.6E-93 T 25-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SMA_RS03935 0f40fbf29ca2b2949281260ce56ebb68 289 PANTHER PTHR22572 2 266 2.5E-183 T 25-04-2016 SMA_RS07030 e10cec516fb7ad4be335e115f2d2f373 158 Gene3D G3DSA:3.40.50.300 4 157 1.8E-46 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS07030 e10cec516fb7ad4be335e115f2d2f373 158 Hamap MF_00109 Shikimate kinase [aroK]. 1 158 22.878 T 25-04-2016 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 SMA_RS07030 e10cec516fb7ad4be335e115f2d2f373 158 ProSitePatterns PS01128 Shikimate kinase signature. 52 76 - T 25-04-2016 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 SMA_RS07030 e10cec516fb7ad4be335e115f2d2f373 158 PRINTS PR01100 Shikimate kinase family signature 89 106 2.2E-20 T 25-04-2016 SMA_RS07030 e10cec516fb7ad4be335e115f2d2f373 158 PRINTS PR01100 Shikimate kinase family signature 3 18 2.2E-20 T 25-04-2016 SMA_RS07030 e10cec516fb7ad4be335e115f2d2f373 158 PRINTS PR01100 Shikimate kinase family signature 23 36 2.2E-20 T 25-04-2016 SMA_RS07030 e10cec516fb7ad4be335e115f2d2f373 158 PRINTS PR01100 Shikimate kinase family signature 68 77 2.2E-20 T 25-04-2016 SMA_RS07030 e10cec516fb7ad4be335e115f2d2f373 158 PRINTS PR01100 Shikimate kinase family signature 51 59 2.2E-20 T 25-04-2016 SMA_RS07030 e10cec516fb7ad4be335e115f2d2f373 158 PANTHER PTHR21087 5 157 3.8E-46 T 25-04-2016 SMA_RS07030 e10cec516fb7ad4be335e115f2d2f373 158 SUPERFAMILY SSF52540 4 157 8.65E-25 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS07030 e10cec516fb7ad4be335e115f2d2f373 158 Pfam PF01202 Shikimate kinase 9 157 8.5E-42 T 25-04-2016 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 SMA_RS05215 3e3bfef1ce972af3166162ab4cdb2dca 248 SUPERFAMILY SSF63817 55 223 5.49E-42 T 25-04-2016 IPR023365 Sortase domain SMA_RS05215 3e3bfef1ce972af3166162ab4cdb2dca 248 PANTHER PTHR33393 27 246 1.4E-37 T 25-04-2016 SMA_RS05215 3e3bfef1ce972af3166162ab4cdb2dca 248 PANTHER PTHR33393:SF3 27 246 1.4E-37 T 25-04-2016 SMA_RS05215 3e3bfef1ce972af3166162ab4cdb2dca 248 TIGRFAM TIGR01076 sortase_fam: sortase 96 221 1.8E-18 T 25-04-2016 IPR005754 Sortase family SMA_RS05215 3e3bfef1ce972af3166162ab4cdb2dca 248 Gene3D G3DSA:2.40.260.10 85 224 8.0E-41 T 25-04-2016 IPR023365 Sortase domain SMA_RS05215 3e3bfef1ce972af3166162ab4cdb2dca 248 Pfam PF04203 Sortase family 97 222 2.8E-28 T 25-04-2016 IPR005754 Sortase family SMA_RS08235 00df4380cac226d8097b481408ffcc3b 313 PANTHER PTHR11135:SF1 1 303 6.4E-149 T 25-04-2016 IPR005911 Protein YhcC-like GO:0051536 SMA_RS08235 00df4380cac226d8097b481408ffcc3b 313 TIGRFAM TIGR01212 TIGR01212: radical SAM protein, TIGR01212 family 4 307 2.0E-106 T 25-04-2016 IPR005911 Protein YhcC-like GO:0051536 SMA_RS08235 00df4380cac226d8097b481408ffcc3b 313 PANTHER PTHR11135 1 303 6.4E-149 T 25-04-2016 SMA_RS08235 00df4380cac226d8097b481408ffcc3b 313 SUPERFAMILY SSF102114 9 301 7.19E-47 T 25-04-2016 SMA_RS08235 00df4380cac226d8097b481408ffcc3b 313 Pfam PF04055 Radical SAM superfamily 41 205 1.2E-14 T 25-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 SMA_RS08235 00df4380cac226d8097b481408ffcc3b 313 Pfam PF16199 Radical_SAM C-terminal domain 213 296 1.6E-25 T 25-04-2016 IPR032432 Radical SAM, C-terminal extension SMA_RS08235 00df4380cac226d8097b481408ffcc3b 313 Gene3D G3DSA:3.80.30.20 22 253 1.3E-28 T 25-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe SMA_RS08235 00df4380cac226d8097b481408ffcc3b 313 SMART SM00729 21 252 1.3E-30 T 25-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 SMA_RS04770 85a69174320ef49290106ad8c3a71ea5 332 PIRSF PIRSF000428 1 329 2.2E-110 T 25-04-2016 IPR012147 Phosphate acetyl/butyryltransferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 SMA_RS04770 85a69174320ef49290106ad8c3a71ea5 332 Gene3D G3DSA:3.40.50.10750 138 299 3.8E-69 T 25-04-2016 SMA_RS04770 85a69174320ef49290106ad8c3a71ea5 332 TIGRFAM TIGR00651 pta: phosphate acetyltransferase 21 323 1.7E-119 T 25-04-2016 IPR004614 Phosphate acetyltransferase GO:0016407 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 SMA_RS04770 85a69174320ef49290106ad8c3a71ea5 332 PANTHER PTHR23406 1 328 2.4E-48 T 25-04-2016 SMA_RS04770 85a69174320ef49290106ad8c3a71ea5 332 SUPERFAMILY SSF53659 7 326 3.87E-98 T 25-04-2016 SMA_RS04770 85a69174320ef49290106ad8c3a71ea5 332 Pfam PF01515 Phosphate acetyl/butaryl transferase 11 323 7.1E-121 T 25-04-2016 IPR002505 Phosphate acetyl/butaryl transferase GO:0008152|GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 SMA_RS04770 85a69174320ef49290106ad8c3a71ea5 332 PANTHER PTHR23406:SF3 1 328 2.4E-48 T 25-04-2016 SMA_RS05975 2ab7a8a32543754f5251fe73df6cbe54 208 Gene3D G3DSA:1.10.3720.10 9 200 4.3E-23 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SMA_RS05975 2ab7a8a32543754f5251fe73df6cbe54 208 SUPERFAMILY SSF161098 10 193 2.75E-31 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SMA_RS05975 2ab7a8a32543754f5251fe73df6cbe54 208 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 38 201 2.5E-17 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SMA_RS05975 2ab7a8a32543754f5251fe73df6cbe54 208 PANTHER PTHR30177:SF4 1 204 1.3E-49 T 25-04-2016 SMA_RS05975 2ab7a8a32543754f5251fe73df6cbe54 208 PANTHER PTHR30177 1 204 1.3E-49 T 25-04-2016 SMA_RS02450 0325f29d3abe45d991daba5b7e5c1f75 98 SUPERFAMILY SSF51735 27 91 2.12E-17 T 25-04-2016 IPR016040 NAD(P)-binding domain SMA_RS02450 0325f29d3abe45d991daba5b7e5c1f75 98 Pfam PF00106 short chain dehydrogenase 27 91 3.2E-15 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMA_RS02450 0325f29d3abe45d991daba5b7e5c1f75 98 Gene3D G3DSA:3.40.50.720 27 91 7.5E-19 T 25-04-2016 IPR016040 NAD(P)-binding domain SMA_RS02450 0325f29d3abe45d991daba5b7e5c1f75 98 PANTHER PTHR24322:SF347 31 91 2.8E-13 T 25-04-2016 SMA_RS02450 0325f29d3abe45d991daba5b7e5c1f75 98 PANTHER PTHR24322 31 91 2.8E-13 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMA_RS08730 fe1078f8ffa3ab5b96401cdbe0b697c8 167 Pfam PF11188 Protein of unknown function (DUF2975) 67 167 1.4E-9 T 25-04-2016 IPR021354 Protein of unknown function DUF2975 SMA_RS04870 907878f0bbd1d3f0c5811d035f7c751a 416 SUPERFAMILY SSF53383 5 416 6.4E-174 T 25-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SMA_RS04870 907878f0bbd1d3f0c5811d035f7c751a 416 PANTHER PTHR11680 9 416 3.8E-238 T 25-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 SMA_RS04870 907878f0bbd1d3f0c5811d035f7c751a 416 Gene3D G3DSA:3.90.1150.10 284 416 4.1E-47 T 25-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SMA_RS04870 907878f0bbd1d3f0c5811d035f7c751a 416 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 222 238 - T 25-04-2016 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0004372|GO:0006544|GO:0006563|GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 SMA_RS04870 907878f0bbd1d3f0c5811d035f7c751a 416 PIRSF PIRSF000412 1 416 2.4E-161 T 25-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 SMA_RS04870 907878f0bbd1d3f0c5811d035f7c751a 416 Gene3D G3DSA:3.40.640.10 37 283 2.4E-107 T 25-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SMA_RS04870 907878f0bbd1d3f0c5811d035f7c751a 416 Pfam PF00464 Serine hydroxymethyltransferase 10 386 3.3E-169 T 25-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 SMA_RS04870 907878f0bbd1d3f0c5811d035f7c751a 416 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 7 416 51.163 T 25-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 SMA_RS04865 4a8f440bb837bfb489198641b99bb1ad 199 PANTHER PTHR17490 7 193 9.8E-59 T 25-04-2016 SMA_RS04865 4a8f440bb837bfb489198641b99bb1ad 199 Pfam PF01300 Telomere recombination 7 180 8.1E-47 T 25-04-2016 IPR006070 YrdC-like domain GO:0003725 SMA_RS04865 4a8f440bb837bfb489198641b99bb1ad 199 Gene3D G3DSA:3.90.870.10 6 187 3.9E-58 T 25-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain SMA_RS04865 4a8f440bb837bfb489198641b99bb1ad 199 SUPERFAMILY SSF55821 6 193 8.24E-55 T 25-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain SMA_RS04865 4a8f440bb837bfb489198641b99bb1ad 199 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 6 185 1.0E-47 T 25-04-2016 IPR006070 YrdC-like domain GO:0003725 SMA_RS05970 3de99c8921e65fead0455ffd4603eb53 207 Pfam PF04607 Region found in RelA / SpoT proteins 45 169 5.6E-36 T 25-04-2016 IPR007685 RelA/SpoT GO:0015969 SMA_RS05970 3de99c8921e65fead0455ffd4603eb53 207 PANTHER PTHR21262:SF11 46 203 3.1E-38 T 25-04-2016 SMA_RS05970 3de99c8921e65fead0455ffd4603eb53 207 Gene3D G3DSA:1.10.287.860 155 204 5.2E-21 T 25-04-2016 SMA_RS05970 3de99c8921e65fead0455ffd4603eb53 207 Gene3D G3DSA:3.30.460.10 14 152 1.1E-33 T 25-04-2016 SMA_RS05970 3de99c8921e65fead0455ffd4603eb53 207 PANTHER PTHR21262 46 203 3.1E-38 T 25-04-2016 SMA_RS05970 3de99c8921e65fead0455ffd4603eb53 207 SUPERFAMILY SSF81301 26 204 7.36E-50 T 25-04-2016 SMA_RS05970 3de99c8921e65fead0455ffd4603eb53 207 SMART SM00954 45 172 8.4E-43 T 25-04-2016 IPR007685 RelA/SpoT GO:0015969 SMA_RS03265 b1c25cffa142fafa2d9163c4369ce883 454 Gene3D G3DSA:3.40.1390.10 1 78 5.2E-22 T 25-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 SMA_RS03265 b1c25cffa142fafa2d9163c4369ce883 454 SUPERFAMILY SSF53623 101 302 3.92E-47 T 25-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SMA_RS03265 b1c25cffa142fafa2d9163c4369ce883 454 Pfam PF08245 Mur ligase middle domain 105 284 9.3E-45 T 25-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SMA_RS03265 b1c25cffa142fafa2d9163c4369ce883 454 SUPERFAMILY SSF53244 306 452 2.75E-31 T 25-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SMA_RS03265 b1c25cffa142fafa2d9163c4369ce883 454 PANTHER PTHR23135:SF3 14 453 9.8E-152 T 25-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SMA_RS03265 b1c25cffa142fafa2d9163c4369ce883 454 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 3 453 32.902 T 25-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SMA_RS03265 b1c25cffa142fafa2d9163c4369ce883 454 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 31 452 9.6E-114 T 25-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SMA_RS03265 b1c25cffa142fafa2d9163c4369ce883 454 Pfam PF01225 Mur ligase family, catalytic domain 28 93 7.0E-8 T 25-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 SMA_RS03265 b1c25cffa142fafa2d9163c4369ce883 454 Gene3D G3DSA:3.90.190.20 305 453 9.9E-37 T 25-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SMA_RS03265 b1c25cffa142fafa2d9163c4369ce883 454 PANTHER PTHR23135 14 453 9.8E-152 T 25-04-2016 SMA_RS03265 b1c25cffa142fafa2d9163c4369ce883 454 SUPERFAMILY SSF63418 2 96 5.49E-22 T 25-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 SMA_RS03265 b1c25cffa142fafa2d9163c4369ce883 454 Pfam PF02875 Mur ligase family, glutamate ligase domain 307 389 2.9E-10 T 25-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SMA_RS03265 b1c25cffa142fafa2d9163c4369ce883 454 Gene3D G3DSA:3.40.1190.10 81 302 1.8E-60 T 25-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SMA_RS08375 1841b65a4bea93be8a6d44c5aa3c7657 298 SUPERFAMILY SSF53098 179 287 2.85E-15 T 25-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMA_RS08375 1841b65a4bea93be8a6d44c5aa3c7657 298 Pfam PF13936 Helix-turn-helix domain 2 45 1.1E-13 T 25-04-2016 IPR025246 Transposase IS30-like HTH domain SMA_RS08375 1841b65a4bea93be8a6d44c5aa3c7657 298 PANTHER PTHR10948 1 291 7.6E-60 T 25-04-2016 SMA_RS08375 1841b65a4bea93be8a6d44c5aa3c7657 298 Pfam PF00665 Integrase core domain 181 281 4.3E-11 T 25-04-2016 IPR001584 Integrase, catalytic core GO:0015074 SMA_RS08375 1841b65a4bea93be8a6d44c5aa3c7657 298 Gene3D G3DSA:3.30.420.10 181 285 5.5E-7 T 25-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMA_RS08375 1841b65a4bea93be8a6d44c5aa3c7657 298 ProSitePatterns PS01043 Transposases, IS30 family, signature. 268 284 - T 25-04-2016 IPR001598 Transposase, IS30, conserved site GO:0003677|GO:0004803|GO:0006313 SMA_RS08115 b0f183867670f8ae3cc28f483f2f114a 297 SUPERFAMILY SSF103481 179 284 1.44E-16 T 25-04-2016 SMA_RS08115 b0f183867670f8ae3cc28f483f2f114a 297 PANTHER PTHR12715 15 289 3.6E-42 T 25-04-2016 SMA_RS08115 b0f183867670f8ae3cc28f483f2f114a 297 SUPERFAMILY SSF103481 40 139 8.5E-8 T 25-04-2016 SMA_RS08115 b0f183867670f8ae3cc28f483f2f114a 297 Pfam PF00892 EamA-like transporter family 11 136 5.4E-12 T 25-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 SMA_RS08115 b0f183867670f8ae3cc28f483f2f114a 297 Pfam PF00892 EamA-like transporter family 145 279 1.4E-20 T 25-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 SMA_RS04200 a47cd0c156696df410b56b0dda7fb8d5 150 Gene3D G3DSA:3.20.20.100 3 132 2.7E-37 T 25-04-2016 IPR023210 NADP-dependent oxidoreductase domain SMA_RS04200 a47cd0c156696df410b56b0dda7fb8d5 150 PANTHER PTHR11732:SF236 3 150 1.5E-56 T 25-04-2016 SMA_RS04200 a47cd0c156696df410b56b0dda7fb8d5 150 PRINTS PR00069 Aldo-keto reductase signature 62 86 3.4E-8 T 25-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 SMA_RS04200 a47cd0c156696df410b56b0dda7fb8d5 150 PRINTS PR00069 Aldo-keto reductase signature 23 52 3.4E-8 T 25-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 SMA_RS04200 a47cd0c156696df410b56b0dda7fb8d5 150 PANTHER PTHR11732 3 150 1.5E-56 T 25-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta SMA_RS04200 a47cd0c156696df410b56b0dda7fb8d5 150 ProSitePatterns PS00063 Aldo/keto reductase family putative active site signature. 95 110 - T 25-04-2016 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 SMA_RS04200 a47cd0c156696df410b56b0dda7fb8d5 150 Pfam PF00248 Aldo/keto reductase family 3 125 1.5E-13 T 25-04-2016 IPR023210 NADP-dependent oxidoreductase domain SMA_RS04200 a47cd0c156696df410b56b0dda7fb8d5 150 SUPERFAMILY SSF51430 3 130 2.49E-33 T 25-04-2016 IPR023210 NADP-dependent oxidoreductase domain SMA_RS04650 027898d1e81bef575b1087b6c4ed52b1 418 Pfam PF01610 Transposase 157 400 2.6E-55 T 25-04-2016 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain SMA_RS04650 027898d1e81bef575b1087b6c4ed52b1 418 PANTHER PTHR33498:SF1 1 414 2.3E-149 T 25-04-2016 SMA_RS04650 027898d1e81bef575b1087b6c4ed52b1 418 PANTHER PTHR33498 1 414 2.3E-149 T 25-04-2016 SMA_RS04650 027898d1e81bef575b1087b6c4ed52b1 418 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 41 85 3.7E-11 T 25-04-2016 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger SMA_RS04650 027898d1e81bef575b1087b6c4ed52b1 418 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 91 141 1.7E-8 T 25-04-2016 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain SMA_RS09130 119210dd666a58939c5b935b9f2684ca 229 SUPERFAMILY SSF53067 1 102 3.28E-29 T 25-04-2016 SMA_RS09130 119210dd666a58939c5b935b9f2684ca 229 Pfam PF00814 Glycoprotease family 31 143 7.1E-31 T 25-04-2016 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 SMA_RS09130 119210dd666a58939c5b935b9f2684ca 229 Gene3D G3DSA:3.30.420.40 1 127 2.4E-41 T 25-04-2016 SMA_RS09130 119210dd666a58939c5b935b9f2684ca 229 PANTHER PTHR11735 1 127 2.0E-46 T 25-04-2016 SMA_RS09130 119210dd666a58939c5b935b9f2684ca 229 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 3 205 2.1E-55 T 25-04-2016 IPR022496 tRNA threonylcarbamoyl adenosine modification protein YeaZ GO:0002949 SMA_RS09130 119210dd666a58939c5b935b9f2684ca 229 SUPERFAMILY SSF53067 107 203 2.2E-9 T 25-04-2016 SMA_RS09130 119210dd666a58939c5b935b9f2684ca 229 PANTHER PTHR11735:SF11 1 127 2.0E-46 T 25-04-2016 SMA_RS01840 941a91f7a9db687fcc6494dfaefd7fe1 391 ProSitePatterns PS01007 Transposases, Mutator family, signature. 228 252 - T 25-04-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 SMA_RS01840 941a91f7a9db687fcc6494dfaefd7fe1 391 PANTHER PTHR33217:SF1 1 376 7.3E-96 T 25-04-2016 SMA_RS01840 941a91f7a9db687fcc6494dfaefd7fe1 391 Pfam PF00872 Transposase, Mutator family 7 370 1.2E-145 T 25-04-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 SMA_RS01840 941a91f7a9db687fcc6494dfaefd7fe1 391 PANTHER PTHR33217 1 376 7.3E-96 T 25-04-2016 SMA_RS05465 14f355fab284a39ff83d176fc23c343c 771 Pfam PF00580 UvrD/REP helicase N-terminal domain 8 270 1.6E-81 T 25-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 SMA_RS05465 14f355fab284a39ff83d176fc23c343c 771 Gene3D G3DSA:1.10.10.160 112 185 7.4E-26 T 25-04-2016 IPR013986 DExx box DNA helicase domain SMA_RS05465 14f355fab284a39ff83d176fc23c343c 771 Gene3D G3DSA:1.10.486.10 387 543 1.7E-43 T 25-04-2016 SMA_RS05465 14f355fab284a39ff83d176fc23c343c 771 TIGRFAM TIGR01073 pcrA: ATP-dependent DNA helicase PcrA 4 769 0.0 T 25-04-2016 IPR005751 ATP-dependent DNA helicase PcrA GO:0004003|GO:0005737|GO:0006268 SMA_RS05465 14f355fab284a39ff83d176fc23c343c 771 SUPERFAMILY SSF52540 2 645 6.24E-176 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS05465 14f355fab284a39ff83d176fc23c343c 771 PANTHER PTHR11070:SF7 1 513 3.5E-230 T 25-04-2016 SMA_RS05465 14f355fab284a39ff83d176fc23c343c 771 PANTHER PTHR11070:SF7 532 654 3.5E-230 T 25-04-2016 SMA_RS05465 14f355fab284a39ff83d176fc23c343c 771 Pfam PF13361 UvrD-like helicase C-terminal domain 276 619 2.1E-76 T 25-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 SMA_RS05465 14f355fab284a39ff83d176fc23c343c 771 Gene3D G3DSA:3.40.50.300 3 107 1.4E-73 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS05465 14f355fab284a39ff83d176fc23c343c 771 Gene3D G3DSA:3.40.50.300 186 284 1.4E-73 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS05465 14f355fab284a39ff83d176fc23c343c 771 PANTHER PTHR11070 1 513 3.5E-230 T 25-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 SMA_RS05465 14f355fab284a39ff83d176fc23c343c 771 PANTHER PTHR11070 532 654 3.5E-230 T 25-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 SMA_RS05465 14f355fab284a39ff83d176fc23c343c 771 Gene3D G3DSA:3.40.50.300 555 645 2.8E-72 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS05465 14f355fab284a39ff83d176fc23c343c 771 Gene3D G3DSA:3.40.50.300 285 386 2.8E-72 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS00030 4710aeb20e4adddf2cf856840b0e61c3 189 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 3 188 1.4E-68 T 25-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 SMA_RS00030 4710aeb20e4adddf2cf856840b0e61c3 189 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 2 180 38.467 T 25-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 SMA_RS00030 4710aeb20e4adddf2cf856840b0e61c3 189 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 109 119 - T 25-04-2016 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 SMA_RS00030 4710aeb20e4adddf2cf856840b0e61c3 189 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 15 28 - T 25-04-2016 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 SMA_RS00030 4710aeb20e4adddf2cf856840b0e61c3 189 PANTHER PTHR17224:SF1 3 188 2.0E-79 T 25-04-2016 SMA_RS00030 4710aeb20e4adddf2cf856840b0e61c3 189 Gene3D G3DSA:3.40.50.1470 1 188 1.9E-73 T 25-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 SMA_RS00030 4710aeb20e4adddf2cf856840b0e61c3 189 Pfam PF01195 Peptidyl-tRNA hydrolase 4 187 3.5E-60 T 25-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 SMA_RS00030 4710aeb20e4adddf2cf856840b0e61c3 189 SUPERFAMILY SSF53178 1 188 2.35E-69 T 25-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 SMA_RS00030 4710aeb20e4adddf2cf856840b0e61c3 189 PANTHER PTHR17224 3 188 2.0E-79 T 25-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 SMA_RS07530 4054010bfd4c0c399416a2d9f1eca937 308 PANTHER PTHR30217 1 307 7.5E-137 T 25-04-2016 SMA_RS07530 4054010bfd4c0c399416a2d9f1eca937 308 Pfam PF01136 Peptidase family U32 75 304 7.6E-40 T 25-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- SMA_RS07530 4054010bfd4c0c399416a2d9f1eca937 308 PANTHER PTHR30217:SF7 1 307 7.5E-137 T 25-04-2016 SMA_RS03245 6a6dbacda394a2d24a01ede18a64bbcc 717 Gene3D G3DSA:3.90.1310.10 229 343 2.6E-27 T 25-04-2016 SMA_RS03245 6a6dbacda394a2d24a01ede18a64bbcc 717 Gene3D G3DSA:3.40.710.10 344 714 1.8E-64 T 25-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SMA_RS03245 6a6dbacda394a2d24a01ede18a64bbcc 717 PANTHER PTHR30627 506 711 1.6E-143 T 25-04-2016 SMA_RS03245 6a6dbacda394a2d24a01ede18a64bbcc 717 PANTHER PTHR30627 196 487 1.6E-143 T 25-04-2016 SMA_RS03245 6a6dbacda394a2d24a01ede18a64bbcc 717 PANTHER PTHR30627 28 142 1.6E-143 T 25-04-2016 SMA_RS03245 6a6dbacda394a2d24a01ede18a64bbcc 717 Pfam PF03717 Penicillin-binding Protein dimerisation domain 91 328 7.6E-34 T 25-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 SMA_RS03245 6a6dbacda394a2d24a01ede18a64bbcc 717 SUPERFAMILY SSF56601 346 712 1.53E-57 T 25-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SMA_RS03245 6a6dbacda394a2d24a01ede18a64bbcc 717 Pfam PF00905 Penicillin binding protein transpeptidase domain 377 707 8.8E-67 T 25-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 SMA_RS03245 6a6dbacda394a2d24a01ede18a64bbcc 717 PANTHER PTHR30627:SF2 506 711 1.6E-143 T 25-04-2016 SMA_RS03245 6a6dbacda394a2d24a01ede18a64bbcc 717 PANTHER PTHR30627:SF2 196 487 1.6E-143 T 25-04-2016 SMA_RS03245 6a6dbacda394a2d24a01ede18a64bbcc 717 PANTHER PTHR30627:SF2 28 142 1.6E-143 T 25-04-2016 SMA_RS03245 6a6dbacda394a2d24a01ede18a64bbcc 717 SUPERFAMILY SSF56519 214 344 7.19E-31 T 25-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 SMA_RS03245 6a6dbacda394a2d24a01ede18a64bbcc 717 SUPERFAMILY SSF56519 83 147 7.19E-31 T 25-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 SMA_RS00230 3a450879d5afbe34d91e75e6536095f8 331 Gene3D G3DSA:3.40.718.10 1 327 2.7E-133 T 25-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 SMA_RS00230 3a450879d5afbe34d91e75e6536095f8 331 Pfam PF02504 Fatty acid synthesis protein 3 320 9.7E-108 T 25-04-2016 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 UniPathway: UPA00085 SMA_RS00230 3a450879d5afbe34d91e75e6536095f8 331 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 331 147.463 T 25-04-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 SMA_RS00230 3a450879d5afbe34d91e75e6536095f8 331 SUPERFAMILY SSF53659 2 326 5.35E-103 T 25-04-2016 SMA_RS00230 3a450879d5afbe34d91e75e6536095f8 331 PANTHER PTHR30100:SF1 1 327 1.3E-128 T 25-04-2016 SMA_RS00230 3a450879d5afbe34d91e75e6536095f8 331 PIRSF PIRSF002465 1 330 1.0E-125 T 25-04-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 SMA_RS00230 3a450879d5afbe34d91e75e6536095f8 331 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 3 325 9.0E-118 T 25-04-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 SMA_RS00230 3a450879d5afbe34d91e75e6536095f8 331 PANTHER PTHR30100 1 327 1.3E-128 T 25-04-2016 SMA_RS10155 9f8a46eebc78eb619c30e16bb1f3fbc0 419 SUPERFAMILY SSF53218 1 204 5.89E-38 T 25-04-2016 IPR001453 MoaB/Mog domain SMA_RS10155 9f8a46eebc78eb619c30e16bb1f3fbc0 419 PIRSF PIRSF006728 1 419 3.6E-139 T 25-04-2016 IPR008135 Competence-induced protein CinA SMA_RS10155 9f8a46eebc78eb619c30e16bb1f3fbc0 419 Pfam PF00994 Probable molybdopterin binding domain 4 169 1.2E-29 T 25-04-2016 IPR001453 MoaB/Mog domain SMA_RS10155 9f8a46eebc78eb619c30e16bb1f3fbc0 419 PANTHER PTHR13939:SF0 1 418 5.5E-165 T 25-04-2016 SMA_RS10155 9f8a46eebc78eb619c30e16bb1f3fbc0 419 Pfam PF02464 Competence-damaged protein 263 416 2.2E-46 T 25-04-2016 IPR008136 CinA, C-terminal SMA_RS10155 9f8a46eebc78eb619c30e16bb1f3fbc0 419 SUPERFAMILY SSF142433 258 417 3.79E-46 T 25-04-2016 IPR008136 CinA, C-terminal SMA_RS10155 9f8a46eebc78eb619c30e16bb1f3fbc0 419 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 271 414 2.7E-33 T 25-04-2016 IPR008136 CinA, C-terminal SMA_RS10155 9f8a46eebc78eb619c30e16bb1f3fbc0 419 TIGRFAM TIGR00200 cinA_nterm: competence/damage-inducible protein CinA N-terminal domain 1 416 1.0E-112 T 25-04-2016 IPR008135 Competence-induced protein CinA SMA_RS10155 9f8a46eebc78eb619c30e16bb1f3fbc0 419 Hamap MF_00226_B Putative competence-damage inducible protein [cinA]. 1 419 154.52 T 25-04-2016 IPR008135 Competence-induced protein CinA SMA_RS10155 9f8a46eebc78eb619c30e16bb1f3fbc0 419 SMART SM00852 4 171 1.3E-34 T 25-04-2016 IPR001453 MoaB/Mog domain SMA_RS10155 9f8a46eebc78eb619c30e16bb1f3fbc0 419 Gene3D G3DSA:3.90.950.20 259 417 4.3E-51 T 25-04-2016 IPR008136 CinA, C-terminal SMA_RS10155 9f8a46eebc78eb619c30e16bb1f3fbc0 419 Gene3D G3DSA:3.40.980.10 1 170 1.0E-32 T 25-04-2016 IPR001453 MoaB/Mog domain SMA_RS10155 9f8a46eebc78eb619c30e16bb1f3fbc0 419 PANTHER PTHR13939 1 418 5.5E-165 T 25-04-2016 SMA_RS02915 a0aee92f93979f806a1e7ed23abc5ff9 451 PANTHER PTHR11236 1 446 3.4E-204 T 25-04-2016 SMA_RS02915 a0aee92f93979f806a1e7ed23abc5ff9 451 Gene3D G3DSA:3.60.120.10 5 447 5.5E-150 T 25-04-2016 IPR005801 ADC synthase GO:0009058 SMA_RS02915 a0aee92f93979f806a1e7ed23abc5ff9 451 PRINTS PR00095 Anthranilate synthase component I signature 397 411 1.7E-21 T 25-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 SMA_RS02915 a0aee92f93979f806a1e7ed23abc5ff9 451 PRINTS PR00095 Anthranilate synthase component I signature 288 301 1.7E-21 T 25-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 SMA_RS02915 a0aee92f93979f806a1e7ed23abc5ff9 451 PRINTS PR00095 Anthranilate synthase component I signature 302 315 1.7E-21 T 25-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 SMA_RS02915 a0aee92f93979f806a1e7ed23abc5ff9 451 PRINTS PR00095 Anthranilate synthase component I signature 382 396 1.7E-21 T 25-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 SMA_RS02915 a0aee92f93979f806a1e7ed23abc5ff9 451 TIGRFAM TIGR00564 trpE_most: anthranilate synthase component I 7 447 2.9E-171 T 25-04-2016 IPR005256 Anthranilate synthase component I, PabB-like GO:0000162|GO:0004049 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 SMA_RS02915 a0aee92f93979f806a1e7ed23abc5ff9 451 SUPERFAMILY SSF56322 4 446 7.46E-143 T 25-04-2016 IPR005801 ADC synthase GO:0009058 SMA_RS02915 a0aee92f93979f806a1e7ed23abc5ff9 451 PANTHER PTHR11236:SF9 1 446 3.4E-204 T 25-04-2016 SMA_RS02915 a0aee92f93979f806a1e7ed23abc5ff9 451 Pfam PF04715 Anthranilate synthase component I, N terminal region 8 138 5.2E-31 T 25-04-2016 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058|GO:0016833 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 SMA_RS02915 a0aee92f93979f806a1e7ed23abc5ff9 451 Pfam PF00425 chorismate binding enzyme 187 440 5.9E-91 T 25-04-2016 IPR015890 Chorismate-utilising enzyme, C-terminal SMA_RS04245 e09d2197aaf52779d2fd9373689af7d3 458 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 228 235 - T 25-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 SMA_RS04245 e09d2197aaf52779d2fd9373689af7d3 458 PANTHER PTHR11699 1 455 5.1E-211 T 25-04-2016 SMA_RS04245 e09d2197aaf52779d2fd9373689af7d3 458 SUPERFAMILY SSF53720 4 455 6.41E-125 T 25-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 SMA_RS04245 e09d2197aaf52779d2fd9373689af7d3 458 PANTHER PTHR11699:SF205 1 455 5.1E-211 T 25-04-2016 SMA_RS04245 e09d2197aaf52779d2fd9373689af7d3 458 Pfam PF00171 Aldehyde dehydrogenase family 3 449 5.9E-120 T 25-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 SMA_RS04245 e09d2197aaf52779d2fd9373689af7d3 458 Gene3D G3DSA:3.40.309.10 240 428 1.0E-58 T 25-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 SMA_RS04245 e09d2197aaf52779d2fd9373689af7d3 458 Gene3D G3DSA:3.40.605.10 4 239 2.1E-58 T 25-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 SMA_RS03410 f5838aa057af1b87e430e4c3179dbc0f 244 PIRSF PIRSF000728 1 242 4.9E-72 T 25-04-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 SMA_RS03410 f5838aa057af1b87e430e4c3179dbc0f 244 Gene3D G3DSA:3.40.1160.10 1 235 3.6E-64 T 25-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SMA_RS03410 f5838aa057af1b87e430e4c3179dbc0f 244 Pfam PF00696 Amino acid kinase family 3 233 5.6E-40 T 25-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SMA_RS03410 f5838aa057af1b87e430e4c3179dbc0f 244 PANTHER PTHR23342 2 237 7.6E-52 T 25-04-2016 SMA_RS03410 f5838aa057af1b87e430e4c3179dbc0f 244 TIGRFAM TIGR00761 argB: acetylglutamate kinase 5 232 2.7E-68 T 25-04-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 SMA_RS03410 f5838aa057af1b87e430e4c3179dbc0f 244 PRINTS PR00474 Glutamate 5-kinase family signature 32 46 2.9E-6 T 25-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 SMA_RS03410 f5838aa057af1b87e430e4c3179dbc0f 244 PRINTS PR00474 Glutamate 5-kinase family signature 158 185 2.9E-6 T 25-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 SMA_RS03410 f5838aa057af1b87e430e4c3179dbc0f 244 Hamap MF_00082_B Acetylglutamate kinase [argB]. 1 244 25.614 T 25-04-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 SMA_RS03410 f5838aa057af1b87e430e4c3179dbc0f 244 SUPERFAMILY SSF53633 2 239 4.06E-52 T 25-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SMA_RS09965 bb2618d2cb2ea088d98492037eebfe64 165 Pfam PF01475 Ferric uptake regulator family 22 141 2.2E-35 T 25-04-2016 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 SMA_RS09965 bb2618d2cb2ea088d98492037eebfe64 165 PANTHER PTHR33202:SF7 14 150 2.6E-36 T 25-04-2016 SMA_RS09965 bb2618d2cb2ea088d98492037eebfe64 165 PANTHER PTHR33202 14 150 2.6E-36 T 25-04-2016 SMA_RS09965 bb2618d2cb2ea088d98492037eebfe64 165 Gene3D G3DSA:1.10.10.10 14 91 4.0E-24 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMA_RS09965 bb2618d2cb2ea088d98492037eebfe64 165 SUPERFAMILY SSF46785 14 145 4.49E-37 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMA_RS04500 5f18e86c19b94132cbc8bc55feaa4e9b 212 SMART SM01207 8 193 2.5E-79 T 25-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 SMA_RS04500 5f18e86c19b94132cbc8bc55feaa4e9b 212 PANTHER PTHR30309 1 210 3.1E-79 T 25-04-2016 SMA_RS04500 5f18e86c19b94132cbc8bc55feaa4e9b 212 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 5 201 19.539 T 25-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 SMA_RS04500 5f18e86c19b94132cbc8bc55feaa4e9b 212 Pfam PF02660 Glycerol-3-phosphate acyltransferase 9 192 2.5E-51 T 25-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 SMA_RS04500 5f18e86c19b94132cbc8bc55feaa4e9b 212 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 3 200 2.3E-52 T 25-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 SMA_RS04500 5f18e86c19b94132cbc8bc55feaa4e9b 212 PANTHER PTHR30309:SF0 1 210 3.1E-79 T 25-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 SMA_RS01220 e51d6da5fbe7aeb742a5d8f45e802868 466 PANTHER PTHR37324 6 462 1.6E-88 T 25-04-2016 SMA_RS01220 e51d6da5fbe7aeb742a5d8f45e802868 466 Pfam PF03611 PTS system sugar-specific permease component 15 393 2.1E-51 T 25-04-2016 IPR004703 Phosphotransferase system, sugar-specific permease component GO:0009401|GO:0016021 SMA_RS01220 e51d6da5fbe7aeb742a5d8f45e802868 466 PIRSF PIRSF006304 8 466 5.0E-144 T 25-04-2016 IPR013853 Galactitol permease IIC component GO:0015577|GO:0015796 SMA_RS02175 46a393d6c9d49702f52bd6309ad7a294 212 SUPERFAMILY SSF53335 31 209 1.2E-29 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMA_RS02175 46a393d6c9d49702f52bd6309ad7a294 212 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 1 212 28.445 T 25-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 SMA_RS02175 46a393d6c9d49702f52bd6309ad7a294 212 PANTHER PTHR23417 1 212 5.4E-64 T 25-04-2016 SMA_RS02175 46a393d6c9d49702f52bd6309ad7a294 212 Gene3D G3DSA:3.40.50.150 44 167 6.5E-8 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMA_RS02175 46a393d6c9d49702f52bd6309ad7a294 212 PANTHER PTHR23417:SF14 1 212 5.4E-64 T 25-04-2016 SMA_RS02175 46a393d6c9d49702f52bd6309ad7a294 212 Pfam PF02390 Putative methyltransferase 38 206 8.6E-46 T 25-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 SMA_RS02175 46a393d6c9d49702f52bd6309ad7a294 212 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 28 209 1.6E-54 T 25-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 SMA_RS07505 1c764cfa320245285b06c9fae5e18124 175 PANTHER PTHR34295:SF1 4 174 1.1E-45 T 25-04-2016 SMA_RS07505 1c764cfa320245285b06c9fae5e18124 175 PANTHER PTHR34295 4 174 1.1E-45 T 25-04-2016 SMA_RS07505 1c764cfa320245285b06c9fae5e18124 175 PIRSF PIRSF016661 1 174 1.4E-41 T 25-04-2016 IPR003784 BioY protein GO:0005886|GO:0015225|GO:0015878 SMA_RS07505 1c764cfa320245285b06c9fae5e18124 175 Pfam PF02632 BioY family 26 162 6.7E-36 T 25-04-2016 IPR003784 BioY protein GO:0005886|GO:0015225|GO:0015878 SMA_RS09105 de5e0bd1a1a5f886861f314f9cd66252 56 Gene3D G3DSA:1.10.10.10 2 55 3.4E-9 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMA_RS09105 de5e0bd1a1a5f886861f314f9cd66252 56 SUPERFAMILY SSF46785 3 54 4.54E-7 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMA_RS07835 c2a70b52b60c600dc16c7080431f4711 356 PANTHER PTHR30473 6 338 2.7E-166 T 25-04-2016 SMA_RS07835 c2a70b52b60c600dc16c7080431f4711 356 Gene3D G3DSA:3.40.50.300 110 315 4.0E-88 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS07835 c2a70b52b60c600dc16c7080431f4711 356 SUPERFAMILY SSF52540 111 312 8.85E-40 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS07835 c2a70b52b60c600dc16c7080431f4711 356 Pfam PF02562 PhoH-like protein 112 315 1.2E-94 T 25-04-2016 IPR003714 PhoH-like protein GO:0005524 SMA_RS07835 c2a70b52b60c600dc16c7080431f4711 356 PANTHER PTHR30473:SF1 6 338 2.7E-166 T 25-04-2016 SMA_RS05330 768912c0967961c7e058346ce970527f 305 PANTHER PTHR30425 1 305 5.5E-160 T 25-04-2016 SMA_RS05330 768912c0967961c7e058346ce970527f 305 Gene3D G3DSA:1.10.3720.10 28 303 7.4E-44 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SMA_RS05330 768912c0967961c7e058346ce970527f 305 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 101 296 1.1E-25 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SMA_RS05330 768912c0967961c7e058346ce970527f 305 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 20 299 5.5E-90 T 25-04-2016 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 SMA_RS05330 768912c0967961c7e058346ce970527f 305 PANTHER PTHR30425:SF6 1 305 5.5E-160 T 25-04-2016 SMA_RS05330 768912c0967961c7e058346ce970527f 305 SUPERFAMILY SSF161098 24 295 5.36E-39 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SMA_RS06050 215a0df1cbb973710685cd7a601963ed 148 TIGRFAM TIGR03367 queuosine_QueD: queuosine biosynthesis protein QueD 25 114 2.0E-30 T 25-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein SMA_RS06050 215a0df1cbb973710685cd7a601963ed 148 PANTHER PTHR12589:SF5 14 148 5.7E-45 T 25-04-2016 SMA_RS06050 215a0df1cbb973710685cd7a601963ed 148 SUPERFAMILY SSF55620 21 143 5.34E-40 T 25-04-2016 SMA_RS06050 215a0df1cbb973710685cd7a601963ed 148 PANTHER PTHR12589 14 148 5.7E-45 T 25-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein SMA_RS06050 215a0df1cbb973710685cd7a601963ed 148 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 25 143 2.5E-36 T 25-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein SMA_RS06050 215a0df1cbb973710685cd7a601963ed 148 Gene3D G3DSA:3.30.479.10 21 144 7.3E-42 T 25-04-2016 SMA_RS06050 215a0df1cbb973710685cd7a601963ed 148 PIRSF PIRSF006113 20 143 1.2E-27 T 25-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein SMA_RS09995 4e948091d7b8546dbe80f6f3a049669b 414 PANTHER PTHR37814 1 372 9.6E-70 T 25-04-2016 SMA_RS09995 4e948091d7b8546dbe80f6f3a049669b 414 PANTHER PTHR37814:SF1 1 372 9.6E-70 T 25-04-2016 SMA_RS07255 29954baedafe79eb0b6860b045fc3968 115 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 4 113 1.0E-49 T 25-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS07255 29954baedafe79eb0b6860b045fc3968 115 Pfam PF01245 Ribosomal protein L19 4 112 3.1E-51 T 25-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS07255 29954baedafe79eb0b6860b045fc3968 115 SUPERFAMILY SSF50104 1 114 1.4E-46 T 25-04-2016 IPR008991 Translation protein SH3-like domain SMA_RS07255 29954baedafe79eb0b6860b045fc3968 115 PIRSF PIRSF002191 1 115 1.7E-50 T 25-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS07255 29954baedafe79eb0b6860b045fc3968 115 PRINTS PR00061 Ribosomal protein L19 signature 88 113 2.2E-42 T 25-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS07255 29954baedafe79eb0b6860b045fc3968 115 PRINTS PR00061 Ribosomal protein L19 signature 34 63 2.2E-42 T 25-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS07255 29954baedafe79eb0b6860b045fc3968 115 PRINTS PR00061 Ribosomal protein L19 signature 4 33 2.2E-42 T 25-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS07255 29954baedafe79eb0b6860b045fc3968 115 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 2 114 31.66 T 25-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS07255 29954baedafe79eb0b6860b045fc3968 115 PANTHER PTHR15680 1 115 2.8E-52 T 25-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS07255 29954baedafe79eb0b6860b045fc3968 115 ProSitePatterns PS01015 Ribosomal protein L19 signature. 86 101 - T 25-04-2016 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS07925 a34ee1fa2ab9bb1001ae412c28b5d180 147 Pfam PF04266 ASCH domain 24 144 8.4E-30 T 25-04-2016 IPR007374 ASCH domain SMA_RS07925 a34ee1fa2ab9bb1001ae412c28b5d180 147 PANTHER PTHR39203 1 147 8.8E-48 T 25-04-2016 SMA_RS07925 a34ee1fa2ab9bb1001ae412c28b5d180 147 PIRSF PIRSF021320 1 147 6.4E-63 T 25-04-2016 IPR009326 Protein of unknown function DUF984 SMA_RS07925 a34ee1fa2ab9bb1001ae412c28b5d180 147 SUPERFAMILY SSF88697 2 145 1.49E-57 T 25-04-2016 IPR015947 PUA-like domain SMA_RS07925 a34ee1fa2ab9bb1001ae412c28b5d180 147 SMART SM01022 24 144 1.7E-45 T 25-04-2016 IPR007374 ASCH domain SMA_RS07925 a34ee1fa2ab9bb1001ae412c28b5d180 147 Gene3D G3DSA:3.10.400.10 1 145 7.1E-65 T 25-04-2016 SMA_RS10390 85384f52efd1639d9ceb1b67c13b833b 265 Pfam PF02361 Cobalt transport protein 13 236 9.0E-51 T 25-04-2016 IPR003339 ABC/ECF transporter, transmembrane component SMA_RS10390 85384f52efd1639d9ceb1b67c13b833b 265 Hamap MF_01461 Energy-coupling factor transporter transmembrane protein EcfT [ecfT]. 1 264 37.343 T 25-04-2016 IPR024919 ECF transporter transmembrane protein EcfT GO:0005215|GO:0006810|GO:0016021 SMA_RS10390 85384f52efd1639d9ceb1b67c13b833b 265 PANTHER PTHR33514 1 265 4.5E-131 T 25-04-2016 SMA_RS10390 85384f52efd1639d9ceb1b67c13b833b 265 PANTHER PTHR33514:SF2 1 265 4.5E-131 T 25-04-2016 SMA_RS08780 e492d302599caeaf7678a251f6806d3d 631 Gene3D G3DSA:2.70.70.10 482 630 8.5E-61 T 25-04-2016 SMA_RS08780 e492d302599caeaf7678a251f6806d3d 631 Pfam PF02378 Phosphotransferase system, EIIC 109 399 6.0E-33 T 25-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 SMA_RS08780 e492d302599caeaf7678a251f6806d3d 631 TIGRFAM TIGR01996 PTS-II-BC-sucr: PTS system, sucrose-specific IIBC component 3 455 1.4E-175 T 25-04-2016 IPR010973 Phosphotransferase system, sucrose-specific IIBC component GO:0008982|GO:0009401|GO:0016021 SMA_RS08780 e492d302599caeaf7678a251f6806d3d 631 SUPERFAMILY SSF55604 6 79 2.62E-20 T 25-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 SMA_RS08780 e492d302599caeaf7678a251f6806d3d 631 PANTHER PTHR30175 1 581 1.8E-258 T 25-04-2016 SMA_RS08780 e492d302599caeaf7678a251f6806d3d 631 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 548 560 - T 25-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SMA_RS08780 e492d302599caeaf7678a251f6806d3d 631 PANTHER PTHR30175:SF7 1 581 1.8E-258 T 25-04-2016 SMA_RS08780 e492d302599caeaf7678a251f6806d3d 631 SUPERFAMILY SSF51261 481 628 2.49E-53 T 25-04-2016 IPR011055 Duplicated hybrid motif SMA_RS08780 e492d302599caeaf7678a251f6806d3d 631 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 19 36 - T 25-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 SMA_RS08780 e492d302599caeaf7678a251f6806d3d 631 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 485 609 9.4E-50 T 25-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SMA_RS08780 e492d302599caeaf7678a251f6806d3d 631 Gene3D G3DSA:3.30.1360.60 2 80 3.2E-26 T 25-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 SMA_RS08780 e492d302599caeaf7678a251f6806d3d 631 Pfam PF00367 phosphotransferase system, EIIB 8 41 2.4E-14 T 25-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 SMA_RS08780 e492d302599caeaf7678a251f6806d3d 631 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 486 606 8.0E-46 T 25-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SMA_RS05110 19bc880e9c24a04c0d6fc87002510e1e 183 PANTHER PTHR23416 1 183 3.1E-89 T 25-04-2016 SMA_RS05110 19bc880e9c24a04c0d6fc87002510e1e 183 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 128 163 1.4E-10 T 25-04-2016 IPR001451 Hexapeptide repeat SMA_RS05110 19bc880e9c24a04c0d6fc87002510e1e 183 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 93 105 0.075 T 25-04-2016 IPR001451 Hexapeptide repeat SMA_RS05110 19bc880e9c24a04c0d6fc87002510e1e 183 SUPERFAMILY SSF51161 3 182 2.5E-46 T 25-04-2016 IPR011004 Trimeric LpxA-like SMA_RS05110 19bc880e9c24a04c0d6fc87002510e1e 183 Gene3D G3DSA:2.160.10.10 2 182 4.2E-57 T 25-04-2016 SMA_RS05110 19bc880e9c24a04c0d6fc87002510e1e 183 PANTHER PTHR23416:SF58 1 183 3.1E-89 T 25-04-2016 SMA_RS05110 19bc880e9c24a04c0d6fc87002510e1e 183 Pfam PF12464 Maltose acetyltransferase 7 56 9.0E-18 T 25-04-2016 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 SMA_RS05110 19bc880e9c24a04c0d6fc87002510e1e 183 SMART SM01266 5 57 9.9E-22 T 25-04-2016 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 SMA_RS08725 84788a103d3b662c9acbdcc8bf7adbe8 67 Gene3D G3DSA:1.10.260.40 1 66 1.2E-12 T 25-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SMA_RS08725 84788a103d3b662c9acbdcc8bf7adbe8 67 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 5 67 8.3E-21 T 25-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SMA_RS08725 84788a103d3b662c9acbdcc8bf7adbe8 67 PANTHER PTHR37301 1 67 2.3E-27 T 25-04-2016 SMA_RS08725 84788a103d3b662c9acbdcc8bf7adbe8 67 SUPERFAMILY SSF47413 1 65 8.59E-15 T 25-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SMA_RS05980 e6c355ba6e77afebc8516d57b8006e5a 257 PANTHER PTHR24220:SF434 8 250 1.1E-129 T 25-04-2016 SMA_RS05980 e6c355ba6e77afebc8516d57b8006e5a 257 Pfam PF00005 ABC transporter 23 168 2.5E-35 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMA_RS05980 e6c355ba6e77afebc8516d57b8006e5a 257 SMART SM00382 31 221 1.8E-13 T 25-04-2016 IPR003593 AAA+ ATPase domain SMA_RS05980 e6c355ba6e77afebc8516d57b8006e5a 257 PANTHER PTHR24220 8 250 1.1E-129 T 25-04-2016 SMA_RS05980 e6c355ba6e77afebc8516d57b8006e5a 257 Gene3D G3DSA:3.40.50.300 3 243 6.3E-79 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS05980 e6c355ba6e77afebc8516d57b8006e5a 257 SUPERFAMILY SSF52540 6 244 3.33E-75 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS05980 e6c355ba6e77afebc8516d57b8006e5a 257 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SMA_RS03475 03cf07c909d1f56f3b4f2d241af3b5ae 307 Gene3D G3DSA:3.40.50.2300 54 169 5.3E-26 T 25-04-2016 SMA_RS03475 03cf07c909d1f56f3b4f2d241af3b5ae 307 SUPERFAMILY SSF53822 58 297 2.01E-34 T 25-04-2016 IPR028082 Periplasmic binding protein-like I SMA_RS03475 03cf07c909d1f56f3b4f2d241af3b5ae 307 SUPERFAMILY SSF47413 1 60 8.84E-19 T 25-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SMA_RS03475 03cf07c909d1f56f3b4f2d241af3b5ae 307 PANTHER PTHR30146 1 296 4.3E-62 T 25-04-2016 SMA_RS03475 03cf07c909d1f56f3b4f2d241af3b5ae 307 Gene3D G3DSA:3.40.50.2300 170 294 2.5E-12 T 25-04-2016 SMA_RS03475 03cf07c909d1f56f3b4f2d241af3b5ae 307 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 3.6E-19 T 25-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SMA_RS03475 03cf07c909d1f56f3b4f2d241af3b5ae 307 Gene3D G3DSA:1.10.260.40 2 53 1.3E-24 T 25-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SMA_RS03475 03cf07c909d1f56f3b4f2d241af3b5ae 307 PANTHER PTHR30146:SF61 1 296 4.3E-62 T 25-04-2016 SMA_RS03475 03cf07c909d1f56f3b4f2d241af3b5ae 307 SMART SM00354 1 71 1.3E-26 T 25-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SMA_RS03475 03cf07c909d1f56f3b4f2d241af3b5ae 307 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 59 287 9.5E-23 T 25-04-2016 IPR001761 Periplasmic binding protein/LacI sugar binding domain SMA_RS10375 f5a3643ebb89bec81928f7570e34861b 211 Pfam PF13419 Haloacid dehalogenase-like hydrolase 4 178 3.1E-39 T 25-04-2016 IPR023214 HAD-like domain SMA_RS10375 f5a3643ebb89bec81928f7570e34861b 211 Gene3D G3DSA:3.40.50.1000 73 208 1.5E-38 T 25-04-2016 IPR023214 HAD-like domain SMA_RS10375 f5a3643ebb89bec81928f7570e34861b 211 PANTHER PTHR18901:SF23 1 211 3.5E-62 T 25-04-2016 SMA_RS10375 f5a3643ebb89bec81928f7570e34861b 211 Gene3D G3DSA:1.10.150.240 15 72 1.7E-22 T 25-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 SMA_RS10375 f5a3643ebb89bec81928f7570e34861b 211 SUPERFAMILY SSF56784 1 209 4.94E-47 T 25-04-2016 IPR023214 HAD-like domain SMA_RS10375 f5a3643ebb89bec81928f7570e34861b 211 PANTHER PTHR18901 1 211 3.5E-62 T 25-04-2016 SMA_RS06730 f5a18df387f8e691eb6081b44de2d496 74 SUPERFAMILY SSF47413 3 66 3.66E-14 T 25-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SMA_RS06730 f5a18df387f8e691eb6081b44de2d496 74 SMART SM00530 4 59 1.5E-8 T 25-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SMA_RS06730 f5a18df387f8e691eb6081b44de2d496 74 Pfam PF01381 Helix-turn-helix 5 59 7.5E-11 T 25-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SMA_RS06730 f5a18df387f8e691eb6081b44de2d496 74 Gene3D G3DSA:1.10.260.40 3 61 3.5E-16 T 25-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SMA_RS08135 0d3b1a241fb28b2a73d630561a6b4f1c 364 SUPERFAMILY SSF53383 14 363 1.13E-92 T 25-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SMA_RS08135 0d3b1a241fb28b2a73d630561a6b4f1c 364 Gene3D G3DSA:3.40.640.10 7 245 1.7E-83 T 25-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SMA_RS08135 0d3b1a241fb28b2a73d630561a6b4f1c 364 PANTHER PTHR11808 6 364 4.9E-161 T 25-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 SMA_RS08135 0d3b1a241fb28b2a73d630561a6b4f1c 364 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 9 363 3.8E-121 T 25-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 SMA_RS08135 0d3b1a241fb28b2a73d630561a6b4f1c 364 Gene3D G3DSA:3.90.1150.10 247 363 5.2E-33 T 25-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SMA_RS08135 0d3b1a241fb28b2a73d630561a6b4f1c 364 PIRSF PIRSF001434 1 364 9.3E-117 T 25-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 SMA_RS08135 0d3b1a241fb28b2a73d630561a6b4f1c 364 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 189 203 - T 25-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 SMA_RS08135 0d3b1a241fb28b2a73d630561a6b4f1c 364 PANTHER PTHR11808:SF15 6 364 4.9E-161 T 25-04-2016 SMA_RS07780 295c00745ff98fcef2baf10240642d42 155 Gene3D G3DSA:2.40.280.10 8 127 4.7E-52 T 25-04-2016 IPR023620 Small protein B SMA_RS07780 295c00745ff98fcef2baf10240642d42 155 TIGRFAM TIGR00086 smpB: SsrA-binding protein 9 150 3.7E-57 T 25-04-2016 IPR000037 SsrA-binding protein GO:0003723 SMA_RS07780 295c00745ff98fcef2baf10240642d42 155 Pfam PF01668 SmpB protein 8 72 1.8E-31 T 25-04-2016 IPR000037 SsrA-binding protein GO:0003723 SMA_RS07780 295c00745ff98fcef2baf10240642d42 155 PANTHER PTHR30308 1 155 1.8E-80 T 25-04-2016 SMA_RS07780 295c00745ff98fcef2baf10240642d42 155 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 9 132 3.0E-55 T 25-04-2016 IPR000037 SsrA-binding protein GO:0003723 SMA_RS07780 295c00745ff98fcef2baf10240642d42 155 Hamap MF_00023 SsrA-binding protein [smpB]. 1 155 72.254 T 25-04-2016 IPR000037 SsrA-binding protein GO:0003723 SMA_RS07780 295c00745ff98fcef2baf10240642d42 155 PANTHER PTHR30308:SF2 1 155 1.8E-80 T 25-04-2016 SMA_RS07780 295c00745ff98fcef2baf10240642d42 155 ProSitePatterns PS01317 SsrA-binding protein. 27 39 - T 25-04-2016 IPR020081 SsrA-binding protein, conserved site SMA_RS07780 295c00745ff98fcef2baf10240642d42 155 SUPERFAMILY SSF74982 4 132 4.97E-51 T 25-04-2016 IPR023620 Small protein B SMA_RS06430 7cfbd39ea160399e8993ff021d5f7e73 320 PANTHER PTHR22916 2 281 7.0E-49 T 25-04-2016 SMA_RS06430 7cfbd39ea160399e8993ff021d5f7e73 320 PANTHER PTHR22916:SF24 2 281 7.0E-49 T 25-04-2016 SMA_RS06430 7cfbd39ea160399e8993ff021d5f7e73 320 SUPERFAMILY SSF53448 1 206 1.78E-51 T 25-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SMA_RS06430 7cfbd39ea160399e8993ff021d5f7e73 320 Gene3D G3DSA:3.90.550.10 2 185 4.1E-51 T 25-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SMA_RS06430 7cfbd39ea160399e8993ff021d5f7e73 320 Pfam PF00535 Glycosyl transferase family 2 3 123 5.5E-32 T 25-04-2016 IPR001173 Glycosyltransferase 2-like SMA_RS01745 87068f4d821852fa58237489950948dd 119 SMART SM00418 33 112 2.3E-30 T 25-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SMA_RS01745 87068f4d821852fa58237489950948dd 119 Gene3D G3DSA:1.10.10.10 2 112 7.8E-31 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMA_RS01745 87068f4d821852fa58237489950948dd 119 Pfam PF01022 Bacterial regulatory protein, arsR family 40 87 1.7E-15 T 25-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SMA_RS01745 87068f4d821852fa58237489950948dd 119 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 55 66 7.8E-22 T 25-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SMA_RS01745 87068f4d821852fa58237489950948dd 119 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 68 83 7.8E-22 T 25-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SMA_RS01745 87068f4d821852fa58237489950948dd 119 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 83 98 7.8E-22 T 25-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SMA_RS01745 87068f4d821852fa58237489950948dd 119 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 35 50 7.8E-22 T 25-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SMA_RS01745 87068f4d821852fa58237489950948dd 119 PANTHER PTHR33154 31 109 3.2E-20 T 25-04-2016 SMA_RS01745 87068f4d821852fa58237489950948dd 119 ProSitePatterns PS00846 Bacterial regulatory proteins, arsR family signature. 57 75 - T 25-04-2016 IPR018334 ArsR-type transcription regulator, HTH motif GO:0003700|GO:0005622|GO:0006355 SMA_RS01745 87068f4d821852fa58237489950948dd 119 SUPERFAMILY SSF46785 23 109 1.19E-23 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMA_RS02350 a4ed1e889a570727b67451e8388c9025 324 SUPERFAMILY SSF81799 126 227 1.7E-35 T 25-04-2016 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SMA_RS02350 a4ed1e889a570727b67451e8388c9025 324 PANTHER PTHR11265:SF0 1 324 3.9E-149 T 25-04-2016 SMA_RS02350 a4ed1e889a570727b67451e8388c9025 324 SUPERFAMILY SSF53335 14 125 1.13E-44 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMA_RS02350 a4ed1e889a570727b67451e8388c9025 324 SUPERFAMILY SSF53335 227 322 1.13E-44 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMA_RS02350 a4ed1e889a570727b67451e8388c9025 324 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 15 322 37.694 T 25-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SMA_RS02350 a4ed1e889a570727b67451e8388c9025 324 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 11 321 3.8E-119 T 25-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SMA_RS02350 a4ed1e889a570727b67451e8388c9025 324 PANTHER PTHR11265 1 324 3.9E-149 T 25-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SMA_RS02350 a4ed1e889a570727b67451e8388c9025 324 PIRSF PIRSF004486 9 323 2.2E-107 T 25-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SMA_RS02350 a4ed1e889a570727b67451e8388c9025 324 Pfam PF01795 MraW methylase family 13 321 1.3E-132 T 25-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SMA_RS02350 a4ed1e889a570727b67451e8388c9025 324 Gene3D G3DSA:3.40.50.150 230 322 1.2E-49 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMA_RS02350 a4ed1e889a570727b67451e8388c9025 324 Gene3D G3DSA:3.40.50.150 15 122 1.2E-49 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMA_RS02350 a4ed1e889a570727b67451e8388c9025 324 Gene3D G3DSA:1.10.150.170 125 229 1.8E-39 T 25-04-2016 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SMA_RS05580 e7ae8a1b1922d3c687b0ea092e90aa2d 264 PANTHER PTHR30193 7 264 2.3E-100 T 25-04-2016 SMA_RS05580 e7ae8a1b1922d3c687b0ea092e90aa2d 264 PANTHER PTHR30193:SF10 7 264 2.3E-100 T 25-04-2016 SMA_RS05580 e7ae8a1b1922d3c687b0ea092e90aa2d 264 SUPERFAMILY SSF161098 4 259 7.48E-51 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SMA_RS05580 e7ae8a1b1922d3c687b0ea092e90aa2d 264 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 56 259 3.3E-10 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SMA_RS05580 e7ae8a1b1922d3c687b0ea092e90aa2d 264 Gene3D G3DSA:1.10.3720.10 7 260 1.1E-45 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SMA_RS02765 3354bda93f4fee39bd7f2d8540bee075 192 SUPERFAMILY SSF55729 14 186 6.42E-40 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMA_RS02765 3354bda93f4fee39bd7f2d8540bee075 192 PANTHER PTHR13256 16 190 7.9E-49 T 25-04-2016 SMA_RS02765 3354bda93f4fee39bd7f2d8540bee075 192 Pfam PF13302 Acetyltransferase (GNAT) domain 20 161 2.5E-29 T 25-04-2016 IPR000182 GNAT domain GO:0008080 SMA_RS02765 3354bda93f4fee39bd7f2d8540bee075 192 PANTHER PTHR13256:SF10 16 190 7.9E-49 T 25-04-2016 SMA_RS02765 3354bda93f4fee39bd7f2d8540bee075 192 Gene3D G3DSA:3.40.630.30 12 190 1.2E-47 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMA_RS03285 4d6fcaabea4d6613d6a0ca9889cd94fe 90 SUPERFAMILY SSF82771 10 81 6.8E-16 T 25-04-2016 IPR000305 GIY-YIG nuclease superfamily SMA_RS03285 4d6fcaabea4d6613d6a0ca9889cd94fe 90 PANTHER PTHR34477 4 90 9.5E-37 T 25-04-2016 SMA_RS03285 4d6fcaabea4d6613d6a0ca9889cd94fe 90 PANTHER PTHR34477:SF1 4 90 9.5E-37 T 25-04-2016 SMA_RS03285 4d6fcaabea4d6613d6a0ca9889cd94fe 90 Pfam PF01541 GIY-YIG catalytic domain 11 82 2.3E-18 T 25-04-2016 IPR000305 GIY-YIG nuclease superfamily SMA_RS02265 0f3a5beb326a0278b790160b71debc31 186 PANTHER PTHR30055 14 180 1.4E-13 T 25-04-2016 SMA_RS02265 0f3a5beb326a0278b790160b71debc31 186 Gene3D G3DSA:1.10.357.10 21 182 1.2E-16 T 25-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 SMA_RS02265 0f3a5beb326a0278b790160b71debc31 186 PANTHER PTHR30055:SF55 14 180 1.4E-13 T 25-04-2016 SMA_RS02265 0f3a5beb326a0278b790160b71debc31 186 Pfam PF00440 Bacterial regulatory proteins, tetR family 37 75 1.8E-8 T 25-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SMA_RS02265 0f3a5beb326a0278b790160b71debc31 186 SUPERFAMILY SSF46689 22 86 2.1E-11 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMA_RS05500 e9a101a2d11882f8fc3f298c377695b9 218 Gene3D G3DSA:3.40.50.1110 37 217 9.5E-42 T 25-04-2016 IPR013830 SGNH hydrolase-type esterase domain SMA_RS05500 e9a101a2d11882f8fc3f298c377695b9 218 SUPERFAMILY SSF52266 20 217 4.12E-42 T 25-04-2016 IPR013830 SGNH hydrolase-type esterase domain SMA_RS05500 e9a101a2d11882f8fc3f298c377695b9 218 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 47 207 8.5E-17 T 25-04-2016 IPR013830 SGNH hydrolase-type esterase domain SMA_RS05500 e9a101a2d11882f8fc3f298c377695b9 218 PANTHER PTHR30383 43 218 9.9E-17 T 25-04-2016 SMA_RS09195 00c60c48f5c937dc9ec5d664a2c60a84 137 Pfam PF00164 Ribosomal protein S12/S23 2 136 7.2E-39 T 25-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS09195 00c60c48f5c937dc9ec5d664a2c60a84 137 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 136 39.828 T 25-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 SMA_RS09195 00c60c48f5c937dc9ec5d664a2c60a84 137 ProSitePatterns PS00055 Ribosomal protein S12 signature. 56 63 - T 25-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS09195 00c60c48f5c937dc9ec5d664a2c60a84 137 PANTHER PTHR11652 1 129 1.2E-70 T 25-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS09195 00c60c48f5c937dc9ec5d664a2c60a84 137 PIRSF PIRSF002133 1 137 1.6E-47 T 25-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS09195 00c60c48f5c937dc9ec5d664a2c60a84 137 SUPERFAMILY SSF50249 2 136 1.63E-47 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMA_RS09195 00c60c48f5c937dc9ec5d664a2c60a84 137 Gene3D G3DSA:2.40.50.140 1 136 6.8E-62 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMA_RS09195 00c60c48f5c937dc9ec5d664a2c60a84 137 PRINTS PR01034 Ribosomal protein S12 signature 123 135 3.3E-57 T 25-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 SMA_RS09195 00c60c48f5c937dc9ec5d664a2c60a84 137 PRINTS PR01034 Ribosomal protein S12 signature 107 123 3.3E-57 T 25-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 SMA_RS09195 00c60c48f5c937dc9ec5d664a2c60a84 137 PRINTS PR01034 Ribosomal protein S12 signature 55 70 3.3E-57 T 25-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 SMA_RS09195 00c60c48f5c937dc9ec5d664a2c60a84 137 PRINTS PR01034 Ribosomal protein S12 signature 40 55 3.3E-57 T 25-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 SMA_RS09195 00c60c48f5c937dc9ec5d664a2c60a84 137 PRINTS PR01034 Ribosomal protein S12 signature 71 90 3.3E-57 T 25-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 SMA_RS09195 00c60c48f5c937dc9ec5d664a2c60a84 137 PRINTS PR01034 Ribosomal protein S12 signature 90 107 3.3E-57 T 25-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 SMA_RS09195 00c60c48f5c937dc9ec5d664a2c60a84 137 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 136 9.6E-67 T 25-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 SMA_RS01470 7d4ae0ccd55c86b7bba6ed4352cf31d3 73 SUPERFAMILY SSF56349 12 55 1.91E-10 T 25-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 SMA_RS01470 7d4ae0ccd55c86b7bba6ed4352cf31d3 73 Gene3D G3DSA:1.10.443.10 12 56 7.1E-11 T 25-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 SMA_RS01470 7d4ae0ccd55c86b7bba6ed4352cf31d3 73 Pfam PF00589 Phage integrase family 12 55 3.2E-7 T 25-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 SMA_RS05055 152840f978ad729d3e464a0ba168ec5a 226 SUPERFAMILY SSF47413 2 66 6.7E-16 T 25-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SMA_RS05055 152840f978ad729d3e464a0ba168ec5a 226 SMART SM00530 6 61 1.1E-15 T 25-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SMA_RS05055 152840f978ad729d3e464a0ba168ec5a 226 Pfam PF01381 Helix-turn-helix 7 61 5.9E-16 T 25-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SMA_RS05055 152840f978ad729d3e464a0ba168ec5a 226 Gene3D G3DSA:2.10.109.10 135 224 7.7E-17 T 25-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain SMA_RS05055 152840f978ad729d3e464a0ba168ec5a 226 Pfam PF00717 Peptidase S24-like 142 201 4.0E-12 T 25-04-2016 IPR019759 Peptidase S24/S26A/S26B SMA_RS05055 152840f978ad729d3e464a0ba168ec5a 226 SUPERFAMILY SSF51306 103 221 1.57E-24 T 25-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C SMA_RS05055 152840f978ad729d3e464a0ba168ec5a 226 PANTHER PTHR10245 4 69 3.0E-13 T 25-04-2016 SMA_RS05055 152840f978ad729d3e464a0ba168ec5a 226 Gene3D G3DSA:1.10.260.40 1 63 3.5E-21 T 25-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SMA_RS05180 a80ff98d4199ae21a63d1e19477a8514 228 PANTHER PTHR14359:SF22 1 96 1.5E-62 T 25-04-2016 SMA_RS05180 a80ff98d4199ae21a63d1e19477a8514 228 PANTHER PTHR14359:SF22 117 224 1.5E-62 T 25-04-2016 SMA_RS05180 a80ff98d4199ae21a63d1e19477a8514 228 PANTHER PTHR14359 1 96 1.5E-62 T 25-04-2016 SMA_RS05180 a80ff98d4199ae21a63d1e19477a8514 228 PANTHER PTHR14359 117 224 1.5E-62 T 25-04-2016 SMA_RS05180 a80ff98d4199ae21a63d1e19477a8514 228 TIGRFAM TIGR02114 coaB_strep: phosphopantothenate--cysteine ligase 1 227 3.1E-100 T 25-04-2016 IPR011848 Phosphopantothenate--cysteine ligase SMA_RS05180 a80ff98d4199ae21a63d1e19477a8514 228 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 2 98 4.9E-23 T 25-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 SMA_RS05180 a80ff98d4199ae21a63d1e19477a8514 228 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 111 192 9.0E-8 T 25-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 SMA_RS05180 a80ff98d4199ae21a63d1e19477a8514 228 Gene3D G3DSA:3.40.50.10300 1 226 1.2E-49 T 25-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 SMA_RS05180 a80ff98d4199ae21a63d1e19477a8514 228 SUPERFAMILY SSF102645 1 226 1.22E-47 T 25-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 SMA_RS03215 a18cbfacb9f2b8f35adde4a8cf4b78fe 104 SUPERFAMILY SSF46785 11 102 1.11E-23 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMA_RS03215 a18cbfacb9f2b8f35adde4a8cf4b78fe 104 PANTHER PTHR33154 8 103 1.8E-22 T 25-04-2016 SMA_RS03215 a18cbfacb9f2b8f35adde4a8cf4b78fe 104 PANTHER PTHR33154:SF9 8 103 1.8E-22 T 25-04-2016 SMA_RS03215 a18cbfacb9f2b8f35adde4a8cf4b78fe 104 Gene3D G3DSA:1.10.10.10 6 103 6.1E-30 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMA_RS03215 a18cbfacb9f2b8f35adde4a8cf4b78fe 104 SMART SM00418 21 99 2.2E-24 T 25-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SMA_RS03215 a18cbfacb9f2b8f35adde4a8cf4b78fe 104 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 55 70 1.1E-9 T 25-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SMA_RS03215 a18cbfacb9f2b8f35adde4a8cf4b78fe 104 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 23 38 1.1E-9 T 25-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SMA_RS03215 a18cbfacb9f2b8f35adde4a8cf4b78fe 104 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 70 85 1.1E-9 T 25-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SMA_RS03215 a18cbfacb9f2b8f35adde4a8cf4b78fe 104 Pfam PF01022 Bacterial regulatory protein, arsR family 29 73 8.7E-13 T 25-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SMA_RS08485 55019115e6a4bc86222b3bed4b576f63 183 PANTHER PTHR34478:SF2 1 182 2.8E-84 T 25-04-2016 SMA_RS08485 55019115e6a4bc86222b3bed4b576f63 183 Gene3D G3DSA:1.20.1440.20 11 181 2.3E-66 T 25-04-2016 IPR023353 LemA-like domain SMA_RS08485 55019115e6a4bc86222b3bed4b576f63 183 Pfam PF04011 LemA family 5 181 1.6E-70 T 25-04-2016 IPR007156 LemA SMA_RS08485 55019115e6a4bc86222b3bed4b576f63 183 PANTHER PTHR34478 1 182 2.8E-84 T 25-04-2016 SMA_RS08485 55019115e6a4bc86222b3bed4b576f63 183 SUPERFAMILY SSF140478 23 170 1.1E-54 T 25-04-2016 IPR023353 LemA-like domain SMA_RS02015 cf34f9bc73da751073b499d8a454e925 453 Pfam PF00696 Amino acid kinase family 2 276 1.9E-45 T 25-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SMA_RS02015 cf34f9bc73da751073b499d8a454e925 453 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 3 448 1.7E-85 T 25-04-2016 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 SMA_RS02015 cf34f9bc73da751073b499d8a454e925 453 SUPERFAMILY SSF55021 372 450 7.02E-22 T 25-04-2016 SMA_RS02015 cf34f9bc73da751073b499d8a454e925 453 PIRSF PIRSF000726 1 453 5.0E-83 T 25-04-2016 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 SMA_RS02015 cf34f9bc73da751073b499d8a454e925 453 ProSitePatterns PS00324 Aspartokinase signature. 3 11 - T 25-04-2016 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 SMA_RS02015 cf34f9bc73da751073b499d8a454e925 453 PANTHER PTHR21499:SF3 3 452 8.5E-136 T 25-04-2016 SMA_RS02015 cf34f9bc73da751073b499d8a454e925 453 Gene3D G3DSA:3.40.1160.10 1 54 2.3E-50 T 25-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SMA_RS02015 cf34f9bc73da751073b499d8a454e925 453 Gene3D G3DSA:3.40.1160.10 105 289 2.3E-50 T 25-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SMA_RS02015 cf34f9bc73da751073b499d8a454e925 453 PANTHER PTHR21499 3 452 8.5E-136 T 25-04-2016 SMA_RS02015 cf34f9bc73da751073b499d8a454e925 453 SUPERFAMILY SSF55021 298 359 2.67E-10 T 25-04-2016 SMA_RS02015 cf34f9bc73da751073b499d8a454e925 453 Pfam PF13840 ACT domain 380 445 1.6E-9 T 25-04-2016 IPR027795 GATS-like ACT domain SMA_RS02015 cf34f9bc73da751073b499d8a454e925 453 SUPERFAMILY SSF53633 1 288 2.34E-69 T 25-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SMA_RS07860 955a178ee7e0fcb0df9584590171e8b7 185 Hamap MF_00040 Ribosome-recycling factor [frr]. 3 185 26.968 T 25-04-2016 IPR002661 Ribosome recycling factor GO:0006412 SMA_RS07860 955a178ee7e0fcb0df9584590171e8b7 185 Gene3D G3DSA:1.10.132.20 66 185 1.7E-43 T 25-04-2016 IPR023584 Ribosome recycling factor domain SMA_RS07860 955a178ee7e0fcb0df9584590171e8b7 185 TIGRFAM TIGR00496 frr: ribosome recycling factor 10 185 2.9E-71 T 25-04-2016 IPR002661 Ribosome recycling factor GO:0006412 SMA_RS07860 955a178ee7e0fcb0df9584590171e8b7 185 Pfam PF01765 Ribosome recycling factor 21 183 1.1E-63 T 25-04-2016 IPR023584 Ribosome recycling factor domain SMA_RS07860 955a178ee7e0fcb0df9584590171e8b7 185 SUPERFAMILY SSF55194 3 184 2.62E-69 T 25-04-2016 IPR023584 Ribosome recycling factor domain SMA_RS07860 955a178ee7e0fcb0df9584590171e8b7 185 PANTHER PTHR20982 1 185 2.3E-82 T 25-04-2016 IPR002661 Ribosome recycling factor GO:0006412 SMA_RS10310 a72dc546fd14e0533e74403c4c4d689e 117 PANTHER PTHR38446:SF1 2 117 1.5E-31 T 25-04-2016 SMA_RS10310 a72dc546fd14e0533e74403c4c4d689e 117 PANTHER PTHR38446 2 117 1.5E-31 T 25-04-2016 SMA_RS10310 a72dc546fd14e0533e74403c4c4d689e 117 Pfam PF06993 Protein of unknown function (DUF1304) 10 115 8.1E-34 T 25-04-2016 IPR009732 Protein of unknown function DUF1304 SMA_RS05925 f8763e61d783833edf51ea0001c4b248 103 Pfam PF01555 DNA methylase 3 60 4.3E-8 T 25-04-2016 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 SMA_RS05925 f8763e61d783833edf51ea0001c4b248 103 Gene3D G3DSA:3.40.50.150 3 63 7.3E-12 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMA_RS05925 f8763e61d783833edf51ea0001c4b248 103 SUPERFAMILY SSF53335 4 66 1.29E-8 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMA_RS09210 da4fb2774cbcc3586fe411c0d33af895 424 SUPERFAMILY SSF47162 23 152 6.54E-7 T 25-04-2016 SMA_RS09210 da4fb2774cbcc3586fe411c0d33af895 424 Pfam PF02646 RmuC family 117 407 3.7E-74 T 25-04-2016 IPR003798 DNA recombination RmuC SMA_RS09210 da4fb2774cbcc3586fe411c0d33af895 424 PANTHER PTHR30563 11 423 3.6E-96 T 25-04-2016 SMA_RS09210 da4fb2774cbcc3586fe411c0d33af895 424 Gene3D G3DSA:1.20.120.20 24 152 1.4E-6 T 25-04-2016 SMA_RS03635 f0ce304649f0757d435207052b620ead 345 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 3 345 46.203 T 25-04-2016 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396|UniPathway: UPA00048 SMA_RS03635 f0ce304649f0757d435207052b620ead 345 PANTHER PTHR11835 2 345 1.4E-191 T 25-04-2016 IPR001804 Isocitrate and isopropylmalate dehydrogenases family GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 SMA_RS03635 f0ce304649f0757d435207052b620ead 345 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 4 343 6.3E-142 T 25-04-2016 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396|UniPathway: UPA00048 SMA_RS03635 f0ce304649f0757d435207052b620ead 345 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 4 341 6.7E-130 T 25-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 SMA_RS03635 f0ce304649f0757d435207052b620ead 345 Gene3D G3DSA:3.40.718.10 1 345 4.3E-129 T 25-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 SMA_RS03635 f0ce304649f0757d435207052b620ead 345 SUPERFAMILY SSF53659 1 345 6.66E-119 T 25-04-2016 SMA_RS03635 f0ce304649f0757d435207052b620ead 345 PANTHER PTHR11835:SF35 2 345 1.4E-191 T 25-04-2016 SMA_RS03635 f0ce304649f0757d435207052b620ead 345 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 236 255 - T 25-04-2016 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 SMA_RS03635 f0ce304649f0757d435207052b620ead 345 SMART SM01329 4 341 1.7E-188 T 25-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 SMA_RS09365 b16b29afefaf095d48570dfa19a4dbcc 598 Gene3D G3DSA:2.70.150.10 62 211 4.0E-27 T 25-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 SMA_RS09365 b16b29afefaf095d48570dfa19a4dbcc 598 Gene3D G3DSA:3.40.1110.10 317 422 2.8E-13 T 25-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 SMA_RS09365 b16b29afefaf095d48570dfa19a4dbcc 598 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 491 510 3.4E-24 T 25-04-2016 SMA_RS09365 b16b29afefaf095d48570dfa19a4dbcc 598 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 438 448 3.4E-24 T 25-04-2016 SMA_RS09365 b16b29afefaf095d48570dfa19a4dbcc 598 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 302 316 3.4E-24 T 25-04-2016 SMA_RS09365 b16b29afefaf095d48570dfa19a4dbcc 598 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 415 426 3.4E-24 T 25-04-2016 SMA_RS09365 b16b29afefaf095d48570dfa19a4dbcc 598 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 515 527 3.4E-24 T 25-04-2016 SMA_RS09365 b16b29afefaf095d48570dfa19a4dbcc 598 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 160 174 3.4E-24 T 25-04-2016 SMA_RS09365 b16b29afefaf095d48570dfa19a4dbcc 598 SUPERFAMILY SSF81665 211 296 1.44E-8 T 25-04-2016 SMA_RS09365 b16b29afefaf095d48570dfa19a4dbcc 598 SUPERFAMILY SSF81665 66 111 1.44E-8 T 25-04-2016 SMA_RS09365 b16b29afefaf095d48570dfa19a4dbcc 598 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 60 593 1.2E-169 T 25-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 SMA_RS09365 b16b29afefaf095d48570dfa19a4dbcc 598 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 82 575 6.0E-77 T 25-04-2016 IPR001757 P-type ATPase GO:0016021 SMA_RS09365 b16b29afefaf095d48570dfa19a4dbcc 598 SUPERFAMILY SSF56784 301 591 9.07E-49 T 25-04-2016 IPR023214 HAD-like domain SMA_RS09365 b16b29afefaf095d48570dfa19a4dbcc 598 Pfam PF00122 E1-E2 ATPase 82 293 1.8E-57 T 25-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 SMA_RS09365 b16b29afefaf095d48570dfa19a4dbcc 598 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 491 507 1.3E-7 T 25-04-2016 IPR001757 P-type ATPase GO:0016021 SMA_RS09365 b16b29afefaf095d48570dfa19a4dbcc 598 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 346 364 1.3E-7 T 25-04-2016 IPR001757 P-type ATPase GO:0016021 SMA_RS09365 b16b29afefaf095d48570dfa19a4dbcc 598 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 523 548 1.3E-7 T 25-04-2016 IPR001757 P-type ATPase GO:0016021 SMA_RS09365 b16b29afefaf095d48570dfa19a4dbcc 598 PANTHER PTHR24093:SF317 31 587 1.6E-132 T 25-04-2016 SMA_RS09365 b16b29afefaf095d48570dfa19a4dbcc 598 PANTHER PTHR24093 31 587 1.6E-132 T 25-04-2016 SMA_RS09365 b16b29afefaf095d48570dfa19a4dbcc 598 Gene3D G3DSA:3.40.50.1000 423 538 8.1E-42 T 25-04-2016 IPR023214 HAD-like domain SMA_RS09365 b16b29afefaf095d48570dfa19a4dbcc 598 Gene3D G3DSA:3.40.50.1000 286 316 8.1E-42 T 25-04-2016 IPR023214 HAD-like domain SMA_RS09365 b16b29afefaf095d48570dfa19a4dbcc 598 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 304 310 - T 25-04-2016 IPR018303 P-type ATPase, phosphorylation site SMA_RS09365 b16b29afefaf095d48570dfa19a4dbcc 598 SUPERFAMILY SSF81653 113 210 3.4E-23 T 25-04-2016 SMA_RS09365 b16b29afefaf095d48570dfa19a4dbcc 598 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 60 595 1.5E-155 T 25-04-2016 SMA_RS09365 b16b29afefaf095d48570dfa19a4dbcc 598 Pfam PF00702 haloacid dehalogenase-like hydrolase 299 505 4.5E-36 T 25-04-2016 SMA_RS06005 72dfc787b2174f766793762199037bc7 590 Pfam PF00664 ABC transporter transmembrane region 25 306 2.3E-49 T 25-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SMA_RS06005 72dfc787b2174f766793762199037bc7 590 PANTHER PTHR24221:SF271 12 590 2.3E-270 T 25-04-2016 SMA_RS06005 72dfc787b2174f766793762199037bc7 590 Gene3D G3DSA:3.40.50.300 352 579 2.1E-71 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS06005 72dfc787b2174f766793762199037bc7 590 SMART SM00382 377 562 5.2E-16 T 25-04-2016 IPR003593 AAA+ ATPase domain SMA_RS06005 72dfc787b2174f766793762199037bc7 590 Pfam PF00005 ABC transporter 370 516 8.0E-29 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMA_RS06005 72dfc787b2174f766793762199037bc7 590 SUPERFAMILY SSF52540 343 587 4.11E-87 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS06005 72dfc787b2174f766793762199037bc7 590 SUPERFAMILY SSF90123 12 336 4.71E-74 T 25-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SMA_RS06005 72dfc787b2174f766793762199037bc7 590 PANTHER PTHR24221 12 590 2.3E-270 T 25-04-2016 SMA_RS06005 72dfc787b2174f766793762199037bc7 590 Gene3D G3DSA:1.20.1560.10 12 336 1.1E-72 T 25-04-2016 SMA_RS09200 c5c438ff4f7e8e351f34bd850ec7891d 270 Gene3D G3DSA:3.40.50.2020 83 264 3.2E-55 T 25-04-2016 IPR029057 Phosphoribosyltransferase-like SMA_RS09200 c5c438ff4f7e8e351f34bd850ec7891d 270 Pfam PF00156 Phosphoribosyl transferase domain 107 264 7.2E-27 T 25-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 SMA_RS09200 c5c438ff4f7e8e351f34bd850ec7891d 270 ProDom PD029816 REPRESSOR OPERON PUR TRANSCRIPTION PURINE TRANSCRIPTIONAL PURR REGULATION DNA-BINDING GLYCOSYLTRANSFERASE 10 73 2.0E-27 T 25-04-2016 IPR015265 Bacterial purine repressor, N-terminal GO:0003677|GO:0006355 SMA_RS09200 c5c438ff4f7e8e351f34bd850ec7891d 270 Pfam PF09182 Bacterial purine repressor, N-terminal 4 73 2.5E-30 T 25-04-2016 IPR015265 Bacterial purine repressor, N-terminal GO:0003677|GO:0006355 SMA_RS09200 c5c438ff4f7e8e351f34bd850ec7891d 270 TIGRFAM TIGR01743 purR_Bsub: pur operon repressor PurR 3 269 1.7E-122 T 25-04-2016 IPR010078 Pur operon repressor GO:0003677|GO:0045892|GO:0045982 SMA_RS09200 c5c438ff4f7e8e351f34bd850ec7891d 270 Gene3D G3DSA:1.10.10.10 1 73 2.2E-37 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMA_RS09200 c5c438ff4f7e8e351f34bd850ec7891d 270 PANTHER PTHR11776:SF9 48 263 5.5E-110 T 25-04-2016 SMA_RS09200 c5c438ff4f7e8e351f34bd850ec7891d 270 SUPERFAMILY SSF53271 85 236 7.8E-36 T 25-04-2016 IPR029057 Phosphoribosyltransferase-like SMA_RS09200 c5c438ff4f7e8e351f34bd850ec7891d 270 PANTHER PTHR11776 48 263 5.5E-110 T 25-04-2016 SMA_RS09200 c5c438ff4f7e8e351f34bd850ec7891d 270 SUPERFAMILY SSF46785 2 73 4.08E-25 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMA_RS03640 ee750b0aa57a1943a2d5d9a5f2dcb87e 92 Pfam PF06961 Protein of unknown function (DUF1294) 15 69 1.9E-23 T 25-04-2016 IPR010718 Protein of unknown function DUF1294 SMA_RS03640 ee750b0aa57a1943a2d5d9a5f2dcb87e 92 PANTHER PTHR12962 1 92 4.7E-19 T 25-04-2016 SMA_RS03640 ee750b0aa57a1943a2d5d9a5f2dcb87e 92 PANTHER PTHR12962:SF1 1 92 4.7E-19 T 25-04-2016 SMA_RS03640 ee750b0aa57a1943a2d5d9a5f2dcb87e 92 PIRSF PIRSF002599 3 90 2.1E-12 T 25-04-2016 IPR012156 Cold shock, CspA GO:0003676 SMA_RS04010 86d3a802a30e67b6df3fc2fde9ea7d56 240 PANTHER PTHR24220:SF327 3 240 1.6E-117 T 25-04-2016 SMA_RS04010 86d3a802a30e67b6df3fc2fde9ea7d56 240 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SMA_RS04010 86d3a802a30e67b6df3fc2fde9ea7d56 240 SUPERFAMILY SSF52540 1 233 2.15E-73 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS04010 86d3a802a30e67b6df3fc2fde9ea7d56 240 PANTHER PTHR24220 3 240 1.6E-117 T 25-04-2016 SMA_RS04010 86d3a802a30e67b6df3fc2fde9ea7d56 240 PIRSF PIRSF039085 1 240 3.0E-98 T 25-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 SMA_RS04010 86d3a802a30e67b6df3fc2fde9ea7d56 240 SMART SM00382 26 213 6.4E-18 T 25-04-2016 IPR003593 AAA+ ATPase domain SMA_RS04010 86d3a802a30e67b6df3fc2fde9ea7d56 240 Gene3D G3DSA:3.40.50.300 1 236 1.2E-79 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS04010 86d3a802a30e67b6df3fc2fde9ea7d56 240 Pfam PF00005 ABC transporter 17 165 1.6E-35 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMA_RS06240 06ba67f494ef19e0c5cf41a4b8f46c98 157 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 51 59 1.9E-16 T 25-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 SMA_RS06240 06ba67f494ef19e0c5cf41a4b8f46c98 157 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 129 145 1.9E-16 T 25-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 SMA_RS06240 06ba67f494ef19e0c5cf41a4b8f46c98 157 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 95 110 1.9E-16 T 25-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 SMA_RS06240 06ba67f494ef19e0c5cf41a4b8f46c98 157 PANTHER PTHR33695:SF1 1 153 6.6E-46 T 25-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 SMA_RS06240 06ba67f494ef19e0c5cf41a4b8f46c98 157 ProSitePatterns PS00855 Signal peptidases II signature. 98 110 - T 25-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 SMA_RS06240 06ba67f494ef19e0c5cf41a4b8f46c98 157 PANTHER PTHR33695 1 153 6.6E-46 T 25-04-2016 SMA_RS06240 06ba67f494ef19e0c5cf41a4b8f46c98 157 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 4 154 15.908 T 25-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 SMA_RS06240 06ba67f494ef19e0c5cf41a4b8f46c98 157 TIGRFAM TIGR00077 lspA: signal peptidase II 7 151 3.2E-34 T 25-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 SMA_RS06240 06ba67f494ef19e0c5cf41a4b8f46c98 157 Pfam PF01252 Signal peptidase (SPase) II 13 147 7.0E-34 T 25-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 SMA_RS09870 cd6e1d6a9bc968e117937429ecf40583 148 PANTHER PTHR11241 19 148 7.6E-25 T 25-04-2016 SMA_RS09870 cd6e1d6a9bc968e117937429ecf40583 148 SUPERFAMILY SSF51283 11 148 1.57E-34 T 25-04-2016 IPR029054 dUTPase-like SMA_RS09870 cd6e1d6a9bc968e117937429ecf40583 148 Gene3D G3DSA:2.70.40.10 10 148 2.1E-39 T 25-04-2016 IPR029054 dUTPase-like SMA_RS09870 cd6e1d6a9bc968e117937429ecf40583 148 Pfam PF00692 dUTPase 19 130 6.5E-16 T 25-04-2016 IPR008180 Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase GO:0016787|GO:0046080 SMA_RS03390 b63fb5030c8b6fb32a6e93e08bf1cd79 260 Gene3D G3DSA:3.60.110.10 1 260 4.8E-79 T 25-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 SMA_RS03390 b63fb5030c8b6fb32a6e93e08bf1cd79 260 PANTHER PTHR23088 1 259 8.8E-84 T 25-04-2016 SMA_RS03390 b63fb5030c8b6fb32a6e93e08bf1cd79 260 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 140 160 - T 25-04-2016 IPR001110 Uncharacterised protein family UPF0012, conserved site SMA_RS03390 b63fb5030c8b6fb32a6e93e08bf1cd79 260 Pfam PF00795 Carbon-nitrogen hydrolase 2 245 3.7E-50 T 25-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 SMA_RS03390 b63fb5030c8b6fb32a6e93e08bf1cd79 260 SUPERFAMILY SSF56317 1 259 2.09E-73 T 25-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 SMA_RS05060 001ddf14e3b1405592f252d0664426fc 315 SMART SM00387 209 315 9.5E-17 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMA_RS05060 001ddf14e3b1405592f252d0664426fc 315 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 210 310 7.6E-16 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMA_RS05060 001ddf14e3b1405592f252d0664426fc 315 SUPERFAMILY SSF55874 156 310 2.75E-25 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMA_RS05060 001ddf14e3b1405592f252d0664426fc 315 PANTHER PTHR24423 1 89 8.0E-45 T 25-04-2016 SMA_RS05060 001ddf14e3b1405592f252d0664426fc 315 PANTHER PTHR24423 105 310 8.0E-45 T 25-04-2016 SMA_RS05060 001ddf14e3b1405592f252d0664426fc 315 Gene3D G3DSA:3.30.565.10 142 311 1.4E-23 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMA_RS05060 001ddf14e3b1405592f252d0664426fc 315 PANTHER PTHR24423:SF557 1 89 8.0E-45 T 25-04-2016 SMA_RS05060 001ddf14e3b1405592f252d0664426fc 315 PANTHER PTHR24423:SF557 105 310 8.0E-45 T 25-04-2016 SMA_RS00200 1c9a1a5e24fb4d2d9a30cb2c5a5603d5 254 PANTHER PTHR34138 1 252 1.3E-40 T 25-04-2016 SMA_RS00200 1c9a1a5e24fb4d2d9a30cb2c5a5603d5 254 Pfam PF04085 rod shape-determining protein MreC 102 252 2.3E-34 T 25-04-2016 IPR007221 Rod shape-determining protein MreC GO:0008360 SMA_RS00200 1c9a1a5e24fb4d2d9a30cb2c5a5603d5 254 PANTHER PTHR34138:SF1 1 252 1.3E-40 T 25-04-2016 SMA_RS00200 1c9a1a5e24fb4d2d9a30cb2c5a5603d5 254 PIRSF PIRSF038471 3 254 2.2E-48 T 25-04-2016 IPR007221 Rod shape-determining protein MreC GO:0008360 SMA_RS00200 1c9a1a5e24fb4d2d9a30cb2c5a5603d5 254 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 30 252 1.9E-42 T 25-04-2016 IPR007221 Rod shape-determining protein MreC GO:0008360 SMA_RS03690 c6932b69db851c2308a7500b5755706e 184 PANTHER PTHR13256 1 181 2.7E-80 T 25-04-2016 SMA_RS03690 c6932b69db851c2308a7500b5755706e 184 SUPERFAMILY SSF55729 12 174 1.15E-37 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMA_RS03690 c6932b69db851c2308a7500b5755706e 184 Pfam PF13302 Acetyltransferase (GNAT) domain 17 153 1.1E-27 T 25-04-2016 IPR000182 GNAT domain GO:0008080 SMA_RS03690 c6932b69db851c2308a7500b5755706e 184 PANTHER PTHR13256:SF31 1 181 2.7E-80 T 25-04-2016 SMA_RS03690 c6932b69db851c2308a7500b5755706e 184 Gene3D G3DSA:3.40.630.30 12 180 6.7E-41 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMA_RS05030 ecb9090ac2cb2cb039e8c737a8e3ef3f 110 Pfam PF04297 Putative helix-turn-helix protein, YlxM / p13 like 3 100 4.1E-42 T 25-04-2016 IPR007394 Putative helix-turn-helix protein, YlxM/p13-like SMA_RS05030 ecb9090ac2cb2cb039e8c737a8e3ef3f 110 Hamap MF_00245 UPF0122 protein . 3 103 20.848 T 25-04-2016 IPR007394 Putative helix-turn-helix protein, YlxM/p13-like SMA_RS05030 ecb9090ac2cb2cb039e8c737a8e3ef3f 110 PANTHER PTHR40083 2 110 6.4E-43 T 25-04-2016 SMA_RS05030 ecb9090ac2cb2cb039e8c737a8e3ef3f 110 SUPERFAMILY SSF88659 4 106 6.17E-33 T 25-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMA_RS05030 ecb9090ac2cb2cb039e8c737a8e3ef3f 110 Gene3D G3DSA:1.10.10.10 1 106 1.5E-41 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMA_RS02305 eb7cd662a2677b83bf7208065d22d7af 85 SUPERFAMILY SSF158221 2 41 5.36E-13 T 25-04-2016 SMA_RS02305 eb7cd662a2677b83bf7208065d22d7af 85 PANTHER PTHR37300 1 78 2.0E-35 T 25-04-2016 SMA_RS02305 eb7cd662a2677b83bf7208065d22d7af 85 Pfam PF05979 Bacterial protein of unknown function (DUF896) 4 67 1.1E-27 T 25-04-2016 IPR009242 Protein of unknown function DUF896 SMA_RS02305 eb7cd662a2677b83bf7208065d22d7af 85 Gene3D G3DSA:1.10.287.540 1 59 3.2E-25 T 25-04-2016 IPR023218 UPF0291 structural domain SMA_RS02305 eb7cd662a2677b83bf7208065d22d7af 85 Hamap MF_01103 UPF0291 protein . 1 59 15.035 T 25-04-2016 IPR009242 Protein of unknown function DUF896 SMA_RS02305 eb7cd662a2677b83bf7208065d22d7af 85 PANTHER PTHR37300:SF1 1 78 2.0E-35 T 25-04-2016 SMA_RS05875 4ab4af242f50343252bfb5ee4d34ab79 236 PANTHER PTHR32419:SF6 1 189 7.3E-56 T 25-04-2016 SMA_RS05875 4ab4af242f50343252bfb5ee4d34ab79 236 PANTHER PTHR32419 1 189 7.3E-56 T 25-04-2016 IPR016639 Glutathione S-transferase (GST) KEGG: 00480+2.5.1.18|KEGG: 00980+2.5.1.18|KEGG: 00982+2.5.1.18|MetaCyc: PWY-4061|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7533 SMA_RS05875 4ab4af242f50343252bfb5ee4d34ab79 236 Pfam PF13410 Glutathione S-transferase, C-terminal domain 100 169 4.4E-7 T 25-04-2016 SMA_RS05875 4ab4af242f50343252bfb5ee4d34ab79 236 Gene3D G3DSA:1.20.1050.10 62 180 2.2E-18 T 25-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like SMA_RS05875 4ab4af242f50343252bfb5ee4d34ab79 236 SUPERFAMILY SSF47616 60 182 8.77E-18 T 25-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like SMA_RS00660 f92455f96f83405f8c4b51018da7182c 272 SUPERFAMILY SSF81345 3 260 7.45E-36 T 25-04-2016 IPR029022 ABC transporter, BtuC-like SMA_RS00660 f92455f96f83405f8c4b51018da7182c 272 Gene3D G3DSA:1.10.3470.10 45 260 2.7E-5 T 25-04-2016 IPR029022 ABC transporter, BtuC-like SMA_RS00660 f92455f96f83405f8c4b51018da7182c 272 PANTHER PTHR30477 1 267 7.6E-81 T 25-04-2016 SMA_RS00660 f92455f96f83405f8c4b51018da7182c 272 PANTHER PTHR30477:SF0 1 267 7.6E-81 T 25-04-2016 SMA_RS00660 f92455f96f83405f8c4b51018da7182c 272 Pfam PF00950 ABC 3 transport family 7 263 7.9E-75 T 25-04-2016 IPR001626 ABC-3 GO:0005524|GO:0006810|GO:0016020|GO:0042626 SMA_RS09570 e35fc40376f69ebe318b0bac67fe2fed 413 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 55 261 5.0E-49 T 25-04-2016 IPR000477 Reverse transcriptase domain SMA_RS09570 e35fc40376f69ebe318b0bac67fe2fed 413 PANTHER PTHR19446 53 297 7.8E-81 T 25-04-2016 SMA_RS09570 e35fc40376f69ebe318b0bac67fe2fed 413 SUPERFAMILY SSF56672 5 348 4.94E-58 T 25-04-2016 SMA_RS09570 e35fc40376f69ebe318b0bac67fe2fed 413 Pfam PF08388 Group II intron, maturase-specific domain 278 349 1.4E-18 T 25-04-2016 IPR013597 Group II intron, maturase-specific SMA_RS09570 e35fc40376f69ebe318b0bac67fe2fed 413 TIGRFAM TIGR04416 group_II_RT_mat: group II intron reverse transcriptase/maturase 2 343 4.6E-127 T 25-04-2016 IPR030931 Group II intron reverse transcriptase/maturase SMA_RS09570 e35fc40376f69ebe318b0bac67fe2fed 413 PANTHER PTHR19446:SF107 53 297 7.8E-81 T 25-04-2016 SMA_RS01760 a9083f4f981e8108955f469d167eb7ed 67 PANTHER PTHR34977 1 67 4.8E-13 T 25-04-2016 SMA_RS01760 a9083f4f981e8108955f469d167eb7ed 67 Pfam PF05532 CsbD-like 3 52 1.8E-14 T 25-04-2016 IPR008462 CsbD-like SMA_RS01760 a9083f4f981e8108955f469d167eb7ed 67 SUPERFAMILY SSF69047 4 60 1.03E-10 T 25-04-2016 IPR008462 CsbD-like SMA_RS01760 a9083f4f981e8108955f469d167eb7ed 67 Gene3D G3DSA:1.10.1470.10 3 63 2.0E-18 T 25-04-2016 IPR008462 CsbD-like SMA_RS02970 ad7f7cb70d9b51671efad2347ce2da47 322 ProSitePatterns PS01125 ROK family signature. 139 166 - T 25-04-2016 IPR000600 ROK family SMA_RS02970 ad7f7cb70d9b51671efad2347ce2da47 322 Gene3D G3DSA:3.30.420.40 145 302 1.7E-58 T 25-04-2016 SMA_RS02970 ad7f7cb70d9b51671efad2347ce2da47 322 PANTHER PTHR18964 1 319 7.3E-100 T 25-04-2016 SMA_RS02970 ad7f7cb70d9b51671efad2347ce2da47 322 SUPERFAMILY SSF53067 4 320 1.89E-71 T 25-04-2016 SMA_RS02970 ad7f7cb70d9b51671efad2347ce2da47 322 PANTHER PTHR18964:SF123 1 319 7.3E-100 T 25-04-2016 SMA_RS02970 ad7f7cb70d9b51671efad2347ce2da47 322 Pfam PF00480 ROK family 6 319 6.6E-74 T 25-04-2016 IPR000600 ROK family SMA_RS02970 ad7f7cb70d9b51671efad2347ce2da47 322 Gene3D G3DSA:3.30.420.40 3 144 8.2E-43 T 25-04-2016 SMA_RS02970 ad7f7cb70d9b51671efad2347ce2da47 322 TIGRFAM TIGR00744 ROK_glcA_fam: ROK family protein (putative glucokinase) 6 318 2.4E-96 T 25-04-2016 IPR004654 Glucokinase ROK GO:0004340|GO:0005737|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 SMA_RS03815 67e27dcb2355b1b4a3000260c355e8a0 174 Gene3D G3DSA:3.40.630.30 4 161 3.7E-36 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMA_RS03815 67e27dcb2355b1b4a3000260c355e8a0 174 SUPERFAMILY SSF55729 1 166 4.22E-32 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMA_RS03815 67e27dcb2355b1b4a3000260c355e8a0 174 Pfam PF00583 Acetyltransferase (GNAT) family 67 149 1.1E-14 T 25-04-2016 IPR000182 GNAT domain GO:0008080 SMA_RS03815 67e27dcb2355b1b4a3000260c355e8a0 174 PANTHER PTHR23091 1 172 2.8E-42 T 25-04-2016 SMA_RS03815 67e27dcb2355b1b4a3000260c355e8a0 174 PANTHER PTHR23091:SF257 1 172 2.8E-42 T 25-04-2016 SMA_RS09760 c557c38d2d5a3312d6d27378f7b441e7 269 Pfam PF00746 Gram positive anchor 234 265 3.1E-5 T 25-04-2016 IPR019948 Gram-positive anchor SMA_RS09760 c557c38d2d5a3312d6d27378f7b441e7 269 TIGRFAM TIGR01167 LPXTG_anchor: LPXTG cell wall anchor domain 235 265 2.8E-8 T 25-04-2016 IPR019931 LPXTG cell wall anchor domain SMA_RS00045 02c8f0224e1c6620850ef0f2ea430469 123 Pfam PF04977 Septum formation initiator 42 119 1.3E-19 T 25-04-2016 IPR007060 Septum formation initiator FtsL/DivIC GO:0007049 SMA_RS00045 02c8f0224e1c6620850ef0f2ea430469 123 PANTHER PTHR40027:SF1 1 121 7.6E-26 T 25-04-2016 SMA_RS00045 02c8f0224e1c6620850ef0f2ea430469 123 PANTHER PTHR40027 1 121 7.6E-26 T 25-04-2016 SMA_RS06305 700e1956670eb0db44a895a8dd0cff8c 368 PANTHER PTHR21363:SF0 6 363 1.2E-74 T 25-04-2016 SMA_RS06305 700e1956670eb0db44a895a8dd0cff8c 368 PANTHER PTHR21363 6 363 1.2E-74 T 25-04-2016 SMA_RS06305 700e1956670eb0db44a895a8dd0cff8c 368 Pfam PF02153 Prephenate dehydrogenase 18 277 4.2E-73 T 25-04-2016 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 SMA_RS06305 700e1956670eb0db44a895a8dd0cff8c 368 SUPERFAMILY SSF48179 177 285 2.27E-32 T 25-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 SMA_RS06305 700e1956670eb0db44a895a8dd0cff8c 368 SUPERFAMILY SSF51735 6 173 1.9E-43 T 25-04-2016 IPR016040 NAD(P)-binding domain SMA_RS06305 700e1956670eb0db44a895a8dd0cff8c 368 Gene3D G3DSA:3.40.50.720 1 183 1.4E-36 T 25-04-2016 IPR016040 NAD(P)-binding domain SMA_RS09910 b4cffe68ef6c306cc1891f4ffb2de777 232 SUPERFAMILY SSF51161 84 218 1.98E-48 T 25-04-2016 IPR011004 Trimeric LpxA-like SMA_RS09910 b4cffe68ef6c306cc1891f4ffb2de777 232 PANTHER PTHR23416:SF50 53 232 8.9E-51 T 25-04-2016 SMA_RS09910 b4cffe68ef6c306cc1891f4ffb2de777 232 Hamap MF_01691 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase [dapH]. 3 231 41.526 T 25-04-2016 IPR019873 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase, DapH GO:0009089|GO:0047200 KEGG: 00300+2.3.1.89|MetaCyc: PWY-2941|UniPathway: UPA00034 SMA_RS09910 b4cffe68ef6c306cc1891f4ffb2de777 232 PANTHER PTHR23416 53 232 8.9E-51 T 25-04-2016 SMA_RS09910 b4cffe68ef6c306cc1891f4ffb2de777 232 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 87 115 0.0012 T 25-04-2016 IPR001451 Hexapeptide repeat SMA_RS09910 b4cffe68ef6c306cc1891f4ffb2de777 232 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 118 152 5.3E-9 T 25-04-2016 IPR001451 Hexapeptide repeat SMA_RS09910 b4cffe68ef6c306cc1891f4ffb2de777 232 TIGRFAM TIGR03532 DapD_Ac: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase 8 232 7.8E-110 T 25-04-2016 IPR019873 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase, DapH GO:0009089|GO:0047200 KEGG: 00300+2.3.1.89|MetaCyc: PWY-2941|UniPathway: UPA00034 SMA_RS09910 b4cffe68ef6c306cc1891f4ffb2de777 232 Gene3D G3DSA:2.160.10.10 85 221 2.9E-48 T 25-04-2016 SMA_RS09910 b4cffe68ef6c306cc1891f4ffb2de777 232 Gene3D G3DSA:3.30.70.250 4 83 1.8E-33 T 25-04-2016 SMA_RS09910 b4cffe68ef6c306cc1891f4ffb2de777 232 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 161 196 5.6E-12 T 25-04-2016 IPR001451 Hexapeptide repeat SMA_RS09910 b4cffe68ef6c306cc1891f4ffb2de777 232 Pfam PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal 6 82 2.7E-22 T 25-04-2016 IPR013710 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase, N-terminal GO:0047200 KEGG: 00300+2.3.1.89|MetaCyc: PWY-2941|UniPathway: UPA00034 SMA_RS09910 b4cffe68ef6c306cc1891f4ffb2de777 232 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 170 198 - T 25-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 SMA_RS09910 b4cffe68ef6c306cc1891f4ffb2de777 232 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 126 154 - T 25-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 SMA_RS03755 f51d9627f63cd3d546e5f3b8a32ea18b 165 Hamap MF_01398 ATP synthase subunit b [atpF]. 5 162 12.429 T 25-04-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 SMA_RS03755 f51d9627f63cd3d546e5f3b8a32ea18b 165 PANTHER PTHR33445 8 165 2.4E-34 T 25-04-2016 SMA_RS03755 f51d9627f63cd3d546e5f3b8a32ea18b 165 Pfam PF00430 ATP synthase B/B' CF(0) 13 142 3.0E-27 T 25-04-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 SMA_RS03755 f51d9627f63cd3d546e5f3b8a32ea18b 165 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 18 162 5.8E-39 T 25-04-2016 IPR005864 ATPase, F0 complex, subunit B, bacterial GO:0015078|GO:0015986|GO:0045263 SMA_RS03755 f51d9627f63cd3d546e5f3b8a32ea18b 165 SUPERFAMILY SSF81573 69 127 2.88E-7 T 25-04-2016 IPR028987 F-type ATP synthase subunit B-like, membrane domain SMA_RS02675 15a66890aea587f3b72f85753147f204 226 PANTHER PTHR35528 1 176 5.7E-41 T 25-04-2016 SMA_RS02675 15a66890aea587f3b72f85753147f204 226 PANTHER PTHR35528:SF1 1 176 5.7E-41 T 25-04-2016 SMA_RS02675 15a66890aea587f3b72f85753147f204 226 Pfam PF13610 DDE domain 72 203 6.6E-42 T 25-04-2016 IPR032874 DDE domain SMA_RS02675 15a66890aea587f3b72f85753147f204 226 Gene3D G3DSA:3.30.420.10 68 178 4.3E-7 T 25-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMA_RS02675 15a66890aea587f3b72f85753147f204 226 SUPERFAMILY SSF53098 69 184 3.79E-9 T 25-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMA_RS00380 68959b14ea9071b48e1bdccec7ce516d 68 PANTHER PTHR10916:SF0 1 68 4.5E-21 T 25-04-2016 SMA_RS00380 68959b14ea9071b48e1bdccec7ce516d 68 SUPERFAMILY SSF46561 10 68 9.03E-20 T 25-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS00380 68959b14ea9071b48e1bdccec7ce516d 68 Gene3D G3DSA:1.10.287.310 10 68 1.3E-24 T 25-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS00380 68959b14ea9071b48e1bdccec7ce516d 68 ProSitePatterns PS00579 Ribosomal protein L29 signature. 46 60 - T 25-04-2016 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS00380 68959b14ea9071b48e1bdccec7ce516d 68 TIGRFAM TIGR00012 L29: ribosomal protein uL29 12 67 4.5E-24 T 25-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS00380 68959b14ea9071b48e1bdccec7ce516d 68 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 67 16.251 T 25-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS00380 68959b14ea9071b48e1bdccec7ce516d 68 PANTHER PTHR10916 1 68 4.5E-21 T 25-04-2016 SMA_RS00380 68959b14ea9071b48e1bdccec7ce516d 68 Pfam PF00831 Ribosomal L29 protein 11 67 1.8E-22 T 25-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS03150 cfc2b0d07b76680f4cfd4bfa206ee4b2 71 Gene3D G3DSA:1.10.287.1040 3 69 2.1E-22 T 25-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 SMA_RS03150 cfc2b0d07b76680f4cfd4bfa206ee4b2 71 PIRSF PIRSF006488 1 71 1.0E-17 T 25-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 SMA_RS03150 cfc2b0d07b76680f4cfd4bfa206ee4b2 71 SUPERFAMILY SSF116842 3 69 3.27E-18 T 25-04-2016 SMA_RS03150 cfc2b0d07b76680f4cfd4bfa206ee4b2 71 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 6 61 3.0E-21 T 25-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 SMA_RS03150 cfc2b0d07b76680f4cfd4bfa206ee4b2 71 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 1 48 7.0E-18 T 25-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 SMA_RS03150 cfc2b0d07b76680f4cfd4bfa206ee4b2 71 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 6 66 14.22 T 25-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 SMA_RS03150 cfc2b0d07b76680f4cfd4bfa206ee4b2 71 PANTHER PTHR34137 1 70 2.0E-20 T 25-04-2016 SMA_RS03150 cfc2b0d07b76680f4cfd4bfa206ee4b2 71 Pfam PF02609 Exonuclease VII small subunit 7 56 5.5E-18 T 25-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 SMA_RS00025 2db6502d351fb4fbef1174b437941a09 371 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 371 7.2E-149 T 25-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 SMA_RS00025 2db6502d351fb4fbef1174b437941a09 371 PANTHER PTHR23305 1 371 1.6E-204 T 25-04-2016 SMA_RS00025 2db6502d351fb4fbef1174b437941a09 371 SUPERFAMILY SSF81271 287 371 1.05E-35 T 25-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 SMA_RS00025 2db6502d351fb4fbef1174b437941a09 371 PANTHER PTHR23305:SF12 1 371 1.6E-204 T 25-04-2016 SMA_RS00025 2db6502d351fb4fbef1174b437941a09 371 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 371 44.054 T 25-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 SMA_RS00025 2db6502d351fb4fbef1174b437941a09 371 Gene3D G3DSA:1.10.150.300 135 205 5.1E-30 T 25-04-2016 IPR023192 TGS-like domain SMA_RS00025 2db6502d351fb4fbef1174b437941a09 371 PIRSF PIRSF006641 1 371 2.4E-154 T 25-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 SMA_RS00025 2db6502d351fb4fbef1174b437941a09 371 SUPERFAMILY SSF52540 3 309 1.17E-83 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS00025 2db6502d351fb4fbef1174b437941a09 371 Pfam PF01926 50S ribosome-binding GTPase 5 113 1.4E-23 T 25-04-2016 IPR006073 GTP binding domain GO:0005525 SMA_RS00025 2db6502d351fb4fbef1174b437941a09 371 Gene3D G3DSA:3.40.50.300 4 134 1.7E-46 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS00025 2db6502d351fb4fbef1174b437941a09 371 Gene3D G3DSA:3.40.50.300 206 274 1.7E-46 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS00025 2db6502d351fb4fbef1174b437941a09 371 Pfam PF06071 Protein of unknown function (DUF933) 287 370 2.6E-40 T 25-04-2016 IPR013029 Domain of unknown function DUF933 SMA_RS00025 2db6502d351fb4fbef1174b437941a09 371 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 8.0E-36 T 25-04-2016 IPR006073 GTP binding domain GO:0005525 SMA_RS00025 2db6502d351fb4fbef1174b437941a09 371 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 85 8.0E-36 T 25-04-2016 IPR006073 GTP binding domain GO:0005525 SMA_RS00025 2db6502d351fb4fbef1174b437941a09 371 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 8.0E-36 T 25-04-2016 IPR006073 GTP binding domain GO:0005525 SMA_RS00025 2db6502d351fb4fbef1174b437941a09 371 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 8.0E-36 T 25-04-2016 IPR006073 GTP binding domain GO:0005525 SMA_RS00025 2db6502d351fb4fbef1174b437941a09 371 Gene3D G3DSA:3.10.20.30 275 371 6.5E-50 T 25-04-2016 IPR012675 Beta-grasp domain SMA_RS02495 cab12cd37eb22dfc12b918de830fa049 440 Pfam PF01029 NusB family 8 131 2.8E-29 T 25-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 SMA_RS02495 cab12cd37eb22dfc12b918de830fa049 440 Gene3D G3DSA:1.10.940.10 6 159 6.5E-44 T 25-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 SMA_RS02495 cab12cd37eb22dfc12b918de830fa049 440 PANTHER PTHR22807 18 439 4.6E-114 T 25-04-2016 SMA_RS02495 cab12cd37eb22dfc12b918de830fa049 440 SUPERFAMILY SSF53335 146 438 2.63E-61 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMA_RS02495 cab12cd37eb22dfc12b918de830fa049 440 TIGRFAM TIGR00563 rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase 10 437 1.9E-110 T 25-04-2016 IPR004573 rRNA small subunit methyltransferase B GO:0006364|GO:0008649 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SMA_RS02495 cab12cd37eb22dfc12b918de830fa049 440 Pfam PF01189 16S rRNA methyltransferase RsmB/F 244 436 5.6E-54 T 25-04-2016 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SMA_RS02495 cab12cd37eb22dfc12b918de830fa049 440 SUPERFAMILY SSF48013 5 135 5.63E-35 T 25-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 SMA_RS02495 cab12cd37eb22dfc12b918de830fa049 440 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 421 438 1.1E-27 T 25-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SMA_RS02495 cab12cd37eb22dfc12b918de830fa049 440 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 225 239 1.1E-27 T 25-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SMA_RS02495 cab12cd37eb22dfc12b918de830fa049 440 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 322 334 1.1E-27 T 25-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SMA_RS02495 cab12cd37eb22dfc12b918de830fa049 440 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 254 264 1.1E-27 T 25-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SMA_RS02495 cab12cd37eb22dfc12b918de830fa049 440 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 372 388 1.1E-27 T 25-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SMA_RS02495 cab12cd37eb22dfc12b918de830fa049 440 Gene3D G3DSA:3.40.50.150 235 438 7.1E-57 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMA_RS02495 cab12cd37eb22dfc12b918de830fa049 440 PANTHER PTHR22807:SF30 18 439 4.6E-114 T 25-04-2016 SMA_RS02495 cab12cd37eb22dfc12b918de830fa049 440 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 321 332 - T 25-04-2016 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SMA_RS04455 908eb1acf9b64a2061645c72497feb04 268 PIRSF PIRSF006816 11 268 3.1E-70 T 25-04-2016 IPR012165 Cytochrome-c3 hydrogenase, gamma subunit GO:0006221|GO:0050660|GO:0051537 UniPathway: UPA00070 SMA_RS04455 908eb1acf9b64a2061645c72497feb04 268 PRINTS PR00409 Phthalate dioxygenase reductase family signature 47 59 7.9E-6 T 25-04-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 SMA_RS04455 908eb1acf9b64a2061645c72497feb04 268 PRINTS PR00409 Phthalate dioxygenase reductase family signature 198 206 7.9E-6 T 25-04-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 SMA_RS04455 908eb1acf9b64a2061645c72497feb04 268 PRINTS PR00409 Phthalate dioxygenase reductase family signature 119 138 7.9E-6 T 25-04-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 SMA_RS04455 908eb1acf9b64a2061645c72497feb04 268 Hamap MF_01211 Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit [pyrK]. 13 268 36.347 T 25-04-2016 IPR023455 Dihydroorotate dehydrogenase electron transfer subunit UniPathway: UPA00070 SMA_RS04455 908eb1acf9b64a2061645c72497feb04 268 SUPERFAMILY SSF63380 15 107 1.56E-21 T 25-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 SMA_RS04455 908eb1acf9b64a2061645c72497feb04 268 Gene3D G3DSA:2.40.30.10 13 105 1.3E-30 T 25-04-2016 SMA_RS04455 908eb1acf9b64a2061645c72497feb04 268 Pfam PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B 226 266 1.9E-18 T 25-04-2016 IPR019480 Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain UniPathway: UPA00070 SMA_RS04455 908eb1acf9b64a2061645c72497feb04 268 Pfam PF00970 Oxidoreductase FAD-binding domain 27 105 1.4E-4 T 25-04-2016 IPR008333 Oxidoreductase, FAD-binding domain SMA_RS04455 908eb1acf9b64a2061645c72497feb04 268 PANTHER PTHR19370 18 256 8.3E-62 T 25-04-2016 SMA_RS04455 908eb1acf9b64a2061645c72497feb04 268 Pfam PF00175 Oxidoreductase NAD-binding domain 120 212 4.2E-6 T 25-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 SMA_RS04455 908eb1acf9b64a2061645c72497feb04 268 PANTHER PTHR19370:SF68 18 256 8.3E-62 T 25-04-2016 SMA_RS04455 908eb1acf9b64a2061645c72497feb04 268 Gene3D G3DSA:3.40.50.80 113 218 2.6E-35 T 25-04-2016 SMA_RS04455 908eb1acf9b64a2061645c72497feb04 268 SUPERFAMILY SSF52343 102 267 1.83E-33 T 25-04-2016 SMA_RS04455 908eb1acf9b64a2061645c72497feb04 268 Gene3D G3DSA:2.10.240.10 226 267 2.7E-18 T 25-04-2016 IPR019480 Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain UniPathway: UPA00070 SMA_RS00850 273e879796456c8ff15cda4caafa69b4 434 Gene3D G3DSA:3.40.190.10 50 171 2.0E-15 T 25-04-2016 SMA_RS00850 273e879796456c8ff15cda4caafa69b4 434 Pfam PF13416 Bacterial extracellular solute-binding protein 60 366 2.9E-27 T 25-04-2016 SMA_RS00850 273e879796456c8ff15cda4caafa69b4 434 Gene3D G3DSA:3.40.190.10 172 361 3.7E-28 T 25-04-2016 SMA_RS00850 273e879796456c8ff15cda4caafa69b4 434 SUPERFAMILY SSF53850 46 429 3.15E-51 T 25-04-2016 SMA_RS00850 273e879796456c8ff15cda4caafa69b4 434 PANTHER PTHR30061 46 370 1.8E-35 T 25-04-2016 SMA_RS02255 4806b7690691f7cf6a5f81a9a19f02e4 205 PANTHER PTHR30506:SF3 1 203 8.2E-65 T 25-04-2016 SMA_RS02255 4806b7690691f7cf6a5f81a9a19f02e4 205 Pfam PF03458 UPF0126 domain 8 80 2.4E-17 T 25-04-2016 IPR005115 Uncharacterised domain UPF0126 SMA_RS02255 4806b7690691f7cf6a5f81a9a19f02e4 205 Pfam PF03458 UPF0126 domain 96 167 1.8E-18 T 25-04-2016 IPR005115 Uncharacterised domain UPF0126 SMA_RS02255 4806b7690691f7cf6a5f81a9a19f02e4 205 PANTHER PTHR30506 1 203 8.2E-65 T 25-04-2016 SMA_RS07005 223df562d419130bbcd9fbe75708dcf0 451 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 2 18 2.7E-17 T 25-04-2016 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 SMA_RS07005 223df562d419130bbcd9fbe75708dcf0 451 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 108 122 2.7E-17 T 25-04-2016 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 SMA_RS07005 223df562d419130bbcd9fbe75708dcf0 451 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 154 167 2.7E-17 T 25-04-2016 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 SMA_RS07005 223df562d419130bbcd9fbe75708dcf0 451 SUPERFAMILY SSF53335 377 440 2.09E-89 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMA_RS07005 223df562d419130bbcd9fbe75708dcf0 451 SUPERFAMILY SSF53335 1 207 2.09E-89 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMA_RS07005 223df562d419130bbcd9fbe75708dcf0 451 SUPERFAMILY SSF53335 236 295 2.09E-89 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMA_RS07005 223df562d419130bbcd9fbe75708dcf0 451 Gene3D G3DSA:3.90.120.10 257 317 1.5E-4 T 25-04-2016 SMA_RS07005 223df562d419130bbcd9fbe75708dcf0 451 Pfam PF00145 C-5 cytosine-specific DNA methylase 1 438 7.1E-88 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMA_RS07005 223df562d419130bbcd9fbe75708dcf0 451 TIGRFAM TIGR00675 dcm: DNA (cytosine-5-)-methyltransferase 3 437 2.2E-90 T 25-04-2016 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 SMA_RS07005 223df562d419130bbcd9fbe75708dcf0 451 Gene3D G3DSA:3.40.50.150 1 181 7.8E-69 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMA_RS07005 223df562d419130bbcd9fbe75708dcf0 451 ProSitePatterns PS00094 C-5 cytosine-specific DNA methylases active site. 69 81 - T 25-04-2016 IPR018117 DNA methylase, C-5 cytosine-specific, active site KEGG: 00270+2.1.1.37 SMA_RS07005 223df562d419130bbcd9fbe75708dcf0 451 Gene3D G3DSA:3.90.120.10 336 426 5.7E-15 T 25-04-2016 SMA_RS07005 223df562d419130bbcd9fbe75708dcf0 451 PANTHER PTHR10629 1 445 1.7E-54 T 25-04-2016 SMA_RS07005 223df562d419130bbcd9fbe75708dcf0 451 PANTHER PTHR10629:SF31 1 445 1.7E-54 T 25-04-2016 SMA_RS04730 29ffa09460cd0b0334d797e1afada6f1 215 SMART SM00881 80 183 9.1E-13 T 25-04-2016 IPR003781 CoA-binding GO:0048037 SMA_RS04730 29ffa09460cd0b0334d797e1afada6f1 215 PANTHER PTHR35786:SF1 4 214 4.1E-99 T 25-04-2016 SMA_RS04730 29ffa09460cd0b0334d797e1afada6f1 215 Pfam PF02629 CoA binding domain 83 182 2.2E-24 T 25-04-2016 IPR003781 CoA-binding GO:0048037 SMA_RS04730 29ffa09460cd0b0334d797e1afada6f1 215 SUPERFAMILY SSF51735 83 209 1.71E-26 T 25-04-2016 IPR016040 NAD(P)-binding domain SMA_RS04730 29ffa09460cd0b0334d797e1afada6f1 215 Pfam PF06971 Putative DNA-binding protein N-terminus 7 54 1.8E-18 T 25-04-2016 IPR009718 Rex DNA-binding, C-terminal domain GO:0005737|GO:0045892|GO:0051775 SMA_RS04730 29ffa09460cd0b0334d797e1afada6f1 215 Hamap MF_01131 Redox-sensing transcriptional repressor Rex [rex]. 2 212 39.264 T 25-04-2016 IPR022876 Redox-sensing transcriptional repressor Rex GO:0005737|GO:0045892|GO:0051775 SMA_RS04730 29ffa09460cd0b0334d797e1afada6f1 215 Gene3D G3DSA:1.10.10.10 5 76 3.4E-31 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMA_RS04730 29ffa09460cd0b0334d797e1afada6f1 215 PANTHER PTHR35786 4 214 4.1E-99 T 25-04-2016 SMA_RS04730 29ffa09460cd0b0334d797e1afada6f1 215 Gene3D G3DSA:3.40.50.720 78 214 4.2E-51 T 25-04-2016 IPR016040 NAD(P)-binding domain SMA_RS04730 29ffa09460cd0b0334d797e1afada6f1 215 SUPERFAMILY SSF46785 8 79 3.67E-21 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMA_RS03975 2c2b0b9d5e8a9bcee03403afabd75b35 100 Pfam PF12840 Helix-turn-helix domain 5 77 7.0E-11 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMA_RS03975 2c2b0b9d5e8a9bcee03403afabd75b35 100 SMART SM00418 5 97 2.4E-9 T 25-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SMA_RS03975 2c2b0b9d5e8a9bcee03403afabd75b35 100 PANTHER PTHR33154 1 100 8.2E-22 T 25-04-2016 SMA_RS03975 2c2b0b9d5e8a9bcee03403afabd75b35 100 SUPERFAMILY SSF46785 4 96 1.26E-20 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMA_RS03975 2c2b0b9d5e8a9bcee03403afabd75b35 100 Gene3D G3DSA:1.10.10.10 3 98 8.2E-28 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMA_RS08005 13124be56bd70224d947f26426e4f765 161 PANTHER PTHR10815:SF5 1 161 2.7E-50 T 25-04-2016 SMA_RS08005 13124be56bd70224d947f26426e4f765 161 SUPERFAMILY SSF46767 78 159 7.72E-31 T 25-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 SMA_RS08005 13124be56bd70224d947f26426e4f765 161 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 128 134 - T 25-04-2016 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 SMA_RS08005 13124be56bd70224d947f26426e4f765 161 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 80 158 7.1E-34 T 25-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 SMA_RS08005 13124be56bd70224d947f26426e4f765 161 SUPERFAMILY SSF53155 5 84 1.96E-12 T 25-04-2016 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 SMA_RS08005 13124be56bd70224d947f26426e4f765 161 PANTHER PTHR10815 1 161 2.7E-50 T 25-04-2016 SMA_RS08005 13124be56bd70224d947f26426e4f765 161 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 79 157 3.0E-34 T 25-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 SMA_RS08005 13124be56bd70224d947f26426e4f765 161 Gene3D G3DSA:1.10.10.10 78 160 6.2E-37 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMA_RS05510 24aee710167675272ef9a3d5fc275ae2 272 Gene3D G3DSA:3.40.50.1000 1 74 2.6E-45 T 25-04-2016 IPR023214 HAD-like domain SMA_RS05510 24aee710167675272ef9a3d5fc275ae2 272 Gene3D G3DSA:3.40.50.1000 181 267 2.6E-45 T 25-04-2016 IPR023214 HAD-like domain SMA_RS05510 24aee710167675272ef9a3d5fc275ae2 272 ProSitePatterns PS01229 Hypothetical cof family signature 2. 216 238 - T 25-04-2016 SMA_RS05510 24aee710167675272ef9a3d5fc275ae2 272 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 262 4.2E-53 T 25-04-2016 IPR023214 HAD-like domain SMA_RS05510 24aee710167675272ef9a3d5fc275ae2 272 PANTHER PTHR10000 1 268 4.7E-78 T 25-04-2016 SMA_RS05510 24aee710167675272ef9a3d5fc275ae2 272 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 6 235 2.0E-19 T 25-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 SMA_RS05510 24aee710167675272ef9a3d5fc275ae2 272 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 262 1.8E-51 T 25-04-2016 IPR000150 Cof protein GO:0016787 SMA_RS05510 24aee710167675272ef9a3d5fc275ae2 272 SUPERFAMILY SSF56784 1 267 4.2E-60 T 25-04-2016 IPR023214 HAD-like domain SMA_RS05510 24aee710167675272ef9a3d5fc275ae2 272 Gene3D G3DSA:3.30.1240.10 86 180 2.3E-19 T 25-04-2016 SMA_RS05510 24aee710167675272ef9a3d5fc275ae2 272 PANTHER PTHR10000:SF27 1 268 4.7E-78 T 25-04-2016 SMA_RS09455 0f6e49022672745eede5ffc3a320dc73 207 Hamap MF_00271 V-type ATP synthase subunit D [atpD]. 3 207 18.82 T 25-04-2016 IPR002699 ATPase, V1 complex, subunit D GO:0042626 SMA_RS09455 0f6e49022672745eede5ffc3a320dc73 207 TIGRFAM TIGR00309 V_ATPase_subD: V-type ATPase, D subunit 5 207 1.5E-46 T 25-04-2016 IPR002699 ATPase, V1 complex, subunit D GO:0042626 SMA_RS09455 0f6e49022672745eede5ffc3a320dc73 207 Pfam PF01813 ATP synthase subunit D 12 207 1.5E-50 T 25-04-2016 IPR002699 ATPase, V1 complex, subunit D GO:0042626 SMA_RS09455 0f6e49022672745eede5ffc3a320dc73 207 PANTHER PTHR11671 1 207 2.0E-66 T 25-04-2016 IPR002699 ATPase, V1 complex, subunit D GO:0042626 SMA_RS09455 0f6e49022672745eede5ffc3a320dc73 207 PANTHER PTHR11671:SF2 1 207 2.0E-66 T 25-04-2016 SMA_RS05185 6797d0b42606a1a29ede59e824f9d11d 181 Pfam PF02441 Flavoprotein 4 132 7.8E-38 T 25-04-2016 IPR003382 Flavoprotein GO:0003824 SMA_RS05185 6797d0b42606a1a29ede59e824f9d11d 181 SUPERFAMILY SSF52507 3 177 1.44E-57 T 25-04-2016 IPR003382 Flavoprotein GO:0003824 SMA_RS05185 6797d0b42606a1a29ede59e824f9d11d 181 TIGRFAM TIGR02113 coaC_strep: phosphopantothenoylcysteine decarboxylase 3 178 2.1E-97 T 25-04-2016 IPR011847 Phosphopantothenoylcysteine decarboxylase KEGG: 00770+4.1.1.36|UniPathway: UPA00241 SMA_RS05185 6797d0b42606a1a29ede59e824f9d11d 181 PANTHER PTHR14359 3 181 8.1E-73 T 25-04-2016 SMA_RS05185 6797d0b42606a1a29ede59e824f9d11d 181 Gene3D G3DSA:3.40.50.1950 3 179 2.6E-63 T 25-04-2016 IPR003382 Flavoprotein GO:0003824 SMA_RS05185 6797d0b42606a1a29ede59e824f9d11d 181 PANTHER PTHR14359:SF20 3 181 8.1E-73 T 25-04-2016 SMA_RS04220 669ea52f701159a507dd230d9101d8ca 166 Pfam PF03692 Putative zinc- or iron-chelating domain 51 139 3.1E-16 T 25-04-2016 IPR005358 Putative zinc- or iron-chelating domain containing protein SMA_RS00800 f9b409210500ab71a6bcb482d558e9c0 97 Pfam PF15513 Domain of unknown function (DUF4651) 34 93 2.0E-26 T 25-04-2016 IPR028105 Protein of unknown function DUF4651 SMA_RS00340 debbbc76e1ee241187c6021191547c6f 208 PANTHER PTHR11229 1 208 1.5E-109 T 25-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS00340 debbbc76e1ee241187c6021191547c6f 208 SUPERFAMILY SSF50447 1 205 1.77E-79 T 25-04-2016 IPR009000 Translation protein, beta-barrel domain SMA_RS00340 debbbc76e1ee241187c6021191547c6f 208 Gene3D G3DSA:2.40.30.10 155 206 6.0E-15 T 25-04-2016 SMA_RS00340 debbbc76e1ee241187c6021191547c6f 208 Gene3D G3DSA:2.40.30.10 4 33 6.0E-15 T 25-04-2016 SMA_RS00340 debbbc76e1ee241187c6021191547c6f 208 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 2 204 38.42 T 25-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS00340 debbbc76e1ee241187c6021191547c6f 208 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 4 201 7.4E-84 T 25-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS00340 debbbc76e1ee241187c6021191547c6f 208 ProSitePatterns PS00474 Ribosomal protein L3 signature. 100 123 - T 25-04-2016 IPR019926 Ribosomal protein L3, conserved site SMA_RS00340 debbbc76e1ee241187c6021191547c6f 208 Pfam PF00297 Ribosomal protein L3 97 176 9.8E-15 T 25-04-2016 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS00340 debbbc76e1ee241187c6021191547c6f 208 Gene3D G3DSA:4.10.960.10 82 154 3.4E-33 T 25-04-2016 SMA_RS03580 3b33af38f13a6289b5e004efb709128a 314 SUPERFAMILY SSF64182 15 308 1.44E-74 T 25-04-2016 SMA_RS03580 3b33af38f13a6289b5e004efb709128a 314 Pfam PF01368 DHH family 18 153 4.8E-13 T 25-04-2016 IPR001667 DDH domain SMA_RS03580 3b33af38f13a6289b5e004efb709128a 314 Gene3D G3DSA:3.90.1640.10 16 190 1.2E-31 T 25-04-2016 SMA_RS03580 3b33af38f13a6289b5e004efb709128a 314 Pfam PF02272 DHHA1 domain 251 298 2.0E-6 T 25-04-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7 SMA_RS03580 3b33af38f13a6289b5e004efb709128a 314 PANTHER PTHR13734:SF42 1 161 4.0E-27 T 25-04-2016 SMA_RS03580 3b33af38f13a6289b5e004efb709128a 314 PANTHER PTHR13734:SF42 264 301 4.0E-27 T 25-04-2016 SMA_RS03580 3b33af38f13a6289b5e004efb709128a 314 PANTHER PTHR13734 1 161 4.0E-27 T 25-04-2016 SMA_RS03580 3b33af38f13a6289b5e004efb709128a 314 PANTHER PTHR13734 264 301 4.0E-27 T 25-04-2016 SMA_RS01335 5f7014cf82af63df99767ebcbadae232 249 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 193 210 - T 25-04-2016 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 SMA_RS01335 5f7014cf82af63df99767ebcbadae232 249 SUPERFAMILY SSF64005 11 242 3.66E-91 T 25-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 SMA_RS01335 5f7014cf82af63df99767ebcbadae232 249 Gene3D G3DSA:3.40.1180.10 8 248 2.0E-101 T 25-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 SMA_RS01335 5f7014cf82af63df99767ebcbadae232 249 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 16 248 41.271 T 25-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 SMA_RS01335 5f7014cf82af63df99767ebcbadae232 249 PANTHER PTHR10291 10 249 2.1E-126 T 25-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 SMA_RS01335 5f7014cf82af63df99767ebcbadae232 249 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 16 247 4.9E-85 T 25-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 SMA_RS01335 5f7014cf82af63df99767ebcbadae232 249 Pfam PF01255 Putative undecaprenyl diphosphate synthase 23 247 3.8E-83 T 25-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 SMA_RS02135 a3a3cbdc6c7d0a5a82f78d50ae3f89b2 147 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 6 132 1.5E-34 T 25-04-2016 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 SMA_RS02135 a3a3cbdc6c7d0a5a82f78d50ae3f89b2 147 Gene3D G3DSA:3.40.50.300 2 144 2.2E-44 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS02135 a3a3cbdc6c7d0a5a82f78d50ae3f89b2 147 SUPERFAMILY SSF52540 16 107 1.92E-21 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS02135 a3a3cbdc6c7d0a5a82f78d50ae3f89b2 147 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 5 126 1.1E-31 T 25-04-2016 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 SMA_RS02135 a3a3cbdc6c7d0a5a82f78d50ae3f89b2 147 PANTHER PTHR33540 1 146 3.0E-40 T 25-04-2016 SMA_RS01440 70b74ca818479a35ee7db5c2efd949fd 249 SUPERFAMILY SSF75217 75 246 6.54E-49 T 25-04-2016 IPR029028 Alpha/beta knot methyltransferases SMA_RS01440 70b74ca818479a35ee7db5c2efd949fd 249 Pfam PF00588 SpoU rRNA Methylase family 102 241 2.9E-42 T 25-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 SMA_RS01440 70b74ca818479a35ee7db5c2efd949fd 249 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 12 85 3.2E-15 T 25-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 SMA_RS01440 70b74ca818479a35ee7db5c2efd949fd 249 SUPERFAMILY SSF55315 6 82 2.59E-18 T 25-04-2016 IPR029064 50S ribosomal protein L30e-like SMA_RS01440 70b74ca818479a35ee7db5c2efd949fd 249 SMART SM00967 12 86 6.0E-15 T 25-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 SMA_RS01440 70b74ca818479a35ee7db5c2efd949fd 249 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 11 247 2.1E-80 T 25-04-2016 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 SMA_RS01440 70b74ca818479a35ee7db5c2efd949fd 249 Gene3D G3DSA:3.30.1330.30 7 81 4.1E-23 T 25-04-2016 IPR029064 50S ribosomal protein L30e-like SMA_RS01440 70b74ca818479a35ee7db5c2efd949fd 249 Gene3D G3DSA:3.40.1280.10 96 246 1.3E-52 T 25-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal SMA_RS01440 70b74ca818479a35ee7db5c2efd949fd 249 PANTHER PTHR12029 1 245 1.1E-83 T 25-04-2016 SMA_RS01050 0d54209c16f7b122377c919ead5aca62 156 Pfam PF11217 Protein of unknown function (DUF3013) 1 155 1.1E-63 T 25-04-2016 IPR021380 Protein of unknown function DUF3013 SMA_RS03040 921583061725fb285f763e67900a174a 224 PANTHER PTHR10146 9 223 1.1E-73 T 25-04-2016 IPR011078 Uncharacterised protein family UPF0001 SMA_RS03040 921583061725fb285f763e67900a174a 224 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 1 224 1.6E-50 T 25-04-2016 IPR011078 Uncharacterised protein family UPF0001 SMA_RS03040 921583061725fb285f763e67900a174a 224 PIRSF PIRSF004848 1 224 3.3E-62 T 25-04-2016 IPR011078 Uncharacterised protein family UPF0001 SMA_RS03040 921583061725fb285f763e67900a174a 224 Gene3D G3DSA:3.20.20.10 2 223 3.2E-71 T 25-04-2016 IPR029066 PLP-binding barrel SMA_RS03040 921583061725fb285f763e67900a174a 224 Pfam PF01168 Alanine racemase, N-terminal domain 18 223 1.2E-15 T 25-04-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SMA_RS03040 921583061725fb285f763e67900a174a 224 SUPERFAMILY SSF51419 1 223 4.97E-66 T 25-04-2016 IPR029066 PLP-binding barrel SMA_RS08555 6158c391ec10dfb23cf1313c4607515f 460 PANTHER PTHR11014 288 460 4.4E-112 T 25-04-2016 SMA_RS08555 6158c391ec10dfb23cf1313c4607515f 460 PANTHER PTHR11014 15 268 4.4E-112 T 25-04-2016 SMA_RS08555 6158c391ec10dfb23cf1313c4607515f 460 PANTHER PTHR11014:SF15 288 460 4.4E-112 T 25-04-2016 SMA_RS08555 6158c391ec10dfb23cf1313c4607515f 460 PANTHER PTHR11014:SF15 15 268 4.4E-112 T 25-04-2016 SMA_RS08555 6158c391ec10dfb23cf1313c4607515f 460 Pfam PF07687 Peptidase dimerisation domain 198 356 1.9E-16 T 25-04-2016 IPR011650 Peptidase M20, dimerisation domain SMA_RS08555 6158c391ec10dfb23cf1313c4607515f 460 SUPERFAMILY SSF53187 370 455 4.86E-49 T 25-04-2016 SMA_RS08555 6158c391ec10dfb23cf1313c4607515f 460 SUPERFAMILY SSF53187 18 200 4.86E-49 T 25-04-2016 SMA_RS08555 6158c391ec10dfb23cf1313c4607515f 460 Pfam PF01546 Peptidase family M20/M25/M40 85 453 5.0E-35 T 25-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 SMA_RS08555 6158c391ec10dfb23cf1313c4607515f 460 Gene3D G3DSA:3.40.630.10 395 456 3.0E-52 T 25-04-2016 SMA_RS08555 6158c391ec10dfb23cf1313c4607515f 460 Gene3D G3DSA:3.40.630.10 21 210 3.0E-52 T 25-04-2016 SMA_RS08555 6158c391ec10dfb23cf1313c4607515f 460 Gene3D G3DSA:3.30.70.360 211 368 1.5E-48 T 25-04-2016 IPR011650 Peptidase M20, dimerisation domain SMA_RS07950 c92be72827d978ba1ea2e8ce1061309c 112 PANTHER PTHR33169:SF10 1 103 5.2E-37 T 25-04-2016 SMA_RS07950 c92be72827d978ba1ea2e8ce1061309c 112 PANTHER PTHR33169 1 103 5.2E-37 T 25-04-2016 SMA_RS07950 c92be72827d978ba1ea2e8ce1061309c 112 SUPERFAMILY SSF46785 11 102 7.1E-23 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMA_RS07950 c92be72827d978ba1ea2e8ce1061309c 112 Gene3D G3DSA:1.10.10.10 2 104 3.1E-29 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMA_RS07950 c92be72827d978ba1ea2e8ce1061309c 112 Pfam PF03551 Transcriptional regulator PadR-like family 15 85 1.1E-21 T 25-04-2016 IPR005149 Transcription regulator PadR, N-terminal SMA_RS03980 0e331f0a63d4554a9b352d55383f0d18 395 Gene3D G3DSA:3.20.20.70 4 342 2.8E-92 T 25-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SMA_RS03980 0e331f0a63d4554a9b352d55383f0d18 395 PANTHER PTHR22893 14 342 1.5E-87 T 25-04-2016 SMA_RS03980 0e331f0a63d4554a9b352d55383f0d18 395 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 15 337 1.3E-63 T 25-04-2016 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 SMA_RS03980 0e331f0a63d4554a9b352d55383f0d18 395 SUPERFAMILY SSF51395 4 339 2.38E-89 T 25-04-2016 SMA_RS08390 93bc3ef279e347f1869ccea1c21facb7 65 Pfam PF13673 Acetyltransferase (GNAT) domain 1 60 1.3E-5 T 25-04-2016 IPR000182 GNAT domain GO:0008080 SMA_RS08390 93bc3ef279e347f1869ccea1c21facb7 65 SUPERFAMILY SSF55729 1 59 2.2E-9 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMA_RS08390 93bc3ef279e347f1869ccea1c21facb7 65 Gene3D G3DSA:3.40.630.30 1 60 2.6E-15 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMA_RS04195 82b7c3a6fbd2f960aa707616f97dad4b 395 Pfam PF11187 Protein of unknown function (DUF2974) 84 308 5.5E-72 T 25-04-2016 IPR024499 Protein of unknown function DUF2974 SMA_RS04195 82b7c3a6fbd2f960aa707616f97dad4b 395 Gene3D G3DSA:3.40.50.1820 103 223 2.0E-6 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMA_RS04195 82b7c3a6fbd2f960aa707616f97dad4b 395 SUPERFAMILY SSF53474 89 234 4.17E-15 T 25-04-2016 IPR029058 Alpha/Beta hydrolase fold SMA_RS06490 8a2ac78023cdd0e8f46b3d01d24f7d72 284 Pfam PF04321 RmlD substrate binding domain 2 280 8.1E-107 T 25-04-2016 IPR029903 RmlD-like substrate binding domain SMA_RS06490 8a2ac78023cdd0e8f46b3d01d24f7d72 284 TIGRFAM TIGR01214 rmlD: dTDP-4-dehydrorhamnose reductase 2 279 1.9E-83 T 25-04-2016 IPR005913 dTDP-4-dehydrorhamnose reductase family SMA_RS06490 8a2ac78023cdd0e8f46b3d01d24f7d72 284 PANTHER PTHR10491 1 280 1.0E-95 T 25-04-2016 IPR005913 dTDP-4-dehydrorhamnose reductase family SMA_RS06490 8a2ac78023cdd0e8f46b3d01d24f7d72 284 SUPERFAMILY SSF51735 2 280 1.29E-85 T 25-04-2016 IPR016040 NAD(P)-binding domain SMA_RS06490 8a2ac78023cdd0e8f46b3d01d24f7d72 284 PANTHER PTHR10491:SF4 1 280 1.0E-95 T 25-04-2016 SMA_RS06490 8a2ac78023cdd0e8f46b3d01d24f7d72 284 Gene3D G3DSA:3.40.50.720 2 229 1.2E-60 T 25-04-2016 IPR016040 NAD(P)-binding domain SMA_RS06400 88ee60e8b99af3dc90ec513434f04797 446 SUPERFAMILY SSF54001 327 443 4.9E-22 T 25-04-2016 SMA_RS06400 88ee60e8b99af3dc90ec513434f04797 446 Pfam PF08481 GBS Bsp-like repeat 36 121 2.4E-24 T 25-04-2016 IPR013688 GBS Bsp-like SMA_RS06400 88ee60e8b99af3dc90ec513434f04797 446 Pfam PF08481 GBS Bsp-like repeat 156 209 3.9E-12 T 25-04-2016 IPR013688 GBS Bsp-like SMA_RS06400 88ee60e8b99af3dc90ec513434f04797 446 Pfam PF08481 GBS Bsp-like repeat 223 307 9.9E-27 T 25-04-2016 IPR013688 GBS Bsp-like SMA_RS06400 88ee60e8b99af3dc90ec513434f04797 446 PRINTS PR01852 Streptococcal non-M secreted SibA protein signature 408 431 2.1E-29 T 25-04-2016 IPR009148 Streptococcal non-M secreted SibA SMA_RS06400 88ee60e8b99af3dc90ec513434f04797 446 PRINTS PR01852 Streptococcal non-M secreted SibA protein signature 363 387 2.1E-29 T 25-04-2016 IPR009148 Streptococcal non-M secreted SibA SMA_RS06400 88ee60e8b99af3dc90ec513434f04797 446 PRINTS PR01852 Streptococcal non-M secreted SibA protein signature 338 360 2.1E-29 T 25-04-2016 IPR009148 Streptococcal non-M secreted SibA SMA_RS06400 88ee60e8b99af3dc90ec513434f04797 446 Pfam PF05257 CHAP domain 335 415 3.7E-14 T 25-04-2016 IPR007921 CHAP domain SMA_RS05690 e7a8e7a6064dcf0c7e6b3c6a5fc303de 74 Pfam PF01381 Helix-turn-helix 5 59 1.3E-15 T 25-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SMA_RS05690 e7a8e7a6064dcf0c7e6b3c6a5fc303de 74 PANTHER PTHR10245 3 61 3.2E-13 T 25-04-2016 SMA_RS05690 e7a8e7a6064dcf0c7e6b3c6a5fc303de 74 SUPERFAMILY SSF47413 3 64 6.7E-16 T 25-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SMA_RS05690 e7a8e7a6064dcf0c7e6b3c6a5fc303de 74 SMART SM00530 4 59 4.7E-15 T 25-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SMA_RS05690 e7a8e7a6064dcf0c7e6b3c6a5fc303de 74 Gene3D G3DSA:1.10.260.40 3 62 1.8E-19 T 25-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SMA_RS01210 b71fbf9e060b4b04d1363992cc8d6d53 157 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 4 155 1.8E-29 T 25-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SMA_RS01210 b71fbf9e060b4b04d1363992cc8d6d53 157 PANTHER PTHR30505 1 157 4.0E-17 T 25-04-2016 SMA_RS01210 b71fbf9e060b4b04d1363992cc8d6d53 157 SUPERFAMILY SSF55804 2 155 1.83E-27 T 25-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 SMA_RS01210 b71fbf9e060b4b04d1363992cc8d6d53 157 Gene3D G3DSA:3.40.930.10 1 155 5.1E-36 T 25-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SMA_RS01210 b71fbf9e060b4b04d1363992cc8d6d53 157 PANTHER PTHR30505:SF2 1 157 4.0E-17 T 25-04-2016 SMA_RS04825 6229098a98999851de79a8c6c6ad61eb 193 TIGRFAM TIGR01744 XPRTase: xanthine phosphoribosyltransferase 1 190 5.6E-80 T 25-04-2016 IPR010079 Xanthine phosphoribosyltransferase GO:0016763|GO:0043101|GO:0046110 KEGG: 00230+2.4.2.22|UniPathway: UPA00602 SMA_RS04825 6229098a98999851de79a8c6c6ad61eb 193 PANTHER PTHR11776:SF1 1 188 5.6E-82 T 25-04-2016 SMA_RS04825 6229098a98999851de79a8c6c6ad61eb 193 Gene3D G3DSA:3.40.50.2020 1 190 7.1E-65 T 25-04-2016 IPR029057 Phosphoribosyltransferase-like SMA_RS04825 6229098a98999851de79a8c6c6ad61eb 193 PANTHER PTHR11776 1 188 5.6E-82 T 25-04-2016 SMA_RS04825 6229098a98999851de79a8c6c6ad61eb 193 Pfam PF00156 Phosphoribosyl transferase domain 34 157 2.0E-9 T 25-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 SMA_RS04825 6229098a98999851de79a8c6c6ad61eb 193 Hamap MF_01184 Xanthine phosphoribosyltransferase [xpt]. 1 189 40.887 T 25-04-2016 IPR010079 Xanthine phosphoribosyltransferase GO:0016763|GO:0043101|GO:0046110 KEGG: 00230+2.4.2.22|UniPathway: UPA00602 SMA_RS04825 6229098a98999851de79a8c6c6ad61eb 193 SUPERFAMILY SSF53271 1 188 2.56E-48 T 25-04-2016 IPR029057 Phosphoribosyltransferase-like SMA_RS01875 cb444cba626dfa58b656ef80624f8e22 160 SUPERFAMILY SSF55021 2 81 1.2E-16 T 25-04-2016 SMA_RS01875 cb444cba626dfa58b656ef80624f8e22 160 Gene3D G3DSA:3.30.70.260 1 79 9.3E-26 T 25-04-2016 SMA_RS01875 cb444cba626dfa58b656ef80624f8e22 160 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 1 77 9.0E-30 T 25-04-2016 SMA_RS01875 cb444cba626dfa58b656ef80624f8e22 160 Pfam PF10369 Small subunit of acetolactate synthase 85 157 8.3E-24 T 25-04-2016 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 SMA_RS01875 cb444cba626dfa58b656ef80624f8e22 160 Pfam PF13710 ACT domain 12 74 2.9E-13 T 25-04-2016 SMA_RS01875 cb444cba626dfa58b656ef80624f8e22 160 Gene3D G3DSA:3.30.70.1150 84 158 2.6E-26 T 25-04-2016 SMA_RS01875 cb444cba626dfa58b656ef80624f8e22 160 PANTHER PTHR30239 1 157 1.3E-69 T 25-04-2016 SMA_RS01875 cb444cba626dfa58b656ef80624f8e22 160 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 1 158 1.5E-52 T 25-04-2016 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 SMA_RS01875 cb444cba626dfa58b656ef80624f8e22 160 SUPERFAMILY SSF55021 80 158 8.85E-22 T 25-04-2016 SMA_RS01740 8c12a9cb21fe82bb6d8b16e9ce17c699 226 SUPERFAMILY SSF53098 69 185 2.07E-10 T 25-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMA_RS01740 8c12a9cb21fe82bb6d8b16e9ce17c699 226 Pfam PF13610 DDE domain 72 203 7.3E-42 T 25-04-2016 IPR032874 DDE domain SMA_RS01740 8c12a9cb21fe82bb6d8b16e9ce17c699 226 PANTHER PTHR35528 1 176 1.0E-39 T 25-04-2016 SMA_RS01740 8c12a9cb21fe82bb6d8b16e9ce17c699 226 PANTHER PTHR35528:SF1 1 176 1.0E-39 T 25-04-2016 SMA_RS01740 8c12a9cb21fe82bb6d8b16e9ce17c699 226 Gene3D G3DSA:3.30.420.10 67 158 6.8E-8 T 25-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMA_RS06670 dd6c9b178565753c410ef9a7d223a61d 211 Pfam PF00665 Integrase core domain 39 150 3.2E-21 T 25-04-2016 IPR001584 Integrase, catalytic core GO:0015074 SMA_RS06670 dd6c9b178565753c410ef9a7d223a61d 211 Gene3D G3DSA:3.30.420.10 34 188 4.4E-27 T 25-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMA_RS06670 dd6c9b178565753c410ef9a7d223a61d 211 SUPERFAMILY SSF53098 32 190 6.07E-31 T 25-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMA_RS06670 dd6c9b178565753c410ef9a7d223a61d 211 PANTHER PTHR32552 1 208 5.9E-24 T 25-04-2016 SMA_RS05615 243df9061b5059a0c93c22f30625178d 417 SUPERFAMILY SSF53244 293 410 5.68E-20 T 25-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SMA_RS05615 243df9061b5059a0c93c22f30625178d 417 Pfam PF08245 Mur ligase middle domain 44 267 3.3E-11 T 25-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SMA_RS05615 243df9061b5059a0c93c22f30625178d 417 PANTHER PTHR11136 1 417 2.9E-118 T 25-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 SMA_RS05615 243df9061b5059a0c93c22f30625178d 417 PANTHER PTHR11136:SF0 1 417 2.9E-118 T 25-04-2016 SMA_RS05615 243df9061b5059a0c93c22f30625178d 417 PIRSF PIRSF001563 1 417 1.1E-125 T 25-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 SMA_RS05615 243df9061b5059a0c93c22f30625178d 417 TIGRFAM TIGR01499 folC: bifunctional protein FolC 22 410 1.3E-121 T 25-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 SMA_RS05615 243df9061b5059a0c93c22f30625178d 417 SUPERFAMILY SSF53623 1 291 3.56E-87 T 25-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SMA_RS05615 243df9061b5059a0c93c22f30625178d 417 Gene3D G3DSA:3.40.1190.10 1 292 5.9E-90 T 25-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SMA_RS05615 243df9061b5059a0c93c22f30625178d 417 Gene3D G3DSA:3.90.190.20 294 412 6.0E-22 T 25-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SMA_RS02520 407584bd8c707033617b87053d278d1d 214 ProSitePatterns PS00622 LuxR-type HTH domain signature. 163 190 - T 25-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SMA_RS02520 407584bd8c707033617b87053d278d1d 214 SUPERFAMILY SSF46894 140 210 3.74E-24 T 25-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SMA_RS02520 407584bd8c707033617b87053d278d1d 214 PANTHER PTHR26402 5 205 4.3E-83 T 25-04-2016 SMA_RS02520 407584bd8c707033617b87053d278d1d 214 Gene3D G3DSA:1.10.10.10 150 208 1.4E-29 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMA_RS02520 407584bd8c707033617b87053d278d1d 214 Pfam PF00072 Response regulator receiver domain 7 119 3.6E-23 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMA_RS02520 407584bd8c707033617b87053d278d1d 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 191 1.5E-14 T 25-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SMA_RS02520 407584bd8c707033617b87053d278d1d 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 163 1.5E-14 T 25-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SMA_RS02520 407584bd8c707033617b87053d278d1d 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 179 1.5E-14 T 25-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SMA_RS02520 407584bd8c707033617b87053d278d1d 214 SMART SM00448 5 118 7.7E-27 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMA_RS02520 407584bd8c707033617b87053d278d1d 214 Pfam PF00196 Bacterial regulatory proteins, luxR family 149 203 6.3E-22 T 25-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SMA_RS02520 407584bd8c707033617b87053d278d1d 214 PANTHER PTHR26402:SF151 5 205 4.3E-83 T 25-04-2016 SMA_RS02520 407584bd8c707033617b87053d278d1d 214 SMART SM00421 146 203 4.6E-27 T 25-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SMA_RS02520 407584bd8c707033617b87053d278d1d 214 Gene3D G3DSA:3.40.50.2300 2 149 2.7E-36 T 25-04-2016 SMA_RS02520 407584bd8c707033617b87053d278d1d 214 SUPERFAMILY SSF52172 4 129 2.99E-31 T 25-04-2016 IPR011006 CheY-like superfamily SMA_RS08140 486cbd1b264d447b7865f012e92cae29 544 PANTHER PTHR30250 4 541 6.4E-148 T 25-04-2016 SMA_RS08140 486cbd1b264d447b7865f012e92cae29 544 PANTHER PTHR30250:SF6 4 541 6.4E-148 T 25-04-2016 SMA_RS08140 486cbd1b264d447b7865f012e92cae29 544 Pfam PF01943 Polysaccharide biosynthesis protein 15 324 7.1E-33 T 25-04-2016 IPR002797 Polysaccharide biosynthesis protein GO:0016020 SMA_RS08140 486cbd1b264d447b7865f012e92cae29 544 PIRSF PIRSF038958 9 541 4.8E-72 T 25-04-2016 IPR024923 Peptidoglycan biosynthesis protein, SpoVB type SMA_RS08140 486cbd1b264d447b7865f012e92cae29 544 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 383 525 3.9E-22 T 25-04-2016 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain SMA_RS00420 61480c64c920015d3606134136db4d21 121 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 10 121 2.3E-45 T 25-04-2016 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS00420 61480c64c920015d3606134136db4d21 121 Gene3D G3DSA:3.30.420.100 27 121 6.7E-40 T 25-04-2016 SMA_RS00420 61480c64c920015d3606134136db4d21 121 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 9 121 1.0E-48 T 25-04-2016 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS00420 61480c64c920015d3606134136db4d21 121 SUPERFAMILY SSF53137 10 119 2.8E-53 T 25-04-2016 SMA_RS00420 61480c64c920015d3606134136db4d21 121 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 9 121 29.406 T 25-04-2016 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS00420 61480c64c920015d3606134136db4d21 121 PANTHER PTHR12899 14 121 2.1E-44 T 25-04-2016 SMA_RS00765 6a9dd3755bfa8fdf9cc4119dbf7b03d0 149 PANTHER PTHR30087:SF1 8 147 9.9E-39 T 25-04-2016 SMA_RS00765 6a9dd3755bfa8fdf9cc4119dbf7b03d0 149 Pfam PF04463 Protein of unknown function (DUF523) 8 140 7.2E-39 T 25-04-2016 IPR007553 Domain of unknown function DUF523 SMA_RS00765 6a9dd3755bfa8fdf9cc4119dbf7b03d0 149 PANTHER PTHR30087 8 147 9.9E-39 T 25-04-2016 SMA_RS03525 62fbb868c58e99448071dc963a2ea3bf 465 PANTHER PTHR12994 1 458 8.2E-66 T 25-04-2016 SMA_RS03525 62fbb868c58e99448071dc963a2ea3bf 465 PANTHER PTHR12994:SF17 1 458 8.2E-66 T 25-04-2016 SMA_RS03525 62fbb868c58e99448071dc963a2ea3bf 465 Pfam PF03577 Peptidase family C69 2 402 8.9E-199 T 25-04-2016 IPR005322 Peptidase C69, dipeptidase A GO:0006508|GO:0016805 SMA_RS07880 b4484752e10a13c77588dcf2f4a0749c 117 Pfam PF11877 Protein of unknown function (DUF3397) 6 114 2.0E-25 T 25-04-2016 IPR024515 Protein of unknown function DUF3397 SMA_RS01420 fb9606551be540b696808b620bd41ebd 251 Pfam PF07179 SseB protein N-terminal domain 138 247 3.7E-4 T 25-04-2016 IPR009839 SseB protein N-terminal domain SMA_RS01110 92e40b8d54f6232189da5a7e31877dca 241 PANTHER PTHR11751:SF381 122 145 5.8E-35 T 25-04-2016 SMA_RS01110 92e40b8d54f6232189da5a7e31877dca 241 PANTHER PTHR11751:SF381 1 69 5.8E-35 T 25-04-2016 SMA_RS01110 92e40b8d54f6232189da5a7e31877dca 241 Pfam PF07702 UTRA domain 96 229 1.8E-36 T 25-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 SMA_RS01110 92e40b8d54f6232189da5a7e31877dca 241 PANTHER PTHR11751 122 145 5.8E-35 T 25-04-2016 SMA_RS01110 92e40b8d54f6232189da5a7e31877dca 241 PANTHER PTHR11751 1 69 5.8E-35 T 25-04-2016 SMA_RS01110 92e40b8d54f6232189da5a7e31877dca 241 SMART SM00866 93 232 1.2E-36 T 25-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 SMA_RS01110 92e40b8d54f6232189da5a7e31877dca 241 SMART SM00345 7 66 1.0E-19 T 25-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SMA_RS01110 92e40b8d54f6232189da5a7e31877dca 241 Pfam PF00392 Bacterial regulatory proteins, gntR family 3 66 2.3E-20 T 25-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SMA_RS01110 92e40b8d54f6232189da5a7e31877dca 241 SUPERFAMILY SSF46785 1 70 1.8E-19 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMA_RS01110 92e40b8d54f6232189da5a7e31877dca 241 SUPERFAMILY SSF64288 79 233 1.15E-44 T 25-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain SMA_RS01110 92e40b8d54f6232189da5a7e31877dca 241 Gene3D G3DSA:3.40.1410.10 63 230 2.0E-49 T 25-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain SMA_RS01110 92e40b8d54f6232189da5a7e31877dca 241 Gene3D G3DSA:1.10.10.10 2 62 1.1E-23 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMA_RS01110 92e40b8d54f6232189da5a7e31877dca 241 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 40 56 4.7E-9 T 25-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SMA_RS01110 92e40b8d54f6232189da5a7e31877dca 241 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 26 40 4.7E-9 T 25-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SMA_RS01530 7191f0de748a0ecfb72b2fa357d6de68 204 Pfam PF03596 Cadmium resistance transporter 12 202 1.1E-89 T 25-04-2016 IPR004676 Cadmium resistance transporter SMA_RS01530 7191f0de748a0ecfb72b2fa357d6de68 204 TIGRFAM TIGR00779 cad: cadmium resistance transporter family protein 13 201 8.0E-64 T 25-04-2016 IPR004676 Cadmium resistance transporter SMA_RS04655 47612ad889425b4ed58c1968da8520a5 260 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 150 247 2.1E-14 T 25-04-2016 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 SMA_RS04655 47612ad889425b4ed58c1968da8520a5 260 PANTHER PTHR30524 152 254 8.3E-30 T 25-04-2016 SMA_RS04655 47612ad889425b4ed58c1968da8520a5 260 SUPERFAMILY SSF48179 144 251 1.02E-16 T 25-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 SMA_RS04655 47612ad889425b4ed58c1968da8520a5 260 PANTHER PTHR30524:SF0 152 254 8.3E-30 T 25-04-2016 SMA_RS04655 47612ad889425b4ed58c1968da8520a5 260 Gene3D G3DSA:1.10.1040.10 149 250 1.4E-14 T 25-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 SMA_RS04275 32bc03dd2bd2e23db3188994819c5f53 468 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 82 91 - T 25-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 SMA_RS04275 32bc03dd2bd2e23db3188994819c5f53 468 Gene3D G3DSA:3.30.70.360 206 285 8.8E-28 T 25-04-2016 IPR011650 Peptidase M20, dimerisation domain SMA_RS04275 32bc03dd2bd2e23db3188994819c5f53 468 Pfam PF07687 Peptidase dimerisation domain 260 368 1.7E-4 T 25-04-2016 IPR011650 Peptidase M20, dimerisation domain SMA_RS04275 32bc03dd2bd2e23db3188994819c5f53 468 PANTHER PTHR11014 1 192 8.5E-63 T 25-04-2016 SMA_RS04275 32bc03dd2bd2e23db3188994819c5f53 468 PANTHER PTHR11014 260 468 8.5E-63 T 25-04-2016 SMA_RS04275 32bc03dd2bd2e23db3188994819c5f53 468 TIGRFAM TIGR01886 dipeptidase: dipeptidase PepV 2 468 1.0E-219 T 25-04-2016 IPR011291 Peptidase M20A, peptidase V KEGG: 00480+3.4.13.- SMA_RS04275 32bc03dd2bd2e23db3188994819c5f53 468 SUPERFAMILY SSF53187 2 188 1.89E-68 T 25-04-2016 SMA_RS04275 32bc03dd2bd2e23db3188994819c5f53 468 SUPERFAMILY SSF53187 385 467 1.89E-68 T 25-04-2016 SMA_RS04275 32bc03dd2bd2e23db3188994819c5f53 468 Pfam PF01546 Peptidase family M20/M25/M40 86 464 6.3E-32 T 25-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 SMA_RS04275 32bc03dd2bd2e23db3188994819c5f53 468 Gene3D G3DSA:3.40.630.10 4 188 5.8E-70 T 25-04-2016 SMA_RS04275 32bc03dd2bd2e23db3188994819c5f53 468 Gene3D G3DSA:3.40.630.10 384 467 5.8E-70 T 25-04-2016 SMA_RS04275 32bc03dd2bd2e23db3188994819c5f53 468 TIGRFAM TIGR01887 dipeptidaselike: putative dipeptidase 13 463 3.2E-174 T 25-04-2016 IPR010964 Peptidase M20A, peptidase V-related GO:0008270|GO:0016805 KEGG: 00480+3.4.13.- SMA_RS04275 32bc03dd2bd2e23db3188994819c5f53 468 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 116 155 - T 25-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 SMA_RS04275 32bc03dd2bd2e23db3188994819c5f53 468 SUPERFAMILY SSF55031 188 383 1.5E-51 T 25-04-2016 IPR011650 Peptidase M20, dimerisation domain SMA_RS04275 32bc03dd2bd2e23db3188994819c5f53 468 Gene3D G3DSA:3.30.70.360 286 382 1.0E-39 T 25-04-2016 IPR011650 Peptidase M20, dimerisation domain SMA_RS05170 185365bfcb69f8c948eff81bce5a254c 527 SUPERFAMILY SSF56024 334 511 2.18E-35 T 25-04-2016 SMA_RS05170 185365bfcb69f8c948eff81bce5a254c 527 SMART SM00155 263 290 3.8E-5 T 25-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 SMA_RS05170 185365bfcb69f8c948eff81bce5a254c 527 SMART SM00155 440 467 7.8E-5 T 25-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 SMA_RS05170 185365bfcb69f8c948eff81bce5a254c 527 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 69 527 7.3E-91 T 25-04-2016 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 SMA_RS05170 185365bfcb69f8c948eff81bce5a254c 527 SUPERFAMILY SSF56024 145 356 1.16E-41 T 25-04-2016 SMA_RS05170 185365bfcb69f8c948eff81bce5a254c 527 PANTHER PTHR21248 64 527 9.2E-88 T 25-04-2016 SMA_RS05170 185365bfcb69f8c948eff81bce5a254c 527 Gene3D G3DSA:3.30.870.10 364 516 2.3E-31 T 25-04-2016 SMA_RS05170 185365bfcb69f8c948eff81bce5a254c 527 Gene3D G3DSA:3.30.870.10 158 361 2.8E-46 T 25-04-2016 SMA_RS05170 185365bfcb69f8c948eff81bce5a254c 527 PANTHER PTHR21248:SF5 64 527 9.2E-88 T 25-04-2016 SMA_RS05170 185365bfcb69f8c948eff81bce5a254c 527 Pfam PF13091 PLD-like domain 181 322 1.4E-10 T 25-04-2016 IPR025202 Phospholipase D-like domain SMA_RS05170 185365bfcb69f8c948eff81bce5a254c 527 Pfam PF13091 PLD-like domain 368 479 2.0E-20 T 25-04-2016 IPR025202 Phospholipase D-like domain SMA_RS05115 a2f6accc186c84743876b02cb1123a0f 259 PANTHER PTHR10954:SF7 2 258 3.0E-96 T 25-04-2016 SMA_RS05115 a2f6accc186c84743876b02cb1123a0f 259 Pfam PF01351 Ribonuclease HII 73 250 4.1E-35 T 25-04-2016 IPR024567 Ribonuclease HII/HIII domain SMA_RS05115 a2f6accc186c84743876b02cb1123a0f 259 Gene3D G3DSA:3.30.420.10 71 212 2.2E-45 T 25-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMA_RS05115 a2f6accc186c84743876b02cb1123a0f 259 PANTHER PTHR10954 2 258 3.0E-96 T 25-04-2016 IPR001352 Ribonuclease HII/HIII GO:0003723|GO:0004523 SMA_RS05115 a2f6accc186c84743876b02cb1123a0f 259 SUPERFAMILY SSF53098 60 257 1.67E-66 T 25-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMA_RS05115 a2f6accc186c84743876b02cb1123a0f 259 Hamap MF_00052_B Ribonuclease HII [rnhB]. 71 252 33.92 T 25-04-2016 IPR022898 Ribonuclease HII GO:0004523 SMA_RS01510 a75b3695a3986e9b3fcedd7cc230590b 148 Pfam PF03965 Penicillinase repressor 10 123 1.5E-36 T 25-04-2016 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 SMA_RS01510 a75b3695a3986e9b3fcedd7cc230590b 148 SUPERFAMILY SSF46785 10 123 1.23E-26 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMA_RS01510 a75b3695a3986e9b3fcedd7cc230590b 148 Gene3D G3DSA:1.10.10.10 11 73 2.6E-28 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMA_RS01510 a75b3695a3986e9b3fcedd7cc230590b 148 TIGRFAM TIGR02698 CopY_TcrY: copper transport repressor, CopY/TcrY family 10 138 5.9E-58 T 25-04-2016 IPR014071 Copper transport repressor CopY/TcrY SMA_RS01510 a75b3695a3986e9b3fcedd7cc230590b 148 PIRSF PIRSF019455 5 135 4.9E-39 T 25-04-2016 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 SMA_RS01510 a75b3695a3986e9b3fcedd7cc230590b 148 PANTHER PTHR34134:SF1 10 134 1.6E-27 T 25-04-2016 SMA_RS01510 a75b3695a3986e9b3fcedd7cc230590b 148 PANTHER PTHR34134 10 134 1.6E-27 T 25-04-2016 SMA_RS00220 2aa040c397b40a2662f8a768f147816c 391 PANTHER PTHR11751:SF417 14 387 1.2E-165 T 25-04-2016 SMA_RS00220 2aa040c397b40a2662f8a768f147816c 391 Pfam PF00155 Aminotransferase class I and II 32 382 4.0E-62 T 25-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 SMA_RS00220 2aa040c397b40a2662f8a768f147816c 391 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 93 113 3.91E-14 T 25-04-2016 SMA_RS00220 2aa040c397b40a2662f8a768f147816c 391 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 115 136 3.91E-14 T 25-04-2016 SMA_RS00220 2aa040c397b40a2662f8a768f147816c 391 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 200 223 3.91E-14 T 25-04-2016 SMA_RS00220 2aa040c397b40a2662f8a768f147816c 391 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 164 188 3.91E-14 T 25-04-2016 SMA_RS00220 2aa040c397b40a2662f8a768f147816c 391 Gene3D G3DSA:3.40.640.10 44 255 1.1E-68 T 25-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SMA_RS00220 2aa040c397b40a2662f8a768f147816c 391 SUPERFAMILY SSF53383 6 388 1.73E-108 T 25-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SMA_RS00220 2aa040c397b40a2662f8a768f147816c 391 Gene3D G3DSA:3.90.1150.10 256 388 2.1E-39 T 25-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SMA_RS00220 2aa040c397b40a2662f8a768f147816c 391 PANTHER PTHR11751 14 387 1.2E-165 T 25-04-2016 SMA_RS00220 2aa040c397b40a2662f8a768f147816c 391 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 234 247 - T 25-04-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Reactome: REACT_13 SMA_RS07365 47222215cdd3e1d7262b90d22b6dca1a 285 SUPERFAMILY SSF56300 141 232 7.76E-20 T 25-04-2016 IPR029052 Metallo-dependent phosphatase-like SMA_RS07365 47222215cdd3e1d7262b90d22b6dca1a 285 SUPERFAMILY SSF56300 2 109 7.76E-20 T 25-04-2016 IPR029052 Metallo-dependent phosphatase-like SMA_RS07365 47222215cdd3e1d7262b90d22b6dca1a 285 Pfam PF00149 Calcineurin-like phosphoesterase 3 207 8.0E-9 T 25-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 SMA_RS07365 47222215cdd3e1d7262b90d22b6dca1a 285 Gene3D G3DSA:3.60.21.10 1 226 1.2E-14 T 25-04-2016 IPR029052 Metallo-dependent phosphatase-like SMA_RS07365 47222215cdd3e1d7262b90d22b6dca1a 285 TIGRFAM TIGR03729 acc_ester: putative phosphoesterase 3 226 5.4E-74 T 25-04-2016 IPR022302 Phosphoesterase, putative SMA_RS03610 b341008d11ab5a771eb8c680309f5df9 94 Pfam PF04650 YSIRK type signal peptide 2 26 4.8E-11 T 25-04-2016 IPR005877 YSIRK Gram-positive signal peptide GO:0016020 SMA_RS03610 b341008d11ab5a771eb8c680309f5df9 94 TIGRFAM TIGR01168 YSIRK_signal: gram-positive signal peptide, YSIRK family 2 35 9.9E-13 T 25-04-2016 IPR005877 YSIRK Gram-positive signal peptide GO:0016020 SMA_RS04470 ecdbf1f765feed5cb7d487f24eef0c4f 107 Pfam PF00719 Inorganic pyrophosphatase 20 100 3.7E-6 T 25-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 SMA_RS04470 ecdbf1f765feed5cb7d487f24eef0c4f 107 Gene3D G3DSA:3.90.80.10 18 102 6.9E-14 T 25-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 SMA_RS04470 ecdbf1f765feed5cb7d487f24eef0c4f 107 SUPERFAMILY SSF50324 4 101 3.92E-17 T 25-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 SMA_RS01720 e46e7a584bd1cc8b2d58503a533b7f18 259 ProSitePatterns PS00552 MerR-type HTH domain signature. 10 32 - T 25-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SMA_RS01720 e46e7a584bd1cc8b2d58503a533b7f18 259 Gene3D G3DSA:1.10.1660.10 7 118 9.2E-19 T 25-04-2016 SMA_RS01720 e46e7a584bd1cc8b2d58503a533b7f18 259 Pfam PF00376 MerR family regulatory protein 8 46 2.1E-10 T 25-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SMA_RS01720 e46e7a584bd1cc8b2d58503a533b7f18 259 PANTHER PTHR30204 1 116 5.1E-17 T 25-04-2016 SMA_RS01720 e46e7a584bd1cc8b2d58503a533b7f18 259 SUPERFAMILY SSF46955 5 113 1.56E-20 T 25-04-2016 IPR009061 Putative DNA-binding domain SMA_RS01720 e46e7a584bd1cc8b2d58503a533b7f18 259 SMART SM00422 7 77 1.3E-10 T 25-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SMA_RS05005 4165cc995beb62f64d7603230d8595c3 232 SMART SM00345 8 67 3.0E-21 T 25-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SMA_RS05005 4165cc995beb62f64d7603230d8595c3 232 SUPERFAMILY SSF46785 3 71 9.11E-23 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMA_RS05005 4165cc995beb62f64d7603230d8595c3 232 Pfam PF00392 Bacterial regulatory proteins, gntR family 5 67 3.2E-21 T 25-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SMA_RS05005 4165cc995beb62f64d7603230d8595c3 232 Gene3D G3DSA:3.40.1410.10 65 231 3.1E-51 T 25-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain SMA_RS05005 4165cc995beb62f64d7603230d8595c3 232 SUPERFAMILY SSF64288 55 230 3.61E-47 T 25-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain SMA_RS05005 4165cc995beb62f64d7603230d8595c3 232 Gene3D G3DSA:1.10.10.10 3 64 5.5E-27 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMA_RS05005 4165cc995beb62f64d7603230d8595c3 232 PANTHER PTHR11751:SF333 121 140 8.0E-28 T 25-04-2016 SMA_RS05005 4165cc995beb62f64d7603230d8595c3 232 PANTHER PTHR11751:SF333 1 74 8.0E-28 T 25-04-2016 SMA_RS05005 4165cc995beb62f64d7603230d8595c3 232 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 41 57 4.2E-10 T 25-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SMA_RS05005 4165cc995beb62f64d7603230d8595c3 232 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 27 41 4.2E-10 T 25-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SMA_RS05005 4165cc995beb62f64d7603230d8595c3 232 SMART SM00866 88 226 3.2E-37 T 25-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 SMA_RS05005 4165cc995beb62f64d7603230d8595c3 232 Pfam PF07702 UTRA domain 88 226 2.7E-37 T 25-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 SMA_RS05005 4165cc995beb62f64d7603230d8595c3 232 PANTHER PTHR11751 121 140 8.0E-28 T 25-04-2016 SMA_RS05005 4165cc995beb62f64d7603230d8595c3 232 PANTHER PTHR11751 1 74 8.0E-28 T 25-04-2016 SMA_RS05750 2c6616370745e99872a492d0ae6559fc 174 Pfam PF06970 Replication initiator protein A (RepA) N-terminus 14 86 1.8E-29 T 25-04-2016 IPR010724 Replication initiator A, N-terminal SMA_RS01215 995d75af83163e8d08626ee5056a357d 100 Gene3D G3DSA:3.40.50.270 1 80 5.3E-12 T 25-04-2016 SMA_RS01215 995d75af83163e8d08626ee5056a357d 100 SUPERFAMILY SSF52794 1 77 4.97E-12 T 25-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 SMA_RS01215 995d75af83163e8d08626ee5056a357d 100 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 3 95 1.4E-8 T 25-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 SMA_RS05785 7c1aa67f8626970e12b081ddde58469b 702 Gene3D G3DSA:1.10.8.60 263 343 4.0E-25 T 25-04-2016 SMA_RS05785 7c1aa67f8626970e12b081ddde58469b 702 SMART SM01086 612 699 3.5E-31 T 25-04-2016 IPR019489 Clp ATPase, C-terminal SMA_RS05785 7c1aa67f8626970e12b081ddde58469b 702 SUPERFAMILY SSF52540 395 681 1.48E-72 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS05785 7c1aa67f8626970e12b081ddde58469b 702 SMART SM00382 446 613 2.5E-11 T 25-04-2016 IPR003593 AAA+ ATPase domain SMA_RS05785 7c1aa67f8626970e12b081ddde58469b 702 SMART SM00382 115 262 4.3E-10 T 25-04-2016 IPR003593 AAA+ ATPase domain SMA_RS05785 7c1aa67f8626970e12b081ddde58469b 702 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 450 468 5.3E-28 T 25-04-2016 IPR001270 ClpA/B family GO:0005524 SMA_RS05785 7c1aa67f8626970e12b081ddde58469b 702 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 525 543 5.3E-28 T 25-04-2016 IPR001270 ClpA/B family GO:0005524 SMA_RS05785 7c1aa67f8626970e12b081ddde58469b 702 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 558 572 5.3E-28 T 25-04-2016 IPR001270 ClpA/B family GO:0005524 SMA_RS05785 7c1aa67f8626970e12b081ddde58469b 702 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 495 513 5.3E-28 T 25-04-2016 IPR001270 ClpA/B family GO:0005524 SMA_RS05785 7c1aa67f8626970e12b081ddde58469b 702 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 612 682 1.2E-22 T 25-04-2016 IPR019489 Clp ATPase, C-terminal SMA_RS05785 7c1aa67f8626970e12b081ddde58469b 702 Pfam PF07724 AAA domain (Cdc48 subfamily) 445 604 5.8E-43 T 25-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 SMA_RS05785 7c1aa67f8626970e12b081ddde58469b 702 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 480 498 - T 25-04-2016 IPR028299 ClpA/B, conserved site 2 SMA_RS05785 7c1aa67f8626970e12b081ddde58469b 702 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 120 252 3.4E-14 T 25-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 SMA_RS05785 7c1aa67f8626970e12b081ddde58469b 702 Gene3D G3DSA:3.40.50.300 79 261 8.9E-42 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS05785 7c1aa67f8626970e12b081ddde58469b 702 Gene3D G3DSA:3.40.50.300 403 623 7.7E-55 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS05785 7c1aa67f8626970e12b081ddde58469b 702 Gene3D G3DSA:1.10.8.60 624 699 2.5E-26 T 25-04-2016 SMA_RS05785 7c1aa67f8626970e12b081ddde58469b 702 SUPERFAMILY SSF52540 78 349 8.53E-61 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS05785 7c1aa67f8626970e12b081ddde58469b 702 PANTHER PTHR11638 77 699 0.0 T 25-04-2016 SMA_RS05785 7c1aa67f8626970e12b081ddde58469b 702 PANTHER PTHR11638:SF101 77 699 0.0 T 25-04-2016 SMA_RS02880 8a35f01d44cc5eb0df66fb2f4b969749 292 PANTHER PTHR24220:SF165 3 221 1.2E-67 T 25-04-2016 SMA_RS02880 8a35f01d44cc5eb0df66fb2f4b969749 292 SMART SM00382 26 205 5.5E-12 T 25-04-2016 IPR003593 AAA+ ATPase domain SMA_RS02880 8a35f01d44cc5eb0df66fb2f4b969749 292 ProSitePatterns PS00211 ABC transporters family signature. 127 141 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SMA_RS02880 8a35f01d44cc5eb0df66fb2f4b969749 292 PANTHER PTHR24220 3 221 1.2E-67 T 25-04-2016 SMA_RS02880 8a35f01d44cc5eb0df66fb2f4b969749 292 SUPERFAMILY SSF52540 2 217 2.91E-52 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS02880 8a35f01d44cc5eb0df66fb2f4b969749 292 Gene3D G3DSA:3.40.50.300 1 221 2.6E-57 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS02880 8a35f01d44cc5eb0df66fb2f4b969749 292 Pfam PF00005 ABC transporter 17 155 5.1E-27 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMA_RS01205 b1b178c5d23cd461d89adbc7600c5492 325 TIGRFAM TIGR01232 lacD: tagatose 1,6-diphosphate aldolase 3 325 9.9E-183 T 25-04-2016 IPR005927 Tagatose 1,6-diphosphate aldolase GO:0009024|GO:0019512 KEGG: 00052+4.1.2.40|MetaCyc: PWY-7077|MetaCyc: PWY-7395|UniPathway: UPA00704 SMA_RS01205 b1b178c5d23cd461d89adbc7600c5492 325 Hamap MF_00734 Tagatose 1,6-diphosphate aldolase [lacD]. 1 325 208.733 T 25-04-2016 IPR005927 Tagatose 1,6-diphosphate aldolase GO:0009024|GO:0019512 KEGG: 00052+4.1.2.40|MetaCyc: PWY-7077|MetaCyc: PWY-7395|UniPathway: UPA00704 SMA_RS01205 b1b178c5d23cd461d89adbc7600c5492 325 Gene3D G3DSA:3.20.20.70 5 325 4.8E-132 T 25-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SMA_RS01205 b1b178c5d23cd461d89adbc7600c5492 325 Pfam PF01791 DeoC/LacD family aldolase 20 281 1.6E-80 T 25-04-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 SMA_RS01205 b1b178c5d23cd461d89adbc7600c5492 325 SUPERFAMILY SSF51569 11 320 3.33E-69 T 25-04-2016 SMA_RS01205 b1b178c5d23cd461d89adbc7600c5492 325 PANTHER PTHR39340 1 325 1.1E-128 T 25-04-2016 SMA_RS01205 b1b178c5d23cd461d89adbc7600c5492 325 PANTHER PTHR39340:SF1 1 325 1.1E-128 T 25-04-2016 SMA_RS01205 b1b178c5d23cd461d89adbc7600c5492 325 SMART SM01133 20 282 1.6E-30 T 25-04-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 SMA_RS03535 ddec11ec4a369c9956f304fa7a7b85f7 361 Gene3D G3DSA:1.20.1250.20 10 181 4.5E-12 T 25-04-2016 SMA_RS03535 ddec11ec4a369c9956f304fa7a7b85f7 361 SUPERFAMILY SSF103473 11 357 1.57E-18 T 25-04-2016 IPR020846 Major facilitator superfamily domain SMA_RS10025 52e2187380691a139573ce18e03a1966 424 Pfam PF05816 Toxic anion resistance protein (TelA) 65 388 1.3E-21 T 25-04-2016 IPR008863 Toxic anion resistance SMA_RS05825 f659cd4f0174f37e8803e01e94b6911e 164 Gene3D G3DSA:3.40.430.10 4 164 9.8E-53 T 25-04-2016 IPR024072 Dihydrofolate reductase-like domain SMA_RS05825 f659cd4f0174f37e8803e01e94b6911e 164 ProSitePatterns PS00075 Dihydrofolate reductase (DHFR) domain signature. 16 38 - T 25-04-2016 IPR017925 Dihydrofolate reductase conserved site GO:0004146|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 SMA_RS05825 f659cd4f0174f37e8803e01e94b6911e 164 Pfam PF00186 Dihydrofolate reductase 4 163 1.1E-54 T 25-04-2016 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0006545|GO:0009165|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 SMA_RS05825 f659cd4f0174f37e8803e01e94b6911e 164 PANTHER PTHR22778 1 164 7.2E-33 T 25-04-2016 SMA_RS05825 f659cd4f0174f37e8803e01e94b6911e 164 PIRSF PIRSF000194 1 164 2.9E-52 T 25-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 SMA_RS05825 f659cd4f0174f37e8803e01e94b6911e 164 SUPERFAMILY SSF53597 1 164 1.18E-53 T 25-04-2016 IPR024072 Dihydrofolate reductase-like domain SMA_RS05825 f659cd4f0174f37e8803e01e94b6911e 164 PRINTS PR00070 Dihydrofolate reductase signature 30 38 1.2E-12 T 25-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 SMA_RS05825 f659cd4f0174f37e8803e01e94b6911e 164 PRINTS PR00070 Dihydrofolate reductase signature 96 110 1.2E-12 T 25-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 SMA_RS05825 f659cd4f0174f37e8803e01e94b6911e 164 PRINTS PR00070 Dihydrofolate reductase signature 16 26 1.2E-12 T 25-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 SMA_RS05825 f659cd4f0174f37e8803e01e94b6911e 164 PRINTS PR00070 Dihydrofolate reductase signature 43 54 1.2E-12 T 25-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 SMA_RS05825 f659cd4f0174f37e8803e01e94b6911e 164 PANTHER PTHR22778:SF16 1 164 7.2E-33 T 25-04-2016 SMA_RS03370 a4ecf8155804914e228a512b47c617ce 343 Hamap MF_01145 Foldase protein PrsA [prsA]. 21 312 18.164 T 25-04-2016 IPR023059 Foldase protein PrsA GO:0003755 SMA_RS03370 a4ecf8155804914e228a512b47c617ce 343 Pfam PF13145 PPIC-type PPIASE domain 154 266 4.3E-11 T 25-04-2016 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 SMA_RS03370 a4ecf8155804914e228a512b47c617ce 343 SUPERFAMILY SSF54534 165 255 2.98E-6 T 25-04-2016 SMA_RS03370 a4ecf8155804914e228a512b47c617ce 343 SUPERFAMILY SSF109998 47 190 2.08E-18 T 25-04-2016 IPR027304 Trigger factor/SurA domain SMA_RS03370 a4ecf8155804914e228a512b47c617ce 343 Gene3D G3DSA:3.10.50.40 172 276 1.5E-8 T 25-04-2016 SMA_RS10655 ffef7338f6ebac54bb2aa2e9a926c9de 837 Pfam PF13575 Domain of unknown function (DUF4135) 103 460 1.3E-57 T 25-04-2016 IPR025410 Domain of unknown function DUF4135 SMA_RS10655 ffef7338f6ebac54bb2aa2e9a926c9de 837 SUPERFAMILY SSF158745 536 830 4.58E-45 T 25-04-2016 SMA_RS10655 ffef7338f6ebac54bb2aa2e9a926c9de 837 Pfam PF05147 Lanthionine synthetase C-like protein 618 831 3.8E-27 T 25-04-2016 IPR007822 Lanthionine synthetase C-like SMA_RS10655 ffef7338f6ebac54bb2aa2e9a926c9de 837 SMART SM01260 549 834 1.3E-4 T 25-04-2016 IPR007822 Lanthionine synthetase C-like SMA_RS07705 2a59da323cfb01f031cab00e2641096a 292 Pfam PF11311 Protein of unknown function (DUF3114) 3 265 1.1E-87 T 25-04-2016 IPR021462 Protein of unknown function DUF3114 SMA_RS04060 bcdfede3409213fb00594bc8553466e7 639 ProSitePatterns PS00211 ABC transporters family signature. 444 458 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SMA_RS04060 bcdfede3409213fb00594bc8553466e7 639 SUPERFAMILY SSF52540 311 534 2.6E-41 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS04060 bcdfede3409213fb00594bc8553466e7 639 SMART SM00382 28 243 1.5E-8 T 25-04-2016 IPR003593 AAA+ ATPase domain SMA_RS04060 bcdfede3409213fb00594bc8553466e7 639 SMART SM00382 351 518 3.3E-11 T 25-04-2016 IPR003593 AAA+ ATPase domain SMA_RS04060 bcdfede3409213fb00594bc8553466e7 639 SUPERFAMILY SSF52540 12 234 1.54E-43 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS04060 bcdfede3409213fb00594bc8553466e7 639 Gene3D G3DSA:3.40.50.300 139 285 8.8E-47 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS04060 bcdfede3409213fb00594bc8553466e7 639 Gene3D G3DSA:3.40.50.300 328 566 3.8E-40 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS04060 bcdfede3409213fb00594bc8553466e7 639 Gene3D G3DSA:3.40.50.300 9 102 8.8E-47 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS04060 bcdfede3409213fb00594bc8553466e7 639 PANTHER PTHR19211:SF64 1 582 0.0 T 25-04-2016 SMA_RS04060 bcdfede3409213fb00594bc8553466e7 639 PANTHER PTHR19211 1 582 0.0 T 25-04-2016 SMA_RS04060 bcdfede3409213fb00594bc8553466e7 639 Pfam PF12848 ABC transporter 231 313 1.2E-24 T 25-04-2016 IPR032781 ABC-transporter extension domain SMA_RS04060 bcdfede3409213fb00594bc8553466e7 639 Pfam PF00005 ABC transporter 344 472 2.2E-20 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMA_RS04060 bcdfede3409213fb00594bc8553466e7 639 Pfam PF00005 ABC transporter 20 191 1.9E-28 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMA_RS10485 7b42216355a3d1c51310bf22fa4a00b1 493 PANTHER PTHR11911:SF6 1 287 3.8E-245 T 25-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 SMA_RS10485 7b42216355a3d1c51310bf22fa4a00b1 493 PANTHER PTHR11911:SF6 305 491 3.8E-245 T 25-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 SMA_RS10485 7b42216355a3d1c51310bf22fa4a00b1 493 SMART SM01240 11 479 0.0 T 25-04-2016 SMA_RS10485 7b42216355a3d1c51310bf22fa4a00b1 493 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 12 479 4.8E-159 T 25-04-2016 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 Reactome: REACT_1698 SMA_RS10485 7b42216355a3d1c51310bf22fa4a00b1 493 Pfam PF00571 CBS domain 160 206 3.5E-7 T 25-04-2016 IPR000644 CBS domain SMA_RS10485 7b42216355a3d1c51310bf22fa4a00b1 493 Pfam PF00571 CBS domain 100 146 3.0E-7 T 25-04-2016 IPR000644 CBS domain SMA_RS10485 7b42216355a3d1c51310bf22fa4a00b1 493 Gene3D G3DSA:3.20.20.70 9 491 6.0E-201 T 25-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SMA_RS10485 7b42216355a3d1c51310bf22fa4a00b1 493 PANTHER PTHR11911 1 287 3.8E-245 T 25-04-2016 SMA_RS10485 7b42216355a3d1c51310bf22fa4a00b1 493 PANTHER PTHR11911 305 491 3.8E-245 T 25-04-2016 SMA_RS10485 7b42216355a3d1c51310bf22fa4a00b1 493 PIRSF PIRSF000130 3 493 2.3E-208 T 25-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 SMA_RS10485 7b42216355a3d1c51310bf22fa4a00b1 493 SUPERFAMILY SSF54631 99 210 4.42E-29 T 25-04-2016 SMA_RS10485 7b42216355a3d1c51310bf22fa4a00b1 493 SMART SM00116 100 150 4.4E-7 T 25-04-2016 IPR000644 CBS domain SMA_RS10485 7b42216355a3d1c51310bf22fa4a00b1 493 SMART SM00116 163 211 2.3E-9 T 25-04-2016 IPR000644 CBS domain SMA_RS10485 7b42216355a3d1c51310bf22fa4a00b1 493 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 12 461 2.4E-193 T 25-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 SMA_RS10485 7b42216355a3d1c51310bf22fa4a00b1 493 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 300 312 - T 25-04-2016 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 Reactome: REACT_1698 SMA_RS10485 7b42216355a3d1c51310bf22fa4a00b1 493 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 12 492 83.453 T 25-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 SMA_RS10485 7b42216355a3d1c51310bf22fa4a00b1 493 SUPERFAMILY SSF51412 7 94 1.27E-120 T 25-04-2016 SMA_RS10485 7b42216355a3d1c51310bf22fa4a00b1 493 SUPERFAMILY SSF51412 222 483 1.27E-120 T 25-04-2016 SMA_RS08650 b31d5c479a343073f9b5964b00fd72d4 462 SUPERFAMILY SSF103473 5 199 2.75E-59 T 25-04-2016 IPR020846 Major facilitator superfamily domain SMA_RS08650 b31d5c479a343073f9b5964b00fd72d4 462 SUPERFAMILY SSF103473 247 457 2.75E-59 T 25-04-2016 IPR020846 Major facilitator superfamily domain SMA_RS08650 b31d5c479a343073f9b5964b00fd72d4 462 PRINTS PR01036 Tetracycline resistance protein TetB signature 107 127 3.0E-10 T 25-04-2016 SMA_RS08650 b31d5c479a343073f9b5964b00fd72d4 462 PRINTS PR01036 Tetracycline resistance protein TetB signature 16 40 3.0E-10 T 25-04-2016 SMA_RS08650 b31d5c479a343073f9b5964b00fd72d4 462 PRINTS PR01036 Tetracycline resistance protein TetB signature 301 325 3.0E-10 T 25-04-2016 SMA_RS08650 b31d5c479a343073f9b5964b00fd72d4 462 PRINTS PR01036 Tetracycline resistance protein TetB signature 137 161 3.0E-10 T 25-04-2016 SMA_RS08650 b31d5c479a343073f9b5964b00fd72d4 462 Pfam PF07690 Major Facilitator Superfamily 20 408 3.4E-46 T 25-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SMA_RS08650 b31d5c479a343073f9b5964b00fd72d4 462 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 15 430 4.5E-69 T 25-04-2016 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 SMA_RS08650 b31d5c479a343073f9b5964b00fd72d4 462 PANTHER PTHR23501 1 458 4.3E-81 T 25-04-2016 SMA_RS08650 b31d5c479a343073f9b5964b00fd72d4 462 Gene3D G3DSA:1.20.1250.20 265 457 3.0E-20 T 25-04-2016 SMA_RS08650 b31d5c479a343073f9b5964b00fd72d4 462 Gene3D G3DSA:1.20.1250.20 12 196 1.5E-23 T 25-04-2016 SMA_RS08105 0dc12d25bbdd61b0996934118cfe3158 144 SUPERFAMILY SSF158622 7 127 8.11E-21 T 25-04-2016 IPR023378 YheA/YmcA-like domain SMA_RS08105 0dc12d25bbdd61b0996934118cfe3158 144 Gene3D G3DSA:1.20.1500.10 9 126 4.9E-16 T 25-04-2016 IPR023378 YheA/YmcA-like domain SMA_RS08105 0dc12d25bbdd61b0996934118cfe3158 144 PANTHER PTHR38448:SF2 3 127 1.2E-15 T 25-04-2016 SMA_RS08105 0dc12d25bbdd61b0996934118cfe3158 144 PANTHER PTHR38448 3 127 1.2E-15 T 25-04-2016 SMA_RS08105 0dc12d25bbdd61b0996934118cfe3158 144 Pfam PF06133 Control of competence regulator ComK, YlbF/YmcA 11 117 8.5E-14 T 25-04-2016 IPR010368 Control of competence regulator ComK, YlbF/YmcA SMA_RS02615 766ff30c88fc54b8718ccfe99a7e95ca 103 Gene3D G3DSA:3.10.450.150 1 102 2.7E-43 T 25-04-2016 SMA_RS02615 766ff30c88fc54b8718ccfe99a7e95ca 103 Pfam PF06124 Staphylococcal protein of unknown function (DUF960) 8 101 1.1E-28 T 25-04-2016 IPR009303 Protein of unknown function DUF960 SMA_RS03500 11a3fcc4b38d80a698c87f23d8b5788b 254 PANTHER PTHR41386:SF1 5 206 4.8E-34 T 25-04-2016 SMA_RS03500 11a3fcc4b38d80a698c87f23d8b5788b 254 Pfam PF06210 Protein of unknown function (DUF1003) 115 212 3.0E-35 T 25-04-2016 IPR010406 Protein of unknown function DUF1003 SMA_RS03500 11a3fcc4b38d80a698c87f23d8b5788b 254 PANTHER PTHR41386 5 206 4.8E-34 T 25-04-2016 SMA_RS06710 c1def5ca46a1bd9451c67f8749b1b19c 108 Gene3D G3DSA:3.30.360.10 2 92 6.5E-11 T 25-04-2016 SMA_RS09415 8da782251eb734aadb3dc5c9309275a7 540 PRINTS PR00072 Malic enzyme signature 230 248 4.3E-62 T 25-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 SMA_RS09415 8da782251eb734aadb3dc5c9309275a7 540 PRINTS PR00072 Malic enzyme signature 286 302 4.3E-62 T 25-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 SMA_RS09415 8da782251eb734aadb3dc5c9309275a7 540 PRINTS PR00072 Malic enzyme signature 393 409 4.3E-62 T 25-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 SMA_RS09415 8da782251eb734aadb3dc5c9309275a7 540 PRINTS PR00072 Malic enzyme signature 73 97 4.3E-62 T 25-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 SMA_RS09415 8da782251eb734aadb3dc5c9309275a7 540 PRINTS PR00072 Malic enzyme signature 171 193 4.3E-62 T 25-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 SMA_RS09415 8da782251eb734aadb3dc5c9309275a7 540 PRINTS PR00072 Malic enzyme signature 135 164 4.3E-62 T 25-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 SMA_RS09415 8da782251eb734aadb3dc5c9309275a7 540 PRINTS PR00072 Malic enzyme signature 255 271 4.3E-62 T 25-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 SMA_RS09415 8da782251eb734aadb3dc5c9309275a7 540 SMART SM01274 67 249 4.7E-86 T 25-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 SMA_RS09415 8da782251eb734aadb3dc5c9309275a7 540 ProSitePatterns PS00331 Malic enzymes signature. 255 271 - T 25-04-2016 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 SMA_RS09415 8da782251eb734aadb3dc5c9309275a7 540 PIRSF PIRSF000106 1 540 3.0E-205 T 25-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 SMA_RS09415 8da782251eb734aadb3dc5c9309275a7 540 SUPERFAMILY SSF51735 259 540 1.01E-84 T 25-04-2016 IPR016040 NAD(P)-binding domain SMA_RS09415 8da782251eb734aadb3dc5c9309275a7 540 Pfam PF03949 Malic enzyme, NAD binding domain 259 514 6.3E-98 T 25-04-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 SMA_RS09415 8da782251eb734aadb3dc5c9309275a7 540 SMART SM00919 259 515 9.3E-107 T 25-04-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 SMA_RS09415 8da782251eb734aadb3dc5c9309275a7 540 PANTHER PTHR23406:SF2 1 540 1.4E-228 T 25-04-2016 SMA_RS09415 8da782251eb734aadb3dc5c9309275a7 540 SUPERFAMILY SSF53223 2 258 4.1E-97 T 25-04-2016 SMA_RS09415 8da782251eb734aadb3dc5c9309275a7 540 PANTHER PTHR23406 1 540 1.4E-228 T 25-04-2016 SMA_RS09415 8da782251eb734aadb3dc5c9309275a7 540 Gene3D G3DSA:3.40.50.720 257 540 1.9E-99 T 25-04-2016 IPR016040 NAD(P)-binding domain SMA_RS09415 8da782251eb734aadb3dc5c9309275a7 540 Gene3D G3DSA:3.40.50.10380 2 256 2.2E-97 T 25-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 SMA_RS09415 8da782251eb734aadb3dc5c9309275a7 540 Pfam PF00390 Malic enzyme, N-terminal domain 68 249 2.6E-67 T 25-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 SMA_RS07145 8f77ad08bfe33f276eaf01b7caefff15 149 SUPERFAMILY SSF160515 1 129 3.4E-34 T 25-04-2016 SMA_RS07145 8f77ad08bfe33f276eaf01b7caefff15 149 PIRSF PIRSF034303 1 147 6.0E-35 T 25-04-2016 IPR012543 Protein of unknown function DUF1694 SMA_RS07145 8f77ad08bfe33f276eaf01b7caefff15 149 Gene3D G3DSA:3.30.1330.30 1 132 4.3E-36 T 25-04-2016 IPR029064 50S ribosomal protein L30e-like SMA_RS07145 8f77ad08bfe33f276eaf01b7caefff15 149 Pfam PF07997 Protein of unknown function (DUF1694) 1 119 4.1E-31 T 25-04-2016 IPR012543 Protein of unknown function DUF1694 SMA_RS08310 cdcd318e171ee44d6d3da4ff077f6bed 246 Gene3D G3DSA:1.10.150.130 4 78 4.5E-7 T 25-04-2016 IPR023109 Integrase/recombinase, N-terminal SMA_RS08310 cdcd318e171ee44d6d3da4ff077f6bed 246 Gene3D G3DSA:1.10.443.10 112 245 3.4E-10 T 25-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 SMA_RS08310 cdcd318e171ee44d6d3da4ff077f6bed 246 Hamap MF_01817 Tyrosine recombinase XerD-like. 1 245 35.047 T 25-04-2016 IPR020876 Tyrosine recombinase XerD-like GO:0005737 SMA_RS08310 cdcd318e171ee44d6d3da4ff077f6bed 246 SUPERFAMILY SSF56349 3 245 3.83E-13 T 25-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 SMA_RS04290 c0f073b550ab20c4aa667832610a2e51 350 PANTHER PTHR30572:SF11 1 350 1.1E-24 T 25-04-2016 SMA_RS04290 c0f073b550ab20c4aa667832610a2e51 350 Pfam PF02687 FtsX-like permease family 233 344 4.3E-11 T 25-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 SMA_RS04290 c0f073b550ab20c4aa667832610a2e51 350 PANTHER PTHR30572 1 350 1.1E-24 T 25-04-2016 SMA_RS03350 1f17d9f3142b34c525bf30b5cba14273 600 Pfam PF08439 Oligopeptidase F 112 181 1.3E-20 T 25-04-2016 IPR013647 Oligopeptidase F, N-terminal domain SMA_RS03350 1f17d9f3142b34c525bf30b5cba14273 600 Gene3D G3DSA:3.40.390.10 377 422 1.7E-4 T 25-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 SMA_RS03350 1f17d9f3142b34c525bf30b5cba14273 600 PANTHER PTHR11804 145 596 5.2E-115 T 25-04-2016 SMA_RS03350 1f17d9f3142b34c525bf30b5cba14273 600 SUPERFAMILY SSF55486 54 596 4.34E-131 T 25-04-2016 SMA_RS03350 1f17d9f3142b34c525bf30b5cba14273 600 PANTHER PTHR11804:SF8 145 596 5.2E-115 T 25-04-2016 SMA_RS03350 1f17d9f3142b34c525bf30b5cba14273 600 TIGRFAM TIGR00181 pepF: oligoendopeptidase F 5 592 1.6E-178 T 25-04-2016 IPR004438 Peptidase M3B, oligoendopeptidase F GO:0004222|GO:0006508 SMA_RS03350 1f17d9f3142b34c525bf30b5cba14273 600 Pfam PF01432 Peptidase family M3 202 581 3.8E-81 T 25-04-2016 IPR001567 Peptidase M3A/M3B GO:0004222|GO:0006508 SMA_RS03350 1f17d9f3142b34c525bf30b5cba14273 600 Gene3D G3DSA:1.10.287.830 181 225 5.1E-19 T 25-04-2016 SMA_RS08635 0ec884d0d3c1aac0d3c1e092afd1a23a 110 SMART SM01103 8 91 1.2E-34 T 25-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 SMA_RS08635 0ec884d0d3c1aac0d3c1e092afd1a23a 110 Gene3D G3DSA:3.30.110.60 7 101 2.7E-30 T 25-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 SMA_RS08635 0ec884d0d3c1aac0d3c1e092afd1a23a 110 PANTHER PTHR31846 7 99 1.7E-29 T 25-04-2016 SMA_RS08635 0ec884d0d3c1aac0d3c1e092afd1a23a 110 ProDom PD010559 RNA-BINDING YHBY UPF0044 PREDICTED RNA RIBOSOMAL CONTAINING KH BINDING DOMAIN 15 102 3.0E-41 T 25-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 SMA_RS08635 0ec884d0d3c1aac0d3c1e092afd1a23a 110 SUPERFAMILY SSF75471 7 101 5.23E-28 T 25-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 SMA_RS08635 0ec884d0d3c1aac0d3c1e092afd1a23a 110 Pfam PF01985 CRS1 / YhbY (CRM) domain 8 91 4.1E-20 T 25-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 SMA_RS08635 0ec884d0d3c1aac0d3c1e092afd1a23a 110 TIGRFAM TIGR00253 RNA_bind_YhbY: putative RNA-binding protein, YhbY family 8 101 1.7E-24 T 25-04-2016 IPR017924 RNA-binding protein YhbY GO:0003723 SMA_RS04125 7df82f68002275edee1058cd920cd508 329 Pfam PF03099 Biotin/lipoate A/B protein ligase family 46 154 2.1E-9 T 25-04-2016 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 SMA_RS04125 7df82f68002275edee1058cd920cd508 329 Pfam PF10437 Bacterial lipoate protein ligase C-terminus 244 327 1.5E-24 T 25-04-2016 IPR019491 Lipoate protein ligase, C-terminal UniPathway: UPA00537|UniPathway: UPA00537 SMA_RS04125 7df82f68002275edee1058cd920cd508 329 SUPERFAMILY SSF82649 243 328 1.31E-23 T 25-04-2016 SMA_RS04125 7df82f68002275edee1058cd920cd508 329 TIGRFAM TIGR00545 lipoyltrans: lipoyltransferase and lipoate-protein ligase 4 321 4.6E-97 T 25-04-2016 IPR004562 Lipoyltransferase/lipoate-protein ligase GO:0009249 UniPathway: UPA00537|UniPathway: UPA00537 SMA_RS04125 7df82f68002275edee1058cd920cd508 329 Gene3D G3DSA:3.90.1550.10 1 241 2.3E-84 T 25-04-2016 SMA_RS04125 7df82f68002275edee1058cd920cd508 329 Gene3D G3DSA:3.30.390.50 243 328 7.0E-29 T 25-04-2016 SMA_RS04125 7df82f68002275edee1058cd920cd508 329 SUPERFAMILY SSF55681 1 241 2.41E-77 T 25-04-2016 SMA_RS08690 6ca7e6edc3fcd9d145a656b776608c27 261 Pfam PF08222 CodY helix-turn-helix domain 201 260 1.9E-38 T 25-04-2016 IPR013198 GTP-sensing helix-turn-helix, CodY, C-terminal SMA_RS08690 6ca7e6edc3fcd9d145a656b776608c27 261 PIRSF PIRSF011572 1 261 9.1E-122 T 25-04-2016 IPR014154 GTP-sensing transcriptional pleiotropic repressor CodY GO:0003677|GO:0003700|GO:0005525|GO:0045892 SMA_RS08690 6ca7e6edc3fcd9d145a656b776608c27 261 Gene3D G3DSA:1.10.10.10 167 237 2.3E-7 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMA_RS08690 6ca7e6edc3fcd9d145a656b776608c27 261 Pfam PF06018 CodY GAF-like domain 3 182 1.4E-75 T 25-04-2016 IPR010312 GTP-sensing transcriptional pleiotropic repressor CodY, N-terminal GO:0003677|GO:0005525 SMA_RS08690 6ca7e6edc3fcd9d145a656b776608c27 261 Hamap MF_00621 GTP-sensing transcriptional pleiotropic repressor CodY [codY]. 1 261 131.023 T 25-04-2016 IPR014154 GTP-sensing transcriptional pleiotropic repressor CodY GO:0003677|GO:0003700|GO:0005525|GO:0045892 SMA_RS08690 6ca7e6edc3fcd9d145a656b776608c27 261 TIGRFAM TIGR02787 codY_Gpos: GTP-sensing transcriptional pleiotropic repressor CodY 4 257 9.2E-123 T 25-04-2016 IPR014154 GTP-sensing transcriptional pleiotropic repressor CodY GO:0003677|GO:0003700|GO:0005525|GO:0045892 SMA_RS08690 6ca7e6edc3fcd9d145a656b776608c27 261 PANTHER PTHR40062 2 261 1.2E-122 T 25-04-2016 SMA_RS08690 6ca7e6edc3fcd9d145a656b776608c27 261 SUPERFAMILY SSF46785 171 260 3.03E-41 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMA_RS03495 d554efedfe118300a60a2dfad07b8f6d 203 PANTHER PTHR30055 1 187 6.6E-21 T 25-04-2016 SMA_RS03495 d554efedfe118300a60a2dfad07b8f6d 203 Pfam PF14278 Transcriptional regulator C-terminal region 92 169 5.7E-9 T 25-04-2016 SMA_RS03495 d554efedfe118300a60a2dfad07b8f6d 203 SUPERFAMILY SSF46689 6 73 3.26E-16 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMA_RS03495 d554efedfe118300a60a2dfad07b8f6d 203 Gene3D G3DSA:1.10.357.10 10 190 5.1E-24 T 25-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 SMA_RS03495 d554efedfe118300a60a2dfad07b8f6d 203 PANTHER PTHR30055:SF50 1 187 6.6E-21 T 25-04-2016 SMA_RS03495 d554efedfe118300a60a2dfad07b8f6d 203 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 57 2.4E-10 T 25-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SMA_RS01585 ff0ddb2a03e8b61ff84f9f8aac1d0b4b 234 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 6 214 1.8E-31 T 25-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 SMA_RS01585 ff0ddb2a03e8b61ff84f9f8aac1d0b4b 234 SUPERFAMILY SSF53254 4 217 3.74E-49 T 25-04-2016 IPR029033 Histidine phosphatase superfamily SMA_RS01585 ff0ddb2a03e8b61ff84f9f8aac1d0b4b 234 SMART SM00855 5 178 1.3E-16 T 25-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 SMA_RS01585 ff0ddb2a03e8b61ff84f9f8aac1d0b4b 234 Gene3D G3DSA:3.40.50.1240 2 225 9.0E-52 T 25-04-2016 IPR029033 Histidine phosphatase superfamily SMA_RS01585 ff0ddb2a03e8b61ff84f9f8aac1d0b4b 234 PANTHER PTHR23029:SF29 1 217 1.3E-76 T 25-04-2016 SMA_RS01585 ff0ddb2a03e8b61ff84f9f8aac1d0b4b 234 PANTHER PTHR23029 1 217 1.3E-76 T 25-04-2016 SMA_RS06565 2858b03fa566d591e16086ec97557187 419 PANTHER PTHR30061:SF21 8 410 2.6E-39 T 25-04-2016 SMA_RS06565 2858b03fa566d591e16086ec97557187 419 SUPERFAMILY SSF53850 42 395 2.4E-56 T 25-04-2016 SMA_RS06565 2858b03fa566d591e16086ec97557187 419 Gene3D G3DSA:3.40.190.10 43 162 3.8E-18 T 25-04-2016 SMA_RS06565 2858b03fa566d591e16086ec97557187 419 Gene3D G3DSA:3.40.190.10 163 335 7.3E-27 T 25-04-2016 SMA_RS06565 2858b03fa566d591e16086ec97557187 419 Pfam PF13416 Bacterial extracellular solute-binding protein 57 359 3.0E-48 T 25-04-2016 SMA_RS06565 2858b03fa566d591e16086ec97557187 419 PANTHER PTHR30061 8 410 2.6E-39 T 25-04-2016 SMA_RS02685 a61e4e644540033047733c84f744cb60 223 PANTHER PTHR24567 9 214 2.8E-30 T 25-04-2016 SMA_RS02685 a61e4e644540033047733c84f744cb60 223 Gene3D G3DSA:1.10.10.10 147 213 2.9E-14 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMA_RS02685 a61e4e644540033047733c84f744cb60 223 SUPERFAMILY SSF46785 146 213 1.21E-12 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMA_RS02685 a61e4e644540033047733c84f744cb60 223 SUPERFAMILY SSF51206 6 143 1.57E-23 T 25-04-2016 IPR018490 Cyclic nucleotide-binding-like SMA_RS02685 a61e4e644540033047733c84f744cb60 223 Pfam PF13545 Crp-like helix-turn-helix domain 150 211 3.7E-13 T 25-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 SMA_RS02685 a61e4e644540033047733c84f744cb60 223 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 188 203 4.7E-6 T 25-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 SMA_RS02685 a61e4e644540033047733c84f744cb60 223 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 172 188 4.7E-6 T 25-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 SMA_RS02685 a61e4e644540033047733c84f744cb60 223 PANTHER PTHR24567:SF30 9 214 2.8E-30 T 25-04-2016 SMA_RS02685 a61e4e644540033047733c84f744cb60 223 SMART SM00419 166 214 3.2E-11 T 25-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 SMA_RS02685 a61e4e644540033047733c84f744cb60 223 Pfam PF00027 Cyclic nucleotide-binding domain 31 114 7.0E-12 T 25-04-2016 IPR000595 Cyclic nucleotide-binding domain SMA_RS02685 a61e4e644540033047733c84f744cb60 223 SMART SM00100 12 132 1.6E-7 T 25-04-2016 IPR000595 Cyclic nucleotide-binding domain SMA_RS02685 a61e4e644540033047733c84f744cb60 223 Gene3D G3DSA:2.60.120.10 9 143 2.1E-22 T 25-04-2016 IPR014710 RmlC-like jelly roll fold SMA_RS10320 bc15302bb5960ab3088ed18be33b93e7 212 Gene3D G3DSA:1.10.357.10 38 208 2.8E-18 T 25-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 SMA_RS10320 bc15302bb5960ab3088ed18be33b93e7 212 PANTHER PTHR30055:SF55 29 208 5.5E-35 T 25-04-2016 SMA_RS10320 bc15302bb5960ab3088ed18be33b93e7 212 SUPERFAMILY SSF46689 37 100 1.03E-13 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMA_RS10320 bc15302bb5960ab3088ed18be33b93e7 212 PANTHER PTHR30055 29 208 5.5E-35 T 25-04-2016 SMA_RS10320 bc15302bb5960ab3088ed18be33b93e7 212 Pfam PF00440 Bacterial regulatory proteins, tetR family 52 91 1.1E-6 T 25-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SMA_RS08385 bf4a1b5ab0b3637bc3b81bcd860ee949 573 PANTHER PTHR30518:SF2 194 573 6.9E-75 T 25-04-2016 SMA_RS08385 bf4a1b5ab0b3637bc3b81bcd860ee949 573 Gene3D G3DSA:3.30.160.60 537 568 9.2E-9 T 25-04-2016 IPR013087 Zinc finger C2H2-type/integrase DNA-binding domain GO:0003676 SMA_RS08385 bf4a1b5ab0b3637bc3b81bcd860ee949 573 PANTHER PTHR30518 194 573 6.9E-75 T 25-04-2016 SMA_RS08385 bf4a1b5ab0b3637bc3b81bcd860ee949 573 Pfam PF02618 YceG-like family 248 565 1.0E-75 T 25-04-2016 IPR003770 Uncharacterised protein family UPF0755, YceG-like SMA_RS08385 bf4a1b5ab0b3637bc3b81bcd860ee949 573 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 211 569 5.0E-77 T 25-04-2016 IPR003770 Uncharacterised protein family UPF0755, YceG-like SMA_RS09170 0d0c99069dfef5777ca3931affb2724e 178 Pfam PF06081 Aromatic acid exporter family member 1 19 164 6.5E-15 T 25-04-2016 IPR010343 Aromatic acid exporter family member 1 SMA_RS03095 759a97cb18f9fc81dd377f1afb2ae8ba 76 PIRSF PIRSF037356 1 76 8.5E-32 T 25-04-2016 IPR014904 Protein of unknown function DUF1797 SMA_RS03095 759a97cb18f9fc81dd377f1afb2ae8ba 76 Pfam PF08796 Protein of unknown function (DUF1797) 8 75 8.3E-24 T 25-04-2016 IPR014904 Protein of unknown function DUF1797 SMA_RS03095 759a97cb18f9fc81dd377f1afb2ae8ba 76 SUPERFAMILY SSF143567 3 76 1.03E-23 T 25-04-2016 SMA_RS02745 77d0ae79761720c05698252215ecaa9a 62 SUPERFAMILY SSF53167 1 60 5.28E-6 T 25-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 SMA_RS02745 77d0ae79761720c05698252215ecaa9a 62 Gene3D G3DSA:3.40.50.1580 1 60 1.4E-5 T 25-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 SMA_RS00090 c0bd1b3db3f92e5c2cf811e36b49c763 85 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 9 54 4.9E-8 T 25-04-2016 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger SMA_RS06770 051a6db01b6d183a4f6588e9a3484d62 391 PANTHER PTHR33217 1 376 9.7E-96 T 25-04-2016 SMA_RS06770 051a6db01b6d183a4f6588e9a3484d62 391 PANTHER PTHR33217:SF1 1 376 9.7E-96 T 25-04-2016 SMA_RS06770 051a6db01b6d183a4f6588e9a3484d62 391 ProSitePatterns PS01007 Transposases, Mutator family, signature. 228 252 - T 25-04-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 SMA_RS06770 051a6db01b6d183a4f6588e9a3484d62 391 Pfam PF00872 Transposase, Mutator family 7 370 1.2E-145 T 25-04-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 SMA_RS02475 18f3deaeeeda9c61950bf696cbef8fcf 205 PANTHER PTHR23117 1 205 1.2E-92 T 25-04-2016 SMA_RS02475 18f3deaeeeda9c61950bf696cbef8fcf 205 SMART SM00072 4 187 1.1E-70 T 25-04-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit SMA_RS02475 18f3deaeeeda9c61950bf696cbef8fcf 205 Hamap MF_00328 Guanylate kinase [gmk]. 3 187 36.393 T 25-04-2016 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 SMA_RS02475 18f3deaeeeda9c61950bf696cbef8fcf 205 Pfam PF00625 Guanylate kinase 7 184 1.9E-51 T 25-04-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit SMA_RS02475 18f3deaeeeda9c61950bf696cbef8fcf 205 SUPERFAMILY SSF52540 4 189 3.28E-67 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS02475 18f3deaeeeda9c61950bf696cbef8fcf 205 PANTHER PTHR23117:SF13 1 205 1.2E-92 T 25-04-2016 SMA_RS02475 18f3deaeeeda9c61950bf696cbef8fcf 205 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 5 184 1.7E-72 T 25-04-2016 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 SMA_RS02475 18f3deaeeeda9c61950bf696cbef8fcf 205 Gene3D G3DSA:3.40.50.300 3 27 2.3E-48 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS02475 18f3deaeeeda9c61950bf696cbef8fcf 205 Gene3D G3DSA:3.40.50.300 88 203 2.3E-48 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS02475 18f3deaeeeda9c61950bf696cbef8fcf 205 Gene3D G3DSA:3.30.63.10 35 87 1.6E-27 T 25-04-2016 SMA_RS02475 18f3deaeeeda9c61950bf696cbef8fcf 205 ProSitePatterns PS00856 Guanylate kinase-like signature. 40 57 - T 25-04-2016 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 SMA_RS08975 beece71223b22a71367a110ba2eb19ec 300 Hamap MF_00053 Ribonuclease HIII [rnhC]. 1 298 37.688 T 25-04-2016 IPR004641 Ribonuclease HIII GO:0004523|GO:0005737|GO:0016070 SMA_RS08975 beece71223b22a71367a110ba2eb19ec 300 TIGRFAM TIGR00716 rnhC: ribonuclease HIII 13 290 4.3E-57 T 25-04-2016 IPR004641 Ribonuclease HIII GO:0004523|GO:0005737|GO:0016070 SMA_RS08975 beece71223b22a71367a110ba2eb19ec 300 PIRSF PIRSF037748 1 299 1.0E-111 T 25-04-2016 IPR004641 Ribonuclease HIII GO:0004523|GO:0005737|GO:0016070 SMA_RS08975 beece71223b22a71367a110ba2eb19ec 300 Gene3D G3DSA:3.30.420.10 85 249 7.5E-37 T 25-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMA_RS08975 beece71223b22a71367a110ba2eb19ec 300 Pfam PF11858 Domain of unknown function (DUF3378) 3 76 9.9E-24 T 25-04-2016 IPR024568 Ribonuclease HIII, N-terminal SMA_RS08975 beece71223b22a71367a110ba2eb19ec 300 Gene3D G3DSA:3.30.310.10 12 60 6.1E-4 T 25-04-2016 IPR012295 Beta2-adaptin/TBP, C-terminal domain SMA_RS08975 beece71223b22a71367a110ba2eb19ec 300 Pfam PF01351 Ribonuclease HII 86 291 5.7E-54 T 25-04-2016 IPR024567 Ribonuclease HII/HIII domain SMA_RS08975 beece71223b22a71367a110ba2eb19ec 300 PANTHER PTHR10954:SF12 12 300 4.4E-88 T 25-04-2016 SMA_RS08975 beece71223b22a71367a110ba2eb19ec 300 PANTHER PTHR10954 12 300 4.4E-88 T 25-04-2016 IPR001352 Ribonuclease HII/HIII GO:0003723|GO:0004523 SMA_RS08975 beece71223b22a71367a110ba2eb19ec 300 SUPERFAMILY SSF53098 84 298 3.03E-49 T 25-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMA_RS05410 9f12a230dfdaba7346f58ba52ac9db79 143 Gene3D G3DSA:3.40.630.30 2 142 5.9E-24 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMA_RS05410 9f12a230dfdaba7346f58ba52ac9db79 143 PANTHER PTHR23091 1 135 3.8E-16 T 25-04-2016 SMA_RS05410 9f12a230dfdaba7346f58ba52ac9db79 143 SUPERFAMILY SSF55729 1 138 1.03E-23 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMA_RS05410 9f12a230dfdaba7346f58ba52ac9db79 143 Pfam PF13508 Acetyltransferase (GNAT) domain 42 133 4.9E-13 T 25-04-2016 IPR000182 GNAT domain GO:0008080 SMA_RS07435 06c69a0e052709b510b4c69bc86666ca 426 PANTHER PTHR30474:SF2 1 410 5.1E-129 T 25-04-2016 SMA_RS07435 06c69a0e052709b510b4c69bc86666ca 426 Pfam PF01098 Cell cycle protein 13 394 1.3E-90 T 25-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 SMA_RS07435 06c69a0e052709b510b4c69bc86666ca 426 PANTHER PTHR30474 1 410 5.1E-129 T 25-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 SMA_RS07440 a3aa3a3fef62a75d7f95a9f1221ffd33 941 SUPERFAMILY SSF51621 17 341 4.39E-287 T 25-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 SMA_RS07440 a3aa3a3fef62a75d7f95a9f1221ffd33 941 SUPERFAMILY SSF51621 380 941 4.39E-287 T 25-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 SMA_RS07440 a3aa3a3fef62a75d7f95a9f1221ffd33 941 Hamap MF_00595 Phosphoenolpyruvate carboxylase [ppc]. 8 941 17.411 T 25-04-2016 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 SMA_RS07440 a3aa3a3fef62a75d7f95a9f1221ffd33 941 ProSitePatterns PS00393 Phosphoenolpyruvate carboxylase active site 2. 595 607 - T 25-04-2016 IPR033129 Phosphoenolpyruvate carboxylase, His active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 SMA_RS07440 a3aa3a3fef62a75d7f95a9f1221ffd33 941 ProSitePatterns PS00781 Phosphoenolpyruvate carboxylase active site 1. 134 145 - T 25-04-2016 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 SMA_RS07440 a3aa3a3fef62a75d7f95a9f1221ffd33 941 PANTHER PTHR30523 382 941 0.0 T 25-04-2016 SMA_RS07440 a3aa3a3fef62a75d7f95a9f1221ffd33 941 PANTHER PTHR30523 3 346 0.0 T 25-04-2016 SMA_RS07440 a3aa3a3fef62a75d7f95a9f1221ffd33 941 Pfam PF00311 Phosphoenolpyruvate carboxylase 129 941 2.2E-253 T 25-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 SMA_RS07440 a3aa3a3fef62a75d7f95a9f1221ffd33 941 PANTHER PTHR30523:SF0 382 941 0.0 T 25-04-2016 SMA_RS07440 a3aa3a3fef62a75d7f95a9f1221ffd33 941 PANTHER PTHR30523:SF0 3 346 0.0 T 25-04-2016 SMA_RS07440 a3aa3a3fef62a75d7f95a9f1221ffd33 941 Gene3D G3DSA:1.20.1440.90 371 434 2.2E-29 T 25-04-2016 SMA_RS07440 a3aa3a3fef62a75d7f95a9f1221ffd33 941 Gene3D G3DSA:1.20.1440.90 272 335 2.2E-29 T 25-04-2016 SMA_RS07440 a3aa3a3fef62a75d7f95a9f1221ffd33 941 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 243 258 2.8E-46 T 25-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 SMA_RS07440 a3aa3a3fef62a75d7f95a9f1221ffd33 941 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 593 613 2.8E-46 T 25-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 SMA_RS07440 a3aa3a3fef62a75d7f95a9f1221ffd33 941 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 770 796 2.8E-46 T 25-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 SMA_RS07440 a3aa3a3fef62a75d7f95a9f1221ffd33 941 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 635 664 2.8E-46 T 25-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 SMA_RS07440 a3aa3a3fef62a75d7f95a9f1221ffd33 941 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 133 146 2.8E-46 T 25-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 SMA_RS07440 a3aa3a3fef62a75d7f95a9f1221ffd33 941 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 186 202 2.8E-46 T 25-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 SMA_RS06800 bacc672d7f24e33bd1f0ca6a15f5ce43 502 PANTHER PTHR24362 130 358 8.7E-31 T 25-04-2016 SMA_RS06800 bacc672d7f24e33bd1f0ca6a15f5ce43 502 Gene3D G3DSA:3.30.200.20 130 217 7.9E-8 T 25-04-2016 SMA_RS06800 bacc672d7f24e33bd1f0ca6a15f5ce43 502 SUPERFAMILY SSF56112 130 350 8.75E-38 T 25-04-2016 IPR011009 Protein kinase-like domain SMA_RS06800 bacc672d7f24e33bd1f0ca6a15f5ce43 502 ProSitePatterns PS00109 Tyrosine protein kinases specific active-site signature. 239 251 - T 25-04-2016 IPR008266 Tyrosine-protein kinase, active site GO:0004672|GO:0006468 SMA_RS06800 bacc672d7f24e33bd1f0ca6a15f5ce43 502 Pfam PF00069 Protein kinase domain 130 323 7.4E-28 T 25-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 SMA_RS06800 bacc672d7f24e33bd1f0ca6a15f5ce43 502 Gene3D G3DSA:1.10.510.10 218 326 3.3E-25 T 25-04-2016 SMA_RS05105 edebc0b4b98df9a4716bf585c866a565 280 PANTHER PTHR32039:SF8 1 280 1.5E-86 T 25-04-2016 SMA_RS05105 edebc0b4b98df9a4716bf585c866a565 280 Pfam PF02481 DNA recombination-mediator protein A 72 269 2.4E-74 T 25-04-2016 IPR003488 DNA recombination-mediator protein A GO:0009294 SMA_RS05105 edebc0b4b98df9a4716bf585c866a565 280 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 74 277 3.7E-71 T 25-04-2016 IPR003488 DNA recombination-mediator protein A GO:0009294 SMA_RS05105 edebc0b4b98df9a4716bf585c866a565 280 SUPERFAMILY SSF102405 75 265 9.46E-34 T 25-04-2016 SMA_RS05105 edebc0b4b98df9a4716bf585c866a565 280 PANTHER PTHR32039 1 280 1.5E-86 T 25-04-2016 SMA_RS05105 edebc0b4b98df9a4716bf585c866a565 280 Gene3D G3DSA:3.40.50.450 107 248 7.5E-10 T 25-04-2016 SMA_RS08850 18bf776a9dd5bbc0204c201f7d9fa3b6 79 Pfam PF01084 Ribosomal protein S18 22 73 3.7E-29 T 25-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS08850 18bf776a9dd5bbc0204c201f7d9fa3b6 79 PANTHER PTHR13479 10 79 5.4E-33 T 25-04-2016 SMA_RS08850 18bf776a9dd5bbc0204c201f7d9fa3b6 79 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 25 78 2.0E-24 T 25-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS08850 18bf776a9dd5bbc0204c201f7d9fa3b6 79 TIGRFAM TIGR00165 S18: ribosomal protein bS18 9 77 1.9E-31 T 25-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS08850 18bf776a9dd5bbc0204c201f7d9fa3b6 79 SUPERFAMILY SSF46911 6 78 1.31E-30 T 25-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS08850 18bf776a9dd5bbc0204c201f7d9fa3b6 79 PRINTS PR00974 Ribosomal protein S18 family signature 33 43 5.6E-21 T 25-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS08850 18bf776a9dd5bbc0204c201f7d9fa3b6 79 PRINTS PR00974 Ribosomal protein S18 family signature 43 50 5.6E-21 T 25-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS08850 18bf776a9dd5bbc0204c201f7d9fa3b6 79 PRINTS PR00974 Ribosomal protein S18 family signature 65 75 5.6E-21 T 25-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS08850 18bf776a9dd5bbc0204c201f7d9fa3b6 79 PRINTS PR00974 Ribosomal protein S18 family signature 51 65 5.6E-21 T 25-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS08850 18bf776a9dd5bbc0204c201f7d9fa3b6 79 ProSitePatterns PS00057 Ribosomal protein S18 signature. 26 49 - T 25-04-2016 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS08850 18bf776a9dd5bbc0204c201f7d9fa3b6 79 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 6 78 22.666 T 25-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS08850 18bf776a9dd5bbc0204c201f7d9fa3b6 79 Gene3D G3DSA:4.10.640.10 13 78 4.1E-34 T 25-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS02420 859c197cf2e2a1bce619f665367cec2f 743 SUPERFAMILY SSF53955 71 281 7.59E-69 T 25-04-2016 IPR023346 Lysozyme-like domain SMA_RS02420 859c197cf2e2a1bce619f665367cec2f 743 PANTHER PTHR32282:SF0 6 582 2.0E-191 T 25-04-2016 SMA_RS02420 859c197cf2e2a1bce619f665367cec2f 743 Gene3D G3DSA:3.40.710.10 259 672 3.1E-88 T 25-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SMA_RS02420 859c197cf2e2a1bce619f665367cec2f 743 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 90 653 1.3E-164 T 25-04-2016 SMA_RS02420 859c197cf2e2a1bce619f665367cec2f 743 PANTHER PTHR32282:SF0 605 672 2.0E-191 T 25-04-2016 SMA_RS02420 859c197cf2e2a1bce619f665367cec2f 743 Gene3D G3DSA:1.10.3810.10 81 258 4.8E-69 T 25-04-2016 SMA_RS02420 859c197cf2e2a1bce619f665367cec2f 743 Pfam PF00905 Penicillin binding protein transpeptidase domain 352 622 9.2E-31 T 25-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 SMA_RS02420 859c197cf2e2a1bce619f665367cec2f 743 Pfam PF00912 Transglycosylase 80 256 1.7E-60 T 25-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 SMA_RS02420 859c197cf2e2a1bce619f665367cec2f 743 PANTHER PTHR32282 605 672 2.0E-191 T 25-04-2016 SMA_RS02420 859c197cf2e2a1bce619f665367cec2f 743 PANTHER PTHR32282 6 582 2.0E-191 T 25-04-2016 SMA_RS02420 859c197cf2e2a1bce619f665367cec2f 743 SUPERFAMILY SSF56601 238 260 7.04E-87 T 25-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SMA_RS02420 859c197cf2e2a1bce619f665367cec2f 743 SUPERFAMILY SSF56601 293 677 7.04E-87 T 25-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SMA_RS00735 781d96ad447a926d3958638c03a3cd5b 66 SUPERFAMILY SSF47413 3 64 1.56E-17 T 25-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SMA_RS00735 781d96ad447a926d3958638c03a3cd5b 66 Gene3D G3DSA:1.10.260.40 1 64 1.4E-24 T 25-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SMA_RS00735 781d96ad447a926d3958638c03a3cd5b 66 SMART SM00530 4 59 1.8E-15 T 25-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SMA_RS00735 781d96ad447a926d3958638c03a3cd5b 66 PANTHER PTHR10245:SF26 1 65 1.1E-21 T 25-04-2016 SMA_RS00735 781d96ad447a926d3958638c03a3cd5b 66 PANTHER PTHR10245 1 65 1.1E-21 T 25-04-2016 SMA_RS00735 781d96ad447a926d3958638c03a3cd5b 66 Pfam PF01381 Helix-turn-helix 5 59 7.8E-16 T 25-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SMA_RS07025 0fd499525170df03c644564c449b0698 274 SUPERFAMILY SSF53850 1 181 2.17E-50 T 25-04-2016 SMA_RS07025 0fd499525170df03c644564c449b0698 274 ProSitePatterns PS00858 Prephenate dehydratase signature 2. 220 227 - T 25-04-2016 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 SMA_RS07025 0fd499525170df03c644564c449b0698 274 Gene3D G3DSA:3.40.190.10 90 166 4.1E-25 T 25-04-2016 SMA_RS07025 0fd499525170df03c644564c449b0698 274 Pfam PF00800 Prephenate dehydratase 3 180 4.5E-57 T 25-04-2016 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 SMA_RS07025 0fd499525170df03c644564c449b0698 274 PANTHER PTHR21022 1 272 1.8E-97 T 25-04-2016 SMA_RS07025 0fd499525170df03c644564c449b0698 274 SUPERFAMILY SSF55021 173 270 3.98E-23 T 25-04-2016 SMA_RS07025 0fd499525170df03c644564c449b0698 274 Gene3D G3DSA:3.30.70.260 189 272 2.0E-25 T 25-04-2016 SMA_RS07025 0fd499525170df03c644564c449b0698 274 Gene3D G3DSA:3.40.190.10 1 89 2.9E-26 T 25-04-2016 SMA_RS10090 87098ea0b03e9728ab441c250dcd718a 326 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 7 121 2.1E-20 T 25-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 SMA_RS10090 87098ea0b03e9728ab441c250dcd718a 326 PANTHER PTHR22604:SF105 1 325 1.7E-67 T 25-04-2016 SMA_RS10090 87098ea0b03e9728ab441c250dcd718a 326 SUPERFAMILY SSF51735 4 156 7.89E-43 T 25-04-2016 IPR016040 NAD(P)-binding domain SMA_RS10090 87098ea0b03e9728ab441c250dcd718a 326 Gene3D G3DSA:3.40.50.720 1 145 1.5E-40 T 25-04-2016 IPR016040 NAD(P)-binding domain SMA_RS10090 87098ea0b03e9728ab441c250dcd718a 326 PANTHER PTHR22604 1 325 1.7E-67 T 25-04-2016 SMA_RS10090 87098ea0b03e9728ab441c250dcd718a 326 Gene3D G3DSA:3.30.360.10 146 325 1.9E-43 T 25-04-2016 SMA_RS10090 87098ea0b03e9728ab441c250dcd718a 326 SUPERFAMILY SSF55347 129 292 5.56E-36 T 25-04-2016 SMA_RS03365 4f6c9ee3badf8c0f2061640b1685c477 233 Gene3D G3DSA:3.40.50.150 9 226 1.2E-63 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMA_RS03365 4f6c9ee3badf8c0f2061640b1685c477 233 Pfam PF01596 O-methyltransferase 34 226 2.1E-31 T 25-04-2016 IPR002935 O-methyltransferase, family 3 GO:0008171 SMA_RS03365 4f6c9ee3badf8c0f2061640b1685c477 233 PANTHER PTHR10509 13 231 1.3E-71 T 25-04-2016 SMA_RS03365 4f6c9ee3badf8c0f2061640b1685c477 233 PANTHER PTHR10509:SF14 13 231 1.3E-71 T 25-04-2016 SMA_RS03365 4f6c9ee3badf8c0f2061640b1685c477 233 SUPERFAMILY SSF53335 2 224 1.55E-49 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMA_RS01285 167d0cf66e3952c441aa3d8044cf7045 288 Gene3D G3DSA:1.10.3720.10 5 279 1.7E-55 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SMA_RS01285 167d0cf66e3952c441aa3d8044cf7045 288 SUPERFAMILY SSF161098 6 285 4.02E-51 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SMA_RS01285 167d0cf66e3952c441aa3d8044cf7045 288 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 83 286 3.7E-16 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SMA_RS01285 167d0cf66e3952c441aa3d8044cf7045 288 PANTHER PTHR30193:SF6 1 287 3.2E-91 T 25-04-2016 SMA_RS01285 167d0cf66e3952c441aa3d8044cf7045 288 PANTHER PTHR30193 1 287 3.2E-91 T 25-04-2016 SMA_RS01940 2a532f85a649ad9db87f87a837a8b577 410 SUPERFAMILY SSF53383 6 402 1.32E-124 T 25-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SMA_RS01940 2a532f85a649ad9db87f87a837a8b577 410 Gene3D G3DSA:3.90.1150.10 283 399 2.5E-28 T 25-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SMA_RS01940 2a532f85a649ad9db87f87a837a8b577 410 TIGRFAM TIGR01979 sufS: cysteine desulfurase, SufS family 8 406 1.8E-183 T 25-04-2016 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 SMA_RS01940 2a532f85a649ad9db87f87a837a8b577 410 PANTHER PTHR11601 6 407 9.5E-204 T 25-04-2016 SMA_RS01940 2a532f85a649ad9db87f87a837a8b577 410 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 216 235 - T 25-04-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site SMA_RS01940 2a532f85a649ad9db87f87a837a8b577 410 Pfam PF00266 Aminotransferase class-V 26 395 4.3E-153 T 25-04-2016 IPR000192 Aminotransferase class V domain SMA_RS01940 2a532f85a649ad9db87f87a837a8b577 410 Gene3D G3DSA:3.40.640.10 37 282 3.2E-85 T 25-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SMA_RS01940 2a532f85a649ad9db87f87a837a8b577 410 PANTHER PTHR11601:SF17 6 407 9.5E-204 T 25-04-2016 SMA_RS01940 2a532f85a649ad9db87f87a837a8b577 410 PIRSF PIRSF005572 23 408 2.6E-49 T 25-04-2016 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 SMA_RS04240 a3aefc98d2cf10ff880e436431e76507 341 Pfam PF03601 Conserved hypothetical protein 698 9 319 2.1E-92 T 25-04-2016 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 SMA_RS04240 a3aefc98d2cf10ff880e436431e76507 341 PANTHER PTHR30106 1 341 6.9E-139 T 25-04-2016 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 SMA_RS04240 a3aefc98d2cf10ff880e436431e76507 341 PANTHER PTHR30106:SF1 1 341 6.9E-139 T 25-04-2016 SMA_RS08775 f06a66b7b1c8c03bb1083b7e7f057304 293 PANTHER PTHR18964:SF10 1 293 1.3E-83 T 25-04-2016 SMA_RS08775 f06a66b7b1c8c03bb1083b7e7f057304 293 ProSitePatterns PS01125 ROK family signature. 131 156 - T 25-04-2016 IPR000600 ROK family SMA_RS08775 f06a66b7b1c8c03bb1083b7e7f057304 293 Gene3D G3DSA:3.30.420.40 1 107 1.3E-39 T 25-04-2016 SMA_RS08775 f06a66b7b1c8c03bb1083b7e7f057304 293 PANTHER PTHR18964 1 293 1.3E-83 T 25-04-2016 SMA_RS08775 f06a66b7b1c8c03bb1083b7e7f057304 293 Gene3D G3DSA:3.30.420.40 108 290 9.4E-60 T 25-04-2016 SMA_RS08775 f06a66b7b1c8c03bb1083b7e7f057304 293 Pfam PF00480 ROK family 5 289 2.3E-78 T 25-04-2016 IPR000600 ROK family SMA_RS08775 f06a66b7b1c8c03bb1083b7e7f057304 293 SUPERFAMILY SSF53067 4 289 7.26E-44 T 25-04-2016 SMA_RS08825 9f041c3e799c001de00196bc006fcea5 314 Gene3D G3DSA:1.20.58.340 236 314 1.2E-18 T 25-04-2016 SMA_RS08825 9f041c3e799c001de00196bc006fcea5 314 Gene3D G3DSA:3.30.460.20 19 116 4.6E-7 T 25-04-2016 SMA_RS08825 9f041c3e799c001de00196bc006fcea5 314 SUPERFAMILY SSF143865 19 246 1.7E-47 T 25-04-2016 SMA_RS08825 9f041c3e799c001de00196bc006fcea5 314 SUPERFAMILY SSF144083 247 312 1.44E-12 T 25-04-2016 SMA_RS08825 9f041c3e799c001de00196bc006fcea5 314 PANTHER PTHR21535 2 314 2.3E-89 T 25-04-2016 SMA_RS08825 9f041c3e799c001de00196bc006fcea5 314 Pfam PF01544 CorA-like Mg2+ transporter protein 22 311 1.5E-65 T 25-04-2016 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 SMA_RS08825 9f041c3e799c001de00196bc006fcea5 314 PANTHER PTHR21535:SF40 2 314 2.3E-89 T 25-04-2016 SMA_RS06515 ea869bffe0f63ddc7b6b2a6f3bdf42b6 58 PANTHER PTHR21109 1 56 2.5E-22 T 25-04-2016 SMA_RS06515 ea869bffe0f63ddc7b6b2a6f3bdf42b6 58 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 3 56 1.0E-21 T 25-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 SMA_RS06515 ea869bffe0f63ddc7b6b2a6f3bdf42b6 58 ProSitePatterns PS01181 Ribosomal protein S21 signature. 13 25 - T 25-04-2016 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS06515 ea869bffe0f63ddc7b6b2a6f3bdf42b6 58 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 22.381 T 25-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 SMA_RS06515 ea869bffe0f63ddc7b6b2a6f3bdf42b6 58 Pfam PF01165 Ribosomal protein S21 5 56 3.8E-21 T 25-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 SMA_RS06515 ea869bffe0f63ddc7b6b2a6f3bdf42b6 58 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 16 43 7.0E-9 T 25-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 SMA_RS06515 ea869bffe0f63ddc7b6b2a6f3bdf42b6 58 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 1.4E-15 T 25-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 SMA_RS06515 ea869bffe0f63ddc7b6b2a6f3bdf42b6 58 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 1.4E-15 T 25-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 SMA_RS06515 ea869bffe0f63ddc7b6b2a6f3bdf42b6 58 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 1.4E-15 T 25-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 SMA_RS06515 ea869bffe0f63ddc7b6b2a6f3bdf42b6 58 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 1.4E-15 T 25-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 SMA_RS07050 34ca6f279b00cb367d279a8b360525c6 107 TIGRFAM TIGR01573 cas2: CRISPR-associated endonuclease Cas2 6 104 1.5E-21 T 25-04-2016 IPR021127 CRISPR-associated endonuclease Cas2 GO:0004521|GO:0043571 SMA_RS07050 34ca6f279b00cb367d279a8b360525c6 107 Hamap MF_01471 CRISPR-associated endoribonuclease Cas2 [cas2]. 6 99 12.4 T 25-04-2016 IPR021127 CRISPR-associated endonuclease Cas2 GO:0004521|GO:0043571 SMA_RS07050 34ca6f279b00cb367d279a8b360525c6 107 Pfam PF09827 CRISPR associated protein Cas2 6 85 5.1E-14 T 25-04-2016 IPR019199 Virulence-associated protein D / CRISPR associated protein Cas2 SMA_RS07050 34ca6f279b00cb367d279a8b360525c6 107 SUPERFAMILY SSF143430 6 87 4.58E-13 T 25-04-2016 SMA_RS03060 2b61c2b1c71bf173b001105d55691da3 255 TIGRFAM TIGR03544 DivI1A_domain: DivIVA domain 3 36 3.2E-14 T 25-04-2016 IPR019933 DivIVA domain SMA_RS03060 2b61c2b1c71bf173b001105d55691da3 255 Pfam PF05103 DivIVA protein 3 143 3.3E-42 T 25-04-2016 IPR007793 DivIVA family SMA_RS03060 2b61c2b1c71bf173b001105d55691da3 255 PANTHER PTHR35794 1 255 2.6E-55 T 25-04-2016 SMA_RS03060 2b61c2b1c71bf173b001105d55691da3 255 PANTHER PTHR35794:SF2 1 255 2.6E-55 T 25-04-2016 SMA_RS03965 e89cbd02d16e471227cb5bf6b14f0cf4 411 SUPERFAMILY SSF48452 128 402 7.78E-18 T 25-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMA_RS03965 e89cbd02d16e471227cb5bf6b14f0cf4 411 Pfam PF13181 Tetratricopeptide repeat 168 199 9.5E-8 T 25-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SMA_RS03965 e89cbd02d16e471227cb5bf6b14f0cf4 411 SMART SM00028 167 200 1.5E-5 T 25-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SMA_RS03965 e89cbd02d16e471227cb5bf6b14f0cf4 411 PANTHER PTHR23083 2 408 7.0E-42 T 25-04-2016 SMA_RS03965 e89cbd02d16e471227cb5bf6b14f0cf4 411 SUPERFAMILY SSF48452 27 155 1.38E-10 T 25-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMA_RS03965 e89cbd02d16e471227cb5bf6b14f0cf4 411 Gene3D G3DSA:1.25.40.10 218 320 1.7E-13 T 25-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMA_RS03965 e89cbd02d16e471227cb5bf6b14f0cf4 411 Gene3D G3DSA:1.25.40.10 114 217 8.7E-15 T 25-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMA_RS03965 e89cbd02d16e471227cb5bf6b14f0cf4 411 Gene3D G3DSA:1.25.40.10 11 113 9.9E-8 T 25-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMA_RS03965 e89cbd02d16e471227cb5bf6b14f0cf4 411 Gene3D G3DSA:1.25.40.10 321 402 2.6E-6 T 25-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMA_RS03965 e89cbd02d16e471227cb5bf6b14f0cf4 411 PANTHER PTHR23083:SF412 2 408 7.0E-42 T 25-04-2016 SMA_RS09610 e32c5c082aa204c0f2657734996d321d 82 SUPERFAMILY SSF46689 1 82 1.72E-12 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMA_RS09610 e32c5c082aa204c0f2657734996d321d 82 Pfam PF01527 Transposase 2 80 1.6E-11 T 25-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 SMA_RS09610 e32c5c082aa204c0f2657734996d321d 82 Gene3D G3DSA:1.10.10.60 8 82 1.4E-12 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMA_RS05295 3dfac6764885ede30d3005460aa49e4e 224 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 220 2.3E-19 T 25-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SMA_RS05295 3dfac6764885ede30d3005460aa49e4e 224 SMART SM00448 2 112 1.2E-35 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMA_RS05295 3dfac6764885ede30d3005460aa49e4e 224 SUPERFAMILY SSF52172 1 176 6.88E-36 T 25-04-2016 IPR011006 CheY-like superfamily SMA_RS05295 3dfac6764885ede30d3005460aa49e4e 224 SMART SM00862 145 220 2.4E-17 T 25-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SMA_RS05295 3dfac6764885ede30d3005460aa49e4e 224 PANTHER PTHR26402 2 222 3.7E-102 T 25-04-2016 SMA_RS05295 3dfac6764885ede30d3005460aa49e4e 224 Gene3D G3DSA:3.40.50.2300 2 120 2.5E-34 T 25-04-2016 SMA_RS05295 3dfac6764885ede30d3005460aa49e4e 224 Gene3D G3DSA:1.10.10.10 125 221 2.0E-24 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMA_RS05295 3dfac6764885ede30d3005460aa49e4e 224 Pfam PF00072 Response regulator receiver domain 4 112 2.2E-22 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMA_RS05295 3dfac6764885ede30d3005460aa49e4e 224 PANTHER PTHR26402:SF518 2 222 3.7E-102 T 25-04-2016 SMA_RS10245 73ab3cb22a0152157a446f3493a91a50 568 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 9 558 44.664 T 25-04-2016 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 SMA_RS10245 73ab3cb22a0152157a446f3493a91a50 568 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 21 558 1.4E-213 T 25-04-2016 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 SMA_RS10245 73ab3cb22a0152157a446f3493a91a50 568 SUPERFAMILY SSF52016 382 560 1.18E-55 T 25-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel SMA_RS10245 73ab3cb22a0152157a446f3493a91a50 568 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 126 136 - T 25-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 SMA_RS10245 73ab3cb22a0152157a446f3493a91a50 568 PANTHER PTHR21000 11 564 0.0 T 25-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 SMA_RS10245 73ab3cb22a0152157a446f3493a91a50 568 PANTHER PTHR21000:SF5 11 564 0.0 T 25-04-2016 SMA_RS10245 73ab3cb22a0152157a446f3493a91a50 568 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 467 478 - T 25-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 SMA_RS10245 73ab3cb22a0152157a446f3493a91a50 568 Pfam PF00920 Dehydratase family 39 555 4.0E-207 T 25-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 SMA_RS10245 73ab3cb22a0152157a446f3493a91a50 568 SUPERFAMILY SSF143975 8 380 7.72E-135 T 25-04-2016 SMA_RS03945 5fce86d2effc2332335376f8cce1fa3c 349 Pfam PF16363 GDP-mannose 4,6 dehydratase 8 317 3.5E-75 T 25-04-2016 IPR016040 NAD(P)-binding domain SMA_RS03945 5fce86d2effc2332335376f8cce1fa3c 349 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 7 330 2.8E-135 T 25-04-2016 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 SMA_RS03945 5fce86d2effc2332335376f8cce1fa3c 349 PANTHER PTHR10366 6 345 6.0E-195 T 25-04-2016 SMA_RS03945 5fce86d2effc2332335376f8cce1fa3c 349 Gene3D G3DSA:3.90.25.10 194 333 2.1E-48 T 25-04-2016 SMA_RS03945 5fce86d2effc2332335376f8cce1fa3c 349 SUPERFAMILY SSF51735 5 336 9.19E-95 T 25-04-2016 IPR016040 NAD(P)-binding domain SMA_RS03945 5fce86d2effc2332335376f8cce1fa3c 349 Gene3D G3DSA:3.40.50.720 4 193 1.7E-58 T 25-04-2016 IPR016040 NAD(P)-binding domain SMA_RS03945 5fce86d2effc2332335376f8cce1fa3c 349 PANTHER PTHR10366:SF437 6 345 6.0E-195 T 25-04-2016 SMA_RS02390 5b94afe02a65bd68082240b5655c3a32 247 PIRSF PIRSF039085 1 244 8.6E-95 T 25-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 SMA_RS02390 5b94afe02a65bd68082240b5655c3a32 247 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SMA_RS02390 5b94afe02a65bd68082240b5655c3a32 247 Gene3D G3DSA:3.40.50.300 1 239 5.0E-80 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS02390 5b94afe02a65bd68082240b5655c3a32 247 PANTHER PTHR24220:SF327 3 239 1.2E-110 T 25-04-2016 SMA_RS02390 5b94afe02a65bd68082240b5655c3a32 247 PANTHER PTHR24220 3 239 1.2E-110 T 25-04-2016 SMA_RS02390 5b94afe02a65bd68082240b5655c3a32 247 SMART SM00382 26 216 1.5E-17 T 25-04-2016 IPR003593 AAA+ ATPase domain SMA_RS02390 5b94afe02a65bd68082240b5655c3a32 247 Pfam PF00005 ABC transporter 17 168 3.2E-33 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMA_RS02390 5b94afe02a65bd68082240b5655c3a32 247 SUPERFAMILY SSF52540 1 238 1.24E-73 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS09270 05ae22ac119376728f1a534d9bea6508 243 SMART SM00448 2 123 7.9E-8 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMA_RS09270 05ae22ac119376728f1a534d9bea6508 243 Pfam PF00072 Response regulator receiver domain 11 123 1.9E-10 T 25-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SMA_RS09270 05ae22ac119376728f1a534d9bea6508 243 SMART SM00850 149 243 9.6E-16 T 25-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 SMA_RS09270 05ae22ac119376728f1a534d9bea6508 243 Gene3D G3DSA:3.40.50.2300 2 135 8.4E-14 T 25-04-2016 SMA_RS09270 05ae22ac119376728f1a534d9bea6508 243 Pfam PF04397 LytTr DNA-binding domain 152 238 6.2E-20 T 25-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 SMA_RS09270 05ae22ac119376728f1a534d9bea6508 243 PANTHER PTHR26402 2 223 3.7E-23 T 25-04-2016 SMA_RS09270 05ae22ac119376728f1a534d9bea6508 243 Gene3D G3DSA:2.40.50.40 141 208 2.4E-15 T 25-04-2016 SMA_RS09270 05ae22ac119376728f1a534d9bea6508 243 PANTHER PTHR26402:SF577 2 223 3.7E-23 T 25-04-2016 SMA_RS09270 05ae22ac119376728f1a534d9bea6508 243 SUPERFAMILY SSF52172 1 138 7.12E-11 T 25-04-2016 IPR011006 CheY-like superfamily SMA_RS04975 cc4760ebfb65999a5e4b7317482c482f 441 Pfam PF01554 MatE 238 398 1.6E-22 T 25-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 SMA_RS04975 cc4760ebfb65999a5e4b7317482c482f 441 Pfam PF01554 MatE 17 177 1.8E-26 T 25-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 SMA_RS04975 cc4760ebfb65999a5e4b7317482c482f 441 PANTHER PTHR11206 7 441 5.6E-73 T 25-04-2016 SMA_RS04975 cc4760ebfb65999a5e4b7317482c482f 441 PIRSF PIRSF006603 2 441 7.5E-62 T 25-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 SMA_RS04975 cc4760ebfb65999a5e4b7317482c482f 441 PANTHER PTHR11206:SF146 7 441 5.6E-73 T 25-04-2016 SMA_RS04975 cc4760ebfb65999a5e4b7317482c482f 441 TIGRFAM TIGR00797 matE: MATE efflux family protein 17 411 1.3E-60 T 25-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 SMA_RS07955 c4e64fc8358aad9ae526593c495d1a55 410 Gene3D G3DSA:3.40.630.30 1 161 4.2E-41 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMA_RS07955 c4e64fc8358aad9ae526593c495d1a55 410 PANTHER PTHR36174 1 410 6.0E-141 T 25-04-2016 SMA_RS07955 c4e64fc8358aad9ae526593c495d1a55 410 Pfam PF02388 FemAB family 6 406 4.8E-137 T 25-04-2016 IPR003447 FemABX peptidyl transferase GO:0009252|GO:0016755 SMA_RS07955 c4e64fc8358aad9ae526593c495d1a55 410 SUPERFAMILY SSF55729 306 402 2.44E-28 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMA_RS07955 c4e64fc8358aad9ae526593c495d1a55 410 SUPERFAMILY SSF46589 239 302 3.82E-11 T 25-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 SMA_RS07955 c4e64fc8358aad9ae526593c495d1a55 410 Gene3D G3DSA:3.40.630.30 305 382 8.0E-47 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMA_RS07955 c4e64fc8358aad9ae526593c495d1a55 410 Gene3D G3DSA:3.40.630.30 162 238 8.0E-47 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMA_RS07955 c4e64fc8358aad9ae526593c495d1a55 410 SUPERFAMILY SSF55729 1 159 2.97E-38 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMA_RS07955 c4e64fc8358aad9ae526593c495d1a55 410 SUPERFAMILY SSF55729 162 239 2.44E-28 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMA_RS07955 c4e64fc8358aad9ae526593c495d1a55 410 PANTHER PTHR36174:SF2 1 410 6.0E-141 T 25-04-2016 SMA_RS05155 ef4e5156981ccafc895f5536a6c57447 419 Gene3D G3DSA:3.40.640.10 105 325 2.9E-59 T 25-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SMA_RS05155 ef4e5156981ccafc895f5536a6c57447 419 SMART SM00345 8 67 3.8E-10 T 25-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SMA_RS05155 ef4e5156981ccafc895f5536a6c57447 419 Gene3D G3DSA:1.10.10.10 2 68 9.3E-19 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMA_RS05155 ef4e5156981ccafc895f5536a6c57447 419 Pfam PF00155 Aminotransferase class I and II 102 297 1.2E-12 T 25-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 SMA_RS05155 ef4e5156981ccafc895f5536a6c57447 419 PANTHER PTHR11751:SF294 55 355 2.5E-62 T 25-04-2016 SMA_RS05155 ef4e5156981ccafc895f5536a6c57447 419 SUPERFAMILY SSF46785 3 71 5.22E-14 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMA_RS05155 ef4e5156981ccafc895f5536a6c57447 419 Pfam PF00392 Bacterial regulatory proteins, gntR family 4 67 6.6E-10 T 25-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SMA_RS05155 ef4e5156981ccafc895f5536a6c57447 419 PANTHER PTHR11751 55 355 2.5E-62 T 25-04-2016 SMA_RS05155 ef4e5156981ccafc895f5536a6c57447 419 SUPERFAMILY SSF53383 52 373 1.05E-50 T 25-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SMA_RS01075 01c9b1eb53be6d832a6752510f47e96a 727 PANTHER PTHR30009:SF8 11 562 6.0E-300 T 25-04-2016 SMA_RS01075 01c9b1eb53be6d832a6752510f47e96a 727 Pfam PF00367 phosphotransferase system, EIIB 479 510 3.4E-15 T 25-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 SMA_RS01075 01c9b1eb53be6d832a6752510f47e96a 727 SUPERFAMILY SSF55604 477 550 1.06E-19 T 25-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 SMA_RS01075 01c9b1eb53be6d832a6752510f47e96a 727 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 581 704 3.3E-46 T 25-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SMA_RS01075 01c9b1eb53be6d832a6752510f47e96a 727 PANTHER PTHR30009 11 562 6.0E-300 T 25-04-2016 SMA_RS01075 01c9b1eb53be6d832a6752510f47e96a 727 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 489 506 - T 25-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 SMA_RS01075 01c9b1eb53be6d832a6752510f47e96a 727 Gene3D G3DSA:2.70.70.10 577 725 2.3E-55 T 25-04-2016 SMA_RS01075 01c9b1eb53be6d832a6752510f47e96a 727 Gene3D G3DSA:3.30.1360.60 474 551 5.2E-26 T 25-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 SMA_RS01075 01c9b1eb53be6d832a6752510f47e96a 727 SUPERFAMILY SSF51261 578 724 6.63E-49 T 25-04-2016 IPR011055 Duplicated hybrid motif SMA_RS01075 01c9b1eb53be6d832a6752510f47e96a 727 Pfam PF02378 Phosphotransferase system, EIIC 19 381 1.7E-56 T 25-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 SMA_RS01075 01c9b1eb53be6d832a6752510f47e96a 727 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 441 536 6.4E-20 T 25-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 SMA_RS01075 01c9b1eb53be6d832a6752510f47e96a 727 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 584 701 7.8E-39 T 25-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SMA_RS01075 01c9b1eb53be6d832a6752510f47e96a 727 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 643 655 - T 25-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SMA_RS01075 01c9b1eb53be6d832a6752510f47e96a 727 TIGRFAM TIGR02003 PTS-II-BC-unk1: PTS system, IIBC component 8 552 6.9E-299 T 25-04-2016 IPR011300 Phosphotransferase system, IIBC component KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SMA_RS10340 b9380ebffc34133e60958900bcf586a6 453 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 10 448 2.3E-168 T 25-04-2016 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 SMA_RS10340 b9380ebffc34133e60958900bcf586a6 453 Gene3D G3DSA:1.10.860.10 10 112 1.6E-35 T 25-04-2016 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal SMA_RS10340 b9380ebffc34133e60958900bcf586a6 453 Pfam PF00772 DnaB-like helicase N terminal domain 10 111 6.0E-33 T 25-04-2016 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 SMA_RS10340 b9380ebffc34133e60958900bcf586a6 453 Gene3D G3DSA:3.40.50.300 173 448 1.9E-104 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS10340 b9380ebffc34133e60958900bcf586a6 453 SUPERFAMILY SSF52540 183 439 7.36E-50 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS10340 b9380ebffc34133e60958900bcf586a6 453 SUPERFAMILY SSF48024 8 119 1.02E-35 T 25-04-2016 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 SMA_RS10340 b9380ebffc34133e60958900bcf586a6 453 PANTHER PTHR30153 3 453 5.0E-194 T 25-04-2016 SMA_RS10340 b9380ebffc34133e60958900bcf586a6 453 Pfam PF03796 DnaB-like helicase C terminal domain 185 445 6.0E-110 T 25-04-2016 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 SMA_RS07495 da8465b0b0fc8626fbd40bddbc3c2f24 251 SUPERFAMILY SSF56784 6 248 1.54E-31 T 25-04-2016 IPR023214 HAD-like domain SMA_RS07495 da8465b0b0fc8626fbd40bddbc3c2f24 251 Pfam PF13419 Haloacid dehalogenase-like hydrolase 10 219 2.5E-19 T 25-04-2016 IPR023214 HAD-like domain SMA_RS07495 da8465b0b0fc8626fbd40bddbc3c2f24 251 PANTHER PTHR12725 1 249 3.2E-23 T 25-04-2016 SMA_RS07495 da8465b0b0fc8626fbd40bddbc3c2f24 251 Gene3D G3DSA:3.40.50.1000 5 248 5.5E-35 T 25-04-2016 IPR023214 HAD-like domain SMA_RS03180 3d4428fcfe481f6df2ca5aac6cd8c81c 282 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 53 263 8.6E-30 T 25-04-2016 IPR013830 SGNH hydrolase-type esterase domain SMA_RS03180 3d4428fcfe481f6df2ca5aac6cd8c81c 282 SUPERFAMILY SSF52266 48 273 1.97E-41 T 25-04-2016 IPR013830 SGNH hydrolase-type esterase domain SMA_RS03180 3d4428fcfe481f6df2ca5aac6cd8c81c 282 PANTHER PTHR30383:SF5 44 278 1.7E-29 T 25-04-2016 SMA_RS03180 3d4428fcfe481f6df2ca5aac6cd8c81c 282 Gene3D G3DSA:3.40.50.1110 48 276 3.4E-56 T 25-04-2016 IPR013830 SGNH hydrolase-type esterase domain SMA_RS03180 3d4428fcfe481f6df2ca5aac6cd8c81c 282 PANTHER PTHR30383 44 278 1.7E-29 T 25-04-2016 SMA_RS10345 3bc7056d8b6555ec61f52cadd1510bb8 150 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 25-04-2016 IPR020070 Ribosomal protein L9, N-terminal SMA_RS10345 3bc7056d8b6555ec61f52cadd1510bb8 150 PANTHER PTHR21368 1 149 1.8E-42 T 25-04-2016 IPR000244 Ribosomal protein L9 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS10345 3bc7056d8b6555ec61f52cadd1510bb8 150 SUPERFAMILY SSF55658 1 56 1.74E-15 T 25-04-2016 IPR009027 Ribosomal protein L9/RNase H1, N-terminal SMA_RS10345 3bc7056d8b6555ec61f52cadd1510bb8 150 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 149 3.8E-40 T 25-04-2016 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS10345 3bc7056d8b6555ec61f52cadd1510bb8 150 Gene3D G3DSA:3.40.5.10 1 52 8.2E-21 T 25-04-2016 IPR020070 Ribosomal protein L9, N-terminal SMA_RS10345 3bc7056d8b6555ec61f52cadd1510bb8 150 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 150 24.398 T 25-04-2016 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS10345 3bc7056d8b6555ec61f52cadd1510bb8 150 SUPERFAMILY SSF55653 57 149 1.7E-26 T 25-04-2016 IPR020069 Ribosomal protein L9, C-terminal SMA_RS10345 3bc7056d8b6555ec61f52cadd1510bb8 150 Gene3D G3DSA:3.10.430.100 61 149 1.0E-30 T 25-04-2016 IPR020069 Ribosomal protein L9, C-terminal SMA_RS10345 3bc7056d8b6555ec61f52cadd1510bb8 150 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 46 1.1E-19 T 25-04-2016 IPR020070 Ribosomal protein L9, N-terminal SMA_RS10345 3bc7056d8b6555ec61f52cadd1510bb8 150 Pfam PF03948 Ribosomal protein L9, C-terminal domain 63 148 3.2E-29 T 25-04-2016 IPR020069 Ribosomal protein L9, C-terminal SMA_RS02455 761dcc5afa54684da9c5fed6ce91180d 96 Pfam PF01527 Transposase 5 74 1.9E-13 T 25-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 SMA_RS02455 761dcc5afa54684da9c5fed6ce91180d 96 SUPERFAMILY SSF46689 6 93 4.03E-17 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMA_RS02455 761dcc5afa54684da9c5fed6ce91180d 96 Gene3D G3DSA:1.10.10.60 10 88 1.0E-13 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMA_RS02455 761dcc5afa54684da9c5fed6ce91180d 96 PANTHER PTHR33215 1 93 4.9E-15 T 25-04-2016 SMA_RS03770 a00716ebbb17907a1474c2f065a9ffcd 292 Gene3D G3DSA:1.10.287.80 240 286 4.2E-25 T 25-04-2016 SMA_RS03770 a00716ebbb17907a1474c2f065a9ffcd 292 PRINTS PR00126 ATP synthase gamma subunit signature 169 186 5.1E-35 T 25-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 SMA_RS03770 a00716ebbb17907a1474c2f065a9ffcd 292 PRINTS PR00126 ATP synthase gamma subunit signature 238 257 5.1E-35 T 25-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 SMA_RS03770 a00716ebbb17907a1474c2f065a9ffcd 292 PRINTS PR00126 ATP synthase gamma subunit signature 269 290 5.1E-35 T 25-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 SMA_RS03770 a00716ebbb17907a1474c2f065a9ffcd 292 PRINTS PR00126 ATP synthase gamma subunit signature 76 95 5.1E-35 T 25-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 SMA_RS03770 a00716ebbb17907a1474c2f065a9ffcd 292 PANTHER PTHR11693 1 292 1.3E-90 T 25-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 SMA_RS03770 a00716ebbb17907a1474c2f065a9ffcd 292 Gene3D G3DSA:1.10.287.80 21 61 4.6E-25 T 25-04-2016 SMA_RS03770 a00716ebbb17907a1474c2f065a9ffcd 292 Gene3D G3DSA:1.10.287.80 206 239 4.6E-25 T 25-04-2016 SMA_RS03770 a00716ebbb17907a1474c2f065a9ffcd 292 Gene3D G3DSA:3.40.1380.10 68 194 1.7E-41 T 25-04-2016 SMA_RS03770 a00716ebbb17907a1474c2f065a9ffcd 292 SUPERFAMILY SSF52943 4 291 3.14E-84 T 25-04-2016 IPR023633 ATPase, F1 complex, gamma subunit domain SMA_RS03770 a00716ebbb17907a1474c2f065a9ffcd 292 Pfam PF00231 ATP synthase 4 291 1.0E-81 T 25-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 SMA_RS03770 a00716ebbb17907a1474c2f065a9ffcd 292 Hamap MF_00815 ATP synthase gamma chain [atpG]. 2 291 31.566 T 25-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 SMA_RS03770 a00716ebbb17907a1474c2f065a9ffcd 292 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 277 290 - T 25-04-2016 IPR023632 ATPase, F1 complex, gamma subunit conserved site SMA_RS03770 a00716ebbb17907a1474c2f065a9ffcd 292 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 4 291 6.9E-97 T 25-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 SMA_RS06460 c9f7c8ea61bbcd327f7e2d8a3e0c93b6 565 Pfam PF05045 Rhamnan synthesis protein F 34 477 1.1E-77 T 25-04-2016 IPR007739 Rhamnan synthesis F SMA_RS03740 f51a7a2c75860f9d2e897932f0363573 306 Gene3D G3DSA:3.20.20.80 21 89 4.2E-16 T 25-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 SMA_RS03740 f51a7a2c75860f9d2e897932f0363573 306 SUPERFAMILY SSF51445 18 90 7.76E-19 T 25-04-2016 IPR017853 Glycoside hydrolase superfamily SMA_RS03740 f51a7a2c75860f9d2e897932f0363573 306 SUPERFAMILY SSF53756 88 305 2.83E-73 T 25-04-2016 SMA_RS03740 f51a7a2c75860f9d2e897932f0363573 306 Gene3D G3DSA:3.40.50.2000 90 288 3.3E-70 T 25-04-2016 SMA_RS03740 f51a7a2c75860f9d2e897932f0363573 306 PANTHER PTHR11468 88 305 2.0E-84 T 25-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 SMA_RS03740 f51a7a2c75860f9d2e897932f0363573 306 Pfam PF00343 Carbohydrate phosphorylase 87 304 2.9E-85 T 25-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 SMA_RS03740 f51a7a2c75860f9d2e897932f0363573 306 PANTHER PTHR11468:SF3 88 305 2.0E-84 T 25-04-2016 SMA_RS00480 02d739eecbcbbb0b81f6e4b66b208bc3 157 Pfam PF01610 Transposase 1 150 1.9E-24 T 25-04-2016 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain SMA_RS00480 02d739eecbcbbb0b81f6e4b66b208bc3 157 PANTHER PTHR33498:SF1 1 137 1.5E-25 T 25-04-2016 SMA_RS00480 02d739eecbcbbb0b81f6e4b66b208bc3 157 PANTHER PTHR33498 1 137 1.5E-25 T 25-04-2016 SMA_RS10505 9aab2020e97224d0bb289408c1e95c69 864 PANTHER PTHR38454:SF1 1 855 7.3E-95 T 25-04-2016 SMA_RS10505 9aab2020e97224d0bb289408c1e95c69 864 PANTHER PTHR38454 1 855 7.3E-95 T 25-04-2016 SMA_RS10505 9aab2020e97224d0bb289408c1e95c69 864 Pfam PF09586 Bacterial membrane protein YfhO 18 840 1.1E-252 T 25-04-2016 IPR018580 Uncharacterised protein family YfhO SMA_RS07420 9bb564d190baa1180a80180cc31c73e6 323 SUPERFAMILY SSF53098 183 320 2.28E-18 T 25-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMA_RS07420 9bb564d190baa1180a80180cc31c73e6 323 PANTHER PTHR10948 10 318 6.7E-75 T 25-04-2016 SMA_RS07420 9bb564d190baa1180a80180cc31c73e6 323 Pfam PF13936 Helix-turn-helix domain 14 55 9.2E-17 T 25-04-2016 IPR025246 Transposase IS30-like HTH domain SMA_RS07420 9bb564d190baa1180a80180cc31c73e6 323 Gene3D G3DSA:3.30.420.10 191 320 2.7E-10 T 25-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMA_RS07420 9bb564d190baa1180a80180cc31c73e6 323 Gene3D G3DSA:1.10.10.10 24 56 1.3E-4 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMA_RS07420 9bb564d190baa1180a80180cc31c73e6 323 Pfam PF00665 Integrase core domain 192 283 1.3E-7 T 25-04-2016 IPR001584 Integrase, catalytic core GO:0015074 SMA_RS07180 9fba006a7bc57a5ec4234183c684c483 252 PANTHER PTHR21235 1 252 2.4E-123 T 25-04-2016 SMA_RS07180 9fba006a7bc57a5ec4234183c684c483 252 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 1 251 2.8E-110 T 25-04-2016 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 UniPathway: UPA00031 SMA_RS07180 9fba006a7bc57a5ec4234183c684c483 252 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 1 251 48.317 T 25-04-2016 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 UniPathway: UPA00031 SMA_RS07180 9fba006a7bc57a5ec4234183c684c483 252 Pfam PF00977 Histidine biosynthesis protein 5 234 6.7E-89 T 25-04-2016 IPR006062 Histidine biosynthesis GO:0000105 SMA_RS07180 9fba006a7bc57a5ec4234183c684c483 252 SUPERFAMILY SSF51366 1 251 1.41E-82 T 25-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 SMA_RS07180 9fba006a7bc57a5ec4234183c684c483 252 Gene3D G3DSA:3.20.20.70 4 251 2.2E-103 T 25-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SMA_RS07180 9fba006a7bc57a5ec4234183c684c483 252 PANTHER PTHR21235:SF2 1 252 2.4E-123 T 25-04-2016 SMA_RS08860 3a0c027e87c4154020016ed95e99e246 96 SUPERFAMILY SSF54995 1 95 1.96E-32 T 25-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 SMA_RS08860 3a0c027e87c4154020016ed95e99e246 96 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 95 3.4E-26 T 25-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 SMA_RS08860 3a0c027e87c4154020016ed95e99e246 96 Pfam PF01250 Ribosomal protein S6 3 93 4.4E-27 T 25-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 SMA_RS08860 3a0c027e87c4154020016ed95e99e246 96 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 96 22.143 T 25-04-2016 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 SMA_RS08860 3a0c027e87c4154020016ed95e99e246 96 Gene3D G3DSA:3.30.70.60 1 95 1.4E-34 T 25-04-2016 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 SMA_RS08860 3a0c027e87c4154020016ed95e99e246 96 PANTHER PTHR21011 1 95 1.7E-26 T 25-04-2016 SMA_RS00930 9b9a28340dc01e4daa22072112efba95 402 PANTHER PTHR11360:SF135 1 391 5.4E-123 T 25-04-2016 SMA_RS00930 9b9a28340dc01e4daa22072112efba95 402 SUPERFAMILY SSF103473 4 397 4.05E-55 T 25-04-2016 IPR020846 Major facilitator superfamily domain SMA_RS00930 9b9a28340dc01e4daa22072112efba95 402 PANTHER PTHR11360 1 391 5.4E-123 T 25-04-2016 SMA_RS00930 9b9a28340dc01e4daa22072112efba95 402 Pfam PF07690 Major Facilitator Superfamily 18 268 2.8E-25 T 25-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SMA_RS00930 9b9a28340dc01e4daa22072112efba95 402 Gene3D G3DSA:1.20.1250.20 8 184 1.9E-20 T 25-04-2016 SMA_RS00930 9b9a28340dc01e4daa22072112efba95 402 Gene3D G3DSA:1.20.1250.20 215 399 5.7E-21 T 25-04-2016 SMA_RS00685 f4320e581498fc11bc0f5ab186da1bd7 109 Pfam PF06279 Protein of unknown function (DUF1033) 1 109 8.2E-45 T 25-04-2016 IPR010434 Protein of unknown function DUF1033 SMA_RS10115 ad29d04371453f6aaeae6a3ccafedf2b 168 Gene3D G3DSA:3.40.630.30 1 159 1.9E-17 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMA_RS10115 ad29d04371453f6aaeae6a3ccafedf2b 168 Pfam PF13302 Acetyltransferase (GNAT) domain 2 148 6.3E-8 T 25-04-2016 IPR000182 GNAT domain GO:0008080 SMA_RS10115 ad29d04371453f6aaeae6a3ccafedf2b 168 SUPERFAMILY SSF55729 2 157 2.05E-18 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMA_RS10115 ad29d04371453f6aaeae6a3ccafedf2b 168 PANTHER PTHR39173 1 166 6.1E-47 T 25-04-2016 SMA_RS01080 c05e7a285674e981cee88fb13bd5d281 271 Gene3D G3DSA:3.60.10.10 2 270 7.7E-24 T 25-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase SMA_RS01080 c05e7a285674e981cee88fb13bd5d281 271 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 6 262 3.7E-19 T 25-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase SMA_RS01080 c05e7a285674e981cee88fb13bd5d281 271 PANTHER PTHR15822 3 270 1.3E-15 T 25-04-2016 SMA_RS01080 c05e7a285674e981cee88fb13bd5d281 271 PANTHER PTHR15822:SF7 3 270 1.3E-15 T 25-04-2016 SMA_RS01080 c05e7a285674e981cee88fb13bd5d281 271 SUPERFAMILY SSF56219 3 270 6.81E-31 T 25-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase SMA_RS10200 6f9ba632d9a58aa59c57792e3096d240 145 Pfam PF01316 Arginine repressor, DNA binding domain 1 66 4.0E-23 T 25-04-2016 IPR020900 Arginine repressor, DNA-binding domain GO:0003700|GO:0006355|GO:0006525 UniPathway: UPA00068 SMA_RS10200 6f9ba632d9a58aa59c57792e3096d240 145 PANTHER PTHR34471 1 141 9.1E-42 T 25-04-2016 SMA_RS10200 6f9ba632d9a58aa59c57792e3096d240 145 PRINTS PR01467 Bacterial arginine repressor signature 21 34 5.9E-18 T 25-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 SMA_RS10200 6f9ba632d9a58aa59c57792e3096d240 145 PRINTS PR01467 Bacterial arginine repressor signature 37 52 5.9E-18 T 25-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 SMA_RS10200 6f9ba632d9a58aa59c57792e3096d240 145 PRINTS PR01467 Bacterial arginine repressor signature 84 97 5.9E-18 T 25-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 SMA_RS10200 6f9ba632d9a58aa59c57792e3096d240 145 PRINTS PR01467 Bacterial arginine repressor signature 114 129 5.9E-18 T 25-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 SMA_RS10200 6f9ba632d9a58aa59c57792e3096d240 145 ProDom PD007402 ARGININE REPRESSOR TRANSCRIPTION BIOSYNTHESIS DNA-BINDING REGULATION AMINO-ACID ARGR TRANSCRIPTIONAL FAMILY 89 141 4.0E-6 T 25-04-2016 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 UniPathway: UPA00068 SMA_RS10200 6f9ba632d9a58aa59c57792e3096d240 145 Gene3D G3DSA:1.10.10.10 9 66 2.8E-24 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMA_RS10200 6f9ba632d9a58aa59c57792e3096d240 145 Pfam PF02863 Arginine repressor, C-terminal domain 77 141 3.8E-21 T 25-04-2016 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 UniPathway: UPA00068 SMA_RS10200 6f9ba632d9a58aa59c57792e3096d240 145 PANTHER PTHR34471:SF1 1 141 9.1E-42 T 25-04-2016 SMA_RS10200 6f9ba632d9a58aa59c57792e3096d240 145 Gene3D G3DSA:3.30.1360.40 76 142 8.9E-25 T 25-04-2016 IPR024946 Arginine repressor C-terminal-like domain SMA_RS10200 6f9ba632d9a58aa59c57792e3096d240 145 Hamap MF_00173 Arginine repressor [argR]. 1 145 54.694 T 25-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 SMA_RS10200 6f9ba632d9a58aa59c57792e3096d240 145 TIGRFAM TIGR01529 argR_whole: arginine repressor 5 143 7.6E-51 T 25-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 SMA_RS10200 6f9ba632d9a58aa59c57792e3096d240 145 SUPERFAMILY SSF55252 76 141 6.8E-19 T 25-04-2016 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 UniPathway: UPA00068 SMA_RS10200 6f9ba632d9a58aa59c57792e3096d240 145 SUPERFAMILY SSF46785 1 66 1.09E-20 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMA_RS01020 fec6bd56cbaeb4997b52916694c9f234 408 PANTHER PTHR23132:SF9 56 290 2.3E-15 T 25-04-2016 SMA_RS01020 fec6bd56cbaeb4997b52916694c9f234 408 SUPERFAMILY SSF56059 108 323 2.41E-26 T 25-04-2016 SMA_RS01020 fec6bd56cbaeb4997b52916694c9f234 408 Gene3D G3DSA:3.30.470.20 105 387 2.7E-21 T 25-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 SMA_RS01020 fec6bd56cbaeb4997b52916694c9f234 408 Pfam PF13535 ATP-grasp domain 142 295 1.5E-7 T 25-04-2016 SMA_RS01020 fec6bd56cbaeb4997b52916694c9f234 408 PANTHER PTHR23132 56 290 2.3E-15 T 25-04-2016 SMA_RS10430 30ceafff4fe5adb1a82354adbff9904d 67 Gene3D G3DSA:2.40.50.140 1 64 5.0E-29 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMA_RS10430 30ceafff4fe5adb1a82354adbff9904d 67 SUPERFAMILY SSF50249 1 65 1.39E-22 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMA_RS10430 30ceafff4fe5adb1a82354adbff9904d 67 PIRSF PIRSF002599 1 67 2.1E-22 T 25-04-2016 IPR012156 Cold shock, CspA GO:0003676 SMA_RS10430 30ceafff4fe5adb1a82354adbff9904d 67 PANTHER PTHR11544 1 66 6.0E-32 T 25-04-2016 SMA_RS10430 30ceafff4fe5adb1a82354adbff9904d 67 Pfam PF00313 'Cold-shock' DNA-binding domain 2 65 2.5E-28 T 25-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 SMA_RS10430 30ceafff4fe5adb1a82354adbff9904d 67 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 33 - T 25-04-2016 IPR019844 Cold-shock conserved site SMA_RS10430 30ceafff4fe5adb1a82354adbff9904d 67 PRINTS PR00050 Cold shock protein signature 39 57 4.1E-18 T 25-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 SMA_RS10430 30ceafff4fe5adb1a82354adbff9904d 67 PRINTS PR00050 Cold shock protein signature 4 19 4.1E-18 T 25-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 SMA_RS10430 30ceafff4fe5adb1a82354adbff9904d 67 PRINTS PR00050 Cold shock protein signature 24 33 4.1E-18 T 25-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 SMA_RS10430 30ceafff4fe5adb1a82354adbff9904d 67 SMART SM00357 3 66 4.0E-28 T 25-04-2016 IPR011129 Cold shock protein GO:0003676 SMA_RS04830 36f1d9a16e28a0e4b90a401bcd7c6564 426 PANTHER PTHR11119 10 424 5.8E-111 T 25-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 SMA_RS04830 36f1d9a16e28a0e4b90a401bcd7c6564 426 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 332 352 - T 25-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 SMA_RS04830 36f1d9a16e28a0e4b90a401bcd7c6564 426 Pfam PF00860 Permease family 10 380 4.7E-101 T 25-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 SMA_RS04830 36f1d9a16e28a0e4b90a401bcd7c6564 426 TIGRFAM TIGR03173 pbuX: xanthine permease 14 417 1.1E-149 T 25-04-2016 IPR017588 Uric acid permease UacT-like GO:0006810|GO:0016021 SMA_RS04830 36f1d9a16e28a0e4b90a401bcd7c6564 426 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 9 415 8.2E-118 T 25-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 SMA_RS05420 650aa2e82e9d1d298a241ed243afe2b1 198 SUPERFAMILY SSF116734 16 195 9.65E-22 T 25-04-2016 SMA_RS00855 b2141125680c031390a05546a85fca28 142 Gene3D G3DSA:3.40.50.510 1 140 1.3E-29 T 25-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 SMA_RS00855 b2141125680c031390a05546a85fca28 142 Pfam PF03610 PTS system fructose IIA component 4 120 2.3E-23 T 25-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 SMA_RS00855 b2141125680c031390a05546a85fca28 142 SUPERFAMILY SSF53062 1 131 9.68E-28 T 25-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 SMA_RS01945 46a1615e4675b64d48730d683e1bf371 145 SUPERFAMILY SSF82649 2 141 7.85E-49 T 25-04-2016 SMA_RS01945 46a1615e4675b64d48730d683e1bf371 145 PANTHER PTHR10093 1 141 4.1E-43 T 25-04-2016 SMA_RS01945 46a1615e4675b64d48730d683e1bf371 145 TIGRFAM TIGR01994 SUF_scaf_2: SUF system FeS assembly protein, NifU family 6 139 2.1E-54 T 25-04-2016 SMA_RS01945 46a1615e4675b64d48730d683e1bf371 145 Pfam PF01592 NifU-like N terminal domain 10 127 1.9E-26 T 25-04-2016 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 SMA_RS01945 46a1615e4675b64d48730d683e1bf371 145 Gene3D G3DSA:3.90.1010.10 9 141 5.6E-42 T 25-04-2016 SMA_RS03990 a77775820c3fee1b5dd776fa8843ae06 239 SUPERFAMILY SSF117856 7 239 1.83E-75 T 25-04-2016 SMA_RS03990 a77775820c3fee1b5dd776fa8843ae06 239 TIGRFAM TIGR01252 acetolac_decarb: alpha-acetolactate decarboxylase 6 239 1.5E-88 T 25-04-2016 IPR005128 Alpha-acetolactate decarboxylase GO:0045151|GO:0047605 KEGG: 00650+4.1.1.5|KEGG: 00660+4.1.1.5|MetaCyc: PWY-5939|UniPathway: UPA00626 SMA_RS03990 a77775820c3fee1b5dd776fa8843ae06 239 Gene3D G3DSA:3.30.1330.80 109 205 4.3E-45 T 25-04-2016 SMA_RS03990 a77775820c3fee1b5dd776fa8843ae06 239 PANTHER PTHR35524 7 239 1.4E-76 T 25-04-2016 SMA_RS03990 a77775820c3fee1b5dd776fa8843ae06 239 Pfam PF03306 Alpha-acetolactate decarboxylase 7 227 3.4E-74 T 25-04-2016 IPR005128 Alpha-acetolactate decarboxylase GO:0045151|GO:0047605 KEGG: 00650+4.1.1.5|KEGG: 00660+4.1.1.5|MetaCyc: PWY-5939|UniPathway: UPA00626 SMA_RS03990 a77775820c3fee1b5dd776fa8843ae06 239 Gene3D G3DSA:3.30.1330.80 6 108 2.4E-37 T 25-04-2016 SMA_RS03990 a77775820c3fee1b5dd776fa8843ae06 239 PIRSF PIRSF001332 1 239 4.3E-94 T 25-04-2016 IPR005128 Alpha-acetolactate decarboxylase GO:0045151|GO:0047605 KEGG: 00650+4.1.1.5|KEGG: 00660+4.1.1.5|MetaCyc: PWY-5939|UniPathway: UPA00626 SMA_RS09815 09d15ad3948d96dadd4135492440bd50 464 PANTHER PTHR11444:SF3 1 460 4.2E-236 T 25-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 SMA_RS09815 09d15ad3948d96dadd4135492440bd50 464 SUPERFAMILY SSF48557 8 460 2.67E-153 T 25-04-2016 IPR008948 L-Aspartase-like GO:0003824 SMA_RS09815 09d15ad3948d96dadd4135492440bd50 464 Gene3D G3DSA:1.10.275.10 7 111 2.6E-38 T 25-04-2016 IPR024083 Fumarase/histidase, N-terminal SMA_RS09815 09d15ad3948d96dadd4135492440bd50 464 TIGRFAM TIGR00838 argH: argininosuccinate lyase 8 460 1.6E-198 T 25-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 SMA_RS09815 09d15ad3948d96dadd4135492440bd50 464 PRINTS PR00145 Argininosuccinate lyase family signature 106 128 4.3E-67 T 25-04-2016 SMA_RS09815 09d15ad3948d96dadd4135492440bd50 464 PRINTS PR00145 Argininosuccinate lyase family signature 280 296 4.3E-67 T 25-04-2016 SMA_RS09815 09d15ad3948d96dadd4135492440bd50 464 PRINTS PR00145 Argininosuccinate lyase family signature 236 260 4.3E-67 T 25-04-2016 SMA_RS09815 09d15ad3948d96dadd4135492440bd50 464 PRINTS PR00145 Argininosuccinate lyase family signature 315 334 4.3E-67 T 25-04-2016 SMA_RS09815 09d15ad3948d96dadd4135492440bd50 464 PRINTS PR00145 Argininosuccinate lyase family signature 147 167 4.3E-67 T 25-04-2016 SMA_RS09815 09d15ad3948d96dadd4135492440bd50 464 PRINTS PR00145 Argininosuccinate lyase family signature 198 214 4.3E-67 T 25-04-2016 SMA_RS09815 09d15ad3948d96dadd4135492440bd50 464 ProSitePatterns PS00163 Fumarate lyases signature. 280 289 - T 25-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 SMA_RS09815 09d15ad3948d96dadd4135492440bd50 464 Hamap MF_00006 Argininosuccinate lyase [argH]. 7 458 43.503 T 25-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 SMA_RS09815 09d15ad3948d96dadd4135492440bd50 464 Pfam PF00206 Lyase 11 305 3.4E-77 T 25-04-2016 IPR022761 Fumarate lyase, N-terminal SMA_RS09815 09d15ad3948d96dadd4135492440bd50 464 Gene3D G3DSA:1.10.40.30 380 436 8.0E-27 T 25-04-2016 SMA_RS09815 09d15ad3948d96dadd4135492440bd50 464 Gene3D G3DSA:1.20.200.10 112 379 2.1E-106 T 25-04-2016 SMA_RS09815 09d15ad3948d96dadd4135492440bd50 464 PANTHER PTHR11444 1 460 4.2E-236 T 25-04-2016 IPR000362 Fumarate lyase family SMA_RS09815 09d15ad3948d96dadd4135492440bd50 464 Pfam PF14698 Argininosuccinate lyase C-terminal 368 435 5.6E-23 T 25-04-2016 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 SMA_RS09815 09d15ad3948d96dadd4135492440bd50 464 PRINTS PR00149 Fumarate lyase superfamily signature 236 263 8.2E-29 T 25-04-2016 IPR000362 Fumarate lyase family SMA_RS09815 09d15ad3948d96dadd4135492440bd50 464 PRINTS PR00149 Fumarate lyase superfamily signature 152 170 8.2E-29 T 25-04-2016 IPR000362 Fumarate lyase family SMA_RS09815 09d15ad3948d96dadd4135492440bd50 464 PRINTS PR00149 Fumarate lyase superfamily signature 280 296 8.2E-29 T 25-04-2016 IPR000362 Fumarate lyase family SMA_RS09815 09d15ad3948d96dadd4135492440bd50 464 PRINTS PR00149 Fumarate lyase superfamily signature 107 125 8.2E-29 T 25-04-2016 IPR000362 Fumarate lyase family SMA_RS05415 2f7ccde6ef0393d5b63bfdaf09803e7e 439 PIRSF PIRSF005850 65 439 2.6E-140 T 25-04-2016 IPR019219 Protein of unknown function DUF2130 SMA_RS05415 2f7ccde6ef0393d5b63bfdaf09803e7e 439 Pfam PF09903 Uncharacterized protein conserved in bacteria (DUF2130) 167 425 5.2E-90 T 25-04-2016 IPR019219 Protein of unknown function DUF2130 SMA_RS00475 c96751aa00995b29ce74f0a0827e10ff 128 ProSitePatterns PS01167 Ribosomal protein L17 signature. 30 52 - T 25-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS00475 c96751aa00995b29ce74f0a0827e10ff 128 TIGRFAM TIGR00059 L17: ribosomal protein bL17 3 128 8.9E-48 T 25-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS00475 c96751aa00995b29ce74f0a0827e10ff 128 SUPERFAMILY SSF64263 2 128 4.71E-44 T 25-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS00475 c96751aa00995b29ce74f0a0827e10ff 128 Pfam PF01196 Ribosomal protein L17 16 128 3.4E-40 T 25-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS00475 c96751aa00995b29ce74f0a0827e10ff 128 Gene3D G3DSA:3.90.1030.10 2 128 6.0E-50 T 25-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS00475 c96751aa00995b29ce74f0a0827e10ff 128 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 1 128 27.921 T 25-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS00475 c96751aa00995b29ce74f0a0827e10ff 128 PANTHER PTHR14413 1 67 1.3E-57 T 25-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS00475 c96751aa00995b29ce74f0a0827e10ff 128 PANTHER PTHR14413 84 128 1.3E-57 T 25-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS01325 b86d1c6cc7cbb7330640c15f06fe22ba 289 SUPERFAMILY SSF55729 34 278 7.4E-31 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMA_RS01325 b86d1c6cc7cbb7330640c15f06fe22ba 289 Pfam PF00583 Acetyltransferase (GNAT) family 54 106 1.3E-4 T 25-04-2016 IPR000182 GNAT domain GO:0008080 SMA_RS01325 b86d1c6cc7cbb7330640c15f06fe22ba 289 PANTHER PTHR23091:SF220 122 277 3.4E-26 T 25-04-2016 SMA_RS01325 b86d1c6cc7cbb7330640c15f06fe22ba 289 Pfam PF13673 Acetyltransferase (GNAT) domain 183 282 9.4E-13 T 25-04-2016 IPR000182 GNAT domain GO:0008080 SMA_RS01325 b86d1c6cc7cbb7330640c15f06fe22ba 289 PANTHER PTHR23091 122 277 3.4E-26 T 25-04-2016 SMA_RS01325 b86d1c6cc7cbb7330640c15f06fe22ba 289 Gene3D G3DSA:3.40.630.30 10 106 2.1E-8 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMA_RS01325 b86d1c6cc7cbb7330640c15f06fe22ba 289 Gene3D G3DSA:3.40.630.30 136 280 1.2E-19 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMA_RS05200 e220bbc87ed9b756fd213a56049ee557 419 Pfam PF01566 Natural resistance-associated macrophage protein 35 385 9.3E-9 T 25-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 SMA_RS08900 042b9b74f39832d7ba5b2ebdba08c842 80 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 2 58 5.3E-8 T 25-04-2016 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801|UniPathway: UPA00562 SMA_RS08900 042b9b74f39832d7ba5b2ebdba08c842 80 SUPERFAMILY SSF51316 2 79 9.42E-15 T 25-04-2016 IPR011057 Mss4-like SMA_RS08900 042b9b74f39832d7ba5b2ebdba08c842 80 Gene3D G3DSA:3.90.1590.10 2 80 1.0E-12 T 25-04-2016 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801|UniPathway: UPA00562 SMA_RS01880 749bd9a05aa8e90293a5fd897f31fbfd 340 Gene3D G3DSA:1.10.1040.10 39 326 1.0E-110 T 25-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 SMA_RS01880 749bd9a05aa8e90293a5fd897f31fbfd 340 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 184 326 9.1E-64 T 25-04-2016 IPR000506 Acetohydroxy acid isomeroreductase C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 SMA_RS01880 749bd9a05aa8e90293a5fd897f31fbfd 340 SUPERFAMILY SSF48179 184 331 9.35E-67 T 25-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 SMA_RS01880 749bd9a05aa8e90293a5fd897f31fbfd 340 Gene3D G3DSA:3.50.50.60 9 38 2.7E-4 T 25-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMA_RS01880 749bd9a05aa8e90293a5fd897f31fbfd 340 PANTHER PTHR21371 7 338 5.7E-186 T 25-04-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 SMA_RS01880 749bd9a05aa8e90293a5fd897f31fbfd 340 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 16 327 1.0E-133 T 25-04-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 SMA_RS01880 749bd9a05aa8e90293a5fd897f31fbfd 340 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 16 178 1.8E-75 T 25-04-2016 IPR013116 Acetohydroxy acid isomeroreductase, NADPH-binding domain KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 SMA_RS01880 749bd9a05aa8e90293a5fd897f31fbfd 340 Hamap MF_00435 Ketol-acid reductoisomerase [ilvC]. 3 329 43.832 T 25-04-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 SMA_RS01880 749bd9a05aa8e90293a5fd897f31fbfd 340 SUPERFAMILY SSF51735 5 183 4.93E-70 T 25-04-2016 IPR016040 NAD(P)-binding domain SMA_RS04720 08bc64e272ad48c3d2e7e5415687ebba 279 SUPERFAMILY SSF53448 4 269 4.78E-57 T 25-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SMA_RS04720 08bc64e272ad48c3d2e7e5415687ebba 279 Pfam PF01501 Glycosyl transferase family 8 6 253 3.8E-37 T 25-04-2016 IPR002495 Glycosyl transferase, family 8 GO:0016757 SMA_RS04720 08bc64e272ad48c3d2e7e5415687ebba 279 PANTHER PTHR13778 2 253 4.8E-15 T 25-04-2016 SMA_RS04720 08bc64e272ad48c3d2e7e5415687ebba 279 PANTHER PTHR13778:SF1 2 253 4.8E-15 T 25-04-2016 SMA_RS04720 08bc64e272ad48c3d2e7e5415687ebba 279 Gene3D G3DSA:3.90.550.10 4 269 6.8E-57 T 25-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SMA_RS01960 1d3b9d933b7f8c6dded43371a1d8715c 551 PANTHER PTHR30290 1 548 9.5E-130 T 25-04-2016 SMA_RS01960 1d3b9d933b7f8c6dded43371a1d8715c 551 SUPERFAMILY SSF53850 34 541 1.36E-113 T 25-04-2016 SMA_RS01960 1d3b9d933b7f8c6dded43371a1d8715c 551 Gene3D G3DSA:3.90.76.10 48 224 8.1E-46 T 25-04-2016 SMA_RS01960 1d3b9d933b7f8c6dded43371a1d8715c 551 Gene3D G3DSA:3.10.105.10 298 520 4.9E-42 T 25-04-2016 SMA_RS01960 1d3b9d933b7f8c6dded43371a1d8715c 551 PANTHER PTHR30290:SF10 1 548 9.5E-130 T 25-04-2016 SMA_RS01960 1d3b9d933b7f8c6dded43371a1d8715c 551 PIRSF PIRSF002741 4 551 2.9E-84 T 25-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 SMA_RS01960 1d3b9d933b7f8c6dded43371a1d8715c 551 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 82 469 7.1E-76 T 25-04-2016 IPR000914 Solute-binding protein family 5 domain SMA_RS00990 4cbf67ef80f99dfa8960bf6af243300b 288 PANTHER PTHR37038:SF1 3 288 1.3E-43 T 25-04-2016 SMA_RS00990 4cbf67ef80f99dfa8960bf6af243300b 288 TIGRFAM TIGR01716 RGG_Cterm: transcriptional activator, Rgg/GadR/MutR family, C-terminal domain 69 280 2.9E-53 T 25-04-2016 IPR010057 Transcription activator MutR, C-terminal SMA_RS00990 4cbf67ef80f99dfa8960bf6af243300b 288 PANTHER PTHR37038 3 288 1.3E-43 T 25-04-2016 SMA_RS00990 4cbf67ef80f99dfa8960bf6af243300b 288 SMART SM00530 8 62 8.3E-6 T 25-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SMA_RS00990 4cbf67ef80f99dfa8960bf6af243300b 288 Pfam PF01381 Helix-turn-helix 9 62 7.9E-9 T 25-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SMA_RS00990 4cbf67ef80f99dfa8960bf6af243300b 288 Gene3D G3DSA:1.10.260.40 2 70 1.2E-11 T 25-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SMA_RS00990 4cbf67ef80f99dfa8960bf6af243300b 288 SUPERFAMILY SSF47413 4 66 3.38E-13 T 25-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SMA_RS03010 48b2b763de344df7a83f83368953bc7e 90 Pfam PF11364 Protein of unknown function (DUF3165) 1 80 1.7E-35 T 25-04-2016 IPR021506 Protein of unknown function DUF3165 SMA_RS07010 e0e6a27c65b386cd4d3af136ae4d2867 274 Pfam PF06970 Replication initiator protein A (RepA) N-terminus 14 88 1.3E-29 T 25-04-2016 IPR010724 Replication initiator A, N-terminal SMA_RS01855 35de1c3886a239fb060db3c629966b23 121 PANTHER PTHR34297:SF2 1 121 3.2E-49 T 25-04-2016 SMA_RS01855 35de1c3886a239fb060db3c629966b23 121 PANTHER PTHR34297 1 121 3.2E-49 T 25-04-2016 SMA_RS01855 35de1c3886a239fb060db3c629966b23 121 Pfam PF03780 Asp23 family, cell envelope-related function 9 116 1.6E-32 T 25-04-2016 IPR005531 Alkaline shock protein Asp23 SMA_RS02355 21fe9e115f851284217b34d153ffca05 107 PANTHER PTHR41300:SF1 5 107 7.4E-16 T 25-04-2016 SMA_RS02355 21fe9e115f851284217b34d153ffca05 107 TIGRFAM TIGR02209 ftsL_broad: cell division protein FtsL 25 106 4.0E-17 T 25-04-2016 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 SMA_RS02355 21fe9e115f851284217b34d153ffca05 107 Hamap MF_00910 Cell division protein FtsL [ftsL]. 23 107 14.277 T 25-04-2016 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 SMA_RS02355 21fe9e115f851284217b34d153ffca05 107 Pfam PF04977 Septum formation initiator 33 103 1.2E-7 T 25-04-2016 IPR007060 Septum formation initiator FtsL/DivIC GO:0007049 SMA_RS02355 21fe9e115f851284217b34d153ffca05 107 PANTHER PTHR41300 5 107 7.4E-16 T 25-04-2016 SMA_RS08070 fa1cffb3f7e8f643202ae0a198c71959 219 PANTHER PTHR11911:SF104 1 133 4.9E-54 T 25-04-2016 SMA_RS08070 fa1cffb3f7e8f643202ae0a198c71959 219 SUPERFAMILY SSF55021 137 207 8.81E-6 T 25-04-2016 SMA_RS08070 fa1cffb3f7e8f643202ae0a198c71959 219 Gene3D G3DSA:3.30.70.260 141 200 6.4E-10 T 25-04-2016 SMA_RS08070 fa1cffb3f7e8f643202ae0a198c71959 219 Gene3D G3DSA:3.10.580.10 1 132 4.1E-36 T 25-04-2016 SMA_RS08070 fa1cffb3f7e8f643202ae0a198c71959 219 SMART SM00116 10 57 1.1E-12 T 25-04-2016 IPR000644 CBS domain SMA_RS08070 fa1cffb3f7e8f643202ae0a198c71959 219 SMART SM00116 84 131 1.1E-8 T 25-04-2016 IPR000644 CBS domain SMA_RS08070 fa1cffb3f7e8f643202ae0a198c71959 219 PANTHER PTHR11911 1 133 4.9E-54 T 25-04-2016 SMA_RS08070 fa1cffb3f7e8f643202ae0a198c71959 219 SUPERFAMILY SSF54631 1 131 3.54E-36 T 25-04-2016 SMA_RS08070 fa1cffb3f7e8f643202ae0a198c71959 219 Pfam PF00571 CBS domain 3 55 9.4E-17 T 25-04-2016 IPR000644 CBS domain SMA_RS08070 fa1cffb3f7e8f643202ae0a198c71959 219 Pfam PF00571 CBS domain 77 129 1.4E-12 T 25-04-2016 IPR000644 CBS domain SMA_RS04295 ef412b5a971975585fdf3c77a2aec70e 226 PANTHER PTHR24220:SF431 7 222 1.4E-84 T 25-04-2016 SMA_RS04295 ef412b5a971975585fdf3c77a2aec70e 226 Gene3D G3DSA:3.40.50.300 6 223 7.1E-63 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS04295 ef412b5a971975585fdf3c77a2aec70e 226 Pfam PF00005 ABC transporter 25 173 2.1E-34 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMA_RS04295 ef412b5a971975585fdf3c77a2aec70e 226 PANTHER PTHR24220 7 222 1.4E-84 T 25-04-2016 SMA_RS04295 ef412b5a971975585fdf3c77a2aec70e 226 SUPERFAMILY SSF52540 6 224 2.35E-60 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS04295 ef412b5a971975585fdf3c77a2aec70e 226 SMART SM00382 34 221 4.0E-16 T 25-04-2016 IPR003593 AAA+ ATPase domain SMA_RS04295 ef412b5a971975585fdf3c77a2aec70e 226 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SMA_RS08925 1c7e72e5d2fbf50167a4e7ce10d9c590 139 Gene3D G3DSA:3.40.30.10 25 106 2.4E-6 T 25-04-2016 IPR012336 Thioredoxin-like fold SMA_RS01575 4f1de2f3058f9a358d4f09c656a1a9c2 88 PANTHER PTHR34875 1 88 1.2E-31 T 25-04-2016 SMA_RS01575 4f1de2f3058f9a358d4f09c656a1a9c2 88 Hamap MF_01054 UPF0237 protein . 1 88 24.746 T 25-04-2016 IPR022986 Uncharacterised protein family UPF0237, ACT-type SMA_RS01575 4f1de2f3058f9a358d4f09c656a1a9c2 88 Pfam PF13740 ACT domain 4 75 1.5E-12 T 25-04-2016 SMA_RS01575 4f1de2f3058f9a358d4f09c656a1a9c2 88 SUPERFAMILY SSF55021 1 82 1.69E-21 T 25-04-2016 SMA_RS01575 4f1de2f3058f9a358d4f09c656a1a9c2 88 Gene3D G3DSA:3.30.70.260 1 87 7.1E-31 T 25-04-2016 SMA_RS00670 ef3e3170e08ca54a939c562b99dd1877 774 PANTHER PTHR32282 15 721 1.3E-176 T 25-04-2016 SMA_RS00670 ef3e3170e08ca54a939c562b99dd1877 774 Gene3D G3DSA:3.40.710.10 341 729 3.3E-89 T 25-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SMA_RS00670 ef3e3170e08ca54a939c562b99dd1877 774 SUPERFAMILY SSF56601 335 759 5.15E-95 T 25-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SMA_RS00670 ef3e3170e08ca54a939c562b99dd1877 774 SUPERFAMILY SSF56601 263 281 5.15E-95 T 25-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SMA_RS00670 ef3e3170e08ca54a939c562b99dd1877 774 Pfam PF00905 Penicillin binding protein transpeptidase domain 401 635 2.6E-24 T 25-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 SMA_RS00670 ef3e3170e08ca54a939c562b99dd1877 774 SUPERFAMILY SSF53955 79 303 7.59E-59 T 25-04-2016 IPR023346 Lysozyme-like domain SMA_RS00670 ef3e3170e08ca54a939c562b99dd1877 774 Gene3D G3DSA:1.10.3810.10 99 292 2.7E-58 T 25-04-2016 SMA_RS00670 ef3e3170e08ca54a939c562b99dd1877 774 PANTHER PTHR32282:SF5 15 721 1.3E-176 T 25-04-2016 SMA_RS00670 ef3e3170e08ca54a939c562b99dd1877 774 Pfam PF00912 Transglycosylase 89 275 1.9E-51 T 25-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 SMA_RS09450 fc6cb6f9870a26afb52a86a0e0ee4210 69 SUPERFAMILY SSF69047 1 63 3.92E-11 T 25-04-2016 IPR008462 CsbD-like SMA_RS09450 fc6cb6f9870a26afb52a86a0e0ee4210 69 Pfam PF05532 CsbD-like 5 55 4.7E-14 T 25-04-2016 IPR008462 CsbD-like SMA_RS09450 fc6cb6f9870a26afb52a86a0e0ee4210 69 Gene3D G3DSA:1.10.1470.10 1 66 7.6E-17 T 25-04-2016 IPR008462 CsbD-like SMA_RS08365 bf9421a18785f14ac1d600e9f536b5c4 92 Pfam PF00708 Acylphosphatase 1 90 1.4E-22 T 25-04-2016 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 SMA_RS08365 bf9421a18785f14ac1d600e9f536b5c4 92 ProSitePatterns PS00150 Acylphosphatase signature 1. 8 18 - T 25-04-2016 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 SMA_RS08365 bf9421a18785f14ac1d600e9f536b5c4 92 Gene3D G3DSA:3.30.70.100 1 90 2.2E-25 T 25-04-2016 SMA_RS08365 bf9421a18785f14ac1d600e9f536b5c4 92 SUPERFAMILY SSF54975 1 90 1.02E-21 T 25-04-2016 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 SMA_RS08365 bf9421a18785f14ac1d600e9f536b5c4 92 PANTHER PTHR10029 1 90 1.2E-16 T 25-04-2016 SMA_RS06310 4bfe817c12216cf6240f55878f3b522d 388 Pfam PF01264 Chorismate synthase 1 363 1.7E-116 T 25-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 SMA_RS06310 4bfe817c12216cf6240f55878f3b522d 388 PANTHER PTHR21085:SF0 1 388 1.0E-182 T 25-04-2016 SMA_RS06310 4bfe817c12216cf6240f55878f3b522d 388 TIGRFAM TIGR00033 aroC: chorismate synthase 1 368 1.1E-141 T 25-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 SMA_RS06310 4bfe817c12216cf6240f55878f3b522d 388 Hamap MF_00300 Chorismate synthase [aroC]. 1 370 35.037 T 25-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 SMA_RS06310 4bfe817c12216cf6240f55878f3b522d 388 PIRSF PIRSF001456 1 380 9.4E-123 T 25-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 SMA_RS06310 4bfe817c12216cf6240f55878f3b522d 388 ProSitePatterns PS00787 Chorismate synthase signature 1. 7 22 - T 25-04-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 SMA_RS06310 4bfe817c12216cf6240f55878f3b522d 388 Gene3D G3DSA:3.60.150.10 1 387 3.4E-148 T 25-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 SMA_RS06310 4bfe817c12216cf6240f55878f3b522d 388 SUPERFAMILY SSF103263 1 387 9.16E-148 T 25-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 SMA_RS06310 4bfe817c12216cf6240f55878f3b522d 388 ProSitePatterns PS00788 Chorismate synthase signature 2. 129 145 - T 25-04-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 SMA_RS06310 4bfe817c12216cf6240f55878f3b522d 388 PANTHER PTHR21085 1 388 1.0E-182 T 25-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 SMA_RS06310 4bfe817c12216cf6240f55878f3b522d 388 ProSitePatterns PS00789 Chorismate synthase signature 3. 337 353 - T 25-04-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 SMA_RS06855 898732b981d81da5ca57d0e697edf209 161 SUPERFAMILY SSF52833 45 159 1.81E-19 T 25-04-2016 IPR012336 Thioredoxin-like fold SMA_RS06855 898732b981d81da5ca57d0e697edf209 161 Gene3D G3DSA:3.40.30.10 42 159 2.6E-28 T 25-04-2016 IPR012336 Thioredoxin-like fold SMA_RS06855 898732b981d81da5ca57d0e697edf209 161 Pfam PF00085 Thioredoxin 69 159 2.4E-7 T 25-04-2016 IPR013766 Thioredoxin domain GO:0045454 SMA_RS09005 bb47e0a0ce5110f72df6a96de82b6db7 145 PANTHER PTHR13355:SF8 16 145 4.4E-32 T 25-04-2016 SMA_RS09005 bb47e0a0ce5110f72df6a96de82b6db7 145 Pfam PF13673 Acetyltransferase (GNAT) domain 45 145 1.1E-24 T 25-04-2016 IPR000182 GNAT domain GO:0008080 SMA_RS09005 bb47e0a0ce5110f72df6a96de82b6db7 145 PANTHER PTHR13355 16 145 4.4E-32 T 25-04-2016 SMA_RS09005 bb47e0a0ce5110f72df6a96de82b6db7 145 SUPERFAMILY SSF55729 7 145 1.93E-37 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMA_RS09005 bb47e0a0ce5110f72df6a96de82b6db7 145 Gene3D G3DSA:3.40.630.30 2 143 1.1E-40 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMA_RS01915 85ab51ee0e6644aedacdd9acf63aea4f 279 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 4 273 16.65 T 25-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 SMA_RS01915 85ab51ee0e6644aedacdd9acf63aea4f 279 Pfam PF02673 Bacitracin resistance protein BacA 9 267 7.9E-76 T 25-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 SMA_RS01915 85ab51ee0e6644aedacdd9acf63aea4f 279 PANTHER PTHR30622:SF5 2 279 1.5E-126 T 25-04-2016 SMA_RS01915 85ab51ee0e6644aedacdd9acf63aea4f 279 PANTHER PTHR30622 2 279 1.5E-126 T 25-04-2016 SMA_RS10145 3835b587a9d696ab305792f5a512af0c 132 Gene3D G3DSA:3.40.30.10 1 114 2.2E-31 T 25-04-2016 IPR012336 Thioredoxin-like fold SMA_RS10145 3835b587a9d696ab305792f5a512af0c 132 Pfam PF03960 ArsC family 6 113 4.6E-20 T 25-04-2016 IPR006660 Arsenate reductase-like SMA_RS10145 3835b587a9d696ab305792f5a512af0c 132 SUPERFAMILY SSF52833 1 124 4.91E-34 T 25-04-2016 IPR012336 Thioredoxin-like fold SMA_RS10145 3835b587a9d696ab305792f5a512af0c 132 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 2 114 3.8E-34 T 25-04-2016 IPR006504 Transcriptional regulator Spx/MgsR SMA_RS10145 3835b587a9d696ab305792f5a512af0c 132 PANTHER PTHR30041 1 130 1.3E-66 T 25-04-2016 SMA_RS10145 3835b587a9d696ab305792f5a512af0c 132 PANTHER PTHR30041:SF5 1 130 1.3E-66 T 25-04-2016 SMA_RS10095 3c71c4b6ebce7ed3a62cd8ee021ab30d 242 PANTHER PTHR10357 1 111 2.4E-77 T 25-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 SMA_RS10095 3c71c4b6ebce7ed3a62cd8ee021ab30d 242 PANTHER PTHR10357 141 240 2.4E-77 T 25-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 SMA_RS10095 3c71c4b6ebce7ed3a62cd8ee021ab30d 242 Pfam PF16657 Maltogenic Amylase, C-terminal domain 165 233 9.5E-9 T 25-04-2016 IPR032091 Maltogenic Amylase, C-terminal SMA_RS10095 3c71c4b6ebce7ed3a62cd8ee021ab30d 242 PANTHER PTHR10357:SF170 1 111 2.4E-77 T 25-04-2016 SMA_RS10095 3c71c4b6ebce7ed3a62cd8ee021ab30d 242 PANTHER PTHR10357:SF170 141 240 2.4E-77 T 25-04-2016 SMA_RS10095 3c71c4b6ebce7ed3a62cd8ee021ab30d 242 SUPERFAMILY SSF51011 165 237 1.49E-15 T 25-04-2016 SMA_RS10095 3c71c4b6ebce7ed3a62cd8ee021ab30d 242 Gene3D G3DSA:2.60.40.1180 166 238 7.3E-19 T 25-04-2016 IPR013780 Glycosyl hydrolase, all-beta SMA_RS10095 3c71c4b6ebce7ed3a62cd8ee021ab30d 242 Gene3D G3DSA:3.20.20.80 4 163 4.3E-39 T 25-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 SMA_RS10095 3c71c4b6ebce7ed3a62cd8ee021ab30d 242 Pfam PF00128 Alpha amylase, catalytic domain 4 64 1.1E-13 T 25-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 SMA_RS10095 3c71c4b6ebce7ed3a62cd8ee021ab30d 242 SUPERFAMILY SSF51445 6 162 1.57E-37 T 25-04-2016 IPR017853 Glycoside hydrolase superfamily SMA_RS05070 0a46cf6e6335276e2098e05d2806d1a8 659 PANTHER PTHR30489 9 456 2.4E-45 T 25-04-2016 SMA_RS05070 0a46cf6e6335276e2098e05d2806d1a8 659 PANTHER PTHR30489 473 659 2.4E-45 T 25-04-2016 SMA_RS05070 0a46cf6e6335276e2098e05d2806d1a8 659 PIRSF PIRSF018968 1 658 9.0E-65 T 25-04-2016 IPR027022 ABC transporter permease protein, BceB-type GO:0006810 SMA_RS05070 0a46cf6e6335276e2098e05d2806d1a8 659 Pfam PF02687 FtsX-like permease family 58 176 1.2E-8 T 25-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 SMA_RS05070 0a46cf6e6335276e2098e05d2806d1a8 659 PANTHER PTHR30489:SF14 9 456 2.4E-45 T 25-04-2016 SMA_RS05070 0a46cf6e6335276e2098e05d2806d1a8 659 PANTHER PTHR30489:SF14 473 659 2.4E-45 T 25-04-2016 SMA_RS07985 dc66bd099c0a93520f3e1d5af8ccb05a 276 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 5 252 2.4E-20 T 25-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase SMA_RS07985 dc66bd099c0a93520f3e1d5af8ccb05a 276 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 37 46 - T 25-04-2016 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 SMA_RS07985 dc66bd099c0a93520f3e1d5af8ccb05a 276 Gene3D G3DSA:3.60.10.10 1 275 2.1E-74 T 25-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase SMA_RS07985 dc66bd099c0a93520f3e1d5af8ccb05a 276 ProSitePatterns PS00728 AP endonucleases family 1 signature 3. 235 246 - T 25-04-2016 IPR020848 AP endonuclease 1, conserved site GO:0003677|GO:0004519|GO:0005622|GO:0006281 SMA_RS07985 dc66bd099c0a93520f3e1d5af8ccb05a 276 SUPERFAMILY SSF56219 1 276 1.31E-56 T 25-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase SMA_RS07985 dc66bd099c0a93520f3e1d5af8ccb05a 276 PANTHER PTHR22748 1 276 2.3E-86 T 25-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 SMA_RS07985 dc66bd099c0a93520f3e1d5af8ccb05a 276 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 275 1.2E-81 T 25-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 SMA_RS07985 dc66bd099c0a93520f3e1d5af8ccb05a 276 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 274 7.6E-56 T 25-04-2016 SMA_RS03170 c9d402a31186b27f24e95ed2a53f7799 552 Pfam PF02463 RecF/RecN/SMC N terminal domain 2 508 3.1E-16 T 25-04-2016 IPR003395 RecF/RecN/SMC, N-terminal SMA_RS03170 c9d402a31186b27f24e95ed2a53f7799 552 PANTHER PTHR11059 2 551 2.4E-168 T 25-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 SMA_RS03170 c9d402a31186b27f24e95ed2a53f7799 552 Gene3D G3DSA:3.40.50.300 1 208 7.5E-66 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS03170 c9d402a31186b27f24e95ed2a53f7799 552 PIRSF PIRSF003128 1 552 2.1E-174 T 25-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 SMA_RS03170 c9d402a31186b27f24e95ed2a53f7799 552 SUPERFAMILY SSF52540 292 506 3.07E-31 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS03170 c9d402a31186b27f24e95ed2a53f7799 552 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 552 1.6E-169 T 25-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 SMA_RS03170 c9d402a31186b27f24e95ed2a53f7799 552 SUPERFAMILY SSF52540 1 219 1.06E-62 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS03170 c9d402a31186b27f24e95ed2a53f7799 552 Gene3D G3DSA:3.40.50.300 430 506 2.0E-7 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS03170 c9d402a31186b27f24e95ed2a53f7799 552 Gene3D G3DSA:3.40.50.300 376 382 2.0E-7 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS03170 c9d402a31186b27f24e95ed2a53f7799 552 SUPERFAMILY SSF52540 2 50 3.07E-31 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS04670 b98ce6c7dd468ad2af38bd93193db122 209 Gene3D G3DSA:3.40.50.300 1 204 3.0E-68 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS04670 b98ce6c7dd468ad2af38bd93193db122 209 PANTHER PTHR24220 3 204 6.2E-84 T 25-04-2016 SMA_RS04670 b98ce6c7dd468ad2af38bd93193db122 209 Pfam PF00005 ABC transporter 18 162 1.1E-30 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMA_RS04670 b98ce6c7dd468ad2af38bd93193db122 209 SUPERFAMILY SSF52540 1 207 3.99E-63 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS04670 b98ce6c7dd468ad2af38bd93193db122 209 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SMA_RS04670 b98ce6c7dd468ad2af38bd93193db122 209 SMART SM00382 26 209 1.9E-11 T 25-04-2016 IPR003593 AAA+ ATPase domain SMA_RS02040 e01318494b7cfa0e75c3584704cea9be 74 Gene3D G3DSA:1.10.1200.10 3 72 1.4E-20 T 25-04-2016 IPR009081 Phosphopantetheine binding ACP domain SMA_RS02040 e01318494b7cfa0e75c3584704cea9be 74 Hamap MF_01217 Acyl carrier protein [acpP]. 2 73 17.749 T 25-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 SMA_RS02040 e01318494b7cfa0e75c3584704cea9be 74 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 32 72 3.0E-15 T 25-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 SMA_RS02040 e01318494b7cfa0e75c3584704cea9be 74 Pfam PF00550 Phosphopantetheine attachment site 5 69 2.2E-14 T 25-04-2016 IPR009081 Phosphopantetheine binding ACP domain SMA_RS02040 e01318494b7cfa0e75c3584704cea9be 74 SUPERFAMILY SSF47336 3 72 9.16E-17 T 25-04-2016 IPR009081 Phosphopantetheine binding ACP domain SMA_RS09595 228900540c42252a3a9f0daab4be7b3e 96 Pfam PF01527 Transposase 7 74 7.0E-15 T 25-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 SMA_RS09595 228900540c42252a3a9f0daab4be7b3e 96 PANTHER PTHR33215 1 93 6.0E-19 T 25-04-2016 SMA_RS09595 228900540c42252a3a9f0daab4be7b3e 96 Gene3D G3DSA:1.10.10.60 10 88 4.2E-17 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMA_RS09595 228900540c42252a3a9f0daab4be7b3e 96 SUPERFAMILY SSF46689 7 93 1.02E-18 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMA_RS06950 80a6fb807dcd54a214562a0ba70cc2ba 934 SUPERFAMILY SSF51261 464 547 1.74E-5 T 25-04-2016 IPR011055 Duplicated hybrid motif SMA_RS06950 80a6fb807dcd54a214562a0ba70cc2ba 934 Pfam PF05257 CHAP domain 809 908 7.8E-14 T 25-04-2016 IPR007921 CHAP domain SMA_RS06950 80a6fb807dcd54a214562a0ba70cc2ba 934 SUPERFAMILY SSF54001 805 915 3.83E-14 T 25-04-2016 SMA_RS06950 80a6fb807dcd54a214562a0ba70cc2ba 934 Gene3D G3DSA:2.70.70.10 436 577 4.3E-7 T 25-04-2016 SMA_RS03290 a753574e445ef34d1efd0306c720c458 253 Gene3D G3DSA:3.40.50.150 34 246 4.8E-70 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMA_RS03290 a753574e445ef34d1efd0306c720c458 253 Pfam PF05175 Methyltransferase small domain 21 174 9.5E-13 T 25-04-2016 IPR007848 Methyltransferase small domain GO:0008168 SMA_RS03290 a753574e445ef34d1efd0306c720c458 253 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 120 126 - T 25-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 SMA_RS03290 a753574e445ef34d1efd0306c720c458 253 PANTHER PTHR18895:SF75 10 242 1.8E-95 T 25-04-2016 SMA_RS03290 a753574e445ef34d1efd0306c720c458 253 SUPERFAMILY SSF53335 16 200 1.92E-30 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMA_RS03290 a753574e445ef34d1efd0306c720c458 253 PANTHER PTHR18895 10 242 1.8E-95 T 25-04-2016 SMA_RS06420 6cb5e65324db8f9c47de2b42b6b4fde5 817 Pfam PF00884 Sulfatase 474 757 3.7E-32 T 25-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 SMA_RS06420 6cb5e65324db8f9c47de2b42b6b4fde5 817 SUPERFAMILY SSF53649 580 708 8.83E-6 T 25-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 SMA_RS01570 5491764a8a4fec9b53364a0eac5cc77b 160 SUPERFAMILY SSF88946 3 83 1.28E-5 T 25-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMA_RS08505 d5206fa6fd271763a2b0202c334bc297 276 Pfam PF02361 Cobalt transport protein 19 235 8.3E-29 T 25-04-2016 IPR003339 ABC/ECF transporter, transmembrane component SMA_RS08505 d5206fa6fd271763a2b0202c334bc297 276 PANTHER PTHR33514:SF1 6 265 4.3E-101 T 25-04-2016 SMA_RS08505 d5206fa6fd271763a2b0202c334bc297 276 PANTHER PTHR33514 6 265 4.3E-101 T 25-04-2016 SMA_RS03705 90fc51025e8d84bd11e54466b6251a13 309 PIRSF PIRSF035875 1 301 1.9E-60 T 25-04-2016 IPR017039 Virulence factor BrkB SMA_RS03705 90fc51025e8d84bd11e54466b6251a13 309 PANTHER PTHR30213 30 299 3.5E-31 T 25-04-2016 SMA_RS03705 90fc51025e8d84bd11e54466b6251a13 309 Pfam PF03631 Virulence factor BrkB 30 282 2.8E-45 T 25-04-2016 IPR017039 Virulence factor BrkB SMA_RS00700 22e0a7df5f688c10b31b7265fe3a4192 97 SUPERFAMILY SSF54523 16 92 5.57E-13 T 25-04-2016 SMA_RS00700 22e0a7df5f688c10b31b7265fe3a4192 97 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 14 34 - T 25-04-2016 IPR012902 Prokaryotic N-terminal methylation site SMA_RS00700 22e0a7df5f688c10b31b7265fe3a4192 97 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 13 34 7.8E-8 T 25-04-2016 IPR012902 Prokaryotic N-terminal methylation site SMA_RS00700 22e0a7df5f688c10b31b7265fe3a4192 97 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 14 34 4.4E-7 T 25-04-2016 IPR012902 Prokaryotic N-terminal methylation site SMA_RS00700 22e0a7df5f688c10b31b7265fe3a4192 97 PIRSF PIRSF029928 1 97 1.2E-38 T 25-04-2016 IPR016940 ComG operon protein C GO:0030420 SMA_RS00700 22e0a7df5f688c10b31b7265fe3a4192 97 PRINTS PR00813 Bacterial general secretion pathway protein G signature 51 69 7.1E-10 T 25-04-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 SMA_RS00700 22e0a7df5f688c10b31b7265fe3a4192 97 PRINTS PR00813 Bacterial general secretion pathway protein G signature 15 40 7.1E-10 T 25-04-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 SMA_RS09685 abec01487fe7abbf4d36f51032b0b14f 688 Gene3D G3DSA:3.40.50.300 350 555 7.1E-62 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS09685 abec01487fe7abbf4d36f51032b0b14f 688 Gene3D G3DSA:3.40.50.300 90 207 7.1E-62 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS09685 abec01487fe7abbf4d36f51032b0b14f 688 SUPERFAMILY SSF52540 105 554 5.49E-44 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS09685 abec01487fe7abbf4d36f51032b0b14f 688 Pfam PF02534 Type IV secretory system Conjugative DNA transfer 128 549 1.4E-61 T 25-04-2016 IPR003688 Type IV secretion system protein TraG/VirD4 GO:0009291|GO:0016020 SMA_RS01535 d091f7634bcfcf862f25676ec53bbada 112 Pfam PF01022 Bacterial regulatory protein, arsR family 43 87 1.7E-11 T 25-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SMA_RS01535 d091f7634bcfcf862f25676ec53bbada 112 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 36 51 2.3E-13 T 25-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SMA_RS01535 d091f7634bcfcf862f25676ec53bbada 112 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 56 67 2.3E-13 T 25-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SMA_RS01535 d091f7634bcfcf862f25676ec53bbada 112 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 84 99 2.3E-13 T 25-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SMA_RS01535 d091f7634bcfcf862f25676ec53bbada 112 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 69 84 2.3E-13 T 25-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SMA_RS01535 d091f7634bcfcf862f25676ec53bbada 112 Gene3D G3DSA:1.10.10.10 4 111 2.3E-26 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMA_RS01535 d091f7634bcfcf862f25676ec53bbada 112 SUPERFAMILY SSF46785 19 111 3.42E-19 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMA_RS01535 d091f7634bcfcf862f25676ec53bbada 112 ProSitePatterns PS00846 Bacterial regulatory proteins, arsR family signature. 58 76 - T 25-04-2016 IPR018334 ArsR-type transcription regulator, HTH motif GO:0003700|GO:0005622|GO:0006355 SMA_RS01535 d091f7634bcfcf862f25676ec53bbada 112 SMART SM00418 34 112 1.8E-13 T 25-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SMA_RS01535 d091f7634bcfcf862f25676ec53bbada 112 PANTHER PTHR33154 45 111 1.3E-13 T 25-04-2016 SMA_RS09020 2523b3656d444dd4eb906c8b91270363 248 Pfam PF14506 CppA N-terminal 9 130 4.9E-48 T 25-04-2016 IPR032702 CppA, N-terminal SMA_RS09020 2523b3656d444dd4eb906c8b91270363 248 SUPERFAMILY SSF54593 8 174 8.21E-10 T 25-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SMA_RS09020 2523b3656d444dd4eb906c8b91270363 248 Gene3D G3DSA:3.10.180.40 65 190 2.0E-43 T 25-04-2016 SMA_RS09020 2523b3656d444dd4eb906c8b91270363 248 Pfam PF14507 CppA C-terminal 144 246 1.2E-37 T 25-04-2016 IPR032703 CppA, C-terminal SMA_RS09020 2523b3656d444dd4eb906c8b91270363 248 Gene3D G3DSA:3.10.180.10 1 64 9.5E-39 T 25-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SMA_RS09020 2523b3656d444dd4eb906c8b91270363 248 Gene3D G3DSA:3.10.180.10 191 248 9.5E-39 T 25-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SMA_RS00345 3c56df2f6f233a5e9468b950200fa7eb 207 SUPERFAMILY SSF52166 1 206 7.85E-79 T 25-04-2016 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 SMA_RS00345 3c56df2f6f233a5e9468b950200fa7eb 207 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 9 207 36.28 T 25-04-2016 IPR013005 50S ribosomal protein uL4 SMA_RS00345 3c56df2f6f233a5e9468b950200fa7eb 207 Gene3D G3DSA:3.40.1370.10 58 207 1.1E-60 T 25-04-2016 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 SMA_RS00345 3c56df2f6f233a5e9468b950200fa7eb 207 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 17 204 9.3E-78 T 25-04-2016 IPR013005 50S ribosomal protein uL4 SMA_RS00345 3c56df2f6f233a5e9468b950200fa7eb 207 Pfam PF00573 Ribosomal protein L4/L1 family 17 204 1.7E-66 T 25-04-2016 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 SMA_RS00345 3c56df2f6f233a5e9468b950200fa7eb 207 PANTHER PTHR10746 1 206 2.4E-90 T 25-04-2016 IPR013005 50S ribosomal protein uL4 SMA_RS10455 6b2e3c282405b04e253fa577a4ecf80a 278 PANTHER PTHR33545:SF6 16 278 1.3E-64 T 25-04-2016 SMA_RS10455 6b2e3c282405b04e253fa577a4ecf80a 278 PIRSF PIRSF006483 1 277 8.0E-75 T 25-04-2016 IPR003740 Uncharacterised membrane protein YitT SMA_RS10455 6b2e3c282405b04e253fa577a4ecf80a 278 PANTHER PTHR33545 16 278 1.3E-64 T 25-04-2016 SMA_RS10455 6b2e3c282405b04e253fa577a4ecf80a 278 Pfam PF10035 Uncharacterized protein conserved in bacteria (DUF2179) 215 269 1.8E-19 T 25-04-2016 IPR019264 Domain of unknown function DUF2179 SMA_RS10455 6b2e3c282405b04e253fa577a4ecf80a 278 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 9 208 8.4E-51 T 25-04-2016 IPR003740 Uncharacterised membrane protein YitT SMA_RS00860 8eadd6d1c78ba00a633722ad34c534f8 164 Gene3D G3DSA:3.40.35.10 1 163 1.2E-43 T 25-04-2016 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 SMA_RS00860 8eadd6d1c78ba00a633722ad34c534f8 164 SUPERFAMILY SSF52728 1 163 3.92E-41 T 25-04-2016 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 SMA_RS00860 8eadd6d1c78ba00a633722ad34c534f8 164 Pfam PF03830 PTS system sorbose subfamily IIB component 3 149 8.8E-38 T 25-04-2016 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 SMA_RS00860 8eadd6d1c78ba00a633722ad34c534f8 164 PANTHER PTHR33799 1 149 3.0E-18 T 25-04-2016 SMA_RS06345 112d69904c1ae6a3cadd527ea5765a92 715 Pfam PF00884 Sulfatase 254 558 7.1E-33 T 25-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 SMA_RS06345 112d69904c1ae6a3cadd527ea5765a92 715 PIRSF PIRSF005091 1 648 1.5E-177 T 25-04-2016 IPR012160 Lipoteichoic acid synthase-like KEGG: 00440+2.7.8.-|KEGG: 00513+2.7.8.-|KEGG: 00540+2.7.8.-|KEGG: 00564+2.7.8.-|KEGG: 00600+2.7.8.-|KEGG: 00770+2.7.8.-|UniPathway: UPA00556 SMA_RS06345 112d69904c1ae6a3cadd527ea5765a92 715 Gene3D G3DSA:3.40.720.10 254 571 1.8E-38 T 25-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 SMA_RS06345 112d69904c1ae6a3cadd527ea5765a92 715 PANTHER PTHR10342:SF214 632 656 8.1E-105 T 25-04-2016 SMA_RS06345 112d69904c1ae6a3cadd527ea5765a92 715 PANTHER PTHR10342:SF214 226 586 8.1E-105 T 25-04-2016 SMA_RS06345 112d69904c1ae6a3cadd527ea5765a92 715 PANTHER PTHR10342 226 586 8.1E-105 T 25-04-2016 SMA_RS06345 112d69904c1ae6a3cadd527ea5765a92 715 SUPERFAMILY SSF53649 252 659 3.92E-71 T 25-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 SMA_RS06345 112d69904c1ae6a3cadd527ea5765a92 715 PANTHER PTHR10342 632 656 8.1E-105 T 25-04-2016 SMA_RS02795 0ffe4704871a0fd60e871640f73a72b4 358 PANTHER PTHR35145 41 232 3.7E-41 T 25-04-2016 SMA_RS02795 0ffe4704871a0fd60e871640f73a72b4 358 SUPERFAMILY SSF142906 105 232 1.19E-28 T 25-04-2016 SMA_RS02795 0ffe4704871a0fd60e871640f73a72b4 358 Pfam PF04237 YjbR 121 226 1.4E-10 T 25-04-2016 IPR007351 Uncharacterised protein YjbR SMA_RS02795 0ffe4704871a0fd60e871640f73a72b4 358 PANTHER PTHR35145:SF1 41 232 3.7E-41 T 25-04-2016 SMA_RS00055 7a3e49d66b3e0698cd1bbb15a8c19f7b 428 Gene3D G3DSA:2.30.30.170 132 187 4.5E-6 T 25-04-2016 SMA_RS00055 7a3e49d66b3e0698cd1bbb15a8c19f7b 428 Pfam PF13354 Beta-lactamase enzyme family 213 406 2.7E-29 T 25-04-2016 SMA_RS00055 7a3e49d66b3e0698cd1bbb15a8c19f7b 428 SUPERFAMILY SSF56601 74 426 1.71E-31 T 25-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SMA_RS00055 7a3e49d66b3e0698cd1bbb15a8c19f7b 428 Gene3D G3DSA:3.40.710.10 188 427 3.5E-44 T 25-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SMA_RS10315 139d65e95743070f8722dba5d930ef7a 892 PANTHER PTHR30294:SF25 3 244 2.6E-77 T 25-04-2016 SMA_RS10315 139d65e95743070f8722dba5d930ef7a 892 PANTHER PTHR30294:SF25 704 885 2.6E-77 T 25-04-2016 SMA_RS10315 139d65e95743070f8722dba5d930ef7a 892 Pfam PF12698 ABC-2 family transporter protein 17 195 2.5E-10 T 25-04-2016 SMA_RS10315 139d65e95743070f8722dba5d930ef7a 892 SUPERFAMILY SSF101967 183 327 1.44E-6 T 25-04-2016 SMA_RS10315 139d65e95743070f8722dba5d930ef7a 892 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 316 342 4.6E-6 T 25-04-2016 IPR023908 xxxLxxG heptad repeat SMA_RS10315 139d65e95743070f8722dba5d930ef7a 892 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 545 572 3.3E-4 T 25-04-2016 IPR023908 xxxLxxG heptad repeat SMA_RS10315 139d65e95743070f8722dba5d930ef7a 892 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 197 224 8.1E-5 T 25-04-2016 IPR023908 xxxLxxG heptad repeat SMA_RS10315 139d65e95743070f8722dba5d930ef7a 892 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 623 649 2.4E-6 T 25-04-2016 IPR023908 xxxLxxG heptad repeat SMA_RS10315 139d65e95743070f8722dba5d930ef7a 892 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 220 245 1.8E-4 T 25-04-2016 IPR023908 xxxLxxG heptad repeat SMA_RS10315 139d65e95743070f8722dba5d930ef7a 892 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 253 278 1.8E-4 T 25-04-2016 IPR023908 xxxLxxG heptad repeat SMA_RS10315 139d65e95743070f8722dba5d930ef7a 892 TIGRFAM TIGR03062 pip_yhgE_Cterm: YhgE/Pip C-terminal domain 688 888 1.2E-61 T 25-04-2016 IPR017501 Phage infection protein, YhgE, C-terminal SMA_RS10315 139d65e95743070f8722dba5d930ef7a 892 TIGRFAM TIGR03061 pip_yhgE_Nterm: YhgE/Pip N-terminal domain 4 166 1.2E-61 T 25-04-2016 IPR017500 Phage infection protein, YhgE, N-terminal SMA_RS10315 139d65e95743070f8722dba5d930ef7a 892 PANTHER PTHR30294 3 244 2.6E-77 T 25-04-2016 SMA_RS10315 139d65e95743070f8722dba5d930ef7a 892 PANTHER PTHR30294 704 885 2.6E-77 T 25-04-2016 SMA_RS00360 0e626640b55ead65d5a65bcf781031d5 92 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 25-04-2016 IPR020934 Ribosomal protein S19 conserved site GO:0003723 SMA_RS00360 0e626640b55ead65d5a65bcf781031d5 92 PIRSF PIRSF002144 1 92 3.8E-32 T 25-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 SMA_RS00360 0e626640b55ead65d5a65bcf781031d5 92 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 25.494 T 25-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 SMA_RS00360 0e626640b55ead65d5a65bcf781031d5 92 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 92 2.1E-47 T 25-04-2016 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 SMA_RS00360 0e626640b55ead65d5a65bcf781031d5 92 Gene3D G3DSA:3.30.860.10 1 92 1.1E-41 T 25-04-2016 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 SMA_RS00360 0e626640b55ead65d5a65bcf781031d5 92 Pfam PF00203 Ribosomal protein S19 3 83 1.2E-37 T 25-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 SMA_RS00360 0e626640b55ead65d5a65bcf781031d5 92 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 2.0E-23 T 25-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 SMA_RS00360 0e626640b55ead65d5a65bcf781031d5 92 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 2.0E-23 T 25-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 SMA_RS00360 0e626640b55ead65d5a65bcf781031d5 92 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 2.0E-23 T 25-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 SMA_RS00360 0e626640b55ead65d5a65bcf781031d5 92 SUPERFAMILY SSF54570 3 84 6.02E-35 T 25-04-2016 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 SMA_RS00360 0e626640b55ead65d5a65bcf781031d5 92 PANTHER PTHR11880 1 91 1.8E-54 T 25-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 SMA_RS01620 af6c053a62fd22563ec3562b9b758c4e 249 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 5 242 2.3E-63 T 25-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 SMA_RS01620 af6c053a62fd22563ec3562b9b758c4e 249 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 2 247 35.273 T 25-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 SMA_RS01620 af6c053a62fd22563ec3562b9b758c4e 249 PANTHER PTHR11142:SF0 1 249 2.3E-90 T 25-04-2016 SMA_RS01620 af6c053a62fd22563ec3562b9b758c4e 249 Pfam PF01416 tRNA pseudouridine synthase 6 105 4.2E-11 T 25-04-2016 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 SMA_RS01620 af6c053a62fd22563ec3562b9b758c4e 249 Pfam PF01416 tRNA pseudouridine synthase 144 248 3.1E-29 T 25-04-2016 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 SMA_RS01620 af6c053a62fd22563ec3562b9b758c4e 249 Gene3D G3DSA:3.30.70.580 1 105 1.1E-35 T 25-04-2016 IPR020094 Pseudouridine synthase I, TruA, N-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 SMA_RS01620 af6c053a62fd22563ec3562b9b758c4e 249 Gene3D G3DSA:3.30.70.660 108 248 1.7E-45 T 25-04-2016 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 SMA_RS01620 af6c053a62fd22563ec3562b9b758c4e 249 PIRSF PIRSF001430 1 249 1.0E-77 T 25-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 SMA_RS01620 af6c053a62fd22563ec3562b9b758c4e 249 PANTHER PTHR11142 1 249 2.3E-90 T 25-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 SMA_RS01620 af6c053a62fd22563ec3562b9b758c4e 249 SUPERFAMILY SSF55120 1 248 7.91E-81 T 25-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 SMA_RS04435 636bf3569556a4192162a7403ef8840e 368 Gene3D G3DSA:3.40.50.2000 191 338 3.6E-19 T 25-04-2016 SMA_RS04435 636bf3569556a4192162a7403ef8840e 368 PANTHER PTHR12526 98 363 2.2E-35 T 25-04-2016 SMA_RS04435 636bf3569556a4192162a7403ef8840e 368 Pfam PF00534 Glycosyl transferases group 1 189 334 7.6E-26 T 25-04-2016 IPR001296 Glycosyl transferase, family 1 SMA_RS04435 636bf3569556a4192162a7403ef8840e 368 SUPERFAMILY SSF53756 136 363 2.34E-47 T 25-04-2016 SMA_RS09025 4229adc01e816b67ac23144c48b29bf3 418 PANTHER PTHR33498:SF1 1 414 6.6E-111 T 25-04-2016 SMA_RS09025 4229adc01e816b67ac23144c48b29bf3 418 Pfam PF01610 Transposase 154 400 6.0E-50 T 25-04-2016 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain SMA_RS09025 4229adc01e816b67ac23144c48b29bf3 418 PANTHER PTHR33498 1 414 6.6E-111 T 25-04-2016 SMA_RS09025 4229adc01e816b67ac23144c48b29bf3 418 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 39 85 2.2E-11 T 25-04-2016 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger SMA_RS09025 4229adc01e816b67ac23144c48b29bf3 418 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 92 140 1.8E-7 T 25-04-2016 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain SMA_RS07060 130cde74985f55476ccf5dee40a11491 1130 Hamap MF_01480 CRISPR-associated endonuclease Cas9 [cas9]. 3 1115 20.344 T 25-04-2016 IPR028629 CRISPR-associated endonuclease Cas9 GO:0004519 SMA_RS07060 130cde74985f55476ccf5dee40a11491 1130 Pfam PF13395 HNH endonuclease 576 631 4.8E-22 T 25-04-2016 IPR003615 HNH nuclease SMA_RS07060 130cde74985f55476ccf5dee40a11491 1130 TIGRFAM TIGR01865 cas_Csn1: CRISPR subtype II RNA-guided endonuclease Cas9 6 775 1.8E-181 T 25-04-2016 IPR028629 CRISPR-associated endonuclease Cas9 GO:0004519 SMA_RS04950 dc001a13477041935d8572114bd041fb 203 Pfam PF01719 Plasmid replication protein 3 185 4.2E-66 T 25-04-2016 IPR002631 Plasmid replication protein GO:0003677|GO:0003916|GO:0005727|GO:0006260 SMA_RS08815 dc54a57462477140783239011bcc5b7f 353 PANTHER PTHR10804 1 352 9.0E-91 T 25-04-2016 SMA_RS08815 dc54a57462477140783239011bcc5b7f 353 Pfam PF01321 Creatinase/Prolidase N-terminal domain 4 127 5.2E-25 T 25-04-2016 IPR000587 Creatinase, N-terminal GO:0016787 SMA_RS08815 dc54a57462477140783239011bcc5b7f 353 Pfam PF00557 Metallopeptidase family M24 135 337 2.5E-61 T 25-04-2016 IPR000994 Peptidase M24, structural domain SMA_RS08815 dc54a57462477140783239011bcc5b7f 353 SUPERFAMILY SSF53092 1 126 7.46E-28 T 25-04-2016 IPR028980 Creatinase/Aminopeptidase P, N-terminal SMA_RS08815 dc54a57462477140783239011bcc5b7f 353 Gene3D G3DSA:3.40.350.10 2 125 3.3E-29 T 25-04-2016 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal SMA_RS08815 dc54a57462477140783239011bcc5b7f 353 PANTHER PTHR10804:SF86 1 352 9.0E-91 T 25-04-2016 SMA_RS08815 dc54a57462477140783239011bcc5b7f 353 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 284 296 - T 25-04-2016 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site SMA_RS08815 dc54a57462477140783239011bcc5b7f 353 Gene3D G3DSA:3.90.230.10 126 351 4.8E-82 T 25-04-2016 IPR000994 Peptidase M24, structural domain SMA_RS08815 dc54a57462477140783239011bcc5b7f 353 SUPERFAMILY SSF55920 96 348 3.93E-77 T 25-04-2016 IPR000994 Peptidase M24, structural domain SMA_RS04550 1da8141b96a1d80303bb10638d4f063f 126 PANTHER PTHR33931:SF2 1 113 1.0E-28 T 25-04-2016 SMA_RS04550 1da8141b96a1d80303bb10638d4f063f 126 Pfam PF03788 LrgA family 15 107 1.3E-29 T 25-04-2016 IPR005538 LrgA/CidA family GO:0016021 SMA_RS04550 1da8141b96a1d80303bb10638d4f063f 126 PANTHER PTHR33931 1 113 1.0E-28 T 25-04-2016 SMA_RS06765 745f190c9b61715e0682dee764410407 51 Pfam PF04604 Type-A lantibiotic 1 50 4.1E-25 T 25-04-2016 IPR007682 Lantibiotic, type A, Lactobacillales-type GO:0005576|GO:0042742 SMA_RS06760 745f190c9b61715e0682dee764410407 51 Pfam PF04604 Type-A lantibiotic 1 50 4.1E-25 T 25-04-2016 IPR007682 Lantibiotic, type A, Lactobacillales-type GO:0005576|GO:0042742 SMA_RS01890 e473201e643300b28d1144330fb21c58 294 PANTHER PTHR10264:SF84 1 291 6.9E-141 T 25-04-2016 SMA_RS01890 e473201e643300b28d1144330fb21c58 294 SUPERFAMILY SSF117892 55 185 2.09E-25 T 25-04-2016 IPR001107 Band 7 domain SMA_RS01890 e473201e643300b28d1144330fb21c58 294 SMART SM00244 19 179 4.6E-29 T 25-04-2016 IPR001107 Band 7 domain SMA_RS01890 e473201e643300b28d1144330fb21c58 294 PANTHER PTHR10264 1 291 6.9E-141 T 25-04-2016 IPR001972 Stomatin family GO:0016020 SMA_RS01890 e473201e643300b28d1144330fb21c58 294 Pfam PF01145 SPFH domain / Band 7 family 23 195 9.6E-27 T 25-04-2016 IPR001107 Band 7 domain SMA_RS07945 104f6d73737093bed38c8e9bdcf204ee 277 SUPERFAMILY SSF158560 8 101 7.72E-13 T 25-04-2016 SMA_RS03860 7abed13072ff62aecf151be855a9a7d2 309 Hamap MF_01818 Ribonuclease BN [rbn]. 1 309 38.541 T 25-04-2016 IPR013471 Ribonuclease Z/BN GO:0016891|GO:0042779 SMA_RS03860 7abed13072ff62aecf151be855a9a7d2 309 PANTHER PTHR12553 1 156 8.1E-82 T 25-04-2016 SMA_RS03860 7abed13072ff62aecf151be855a9a7d2 309 PANTHER PTHR12553 187 279 8.1E-82 T 25-04-2016 SMA_RS03860 7abed13072ff62aecf151be855a9a7d2 309 SUPERFAMILY SSF56281 1 309 1.48E-76 T 25-04-2016 IPR001279 Metallo-beta-lactamase SMA_RS03860 7abed13072ff62aecf151be855a9a7d2 309 Gene3D G3DSA:3.60.15.10 3 309 2.0E-79 T 25-04-2016 IPR001279 Metallo-beta-lactamase SMA_RS03860 7abed13072ff62aecf151be855a9a7d2 309 Pfam PF00753 Metallo-beta-lactamase superfamily 31 93 5.2E-10 T 25-04-2016 IPR001279 Metallo-beta-lactamase SMA_RS03860 7abed13072ff62aecf151be855a9a7d2 309 TIGRFAM TIGR02651 RNase_Z: ribonuclease Z 2 308 2.5E-105 T 25-04-2016 IPR013471 Ribonuclease Z/BN GO:0016891|GO:0042779 SMA_RS01805 d26bd2da7855bf5bb7894f228ccdbd4d 164 Pfam PF13508 Acetyltransferase (GNAT) domain 49 135 1.0E-6 T 25-04-2016 IPR000182 GNAT domain GO:0008080 SMA_RS01805 d26bd2da7855bf5bb7894f228ccdbd4d 164 SUPERFAMILY SSF55729 13 139 1.35E-12 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMA_RS01805 d26bd2da7855bf5bb7894f228ccdbd4d 164 Gene3D G3DSA:3.40.630.30 12 140 1.3E-26 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMA_RS00725 809eff3b11e62bc0ad7a2e7595388a04 318 Pfam PF02384 N-6 DNA Methylase 72 299 1.1E-7 T 25-04-2016 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 SMA_RS00725 809eff3b11e62bc0ad7a2e7595388a04 318 PANTHER PTHR41313 2 317 4.5E-101 T 25-04-2016 SMA_RS00725 809eff3b11e62bc0ad7a2e7595388a04 318 PIRSF PIRSF026567 1 317 5.4E-108 T 25-04-2016 IPR016843 S-adenosyl-L-methionine dependent adenine methyltransferase, bacteria, predicted SMA_RS00725 809eff3b11e62bc0ad7a2e7595388a04 318 Gene3D G3DSA:3.40.50.150 97 305 6.6E-23 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMA_RS00725 809eff3b11e62bc0ad7a2e7595388a04 318 SUPERFAMILY SSF53335 52 302 1.34E-35 T 25-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMA_RS08895 ec95ba4ae2bdac0071d5598565a6635f 384 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 20 285 8.9E-96 T 25-04-2016 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 SMA_RS08895 ec95ba4ae2bdac0071d5598565a6635f 384 Gene3D G3DSA:1.10.340.30 34 135 1.6E-45 T 25-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 SMA_RS08895 ec95ba4ae2bdac0071d5598565a6635f 384 SUPERFAMILY SSF55811 233 380 4.3E-22 T 25-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SMA_RS08895 ec95ba4ae2bdac0071d5598565a6635f 384 Gene3D G3DSA:1.10.1670.10 136 236 7.9E-33 T 25-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal SMA_RS08895 ec95ba4ae2bdac0071d5598565a6635f 384 SUPERFAMILY SSF48150 17 235 3.3E-73 T 25-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 SMA_RS08895 ec95ba4ae2bdac0071d5598565a6635f 384 SMART SM00478 52 203 1.8E-50 T 25-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 SMA_RS08895 ec95ba4ae2bdac0071d5598565a6635f 384 Pfam PF00633 Helix-hairpin-helix motif 113 141 3.1E-8 T 25-04-2016 IPR000445 Helix-hairpin-helix motif GO:0003677 SMA_RS08895 ec95ba4ae2bdac0071d5598565a6635f 384 PANTHER PTHR10359 9 298 3.0E-97 T 25-04-2016 SMA_RS08895 ec95ba4ae2bdac0071d5598565a6635f 384 PANTHER PTHR10359 314 359 3.0E-97 T 25-04-2016 SMA_RS08895 ec95ba4ae2bdac0071d5598565a6635f 384 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 48 176 7.4E-19 T 25-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 SMA_RS08895 ec95ba4ae2bdac0071d5598565a6635f 384 Pfam PF14815 NUDIX domain 248 377 1.9E-17 T 25-04-2016 IPR029119 MutY, C-terminal SMA_RS08895 ec95ba4ae2bdac0071d5598565a6635f 384 Gene3D G3DSA:3.90.79.10 243 381 2.1E-28 T 25-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SMA_RS05050 16949c9e473244ed4d385fd0c7a3c68a 356 SUPERFAMILY SSF56349 185 353 6.77E-34 T 25-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 SMA_RS05050 16949c9e473244ed4d385fd0c7a3c68a 356 Gene3D G3DSA:1.10.150.130 30 123 3.5E-12 T 25-04-2016 IPR023109 Integrase/recombinase, N-terminal SMA_RS05050 16949c9e473244ed4d385fd0c7a3c68a 356 Pfam PF00589 Phage integrase family 191 344 2.9E-25 T 25-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 SMA_RS05050 16949c9e473244ed4d385fd0c7a3c68a 356 PANTHER PTHR30349 188 355 1.3E-102 T 25-04-2016 SMA_RS05050 16949c9e473244ed4d385fd0c7a3c68a 356 PANTHER PTHR30349 11 159 1.3E-102 T 25-04-2016 SMA_RS05050 16949c9e473244ed4d385fd0c7a3c68a 356 PANTHER PTHR30349:SF17 188 355 1.3E-102 T 25-04-2016 SMA_RS05050 16949c9e473244ed4d385fd0c7a3c68a 356 PANTHER PTHR30349:SF17 11 159 1.3E-102 T 25-04-2016 SMA_RS05050 16949c9e473244ed4d385fd0c7a3c68a 356 Hamap MF_01816 Tyrosine recombinase XerS [xerS]. 1 356 58.288 T 25-04-2016 IPR023670 Tyrosine recombinase XerS GO:0006310|GO:0007049|GO:0007059|GO:0015074|GO:0051301 SMA_RS05050 16949c9e473244ed4d385fd0c7a3c68a 356 Pfam PF13495 Phage integrase, N-terminal SAM-like domain 33 122 8.7E-7 T 25-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 SMA_RS05050 16949c9e473244ed4d385fd0c7a3c68a 356 Gene3D G3DSA:1.10.443.10 185 353 1.5E-38 T 25-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 SMA_RS05445 9b52341b81f5038f9233b0fc8f3eda11 256 Pfam PF04199 Putative cyclase 17 181 2.3E-30 T 25-04-2016 IPR007325 Kynurenine formamidase GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|UniPathway: UPA00333 SMA_RS05445 9b52341b81f5038f9233b0fc8f3eda11 256 PANTHER PTHR31118 15 256 3.3E-59 T 25-04-2016 SMA_RS05445 9b52341b81f5038f9233b0fc8f3eda11 256 Gene3D G3DSA:3.50.30.50 14 244 3.7E-60 T 25-04-2016 SMA_RS05445 9b52341b81f5038f9233b0fc8f3eda11 256 SUPERFAMILY SSF102198 14 243 9.02E-55 T 25-04-2016 SMA_RS05445 9b52341b81f5038f9233b0fc8f3eda11 256 PANTHER PTHR31118:SF9 15 256 3.3E-59 T 25-04-2016 SMA_RS06295 0fb5fbd82745fc013adc5194e3ae58b5 305 PANTHER PTHR11540 2 297 8.1E-76 T 25-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 SMA_RS06295 0fb5fbd82745fc013adc5194e3ae58b5 305 PIRSF PIRSF000102 1 305 4.4E-83 T 25-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 SMA_RS06295 0fb5fbd82745fc013adc5194e3ae58b5 305 ProSitePatterns PS00064 L-lactate dehydrogenase active site. 175 181 - T 25-04-2016 IPR018177 L-lactate dehydrogenase, active site GO:0004459|GO:0055114 KEGG: 00010+1.1.1.27|KEGG: 00270+1.1.1.27|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-6901|UniPathway: UPA00554 SMA_RS06295 0fb5fbd82745fc013adc5194e3ae58b5 305 SUPERFAMILY SSF51735 2 147 3.45E-39 T 25-04-2016 IPR016040 NAD(P)-binding domain SMA_RS06295 0fb5fbd82745fc013adc5194e3ae58b5 305 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 4 145 6.1E-23 T 25-04-2016 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 SMA_RS06295 0fb5fbd82745fc013adc5194e3ae58b5 305 PANTHER PTHR11540:SF3 2 297 8.1E-76 T 25-04-2016 SMA_RS06295 0fb5fbd82745fc013adc5194e3ae58b5 305 Gene3D G3DSA:3.40.50.720 3 148 4.8E-41 T 25-04-2016 IPR016040 NAD(P)-binding domain SMA_RS06295 0fb5fbd82745fc013adc5194e3ae58b5 305 SUPERFAMILY SSF56327 146 299 2.16E-41 T 25-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 SMA_RS06295 0fb5fbd82745fc013adc5194e3ae58b5 305 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 148 301 1.1E-13 T 25-04-2016 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 SMA_RS06295 0fb5fbd82745fc013adc5194e3ae58b5 305 PRINTS PR00086 L-lactate dehydrogenase signature 143 161 9.7E-30 T 25-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 SMA_RS06295 0fb5fbd82745fc013adc5194e3ae58b5 305 PRINTS PR00086 L-lactate dehydrogenase signature 173 186 9.7E-30 T 25-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 SMA_RS06295 0fb5fbd82745fc013adc5194e3ae58b5 305 PRINTS PR00086 L-lactate dehydrogenase signature 29 53 9.7E-30 T 25-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 SMA_RS06295 0fb5fbd82745fc013adc5194e3ae58b5 305 PRINTS PR00086 L-lactate dehydrogenase signature 119 139 9.7E-30 T 25-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 SMA_RS06295 0fb5fbd82745fc013adc5194e3ae58b5 305 PRINTS PR00086 L-lactate dehydrogenase signature 4 28 9.7E-30 T 25-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 SMA_RS06295 0fb5fbd82745fc013adc5194e3ae58b5 305 Gene3D G3DSA:3.90.110.10 150 301 1.5E-46 T 25-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 SMA_RS03870 6aa6de8bbb007f489d38ca98af5c9195 735 PANTHER PTHR30255 2 728 1.1E-281 T 25-04-2016 SMA_RS03870 6aa6de8bbb007f489d38ca98af5c9195 735 PANTHER PTHR30255:SF2 2 728 1.1E-281 T 25-04-2016 SMA_RS03870 6aa6de8bbb007f489d38ca98af5c9195 735 SUPERFAMILY SSF64182 58 437 2.22E-118 T 25-04-2016 SMA_RS03870 6aa6de8bbb007f489d38ca98af5c9195 735 Pfam PF02272 DHHA1 domain 370 431 3.0E-11 T 25-04-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7 SMA_RS03870 6aa6de8bbb007f489d38ca98af5c9195 735 Pfam PF10141 Single-strand DNA-specific exonuclease, C terminal domain 583 730 1.6E-37 T 25-04-2016 IPR018779 Single-stranded-DNA-specific exonuclease RecJ, C-terminal SMA_RS03870 6aa6de8bbb007f489d38ca98af5c9195 735 Pfam PF01368 DHH family 84 228 3.1E-14 T 25-04-2016 IPR001667 DDH domain SMA_RS03870 6aa6de8bbb007f489d38ca98af5c9195 735 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 29 556 1.7E-180 T 25-04-2016 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 SMA_RS06745 5c2b6ac639ee2a2470863c0f1f000fa8 302 Gene3D G3DSA:3.40.50.300 2 223 9.0E-63 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS06745 5c2b6ac639ee2a2470863c0f1f000fa8 302 PANTHER PTHR24220 6 227 3.8E-91 T 25-04-2016 SMA_RS06745 5c2b6ac639ee2a2470863c0f1f000fa8 302 SMART SM00382 29 210 7.9E-14 T 25-04-2016 IPR003593 AAA+ ATPase domain SMA_RS06745 5c2b6ac639ee2a2470863c0f1f000fa8 302 SUPERFAMILY SSF52540 3 223 7.4E-57 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS06745 5c2b6ac639ee2a2470863c0f1f000fa8 302 Pfam PF00005 ABC transporter 25 161 3.1E-29 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMA_RS06745 5c2b6ac639ee2a2470863c0f1f000fa8 302 PANTHER PTHR24220:SF523 6 227 3.8E-91 T 25-04-2016 SMA_RS09705 81472029176d552c498df33b9781cc27 128 Gene3D G3DSA:2.40.50.140 1 107 3.0E-27 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMA_RS09705 81472029176d552c498df33b9781cc27 128 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 1 109 5.4E-21 T 25-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 SMA_RS09705 81472029176d552c498df33b9781cc27 128 Pfam PF00436 Single-strand binding protein family 2 98 2.3E-22 T 25-04-2016 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 SMA_RS09705 81472029176d552c498df33b9781cc27 128 PANTHER PTHR10302 1 97 5.6E-15 T 25-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 SMA_RS09705 81472029176d552c498df33b9781cc27 128 SUPERFAMILY SSF50249 1 107 3.64E-26 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMA_RS04490 345c80c3979476aaba96740d747cb32f 240 Gene3D G3DSA:3.40.50.880 21 207 6.6E-16 T 25-04-2016 IPR029062 Class I glutamine amidotransferase-like SMA_RS04490 345c80c3979476aaba96740d747cb32f 240 SUPERFAMILY SSF52317 51 218 3.2E-10 T 25-04-2016 IPR029062 Class I glutamine amidotransferase-like SMA_RS04490 345c80c3979476aaba96740d747cb32f 240 Pfam PF03575 Peptidase family S51 50 204 6.3E-11 T 25-04-2016 IPR005320 Peptidase S51 GO:0006508|GO:0008236 SMA_RS02465 631ba3d1ad856b3d53cc8e6fae3d1720 161 Pfam PF02664 S-Ribosylhomocysteinase (LuxS) 8 152 3.4E-53 T 25-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 SMA_RS02465 631ba3d1ad856b3d53cc8e6fae3d1720 161 Hamap MF_00091 S-ribosylhomocysteine lyase [luxS]. 5 159 34.794 T 25-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 SMA_RS02465 631ba3d1ad856b3d53cc8e6fae3d1720 161 ProDom PD013172 LYASE SYNTHESIS LUXS AUTOINDUCER-2 PRODUCTION AUTOINDUCER S-RIBOSYLHOMOCYSTEINE AI-2 QUORUM SENSING 12 147 1.0E-72 T 25-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 SMA_RS02465 631ba3d1ad856b3d53cc8e6fae3d1720 161 PANTHER PTHR35799 6 161 8.6E-84 T 25-04-2016 SMA_RS02465 631ba3d1ad856b3d53cc8e6fae3d1720 161 Gene3D G3DSA:3.30.1360.80 7 160 1.5E-65 T 25-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 SMA_RS02465 631ba3d1ad856b3d53cc8e6fae3d1720 161 SUPERFAMILY SSF63411 8 160 7.97E-61 T 25-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 SMA_RS02465 631ba3d1ad856b3d53cc8e6fae3d1720 161 PIRSF PIRSF006160 5 161 2.8E-63 T 25-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 SMA_RS02465 631ba3d1ad856b3d53cc8e6fae3d1720 161 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 32 50 2.9E-31 T 25-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 SMA_RS02465 631ba3d1ad856b3d53cc8e6fae3d1720 161 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 121 140 2.9E-31 T 25-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 SMA_RS02465 631ba3d1ad856b3d53cc8e6fae3d1720 161 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 77 95 2.9E-31 T 25-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 SMA_RS02465 631ba3d1ad856b3d53cc8e6fae3d1720 161 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 53 71 2.9E-31 T 25-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 SMA_RS02465 631ba3d1ad856b3d53cc8e6fae3d1720 161 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 9 27 2.9E-31 T 25-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 SMA_RS01590 bb12f518573eb246e74055182bb871c3 257 Gene3D G3DSA:3.30.1380.10 73 185 1.6E-7 T 25-04-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain SMA_RS01590 bb12f518573eb246e74055182bb871c3 257 PANTHER PTHR34385 72 257 5.7E-35 T 25-04-2016 SMA_RS01590 bb12f518573eb246e74055182bb871c3 257 PANTHER PTHR34385:SF1 72 257 5.7E-35 T 25-04-2016 SMA_RS01590 bb12f518573eb246e74055182bb871c3 257 SUPERFAMILY SSF55166 90 240 6.54E-27 T 25-04-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain SMA_RS01590 bb12f518573eb246e74055182bb871c3 257 Pfam PF02557 D-alanyl-D-alanine carboxypeptidase 97 231 2.8E-36 T 25-04-2016 IPR003709 Peptidase M15B GO:0006508|GO:0008233 SMA_RS06380 8dad62eeabdc1549ab546b89f9656ba6 162 ProDom PD091538 PORE-FORMING FORMING PORE PEPTIDE EBSA PEPTIDE GBS1458 SMU.692 SAG1388 7 134 5.0E-44 T 25-04-2016 IPR020215 Pore-forming protein, EbsA SMA_RS06280 c0ab97fa5118dfca25ea428323ffb219 381 SUPERFAMILY SSF53383 1 376 2.39E-92 T 25-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SMA_RS06280 c0ab97fa5118dfca25ea428323ffb219 381 Gene3D G3DSA:3.40.640.10 14 246 9.7E-78 T 25-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SMA_RS06280 c0ab97fa5118dfca25ea428323ffb219 381 PANTHER PTHR11601:SF50 1 381 1.1E-189 T 25-04-2016 SMA_RS06280 c0ab97fa5118dfca25ea428323ffb219 381 Gene3D G3DSA:3.90.1150.10 247 372 2.5E-29 T 25-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SMA_RS06280 c0ab97fa5118dfca25ea428323ffb219 381 Pfam PF00266 Aminotransferase class-V 2 366 3.5E-67 T 25-04-2016 IPR000192 Aminotransferase class V domain SMA_RS06280 c0ab97fa5118dfca25ea428323ffb219 381 PANTHER PTHR11601 1 381 1.1E-189 T 25-04-2016 SMA_RS06280 c0ab97fa5118dfca25ea428323ffb219 381 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 193 212 - T 25-04-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site SMA_RS06280 c0ab97fa5118dfca25ea428323ffb219 381 PIRSF PIRSF005572 1 381 2.4E-113 T 25-04-2016 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 SMA_RS05015 23c5832653a70ddc55568d2447e9adb9 96 PANTHER PTHR22604:SF116 2 91 3.8E-20 T 25-04-2016 SMA_RS05015 23c5832653a70ddc55568d2447e9adb9 96 PANTHER PTHR22604 2 91 3.8E-20 T 25-04-2016 SMA_RS05020 636952d838181e07372264bbc914b84f 85 PANTHER PTHR38039 1 85 2.5E-24 T 25-04-2016 SMA_RS05020 636952d838181e07372264bbc914b84f 85 SUPERFAMILY SSF143011 1 84 9.16E-23 T 25-04-2016 SMA_RS05020 636952d838181e07372264bbc914b84f 85 PANTHER PTHR38039:SF1 1 85 2.5E-24 T 25-04-2016 SMA_RS05020 636952d838181e07372264bbc914b84f 85 TIGRFAM TIGR02116 toxin_Txe_YoeB: addiction module toxin, Txe/YoeB family 5 85 2.3E-32 T 25-04-2016 IPR009614 Toxin YoeB GO:0004519|GO:0006401 SMA_RS05020 636952d838181e07372264bbc914b84f 85 Pfam PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system 5 85 1.2E-32 T 25-04-2016 IPR009614 Toxin YoeB GO:0004519|GO:0006401 SMA_RS09715 75f9683b5d112e7885f16a8de046eaef 887 SUPERFAMILY SSF51261 392 480 4.29E-5 T 25-04-2016 IPR011055 Duplicated hybrid motif SMA_RS09715 75f9683b5d112e7885f16a8de046eaef 887 Pfam PF05257 CHAP domain 769 863 6.2E-13 T 25-04-2016 IPR007921 CHAP domain SMA_RS09715 75f9683b5d112e7885f16a8de046eaef 887 Gene3D G3DSA:2.70.70.10 392 481 1.4E-8 T 25-04-2016 SMA_RS09715 75f9683b5d112e7885f16a8de046eaef 887 SUPERFAMILY SSF54001 764 870 2.26E-12 T 25-04-2016 SMA_RS09715 75f9683b5d112e7885f16a8de046eaef 887 Pfam PF01551 Peptidase family M23 412 481 2.0E-7 T 25-04-2016 IPR016047 Peptidase M23 SMA_RS03260 e809d8cb42618cbf6fecfc163329b20e 186 TIGRFAM TIGR04518 ECF_S_folT_fam: ECF transporter S component, folate family 9 175 1.5E-30 T 25-04-2016 IPR030949 ECF transporter S component, folate family SMA_RS03260 e809d8cb42618cbf6fecfc163329b20e 186 Pfam PF07155 ECF-type riboflavin transporter, S component 9 175 2.3E-11 T 25-04-2016 IPR009825 ECF transporter, substrate-specific component-like GO:0016020 SMA_RS00020 34cc33e16455c34a7494cc9901d70a05 64 Pfam PF06107 Bacterial protein of unknown function (DUF951) 2 63 9.9E-28 T 25-04-2016 IPR009296 Protein of unknown function DUF951 SMA_RS00020 34cc33e16455c34a7494cc9901d70a05 64 PANTHER PTHR38455 1 63 1.2E-25 T 25-04-2016 SMA_RS00020 34cc33e16455c34a7494cc9901d70a05 64 PANTHER PTHR38455:SF1 1 63 1.2E-25 T 25-04-2016 SMA_RS00020 34cc33e16455c34a7494cc9901d70a05 64 PIRSF PIRSF037263 1 64 4.0E-31 T 25-04-2016 IPR009296 Protein of unknown function DUF951 SMA_RS09650 6382b081169700a05c7600b25b876858 542 Pfam PF03432 Relaxase/Mobilisation nuclease domain 81 284 3.2E-50 T 25-04-2016 IPR005094 Endonuclease relaxase, MobA/VirD2 SMA_RS03395 bd16ed78b19f1e01f8417726cb475fb9 392 Pfam PF00155 Aminotransferase class I and II 32 384 6.3E-61 T 25-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 SMA_RS03395 bd16ed78b19f1e01f8417726cb475fb9 392 SUPERFAMILY SSF53383 5 387 6.4E-95 T 25-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SMA_RS03395 bd16ed78b19f1e01f8417726cb475fb9 392 PANTHER PTHR11751:SF391 14 389 5.9E-177 T 25-04-2016 SMA_RS03395 bd16ed78b19f1e01f8417726cb475fb9 392 Gene3D G3DSA:3.90.1150.10 259 387 4.0E-36 T 25-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SMA_RS03395 bd16ed78b19f1e01f8417726cb475fb9 392 PANTHER PTHR11751 14 389 5.9E-177 T 25-04-2016 SMA_RS03395 bd16ed78b19f1e01f8417726cb475fb9 392 Gene3D G3DSA:3.40.640.10 47 258 1.0E-52 T 25-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SMA_RS01500 0633e49eb8b443bd5414c60dabb7b73f 95 PANTHER PTHR33215 1 95 2.0E-16 T 25-04-2016 SMA_RS01500 0633e49eb8b443bd5414c60dabb7b73f 95 SUPERFAMILY SSF46689 1 93 9.5E-18 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMA_RS01500 0633e49eb8b443bd5414c60dabb7b73f 95 Pfam PF01527 Transposase 2 80 2.7E-11 T 25-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 SMA_RS01500 0633e49eb8b443bd5414c60dabb7b73f 95 Gene3D G3DSA:1.10.10.60 8 89 2.4E-16 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMA_RS04635 110ef321950f0e9f0f1e34de29da60b5 556 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SMA_RS04635 110ef321950f0e9f0f1e34de29da60b5 556 ProSitePatterns PS00211 ABC transporters family signature. 428 442 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SMA_RS04635 110ef321950f0e9f0f1e34de29da60b5 556 Gene3D G3DSA:3.40.50.300 289 524 3.6E-68 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS04635 110ef321950f0e9f0f1e34de29da60b5 556 PANTHER PTHR24220 285 416 5.1E-190 T 25-04-2016 SMA_RS04635 110ef321950f0e9f0f1e34de29da60b5 556 PANTHER PTHR24220 6 250 5.1E-190 T 25-04-2016 SMA_RS04635 110ef321950f0e9f0f1e34de29da60b5 556 PANTHER PTHR24220:SF588 285 416 5.1E-190 T 25-04-2016 SMA_RS04635 110ef321950f0e9f0f1e34de29da60b5 556 PANTHER PTHR24220:SF588 6 250 5.1E-190 T 25-04-2016 SMA_RS04635 110ef321950f0e9f0f1e34de29da60b5 556 Pfam PF12558 ATP-binding cassette cobalt transporter 236 303 3.5E-12 T 25-04-2016 IPR022216 ABC cobalt transporter GO:0016820 KEGG: 00920+3.6.3.- SMA_RS04635 110ef321950f0e9f0f1e34de29da60b5 556 SUPERFAMILY SSF52540 3 236 1.1E-50 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS04635 110ef321950f0e9f0f1e34de29da60b5 556 Gene3D G3DSA:3.40.50.300 2 236 3.2E-58 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS04635 110ef321950f0e9f0f1e34de29da60b5 556 SUPERFAMILY SSF52540 290 521 1.52E-62 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS04635 110ef321950f0e9f0f1e34de29da60b5 556 Pfam PF00005 ABC transporter 311 456 4.1E-31 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMA_RS04635 110ef321950f0e9f0f1e34de29da60b5 556 Pfam PF00005 ABC transporter 22 172 2.5E-21 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMA_RS04635 110ef321950f0e9f0f1e34de29da60b5 556 SMART SM00382 320 504 4.5E-13 T 25-04-2016 IPR003593 AAA+ ATPase domain SMA_RS04635 110ef321950f0e9f0f1e34de29da60b5 556 SMART SM00382 31 254 3.1E-8 T 25-04-2016 IPR003593 AAA+ ATPase domain SMA_RS03515 56bb1040fded865461b7ccbb85783bdc 325 PANTHER PTHR30135:SF3 1 325 1.5E-127 T 25-04-2016 SMA_RS03515 56bb1040fded865461b7ccbb85783bdc 325 Pfam PF01933 Uncharacterised protein family UPF0052 6 297 3.9E-92 T 25-04-2016 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 SMA_RS03515 56bb1040fded865461b7ccbb85783bdc 325 PANTHER PTHR30135 1 325 1.5E-127 T 25-04-2016 SMA_RS03515 56bb1040fded865461b7ccbb85783bdc 325 Gene3D G3DSA:3.40.50.10680 76 321 2.3E-53 T 25-04-2016 SMA_RS03515 56bb1040fded865461b7ccbb85783bdc 325 TIGRFAM TIGR01826 CofD_related: conserved hypothetical protein 6 320 3.0E-118 T 25-04-2016 IPR010119 Gluconeogenesis factor SMA_RS03515 56bb1040fded865461b7ccbb85783bdc 325 Hamap MF_00973 Gluconeogenesis factor. 2 322 34.011 T 25-04-2016 IPR010119 Gluconeogenesis factor SMA_RS03515 56bb1040fded865461b7ccbb85783bdc 325 SUPERFAMILY SSF142338 3 317 2.22E-97 T 25-04-2016 SMA_RS04745 c5c46431460ee936d5ad11cfbb7336d7 323 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 11 316 1.9E-102 T 25-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 SMA_RS04745 c5c46431460ee936d5ad11cfbb7336d7 323 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 11 126 7.3E-47 T 25-04-2016 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 SMA_RS04745 c5c46431460ee936d5ad11cfbb7336d7 323 Gene3D G3DSA:3.40.50.2020 5 166 4.6E-72 T 25-04-2016 IPR029057 Phosphoribosyltransferase-like SMA_RS04745 c5c46431460ee936d5ad11cfbb7336d7 323 Hamap MF_00583_B Ribose-phosphate pyrophosphokinase [prs]. 10 317 44.123 T 25-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 SMA_RS04745 c5c46431460ee936d5ad11cfbb7336d7 323 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 134 149 - T 25-04-2016 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: REACT_474|UniPathway: UPA00087 SMA_RS04745 c5c46431460ee936d5ad11cfbb7336d7 323 SUPERFAMILY SSF53271 11 163 5.87E-53 T 25-04-2016 IPR029057 Phosphoribosyltransferase-like SMA_RS04745 c5c46431460ee936d5ad11cfbb7336d7 323 PANTHER PTHR10210:SF41 1 322 8.4E-155 T 25-04-2016 SMA_RS04745 c5c46431460ee936d5ad11cfbb7336d7 323 Gene3D G3DSA:3.40.50.2020 167 286 1.6E-38 T 25-04-2016 IPR029057 Phosphoribosyltransferase-like SMA_RS04745 c5c46431460ee936d5ad11cfbb7336d7 323 SUPERFAMILY SSF53271 112 308 2.02E-42 T 25-04-2016 IPR029057 Phosphoribosyltransferase-like SMA_RS04745 c5c46431460ee936d5ad11cfbb7336d7 323 SMART SM01400 10 126 1.0E-73 T 25-04-2016 SMA_RS04745 c5c46431460ee936d5ad11cfbb7336d7 323 Pfam PF14572 Phosphoribosyl synthetase-associated domain 212 316 6.4E-23 T 25-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 SMA_RS04745 c5c46431460ee936d5ad11cfbb7336d7 323 PANTHER PTHR10210 1 322 8.4E-155 T 25-04-2016 SMA_RS05535 6459db60d02ac77d05d1078e64f55f03 523 Gene3D G3DSA:3.90.1200.10 221 314 1.3E-9 T 25-04-2016 SMA_RS05535 6459db60d02ac77d05d1078e64f55f03 523 SUPERFAMILY SSF56112 176 300 1.78E-29 T 25-04-2016 IPR011009 Protein kinase-like domain SMA_RS05535 6459db60d02ac77d05d1078e64f55f03 523 SUPERFAMILY SSF56112 74 137 1.78E-29 T 25-04-2016 IPR011009 Protein kinase-like domain SMA_RS05535 6459db60d02ac77d05d1078e64f55f03 523 PANTHER PTHR10566 4 519 3.1E-122 T 25-04-2016 SMA_RS05535 6459db60d02ac77d05d1078e64f55f03 523 PANTHER PTHR10566:SF10 4 519 3.1E-122 T 25-04-2016 SMA_RS05535 6459db60d02ac77d05d1078e64f55f03 523 Gene3D G3DSA:3.90.1200.10 60 97 7.2E-4 T 25-04-2016 SMA_RS05535 6459db60d02ac77d05d1078e64f55f03 523 Pfam PF03109 ABC1 family 92 207 9.0E-28 T 25-04-2016 IPR004147 UbiB domain SMA_RS03295 30e8dfbb1102881aac7165dba673dbd1 248 PANTHER PTHR10434:SF21 2 216 1.2E-61 T 25-04-2016 SMA_RS03295 30e8dfbb1102881aac7165dba673dbd1 248 PANTHER PTHR10434 2 216 1.2E-61 T 25-04-2016 SMA_RS03295 30e8dfbb1102881aac7165dba673dbd1 248 SUPERFAMILY SSF69593 2 215 1.96E-57 T 25-04-2016 SMA_RS03295 30e8dfbb1102881aac7165dba673dbd1 248 SMART SM00563 36 146 1.4E-27 T 25-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 SMA_RS03295 30e8dfbb1102881aac7165dba673dbd1 248 Gene3D G3DSA:3.40.1130.10 4 197 1.7E-20 T 25-04-2016 SMA_RS03295 30e8dfbb1102881aac7165dba673dbd1 248 Pfam PF01553 Acyltransferase 23 143 6.4E-20 T 25-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 SMA_RS07185 0c24e68b86be1014f3d1036d8829fce1 239 PANTHER PTHR21235:SF15 1 237 4.1E-93 T 25-04-2016 SMA_RS07185 0c24e68b86be1014f3d1036d8829fce1 239 SUPERFAMILY SSF51366 1 236 3.77E-71 T 25-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 SMA_RS07185 0c24e68b86be1014f3d1036d8829fce1 239 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 3 233 1.1E-82 T 25-04-2016 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16|UniPathway: UPA00031 SMA_RS07185 0c24e68b86be1014f3d1036d8829fce1 239 PANTHER PTHR21235 1 237 4.1E-93 T 25-04-2016 SMA_RS07185 0c24e68b86be1014f3d1036d8829fce1 239 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 2 237 35.206 T 25-04-2016 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16|UniPathway: UPA00031 SMA_RS07185 0c24e68b86be1014f3d1036d8829fce1 239 Pfam PF00977 Histidine biosynthesis protein 2 229 1.9E-76 T 25-04-2016 IPR006062 Histidine biosynthesis GO:0000105 SMA_RS07185 0c24e68b86be1014f3d1036d8829fce1 239 Gene3D G3DSA:3.20.20.70 1 237 2.2E-79 T 25-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SMA_RS07295 78c317727b0dd37da982e02ed407c5ae 147 SUPERFAMILY SSF141066 45 129 1.83E-18 T 25-04-2016 IPR018990 Proteinase inhibitor I42, chagasin SMA_RS07295 78c317727b0dd37da982e02ed407c5ae 147 Pfam PF09394 Chagasin family peptidase inhibitor I42 46 130 9.1E-18 T 25-04-2016 IPR018990 Proteinase inhibitor I42, chagasin SMA_RS04990 d49ef83ab78a5abc331c273ab9ed407e 981 SUPERFAMILY SSF52540 597 671 5.08E-8 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS04990 d49ef83ab78a5abc331c273ab9ed407e 981 SUPERFAMILY SSF52540 254 424 1.19E-26 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS04990 d49ef83ab78a5abc331c273ab9ed407e 981 Gene3D G3DSA:3.40.50.300 243 443 6.0E-21 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS04990 d49ef83ab78a5abc331c273ab9ed407e 981 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 5 199 6.2E-22 T 25-04-2016 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 SMA_RS04990 d49ef83ab78a5abc331c273ab9ed407e 981 Gene3D G3DSA:3.40.50.300 510 585 1.3E-7 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS04990 d49ef83ab78a5abc331c273ab9ed407e 981 Gene3D G3DSA:3.40.50.300 619 683 1.3E-7 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS04990 d49ef83ab78a5abc331c273ab9ed407e 981 SMART SM00487 251 452 5.5E-11 T 25-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain SMA_RS04990 d49ef83ab78a5abc331c273ab9ed407e 981 Pfam PF04851 Type III restriction enzyme, res subunit 254 422 1.8E-27 T 25-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 SMA_RS04990 d49ef83ab78a5abc331c273ab9ed407e 981 PANTHER PTHR30195 1 925 1.3E-108 T 25-04-2016 SMA_RS04990 d49ef83ab78a5abc331c273ab9ed407e 981 Pfam PF12008 Type I restriction and modification enzyme - subunit R C terminal 705 967 2.7E-26 T 25-04-2016 IPR022625 Type-1 restriction enzyme R protein, C-terminal SMA_RS04990 d49ef83ab78a5abc331c273ab9ed407e 981 TIGRFAM TIGR00348 hsdR: type I site-specific deoxyribonuclease, HsdR family 55 681 2.8E-94 T 25-04-2016 IPR004473 Restriction endonuclease, type I, HsdR GO:0003677|GO:0005524|GO:0009035|GO:0009307 SMA_RS04990 d49ef83ab78a5abc331c273ab9ed407e 981 SUPERFAMILY SSF52540 388 453 5.08E-8 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS04990 d49ef83ab78a5abc331c273ab9ed407e 981 PANTHER PTHR30195:SF16 1 925 1.3E-108 T 25-04-2016 SMA_RS09055 c3723bfaf810970cfd1246eca7891b0b 249 SUPERFAMILY SSF52540 4 236 1.13E-60 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS09055 c3723bfaf810970cfd1246eca7891b0b 249 PANTHER PTHR24220 5 247 1.3E-149 T 25-04-2016 SMA_RS09055 c3723bfaf810970cfd1246eca7891b0b 249 Pfam PF00005 ABC transporter 19 174 7.3E-33 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMA_RS09055 c3723bfaf810970cfd1246eca7891b0b 249 PANTHER PTHR24220:SF585 5 247 1.3E-149 T 25-04-2016 SMA_RS09055 c3723bfaf810970cfd1246eca7891b0b 249 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 4 249 1.2E-127 T 25-04-2016 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 SMA_RS09055 c3723bfaf810970cfd1246eca7891b0b 249 SMART SM00382 28 229 1.9E-13 T 25-04-2016 IPR003593 AAA+ ATPase domain SMA_RS09055 c3723bfaf810970cfd1246eca7891b0b 249 Gene3D G3DSA:3.40.50.300 3 244 7.3E-69 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS09055 c3723bfaf810970cfd1246eca7891b0b 249 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SMA_RS08195 6253b76fad929c5e1079902e9527704d 310 PANTHER PTHR12112:SF17 4 310 3.1E-117 T 25-04-2016 SMA_RS08195 6253b76fad929c5e1079902e9527704d 310 Pfam PF01368 DHH family 3 146 1.3E-25 T 25-04-2016 IPR001667 DDH domain SMA_RS08195 6253b76fad929c5e1079902e9527704d 310 SMART SM01131 182 308 1.6E-57 T 25-04-2016 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1 SMA_RS08195 6253b76fad929c5e1079902e9527704d 310 Hamap MF_00207 Probable manganese-dependent inorganic pyrophosphatase [ppaC]. 3 310 45.034 T 25-04-2016 IPR022934 Manganese-dependent inorganic pyrophosphatase, probable GO:0004427 KEGG: 00190+3.6.1.1 SMA_RS08195 6253b76fad929c5e1079902e9527704d 310 PANTHER PTHR12112 4 310 3.1E-117 T 25-04-2016 SMA_RS08195 6253b76fad929c5e1079902e9527704d 310 SUPERFAMILY SSF64182 3 308 3.53E-85 T 25-04-2016 SMA_RS08195 6253b76fad929c5e1079902e9527704d 310 Pfam PF02833 DHHA2 domain 185 306 8.9E-17 T 25-04-2016 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1 SMA_RS08195 6253b76fad929c5e1079902e9527704d 310 Gene3D G3DSA:3.90.1640.10 2 188 9.0E-63 T 25-04-2016 SMA_RS01895 157e10731dbea14dbf5b653599f450e1 202 Pfam PF04892 VanZ like family 80 181 4.2E-7 T 25-04-2016 IPR006976 VanZ-like SMA_RS04905 6dadf42bdfaefe0566ef87eefb4223e6 202 Pfam PF09335 SNARE associated Golgi protein 73 189 1.3E-14 T 25-04-2016 IPR032816 SNARE associated Golgi protein SMA_RS08440 0ae1dfd5c9946e8f7922fc8e8e7d611b 1029 Pfam PF00271 Helicase conserved C-terminal domain 862 973 6.3E-20 T 25-04-2016 IPR001650 Helicase, C-terminal SMA_RS08440 0ae1dfd5c9946e8f7922fc8e8e7d611b 1029 Pfam PF00176 SNF2 family N-terminal domain 598 852 8.5E-44 T 25-04-2016 IPR000330 SNF2-related, N-terminal domain GO:0005524 SMA_RS08440 0ae1dfd5c9946e8f7922fc8e8e7d611b 1029 SUPERFAMILY SSF52540 783 1027 1.74E-64 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS08440 0ae1dfd5c9946e8f7922fc8e8e7d611b 1029 SUPERFAMILY SSF52540 566 781 6.53E-53 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS08440 0ae1dfd5c9946e8f7922fc8e8e7d611b 1029 Gene3D G3DSA:3.40.50.300 580 748 1.6E-26 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS08440 0ae1dfd5c9946e8f7922fc8e8e7d611b 1029 SMART SM00490 891 973 8.2E-23 T 25-04-2016 IPR001650 Helicase, C-terminal SMA_RS08440 0ae1dfd5c9946e8f7922fc8e8e7d611b 1029 Pfam PF08455 Bacterial SNF2 helicase associated 215 579 8.6E-59 T 25-04-2016 IPR013663 Helicase, SWF/SNF/SWI type, bacterial SMA_RS08440 0ae1dfd5c9946e8f7922fc8e8e7d611b 1029 Gene3D G3DSA:3.40.50.300 858 1008 3.1E-24 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS08440 0ae1dfd5c9946e8f7922fc8e8e7d611b 1029 SMART SM00487 581 762 9.1E-35 T 25-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain SMA_RS08440 0ae1dfd5c9946e8f7922fc8e8e7d611b 1029 PANTHER PTHR10799:SF651 572 1026 2.8E-239 T 25-04-2016 SMA_RS08440 0ae1dfd5c9946e8f7922fc8e8e7d611b 1029 PANTHER PTHR10799:SF651 504 529 2.8E-239 T 25-04-2016 SMA_RS08440 0ae1dfd5c9946e8f7922fc8e8e7d611b 1029 PANTHER PTHR10799:SF651 1 82 2.8E-239 T 25-04-2016 SMA_RS08440 0ae1dfd5c9946e8f7922fc8e8e7d611b 1029 PANTHER PTHR10799:SF651 445 486 2.8E-239 T 25-04-2016 SMA_RS08440 0ae1dfd5c9946e8f7922fc8e8e7d611b 1029 PANTHER PTHR10799 572 1026 2.8E-239 T 25-04-2016 SMA_RS08440 0ae1dfd5c9946e8f7922fc8e8e7d611b 1029 PANTHER PTHR10799 504 529 2.8E-239 T 25-04-2016 SMA_RS08440 0ae1dfd5c9946e8f7922fc8e8e7d611b 1029 PANTHER PTHR10799 1 82 2.8E-239 T 25-04-2016 SMA_RS08440 0ae1dfd5c9946e8f7922fc8e8e7d611b 1029 PANTHER PTHR10799 445 486 2.8E-239 T 25-04-2016 SMA_RS02945 f01a7b9380e0e743ab3e5a52db51ba2a 260 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 13 245 8.7E-61 T 25-04-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 SMA_RS02945 f01a7b9380e0e743ab3e5a52db51ba2a 260 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 51 64 - T 25-04-2016 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 SMA_RS02945 f01a7b9380e0e743ab3e5a52db51ba2a 260 PANTHER PTHR10314:SF4 12 54 1.1E-18 T 25-04-2016 SMA_RS02945 f01a7b9380e0e743ab3e5a52db51ba2a 260 PANTHER PTHR10314:SF4 77 130 1.1E-18 T 25-04-2016 SMA_RS02945 f01a7b9380e0e743ab3e5a52db51ba2a 260 Gene3D G3DSA:3.20.20.70 5 251 1.3E-80 T 25-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SMA_RS02945 f01a7b9380e0e743ab3e5a52db51ba2a 260 SUPERFAMILY SSF51366 5 254 1.02E-71 T 25-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 SMA_RS02945 f01a7b9380e0e743ab3e5a52db51ba2a 260 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 15 258 29.975 T 25-04-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 SMA_RS02945 f01a7b9380e0e743ab3e5a52db51ba2a 260 PANTHER PTHR10314 12 54 1.1E-18 T 25-04-2016 SMA_RS02945 f01a7b9380e0e743ab3e5a52db51ba2a 260 PANTHER PTHR10314 77 130 1.1E-18 T 25-04-2016 SMA_RS02945 f01a7b9380e0e743ab3e5a52db51ba2a 260 Pfam PF00290 Tryptophan synthase alpha chain 12 248 9.2E-82 T 25-04-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 SMA_RS10495 2c9d8e0adb4a358eaf2877d3b1472f17 290 PANTHER PTHR33545 1 279 3.4E-73 T 25-04-2016 SMA_RS10495 2c9d8e0adb4a358eaf2877d3b1472f17 290 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 8 210 2.8E-58 T 25-04-2016 IPR003740 Uncharacterised membrane protein YitT SMA_RS10495 2c9d8e0adb4a358eaf2877d3b1472f17 290 PIRSF PIRSF006483 1 278 2.0E-77 T 25-04-2016 IPR003740 Uncharacterised membrane protein YitT SMA_RS10495 2c9d8e0adb4a358eaf2877d3b1472f17 290 Pfam PF10035 Uncharacterized protein conserved in bacteria (DUF2179) 216 270 2.0E-18 T 25-04-2016 IPR019264 Domain of unknown function DUF2179 SMA_RS02435 709c27504b25e5391c3e7c9bf3aca109 113 PANTHER PTHR35794 1 113 9.1E-39 T 25-04-2016 SMA_RS02435 709c27504b25e5391c3e7c9bf3aca109 113 PIRSF PIRSF029938 1 113 2.1E-44 T 25-04-2016 IPR011229 Cell cycle protein GpsB SMA_RS02435 709c27504b25e5391c3e7c9bf3aca109 113 TIGRFAM TIGR03544 DivI1A_domain: DivIVA domain 7 39 8.4E-16 T 25-04-2016 IPR019933 DivIVA domain SMA_RS02435 709c27504b25e5391c3e7c9bf3aca109 113 Pfam PF05103 DivIVA protein 6 62 1.0E-18 T 25-04-2016 IPR007793 DivIVA family SMA_RS02435 709c27504b25e5391c3e7c9bf3aca109 113 PANTHER PTHR35794:SF1 1 113 9.1E-39 T 25-04-2016 SMA_RS02435 709c27504b25e5391c3e7c9bf3aca109 113 Hamap MF_02011 Cell cycle protein GpsB [gpsB]. 1 109 24.133 T 25-04-2016 IPR011229 Cell cycle protein GpsB SMA_RS06725 aa6f136b5cd1d5593b7018129523e327 584 Pfam PF00239 Resolvase, N terminal domain 29 177 1.5E-30 T 25-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 SMA_RS06725 aa6f136b5cd1d5593b7018129523e327 584 SMART SM00857 29 178 2.1E-46 T 25-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 SMA_RS06725 aa6f136b5cd1d5593b7018129523e327 584 PANTHER PTHR30461 8 471 3.9E-51 T 25-04-2016 SMA_RS06725 aa6f136b5cd1d5593b7018129523e327 584 Gene3D G3DSA:3.40.50.1390 28 160 3.2E-31 T 25-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 SMA_RS06725 aa6f136b5cd1d5593b7018129523e327 584 PANTHER PTHR30461:SF3 8 471 3.9E-51 T 25-04-2016 SMA_RS06725 aa6f136b5cd1d5593b7018129523e327 584 SUPERFAMILY SSF53041 28 177 6.93E-36 T 25-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 SMA_RS06725 aa6f136b5cd1d5593b7018129523e327 584 Pfam PF13408 Recombinase zinc beta ribbon domain 331 392 8.8E-8 T 25-04-2016 IPR025827 Recombinase zinc beta ribbon domain SMA_RS06725 aa6f136b5cd1d5593b7018129523e327 584 Pfam PF07508 Recombinase 201 306 1.3E-24 T 25-04-2016 IPR011109 DNA-binding recombinase domain GO:0000150|GO:0003677 SMA_RS02145 d865352e826d327c4863b9db70bfa2db 380 PANTHER PTHR33392:SF5 5 337 4.8E-115 T 25-04-2016 SMA_RS02145 d865352e826d327c4863b9db70bfa2db 380 PANTHER PTHR33392 5 337 4.8E-115 T 25-04-2016 SMA_RS02145 d865352e826d327c4863b9db70bfa2db 380 TIGRFAM TIGR00350 lytR_cpsA_psr: cell envelope-related function transcriptional attenuator common domain 80 237 6.1E-45 T 25-04-2016 IPR004474 Cell envelope-related transcriptional attenuator domain SMA_RS02145 d865352e826d327c4863b9db70bfa2db 380 Pfam PF03816 Cell envelope-related transcriptional attenuator domain 81 237 2.1E-50 T 25-04-2016 IPR004474 Cell envelope-related transcriptional attenuator domain SMA_RS01595 86a85d63ca221468867b72740b47c326 193 PRINTS PR01002 Flagellar protein FlgJ signature 169 187 2.1E-5 T 25-04-2016 SMA_RS01595 86a85d63ca221468867b72740b47c326 193 PRINTS PR01002 Flagellar protein FlgJ signature 149 168 2.1E-5 T 25-04-2016 SMA_RS01595 86a85d63ca221468867b72740b47c326 193 PRINTS PR01002 Flagellar protein FlgJ signature 65 83 2.1E-5 T 25-04-2016 SMA_RS01595 86a85d63ca221468867b72740b47c326 193 PANTHER PTHR33308 43 193 5.5E-17 T 25-04-2016 SMA_RS01595 86a85d63ca221468867b72740b47c326 193 PANTHER PTHR33308:SF3 43 193 5.5E-17 T 25-04-2016 SMA_RS01595 86a85d63ca221468867b72740b47c326 193 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 52 188 9.1E-22 T 25-04-2016 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 SMA_RS01595 86a85d63ca221468867b72740b47c326 193 SUPERFAMILY SSF53955 42 97 1.67E-6 T 25-04-2016 IPR023346 Lysozyme-like domain SMA_RS01595 86a85d63ca221468867b72740b47c326 193 Gene3D G3DSA:1.10.530.10 37 83 3.1E-6 T 25-04-2016 SMA_RS01595 86a85d63ca221468867b72740b47c326 193 SMART SM00047 35 192 1.6E-25 T 25-04-2016 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 SMA_RS01815 d383facd19bfde6be759b2df66f62bcc 223 SUPERFAMILY SSF161098 21 202 1.24E-34 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SMA_RS01815 d383facd19bfde6be759b2df66f62bcc 223 PANTHER PTHR30151:SF23 20 223 7.0E-76 T 25-04-2016 SMA_RS01815 d383facd19bfde6be759b2df66f62bcc 223 Gene3D G3DSA:1.10.3720.10 9 200 2.8E-28 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SMA_RS01815 d383facd19bfde6be759b2df66f62bcc 223 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 43 212 1.8E-23 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SMA_RS01815 d383facd19bfde6be759b2df66f62bcc 223 PANTHER PTHR30151 20 223 7.0E-76 T 25-04-2016 SMA_RS08295 b9652d2f33bb136c579f955c1387ef88 241 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 98 112 - T 25-04-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 SMA_RS08295 b9652d2f33bb136c579f955c1387ef88 241 Pfam PF00849 RNA pseudouridylate synthase 61 194 1.8E-21 T 25-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 SMA_RS08295 b9652d2f33bb136c579f955c1387ef88 241 SMART SM00363 1 64 1.1E-17 T 25-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SMA_RS08295 b9652d2f33bb136c579f955c1387ef88 241 SUPERFAMILY SSF55174 1 55 2.35E-16 T 25-04-2016 SMA_RS08295 b9652d2f33bb136c579f955c1387ef88 241 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 65 225 6.4E-47 T 25-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 SMA_RS08295 b9652d2f33bb136c579f955c1387ef88 241 PANTHER PTHR21600 1 241 1.4E-82 T 25-04-2016 SMA_RS08295 b9652d2f33bb136c579f955c1387ef88 241 SUPERFAMILY SSF55120 45 235 1.46E-44 T 25-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 SMA_RS08295 b9652d2f33bb136c579f955c1387ef88 241 Pfam PF01479 S4 domain 1 47 5.0E-15 T 25-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SMA_RS08295 b9652d2f33bb136c579f955c1387ef88 241 PANTHER PTHR21600:SF2 1 241 1.4E-82 T 25-04-2016 SMA_RS08295 b9652d2f33bb136c579f955c1387ef88 241 Gene3D G3DSA:3.10.290.10 1 63 6.8E-27 T 25-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SMA_RS03465 a1bde9420265796435e816738c21a6e0 267 Pfam PF06541 Putative ABC-transporter type IV 10 159 4.5E-45 T 25-04-2016 IPR010540 Putative ABC-transporter type IV CmpB/TMEM229 SMA_RS09655 eae8ed4df2643e31bc45ffee16de1f90 124 Pfam PF05713 Bacterial mobilisation protein (MobC) 63 101 2.3E-5 T 25-04-2016 IPR008687 Bacterial mobilisation SMA_RS04430 be505cab6491f570bdd0df5bbe8aaed0 484 Pfam PF01943 Polysaccharide biosynthesis protein 11 273 1.2E-26 T 25-04-2016 IPR002797 Polysaccharide biosynthesis protein GO:0016020 SMA_RS04430 be505cab6491f570bdd0df5bbe8aaed0 484 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 326 463 5.4E-14 T 25-04-2016 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain SMA_RS04345 7178d25007f7d93fab68e4ce65bf03eb 235 Hamap MF_01627 Purine nucleoside phosphorylase DeoD-type [deoD]. 1 234 43.354 T 25-04-2016 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 SMA_RS04345 7178d25007f7d93fab68e4ce65bf03eb 235 SUPERFAMILY SSF53167 2 233 2.09E-85 T 25-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 SMA_RS04345 7178d25007f7d93fab68e4ce65bf03eb 235 Pfam PF01048 Phosphorylase superfamily 16 216 4.5E-45 T 25-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 SMA_RS04345 7178d25007f7d93fab68e4ce65bf03eb 235 PANTHER PTHR21234 1 235 4.5E-64 T 25-04-2016 IPR018017 Nucleoside phosphorylase SMA_RS04345 7178d25007f7d93fab68e4ce65bf03eb 235 PANTHER PTHR21234:SF8 1 235 4.5E-64 T 25-04-2016 SMA_RS04345 7178d25007f7d93fab68e4ce65bf03eb 235 TIGRFAM TIGR00107 deoD: purine nucleoside phosphorylase 4 231 2.9E-89 T 25-04-2016 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 SMA_RS04345 7178d25007f7d93fab68e4ce65bf03eb 235 Gene3D G3DSA:3.40.50.1580 8 233 1.2E-78 T 25-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 SMA_RS04345 7178d25007f7d93fab68e4ce65bf03eb 235 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 61 76 - T 25-04-2016 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 SMA_RS10055 5f15715ee4c66adf5cb8809275e244d2 154 Pfam PF06695 Putative small multi-drug export protein 16 141 1.3E-40 T 25-04-2016 IPR009577 Putative small multi-drug export SMA_RS10055 5f15715ee4c66adf5cb8809275e244d2 154 PANTHER PTHR36007:SF2 3 147 9.8E-63 T 25-04-2016 SMA_RS10055 5f15715ee4c66adf5cb8809275e244d2 154 PANTHER PTHR36007 3 147 9.8E-63 T 25-04-2016 SMA_RS09525 5e841730a788660d87aecd51c10bb33d 66 SUPERFAMILY SSF55008 4 54 4.58E-16 T 25-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 SMA_RS09525 5e841730a788660d87aecd51c10bb33d 66 Pfam PF00403 Heavy-metal-associated domain 6 49 5.1E-14 T 25-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 SMA_RS09525 5e841730a788660d87aecd51c10bb33d 66 Gene3D G3DSA:3.30.70.100 3 52 1.6E-18 T 25-04-2016 SMA_RS04570 10c3d0d5934e2c1e48906283604323e0 122 PANTHER PTHR38445 1 122 9.0E-22 T 25-04-2016 SMA_RS04570 10c3d0d5934e2c1e48906283604323e0 122 Gene3D G3DSA:1.10.10.10 2 76 4.0E-27 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMA_RS04570 10c3d0d5934e2c1e48906283604323e0 122 SMART SM00345 15 74 5.8E-20 T 25-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SMA_RS04570 10c3d0d5934e2c1e48906283604323e0 122 PANTHER PTHR38445:SF2 1 122 9.0E-22 T 25-04-2016 SMA_RS04570 10c3d0d5934e2c1e48906283604323e0 122 SUPERFAMILY SSF46785 4 78 2.87E-22 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMA_RS04570 10c3d0d5934e2c1e48906283604323e0 122 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 48 64 3.3E-6 T 25-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SMA_RS04570 10c3d0d5934e2c1e48906283604323e0 122 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 34 48 3.3E-6 T 25-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SMA_RS04570 10c3d0d5934e2c1e48906283604323e0 122 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 74 7.5E-19 T 25-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SMA_RS09275 923620ad7a325007fd35e762454fa5cf 108 Pfam PF04397 LytTr DNA-binding domain 13 105 2.8E-19 T 25-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 SMA_RS09275 923620ad7a325007fd35e762454fa5cf 108 Gene3D G3DSA:2.40.50.40 2 70 5.8E-14 T 25-04-2016 SMA_RS09275 923620ad7a325007fd35e762454fa5cf 108 SMART SM00850 10 106 9.4E-15 T 25-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 SMA_RS06845 9bc9f5d3bd293bde1d8907041026130f 362 Pfam PF13155 Toprim-like 203 327 2.3E-10 T 25-04-2016 SMA_RS06845 9bc9f5d3bd293bde1d8907041026130f 362 Gene3D G3DSA:3.90.580.10 4 79 3.1E-10 T 25-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 SMA_RS06845 9bc9f5d3bd293bde1d8907041026130f 362 SUPERFAMILY SSF57783 4 79 4.59E-12 T 25-04-2016 SMA_RS06845 9bc9f5d3bd293bde1d8907041026130f 362 Gene3D G3DSA:3.40.1360.10 196 235 1.1E-8 T 25-04-2016 SMA_RS06845 9bc9f5d3bd293bde1d8907041026130f 362 Gene3D G3DSA:3.40.1360.10 269 344 1.1E-8 T 25-04-2016 SMA_RS06845 9bc9f5d3bd293bde1d8907041026130f 362 Pfam PF13154 Protein of unknown function (DUF3991) 111 172 4.6E-5 T 25-04-2016 IPR025054 Domain of unknown function DUF3991 SMA_RS08275 8e6c06a81aab2e4d00391e546b5efe70 615 PANTHER PTHR11785 7 476 5.4E-161 T 25-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 SMA_RS08275 8e6c06a81aab2e4d00391e546b5efe70 615 PANTHER PTHR11785 515 527 5.4E-161 T 25-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 SMA_RS08275 8e6c06a81aab2e4d00391e546b5efe70 615 PANTHER PTHR11785:SF125 7 476 5.4E-161 T 25-04-2016 SMA_RS08275 8e6c06a81aab2e4d00391e546b5efe70 615 PANTHER PTHR11785:SF125 515 527 5.4E-161 T 25-04-2016 SMA_RS08275 8e6c06a81aab2e4d00391e546b5efe70 615 Pfam PF13520 Amino acid permease 29 439 1.7E-30 T 25-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 SMA_RS05255 4424acdba296c895e38ab92eaf55a8f0 350 PANTHER PTHR32196 10 347 4.0E-93 T 25-04-2016 SMA_RS05255 4424acdba296c895e38ab92eaf55a8f0 350 PANTHER PTHR32196:SF30 10 347 4.0E-93 T 25-04-2016 SMA_RS05255 4424acdba296c895e38ab92eaf55a8f0 350 Pfam PF02653 Branched-chain amino acid transport system / permease component 51 331 3.6E-35 T 25-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 SMA_RS07425 184f0ee496c686919684114236ecd071 319 Pfam PF13800 Sigma factor regulator N-terminal 9 95 6.7E-11 T 25-04-2016 IPR029101 Sigma factor regulator, N-terminal SMA_RS07425 184f0ee496c686919684114236ecd071 319 Pfam PF13791 Sigma factor regulator C-terminal 166 307 2.1E-26 T 25-04-2016 IPR025672 Sigma factor regulator C-terminal domain SMA_RS03785 5d3697309df33a0e4fb2caa87a776e62 78 TIGRFAM TIGR02327 int_mem_ywzB: conserved hypothetical integral membrane protein 8 77 5.8E-25 T 25-04-2016 IPR009526 Protein of unknown function DUF1146 SMA_RS03785 5d3697309df33a0e4fb2caa87a776e62 78 Pfam PF06612 Protein of unknown function (DUF1146) 14 64 1.3E-17 T 25-04-2016 IPR009526 Protein of unknown function DUF1146 SMA_RS00205 d43cae7fd5d553c14d8431d44fb87728 168 Pfam PF04093 rod shape-determining protein MreD 6 164 5.3E-18 T 25-04-2016 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 SMA_RS00205 d43cae7fd5d553c14d8431d44fb87728 168 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 12 157 2.6E-9 T 25-04-2016 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 SMA_RS09670 2e98e1ea4c095023d83e77460e71a219 1545 Pfam PF13155 Toprim-like 225 346 3.9E-8 T 25-04-2016 SMA_RS09670 2e98e1ea4c095023d83e77460e71a219 1545 Gene3D G3DSA:3.40.1360.10 219 353 3.3E-5 T 25-04-2016 SMA_RS09670 2e98e1ea4c095023d83e77460e71a219 1545 Gene3D G3DSA:4.10.1080.10 1101 1178 5.3E-6 T 25-04-2016 IPR028974 TSP type-3 repeat GO:0005509 SMA_RS09670 2e98e1ea4c095023d83e77460e71a219 1545 Pfam PF13154 Protein of unknown function (DUF3991) 131 209 1.2E-5 T 25-04-2016 IPR025054 Domain of unknown function DUF3991 SMA_RS09670 2e98e1ea4c095023d83e77460e71a219 1545 Gene3D G3DSA:3.90.580.10 21 97 6.9E-5 T 25-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 SMA_RS09670 2e98e1ea4c095023d83e77460e71a219 1545 SUPERFAMILY SSF57783 16 97 1.34E-7 T 25-04-2016 SMA_RS01490 01313ba96e8304f3011a07ec9e6e5b71 483 PANTHER PTHR30595 32 483 2.1E-42 T 25-04-2016 SMA_RS01490 01313ba96e8304f3011a07ec9e6e5b71 483 Pfam PF04326 Putative DNA-binding domain 19 139 1.6E-12 T 25-04-2016 IPR007421 Schlafen, AAA domain GO:0005524 SMA_RS01490 01313ba96e8304f3011a07ec9e6e5b71 483 PANTHER PTHR30595:SF3 32 483 2.1E-42 T 25-04-2016 SMA_RS01490 01313ba96e8304f3011a07ec9e6e5b71 483 Pfam PF13749 Putative ATP-dependent DNA helicase recG C-terminal 307 392 1.5E-24 T 25-04-2016 IPR025831 ATP-dependent DNA helicase RecG, C-terminal domain SMA_RS08795 a3a78800804b61ed8ab8bd3af7139f06 142 PANTHER PTHR11078 7 142 1.0E-41 T 25-04-2016 IPR011605 NusB antitermination factor GO:0006353 SMA_RS08795 a3a78800804b61ed8ab8bd3af7139f06 142 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 8 140 1.0E-36 T 25-04-2016 IPR011605 NusB antitermination factor GO:0006353 SMA_RS08795 a3a78800804b61ed8ab8bd3af7139f06 142 SUPERFAMILY SSF48013 8 139 3.4E-35 T 25-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 SMA_RS08795 a3a78800804b61ed8ab8bd3af7139f06 142 Gene3D G3DSA:1.10.940.10 6 140 6.3E-41 T 25-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 SMA_RS08795 a3a78800804b61ed8ab8bd3af7139f06 142 Pfam PF01029 NusB family 11 140 1.7E-30 T 25-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 SMA_RS08795 a3a78800804b61ed8ab8bd3af7139f06 142 Hamap MF_00073 N utilization substance protein B homolog [nusB]. 7 142 20.18 T 25-04-2016 IPR011605 NusB antitermination factor GO:0006353 SMA_RS03445 4d4b87ae19cddf8614cbc10535e73f1c 75 PANTHER PTHR34386 2 75 1.1E-17 T 25-04-2016 SMA_RS03445 4d4b87ae19cddf8614cbc10535e73f1c 75 SUPERFAMILY SSF52833 4 74 1.01E-17 T 25-04-2016 IPR012336 Thioredoxin-like fold SMA_RS03445 4d4b87ae19cddf8614cbc10535e73f1c 75 PANTHER PTHR34386:SF3 2 75 1.1E-17 T 25-04-2016 SMA_RS03445 4d4b87ae19cddf8614cbc10535e73f1c 75 Gene3D G3DSA:3.40.30.10 4 74 1.3E-23 T 25-04-2016 IPR012336 Thioredoxin-like fold SMA_RS03445 4d4b87ae19cddf8614cbc10535e73f1c 75 Pfam PF00462 Glutaredoxin 5 58 1.3E-13 T 25-04-2016 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 SMA_RS03445 4d4b87ae19cddf8614cbc10535e73f1c 75 TIGRFAM TIGR02194 GlrX_NrdH: glutaredoxin-like protein NrdH 5 74 3.4E-33 T 25-04-2016 IPR011909 Glutaredoxin-like protein NrdH GO:0045454 SMA_RS07660 e3261828370d9cae2ac524577e79e44b 234 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 47 219 1.3E-19 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SMA_RS07660 e3261828370d9cae2ac524577e79e44b 234 Gene3D G3DSA:1.10.3720.10 21 224 3.5E-48 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SMA_RS07660 e3261828370d9cae2ac524577e79e44b 234 PANTHER PTHR30614 16 234 1.0E-77 T 25-04-2016 SMA_RS07660 e3261828370d9cae2ac524577e79e44b 234 SUPERFAMILY SSF161098 25 217 1.44E-44 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SMA_RS07660 e3261828370d9cae2ac524577e79e44b 234 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 23 123 1.3E-25 T 25-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 SMA_RS01625 8177dae023a694daa822be7ab066f300 255 SUPERFAMILY SSF53613 1 250 9.04E-56 T 25-04-2016 IPR029056 Ribokinase-like SMA_RS01625 8177dae023a694daa822be7ab066f300 255 Gene3D G3DSA:3.40.1190.20 5 249 3.6E-65 T 25-04-2016 IPR029056 Ribokinase-like SMA_RS01625 8177dae023a694daa822be7ab066f300 255 PANTHER PTHR20858 1 252 2.1E-57 T 25-04-2016 SMA_RS01625 8177dae023a694daa822be7ab066f300 255 Pfam PF08543 Phosphomethylpyrimidine kinase 13 248 6.7E-62 T 25-04-2016 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase UniPathway: UPA00647 SMA_RS02705 dc89b453fe22f5bc4f4eccb5f1c6e61e 163 ProSitePatterns PS01265 Tpx family signature. 82 93 - T 25-04-2016 IPR018219 Thiol peroxidase conserved site GO:0016684|GO:0055114 SMA_RS02705 dc89b453fe22f5bc4f4eccb5f1c6e61e 163 SUPERFAMILY SSF52833 3 158 1.15E-37 T 25-04-2016 IPR012336 Thioredoxin-like fold SMA_RS02705 dc89b453fe22f5bc4f4eccb5f1c6e61e 163 Pfam PF08534 Redoxin 19 155 7.5E-23 T 25-04-2016 IPR013740 Redoxin GO:0016491 SMA_RS02705 dc89b453fe22f5bc4f4eccb5f1c6e61e 163 Gene3D G3DSA:3.40.30.10 5 163 1.1E-41 T 25-04-2016 IPR012336 Thioredoxin-like fold SMA_RS02705 dc89b453fe22f5bc4f4eccb5f1c6e61e 163 PANTHER PTHR10681 13 163 3.0E-42 T 25-04-2016 SMA_RS02705 dc89b453fe22f5bc4f4eccb5f1c6e61e 163 PANTHER PTHR10681:SF81 13 163 3.0E-42 T 25-04-2016 SMA_RS08305 24b561881baea21cbb567a995d6d5497 234 Hamap MF_01805 Segregation and condensation protein A [scpA]. 1 234 25.294 T 25-04-2016 IPR003768 Segregation and condensation protein A SMA_RS08305 24b561881baea21cbb567a995d6d5497 234 Pfam PF02616 Segregation and condensation protein ScpA 18 229 9.9E-28 T 25-04-2016 IPR003768 Segregation and condensation protein A SMA_RS08305 24b561881baea21cbb567a995d6d5497 234 PANTHER PTHR33969 1 233 3.7E-65 T 25-04-2016 SMA_RS08305 24b561881baea21cbb567a995d6d5497 234 PANTHER PTHR33969:SF2 1 233 3.7E-65 T 25-04-2016 SMA_RS03025 62039bba775a10a71ce741c8bc033eed 429 Hamap MF_00912 Cell division protein DivIB [divIB]. 26 371 28.871 T 25-04-2016 IPR026580 Cell division protein DivIB SMA_RS03025 62039bba775a10a71ce741c8bc033eed 429 PANTHER PTHR37820 17 393 1.6E-42 T 25-04-2016 SMA_RS03025 62039bba775a10a71ce741c8bc033eed 429 Pfam PF08478 POTRA domain, FtsQ-type 154 224 1.1E-13 T 25-04-2016 IPR013685 Polypeptide-transport-associated, FtsQ-type SMA_RS02550 60aafbbffddd6ed61b53afc1102e9a03 220 SUPERFAMILY SSF53271 45 219 1.85E-21 T 25-04-2016 IPR029057 Phosphoribosyltransferase-like SMA_RS02550 60aafbbffddd6ed61b53afc1102e9a03 220 PANTHER PTHR11907 25 220 4.4E-41 T 25-04-2016 SMA_RS02550 60aafbbffddd6ed61b53afc1102e9a03 220 Gene3D G3DSA:3.40.50.2020 55 220 1.2E-14 T 25-04-2016 IPR029057 Phosphoribosyltransferase-like SMA_RS02550 60aafbbffddd6ed61b53afc1102e9a03 220 PANTHER PTHR11907:SF9 25 220 4.4E-41 T 25-04-2016 SMA_RS10130 75e5f82bbf2a21b09cd09e063fb029f4 105 PANTHER PTHR40066 4 105 3.7E-29 T 25-04-2016 SMA_RS10130 75e5f82bbf2a21b09cd09e063fb029f4 105 PANTHER PTHR40066:SF1 4 105 3.7E-29 T 25-04-2016 SMA_RS10130 75e5f82bbf2a21b09cd09e063fb029f4 105 Pfam PF06949 Protein of unknown function (DUF1292) 23 103 9.8E-16 T 25-04-2016 IPR009711 Uncharacterised protein family UPF0473 SMA_RS10130 75e5f82bbf2a21b09cd09e063fb029f4 105 Hamap MF_01448 UPF0473 protein . 14 104 22.985 T 25-04-2016 IPR009711 Uncharacterised protein family UPF0473 SMA_RS04640 cc92648c72397956f5f0eb7588d3c734 277 PANTHER PTHR33514 1 268 3.0E-98 T 25-04-2016 SMA_RS04640 cc92648c72397956f5f0eb7588d3c734 277 PANTHER PTHR33514:SF1 1 268 3.0E-98 T 25-04-2016 SMA_RS04640 cc92648c72397956f5f0eb7588d3c734 277 Pfam PF02361 Cobalt transport protein 18 236 7.2E-27 T 25-04-2016 IPR003339 ABC/ECF transporter, transmembrane component SMA_RS08535 a2c5884b2778a40cfc558fc00b9005dd 209 PANTHER PTHR15020 1 209 2.1E-61 T 25-04-2016 SMA_RS08535 a2c5884b2778a40cfc558fc00b9005dd 209 Pfam PF13460 NAD(P)H-binding 8 174 1.4E-14 T 25-04-2016 IPR016040 NAD(P)-binding domain SMA_RS08535 a2c5884b2778a40cfc558fc00b9005dd 209 SUPERFAMILY SSF51735 1 208 6.85E-26 T 25-04-2016 IPR016040 NAD(P)-binding domain SMA_RS08535 a2c5884b2778a40cfc558fc00b9005dd 209 Gene3D G3DSA:3.40.50.720 1 208 3.9E-22 T 25-04-2016 IPR016040 NAD(P)-binding domain SMA_RS08535 a2c5884b2778a40cfc558fc00b9005dd 209 PANTHER PTHR15020:SF29 1 209 2.1E-61 T 25-04-2016 SMA_RS04160 33710f577de1919983fcf4cc3c6b03b0 108 SMART SM00450 14 105 7.9E-17 T 25-04-2016 IPR001763 Rhodanese-like domain SMA_RS04160 33710f577de1919983fcf4cc3c6b03b0 108 Gene3D G3DSA:3.40.250.10 10 102 7.9E-28 T 25-04-2016 IPR001763 Rhodanese-like domain SMA_RS04160 33710f577de1919983fcf4cc3c6b03b0 108 Pfam PF00581 Rhodanese-like domain 17 101 3.7E-15 T 25-04-2016 IPR001763 Rhodanese-like domain SMA_RS04160 33710f577de1919983fcf4cc3c6b03b0 108 SUPERFAMILY SSF52821 5 102 4.06E-29 T 25-04-2016 IPR001763 Rhodanese-like domain SMA_RS10250 5cfe4cfac06e6a039cf7307200ed5253 58 PANTHER PTHR35534 1 58 2.6E-24 T 25-04-2016 SMA_RS10250 5cfe4cfac06e6a039cf7307200ed5253 58 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 54 17.214 T 25-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 SMA_RS10250 5cfe4cfac06e6a039cf7307200ed5253 58 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 54 2.1E-18 T 25-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 SMA_RS10250 5cfe4cfac06e6a039cf7307200ed5253 58 Pfam PF01783 Ribosomal L32p protein family 2 54 2.2E-18 T 25-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 SMA_RS10250 5cfe4cfac06e6a039cf7307200ed5253 58 SUPERFAMILY SSF57829 2 54 7.94E-16 T 25-04-2016 IPR011332 Zinc-binding ribosomal protein GO:0006412 SMA_RS09730 902dd120d61115a27a84275ed808cdc3 118 Pfam PF12666 PrgI family protein 11 87 6.9E-7 T 25-04-2016 IPR024414 Uncharacterised protein family PrgI SMA_RS02090 e49d471e87f80386dd4fc410beb92f3d 425 PRINTS PR00981 Seryl-tRNA synthetase signature 263 275 1.8E-34 T 25-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 SMA_RS02090 e49d471e87f80386dd4fc410beb92f3d 425 PRINTS PR00981 Seryl-tRNA synthetase signature 315 328 1.8E-34 T 25-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 SMA_RS02090 e49d471e87f80386dd4fc410beb92f3d 425 PRINTS PR00981 Seryl-tRNA synthetase signature 350 366 1.8E-34 T 25-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 SMA_RS02090 e49d471e87f80386dd4fc410beb92f3d 425 PRINTS PR00981 Seryl-tRNA synthetase signature 275 288 1.8E-34 T 25-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 SMA_RS02090 e49d471e87f80386dd4fc410beb92f3d 425 PRINTS PR00981 Seryl-tRNA synthetase signature 332 348 1.8E-34 T 25-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 SMA_RS02090 e49d471e87f80386dd4fc410beb92f3d 425 PANTHER PTHR11778 1 425 1.6E-218 T 25-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 SMA_RS02090 e49d471e87f80386dd4fc410beb92f3d 425 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 222 399 1.3E-37 T 25-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SMA_RS02090 e49d471e87f80386dd4fc410beb92f3d 425 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 416 1.2E-176 T 25-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 SMA_RS02090 e49d471e87f80386dd4fc410beb92f3d 425 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 108 1.1E-31 T 25-04-2016 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|UniPathway: UPA00906 SMA_RS02090 e49d471e87f80386dd4fc410beb92f3d 425 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 421 42.794 T 25-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 SMA_RS02090 e49d471e87f80386dd4fc410beb92f3d 425 Gene3D G3DSA:3.30.930.10 106 420 1.2E-145 T 25-04-2016 SMA_RS02090 e49d471e87f80386dd4fc410beb92f3d 425 PIRSF PIRSF001529 1 425 1.9E-185 T 25-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 SMA_RS02090 e49d471e87f80386dd4fc410beb92f3d 425 SUPERFAMILY SSF55681 117 419 8.36E-110 T 25-04-2016 SMA_RS02090 e49d471e87f80386dd4fc410beb92f3d 425 SUPERFAMILY SSF46589 1 113 2.25E-29 T 25-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 SMA_RS02090 e49d471e87f80386dd4fc410beb92f3d 425 Gene3D G3DSA:1.10.287.40 1 105 9.7E-24 T 25-04-2016 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|UniPathway: UPA00906 SMA_RS07655 8fe4fd9787d2b634489da38ac56b628a 270 SMART SM00062 43 264 7.2E-51 T 25-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SMA_RS07655 8fe4fd9787d2b634489da38ac56b628a 270 Gene3D G3DSA:3.40.190.10 225 260 1.6E-36 T 25-04-2016 SMA_RS07655 8fe4fd9787d2b634489da38ac56b628a 270 Gene3D G3DSA:3.40.190.10 40 121 1.6E-36 T 25-04-2016 SMA_RS07655 8fe4fd9787d2b634489da38ac56b628a 270 SUPERFAMILY SSF53850 1 260 1.76E-57 T 25-04-2016 SMA_RS07655 8fe4fd9787d2b634489da38ac56b628a 270 PANTHER PTHR18966:SF191 27 259 3.9E-31 T 25-04-2016 SMA_RS07655 8fe4fd9787d2b634489da38ac56b628a 270 PANTHER PTHR18966 27 259 3.9E-31 T 25-04-2016 SMA_RS07655 8fe4fd9787d2b634489da38ac56b628a 270 Gene3D G3DSA:3.40.190.10 122 224 9.7E-22 T 25-04-2016 SMA_RS07655 8fe4fd9787d2b634489da38ac56b628a 270 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 44 260 5.0E-49 T 25-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SMA_RS09480 9548e0a11b95fdf32995b7b2b2eda260 450 Pfam PF06782 Uncharacterised protein family (UPF0236) 27 388 9.6E-18 T 25-04-2016 IPR009620 Uncharacterised protein family UPF0236 SMA_RS04030 c6d59f4a8452bb4124fc001eec73338a 289 Pfam PF02653 Branched-chain amino acid transport system / permease component 2 270 1.9E-30 T 25-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 SMA_RS04030 c6d59f4a8452bb4124fc001eec73338a 289 PANTHER PTHR32196:SF27 2 280 1.9E-71 T 25-04-2016 SMA_RS04030 c6d59f4a8452bb4124fc001eec73338a 289 PANTHER PTHR32196 2 280 1.9E-71 T 25-04-2016 SMA_RS01280 742e8e67384ef5cc903548837dcd9313 423 Gene3D G3DSA:3.40.190.10 42 161 5.3E-23 T 25-04-2016 SMA_RS01280 742e8e67384ef5cc903548837dcd9313 423 Gene3D G3DSA:3.40.190.10 162 360 8.7E-37 T 25-04-2016 SMA_RS01280 742e8e67384ef5cc903548837dcd9313 423 Pfam PF01547 Bacterial extracellular solute-binding protein 48 340 4.2E-39 T 25-04-2016 IPR006059 Solute-binding family 1 GO:0005215|GO:0006810 SMA_RS01280 742e8e67384ef5cc903548837dcd9313 423 PANTHER PTHR30061 6 360 2.6E-67 T 25-04-2016 SMA_RS01280 742e8e67384ef5cc903548837dcd9313 423 PANTHER PTHR30061:SF1 6 360 2.6E-67 T 25-04-2016 SMA_RS01280 742e8e67384ef5cc903548837dcd9313 423 SUPERFAMILY SSF53850 24 412 2.62E-72 T 25-04-2016 SMA_RS05990 ba0ca44887a000244544c434e397b166 211 PANTHER PTHR30177:SF4 2 201 2.4E-49 T 25-04-2016 SMA_RS05990 ba0ca44887a000244544c434e397b166 211 SUPERFAMILY SSF161098 15 194 2.09E-33 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SMA_RS05990 ba0ca44887a000244544c434e397b166 211 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 39 201 3.2E-21 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SMA_RS05990 ba0ca44887a000244544c434e397b166 211 Gene3D G3DSA:1.10.3720.10 12 202 7.5E-27 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SMA_RS05990 ba0ca44887a000244544c434e397b166 211 PANTHER PTHR30177 2 201 2.4E-49 T 25-04-2016 SMA_RS07430 ae74aa8ba5301096804e296fedaf7322 173 SUPERFAMILY SSF88659 110 164 2.06E-13 T 25-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMA_RS07430 ae74aa8ba5301096804e296fedaf7322 173 SUPERFAMILY SSF88946 25 93 2.16E-7 T 25-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMA_RS07430 ae74aa8ba5301096804e296fedaf7322 173 PANTHER PTHR30173 20 171 1.4E-21 T 25-04-2016 SMA_RS07430 ae74aa8ba5301096804e296fedaf7322 173 Gene3D G3DSA:1.10.1740.10 22 81 2.8E-8 T 25-04-2016 SMA_RS07430 ae74aa8ba5301096804e296fedaf7322 173 Gene3D G3DSA:1.10.10.10 106 165 4.4E-14 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMA_RS07430 ae74aa8ba5301096804e296fedaf7322 173 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 27 162 6.7E-14 T 25-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMA_RS07430 ae74aa8ba5301096804e296fedaf7322 173 Pfam PF08281 Sigma-70, region 4 107 158 7.5E-12 T 25-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMA_RS06675 b7e18150a455518f25d0fcc234ae88d5 220 SMART SM00382 31 217 5.3E-10 T 25-04-2016 IPR003593 AAA+ ATPase domain SMA_RS06675 b7e18150a455518f25d0fcc234ae88d5 220 Gene3D G3DSA:3.40.50.300 5 213 1.8E-51 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS06675 b7e18150a455518f25d0fcc234ae88d5 220 Pfam PF00005 ABC transporter 22 165 1.4E-28 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMA_RS06675 b7e18150a455518f25d0fcc234ae88d5 220 SUPERFAMILY SSF52540 5 214 1.67E-51 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS06675 b7e18150a455518f25d0fcc234ae88d5 220 PANTHER PTHR24220 8 211 7.3E-59 T 25-04-2016 SMA_RS02885 6a5539d5cf435b68688efd1aecf214e0 243 PIRSF PIRSF006648 2 241 2.3E-14 T 25-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 SMA_RS02885 6a5539d5cf435b68688efd1aecf214e0 243 Pfam PF12698 ABC-2 family transporter protein 43 234 3.4E-16 T 25-04-2016 SMA_RS02885 6a5539d5cf435b68688efd1aecf214e0 243 PANTHER PTHR30294 1 243 2.4E-46 T 25-04-2016 SMA_RS02885 6a5539d5cf435b68688efd1aecf214e0 243 PANTHER PTHR30294:SF6 1 243 2.4E-46 T 25-04-2016 SMA_RS06680 23c80cf5f58c765a368f283c2e66a5c1 259 Pfam PF03649 Uncharacterised protein family (UPF0014) 10 246 3.0E-76 T 25-04-2016 IPR005226 UPF0014 family SMA_RS06680 23c80cf5f58c765a368f283c2e66a5c1 259 PANTHER PTHR30028 7 259 2.8E-74 T 25-04-2016 SMA_RS06680 23c80cf5f58c765a368f283c2e66a5c1 259 TIGRFAM TIGR00245 TIGR00245: TIGR00245 family protein 10 252 2.6E-73 T 25-04-2016 IPR005226 UPF0014 family SMA_RS06680 23c80cf5f58c765a368f283c2e66a5c1 259 PANTHER PTHR30028:SF0 7 259 2.8E-74 T 25-04-2016 IPR005226 UPF0014 family SMA_RS06060 0038b12a6beccd4a129bcb524c8e0ab2 588 SUPERFAMILY SSF90123 9 333 2.22E-81 T 25-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SMA_RS06060 0038b12a6beccd4a129bcb524c8e0ab2 588 PANTHER PTHR24221 1 586 8.0E-285 T 25-04-2016 SMA_RS06060 0038b12a6beccd4a129bcb524c8e0ab2 588 Pfam PF00664 ABC transporter transmembrane region 21 304 1.2E-53 T 25-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SMA_RS06060 0038b12a6beccd4a129bcb524c8e0ab2 588 PANTHER PTHR24221:SF271 1 586 8.0E-285 T 25-04-2016 SMA_RS06060 0038b12a6beccd4a129bcb524c8e0ab2 588 Gene3D G3DSA:1.20.1560.10 9 333 2.9E-82 T 25-04-2016 SMA_RS06060 0038b12a6beccd4a129bcb524c8e0ab2 588 SMART SM00382 374 546 2.0E-16 T 25-04-2016 IPR003593 AAA+ ATPase domain SMA_RS06060 0038b12a6beccd4a129bcb524c8e0ab2 588 ProSitePatterns PS00211 ABC transporters family signature. 486 500 - T 25-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SMA_RS06060 0038b12a6beccd4a129bcb524c8e0ab2 588 Gene3D G3DSA:3.40.50.300 349 579 5.2E-79 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS06060 0038b12a6beccd4a129bcb524c8e0ab2 588 SUPERFAMILY SSF52540 342 585 3.24E-90 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS06060 0038b12a6beccd4a129bcb524c8e0ab2 588 Pfam PF00005 ABC transporter 366 514 6.7E-34 T 25-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMA_RS08685 45d82ee9023cbdf82e7d5625d0992add 182 Gene3D G3DSA:3.40.50.850 1 182 1.6E-50 T 25-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 SMA_RS08685 45d82ee9023cbdf82e7d5625d0992add 182 Pfam PF00857 Isochorismatase family 4 176 1.9E-36 T 25-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 SMA_RS08685 45d82ee9023cbdf82e7d5625d0992add 182 PANTHER PTHR11080 1 182 2.3E-46 T 25-04-2016 SMA_RS08685 45d82ee9023cbdf82e7d5625d0992add 182 SUPERFAMILY SSF52499 2 181 5.1E-51 T 25-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 SMA_RS07585 32747e119c73795213a404082cd7bc2c 270 TIGRFAM TIGR03943 TIGR03943: TIGR03943 family protein 19 265 4.0E-50 T 25-04-2016 IPR015402 Protein of unknown function DUF1980 SMA_RS07585 32747e119c73795213a404082cd7bc2c 270 Pfam PF09323 Domain of unknown function (DUF1980) 1 177 1.4E-61 T 25-04-2016 IPR015402 Protein of unknown function DUF1980 SMA_RS07585 32747e119c73795213a404082cd7bc2c 270 PANTHER PTHR40047 1 270 4.8E-73 T 25-04-2016 SMA_RS02275 007453c8a33de3608e31c104744eecf4 171 Pfam PF10688 Bacterial inner membrane protein 6 159 9.4E-20 T 25-04-2016 IPR019629 Uncharacterised protein family HI1736/YgjV SMA_RS02515 479645fa6d40d6c05ed53d2d8f4aa813 341 SUPERFAMILY SSF55874 217 327 3.42E-13 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMA_RS02515 479645fa6d40d6c05ed53d2d8f4aa813 341 PIRSF PIRSF037431 1 335 2.8E-125 T 25-04-2016 IPR017202 Sensor histidine kinase LiaS/VraS GO:0000155|GO:0000160|GO:0004673|GO:0016021 SMA_RS02515 479645fa6d40d6c05ed53d2d8f4aa813 341 PANTHER PTHR24421:SF1 6 341 1.4E-51 T 25-04-2016 SMA_RS02515 479645fa6d40d6c05ed53d2d8f4aa813 341 Gene3D G3DSA:3.30.565.10 178 190 1.9E-8 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMA_RS02515 479645fa6d40d6c05ed53d2d8f4aa813 341 Gene3D G3DSA:3.30.565.10 234 329 1.9E-8 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMA_RS02515 479645fa6d40d6c05ed53d2d8f4aa813 341 Pfam PF07730 Histidine kinase 132 199 9.6E-16 T 25-04-2016 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 SMA_RS02515 479645fa6d40d6c05ed53d2d8f4aa813 341 PANTHER PTHR24421 6 341 1.4E-51 T 25-04-2016 SMA_RS06165 6e9c6b4e198cbbb3da0db6ba2d9fc9c5 80 Pfam PF13083 KH domain 6 76 2.5E-16 T 25-04-2016 SMA_RS06165 6e9c6b4e198cbbb3da0db6ba2d9fc9c5 80 PANTHER PTHR34654 2 80 1.9E-22 T 25-04-2016 SMA_RS06165 6e9c6b4e198cbbb3da0db6ba2d9fc9c5 80 Gene3D G3DSA:3.30.300.120 8 77 7.5E-11 T 25-04-2016 SMA_RS06165 6e9c6b4e198cbbb3da0db6ba2d9fc9c5 80 Hamap MF_00088 UPF0109 protein . 4 77 15.817 T 25-04-2016 IPR020627 Uncharacterised protein family UPF0109 SMA_RS10280 cc6d090e06f2330e9f51257073bdf924 103 SUPERFAMILY SSF54909 1 82 7.04E-13 T 25-04-2016 IPR011008 Dimeric alpha-beta barrel SMA_RS10280 cc6d090e06f2330e9f51257073bdf924 103 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 79 1.8E-11 T 25-04-2016 IPR007138 Antibiotic biosynthesis monooxygenase domain SMA_RS10280 cc6d090e06f2330e9f51257073bdf924 103 Gene3D G3DSA:3.30.70.900 1 102 6.1E-18 T 25-04-2016 SMA_RS03425 a8e42f9a6fd1a48fbfd52695c02f51eb 188 Pfam PF06736 Protein of unknown function (DUF1211) 8 92 5.8E-25 T 25-04-2016 IPR010617 Endosomal/lysomomal potassium channel TMEM175 GO:0005267 SMA_RS00785 fd89fecc21a79767576d7051461dde1d 432 ProSitePatterns PS00163 Fumarate lyases signature. 261 270 - T 25-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 SMA_RS00785 fd89fecc21a79767576d7051461dde1d 432 PRINTS PR00145 Argininosuccinate lyase family signature 216 240 3.5E-9 T 25-04-2016 SMA_RS00785 fd89fecc21a79767576d7051461dde1d 432 PRINTS PR00145 Argininosuccinate lyase family signature 261 277 3.5E-9 T 25-04-2016 SMA_RS00785 fd89fecc21a79767576d7051461dde1d 432 PRINTS PR00145 Argininosuccinate lyase family signature 128 148 3.5E-9 T 25-04-2016 SMA_RS00785 fd89fecc21a79767576d7051461dde1d 432 Pfam PF10397 Adenylosuccinate lyase C-terminus 350 427 2.6E-25 T 25-04-2016 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 SMA_RS00785 fd89fecc21a79767576d7051461dde1d 432 PANTHER PTHR11444 4 424 4.5E-172 T 25-04-2016 IPR000362 Fumarate lyase family SMA_RS00785 fd89fecc21a79767576d7051461dde1d 432 Gene3D G3DSA:1.10.40.30 358 428 2.2E-34 T 25-04-2016 SMA_RS00785 fd89fecc21a79767576d7051461dde1d 432 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 1 428 1.0E-170 T 25-04-2016 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 SMA_RS00785 fd89fecc21a79767576d7051461dde1d 432 SMART SM00998 349 429 4.2E-40 T 25-04-2016 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 SMA_RS00785 fd89fecc21a79767576d7051461dde1d 432 Gene3D G3DSA:1.20.200.10 91 357 9.6E-89 T 25-04-2016 SMA_RS00785 fd89fecc21a79767576d7051461dde1d 432 SUPERFAMILY SSF48557 3 427 2.2E-135 T 25-04-2016 IPR008948 L-Aspartase-like GO:0003824 SMA_RS00785 fd89fecc21a79767576d7051461dde1d 432 Pfam PF00206 Lyase 7 286 1.2E-69 T 25-04-2016 IPR022761 Fumarate lyase, N-terminal SMA_RS00785 fd89fecc21a79767576d7051461dde1d 432 Gene3D G3DSA:1.10.275.10 2 90 8.4E-37 T 25-04-2016 IPR024083 Fumarase/histidase, N-terminal SMA_RS00785 fd89fecc21a79767576d7051461dde1d 432 PANTHER PTHR11444:SF2 4 424 4.5E-172 T 25-04-2016 SMA_RS00785 fd89fecc21a79767576d7051461dde1d 432 PRINTS PR00149 Fumarate lyase superfamily signature 88 106 1.3E-25 T 25-04-2016 IPR000362 Fumarate lyase family SMA_RS00785 fd89fecc21a79767576d7051461dde1d 432 PRINTS PR00149 Fumarate lyase superfamily signature 261 277 1.3E-25 T 25-04-2016 IPR000362 Fumarate lyase family SMA_RS00785 fd89fecc21a79767576d7051461dde1d 432 PRINTS PR00149 Fumarate lyase superfamily signature 133 151 1.3E-25 T 25-04-2016 IPR000362 Fumarate lyase family SMA_RS00785 fd89fecc21a79767576d7051461dde1d 432 PRINTS PR00149 Fumarate lyase superfamily signature 216 243 1.3E-25 T 25-04-2016 IPR000362 Fumarate lyase family SMA_RS05145 24fff1f465510dd2511feee36094c3e0 184 Pfam PF07155 ECF-type riboflavin transporter, S component 4 170 3.9E-21 T 25-04-2016 IPR009825 ECF transporter, substrate-specific component-like GO:0016020 SMA_RS04665 14378927220093360c52eb4f9a6c07d6 213 SUPERFAMILY SSF161098 10 195 2.62E-43 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SMA_RS04665 14378927220093360c52eb4f9a6c07d6 213 Gene3D G3DSA:1.10.3720.10 8 210 1.4E-49 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SMA_RS04665 14378927220093360c52eb4f9a6c07d6 213 PANTHER PTHR30614 1 213 1.3E-80 T 25-04-2016 SMA_RS04665 14378927220093360c52eb4f9a6c07d6 213 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 8 105 1.4E-29 T 25-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 SMA_RS04665 14378927220093360c52eb4f9a6c07d6 213 PANTHER PTHR30614:SF11 1 213 1.3E-80 T 25-04-2016 SMA_RS04665 14378927220093360c52eb4f9a6c07d6 213 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 30 208 1.4E-22 T 25-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SMA_RS04465 d99b1588838dbc62750910f8d5087a14 230 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 6 224 2.9E-62 T 25-04-2016 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 SMA_RS04465 d99b1588838dbc62750910f8d5087a14 230 PANTHER PTHR32119 1 229 3.3E-108 T 25-04-2016 SMA_RS04465 d99b1588838dbc62750910f8d5087a14 230 SUPERFAMILY SSF51366 2 229 3.53E-71 T 25-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 SMA_RS04465 d99b1588838dbc62750910f8d5087a14 230 SMART SM00934 5 224 1.2E-93 T 25-04-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 SMA_RS04465 d99b1588838dbc62750910f8d5087a14 230 PANTHER PTHR32119:SF2 1 229 3.3E-108 T 25-04-2016 SMA_RS04465 d99b1588838dbc62750910f8d5087a14 230 Hamap MF_01200_B Orotidine 5'-phosphate decarboxylase [pyrF]. 3 229 40.436 T 25-04-2016 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 SMA_RS04465 d99b1588838dbc62750910f8d5087a14 230 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 58 71 - T 25-04-2016 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 SMA_RS04465 d99b1588838dbc62750910f8d5087a14 230 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 6 224 5.1E-51 T 25-04-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 SMA_RS04465 d99b1588838dbc62750910f8d5087a14 230 Gene3D G3DSA:3.20.20.70 2 228 1.8E-84 T 25-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SMA_RS00935 f593d9999f51bf9bd90ccd3d29f20399 114 Gene3D G3DSA:3.30.420.10 2 89 1.5E-17 T 25-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMA_RS00935 f593d9999f51bf9bd90ccd3d29f20399 114 Pfam PF13683 Integrase core domain 23 88 3.5E-17 T 25-04-2016 IPR001584 Integrase, catalytic core GO:0015074 SMA_RS00935 f593d9999f51bf9bd90ccd3d29f20399 114 SUPERFAMILY SSF53098 2 90 3.79E-19 T 25-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMA_RS06755 96839368d6422daf31c949a4e9e22025 928 TIGRFAM TIGR03897 lanti_2_LanM: type 2 lantibiotic biosynthesis protein LanM 28 914 1.1E-131 T 25-04-2016 IPR017146 Type 2 lantibiotic biosynthesis protein LanM SMA_RS06755 96839368d6422daf31c949a4e9e22025 928 PIRSF PIRSF037228 1 928 1.4E-209 T 25-04-2016 IPR017146 Type 2 lantibiotic biosynthesis protein LanM SMA_RS06755 96839368d6422daf31c949a4e9e22025 928 Pfam PF13575 Domain of unknown function (DUF4135) 92 463 3.1E-66 T 25-04-2016 IPR025410 Domain of unknown function DUF4135 SMA_RS06755 96839368d6422daf31c949a4e9e22025 928 PRINTS PR01950 LanC-like protein superfamily signature 897 914 2.1E-10 T 25-04-2016 IPR007822 Lanthionine synthetase C-like SMA_RS06755 96839368d6422daf31c949a4e9e22025 928 PRINTS PR01950 LanC-like protein superfamily signature 728 744 2.1E-10 T 25-04-2016 IPR007822 Lanthionine synthetase C-like SMA_RS06755 96839368d6422daf31c949a4e9e22025 928 PRINTS PR01950 LanC-like protein superfamily signature 783 803 2.1E-10 T 25-04-2016 IPR007822 Lanthionine synthetase C-like SMA_RS06755 96839368d6422daf31c949a4e9e22025 928 PRINTS PR01950 LanC-like protein superfamily signature 584 602 2.1E-10 T 25-04-2016 IPR007822 Lanthionine synthetase C-like SMA_RS06755 96839368d6422daf31c949a4e9e22025 928 Pfam PF05147 Lanthionine synthetase C-like protein 581 920 1.9E-51 T 25-04-2016 IPR007822 Lanthionine synthetase C-like SMA_RS06755 96839368d6422daf31c949a4e9e22025 928 SUPERFAMILY SSF158745 558 919 7.85E-57 T 25-04-2016 SMA_RS06755 96839368d6422daf31c949a4e9e22025 928 SMART SM01260 581 925 4.8E-6 T 25-04-2016 IPR007822 Lanthionine synthetase C-like SMA_RS01650 a9e0974d244ab1573e61bb22bb5cb034 190 PANTHER PTHR41322 2 190 2.1E-45 T 25-04-2016 SMA_RS01650 a9e0974d244ab1573e61bb22bb5cb034 190 Pfam PF05066 HB1, ASXL, restriction endonuclease HTH domain 15 83 2.2E-7 T 25-04-2016 IPR007759 HB1/Asxl, restriction endonuclease HTH domain GO:0006351|GO:0006355 SMA_RS01650 a9e0974d244ab1573e61bb22bb5cb034 190 Hamap MF_00357 Probable DNA-directed RNA polymerase subunit delta [rpoE]. 9 189 15.645 T 25-04-2016 IPR029757 DNA-directed RNA polymerase subunit delta GO:0006351|GO:0006355 SMA_RS01650 a9e0974d244ab1573e61bb22bb5cb034 190 TIGRFAM TIGR04567 RNAP_delt_lowGC: DNA-directed RNA polymerase delta subunit 13 94 3.8E-29 T 25-04-2016 IPR029757 DNA-directed RNA polymerase subunit delta GO:0006351|GO:0006355 SMA_RS00755 0e8650ef2d7b79ad4b64773692f838ca 299 SUPERFAMILY SSF47413 3 67 1.18E-11 T 25-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SMA_RS00755 0e8650ef2d7b79ad4b64773692f838ca 299 SMART SM00530 7 63 2.2E-7 T 25-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SMA_RS00755 0e8650ef2d7b79ad4b64773692f838ca 299 Gene3D G3DSA:1.10.260.40 4 114 1.6E-15 T 25-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SMA_RS00755 0e8650ef2d7b79ad4b64773692f838ca 299 Pfam PF01381 Helix-turn-helix 8 63 4.6E-8 T 25-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SMA_RS02250 0133fb0ee561836635d126b389f17496 67 Gene3D G3DSA:3.30.70.100 2 58 1.5E-17 T 25-04-2016 SMA_RS02250 0133fb0ee561836635d126b389f17496 67 ProSitePatterns PS01047 Heavy-metal-associated domain. 7 36 - T 25-04-2016 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 SMA_RS02250 0133fb0ee561836635d126b389f17496 67 SUPERFAMILY SSF55008 1 61 1.83E-14 T 25-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 SMA_RS02250 0133fb0ee561836635d126b389f17496 67 Pfam PF00403 Heavy-metal-associated domain 4 59 5.2E-16 T 25-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 SMA_RS02975 ee6694b65358a63875a15c43a5f4ae8e 129 SMART SM00450 32 128 4.4E-14 T 25-04-2016 IPR001763 Rhodanese-like domain SMA_RS02975 ee6694b65358a63875a15c43a5f4ae8e 129 SUPERFAMILY SSF52821 11 124 2.23E-24 T 25-04-2016 IPR001763 Rhodanese-like domain SMA_RS02975 ee6694b65358a63875a15c43a5f4ae8e 129 Gene3D G3DSA:3.40.250.10 14 124 3.2E-23 T 25-04-2016 IPR001763 Rhodanese-like domain SMA_RS02975 ee6694b65358a63875a15c43a5f4ae8e 129 Pfam PF00581 Rhodanese-like domain 37 123 5.0E-14 T 25-04-2016 IPR001763 Rhodanese-like domain SMA_RS05525 eac1d869680b7bd9240de5263c63a67b 75 SUPERFAMILY SSF51735 4 74 2.94E-11 T 25-04-2016 IPR016040 NAD(P)-binding domain SMA_RS05525 eac1d869680b7bd9240de5263c63a67b 75 Gene3D G3DSA:3.40.50.720 2 72 2.6E-12 T 25-04-2016 IPR016040 NAD(P)-binding domain SMA_RS05525 eac1d869680b7bd9240de5263c63a67b 75 Pfam PF00106 short chain dehydrogenase 6 72 2.7E-8 T 25-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SMA_RS02960 120e57096d5c41d42215e4da6bc72b2f 176 SUPERFAMILY SSF47240 27 167 2.68E-37 T 25-04-2016 IPR009078 Ferritin-like superfamily SMA_RS02960 120e57096d5c41d42215e4da6bc72b2f 176 PANTHER PTHR30295:SF6 7 173 7.6E-41 T 25-04-2016 SMA_RS02960 120e57096d5c41d42215e4da6bc72b2f 176 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 50 66 2.1E-12 T 25-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 SMA_RS02960 120e57096d5c41d42215e4da6bc72b2f 176 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 74 90 2.1E-12 T 25-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 SMA_RS02960 120e57096d5c41d42215e4da6bc72b2f 176 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 147 165 2.1E-12 T 25-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 SMA_RS02960 120e57096d5c41d42215e4da6bc72b2f 176 Pfam PF00210 Ferritin-like domain 30 170 3.0E-26 T 25-04-2016 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 SMA_RS02960 120e57096d5c41d42215e4da6bc72b2f 176 PANTHER PTHR30295 7 173 7.6E-41 T 25-04-2016 SMA_RS02960 120e57096d5c41d42215e4da6bc72b2f 176 Gene3D G3DSA:1.20.1260.10 21 173 4.8E-49 T 25-04-2016 IPR012347 Ferritin-related SMA_RS02960 120e57096d5c41d42215e4da6bc72b2f 176 ProSitePatterns PS00818 Dps protein family signature 1. 50 66 - T 25-04-2016 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 SMA_RS02960 120e57096d5c41d42215e4da6bc72b2f 176 PIRSF PIRSF005900 9 175 7.3E-41 T 25-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 SMA_RS03835 7493eefefad96a9286493c4ec7ca3306 381 SUPERFAMILY SSF51726 8 380 6.28E-55 T 25-04-2016 SMA_RS03835 7493eefefad96a9286493c4ec7ca3306 381 PANTHER PTHR30519:SF3 9 381 7.2E-59 T 25-04-2016 SMA_RS03835 7493eefefad96a9286493c4ec7ca3306 381 Gene3D G3DSA:3.20.20.210 6 381 6.6E-82 T 25-04-2016 SMA_RS03835 7493eefefad96a9286493c4ec7ca3306 381 PANTHER PTHR30519 9 381 7.2E-59 T 25-04-2016 SMA_RS10385 18b5dd88d77a7e0da501abe355318305 197 Pfam PF01476 LysM domain 37 77 1.1E-11 T 25-04-2016 IPR018392 LysM domain SMA_RS10385 18b5dd88d77a7e0da501abe355318305 197 SUPERFAMILY SSF54106 36 79 3.53E-10 T 25-04-2016 IPR018392 LysM domain SMA_RS10385 18b5dd88d77a7e0da501abe355318305 197 SMART SM00257 36 80 3.0E-12 T 25-04-2016 IPR018392 LysM domain SMA_RS10385 18b5dd88d77a7e0da501abe355318305 197 Gene3D G3DSA:1.10.530.10 105 158 4.8E-4 T 25-04-2016 SMA_RS10385 18b5dd88d77a7e0da501abe355318305 197 Gene3D G3DSA:3.10.350.10 37 77 8.2E-15 T 25-04-2016 IPR018392 LysM domain SMA_RS04875 2cf3e1519dbc0742fde207ce18c368c8 325 Pfam PF04245 37-kD nucleoid-associated bacterial protein 10 321 6.6E-37 T 25-04-2016 IPR007358 Nucleoid-associated protein NdpA GO:0009295 SMA_RS05795 d8139c2bba2a5357a3c8b71fc2037294 208 Pfam PF06912 Protein of unknown function (DUF1275) 9 204 2.2E-22 T 25-04-2016 IPR010699 Protein of unknown function DUF1275 SMA_RS07020 6d3299a0357d9b6a439a3152cd0cd698 477 PANTHER PTHR33392:SF6 82 473 1.0E-75 T 25-04-2016 SMA_RS07020 6d3299a0357d9b6a439a3152cd0cd698 477 TIGRFAM TIGR00350 lytR_cpsA_psr: cell envelope-related function transcriptional attenuator common domain 217 394 6.5E-26 T 25-04-2016 IPR004474 Cell envelope-related transcriptional attenuator domain SMA_RS07020 6d3299a0357d9b6a439a3152cd0cd698 477 PANTHER PTHR33392 82 473 1.0E-75 T 25-04-2016 SMA_RS07020 6d3299a0357d9b6a439a3152cd0cd698 477 Pfam PF03816 Cell envelope-related transcriptional attenuator domain 218 394 8.2E-50 T 25-04-2016 IPR004474 Cell envelope-related transcriptional attenuator domain SMA_RS07890 b316cc4dec1a3991f5d3ddb7b3da2aab 278 PANTHER PTHR11071 19 198 1.5E-90 T 25-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 SMA_RS07890 b316cc4dec1a3991f5d3ddb7b3da2aab 278 PANTHER PTHR11071 221 278 1.5E-90 T 25-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 SMA_RS07890 b316cc4dec1a3991f5d3ddb7b3da2aab 278 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 179 194 3.4E-14 T 25-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 SMA_RS07890 b316cc4dec1a3991f5d3ddb7b3da2aab 278 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 128 140 3.4E-14 T 25-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 SMA_RS07890 b316cc4dec1a3991f5d3ddb7b3da2aab 278 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 102 117 3.4E-14 T 25-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 SMA_RS07890 b316cc4dec1a3991f5d3ddb7b3da2aab 278 SUPERFAMILY SSF50891 89 274 6.43E-57 T 25-04-2016 IPR029000 Cyclophilin-like domain SMA_RS07890 b316cc4dec1a3991f5d3ddb7b3da2aab 278 PANTHER PTHR11071:SF282 19 198 1.5E-90 T 25-04-2016 SMA_RS07890 b316cc4dec1a3991f5d3ddb7b3da2aab 278 PANTHER PTHR11071:SF282 221 278 1.5E-90 T 25-04-2016 SMA_RS07890 b316cc4dec1a3991f5d3ddb7b3da2aab 278 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 89 271 1.9E-49 T 25-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 SMA_RS07890 b316cc4dec1a3991f5d3ddb7b3da2aab 278 Gene3D G3DSA:2.40.100.10 83 274 4.2E-65 T 25-04-2016 IPR029000 Cyclophilin-like domain SMA_RS02010 5c0ed550a96b630438bdb51f1cd7243b 161 SUPERFAMILY SSF88946 3 83 1.28E-5 T 25-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMA_RS00010 6aea00367a568931bd8e5442f0404308 378 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 3 126 7.7E-24 T 25-04-2016 IPR022634 DNA polymerase III, beta chain, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SMA_RS00010 6aea00367a568931bd8e5442f0404308 378 SUPERFAMILY SSF55979 254 377 1.06E-28 T 25-04-2016 SMA_RS00010 6aea00367a568931bd8e5442f0404308 378 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 2 377 1.2E-87 T 25-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SMA_RS00010 6aea00367a568931bd8e5442f0404308 378 Gene3D G3DSA:3.10.150.10 135 254 1.2E-30 T 25-04-2016 SMA_RS00010 6aea00367a568931bd8e5442f0404308 378 PANTHER PTHR30478 3 378 9.6E-112 T 25-04-2016 SMA_RS00010 6aea00367a568931bd8e5442f0404308 378 SMART SM00480 18 373 6.0E-141 T 25-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SMA_RS00010 6aea00367a568931bd8e5442f0404308 378 Pfam PF02767 DNA polymerase III beta subunit, central domain 137 251 1.0E-28 T 25-04-2016 IPR022637 DNA polymerase III, beta chain, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SMA_RS00010 6aea00367a568931bd8e5442f0404308 378 Gene3D G3DSA:3.10.150.10 3 129 2.5E-21 T 25-04-2016 SMA_RS00010 6aea00367a568931bd8e5442f0404308 378 PIRSF PIRSF000804 2 378 9.5E-95 T 25-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SMA_RS00010 6aea00367a568931bd8e5442f0404308 378 SUPERFAMILY SSF55979 3 127 3.3E-17 T 25-04-2016 SMA_RS00010 6aea00367a568931bd8e5442f0404308 378 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 254 375 1.3E-25 T 25-04-2016 IPR022635 DNA polymerase III, beta chain, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SMA_RS00010 6aea00367a568931bd8e5442f0404308 378 Gene3D G3DSA:3.10.150.10 259 378 1.6E-32 T 25-04-2016 SMA_RS00010 6aea00367a568931bd8e5442f0404308 378 SUPERFAMILY SSF55979 134 251 2.56E-22 T 25-04-2016 SMA_RS01810 8d7d6991c3160c904b931b4cff64451a 181 SUPERFAMILY SSF102405 2 178 4.27E-48 T 25-04-2016 SMA_RS01810 8d7d6991c3160c904b931b4cff64451a 181 Gene3D G3DSA:3.40.50.450 2 175 2.9E-50 T 25-04-2016 SMA_RS01810 8d7d6991c3160c904b931b4cff64451a 181 PANTHER PTHR31223 2 181 1.2E-62 T 25-04-2016 SMA_RS01810 8d7d6991c3160c904b931b4cff64451a 181 PANTHER PTHR31223:SF0 2 181 1.2E-62 T 25-04-2016 SMA_RS01810 8d7d6991c3160c904b931b4cff64451a 181 Pfam PF03641 Possible lysine decarboxylase 45 170 1.7E-30 T 25-04-2016 IPR031100 LOG family SMA_RS01810 8d7d6991c3160c904b931b4cff64451a 181 TIGRFAM TIGR00730 TIGR00730: TIGR00730 family protein 3 178 4.4E-40 T 25-04-2016 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG SMA_RS08245 352066d7e8585a7947c536e1a502ecc9 137 Pfam PF00892 EamA-like transporter family 2 136 1.3E-23 T 25-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 SMA_RS08245 352066d7e8585a7947c536e1a502ecc9 137 PANTHER PTHR22911 1 137 5.6E-24 T 25-04-2016 SMA_RS08245 352066d7e8585a7947c536e1a502ecc9 137 SUPERFAMILY SSF103481 62 136 1.57E-16 T 25-04-2016 SMA_RS08245 352066d7e8585a7947c536e1a502ecc9 137 PANTHER PTHR22911:SF44 1 137 5.6E-24 T 25-04-2016 SMA_RS04350 9b951a158a81131bc3180b54c5cada80 262 Pfam PF09659 CRISPR-associated protein (Cas_Csm6) 6 251 1.1E-25 T 25-04-2016 IPR013489 CRISPR-associated protein Csm6 SMA_RS05850 eb0c29a29bcb128dcc6d859b1432e403 218 Pfam PF03006 Haemolysin-III related 16 210 5.5E-30 T 25-04-2016 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 SMA_RS05850 eb0c29a29bcb128dcc6d859b1432e403 218 TIGRFAM TIGR01065 hlyIII: channel protein, hemolysin III family 17 217 9.1E-61 T 25-04-2016 IPR005744 Hly-III GO:0016021|GO:0019835 SMA_RS05850 eb0c29a29bcb128dcc6d859b1432e403 218 PANTHER PTHR20855 17 218 1.4E-52 T 25-04-2016 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 SMA_RS05850 eb0c29a29bcb128dcc6d859b1432e403 218 PANTHER PTHR20855:SF3 17 218 1.4E-52 T 25-04-2016 IPR005744 Hly-III GO:0016021|GO:0019835 SMA_RS08840 9b4134a0131b593cc6ca2a8518b40bb4 69 SMART SM00530 7 63 0.0012 T 25-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SMA_RS08840 9b4134a0131b593cc6ca2a8518b40bb4 69 SUPERFAMILY SSF47413 4 68 8.04E-18 T 25-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SMA_RS08840 9b4134a0131b593cc6ca2a8518b40bb4 69 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 7 67 2.3E-21 T 25-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SMA_RS08840 9b4134a0131b593cc6ca2a8518b40bb4 69 PANTHER PTHR37301 3 69 5.4E-26 T 25-04-2016 SMA_RS08840 9b4134a0131b593cc6ca2a8518b40bb4 69 Gene3D G3DSA:1.10.260.40 2 66 2.1E-15 T 25-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SMA_RS02690 345560b3a8ccda67aaae50390d006c36 145 Gene3D G3DSA:3.40.50.360 5 143 2.1E-38 T 25-04-2016 IPR029039 Flavoprotein-like domain SMA_RS02690 345560b3a8ccda67aaae50390d006c36 145 Pfam PF07972 NrdI Flavodoxin like 6 143 2.0E-38 T 25-04-2016 IPR004465 Ribonucleotide reductase Class Ib, NrdI SMA_RS02690 345560b3a8ccda67aaae50390d006c36 145 PANTHER PTHR37297 3 145 7.6E-29 T 25-04-2016 SMA_RS02690 345560b3a8ccda67aaae50390d006c36 145 SUPERFAMILY SSF52218 3 139 4.19E-15 T 25-04-2016 IPR029039 Flavoprotein-like domain SMA_RS02690 345560b3a8ccda67aaae50390d006c36 145 PIRSF PIRSF005087 2 145 2.9E-37 T 25-04-2016 IPR004465 Ribonucleotide reductase Class Ib, NrdI SMA_RS02690 345560b3a8ccda67aaae50390d006c36 145 PANTHER PTHR37297:SF1 3 145 7.6E-29 T 25-04-2016 SMA_RS06260 ae08490453061c0f3775f8f4e5791e96 104 PANTHER PTHR21349 4 102 4.3E-41 T 25-04-2016 SMA_RS06260 ae08490453061c0f3775f8f4e5791e96 104 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 3 104 25.385 T 25-04-2016 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS06260 ae08490453061c0f3775f8f4e5791e96 104 TIGRFAM TIGR00061 L21: ribosomal protein bL21 4 102 1.2E-35 T 25-04-2016 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS06260 ae08490453061c0f3775f8f4e5791e96 104 Pfam PF00829 Ribosomal prokaryotic L21 protein 4 102 3.0E-37 T 25-04-2016 IPR028909 Ribosomal protein L21-like GO:0005840 SMA_RS06260 ae08490453061c0f3775f8f4e5791e96 104 ProSitePatterns PS01169 Ribosomal protein L21 signature. 73 95 - T 25-04-2016 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS06260 ae08490453061c0f3775f8f4e5791e96 104 SUPERFAMILY SSF141091 4 103 1.18E-36 T 25-04-2016 IPR028909 Ribosomal protein L21-like GO:0005840 SMA_RS07460 ef4f35c719c6cb551fe1db04d36d4c78 328 Gene3D G3DSA:3.40.80.10 163 301 3.2E-10 T 25-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 SMA_RS07460 ef4f35c719c6cb551fe1db04d36d4c78 328 SMART SM00644 154 297 4.6E-26 T 25-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 SMA_RS07460 ef4f35c719c6cb551fe1db04d36d4c78 328 SUPERFAMILY SSF55846 162 310 1.7E-28 T 25-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 SMA_RS07460 ef4f35c719c6cb551fe1db04d36d4c78 328 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 167 282 1.1E-6 T 25-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 SMA_RS01225 41e055b4e22e02269cc5a30978a31ede 298 PANTHER PTHR11122:SF14 201 297 4.9E-36 T 25-04-2016 SMA_RS01225 41e055b4e22e02269cc5a30978a31ede 298 PANTHER PTHR11122:SF14 74 169 4.9E-36 T 25-04-2016 SMA_RS01225 41e055b4e22e02269cc5a30978a31ede 298 PANTHER PTHR11122:SF14 1 58 4.9E-36 T 25-04-2016 SMA_RS01225 41e055b4e22e02269cc5a30978a31ede 298 Pfam PF01263 Aldose 1-epimerase 2 262 7.7E-30 T 25-04-2016 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 SMA_RS01225 41e055b4e22e02269cc5a30978a31ede 298 PANTHER PTHR11122 201 297 4.9E-36 T 25-04-2016 SMA_RS01225 41e055b4e22e02269cc5a30978a31ede 298 PANTHER PTHR11122 74 169 4.9E-36 T 25-04-2016 SMA_RS01225 41e055b4e22e02269cc5a30978a31ede 298 PANTHER PTHR11122 1 58 4.9E-36 T 25-04-2016 SMA_RS01225 41e055b4e22e02269cc5a30978a31ede 298 SUPERFAMILY SSF74650 2 296 1.26E-43 T 25-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 SMA_RS01225 41e055b4e22e02269cc5a30978a31ede 298 Gene3D G3DSA:2.70.98.10 2 253 1.1E-15 T 25-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 SMA_RS05565 fbc1ea1690f7297e779a1b144fa3d2b8 510 PRINTS PR00762 Chloride channel signature 331 351 3.6E-21 T 25-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 SMA_RS05565 fbc1ea1690f7297e779a1b144fa3d2b8 510 PRINTS PR00762 Chloride channel signature 366 382 3.6E-21 T 25-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 SMA_RS05565 fbc1ea1690f7297e779a1b144fa3d2b8 510 PRINTS PR00762 Chloride channel signature 83 100 3.6E-21 T 25-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 SMA_RS05565 fbc1ea1690f7297e779a1b144fa3d2b8 510 PRINTS PR00762 Chloride channel signature 384 403 3.6E-21 T 25-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 SMA_RS05565 fbc1ea1690f7297e779a1b144fa3d2b8 510 PRINTS PR00762 Chloride channel signature 163 182 3.6E-21 T 25-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 SMA_RS05565 fbc1ea1690f7297e779a1b144fa3d2b8 510 PANTHER PTHR11689:SF96 11 451 8.0E-76 T 25-04-2016 SMA_RS05565 fbc1ea1690f7297e779a1b144fa3d2b8 510 SUPERFAMILY SSF116726 443 508 2.22E-5 T 25-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SMA_RS05565 fbc1ea1690f7297e779a1b144fa3d2b8 510 Pfam PF00654 Voltage gated chloride channel 72 416 3.3E-82 T 25-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 SMA_RS05565 fbc1ea1690f7297e779a1b144fa3d2b8 510 Gene3D G3DSA:1.10.3080.10 4 434 8.1E-81 T 25-04-2016 IPR014743 Chloride channel, core GO:0005216|GO:0055085 SMA_RS05565 fbc1ea1690f7297e779a1b144fa3d2b8 510 SUPERFAMILY SSF81340 4 434 2.09E-100 T 25-04-2016 IPR014743 Chloride channel, core GO:0005216|GO:0055085 SMA_RS05565 fbc1ea1690f7297e779a1b144fa3d2b8 510 PANTHER PTHR11689 11 451 8.0E-76 T 25-04-2016 SMA_RS06090 d4f1603dd11f12cdbbb96dbbf598798e 126 PIRSF PIRSF031568 1 126 2.1E-60 T 25-04-2016 IPR009530 Protein of unknown function DUF1149 SMA_RS06090 d4f1603dd11f12cdbbb96dbbf598798e 126 Pfam PF06619 Protein of unknown function (DUF1149) 1 124 7.1E-50 T 25-04-2016 IPR009530 Protein of unknown function DUF1149 SMA_RS06090 d4f1603dd11f12cdbbb96dbbf598798e 126 SUPERFAMILY SSF54611 1 124 2.09E-50 T 25-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 SMA_RS06090 d4f1603dd11f12cdbbb96dbbf598798e 126 Gene3D G3DSA:3.10.420.10 1 124 1.1E-54 T 25-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 SMA_RS05810 8d588ee3b4d425529cedaae1e08e5148 197 SUPERFAMILY SSF52540 21 195 4.01E-40 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS05810 8d588ee3b4d425529cedaae1e08e5148 197 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 11 193 2.6E-73 T 25-04-2016 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0000917|GO:0005525 SMA_RS05810 8d588ee3b4d425529cedaae1e08e5148 197 Gene3D G3DSA:3.40.50.300 9 195 5.3E-46 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS05810 8d588ee3b4d425529cedaae1e08e5148 197 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 28 170 1.6E-12 T 25-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 SMA_RS05810 8d588ee3b4d425529cedaae1e08e5148 197 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 15 197 28.931 T 25-04-2016 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0000917|GO:0005525 SMA_RS05810 8d588ee3b4d425529cedaae1e08e5148 197 PANTHER PTHR11649 13 197 3.4E-52 T 25-04-2016 SMA_RS05810 8d588ee3b4d425529cedaae1e08e5148 197 Pfam PF01926 50S ribosome-binding GTPase 29 147 2.2E-21 T 25-04-2016 IPR006073 GTP binding domain GO:0005525 SMA_RS06415 1e2adedbac2af59b43882c608c3b5f16 678 SUPERFAMILY SSF53756 355 675 5.76E-24 T 25-04-2016 SMA_RS06415 1e2adedbac2af59b43882c608c3b5f16 678 Pfam PF13692 Glycosyl transferases group 1 511 637 4.3E-13 T 25-04-2016 SMA_RS06415 1e2adedbac2af59b43882c608c3b5f16 678 Pfam PF05045 Rhamnan synthesis protein F 95 331 1.5E-57 T 25-04-2016 IPR007739 Rhamnan synthesis F SMA_RS07230 a5d657fc06c162829d353b2f858d00a0 574 PANTHER PTHR41314 3 574 1.9E-143 T 25-04-2016 SMA_RS07230 a5d657fc06c162829d353b2f858d00a0 574 Pfam PF06160 Septation ring formation regulator, EzrA 9 565 8.1E-184 T 25-04-2016 IPR010379 Septation ring formation regulator EzrA GO:0000921|GO:0005940|GO:0016021 SMA_RS07230 a5d657fc06c162829d353b2f858d00a0 574 Hamap MF_00728 Septation ring formation regulator EzrA [ezrA]. 6 568 26.368 T 25-04-2016 IPR010379 Septation ring formation regulator EzrA GO:0000921|GO:0005940|GO:0016021 SMA_RS03310 abf3e0743624b36b84276a290a79718c 345 SUPERFAMILY SSF52540 5 210 7.82E-15 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS03310 abf3e0743624b36b84276a290a79718c 345 PANTHER PTHR34388 1 343 7.0E-55 T 25-04-2016 SMA_RS03310 abf3e0743624b36b84276a290a79718c 345 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 17 341 1.7E-79 T 25-04-2016 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 SMA_RS03310 abf3e0743624b36b84276a290a79718c 345 Gene3D G3DSA:1.20.272.20 225 327 2.7E-5 T 25-04-2016 SMA_RS03310 abf3e0743624b36b84276a290a79718c 345 Gene3D G3DSA:3.40.50.300 2 134 2.3E-5 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS03310 abf3e0743624b36b84276a290a79718c 345 Gene3D G3DSA:1.10.8.60 147 224 2.0E-5 T 25-04-2016 SMA_RS03310 abf3e0743624b36b84276a290a79718c 345 SUPERFAMILY SSF48019 216 343 9.35E-22 T 25-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 SMA_RS03310 abf3e0743624b36b84276a290a79718c 345 Pfam PF06144 DNA polymerase III, delta subunit 20 192 5.1E-47 T 25-04-2016 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 SMA_RS10675 d49db77e0e783128bf42a45bdfaa6d7c 65 Gene3D G3DSA:3.40.190.10 1 43 4.8E-11 T 25-04-2016 SMA_RS10675 d49db77e0e783128bf42a45bdfaa6d7c 65 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 1 62 6.8E-10 T 25-04-2016 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 SMA_RS10675 d49db77e0e783128bf42a45bdfaa6d7c 65 SUPERFAMILY SSF53850 1 64 3.53E-15 T 25-04-2016 SMA_RS04940 ff17d3222bc8a1dd1dd46e75124d1c40 356 Pfam PF01935 Domain of unknown function DUF87 131 172 1.3E-5 T 25-04-2016 IPR002789 Helicase HerA, central domain SMA_RS04940 ff17d3222bc8a1dd1dd46e75124d1c40 356 Gene3D G3DSA:3.40.50.300 102 310 2.1E-15 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS04940 ff17d3222bc8a1dd1dd46e75124d1c40 356 SUPERFAMILY SSF52540 129 321 2.18E-14 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS05845 2eaa85d5e344b5dc213dda64e4d036a1 147 Pfam PF08876 Domain of unknown function (DUF1836) 6 104 1.7E-36 T 25-04-2016 IPR014975 Protein of unknown function DUF1836 SMA_RS05845 2eaa85d5e344b5dc213dda64e4d036a1 147 PANTHER PTHR40056 2 133 4.0E-24 T 25-04-2016 SMA_RS05845 2eaa85d5e344b5dc213dda64e4d036a1 147 PANTHER PTHR40056:SF1 2 133 4.0E-24 T 25-04-2016 SMA_RS05845 2eaa85d5e344b5dc213dda64e4d036a1 147 Gene3D G3DSA:1.10.1660.10 37 100 3.1E-5 T 25-04-2016 SMA_RS04955 a7fd30ca79a3f8647b4d3eb61f30bf94 68 Pfam PF11372 Domain of unknown function (DUF3173) 5 58 1.3E-18 T 25-04-2016 IPR021512 Protein of unknown function DUF3173 SMA_RS09780 6c8a7fcdfb44d1bad6cf0577e3b989dd 133 Pfam PF11457 Protein of unknown function (DUF3021) 7 127 1.9E-23 T 25-04-2016 IPR021560 Protein of unknown function DUF3021 SMA_RS05905 f67b3ea33167b0feffb79c3885349854 333 Gene3D G3DSA:3.20.20.210 3 330 6.4E-27 T 25-04-2016 SMA_RS05905 f67b3ea33167b0feffb79c3885349854 333 SUPERFAMILY SSF51726 1 331 4.32E-40 T 25-04-2016 SMA_RS05905 f67b3ea33167b0feffb79c3885349854 333 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 99 330 4.3E-11 T 25-04-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 SMA_RS03565 33113e34b66d3307bc6a1c68dc48f4a1 238 PRINTS PR01002 Flagellar protein FlgJ signature 129 150 2.2E-5 T 25-04-2016 SMA_RS03565 33113e34b66d3307bc6a1c68dc48f4a1 238 PRINTS PR01002 Flagellar protein FlgJ signature 69 87 2.2E-5 T 25-04-2016 SMA_RS03565 33113e34b66d3307bc6a1c68dc48f4a1 238 PRINTS PR01002 Flagellar protein FlgJ signature 171 189 2.2E-5 T 25-04-2016 SMA_RS03565 33113e34b66d3307bc6a1c68dc48f4a1 238 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 56 189 1.0E-18 T 25-04-2016 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 SMA_RS03565 33113e34b66d3307bc6a1c68dc48f4a1 238 SMART SM00047 40 194 3.8E-42 T 25-04-2016 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 SMA_RS03565 33113e34b66d3307bc6a1c68dc48f4a1 238 PANTHER PTHR33308:SF3 47 205 2.5E-19 T 25-04-2016 SMA_RS03565 33113e34b66d3307bc6a1c68dc48f4a1 238 PANTHER PTHR33308 47 205 2.5E-19 T 25-04-2016 SMA_RS09160 8a7763c508993855c68f43578b9cc2f5 448 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 8 446 1.1E-169 T 25-04-2016 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 SMA_RS09160 8a7763c508993855c68f43578b9cc2f5 448 SUPERFAMILY SSF55931 107 446 4.81E-124 T 25-04-2016 SMA_RS09160 8a7763c508993855c68f43578b9cc2f5 448 PANTHER PTHR20852 1 448 1.2E-188 T 25-04-2016 SMA_RS09160 8a7763c508993855c68f43578b9cc2f5 448 SMART SM01230 106 358 1.1E-130 T 25-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 SMA_RS09160 8a7763c508993855c68f43578b9cc2f5 448 ProSitePatterns PS00180 Glutamine synthetase signature 1. 53 71 - T 25-04-2016 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 SMA_RS09160 8a7763c508993855c68f43578b9cc2f5 448 PANTHER PTHR20852:SF7 1 448 1.2E-188 T 25-04-2016 SMA_RS09160 8a7763c508993855c68f43578b9cc2f5 448 Gene3D G3DSA:3.10.20.70 5 109 6.8E-36 T 25-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 SMA_RS09160 8a7763c508993855c68f43578b9cc2f5 448 Gene3D G3DSA:3.30.590.10 110 434 2.7E-124 T 25-04-2016 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Reactome: REACT_13 SMA_RS09160 8a7763c508993855c68f43578b9cc2f5 448 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 16 99 8.6E-27 T 25-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 SMA_RS09160 8a7763c508993855c68f43578b9cc2f5 448 Pfam PF00120 Glutamine synthetase, catalytic domain 107 444 1.2E-138 T 25-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 SMA_RS09160 8a7763c508993855c68f43578b9cc2f5 448 SUPERFAMILY SSF54368 4 105 2.62E-28 T 25-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 SMA_RS06015 976efb52dbb4de7f2d475a9010b74e61 146 SUPERFAMILY SSF46785 7 141 1.56E-25 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMA_RS06015 976efb52dbb4de7f2d475a9010b74e61 146 PANTHER PTHR33164 7 143 1.8E-13 T 25-04-2016 SMA_RS06015 976efb52dbb4de7f2d475a9010b74e61 146 Pfam PF12802 MarR family 40 91 5.0E-10 T 25-04-2016 SMA_RS06015 976efb52dbb4de7f2d475a9010b74e61 146 ProSitePatterns PS01117 MarR-type HTH domain signature. 66 101 - T 25-04-2016 IPR023187 Transcriptional regulator MarR-type, conserved site SMA_RS06015 976efb52dbb4de7f2d475a9010b74e61 146 Gene3D G3DSA:1.10.10.10 2 142 1.4E-34 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMA_RS06015 976efb52dbb4de7f2d475a9010b74e61 146 SMART SM00347 26 128 1.8E-12 T 25-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SMA_RS00915 e4b35fc28e71082b6ac1f17a0aaa16c3 286 PANTHER PTHR11079 40 276 2.6E-52 T 25-04-2016 SMA_RS00915 e4b35fc28e71082b6ac1f17a0aaa16c3 286 PANTHER PTHR11079:SF91 40 276 2.6E-52 T 25-04-2016 SMA_RS00915 e4b35fc28e71082b6ac1f17a0aaa16c3 286 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 126 140 - T 25-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 SMA_RS00915 e4b35fc28e71082b6ac1f17a0aaa16c3 286 Pfam PF00849 RNA pseudouridylate synthase 89 235 3.4E-31 T 25-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 SMA_RS00915 e4b35fc28e71082b6ac1f17a0aaa16c3 286 SUPERFAMILY SSF55120 82 277 1.39E-58 T 25-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 SMA_RS08660 a1f9ef8a4b2ec8f0859ff96967c664d4 302 PANTHER PTHR22911:SF65 1 295 2.1E-58 T 25-04-2016 SMA_RS08660 a1f9ef8a4b2ec8f0859ff96967c664d4 302 SUPERFAMILY SSF103481 42 148 4.97E-10 T 25-04-2016 SMA_RS08660 a1f9ef8a4b2ec8f0859ff96967c664d4 302 SUPERFAMILY SSF103481 195 293 3.4E-10 T 25-04-2016 SMA_RS08660 a1f9ef8a4b2ec8f0859ff96967c664d4 302 Pfam PF00892 EamA-like transporter family 6 144 3.7E-18 T 25-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 SMA_RS08660 a1f9ef8a4b2ec8f0859ff96967c664d4 302 Pfam PF00892 EamA-like transporter family 157 290 3.7E-18 T 25-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 SMA_RS08660 a1f9ef8a4b2ec8f0859ff96967c664d4 302 PANTHER PTHR22911 1 295 2.1E-58 T 25-04-2016 SMA_RS04420 c14dc2b4d7502e1c5385c17994c15063 309 PANTHER PTHR22916:SF9 186 273 1.9E-23 T 25-04-2016 SMA_RS04420 c14dc2b4d7502e1c5385c17994c15063 309 PANTHER PTHR22916:SF9 83 164 1.9E-23 T 25-04-2016 SMA_RS04420 c14dc2b4d7502e1c5385c17994c15063 309 PANTHER PTHR22916:SF9 1 59 1.9E-23 T 25-04-2016 SMA_RS04420 c14dc2b4d7502e1c5385c17994c15063 309 Gene3D G3DSA:3.90.550.10 30 262 2.7E-23 T 25-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SMA_RS04420 c14dc2b4d7502e1c5385c17994c15063 309 PANTHER PTHR22916 186 273 1.9E-23 T 25-04-2016 SMA_RS04420 c14dc2b4d7502e1c5385c17994c15063 309 PANTHER PTHR22916 83 164 1.9E-23 T 25-04-2016 SMA_RS04420 c14dc2b4d7502e1c5385c17994c15063 309 PANTHER PTHR22916 1 59 1.9E-23 T 25-04-2016 SMA_RS04420 c14dc2b4d7502e1c5385c17994c15063 309 SUPERFAMILY SSF53448 32 293 8.44E-30 T 25-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SMA_RS08880 f6a861cf910b321f5d7daca6c14825fa 333 PIRSF PIRSF007023 1 331 1.5E-46 T 25-04-2016 IPR016503 UDP-galactofuranosyltransferase GO:0016757 SMA_RS08530 deff019dfd994fe44988602f7416765f 457 PANTHER PTHR30588:SF0 1 456 8.6E-130 T 25-04-2016 SMA_RS08530 deff019dfd994fe44988602f7416765f 457 Pfam PF05525 Branched-chain amino acid transport protein 8 454 8.6E-143 T 25-04-2016 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 SMA_RS08530 deff019dfd994fe44988602f7416765f 457 TIGRFAM TIGR00796 livcs: branched-chain amino acid transport system II carrier protein 12 438 3.3E-111 T 25-04-2016 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 SMA_RS08530 deff019dfd994fe44988602f7416765f 457 PANTHER PTHR30588 1 456 8.6E-130 T 25-04-2016 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 SMA_RS04185 0c04a04e4ca9f5f09673dd53482527d6 152 Pfam PF11391 Protein of unknown function (DUF2798) 88 140 9.3E-6 T 25-04-2016 IPR021529 Protein of unknown function DUF2798 SMA_RS01085 0c6fee100ebe3ee2b5fec86df4217e23 345 Gene3D G3DSA:3.40.630.10 2 69 2.0E-59 T 25-04-2016 SMA_RS01085 0c6fee100ebe3ee2b5fec86df4217e23 345 Gene3D G3DSA:3.40.630.10 167 341 2.0E-59 T 25-04-2016 SMA_RS01085 0c6fee100ebe3ee2b5fec86df4217e23 345 PANTHER PTHR32481:SF7 1 344 1.8E-189 T 25-04-2016 SMA_RS01085 0c6fee100ebe3ee2b5fec86df4217e23 345 SUPERFAMILY SSF53187 178 341 8.38E-53 T 25-04-2016 SMA_RS01085 0c6fee100ebe3ee2b5fec86df4217e23 345 SUPERFAMILY SSF53187 3 82 8.38E-53 T 25-04-2016 SMA_RS01085 0c6fee100ebe3ee2b5fec86df4217e23 345 PIRSF PIRSF001123 1 342 8.4E-39 T 25-04-2016 IPR008007 Peptidase M42 SMA_RS01085 0c6fee100ebe3ee2b5fec86df4217e23 345 Pfam PF05343 M42 glutamyl aminopeptidase 45 334 1.4E-82 T 25-04-2016 IPR008007 Peptidase M42 SMA_RS01085 0c6fee100ebe3ee2b5fec86df4217e23 345 Gene3D G3DSA:2.40.30.40 70 166 4.6E-34 T 25-04-2016 IPR023367 Peptidase M42, domain 2 SMA_RS01085 0c6fee100ebe3ee2b5fec86df4217e23 345 PANTHER PTHR32481 1 344 1.8E-189 T 25-04-2016 SMA_RS01085 0c6fee100ebe3ee2b5fec86df4217e23 345 SUPERFAMILY SSF101821 70 183 3.66E-28 T 25-04-2016 SMA_RS07560 b2c23b5df3a3a67e63b4763b260ef0c4 92 Pfam PF04024 PspC domain 5 59 9.4E-19 T 25-04-2016 IPR007168 Phage shock protein, PspC, N-terminal SMA_RS07560 b2c23b5df3a3a67e63b4763b260ef0c4 92 PANTHER PTHR33885 1 80 1.3E-19 T 25-04-2016 SMA_RS04375 0b76f3bb6f215f89185a8062a71a7c1d 246 Gene3D G3DSA:3.40.50.300 36 213 8.7E-39 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS04375 0b76f3bb6f215f89185a8062a71a7c1d 246 PANTHER PTHR32309:SF13 16 232 2.9E-65 T 25-04-2016 SMA_RS04375 0b76f3bb6f215f89185a8062a71a7c1d 246 Pfam PF13614 AAA domain 36 195 1.0E-20 T 25-04-2016 IPR025669 AAA domain SMA_RS04375 0b76f3bb6f215f89185a8062a71a7c1d 246 TIGRFAM TIGR01007 eps_fam: capsular exopolysaccharide family 19 222 5.7E-94 T 25-04-2016 IPR005702 Exopolysaccharide synthesis protein GO:0045226 SMA_RS04375 0b76f3bb6f215f89185a8062a71a7c1d 246 SUPERFAMILY SSF52540 36 215 2.21E-39 T 25-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMA_RS04375 0b76f3bb6f215f89185a8062a71a7c1d 246 PANTHER PTHR32309 16 232 2.9E-65 T 25-04-2016 SMA_RS06555 e324785f91af1a9a04e76f5f6f9ed426 513 SUPERFAMILY SSF51445 3 493 3.54E-158 T 25-04-2016 IPR017853 Glycoside hydrolase superfamily SMA_RS06555 e324785f91af1a9a04e76f5f6f9ed426 513 PANTHER PTHR32438 2 511 3.1E-131 T 25-04-2016 SMA_RS06555 e324785f91af1a9a04e76f5f6f9ed426 513 Gene3D G3DSA:3.20.20.80 2 495 4.8E-170 T 25-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 SMA_RS06555 e324785f91af1a9a04e76f5f6f9ed426 513 Pfam PF02446 4-alpha-glucanotransferase 10 473 1.3E-149 T 25-04-2016 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 SMA_RS06555 e324785f91af1a9a04e76f5f6f9ed426 513 PANTHER PTHR32438:SF5 2 511 3.1E-131 T 25-04-2016 SMA_RS06555 e324785f91af1a9a04e76f5f6f9ed426 513 TIGRFAM TIGR00217 malQ: 4-alpha-glucanotransferase 2 493 8.5E-95 T 25-04-2016 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 SMA_RS02395 b9eb266d204585dc2246a7bf147ad0b2 74 Pfam PF13268 Protein of unknown function (DUF4059) 1 72 5.5E-34 T 25-04-2016 IPR025134 Protein of unknown function DUF4059 SMA_RS03840 fe44567b1f4ad04e0cba6f184faf47c7 244 Gene3D G3DSA:3.20.20.140 3 242 4.0E-16 T 25-04-2016 SMA_RS03840 fe44567b1f4ad04e0cba6f184faf47c7 244 PANTHER PTHR21039 1 240 4.1E-23 T 25-04-2016 IPR010140 Histidinol phosphate phosphatase, HisJ GO:0000105|GO:0004401 KEGG: 00340+3.1.3.15|UniPathway: UPA00031 SMA_RS03840 fe44567b1f4ad04e0cba6f184faf47c7 244 SUPERFAMILY SSF89550 2 243 6.41E-25 T 25-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 SMA_RS02100 f5250db6261a7a52e92b89381011ad70 303 TIGRFAM TIGR00828 EIID-AGA: PTS system, mannose/fructose/sorbose family, IID component 6 221 7.8E-89 T 25-04-2016 IPR018405 Phosphotransferase system, mannose/fructose/sorbose family IID component, subgroup GO:0009401|GO:0016021 SMA_RS02100 f5250db6261a7a52e92b89381011ad70 303 Pfam PF03613 PTS system mannose/fructose/sorbose family IID component 6 303 1.3E-115 T 25-04-2016 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 SMA_RS02100 f5250db6261a7a52e92b89381011ad70 303 PANTHER PTHR32502:SF5 1 303 3.6E-158 T 25-04-2016 SMA_RS02100 f5250db6261a7a52e92b89381011ad70 303 PANTHER PTHR32502 1 303 3.6E-158 T 25-04-2016 SMA_RS01365 1e48050ff54a3e1c0d768017166b8574 181 Gene3D G3DSA:3.40.50.360 1 179 5.6E-35 T 25-04-2016 IPR029039 Flavoprotein-like domain SMA_RS01365 1e48050ff54a3e1c0d768017166b8574 181 PANTHER PTHR30543:SF6 1 181 3.8E-37 T 25-04-2016 SMA_RS01365 1e48050ff54a3e1c0d768017166b8574 181 SUPERFAMILY SSF52218 2 176 8.22E-31 T 25-04-2016 IPR029039 Flavoprotein-like domain SMA_RS01365 1e48050ff54a3e1c0d768017166b8574 181 PANTHER PTHR30543 1 181 3.8E-37 T 25-04-2016 SMA_RS01365 1e48050ff54a3e1c0d768017166b8574 181 Pfam PF03358 NADPH-dependent FMN reductase 3 143 6.8E-23 T 25-04-2016 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 SMA_RS03950 096e6985070c51ecde7f6baca97e93cb 140 Pfam PF13328 HD domain 8 81 2.9E-7 T 25-04-2016 IPR003607 HD/PDEase domain SMA_RS03950 096e6985070c51ecde7f6baca97e93cb 140 SUPERFAMILY SSF109604 6 133 3.35E-22 T 25-04-2016 SMA_RS00950 e32848764ea6fd3922acab76a73f624d 58 Gene3D G3DSA:1.20.5.1030 1 54 3.2E-12 T 25-04-2016 SMA_RS00950 e32848764ea6fd3922acab76a73f624d 58 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 2 51 1.4E-9 T 25-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 SMA_RS00950 e32848764ea6fd3922acab76a73f624d 58 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 1 51 5.9E-11 T 25-04-2016 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 SMA_RS02105 60e15f5b6b653259572d6df3170d002a 267 PANTHER PTHR32502 1 267 1.2E-152 T 25-04-2016 SMA_RS02105 60e15f5b6b653259572d6df3170d002a 267 Pfam PF03609 PTS system sorbose-specific iic component 4 238 1.6E-69 T 25-04-2016 IPR004700 Phosphotransferase system, sorbose-specific IIC subunit GO:0009401|GO:0016021 SMA_RS02105 60e15f5b6b653259572d6df3170d002a 267 PANTHER PTHR32502:SF10 1 267 1.2E-152 T 25-04-2016 SMA_RS07075 310ae0dd24ce3e8449153ca07285de7e 226 Pfam PF07314 Protein of unknown function (DUF1461) 6 180 3.5E-47 T 25-04-2016 IPR010178 Integral membrane protein 1906 SMA_RS07075 310ae0dd24ce3e8449153ca07285de7e 226 TIGRFAM TIGR01906 integ_TIGR01906: integral membrane protein TIGR01906 1 205 3.8E-48 T 25-04-2016 IPR010178 Integral membrane protein 1906 SMA_RS07165 62006c4ff7abc3cf2e06ee3b29ee1712 312 Pfam PF03714 Bacterial pullanase-associated domain 234 307 5.5E-7 T 25-04-2016 IPR005323 Bacterial pullanase-associated domain GO:0005975|GO:0030246 SMA_RS07165 62006c4ff7abc3cf2e06ee3b29ee1712 312 TIGRFAM TIGR01168 YSIRK_signal: gram-positive signal peptide, YSIRK family 11 42 1.8E-8 T 25-04-2016 IPR005877 YSIRK Gram-positive signal peptide GO:0016020 SMA_RS07165 62006c4ff7abc3cf2e06ee3b29ee1712 312 SUPERFAMILY SSF49452 232 312 6.54E-18 T 25-04-2016 IPR013784 Carbohydrate-binding-like fold GO:0030246 SMA_RS07165 62006c4ff7abc3cf2e06ee3b29ee1712 312 Pfam PF04650 YSIRK type signal peptide 11 35 9.5E-11 T 25-04-2016 IPR005877 YSIRK Gram-positive signal peptide GO:0016020 SMA_RS09555 a0024d73fcd511a9bdb72733950ed238 208 Pfam PF03432 Relaxase/Mobilisation nuclease domain 11 201 7.8E-43 T 25-04-2016 IPR005094 Endonuclease relaxase, MobA/VirD2 SMA_RS08540 dcb800610caf541b169810ae5d18aaf5 146 PANTHER PTHR33221:SF5 2 144 7.3E-37 T 25-04-2016 SMA_RS08540 dcb800610caf541b169810ae5d18aaf5 146 PANTHER PTHR33221 2 144 7.3E-37 T 25-04-2016 SMA_RS08540 dcb800610caf541b169810ae5d18aaf5 146 Gene3D G3DSA:1.10.10.10 1 144 1.3E-42 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMA_RS08540 dcb800610caf541b169810ae5d18aaf5 146 Pfam PF02082 Transcriptional regulator 1 82 1.2E-17 T 25-04-2016 IPR000944 Transcription regulator Rrf2-type SMA_RS08540 dcb800610caf541b169810ae5d18aaf5 146 SUPERFAMILY SSF46785 4 138 8.49E-26 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMA_RS09110 e0bb774522e3286290208ab62f7a6677 108 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 7 105 6.3E-22 T 25-04-2016 IPR008407 Branched-chain amino acid transport, AzlD SMA_RS07545 21c26c96f16cdcf48f93594fbd88b313 139 PANTHER PTHR40070:SF1 6 134 5.5E-23 T 25-04-2016 SMA_RS07545 21c26c96f16cdcf48f93594fbd88b313 139 Pfam PF06103 Bacterial protein of unknown function (DUF948) 4 98 4.6E-25 T 25-04-2016 IPR009293 Uncharacterised protein family UPF0478 SMA_RS07545 21c26c96f16cdcf48f93594fbd88b313 139 PANTHER PTHR40070 6 134 5.5E-23 T 25-04-2016 SMA_RS09790 e1bb1ea211adbc81e3888f97de00ce10 279 Pfam PF01061 ABC-2 type transporter 2 220 6.8E-15 T 25-04-2016 IPR013525 ABC-2 type transporter GO:0016020 SMA_RS06195 a153cbb667c8d5bc1cb0f14dbbc774d9 410 PANTHER PTHR30572 1 410 7.7E-86 T 25-04-2016 SMA_RS06195 a153cbb667c8d5bc1cb0f14dbbc774d9 410 Pfam PF02687 FtsX-like permease family 290 403 1.3E-23 T 25-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 SMA_RS06195 a153cbb667c8d5bc1cb0f14dbbc774d9 410 Pfam PF12704 MacB-like periplasmic core domain 18 251 4.3E-32 T 25-04-2016 IPR025857 MacB-like periplasmic core domain SMA_RS10260 93634d5620e2a1866c1e9986ac33dbd1 79 Pfam PF04226 Transglycosylase associated protein 32 75 1.4E-8 T 25-04-2016 IPR007341 Transglycosylase-associated protein GO:0016021 SMA_RS04205 0214e5b76619ca60227be4c2c9627970 103 PANTHER PTHR33570 2 103 4.5E-21 T 25-04-2016 SMA_RS04205 0214e5b76619ca60227be4c2c9627970 103 SUPERFAMILY SSF69118 9 103 5.1E-26 T 25-04-2016 IPR029032 AhpD-like SMA_RS04205 0214e5b76619ca60227be4c2c9627970 103 PANTHER PTHR33570:SF1 2 103 4.5E-21 T 25-04-2016 SMA_RS04205 0214e5b76619ca60227be4c2c9627970 103 Gene3D G3DSA:1.20.1290.10 9 103 6.7E-22 T 25-04-2016 IPR029032 AhpD-like SMA_RS04205 0214e5b76619ca60227be4c2c9627970 103 Pfam PF02627 Carboxymuconolactone decarboxylase family 17 102 7.7E-20 T 25-04-2016 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 SMA_RS06740 22d5d8286c1cabef7efb695d58d22a1e 254 Pfam PF12730 ABC-2 family transporter protein 5 169 1.5E-7 T 25-04-2016 IPR032688 ABC-2 family transporter protein GO:0006810 SMA_RS02835 f8d8d0178617374baf83a7010d12a31f 161 Pfam PF13936 Helix-turn-helix domain 2 43 3.4E-14 T 25-04-2016 IPR025246 Transposase IS30-like HTH domain SMA_RS02835 f8d8d0178617374baf83a7010d12a31f 161 PANTHER PTHR10948 1 121 2.7E-15 T 25-04-2016 SMA_RS09540 6601bce6d43aa7190bc83272f3f2fc70 124 PANTHER PTHR10361:SF31 1 121 1.4E-51 T 25-04-2016 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 SMA_RS09540 6601bce6d43aa7190bc83272f3f2fc70 124 PANTHER PTHR10361 1 121 1.4E-51 T 25-04-2016 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 SMA_RS08220 b38614b220697cc28a20a236665628f5 674 PANTHER PTHR10110 1 661 3.5E-142 T 25-04-2016 IPR018422 Cation/H+ exchanger, CPA1 family GO:0006812|GO:0015299|GO:0016021 Reactome: REACT_15518 SMA_RS08220 b38614b220697cc28a20a236665628f5 674 Pfam PF00999 Sodium/hydrogen exchanger family 7 392 1.0E-40 T 25-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 SMA_RS08220 b38614b220697cc28a20a236665628f5 674 PANTHER PTHR10110:SF120 1 661 3.5E-142 T 25-04-2016 SMA_RS07670 1e64c987416332f36212d64ca43c56fc 202 PANTHER PTHR12677 12 174 1.5E-12 T 25-04-2016 IPR015414 Transmembrane protein TMEM64/TMEM41 GO:0016021 SMA_RS07670 1e64c987416332f36212d64ca43c56fc 202 Pfam PF09335 SNARE associated Golgi protein 70 190 2.7E-17 T 25-04-2016 IPR032816 SNARE associated Golgi protein SMA_RS07670 1e64c987416332f36212d64ca43c56fc 202 PANTHER PTHR12677:SF26 12 174 1.5E-12 T 25-04-2016 SMA_RS07305 22d5d10f263243bdde1530d9ef318b36 156 Gene3D G3DSA:3.10.450.40 32 99 1.9E-17 T 25-04-2016 SMA_RS07305 22d5d10f263243bdde1530d9ef318b36 156 SUPERFAMILY SSF54403 37 100 2.72E-16 T 25-04-2016 SMA_RS07305 22d5d10f263243bdde1530d9ef318b36 156 SUPERFAMILY SSF54403 100 153 1.34E-7 T 25-04-2016 SMA_RS07305 22d5d10f263243bdde1530d9ef318b36 156 Gene3D G3DSA:3.10.450.40 100 152 1.8E-6 T 25-04-2016 SMA_RS02730 31ec7949ad0a47642234f7a729944a6e 235 Pfam PF04973 Nicotinamide mononucleotide transporter 55 230 2.1E-26 T 25-04-2016 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 SMA_RS02730 31ec7949ad0a47642234f7a729944a6e 235 TIGRFAM TIGR01528 NMN_trans_PnuC: nicotinamide mononucleotide transporter PnuC 55 232 9.7E-13 T 25-04-2016 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 SMA_RS02855 a54a151c85d810c44c72d3b615f3834e 192 PIRSF PIRSF012565 1 192 3.8E-66 T 25-04-2016 IPR009370 Protein of unknown function DUF1027 SMA_RS02855 a54a151c85d810c44c72d3b615f3834e 192 Pfam PF06265 Protein of unknown function (DUF1027) 30 111 2.7E-34 T 25-04-2016 IPR009370 Protein of unknown function DUF1027 SMA_RS02855 a54a151c85d810c44c72d3b615f3834e 192 PANTHER PTHR41319 2 123 9.8E-44 T 25-04-2016 SMA_RS02855 a54a151c85d810c44c72d3b615f3834e 192 PANTHER PTHR41319:SF1 2 123 9.8E-44 T 25-04-2016 SMA_RS09560 ae1ef39f61bcdfe8010958950e0ddb55 121 Pfam PF05713 Bacterial mobilisation protein (MobC) 62 105 4.4E-13 T 25-04-2016 IPR008687 Bacterial mobilisation SMA_RS07450 a1ba4c4418e4dc376f26735dd8545321 161 ProSitePatterns PS00460 Glutathione peroxidases active site. 24 39 - T 25-04-2016 IPR029759 Glutathione peroxidase active site SMA_RS07450 a1ba4c4418e4dc376f26735dd8545321 161 Pfam PF00255 Glutathione peroxidase 4 111 2.6E-39 T 25-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 SMA_RS07450 a1ba4c4418e4dc376f26735dd8545321 161 Gene3D G3DSA:3.40.30.10 3 159 1.7E-68 T 25-04-2016 IPR012336 Thioredoxin-like fold SMA_RS07450 a1ba4c4418e4dc376f26735dd8545321 161 SUPERFAMILY SSF52833 3 158 2.72E-57 T 25-04-2016 IPR012336 Thioredoxin-like fold SMA_RS07450 a1ba4c4418e4dc376f26735dd8545321 161 PANTHER PTHR11592 1 160 3.5E-79 T 25-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 SMA_RS07450 a1ba4c4418e4dc376f26735dd8545321 161 PRINTS PR01011 Glutathione peroxidase family signature 22 39 2.1E-17 T 25-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 SMA_RS07450 a1ba4c4418e4dc376f26735dd8545321 161 PRINTS PR01011 Glutathione peroxidase family signature 122 131 2.1E-17 T 25-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 SMA_RS07450 a1ba4c4418e4dc376f26735dd8545321 161 PRINTS PR01011 Glutathione peroxidase family signature 57 73 2.1E-17 T 25-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 SMA_RS07450 a1ba4c4418e4dc376f26735dd8545321 161 ProSitePatterns PS00763 Glutathione peroxidases signature 2. 60 67 - T 25-04-2016 IPR029760 Glutathione peroxidase conserved site SMA_RS07450 a1ba4c4418e4dc376f26735dd8545321 161 PIRSF PIRSF000303 1 161 7.5E-65 T 25-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 SMA_RS01780 bea26c94db4e8daf6165690466c90320 79 Pfam PF04226 Transglycosylase associated protein 31 75 1.8E-10 T 25-04-2016 IPR007341 Transglycosylase-associated protein GO:0016021 SMA_RS10525 5ba51d3ab0117cffc1ff53c7ba7a7b01 97 Gene3D G3DSA:3.30.420.10 5 88 1.1E-7 T 25-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMA_RS10525 5ba51d3ab0117cffc1ff53c7ba7a7b01 97 ProSitePatterns PS01043 Transposases, IS30 family, signature. 39 55 - T 25-04-2016 IPR001598 Transposase, IS30, conserved site GO:0003677|GO:0004803|GO:0006313 SMA_RS10525 5ba51d3ab0117cffc1ff53c7ba7a7b01 97 PANTHER PTHR10948 1 91 5.4E-22 T 25-04-2016 SMA_RS10525 5ba51d3ab0117cffc1ff53c7ba7a7b01 97 SUPERFAMILY SSF53098 3 89 1.26E-14 T 25-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMA_RS04410 e7d9e7661bb9f889c47f5b95f43f6250 91 Pfam PF08942 Domain of unknown function (DUF1919) 19 89 6.8E-23 T 25-04-2016 IPR015037 Protein of unknown function DUF1919 SMA_RS04410 e7d9e7661bb9f889c47f5b95f43f6250 91 SUPERFAMILY SSF142795 13 89 4.05E-28 T 25-04-2016 SMA_RS10210 b01ce2e79c618525142c00d851f6c374 97 SUPERFAMILY SSF109797 1 96 2.51E-20 T 25-04-2016 SMA_RS10210 b01ce2e79c618525142c00d851f6c374 97 Gene3D G3DSA:1.20.1440.50 1 76 8.5E-23 T 25-04-2016 IPR023130 Ta0600-like domain SMA_RS10210 b01ce2e79c618525142c00d851f6c374 97 Pfam PF08951 Enterocin A Immunity 5 73 7.8E-8 T 25-04-2016 IPR015046 Enterocin A Immunity SMA_RS09410 8e7b0cfbb079eab156c28039cd0b84a7 423 Pfam PF03390 2-hydroxycarboxylate transporter family 9 417 9.4E-137 T 25-04-2016 IPR004679 2-hydroxycarboxylate transporter GO:0008514|GO:0015711|GO:0016021 SMA_RS09410 8e7b0cfbb079eab156c28039cd0b84a7 423 PANTHER PTHR40033 3 423 1.9E-91 T 25-04-2016 SMA_RS09410 8e7b0cfbb079eab156c28039cd0b84a7 423 PIRSF PIRSF005348 1 423 2.1E-143 T 25-04-2016 IPR004679 2-hydroxycarboxylate transporter GO:0008514|GO:0015711|GO:0016021 SMA_RS04610 600b34911ec2ca20d763bcbf9cf52c02 175 PANTHER PTHR33498:SF1 1 171 1.0E-73 T 25-04-2016 SMA_RS04610 600b34911ec2ca20d763bcbf9cf52c02 175 Pfam PF01610 Transposase 1 157 1.0E-25 T 25-04-2016 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain SMA_RS04610 600b34911ec2ca20d763bcbf9cf52c02 175 PANTHER PTHR33498 1 171 1.0E-73 T 25-04-2016 SMA_RS07525 048007c342e561002d593ac8c80b0925 429 PANTHER PTHR30217:SF6 2 429 2.0E-214 T 25-04-2016 SMA_RS07525 048007c342e561002d593ac8c80b0925 429 SUPERFAMILY SSF51412 18 149 8.06E-5 T 25-04-2016 SMA_RS07525 048007c342e561002d593ac8c80b0925 429 PANTHER PTHR30217 2 429 2.0E-214 T 25-04-2016 SMA_RS07525 048007c342e561002d593ac8c80b0925 429 Pfam PF16325 Peptidase family U32 C-terminal domain 327 408 4.4E-20 T 25-04-2016 IPR032525 Peptidase family U32, C-terminal KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- SMA_RS07525 048007c342e561002d593ac8c80b0925 429 Gene3D G3DSA:3.20.20.70 14 101 8.9E-4 T 25-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SMA_RS07525 048007c342e561002d593ac8c80b0925 429 Pfam PF01136 Peptidase family U32 85 311 3.9E-85 T 25-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- SMA_RS07525 048007c342e561002d593ac8c80b0925 429 ProSitePatterns PS01276 Peptidase family U32 signature. 166 184 - T 25-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- SMA_RS03805 8461593391ccb5ceca3a534d9b8503ff 63 Gene3D G3DSA:3.40.630.30 1 63 1.8E-10 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMA_RS03805 8461593391ccb5ceca3a534d9b8503ff 63 Pfam PF13302 Acetyltransferase (GNAT) domain 1 63 2.3E-9 T 25-04-2016 IPR000182 GNAT domain GO:0008080 SMA_RS03805 8461593391ccb5ceca3a534d9b8503ff 63 SUPERFAMILY SSF55729 1 63 3.25E-11 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMA_RS06300 1fc1d3edfce41414b0d7916883af6c22 112 PANTHER PTHR41254 1 111 4.5E-31 T 25-04-2016 SMA_RS06300 1fc1d3edfce41414b0d7916883af6c22 112 Pfam PF06133 Control of competence regulator ComK, YlbF/YmcA 4 107 6.8E-25 T 25-04-2016 IPR010368 Control of competence regulator ComK, YlbF/YmcA SMA_RS06300 1fc1d3edfce41414b0d7916883af6c22 112 Hamap MF_01526 UPF0342 protein . 1 112 18.208 T 25-04-2016 IPR010368 Control of competence regulator ComK, YlbF/YmcA SMA_RS06300 1fc1d3edfce41414b0d7916883af6c22 112 SUPERFAMILY SSF158622 3 111 2.75E-33 T 25-04-2016 IPR023378 YheA/YmcA-like domain SMA_RS06300 1fc1d3edfce41414b0d7916883af6c22 112 Gene3D G3DSA:1.20.1500.10 1 112 4.4E-42 T 25-04-2016 IPR023378 YheA/YmcA-like domain SMA_RS09090 7b1983c35676726f57c8bf9542fccbe9 177 Pfam PF04394 Protein of unknown function, DUF536 104 146 3.8E-18 T 25-04-2016 IPR007489 Domain of unknown function DUF536 SMA_RS09090 7b1983c35676726f57c8bf9542fccbe9 177 Pfam PF08279 HTH domain 6 29 5.6E-5 T 25-04-2016 IPR013196 Helix-turn-helix, type 11 SMA_RS09090 7b1983c35676726f57c8bf9542fccbe9 177 Gene3D G3DSA:1.10.10.10 6 33 7.6E-6 T 25-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMA_RS08455 04e28158055e6045623c303701e624c3 386 Pfam PF07261 Replication initiation and membrane attachment 269 330 1.4E-6 T 25-04-2016 IPR006343 Replication protein, DnaD/DnaB domain SMA_RS05285 31294b4aa6626eb8a65cac304eda0051 78 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 14 76 5.0E-23 T 25-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS05285 31294b4aa6626eb8a65cac304eda0051 78 Gene3D G3DSA:1.20.58.110 1 77 1.8E-21 T 25-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS05285 31294b4aa6626eb8a65cac304eda0051 78 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 77 3.2E-19 T 25-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS05285 31294b4aa6626eb8a65cac304eda0051 78 PANTHER PTHR33398 2 78 9.7E-25 T 25-04-2016 SMA_RS05285 31294b4aa6626eb8a65cac304eda0051 78 SUPERFAMILY SSF46992 3 76 6.02E-22 T 25-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS05285 31294b4aa6626eb8a65cac304eda0051 78 Pfam PF01649 Ribosomal protein S20 2 76 9.1E-20 T 25-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS05285 31294b4aa6626eb8a65cac304eda0051 78 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 78 15.395 T 25-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS02640 9d0c59c0aa90ff4ea2fa3c06473e69a0 112 Pfam PF08388 Group II intron, maturase-specific domain 1 50 1.4E-13 T 25-04-2016 IPR013597 Group II intron, maturase-specific SMA_RS07510 ffeb79053bc3918e218d94940ed0054a 70 Pfam PF02229 Transcriptional Coactivator p15 (PC4) 19 65 2.7E-9 T 25-04-2016 IPR003173 Transcriptional coactivator p15 (PC4) GO:0003677|GO:0003713|GO:0006355 SMA_RS07510 ffeb79053bc3918e218d94940ed0054a 70 PIRSF PIRSF037246 1 70 5.0E-36 T 25-04-2016 IPR017154 Uncharacterised conserved protein UCP037246 SMA_RS00260 ca75654caa39fb7e7c62905c14f11912 183 PANTHER PTHR10520 1 178 3.1E-79 T 25-04-2016 SMA_RS00260 ca75654caa39fb7e7c62905c14f11912 183 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 3 181 28.884 T 25-04-2016 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|UniPathway: UPA00074 SMA_RS00260 ca75654caa39fb7e7c62905c14f11912 183 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 2 178 7.0E-59 T 25-04-2016 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|UniPathway: UPA00074 SMA_RS00260 ca75654caa39fb7e7c62905c14f11912 183 Pfam PF00551 Formyl transferase 2 175 7.2E-49 T 25-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SMA_RS00260 ca75654caa39fb7e7c62905c14f11912 183 SUPERFAMILY SSF53328 2 177 1.2E-54 T 25-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SMA_RS00260 ca75654caa39fb7e7c62905c14f11912 183 Gene3D G3DSA:3.40.50.170 1 178 9.2E-64 T 25-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SMA_RS08175 806ba704ef735a3602819c8e829b707c 171 Gene3D G3DSA:2.30.30.330 4 168 1.2E-40 T 25-04-2016 SMA_RS08175 806ba704ef735a3602819c8e829b707c 171 SUPERFAMILY SSF54001 4 167 1.47E-34 T 25-04-2016 SMA_RS08175 806ba704ef735a3602819c8e829b707c 171 Pfam PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family 6 165 1.5E-21 T 25-04-2016 IPR024453 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family SMA_RS08405 d35b095abdeef2fef3ae2dab402a6d17 68 Pfam PF13007 Transposase C of IS166 homeodomain 25 64 5.1E-9 T 25-04-2016 IPR024463 Transposase TnpC, homeodomain SMA_RS00435 46908f0518afc1424db8e9cf17b8bbb9 146 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 146 21.881 T 25-04-2016 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 SMA_RS00435 46908f0518afc1424db8e9cf17b8bbb9 146 SUPERFAMILY SSF52080 4 144 3.66E-49 T 25-04-2016 IPR021131 Ribosomal protein L18e/L15P SMA_RS00435 46908f0518afc1424db8e9cf17b8bbb9 146 PANTHER PTHR12934 1 146 1.9E-74 T 25-04-2016 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 SMA_RS00435 46908f0518afc1424db8e9cf17b8bbb9 146 ProSitePatterns PS00475 Ribosomal protein L15 signature. 110 140 - T 25-04-2016 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMA_RS00435 46908f0518afc1424db8e9cf17b8bbb9 146 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 144 4.2E-37 T 25-04-2016 IPR021131 Ribosomal protein L18e/L15P SMA_RS00435 46908f0518afc1424db8e9cf17b8bbb9 146 Gene3D G3DSA:3.100.10.10 32 146 8.6E-41 T 25-04-2016 SMA_RS00435 46908f0518afc1424db8e9cf17b8bbb9 146 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 2 144 8.6E-55 T 25-04-2016 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 SMA_RS03795 ef56f27e25e6498c67dbf8efb49f51d6 62 Pfam PF11772 DNA-directed RNA polymerase subunit beta 15 61 1.3E-20 T 25-04-2016 IPR024596 DNA-directed RNA polymerase subunit beta/EpuA SMA_RS03795 ef56f27e25e6498c67dbf8efb49f51d6 62 ProDom PD053619 EPUA PRECURSOR SIGNAL PEPTIDE YFDG EXTRACELLULAR OB2955 BH3736 GBS0884 SMU.1524C 3 59 4.0E-8 T 25-04-2016 IPR024596 DNA-directed RNA polymerase subunit beta/EpuA SMA_RS05405 9f76ab9930cae3a3c8de6da2b0ccdccf 79 Gene3D G3DSA:1.10.3910.10 1 75 1.3E-32 T 25-04-2016 IPR015077 Domain of unknown function DUF1858 SMA_RS05405 9f76ab9930cae3a3c8de6da2b0ccdccf 79 SUPERFAMILY SSF140683 1 75 3.79E-21 T 25-04-2016 SMA_RS05405 9f76ab9930cae3a3c8de6da2b0ccdccf 79 Pfam PF08984 Domain of unknown function (DUF1858) 5 62 3.2E-18 T 25-04-2016 IPR015077 Domain of unknown function DUF1858 SMA_RS06480 18ff3dc6e70da9291322a13f7c5ec1e1 311 PANTHER PTHR22916 1 241 2.0E-27 T 25-04-2016 SMA_RS06480 18ff3dc6e70da9291322a13f7c5ec1e1 311 SUPERFAMILY SSF53448 2 237 1.97E-46 T 25-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SMA_RS06480 18ff3dc6e70da9291322a13f7c5ec1e1 311 Pfam PF00535 Glycosyl transferase family 2 5 113 1.3E-21 T 25-04-2016 IPR001173 Glycosyltransferase 2-like SMA_RS06480 18ff3dc6e70da9291322a13f7c5ec1e1 311 Gene3D G3DSA:3.90.550.10 1 226 1.4E-41 T 25-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SMA_RS05685 88a048ad6f175a52bb3be50a35db82a9 82 Pfam PF11372 Domain of unknown function (DUF3173) 2 73 2.7E-25 T 25-04-2016 IPR021512 Protein of unknown function DUF3173 SMA_RS05685 88a048ad6f175a52bb3be50a35db82a9 82 Gene3D G3DSA:1.10.150.20 4 40 8.5E-4 T 25-04-2016 SMA_RS00275 239895e88ce2d23522ece4267f327b17 112 Pfam PF02371 Transposase IS116/IS110/IS902 family 4 64 1.5E-9 T 25-04-2016 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 SMA_RS06705 bc798bb6988bd5a1aace54dbf3169c28 174 Gene3D G3DSA:1.10.10.60 12 50 3.5E-8 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMA_RS06705 bc798bb6988bd5a1aace54dbf3169c28 174 Pfam PF13936 Helix-turn-helix domain 12 55 1.6E-14 T 25-04-2016 IPR025246 Transposase IS30-like HTH domain SMA_RS04735 13f18ecac59ea60759ecd7131ca650db 115 Pfam PF08866 Putative amino acid metabolism 1 111 5.5E-44 T 25-04-2016 IPR014965 Putative amino acid metabolism SMA_RS04735 13f18ecac59ea60759ecd7131ca650db 115 SUPERFAMILY SSF160800 1 112 2.09E-43 T 25-04-2016 IPR014965 Putative amino acid metabolism SMA_RS04735 13f18ecac59ea60759ecd7131ca650db 115 Gene3D G3DSA:3.30.1820.10 1 112 6.9E-48 T 25-04-2016 IPR014965 Putative amino acid metabolism SMA_RS09850 220cedea1d42ba8d5f94b87f3938d974 126 Gene3D G3DSA:3.30.1390.10 80 109 4.9E-4 T 25-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like SMA_RS04135 38eb1d83a107a3ccc5ba6da0114d7589 102 Pfam PF05987 Bacterial protein of unknown function (DUF898) 53 99 4.8E-10 T 25-04-2016 IPR010295 Protein of unknown function DUF898 SMA_RS03480 c7f05198614ae0963a2f742f8d6d3e23 264 Gene3D G3DSA:3.40.50.620 32 177 1.8E-36 T 25-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SMA_RS03480 c7f05198614ae0963a2f742f8d6d3e23 264 Pfam PF02698 DUF218 domain 68 175 1.8E-7 T 25-04-2016 IPR003848 Domain of unknown function DUF218 SMA_RS04270 c4546e04cf07f4e14aaa8cb766dedd76 200 PANTHER PTHR23026:SF115 1 200 8.2E-45 T 25-04-2016 SMA_RS04270 c4546e04cf07f4e14aaa8cb766dedd76 200 SUPERFAMILY SSF55469 1 198 3.14E-46 T 25-04-2016 IPR000415 Nitroreductase-like GO:0016491 SMA_RS04270 c4546e04cf07f4e14aaa8cb766dedd76 200 PANTHER PTHR23026 1 200 8.2E-45 T 25-04-2016 SMA_RS04270 c4546e04cf07f4e14aaa8cb766dedd76 200 Gene3D G3DSA:3.40.109.10 1 198 3.5E-49 T 25-04-2016 IPR000415 Nitroreductase-like GO:0016491 SMA_RS04270 c4546e04cf07f4e14aaa8cb766dedd76 200 Pfam PF00881 Nitroreductase family 8 180 2.9E-28 T 25-04-2016 IPR029479 Nitroreductase SMA_RS02270 4b4bc73138ce94fe33fab05e7d0f72a3 281 Gene3D G3DSA:2.20.28.50 30 66 7.9E-11 T 25-04-2016 SMA_RS02270 4b4bc73138ce94fe33fab05e7d0f72a3 281 SUPERFAMILY SSF82549 2 281 6.02E-67 T 25-04-2016 SMA_RS02270 4b4bc73138ce94fe33fab05e7d0f72a3 281 Gene3D G3DSA:3.30.1180.10 155 280 1.6E-36 T 25-04-2016 SMA_RS02270 4b4bc73138ce94fe33fab05e7d0f72a3 281 PANTHER PTHR33434:SF3 2 274 8.2E-71 T 25-04-2016 SMA_RS02270 4b4bc73138ce94fe33fab05e7d0f72a3 281 Gene3D G3DSA:3.40.50.10440 67 153 3.4E-33 T 25-04-2016 SMA_RS02270 4b4bc73138ce94fe33fab05e7d0f72a3 281 Gene3D G3DSA:3.40.50.10440 2 29 3.4E-33 T 25-04-2016 SMA_RS02270 4b4bc73138ce94fe33fab05e7d0f72a3 281 TIGRFAM TIGR00762 DegV: EDD domain protein, DegV family 4 277 3.9E-59 T 25-04-2016 IPR003797 DegV SMA_RS02270 4b4bc73138ce94fe33fab05e7d0f72a3 281 Pfam PF02645 Uncharacterised protein, DegV family COG1307 2 272 5.2E-69 T 25-04-2016 IPR003797 DegV SMA_RS02270 4b4bc73138ce94fe33fab05e7d0f72a3 281 PANTHER PTHR33434 2 274 8.2E-71 T 25-04-2016 SMA_RS02445 fc006ea0e15a230fd2115e6a2146c0c2 509 Hamap MF_01941 Mid-cell-anchored protein Z [mapZ]. 1 509 26.781 T 25-04-2016 IPR030858 Mid-cell-anchored protein Z GO:0016021|GO:0051301 SMA_RS01765 82f020ae63a0385df64390fcb87aa94f 188 PANTHER PTHR34297 13 145 1.1E-45 T 25-04-2016 SMA_RS01765 82f020ae63a0385df64390fcb87aa94f 188 Pfam PF03780 Asp23 family, cell envelope-related function 15 121 7.9E-30 T 25-04-2016 IPR005531 Alkaline shock protein Asp23 SMA_RS01765 82f020ae63a0385df64390fcb87aa94f 188 PANTHER PTHR34297:SF1 13 145 1.1E-45 T 25-04-2016 SMA_RS06865 b1c9480a39e9904b6f9dc1a794a1b9ef 503 SUPERFAMILY SSF55874 365 489 2.88E-8 T 25-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SMA_RS10005 5b11800b8f1b8369e4828c5b176f5e9c 112 Pfam PF02371 Transposase IS116/IS110/IS902 family 4 64 1.5E-9 T 25-04-2016 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 SMA_RS04520 61835779db1fbdf658e1f7556f523489 76 Pfam PF11184 Protein of unknown function (DUF2969) 1 75 2.7E-23 T 25-04-2016 IPR021351 Protein of unknown function DUF2969 SMA_RS04380 08f79b4c0014240f53f63a3b57d83a3a 458 Pfam PF13727 CoA-binding domain 81 201 1.3E-5 T 25-04-2016 SMA_RS04380 08f79b4c0014240f53f63a3b57d83a3a 458 TIGRFAM TIGR03025 EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 15 457 5.0E-104 T 25-04-2016 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase SMA_RS04380 08f79b4c0014240f53f63a3b57d83a3a 458 PANTHER PTHR30576 10 458 2.9E-93 T 25-04-2016 SMA_RS04380 08f79b4c0014240f53f63a3b57d83a3a 458 Pfam PF02397 Bacterial sugar transferase 263 452 1.8E-55 T 25-04-2016 IPR003362 Bacterial sugar transferase SMA_RS07535 fac7c74bb8293a5c772d6f794d47db5a 94 Pfam PF11674 Protein of unknown function (DUF3270) 4 89 2.6E-31 T 25-04-2016 IPR021688 Protein of unknown function DUF3270 SMA_RS09285 b6dbf08e79939ba2174f04c29155ad6c 86 Pfam PF01527 Transposase 2 69 2.6E-11 T 25-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 SMA_RS09285 b6dbf08e79939ba2174f04c29155ad6c 86 SUPERFAMILY SSF46689 1 83 8.42E-17 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMA_RS09285 b6dbf08e79939ba2174f04c29155ad6c 86 Gene3D G3DSA:1.10.10.60 6 78 3.9E-15 T 25-04-2016 IPR009057 Homeodomain-like GO:0003677 SMA_RS09285 b6dbf08e79939ba2174f04c29155ad6c 86 PANTHER PTHR33215:SF1 1 84 7.0E-12 T 25-04-2016 SMA_RS09285 b6dbf08e79939ba2174f04c29155ad6c 86 PANTHER PTHR33215 1 84 7.0E-12 T 25-04-2016 SMA_RS06900 3d6e770f483c65638cad9952bf264c08 58 Pfam PF04604 Type-A lantibiotic 1 51 1.0E-17 T 25-04-2016 IPR007682 Lantibiotic, type A, Lactobacillales-type GO:0005576|GO:0042742 SMA_RS09755 ff2c130aab6614d6de89945cbe2426bf 1131 TIGRFAM TIGR01167 LPXTG_anchor: LPXTG cell wall anchor domain 1096 1129 0.0014 T 25-04-2016 IPR019931 LPXTG cell wall anchor domain SMA_RS09755 ff2c130aab6614d6de89945cbe2426bf 1131 TIGRFAM TIGR04228 isopep_sspB_C2: adhesin isopeptide-forming adherence domain 666 753 2.6E-16 T 25-04-2016 IPR026345 Adhesin isopeptide-forming adherence domain SMA_RS09755 ff2c130aab6614d6de89945cbe2426bf 1131 TIGRFAM TIGR04228 isopep_sspB_C2: adhesin isopeptide-forming adherence domain 775 872 5.7E-33 T 25-04-2016 IPR026345 Adhesin isopeptide-forming adherence domain SMA_RS02125 829fc307db30d1f3ef4edddb067dfcfb 199 Pfam PF07099 Protein of unknown function (DUF1361) 31 188 2.2E-37 T 25-04-2016 IPR009793 Protein of unknown function DUF1361 SMA_RS02165 4ebc8e583c4a9e8c05db875b31d07f38 344 Pfam PF05975 Bacterial ABC transporter protein EcsB 159 328 1.5E-40 T 25-04-2016 IPR010288 Bacterial ABC transporter EcsB GO:0016021 SMA_RS02165 4ebc8e583c4a9e8c05db875b31d07f38 344 Pfam PF05975 Bacterial ABC transporter protein EcsB 2 159 1.2E-35 T 25-04-2016 IPR010288 Bacterial ABC transporter EcsB GO:0016021 SMA_RS02165 4ebc8e583c4a9e8c05db875b31d07f38 344 PANTHER PTHR41253 1 344 5.0E-33 T 25-04-2016 SMA_RS08610 fc012a100f9a45ec33cb50a3f10d85d5 392 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 112 311 7.4E-10 T 25-04-2016 IPR000477 Reverse transcriptase domain SMA_RS07855 4c03f7c29ed145afdc6ed602abe17ec7 288 PANTHER PTHR37296 2 287 5.7E-104 T 25-04-2016 SMA_RS07855 4c03f7c29ed145afdc6ed602abe17ec7 288 PIRSF PIRSF012524 1 285 1.8E-104 T 25-04-2016 IPR014464 Conserved virulence factor B SMA_RS07855 4c03f7c29ed145afdc6ed602abe17ec7 288 Gene3D G3DSA:2.40.50.140 152 215 4.8E-4 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMA_RS07855 4c03f7c29ed145afdc6ed602abe17ec7 288 Pfam PF13509 S1 domain 8 61 9.5E-11 T 25-04-2016 SMA_RS07855 4c03f7c29ed145afdc6ed602abe17ec7 288 SUPERFAMILY SSF50249 147 218 7.53E-6 T 25-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMA_RS03185 e98e9bfd06c2305dc3d0fd31f646a765 200 Pfam PF09911 Uncharacterized protein conserved in bacteria (DUF2140) 11 196 2.6E-63 T 25-04-2016 IPR018672 Protein of unknown function DUF2140 SMA_RS09325 18c8194112700508359af649216d2901 76 Pfam PF03047 COMC family 1 25 2.4E-5 T 25-04-2016 IPR004288 Competence protein, ComC GO:0005186 SMA_RS09325 18c8194112700508359af649216d2901 76 TIGRFAM TIGR01847 bacteriocin_sig: bacteriocin-type signal sequence 9 23 0.0066 T 25-04-2016 IPR010133 Bacteriocin-type signal sequence SMA_RS04545 6b635364e34d56b87aec96e6a4d4a45b 231 Pfam PF04172 LrgB-like family 15 227 1.6E-64 T 25-04-2016 IPR007300 CidB/LrgB family SMA_RS04545 6b635364e34d56b87aec96e6a4d4a45b 231 PANTHER PTHR30249 1 230 1.6E-63 T 25-04-2016 SMA_RS06265 199f4cf20d6f995899d3b3a9a3c73dbe 181 Pfam PF13508 Acetyltransferase (GNAT) domain 47 133 6.1E-9 T 25-04-2016 IPR000182 GNAT domain GO:0008080 SMA_RS06265 199f4cf20d6f995899d3b3a9a3c73dbe 181 Gene3D G3DSA:3.40.630.30 12 146 1.1E-29 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMA_RS06265 199f4cf20d6f995899d3b3a9a3c73dbe 181 SUPERFAMILY SSF55729 15 150 5.06E-14 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMA_RS08055 071616a7be2eb3e3767e0aa999727deb 266 Pfam PF04468 PSP1 C-terminal conserved region 61 145 5.0E-19 T 25-04-2016 IPR007557 PSP1, C-terminal SMA_RS08055 071616a7be2eb3e3767e0aa999727deb 266 PANTHER PTHR21600:SF3 25 258 3.3E-34 T 25-04-2016 SMA_RS08055 071616a7be2eb3e3767e0aa999727deb 266 PANTHER PTHR21600 25 258 3.3E-34 T 25-04-2016 SMA_RS03070 4422a844e6b1c21ddf0bfb5ac122985d 100 Gene3D G3DSA:3.40.1720.10 1 98 3.7E-44 T 25-04-2016 SMA_RS03070 4422a844e6b1c21ddf0bfb5ac122985d 100 Pfam PF08860 Domain of unknown function (DUF1827) 1 97 6.0E-38 T 25-04-2016 IPR014959 Protein of unknown function DUF1827 SMA_RS01410 96d58f441af09cb8d077beaece7468c6 77 Pfam PF04226 Transglycosylase associated protein 31 75 1.6E-10 T 25-04-2016 IPR007341 Transglycosylase-associated protein GO:0016021 SMA_RS07115 b5ff50a8d667c2e2ef9e2d5b18749762 318 PANTHER PTHR37804 1 316 4.0E-44 T 25-04-2016 SMA_RS07115 b5ff50a8d667c2e2ef9e2d5b18749762 318 Pfam PF07949 YbbR-like protein 237 313 1.1E-11 T 25-04-2016 IPR012505 YbbR-like SMA_RS07115 b5ff50a8d667c2e2ef9e2d5b18749762 318 Pfam PF07949 YbbR-like protein 52 135 2.4E-8 T 25-04-2016 IPR012505 YbbR-like SMA_RS07115 b5ff50a8d667c2e2ef9e2d5b18749762 318 Pfam PF07949 YbbR-like protein 150 227 2.4E-7 T 25-04-2016 IPR012505 YbbR-like SMA_RS01015 a20b158dc1c09a1252aa6b1112871866 417 Gene3D G3DSA:1.20.1250.20 16 195 1.4E-7 T 25-04-2016 SMA_RS01015 a20b158dc1c09a1252aa6b1112871866 417 SUPERFAMILY SSF103473 16 403 3.92E-27 T 25-04-2016 IPR020846 Major facilitator superfamily domain SMA_RS01015 a20b158dc1c09a1252aa6b1112871866 417 Gene3D G3DSA:1.20.1250.20 223 401 4.7E-8 T 25-04-2016 SMA_RS01015 a20b158dc1c09a1252aa6b1112871866 417 PANTHER PTHR23513 1 401 8.2E-33 T 25-04-2016 SMA_RS01015 a20b158dc1c09a1252aa6b1112871866 417 Pfam PF07690 Major Facilitator Superfamily 19 361 6.9E-14 T 25-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SMA_RS02235 bb9946b2e0b82832b6c367b5c7436341 185 Pfam PF06042 Nucleotidyltransferase 22 181 2.5E-53 T 25-04-2016 IPR009267 Putative nucleotidyltransferase SMA_RS02235 bb9946b2e0b82832b6c367b5c7436341 185 PANTHER PTHR39166 1 185 8.1E-47 T 25-04-2016 SMA_RS07380 b6334018a894bbd0047431acd7bce8b0 292 Pfam PF01925 Sulfite exporter TauE/SafE 6 149 4.5E-8 T 25-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 SMA_RS04615 f2c667a663587adbd396caefac92d16a 231 PANTHER PTHR33498:SF1 1 220 1.5E-59 T 25-04-2016 SMA_RS04615 f2c667a663587adbd396caefac92d16a 231 Pfam PF01610 Transposase 157 220 1.2E-9 T 25-04-2016 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain SMA_RS04615 f2c667a663587adbd396caefac92d16a 231 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 92 140 1.8E-9 T 25-04-2016 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain SMA_RS04615 f2c667a663587adbd396caefac92d16a 231 PANTHER PTHR33498 1 220 1.5E-59 T 25-04-2016 SMA_RS04615 f2c667a663587adbd396caefac92d16a 231 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 41 85 1.2E-8 T 25-04-2016 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger SMA_RS00710 dbe4d1c80a911ea8fa3689e2bb53a64e 97 Pfam PF11773 Type II secretory pathway pseudopilin 13 94 5.2E-32 T 25-04-2016 IPR021749 Type II secretory pathway pseudopilin SMA_RS09250 2bb4d49cab1f89434235e8a05916f462 103 Pfam PF08951 Enterocin A Immunity 6 79 1.2E-16 T 25-04-2016 IPR015046 Enterocin A Immunity SMA_RS00865 46059b695d1c26938b03051ef0822a21 282 Pfam PF03609 PTS system sorbose-specific iic component 5 254 5.9E-66 T 25-04-2016 IPR004700 Phosphotransferase system, sorbose-specific IIC subunit GO:0009401|GO:0016021 SMA_RS10285 dc907911122f4624a3cf13a5c1ee96a9 152 Gene3D G3DSA:3.40.630.30 2 152 1.7E-19 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMA_RS10285 dc907911122f4624a3cf13a5c1ee96a9 152 SUPERFAMILY SSF55729 1 139 5.66E-18 T 25-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMA_RS10285 dc907911122f4624a3cf13a5c1ee96a9 152 Pfam PF00583 Acetyltransferase (GNAT) family 55 130 3.2E-8 T 25-04-2016 IPR000182 GNAT domain GO:0008080 SMA_RS07045 a712129ec49c6162313fa07f15de5413 349 Pfam PF16813 CRISPR-associated protein Csn2 subfamily St 6 346 1.7E-94 T 25-04-2016 IPR031820 CRISPR-associated protein Csn2 subfamily St SMA_RS09775 00bc1941f3c59aab5a2399c24e4400d5 207 Pfam PF06970 Replication initiator protein A (RepA) N-terminus 16 90 2.0E-27 T 25-04-2016 IPR010724 Replication initiator A, N-terminal SMA_RS05040 bac070cae162a908eae1ffb9575178ad 111 PANTHER PTHR34047 1 110 4.4E-36 T 25-04-2016 SMA_RS05040 bac070cae162a908eae1ffb9575178ad 111 SUPERFAMILY SSF56672 16 110 8.45E-12 T 25-04-2016 SMA_RS05125 df43596ef324d2825314bba129628eb5 136 Pfam PF14015 Protein of unknown function (DUF4231) 21 118 1.3E-15 T 25-04-2016 IPR025325 Protein of unknown function DUF4231 SMA_RS06785 374bd750f70c0bba2a94554b5426ac84 621 Pfam PF11083 Lantibiotic streptin immunity protein 516 606 4.0E-35 T 25-04-2016 IPR021112 Lantibiotic streptin immunity protein SMA_RS06785 374bd750f70c0bba2a94554b5426ac84 621 Pfam PF03432 Relaxase/Mobilisation nuclease domain 11 250 6.9E-55 T 25-04-2016 IPR005094 Endonuclease relaxase, MobA/VirD2 SMA_RS04310 92b418a410646552d0bc43ca8be076eb 281 PANTHER PTHR37308 1 278 2.4E-51 T 25-04-2016 SMA_RS04310 92b418a410646552d0bc43ca8be076eb 281 Pfam PF04018 Domain of unknown function (DUF368) 19 235 1.2E-31 T 25-04-2016 IPR007163 Protein of unknown function DUF368 SMA_RS01910 7bb21c431d2afaefe710784a3e4cfbdd 631 Pfam PF09972 Predicted membrane protein (DUF2207) 29 561 1.3E-81 T 25-04-2016 IPR018702 Protein of unknown function DUF2207, membrane SMA_RS06960 e9bbe661ee5d9598e766fe01cb42fad9 117 Pfam PF12666 PrgI family protein 4 90 1.6E-17 T 25-04-2016 IPR024414 Uncharacterised protein family PrgI SMA_RS04780 1bb979d6bdf1edd5a648097131f7d63e 128 Gene3D G3DSA:3.30.450.20 3 116 7.8E-9 T 25-04-2016 SMA_RS08170 3c20382d5de07014d86310115b533b67 218 Pfam PF08820 Domain of unknown function (DUF1803) 4 93 6.2E-34 T 25-04-2016 IPR014924 Protein of unknown function DUF1803 SMA_RS06965 7382940efe876cccb079920c85ffce1a 284 Pfam PF04610 TrbL/VirB6 plasmid conjugal transfer protein 133 269 1.3E-6 T 25-04-2016 IPR007688 Plasmid conjugal transfer TrbL/VirB6 GO:0030255 SMA_RS09310 b57a20c1165b6444f65f22b21e7f2f6a 77 TIGRFAM TIGR01847 bacteriocin_sig: bacteriocin-type signal sequence 9 23 0.0068 T 25-04-2016 IPR010133 Bacteriocin-type signal sequence SMA_RS09310 b57a20c1165b6444f65f22b21e7f2f6a 77 Pfam PF10439 Bacteriocin class II with double-glycine leader peptide 6 63 1.1E-12 T 25-04-2016 IPR019493 Bacteriocin, class IIb, lactacin-related GO:0042742 SMA_RS06440 d205c3a7c0e809496fade86fcad1ee35 422 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 336 409 4.0E-8 T 25-04-2016 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain SMA_RS03545 c125811e3072bffe669c92f69cf41944 191 Pfam PF09359 VTC domain 10 160 3.9E-17 T 25-04-2016 IPR018966 VTC domain SMA_RS06375 8ece7aeff8ba05775ab06a54b37519c6 164 Gene3D G3DSA:3.10.350.10 119 146 8.0E-4 T 25-04-2016 IPR018392 LysM domain SMA_RS09585 aab35c9971a0508830ca8be54dc901a2 140 Pfam PF01609 Transposase DDE domain 11 129 9.3E-17 T 25-04-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 SMA_RS01630 7cf40cc4668cdef578d23f1b767a375d 155 Pfam PF07155 ECF-type riboflavin transporter, S component 4 149 1.0E-26 T 25-04-2016 IPR009825 ECF transporter, substrate-specific component-like GO:0016020 SMA_RS00980 51248119f608c2d4265d4b518ff19b6b 73 Pfam PF15507 Domain of unknown function (DUF4649) 2 70 4.6E-31 T 25-04-2016 IPR027879 Protein of unknown function DUF4649 SMA_RS05765 aa58a9377217d85e6c1e59572fa65315 98 Pfam PF01719 Plasmid replication protein 7 94 1.7E-27 T 25-04-2016 IPR002631 Plasmid replication protein GO:0003677|GO:0003916|GO:0005727|GO:0006260 SMA_RS06940 b6c057d3d701947b3cc721a6144754ad 284 Pfam PF08843 Nucleotidyl transferase AbiEii toxin, Type IV TA system 37 266 1.5E-28 T 25-04-2016 IPR014942 Nucleotidyl transferase AbiEii toxin, Type IV TA system SMA_RS09375 7ca6124691e3a2cb7747f7d738f4c494 478 TIGRFAM TIGR01167 LPXTG_anchor: LPXTG cell wall anchor domain 443 476 1.9E-5 T 25-04-2016 IPR019931 LPXTG cell wall anchor domain SMA_RS10435 f1ab62f9e8de513e141512d83660ec2d 109 Pfam PF07374 Protein of unknown function (DUF1492) 39 106 2.9E-5 T 25-04-2016 IPR010861 Protein of unknown function DUF1492 SMA_RS02630 7ce2307a20cc833dc4ccef7ebe7ab049 314 Gene3D G3DSA:1.25.40.10 93 169 3.8E-4 T 25-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SMA_RS03430 6c67e65e5f8b963700704e0d8ae2b539 188 TIGRFAM TIGR02357 ECF_ThiT_YuaJ: energy-coupled thiamine transporter ThiT 9 185 3.2E-62 T 25-04-2016 IPR012651 Thiamine transporter ThiT GO:0005886|GO:0015234|GO:0015888 SMA_RS03430 6c67e65e5f8b963700704e0d8ae2b539 188 Pfam PF09515 Thiamine transporter protein (Thia_YuaJ) 11 184 3.5E-57 T 25-04-2016 IPR012651 Thiamine transporter ThiT GO:0005886|GO:0015234|GO:0015888 SMA_RS03430 6c67e65e5f8b963700704e0d8ae2b539 188 PANTHER PTHR41316 3 185 4.5E-36 T 25-04-2016 SMA_RS08965 a9f3c95ff0191d1eff47462518ed4e3e 182 Pfam PF02674 Colicin V production protein 2 162 4.1E-24 T 25-04-2016 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 SMA_RS05190 dc0fca9d1dbbe226a35a231b85f4b7b0 190 Pfam PF12822 Protein of unknown function (DUF3816) 10 181 1.4E-18 T 25-04-2016 IPR024529 ECF transporter, substrate-specific component GO:0005215 SMA_RS06990 2f14ef91a4c482393da11377245b3120 77 Gene3D G3DSA:1.10.260.40 5 76 1.0E-5 T 25-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SMA_RS02830 ebf75aacd906f396c0f1b9850f6bc4bb 84 Pfam PF13061 Protein of unknown function (DUF3923) 6 70 1.5E-18 T 25-04-2016 IPR025037 Protein of unknown function DUF3923 SMA_RS08970 c353da11279355396077f6fb05f7f109 102 SUPERFAMILY SSF102829 12 86 2.22E-5 T 25-04-2016 IPR007838 Cell division protein ZapA-like SMA_RS10125 f4d0cb686e03c6b8f2c595ffefa1588d 529 PIRSF PIRSF031639 4 529 2.7E-199 T 25-04-2016 IPR016978 Putative competence-induced protein Ccs4 SMA_RS05760 c7ec4d9624a3f94ca92bf30c2907aadd 86 Pfam PF11372 Domain of unknown function (DUF3173) 3 74 7.7E-23 T 25-04-2016 IPR021512 Protein of unknown function DUF3173 SMA_RS06445 efbcd17f0bb607bc9bcdb7d8aee8928b 111 Pfam PF10066 Uncharacterized conserved protein (DUF2304) 6 108 6.0E-29 T 25-04-2016 IPR019277 Protein of unknown function DUF2304 SMA_RS01055 0914dd91b7feebc5c8bebbbfc9a980ec 299 Pfam PF14267 Domain of unknown function (DUF4357) 243 292 4.8E-15 T 25-04-2016 IPR025579 Domain of unknown function DUF4357 SMA_RS06190 d66e0d59c53fb91fcf9f2dca8b312510 161 Pfam PF09335 SNARE associated Golgi protein 45 161 1.8E-13 T 25-04-2016 IPR032816 SNARE associated Golgi protein SMA_RS06945 fe5cc15a632d7a222c93298c2ed88c74 197 Pfam PF13338 Transcriptional regulator, AbiEi antitoxin 30 98 4.3E-16 T 25-04-2016 IPR025159 Transcriptional regulator, AbiEi antitoxin SMA_RS03050 cdbcb415c787aa0714da0f965bfe2eca 84 Pfam PF02325 YGGT family 11 79 2.7E-16 T 25-04-2016 IPR003425 CCB3/YggT GO:0016020 SMA_RS06790 e93a44f82e440eb71cb87ae8d3677c1b 121 Pfam PF05713 Bacterial mobilisation protein (MobC) 62 103 3.1E-13 T 25-04-2016 IPR008687 Bacterial mobilisation SMA_RS09835 65c9017248d3fe4ef32a432dd6bb218c 135 SUPERFAMILY SSF54518 1 124 2.35E-18 T 25-04-2016 IPR025659 Tubby C-terminal-like domain SMA_RS03085 0c05915df3c4d2f56d24507d88001245 183 Pfam PF11683 Protein of unknown function (DUF3278) 12 135 1.5E-24 T 25-04-2016 IPR021697 Protein of unknown function DUF3278 SMA_RS06035 6d94085dfd28982b46bc7e85b0197248 165 Pfam PF03729 Short repeat of unknown function (DUF308) 121 163 4.8E-4 T 25-04-2016 IPR005325 Protein of unknown function DUF308, membrane SMA_RS06035 6d94085dfd28982b46bc7e85b0197248 165 Pfam PF03729 Short repeat of unknown function (DUF308) 62 111 2.5E-5 T 25-04-2016 IPR005325 Protein of unknown function DUF308, membrane SMA_RS06035 6d94085dfd28982b46bc7e85b0197248 165 Pfam PF03729 Short repeat of unknown function (DUF308) 8 74 1.1E-10 T 25-04-2016 IPR005325 Protein of unknown function DUF308, membrane SMA_RS06735 5493f79ee06866ea8986640ab3a60b13 245 Pfam PF12730 ABC-2 family transporter protein 5 183 2.6E-11 T 25-04-2016 IPR032688 ABC-2 family transporter protein GO:0006810 SMA_RS06925 a39e48794bb43bab13d5af7ef8324eb8 63 Gene3D G3DSA:4.10.1080.10 9 42 6.2E-6 T 25-04-2016 IPR028974 TSP type-3 repeat GO:0005509 SMA_RS07940 fec140232bb8da5b569bfdc991a5bf21 78 Pfam PF11195 Protein of unknown function (DUF2829) 2 76 3.1E-21 T 25-04-2016 IPR021361 Protein of unknown function DUF2829