smi_0001 IPR001957 Chromosomal replication control, initiator DnaA smi_0001 IPR003593 AAA+ ATPase domain smi_0001 IPR010921 Trp repressor/replication initiator smi_0001 IPR013159 Chromosomal replication initiator, DnaA C-terminal smi_0001 IPR013317 Chromosomal replication control, initiator (DnaA)/regulator (Hda) smi_0001 IPR018312 Chromosomal replication control, initiator DnaA, conserved site smi_0001 IPR020591 Chromosomal replication control, initiator DnaA-like smi_0001 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0002 IPR001001 DNA polymerase III, beta chain smi_0002 IPR022634 DNA polymerase III, beta chain, N-terminal smi_0002 IPR022635 DNA polymerase III, beta chain, C-terminal smi_0002 IPR022637 DNA polymerase III, beta chain, central smi_0003 IPR009296 Protein of unknown function DUF951 smi_0004 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 smi_0004 IPR006073 GTP binding domain smi_0004 IPR012675 Beta-grasp domain smi_0004 IPR012676 TGS-like smi_0004 IPR013029 Domain of unknown function DUF933 smi_0004 IPR023192 TGS-like domain smi_0004 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0005 IPR001328 Peptidyl-tRNA hydrolase smi_0005 IPR018171 Peptidyl-tRNA hydrolase, conserved site smi_0006 IPR001650 Helicase, C-terminal smi_0006 IPR003711 CarD-like/TRCF domain smi_0006 IPR004576 Transcription-repair coupling factor smi_0006 IPR005118 Transcription-repair-coupling factor, C-terminal domain smi_0006 IPR011545 DEAD/DEAH box helicase domain smi_0006 IPR014001 Helicase, superfamily 1/2, ATP-binding domain smi_0006 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0007 IPR002942 RNA-binding S4 domain smi_0007 IPR025490 RNA-binding protein, HP1423 type smi_0008 IPR007060 Septum formation initiator FtsL/DivIC smi_0009 IPR012338 Beta-lactamase/transpeptidase-like smi_0010 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase smi_0010 IPR012094 Lysidine-tRNA(Ile) synthetase smi_0010 IPR012795 Lysidine-tRNA(Ile) synthetase, N-terminal smi_0010 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal smi_0010 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold smi_0010 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 smi_0011 IPR000836 Phosphoribosyltransferase domain smi_0011 IPR005904 Hypoxanthine phosphoribosyl transferase smi_0011 IPR029057 Phosphoribosyltransferase-like smi_0012 IPR000642 Peptidase M41 smi_0012 IPR003593 AAA+ ATPase domain smi_0012 IPR003959 ATPase, AAA-type, core smi_0012 IPR003960 ATPase, AAA-type, conserved site smi_0012 IPR005936 Peptidase, FtsH smi_0012 IPR011546 Peptidase M41, FtsH extracellular smi_0012 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0013 IPR013325 RNA polymerase sigma factor, region 2 smi_0014 IPR012337 Ribonuclease H-like domain smi_0014 IPR025246 Transposase IS30-like HTH domain smi_0022 IPR001114 Adenylosuccinate synthetase smi_0022 IPR018220 Adenylosuccinate synthase, active site smi_0022 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0022 IPR033128 smi_0022 smi_0024 IPR016192 APOBEC/CMP deaminase, zinc-binding smi_0024 IPR016193 Cytidine deaminase-like smi_0024 IPR028883 tRNA-specific adenosine deaminase smi_0026 IPR008180 Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase smi_0026 IPR029054 dUTPase-like smi_0027 IPR013078 Histidine phosphatase superfamily, clade-1 smi_0027 IPR029033 Histidine phosphatase superfamily smi_0028 IPR003593 AAA+ ATPase domain smi_0028 IPR004504 DNA repair protein RadA smi_0028 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup smi_0028 IPR020568 Ribosomal protein S5 domain 2-type fold smi_0028 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0029 IPR002838 Mitochondrial biogenesis protein AIM24 smi_0029 IPR016031 Tryptophan RNA-binding attenuator protein-like domain smi_0030 IPR001765 Carbonic anhydrase smi_0031 IPR026898 Protease PrsW smi_0032 IPR012337 Ribonuclease H-like domain smi_0032 IPR025246 Transposase IS30-like HTH domain smi_0033 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site smi_0033 IPR005946 Ribose-phosphate diphosphokinase smi_0033 IPR029057 Phosphoribosyltransferase-like smi_0033 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain smi_0034 IPR010106 Conserved hypothetical protein CHP01784 smi_0037 IPR018337 Cell wall/choline-binding repeat smi_0038 IPR018337 Cell wall/choline-binding repeat smi_0039 IPR008878 Transposase IS66, Orf2 smi_0040 IPR004291 Transposase, IS66 smi_0040 IPR024474 Zinc-finger binding domain of transposase IS66 smi_0041 IPR004291 Transposase, IS66 smi_0042 IPR012337 Ribonuclease H-like domain smi_0042 IPR025246 Transposase IS30-like HTH domain smi_0043 IPR003959 ATPase, AAA-type, core smi_0043 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0044 IPR025591 RloB-like protein smi_0045 IPR009057 Homeodomain-like smi_0045 IPR011991 Winged helix-turn-helix DNA-binding domain smi_0045 IPR025959 Winged helix-turn helix domain smi_0046 IPR012337 Ribonuclease H-like domain smi_0047 IPR010106 Conserved hypothetical protein CHP01784 smi_0048 IPR001098 DNA-directed DNA polymerase, family A, palm domain smi_0048 IPR002298 DNA polymerase A smi_0048 IPR002421 5'-3' exonuclease, N-terminal smi_0048 IPR002562 3'-5' exonuclease domain smi_0048 IPR008918 Helix-hairpin-helix motif, class 2 smi_0048 IPR012337 Ribonuclease H-like domain smi_0048 IPR018320 DNA polymerase 1 smi_0048 IPR019760 DNA-directed DNA polymerase, family A, conserved site smi_0048 IPR020045 5'-3' exonuclease, C-terminal domain smi_0048 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal smi_0048 IPR029060 PIN domain-like smi_0049 IPR003781 CoA-binding smi_0049 IPR016040 NAD(P)-binding domain smi_0050 IPR018383 Uncharacterised protein family UPF0324, prokaryote smi_0051 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site smi_0051 IPR004839 Aminotransferase, class I/classII smi_0051 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 smi_0051 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 smi_0051 IPR015424 Pyridoxal phosphate-dependent transferase smi_0052 IPR003717 Recombination protein O, RecO smi_0052 IPR012340 Nucleic acid-binding, OB-fold smi_0052 IPR022572 DNA replication/recombination mediator RecO, N-terminal smi_0053 IPR003664 Fatty acid synthesis PlsX protein smi_0053 IPR012281 Phospholipid biosynthesis protein, PlsX-like smi_0053 IPR024084 Isopropylmalate dehydrogenase-like domain smi_0054 IPR003231 Acyl carrier protein (ACP) smi_0054 IPR009081 Acyl carrier protein-like smi_0055 IPR018337 Cell wall/choline-binding repeat smi_0056 IPR001387 Cro/C1-type helix-turn-helix domain smi_0056 IPR010982 Lambda repressor-like, DNA-binding domain smi_0057 IPR018337 Cell wall/choline-binding repeat smi_0057.1 IPR004288 Competence protein, ComC smi_0058 IPR003594 Histidine kinase-like ATPase, C-terminal domain smi_0058 IPR032834 smi_0058 smi_0059 IPR001789 Signal transduction response regulator, receiver domain smi_0059 IPR007492 LytTR DNA-binding domain smi_0059 IPR011006 CheY-like superfamily smi_0059.1 IPR019493 Bacteriocin, class IIb, lactacin-related smi_0060 IPR023991 Bacteriocin, class IIb, lactobin A/cerein 7B family smi_0061 IPR023991 Bacteriocin, class IIb, lactobin A/cerein 7B family smi_0064 IPR003439 ABC transporter-like smi_0064 IPR003593 AAA+ ATPase domain smi_0064 IPR005074 Peptidase C39, bacteriocin processing smi_0064 IPR005897 Peptidase C39, ABC-type bacteriocin transporter smi_0064 IPR011527 ABC transporter type 1, transmembrane domain smi_0064 IPR017871 ABC transporter, conserved site smi_0064 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0065 IPR005696 Mesentericin y105 secretion protein smi_0066 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase smi_0066 IPR013816 ATP-grasp fold, subdomain 2 smi_0066 IPR018236 SAICAR synthetase, conserved site smi_0066 IPR028923 SAICAR synthetase/ADE2, N-terminal smi_0067 IPR010141 Phosphoribosylformylglycinamidine synthase, FGAM smi_0067 IPR010918 AIR synthase-related protein, C-terminal domain smi_0067 IPR016188 PurM, N-terminal-like smi_0067 IPR029062 Class I glutamine amidotransferase-like smi_0068 IPR000836 Phosphoribosyltransferase domain smi_0068 IPR005854 Amidophosphoribosyl transferase smi_0068 IPR029055 Nucleophile aminohydrolases, N-terminal smi_0068 IPR029057 Phosphoribosyltransferase-like smi_0069 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase smi_0069 IPR010918 AIR synthase-related protein, C-terminal domain smi_0069 IPR016188 PurM, N-terminal-like smi_0070 IPR002376 Formyl transferase, N-terminal smi_0070 IPR004607 Phosphoribosylglycinamide formyltransferase smi_0071 IPR000182 GNAT domain smi_0071 IPR016181 Acyl-CoA N-acyltransferase smi_0072 IPR002695 AICARFT/IMPCHase bienzyme smi_0072 IPR011607 Methylglyoxal synthase-like domain smi_0072 IPR016193 Cytidine deaminase-like smi_0072 IPR024051 AICAR transformylase domain smi_0073 IPR000115 Phosphoribosylglycinamide synthetase smi_0073 IPR011054 Rudiment single hybrid motif smi_0073 IPR013815 ATP-grasp fold, subdomain 1 smi_0073 IPR013816 ATP-grasp fold, subdomain 2 smi_0073 IPR016185 Pre-ATP-grasp domain smi_0073 IPR020559 Phosphoribosylglycinamide synthetase, conserved site smi_0073 IPR020560 Phosphoribosylglycinamide synthetase, C-domain smi_0073 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain smi_0073 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal smi_0074 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain smi_0074 IPR024694 N5-carboxyaminoimidazole ribonucleotide mutase PurE smi_0075 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type smi_0075 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit smi_0075 IPR011054 Rudiment single hybrid motif smi_0075 IPR013815 ATP-grasp fold, subdomain 1 smi_0075 IPR013816 ATP-grasp fold, subdomain 2 smi_0075 IPR016185 Pre-ATP-grasp domain smi_0076 IPR000362 Fumarate lyase family smi_0076 IPR004769 Adenylosuccinate lyase smi_0076 IPR008948 L-Aspartase-like smi_0076 IPR019468 Adenylosuccinate lyase C-terminal smi_0076 IPR020557 Fumarate lyase, conserved site smi_0076 IPR022761 Fumarate lyase, N-terminal smi_0076 IPR024083 Fumarase/histidase, N-terminal smi_0077 IPR002560 Transposase IS204/IS1001/IS1096/IS1165 smi_0077 IPR009057 Homeodomain-like smi_0077 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger smi_0077 IPR032877 smi_0077 smi_0078 IPR000524 Transcription regulator HTH, GntR smi_0078 IPR011663 UbiC transcription regulator-associated smi_0078 IPR011991 Winged helix-turn-helix DNA-binding domain smi_0078 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain smi_0079 IPR001944 Glycoside hydrolase, family 35 smi_0079 IPR008979 Galactose-binding domain-like smi_0079 IPR013781 Glycoside hydrolase, catalytic domain smi_0079 IPR017853 Glycoside hydrolase, superfamily smi_0079 IPR026283 Beta-galactosidase 1-like smi_0079 IPR031330 smi_0079 smi_0080 IPR004720 Phosphotransferase system, sorbose subfamily IIB component smi_0081 IPR004700 Phosphotransferase system, sorbose-specific IIC subunit smi_0082 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component smi_0083 IPR004701 Phosphotransferase system, mannose-type IIA component smi_0084 IPR001347 Sugar isomerase (SIS) smi_0086 IPR014044 CAP domain smi_0086 IPR018337 Cell wall/choline-binding repeat smi_0087 IPR000845 Nucleoside phosphorylase domain smi_0088 IPR003445 Cation transporter smi_0089 IPR003148 Regulator of K+ conductance, N-terminal smi_0089 IPR006037 Regulator of K+ conductance, C-terminal smi_0089 IPR016040 NAD(P)-binding domain smi_0090 IPR001173 Glycosyltransferase 2-like smi_0090 IPR029044 Nucleotide-diphospho-sugar transferases smi_0091 IPR005877 YSIRK Gram-positive signal peptide smi_0091 IPR019931 LPXTG cell wall anchor domain smi_0091 IPR021021 Fibronectin-binding repeat, SSURE smi_0092 IPR001789 Signal transduction response regulator, receiver domain smi_0092 IPR001867 Signal transduction response regulator, C-terminal smi_0092 IPR011006 CheY-like superfamily smi_0092 IPR011991 Winged helix-turn-helix DNA-binding domain smi_0093 IPR003594 Histidine kinase-like ATPase, C-terminal domain smi_0093 IPR003660 HAMP linker domain smi_0093 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain smi_0093 IPR004358 Signal transduction histidine kinase-related protein, C-terminal smi_0094 IPR001912 Ribosomal protein S4/S9, N-terminal smi_0094 IPR002942 RNA-binding S4 domain smi_0094 IPR005709 Ribosomal protein S4, bacterial-type smi_0094 IPR018079 Ribosomal protein S4, conserved site smi_0094 IPR022801 Ribosomal protein S4/S9 smi_0097 IPR025983 Cysteine-rich CPCC domain smi_0098 IPR025983 Cysteine-rich CPCC domain smi_0099 IPR007337 RelB antitoxin/Antitoxin DinJ smi_0100 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family smi_0102 IPR008863 Toxic anion resistance smi_0103 IPR001845 HTH ArsR-type DNA-binding domain smi_0103 IPR011991 Winged helix-turn-helix DNA-binding domain smi_0103 IPR018334 ArsR-type transcription regulator, HTH motif smi_0104 IPR004676 Cadmium resistance transporter smi_0105 IPR001705 Ribosomal protein L33 smi_0105 IPR011332 Zinc-binding ribosomal protein smi_0105 IPR018264 Ribosomal protein L33, conserved site smi_0106 IPR002677 Ribosomal protein L32p smi_0106 IPR011332 Zinc-binding ribosomal protein smi_0107 IPR012337 Ribonuclease H-like domain smi_0107 IPR025246 Transposase IS30-like HTH domain smi_0107.1 IPR010985 Ribbon-helix-helix smi_0107.1 IPR013321 Arc-type ribbon-helix-helix smi_0108 IPR002178 PTS EIIA type-2 domain smi_0108 IPR003501 Phosphotransferase system, EIIB component, type 2/3 smi_0108 IPR011608 PRD domain smi_0108 IPR016152 Phosphotransferase/anion transporter smi_0109 IPR003501 Phosphotransferase system, EIIB component, type 2/3 smi_0110 IPR004703 Phosphotransferase system, sugar-specific permease component smi_0111 IPR005474 Transketolase, N-terminal smi_0111 IPR029061 Thiamin diphosphate-binding fold smi_0111 IPR033247 smi_0111 smi_0112 IPR005475 Transketolase-like, pyrimidine-binding domain smi_0112 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II smi_0112 IPR029061 Thiamin diphosphate-binding fold smi_0112 IPR033247 smi_0112 smi_0112 IPR033248 smi_0112 smi_0113 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase smi_0113 IPR004404 Dihydroxy-acid dehydratase smi_0113 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel smi_0113 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site smi_0114 IPR002744 Domain of unknown function DUF59 smi_0116 IPR001387 Cro/C1-type helix-turn-helix domain smi_0116 IPR010057 Transcription activator MutR, C-terminal smi_0116 IPR010982 Lambda repressor-like, DNA-binding domain smi_0117 IPR020846 Major facilitator superfamily domain smi_0118 IPR004154 Anticodon-binding smi_0118 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit smi_0118 IPR015807 Histidine-tRNA ligase smi_0120 IPR001387 Cro/C1-type helix-turn-helix domain smi_0120 IPR010982 Lambda repressor-like, DNA-binding domain smi_0122 IPR021509 Protein of unknown function DUF3169 smi_0123 IPR003439 ABC transporter-like smi_0123 IPR003593 AAA+ ATPase domain smi_0123 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0125 IPR003675 CAAX amino terminal protease smi_0127 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb smi_0127 IPR004115 GAD-like domain smi_0127 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) smi_0127 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type smi_0127 IPR004524 Aspartate-tRNA ligase, class IIb, bacterial/mitochondrial-type smi_0127 IPR012340 Nucleic acid-binding, OB-fold smi_0127 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like smi_0127 IPR029351 GAD domain smi_0128 IPR003740 Membrane Protein of unknown function DUF161 smi_0128 IPR019264 Domain of unknown function DUF2179 smi_0129 IPR000843 Transcription regulator HTH, LacI smi_0129 IPR001761 Periplasmic binding protein/LacI sugar binding domain smi_0129 IPR010982 Lambda repressor-like, DNA-binding domain smi_0129 IPR028082 Periplasmic binding protein-like I smi_0130 IPR009574 Protein of unknown function DUF1189 smi_0131 IPR000515 MetI-like domain smi_0132 IPR000515 MetI-like domain smi_0133 IPR006060 Maltose binding protein smi_0133 IPR006061 Bacterial extracellular solute-binding family 1, conserved site smi_0134 IPR003385 Glycoside hydrolase, family 77 smi_0134 IPR013781 Glycoside hydrolase, catalytic domain smi_0134 IPR017853 Glycoside hydrolase, superfamily smi_0135 IPR000811 Glycosyl transferase, family 35 smi_0135 IPR011833 Glycogen/starch/alpha-glucan phosphorylase smi_0136 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted smi_0136 IPR025714 Methyltransferase domain smi_0136 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like smi_0138 IPR001757 Cation-transporting P-type ATPase smi_0138 IPR008250 P-type ATPase, A domain smi_0138 IPR018303 P-type ATPase, phosphorylation site smi_0138 IPR023214 HAD-like domain smi_0138 IPR023299 P-type ATPase, cytoplasmic domain N smi_0138 IPR027256 Cation-transporting P-type ATPase, subfamily IB smi_0139 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site smi_0139 IPR002305 Aminoacyl-tRNA synthetase, class Ic smi_0139 IPR002307 Tyrosine-tRNA ligase smi_0139 IPR002942 RNA-binding S4 domain smi_0139 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold smi_0139 IPR024088 Tyrosine-tRNA ligase, bacterial-type smi_0139 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 smi_0140 IPR012337 Ribonuclease H-like domain smi_0140 IPR025246 Transposase IS30-like HTH domain smi_0142 IPR000620 Drug/metabolite transporter smi_0143 IPR001451 Bacterial transferase hexapeptide repeat smi_0143 IPR011004 Trimeric LpxA-like smi_0143 IPR013710 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase, N-terminal smi_0143 IPR018357 Hexapeptide transferase, conserved site smi_0143 IPR019873 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase, DapH smi_0144 IPR002933 Peptidase M20 smi_0144 IPR011650 Peptidase M20, dimerisation domain smi_0144 IPR017439 Amidohydrolase smi_0144 IPR023905 Acetyldiaminopimelate deacetylase smi_0145 IPR002698 5-formyltetrahydrofolate cyclo-ligase smi_0145 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain smi_0146 IPR002610 Peptidase S54, rhomboid smi_0146 IPR022764 Peptidase S54, rhomboid domain smi_0147 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type smi_0147 IPR005835 Nucleotidyl transferase smi_0147 IPR029044 Nucleotide-diphospho-sugar transferases smi_0148 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal smi_0148 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent smi_0148 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like smi_0148 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal smi_0148 IPR013328 Dehydrogenase, multihelical smi_0148 IPR016040 NAD(P)-binding domain smi_0150 IPR001278 Arginine-tRNA ligase smi_0150 IPR005148 Arginyl tRNA synthetase N-terminal domain smi_0150 IPR008909 DALR anticodon binding smi_0150 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding smi_0150 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold smi_0151 IPR001669 Arginine repressor smi_0151 IPR011991 Winged helix-turn-helix DNA-binding domain smi_0151 IPR020899 Arginine repressor, C-terminal smi_0151 IPR020900 Arginine repressor, DNA-binding domain smi_0151 IPR024946 Arginine repressor C-terminal-like domain smi_0152 IPR000432 DNA mismatch repair protein MutS, C-terminal smi_0152 IPR005748 DNA mismatch repair protein MutS, type 1 smi_0152 IPR007695 DNA mismatch repair protein MutS-like, N-terminal smi_0152 IPR007696 DNA mismatch repair protein MutS, core smi_0152 IPR007860 DNA mismatch repair protein MutS, connector domain smi_0152 IPR007861 DNA mismatch repair protein MutS, clamp smi_0152 IPR016151 DNA mismatch repair protein MutS, N-terminal smi_0152 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0153 IPR003439 ABC transporter-like smi_0153 IPR003593 AAA+ ATPase domain smi_0153 IPR011527 ABC transporter type 1, transmembrane domain smi_0153 IPR017871 ABC transporter, conserved site smi_0153 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0154 IPR003439 ABC transporter-like smi_0154 IPR003593 AAA+ ATPase domain smi_0154 IPR011527 ABC transporter type 1, transmembrane domain smi_0154 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0155 IPR011697 Peptidase C26 smi_0155 IPR029062 Class I glutamine amidotransferase-like smi_0156 IPR002686 Transposase IS200-like smi_0157 IPR001672 Phosphoglucose isomerase (PGI) smi_0157 IPR018189 Phosphoglucose isomerase, conserved site smi_0158 IPR000924 Glutamyl/glutaminyl-tRNA synthetase smi_0158 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site smi_0158 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial smi_0158 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding smi_0158 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold smi_0158 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain smi_0158 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain smi_0158 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 smi_0159 IPR002125 CMP/dCMP deaminase, zinc-binding smi_0159 IPR016192 APOBEC/CMP deaminase, zinc-binding smi_0159 IPR016193 Cytidine deaminase-like smi_0177 IPR004843 Calcineurin-like phosphoesterase domain, apaH type smi_0177 IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase smi_0177 IPR029052 Metallo-dependent phosphatase-like smi_0178 IPR002145 Ribbon-helix-helix protein, copG smi_0179 IPR003607 HD/PDEase domain smi_0180 IPR002104 Integrase, catalytic smi_0180 IPR011010 DNA breaking-rejoining enzyme, catalytic core smi_0180 IPR013762 Integrase-like, catalytic core smi_0180 IPR023109 Integrase/recombinase, N-terminal smi_0180 IPR028259 AP2-like integrase, N-terminal domain smi_0181 IPR021512 Protein of unknown function DUF3173 smi_0183 IPR004843 Calcineurin-like phosphoesterase domain, apaH type smi_0183 IPR029052 Metallo-dependent phosphatase-like smi_0186 IPR002543 FtsK domain smi_0186 IPR003593 AAA+ ATPase domain smi_0186 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0188 IPR005135 Endonuclease/exonuclease/phosphatase smi_0193 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme smi_0193 IPR004450 Threonine synthase-like smi_0193 IPR029144 Threonine synthase, N-terminal smi_0194 IPR002528 Multi antimicrobial extrusion protein smi_0195 IPR006439 HAD hydrolase, subfamily IA smi_0195 IPR023214 HAD-like domain smi_0196 IPR018392 LysM domain smi_0197 IPR000816 Peptidase C15, pyroglutamyl peptidase I smi_0197 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like smi_0197 IPR029762 Pyroglutamyl peptidase I, bacterial-type smi_0198 IPR010380 Protein of unknown function DUF975 smi_0199 IPR002616 tRNA-guanine(15) transglycosylase-like smi_0199 IPR004803 Queuine tRNA-ribosyltransferase smi_0200 IPR002656 Acyltransferase 3 smi_0200 IPR013830 smi_0200 smi_0201 IPR012337 Ribonuclease H-like domain smi_0201 IPR025246 Transposase IS30-like HTH domain smi_0202 IPR003764 N-acetylglucosamine-6-phosphate deacetylase smi_0202 IPR006680 Amidohydrolase 1 smi_0202 IPR011059 Metal-dependent hydrolase, composite domain smi_0202 IPR032466 smi_0202 smi_0203 IPR002085 Alcohol dehydrogenase superfamily, zinc-type smi_0203 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site smi_0203 IPR011032 GroES (chaperonin 10)-like smi_0203 IPR013149 Alcohol dehydrogenase, C-terminal smi_0203 IPR013154 Alcohol dehydrogenase GroES-like smi_0203 IPR016040 NAD(P)-binding domain smi_0203 IPR020843 Polyketide synthase, enoylreductase smi_0204 IPR010434 Protein of unknown function DUF1033 smi_0205 IPR001482 Type II secretion system protein E smi_0205 IPR003593 AAA+ ATPase domain smi_0205 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0206 IPR003004 GspF/PilC family smi_0206 IPR018076 Type II secretion system F domain smi_0207 IPR000983 Bacterial general secretion pathway protein G-type pilin smi_0207 IPR012902 Prokaryotic N-terminal methylation site smi_0207 IPR016940 ComG operon protein C smi_0209 IPR021749 Type II secretory pathway pseudopilin smi_0210 IPR016977 Competence operon G, ComGF smi_0212 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like smi_0213 IPR003356 DNA methylase, adenine-specific smi_0213 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like smi_0214 IPR000890 Aliphatic acid kinase, short-chain smi_0214 IPR004372 Acetate/Proprionate kinase smi_0214 IPR023865 Aliphatic acid kinase, short-chain, conserved site smi_0215 IPR000100 Ribonuclease P smi_0215 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup smi_0215 IPR020539 Ribonuclease P, conserved site smi_0215 IPR020568 Ribosomal protein S5 domain 2-type fold smi_0216 IPR001708 Membrane insertase OXA1/ALB3/YidC smi_0216 IPR023060 Membrane insertase YidC/YidC1/YidC2, Firmicutes smi_0216 IPR028055 Membrane insertase YidC/Oxa1, C-terminal smi_0217 IPR001374 Single-stranded nucleic acid binding R3H smi_0217 IPR032782 smi_0217 smi_0219 IPR004703 Phosphotransferase system, sugar-specific permease component smi_0220 IPR003501 Phosphotransferase system, EIIB component, type 2/3 smi_0221 IPR002178 PTS EIIA type-2 domain smi_0221 IPR016152 Phosphotransferase/anion transporter smi_0222 IPR001754 Orotidine 5'-phosphate decarboxylase domain smi_0222 IPR011060 Ribulose-phosphate binding barrel smi_0222 IPR013785 Aldolase-type TIM barrel smi_0223 IPR004560 L-ribulose-5-phosphate 3-epimerase smi_0223 IPR013022 Xylose isomerase-like, TIM barrel domain smi_0224 IPR001303 Class II aldolase/adducin N-terminal smi_0225 IPR003501 Phosphotransferase system, EIIB component, type 2/3 smi_0225 IPR011608 PRD domain smi_0225 IPR011991 Winged helix-turn-helix DNA-binding domain smi_0225 IPR013196 Helix-turn-helix, type 11 smi_0226 IPR001279 Beta-lactamase-like smi_0227 IPR005474 Transketolase, N-terminal smi_0227 IPR005475 Transketolase-like, pyrimidine-binding domain smi_0227 IPR005478 Transketolase, bacterial-like smi_0227 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II smi_0227 IPR020826 Transketolase binding site smi_0227 IPR029061 Thiamin diphosphate-binding fold smi_0227 IPR033247 smi_0227 smi_0227 IPR033248 smi_0227 smi_0228 IPR003849 Preprotein translocase YajC smi_0229 IPR017867 Protein-tyrosine phosphatase, low molecular weight smi_0229 IPR023485 Phosphotyrosine protein phosphatase I superfamily smi_0230 IPR003409 MORN motif smi_0230 IPR014590 Uncharacterised conserved protein MORN repeat-containing smi_0231 IPR001670 Alcohol dehydrogenase, iron-type smi_0231 IPR012079 Bifunctional aldehyde-alcohol dehydrogenase smi_0231 IPR015590 Aldehyde dehydrogenase domain smi_0231 IPR016161 Aldehyde/histidinol dehydrogenase smi_0231 IPR016162 Aldehyde dehydrogenase, N-terminal smi_0231 IPR016163 Aldehyde dehydrogenase, C-terminal smi_0231 IPR018211 Alcohol dehydrogenase, iron-type, conserved site smi_0232 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I smi_0232 IPR016040 NAD(P)-binding domain smi_0232 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain smi_0232 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain smi_0232 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site smi_0232 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family smi_0233 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F smi_0233 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site smi_0233 IPR006225 Pseudouridine synthase, RluC/RluD smi_0233 IPR020103 Pseudouridine synthase, catalytic domain smi_0234 IPR001264 Glycosyl transferase, family 51 smi_0234 IPR001460 Penicillin-binding protein, transpeptidase smi_0234 IPR012338 Beta-lactamase/transpeptidase-like smi_0234 IPR023346 Lysozyme-like domain smi_0235 IPR012337 Ribonuclease H-like domain smi_0235 IPR025246 Transposase IS30-like HTH domain smi_0236 IPR001705 Ribosomal protein L33 smi_0236 IPR011332 Zinc-binding ribosomal protein smi_0237 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit smi_0237 IPR005807 SecE subunit of protein translocation complex smi_0238 IPR001062 Transcription antitermination protein, NusG smi_0238 IPR005824 KOW smi_0238 IPR006645 NusG, N-terminal smi_0238 IPR008991 Translation protein SH3-like domain smi_0238 IPR014722 Ribosomal protein L2 domain 2 smi_0239 IPR013325 RNA polymerase sigma factor, region 2 smi_0240 IPR012337 Ribonuclease H-like domain smi_0240 IPR025246 Transposase IS30-like HTH domain smi_0256 IPR003439 ABC transporter-like smi_0256 IPR003593 AAA+ ATPase domain smi_0256 IPR017871 ABC transporter, conserved site smi_0256 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0257 IPR000412 ABC-2 transporter smi_0257 IPR013525 ABC-2 type transporter smi_0258 IPR003594 Histidine kinase-like ATPase, C-terminal domain smi_0258 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain smi_0259 IPR000792 Transcription regulator LuxR, C-terminal smi_0259 IPR001789 Signal transduction response regulator, receiver domain smi_0259 IPR011006 CheY-like superfamily smi_0259 IPR011991 Winged helix-turn-helix DNA-binding domain smi_0259 IPR016032 Signal transduction response regulator, C-terminal effector smi_0260 IPR012337 Ribonuclease H-like domain smi_0260 IPR025246 Transposase IS30-like HTH domain smi_0261 IPR005679 Ribosomal protein S12, bacteria smi_0261 IPR006032 Ribosomal protein S12/S23 smi_0261 IPR012340 Nucleic acid-binding, OB-fold smi_0262 IPR000235 Ribosomal protein S5/S7 smi_0262 IPR005717 Ribosomal protein S7, bacterial/organellar-type smi_0262 IPR020606 Ribosomal protein S7, conserved site smi_0262 IPR023798 Ribosomal protein S7 domain smi_0263 IPR000640 Translation elongation factor EFG, V domain smi_0263 IPR000795 Elongation factor, GTP-binding domain smi_0263 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 smi_0263 IPR004540 Translation elongation factor EFG/EF2 smi_0263 IPR005225 Small GTP-binding protein domain smi_0263 IPR005517 Translation elongation factor EFG/EF2, domain IV smi_0263 IPR009000 Translation protein, beta-barrel domain smi_0263 IPR009022 Elongation factor G, III-V domain smi_0263 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup smi_0263 IPR020568 Ribosomal protein S5 domain 2-type fold smi_0263 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0263 IPR031157 smi_0263 smi_0264 IPR003141 Polymerase/histidinol phosphatase, N-terminal smi_0264 IPR004013 PHP, C-terminal smi_0264 IPR006054 DNA polymerase III, epsilon subunit smi_0264 IPR006308 DNA polymerase III, alpha subunit, Gram-positive type smi_0264 IPR011708 Bacterial DNA polymerase III, alpha subunit smi_0264 IPR012337 Ribonuclease H-like domain smi_0264 IPR012340 Nucleic acid-binding, OB-fold smi_0264 IPR013520 Exonuclease, RNase T/DNA polymerase III smi_0264 IPR016195 Polymerase/histidinol phosphatase-like smi_0264 IPR024754 DNA polymerase III polC-like, N-terminal domain II smi_0264 IPR028112 DNA polymerase III polC-type, N-terminal domain I smi_0265 IPR004386 Toxin-antitoxin system, YafQ-like toxin smi_0265 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family smi_0266 IPR000787 Peptidase M29, aminopeptidase II smi_0267 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F smi_0267 IPR002942 RNA-binding S4 domain smi_0267 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F smi_0267 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site smi_0267 IPR020103 Pseudouridine synthase, catalytic domain smi_0268 IPR000169 Cysteine peptidase, cysteine active site smi_0268 IPR004134 Peptidase C1B, bleomycin hydrolase smi_0268 IPR025660 Cysteine peptidase, histidine active site smi_0269 IPR002560 Transposase IS204/IS1001/IS1096/IS1165 smi_0269 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger smi_0271 IPR026906 Leucine rich repeat 5 smi_0272 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component smi_0272 IPR018405 Phosphotransferase system, mannose/fructose/sorbose family IID component, subgroup smi_0273 IPR004700 Phosphotransferase system, sorbose-specific IIC subunit smi_0274 IPR004701 Phosphotransferase system, mannose-type IIA component smi_0274 IPR004720 Phosphotransferase system, sorbose subfamily IIB component smi_0275 IPR002085 Alcohol dehydrogenase superfamily, zinc-type smi_0275 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site smi_0275 IPR011032 GroES (chaperonin 10)-like smi_0275 IPR013149 Alcohol dehydrogenase, C-terminal smi_0275 IPR013154 Alcohol dehydrogenase GroES-like smi_0275 IPR016040 NAD(P)-binding domain smi_0275 IPR020843 Polyketide synthase, enoylreductase smi_0276 IPR000150 Cof protein smi_0276 IPR006379 HAD-superfamily hydrolase, subfamily IIB smi_0276 IPR023214 HAD-like domain smi_0277 IPR006043 Xanthine/uracil/vitamin C permease smi_0277 IPR026033 Purine permease PbuG-like smi_0277 IPR029940 smi_0277 smi_0278 IPR003675 CAAX amino terminal protease smi_0279 IPR000489 Pterin-binding smi_0279 IPR006390 Dihydropteroate synthase smi_0279 IPR011005 Dihydropteroate synthase-like smi_0280 IPR001645 Folylpolyglutamate synthetase smi_0280 IPR004101 Mur ligase, C-terminal smi_0280 IPR013221 Mur ligase, central smi_0280 IPR018109 Folylpolyglutamate synthetase, conserved site smi_0281 IPR001474 GTP cyclohydrolase I smi_0281 IPR018234 GTP cyclohydrolase I, conserved site smi_0281 IPR020602 GTP cyclohydrolase I domain smi_0282 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK smi_0282 IPR006156 Dihydroneopterin aldolase smi_0282 IPR006157 Dihydroneopterin aldolase/epimerase domain smi_0283 IPR009303 Protein of unknown function DUF960 smi_0284 IPR000843 Transcription regulator HTH, LacI smi_0284 IPR006377 Catabolite control protein A smi_0284 IPR010982 Lambda repressor-like, DNA-binding domain smi_0284 IPR028082 Periplasmic binding protein-like I smi_0285 IPR006034 Asparaginase/glutaminase smi_0285 IPR020827 Asparaginase/glutaminase, active site 1 smi_0285 IPR027473 L-asparaginase, C-terminal domain smi_0285 IPR027474 L-asparaginase, N-terminal smi_0285 IPR027475 Asparaginase/glutaminase, active site 2 smi_0286 IPR000150 Cof protein smi_0286 IPR006379 HAD-superfamily hydrolase, subfamily IIB smi_0286 IPR017223 Predicted hydrolase of the HAD superfamily, SPs0319-type smi_0286 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like smi_0286 IPR023214 HAD-like domain smi_0286 IPR023292 NTP pyrophosphohydrolase-like domain smi_0287 IPR006015 Universal stress protein A smi_0287 IPR006016 UspA smi_0287 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold smi_0289 IPR004839 Aminotransferase, class I/classII smi_0289 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 smi_0289 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 smi_0289 IPR015424 Pyridoxal phosphate-dependent transferase smi_0290 IPR000271 Ribosomal protein L34 smi_0290 IPR020939 Ribosomal protein L34, conserved site smi_0291 IPR000914 Bacterial extracellular solute-binding protein, family 5 smi_0292 IPR002293 Amino acid/polyamine transporter I smi_0293 IPR001130 TatD family smi_0293 IPR015991 Uncharacterised deoxyribonuclease TatD-type smi_0293 IPR018228 Deoxyribonuclease, TatD-related, conserved site smi_0293 IPR032466 smi_0293 smi_0294 IPR004466 Ribonuclease M5 smi_0294 IPR006171 Toprim domain smi_0294 IPR025156 Ribonuclease M5, C-terminal domain smi_0295 IPR001737 Ribosomal RNA adenine methylase transferase smi_0295 IPR011530 Ribosomal RNA adenine dimethylase smi_0295 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site smi_0295 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal smi_0295 IPR023165 rRNA adenine dimethylase-like smi_0295 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like smi_0296 IPR004881 Ribosome biogenesis GTPase RsgA, putative smi_0296 IPR010914 EngC GTPase smi_0296 IPR012340 Nucleic acid-binding, OB-fold smi_0296 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0296 IPR031944 smi_0296 smi_0297 IPR000056 Ribulose-phosphate 3-epimerase-like smi_0297 IPR011060 Ribulose-phosphate binding barrel smi_0297 IPR013785 Aldolase-type TIM barrel smi_0297 IPR026019 Ribulose-phosphate 3-epimerase smi_0298 IPR006282 Thiamin pyrophosphokinase smi_0298 IPR007371 Thiamin pyrophosphokinase, catalytic domain smi_0298 IPR007373 Thiamin pyrophosphokinase, vitamin B1-binding domain smi_0299 IPR003798 DNA recombination RmuC smi_0300 IPR006674 HD domain smi_0300 IPR012340 Nucleic acid-binding, OB-fold smi_0301 IPR012337 Ribonuclease H-like domain smi_0301 IPR025246 Transposase IS30-like HTH domain smi_0302 IPR000836 Phosphoribosyltransferase domain smi_0302 IPR010078 Pur operon repressor smi_0302 IPR011991 Winged helix-turn-helix DNA-binding domain smi_0302 IPR015265 Bacterial purine repressor, N-terminal smi_0302 IPR029057 Phosphoribosyltransferase-like smi_0303 IPR000183 Ornithine/DAP/Arg decarboxylase smi_0303 IPR002986 Diaminopimelate decarboxylase, LysA smi_0303 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal smi_0303 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal smi_0303 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal smi_0303 IPR029066 PLP-binding barrel smi_0304 IPR001989 Radical-activating enzyme, conserved site smi_0304 IPR007197 Radical SAM smi_0304 IPR012838 Pyruvate formate-lyase activating enzyme smi_0305 IPR003439 ABC transporter-like smi_0305 IPR003593 AAA+ ATPase domain smi_0305 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0308 IPR001789 Signal transduction response regulator, receiver domain smi_0308 IPR001867 Signal transduction response regulator, C-terminal smi_0308 IPR011006 CheY-like superfamily smi_0308 IPR011991 Winged helix-turn-helix DNA-binding domain smi_0308 IPR016032 Signal transduction response regulator, C-terminal effector smi_0309 IPR003594 Histidine kinase-like ATPase, C-terminal domain smi_0309 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain smi_0310 IPR001708 Membrane insertase OXA1/ALB3/YidC smi_0310 IPR023060 Membrane insertase YidC/YidC1/YidC2, Firmicutes smi_0310 IPR028055 Membrane insertase YidC/Oxa1, C-terminal smi_0311 IPR001537 tRNA/rRNA methyltransferase, SpoU type smi_0311 IPR013123 RNA 2-O ribose methyltransferase, substrate binding smi_0311 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal smi_0311 IPR029028 Alpha/beta knot methyltransferases smi_0311 IPR029064 50S ribosomal protein L30e-like smi_0312 IPR006214 Bax inhibitor 1-related smi_0313 IPR004618 Aspartate--ammonia ligase smi_0314 IPR002052 DNA methylase, N-6 adenine-specific, conserved site smi_0314 IPR004398 RNA methyltransferase, RsmD smi_0314 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like smi_0315 IPR001980 Coenzyme A biosynthesis protein smi_0315 IPR004821 Cytidyltransferase-like domain smi_0315 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold smi_0316 IPR001478 PDZ domain smi_0316 IPR008269 Peptidase S16, Lon C-terminal smi_0316 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup smi_0316 IPR020568 Ribosomal protein S5 domain 2-type fold smi_0316 IPR027065 Lon protease smi_0317 IPR001986 Enolpyruvate transferase domain smi_0317 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase smi_0317 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta smi_0318 IPR024596 DNA-directed RNA polymerase subunit beta/EpuA smi_0319 IPR001604 DNA/RNA non-specific endonuclease smi_0319 IPR018524 DNA/RNA non-specific endonuclease, active site smi_0320 IPR000644 CBS domain smi_0320 IPR002550 Domain of unknown function DUF21 smi_0320 IPR005170 Transporter-associated domain smi_0320 IPR016166 FAD-binding, type 2 smi_0320 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 smi_0322 IPR000914 Bacterial extracellular solute-binding protein, family 5 smi_0322 IPR023765 Bacterial extracellular solute-binding protein, family 5, conserved site smi_0322 IPR030678 smi_0322 smi_0323 IPR000515 MetI-like domain smi_0324 IPR000515 MetI-like domain smi_0324 IPR025966 Oligopeptide transport permease C-like, N-terminal domain smi_0325 IPR003439 ABC transporter-like smi_0325 IPR003593 AAA+ ATPase domain smi_0325 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal smi_0325 IPR017871 ABC transporter, conserved site smi_0325 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0326 IPR003439 ABC transporter-like smi_0326 IPR003593 AAA+ ATPase domain smi_0326 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal smi_0326 IPR017871 ABC transporter, conserved site smi_0326 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0327 IPR007487 ABC transporter, substrate-binding protein smi_0327 IPR028082 Periplasmic binding protein-like I smi_0328 IPR001851 ABC transporter, permease smi_0329 IPR003439 ABC transporter-like smi_0329 IPR003593 AAA+ ATPase domain smi_0329 IPR017871 ABC transporter, conserved site smi_0329 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0330 IPR013780 Glycosyl hydrolase, family 13, all-beta smi_0331 IPR005359 Protein with unknown function UPF0154 smi_0332 IPR001920 Asp/Glu racemase smi_0332 IPR004391 Glutamate racemase smi_0332 IPR015942 Asp/Glu/hydantoin racemase smi_0332 IPR018187 Asp/Glu racemase, active site smi_0332 IPR033134 smi_0332 smi_0333 IPR002637 Ham1-like protein smi_0333 IPR020922 Non-canonical purine NTP pyrophosphatase smi_0333 IPR029001 Inosine triphosphate pyrophosphatase-like smi_0334 IPR000979 Phosphodiesterase MJ0936/Vps29 smi_0334 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type smi_0334 IPR029052 Metallo-dependent phosphatase-like smi_0335 IPR000644 CBS domain smi_0336 IPR002104 Integrase, catalytic smi_0336 IPR004107 Integrase, SAM-like, N-terminal smi_0336 IPR011010 DNA breaking-rejoining enzyme, catalytic core smi_0336 IPR013762 Integrase-like, catalytic core smi_0336 IPR020876 Tyrosine recombinase XerD-like smi_0336 IPR023109 Integrase/recombinase, N-terminal smi_0337 IPR003768 Prokaryotic chromosome segregation/condensation protein ScpA smi_0338 IPR005234 Chromosome segregation/condensation protein ScpB smi_0338 IPR011991 Winged helix-turn-helix DNA-binding domain smi_0339 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F smi_0339 IPR002942 RNA-binding S4 domain smi_0339 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F smi_0339 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site smi_0339 IPR020103 Pseudouridine synthase, catalytic domain smi_0340 IPR002696 Putative membrane protein insertion efficiency factor smi_0341 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain smi_0341 IPR005886 UDP-glucose 4-epimerase GalE smi_0341 IPR016040 NAD(P)-binding domain smi_0342 IPR008007 Peptidase M42 smi_0342 IPR017538 Peptidase M42, glutamyl aminopeptidase smi_0342 IPR023367 Peptidase M42, domain 2 smi_0344 IPR003841 Sodium-dependent phosphate transport protein smi_0344 IPR004633 Na/Pi-cotransporter II-related/YqeW-like protein smi_0344 IPR026022 PhoU domain smi_0345 IPR005201 Glycoside hydrolase, family 85 smi_0345 IPR005877 YSIRK Gram-positive signal peptide smi_0345 IPR011098 G5 domain smi_0345 IPR019931 LPXTG cell wall anchor domain smi_0345 IPR022038 Bacterial Ig-like domain smi_0345 IPR032979 smi_0345 smi_0346 IPR001576 Phosphoglycerate kinase smi_0346 IPR015824 Phosphoglycerate kinase, N-terminal smi_0346 IPR015901 Phosphoglycerate kinase, C-terminal smi_0346 IPR015911 Phosphoglycerate kinase, conserved site smi_0347 IPR010343 Protein of unknown function DUF939 smi_0348 IPR000551 MerR-type HTH domain smi_0348 IPR009061 DNA binding domain, putative smi_0349 IPR004809 Glutamine synthetase type I smi_0349 IPR008146 Glutamine synthetase, catalytic domain smi_0349 IPR008147 Glutamine synthetase, beta-Grasp smi_0349 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain smi_0349 IPR027302 Glutamine synthetase, N-terminal conserved site smi_0350 IPR005149 Transcription regulator PadR N-terminal smi_0350 IPR011991 Winged helix-turn-helix DNA-binding domain smi_0351 IPR021359 Protein of unknown function DUF2812 smi_0352 IPR021359 Protein of unknown function DUF2812 smi_0353 IPR002571 Heat-inducible transcription repressor HrcA smi_0353 IPR005104 Winged helix-turn-helix transcription repressor, HrcA DNA-binding domain smi_0353 IPR011991 Winged helix-turn-helix DNA-binding domain smi_0353 IPR021153 Heat-inducible transcription repressor HrcA, C-terminal smi_0353 IPR029016 GAF domain-like smi_0354 IPR000740 GrpE nucleotide exchange factor smi_0354 IPR009012 GrpE nucleotide exchange factor, head smi_0354 IPR013805 GrpE nucleotide exchange factor, coiled-coil smi_0355 IPR012725 Chaperone DnaK smi_0355 IPR013126 Heat shock protein 70 family smi_0355 IPR018181 Heat shock protein 70, conserved site smi_0355 IPR029047 Heat shock protein 70kD, peptide-binding domain smi_0355 IPR029048 Heat shock protein 70kD, C-terminal domain smi_0356 IPR002818 ThiJ/PfpI smi_0356 IPR029062 Class I glutamine amidotransferase-like smi_0357 IPR001305 Heat shock protein DnaJ, cysteine-rich domain smi_0357 IPR001623 DnaJ domain smi_0357 IPR002939 Chaperone DnaJ, C-terminal smi_0357 IPR008971 HSP40/DnaJ peptide-binding smi_0357 IPR012724 Chaperone DnaJ smi_0357 IPR018253 DnaJ domain, conserved site smi_0358 IPR002559 Transposase, IS4-like smi_0358 IPR008490 Transposase InsH, N-terminal smi_0360 IPR001310 Histidine triad (HIT) protein smi_0360 IPR011146 HIT-like domain smi_0360 IPR019808 Histidine triad, conserved site smi_0361 IPR003439 ABC transporter-like smi_0361 IPR003593 AAA+ ATPase domain smi_0361 IPR017871 ABC transporter, conserved site smi_0361 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0362 IPR010288 Bacterial ABC transporter EcsB smi_0364 IPR007492 LytTR DNA-binding domain smi_0365 IPR001789 Signal transduction response regulator, receiver domain smi_0365 IPR007492 LytTR DNA-binding domain smi_0365 IPR011006 CheY-like superfamily smi_0366 IPR003594 Histidine kinase-like ATPase, C-terminal domain smi_0366 IPR032834 smi_0366 smi_0372 IPR003675 CAAX amino terminal protease smi_0373 IPR002575 Aminoglycoside phosphotransferase smi_0373 IPR011009 Protein kinase-like domain smi_0374 IPR003358 tRNA (guanine-N-7) methyltransferase smi_0374 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like smi_0375 IPR003728 Ribosome maturation factor RimP smi_0375 IPR028989 Ribosome maturation factor RimP, N-terminal smi_0375 IPR028998 Ribosome maturation factor RimP, C-terminal smi_0376 IPR004087 K Homology domain smi_0376 IPR009019 K homology domain, prokaryotic type smi_0376 IPR010213 Transcription termination factor NusA smi_0376 IPR012340 Nucleic acid-binding, OB-fold smi_0376 IPR013735 Transcription factor NusA, N-terminal smi_0376 IPR015946 K homology domain-like, alpha/beta smi_0376 IPR025249 KH domain, NusA-like smi_0376 IPR030842 smi_0376 smi_0377 IPR007393 Domain of unknown function DUF448 smi_0378 IPR004038 Ribosomal protein L7Ae/L30e/S12e/Gadd45 smi_0378 IPR029064 50S ribosomal protein L30e-like smi_0379 IPR000178 Translation initiation factor aIF-2, bacterial-like smi_0379 IPR005225 Small GTP-binding protein domain smi_0379 IPR006847 Translation initiation factor IF-2, N-terminal smi_0379 IPR009000 Translation protein, beta-barrel domain smi_0379 IPR023115 Translation initiation factor IF- 2, domain 3 smi_0379 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0380 IPR000238 Ribosome-binding factor A smi_0380 IPR015946 K homology domain-like, alpha/beta smi_0380 IPR020053 Ribosome-binding factor A, conserved site smi_0380 IPR023799 Ribosome-binding factor A domain smi_0382 IPR015077 Domain of unknown function DUF1858 smi_0383 IPR000014 PAS domain smi_0383 IPR007380 Domain of unknown function DUF438 smi_0383 IPR012312 Haemerythrin/HHE cation-binding motif smi_0384 IPR015026 Protein of unknown function DUF1912 smi_0385 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical smi_0386 IPR002563 Flavin reductase-like, FMN-binding smi_0386 IPR012349 FMN-binding split barrel smi_0387 IPR000182 GNAT domain smi_0387 IPR016181 Acyl-CoA N-acyltransferase smi_0388 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0389 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site smi_0389 IPR002300 Aminoacyl-tRNA synthetase, class Ia smi_0389 IPR002303 Valine-tRNA ligase smi_0389 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain smi_0389 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding smi_0389 IPR010978 tRNA-binding arm smi_0389 IPR013155 Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding smi_0389 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold smi_0389 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm smi_0390 IPR001525 C-5 cytosine methyltransferase smi_0390 IPR018117 DNA methylase, C-5 cytosine-specific, active site smi_0390 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like smi_0390 IPR031303 smi_0390 smi_0391 IPR003594 Histidine kinase-like ATPase, C-terminal domain smi_0393 IPR003812 Fido domain smi_0394 IPR001650 Helicase, C-terminal smi_0394 IPR006935 Helicase/UvrB domain smi_0394 IPR014001 Helicase, superfamily 1/2, ATP-binding domain smi_0394 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0396 IPR001647 DNA-binding HTH domain, TetR-type smi_0396 IPR009057 Homeodomain-like smi_0396 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal smi_0396 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal smi_0396 IPR025996 WHG domain smi_0397 IPR003439 ABC transporter-like smi_0397 IPR003593 AAA+ ATPase domain smi_0397 IPR017871 ABC transporter, conserved site smi_0397 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0398 IPR003838 Permease FtsX-like smi_0398 IPR020846 Major facilitator superfamily domain smi_0399 IPR012337 Ribonuclease H-like domain smi_0399 IPR025246 Transposase IS30-like HTH domain smi_0400 IPR007759 DNA-directed RNA polymerase delta subunit/Asxl smi_0400 IPR029757 Probable DNA-directed RNA polymerase subunit delta smi_0401 IPR004468 CTP synthase smi_0401 IPR017456 CTP synthase, N-terminal smi_0401 IPR017926 Glutamine amidotransferase smi_0401 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0401 IPR029062 Class I glutamine amidotransferase-like smi_0402 IPR018337 Cell wall/choline-binding repeat smi_0403 IPR028105 Protein of unknown function DUF4651 smi_0404 IPR005746 Thioredoxin smi_0404 IPR012336 Thioredoxin-like fold smi_0404 IPR013766 Thioredoxin domain smi_0405 IPR002547 tRNA-binding domain smi_0405 IPR012340 Nucleic acid-binding, OB-fold smi_0405 IPR027855 Domain of unknown function DUF4479 smi_0406 IPR002347 Glucose/ribitol dehydrogenase smi_0406 IPR016040 NAD(P)-binding domain smi_0406 IPR020904 Short-chain dehydrogenase/reductase, conserved site smi_0407 IPR006118 Recombinase, conserved site smi_0407 IPR006119 Resolvase, N-terminal smi_0407 IPR011109 Recombinase smi_0407 IPR025827 Recombinase zinc beta ribbon domain smi_0408 IPR025234 Protein of unknown function DUF4177 smi_0409 IPR001387 Cro/C1-type helix-turn-helix domain smi_0409 IPR010982 Lambda repressor-like, DNA-binding domain smi_0409 IPR015927 Peptidase S24/S26A/S26B/S26C smi_0409 IPR019759 Peptidase S24/S26A/S26B smi_0409 IPR028360 Peptidase S24/S26, beta-ribbon domain smi_0410 IPR001387 Cro/C1-type helix-turn-helix domain smi_0410 IPR010982 Lambda repressor-like, DNA-binding domain smi_0420 IPR008840 Siphovirus Gp157 smi_0421 IPR006505 Streptococcus phage Sfi11, Gp233, NTP-binding smi_0421 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0422 IPR001650 Helicase, C-terminal smi_0422 IPR006935 Helicase/UvrB domain smi_0422 IPR014001 Helicase, superfamily 1/2, ATP-binding domain smi_0422 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0423 IPR007731 Streptococcus phage Sfi11, Gp151 smi_0424 IPR014820 Primase, C-terminal 1 smi_0424 IPR015330 DNA primase/polymerase, bifunctional, N-terminal smi_0425 IPR001257 Parvovirus non-structural protein 1, helicase domain smi_0425 IPR004968 DNA primase/nucleoside triphosphatase, C-terminal smi_0425 IPR006500 DNA primase, phage/plasmid smi_0425 IPR014818 Bacteriophage/plasmid primase, P4, C-terminal smi_0425 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0426 IPR014883 VRR-NUC domain smi_0429 IPR012865 Protein of unknown function DUF1642 smi_0433 IPR010779 Protein of unknown function DUF1372 smi_0437 IPR021739 Protein of unknwon function DUF3310 smi_0438 IPR003477 mRNA interferase PemK-like protein smi_0438 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor smi_0440 IPR006524 Transcription activator, ArpU family smi_0442 IPR005335 Terminase small subunit smi_0443 IPR006437 Bacteriophage terminase, large subunit smi_0444 IPR006428 Portal protein, SPP1-type smi_0444 IPR021145 Portal protein, SPP1 Gp6-like smi_0445 IPR003540 ADP ribosyltransferase smi_0445 IPR006528 Phage head morphogenesis domain smi_0451 IPR009636 Bacteriophage mv4, Gp20 smi_0456 IPR010064 Bacteriophage HK97-gp10, putative tail-component smi_0459 IPR007067 Tail sheath protein smi_0459 IPR020287 Tail sheath protein, C-terminal domain smi_0460 IPR018989 Protein of unknown function DUF2001 smi_0461 IPR014986 Clostridium phage phiCD119, XkdN smi_0462 IPR013491 Caudovirus, tape measure, N-terminal smi_0463 IPR018392 LysM domain smi_0465 IPR022555 Protein of unknown function, DUF2577 smi_0466 IPR020288 Protein of unknown function DUF2634 smi_0467 IPR006949 Baseplate assembly protein J-like, predicted smi_0468 IPR018755 Bacteriophage Mu, Gp48 smi_0477 IPR010026 Phage holin, LL-H family smi_0478 IPR002502 N-acetylmuramoyl-L-alanine amidase domain smi_0478 IPR018337 Cell wall/choline-binding repeat smi_0479 IPR002559 Transposase, IS4-like smi_0479 IPR008490 Transposase InsH, N-terminal smi_0480 IPR000424 Primosome PriB/single-strand DNA-binding smi_0480 IPR011344 Single-stranded DNA-binding protein smi_0480 IPR012340 Nucleic acid-binding, OB-fold smi_0481 IPR011032 GroES (chaperonin 10)-like smi_0481 IPR018369 Chaperonin Cpn10, conserved site smi_0481 IPR020818 Chaperonin Cpn10 smi_0482 IPR001844 Chaperonin Cpn60 smi_0482 IPR002423 Chaperonin Cpn60/TCP-1 smi_0482 IPR018370 Chaperonin Cpn60, conserved site smi_0482 IPR027409 GroEL-like apical domain smi_0482 IPR027413 GroEL-like equatorial domain smi_0483 IPR003828 Protein of unknown function DUF208 smi_0484 IPR013216 Methyltransferase type 11 smi_0484 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like smi_0485 IPR001387 Cro/C1-type helix-turn-helix domain smi_0485 IPR010057 Transcription activator MutR, C-terminal smi_0485 IPR010982 Lambda repressor-like, DNA-binding domain smi_0486 IPR007295 Domain of unknown function DUF402 smi_0486 IPR016882 Uncharacterised protein family UPF0374 smi_0487 IPR003783 Regulatory protein RecX smi_0487 IPR011991 Winged helix-turn-helix DNA-binding domain smi_0488 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD smi_0488 IPR002792 TRAM domain smi_0488 IPR010280 (Uracil-5)-methyltransferase family smi_0488 IPR012340 Nucleic acid-binding, OB-fold smi_0488 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like smi_0488 IPR030390 smi_0488 smi_0488 IPR030391 smi_0488 smi_0511 IPR003142 Biotin protein ligase, C-terminal smi_0511 IPR004143 Biotin/lipoate A/B protein ligase smi_0511 IPR004408 Biotin--acetyl-CoA-carboxylase ligase smi_0511 IPR008988 Transcriptional repressor, C-terminal smi_0511 IPR011991 Winged helix-turn-helix DNA-binding domain smi_0511 IPR013196 Helix-turn-helix, type 11 smi_0511 IPR030855 smi_0511 smi_0512 IPR012337 Ribonuclease H-like domain smi_0512 IPR025246 Transposase IS30-like HTH domain smi_0513 IPR007016 O-antigen ligase-related smi_0514 IPR000835 MarR-type HTH domain smi_0514 IPR011991 Winged helix-turn-helix DNA-binding domain smi_0515 IPR003439 ABC transporter-like smi_0515 IPR003593 AAA+ ATPase domain smi_0515 IPR017871 ABC transporter, conserved site smi_0515 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0516 IPR000515 MetI-like domain smi_0516 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain smi_0517 IPR001647 DNA-binding HTH domain, TetR-type smi_0517 IPR009057 Homeodomain-like smi_0517 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal smi_0518 IPR002524 Cation efflux protein smi_0518 IPR027469 Cation efflux protein transmembrane domain smi_0519 IPR000843 Transcription regulator HTH, LacI smi_0519 IPR010982 Lambda repressor-like, DNA-binding domain smi_0519 IPR028082 Periplasmic binding protein-like I smi_0520 IPR000705 Galactokinase smi_0520 IPR006203 GHMP kinase, ATP-binding, conserved site smi_0520 IPR006204 GHMP kinase N-terminal domain smi_0520 IPR006206 Mevalonate/galactokinase smi_0520 IPR013750 GHMP kinase, C-terminal domain smi_0520 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup smi_0520 IPR019539 Galactokinase galactose-binding domain smi_0520 IPR019741 Galactokinase, conserved site smi_0520 IPR020568 Ribosomal protein S5 domain 2-type fold smi_0520 IPR022963 Galactokinase, bacterial smi_0521 IPR000766 Galactose-1-phosphate uridyl transferase, class II smi_0521 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal smi_0521 IPR005850 Galactose-1-phosphate uridyl transferase, C-terminal smi_0521 IPR023425 Galactose-1-phosphate uridyl transferase, class II, conserved site smi_0522 IPR003736 Phenylacetic acid degradation-related domain smi_0522 IPR006683 Thioesterase superfamily smi_0522 IPR029069 HotDog domain smi_0523 IPR002052 DNA methylase, N-6 adenine-specific, conserved site smi_0523 IPR012263 Adenine modification methylase, M.EcoRV-type smi_0523 IPR012327 D12 class N6 adenine-specific DNA methyltransferase smi_0523 IPR023095 Adenine-specific methyltransferase, domain 2 smi_0523 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like smi_0524 IPR001091 Restriction/modification DNA-methylase smi_0524 IPR002052 DNA methylase, N-6 adenine-specific, conserved site smi_0524 IPR002941 DNA methylase N-4/N-6 smi_0524 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like smi_0526 IPR007637 Restriction endonuclease, type II, DpmII-like smi_0526 IPR021191 Restriction endonuclease, type II, DpmII smi_0527 IPR006042 Xanthine/uracil permease smi_0527 IPR006043 Xanthine/uracil/vitamin C permease smi_0527 IPR017588 Xanthine permease smi_0528 IPR000836 Phosphoribosyltransferase domain smi_0528 IPR010079 Xanthine phosphoribosyltransferase smi_0528 IPR029057 Phosphoribosyltransferase-like smi_0529 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain smi_0529 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase smi_0530 IPR004808 AP endonuclease 1 smi_0530 IPR005135 Endonuclease/exonuclease/phosphatase smi_0530 IPR020847 AP endonuclease 1, binding site smi_0530 IPR020848 AP endonuclease 1, conserved site smi_0531 IPR003675 CAAX amino terminal protease smi_0532 IPR001845 HTH ArsR-type DNA-binding domain smi_0532 IPR011991 Winged helix-turn-helix DNA-binding domain smi_0533 IPR012867 Domain of unknown function DUF1648 smi_0533 IPR025962 SdpI/YhfL protein family smi_0533 IPR026272 Immunity protein SdpI smi_0534 IPR021707 Protein of unknown function DUF3290 smi_0535 IPR007353 Protein of unknown function DUF421 smi_0535 IPR023090 Uncharacterised domain UPF0702, alpha/beta domain smi_0536 IPR003439 ABC transporter-like smi_0536 IPR003593 AAA+ ATPase domain smi_0536 IPR011527 ABC transporter type 1, transmembrane domain smi_0536 IPR017871 ABC transporter, conserved site smi_0536 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0537 IPR003439 ABC transporter-like smi_0537 IPR003593 AAA+ ATPase domain smi_0537 IPR011527 ABC transporter type 1, transmembrane domain smi_0537 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0538 IPR003362 Bacterial sugar transferase smi_0539 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase smi_0539 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 smi_0539 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 smi_0539 IPR015424 Pyridoxal phosphate-dependent transferase smi_0541 IPR005256 Anthranilate synthase component I, PabB-like smi_0541 IPR005801 ADC synthase smi_0541 IPR006805 Anthranilate synthase component I, N-terminal smi_0541 IPR015890 Chorismate binding, C-terminal smi_0541 IPR019999 Anthranilate synthase component I - like smi_0542 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain smi_0542 IPR017926 Glutamine amidotransferase smi_0542 IPR029062 Class I glutamine amidotransferase-like smi_0543 IPR000312 Glycosyl transferase, family 3 smi_0543 IPR005940 Anthranilate phosphoribosyl transferase smi_0543 IPR017459 Glycosyl transferase family 3, N-terminal domain smi_0544 IPR001468 Indole-3-glycerol phosphate synthase, conserved site smi_0544 IPR011060 Ribulose-phosphate binding barrel smi_0544 IPR013785 Aldolase-type TIM barrel smi_0544 IPR013798 Indole-3-glycerol phosphate synthase smi_0545 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) like domain smi_0545 IPR011060 Ribulose-phosphate binding barrel smi_0545 IPR013785 Aldolase-type TIM barrel smi_0546 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme smi_0546 IPR006653 Tryptophan synthase, beta chain, conserved site smi_0546 IPR006654 Tryptophan synthase, beta chain smi_0546 IPR023026 Tryptophan synthase beta chain/beta chain-like smi_0547 IPR002028 Tryptophan synthase, alpha chain smi_0547 IPR011060 Ribulose-phosphate binding barrel smi_0547 IPR013785 Aldolase-type TIM barrel smi_0547 IPR018204 Tryptophan synthase, alpha chain, active site smi_0548 IPR010627 Peptidase A24A, N-terminal smi_0549 IPR000182 GNAT domain smi_0549 IPR016181 Acyl-CoA N-acyltransferase smi_0550 IPR008462 CsbD-like smi_0551 IPR005531 Alkaline shock protein Asp23 smi_0552 IPR018730 Protein of unknown function DUF2273 smi_0554 IPR007341 Transglycosylase-associated protein smi_0555 IPR007737 Mga helix-turn-helix domain smi_0555 IPR011991 Winged helix-turn-helix DNA-binding domain smi_0555 IPR013199 Helix-turn-helix Mga, DNA-binding trans-acting positive regulator smi_0555 IPR013236 M protein trans-acting positive regulator (MGA), PRD domain smi_0557 IPR002085 Alcohol dehydrogenase superfamily, zinc-type smi_0557 IPR011032 GroES (chaperonin 10)-like smi_0557 IPR013154 Alcohol dehydrogenase GroES-like smi_0557 IPR016040 NAD(P)-binding domain smi_0557 IPR020843 Polyketide synthase, enoylreductase smi_0558 IPR000944 Transcription regulator Rrf2-like smi_0558 IPR011991 Winged helix-turn-helix DNA-binding domain smi_0560 IPR003593 AAA+ ATPase domain smi_0560 IPR003959 ATPase, AAA-type, core smi_0560 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal smi_0560 IPR021886 MgsA AAA+ ATPase C-terminal smi_0560 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0560 IPR032423 smi_0560 smi_0561 IPR021380 Protein of unknown function DUF3013 smi_0562 IPR000086 NUDIX hydrolase domain smi_0562 IPR015797 NUDIX hydrolase domain-like smi_0562 IPR020084 NUDIX hydrolase, conserved site smi_0563 IPR004498 Ribosomal protein L11 methyltransferase smi_0563 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like smi_0564 IPR006700 Ribosomal RNA small subunit methyltransferase E smi_0564 IPR015947 PUA-like domain smi_0564 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal smi_0564 IPR029028 Alpha/beta knot methyltransferases smi_0565 IPR001567 Peptidase M3A/M3B smi_0565 IPR004438 Peptidase M3B, oligoendopeptidase F smi_0565 IPR013647 Oligopeptidase F, N-terminal domain smi_0565 IPR024079 Metallopeptidase, catalytic domain smi_0566 IPR021247 Protein of unknown function DUF2785 smi_0567 IPR002347 Glucose/ribitol dehydrogenase smi_0567 IPR014007 Acetoin reductase smi_0567 IPR016040 NAD(P)-binding domain smi_0567 IPR020904 Short-chain dehydrogenase/reductase, conserved site smi_0568 IPR000425 Major intrinsic protein smi_0568 IPR022357 Major intrinsic protein, conserved site smi_0568 IPR023271 Aquaporin-like smi_0569 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 smi_0569 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF smi_0570 IPR007197 Radical SAM smi_0570 IPR013785 Aldolase-type TIM barrel smi_0570 IPR017742 7-carboxy-7-deazaguanine synthase smi_0570 IPR024924 7-carboxy-7-deazaguanine synthase-like smi_0571 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein smi_0572 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold smi_0572 IPR018317 Queuosine biosynthesis protein QueC smi_0573 IPR005746 Thioredoxin smi_0573 IPR012336 Thioredoxin-like fold smi_0573 IPR013766 Thioredoxin domain smi_0573 IPR017937 Thioredoxin, conserved site smi_0574 IPR027879 Protein of unknown function DUF4649 smi_0575 IPR000835 MarR-type HTH domain smi_0575 IPR011991 Winged helix-turn-helix DNA-binding domain smi_0576 IPR005538 LrgA/CidA family smi_0577 IPR007300 CidB/LrgB family smi_0578 IPR003439 ABC transporter-like smi_0578 IPR003593 AAA+ ATPase domain smi_0578 IPR011527 ABC transporter type 1, transmembrane domain smi_0578 IPR017871 ABC transporter, conserved site smi_0578 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0580 IPR003439 ABC transporter-like smi_0580 IPR003593 AAA+ ATPase domain smi_0580 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0581 IPR000524 Transcription regulator HTH, GntR smi_0581 IPR011991 Winged helix-turn-helix DNA-binding domain smi_0582 IPR003796 Ribonucleotide reductase regulator NrdR-like smi_0582 IPR005144 ATP-cone smi_0583 IPR006343 Replication protein, DnaD/DnaB domain smi_0584 IPR002611 IstB-like ATP-binding protein smi_0584 IPR009928 Primosomal DnaI, N-terminal smi_0584 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0585 IPR000415 Nitroreductase-like smi_0585 IPR016446 Flavin oxidoreductase Frp family smi_0585 IPR029479 Nitroreductase smi_0586 IPR005225 Small GTP-binding protein domain smi_0586 IPR006073 GTP binding domain smi_0586 IPR015946 K homology domain-like, alpha/beta smi_0586 IPR016484 GTP-binding protein EngA smi_0586 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0586 IPR032859 smi_0586 smi_0589 IPR000185 Protein translocase subunit SecA smi_0589 IPR004027 SEC-C motif smi_0589 IPR011115 SecA DEAD-like, N-terminal smi_0589 IPR011116 SecA Wing/Scaffold smi_0589 IPR011130 SecA preprotein, cross-linking domain smi_0589 IPR020937 SecA conserved site smi_0589 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0590 IPR006218 DAHP synthetase I/KDSA smi_0590 IPR006219 DHAP synthase, class 1 smi_0590 IPR013785 Aldolase-type TIM barrel smi_0591 IPR006218 DAHP synthetase I/KDSA smi_0591 IPR006219 DHAP synthase, class 1 smi_0591 IPR013785 Aldolase-type TIM barrel smi_0592 IPR002582 Holo-[acyl carrier protein] synthase smi_0592 IPR004568 Phosphopantethiene-protein transferase domain smi_0592 IPR008278 4'-phosphopantetheinyl transferase superfamily smi_0593 IPR000821 Alanine racemase smi_0593 IPR001608 Alanine racemase, N-terminal smi_0593 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal smi_0593 IPR011079 Alanine racemase, C-terminal smi_0593 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site smi_0593 IPR029066 PLP-binding barrel smi_0594 IPR001650 Helicase, C-terminal smi_0594 IPR004609 ATP-dependent DNA helicase RecG smi_0594 IPR011545 DEAD/DEAH box helicase domain smi_0594 IPR012340 Nucleic acid-binding, OB-fold smi_0594 IPR014001 Helicase, superfamily 1/2, ATP-binding domain smi_0594 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0594 IPR033454 smi_0594 smi_0596 IPR003346 Transposase, IS116/IS110/IS902 smi_0597 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal smi_0598 IPR010106 Conserved hypothetical protein CHP01784 smi_0599 IPR000182 GNAT domain smi_0599 IPR016181 Acyl-CoA N-acyltransferase smi_0600 IPR008391 Acetyl xylan esterase smi_0600 IPR029058 Alpha/Beta hydrolase fold smi_0601 IPR001254 Peptidase S1 smi_0601 IPR004124 Glycoside hydrolase, family 33, N-terminal smi_0601 IPR008256 Peptidase S1B smi_0601 IPR009003 Trypsin-like cysteine/serine peptidase domain smi_0601 IPR011040 Sialidases smi_0601 IPR013320 Concanavalin A-like lectin/glucanase, subgroup smi_0601 IPR019931 LPXTG cell wall anchor domain smi_0601 IPR026856 Sialidase family smi_0602 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase smi_0602 IPR011060 Ribulose-phosphate binding barrel smi_0602 IPR013785 Aldolase-type TIM barrel smi_0603 IPR006059 Bacterial extracellular solute-binding, family 1 smi_0604 IPR000515 MetI-like domain smi_0605 IPR000515 MetI-like domain smi_0606 IPR004375 Conserved hypothetical protein CHP00022 smi_0607 IPR006938 Protein of unknown function DUF624 smi_0608 IPR002220 DapA-like smi_0608 IPR013785 Aldolase-type TIM barrel smi_0609 IPR000600 ROK smi_0611 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family smi_0612 IPR000281 Helix-turn-helix protein RpiR smi_0612 IPR001347 Sugar isomerase (SIS) smi_0612 IPR009057 Homeodomain-like smi_0612 IPR011991 Winged helix-turn-helix DNA-binding domain smi_0613 IPR001460 Penicillin-binding protein, transpeptidase smi_0613 IPR005311 Penicillin-binding protein, dimerisation domain smi_0613 IPR012338 Beta-lactamase/transpeptidase-like smi_0614 IPR000093 DNA recombination protein RecR smi_0614 IPR006171 Toprim domain smi_0614 IPR015967 Recombination protein RecR, conserved site smi_0614 IPR023627 Recombination protein RecR smi_0614 IPR023628 Recombination protein RecR, C4-type zinc finger smi_0615 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site smi_0615 IPR005905 D-alanine--D-alanine ligase smi_0615 IPR011095 D-alanine--D-alanine ligase, C-terminal smi_0615 IPR011127 D-alanine--D-alanine ligase, N-terminal domain smi_0615 IPR013815 ATP-grasp fold, subdomain 1 smi_0615 IPR013816 ATP-grasp fold, subdomain 2 smi_0615 IPR016185 Pre-ATP-grasp domain smi_0616 IPR000713 Mur ligase, N-terminal smi_0616 IPR004101 Mur ligase, C-terminal smi_0616 IPR005863 UDP-MurNAc-pentapeptide synthetase smi_0616 IPR013221 Mur ligase, central smi_0617 IPR011737 Conserved hypothetical protein CHP02206, TP0381 smi_0618 IPR012337 Ribonuclease H-like domain smi_0618 IPR025246 Transposase IS30-like HTH domain smi_0619 IPR012337 Ribonuclease H-like domain smi_0619 IPR025246 Transposase IS30-like HTH domain smi_0620 IPR003494 SHS2 domain inserted in FtsA smi_0620 IPR020823 Cell division protein FtsA smi_0620 IPR021873 Cell division protein FtsA, C-terminal, Firmicutes smi_0621 IPR000158 Cell division protein FtsZ smi_0621 IPR003008 Tubulin/FtsZ, GTPase domain smi_0621 IPR008280 Tubulin/FtsZ, C-terminal smi_0621 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain smi_0621 IPR020805 Cell division protein FtsZ, conserved site smi_0621 IPR024757 Cell division protein FtsZ, C-terminal smi_0622 IPR001608 Alanine racemase, N-terminal smi_0622 IPR011078 Uncharacterised protein family UPF0001 smi_0622 IPR029066 PLP-binding barrel smi_0623 IPR007561 Cell division protein SepF/SepF-related smi_0623 IPR023052 Cell division protein SepF smi_0624 IPR003425 Uncharacterised protein family Ycf19 smi_0625 IPR002942 RNA-binding S4 domain smi_0626 IPR007793 DivIVA family smi_0626 IPR019933 DivIVA domain smi_0627 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site smi_0627 IPR002300 Aminoacyl-tRNA synthetase, class Ia smi_0627 IPR002301 Isoleucine-tRNA ligase smi_0627 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain smi_0627 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding smi_0627 IPR010663 Zinc finger, DNA glycosylase/AP lyase/isoleucyl tRNA synthetase smi_0627 IPR013155 Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding smi_0627 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold smi_0627 IPR023585 Isoleucine-tRNA ligase, type 1 smi_0629 IPR005952 Phosphoglycerate mutase 1 smi_0629 IPR013078 Histidine phosphatase superfamily, clade-1 smi_0629 IPR029033 Histidine phosphatase superfamily smi_0630 IPR008928 Six-hairpin glycosidase-like smi_0630 IPR016518 Alpha-L-fucosidase smi_0630 IPR027414 Glycosyl hydrolase family, N-terminal domain smi_0631 IPR003439 ABC transporter-like smi_0631 IPR003593 AAA+ ATPase domain smi_0631 IPR017871 ABC transporter, conserved site smi_0631 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0632 IPR003838 Permease FtsX-like smi_0632 IPR025857 MacB-like periplasmic core domain smi_0633 IPR002065 Putative thiol peroxidase Tpx smi_0633 IPR012336 Thioredoxin-like fold smi_0633 IPR013740 Redoxin smi_0633 IPR018219 Thiol peroxidase conserved site smi_0634 IPR006127 Periplasmic solute binding protein family smi_0634 IPR006128 Adhesion lipoprotein smi_0634 IPR006129 Adhesin B smi_0635 IPR001626 ABC-3 smi_0635 IPR029022 ABC transporter, BtuC-like smi_0636 IPR003439 ABC transporter-like smi_0636 IPR003593 AAA+ ATPase domain smi_0636 IPR017871 ABC transporter, conserved site smi_0636 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0637 IPR010290 Transmembrane secretion effector smi_0637 IPR020846 Major facilitator superfamily domain smi_0638 IPR000594 UBA/THIF-type NAD/FAD binding fold smi_0638 IPR016040 NAD(P)-binding domain smi_0639 IPR000718 Peptidase M13 smi_0639 IPR008753 Peptidase M13, N-terminal domain smi_0639 IPR018497 Peptidase M13, C-terminal domain smi_0639 IPR024079 Metallopeptidase, catalytic domain smi_0640 IPR001279 Beta-lactamase-like smi_0641 IPR013783 Immunoglobulin-like fold smi_0642 IPR002912 ACT domain smi_0642 IPR003607 HD/PDEase domain smi_0642 IPR004095 TGS smi_0642 IPR004811 RelA/SpoT family smi_0642 IPR007685 RelA/SpoT smi_0642 IPR012675 Beta-grasp domain smi_0642 IPR012676 TGS-like smi_0643 IPR003732 D-tyrosyl-tRNA(Tyr) deacylase smi_0643 IPR023509 D-Tyr tRNAtyr deacylase-like domain smi_0645 IPR001367 Iron dependent repressor-like, metal binding and dimerisation domain smi_0645 IPR007167 Ferrous iron transporter FeoA domain smi_0645 IPR011991 Winged helix-turn-helix DNA-binding domain smi_0645 IPR022687 Iron dependent repressor, N-terminal smi_0645 IPR022689 Iron dependent repressor, diptheria toxin type smi_0646 IPR000979 Phosphodiesterase MJ0936/Vps29 smi_0646 IPR011152 Phosphoesterase MJ0912 smi_0646 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type smi_0646 IPR029052 Metallo-dependent phosphatase-like smi_0647 IPR000944 Transcription regulator Rrf2-like smi_0647 IPR011991 Winged helix-turn-helix DNA-binding domain smi_0648 IPR024499 Protein of unknown function DUF2974 smi_0648 IPR029058 Alpha/Beta hydrolase fold smi_0649 IPR001789 Signal transduction response regulator, receiver domain smi_0649 IPR001867 Signal transduction response regulator, C-terminal smi_0649 IPR011006 CheY-like superfamily smi_0649 IPR011991 Winged helix-turn-helix DNA-binding domain smi_0649 IPR016032 Signal transduction response regulator, C-terminal effector smi_0650 IPR003594 Histidine kinase-like ATPase, C-terminal domain smi_0650 IPR004358 Signal transduction histidine kinase-related protein, C-terminal smi_0651 IPR003439 ABC transporter-like smi_0651 IPR003593 AAA+ ATPase domain smi_0651 IPR011527 ABC transporter type 1, transmembrane domain smi_0651 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0652 IPR005240 Protein of unknown function DUF389 smi_0653 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain smi_0653 IPR002320 Threonine-tRNA ligase, class IIa smi_0653 IPR004095 TGS smi_0653 IPR004154 Anticodon-binding smi_0653 IPR012675 Beta-grasp domain smi_0653 IPR012676 TGS-like smi_0653 IPR012947 Threonyl/alanyl tRNA synthetase, SAD smi_0653 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain smi_0656 IPR000589 Ribosomal protein S15 smi_0656 IPR005290 Ribosomal protein S15, bacterial-type smi_0656 IPR009068 S15/NS1, RNA-binding smi_0657 IPR000522 ABC transporter, permease protein smi_0657 IPR029022 ABC transporter, BtuC-like smi_0658 IPR003439 ABC transporter-like smi_0658 IPR003593 AAA+ ATPase domain smi_0658 IPR017871 ABC transporter, conserved site smi_0658 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0659 IPR002491 ABC transporter periplasmic binding domain smi_0660 IPR000801 Putative esterase smi_0660 IPR029058 Alpha/Beta hydrolase fold smi_0661 IPR002123 Phospholipid/glycerol acyltransferase smi_0662 IPR012337 Ribonuclease H-like domain smi_0662 IPR025246 Transposase IS30-like HTH domain smi_0663 IPR001757 Cation-transporting P-type ATPase smi_0663 IPR008250 P-type ATPase, A domain smi_0663 IPR018303 P-type ATPase, phosphorylation site smi_0663 IPR023214 HAD-like domain smi_0663 IPR023298 P-type ATPase, transmembrane domain smi_0663 IPR023299 P-type ATPase, cytoplasmic domain N smi_0664 IPR006901 tRNA methyltransferase TrmK smi_0664 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like smi_0665 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 smi_0666 IPR006076 FAD dependent oxidoreductase smi_0666 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain smi_0667 IPR006076 FAD dependent oxidoreductase smi_0667 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain smi_0668 IPR005886 UDP-glucose 4-epimerase GalE smi_0668 IPR008089 Nucleotide sugar epimerase smi_0668 IPR016040 NAD(P)-binding domain smi_0669 IPR001173 Glycosyltransferase 2-like smi_0669 IPR029044 Nucleotide-diphospho-sugar transferases smi_0672 IPR003136 Cytidylate kinase smi_0672 IPR011994 Cytidylate kinase domain smi_0672 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0673 IPR004624 PhnA protein smi_0673 IPR013987 PhnA protein, N-terminal smi_0673 IPR013988 PhnA protein, C-terminal smi_0675 IPR011701 Major facilitator superfamily smi_0675 IPR020846 Major facilitator superfamily domain smi_0676 IPR001406 Pseudouridine synthase I, TruA smi_0676 IPR020094 Pseudouridine synthase I, TruA, N-terminal smi_0676 IPR020095 Pseudouridine synthase I, TruA, C-terminal smi_0676 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain smi_0676 IPR020103 Pseudouridine synthase, catalytic domain smi_0677 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase smi_0677 IPR029056 Ribokinase-like smi_0678 IPR009825 ECF transporter, substrate-specific component-like smi_0679 IPR000587 Creatinase, N-terminal smi_0679 IPR000994 Peptidase M24, structural domain smi_0679 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site smi_0679 IPR001714 Peptidase M24, methionine aminopeptidase smi_0679 IPR028980 Creatinase/Aminopeptidase P, N-terminal smi_0679 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal smi_0680 IPR011698 CobB/CobQ-like glutamine amidotransferase smi_0680 IPR029062 Class I glutamine amidotransferase-like smi_0681 IPR013221 Mur ligase, central smi_0681 IPR013564 Domain of unknown function DUF1727 smi_0682 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain smi_0682 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site smi_0682 IPR016156 FAD/NAD-linked reductase, dimerisation domain smi_0682 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain smi_0683 IPR001905 Ammonium transporter smi_0683 IPR002229 Blood group Rhesus C/E/D polypeptide smi_0683 IPR018047 Ammonium transporter, conserved site smi_0683 IPR024041 Ammonium transporter AmtB-like domain smi_0683 IPR029020 Ammonium/urea transporter smi_0684 IPR002187 Nitrogen regulatory protein PII smi_0684 IPR011322 Nitrogen regulatory PII-like, alpha/beta smi_0684 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal smi_0684 IPR017918 Nitrogen regulatory protein PII, conserved site smi_0685 IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site smi_0685 IPR001650 Helicase, C-terminal smi_0685 IPR011545 DEAD/DEAH box helicase domain smi_0685 IPR014001 Helicase, superfamily 1/2, ATP-binding domain smi_0685 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0685 IPR030880 smi_0685 smi_0686 IPR012337 Ribonuclease H-like domain smi_0686 IPR025246 Transposase IS30-like HTH domain smi_0687 IPR010312 GTP-sensing transcriptional pleiotropic repressor CodY, N-terminal smi_0687 IPR011991 Winged helix-turn-helix DNA-binding domain smi_0687 IPR013198 GTP-sensing helix-turn-helix, CodY, C-terminal smi_0687 IPR014154 GTP-sensing transcriptional pleiotropic repressor CodY smi_0688 IPR000868 Isochorismatase-like smi_0690 IPR003838 Permease FtsX-like smi_0691 IPR003439 ABC transporter-like smi_0691 IPR003593 AAA+ ATPase domain smi_0691 IPR017871 ABC transporter, conserved site smi_0691 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0692 IPR003838 Permease FtsX-like smi_0693 IPR001789 Signal transduction response regulator, receiver domain smi_0693 IPR001867 Signal transduction response regulator, C-terminal smi_0693 IPR011006 CheY-like superfamily smi_0693 IPR011991 Winged helix-turn-helix DNA-binding domain smi_0694 IPR003594 Histidine kinase-like ATPase, C-terminal domain smi_0694 IPR003660 HAMP linker domain smi_0694 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain smi_0695 IPR000771 Ketose-bisphosphate aldolase, class-II smi_0695 IPR011289 Fructose-1,6-bisphosphate aldolase, class 2 smi_0695 IPR013785 Aldolase-type TIM barrel smi_0697 IPR007337 RelB antitoxin/Antitoxin DinJ smi_0698 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family smi_0699 IPR000073 Alpha/beta hydrolase fold-1 smi_0699 IPR029058 Alpha/Beta hydrolase fold smi_0700 IPR013078 Histidine phosphatase superfamily, clade-1 smi_0700 IPR029033 Histidine phosphatase superfamily smi_0701 IPR003439 ABC transporter-like smi_0701 IPR003593 AAA+ ATPase domain smi_0701 IPR017871 ABC transporter, conserved site smi_0701 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0702 IPR010390 Protein of unknown function DUF990 smi_0703 IPR010390 Protein of unknown function DUF990 smi_0705 IPR000209 Peptidase S8/S53 domain smi_0705 IPR003137 Protease-associated domain, PA smi_0705 IPR010435 Peptidase S8A, DUF1034 C-terminal smi_0705 IPR015500 Peptidase S8, subtilisin-related smi_0705 IPR019931 LPXTG cell wall anchor domain smi_0705 IPR022398 Peptidase S8, subtilisin, His-active site smi_0705 IPR023828 Peptidase S8, subtilisin, Ser-active site smi_0707 IPR024515 Protein of unknown function DUF3397 smi_0708 IPR005911 Conserved hypothetical protein CHP01212 smi_0708 IPR006638 Elongator protein 3/MiaB/NifB smi_0708 IPR007197 Radical SAM smi_0708 IPR023404 Radical SAM, alpha/beta horseshoe smi_0708 IPR032432 smi_0708 smi_0709 IPR010719 Putative rRNA methylase smi_0709 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like smi_0711 IPR006153 Cation/H+ exchanger smi_0711 IPR018422 Cation/H+ exchanger, CPA1 family smi_0712 IPR017039 Virulence factor BrkB smi_0713 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA smi_0714 IPR004547 Glucosamine-6-phosphate isomerase smi_0714 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase smi_0714 IPR018321 Glucosamine-6-phosphate isomerase, conserved site smi_0715 IPR001911 Ribosomal protein S21 smi_0715 IPR018278 Ribosomal protein S21, conserved site smi_0716 IPR003755 HPr(Ser) kinase/phosphorylase smi_0716 IPR011104 HPr kinase/phosphorylase, C-terminal smi_0716 IPR011126 HPr(Ser) kinase/phosphorylase, N-terminal smi_0716 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0716 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain like smi_0717 IPR001640 Prolipoprotein diacylglyceryl transferase smi_0718 IPR009293 Uncharacterised protein family UPF0478 smi_0719 IPR024623 Uncharacterised protein family YtxH smi_0720 IPR004559 Coproporphyrinogen III oxidase, oxygen-independent related smi_0720 IPR006638 Elongator protein 3/MiaB/NifB smi_0720 IPR007197 Radical SAM smi_0720 IPR010723 HemN, C-terminal domain smi_0720 IPR023404 Radical SAM, alpha/beta horseshoe smi_0721 IPR002864 Acyl-ACP thioesterase smi_0721 IPR029069 HotDog domain smi_0722 IPR006354 HAD-superfamily hydrolase, subfamily IIA, hypothetical 1 smi_0722 IPR006357 HAD-superfamily hydrolase, subfamily IIA smi_0722 IPR023214 HAD-like domain smi_0722 IPR023215 Nitrophenylphosphatase-like domain smi_0723 IPR010178 Integral membrane protein 1906 smi_0724 IPR001387 Cro/C1-type helix-turn-helix domain smi_0724 IPR010982 Lambda repressor-like, DNA-binding domain smi_0728 IPR006504 Transcriptional regulator Spx/MgsR smi_0728 IPR006660 Arsenate reductase-like smi_0728 IPR012336 Thioredoxin-like fold smi_0728 IPR023731 Regulatory protein Spx smi_0729 IPR007920 Protein of unknown function UPF0223 smi_0729 IPR023324 BH2638-like domain smi_0730 IPR000760 Inositol monophosphatase smi_0731 IPR001678 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p smi_0731 IPR023267 RNA (C5-cytosine) methyltransferase smi_0731 IPR027391 rRNA small subunit methyltransferase F, C-terminal domain smi_0731 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like smi_0731 IPR031340 smi_0731 smi_0731 IPR031341 smi_0731 smi_0732 IPR011862 Phosphate binding protein smi_0732 IPR024370 PBP domain smi_0733 IPR000515 MetI-like domain smi_0733 IPR011864 Phosphate ABC transporter, permease protein PstC smi_0734 IPR000515 MetI-like domain smi_0734 IPR005672 Phosphate transport system permease protein PstA smi_0735 IPR003439 ABC transporter-like smi_0735 IPR003593 AAA+ ATPase domain smi_0735 IPR005670 Phosphate transport system permease protein 1 smi_0735 IPR017871 ABC transporter, conserved site smi_0735 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0736 IPR003439 ABC transporter-like smi_0736 IPR003593 AAA+ ATPase domain smi_0736 IPR005670 Phosphate transport system permease protein 1 smi_0736 IPR017871 ABC transporter, conserved site smi_0736 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0737 IPR026022 PhoU domain smi_0737 IPR028366 Phosphate transport system protein PhoU smi_0738 IPR001320 Ionotropic glutamate receptor smi_0738 IPR001638 Extracellular solute-binding protein, family 3 smi_0739 IPR000524 Transcription regulator HTH, GntR smi_0739 IPR004839 Aminotransferase, class I/classII smi_0739 IPR011991 Winged helix-turn-helix DNA-binding domain smi_0739 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 smi_0739 IPR015424 Pyridoxal phosphate-dependent transferase smi_0740 IPR005128 Alpha-acetolactate decarboxylase smi_0741 IPR011397 Uncharacterised conserved protein UCP033101 smi_0742 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase smi_0742 IPR006094 FAD linked oxidase, N-terminal smi_0742 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal smi_0742 IPR016166 FAD-binding, type 2 smi_0742 IPR016167 FAD-binding, type 2, subdomain 1 smi_0742 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 smi_0743 IPR003439 ABC transporter-like smi_0743 IPR003593 AAA+ ATPase domain smi_0743 IPR008995 Molybdate/tungstate binding, C-terminal smi_0743 IPR013611 Transport-associated OB, type 2 smi_0743 IPR017871 ABC transporter, conserved site smi_0743 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0744 IPR000515 MetI-like domain smi_0745 IPR000515 MetI-like domain smi_0746 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein smi_0747 IPR012337 Ribonuclease H-like domain smi_0747 IPR025246 Transposase IS30-like HTH domain smi_0748 IPR007612 LURP1-like domain smi_0748 IPR025659 Tubby C-terminal-like domain smi_0749 IPR002318 Alanine-tRNA ligase, class IIc smi_0749 IPR003156 DHHA1 domain smi_0749 IPR009000 Translation protein, beta-barrel domain smi_0749 IPR012947 Threonyl/alanyl tRNA synthetase, SAD smi_0749 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain smi_0749 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain smi_0749 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal smi_0749 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria smi_0750 IPR006046 Alpha amylase smi_0750 IPR006047 Glycosyl hydrolase, family 13, catalytic domain smi_0750 IPR013776 Alpha-amylase, thermostable smi_0750 IPR013780 Glycosyl hydrolase, family 13, all-beta smi_0750 IPR013781 Glycoside hydrolase, catalytic domain smi_0750 IPR015237 Alpha-amylase C-terminal, prokaryotic smi_0750 IPR015902 Glycoside hydrolase, family 13 smi_0750 IPR017853 Glycoside hydrolase, superfamily smi_0751 IPR003439 ABC transporter-like smi_0751 IPR003593 AAA+ ATPase domain smi_0751 IPR017871 ABC transporter, conserved site smi_0751 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0753 IPR000917 Sulfatase smi_0753 IPR012160 Membrane sulfatase, HI1246-related smi_0753 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha smi_0753 IPR017850 Alkaline-phosphatase-like, core domain smi_0754 IPR015947 PUA-like domain smi_0754 IPR019614 S-adenosylmethionine-dependent methyltransferase smi_0754 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like smi_0755 IPR001381 Dehydroquinase class I smi_0755 IPR013785 Aldolase-type TIM barrel smi_0756 IPR011342 Shikimate dehydrogenase smi_0756 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal smi_0756 IPR016040 NAD(P)-binding domain smi_0756 IPR022893 Shikimate, quinate/shikimate dehydrogenase smi_0757 IPR016037 3-dehydroquinate synthase AroB smi_0757 IPR030960 smi_0757 smi_0757 IPR030963 smi_0757 smi_0758 IPR000453 Chorismate synthase smi_0758 IPR020541 Chorismate synthase, conserved site smi_0759 IPR003099 Prephenate dehydrogenase smi_0759 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like smi_0759 IPR016040 NAD(P)-binding domain smi_0760 IPR010368 Protein of unknown function DUF964 smi_0760 IPR023378 YheA/YmcA-like domain smi_0762 IPR007621 TPM domain smi_0763 IPR001986 Enolpyruvate transferase domain smi_0763 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase smi_0763 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta smi_0763 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site smi_0764 IPR000623 Shikimate kinase/Threonine synthase-like 1 smi_0764 IPR023000 Shikimate kinase, conserved site smi_0764 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0764 IPR031322 smi_0764 smi_0765 IPR001086 Prephenate dehydratase smi_0765 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase smi_0765 IPR018528 Prephenate dehydratase, conserved site smi_0766 IPR004474 Cell envelope-related transcriptional attenuator domain smi_0767 IPR007074 LicD smi_0768 IPR001296 Glycosyl transferase, family 1 smi_0768 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain smi_0769 IPR001173 Glycosyltransferase 2-like smi_0769 IPR029044 Nucleotide-diphospho-sugar transferases smi_0770 IPR029468 O-antigen polysaccharide polymerase Wzy smi_0772 IPR008681 Negative regulator of genetic competence, MecA smi_0773 IPR001342 Homoserine dehydrogenase, catalytic smi_0773 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding smi_0773 IPR016040 NAD(P)-binding domain smi_0773 IPR016204 Homoserine dehydrogenase smi_0773 IPR019811 Homoserine dehydrogenase, conserved site smi_0774 IPR000870 Homoserine kinase smi_0774 IPR006203 GHMP kinase, ATP-binding, conserved site smi_0774 IPR006204 GHMP kinase N-terminal domain smi_0774 IPR013750 GHMP kinase, C-terminal domain smi_0774 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup smi_0774 IPR020568 Ribosomal protein S5 domain 2-type fold smi_0775 IPR002569 Peptide methionine sulphoxide reductase MsrA smi_0775 IPR002579 Peptide methionine sulphoxide reductase MrsB smi_0775 IPR011057 Mss4-like smi_0775 IPR028427 Peptide methionine sulfoxide reductase smi_0776 IPR003439 ABC transporter-like smi_0776 IPR003593 AAA+ ATPase domain smi_0776 IPR011527 ABC transporter type 1, transmembrane domain smi_0776 IPR017871 ABC transporter, conserved site smi_0776 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0777 IPR003439 ABC transporter-like smi_0777 IPR003593 AAA+ ATPase domain smi_0777 IPR011527 ABC transporter type 1, transmembrane domain smi_0777 IPR017871 ABC transporter, conserved site smi_0777 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0778 IPR006680 Amidohydrolase 1 smi_0778 IPR011059 Metal-dependent hydrolase, composite domain smi_0778 IPR032466 smi_0778 smi_0779 IPR012337 Ribonuclease H-like domain smi_0779 IPR025246 Transposase IS30-like HTH domain smi_0780 IPR012337 Ribonuclease H-like domain smi_0780 IPR025246 Transposase IS30-like HTH domain smi_0781 IPR012337 Ribonuclease H-like domain smi_0781 IPR025246 Transposase IS30-like HTH domain smi_0782 IPR012337 Ribonuclease H-like domain smi_0782 IPR025246 Transposase IS30-like HTH domain smi_0783 IPR001790 Ribosomal protein L10/acidic P0 smi_0783 IPR002363 Ribosomal protein L10, eubacterial, conserved site smi_0783 IPR022973 Ribosomal protein L10 smi_0784 IPR000206 Ribosomal protein L7/L12 smi_0784 IPR008932 Ribosomal protein L7/L12, oligomerisation smi_0784 IPR013823 Ribosomal protein L7/L12, C-terminal smi_0784 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like smi_0786 IPR010724 Replication initiator A, N-terminal smi_0787 IPR001525 C-5 cytosine methyltransferase smi_0787 IPR018117 DNA methylase, C-5 cytosine-specific, active site smi_0787 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like smi_0787 IPR031303 smi_0787 smi_0789 IPR012336 Thioredoxin-like fold smi_0791 IPR003675 CAAX amino terminal protease smi_0792 IPR000281 Helix-turn-helix protein RpiR smi_0792 IPR001347 Sugar isomerase (SIS) smi_0792 IPR009057 Homeodomain-like smi_0792 IPR011991 Winged helix-turn-helix DNA-binding domain smi_0793 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase smi_0793 IPR011060 Ribulose-phosphate binding barrel smi_0793 IPR013785 Aldolase-type TIM barrel smi_0794 IPR002220 DapA-like smi_0794 IPR013785 Aldolase-type TIM barrel smi_0795 IPR001734 Sodium/solute symporter smi_0795 IPR018212 Sodium/solute symporter, conserved site smi_0796 IPR004375 Conserved hypothetical protein CHP00022 smi_0797 IPR000683 Oxidoreductase, N-terminal smi_0797 IPR004104 Oxidoreductase, C-terminal smi_0797 IPR016040 NAD(P)-binding domain smi_0798 IPR000600 ROK smi_0800 IPR002490 V-type ATPase, V0 complex, 116kDa subunit family smi_0801 IPR000245 V-ATPase proteolipid subunit smi_0801 IPR002379 V-ATPase proteolipid subunit C-like domain smi_0803 IPR002843 ATPase, V0 complex, c/d subunit smi_0804 IPR008218 ATPase, V1 complex, subunit F smi_0805 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain smi_0805 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal smi_0805 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain smi_0805 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site smi_0805 IPR022878 V-type ATP synthase catalytic alpha chain smi_0805 IPR024034 ATPase, F1 complex beta subunit/V1 complex, C-terminal smi_0805 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0805 IPR031686 smi_0805 smi_0806 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain smi_0806 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal smi_0806 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain smi_0806 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site smi_0806 IPR022879 V-type ATP synthase regulatory subunit B/beta smi_0806 IPR024034 ATPase, F1 complex beta subunit/V1 complex, C-terminal smi_0806 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0807 IPR002699 ATPase, V1 complex, subunit D smi_0809 IPR002686 Transposase IS200-like smi_0810 IPR005877 YSIRK Gram-positive signal peptide smi_0810 IPR011439 Domain of unknown function DUF1542 smi_0810 IPR019931 LPXTG cell wall anchor domain smi_0811 IPR002686 Transposase IS200-like smi_0813 IPR002686 Transposase IS200-like smi_0814 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase smi_0814 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal smi_0814 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain smi_0814 IPR014362 Glutamate dehydrogenase smi_0814 IPR016040 NAD(P)-binding domain smi_0815 IPR001295 Dihydroorotate dehydrogenase, conserved site smi_0815 IPR005720 Dihydroorotate dehydrogenase domain smi_0815 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 smi_0815 IPR013785 Aldolase-type TIM barrel smi_0815 IPR024920 Dihydroorotate dehydrogenase, class 1 smi_0816 IPR005790 DNA polymerase III, delta subunit smi_0816 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal smi_0816 IPR010372 DNA polymerase III, delta smi_0817 IPR001189 Manganese/iron superoxide dismutase smi_0817 IPR019831 Manganese/iron superoxide dismutase, N-terminal smi_0817 IPR019832 Manganese/iron superoxide dismutase, C-terminal smi_0817 IPR019833 Manganese/iron superoxide dismutase, binding site smi_0818 IPR009370 Protein of unknown function DUF1027 smi_0819 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr smi_0819 IPR007197 Radical SAM smi_0819 IPR013785 Aldolase-type TIM barrel smi_0819 IPR027492 Dual-specificity RNA methyltransferase RlmN smi_0820 IPR006976 VanZ-like smi_0821 IPR003439 ABC transporter-like smi_0821 IPR003593 AAA+ ATPase domain smi_0821 IPR017871 ABC transporter, conserved site smi_0821 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0821 IPR032781 smi_0821 smi_0822 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain smi_0822 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase smi_0822 IPR029000 Cyclophilin-like domain smi_0823.1 IPR001387 Cro/C1-type helix-turn-helix domain smi_0823.1 IPR010982 Lambda repressor-like, DNA-binding domain smi_0825 IPR000307 Ribosomal protein S16 smi_0825 IPR023803 Ribosomal protein S16 domain smi_0826 IPR020627 Uncharacterised protein family UPF0109 smi_0827 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core smi_0828 IPR029058 Alpha/Beta hydrolase fold smi_0829 IPR002676 RimM protein smi_0829 IPR009000 Translation protein, beta-barrel domain smi_0829 IPR011033 PRC-barrel-like smi_0829 IPR011961 16S rRNA processing protein RimM smi_0829 IPR027275 PRC-barrel domain smi_0830 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria smi_0830 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain smi_0830 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal smi_0830 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal smi_0830 IPR029028 Alpha/beta knot methyltransferases smi_0831 IPR005144 ATP-cone smi_0834 IPR003784 BioY protein smi_0836 IPR003439 ABC transporter-like smi_0836 IPR003593 AAA+ ATPase domain smi_0836 IPR017871 ABC transporter, conserved site smi_0836 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0838 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain smi_0838 IPR006322 Glutathione reductase, eukaryote/bacterial smi_0838 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site smi_0838 IPR016156 FAD/NAD-linked reductase, dimerisation domain smi_0838 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain smi_0839 IPR032317 smi_0839 smi_0840 IPR003439 ABC transporter-like smi_0840 IPR003593 AAA+ ATPase domain smi_0840 IPR017871 ABC transporter, conserved site smi_0840 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0841 IPR003838 Permease FtsX-like smi_0841 IPR025857 MacB-like periplasmic core domain smi_0842 IPR002547 tRNA-binding domain smi_0842 IPR004495 Methionyl-tRNA synthetase, class Ia, beta subunit, C-terminal smi_0842 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding smi_0842 IPR012340 Nucleic acid-binding, OB-fold smi_0842 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold smi_0842 IPR014758 Methionyl-tRNA synthetase smi_0842 IPR015413 Methionyl/Leucyl tRNA synthetase smi_0842 IPR023457 Methionine-tRNA synthetase, type 2 smi_0843 IPR001395 Aldo/keto reductase smi_0843 IPR020471 Aldo/keto reductase subgroup smi_0843 IPR023210 NADP-dependent oxidoreductase domain smi_0844 IPR021361 Protein of unknown function DUF2829 smi_0845 IPR002347 Glucose/ribitol dehydrogenase smi_0845 IPR016040 NAD(P)-binding domain smi_0845 IPR020904 Short-chain dehydrogenase/reductase, conserved site smi_0846 IPR000086 NUDIX hydrolase domain smi_0846 IPR015797 NUDIX hydrolase domain-like smi_0846 IPR020084 NUDIX hydrolase, conserved site smi_0847 IPR016181 Acyl-CoA N-acyltransferase smi_0847 IPR027365 GNAT acetyltransferase YdfB-like smi_0848 IPR023577 CYTH-like domain smi_0848 IPR033469 smi_0848 smi_0849 IPR007374 ASCH domain smi_0849 IPR009326 Protein of unknown function DUF984 smi_0849 IPR015947 PUA-like domain smi_0850 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase smi_0850 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal smi_0850 IPR024571 ERAP1-like C-terminal domain smi_0851 IPR001789 Signal transduction response regulator, receiver domain smi_0851 IPR001867 Signal transduction response regulator, C-terminal smi_0851 IPR011006 CheY-like superfamily smi_0851 IPR011991 Winged helix-turn-helix DNA-binding domain smi_0852 IPR003594 Histidine kinase-like ATPase, C-terminal domain smi_0852 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain smi_0852 IPR004358 Signal transduction histidine kinase-related protein, C-terminal smi_0853 IPR021688 Protein of unknown function DUF3270 smi_0854 IPR001539 Peptidase U32 smi_0854 IPR013785 Aldolase-type TIM barrel smi_0855 IPR006054 DNA polymerase III, epsilon subunit smi_0855 IPR006310 DnaQ exonuclease/DinG helicase, predicted smi_0855 IPR006555 ATP-dependent helicase, C-terminal smi_0855 IPR011545 DEAD/DEAH box helicase domain smi_0855 IPR012337 Ribonuclease H-like domain smi_0855 IPR013520 Exonuclease, RNase T/DNA polymerase III smi_0855 IPR014001 Helicase, superfamily 1/2, ATP-binding domain smi_0855 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0856 IPR001182 Cell cycle protein FtsW/RodA smi_0856 IPR011923 Rod shape-determining protein RodA smi_0856 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site smi_0857 IPR002818 ThiJ/PfpI smi_0857 IPR006287 DJ-1 smi_0857 IPR029062 Class I glutamine amidotransferase-like smi_0858 IPR012337 Ribonuclease H-like domain smi_0858 IPR025246 Transposase IS30-like HTH domain smi_0859 IPR006439 HAD hydrolase, subfamily IA smi_0859 IPR023198 Phosphoglycolate phosphatase, domain 2 smi_0859 IPR023214 HAD-like domain smi_0860 IPR000565 DNA topoisomerase, type IIA, subunit B smi_0860 IPR001241 DNA topoisomerase, type IIA smi_0860 IPR002288 DNA gyrase B subunit, C-terminal smi_0860 IPR003594 Histidine kinase-like ATPase, C-terminal domain smi_0860 IPR006171 Toprim domain smi_0860 IPR011557 DNA gyrase, subunit B smi_0860 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 smi_0860 IPR013759 DNA topoisomerase, type IIA, central domain smi_0860 IPR013760 DNA topoisomerase, type IIA-like domain smi_0860 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup smi_0860 IPR018522 DNA topoisomerase, type IIA, conserved site smi_0860 IPR020568 Ribosomal protein S5 domain 2-type fold smi_0861 IPR010379 Septation ring formation regulator EzrA smi_0862 IPR000182 GNAT domain smi_0862 IPR016181 Acyl-CoA N-acyltransferase smi_0863 IPR014959 Protein of unknown function DUF1827 smi_0864 IPR000086 NUDIX hydrolase domain smi_0864 IPR015797 NUDIX hydrolase domain-like smi_0864 IPR020084 NUDIX hydrolase, conserved site smi_0864 IPR020476 NUDIX hydrolase smi_0865 IPR001270 ClpA/B family smi_0865 IPR001943 UVR domain smi_0865 IPR003593 AAA+ ATPase domain smi_0865 IPR003959 ATPase, AAA-type, core smi_0865 IPR018368 ClpA/B, conserved site 1 smi_0865 IPR019489 Clp ATPase, C-terminal smi_0865 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0865 IPR028299 ClpA/B, conserved site 2 smi_0866 IPR014904 Protein of unknown function DUF1797 smi_0867 IPR000515 MetI-like domain smi_0867 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family smi_0868 IPR003439 ABC transporter-like smi_0868 IPR003593 AAA+ ATPase domain smi_0868 IPR017871 ABC transporter, conserved site smi_0868 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0868 IPR030679 smi_0868 smi_0869 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase smi_0869 IPR016040 NAD(P)-binding domain smi_0869 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain smi_0869 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain smi_0869 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site smi_0871 IPR000631 YjeF C-terminal domain smi_0871 IPR017953 Carbohydrate kinase, predicted, conserved site smi_0871 IPR029056 Ribokinase-like smi_0873 IPR004788 Ribose 5-phosphate isomerase, type A smi_0873 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup smi_0874 IPR006124 Metalloenzyme smi_0874 IPR010045 Phosphopentomutase smi_0874 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha smi_0874 IPR017850 Alkaline-phosphatase-like, core domain smi_0874 IPR024052 Phosphopentomutase DeoB cap domain smi_0875 IPR012545 Protein of unknown function DUF1697 smi_0876 IPR000845 Nucleoside phosphorylase domain smi_0876 IPR001369 PNP/MTAP phosphorylase smi_0876 IPR011268 Purine nucleoside phosphorylase smi_0876 IPR011270 Purine nucleoside phosphorylase I, inosine/guanosine-specific smi_0876 IPR018099 Purine phosphorylase, family 2, conserved site smi_0877 IPR001807 Chloride channel, voltage gated smi_0877 IPR014743 Chloride channel, core smi_0878 IPR017926 Glutamine amidotransferase smi_0878 IPR029062 Class I glutamine amidotransferase-like smi_0879 IPR000845 Nucleoside phosphorylase domain smi_0879 IPR004402 Purine nucleoside phosphorylase DeoD-type smi_0879 IPR018016 Nucleoside phosphorylase, conserved site smi_0879 IPR018017 Nucleoside phosphorylase smi_0880 IPR003000 Sirtuin family smi_0880 IPR026591 Sirtuin family, catalytic core small domain smi_0880 IPR029035 DHS-like NAD/FAD-binding domain smi_0881 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0882 IPR002583 Ribosomal protein S20 smi_0883 IPR004566 Bacterial pantothenate kinase smi_0883 IPR006083 Phosphoribulokinase/uridine kinase smi_0883 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0885 IPR000551 MerR-type HTH domain smi_0885 IPR009061 DNA binding domain, putative smi_0885 IPR011794 Hg(II)-responsive transcriptional regulator smi_0886 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain smi_0886 IPR006121 Heavy metal-associated domain, HMA smi_0886 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site smi_0886 IPR016156 FAD/NAD-linked reductase, dimerisation domain smi_0886 IPR021179 Mercury reductase, MerA smi_0886 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain smi_0888 IPR007848 Methyltransferase small domain smi_0888 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like smi_0889 IPR000053 Pyrimidine-nucleoside phosphorylase smi_0889 IPR000312 Glycosyl transferase, family 3 smi_0889 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal smi_0889 IPR017459 Glycosyl transferase family 3, N-terminal domain smi_0889 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site smi_0889 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic smi_0890 IPR002915 DeoC/FbaB/ lacD aldolase smi_0890 IPR011343 Deoxyribose-phosphate aldolase smi_0890 IPR013785 Aldolase-type TIM barrel smi_0890 IPR028581 Deoxyribose-phosphate aldolase type I smi_0891 IPR002125 CMP/dCMP deaminase, zinc-binding smi_0891 IPR006262 Cytidine deaminase, homotetrameric smi_0891 IPR016192 APOBEC/CMP deaminase, zinc-binding smi_0891 IPR016193 Cytidine deaminase-like smi_0892 IPR003760 Basic membrane lipoprotein smi_0892 IPR028082 Periplasmic binding protein-like I smi_0893 IPR003439 ABC transporter-like smi_0893 IPR003593 AAA+ ATPase domain smi_0893 IPR017871 ABC transporter, conserved site smi_0893 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0894 IPR001851 ABC transporter, permease smi_0895 IPR001851 ABC transporter, permease smi_0896 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY smi_0897 IPR000565 DNA topoisomerase, type IIA, subunit B smi_0897 IPR001241 DNA topoisomerase, type IIA smi_0897 IPR002288 DNA gyrase B subunit, C-terminal smi_0897 IPR003594 Histidine kinase-like ATPase, C-terminal domain smi_0897 IPR005740 DNA topoisomerase 4 subunit B, Gram-positive smi_0897 IPR006171 Toprim domain smi_0897 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 smi_0897 IPR013759 DNA topoisomerase, type IIA, central domain smi_0897 IPR013760 DNA topoisomerase, type IIA-like domain smi_0897 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup smi_0897 IPR018522 DNA topoisomerase, type IIA, conserved site smi_0897 IPR020568 Ribosomal protein S5 domain 2-type fold smi_0898 IPR003115 ParB/Sulfiredoxin smi_0898 IPR004919 Domain of unknown function DUF262 smi_0903 IPR000182 GNAT domain smi_0903 IPR016181 Acyl-CoA N-acyltransferase smi_0905 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal smi_0905 IPR005741 DNA topoisomerase IV subunit A, Gram-positive smi_0905 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel smi_0905 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta smi_0905 IPR013760 DNA topoisomerase, type IIA-like domain smi_0905 IPR024946 Arginine repressor C-terminal-like domain smi_0906 IPR001544 Aminotransferase, class IV smi_0906 IPR005786 Branched-chain amino acid aminotransferase II smi_0906 IPR018300 Aminotransferase, class IV, conserved site smi_0907 IPR000914 Bacterial extracellular solute-binding protein, family 5 smi_0907 IPR023765 Bacterial extracellular solute-binding protein, family 5, conserved site smi_0908 IPR021351 Protein of unknown function DUF2969 smi_0911 IPR000110 Ribosomal protein S1 smi_0911 IPR003029 Ribosomal protein S1, RNA-binding domain smi_0911 IPR012340 Nucleic acid-binding, OB-fold smi_0911 IPR022967 RNA-binding domain, S1 smi_0912 IPR003018 GAF domain smi_0912 IPR029016 GAF domain-like smi_0913 IPR001270 ClpA/B family smi_0913 IPR003593 AAA+ ATPase domain smi_0913 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal smi_0913 IPR012763 DNA polymerase III, subunit gamma/ tau smi_0913 IPR022754 DNA polymerase III, gamma subunit, domain III smi_0913 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0914 IPR021690 Protein of unknown function DUF3272 smi_0915 IPR003439 ABC transporter-like smi_0915 IPR003593 AAA+ ATPase domain smi_0915 IPR010230 FeS cluster assembly SUF system, ATPase SufC smi_0915 IPR017871 ABC transporter, conserved site smi_0915 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0916 IPR000825 SUF system FeS cluster assembly, SufBD smi_0916 IPR011542 SUF system FeS cluster assembly, SufD smi_0917 IPR000192 Aminotransferase class V domain smi_0917 IPR010970 Cysteine desulfurase, SufS smi_0917 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 smi_0917 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 smi_0917 IPR015424 Pyridoxal phosphate-dependent transferase smi_0917 IPR016454 Cysteine desulfurase, NifS smi_0917 IPR020578 Aminotransferase class-V pyridoxal-phosphate binding site smi_0918 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal smi_0919 IPR000825 SUF system FeS cluster assembly, SufBD smi_0919 IPR010231 SUF system FeS cluster assembly, SufB smi_0920 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal smi_0920 IPR012338 Beta-lactamase/transpeptidase-like smi_0920 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal smi_0920 IPR015956 Penicillin-binding protein-associated smi_0920 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A smi_0921 IPR002549 Uncharacterised protein family UPF0118 smi_0922 IPR000795 Elongation factor, GTP-binding domain smi_0922 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal smi_0922 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 smi_0922 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle smi_0922 IPR005225 Small GTP-binding protein domain smi_0922 IPR009000 Translation protein, beta-barrel domain smi_0922 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal smi_0922 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0922 IPR031157 smi_0922 smi_0923 IPR001650 Helicase, C-terminal smi_0923 IPR011545 DEAD/DEAH box helicase domain smi_0923 IPR014001 Helicase, superfamily 1/2, ATP-binding domain smi_0923 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0924 IPR000683 Oxidoreductase, N-terminal smi_0924 IPR016040 NAD(P)-binding domain smi_0925 IPR012337 Ribonuclease H-like domain smi_0925 IPR025246 Transposase IS30-like HTH domain smi_0926 IPR001787 Ribosomal protein L21 smi_0926 IPR018258 Ribosomal protein L21, conserved site smi_0926 IPR028909 Ribosomal protein L21-like smi_0927 IPR007422 Protein of unknown function DUF464 smi_0928 IPR001684 Ribosomal protein L27 smi_0928 IPR018261 Ribosomal protein L27, conserved site smi_0929 IPR012337 Ribonuclease H-like domain smi_0929 IPR025246 Transposase IS30-like HTH domain smi_0930 IPR000847 Transcription regulator HTH, LysR smi_0930 IPR005119 LysR, substrate-binding smi_0930 IPR011991 Winged helix-turn-helix DNA-binding domain smi_0931 IPR001872 Peptidase A8, signal peptidase II smi_0932 IPR002942 RNA-binding S4 domain smi_0932 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F smi_0932 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site smi_0932 IPR006225 Pseudouridine synthase, RluC/RluD smi_0932 IPR020103 Pseudouridine synthase, catalytic domain smi_0933 IPR001279 Beta-lactamase-like smi_0934 IPR001279 Beta-lactamase-like smi_0934 IPR018337 Cell wall/choline-binding repeat smi_0935 IPR001048 Aspartate/glutamate/uridylate kinase smi_0935 IPR001057 Glutamate/acetylglutamate kinase smi_0935 IPR002478 PUA domain smi_0935 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase smi_0935 IPR011529 Glutamate 5-kinase smi_0935 IPR015947 PUA-like domain smi_0935 IPR019797 Glutamate 5-kinase, conserved site smi_0936 IPR000965 Gamma-glutamyl phosphate reductase GPR smi_0936 IPR012134 Glutamate-5-semialdehyde dehydrogenase smi_0936 IPR015590 Aldehyde dehydrogenase domain smi_0936 IPR016161 Aldehyde/histidinol dehydrogenase smi_0936 IPR016162 Aldehyde dehydrogenase, N-terminal smi_0936 IPR016163 Aldehyde dehydrogenase, C-terminal smi_0936 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site smi_0937 IPR000304 Pyrroline-5-carboxylate reductase smi_0937 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like smi_0937 IPR016040 NAD(P)-binding domain smi_0937 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal smi_0937 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain smi_0938 IPR018094 Thymidylate kinase smi_0938 IPR018095 Thymidylate kinase, conserved site smi_0938 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0939 IPR004622 DNA polymerase III, delta prime subunit smi_0939 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0940 IPR010377 Initiation control protein YabA smi_0941 IPR000878 Tetrapyrrole methylase smi_0941 IPR008189 rRNA small subunit methyltransferase I smi_0941 IPR014776 Tetrapyrrole methylase, subdomain 2 smi_0941 IPR014777 Tetrapyrrole methylase, subdomain 1 smi_0941 IPR018063 SAM-dependent methyltransferase RsmI, conserved site smi_0942 IPR001525 C-5 cytosine methyltransferase smi_0942 IPR018117 DNA methylase, C-5 cytosine-specific, active site smi_0942 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like smi_0942 IPR031303 smi_0942 smi_0943 IPR021108 Restriction endonuclease, type II, BpuJI, N-terminal smi_0943 IPR024975 Domain of unknown function DUF3883 smi_0944 IPR001525 C-5 cytosine methyltransferase smi_0944 IPR018117 DNA methylase, C-5 cytosine-specific, active site smi_0944 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like smi_0944 IPR031303 smi_0944 smi_0945 IPR026001 Abortive infection protein-like, C-terminal domain smi_0948 IPR002218 Glucose-inhibited division protein A-related smi_0948 IPR004417 Folate-dependent ribothymidyl synthase smi_0948 IPR020595 Glucose-inhibited division protein A-related, conserved site smi_0948 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain smi_0949 IPR001048 Aspartate/glutamate/uridylate kinase smi_0949 IPR011817 Uridylate kinase smi_0949 IPR015963 Uridylate kinase, bacteria smi_0950 IPR002661 Ribosome recycling factor smi_0950 IPR023584 Ribosome recycling factor domain smi_0951 IPR012340 Nucleic acid-binding, OB-fold smi_0951 IPR014464 Conserved virulence factor B smi_0952 IPR010673 Protein of unknown function UPF0346 smi_0952 IPR023089 YozE-like domain smi_0953 IPR003714 PhoH-like protein smi_0953 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0954 IPR000182 GNAT domain smi_0954 IPR016181 Acyl-CoA N-acyltransferase smi_0955 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 smi_0955 IPR004509 Competence protein ComEA, helix-hairpin-helix domain smi_0955 IPR004787 Competence protein ComEA smi_0955 IPR010994 RuvA domain 2-like smi_0955 IPR019554 Soluble ligand binding domain smi_0956 IPR001279 Beta-lactamase-like smi_0956 IPR004477 ComEC/Rec2-related protein smi_0956 IPR004797 Competence protein ComEC/Rec2 smi_0956 IPR025405 Domain of unknown function DUF4131 smi_0957 IPR003439 ABC transporter-like smi_0957 IPR003593 AAA+ ATPase domain smi_0957 IPR017871 ABC transporter, conserved site smi_0957 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0959 IPR001288 Translation initiation factor 3 smi_0959 IPR019813 Translation initiation factor 3, conserved site smi_0959 IPR019814 Translation initiation factor 3, N-terminal smi_0959 IPR019815 Translation initiation factor 3, C-terminal smi_0960 IPR001706 Ribosomal protein L35, non-mitochondrial smi_0960 IPR018265 Ribosomal protein L35, conserved site smi_0960 IPR021137 Ribosomal protein L35 smi_0961 IPR005813 Ribosomal protein L20 smi_0962 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain smi_0962 IPR018146 Glyoxalase I, conserved site smi_0962 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase smi_0963 IPR012337 Ribonuclease H-like domain smi_0963 IPR025246 Transposase IS30-like HTH domain smi_0964 IPR000951 Phthalate dioxygenase reductase smi_0964 IPR001433 Oxidoreductase FAD/NAD(P)-binding smi_0964 IPR008333 Oxidoreductase, FAD-binding domain smi_0964 IPR012165 Cytochrome-c3 hydrogenase, gamma subunit smi_0964 IPR017938 Riboflavin synthase-like beta-barrel smi_0964 IPR019480 Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain smi_0964 IPR023455 Dihydroorotate dehydrogenase electron transfer subunit smi_0965 IPR001295 Dihydroorotate dehydrogenase, conserved site smi_0965 IPR005720 Dihydroorotate dehydrogenase domain smi_0965 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 smi_0965 IPR013785 Aldolase-type TIM barrel smi_0965 IPR024920 Dihydroorotate dehydrogenase, class 1 smi_0966 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain smi_0966 IPR018337 Cell wall/choline-binding repeat smi_0967 IPR008532 Domain of unknown function DUF814 smi_0968 IPR002036 Endoribonuclease YbeY smi_0968 IPR020549 Endoribonuclease YbeY, conserved site smi_0968 IPR023091 Metalloprotease catalytic domain, predicted smi_0969 IPR000829 Diacylglycerol kinase, prokaryotic smi_0970 IPR004044 K Homology domain, type 2 smi_0970 IPR005225 Small GTP-binding protein domain smi_0970 IPR005662 GTP-binding protein Era smi_0970 IPR006073 GTP binding domain smi_0970 IPR009019 K homology domain, prokaryotic type smi_0970 IPR015946 K homology domain-like, alpha/beta smi_0970 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0971 IPR010663 Zinc finger, DNA glycosylase/AP lyase/isoleucyl tRNA synthetase smi_0971 IPR010979 Ribosomal protein S13-like, H2TH smi_0971 IPR012319 DNA glycosylase/AP lyase, catalytic domain smi_0971 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding smi_0971 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site smi_0971 IPR020629 Formamidopyrimidine-DNA glycosylase smi_0972 IPR001977 Dephospho-CoA kinase smi_0972 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0973 IPR001958 Tetracycline resistance protein, TetA/multidrug resistance protein MdtG smi_0973 IPR005828 General substrate transporter smi_0973 IPR011701 Major facilitator superfamily smi_0973 IPR020846 Major facilitator superfamily domain smi_0974 IPR001705 Ribosomal protein L33 smi_0974 IPR011332 Zinc-binding ribosomal protein smi_0974 IPR018264 Ribosomal protein L33, conserved site smi_0975 IPR004692 Preprotein translocase SecG subunit smi_0976 IPR003029 Ribosomal protein S1, RNA-binding domain smi_0976 IPR004476 Ribonuclease II/ribonuclease R smi_0976 IPR011805 Ribonuclease R smi_0976 IPR012340 Nucleic acid-binding, OB-fold smi_0976 IPR013223 Ribonuclease B, N-terminal OB domain smi_0976 IPR022966 Ribonuclease II/R, conserved site smi_0976 IPR022967 RNA-binding domain, S1 smi_0977 IPR000037 SsrA-binding protein smi_0977 IPR020081 SsrA-binding protein, conserved site smi_0977 IPR023620 Small protein B smi_0978 IPR004537 Tellurite resistance methyltransferase, TehB smi_0978 IPR014431 Tellurite resistance methyltransferase, TehB type-2 smi_0978 IPR014710 RmlC-like jelly roll fold smi_0978 IPR015392 Domain of unknown function DUF1971 smi_0978 IPR015985 Tellurite resistance methyltransferase TehB-like domain smi_0978 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like smi_0979 IPR005877 YSIRK Gram-positive signal peptide smi_0979 IPR011439 Domain of unknown function DUF1542 smi_0979 IPR019931 LPXTG cell wall anchor domain smi_0979 IPR019948 Gram-positive anchor smi_0979 IPR026359 SasC/Mrp/FmtB intercellular aggregation domain smi_0980 IPR010330 Competence-induced protein CoiA-like smi_0980 IPR021176 Competence-induced protein CoiA-like, bacterial smi_0981 IPR001567 Peptidase M3A/M3B smi_0981 IPR004438 Peptidase M3B, oligoendopeptidase F smi_0981 IPR013647 Oligopeptidase F, N-terminal domain smi_0981 IPR024079 Metallopeptidase, catalytic domain smi_0982 IPR002935 O-methyltransferase, family 3 smi_0982 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like smi_0983 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type smi_0983 IPR008880 Trigger factor, C-terminal domain smi_0983 IPR023059 Foldase protein PrsA smi_0983 IPR027304 Trigger factor/SurA domain smi_0984 IPR001182 Cell cycle protein FtsW/RodA smi_0985 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain smi_0985 IPR018129 Phosphoenolpyruvate carboxylase, active site smi_0985 IPR021135 Phosphoenolpyruvate carboxylase smi_0985 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type smi_0985 IPR033129 smi_0985 smi_0986 IPR012337 Ribonuclease H-like domain smi_0986 IPR025246 Transposase IS30-like HTH domain smi_0987 IPR012337 Ribonuclease H-like domain smi_0987 IPR025246 Transposase IS30-like HTH domain smi_0988 IPR007487 ABC transporter, substrate-binding protein smi_0988 IPR028082 Periplasmic binding protein-like I smi_0989 IPR001851 ABC transporter, permease smi_0990 IPR003439 ABC transporter-like smi_0990 IPR003593 AAA+ ATPase domain smi_0990 IPR017871 ABC transporter, conserved site smi_0990 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0991 IPR002694 Zinc finger, CHC2-type smi_0991 IPR006171 Toprim domain smi_0991 IPR006295 DNA primase, DnaG smi_0991 IPR013264 DNA primase, catalytic core, N-terminal smi_0991 IPR030846 smi_0991 smi_0992 IPR000943 RNA polymerase sigma-70 smi_0992 IPR007127 RNA polymerase sigma factor 70, region 1.1 smi_0992 IPR007624 RNA polymerase sigma-70 region 3 smi_0992 IPR007627 RNA polymerase sigma-70 region 2 smi_0992 IPR007630 RNA polymerase sigma-70 region 4 smi_0992 IPR009042 RNA polymerase sigma-70 region 1.2 smi_0992 IPR011991 Winged helix-turn-helix DNA-binding domain smi_0992 IPR012760 RNA polymerase sigma factor RpoD, C-terminal smi_0992 IPR013324 RNA polymerase sigma factor, region 3/4 smi_0992 IPR013325 RNA polymerase sigma factor, region 2 smi_0992 IPR014284 RNA polymerase sigma-70 like domain smi_0992 IPR028630 RNA polymerase sigma factor RpoD smi_0993 IPR002744 Domain of unknown function DUF59 smi_0994 IPR001296 Glycosyl transferase, family 1 smi_0994 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain smi_0995 IPR001296 Glycosyl transferase, family 1 smi_0995 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain smi_0996 IPR007168 Phage shock protein, PspC, N-terminal smi_0997 IPR025270 Protein of unknown function DUF4044 smi_0998 IPR005225 Small GTP-binding protein domain smi_0998 IPR006073 GTP binding domain smi_0998 IPR006074 GTP1/OBG, conserved site smi_0998 IPR006169 GTP1/OBG domain smi_0998 IPR014100 GTP-binding protein Obg/CgtA smi_0998 IPR015349 GTP-binding protein OBG, C-terminal smi_0998 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1000 IPR001669 Arginine repressor smi_1000 IPR011991 Winged helix-turn-helix DNA-binding domain smi_1000 IPR020899 Arginine repressor, C-terminal smi_1000 IPR020900 Arginine repressor, DNA-binding domain smi_1000 IPR024946 Arginine repressor C-terminal-like domain smi_1001 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain smi_1001 IPR008252 Peptidase S15, X-Pro dipeptidyl-peptidase smi_1001 IPR008979 Galactose-binding domain-like smi_1001 IPR013736 Xaa-Pro dipeptidyl-peptidase, C-terminal smi_1001 IPR015251 X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal domain smi_1001 IPR029058 Alpha/Beta hydrolase fold smi_1002 IPR005877 YSIRK Gram-positive signal peptide smi_1002 IPR019931 LPXTG cell wall anchor domain smi_1002 IPR019948 Gram-positive anchor smi_1003 IPR003141 Polymerase/histidinol phosphatase, N-terminal smi_1003 IPR004013 PHP, C-terminal smi_1003 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type smi_1003 IPR004805 DNA polymerase III, alpha subunit smi_1003 IPR011708 Bacterial DNA polymerase III, alpha subunit smi_1003 IPR012340 Nucleic acid-binding, OB-fold smi_1003 IPR016195 Polymerase/histidinol phosphatase-like smi_1003 IPR029460 DNA polymerase, helix-hairpin-helix motif smi_1004 IPR000023 Phosphofructokinase domain smi_1004 IPR012003 ATP-dependent phosphofructokinase, prokaryotic-type smi_1004 IPR012828 6-phosphofructokinase smi_1004 IPR015912 Phosphofructokinase, conserved site smi_1004 IPR022953 Phosphofructokinase smi_1005 IPR001697 Pyruvate kinase smi_1005 IPR011037 Pyruvate kinase-like, insert domain smi_1005 IPR015793 Pyruvate kinase, barrel smi_1005 IPR015794 Pyruvate kinase, alpha/beta smi_1005 IPR015795 Pyruvate kinase, C-terminal smi_1005 IPR015806 Pyruvate kinase, beta-barrel insert domain smi_1005 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain smi_1006 IPR001236 Lactate/malate dehydrogenase, N-terminal smi_1006 IPR001557 L-lactate/malate dehydrogenase smi_1006 IPR011304 L-lactate dehydrogenase smi_1006 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal smi_1006 IPR016040 NAD(P)-binding domain smi_1006 IPR018177 L-lactate dehydrogenase, active site smi_1006 IPR022383 Lactate/malate dehydrogenase, C-terminal smi_1007 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal smi_1007 IPR005743 DNA gyrase, subunit A smi_1007 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel smi_1007 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta smi_1007 IPR013760 DNA topoisomerase, type IIA-like domain smi_1007 IPR024946 Arginine repressor C-terminal-like domain smi_1008 IPR005754 Sortase family smi_1008 IPR023365 Sortase domain smi_1009 IPR000292 Formate/nitrite transporter smi_1009 IPR023271 Aquaporin-like smi_1010 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme smi_1010 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase smi_1010 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 smi_1010 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 smi_1010 IPR015424 Pyridoxal phosphate-dependent transferase smi_1011 IPR019219 Protein of unknown function DUF2130 smi_1012 IPR002501 Pseudouridine synthase II smi_1012 IPR014780 tRNA pseudouridine synthase II, TruB smi_1012 IPR020103 Pseudouridine synthase, catalytic domain smi_1012 IPR032819 smi_1012 smi_1013 IPR000764 Uridine kinase like smi_1013 IPR006083 Phosphoribulokinase/uridine kinase smi_1013 IPR026008 Uridine kinase smi_1013 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1014 IPR003753 Exonuclease VII, large subunit smi_1014 IPR020579 Exonuclease VII, large subunit, C-terminal smi_1014 IPR025824 OB-fold nucleic acid binding domain smi_1015 IPR003761 Exonuclease VII, small subunit smi_1016 IPR000092 Polyprenyl synthetase smi_1016 IPR008949 Terpenoid synthase smi_1016 IPR017446 Polyprenyl synthetase-related smi_1017 IPR002877 Ribosomal RNA methyltransferase FtsJ domain smi_1017 IPR002942 RNA-binding S4 domain smi_1017 IPR004538 Haemolysin A smi_1017 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like smi_1018 IPR001669 Arginine repressor smi_1018 IPR011991 Winged helix-turn-helix DNA-binding domain smi_1018 IPR020899 Arginine repressor, C-terminal smi_1018 IPR020900 Arginine repressor, DNA-binding domain smi_1018 IPR024946 Arginine repressor C-terminal-like domain smi_1019 IPR003395 RecF/RecN/SMC, N-terminal smi_1019 IPR004604 DNA recombination/repair protein RecN smi_1019 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1020 IPR004843 Calcineurin-like phosphoesterase domain, apaH type smi_1020 IPR029052 Metallo-dependent phosphatase-like smi_1021 IPR000640 Translation elongation factor EFG, V domain smi_1021 IPR000795 Elongation factor, GTP-binding domain smi_1021 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 smi_1021 IPR005225 Small GTP-binding protein domain smi_1021 IPR006297 Elongation factor 4 smi_1021 IPR009000 Translation protein, beta-barrel domain smi_1021 IPR009022 Elongation factor G, III-V domain smi_1021 IPR013842 GTP-binding protein LepA, C-terminal smi_1021 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1021 IPR031157 smi_1021 smi_1022 IPR002178 PTS EIIA type-2 domain smi_1022 IPR016152 Phosphotransferase/anion transporter smi_1023 IPR003501 Phosphotransferase system, EIIB component, type 2/3 smi_1024 IPR004703 Phosphotransferase system, sugar-specific permease component smi_1024 IPR013853 Galactitol permease IIC component smi_1025 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase smi_1025 IPR011013 Galactose mutarotase-like domain smi_1025 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup smi_1026 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family smi_1026 IPR004783 Galactose-6-phosphate isomerase subunit LacA smi_1027 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family smi_1027 IPR004784 Galactose-6-phosphate isomerase subunit LacB smi_1028 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site smi_1028 IPR005926 Tagatose-6-phosphate kinase smi_1028 IPR011611 Carbohydrate kinase PfkB smi_1028 IPR017583 Tagatose/fructose phosphokinase smi_1028 IPR023314 Tagatose-6-phosphate kinase/1-phosphofructokinase N-terminal domain smi_1028 IPR029056 Ribokinase-like smi_1029 IPR002915 DeoC/FbaB/ lacD aldolase smi_1029 IPR005927 Tagatose 1,6-diphosphate aldolase smi_1029 IPR013785 Aldolase-type TIM barrel smi_1030 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family smi_1031 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family smi_1032 IPR000944 Transcription regulator Rrf2-like smi_1032 IPR011991 Winged helix-turn-helix DNA-binding domain smi_1032 IPR030489 smi_1032 smi_1033 IPR000620 Drug/metabolite transporter smi_1034 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like smi_1035 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like smi_1036 IPR004341 CAT RNA-binding domain smi_1036 IPR011608 PRD domain smi_1037 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit smi_1038 IPR003352 Phosphotransferase system, EIIC smi_1038 IPR003501 Phosphotransferase system, EIIB component, type 2/3 smi_1038 IPR004501 Phosphotransferase system, EIIC component, type 3 smi_1038 IPR004801 Phosphotransferase system, lactose-specific IIC component smi_1038 IPR013012 Phosphotransferase system, EIIB component, type 3 smi_1039 IPR001360 Glycoside hydrolase, family 1 smi_1039 IPR005928 6-phospho-beta-galactosidase smi_1039 IPR013781 Glycoside hydrolase, catalytic domain smi_1039 IPR017853 Glycoside hydrolase, superfamily smi_1039 IPR018120 Glycoside hydrolase, family 1, active site smi_1039 IPR033132 smi_1039 smi_1040 IPR024979 Protein of unknown function DUF3884 smi_1041 IPR001034 HTH DeoR N-terminal domain smi_1041 IPR011991 Winged helix-turn-helix DNA-binding domain smi_1041 IPR014036 DeoR C-terminal sensor domain smi_1042 IPR000358 Ribonucleotide reductase small subunit smi_1042 IPR009078 Ferritin-like superfamily smi_1042 IPR012348 Ribonucleotide reductase-related smi_1042 IPR026494 Ribonucleoside reductase subunit beta, NrdF smi_1043 IPR000788 Ribonucleotide reductase large subunit, C-terminal smi_1043 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal smi_1043 IPR013346 Ribonucleotide reductase, class I , alpha subunit smi_1043 IPR013509 Ribonucleotide reductase large subunit, N-terminal smi_1043 IPR013554 Ribonucleotide reductase N-terminal smi_1043 IPR026459 Ribonucleotide reductase, class 1b, subunit NrdE smi_1044 IPR002109 Glutaredoxin smi_1044 IPR011909 Glutaredoxin-like protein NrdH smi_1044 IPR012336 Thioredoxin-like fold smi_1045 IPR000032 Phosphocarrier HPr protein-like smi_1045 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site smi_1045 IPR002114 Phosphotransferase system, HPr serine phosphorylation site smi_1046 IPR000121 PEP-utilising enzyme, C-terminal smi_1046 IPR006318 Phosphoenolpyruvate-utilising enzyme smi_1046 IPR008279 PEP-utilising enzyme, mobile domain smi_1046 IPR008731 Phosphotransferase system, enzyme I N-terminal smi_1046 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain smi_1046 IPR018274 PEP-utilising enzyme, active site smi_1046 IPR023151 PEP-utilising enzyme, conserved site smi_1046 IPR024692 Phosphotransferase system, enzyme I smi_1047 IPR005358 Putative zinc- or iron-chelating domain containing protein smi_1048 IPR012550 Protein of unknown function DUF1706 smi_1048 IPR027369 DinB/YfiT-like putative metal-dependent hydrolase smi_1049 IPR004006 Dak kinase smi_1049 IPR012735 Dihydroxyacetone kinase DhaK, subunit 1b smi_1050 IPR001647 DNA-binding HTH domain, TetR-type smi_1050 IPR009057 Homeodomain-like smi_1050 IPR012738 Transcription regulator DhaS smi_1050 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal smi_1051 IPR004006 Dak kinase smi_1051 IPR012736 Dihydroxyacetone kinase DhaK, subunit 1 smi_1052 IPR004007 DhaL domain smi_1052 IPR012737 Dihydroxyacetone kinase, subunit L smi_1053 IPR004701 Phosphotransferase system, mannose-type IIA component smi_1054 IPR006439 HAD hydrolase, subfamily IA smi_1054 IPR011951 HAD-superfamily hydrolase, subfamily IA, YjjG/YfnB smi_1054 IPR023198 Phosphoglycolate phosphatase, domain 2 smi_1054 IPR023214 HAD-like domain smi_1055 IPR002043 Uracil-DNA glycosylase smi_1055 IPR005122 Uracil-DNA glycosylase-like smi_1055 IPR018085 Uracil-DNA glycosylase, active site smi_1056 IPR000086 NUDIX hydrolase domain smi_1056 IPR003562 Mutator MutX protein smi_1056 IPR015797 NUDIX hydrolase domain-like smi_1056 IPR020084 NUDIX hydrolase, conserved site smi_1056 IPR020476 NUDIX hydrolase smi_1057 IPR002195 Dihydroorotase, conserved site smi_1057 IPR004722 Dihydroorotase smi_1057 IPR006680 Amidohydrolase 1 smi_1057 IPR011059 Metal-dependent hydrolase, composite domain smi_1057 IPR032466 smi_1057 smi_1058 IPR002528 Multi antimicrobial extrusion protein smi_1059 IPR002104 Integrase, catalytic smi_1059 IPR011010 DNA breaking-rejoining enzyme, catalytic core smi_1059 IPR013762 Integrase-like, catalytic core smi_1059 IPR023109 Integrase/recombinase, N-terminal smi_1059 IPR023670 Tyrosine recombinase XerS smi_1060 IPR011235 MepB-like smi_1061 IPR001807 Chloride channel, voltage gated smi_1061 IPR006037 Regulator of K+ conductance, C-terminal smi_1061 IPR014743 Chloride channel, core smi_1062 IPR001352 Ribonuclease HII/HIII smi_1062 IPR012337 Ribonuclease H-like domain smi_1062 IPR022898 Ribonuclease HII smi_1062 IPR024567 Ribonuclease HII/HIII domain smi_1063 IPR006073 GTP binding domain smi_1063 IPR016478 GTPase, MTG1 smi_1063 IPR019991 GTP-binding protein, ribosome biogenesis, YlqF smi_1063 IPR023179 GTP-binding protein, orthogonal bundle domain smi_1063 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1064 IPR005877 YSIRK Gram-positive signal peptide smi_1064 IPR009459 Protein of unknown function DUF1085 smi_1064 IPR027579 Surface protein repeat SSSPR-51 smi_1066 IPR000212 DNA helicase, UvrD/REP type smi_1066 IPR011335 Restriction endonuclease type II-like smi_1066 IPR011604 Exonuclease, phage-type/RecB, C-terminal smi_1066 IPR014016 UvrD-like Helicase, ATP-binding domain smi_1066 IPR014017 DNA helicase, UvrD-like, C-terminal smi_1066 IPR014152 DNA helicase subunit AddA smi_1066 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1067 IPR011335 Restriction endonuclease type II-like smi_1067 IPR014141 DNA helicase subunit RexB smi_1067 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1068 IPR012337 Ribonuclease H-like domain smi_1068 IPR025246 Transposase IS30-like HTH domain smi_1069 IPR000150 Cof protein smi_1069 IPR006379 HAD-superfamily hydrolase, subfamily IIB smi_1069 IPR023214 HAD-like domain smi_1070 IPR003439 ABC transporter-like smi_1070 IPR003593 AAA+ ATPase domain smi_1070 IPR017871 ABC transporter, conserved site smi_1070 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1071 IPR032688 smi_1071 smi_1072 IPR003594 Histidine kinase-like ATPase, C-terminal domain smi_1072 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain smi_1073 IPR001789 Signal transduction response regulator, receiver domain smi_1073 IPR001867 Signal transduction response regulator, C-terminal smi_1073 IPR011006 CheY-like superfamily smi_1073 IPR011991 Winged helix-turn-helix DNA-binding domain smi_1074 IPR008217 Domain of unknown function DUF125, transmembrane smi_1075 IPR003838 Permease FtsX-like smi_1075 IPR027022 ABC transporter permease protein, BceB-type smi_1076 IPR003439 ABC transporter-like smi_1076 IPR003593 AAA+ ATPase domain smi_1076 IPR017871 ABC transporter, conserved site smi_1076 IPR019895 Putative bacteriocin export ABC transporter, lactococcin 972 group smi_1076 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1079 IPR007168 Phage shock protein, PspC, N-terminal smi_1080 IPR006640 Domain of unknown function SprT-like smi_1080 IPR023524 Uncharacterised protein family SprT-like smi_1081 IPR003029 Ribosomal protein S1, RNA-binding domain smi_1081 IPR006641 YqgF/RNase H-like domain smi_1081 IPR010994 RuvA domain 2-like smi_1081 IPR012337 Ribonuclease H-like domain smi_1081 IPR012340 Nucleic acid-binding, OB-fold smi_1081 IPR018974 Tex-like protein, N-terminal smi_1081 IPR022967 RNA-binding domain, S1 smi_1081 IPR023097 Tex RuvX-like domain smi_1081 IPR023319 Tex-like protein, HTH domain smi_1081 IPR023323 Tex-like domain smi_1081 IPR032639 smi_1081 smi_1084 IPR005524 Protein of unknown function DUF318, transmembrane smi_1084 IPR022324 Bacilysin exporter BacE, putative smi_1085 IPR015402 Protein of unknown function DUF1980 smi_1087 IPR012337 Ribonuclease H-like domain smi_1087 IPR025246 Transposase IS30-like HTH domain smi_1088 IPR029058 Alpha/Beta hydrolase fold smi_1090 IPR000212 DNA helicase, UvrD/REP type smi_1090 IPR011335 Restriction endonuclease type II-like smi_1090 IPR011604 Exonuclease, phage-type/RecB, C-terminal smi_1090 IPR014016 UvrD-like Helicase, ATP-binding domain smi_1090 IPR014017 DNA helicase, UvrD-like, C-terminal smi_1090 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1092 IPR001270 ClpA/B family smi_1092 IPR003593 AAA+ ATPase domain smi_1092 IPR003959 ATPase, AAA-type, core smi_1092 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1094 IPR011991 Winged helix-turn-helix DNA-binding domain smi_1094 IPR026881 WYL domain smi_1095 IPR011646 KAP P-loop smi_1095 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1096 IPR006383 HAD-superfamily hydrolase, subfamily IB, PSPase-like smi_1096 IPR006385 HAD-superfamily hydrolase, subfamily IB, PSPase-like, bacterial smi_1096 IPR023214 HAD-like domain smi_1097 IPR003607 HD/PDEase domain smi_1101 IPR010488 Zeta toxin domain smi_1101 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1102 IPR001387 Cro/C1-type helix-turn-helix domain smi_1102 IPR010982 Lambda repressor-like, DNA-binding domain smi_1102 IPR015090 Bacterial epsilon antitoxin smi_1104 IPR004185 Glycoside hydrolase, family 13, N-terminal Ig-like domain smi_1104 IPR006047 Glycosyl hydrolase, family 13, catalytic domain smi_1104 IPR013781 Glycoside hydrolase, catalytic domain smi_1104 IPR013783 Immunoglobulin-like fold smi_1104 IPR014756 Immunoglobulin E-set smi_1104 IPR015902 Glycoside hydrolase, family 13 smi_1104 IPR017853 Glycoside hydrolase, superfamily smi_1105 IPR001206 Diacylglycerol kinase, catalytic domain smi_1105 IPR005218 Diacylglycerol/lipid kinase smi_1105 IPR016064 ATP-NAD kinase-like domain smi_1105 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 smi_1106 IPR005502 ADP-ribosylation/Crystallin J1 smi_1107 IPR000073 Alpha/beta hydrolase fold-1 smi_1107 IPR029058 Alpha/Beta hydrolase fold smi_1108 IPR011989 Armadillo-like helical smi_1108 IPR014825 DNA alkylation repair enzyme smi_1108 IPR016024 Armadillo-type fold smi_1109 IPR011701 Major facilitator superfamily smi_1109 IPR020846 Major facilitator superfamily domain smi_1110 IPR005320 Peptidase S51 smi_1110 IPR029062 Class I glutamine amidotransferase-like smi_1111 IPR000182 GNAT domain smi_1111 IPR016181 Acyl-CoA N-acyltransferase smi_1111 IPR024170 Aminoglycoside N6-acetyltransferase smi_1116 IPR025643 Protein of unknown function DUF4343 smi_1117 IPR013321 Arc-type ribbon-helix-helix smi_1119 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD smi_1119 IPR010280 (Uracil-5)-methyltransferase family smi_1119 IPR012340 Nucleic acid-binding, OB-fold smi_1119 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like smi_1119 IPR030390 smi_1119 smi_1119 IPR030391 smi_1119 smi_1120 IPR009343 Protein of unknown function DUF1002 smi_1121 IPR023346 Lysozyme-like domain smi_1122 IPR007358 Nucleoid-associated protein NdpA smi_1123 IPR001085 Serine hydroxymethyltransferase smi_1123 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 smi_1123 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 smi_1123 IPR015424 Pyridoxal phosphate-dependent transferase smi_1123 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site smi_1124 IPR000182 GNAT domain smi_1124 IPR016181 Acyl-CoA N-acyltransferase smi_1125 IPR006070 YrdC-like domain smi_1125 IPR017945 DHBP synthase RibB-like alpha/beta domain smi_1126 IPR002052 DNA methylase, N-6 adenine-specific, conserved site smi_1126 IPR004556 Modification methylase HemK smi_1126 IPR007848 Methyltransferase small domain smi_1126 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific smi_1126 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like smi_1127 IPR000352 Peptide chain release factor class I/class II smi_1127 IPR004373 Peptide chain release factor 1 smi_1127 IPR005139 Peptide chain release factor smi_1127 IPR014720 Double-stranded RNA-binding domain smi_1128 IPR000182 GNAT domain smi_1128 IPR016181 Acyl-CoA N-acyltransferase smi_1128 IPR027455 Spermine/spermidine acetyltransferase, N-terminal domain smi_1129 IPR001267 Thymidine kinase smi_1129 IPR020633 Thymidine kinase, conserved site smi_1129 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1130 IPR004370 4-oxalocrotonate tautomerase smi_1130 IPR014347 Tautomerase/MIF superfamily smi_1131 IPR004520 tRNA modification GTPase MnmE smi_1131 IPR005225 Small GTP-binding protein domain smi_1131 IPR006073 GTP binding domain smi_1131 IPR018948 GTP-binding protein TrmE, N-terminal smi_1131 IPR025867 tRNA modification GTPase MnmE C-terminal domain smi_1131 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 smi_1131 IPR027368 tRNA modification GTPase MnmE domain 2 smi_1131 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1132 IPR002220 DapA-like smi_1132 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA smi_1132 IPR013785 Aldolase-type TIM barrel smi_1132 IPR020625 Dihydrodipicolinate synthetase, active site smi_1133 IPR000534 Semialdehyde dehydrogenase, NAD-binding smi_1133 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type smi_1133 IPR012080 Aspartate-semialdehyde dehydrogenase smi_1133 IPR012280 Semialdehyde dehydrogenase, dimerisation domain smi_1133 IPR016040 NAD(P)-binding domain smi_1135 IPR010387 Queuosine precursor transporter QueT smi_1136 IPR007267 GtrA-like protein smi_1137 IPR001185 Large-conductance mechanosensitive channel smi_1138 IPR001015 Ferrochelatase smi_1138 IPR019772 Ferrochelatase, active site smi_1139 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site smi_1139 IPR002933 Peptidase M20 smi_1139 IPR010161 Peptidase M20B, tripeptide aminopeptidase smi_1139 IPR011650 Peptidase M20, dimerisation domain smi_1140 IPR000477 Reverse transcriptase domain smi_1140 IPR013597 Group II intron, maturase-specific smi_1140 IPR030931 smi_1140 smi_1141 IPR006270 Streptococcal histidine triad repeat smi_1141 IPR023832 Histidine triad protein smi_1142 IPR006270 Streptococcal histidine triad repeat smi_1142 IPR023832 Histidine triad protein smi_1143 IPR006127 Periplasmic solute binding protein family smi_1143 IPR006128 Adhesion lipoprotein smi_1143 IPR006129 Adhesin B smi_1144 IPR002293 Amino acid/polyamine transporter I smi_1145 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant smi_1145 IPR012336 Thioredoxin-like fold smi_1146 IPR003834 Cytochrome c assembly protein, transmembrane domain smi_1147 IPR027806 Harbinger transposase-derived nuclease domain smi_1148 IPR027805 Transposase, Helix-turn-helix domain smi_1149 IPR003834 Cytochrome c assembly protein, transmembrane domain smi_1150 IPR000119 Histone-like bacterial DNA-binding protein smi_1150 IPR010992 Integration host factor (IHF)-like DNA-binding domain smi_1150 IPR020816 Histone-like DNA-binding protein, conserved site smi_1151 IPR003797 DegV smi_1152 IPR003740 Membrane Protein of unknown function DUF161 smi_1152 IPR019264 Domain of unknown function DUF2179 smi_1153 IPR002606 Riboflavin kinase, bacterial smi_1153 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold smi_1153 IPR015864 FAD synthetase smi_1153 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic smi_1153 IPR023465 Riboflavin kinase domain smi_1153 IPR023468 Riboflavin kinase smi_1154 IPR000994 Peptidase M24, structural domain smi_1154 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 smi_1155 IPR000524 Transcription regulator HTH, GntR smi_1155 IPR000644 CBS domain smi_1155 IPR006683 Thioesterase superfamily smi_1155 IPR010766 DRTGG smi_1155 IPR011991 Winged helix-turn-helix DNA-binding domain smi_1155 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain like smi_1155 IPR029069 HotDog domain smi_1156 IPR000182 GNAT domain smi_1156 IPR016181 Acyl-CoA N-acyltransferase smi_1157 IPR001986 Enolpyruvate transferase domain smi_1157 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase smi_1157 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta smi_1158 IPR012337 Ribonuclease H-like domain smi_1158 IPR025246 Transposase IS30-like HTH domain smi_1159 IPR000941 Enolase smi_1159 IPR020809 Enolase, conserved site smi_1159 IPR020810 Enolase, C-terminal smi_1159 IPR020811 Enolase, N-terminal smi_1159 IPR029017 Enolase N-terminal domain-like smi_1159 IPR029065 Enolase C-terminal domain-like smi_1160 IPR012543 Protein of unknown function DUF1694 smi_1160 IPR029064 50S ribosomal protein L30e-like smi_1161 IPR004381 Glycerate kinase smi_1161 IPR018193 Glycerate kinase, flavodoxin-like domain smi_1162 IPR006383 HAD-superfamily hydrolase, subfamily IB, PSPase-like smi_1162 IPR023190 Phosphoserine phosphatase, domain 2 smi_1162 IPR023214 HAD-like domain smi_1163 IPR001296 Glycosyl transferase, family 1 smi_1163 IPR011835 Glycogen/starch synthase, ADP-glucose type smi_1163 IPR013534 Starch synthase, catalytic domain smi_1164 IPR005835 Nucleotidyl transferase smi_1164 IPR011004 Trimeric LpxA-like smi_1164 IPR011832 Glucose-1-phosphate adenylyltransferase, GlgD subunit smi_1164 IPR029044 Nucleotide-diphospho-sugar transferases smi_1165 IPR005835 Nucleotidyl transferase smi_1165 IPR005836 ADP-glucose pyrophosphorylase, conserved site smi_1165 IPR011004 Trimeric LpxA-like smi_1165 IPR011831 Glucose-1-phosphate adenylyltransferase smi_1165 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial smi_1165 IPR029044 Nucleotide-diphospho-sugar transferases smi_1166 IPR004193 Glycoside hydrolase, family 13, N-terminal smi_1166 IPR006047 Glycosyl hydrolase, family 13, catalytic domain smi_1166 IPR006048 Alpha-amylase, C-terminal all beta smi_1166 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB smi_1166 IPR013780 Glycosyl hydrolase, family 13, all-beta smi_1166 IPR013781 Glycoside hydrolase, catalytic domain smi_1166 IPR013783 Immunoglobulin-like fold smi_1166 IPR014756 Immunoglobulin E-set smi_1166 IPR015902 Glycoside hydrolase, family 13 smi_1166 IPR017853 Glycoside hydrolase, superfamily smi_1167 IPR012337 Ribonuclease H-like domain smi_1167 IPR025246 Transposase IS30-like HTH domain smi_1168 IPR004193 Glycoside hydrolase, family 13, N-terminal smi_1168 IPR005323 Bacterial pullanase-associated domain smi_1168 IPR006047 Glycosyl hydrolase, family 13, catalytic domain smi_1168 IPR011840 Pullulanase, type I smi_1168 IPR013781 Glycoside hydrolase, catalytic domain smi_1168 IPR013783 Immunoglobulin-like fold smi_1168 IPR013784 Carbohydrate-binding-like fold smi_1168 IPR014756 Immunoglobulin E-set smi_1168 IPR015902 Glycoside hydrolase, family 13 smi_1168 IPR017853 Glycoside hydrolase, superfamily smi_1169 IPR001357 BRCT domain smi_1169 IPR001679 NAD-dependent DNA ligase smi_1169 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 smi_1169 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type smi_1169 IPR004150 NAD-dependent DNA ligase, OB-fold smi_1169 IPR010994 RuvA domain 2-like smi_1169 IPR012340 Nucleic acid-binding, OB-fold smi_1169 IPR013839 NAD-dependent DNA ligase, adenylation smi_1169 IPR013840 NAD-dependent DNA ligase, N-terminal smi_1169 IPR018239 NAD-dependent DNA ligase, active site smi_1169 IPR033136 smi_1169 smi_1170 IPR011701 Major facilitator superfamily smi_1170 IPR020846 Major facilitator superfamily domain smi_1171 IPR010057 Transcription activator MutR, C-terminal smi_1171 IPR010982 Lambda repressor-like, DNA-binding domain smi_1172 IPR003439 ABC transporter-like smi_1172 IPR003593 AAA+ ATPase domain smi_1172 IPR017871 ABC transporter, conserved site smi_1172 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1172 IPR032524 smi_1172 smi_1172 IPR032781 smi_1172 smi_1173 IPR005841 Alpha-D-phosphohexomutase superfamily smi_1173 IPR005843 Alpha-D-phosphohexomutase, C-terminal smi_1173 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I smi_1173 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II smi_1173 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III smi_1173 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III smi_1173 IPR016066 Alpha-D-phosphohexomutase, conserved site smi_1174 IPR005985 Bacteriocin transport accessory protein smi_1174 IPR012336 Thioredoxin-like fold smi_1175 IPR001279 Beta-lactamase-like smi_1176 IPR000014 PAS domain smi_1176 IPR003594 Histidine kinase-like ATPase, C-terminal domain smi_1176 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain smi_1176 IPR004358 Signal transduction histidine kinase-related protein, C-terminal smi_1176 IPR013767 PAS fold smi_1177 IPR001789 Signal transduction response regulator, receiver domain smi_1177 IPR001867 Signal transduction response regulator, C-terminal smi_1177 IPR011006 CheY-like superfamily smi_1177 IPR011991 Winged helix-turn-helix DNA-binding domain smi_1177 IPR016032 Signal transduction response regulator, C-terminal effector smi_1178 IPR000445 Helix-hairpin-helix motif smi_1178 IPR003265 HhH-GPD domain smi_1178 IPR005760 A/G-specific adenine glycosylase MutY smi_1178 IPR011257 DNA glycosylase smi_1178 IPR015797 NUDIX hydrolase domain-like smi_1178 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal smi_1178 IPR029119 MutY, C-terminal smi_1179 IPR002505 Phosphate acetyl/butaryl transferase smi_1179 IPR004614 Phosphate acetyltransferase smi_1179 IPR012147 Phosphate acetyl/butyryltransferase smi_1180 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F smi_1180 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site smi_1180 IPR006225 Pseudouridine synthase, RluC/RluD smi_1180 IPR020103 Pseudouridine synthase, catalytic domain smi_1181 IPR002504 Inorganic polyphosphate/ATP-NAD kinase smi_1181 IPR016064 ATP-NAD kinase-like domain smi_1181 IPR017437 ATP-NAD kinase, PpnK-type, all-beta smi_1181 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 smi_1182 IPR007685 RelA/SpoT smi_1183 IPR009195 Uncharacterised protein family YjbK smi_1183 IPR023577 CYTH-like domain smi_1183 IPR033469 smi_1183 smi_1184 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site smi_1184 IPR005946 Ribose-phosphate diphosphokinase smi_1184 IPR029057 Phosphoribosyltransferase-like smi_1184 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain smi_1185 IPR000192 Aminotransferase class V domain smi_1185 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 smi_1185 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 smi_1185 IPR015424 Pyridoxal phosphate-dependent transferase smi_1185 IPR016454 Cysteine desulfurase, NifS smi_1185 IPR020578 Aminotransferase class-V pyridoxal-phosphate binding site smi_1186 IPR014965 Putative amino acid metabolism smi_1187 IPR027879 Protein of unknown function DUF4649 smi_1188 IPR003781 CoA-binding smi_1188 IPR009718 Rex DNA-binding, C-terminal domain smi_1188 IPR011991 Winged helix-turn-helix DNA-binding domain smi_1188 IPR016040 NAD(P)-binding domain smi_1188 IPR022876 Redox-sensing transcriptional repressor Rex smi_1189 IPR011697 Peptidase C26 smi_1189 IPR029062 Class I glutamine amidotransferase-like smi_1190 IPR001405 RadC protein smi_1190 IPR010994 RuvA domain 2-like smi_1190 IPR020891 Uncharacterised protein family UPF0758, conserved site smi_1190 IPR025657 RadC-like JAB domain smi_1191 IPR000212 DNA helicase, UvrD/REP type smi_1191 IPR005751 ATP-dependent DNA helicase PcrA smi_1191 IPR013986 DExx box DNA helicase domain smi_1191 IPR014016 UvrD-like Helicase, ATP-binding domain smi_1191 IPR014017 DNA helicase, UvrD-like, C-terminal smi_1191 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1192 IPR000559 Formate-tetrahydrofolate ligase, FTHFS smi_1192 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site smi_1192 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1193 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal smi_1193 IPR011848 Phosphopantothenate--cysteine ligase smi_1194 IPR003382 Flavoprotein smi_1194 IPR011847 Phosphopantothenoylcysteine decarboxylase smi_1195 IPR024529 ECF transporter, substrate-specific component smi_1196 IPR009825 ECF transporter, substrate-specific component-like smi_1197 IPR004173 3H domain smi_1197 IPR011991 Winged helix-turn-helix DNA-binding domain smi_1197 IPR013196 Helix-turn-helix, type 11 smi_1197 IPR026043 Transcription repressor NadR smi_1198 IPR000086 NUDIX hydrolase domain smi_1198 IPR015797 NUDIX hydrolase domain-like smi_1198 IPR020476 NUDIX hydrolase smi_1199 IPR000182 GNAT domain smi_1199 IPR016181 Acyl-CoA N-acyltransferase smi_1200 IPR000182 GNAT domain smi_1200 IPR016181 Acyl-CoA N-acyltransferase smi_1201 IPR001650 Helicase, C-terminal smi_1201 IPR001943 UVR domain smi_1201 IPR004807 UvrABC system, subunit B smi_1201 IPR006935 Helicase/UvrB domain smi_1201 IPR014001 Helicase, superfamily 1/2, ATP-binding domain smi_1201 IPR024759 UvrB, YAD/RRR-motif-containing domain smi_1201 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1202 IPR003675 CAAX amino terminal protease smi_1203 IPR000515 MetI-like domain smi_1203 IPR001320 Ionotropic glutamate receptor smi_1203 IPR001638 Extracellular solute-binding protein, family 3 smi_1203 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family smi_1204 IPR003439 ABC transporter-like smi_1204 IPR003593 AAA+ ATPase domain smi_1204 IPR017871 ABC transporter, conserved site smi_1204 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1204 IPR030679 smi_1204 smi_1205 IPR001282 Glucose-6-phosphate dehydrogenase smi_1205 IPR016040 NAD(P)-binding domain smi_1205 IPR019796 Glucose-6-phosphate dehydrogenase, active site smi_1205 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding smi_1205 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal smi_1206 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain smi_1206 IPR003593 AAA+ ATPase domain smi_1206 IPR004390 Signal-recognition particle receptor FtsY smi_1206 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle smi_1206 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1207 IPR000150 Cof protein smi_1207 IPR006379 HAD-superfamily hydrolase, subfamily IIB smi_1207 IPR023214 HAD-like domain smi_1208 IPR000150 Cof protein smi_1208 IPR006379 HAD-superfamily hydrolase, subfamily IIB smi_1208 IPR023214 HAD-like domain smi_1209 IPR003395 RecF/RecN/SMC, N-terminal smi_1209 IPR010935 SMCs flexible hinge smi_1209 IPR011890 Structural maintenance of chromosomes protein, prokaryotic smi_1209 IPR024704 Structural maintenance of chromosomes protein smi_1209 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1210 IPR000999 Ribonuclease III domain smi_1210 IPR011907 Ribonuclease III smi_1210 IPR014720 Double-stranded RNA-binding domain smi_1212 IPR001093 IMP dehydrogenase/GMP reductase smi_1212 IPR005994 Guanosine monophosphate reductase, type2 smi_1212 IPR013785 Aldolase-type TIM barrel smi_1212 IPR015875 IMP dehydrogenase / GMP reductase, conserved site smi_1213 IPR006070 YrdC-like domain smi_1213 IPR017945 DHBP synthase RibB-like alpha/beta domain smi_1214 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel smi_1214 IPR004431 3-isopropylmalate dehydratase, small subunit smi_1214 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel smi_1214 IPR015937 Aconitase/isopropylmalate dehydratase smi_1215 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha smi_1215 IPR004430 3-isopropylmalate dehydratase, large subunit smi_1215 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 smi_1215 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 smi_1215 IPR015937 Aconitase/isopropylmalate dehydratase smi_1215 IPR018136 Aconitase family, 4Fe-4S cluster binding site smi_1216 IPR010718 Protein of unknown function DUF1294 smi_1216 IPR012156 Cold shock, CspA smi_1217 IPR001804 Isocitrate and isopropylmalate dehydrogenases family smi_1217 IPR004429 Isopropylmalate dehydrogenase smi_1217 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site smi_1217 IPR024084 Isopropylmalate dehydrogenase-like domain smi_1218 IPR000891 Pyruvate carboxyltransferase smi_1218 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site smi_1218 IPR005671 2-isopropylmalate synthase, bacterial-type smi_1218 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain smi_1218 IPR013785 Aldolase-type TIM barrel smi_1219 IPR007351 Uncharacterised protein YjbR smi_1220 IPR005627 Copper homeostasis protein CutC smi_1220 IPR023648 Copper homeostasis CutC domain smi_1221 IPR007401 Protein of unknown function DUF454 smi_1222 IPR000380 DNA topoisomerase, type IA smi_1222 IPR003601 DNA topoisomerase, type IA, domain 2 smi_1222 IPR003602 DNA topoisomerase, type IA, DNA-binding domain smi_1222 IPR005733 DNA topoisomerase I, bacterial-type smi_1222 IPR006171 Toprim domain smi_1222 IPR013497 DNA topoisomerase, type IA, central smi_1222 IPR013498 DNA topoisomerase, type IA, zn finger smi_1222 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 smi_1222 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 smi_1222 IPR023405 DNA topoisomerase, type IA, core domain smi_1222 IPR023406 DNA topoisomerase, type IA, active site smi_1222 IPR028612 DNA topoisomerase I, type IA smi_1223 IPR003488 DNA recombination-mediator protein A smi_1224 IPR017189 CTP:phosphocholine cytidylyltransferase smi_1224 IPR025877 MobA-like NTP transferase domain smi_1224 IPR029044 Nucleotide-diphospho-sugar transferases smi_1225 IPR000620 Drug/metabolite transporter smi_1226 IPR011009 Protein kinase-like domain smi_1227 IPR002085 Alcohol dehydrogenase superfamily, zinc-type smi_1227 IPR011032 GroES (chaperonin 10)-like smi_1227 IPR013154 Alcohol dehydrogenase GroES-like smi_1227 IPR016040 NAD(P)-binding domain smi_1228 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase smi_1228 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site smi_1228 IPR029044 Nucleotide-diphospho-sugar transferases smi_1229 IPR002797 Polysaccharide biosynthesis protein smi_1230 IPR007074 LicD smi_1231 IPR007074 LicD smi_1232 IPR001046 NRAMP family smi_1233 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain smi_1233 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain smi_1233 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain smi_1233 IPR006275 Carbamoyl-phosphate synthase, large subunit smi_1233 IPR011607 Methylglyoxal synthase-like domain smi_1233 IPR013815 ATP-grasp fold, subdomain 1 smi_1233 IPR013816 ATP-grasp fold, subdomain 2 smi_1233 IPR016185 Pre-ATP-grasp domain smi_1234 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain smi_1234 IPR006274 Carbamoyl-phosphate synthase, small subunit smi_1234 IPR017926 Glutamine amidotransferase smi_1234 IPR029062 Class I glutamine amidotransferase-like smi_1235 IPR002082 Aspartate carbamoyltransferase smi_1235 IPR006130 Aspartate/ornithine carbamoyltransferase smi_1235 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain smi_1235 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding smi_1236 IPR000836 Phosphoribosyltransferase domain smi_1236 IPR023050 Bifunctional protein PyrR smi_1236 IPR029057 Phosphoribosyltransferase-like smi_1237 IPR000445 Helix-hairpin-helix motif smi_1237 IPR003265 HhH-GPD domain smi_1237 IPR004036 Endonuclease III-like, conserved site-2 smi_1237 IPR005759 Endonuclease III smi_1237 IPR011257 DNA glycosylase smi_1237 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal smi_1238 IPR003772 Protein of unknown function DUF177 smi_1240 IPR003439 ABC transporter-like smi_1240 IPR003593 AAA+ ATPase domain smi_1240 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1241 IPR001915 Peptidase M48 smi_1241 IPR022919 Peptidase M48, protease HtpX, putative smi_1242 IPR007156 LemA smi_1242 IPR023353 LemA-like domain smi_1243 IPR003682 rRNA small subunit methyltransferase G smi_1243 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like smi_1244 IPR006042 Xanthine/uracil permease smi_1244 IPR006043 Xanthine/uracil/vitamin C permease smi_1247 IPR006935 Helicase/UvrB domain smi_1247 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1249 IPR002052 DNA methylase, N-6 adenine-specific, conserved site smi_1249 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class smi_1249 IPR002941 DNA methylase N-4/N-6 smi_1249 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like smi_1250 IPR025503 Protein of unknown function DUF4391 smi_1251 IPR000330 SNF2-related smi_1251 IPR001650 Helicase, C-terminal smi_1251 IPR014001 Helicase, superfamily 1/2, ATP-binding domain smi_1251 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1252 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain smi_1252 IPR003593 AAA+ ATPase domain smi_1252 IPR004125 Signal recognition particle, SRP54 subunit, M-domain smi_1252 IPR004780 Signal recognition particle protein Ffh smi_1252 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle smi_1252 IPR022941 Signal recognition particle, SRP54 subunit smi_1252 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1253 IPR007394 Putative helix-turn-helix protein, YlxM/p13-like smi_1253 IPR011991 Winged helix-turn-helix DNA-binding domain smi_1253 IPR013324 RNA polymerase sigma factor, region 3/4 smi_1254 IPR011038 Calycin-like smi_1254 IPR012674 Calycin smi_1254 IPR015231 Protein of unknown function DUF1934 smi_1255 IPR003607 HD/PDEase domain smi_1255 IPR006674 HD domain smi_1256 IPR000150 Cof protein smi_1256 IPR006379 HAD-superfamily hydrolase, subfamily IIB smi_1256 IPR023214 HAD-like domain smi_1257 IPR011701 Major facilitator superfamily smi_1257 IPR020846 Major facilitator superfamily domain smi_1258 IPR023577 CYTH-like domain smi_1258 IPR033469 smi_1258 smi_1259 IPR001387 Cro/C1-type helix-turn-helix domain smi_1259 IPR010982 Lambda repressor-like, DNA-binding domain smi_1259 IPR011990 Tetratricopeptide-like helical domain smi_1260 IPR002104 Integrase, catalytic smi_1260 IPR011010 DNA breaking-rejoining enzyme, catalytic core smi_1260 IPR013762 Integrase-like, catalytic core smi_1261 IPR008201 Protein of unknown function DUF86 smi_1262 IPR002934 Nucleotidyl transferase domain smi_1263 IPR007337 RelB antitoxin/Antitoxin DinJ smi_1265 IPR001857 Ribosomal protein L19 smi_1265 IPR008991 Translation protein SH3-like domain smi_1265 IPR018257 Ribosomal protein L19, conserved site smi_1266 IPR003691 Putative fluoride ion transporter CrcB smi_1267 IPR003691 Putative fluoride ion transporter CrcB smi_1268 IPR002701 Chorismate mutase smi_1268 IPR011279 Chorismate mutase, Gram-positive smi_1268 IPR020822 Chorismate mutase, type II smi_1269 IPR001094 Flavodoxin smi_1269 IPR001226 Flavodoxin, conserved site smi_1269 IPR008254 Flavodoxin/nitric oxide synthase smi_1269 IPR010087 Flavodoxin, short chain smi_1269 IPR029039 Flavoprotein-like smi_1270 IPR001667 DDH domain smi_1271 IPR002150 Ribosomal protein L31 smi_1271 IPR027493 Ribosomal protein L31 type B smi_1272 IPR007337 RelB antitoxin/Antitoxin DinJ smi_1273 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family smi_1274 IPR003369 Sec-independent protein translocase protein TatA/B/E smi_1274 IPR006312 Sec-independent protein translocase protein TatA/E smi_1275 IPR002033 Sec-independent periplasmic protein translocase TatC smi_1276 IPR004923 Iron permease FTR1/Fip1/EfeU smi_1277 IPR006313 Deferrochelatase/peroxidase EfeB smi_1277 IPR006314 Dyp-type peroxidase smi_1277 IPR011008 Dimeric alpha-beta barrel smi_1277 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal smi_1279 IPR006118 Recombinase, conserved site smi_1279 IPR006119 Resolvase, N-terminal smi_1280 IPR018337 Cell wall/choline-binding repeat smi_1283 IPR004401 Nucleoid-associated protein YbaB smi_1284 IPR004129 Glycerophosphoryl diester phosphodiesterase smi_1284 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain smi_1284 IPR018476 Glycerophosphoryl diester phosphodiesterase, membrane domain smi_1284 IPR030395 smi_1284 smi_1285 IPR012337 Ribonuclease H-like domain smi_1285 IPR013520 Exonuclease, RNase T/DNA polymerase III smi_1287 IPR007489 Domain of unknown function DUF536 smi_1287 IPR011991 Winged helix-turn-helix DNA-binding domain smi_1288 IPR000845 Nucleoside phosphorylase domain smi_1288 IPR010049 MTA/SAH nucleosidase smi_1288 IPR018017 Nucleoside phosphorylase smi_1290 IPR000086 NUDIX hydrolase domain smi_1290 IPR015797 NUDIX hydrolase domain-like smi_1291 IPR001451 Bacterial transferase hexapeptide repeat smi_1291 IPR005835 Nucleotidyl transferase smi_1291 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase smi_1291 IPR011004 Trimeric LpxA-like smi_1291 IPR018357 Hexapeptide transferase, conserved site smi_1291 IPR029044 Nucleotide-diphospho-sugar transferases smi_1292 IPR002053 Glycoside hydrolase, family 25 smi_1292 IPR013781 Glycoside hydrolase, catalytic domain smi_1292 IPR017853 Glycoside hydrolase, superfamily smi_1293 IPR007163 Protein of unknown function DUF368 smi_1294 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC smi_1294 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain smi_1295 IPR013078 Histidine phosphatase superfamily, clade-1 smi_1295 IPR029033 Histidine phosphatase superfamily smi_1296 IPR002313 Lysine-tRNA ligase, class II smi_1296 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) smi_1296 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type smi_1296 IPR012340 Nucleic acid-binding, OB-fold smi_1296 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal smi_1296 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like smi_1297 IPR001320 Ionotropic glutamate receptor smi_1297 IPR001638 Extracellular solute-binding protein, family 3 smi_1298 IPR003439 ABC transporter-like smi_1298 IPR003593 AAA+ ATPase domain smi_1298 IPR017871 ABC transporter, conserved site smi_1298 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1299 IPR000515 MetI-like domain smi_1299 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family smi_1300 IPR011990 Tetratricopeptide-like helical domain smi_1300 IPR019734 Tetratricopeptide repeat smi_1301 IPR002549 Uncharacterised protein family UPF0118 smi_1302 IPR000914 Bacterial extracellular solute-binding protein, family 5 smi_1302 IPR023765 Bacterial extracellular solute-binding protein, family 5, conserved site smi_1302 IPR030678 smi_1302 smi_1303 IPR012337 Ribonuclease H-like domain smi_1303 IPR025246 Transposase IS30-like HTH domain smi_1304 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain smi_1304 IPR015943 WD40/YVTN repeat-like-containing domain smi_1304 IPR019405 Lactonase, 7-bladed beta propeller smi_1305 IPR002560 Transposase IS204/IS1001/IS1096/IS1165 smi_1306 IPR005877 YSIRK Gram-positive signal peptide smi_1306 IPR011439 Domain of unknown function DUF1542 smi_1306 IPR019931 LPXTG cell wall anchor domain smi_1306 IPR019948 Gram-positive anchor smi_1308 IPR001469 ATPase, F1 complex, delta/epsilon subunit smi_1308 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal smi_1308 IPR020547 ATPase, F1 complex, delta/epsilon subunit, C-terminal domain smi_1309 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain smi_1309 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal smi_1309 IPR003593 AAA+ ATPase domain smi_1309 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain smi_1309 IPR005722 ATPase, F1 complex, beta subunit smi_1309 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site smi_1309 IPR024034 ATPase, F1 complex beta subunit/V1 complex, C-terminal smi_1309 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1310 IPR000131 ATPase, F1 complex, gamma subunit smi_1310 IPR023632 ATPase, F1 complex, gamma subunit conserved site smi_1310 IPR023633 ATPase, F1 complex, gamma subunit domain smi_1311 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain smi_1311 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal smi_1311 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain smi_1311 IPR005294 ATPase, F1 complex, alpha subunit smi_1311 IPR023366 ATP synthase subunit alpha-like domain smi_1311 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1312 IPR000711 ATPase, OSCP/delta subunit smi_1312 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain smi_1313 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast smi_1313 IPR005864 ATPase, F0 complex, subunit B, bacterial smi_1313 IPR028987 F-type ATP synthase subunit B-like, membrane domain smi_1314 IPR000568 ATPase, F0 complex, subunit A smi_1315 IPR000454 ATPase, F0 complex, subunit C smi_1315 IPR002379 V-ATPase proteolipid subunit C-like domain smi_1315 IPR020537 ATPase, F0 complex, subunit C, DCCD-binding site smi_1316 IPR001539 Peptidase U32 smi_1316 IPR032525 smi_1316 smi_1317 IPR009459 Protein of unknown function DUF1085 smi_1317 IPR011098 G5 domain smi_1317 IPR019931 LPXTG cell wall anchor domain smi_1317 IPR019948 Gram-positive anchor smi_1318 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1319 IPR000212 DNA helicase, UvrD/REP type smi_1319 IPR014016 UvrD-like Helicase, ATP-binding domain smi_1319 IPR014017 DNA helicase, UvrD-like, C-terminal smi_1319 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1320 IPR010365 Protein of unknown function DUF961 smi_1321 IPR010365 Protein of unknown function DUF961 smi_1322 IPR016181 Acyl-CoA N-acyltransferase smi_1322 IPR020291 DNA modification protein Mom smi_1323 IPR002543 FtsK domain smi_1323 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1324 IPR001387 Cro/C1-type helix-turn-helix domain smi_1324 IPR003491 Replication initiation factor smi_1324 IPR010982 Lambda repressor-like, DNA-binding domain smi_1326 IPR026001 Abortive infection protein-like, C-terminal domain smi_1327 IPR009899 Antirestriction smi_1329 IPR025608 TcpE family smi_1330 IPR016628 ATPase, SAG2001, predicted smi_1330 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1332 IPR000064 Endopeptidase, NLPC/P60 domain smi_1332 IPR023346 Lysozyme-like domain smi_1333 IPR024735 Conjugative transposon protein TcpC smi_1334 IPR000640 Translation elongation factor EFG, V domain smi_1334 IPR000795 Elongation factor, GTP-binding domain smi_1334 IPR005225 Small GTP-binding protein domain smi_1334 IPR005517 Translation elongation factor EFG/EF2, domain IV smi_1334 IPR009000 Translation protein, beta-barrel domain smi_1334 IPR009022 Elongation factor G, III-V domain smi_1334 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup smi_1334 IPR020568 Ribosomal protein S5 domain 2-type fold smi_1334 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1334 IPR031157 smi_1334 smi_1335 IPR025957 Cysteine-rich KTR smi_1336 IPR001387 Cro/C1-type helix-turn-helix domain smi_1336 IPR010982 Lambda repressor-like, DNA-binding domain smi_1338 IPR011991 Winged helix-turn-helix DNA-binding domain smi_1338 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 smi_1338 IPR013324 RNA polymerase sigma factor, region 3/4 smi_1339 IPR024760 Helix-turn-helix, conjugative transposon-like smi_1340 IPR021512 Protein of unknown function DUF3173 smi_1341 IPR002104 Integrase, catalytic smi_1341 IPR004107 Integrase, SAM-like, N-terminal smi_1341 IPR011010 DNA breaking-rejoining enzyme, catalytic core smi_1341 IPR013762 Integrase-like, catalytic core smi_1341 IPR023109 Integrase/recombinase, N-terminal smi_1341 IPR028259 AP2-like integrase, N-terminal domain smi_1342 IPR001674 GMP synthase, C-terminal smi_1342 IPR004739 GMP synthase, N-terminal smi_1342 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold smi_1342 IPR017926 Glutamine amidotransferase smi_1342 IPR022310 NAD/GMP synthase smi_1342 IPR022955 GMP synthase smi_1342 IPR029062 Class I glutamine amidotransferase-like smi_1343 IPR000524 Transcription regulator HTH, GntR smi_1343 IPR011663 UbiC transcription regulator-associated smi_1343 IPR011991 Winged helix-turn-helix DNA-binding domain smi_1343 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain smi_1344 IPR000620 Drug/metabolite transporter smi_1345 IPR001466 Beta-lactamase-related smi_1345 IPR012338 Beta-lactamase/transpeptidase-like smi_1346 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase smi_1346 IPR032702 smi_1346 smi_1346 IPR032703 smi_1346 smi_1347 IPR000425 Major intrinsic protein smi_1347 IPR022357 Major intrinsic protein, conserved site smi_1347 IPR023271 Aquaporin-like smi_1348 IPR018337 Cell wall/choline-binding repeat smi_1349 IPR001387 Cro/C1-type helix-turn-helix domain smi_1349 IPR010982 Lambda repressor-like, DNA-binding domain smi_1349 IPR011990 Tetratricopeptide-like helical domain smi_1350 IPR013816 ATP-grasp fold, subdomain 2 smi_1351 IPR000801 Putative esterase smi_1351 IPR029058 Alpha/Beta hydrolase fold smi_1352 IPR000801 Putative esterase smi_1352 IPR029058 Alpha/Beta hydrolase fold smi_1353 IPR003720 tRNA sulfurtransferase ThiI smi_1353 IPR004114 THUMP smi_1353 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold smi_1353 IPR020536 Thil, AANH domain smi_1354 IPR000192 Aminotransferase class V domain smi_1354 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 smi_1354 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 smi_1354 IPR015424 Pyridoxal phosphate-dependent transferase smi_1354 IPR016454 Cysteine desulfurase, NifS smi_1354 IPR020578 Aminotransferase class-V pyridoxal-phosphate binding site smi_1356 IPR002543 FtsK domain smi_1356 IPR003593 AAA+ ATPase domain smi_1356 IPR011991 Winged helix-turn-helix DNA-binding domain smi_1356 IPR018541 FtsK gamma domain smi_1356 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1357 IPR002178 PTS EIIA type-2 domain smi_1357 IPR003352 Phosphotransferase system, EIIC smi_1357 IPR003353 Phosphotransferase system, fructose-specific IIB subunit smi_1357 IPR003501 Phosphotransferase system, EIIB component, type 2/3 smi_1357 IPR004715 Phosphotransferase system, IIA component fructose subfamily smi_1357 IPR006327 Phosphotransferase system, fructose IIC component smi_1357 IPR016152 Phosphotransferase/anion transporter smi_1358 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site smi_1358 IPR011611 Carbohydrate kinase PfkB smi_1358 IPR017583 Tagatose/fructose phosphokinase smi_1358 IPR022463 Fructose 1-phosphate kinase smi_1358 IPR023314 Tagatose-6-phosphate kinase/1-phosphofructokinase N-terminal domain smi_1358 IPR029056 Ribokinase-like smi_1359 IPR001034 HTH DeoR N-terminal domain smi_1359 IPR011991 Winged helix-turn-helix DNA-binding domain smi_1359 IPR014036 DeoR C-terminal sensor domain smi_1359 IPR018356 Transcription regulator, HTH DeoR-type, conserved site smi_1361 IPR002559 Transposase, IS4-like smi_1361 IPR008490 Transposase InsH, N-terminal smi_1364 IPR009057 Homeodomain-like smi_1365 IPR001584 Integrase, catalytic core smi_1365 IPR012337 Ribonuclease H-like domain smi_1365 IPR025948 HTH-like domain smi_1367 IPR001387 Cro/C1-type helix-turn-helix domain smi_1367 IPR010982 Lambda repressor-like, DNA-binding domain smi_1367 IPR015927 Peptidase S24/S26A/S26B/S26C smi_1367 IPR019759 Peptidase S24/S26A/S26B smi_1367 IPR028360 Peptidase S24/S26, beta-ribbon domain smi_1369 IPR003477 mRNA interferase PemK-like protein smi_1369 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor smi_1371 IPR007237 CD20-like smi_1374 IPR013830 smi_1374 smi_1375 IPR000150 Cof protein smi_1375 IPR006379 HAD-superfamily hydrolase, subfamily IIB smi_1375 IPR023214 HAD-like domain smi_1376 IPR019079 Capsule synthesis protein, CapA smi_1376 IPR029052 Metallo-dependent phosphatase-like smi_1377 IPR000181 Formylmethionine deformylase smi_1377 IPR023635 Peptide deformylase smi_1378 IPR001537 tRNA/rRNA methyltransferase, SpoU type smi_1378 IPR004441 RNA methyltransferase TrmH family smi_1378 IPR013123 RNA 2-O ribose methyltransferase, substrate binding smi_1378 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal smi_1378 IPR029028 Alpha/beta knot methyltransferases smi_1378 IPR029064 50S ribosomal protein L30e-like smi_1379 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II smi_1379 IPR005982 Thioredoxin reductase smi_1379 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site smi_1379 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain smi_1380 IPR025134 Protein of unknown function DUF4059 smi_1381 IPR003439 ABC transporter-like smi_1381 IPR003593 AAA+ ATPase domain smi_1381 IPR017871 ABC transporter, conserved site smi_1381 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1381 IPR030679 smi_1381 smi_1382 IPR000515 MetI-like domain smi_1382 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family smi_1383 IPR006504 Transcriptional regulator Spx/MgsR smi_1383 IPR006660 Arsenate reductase-like smi_1383 IPR012336 Thioredoxin-like fold smi_1384 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site smi_1384 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain smi_1384 IPR011991 Winged helix-turn-helix DNA-binding domain smi_1384 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding smi_1385 IPR000182 GNAT domain smi_1385 IPR016181 Acyl-CoA N-acyltransferase smi_1386 IPR014975 Protein of unknown function DUF1836 smi_1387 IPR004254 Hly-III-related smi_1387 IPR005744 HylII smi_1388 IPR002161 PdxT/SNO family smi_1388 IPR021196 PdxT/SNO family, conserved site smi_1388 IPR029062 Class I glutamine amidotransferase-like smi_1389 IPR001852 Pyridoxine biosynthesis protein smi_1389 IPR011060 Ribulose-phosphate binding barrel smi_1389 IPR013785 Aldolase-type TIM barrel smi_1390 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain smi_1390 IPR016156 FAD/NAD-linked reductase, dimerisation domain smi_1390 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain smi_1391 IPR003374 ApbE-like domain smi_1391 IPR024932 Flavin transferase ApbE smi_1392 IPR005025 NADPH-dependent FMN reductase-like smi_1392 IPR029039 Flavoprotein-like smi_1393 IPR005025 NADPH-dependent FMN reductase-like smi_1393 IPR029039 Flavoprotein-like smi_1394 IPR009242 Protein of unknown function DUF896 smi_1394 IPR023218 UPF0291 structural domain smi_1395 IPR006674 HD domain smi_1395 IPR015944 Glycine-tRNA ligase, beta subunit smi_1396 IPR002310 Glycine-tRNA ligase, alpha subunit smi_1398 IPR000209 Peptidase S8/S53 domain smi_1398 IPR003137 Protease-associated domain, PA smi_1398 IPR010435 Peptidase S8A, DUF1034 C-terminal smi_1398 IPR015500 Peptidase S8, subtilisin-related smi_1398 IPR022398 Peptidase S8, subtilisin, His-active site smi_1398 IPR023827 Peptidase S8, subtilisin, Asp-active site smi_1398 IPR023828 Peptidase S8, subtilisin, Ser-active site smi_1399 IPR002509 Polysaccharide deacetylase smi_1399 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel smi_1399 IPR017219 Peptidoglycan GlcNAc deacetylase smi_1400 IPR002133 S-adenosylmethionine synthetase smi_1400 IPR022628 S-adenosylmethionine synthetase, N-terminal smi_1400 IPR022629 S-adenosylmethionine synthetase, central domain smi_1400 IPR022630 S-adenosylmethionine synthetase, C-terminal smi_1400 IPR022631 S-adenosylmethionine synthetase, conserved site smi_1400 IPR022636 S-adenosylmethionine synthetase superfamily smi_1402 IPR001650 Helicase, C-terminal smi_1402 IPR011545 DEAD/DEAH box helicase domain smi_1402 IPR014001 Helicase, superfamily 1/2, ATP-binding domain smi_1402 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1402 IPR030881 smi_1402 smi_1403 IPR005135 Endonuclease/exonuclease/phosphatase smi_1404 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 smi_1404 IPR001996 Phosphotransferase system, IIB component, type 1 smi_1404 IPR003352 Phosphotransferase system, EIIC smi_1404 IPR011055 Duplicated hybrid motif smi_1404 IPR011300 Phosphotransferase system, IIBC component smi_1404 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site smi_1405 IPR012337 Ribonuclease H-like domain smi_1405 IPR025246 Transposase IS30-like HTH domain smi_1406 IPR003838 Permease FtsX-like smi_1406 IPR004513 ABC transporter, cell division protein FtsX smi_1407 IPR003439 ABC transporter-like smi_1407 IPR003593 AAA+ ATPase domain smi_1407 IPR005286 Cell division protein FtsE, ATP-binding smi_1407 IPR017871 ABC transporter, conserved site smi_1407 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1408 IPR000352 Peptide chain release factor class I/class II smi_1408 IPR004374 Peptide chain release factor 2 smi_1408 IPR005139 Peptide chain release factor smi_1408 IPR014720 Double-stranded RNA-binding domain smi_1409 IPR012337 Ribonuclease H-like domain smi_1409 IPR025246 Transposase IS30-like HTH domain smi_1410 IPR000644 CBS domain smi_1411 IPR003439 ABC transporter-like smi_1411 IPR003593 AAA+ ATPase domain smi_1411 IPR017871 ABC transporter, conserved site smi_1411 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1411 IPR030660 smi_1411 smi_1412 IPR003439 ABC transporter-like smi_1412 IPR003593 AAA+ ATPase domain smi_1412 IPR017871 ABC transporter, conserved site smi_1412 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1412 IPR032823 smi_1412 smi_1413 IPR001851 ABC transporter, permease smi_1414 IPR001851 ABC transporter, permease smi_1414 IPR029022 ABC transporter, BtuC-like smi_1415 IPR000709 Leu/Ile/Val-binding protein smi_1415 IPR028081 Leucine-binding protein domain smi_1415 IPR028082 Periplasmic binding protein-like I smi_1416 IPR016979 Protein of unknown function DUF2129 smi_1417 IPR001907 ATP-dependent Clp protease proteolytic subunit smi_1417 IPR018215 ClpP, active site smi_1417 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA smi_1417 IPR029045 ClpP/crotonase-like domain smi_1417 IPR033135 smi_1417 smi_1418 IPR005765 Uracil phosphoribosyl transferase smi_1418 IPR029057 Phosphoribosyltransferase-like smi_1419 IPR012337 Ribonuclease H-like domain smi_1419 IPR025246 Transposase IS30-like HTH domain smi_1420 IPR002125 CMP/dCMP deaminase, zinc-binding smi_1420 IPR015517 Deoxycytidylate deaminase-related smi_1420 IPR016192 APOBEC/CMP deaminase, zinc-binding smi_1420 IPR016193 Cytidine deaminase-like smi_1420 IPR016473 Deoxycytidylate deaminase smi_1421 IPR001647 DNA-binding HTH domain, TetR-type smi_1421 IPR009057 Homeodomain-like smi_1421 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal smi_1422 IPR003797 DegV smi_1423 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like smi_1423 IPR023166 HI0933 insert-like domain smi_1423 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain smi_1424 IPR012545 Protein of unknown function DUF1697 smi_1425 IPR000551 MerR-type HTH domain smi_1425 IPR009061 DNA binding domain, putative smi_1425 IPR012925 TipAS antibiotic-recognition domain smi_1426 IPR000175 Sodium:neurotransmitter symporter smi_1427 IPR001250 Mannose-6-phosphate isomerase, type I smi_1427 IPR011051 RmlC-like cupin domain smi_1427 IPR014628 Mannose-6-phosphate isomerase, Firmicutes type, short form smi_1427 IPR014710 RmlC-like jelly roll fold smi_1428 IPR004316 smi_1428 smi_1429 IPR003439 ABC transporter-like smi_1429 IPR003593 AAA+ ATPase domain smi_1429 IPR011527 ABC transporter type 1, transmembrane domain smi_1429 IPR017871 ABC transporter, conserved site smi_1429 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1430 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase smi_1431 IPR000399 TPP-binding enzyme, conserved site smi_1431 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding smi_1431 IPR012000 Thiamine pyrophosphate enzyme, central domain smi_1431 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain smi_1431 IPR014092 Pyruvate oxidase smi_1431 IPR029035 DHS-like NAD/FAD-binding domain smi_1431 IPR029061 Thiamin diphosphate-binding fold smi_1432 IPR001757 Cation-transporting P-type ATPase smi_1432 IPR008250 P-type ATPase, A domain smi_1432 IPR008972 Cupredoxin smi_1432 IPR018303 P-type ATPase, phosphorylation site smi_1432 IPR023214 HAD-like domain smi_1432 IPR023299 P-type ATPase, cytoplasmic domain N smi_1432 IPR027256 Cation-transporting P-type ATPase, subfamily IB smi_1432 IPR028096 EfeO-type cupredoxin-like domain smi_1433 IPR008972 Cupredoxin smi_1433 IPR028096 EfeO-type cupredoxin-like domain smi_1434 IPR005650 BlaI transcriptional regulatory family smi_1434 IPR011991 Winged helix-turn-helix DNA-binding domain smi_1434 IPR014071 Copper transport repressor CopY/TcrY smi_1435 IPR000262 FMN-dependent dehydrogenase smi_1435 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent smi_1435 IPR013785 Aldolase-type TIM barrel smi_1436 IPR000515 MetI-like domain smi_1436 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family smi_1437 IPR000515 MetI-like domain smi_1437 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family smi_1438 IPR003439 ABC transporter-like smi_1438 IPR003593 AAA+ ATPase domain smi_1438 IPR017871 ABC transporter, conserved site smi_1438 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1438 IPR030679 smi_1438 smi_1439 IPR001638 Extracellular solute-binding protein, family 3 smi_1439 IPR018313 Extracellular solute-binding protein, family 3, conserved site smi_1440 IPR003439 ABC transporter-like smi_1440 IPR003593 AAA+ ATPase domain smi_1440 IPR017871 ABC transporter, conserved site smi_1440 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1445 IPR000836 Phosphoribosyltransferase domain smi_1445 IPR004467 Orotate phosphoribosyl transferase domain smi_1445 IPR023031 Orotate phosphoribosyltransferase smi_1445 IPR029057 Phosphoribosyltransferase-like smi_1446 IPR001754 Orotidine 5'-phosphate decarboxylase domain smi_1446 IPR011060 Ribulose-phosphate binding barrel smi_1446 IPR013785 Aldolase-type TIM barrel smi_1446 IPR014732 Orotidine 5'-phosphate decarboxylase smi_1446 IPR018089 Orotidine 5'-phosphate decarboxylase, active site smi_1447 IPR005548 Cell division protein FtsQ/DivIB smi_1447 IPR013685 Polypeptide-transport-associated, FtsQ-type smi_1447 IPR026580 Cell division protein DivIB smi_1448 IPR004276 Glycosyl transferase, family 28 smi_1448 IPR006009 N-acetylglucosaminyltransferase, MurG smi_1448 IPR007235 Glycosyl transferase, family 28, C-terminal smi_1449 IPR004101 Mur ligase, C-terminal smi_1449 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase smi_1449 IPR013221 Mur ligase, central smi_1449 IPR016040 NAD(P)-binding domain smi_1450 IPR003439 ABC transporter-like smi_1450 IPR003593 AAA+ ATPase domain smi_1450 IPR017871 ABC transporter, conserved site smi_1450 IPR019895 Putative bacteriocin export ABC transporter, lactococcin 972 group smi_1450 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1451 IPR006541 Bacteriocin-associated integral membrane protein smi_1451 IPR016976 Uncharacterised conserved protein UCP031601 smi_1452 IPR002560 Transposase IS204/IS1001/IS1096/IS1165 smi_1452 IPR009057 Homeodomain-like smi_1452 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger smi_1452 IPR032877 smi_1452 smi_1453 IPR000640 Translation elongation factor EFG, V domain smi_1453 IPR000795 Elongation factor, GTP-binding domain smi_1453 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 smi_1453 IPR005225 Small GTP-binding protein domain smi_1453 IPR006298 GTP-binding protein TypA smi_1453 IPR009000 Translation protein, beta-barrel domain smi_1453 IPR009022 Elongation factor G, III-V domain smi_1453 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1453 IPR031157 smi_1453 smi_1454 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F smi_1454 IPR002942 RNA-binding S4 domain smi_1454 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F smi_1454 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site smi_1454 IPR020103 Pseudouridine synthase, catalytic domain smi_1455 IPR001763 Rhodanese-like domain smi_1456 IPR009256 Protein of unknown function DUF910 smi_1456 IPR023164 YqgQ-like domain smi_1457 IPR000792 Transcription regulator LuxR, C-terminal smi_1457 IPR001789 Signal transduction response regulator, receiver domain smi_1457 IPR011006 CheY-like superfamily smi_1457 IPR011991 Winged helix-turn-helix DNA-binding domain smi_1457 IPR016032 Signal transduction response regulator, C-terminal effector smi_1458 IPR003594 Histidine kinase-like ATPase, C-terminal domain smi_1459 IPR003838 Permease FtsX-like smi_1459 IPR027022 ABC transporter permease protein, BceB-type smi_1460 IPR003439 ABC transporter-like smi_1460 IPR003593 AAA+ ATPase domain smi_1460 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1461 IPR000847 Transcription regulator HTH, LysR smi_1461 IPR005119 LysR, substrate-binding smi_1461 IPR011991 Winged helix-turn-helix DNA-binding domain smi_1463 IPR000641 CbxX/CfqX smi_1463 IPR003593 AAA+ ATPase domain smi_1463 IPR003959 ATPase, AAA-type, core smi_1463 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1466 IPR020961 Domain of unknown function DUF3642, lipoprotein smi_1466 IPR027279 D-aminopeptidase/lipoprotein domain smi_1468 IPR012317 Poly(ADP-ribose) polymerase, catalytic domain smi_1468 IPR025051 Protein of unknown function DUF3990 smi_1470 IPR001387 Cro/C1-type helix-turn-helix domain smi_1470 IPR010982 Lambda repressor-like, DNA-binding domain smi_1471 IPR002347 Glucose/ribitol dehydrogenase smi_1471 IPR016040 NAD(P)-binding domain smi_1471 IPR020904 Short-chain dehydrogenase/reductase, conserved site smi_1472 IPR001279 Beta-lactamase-like smi_1472 IPR013471 Ribonuclease Z/BN smi_1474 IPR005225 Small GTP-binding protein domain smi_1474 IPR006073 GTP binding domain smi_1474 IPR016496 GTPase HflX smi_1474 IPR025121 GTPase HflX N-terminal domain smi_1474 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1474 IPR032305 smi_1474 smi_1475 IPR018022 tRNA delta(2)-isopentenylpyrophosphate transferase smi_1475 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1476 IPR021402 Protein of unknown function DUF3042 smi_1477 IPR000398 Thymidylate synthase smi_1477 IPR020940 Thymidylate synthase, active site smi_1477 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain smi_1478 IPR000600 ROK smi_1478 IPR004654 Glucokinase ROK smi_1479 IPR008613 Excalibur calcium-binding domain smi_1479 IPR018337 Cell wall/choline-binding repeat smi_1480 IPR000073 Alpha/beta hydrolase fold-1 smi_1480 IPR029058 Alpha/Beta hydrolase fold smi_1481 IPR001544 Aminotransferase, class IV smi_1481 IPR005801 ADC synthase smi_1481 IPR005802 Para-aminobenzoate synthase, component I smi_1481 IPR015890 Chorismate binding, C-terminal smi_1481 IPR019999 Anthranilate synthase component I - like smi_1482 IPR005877 YSIRK Gram-positive signal peptide smi_1482 IPR008006 Peptidase M26, N-terminal domain smi_1482 IPR011098 G5 domain smi_1482 IPR011505 Peptidase M26, C-terminal domain smi_1483 IPR006340 Protein of unknown function DUF436 smi_1484 IPR003594 Histidine kinase-like ATPase, C-terminal domain smi_1484 IPR003660 HAMP linker domain smi_1484 IPR010559 Signal transduction histidine kinase, internal region smi_1484 IPR033479 smi_1484 smi_1485 IPR001789 Signal transduction response regulator, receiver domain smi_1485 IPR009057 Homeodomain-like smi_1485 IPR011006 CheY-like superfamily smi_1485 IPR018060 DNA binding HTH domain, AraC-type smi_1485 IPR018062 HTH domain AraC-type, conserved site smi_1485 IPR020449 Transcription regulator HTH, AraC- type smi_1486 IPR002569 Peptide methionine sulphoxide reductase MsrA smi_1486 IPR002579 Peptide methionine sulphoxide reductase MrsB smi_1486 IPR011057 Mss4-like smi_1486 IPR028427 Peptide methionine sulfoxide reductase smi_1487 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant smi_1487 IPR012336 Thioredoxin-like fold smi_1488 IPR003834 Cytochrome c assembly protein, transmembrane domain smi_1489 IPR010106 Conserved hypothetical protein CHP01784 smi_1490 IPR000182 GNAT domain smi_1490 IPR016181 Acyl-CoA N-acyltransferase smi_1491 IPR003694 NAD(+) synthetase smi_1491 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold smi_1491 IPR022310 NAD/GMP synthase smi_1491 IPR022926 NH(3)-dependent NAD(+) synthetase smi_1492 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal smi_1492 IPR006405 Nicotinate phosphoribosyltransferase pncB type smi_1492 IPR007229 Nicotinate phosphoribosyltransferase family smi_1494 IPR001387 Cro/C1-type helix-turn-helix domain smi_1494 IPR010982 Lambda repressor-like, DNA-binding domain smi_1496 IPR000182 GNAT domain smi_1496 IPR016181 Acyl-CoA N-acyltransferase smi_1497 IPR002293 Amino acid/polyamine transporter I smi_1497 IPR004840 Amino acid permease, conserved site smi_1497 IPR004841 Amino acid permease/ SLC12A domain smi_1498 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal smi_1498 IPR006359 Transcription elongation factor GreA smi_1498 IPR018151 Transcription elongation factor, GreA/GreB, conserved site smi_1498 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal smi_1498 IPR023459 Transcription elongation factor GreA/GreB family smi_1498 IPR028624 Transcription elongation factor GreA/GreB smi_1499 IPR003770 Uncharacterised protein family UPF0755, YceG-like smi_1499 IPR013087 Zinc finger C2H2-type/integrase DNA-binding domain smi_1500 IPR000182 GNAT domain smi_1500 IPR016181 Acyl-CoA N-acyltransferase smi_1501 IPR000182 GNAT domain smi_1501 IPR016181 Acyl-CoA N-acyltransferase smi_1502 IPR000713 Mur ligase, N-terminal smi_1502 IPR004101 Mur ligase, C-terminal smi_1502 IPR005758 UDP-N-acetylmuramate-alanine ligase smi_1502 IPR013221 Mur ligase, central smi_1502 IPR016040 NAD(P)-binding domain smi_1504 IPR000330 SNF2-related smi_1504 IPR001650 Helicase, C-terminal smi_1504 IPR013663 Helicase, SWF/SNF/SWI type, bacterial smi_1504 IPR014001 Helicase, superfamily 1/2, ATP-binding domain smi_1504 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1506 IPR011664 Abortive infection system protein AbiD/AbiF-like smi_1507 IPR004839 Aminotransferase, class I/classII smi_1507 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 smi_1507 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 smi_1507 IPR015424 Pyridoxal phosphate-dependent transferase smi_1507 IPR027619 Putative C-S lyase smi_1508 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme smi_1508 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 smi_1508 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 smi_1508 IPR015424 Pyridoxal phosphate-dependent transferase smi_1510 IPR000914 Bacterial extracellular solute-binding protein, family 5 smi_1510 IPR023765 Bacterial extracellular solute-binding protein, family 5, conserved site smi_1511 IPR002797 Polysaccharide biosynthesis protein smi_1511 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain smi_1512 IPR000713 Mur ligase, N-terminal smi_1512 IPR004101 Mur ligase, C-terminal smi_1512 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase smi_1512 IPR013221 Mur ligase, central smi_1513 IPR008462 CsbD-like smi_1514 IPR014924 Protein of unknown function DUF1803 smi_1515 IPR024453 smi_1515 smi_1516 IPR001667 DDH domain smi_1516 IPR004097 DHHA2 domain smi_1516 IPR022934 Manganese-dependent inorganic pyrophosphatase, probable smi_1517 IPR000305 GIY-YIG nuclease superfamily smi_1518 IPR002052 DNA methylase, N-6 adenine-specific, conserved site smi_1518 IPR007848 Methyltransferase small domain smi_1518 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like smi_1519 IPR003029 Ribosomal protein S1, RNA-binding domain smi_1519 IPR012340 Nucleic acid-binding, OB-fold smi_1519 IPR022967 RNA-binding domain, S1 smi_1520 IPR000150 Cof protein smi_1520 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain smi_1520 IPR006379 HAD-superfamily hydrolase, subfamily IIB smi_1520 IPR023214 HAD-like domain smi_1520 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase smi_1520 IPR029000 Cyclophilin-like domain smi_1521 IPR001648 Ribosomal protein S18 smi_1521 IPR018275 Ribosomal protein S18, conserved site smi_1522 IPR000424 Primosome PriB/single-strand DNA-binding smi_1522 IPR011344 Single-stranded DNA-binding protein smi_1522 IPR012340 Nucleic acid-binding, OB-fold smi_1523 IPR000529 Ribosomal protein S6 smi_1523 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 smi_1523 IPR020814 Ribosomal protein S6, plastid/chloroplast smi_1524 IPR012337 Ribonuclease H-like domain smi_1524 IPR025246 Transposase IS30-like HTH domain smi_1525 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb smi_1525 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) smi_1525 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type smi_1525 IPR004522 Asparagine-tRNA ligase smi_1525 IPR012340 Nucleic acid-binding, OB-fold smi_1525 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like smi_1526 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain smi_1526 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase smi_1527 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site smi_1527 IPR004839 Aminotransferase, class I/classII smi_1527 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 smi_1527 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 smi_1527 IPR015424 Pyridoxal phosphate-dependent transferase smi_1529 IPR011701 Major facilitator superfamily smi_1529 IPR020846 Major facilitator superfamily domain smi_1530 IPR005025 NADPH-dependent FMN reductase-like smi_1530 IPR029039 Flavoprotein-like smi_1531 IPR005877 YSIRK Gram-positive signal peptide smi_1531 IPR008160 Collagen triple helix repeat smi_1531 IPR011098 G5 domain smi_1531 IPR019931 LPXTG cell wall anchor domain smi_1531 IPR026394 Streptococcal surface-anchored protein repeat, S. criceti family smi_1532 IPR007737 Mga helix-turn-helix domain smi_1532 IPR011991 Winged helix-turn-helix DNA-binding domain smi_1532 IPR013199 Helix-turn-helix Mga, DNA-binding trans-acting positive regulator smi_1532 IPR013236 M protein trans-acting positive regulator (MGA), PRD domain smi_1533 IPR005583 Uncharacterised protein family UPF0246 smi_1534 IPR003344 Bacterial Ig-like, group 1 smi_1534 IPR005877 YSIRK Gram-positive signal peptide smi_1534 IPR006101 Glycoside hydrolase, family 2 smi_1534 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich smi_1534 IPR006103 Glycoside hydrolase, family 2, TIM barrel smi_1534 IPR006104 Glycosyl hydrolases family 2, sugar binding domain smi_1534 IPR008979 Galactose-binding domain-like smi_1534 IPR011081 Bacterial Ig-related smi_1534 IPR011098 G5 domain smi_1534 IPR013781 Glycoside hydrolase, catalytic domain smi_1534 IPR013812 Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain smi_1534 IPR017853 Glycoside hydrolase, superfamily smi_1534 IPR019931 LPXTG cell wall anchor domain smi_1534 IPR032311 smi_1534 smi_1535 IPR002560 Transposase IS204/IS1001/IS1096/IS1165 smi_1535 IPR009057 Homeodomain-like smi_1535 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger smi_1535 IPR032877 smi_1535 smi_1536 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal smi_1536 IPR003346 Transposase, IS116/IS110/IS902 smi_1537 IPR000421 Coagulation factor 5/8 C-terminal type domain smi_1537 IPR005877 YSIRK Gram-positive signal peptide smi_1537 IPR008979 Galactose-binding domain-like smi_1537 IPR011496 Beta-N-acetylglucosaminidase smi_1537 IPR013320 Concanavalin A-like lectin/glucanase, subgroup smi_1537 IPR013781 Glycoside hydrolase, catalytic domain smi_1537 IPR015882 Beta-hexosaminidase, bacteial type, N-terminal smi_1537 IPR015883 Glycoside hydrolase family 20, catalytic core smi_1537 IPR017853 Glycoside hydrolase, superfamily smi_1537 IPR019931 LPXTG cell wall anchor domain smi_1537 IPR025705 Beta-hexosaminidase smi_1537 IPR029018 Chitobiase/beta-hexosaminidase domain 2-like smi_1538 IPR000421 Coagulation factor 5/8 C-terminal type domain smi_1538 IPR005877 YSIRK Gram-positive signal peptide smi_1538 IPR008256 Peptidase S1B smi_1538 IPR008353 Peptidase S1B, exfoliative toxin smi_1538 IPR008979 Galactose-binding domain-like smi_1538 IPR009003 Trypsin-like cysteine/serine peptidase domain smi_1538 IPR019931 LPXTG cell wall anchor domain smi_1538 IPR025706 Endo-alpha-N-acetylgalactosaminidase smi_1539 IPR005583 Uncharacterised protein family UPF0246 smi_1540 IPR025018 Protein of unknown function DUF3953 smi_1542 IPR000181 Formylmethionine deformylase smi_1542 IPR023635 Peptide deformylase smi_1543 IPR001757 Cation-transporting P-type ATPase smi_1543 IPR004014 Cation-transporting P-type ATPase, N-terminal smi_1543 IPR006068 Cation-transporting P-type ATPase, C-terminal smi_1543 IPR008250 P-type ATPase, A domain smi_1543 IPR018303 P-type ATPase, phosphorylation site smi_1543 IPR023214 HAD-like domain smi_1543 IPR023298 P-type ATPase, transmembrane domain smi_1543 IPR023299 P-type ATPase, cytoplasmic domain N smi_1544 IPR002524 Cation efflux protein smi_1544 IPR027469 Cation efflux protein transmembrane domain smi_1544 IPR027470 Cation efflux protein cytoplasmic domain smi_1544 IPR032710 smi_1544 smi_1545 IPR003439 ABC transporter-like smi_1545 IPR003593 AAA+ ATPase domain smi_1545 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1545 IPR032524 smi_1545 smi_1545 IPR032781 smi_1545 smi_1546 IPR002646 Poly A polymerase, head domain smi_1546 IPR023068 CCA-adding enzyme, firmicutes smi_1546 IPR032810 smi_1546 smi_1546 IPR032828 smi_1546 smi_1547 IPR000846 Dihydrodipicolinate reductase, N-terminal smi_1547 IPR016040 NAD(P)-binding domain smi_1547 IPR022663 Dihydrodipicolinate reductase, C-terminal smi_1547 IPR022664 Dihydrodipicolinate reductase, conserved site smi_1547 IPR023940 Dihydrodipicolinate reductase, bacterial smi_1548 IPR003797 DegV smi_1549 IPR003708 Bacterial protein export chaperone SecB smi_1549 IPR009530 Protein of unknown function DUF1149 smi_1550 IPR005841 Alpha-D-phosphohexomutase superfamily smi_1550 IPR005843 Alpha-D-phosphohexomutase, C-terminal smi_1550 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I smi_1550 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II smi_1550 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III smi_1550 IPR006352 Phosphoglucosamine mutase smi_1550 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III smi_1550 IPR016066 Alpha-D-phosphohexomutase, conserved site smi_1551 IPR012505 YbbR-like smi_1552 IPR003390 DNA integrity scanning protein, DisA, N-terminal smi_1552 IPR014046 Diadenylate cyclase-like smi_1553 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II smi_1553 IPR022890 Ferredoxin--NADP reductase, type 2 smi_1553 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain smi_1554 IPR003802 Sporulation regulator WhiA smi_1554 IPR018478 Sporulation transcription regulator WhiA, N-terminal domain smi_1554 IPR023054 Sporulation regulator WhiA, C-terminal smi_1554 IPR027434 Homing endonuclease smi_1555 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 smi_1555 IPR010119 Gluconeogenesis factor smi_1556 IPR005337 ATPase, P-loop-containing smi_1556 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1557 IPR006056 Enamine/imine deaminase YjgF-like smi_1557 IPR006175 YjgF/Yer057p/UK114 family smi_1557 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like smi_1557 IPR019897 YjgF-like protein, conserved site smi_1558 IPR006073 GTP binding domain smi_1558 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC smi_1558 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1559 IPR003593 AAA+ ATPase domain smi_1559 IPR003959 ATPase, AAA-type, core smi_1559 IPR004487 Clp protease, ATP-binding subunit ClpX smi_1559 IPR010603 Zinc finger, ClpX C4-type smi_1559 IPR019489 Clp ATPase, C-terminal smi_1559 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1561 IPR001796 Dihydrofolate reductase domain smi_1561 IPR012259 Dihydrofolate reductase smi_1561 IPR017925 Dihydrofolate reductase conserved site smi_1561 IPR024072 Dihydrofolate reductase-like domain smi_1562 IPR002177 DNA-binding protein Dps smi_1562 IPR008331 Ferritin/DPS protein domain smi_1562 IPR009078 Ferritin-like superfamily smi_1562 IPR012347 Ferritin-related smi_1563 IPR002053 Glycoside hydrolase, family 25 smi_1563 IPR013781 Glycoside hydrolase, catalytic domain smi_1563 IPR017853 Glycoside hydrolase, superfamily smi_1563 IPR018337 Cell wall/choline-binding repeat smi_1564 IPR000652 Triosephosphate isomerase smi_1564 IPR013785 Aldolase-type TIM barrel smi_1564 IPR020861 Triosephosphate isomerase, active site smi_1564 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic smi_1565 IPR006343 Replication protein, DnaD/DnaB domain smi_1565 IPR011991 Winged helix-turn-helix DNA-binding domain smi_1566 IPR005697 Homoserine O-succinyltransferase smi_1566 IPR029062 Class I glutamine amidotransferase-like smi_1567 IPR000836 Phosphoribosyltransferase domain smi_1567 IPR005764 Adenine phosphoribosyl transferase smi_1567 IPR029057 Phosphoribosyltransferase-like smi_1568 IPR025714 Methyltransferase domain smi_1568 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like smi_1569 IPR002143 Ribosomal protein L1 smi_1569 IPR005878 Ribosomal protein L1, bacterial-type smi_1569 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich smi_1569 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich smi_1569 IPR023673 Ribosomal protein L1, conserved site smi_1569 IPR023674 Ribosomal protein L1-like smi_1569 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein smi_1570 IPR000911 Ribosomal protein L11/L12 smi_1570 IPR006519 Ribosomal protein L11, bacterial-type smi_1570 IPR020783 Ribosomal protein L11, C-terminal smi_1570 IPR020784 Ribosomal protein L11, N-terminal smi_1570 IPR020785 Ribosomal protein L11, conserved site smi_1571 IPR003709 Peptidase M15B/M15C smi_1571 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain smi_1572 IPR001310 Histidine triad (HIT) protein smi_1572 IPR011146 HIT-like domain smi_1573 IPR008007 Peptidase M42 smi_1573 IPR023367 Peptidase M42, domain 2 smi_1574 IPR004685 Branched-chain amino acid transport system II carrier protein smi_1575 IPR001763 Rhodanese-like domain smi_1576 IPR005122 Uracil-DNA glycosylase-like smi_1577 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site smi_1577 IPR002933 Peptidase M20 smi_1577 IPR010964 Peptidase M20A, peptidase V-related smi_1577 IPR011291 Peptidase M20A, peptidase V smi_1577 IPR011650 Peptidase M20, dimerisation domain smi_1578 IPR000415 Nitroreductase-like smi_1578 IPR029479 Nitroreductase smi_1579 IPR001638 Extracellular solute-binding protein, family 3 smi_1580 IPR000979 Phosphodiesterase MJ0936/Vps29 smi_1580 IPR011152 Phosphoesterase MJ0912 smi_1580 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type smi_1580 IPR029052 Metallo-dependent phosphatase-like smi_1581 IPR000305 GIY-YIG nuclease superfamily smi_1581 IPR001162 UvrC family homology region smi_1581 IPR001943 UVR domain smi_1581 IPR004791 UvrABC system, subunit C smi_1581 IPR010994 RuvA domain 2-like smi_1581 IPR027299 GIY-YIG domain smi_1582 IPR001818 Peptidase M10, metallopeptidase smi_1582 IPR024079 Metallopeptidase, catalytic domain smi_1583 IPR003447 FemABX peptidyl transferase smi_1583 IPR010978 tRNA-binding arm smi_1583 IPR016181 Acyl-CoA N-acyltransferase smi_1584 IPR003447 FemABX peptidyl transferase smi_1584 IPR016181 Acyl-CoA N-acyltransferase smi_1585 IPR000801 Putative esterase smi_1585 IPR029058 Alpha/Beta hydrolase fold smi_1586 IPR001279 Beta-lactamase-like smi_1586 IPR004613 Ribonuclease J smi_1586 IPR011108 RNA-metabolising metallo-beta-lactamase smi_1586 IPR030854 smi_1586 smi_1587 IPR001667 DDH domain smi_1587 IPR003156 DHHA1 domain smi_1587 IPR004610 Bacterial RecJ exonuclease smi_1587 IPR018779 Single-stranded-DNA-specific exonuclease RecJ, C-terminal smi_1588 IPR003439 ABC transporter-like smi_1588 IPR003593 AAA+ ATPase domain smi_1588 IPR017871 ABC transporter, conserved site smi_1588 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1588 IPR030679 smi_1588 smi_1589 IPR001638 Extracellular solute-binding protein, family 3 smi_1589 IPR018313 Extracellular solute-binding protein, family 3, conserved site smi_1590 IPR000515 MetI-like domain smi_1590 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family smi_1591 IPR000515 MetI-like domain smi_1591 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family smi_1592 IPR003439 ABC transporter-like smi_1592 IPR003593 AAA+ ATPase domain smi_1592 IPR008995 Molybdate/tungstate binding, C-terminal smi_1592 IPR012340 Nucleic acid-binding, OB-fold smi_1592 IPR013611 Transport-associated OB, type 2 smi_1592 IPR017871 ABC transporter, conserved site smi_1592 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1593 IPR009057 Homeodomain-like smi_1593 IPR025736 PucR C-terminal helix-turn-helix domain smi_1594 IPR000999 Ribonuclease III domain smi_1594 IPR008226 Mini-ribonuclease 3 family smi_1595 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding smi_1595 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold smi_1595 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR smi_1595 IPR015803 Cysteine-tRNA ligase smi_1595 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase smi_1595 IPR032678 smi_1595 smi_1596 IPR000182 GNAT domain smi_1596 IPR016181 Acyl-CoA N-acyltransferase smi_1597 IPR001451 Bacterial transferase hexapeptide repeat smi_1597 IPR005881 Serine O-acetyltransferase smi_1597 IPR011004 Trimeric LpxA-like smi_1598 IPR001247 Exoribonuclease, phosphorolytic domain 1 smi_1598 IPR003029 Ribosomal protein S1, RNA-binding domain smi_1598 IPR004087 K Homology domain smi_1598 IPR004088 K Homology domain, type 1 smi_1598 IPR012162 Polyribonucleotide nucleotidyltransferase smi_1598 IPR012340 Nucleic acid-binding, OB-fold smi_1598 IPR015847 Exoribonuclease, phosphorolytic domain 2 smi_1598 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain smi_1598 IPR020568 Ribosomal protein S5 domain 2-type fold smi_1598 IPR022967 RNA-binding domain, S1 smi_1598 IPR027408 PNPase/RNase PH domain smi_1599 IPR003171 Methylenetetrahydrofolate reductase smi_1599 IPR004620 5,10-methylenetetrahydrofolate reductase smi_1599 IPR029041 FAD-linked oxidoreductase-like smi_1600 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal smi_1600 IPR006276 Cobalamin-independent methionine synthase smi_1600 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal smi_1601 IPR002559 Transposase, IS4-like smi_1601 IPR008490 Transposase InsH, N-terminal smi_1602 IPR004260 Pyrimidine dimer DNA glycosylase smi_1602 IPR012650 Conserved hypothetical protein CHP02328 smi_1603 IPR013560 Domain of unknown function DUF1722 smi_1604 IPR004473 Restriction endonuclease, type I, HsdR smi_1604 IPR006935 Helicase/UvrB domain smi_1604 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal smi_1604 IPR014001 Helicase, superfamily 1/2, ATP-binding domain smi_1604 IPR022625 Type I restriction and modification enzyme, subunit R, C-terminal smi_1604 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1605 IPR000055 Restriction endonuclease, type I, HsdS smi_1606 IPR000055 Restriction endonuclease, type I, HsdS smi_1607 IPR000055 Restriction endonuclease, type I, HsdS smi_1608 IPR011204 Virulence protein RhuM-like smi_1608 IPR011991 Winged helix-turn-helix DNA-binding domain smi_1609 IPR002052 DNA methylase, N-6 adenine-specific, conserved site smi_1609 IPR003356 DNA methylase, adenine-specific smi_1609 IPR004546 Restriction endonuclease, type I, HsdM smi_1609 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain smi_1609 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like smi_1610 IPR025332 Protein of unknown function DUF4238 smi_1613 IPR015414 SNARE associated Golgi protein smi_1613 IPR032816 smi_1613 smi_1614 IPR000600 ROK smi_1615 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 smi_1615 IPR001996 Phosphotransferase system, IIB component, type 1 smi_1615 IPR003352 Phosphotransferase system, EIIC smi_1615 IPR010973 Phosphotransferase system, sucrose-specific IIBC component smi_1615 IPR011055 Duplicated hybrid motif smi_1615 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site smi_1616 IPR001362 Glycoside hydrolase, family 32 smi_1616 IPR006232 Sucrose-6-phosphate hydrolase smi_1616 IPR013148 Glycosyl hydrolase family 32, N-terminal smi_1616 IPR013189 Glycosyl hydrolase family 32, C-terminal smi_1616 IPR013320 Concanavalin A-like lectin/glucanase, subgroup smi_1616 IPR018053 Glycoside hydrolase, family 32, active site smi_1616 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain smi_1617 IPR000843 Transcription regulator HTH, LacI smi_1617 IPR010982 Lambda repressor-like, DNA-binding domain smi_1617 IPR028082 Periplasmic binding protein-like I smi_1618 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II smi_1618 IPR004553 Hydroxymethylglutaryl-CoA reductase, bacterial-type smi_1618 IPR009023 Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding domain smi_1618 IPR009029 Hydroxymethylglutaryl-CoA reductase, class I/II, substrate-binding domain smi_1618 IPR023074 Hydroxymethylglutaryl-CoA reductase, class I/II, catalytic domain smi_1618 IPR023076 Hydroxymethylglutaryl-CoA reductase, class I/II, conserved site smi_1619 IPR011554 Hydroxymethylglutaryl-CoA synthase, prokaryotic smi_1619 IPR013528 Hydroxymethylglutaryl-coenzyme A synthase, N-terminal smi_1619 IPR013746 Hydroxymethylglutaryl-coenzyme A synthase C-terminal domain smi_1619 IPR016039 Thiolase-like smi_1620 IPR024528 Domain of unknown function DUF3815 smi_1621 IPR010619 Domain of unknown function DUF1212 smi_1622 IPR000719 Protein kinase domain smi_1622 IPR005543 PASTA domain smi_1622 IPR008271 Serine/threonine-protein kinase, active site smi_1622 IPR011009 Protein kinase-like domain smi_1622 IPR017441 Protein kinase, ATP binding site smi_1623 IPR001932 Protein phosphatase 2C (PP2C)-like domain smi_1623 IPR015655 Protein phosphatase 2C smi_1624 IPR001678 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p smi_1624 IPR004573 rRNA small subunit methyltransferase B smi_1624 IPR006027 NusB/RsmB/TIM44 smi_1624 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site smi_1624 IPR023267 RNA (C5-cytosine) methyltransferase smi_1624 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like smi_1625 IPR001555 Phosphoribosylglycinamide formyltransferase, active site smi_1625 IPR002376 Formyl transferase, N-terminal smi_1625 IPR005793 Formyl transferase, C-terminal smi_1625 IPR005794 Methionyl-tRNA formyltransferase smi_1625 IPR011034 Formyl transferase, C-terminal-like smi_1626 IPR001650 Helicase, C-terminal smi_1626 IPR005259 Primosomal protein n smi_1626 IPR006935 Helicase/UvrB domain smi_1626 IPR014001 Helicase, superfamily 1/2, ATP-binding domain smi_1626 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1627 IPR003716 DNA-directed RNA polymerase, omega subunit smi_1627 IPR006110 RNA polymerase, subunit omega/K/RPB6 smi_1627 IPR012293 RNA polymerase subunit, RPB6/omega smi_1628 IPR008145 Guanylate kinase/L-type calcium channel beta subunit smi_1628 IPR017665 Guanylate kinase smi_1628 IPR020590 Guanylate kinase, conserved site smi_1628 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1629 IPR032290 smi_1629 smi_1629 IPR032782 smi_1629 smi_1630 IPR003607 HD/PDEase domain smi_1630 IPR004087 K Homology domain smi_1630 IPR004088 K Homology domain, type 1 smi_1630 IPR006674 HD domain smi_1630 IPR006675 Uncharacterised domain HDIG smi_1630 IPR017705 Ribonuclease Y smi_1630 IPR022711 Ribonuclease Y, N-terminal smi_1631 IPR011646 KAP P-loop smi_1631 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1632 IPR008513 Uncharacterised protein family UPF0348 smi_1632 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold smi_1633 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like smi_1634 IPR004394 Protein Iojap/ribosomal silencing factor RsfS smi_1635 IPR000868 Isochorismatase-like smi_1636 IPR003607 HD/PDEase domain smi_1636 IPR005249 Conserved hypothetical protein CHP00488 smi_1636 IPR006674 HD domain smi_1636 IPR006675 Uncharacterised domain HDIG smi_1637 IPR004821 Cytidyltransferase-like domain smi_1637 IPR005248 Probable nicotinate-nucleotide adenylyltransferase smi_1637 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold smi_1638 IPR001890 RNA-binding, CRM domain smi_1638 IPR017924 RNA-binding protein YhbY smi_1639 IPR006073 GTP binding domain smi_1639 IPR019988 GTP-binding protein, riobosome biogenesis, YqeH smi_1639 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1640 IPR006439 HAD hydrolase, subfamily IA smi_1640 IPR006549 HAD-superfamily hydrolase,subfamily IIIA smi_1640 IPR010021 HAD-superfamily phosphatase, YqeG-like smi_1640 IPR023214 HAD-like domain smi_1641 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB smi_1642 IPR006685 Mechanosensitive ion channel MscS smi_1642 IPR010920 Like-Sm (LSM) domain smi_1642 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 smi_1643 IPR001991 Sodium:dicarboxylate symporter smi_1643 IPR023025 Serine/threonine transporter SstT smi_1644 IPR010343 Protein of unknown function DUF939 smi_1644 IPR021062 Protein of unknown function DUF939, C-terminal smi_1645 IPR031548 smi_1645 smi_1646 IPR031551 smi_1646 smi_1647 IPR014268 Glycosyltransferase-stabilising protein Gtf2 smi_1648 IPR001296 Glycosyl transferase, family 1 smi_1648 IPR014267 Glycosyltransferase Gtf1 smi_1649 IPR000185 Protein translocase subunit SecA smi_1649 IPR011115 SecA DEAD-like, N-terminal smi_1649 IPR011116 SecA Wing/Scaffold smi_1649 IPR011130 SecA preprotein, cross-linking domain smi_1649 IPR014001 Helicase, superfamily 1/2, ATP-binding domain smi_1649 IPR022490 Protein translocase subunit SecA2 smi_1649 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1650 IPR022259 Accessory Sec system protein Asp3 smi_1651 IPR022267 Accessory Sec system protein Asp2 smi_1651 IPR029058 Alpha/Beta hydrolase fold smi_1652 IPR022372 Accessory secretory system protein Asp1 smi_1653 IPR002208 SecY/SEC61-alpha family smi_1653 IPR014269 Accessory Sec system protein translocase subunit SecY2 smi_1653 IPR023201 SecY subunit domain smi_1654 IPR001173 Glycosyltransferase 2-like smi_1654 IPR029044 Nucleotide-diphospho-sugar transferases smi_1655 IPR002495 Glycosyl transferase, family 8 smi_1655 IPR029044 Nucleotide-diphospho-sugar transferases smi_1656 IPR002495 Glycosyl transferase, family 8 smi_1656 IPR029044 Nucleotide-diphospho-sugar transferases smi_1657 IPR001173 Glycosyltransferase 2-like smi_1657 IPR029044 Nucleotide-diphospho-sugar transferases smi_1658 IPR002495 Glycosyl transferase, family 8 smi_1658 IPR014869 Domain of unknown function DUF1792 smi_1658 IPR029044 Nucleotide-diphospho-sugar transferases smi_1659 IPR016503 UDP-galactofuranosyltransferase smi_1660 IPR001451 Bacterial transferase hexapeptide repeat smi_1660 IPR011004 Trimeric LpxA-like smi_1661 IPR001173 Glycosyltransferase 2-like smi_1661 IPR002495 Glycosyl transferase, family 8 smi_1661 IPR029044 Nucleotide-diphospho-sugar transferases smi_1662 IPR019931 LPXTG cell wall anchor domain smi_1662 IPR019948 Gram-positive anchor smi_1662 IPR022263 KxYKxGKxW signal peptide smi_1662 IPR026465 Serine-rich repeat adhesion glycoprotein smi_1663 IPR000795 Elongation factor, GTP-binding domain smi_1663 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 smi_1663 IPR004548 Peptide chain release factor 3 smi_1663 IPR005225 Small GTP-binding protein domain smi_1663 IPR009000 Translation protein, beta-barrel domain smi_1663 IPR009022 Elongation factor G, III-V domain smi_1663 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1663 IPR031157 smi_1663 smi_1663 IPR032090 smi_1663 smi_1665 IPR003837 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit smi_1666 IPR000120 Amidase smi_1666 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit smi_1666 IPR020556 Amidase, conserved site smi_1666 IPR023631 Amidase signature domain smi_1667 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related smi_1667 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit smi_1667 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic smi_1667 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site smi_1667 IPR017959 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit B /E smi_1667 IPR018027 Asn/Gln amidotransferase smi_1669 IPR001059 Translation elongation factor P/YeiP, central smi_1669 IPR008991 Translation protein SH3-like domain smi_1669 IPR011768 Translation elongation factor P smi_1669 IPR012340 Nucleic acid-binding, OB-fold smi_1669 IPR013185 Translation elongation factor, KOW-like smi_1669 IPR013852 Translation elongation factor P/YeiP, conserved site smi_1669 IPR014722 Ribosomal protein L2 domain 2 smi_1669 IPR015365 Elongation factor P, C-terminal smi_1669 IPR020599 Translation elongation factor P/YeiP smi_1670 IPR005531 Alkaline shock protein Asp23 smi_1671 IPR006027 NusB/RsmB/TIM44 smi_1671 IPR011605 NusB antitermination factor smi_1672 IPR003675 CAAX amino terminal protease smi_1674 IPR001095 Acetyl-CoA carboxylase, alpha subunit smi_1674 IPR029045 ClpP/crotonase-like domain smi_1675 IPR000022 Carboxyl transferase smi_1675 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit smi_1675 IPR029045 ClpP/crotonase-like domain smi_1676 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase smi_1676 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain smi_1676 IPR005481 Carbamoyl-phosphate synthase, large subunit, N-terminal smi_1676 IPR005482 Biotin carboxylase, C-terminal smi_1676 IPR011054 Rudiment single hybrid motif smi_1676 IPR013815 ATP-grasp fold, subdomain 1 smi_1676 IPR013816 ATP-grasp fold, subdomain 2 smi_1676 IPR016185 Pre-ATP-grasp domain smi_1677 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ smi_1677 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ smi_1677 IPR029069 HotDog domain smi_1678 IPR000089 Biotin/lipoyl attachment smi_1678 IPR001249 Acetyl-CoA biotin carboxyl carrier smi_1678 IPR001882 Biotin-binding site smi_1678 IPR011053 Single hybrid motif smi_1679 IPR014030 Beta-ketoacyl synthase, N-terminal smi_1679 IPR014031 Beta-ketoacyl synthase, C-terminal smi_1679 IPR016039 Thiolase-like smi_1679 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 smi_1679 IPR018201 Beta-ketoacyl synthase, active site smi_1679 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain smi_1680 IPR002347 Glucose/ribitol dehydrogenase smi_1680 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase smi_1680 IPR016040 NAD(P)-binding domain smi_1680 IPR020904 Short-chain dehydrogenase/reductase, conserved site smi_1681 IPR001227 Acyl transferase domain smi_1681 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type smi_1681 IPR014043 Acyl transferase smi_1681 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase smi_1681 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding smi_1681 IPR020801 Polyketide synthase, acyl transferase domain smi_1681 IPR024925 Malonyl CoA-acyl carrier protein transacylase smi_1682 IPR004136 2-nitropropane dioxygenase, NPD smi_1682 IPR013785 Aldolase-type TIM barrel smi_1682 IPR017569 Enoyl-(acyl-carrier-protein) reductase II, putative smi_1683 IPR003231 Acyl carrier protein (ACP) smi_1683 IPR009081 Acyl carrier protein-like smi_1684 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 smi_1684 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal smi_1684 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III smi_1684 IPR016039 Thiolase-like smi_1685 IPR000835 MarR-type HTH domain smi_1685 IPR011991 Winged helix-turn-helix DNA-binding domain smi_1686 IPR001753 Crotonase superfamily smi_1686 IPR029045 ClpP/crotonase-like domain smi_1687 IPR001048 Aspartate/glutamate/uridylate kinase smi_1687 IPR001341 Aspartate kinase domain smi_1687 IPR005260 Aspartate kinase, monofunctional class smi_1687 IPR018042 Aspartate kinase, conserved site smi_1687 IPR027795 GATS-like ACT domain smi_1688 IPR010360 Protein of unknown function DUF956 smi_1689 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain smi_1689 IPR002317 Serine-tRNA ligase, type1 smi_1689 IPR010978 tRNA-binding arm smi_1689 IPR015866 Serine-tRNA synthetase, type1, N-terminal smi_1690 IPR002560 Transposase IS204/IS1001/IS1096/IS1165 smi_1691 IPR000524 Transcription regulator HTH, GntR smi_1691 IPR011991 Winged helix-turn-helix DNA-binding domain smi_1692 IPR027805 Transposase, Helix-turn-helix domain smi_1693 IPR027806 Harbinger transposase-derived nuclease domain smi_1695 IPR000064 Endopeptidase, NLPC/P60 domain smi_1695 IPR023346 Lysozyme-like domain smi_1696 IPR024735 Conjugative transposon protein TcpC smi_1697 IPR009057 Homeodomain-like smi_1697 IPR018060 DNA binding HTH domain, AraC-type smi_1697 IPR018062 HTH domain AraC-type, conserved site smi_1697 IPR020449 Transcription regulator HTH, AraC- type smi_1698 IPR003439 ABC transporter-like smi_1698 IPR003593 AAA+ ATPase domain smi_1698 IPR011527 ABC transporter type 1, transmembrane domain smi_1698 IPR017871 ABC transporter, conserved site smi_1698 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1701 IPR006119 Resolvase, N-terminal smi_1703 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal smi_1703 IPR024072 Dihydrofolate reductase-like domain smi_1704 IPR002575 Aminoglycoside phosphotransferase smi_1704 IPR011009 Protein kinase-like domain smi_1704 IPR016181 Acyl-CoA N-acyltransferase smi_1705 IPR000182 GNAT domain smi_1705 IPR016181 Acyl-CoA N-acyltransferase smi_1706 IPR026881 WYL domain smi_1707 IPR011991 Winged helix-turn-helix DNA-binding domain smi_1707 IPR013196 Helix-turn-helix, type 11 smi_1708 IPR002575 Aminoglycoside phosphotransferase smi_1708 IPR011009 Protein kinase-like domain smi_1708 IPR024165 Aminoglycoside 3-phosphotransferase smi_1709 IPR000182 GNAT domain smi_1709 IPR008125 Streptothricin acetyltransferase smi_1709 IPR016181 Acyl-CoA N-acyltransferase smi_1710 IPR007530 Aminoglycoside 6-adenylyltransferase smi_1711 IPR013216 Methyltransferase type 11 smi_1711 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like smi_1712 IPR002934 Nucleotidyl transferase domain smi_1713 IPR006119 Resolvase, N-terminal smi_1713 IPR011109 Recombinase smi_1713 IPR025827 Recombinase zinc beta ribbon domain smi_1715 IPR006119 Resolvase, N-terminal smi_1715 IPR011109 Recombinase smi_1715 IPR025827 Recombinase zinc beta ribbon domain smi_1716 IPR011991 Winged helix-turn-helix DNA-binding domain smi_1718 IPR003439 ABC transporter-like smi_1718 IPR003593 AAA+ ATPase domain smi_1718 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1719 IPR001647 DNA-binding HTH domain, TetR-type smi_1719 IPR009057 Homeodomain-like smi_1719 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal smi_1719 IPR023772 DNA-binding HTH domain, TetR-type, conserved site smi_1720 IPR004695 Voltage-dependent anion channel smi_1721 IPR003779 Carboxymuconolactone decarboxylase-like smi_1721 IPR004675 Alkylhydroperoxidase AhpD core smi_1721 IPR029032 AhpD-like smi_1722 IPR001463 Sodium:alanine symporter smi_1727 IPR011528 Nuclease-related domain, NERD smi_1728 IPR000740 GrpE nucleotide exchange factor smi_1728 IPR009012 GrpE nucleotide exchange factor, head smi_1729 IPR001623 DnaJ domain smi_1729 IPR011990 Tetratricopeptide-like helical domain smi_1729 IPR019734 Tetratricopeptide repeat smi_1730 IPR013126 Heat shock protein 70 family smi_1730 IPR018181 Heat shock protein 70, conserved site smi_1730 IPR029047 Heat shock protein 70kD, peptide-binding domain smi_1732 IPR001387 Cro/C1-type helix-turn-helix domain smi_1732 IPR010982 Lambda repressor-like, DNA-binding domain smi_1733 IPR000432 DNA mismatch repair protein MutS, C-terminal smi_1733 IPR002625 Smr protein/MutS2 C-terminal smi_1733 IPR005747 Endonuclease MutS2 smi_1733 IPR007696 DNA mismatch repair protein MutS, core smi_1733 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1734 IPR003825 Colicin V production, CvpA smi_1735 IPR007838 Cell division protein ZapA-like smi_1736 IPR001352 Ribonuclease HII/HIII smi_1736 IPR004641 Ribonuclease HIII smi_1736 IPR012337 Ribonuclease H-like domain smi_1736 IPR024567 Ribonuclease HII/HIII domain smi_1736 IPR024568 Ribonuclease HIII, N-terminal smi_1737 IPR000223 Peptidase S26A, signal peptidase I smi_1737 IPR015927 Peptidase S24/S26A/S26B/S26C smi_1737 IPR019756 Peptidase S26A, signal peptidase I, serine active site smi_1737 IPR019757 Peptidase S26A, signal peptidase I, lysine active site smi_1737 IPR019759 Peptidase S24/S26A/S26B smi_1737 IPR028360 Peptidase S24/S26, beta-ribbon domain smi_1738 IPR006345 DNA helicase, RecD/TraA type smi_1738 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1738 IPR027785 UvrD-like helicase C-terminal domain smi_1738 IPR029493 RecD helicase-like helix-hairpin-helix domain smi_1739 IPR001179 Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain smi_1739 IPR005215 Trigger factor smi_1739 IPR008880 Trigger factor, C-terminal domain smi_1739 IPR008881 Trigger factor, ribosome-binding, bacterial smi_1739 IPR027304 Trigger factor/SurA domain smi_1740 IPR014825 DNA alkylation repair enzyme smi_1740 IPR016024 Armadillo-type fold smi_1741 IPR000792 Transcription regulator LuxR, C-terminal smi_1741 IPR001789 Signal transduction response regulator, receiver domain smi_1741 IPR011006 CheY-like superfamily smi_1741 IPR011991 Winged helix-turn-helix DNA-binding domain smi_1741 IPR016032 Signal transduction response regulator, C-terminal effector smi_1742 IPR003594 Histidine kinase-like ATPase, C-terminal domain smi_1742 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain smi_1742 IPR017202 Sensor histidine kinase LiaS/VraS smi_1743 IPR016975 Cell wall-active antibiotic response protein smi_1743 IPR024425 Domain of unknown function DUF2154 smi_1744 IPR000262 FMN-dependent dehydrogenase smi_1744 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent smi_1744 IPR013785 Aldolase-type TIM barrel smi_1745 IPR005917 Phosphomevalonate kinase, Gram-positive smi_1745 IPR006204 GHMP kinase N-terminal domain smi_1745 IPR013750 GHMP kinase, C-terminal domain smi_1745 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup smi_1745 IPR020568 Ribosomal protein S5 domain 2-type fold smi_1746 IPR005935 Diphosphomevalonate/phosphomevalonate decarboxylase smi_1746 IPR006203 GHMP kinase, ATP-binding, conserved site smi_1746 IPR006204 GHMP kinase N-terminal domain smi_1746 IPR013750 GHMP kinase, C-terminal domain smi_1746 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup smi_1746 IPR020568 Ribosomal protein S5 domain 2-type fold smi_1746 IPR029765 Diphosphomevalonate decarboxylase smi_1747 IPR006204 GHMP kinase N-terminal domain smi_1747 IPR006205 Mevalonate kinase smi_1747 IPR006206 Mevalonate/galactokinase smi_1747 IPR013750 GHMP kinase, C-terminal domain smi_1747 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup smi_1747 IPR020568 Ribosomal protein S5 domain 2-type fold smi_1748 IPR018337 Cell wall/choline-binding repeat smi_1749 IPR001789 Signal transduction response regulator, receiver domain smi_1749 IPR001867 Signal transduction response regulator, C-terminal smi_1749 IPR011006 CheY-like superfamily smi_1749 IPR011991 Winged helix-turn-helix DNA-binding domain smi_1749 IPR016032 Signal transduction response regulator, C-terminal effector smi_1750 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating smi_1750 IPR006114 6-phosphogluconate dehydrogenase, C-terminal smi_1750 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding smi_1750 IPR006183 smi_1750 smi_1750 IPR006184 6-phosphogluconate-binding site smi_1750 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like smi_1750 IPR012284 Fibritin/6-phosphogluconate dehydrogenase, C-terminal extension smi_1750 IPR013328 Dehydrogenase, multihelical smi_1750 IPR016040 NAD(P)-binding domain smi_1751 IPR030858 smi_1751 smi_1752 IPR000241 Putative RNA methylase domain smi_1752 IPR002052 DNA methylase, N-6 adenine-specific, conserved site smi_1752 IPR004114 THUMP smi_1752 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like smi_1754 IPR007793 DivIVA family smi_1754 IPR011229 Cell cycle protein GpsB smi_1754 IPR019933 DivIVA domain smi_1755 IPR010697 Protein of unknown function DUF1273 smi_1756 IPR004612 Holliday junction resolvase RecU smi_1756 IPR011335 Restriction endonuclease type II-like smi_1756 IPR011856 tRNA endonuclease-like domain smi_1757 IPR001264 Glycosyl transferase, family 51 smi_1757 IPR001460 Penicillin-binding protein, transpeptidase smi_1757 IPR012338 Beta-lactamase/transpeptidase-like smi_1757 IPR023346 Lysozyme-like domain smi_1758 IPR000914 Bacterial extracellular solute-binding protein, family 5 smi_1758 IPR023765 Bacterial extracellular solute-binding protein, family 5, conserved site smi_1759 IPR004379 UDP-galactopyranose mutase smi_1759 IPR015899 UDP-galactopyranose mutase, C-terminal smi_1759 IPR016040 NAD(P)-binding domain smi_1761 IPR006047 Glycosyl hydrolase, family 13, catalytic domain smi_1761 IPR013780 Glycosyl hydrolase, family 13, all-beta smi_1761 IPR013781 Glycoside hydrolase, catalytic domain smi_1761 IPR015902 Glycoside hydrolase, family 13 smi_1761 IPR017853 Glycoside hydrolase, superfamily smi_1761 IPR032091 smi_1761 smi_1762 IPR014999 Uncharacterised protein family UPF0371 smi_1763 IPR003815 S-ribosylhomocysteinase (LuxS) smi_1763 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like smi_1764 IPR000477 Reverse transcriptase domain smi_1764 IPR013597 Group II intron, maturase-specific smi_1764 IPR030931 smi_1764 smi_1765 IPR001270 ClpA/B family smi_1765 IPR003593 AAA+ ATPase domain smi_1765 IPR003959 ATPase, AAA-type, core smi_1765 IPR019489 Clp ATPase, C-terminal smi_1765 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1765 IPR028299 ClpA/B, conserved site 2 smi_1766 IPR000715 Glycosyl transferase, family 4 smi_1766 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase smi_1766 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site smi_1767 IPR001460 Penicillin-binding protein, transpeptidase smi_1767 IPR005311 Penicillin-binding protein, dimerisation domain smi_1767 IPR005543 PASTA domain smi_1767 IPR012338 Beta-lactamase/transpeptidase-like smi_1768 IPR011922 Cell division protein FtsL smi_1769 IPR002903 Ribosomal RNA small subunit methyltransferase H smi_1769 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain smi_1769 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like smi_1770 IPR001387 Cro/C1-type helix-turn-helix domain smi_1770 IPR010982 Lambda repressor-like, DNA-binding domain smi_1771 IPR021697 Protein of unknown function DUF3278 smi_1773 IPR021697 Protein of unknown function DUF3278 smi_1774 IPR000889 Glutathione peroxidase smi_1774 IPR012336 Thioredoxin-like fold smi_1774 IPR029759 Glutathione peroxidase active site smi_1774 IPR029760 Glutathione peroxidase conserved site smi_1777 IPR001126 DNA-repair protein, UmuC-like smi_1777 IPR017961 DNA polymerase, Y-family, little finger domain smi_1777 IPR024728 DNA polymerase type-Y, HhH motif smi_1778 IPR001387 Cro/C1-type helix-turn-helix domain smi_1778 IPR010982 Lambda repressor-like, DNA-binding domain smi_1778 IPR015927 Peptidase S24/S26A/S26B/S26C smi_1778 IPR019759 Peptidase S24/S26A/S26B smi_1778 IPR028360 Peptidase S24/S26, beta-ribbon domain smi_1779 IPR000109 Proton-dependent oligopeptide transporter family smi_1779 IPR005279 Amino acid/peptide transporter family smi_1779 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site smi_1779 IPR020846 Major facilitator superfamily domain smi_1780 IPR025420 Domain of unknown function DUF4143 smi_1780 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1781 IPR011010 DNA breaking-rejoining enzyme, catalytic core smi_1781 IPR013762 Integrase-like, catalytic core smi_1783 IPR002577 Helix-turn-helix, HxlR type smi_1783 IPR011991 Winged helix-turn-helix DNA-binding domain smi_1784 IPR011701 Major facilitator superfamily smi_1784 IPR020846 Major facilitator superfamily domain smi_1785.1 IPR013762 Integrase-like, catalytic core smi_1789 IPR002543 FtsK domain smi_1789 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1791 IPR004843 Calcineurin-like phosphoesterase domain, apaH type smi_1791 IPR029052 Metallo-dependent phosphatase-like smi_1792 IPR004843 Calcineurin-like phosphoesterase domain, apaH type smi_1792 IPR029052 Metallo-dependent phosphatase-like smi_1794 IPR009061 DNA binding domain, putative smi_1794 IPR010093 Excisionase/Xis, DNA-binding smi_1794 IPR011991 Winged helix-turn-helix DNA-binding domain smi_1795 IPR002104 Integrase, catalytic smi_1795 IPR011010 DNA breaking-rejoining enzyme, catalytic core smi_1795 IPR013762 Integrase-like, catalytic core smi_1795 IPR023109 Integrase/recombinase, N-terminal smi_1796 IPR000754 Ribosomal protein S9 smi_1796 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup smi_1796 IPR020568 Ribosomal protein S5 domain 2-type fold smi_1796 IPR020574 Ribosomal protein S9, conserved site smi_1796 IPR023035 Ribosomal protein S9, bacterial/plastid smi_1797 IPR005822 Ribosomal protein L13 smi_1797 IPR005823 Ribosomal protein L13, bacterial-type smi_1797 IPR023563 Ribosomal protein L13, conserved site smi_1797 IPR023564 Ribosomal protein L13 domain smi_1798 IPR012337 Ribonuclease H-like domain smi_1798 IPR025246 Transposase IS30-like HTH domain smi_1800 IPR003439 ABC transporter-like smi_1800 IPR003593 AAA+ ATPase domain smi_1800 IPR017871 ABC transporter, conserved site smi_1800 IPR025302 Domain of unknown function DUF4162 smi_1800 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1801 IPR002547 tRNA-binding domain smi_1801 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit smi_1801 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding smi_1801 IPR005146 B3/B4 tRNA-binding domain smi_1801 IPR005147 tRNA synthetase, B5-domain smi_1801 IPR009061 DNA binding domain, putative smi_1801 IPR012340 Nucleic acid-binding, OB-fold smi_1801 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 smi_1802 IPR000182 GNAT domain smi_1802 IPR016181 Acyl-CoA N-acyltransferase smi_1803 IPR002319 Phenylalanyl-tRNA synthetase smi_1803 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal smi_1803 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit smi_1803 IPR010978 tRNA-binding arm smi_1803 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial smi_1804 IPR000182 GNAT domain smi_1804 IPR016181 Acyl-CoA N-acyltransferase smi_1805 IPR003115 ParB/Sulfiredoxin smi_1806 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase smi_1807 IPR024529 ECF transporter, substrate-specific component smi_1807 IPR025720 ECF transporter, Riboflavin transporter RibU smi_1808 IPR001537 tRNA/rRNA methyltransferase, SpoU type smi_1808 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase smi_1808 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal smi_1808 IPR029028 Alpha/beta knot methyltransferases smi_1809 IPR003339 ABC/ECF transporter, transmembrane component smi_1810 IPR003439 ABC transporter-like smi_1810 IPR003593 AAA+ ATPase domain smi_1810 IPR017871 ABC transporter, conserved site smi_1810 IPR022216 ABC cobalt transporter smi_1810 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1811 IPR009825 ECF transporter, substrate-specific component-like smi_1811 IPR022914 Protein of unknown function UPF0397 smi_1812 IPR002747 S-adenosyl-l-methionine hydroxide adenosyltransferase smi_1812 IPR023227 S-adenosyl-l-methionine hydroxide adenosyltransferase, C-terminal smi_1812 IPR023228 S-adenosyl-l-methionine hydroxide adenosyltransferase, N-terminal smi_1813 IPR003148 Regulator of K+ conductance, N-terminal smi_1813 IPR006036 Potassium uptake protein TrkA smi_1813 IPR006037 Regulator of K+ conductance, C-terminal smi_1813 IPR016040 NAD(P)-binding domain smi_1814 IPR003445 Cation transporter smi_1814 IPR004772 Potassium uptake protein TrkH family smi_1815 IPR001150 Glycine radical domain smi_1815 IPR004184 Pyruvate formate lyase domain smi_1815 IPR005949 Formate acetyltransferase smi_1815 IPR019777 Formate C-acetyltransferase glycine radical, conserved site smi_1816 IPR001126 DNA-repair protein, UmuC-like smi_1816 IPR017961 DNA polymerase, Y-family, little finger domain smi_1816 IPR022880 DNA polymerase IV smi_1816 IPR024728 DNA polymerase type-Y, HhH motif smi_1817 IPR003824 Undecaprenyl-diphosphatase UppP smi_1818 IPR018702 Protein of unknown function DUF2207, membrane smi_1819 IPR000515 MetI-like domain smi_1819 IPR001638 Extracellular solute-binding protein, family 3 smi_1819 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family smi_1820 IPR003439 ABC transporter-like smi_1820 IPR003593 AAA+ ATPase domain smi_1820 IPR017871 ABC transporter, conserved site smi_1820 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1820 IPR030679 smi_1820 smi_1822 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site smi_1822 IPR001721 ACT-like domain smi_1822 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme smi_1822 IPR011820 L-threonine dehydratase biosynthetic IlvA smi_1823 IPR000506 Acetohydroxy acid isomeroreductase C-terminal smi_1823 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like smi_1823 IPR013023 Acetohydroxy acid isomeroreductase smi_1823 IPR013116 Acetohydroxy acid isomeroreductase, catalytic smi_1823 IPR013328 Dehydrogenase, multihelical smi_1823 IPR016040 NAD(P)-binding domain smi_1824 IPR002912 ACT domain smi_1824 IPR004789 Acetolactate synthase, small subunit smi_1824 IPR019455 Acetolactate synthase, small subunit, C-terminal smi_1825 IPR000399 TPP-binding enzyme, conserved site smi_1825 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding smi_1825 IPR012000 Thiamine pyrophosphate enzyme, central domain smi_1825 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain smi_1825 IPR012846 Acetolactate synthase, large subunit, biosynthetic smi_1825 IPR029035 DHS-like NAD/FAD-binding domain smi_1825 IPR029061 Thiamin diphosphate-binding fold smi_1826 IPR004007 DhaL domain smi_1826 IPR019986 DAK2 domain-containing protein YloV smi_1826 IPR033470 smi_1826 smi_1827 IPR005531 Alkaline shock protein Asp23 smi_1828 IPR001383 Ribosomal protein L28 smi_1828 IPR026569 Ribosomal protein L28/L24 smi_1829 IPR012337 Ribonuclease H-like domain smi_1829 IPR025246 Transposase IS30-like HTH domain smi_1830 IPR012337 Ribonuclease H-like domain smi_1830 IPR025246 Transposase IS30-like HTH domain smi_1832 IPR007492 LytTR DNA-binding domain smi_1833 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase smi_1834 IPR003439 ABC transporter-like smi_1834 IPR003593 AAA+ ATPase domain smi_1834 IPR011527 ABC transporter type 1, transmembrane domain smi_1834 IPR017871 ABC transporter, conserved site smi_1834 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1835 IPR003439 ABC transporter-like smi_1835 IPR003593 AAA+ ATPase domain smi_1835 IPR011527 ABC transporter type 1, transmembrane domain smi_1835 IPR017871 ABC transporter, conserved site smi_1835 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1836 IPR000835 MarR-type HTH domain smi_1836 IPR011991 Winged helix-turn-helix DNA-binding domain smi_1836 IPR023187 Transcriptional regulator MarR-type, conserved site smi_1837 IPR002876 Transcriptional regulator TACO1-like smi_1837 IPR017856 Integrase, N-terminal zinc-binding domain-like smi_1837 IPR026562 Probable transcriptional regulatory protein YeeN smi_1837 IPR026563 Transcriptional regulator TACO1-like, domain 2 smi_1837 IPR026564 Transcriptional regulator TACO1-like, domain 3 smi_1837 IPR029072 YebC-like smi_1838 IPR002528 Multi antimicrobial extrusion protein smi_1839 IPR003593 AAA+ ATPase domain smi_1839 IPR013765 DNA recombination and repair protein RecA smi_1839 IPR020584 DNA recombination/repair protein RecA, conserved site smi_1839 IPR023400 DNA recombination and repair protein RecA, C-terminal smi_1839 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1840 IPR001453 Molybdopterin binding domain smi_1840 IPR008135 Competence-induced protein CinA smi_1840 IPR008136 CinA, C-terminal smi_1841 IPR004474 Cell envelope-related transcriptional attenuator domain smi_1842 IPR000182 GNAT domain smi_1842 IPR016181 Acyl-CoA N-acyltransferase smi_1843 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE smi_1843 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1845 IPR001564 Nucleoside diphosphate kinase smi_1845 IPR023005 Nucleoside diphosphate kinase, active site smi_1846 IPR000722 RNA polymerase, alpha subunit smi_1846 IPR006592 RNA polymerase, N-terminal smi_1846 IPR007066 RNA polymerase Rpb1, domain 3 smi_1846 IPR007080 RNA polymerase Rpb1, domain 1 smi_1846 IPR007081 RNA polymerase Rpb1, domain 5 smi_1846 IPR007083 RNA polymerase Rpb1, domain 4 smi_1846 IPR012754 DNA-directed RNA polymerase, subunit beta-prime smi_1847 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 smi_1847 IPR007121 RNA polymerase, beta subunit, conserved site smi_1847 IPR007641 RNA polymerase Rpb2, domain 7 smi_1847 IPR007642 RNA polymerase Rpb2, domain 2 smi_1847 IPR007644 RNA polymerase, beta subunit, protrusion smi_1847 IPR007645 RNA polymerase Rpb2, domain 3 smi_1847 IPR010243 DNA-directed RNA polymerase, beta subunit smi_1847 IPR014724 RNA polymerase Rpb2, OB-fold smi_1847 IPR015712 DNA-directed RNA polymerase, subunit 2 smi_1847 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain smi_1848 IPR004193 Glycoside hydrolase, family 13, N-terminal smi_1848 IPR005323 Bacterial pullanase-associated domain smi_1848 IPR005877 YSIRK Gram-positive signal peptide smi_1848 IPR006047 Glycosyl hydrolase, family 13, catalytic domain smi_1848 IPR011838 Pullulanase, extracellular smi_1848 IPR013781 Glycoside hydrolase, catalytic domain smi_1848 IPR013783 Immunoglobulin-like fold smi_1848 IPR013784 Carbohydrate-binding-like fold smi_1848 IPR014756 Immunoglobulin E-set smi_1848 IPR015902 Glycoside hydrolase, family 13 smi_1848 IPR017853 Glycoside hydrolase, superfamily smi_1848 IPR019931 LPXTG cell wall anchor domain smi_1849 IPR011251 Luciferase-like domain smi_1849 IPR022290 Conserved hypothetical protein CHP03858, luciferase-like monooxygenase, putative smi_1850 IPR001347 Sugar isomerase (SIS) smi_1850 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising smi_1850 IPR029055 Nucleophile aminohydrolases, N-terminal smi_1851 IPR001360 Glycoside hydrolase, family 1 smi_1851 IPR013781 Glycoside hydrolase, catalytic domain smi_1851 IPR017853 Glycoside hydrolase, superfamily smi_1852 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain smi_1852 IPR002316 Proline-tRNA ligase, class IIa smi_1852 IPR004154 Anticodon-binding smi_1852 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type smi_1852 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain smi_1852 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 smi_1853 IPR001478 PDZ domain smi_1853 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase smi_1853 IPR008915 Peptidase M50 smi_1854 IPR000374 Phosphatidate cytidylyltransferase smi_1855 IPR001441 Decaprenyl diphosphate synthase-like smi_1855 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site smi_1856 IPR012337 Ribonuclease H-like domain smi_1856 IPR025246 Transposase IS30-like HTH domain smi_1857 IPR012337 Ribonuclease H-like domain smi_1857 IPR025246 Transposase IS30-like HTH domain smi_1859 IPR009267 Protein of unknown function DUF925 smi_1860 IPR003593 AAA+ ATPase domain smi_1860 IPR004605 DNA helicase, Holliday junction RuvB type smi_1860 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal smi_1860 IPR008824 DNA helicase, Holliday junction RuvB type, N-terminal smi_1860 IPR011991 Winged helix-turn-helix DNA-binding domain smi_1860 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1861 IPR025882 Toxin Fst smi_1862 IPR025882 Toxin Fst smi_1863 IPR012337 Ribonuclease H-like domain smi_1863 IPR025246 Transposase IS30-like HTH domain smi_1866 IPR000182 GNAT domain smi_1866 IPR016181 Acyl-CoA N-acyltransferase smi_1867 IPR000182 GNAT domain smi_1867 IPR016181 Acyl-CoA N-acyltransferase smi_1868 IPR021560 Protein of unknown function DUF3021 smi_1869 IPR007492 LytTR DNA-binding domain smi_1870 IPR013525 ABC-2 type transporter smi_1871 IPR003439 ABC transporter-like smi_1871 IPR003593 AAA+ ATPase domain smi_1871 IPR017871 ABC transporter, conserved site smi_1871 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1872 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site smi_1872 IPR002300 Aminoacyl-tRNA synthetase, class Ia smi_1872 IPR002302 Leucine-tRNA ligase smi_1872 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain smi_1872 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding smi_1872 IPR013155 Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding smi_1872 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold smi_1872 IPR015413 Methionyl/Leucyl tRNA synthetase smi_1872 IPR025709 Leucyl-tRNA synthetase, editing domain smi_1873 IPR013078 Histidine phosphatase superfamily, clade-1 smi_1873 IPR029033 Histidine phosphatase superfamily smi_1875 IPR018337 Cell wall/choline-binding repeat smi_1876 IPR007841 Uncharacterised protein family UPF0210 smi_1877 IPR022986 Uncharacterised protein family UPF0237, ACT-type smi_1878 IPR000456 Ribosomal protein L17 smi_1879 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain smi_1879 IPR011260 RNA polymerase, alpha subunit, C-terminal smi_1879 IPR011262 DNA-directed RNA polymerase, insert domain smi_1879 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type smi_1879 IPR011773 DNA-directed RNA polymerase, alpha subunit smi_1880 IPR001971 Ribosomal protein S11 smi_1880 IPR018102 Ribosomal S11, conserved site smi_1880 IPR019981 Ribosomal protein S11, bacterial-type smi_1881 IPR001892 Ribosomal protein S13 smi_1881 IPR010979 Ribosomal protein S13-like, H2TH smi_1881 IPR018269 Ribosomal protein S13, conserved site smi_1881 IPR019980 Ribosomal protein S13, bacterial-type smi_1881 IPR027437 30s ribosomal protein S13, C-terminal smi_1882 IPR000473 Ribosomal protein L36 smi_1883 IPR004368 Translation initiation factor IF-1 smi_1883 IPR006196 RNA-binding domain, S1, IF1 type smi_1883 IPR012340 Nucleic acid-binding, OB-fold smi_1883 IPR022967 RNA-binding domain, S1 smi_1884 IPR000850 Adenylate kinase/UMP-CMP kinase smi_1884 IPR006259 Adenylate kinase subfamily smi_1884 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1885 IPR002208 SecY/SEC61-alpha family smi_1885 IPR023201 SecY subunit domain smi_1885 IPR026593 Protein translocase subunit SecY smi_1885 IPR030659 smi_1885 smi_1886 IPR001196 Ribosomal protein L15, conserved site smi_1886 IPR005749 Ribosomal protein L15, bacterial-type smi_1886 IPR021131 Ribosomal protein L18e/L15P smi_1886 IPR030878 smi_1886 smi_1887 IPR005996 Ribosomal protein L30, bacterial-type smi_1887 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain smi_1887 IPR018038 Ribosomal protein L30, conserved site smi_1888 IPR000851 Ribosomal protein S5 smi_1888 IPR005324 Ribosomal protein S5, C-terminal smi_1888 IPR005712 Ribosomal protein S5, bacterial-type smi_1888 IPR013810 Ribosomal protein S5, N-terminal smi_1888 IPR014720 Double-stranded RNA-binding domain smi_1888 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup smi_1888 IPR018192 Ribosomal protein S5, N-terminal, conserved site smi_1888 IPR020568 Ribosomal protein S5 domain 2-type fold smi_1889 IPR004389 Ribosomal protein L18, bacterial-type smi_1889 IPR005484 Ribosomal protein L18/L5 smi_1890 IPR000702 Ribosomal protein L6 smi_1890 IPR002358 Ribosomal protein L6, conserved site smi_1890 IPR019906 Ribosomal protein L6, bacterial-type smi_1890 IPR020040 Ribosomal protein L6, alpha-beta domain smi_1891 IPR000630 Ribosomal protein S8 smi_1892 IPR001209 Ribosomal protein S14 smi_1892 IPR018271 Ribosomal protein S14, conserved site smi_1892 IPR023053 Ribosomal protein S14, type Z smi_1893 IPR002132 Ribosomal protein L5 smi_1893 IPR020929 Ribosomal protein L5, conserved site smi_1893 IPR020930 Ribosomal protein L5, bacterial-type smi_1893 IPR022803 Ribosomal protein L5 domain smi_1893 IPR031309 smi_1893 smi_1893 IPR031310 smi_1893 smi_1894 IPR003256 Ribosomal protein L24 smi_1894 IPR005824 KOW smi_1894 IPR005825 Ribosomal protein L24/L26, conserved site smi_1894 IPR008991 Translation protein SH3-like domain smi_1894 IPR014722 Ribosomal protein L2 domain 2 smi_1895 IPR000218 Ribosomal protein L14b/L23e smi_1895 IPR005745 Ribosomal protein L14, bacterial-type smi_1895 IPR019972 Ribosomal protein L14 conserved site smi_1896 IPR000266 Ribosomal protein S17 smi_1896 IPR012340 Nucleic acid-binding, OB-fold smi_1896 IPR019979 Ribosomal protein S17, conserved site smi_1896 IPR019984 Ribosomal protein S17, bacterial-type smi_1897 IPR001854 Ribosomal protein L29 smi_1897 IPR018254 Ribosomal protein L29, conserved site smi_1898 IPR000114 Ribosomal protein L16 smi_1898 IPR016180 Ribosomal protein L10e/L16 smi_1898 IPR020798 Ribosomal protein L16, conserved site smi_1899 IPR001351 Ribosomal protein S3, C-terminal smi_1899 IPR004044 K Homology domain, type 2 smi_1899 IPR004087 K Homology domain smi_1899 IPR005704 Ribosomal protein S3, bacterial smi_1899 IPR009019 K homology domain, prokaryotic type smi_1899 IPR015946 K homology domain-like, alpha/beta smi_1899 IPR018280 Ribosomal protein S3, conserved site smi_1900 IPR001063 Ribosomal protein L22/L17 smi_1900 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type smi_1900 IPR018260 Ribosomal protein L22/L17, conserved site smi_1901 IPR002222 Ribosomal protein S19/S15 smi_1901 IPR005732 Ribosomal protein S19, bacterial-type smi_1901 IPR020934 Ribosomal protein S19 conserved site smi_1901 IPR023575 Ribosomal protein S19, superfamily smi_1902 IPR002171 Ribosomal protein L2 smi_1902 IPR005880 Ribosomal protein L2, bacterial/organellar-type smi_1902 IPR008991 Translation protein SH3-like domain smi_1902 IPR012340 Nucleic acid-binding, OB-fold smi_1902 IPR014722 Ribosomal protein L2 domain 2 smi_1902 IPR014726 Ribosomal protein L2, domain 3 smi_1902 IPR022666 Ribosomal Proteins L2, RNA binding domain smi_1902 IPR022669 Ribosomal protein L2, C-terminal smi_1902 IPR022671 Ribosomal protein L2, conserved site smi_1903 IPR001014 Ribosomal protein L23/L25, conserved site smi_1903 IPR012677 Nucleotide-binding, alpha-beta plait smi_1903 IPR012678 Ribosomal protein L23/L15e core domain smi_1903 IPR013025 Ribosomal protein L25/L23 smi_1904 IPR002136 Ribosomal protein L4/L1e smi_1904 IPR013005 Ribosomal protein L4/L1e, bacterial-type smi_1904 IPR023574 Ribosomal protein L4 domain smi_1905 IPR000597 Ribosomal protein L3 smi_1905 IPR009000 Translation protein, beta-barrel domain smi_1905 IPR019926 Ribosomal protein L3, conserved site smi_1905 IPR019927 Ribosomal protein L3, bacterial/organelle-type smi_1906 IPR001848 Ribosomal protein S10 smi_1906 IPR018268 Ribosomal protein S10, conserved site smi_1906 IPR027486 Ribosomal protein S10 domain smi_1907 IPR012337 Ribonuclease H-like domain smi_1907 IPR025246 Transposase IS30-like HTH domain smi_1908 IPR000764 Uridine kinase like smi_1908 IPR004566 Bacterial pantothenate kinase smi_1908 IPR006083 Phosphoribulokinase/uridine kinase smi_1908 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1909 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic smi_1910 IPR000182 GNAT domain smi_1910 IPR016181 Acyl-CoA N-acyltransferase smi_1912 IPR005144 ATP-cone smi_1912 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic smi_1912 IPR019777 Formate C-acetyltransferase glycine radical, conserved site smi_1915 IPR001736 Phospholipase D/Transphosphatidylase smi_1915 IPR022924 Cardiolipin synthase smi_1915 IPR025202 Phospholipase D-like domain smi_1915 IPR027379 Cardiolipin synthase N-terminal smi_1916 IPR020961 Domain of unknown function DUF3642, lipoprotein smi_1916 IPR027279 D-aminopeptidase/lipoprotein domain smi_1917 IPR001645 Folylpolyglutamate synthetase smi_1917 IPR004101 Mur ligase, C-terminal smi_1917 IPR013221 Mur ligase, central smi_1917 IPR018109 Folylpolyglutamate synthetase, conserved site smi_1918 IPR009711 Uncharacterised protein family UPF0473 smi_1919 IPR005227 Resolvase, holliday junction-type, YqgF-like smi_1919 IPR006641 YqgF/RNase H-like domain smi_1919 IPR012337 Ribonuclease H-like domain smi_1920 IPR009309 Uncharacterised protein family UPF0297 smi_1921 IPR009736 Protein of unknown function DUF1307 smi_1922 IPR006504 Transcriptional regulator Spx/MgsR smi_1922 IPR006660 Arsenate reductase-like smi_1922 IPR012336 Thioredoxin-like fold smi_1923 IPR001757 Cation-transporting P-type ATPase smi_1923 IPR004014 Cation-transporting P-type ATPase, N-terminal smi_1923 IPR006068 Cation-transporting P-type ATPase, C-terminal smi_1923 IPR006415 Magnesium-transporting P-type ATPase, subfamily IIIB smi_1923 IPR008250 P-type ATPase, A domain smi_1923 IPR018303 P-type ATPase, phosphorylation site smi_1923 IPR023214 HAD-like domain smi_1923 IPR023298 P-type ATPase, transmembrane domain smi_1923 IPR023299 P-type ATPase, cytoplasmic domain N smi_1924 IPR000587 Creatinase, N-terminal smi_1924 IPR000994 Peptidase M24, structural domain smi_1924 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site smi_1924 IPR028980 Creatinase/Aminopeptidase P, N-terminal smi_1924 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal smi_1925 IPR003439 ABC transporter-like smi_1925 IPR003593 AAA+ ATPase domain smi_1925 IPR004602 UvrABC system subunit A smi_1925 IPR013815 ATP-grasp fold, subdomain 1 smi_1925 IPR017871 ABC transporter, conserved site smi_1925 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1926 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB smi_1927 IPR009214 Protein of unknown function DUF1129 smi_1928 IPR003507 Muramoyl-tetrapeptide carboxypeptidase smi_1928 IPR027461 LD-carboxypeptidase A, C-terminal domain smi_1928 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal domain smi_1928 IPR029062 Class I glutamine amidotransferase-like smi_1929 IPR005019 Methyladenine glycosylase smi_1929 IPR011257 DNA glycosylase smi_1930 IPR000085 Bacterial DNA recombination protein RuvA smi_1930 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 smi_1930 IPR010994 RuvA domain 2-like smi_1930 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal smi_1930 IPR012340 Nucleic acid-binding, OB-fold smi_1930 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial smi_1931 IPR002099 DNA mismatch repair protein family smi_1931 IPR003594 Histidine kinase-like ATPase, C-terminal domain smi_1931 IPR013507 DNA mismatch repair protein, C-terminal smi_1931 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup smi_1931 IPR014762 DNA mismatch repair, conserved site smi_1931 IPR014790 MutL, C-terminal, dimerisation smi_1931 IPR020568 Ribosomal protein S5 domain 2-type fold smi_1931 IPR020667 DNA mismatch repair protein, MutL smi_1933 IPR007492 LytTR DNA-binding domain smi_1934 IPR021560 Protein of unknown function DUF3021 smi_1935 IPR004465 Ribonucleotide reductase Class Ib, NrdI smi_1935 IPR029039 Flavoprotein-like smi_1937 IPR001789 Signal transduction response regulator, receiver domain smi_1937 IPR009057 Homeodomain-like smi_1937 IPR011006 CheY-like superfamily smi_1937 IPR018060 DNA binding HTH domain, AraC-type smi_1937 IPR018062 HTH domain AraC-type, conserved site smi_1937 IPR020449 Transcription regulator HTH, AraC- type smi_1938 IPR003594 Histidine kinase-like ATPase, C-terminal domain smi_1938 IPR010559 Signal transduction histidine kinase, internal region smi_1939 IPR006938 Protein of unknown function DUF624 smi_1940 IPR011733 Conserved hypothetical CHP02185, integral membrane smi_1941 IPR000515 MetI-like domain smi_1942 IPR003439 ABC transporter-like smi_1942 IPR003593 AAA+ ATPase domain smi_1942 IPR017871 ABC transporter, conserved site smi_1942 IPR018449 NIL domain smi_1942 IPR026253 Methionine import ATP-binding protein MetN smi_1942 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1943 IPR002933 Peptidase M20 smi_1943 IPR011650 Peptidase M20, dimerisation domain smi_1944 IPR004872 Lipoprotein NlpA family smi_1945 IPR001638 Extracellular solute-binding protein, family 3 smi_1946 IPR001638 Extracellular solute-binding protein, family 3 smi_1947 IPR008407 Branched-chain amino acid transport, AzlD smi_1948 IPR011606 Branched-chain amino acid transport, permease smi_1949 IPR003675 CAAX amino terminal protease smi_1950 IPR001387 Cro/C1-type helix-turn-helix domain smi_1950 IPR010057 Transcription activator MutR, C-terminal smi_1950 IPR010982 Lambda repressor-like, DNA-binding domain smi_1951 IPR000905 Gcp-like domain smi_1951 IPR017860 Peptidase M22, conserved site smi_1951 IPR017861 Kae1/YgjD family smi_1951 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD smi_1952 IPR000182 GNAT domain smi_1952 IPR006464 Ribosomal-protein-alanine acetyltransferase smi_1952 IPR016181 Acyl-CoA N-acyltransferase smi_1953 IPR000905 Gcp-like domain smi_1953 IPR022496 tRNA threonylcarbamoyl adenosine modification protein YeaZ smi_1954 IPR012337 Ribonuclease H-like domain smi_1954 IPR025246 Transposase IS30-like HTH domain smi_1955 IPR023991 Bacteriocin, class IIb, lactobin A/cerein 7B family smi_1956 IPR010133 Bacteriocin-type signal sequence smi_1959 IPR009907 Protein of unknown function DUF1447 smi_1960 IPR001279 Beta-lactamase-like smi_1960 IPR001587 Ribonuclease J, conserved site smi_1960 IPR004613 Ribonuclease J smi_1960 IPR011108 RNA-metabolising metallo-beta-lactamase smi_1960 IPR030854 smi_1960 smi_1961 IPR002218 Glucose-inhibited division protein A-related smi_1961 IPR004416 Glucose-inhibited division protein A smi_1961 IPR020595 Glucose-inhibited division protein A-related, conserved site smi_1961 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain smi_1961 IPR026904 GidA associated domain 3 smi_1962 IPR000086 NUDIX hydrolase domain smi_1962 IPR015797 NUDIX hydrolase domain-like smi_1962 IPR020084 NUDIX hydrolase, conserved site smi_1963 IPR004506 tRNA-specific 2-thiouridylase smi_1963 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold smi_1963 IPR023382 Adenine nucleotide alpha hydrolase-like domains smi_1964 IPR012337 Ribonuclease H-like domain smi_1964 IPR025246 Transposase IS30-like HTH domain smi_1967 IPR000362 Fumarate lyase family smi_1967 IPR008948 L-Aspartase-like smi_1967 IPR009049 Argininosuccinate lyase smi_1967 IPR020557 Fumarate lyase, conserved site smi_1967 IPR022761 Fumarate lyase, N-terminal smi_1967 IPR024083 Fumarase/histidase, N-terminal smi_1967 IPR029419 Argininosuccinate lyase, C-terminal smi_1968 IPR001518 Argininosuccinate synthase smi_1968 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold smi_1968 IPR018223 Argininosuccinate synthase, conserved site smi_1968 IPR023434 Argininosuccinate synthase, type 1 subfamily smi_1968 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body smi_1969 IPR001320 Ionotropic glutamate receptor smi_1969 IPR001638 Extracellular solute-binding protein, family 3 smi_1970 IPR003439 ABC transporter-like smi_1970 IPR003593 AAA+ ATPase domain smi_1970 IPR017871 ABC transporter, conserved site smi_1970 IPR019895 Putative bacteriocin export ABC transporter, lactococcin 972 group smi_1970 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1971 IPR006541 Bacteriocin-associated integral membrane protein smi_1973 IPR003439 ABC transporter-like smi_1973 IPR003593 AAA+ ATPase domain smi_1973 IPR017871 ABC transporter, conserved site smi_1973 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1977 IPR001387 Cro/C1-type helix-turn-helix domain smi_1977 IPR010982 Lambda repressor-like, DNA-binding domain smi_1978 IPR018392 LysM domain smi_1979 IPR002912 ACT domain smi_1979 IPR004643 Iron-sulphur-dependent L-serine dehydratase beta subunit smi_1979 IPR005131 Serine dehydratase beta chain smi_1979 IPR029009 Allosteric substrate binding domain smi_1980 IPR004642 Serine dehydratase, alpha subunit smi_1980 IPR005130 Serine dehydratase-like, alpha subunit smi_1981 IPR023198 Phosphoglycolate phosphatase, domain 2 smi_1981 IPR023214 HAD-like domain smi_1982 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain smi_1982 IPR016040 NAD(P)-binding domain smi_1983 IPR001173 Glycosyltransferase 2-like smi_1983 IPR029044 Nucleotide-diphospho-sugar transferases smi_1984 IPR011701 Major facilitator superfamily smi_1984 IPR020846 Major facilitator superfamily domain smi_1985 IPR005149 Transcription regulator PadR N-terminal smi_1985 IPR011991 Winged helix-turn-helix DNA-binding domain smi_1986 IPR012963 Protein of unknown function DUF1700 smi_1987 IPR025164 Domain of unknown function DUF4097 smi_1989 IPR025387 Protein of unknown function DUF4299 smi_1990 IPR001763 Rhodanese-like domain smi_1990 IPR020936 Uncharacterised protein family UPF0176 smi_1990 IPR022111 Protein of unknown function DUF3650 smi_1991 IPR015046 Enterocin A Immunity smi_1992 IPR003675 CAAX amino terminal protease smi_1993 IPR022627 Domain of unknown function DUF3502 smi_1994 IPR000515 MetI-like domain smi_1995 IPR000515 MetI-like domain smi_1996 IPR013781 Glycoside hydrolase, catalytic domain smi_1996 IPR017853 Glycoside hydrolase, superfamily smi_1997 IPR000600 ROK smi_1998 IPR000602 Glycoside hydrolase family 38, N-terminal domain smi_1998 IPR011013 Galactose mutarotase-like domain smi_1998 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel smi_1998 IPR015341 Glycoside hydrolase, family 38, central domain smi_1998 IPR027291 Glycoside hydrolase 38/57, N-terminal domain smi_1998 IPR028995 Glycoside hydrolase, families 57/38, central domain smi_1999 IPR008313 Uncharacterised conserved protein UCP028846 smi_1999 IPR008928 Six-hairpin glycosidase-like smi_1999 IPR012341 Six-hairpin glycosidase smi_2005 IPR004968 DNA primase/nucleoside triphosphatase, C-terminal smi_2005 IPR006500 DNA primase, phage/plasmid smi_2005 IPR014818 Bacteriophage/plasmid primase, P4, C-terminal smi_2005 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_2006 IPR014820 Primase, C-terminal 1 smi_2007 IPR009061 DNA binding domain, putative smi_2008 IPR011991 Winged helix-turn-helix DNA-binding domain smi_2013 IPR014054 Bacteriophage regulatory protein, Rha family smi_2014 IPR010982 Lambda repressor-like, DNA-binding domain smi_2015 IPR001387 Cro/C1-type helix-turn-helix domain smi_2015 IPR010982 Lambda repressor-like, DNA-binding domain smi_2016 IPR007421 ATPase, AAA-4 smi_2016 IPR025831 ATP-dependent DNA helicase RecG C-terminal domain smi_2017 IPR002104 Integrase, catalytic smi_2017 IPR004107 Integrase, SAM-like, N-terminal smi_2017 IPR011010 DNA breaking-rejoining enzyme, catalytic core smi_2017 IPR013762 Integrase-like, catalytic core smi_2017 IPR023109 Integrase/recombinase, N-terminal smi_2018 IPR005887 Alpha-1,2-mannosidase, putative smi_2018 IPR008928 Six-hairpin glycosidase-like smi_2018 IPR012939 Glycosyl hydrolase family 92 smi_2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup smi_2019 IPR000933 Glycoside hydrolase, family 29 smi_2019 IPR008979 Galactose-binding domain-like smi_2019 IPR013781 Glycoside hydrolase, catalytic domain smi_2019 IPR017853 Glycoside hydrolase, superfamily smi_2020 IPR011081 Bacterial Ig-related smi_2021 IPR006101 Glycoside hydrolase, family 2 smi_2021 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich smi_2021 IPR006103 Glycoside hydrolase, family 2, TIM barrel smi_2021 IPR006104 Glycosyl hydrolases family 2, sugar binding domain smi_2021 IPR008979 Galactose-binding domain-like smi_2021 IPR013781 Glycoside hydrolase, catalytic domain smi_2021 IPR013812 Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain smi_2021 IPR017853 Glycoside hydrolase, superfamily smi_2021 IPR032311 smi_2021 smi_2022 IPR001107 Band 7 protein smi_2022 IPR001972 Stomatin family smi_2023 IPR005519 Acid phosphatase (Class B) smi_2023 IPR006423 5-nucleotidase lipoprotein e(P4) smi_2023 IPR023214 HAD-like domain smi_2024 IPR006127 Periplasmic solute binding protein family smi_2024 IPR006128 Adhesion lipoprotein smi_2024 IPR006129 Adhesin B smi_2024 IPR011038 Calycin-like smi_2024 IPR012674 Calycin smi_2024 IPR015304 ZinT domain smi_2025 IPR001626 ABC-3 smi_2025 IPR029022 ABC transporter, BtuC-like smi_2026 IPR003439 ABC transporter-like smi_2026 IPR003593 AAA+ ATPase domain smi_2026 IPR017871 ABC transporter, conserved site smi_2026 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_2027 IPR000835 MarR-type HTH domain smi_2027 IPR001845 HTH ArsR-type DNA-binding domain smi_2027 IPR011991 Winged helix-turn-helix DNA-binding domain smi_2028 IPR006998 DltD, C-terminal smi_2028 IPR006999 DltD, N-terminal smi_2028 IPR007002 DltD, central domain smi_2028 IPR023896 D-alanyl-lipoteichoic acid biosynthesis DltD smi_2029 IPR003230 D-alanine--poly(phosphoribitol) ligase subunit 2 smi_2029 IPR009081 Acyl carrier protein-like smi_2030 IPR024024 D-alanyl transfer protein DltB smi_2030 IPR024194 Alginate O-acetyltransferase AlgI/D-alanyl transfer protein DltB smi_2031 IPR000873 AMP-dependent synthetase/ligase smi_2031 IPR010071 Amino acid adenylation domain smi_2031 IPR010072 D-alanine--poly(phosphoribitol) ligase subunit 1 smi_2031 IPR020845 AMP-binding, conserved site smi_2031 IPR025110 AMP-binding enzyme C-terminal domain smi_2032 IPR011701 Major facilitator superfamily smi_2032 IPR020846 Major facilitator superfamily domain smi_2033 IPR000425 Major intrinsic protein smi_2033 IPR022357 Major intrinsic protein, conserved site smi_2033 IPR023271 Aquaporin-like smi_2034 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase smi_2034 IPR006076 FAD dependent oxidoreductase smi_2034 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain smi_2034 IPR031656 smi_2034 smi_2035 IPR000577 smi_2035 smi_2035 IPR005999 Glycerol kinase smi_2035 IPR018483 Carbohydrate kinase, FGGY, conserved site smi_2035 IPR018484 Carbohydrate kinase, FGGY, N-terminal smi_2035 IPR018485 Carbohydrate kinase, FGGY, C-terminal smi_2036 IPR007737 Mga helix-turn-helix domain smi_2036 IPR011991 Winged helix-turn-helix DNA-binding domain smi_2037 IPR000397 Heat shock protein Hsp33 smi_2037 IPR016153 Heat shock protein Hsp33, N-terminal smi_2037 IPR016154 Heat shock protein Hsp33, C-terminal smi_2038 IPR001269 tRNA-dihydrouridine synthase smi_2038 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 smi_2038 IPR013785 Aldolase-type TIM barrel smi_2038 IPR018517 tRNA-dihydrouridine synthase, conserved site smi_2038 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal smi_2039 IPR010699 Protein of unknown function DUF1275 smi_2042 IPR000086 NUDIX hydrolase domain smi_2042 IPR011991 Winged helix-turn-helix DNA-binding domain smi_2042 IPR015797 NUDIX hydrolase domain-like smi_2042 IPR020084 NUDIX hydrolase, conserved site smi_2043 IPR006419 Nicotinamide mononucleotide transporter PnuC smi_2044 IPR004821 Cytidyltransferase-like domain smi_2044 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold smi_2044 IPR016429 Bifunctional transcriptional regulator NadR smi_2044 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_2045 IPR001270 ClpA/B family smi_2045 IPR003593 AAA+ ATPase domain smi_2045 IPR003959 ATPase, AAA-type, core smi_2045 IPR004176 Clp, N-terminal smi_2045 IPR018368 ClpA/B, conserved site 1 smi_2045 IPR019489 Clp ATPase, C-terminal smi_2045 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_2045 IPR028299 ClpA/B, conserved site 2 smi_2046 IPR008463 Transcriptional repressor of class III stress genes smi_2047 IPR003439 ABC transporter-like smi_2047 IPR003593 AAA+ ATPase domain smi_2047 IPR017871 ABC transporter, conserved site smi_2047 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_2048 IPR015168 SsuA/THI5-like smi_2048 IPR027939 NMT1/THI5 family smi_2049 IPR000515 MetI-like domain smi_2050 IPR002767 Protein of unknown function DUF77 smi_2050 IPR029756 MTH1187/YkoF-like smi_2051 IPR003646 SH3-like domain, bacterial-type smi_2051 IPR007921 CHAP domain smi_2051 IPR018337 Cell wall/choline-binding repeat smi_2052 IPR009366 Veg smi_2053 IPR007692 DNA helicase, DnaB type smi_2053 IPR007693 DNA helicase, DnaB-like, N-terminal smi_2053 IPR007694 DNA helicase, DnaB-like, C-terminal smi_2053 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal smi_2053 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_2054 IPR000244 Ribosomal protein L9 smi_2054 IPR009027 Ribosomal protein L9/RNase H1, N-terminal smi_2054 IPR020069 Ribosomal protein L9, C-terminal smi_2054 IPR020070 Ribosomal protein L9, N-terminal smi_2054 IPR020594 Ribosomal protein L9, bacteria/chloroplast smi_2055 IPR001667 DDH domain smi_2055 IPR003156 DHHA1 domain smi_2055 IPR014528 Predicted signal transduction phosphoesterase, YybT type smi_2056 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein smi_2056 IPR032528 smi_2056 smi_2057 IPR000836 Phosphoribosyltransferase domain smi_2057 IPR029057 Phosphoribosyltransferase-like smi_2058 IPR001650 Helicase, C-terminal smi_2058 IPR006935 Helicase/UvrB domain smi_2058 IPR014001 Helicase, superfamily 1/2, ATP-binding domain smi_2058 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_2059 IPR000640 Translation elongation factor EFG, V domain smi_2059 IPR001498 Impact, N-terminal smi_2059 IPR009022 Elongation factor G, III-V domain smi_2059 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal smi_2059 IPR015796 Impact family, bacterial/archaeal smi_2059 IPR020568 Ribosomal protein S5 domain 2-type fold smi_2059 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site smi_2059 IPR023582 Impact family smi_2060 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site smi_2060 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme smi_2060 IPR005856 Cysteine synthase K/M smi_2060 IPR005859 Cysteine synthase A smi_2061 IPR001816 Translation elongation factor EFTs/EF1B smi_2061 IPR009060 UBA-like smi_2061 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation smi_2061 IPR018101 Translation elongation factor Ts, conserved site smi_2062 IPR001865 Ribosomal protein S2 smi_2062 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid smi_2062 IPR018130 Ribosomal protein S2, conserved site smi_2062 IPR023591 Ribosomal protein S2, flavodoxin-like domain smi_2063 IPR007921 CHAP domain smi_2063 IPR009148 Streptococcal non-M secreted SibA smi_2064 IPR007227 Cell shape-determining protein MreD smi_2065 IPR007221 Rod shape-determining protein MreC smi_2066 IPR003339 ABC/ECF transporter, transmembrane component smi_2066 IPR024919 ECF transporter transmembrane protein EcfT smi_2067 IPR003439 ABC transporter-like smi_2067 IPR003593 AAA+ ATPase domain smi_2067 IPR017871 ABC transporter, conserved site smi_2067 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_2067 IPR030946 smi_2067 smi_2068 IPR003439 ABC transporter-like smi_2068 IPR003593 AAA+ ATPase domain smi_2068 IPR017871 ABC transporter, conserved site smi_2068 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_2068 IPR030947 smi_2068 smi_2069 IPR000462 CDP-alcohol phosphatidyltransferase smi_2069 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase smi_2070 IPR010982 Lambda repressor-like, DNA-binding domain smi_2071 IPR007863 Peptidase M16, C-terminal domain smi_2071 IPR011237 Peptidase M16 domain smi_2071 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like smi_2071 IPR011765 Peptidase M16, N-terminal smi_2072 IPR007863 Peptidase M16, C-terminal domain smi_2072 IPR011237 Peptidase M16 domain smi_2072 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like smi_2073 IPR002942 RNA-binding S4 domain smi_2073 IPR014330 RNA-binding S4-related,YaaA smi_2074 IPR001238 DNA-binding, RecF smi_2074 IPR018078 DNA-binding, RecF, conserved site smi_2074 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_2075 IPR000644 CBS domain smi_2075 IPR001093 IMP dehydrogenase/GMP reductase smi_2075 IPR005990 Inosine-5'-monophosphate dehydrogenase smi_2075 IPR013785 Aldolase-type TIM barrel smi_2075 IPR015875 IMP dehydrogenase / GMP reductase, conserved site smi_2076 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site smi_2076 IPR002305 Aminoacyl-tRNA synthetase, class Ic smi_2076 IPR002306 Tryptophan-tRNA ligase smi_2076 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold smi_2076 IPR024109 Tryptophan-tRNA ligase, bacterial-type smi_2077 IPR003439 ABC transporter-like smi_2077 IPR003593 AAA+ ATPase domain smi_2077 IPR017871 ABC transporter, conserved site smi_2077 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_2077 IPR032781 smi_2077 smi_2078 IPR018580 Uncharacterised protein family YfhO smi_2079 IPR017500 Phage infection protein, YhgE, N-terminal smi_2079 IPR017501 Phage infection protein, YhgE, C-terminal smi_2079 IPR023908 xxxLxxG heptad repeat smi_2080 IPR001647 DNA-binding HTH domain, TetR-type smi_2080 IPR009057 Homeodomain-like smi_2080 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal smi_2083 IPR001789 Signal transduction response regulator, receiver domain smi_2083 IPR007492 LytTR DNA-binding domain smi_2083 IPR011006 CheY-like superfamily smi_2084 IPR003594 Histidine kinase-like ATPase, C-terminal domain smi_2084 IPR032834 smi_2084 smi_2085 IPR004288 Competence protein, ComC smi_2087 IPR003742 SPOUT methyltransferase, predicted smi_2087 IPR016051 Ribosomal RNA large subunit methyltransferase H smi_2087 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal smi_2087 IPR029028 Alpha/beta knot methyltransferases smi_2088 IPR001478 PDZ domain smi_2088 IPR001940 Peptidase S1C smi_2088 IPR009003 Trypsin-like cysteine/serine peptidase domain smi_2089 IPR003115 ParB/Sulfiredoxin smi_2089 IPR004437 ParB/RepB/Spo0J partition protein family