smi_0001 SM00382 ATPases associated with a variety of cellular activities smi_0001 SM00760 Bacterial dnaA protein helix-turn-helix domain smi_0002 SM00480 DNA polymerase III beta subunit smi_0006 SM00487 DEAD-like helicases superfamily smi_0006 SM00490 helicase superfamily c-terminal domain smi_0006 SM00982 smi_0006 smi_0006 SM01058 CarD-like/TRCF domain smi_0007 SM00363 S4 RNA-binding domain smi_0010 SM00977 TilS substrate C-terminal domain smi_0012 SM00382 ATPases associated with a variety of cellular activities smi_0022 SM00788 Adenylosuccinate synthetase smi_0028 SM00382 ATPases associated with a variety of cellular activities smi_0030 SM00947 Carbonic anhydrase smi_0033 SM01400 smi_0033 smi_0048 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs smi_0048 SM00474 3'-5' exonuclease smi_0048 SM00475 5'-3' exonuclease smi_0048 SM00482 DNA polymerase A domain smi_0049 SM00881 CoA binding domain smi_0056 SM00530 Helix-turn-helix XRE-family like proteins smi_0059 SM00448 cheY-homologous receiver domain smi_0059 SM00850 LytTr DNA-binding domain smi_0064 SM00382 ATPases associated with a variety of cellular activities smi_0067 SM01211 smi_0067 smi_0072 SM00798 AICARFT/IMPCHase bienzyme smi_0072 SM00851 MGS-like domain smi_0073 SM01209 smi_0073 smi_0073 SM01210 smi_0073 smi_0074 SM01001 AIR carboxylase smi_0076 SM00998 Adenylosuccinate lyase C-terminus smi_0078 SM00345 helix_turn_helix gluconate operon transcriptional repressor smi_0078 SM00866 smi_0078 smi_0086 SM00198 SCP / Tpx-1 / Ag5 / PR-1 / Sc7 family of extracellular domains. smi_0092 SM00448 cheY-homologous receiver domain smi_0092 SM00862 Transcriptional regulatory protein, C terminal smi_0093 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain smi_0093 SM00387 Histidine kinase-like ATPases smi_0093 SM00388 His Kinase A (phosphoacceptor) domain smi_0094 SM00363 S4 RNA-binding domain smi_0094 SM01390 smi_0094 smi_0103 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor smi_0112 SM00861 Transketolase, pyrimidine binding domain smi_0120 SM00530 Helix-turn-helix XRE-family like proteins smi_0123 SM00382 ATPases associated with a variety of cellular activities smi_0129 SM00354 helix_turn _helix lactose operon repressor smi_0139 SM00363 S4 RNA-binding domain smi_0150 SM00836 DALR anticodon binding domain smi_0150 SM01016 Arginyl tRNA synthetase N terminal dom smi_0152 SM00533 DNA-binding domain of DNA mismatch repair MUTS family smi_0152 SM00534 ATPase domain of DNA mismatch repair MUTS family smi_0153 SM00382 ATPases associated with a variety of cellular activities smi_0154 SM00382 ATPases associated with a variety of cellular activities smi_0156 SM01321 smi_0156 smi_0186 SM00382 ATPases associated with a variety of cellular activities smi_0196 SM00257 Lysin motif smi_0203 SM00829 Enoylreductase smi_0205 SM00382 ATPases associated with a variety of cellular activities smi_0217 SM00393 Putative single-stranded nucleic acids-binding domain smi_0217 SM01245 smi_0217 smi_0222 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family smi_0224 SM01007 Class II Aldolase and Adducin N-terminal domain smi_0227 SM00861 Transketolase, pyrimidine binding domain smi_0228 SM01323 smi_0228 smi_0229 SM00226 Low molecular weight phosphatase family smi_0230 SM00698 Possible plasma membrane-binding motif in junctophilins, PIP-5-kinases and protein kinases. smi_0232 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain smi_0238 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. smi_0238 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. smi_0256 SM00382 ATPases associated with a variety of cellular activities smi_0259 SM00421 helix_turn_helix, Lux Regulon smi_0259 SM00448 cheY-homologous receiver domain smi_0263 SM00838 Elongation factor G C-terminus smi_0263 SM00889 Elongation factor G, domain IV smi_0264 SM00479 smi_0264 smi_0264 SM00481 DNA polymerase alpha chain like domain smi_0267 SM00363 S4 RNA-binding domain smi_0275 SM00829 Enoylreductase smi_0282 SM00905 Dihydroneopterin aldolase smi_0284 SM00354 helix_turn _helix lactose operon repressor smi_0285 SM00870 smi_0285 smi_0294 SM00493 smi_0294 smi_0295 SM00650 Ribosomal RNA adenine dimethylases smi_0298 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain smi_0305 SM00382 ATPases associated with a variety of cellular activities smi_0308 SM00448 cheY-homologous receiver domain smi_0308 SM00862 Transcriptional regulatory protein, C terminal smi_0309 SM00388 His Kinase A (phosphoacceptor) domain smi_0311 SM00967 RNA 2'-O ribose methyltransferase substrate binding smi_0319 SM00892 DNA/RNA non-specific endonuclease smi_0320 SM01091 Transporter associated domain smi_0325 SM00382 ATPases associated with a variety of cellular activities smi_0326 SM00382 ATPases associated with a variety of cellular activities smi_0329 SM00382 ATPases associated with a variety of cellular activities smi_0335 SM00116 Domain in cystathionine beta-synthase and other proteins. smi_0339 SM00363 S4 RNA-binding domain smi_0340 SM01234 smi_0340 smi_0345 SM01208 smi_0345 smi_0348 SM00422 helix_turn_helix, mercury resistance smi_0349 SM01230 smi_0349 smi_0357 SM00271 DnaJ molecular chaperone homology domain smi_0361 SM00382 ATPases associated with a variety of cellular activities smi_0364 SM00850 LytTr DNA-binding domain smi_0365 SM00448 cheY-homologous receiver domain smi_0365 SM00850 LytTr DNA-binding domain smi_0376 SM00322 K homology RNA-binding domain smi_0391 SM00387 Histidine kinase-like ATPases smi_0394 SM00487 DEAD-like helicases superfamily smi_0394 SM00490 helicase superfamily c-terminal domain smi_0397 SM00382 ATPases associated with a variety of cellular activities smi_0407 SM00857 Resolvase, N terminal domain smi_0409 SM00530 Helix-turn-helix XRE-family like proteins smi_0410 SM00530 Helix-turn-helix XRE-family like proteins smi_0422 SM00487 DEAD-like helicases superfamily smi_0422 SM00490 helicase superfamily c-terminal domain smi_0424 SM00942 Primase C terminal 1 (PriCT-1) smi_0424 SM00943 Bifunctional DNA primase/polymerase, N-terminal smi_0425 SM00885 D5 N terminal like smi_0426 SM00990 smi_0426 smi_0463 SM00257 Lysin motif smi_0478 SM00644 smi_0478 smi_0481 SM00883 Chaperonin 10 Kd subunit smi_0485 SM00530 Helix-turn-helix XRE-family like proteins smi_0514 SM00347 helix_turn_helix multiple antibiotic resistance protein smi_0515 SM00382 ATPases associated with a variety of cellular activities smi_0519 SM00354 helix_turn _helix lactose operon repressor smi_0532 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor smi_0536 SM00382 ATPases associated with a variety of cellular activities smi_0537 SM00382 ATPases associated with a variety of cellular activities smi_0557 SM00829 Enoylreductase smi_0560 SM00382 ATPases associated with a variety of cellular activities smi_0575 SM00347 helix_turn_helix multiple antibiotic resistance protein smi_0578 SM00382 ATPases associated with a variety of cellular activities smi_0580 SM00382 ATPases associated with a variety of cellular activities smi_0581 SM00345 helix_turn_helix gluconate operon transcriptional repressor smi_0589 SM00957 SecA DEAD-like domain smi_0589 SM00958 SecA preprotein cross-linking domain smi_0593 SM01005 Alanine racemase, C-terminal domain smi_0594 SM00487 DEAD-like helicases superfamily smi_0594 SM00490 helicase superfamily c-terminal domain smi_0601 SM00020 Trypsin-like serine protease smi_0608 SM01130 smi_0608 smi_0614 SM00493 smi_0614 smi_0620 SM00842 Cell division protein FtsA smi_0621 SM00864 Tubulin/FtsZ family, GTPase domain smi_0621 SM00865 Tubulin/FtsZ family, C-terminal domain smi_0625 SM00363 S4 RNA-binding domain smi_0629 SM00855 Phosphoglycerate mutase family smi_0631 SM00382 ATPases associated with a variety of cellular activities smi_0636 SM00382 ATPases associated with a variety of cellular activities smi_0640 SM00849 Metallo-beta-lactamase superfamily smi_0642 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. smi_0642 SM00954 Region found in RelA / SpoT proteins smi_0645 SM00529 Helix-turn-helix diphteria tox regulatory element smi_0645 SM00899 smi_0645 smi_0649 SM00448 cheY-homologous receiver domain smi_0649 SM00862 Transcriptional regulatory protein, C terminal smi_0650 SM00387 Histidine kinase-like ATPases smi_0651 SM00382 ATPases associated with a variety of cellular activities smi_0653 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain smi_0656 SM01387 smi_0656 smi_0658 SM00382 ATPases associated with a variety of cellular activities smi_0661 SM00563 Phosphate acyltransferases smi_0684 SM00938 Nitrogen regulatory protein P-II smi_0685 SM00487 DEAD-like helicases superfamily smi_0685 SM00490 helicase superfamily c-terminal domain smi_0691 SM00382 ATPases associated with a variety of cellular activities smi_0693 SM00448 cheY-homologous receiver domain smi_0693 SM00862 Transcriptional regulatory protein, C terminal smi_0694 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain smi_0694 SM00387 Histidine kinase-like ATPases smi_0694 SM00388 His Kinase A (phosphoacceptor) domain smi_0701 SM00382 ATPases associated with a variety of cellular activities smi_0708 SM00729 Elongator protein 3, MiaB family, Radical SAM smi_0720 SM00729 Elongator protein 3, MiaB family, Radical SAM smi_0724 SM00530 Helix-turn-helix XRE-family like proteins smi_0735 SM00382 ATPases associated with a variety of cellular activities smi_0736 SM00382 ATPases associated with a variety of cellular activities smi_0738 SM00062 Bacterial periplasmic substrate-binding proteins smi_0738 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. smi_0739 SM00345 helix_turn_helix gluconate operon transcriptional repressor smi_0743 SM00382 ATPases associated with a variety of cellular activities smi_0749 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain smi_0750 SM00642 Alpha-amylase domain smi_0751 SM00382 ATPases associated with a variety of cellular activities smi_0776 SM00382 ATPases associated with a variety of cellular activities smi_0777 SM00382 ATPases associated with a variety of cellular activities smi_0794 SM01130 smi_0794 smi_0809 SM01321 smi_0809 smi_0811 SM01321 smi_0811 smi_0813 SM01321 smi_0813 smi_0814 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase smi_0821 SM00382 ATPases associated with a variety of cellular activities smi_0823.1 SM00530 Helix-turn-helix XRE-family like proteins smi_0836 SM00382 ATPases associated with a variety of cellular activities smi_0840 SM00382 ATPases associated with a variety of cellular activities smi_0849 SM01022 smi_0849 smi_0851 SM00448 cheY-homologous receiver domain smi_0851 SM00862 Transcriptional regulatory protein, C terminal smi_0852 SM00387 Histidine kinase-like ATPases smi_0852 SM00388 His Kinase A (phosphoacceptor) domain smi_0855 SM00479 smi_0855 smi_0855 SM00487 DEAD-like helicases superfamily smi_0855 SM00491 smi_0855 smi_0860 SM00387 Histidine kinase-like ATPases smi_0860 SM00433 TopoisomeraseII smi_0865 SM00382 ATPases associated with a variety of cellular activities smi_0865 SM01086 C-terminal, D2-small domain, of ClpB protein smi_0868 SM00382 ATPases associated with a variety of cellular activities smi_0885 SM00422 helix_turn_helix, mercury resistance smi_0889 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain smi_0890 SM01133 smi_0890 smi_0893 SM00382 ATPases associated with a variety of cellular activities smi_0896 SM01207 smi_0896 smi_0897 SM00387 Histidine kinase-like ATPases smi_0897 SM00433 TopoisomeraseII smi_0905 SM00434 DNA Topoisomerase IV smi_0911 SM00316 Ribosomal protein S1-like RNA-binding domain smi_0913 SM00382 ATPases associated with a variety of cellular activities smi_0915 SM00382 ATPases associated with a variety of cellular activities smi_0920 SM00936 Penicillin-binding protein 5, C-terminal domain smi_0923 SM00487 DEAD-like helicases superfamily smi_0923 SM00490 helicase superfamily c-terminal domain smi_0932 SM00363 S4 RNA-binding domain smi_0934 SM00849 Metallo-beta-lactamase superfamily smi_0935 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase smi_0955 SM00278 Helix-hairpin-helix DNA-binding motif class 1 smi_0956 SM00849 Metallo-beta-lactamase superfamily smi_0957 SM00382 ATPases associated with a variety of cellular activities smi_0966 SM00047 Lysozyme subfamily 2 smi_0971 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain smi_0971 SM01232 smi_0971 smi_0976 SM00316 Ribosomal protein S1-like RNA-binding domain smi_0976 SM00955 smi_0976 smi_0990 SM00382 ATPases associated with a variety of cellular activities smi_0991 SM00400 zinc finger smi_0991 SM00493 smi_0991 smi_1001 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain smi_1001 SM00940 X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal smi_1003 SM00481 DNA polymerase alpha chain like domain smi_1007 SM00434 DNA Topoisomerase IV smi_1017 SM00363 S4 RNA-binding domain smi_1021 SM00838 Elongation factor G C-terminus smi_1029 SM01133 smi_1029 smi_1036 SM01061 CAT RNA binding domain smi_1041 SM00420 helix_turn_helix, Deoxyribose operon repressor smi_1041 SM01134 smi_1041 smi_1052 SM01120 smi_1052 smi_1055 SM00986 Uracil DNA glycosylase superfamily smi_1055 SM00987 UreE urease accessory protein, C-terminal domain smi_1070 SM00382 ATPases associated with a variety of cellular activities smi_1072 SM00388 His Kinase A (phosphoacceptor) domain smi_1073 SM00448 cheY-homologous receiver domain smi_1073 SM00862 Transcriptional regulatory protein, C terminal smi_1076 SM00382 ATPases associated with a variety of cellular activities smi_1080 SM00731 SprT homologues. smi_1081 SM00316 Ribosomal protein S1-like RNA-binding domain smi_1081 SM00732 Likely ribonuclease with RNase H fold. smi_1092 SM00382 ATPases associated with a variety of cellular activities smi_1102 SM00530 Helix-turn-helix XRE-family like proteins smi_1104 SM00642 Alpha-amylase domain smi_1105 SM00046 Diacylglycerol kinase catalytic domain (presumed) smi_1127 SM00937 smi_1127 smi_1132 SM01130 smi_1132 smi_1133 SM00859 Semialdehyde dehydrogenase, NAD binding domain smi_1150 SM00411 bacterial (prokaryotic) histone like domain smi_1153 SM00904 Riboflavin kinase smi_1155 SM00116 Domain in cystathionine beta-synthase and other proteins. smi_1159 SM01192 smi_1159 smi_1159 SM01193 smi_1159 smi_1166 SM00642 Alpha-amylase domain smi_1168 SM00642 Alpha-amylase domain smi_1169 SM00278 Helix-hairpin-helix DNA-binding motif class 1 smi_1169 SM00292 breast cancer carboxy-terminal domain smi_1169 SM00532 Ligase N family smi_1172 SM00382 ATPases associated with a variety of cellular activities smi_1175 SM00849 Metallo-beta-lactamase superfamily smi_1176 SM00091 PAS domain smi_1176 SM00387 Histidine kinase-like ATPases smi_1176 SM00388 His Kinase A (phosphoacceptor) domain smi_1177 SM00448 cheY-homologous receiver domain smi_1177 SM00862 Transcriptional regulatory protein, C terminal smi_1178 SM00478 endonuclease III smi_1182 SM00954 Region found in RelA / SpoT proteins smi_1183 SM01118 smi_1183 smi_1184 SM01400 smi_1184 smi_1188 SM00881 CoA binding domain smi_1201 SM00487 DEAD-like helicases superfamily smi_1201 SM00490 helicase superfamily c-terminal domain smi_1203 SM00062 Bacterial periplasmic substrate-binding proteins smi_1203 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. smi_1204 SM00382 ATPases associated with a variety of cellular activities smi_1206 SM00382 ATPases associated with a variety of cellular activities smi_1206 SM00962 SRP54-type protein, GTPase domain smi_1206 SM00963 SRP54-type protein, helical bundle domain smi_1209 SM00968 SMC proteins Flexible Hinge Domain smi_1210 SM00358 Double-stranded RNA binding motif smi_1210 SM00535 Ribonuclease III family smi_1212 SM01240 smi_1212 smi_1217 SM01329 smi_1217 smi_1218 SM00917 LeuA allosteric (dimerisation) domain smi_1222 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain smi_1222 SM00437 Bacterial DNA topoisomerase I DNA-binding domain smi_1222 SM00493 smi_1222 smi_1233 SM00851 MGS-like domain smi_1233 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain smi_1233 SM01209 smi_1233 smi_1234 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain smi_1237 SM00478 endonuclease III smi_1240 SM00382 ATPases associated with a variety of cellular activities smi_1251 SM00487 DEAD-like helicases superfamily smi_1251 SM00490 helicase superfamily c-terminal domain smi_1252 SM00382 ATPases associated with a variety of cellular activities smi_1252 SM00962 SRP54-type protein, GTPase domain smi_1252 SM00963 SRP54-type protein, helical bundle domain smi_1255 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. smi_1259 SM00530 Helix-turn-helix XRE-family like proteins smi_1268 SM00830 Chorismate mutase type II smi_1279 SM00857 Resolvase, N terminal domain smi_1285 SM00479 smi_1285 smi_1295 SM00855 Phosphoglycerate mutase family smi_1297 SM00062 Bacterial periplasmic substrate-binding proteins smi_1297 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. smi_1298 SM00382 ATPases associated with a variety of cellular activities smi_1300 SM00028 Tetratricopeptide repeats smi_1309 SM00382 ATPases associated with a variety of cellular activities smi_1317 SM01208 smi_1317 smi_1324 SM00530 Helix-turn-helix XRE-family like proteins smi_1334 SM00889 Elongation factor G, domain IV smi_1336 SM00530 Helix-turn-helix XRE-family like proteins smi_1343 SM00345 helix_turn_helix gluconate operon transcriptional repressor smi_1343 SM00866 smi_1343 smi_1349 SM00530 Helix-turn-helix XRE-family like proteins smi_1353 SM00981 smi_1353 smi_1356 SM00382 ATPases associated with a variety of cellular activities smi_1356 SM00843 smi_1356 smi_1359 SM00420 helix_turn_helix, Deoxyribose operon repressor smi_1359 SM01134 smi_1359 smi_1367 SM00530 Helix-turn-helix XRE-family like proteins smi_1376 SM00854 Bacterial capsule synthesis protein PGA_cap smi_1378 SM00967 RNA 2'-O ribose methyltransferase substrate binding smi_1381 SM00382 ATPases associated with a variety of cellular activities smi_1402 SM00487 DEAD-like helicases superfamily smi_1402 SM00490 helicase superfamily c-terminal domain smi_1407 SM00382 ATPases associated with a variety of cellular activities smi_1408 SM00937 smi_1408 smi_1410 SM00116 Domain in cystathionine beta-synthase and other proteins. smi_1411 SM00382 ATPases associated with a variety of cellular activities smi_1412 SM00382 ATPases associated with a variety of cellular activities smi_1425 SM00422 helix_turn_helix, mercury resistance smi_1429 SM00382 ATPases associated with a variety of cellular activities smi_1438 SM00382 ATPases associated with a variety of cellular activities smi_1439 SM00062 Bacterial periplasmic substrate-binding proteins smi_1440 SM00382 ATPases associated with a variety of cellular activities smi_1446 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family smi_1450 SM00382 ATPases associated with a variety of cellular activities smi_1453 SM00838 Elongation factor G C-terminus smi_1455 SM00450 Rhodanese Homology Domain smi_1457 SM00421 helix_turn_helix, Lux Regulon smi_1457 SM00448 cheY-homologous receiver domain smi_1460 SM00382 ATPases associated with a variety of cellular activities smi_1463 SM00382 ATPases associated with a variety of cellular activities smi_1470 SM00530 Helix-turn-helix XRE-family like proteins smi_1479 SM00894 Excalibur calcium-binding domain smi_1482 SM01208 smi_1482 smi_1484 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain smi_1484 SM00387 Histidine kinase-like ATPases smi_1485 SM00342 helix_turn_helix, arabinose operon control protein smi_1485 SM00448 cheY-homologous receiver domain smi_1494 SM00530 Helix-turn-helix XRE-family like proteins smi_1504 SM00487 DEAD-like helicases superfamily smi_1504 SM00490 helicase superfamily c-terminal domain smi_1516 SM01131 smi_1516 smi_1519 SM00316 Ribosomal protein S1-like RNA-binding domain smi_1531 SM01208 smi_1531 smi_1534 SM01208 smi_1534 smi_1543 SM00831 Cation transporter/ATPase, N-terminus smi_1545 SM00382 ATPases associated with a variety of cellular activities smi_1559 SM00382 ATPases associated with a variety of cellular activities smi_1559 SM00994 ClpX C4-type zinc finger smi_1559 SM01086 C-terminal, D2-small domain, of ClpB protein smi_1570 SM00649 Ribosomal protein L11/L12 smi_1575 SM00450 Rhodanese Homology Domain smi_1576 SM00986 Uracil DNA glycosylase superfamily smi_1576 SM00987 UreE urease accessory protein, C-terminal domain smi_1579 SM00062 Bacterial periplasmic substrate-binding proteins smi_1581 SM00465 GIY-YIG type nucleases (URI domain) smi_1586 SM00849 Metallo-beta-lactamase superfamily smi_1588 SM00382 ATPases associated with a variety of cellular activities smi_1589 SM00062 Bacterial periplasmic substrate-binding proteins smi_1592 SM00382 ATPases associated with a variety of cellular activities smi_1595 SM00840 smi_1595 smi_1598 SM00316 Ribosomal protein S1-like RNA-binding domain smi_1598 SM00322 K homology RNA-binding domain smi_1604 SM00487 DEAD-like helicases superfamily smi_1616 SM00640 Glycosyl hydrolases family 32 smi_1617 SM00354 helix_turn _helix lactose operon repressor smi_1622 SM00220 Serine/Threonine protein kinases, catalytic domain smi_1622 SM00740 smi_1622 smi_1623 SM00331 Sigma factor PP2C-like phosphatases smi_1623 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain smi_1626 SM00487 DEAD-like helicases superfamily smi_1626 SM00490 helicase superfamily c-terminal domain smi_1627 SM01409 smi_1627 smi_1628 SM00072 Guanylate kinase homologues. smi_1630 SM00322 K homology RNA-binding domain smi_1630 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. smi_1636 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. smi_1638 SM01103 smi_1638 smi_1649 SM00487 DEAD-like helicases superfamily smi_1649 SM00957 SecA DEAD-like domain smi_1649 SM00958 SecA preprotein cross-linking domain smi_1667 SM00845 GatB domain smi_1669 SM00841 Elongation factor P, C-terminal smi_1669 SM01185 smi_1669 smi_1676 SM00878 Biotin carboxylase C-terminal domain smi_1679 SM00825 Beta-ketoacyl synthase smi_1680 SM00822 smi_1680 smi_1681 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. smi_1685 SM00347 helix_turn_helix multiple antibiotic resistance protein smi_1691 SM00345 helix_turn_helix gluconate operon transcriptional repressor smi_1697 SM00342 helix_turn_helix, arabinose operon control protein smi_1698 SM00382 ATPases associated with a variety of cellular activities smi_1713 SM00857 Resolvase, N terminal domain smi_1715 SM00857 Resolvase, N terminal domain smi_1718 SM00382 ATPases associated with a variety of cellular activities smi_1729 SM00028 Tetratricopeptide repeats smi_1732 SM00530 Helix-turn-helix XRE-family like proteins smi_1733 SM00463 Small MutS-related domain smi_1733 SM00533 DNA-binding domain of DNA mismatch repair MUTS family smi_1733 SM00534 ATPase domain of DNA mismatch repair MUTS family smi_1741 SM00421 helix_turn_helix, Lux Regulon smi_1741 SM00448 cheY-homologous receiver domain smi_1742 SM00387 Histidine kinase-like ATPases smi_1749 SM00448 cheY-homologous receiver domain smi_1749 SM00862 Transcriptional regulatory protein, C terminal smi_1750 SM01350 smi_1750 smi_1752 SM00981 smi_1752 smi_1761 SM00642 Alpha-amylase domain smi_1765 SM00382 ATPases associated with a variety of cellular activities smi_1765 SM01086 C-terminal, D2-small domain, of ClpB protein smi_1767 SM00740 smi_1767 smi_1770 SM00530 Helix-turn-helix XRE-family like proteins smi_1778 SM00530 Helix-turn-helix XRE-family like proteins smi_1800 SM00382 ATPases associated with a variety of cellular activities smi_1801 SM00873 B3/4 domain smi_1801 SM00874 tRNA synthetase B5 domain smi_1801 SM00896 Ferredoxin-fold anticodon binding domain smi_1806 SM00014 Acid phosphatase homologues smi_1810 SM00382 ATPases associated with a variety of cellular activities smi_1819 SM00062 Bacterial periplasmic substrate-binding proteins smi_1820 SM00382 ATPases associated with a variety of cellular activities smi_1826 SM01120 smi_1826 smi_1826 SM01121 smi_1826 smi_1832 SM00850 LytTr DNA-binding domain smi_1833 SM00014 Acid phosphatase homologues smi_1834 SM00382 ATPases associated with a variety of cellular activities smi_1835 SM00382 ATPases associated with a variety of cellular activities smi_1836 SM00347 helix_turn_helix multiple antibiotic resistance protein smi_1839 SM00382 ATPases associated with a variety of cellular activities smi_1840 SM00852 Probable molybdopterin binding domain smi_1845 SM00562 smi_1845 smi_1846 SM00663 RNA polymerase I subunit A N-terminus smi_1848 SM00642 Alpha-amylase domain smi_1860 SM00382 ATPases associated with a variety of cellular activities smi_1869 SM00850 LytTr DNA-binding domain smi_1871 SM00382 ATPases associated with a variety of cellular activities smi_1873 SM00855 Phosphoglycerate mutase family smi_1879 SM00662 RNA polymerases D smi_1883 SM00316 Ribosomal protein S1-like RNA-binding domain smi_1894 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. smi_1895 SM01374 smi_1895 smi_1899 SM00322 K homology RNA-binding domain smi_1902 SM01382 smi_1902 smi_1902 SM01383 smi_1902 smi_1906 SM01403 smi_1906 smi_1915 SM00155 Phospholipase D. Active site motifs. smi_1919 SM00732 Likely ribonuclease with RNase H fold. smi_1923 SM00831 Cation transporter/ATPase, N-terminus smi_1925 SM00382 ATPases associated with a variety of cellular activities smi_1930 SM00278 Helix-hairpin-helix DNA-binding motif class 1 smi_1931 SM00853 MutL C terminal dimerisation domain smi_1931 SM01340 smi_1931 smi_1933 SM00850 LytTr DNA-binding domain smi_1937 SM00342 helix_turn_helix, arabinose operon control protein smi_1937 SM00448 cheY-homologous receiver domain smi_1942 SM00382 ATPases associated with a variety of cellular activities smi_1942 SM00930 smi_1942 smi_1945 SM00062 Bacterial periplasmic substrate-binding proteins smi_1946 SM00062 Bacterial periplasmic substrate-binding proteins smi_1950 SM00530 Helix-turn-helix XRE-family like proteins smi_1960 SM00849 Metallo-beta-lactamase superfamily smi_1961 SM01228 smi_1961 smi_1969 SM00062 Bacterial periplasmic substrate-binding proteins smi_1969 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. smi_1970 SM00382 ATPases associated with a variety of cellular activities smi_1973 SM00382 ATPases associated with a variety of cellular activities smi_1977 SM00530 Helix-turn-helix XRE-family like proteins smi_1978 SM00257 Lysin motif smi_1990 SM00450 Rhodanese Homology Domain smi_1998 SM00872 Alpha mannosidase, middle domain smi_1999 SM01149 smi_1999 smi_2005 SM00885 D5 N terminal like smi_2006 SM00942 Primase C terminal 1 (PriCT-1) smi_2015 SM00530 Helix-turn-helix XRE-family like proteins smi_2019 SM00812 Alpha-L-fucosidase smi_2022 SM00244 prohibitin homologues smi_2026 SM00382 ATPases associated with a variety of cellular activities smi_2027 SM00347 helix_turn_helix multiple antibiotic resistance protein smi_2027 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor smi_2045 SM00382 ATPases associated with a variety of cellular activities smi_2045 SM01086 C-terminal, D2-small domain, of ClpB protein smi_2047 SM00382 ATPases associated with a variety of cellular activities smi_2058 SM00487 DEAD-like helicases superfamily smi_2058 SM00490 helicase superfamily c-terminal domain smi_2067 SM00382 ATPases associated with a variety of cellular activities smi_2068 SM00382 ATPases associated with a variety of cellular activities smi_2075 SM00116 Domain in cystathionine beta-synthase and other proteins. smi_2075 SM01240 smi_2075 smi_2077 SM00382 ATPases associated with a variety of cellular activities smi_2083 SM00448 cheY-homologous receiver domain smi_2083 SM00850 LytTr DNA-binding domain smi_2088 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. smi_2089 SM00470 ParB-like nuclease domain