smi_0511 4257976d5e2ecbd724343f30d2944ea1 311 SUPERFAMILY SSF55681 63 246 6.76E-49 T 26-04-2016 smi_0511 4257976d5e2ecbd724343f30d2944ea1 311 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 77 307 1.4E-47 T 26-04-2016 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 smi_0511 4257976d5e2ecbd724343f30d2944ea1 311 SUPERFAMILY SSF46785 9 59 4.99E-10 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain smi_0511 4257976d5e2ecbd724343f30d2944ea1 311 SUPERFAMILY SSF50037 262 308 5.04E-6 T 26-04-2016 IPR008988 Transcriptional repressor, C-terminal smi_0511 4257976d5e2ecbd724343f30d2944ea1 311 PANTHER PTHR12835 1 307 9.5E-76 T 26-04-2016 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 smi_0511 4257976d5e2ecbd724343f30d2944ea1 311 Gene3D G3DSA:1.10.10.10 2 61 4.0E-20 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain smi_0511 4257976d5e2ecbd724343f30d2944ea1 311 Hamap MF_00978 Bifunctional ligase/repressor BirA [birA]. 6 308 31.1 T 26-04-2016 IPR030855 Bifunctional ligase/repressor BirA GO:0004077|GO:0006355 KEGG: 00780+6.3.4.15 smi_0511 4257976d5e2ecbd724343f30d2944ea1 311 Gene3D G3DSA:3.30.930.10 67 245 2.0E-49 T 26-04-2016 smi_0511 4257976d5e2ecbd724343f30d2944ea1 311 Pfam PF08279 HTH domain 6 57 2.5E-15 T 26-04-2016 IPR013196 Helix-turn-helix, type 11 smi_0511 4257976d5e2ecbd724343f30d2944ea1 311 Gene3D G3DSA:2.30.30.100 262 308 3.8E-10 T 26-04-2016 smi_0511 4257976d5e2ecbd724343f30d2944ea1 311 Pfam PF03099 Biotin/lipoate A/B protein ligase family 84 206 8.9E-16 T 26-04-2016 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 smi_0511 4257976d5e2ecbd724343f30d2944ea1 311 Pfam PF02237 Biotin protein ligase C terminal domain 262 307 9.0E-11 T 26-04-2016 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15 smi_0104 db54e2a216da3bbe926648ac62b30944 204 Pfam PF03596 Cadmium resistance transporter 12 202 1.5E-88 T 26-04-2016 IPR004676 Cadmium resistance transporter smi_0104 db54e2a216da3bbe926648ac62b30944 204 TIGRFAM TIGR00779 cad: cadmium resistance transporter family protein 13 202 7.8E-64 T 26-04-2016 IPR004676 Cadmium resistance transporter smi_1810 0f899d90db9f4d4104fddf96e6d16151 560 Gene3D G3DSA:3.40.50.300 2 238 2.1E-58 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1810 0f899d90db9f4d4104fddf96e6d16151 560 Gene3D G3DSA:3.40.50.300 296 522 2.5E-64 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1810 0f899d90db9f4d4104fddf96e6d16151 560 SUPERFAMILY SSF52540 291 525 2.56E-60 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1810 0f899d90db9f4d4104fddf96e6d16151 560 Pfam PF12558 ATP-binding cassette cobalt transporter 237 304 2.2E-16 T 26-04-2016 IPR022216 ABC cobalt transporter GO:0016820 KEGG: 00920+3.6.3.- smi_1810 0f899d90db9f4d4104fddf96e6d16151 560 SUPERFAMILY SSF52540 4 236 4.55E-52 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1810 0f899d90db9f4d4104fddf96e6d16151 560 Pfam PF00005 ABC transporter 23 173 2.6E-23 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 smi_1810 0f899d90db9f4d4104fddf96e6d16151 560 Pfam PF00005 ABC transporter 313 457 1.1E-27 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 smi_1810 0f899d90db9f4d4104fddf96e6d16151 560 PANTHER PTHR24220:SF588 7 251 1.1E-224 T 26-04-2016 smi_1810 0f899d90db9f4d4104fddf96e6d16151 560 PANTHER PTHR24220:SF588 270 417 1.1E-224 T 26-04-2016 smi_1810 0f899d90db9f4d4104fddf96e6d16151 560 ProSitePatterns PS00211 ABC transporters family signature. 429 443 - T 26-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 smi_1810 0f899d90db9f4d4104fddf96e6d16151 560 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 26-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 smi_1810 0f899d90db9f4d4104fddf96e6d16151 560 SMART SM00382 321 505 4.4E-13 T 26-04-2016 IPR003593 AAA+ ATPase domain smi_1810 0f899d90db9f4d4104fddf96e6d16151 560 SMART SM00382 32 216 2.2E-10 T 26-04-2016 IPR003593 AAA+ ATPase domain smi_1810 0f899d90db9f4d4104fddf96e6d16151 560 PANTHER PTHR24220 7 251 1.1E-224 T 26-04-2016 smi_1810 0f899d90db9f4d4104fddf96e6d16151 560 PANTHER PTHR24220 270 417 1.1E-224 T 26-04-2016 smi_0698 bfbb4dc1ec07b98a5b2ef162aae03f52 95 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 2 81 2.4E-12 T 26-04-2016 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family smi_1547 ce1a56493355ba6506ecf0b6fface4cb 255 Gene3D G3DSA:3.40.50.720 3 129 3.6E-16 T 26-04-2016 IPR016040 NAD(P)-binding domain smi_1547 ce1a56493355ba6506ecf0b6fface4cb 255 PANTHER PTHR20836 1 255 3.3E-89 T 26-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 smi_1547 ce1a56493355ba6506ecf0b6fface4cb 255 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 140 157 - T 26-04-2016 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 smi_1547 ce1a56493355ba6506ecf0b6fface4cb 255 SUPERFAMILY SSF55347 119 227 5.89E-42 T 26-04-2016 smi_1547 ce1a56493355ba6506ecf0b6fface4cb 255 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 3 255 28.448 T 26-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 smi_1547 ce1a56493355ba6506ecf0b6fface4cb 255 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 121 255 3.4E-33 T 26-04-2016 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 smi_1547 ce1a56493355ba6506ecf0b6fface4cb 255 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 3 255 3.3E-74 T 26-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 smi_1547 ce1a56493355ba6506ecf0b6fface4cb 255 SUPERFAMILY SSF51735 3 145 6.03E-38 T 26-04-2016 IPR016040 NAD(P)-binding domain smi_1547 ce1a56493355ba6506ecf0b6fface4cb 255 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 3 118 5.9E-31 T 26-04-2016 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 smi_1547 ce1a56493355ba6506ecf0b6fface4cb 255 Gene3D G3DSA:3.30.360.10 130 224 1.1E-37 T 26-04-2016 smi_1547 ce1a56493355ba6506ecf0b6fface4cb 255 PIRSF PIRSF000161 1 255 3.0E-70 T 26-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 smi_1862 602bb20c88b3d6aad7ebd9d37d00a1ff 30 Pfam PF13955 Toxin Fst, type I toxin-antitoxin system 7 26 2.7E-11 T 26-04-2016 IPR025882 Toxin Fst smi_0739 56e7c9b93cb3123e146918f4c688a5e8 423 PANTHER PTHR11751 45 351 3.6E-60 T 26-04-2016 smi_0739 56e7c9b93cb3123e146918f4c688a5e8 423 Gene3D G3DSA:1.10.10.10 2 72 1.0E-21 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain smi_0739 56e7c9b93cb3123e146918f4c688a5e8 423 SMART SM00345 10 69 3.8E-14 T 26-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 smi_0739 56e7c9b93cb3123e146918f4c688a5e8 423 Pfam PF00155 Aminotransferase class I and II 109 346 7.1E-13 T 26-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 smi_0739 56e7c9b93cb3123e146918f4c688a5e8 423 SUPERFAMILY SSF46785 2 80 4.7E-17 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain smi_0739 56e7c9b93cb3123e146918f4c688a5e8 423 Gene3D G3DSA:3.40.640.10 108 326 1.7E-52 T 26-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 smi_0739 56e7c9b93cb3123e146918f4c688a5e8 423 Pfam PF00392 Bacterial regulatory proteins, gntR family 6 69 8.0E-14 T 26-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 smi_0739 56e7c9b93cb3123e146918f4c688a5e8 423 SUPERFAMILY SSF53383 104 360 4.19E-45 T 26-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase smi_0739 56e7c9b93cb3123e146918f4c688a5e8 423 PANTHER PTHR11751:SF294 45 351 3.6E-60 T 26-04-2016 smi_0621 10059d9eafaab94ae245de1478e962b8 418 PANTHER PTHR30314 1 378 1.2E-187 T 26-04-2016 smi_0621 10059d9eafaab94ae245de1478e962b8 418 SMART SM00864 14 206 8.1E-111 T 26-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 smi_0621 10059d9eafaab94ae245de1478e962b8 418 PRINTS PR00423 Cell division protein FtsZ signature 190 212 4.9E-52 T 26-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 smi_0621 10059d9eafaab94ae245de1478e962b8 418 PRINTS PR00423 Cell division protein FtsZ signature 127 148 4.9E-52 T 26-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 smi_0621 10059d9eafaab94ae245de1478e962b8 418 PRINTS PR00423 Cell division protein FtsZ signature 99 119 4.9E-52 T 26-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 smi_0621 10059d9eafaab94ae245de1478e962b8 418 PRINTS PR00423 Cell division protein FtsZ signature 213 234 4.9E-52 T 26-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 smi_0621 10059d9eafaab94ae245de1478e962b8 418 Gene3D G3DSA:3.30.1330.20 216 322 3.5E-45 T 26-04-2016 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain smi_0621 10059d9eafaab94ae245de1478e962b8 418 SMART SM00865 208 325 7.3E-48 T 26-04-2016 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain smi_0621 10059d9eafaab94ae245de1478e962b8 418 SUPERFAMILY SSF55307 205 320 5.72E-42 T 26-04-2016 IPR008280 Tubulin/FtsZ, C-terminal smi_0621 10059d9eafaab94ae245de1478e962b8 418 Pfam PF12327 FtsZ family, C-terminal domain 223 316 1.3E-29 T 26-04-2016 IPR024757 Cell division protein FtsZ, C-terminal smi_0621 10059d9eafaab94ae245de1478e962b8 418 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 15 174 7.5E-42 T 26-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 smi_0621 10059d9eafaab94ae245de1478e962b8 418 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 10 328 7.7E-127 T 26-04-2016 IPR000158 Cell division protein FtsZ GO:0005525 smi_0621 10059d9eafaab94ae245de1478e962b8 418 SUPERFAMILY SSF52490 14 209 1.1E-67 T 26-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 smi_0621 10059d9eafaab94ae245de1478e962b8 418 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 10 410 37.814 T 26-04-2016 IPR000158 Cell division protein FtsZ GO:0005525 smi_0621 10059d9eafaab94ae245de1478e962b8 418 ProSitePatterns PS01134 FtsZ protein signature 1. 45 79 - T 26-04-2016 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 smi_0621 10059d9eafaab94ae245de1478e962b8 418 PANTHER PTHR30314:SF3 1 378 1.2E-187 T 26-04-2016 smi_0621 10059d9eafaab94ae245de1478e962b8 418 Gene3D G3DSA:3.40.50.1440 15 215 8.5E-92 T 26-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 smi_0627 09763063f12c15881a85853b27fec82a 930 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 14 834 8.3E-279 T 26-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 smi_0627 09763063f12c15881a85853b27fec82a 930 Gene3D G3DSA:3.90.740.10 205 382 1.9E-46 T 26-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 smi_0627 09763063f12c15881a85853b27fec82a 930 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 27 634 2.0E-194 T 26-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 smi_0627 09763063f12c15881a85853b27fec82a 930 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 1 916 19.229 T 26-04-2016 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5 smi_0627 09763063f12c15881a85853b27fec82a 930 Pfam PF08264 Anticodon-binding domain of tRNA 678 831 1.2E-26 T 26-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 smi_0627 09763063f12c15881a85853b27fec82a 930 SUPERFAMILY SSF47323 645 917 7.29E-71 T 26-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 smi_0627 09763063f12c15881a85853b27fec82a 930 PANTHER PTHR11946 5 249 0.0 T 26-04-2016 smi_0627 09763063f12c15881a85853b27fec82a 930 PANTHER PTHR11946 274 930 0.0 T 26-04-2016 smi_0627 09763063f12c15881a85853b27fec82a 930 Gene3D G3DSA:3.40.50.620 16 203 1.9E-136 T 26-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold smi_0627 09763063f12c15881a85853b27fec82a 930 Gene3D G3DSA:3.40.50.620 394 631 1.9E-136 T 26-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold smi_0627 09763063f12c15881a85853b27fec82a 930 PANTHER PTHR11946:SF11 5 249 0.0 T 26-04-2016 smi_0627 09763063f12c15881a85853b27fec82a 930 PANTHER PTHR11946:SF11 274 930 0.0 T 26-04-2016 smi_0627 09763063f12c15881a85853b27fec82a 930 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 520 533 3.8E-27 T 26-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 smi_0627 09763063f12c15881a85853b27fec82a 930 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 554 563 3.8E-27 T 26-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 smi_0627 09763063f12c15881a85853b27fec82a 930 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 50 61 3.8E-27 T 26-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 smi_0627 09763063f12c15881a85853b27fec82a 930 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 228 251 3.8E-27 T 26-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 smi_0627 09763063f12c15881a85853b27fec82a 930 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 392 407 3.8E-27 T 26-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 smi_0627 09763063f12c15881a85853b27fec82a 930 SUPERFAMILY SSF52374 1 200 5.86E-151 T 26-04-2016 smi_0627 09763063f12c15881a85853b27fec82a 930 SUPERFAMILY SSF52374 394 641 5.86E-151 T 26-04-2016 smi_0627 09763063f12c15881a85853b27fec82a 930 SUPERFAMILY SSF50677 202 394 3.4E-42 T 26-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 smi_0627 09763063f12c15881a85853b27fec82a 930 Pfam PF06827 Zinc finger found in FPG and IleRS 885 913 2.3E-6 T 26-04-2016 IPR010663 Zinc finger, FPG/IleRS-type smi_0627 09763063f12c15881a85853b27fec82a 930 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 57 68 - T 26-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 smi_0627 09763063f12c15881a85853b27fec82a 930 Gene3D G3DSA:1.10.730.10 634 818 1.1E-43 T 26-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 smi_0286 f663c72e094ebb370624e219c6a0a04f 463 ProSitePatterns PS01229 Hypothetical cof family signature 2. 227 249 - T 26-04-2016 smi_0286 f663c72e094ebb370624e219c6a0a04f 463 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 295 407 2.0E-28 T 26-04-2016 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31|UniPathway: UPA00031 smi_0286 f663c72e094ebb370624e219c6a0a04f 463 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 273 4.4E-64 T 26-04-2016 IPR023214 HAD-like domain smi_0286 f663c72e094ebb370624e219c6a0a04f 463 PANTHER PTHR10000 1 279 1.5E-138 T 26-04-2016 smi_0286 f663c72e094ebb370624e219c6a0a04f 463 ProSitePatterns PS01228 Hypothetical cof family signature 1. 5 16 - T 26-04-2016 IPR000150 Cof protein GO:0016787 smi_0286 f663c72e094ebb370624e219c6a0a04f 463 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 6 246 8.9E-21 T 26-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 smi_0286 f663c72e094ebb370624e219c6a0a04f 463 SUPERFAMILY SSF56784 1 276 1.77E-64 T 26-04-2016 IPR023214 HAD-like domain smi_0286 f663c72e094ebb370624e219c6a0a04f 463 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 6 273 7.3E-52 T 26-04-2016 IPR000150 Cof protein GO:0016787 smi_0286 f663c72e094ebb370624e219c6a0a04f 463 Gene3D G3DSA:3.40.50.1000 182 277 3.1E-54 T 26-04-2016 IPR023214 HAD-like domain smi_0286 f663c72e094ebb370624e219c6a0a04f 463 Gene3D G3DSA:3.40.50.1000 1 72 3.1E-54 T 26-04-2016 IPR023214 HAD-like domain smi_0286 f663c72e094ebb370624e219c6a0a04f 463 Gene3D G3DSA:1.10.3420.10 286 453 1.4E-58 T 26-04-2016 IPR023292 NTP pyrophosphohydrolase-like domain smi_0286 f663c72e094ebb370624e219c6a0a04f 463 PANTHER PTHR10000:SF25 1 279 1.5E-138 T 26-04-2016 smi_0286 f663c72e094ebb370624e219c6a0a04f 463 PIRSF PIRSF037492 1 459 5.1E-246 T 26-04-2016 IPR017223 Predicted hydrolase of the HAD superfamily, SPs0319-type smi_1544 c155852c695d9d7b026164039b2e0872 394 SUPERFAMILY SSF161111 8 209 1.96E-49 T 26-04-2016 smi_1544 c155852c695d9d7b026164039b2e0872 394 SUPERFAMILY SSF54427 315 391 2.45E-5 T 26-04-2016 IPR032710 NTF2-like domain smi_1544 c155852c695d9d7b026164039b2e0872 394 PANTHER PTHR11562 11 298 4.0E-74 T 26-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 smi_1544 c155852c695d9d7b026164039b2e0872 394 Gene3D G3DSA:3.30.70.1350 209 288 4.3E-25 T 26-04-2016 IPR027470 Cation efflux protein, cytoplasmic domain smi_1544 c155852c695d9d7b026164039b2e0872 394 Gene3D G3DSA:1.20.1510.10 13 207 1.5E-43 T 26-04-2016 IPR027469 Cation efflux protein transmembrane domain smi_1544 c155852c695d9d7b026164039b2e0872 394 SUPERFAMILY SSF160240 211 289 3.4E-18 T 26-04-2016 smi_1544 c155852c695d9d7b026164039b2e0872 394 Pfam PF01545 Cation efflux family 16 207 5.7E-49 T 26-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 smi_1544 c155852c695d9d7b026164039b2e0872 394 Pfam PF16916 Dimerisation domain of Zinc Transporter 213 288 1.9E-17 T 26-04-2016 IPR027470 Cation efflux protein, cytoplasmic domain smi_1544 c155852c695d9d7b026164039b2e0872 394 PANTHER PTHR11562:SF18 11 298 4.0E-74 T 26-04-2016 smi_1544 c155852c695d9d7b026164039b2e0872 394 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 12 288 3.5E-58 T 26-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 smi_1674 4f9078b0a86b83c194ae388c990dfc0e 255 Gene3D G3DSA:3.90.226.10 7 214 5.1E-46 T 26-04-2016 IPR029045 ClpP/crotonase-like domain smi_1674 4f9078b0a86b83c194ae388c990dfc0e 255 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 5 94 1.6E-36 T 26-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 smi_1674 4f9078b0a86b83c194ae388c990dfc0e 255 PANTHER PTHR22855:SF42 1 255 5.2E-88 T 26-04-2016 smi_1674 4f9078b0a86b83c194ae388c990dfc0e 255 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 5 255 3.7E-101 T 26-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 smi_1674 4f9078b0a86b83c194ae388c990dfc0e 255 PANTHER PTHR22855 1 255 5.2E-88 T 26-04-2016 smi_1674 4f9078b0a86b83c194ae388c990dfc0e 255 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 99 112 1.4E-42 T 26-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 smi_1674 4f9078b0a86b83c194ae388c990dfc0e 255 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 34 45 1.4E-42 T 26-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 smi_1674 4f9078b0a86b83c194ae388c990dfc0e 255 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 115 128 1.4E-42 T 26-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 smi_1674 4f9078b0a86b83c194ae388c990dfc0e 255 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 143 152 1.4E-42 T 26-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 smi_1674 4f9078b0a86b83c194ae388c990dfc0e 255 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 80 96 1.4E-42 T 26-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 smi_1674 4f9078b0a86b83c194ae388c990dfc0e 255 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 59 77 1.4E-42 T 26-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 smi_1674 4f9078b0a86b83c194ae388c990dfc0e 255 SUPERFAMILY SSF52096 4 254 1.38E-78 T 26-04-2016 IPR029045 ClpP/crotonase-like domain smi_1403 694b85ef3426e02d92f820c51d814f05 271 SUPERFAMILY SSF56219 1 265 4.19E-36 T 26-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase smi_1403 694b85ef3426e02d92f820c51d814f05 271 PANTHER PTHR15822 1 271 2.4E-26 T 26-04-2016 smi_1403 694b85ef3426e02d92f820c51d814f05 271 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 5 261 5.8E-18 T 26-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase smi_1403 694b85ef3426e02d92f820c51d814f05 271 PANTHER PTHR15822:SF7 1 271 2.4E-26 T 26-04-2016 smi_1403 694b85ef3426e02d92f820c51d814f05 271 Gene3D G3DSA:3.60.10.10 1 266 2.2E-25 T 26-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase smi_1867 270933e464c57f0d76d1028fc35010a5 231 PANTHER PTHR13256:SF22 7 221 2.9E-92 T 26-04-2016 smi_1867 270933e464c57f0d76d1028fc35010a5 231 PANTHER PTHR13256 7 221 2.9E-92 T 26-04-2016 smi_1867 270933e464c57f0d76d1028fc35010a5 231 Gene3D G3DSA:3.40.630.30 23 214 1.8E-53 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase smi_1867 270933e464c57f0d76d1028fc35010a5 231 SUPERFAMILY SSF55729 27 198 9.61E-39 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase smi_1867 270933e464c57f0d76d1028fc35010a5 231 Pfam PF13302 Acetyltransferase (GNAT) domain 41 173 1.3E-14 T 26-04-2016 IPR000182 GNAT domain GO:0008080 smi_1748 34e6bf03bb9fb5257de3530796ab022e 313 SUPERFAMILY SSF69360 36 312 1.11E-54 T 26-04-2016 smi_1748 34e6bf03bb9fb5257de3530796ab022e 313 Gene3D G3DSA:2.10.270.10 37 117 6.9E-12 T 26-04-2016 smi_1748 34e6bf03bb9fb5257de3530796ab022e 313 Gene3D G3DSA:2.20.120.10 243 288 6.7E-19 T 26-04-2016 smi_1748 34e6bf03bb9fb5257de3530796ab022e 313 Gene3D G3DSA:2.20.120.10 162 176 8.8E-6 T 26-04-2016 smi_1748 34e6bf03bb9fb5257de3530796ab022e 313 Gene3D G3DSA:2.20.120.10 195 242 4.8E-21 T 26-04-2016 smi_1748 34e6bf03bb9fb5257de3530796ab022e 313 Pfam PF01473 Putative cell wall binding repeat 276 293 1.5E-4 T 26-04-2016 IPR018337 Cell wall/choline-binding repeat smi_1748 34e6bf03bb9fb5257de3530796ab022e 313 Pfam PF01473 Putative cell wall binding repeat 105 114 0.018 T 26-04-2016 IPR018337 Cell wall/choline-binding repeat smi_1748 34e6bf03bb9fb5257de3530796ab022e 313 Pfam PF01473 Putative cell wall binding repeat 235 254 8.1E-4 T 26-04-2016 IPR018337 Cell wall/choline-binding repeat smi_1748 34e6bf03bb9fb5257de3530796ab022e 313 Pfam PF01473 Putative cell wall binding repeat 215 233 1.1E-7 T 26-04-2016 IPR018337 Cell wall/choline-binding repeat smi_1748 34e6bf03bb9fb5257de3530796ab022e 313 Pfam PF01473 Putative cell wall binding repeat 195 207 0.0034 T 26-04-2016 IPR018337 Cell wall/choline-binding repeat smi_1748 34e6bf03bb9fb5257de3530796ab022e 313 Pfam PF01473 Putative cell wall binding repeat 256 274 3.5E-6 T 26-04-2016 IPR018337 Cell wall/choline-binding repeat smi_1748 34e6bf03bb9fb5257de3530796ab022e 313 Pfam PF01473 Putative cell wall binding repeat 162 178 0.0014 T 26-04-2016 IPR018337 Cell wall/choline-binding repeat smi_1184 607d0f64f0fffe8af11bc0540aff39d8 319 Gene3D G3DSA:3.40.50.2020 2 163 3.0E-75 T 26-04-2016 IPR029057 Phosphoribosyltransferase-like smi_1184 607d0f64f0fffe8af11bc0540aff39d8 319 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 7 123 8.4E-49 T 26-04-2016 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 smi_1184 607d0f64f0fffe8af11bc0540aff39d8 319 PANTHER PTHR10210:SF41 1 319 2.8E-164 T 26-04-2016 smi_1184 607d0f64f0fffe8af11bc0540aff39d8 319 Hamap MF_00583_B Ribose-phosphate pyrophosphokinase [prs]. 7 314 43.45 T 26-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 smi_1184 607d0f64f0fffe8af11bc0540aff39d8 319 Pfam PF14572 Phosphoribosyl synthetase-associated domain 209 313 1.1E-21 T 26-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 smi_1184 607d0f64f0fffe8af11bc0540aff39d8 319 Gene3D G3DSA:3.40.50.2020 164 284 3.0E-38 T 26-04-2016 IPR029057 Phosphoribosyltransferase-like smi_1184 607d0f64f0fffe8af11bc0540aff39d8 319 SUPERFAMILY SSF53271 5 158 5.1E-54 T 26-04-2016 IPR029057 Phosphoribosyltransferase-like smi_1184 607d0f64f0fffe8af11bc0540aff39d8 319 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 7 313 2.5E-102 T 26-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 smi_1184 607d0f64f0fffe8af11bc0540aff39d8 319 PANTHER PTHR10210 1 319 2.8E-164 T 26-04-2016 smi_1184 607d0f64f0fffe8af11bc0540aff39d8 319 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 131 146 - T 26-04-2016 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: REACT_474|UniPathway: UPA00087 smi_1184 607d0f64f0fffe8af11bc0540aff39d8 319 SMART SM01400 7 123 1.3E-75 T 26-04-2016 smi_1184 607d0f64f0fffe8af11bc0540aff39d8 319 SUPERFAMILY SSF53271 109 305 5.52E-44 T 26-04-2016 IPR029057 Phosphoribosyltransferase-like smi_0796 1d62da24bc75cad0ffcf8291a5d068c1 152 Pfam PF04074 Domain of unknown function (DUF386) 1 147 1.3E-37 T 26-04-2016 IPR004375 YhcH/YjgK/YiaL family smi_0796 1d62da24bc75cad0ffcf8291a5d068c1 152 Gene3D G3DSA:2.60.120.370 1 148 1.3E-40 T 26-04-2016 IPR004375 YhcH/YjgK/YiaL family smi_0796 1d62da24bc75cad0ffcf8291a5d068c1 152 PANTHER PTHR34986 2 148 6.2E-41 T 26-04-2016 smi_0796 1d62da24bc75cad0ffcf8291a5d068c1 152 SUPERFAMILY SSF51197 1 149 4.39E-37 T 26-04-2016 smi_0796 1d62da24bc75cad0ffcf8291a5d068c1 152 TIGRFAM TIGR00022 TIGR00022: YhcH/YjgK/YiaL family protein 1 148 2.4E-42 T 26-04-2016 IPR004375 YhcH/YjgK/YiaL family smi_0404 02ca18b4745712d72e11ff1af0f60343 105 Gene3D G3DSA:3.40.30.10 6 102 1.6E-19 T 26-04-2016 IPR012336 Thioredoxin-like fold smi_0404 02ca18b4745712d72e11ff1af0f60343 105 SUPERFAMILY SSF52833 1 102 3.51E-23 T 26-04-2016 IPR012336 Thioredoxin-like fold smi_0404 02ca18b4745712d72e11ff1af0f60343 105 PANTHER PTHR10438 1 104 4.1E-55 T 26-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 smi_0404 02ca18b4745712d72e11ff1af0f60343 105 PANTHER PTHR10438:SF301 1 104 4.1E-55 T 26-04-2016 smi_0404 02ca18b4745712d72e11ff1af0f60343 105 Pfam PF00085 Thioredoxin 11 101 4.9E-15 T 26-04-2016 IPR013766 Thioredoxin domain GO:0045454 smi_0589 821ecc429fde9b8fe78bc9e6ac7d01af 837 SUPERFAMILY SSF52540 349 396 2.06E-75 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0589 821ecc429fde9b8fe78bc9e6ac7d01af 837 Gene3D G3DSA:1.10.3060.10 599 779 4.6E-48 T 26-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 smi_0589 821ecc429fde9b8fe78bc9e6ac7d01af 837 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 28 497 5.7E-225 T 26-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 smi_0589 821ecc429fde9b8fe78bc9e6ac7d01af 837 PRINTS PR00906 SecA protein signature 320 342 3.8E-69 T 26-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 smi_0589 821ecc429fde9b8fe78bc9e6ac7d01af 837 PRINTS PR00906 SecA protein signature 394 407 3.8E-69 T 26-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 smi_0589 821ecc429fde9b8fe78bc9e6ac7d01af 837 PRINTS PR00906 SecA protein signature 99 113 3.8E-69 T 26-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 smi_0589 821ecc429fde9b8fe78bc9e6ac7d01af 837 PRINTS PR00906 SecA protein signature 61 85 3.8E-69 T 26-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 smi_0589 821ecc429fde9b8fe78bc9e6ac7d01af 837 PRINTS PR00906 SecA protein signature 115 125 3.8E-69 T 26-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 smi_0589 821ecc429fde9b8fe78bc9e6ac7d01af 837 PRINTS PR00906 SecA protein signature 357 374 3.8E-69 T 26-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 smi_0589 821ecc429fde9b8fe78bc9e6ac7d01af 837 PRINTS PR00906 SecA protein signature 168 188 3.8E-69 T 26-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 smi_0589 821ecc429fde9b8fe78bc9e6ac7d01af 837 SMART SM00957 5 383 4.3E-259 T 26-04-2016 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 smi_0589 821ecc429fde9b8fe78bc9e6ac7d01af 837 Gene3D G3DSA:3.40.50.300 7 226 8.5E-111 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0589 821ecc429fde9b8fe78bc9e6ac7d01af 837 Gene3D G3DSA:3.40.50.300 350 397 8.5E-111 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0589 821ecc429fde9b8fe78bc9e6ac7d01af 837 Gene3D G3DSA:3.90.1440.10 231 349 1.2E-42 T 26-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 smi_0589 821ecc429fde9b8fe78bc9e6ac7d01af 837 Hamap MF_01382 Protein translocase subunit SecA [secA]. 3 780 19.112 T 26-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 smi_0589 821ecc429fde9b8fe78bc9e6ac7d01af 837 SUPERFAMILY SSF81886 571 825 2.75E-70 T 26-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 smi_0589 821ecc429fde9b8fe78bc9e6ac7d01af 837 ProSitePatterns PS01312 SecA family signature. 481 496 - T 26-04-2016 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 smi_0589 821ecc429fde9b8fe78bc9e6ac7d01af 837 PANTHER PTHR30612 1 837 0.0 T 26-04-2016 smi_0589 821ecc429fde9b8fe78bc9e6ac7d01af 837 Gene3D G3DSA:3.40.50.300 398 569 1.3E-76 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0589 821ecc429fde9b8fe78bc9e6ac7d01af 837 SUPERFAMILY SSF52540 11 226 2.06E-75 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0589 821ecc429fde9b8fe78bc9e6ac7d01af 837 SUPERFAMILY SSF81767 231 349 4.58E-41 T 26-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 smi_0589 821ecc429fde9b8fe78bc9e6ac7d01af 837 SUPERFAMILY SSF52540 397 566 3.31E-51 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0589 821ecc429fde9b8fe78bc9e6ac7d01af 837 Pfam PF07516 SecA Wing and Scaffold domain 568 777 2.8E-57 T 26-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 smi_0589 821ecc429fde9b8fe78bc9e6ac7d01af 837 Pfam PF01043 SecA preprotein cross-linking domain 231 339 1.6E-34 T 26-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 smi_0589 821ecc429fde9b8fe78bc9e6ac7d01af 837 SMART SM00958 227 339 9.1E-55 T 26-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 smi_0589 821ecc429fde9b8fe78bc9e6ac7d01af 837 Pfam PF02810 SEC-C motif 817 835 1.2E-9 T 26-04-2016 IPR004027 SEC-C motif smi_0589 821ecc429fde9b8fe78bc9e6ac7d01af 837 Pfam PF07517 SecA DEAD-like domain 9 383 1.3E-121 T 26-04-2016 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 smi_0401 7600ee660b48feb460cbf97e995648c2 535 Pfam PF00117 Glutamine amidotransferase class-I 303 528 5.9E-57 T 26-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 smi_0401 7600ee660b48feb460cbf97e995648c2 535 SUPERFAMILY SSF52540 3 271 6.44E-124 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0401 7600ee660b48feb460cbf97e995648c2 535 Pfam PF06418 CTP synthase N-terminus 4 268 4.0E-128 T 26-04-2016 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 smi_0401 7600ee660b48feb460cbf97e995648c2 535 Gene3D G3DSA:3.40.50.300 1 285 5.3E-139 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0401 7600ee660b48feb460cbf97e995648c2 535 Hamap MF_01227 CTP synthase [pyrG]. 3 534 51.465 T 26-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 smi_0401 7600ee660b48feb460cbf97e995648c2 535 PANTHER PTHR11550 1 532 0.0 T 26-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 smi_0401 7600ee660b48feb460cbf97e995648c2 535 Gene3D G3DSA:3.40.50.880 289 533 8.2E-96 T 26-04-2016 IPR029062 Class I glutamine amidotransferase-like smi_0401 7600ee660b48feb460cbf97e995648c2 535 TIGRFAM TIGR00337 PyrG: CTP synthase 2 529 7.3E-251 T 26-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 smi_0401 7600ee660b48feb460cbf97e995648c2 535 SUPERFAMILY SSF52317 290 533 1.07E-75 T 26-04-2016 IPR029062 Class I glutamine amidotransferase-like smi_0819 fb26cc643f4e954196740f72503fe8d4 361 Pfam PF04055 Radical SAM superfamily 105 276 1.2E-15 T 26-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 smi_0819 fb26cc643f4e954196740f72503fe8d4 361 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 2 349 70.579 T 26-04-2016 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 smi_0819 fb26cc643f4e954196740f72503fe8d4 361 Pfam PF13394 4Fe-4S single cluster domain 110 204 4.2E-8 T 26-04-2016 smi_0819 fb26cc643f4e954196740f72503fe8d4 361 SUPERFAMILY SSF102114 97 308 9.03E-15 T 26-04-2016 smi_0819 fb26cc643f4e954196740f72503fe8d4 361 PIRSF PIRSF006004 1 360 5.4E-137 T 26-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 smi_0819 fb26cc643f4e954196740f72503fe8d4 361 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 1 350 1.2E-136 T 26-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 smi_0819 fb26cc643f4e954196740f72503fe8d4 361 Gene3D G3DSA:3.20.20.70 96 333 1.2E-16 T 26-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 smi_0819 fb26cc643f4e954196740f72503fe8d4 361 PANTHER PTHR30544:SF5 2 355 5.6E-176 T 26-04-2016 smi_0819 fb26cc643f4e954196740f72503fe8d4 361 PANTHER PTHR30544 2 355 5.6E-176 T 26-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 smi_1689 56bb46b1e6473058aa7ed4c93aa4059a 424 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 108 1.6E-32 T 26-04-2016 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|UniPathway: UPA00906 smi_1689 56bb46b1e6473058aa7ed4c93aa4059a 424 Gene3D G3DSA:3.30.930.10 106 420 3.9E-145 T 26-04-2016 smi_1689 56bb46b1e6473058aa7ed4c93aa4059a 424 PRINTS PR00981 Seryl-tRNA synthetase signature 263 275 2.8E-33 T 26-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 smi_1689 56bb46b1e6473058aa7ed4c93aa4059a 424 PRINTS PR00981 Seryl-tRNA synthetase signature 350 366 2.8E-33 T 26-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 smi_1689 56bb46b1e6473058aa7ed4c93aa4059a 424 PRINTS PR00981 Seryl-tRNA synthetase signature 332 348 2.8E-33 T 26-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 smi_1689 56bb46b1e6473058aa7ed4c93aa4059a 424 PRINTS PR00981 Seryl-tRNA synthetase signature 315 328 2.8E-33 T 26-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 smi_1689 56bb46b1e6473058aa7ed4c93aa4059a 424 PRINTS PR00981 Seryl-tRNA synthetase signature 275 288 2.8E-33 T 26-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 smi_1689 56bb46b1e6473058aa7ed4c93aa4059a 424 Gene3D G3DSA:1.10.287.40 1 105 1.3E-25 T 26-04-2016 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|UniPathway: UPA00906 smi_1689 56bb46b1e6473058aa7ed4c93aa4059a 424 SUPERFAMILY SSF46589 1 113 3.3E-31 T 26-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 smi_1689 56bb46b1e6473058aa7ed4c93aa4059a 424 PIRSF PIRSF001529 1 424 1.5E-184 T 26-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 smi_1689 56bb46b1e6473058aa7ed4c93aa4059a 424 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 416 6.4E-175 T 26-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 smi_1689 56bb46b1e6473058aa7ed4c93aa4059a 424 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 421 42.954 T 26-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 smi_1689 56bb46b1e6473058aa7ed4c93aa4059a 424 PANTHER PTHR11778 1 424 2.4E-222 T 26-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 smi_1689 56bb46b1e6473058aa7ed4c93aa4059a 424 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 222 399 7.7E-37 T 26-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 smi_1689 56bb46b1e6473058aa7ed4c93aa4059a 424 SUPERFAMILY SSF55681 117 419 1.68E-109 T 26-04-2016 smi_1316 7eb603c46da9af54aa57c00a245d4f66 428 ProSitePatterns PS01276 Peptidase family U32 signature. 165 183 - T 26-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- smi_1316 7eb603c46da9af54aa57c00a245d4f66 428 PANTHER PTHR30217:SF6 1 428 9.1E-233 T 26-04-2016 smi_1316 7eb603c46da9af54aa57c00a245d4f66 428 PANTHER PTHR30217 1 428 9.1E-233 T 26-04-2016 smi_1316 7eb603c46da9af54aa57c00a245d4f66 428 Pfam PF01136 Peptidase family U32 84 312 4.7E-87 T 26-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- smi_1316 7eb603c46da9af54aa57c00a245d4f66 428 Pfam PF16325 Peptidase family U32 C-terminal domain 326 407 1.4E-22 T 26-04-2016 IPR032525 Peptidase family U32, C-terminal KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- smi_1066 45db251cfc17c3c935dd79023e946f3c 1216 SUPERFAMILY SSF52980 1010 1196 2.52E-24 T 26-04-2016 IPR011335 Restriction endonuclease type II-like smi_1066 45db251cfc17c3c935dd79023e946f3c 1216 Gene3D G3DSA:1.10.486.10 617 767 7.9E-22 T 26-04-2016 smi_1066 45db251cfc17c3c935dd79023e946f3c 1216 Pfam PF00580 UvrD/REP helicase N-terminal domain 29 469 8.6E-80 T 26-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 smi_1066 45db251cfc17c3c935dd79023e946f3c 1216 PANTHER PTHR11070 29 205 0.0 T 26-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 smi_1066 45db251cfc17c3c935dd79023e946f3c 1216 PANTHER PTHR11070 553 751 0.0 T 26-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 smi_1066 45db251cfc17c3c935dd79023e946f3c 1216 PANTHER PTHR11070 768 830 0.0 T 26-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 smi_1066 45db251cfc17c3c935dd79023e946f3c 1216 PANTHER PTHR11070 337 537 0.0 T 26-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 smi_1066 45db251cfc17c3c935dd79023e946f3c 1216 PANTHER PTHR11070 875 1207 0.0 T 26-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 smi_1066 45db251cfc17c3c935dd79023e946f3c 1216 PANTHER PTHR11070:SF14 29 205 0.0 T 26-04-2016 smi_1066 45db251cfc17c3c935dd79023e946f3c 1216 PANTHER PTHR11070:SF14 553 751 0.0 T 26-04-2016 smi_1066 45db251cfc17c3c935dd79023e946f3c 1216 PANTHER PTHR11070:SF14 768 830 0.0 T 26-04-2016 smi_1066 45db251cfc17c3c935dd79023e946f3c 1216 PANTHER PTHR11070:SF14 337 537 0.0 T 26-04-2016 smi_1066 45db251cfc17c3c935dd79023e946f3c 1216 PANTHER PTHR11070:SF14 875 1207 0.0 T 26-04-2016 smi_1066 45db251cfc17c3c935dd79023e946f3c 1216 Gene3D G3DSA:3.40.50.300 372 471 1.8E-64 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1066 45db251cfc17c3c935dd79023e946f3c 1216 Gene3D G3DSA:3.40.50.300 123 186 1.8E-64 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1066 45db251cfc17c3c935dd79023e946f3c 1216 Gene3D G3DSA:3.40.50.300 28 91 1.8E-64 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1066 45db251cfc17c3c935dd79023e946f3c 1216 Hamap MF_01451 ATP-dependent helicase/nuclease subunit A [addA]. 25 1214 16.439 T 26-04-2016 IPR014152 DNA helicase subunit AddA GO:0004003|GO:0006302 smi_1066 45db251cfc17c3c935dd79023e946f3c 1216 TIGRFAM TIGR02785 addA_Gpos: helicase-exonuclease AddAB, AddA subunit 27 1213 0.0 T 26-04-2016 IPR014152 DNA helicase subunit AddA GO:0004003|GO:0006302 smi_1066 45db251cfc17c3c935dd79023e946f3c 1216 Gene3D G3DSA:3.90.320.10 1048 1196 2.3E-14 T 26-04-2016 IPR011604 Exonuclease, phage-type/RecB, C-terminal GO:0003677|GO:0004518 smi_1066 45db251cfc17c3c935dd79023e946f3c 1216 Pfam PF13361 UvrD-like helicase C-terminal domain 479 896 2.9E-32 T 26-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 smi_1066 45db251cfc17c3c935dd79023e946f3c 1216 SUPERFAMILY SSF52540 362 822 2.84E-118 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1066 45db251cfc17c3c935dd79023e946f3c 1216 SUPERFAMILY SSF52540 29 169 2.84E-118 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1066 45db251cfc17c3c935dd79023e946f3c 1216 SUPERFAMILY SSF52540 876 902 2.84E-118 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1066 45db251cfc17c3c935dd79023e946f3c 1216 Gene3D G3DSA:3.40.50.300 783 935 2.2E-59 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1066 45db251cfc17c3c935dd79023e946f3c 1216 Gene3D G3DSA:3.40.50.300 483 606 2.2E-59 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1066 45db251cfc17c3c935dd79023e946f3c 1216 Pfam PF12705 PD-(D/E)XK nuclease superfamily 1054 1193 9.3E-6 T 26-04-2016 smi_0838 e462aaa56a0657463bd8418c6309a9e0 448 SUPERFAMILY SSF55424 334 448 7.73E-37 T 26-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 smi_0838 e462aaa56a0657463bd8418c6309a9e0 448 TIGRFAM TIGR01421 gluta_reduc_1: glutathione-disulfide reductase 2 448 8.3E-240 T 26-04-2016 IPR006322 Glutathione reductase, eukaryote/bacterial GO:0004362|GO:0006749|GO:0050660|GO:0050661|GO:0055114 KEGG: 00480+1.8.1.7|MetaCyc: PWY-4081 smi_0838 e462aaa56a0657463bd8418c6309a9e0 448 PANTHER PTHR22912 1 448 2.3E-233 T 26-04-2016 smi_0838 e462aaa56a0657463bd8418c6309a9e0 448 Gene3D G3DSA:3.50.50.60 269 325 7.1E-70 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 smi_0838 e462aaa56a0657463bd8418c6309a9e0 448 Gene3D G3DSA:3.50.50.60 3 141 7.1E-70 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 smi_0838 e462aaa56a0657463bd8418c6309a9e0 448 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 38 48 - T 26-04-2016 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 smi_0838 e462aaa56a0657463bd8418c6309a9e0 448 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 4 316 3.5E-64 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 smi_0838 e462aaa56a0657463bd8418c6309a9e0 448 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 168 193 4.7E-64 T 26-04-2016 smi_0838 e462aaa56a0657463bd8418c6309a9e0 448 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 134 143 4.7E-64 T 26-04-2016 smi_0838 e462aaa56a0657463bd8418c6309a9e0 448 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 422 442 4.7E-64 T 26-04-2016 smi_0838 e462aaa56a0657463bd8418c6309a9e0 448 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 400 415 4.7E-64 T 26-04-2016 smi_0838 e462aaa56a0657463bd8418c6309a9e0 448 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 296 303 4.7E-64 T 26-04-2016 smi_0838 e462aaa56a0657463bd8418c6309a9e0 448 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 37 52 4.7E-64 T 26-04-2016 smi_0838 e462aaa56a0657463bd8418c6309a9e0 448 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 253 267 4.7E-64 T 26-04-2016 smi_0838 e462aaa56a0657463bd8418c6309a9e0 448 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 4.7E-64 T 26-04-2016 smi_0838 e462aaa56a0657463bd8418c6309a9e0 448 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 333 354 4.7E-64 T 26-04-2016 smi_0838 e462aaa56a0657463bd8418c6309a9e0 448 Gene3D G3DSA:3.30.390.30 326 448 2.4E-43 T 26-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 smi_0838 e462aaa56a0657463bd8418c6309a9e0 448 SUPERFAMILY SSF51905 2 357 6.62E-58 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 smi_0838 e462aaa56a0657463bd8418c6309a9e0 448 PANTHER PTHR22912:SF106 1 448 2.3E-233 T 26-04-2016 smi_0838 e462aaa56a0657463bd8418c6309a9e0 448 PIRSF PIRSF000350 1 444 8.0E-81 T 26-04-2016 smi_0838 e462aaa56a0657463bd8418c6309a9e0 448 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 281 303 1.6E-27 T 26-04-2016 smi_0838 e462aaa56a0657463bd8418c6309a9e0 448 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 131 149 1.6E-27 T 26-04-2016 smi_0838 e462aaa56a0657463bd8418c6309a9e0 448 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 1.6E-27 T 26-04-2016 smi_0838 e462aaa56a0657463bd8418c6309a9e0 448 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 168 186 1.6E-27 T 26-04-2016 smi_0838 e462aaa56a0657463bd8418c6309a9e0 448 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 252 268 1.6E-27 T 26-04-2016 smi_0838 e462aaa56a0657463bd8418c6309a9e0 448 Gene3D G3DSA:3.50.50.60 142 268 7.2E-31 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 smi_0838 e462aaa56a0657463bd8418c6309a9e0 448 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 337 447 1.3E-36 T 26-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 smi_1303 ac4e906160a6e79e1869edf0b4e54871 388 Pfam PF13936 Helix-turn-helix domain 4 47 1.4E-16 T 26-04-2016 IPR025246 Transposase IS30-like HTH domain smi_1303 ac4e906160a6e79e1869edf0b4e54871 388 Gene3D G3DSA:3.30.420.10 209 358 9.8E-6 T 26-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 smi_1303 ac4e906160a6e79e1869edf0b4e54871 388 SUPERFAMILY SSF53098 207 358 1.97E-9 T 26-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 smi_1303 ac4e906160a6e79e1869edf0b4e54871 388 PANTHER PTHR10948 1 372 4.8E-16 T 26-04-2016 smi_0011 833acf6fd6f4c242f201e8665f29f50d 180 PANTHER PTHR22573 4 180 1.7E-82 T 26-04-2016 smi_0011 833acf6fd6f4c242f201e8665f29f50d 180 Gene3D G3DSA:3.40.50.2020 2 179 2.4E-81 T 26-04-2016 IPR029057 Phosphoribosyltransferase-like smi_0011 833acf6fd6f4c242f201e8665f29f50d 180 SUPERFAMILY SSF53271 3 178 1.18E-57 T 26-04-2016 IPR029057 Phosphoribosyltransferase-like smi_0011 833acf6fd6f4c242f201e8665f29f50d 180 PANTHER PTHR22573:SF56 4 180 1.7E-82 T 26-04-2016 smi_0011 833acf6fd6f4c242f201e8665f29f50d 180 TIGRFAM TIGR01203 HGPRTase: hypoxanthine phosphoribosyltransferase 9 174 3.5E-63 T 26-04-2016 IPR005904 Hypoxanthine phosphoribosyl transferase GO:0004422|GO:0005737|GO:0006166 KEGG: 00230+2.4.2.8|KEGG: 00983+2.4.2.8|MetaCyc: PWY-6599|MetaCyc: PWY-6609|MetaCyc: PWY-6610|MetaCyc: PWY-6620|UniPathway: UPA00591 smi_0011 833acf6fd6f4c242f201e8665f29f50d 180 Pfam PF00156 Phosphoribosyl transferase domain 12 160 1.1E-28 T 26-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 smi_0098 7e55b92cd8b91872fcd414dd65f70cf9 122 Pfam PF14206 Cysteine-rich CPCC 17 61 1.2E-8 T 26-04-2016 IPR025983 Cysteine-rich CPCC domain smi_1290 702181277adee3732d812d19389f318b 181 PANTHER PTHR11839 1 179 1.8E-59 T 26-04-2016 smi_1290 702181277adee3732d812d19389f318b 181 Pfam PF00293 NUDIX domain 44 158 2.5E-14 T 26-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 smi_1290 702181277adee3732d812d19389f318b 181 Gene3D G3DSA:3.90.79.10 5 180 1.2E-55 T 26-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 smi_1290 702181277adee3732d812d19389f318b 181 SUPERFAMILY SSF55811 6 180 3.79E-45 T 26-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 smi_1290 702181277adee3732d812d19389f318b 181 PANTHER PTHR11839:SF9 1 179 1.8E-59 T 26-04-2016 smi_1801 eecd2048c284fc706d2335d957b28931 801 Pfam PF03484 tRNA synthetase B5 domain 414 476 4.2E-17 T 26-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 smi_1801 eecd2048c284fc706d2335d957b28931 801 Gene3D G3DSA:3.30.56.20 409 480 4.2E-24 T 26-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 smi_1801 eecd2048c284fc706d2335d957b28931 801 SUPERFAMILY SSF56037 213 399 2.09E-68 T 26-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 smi_1801 eecd2048c284fc706d2335d957b28931 801 Pfam PF01588 Putative tRNA binding domain 45 127 9.4E-20 T 26-04-2016 IPR002547 tRNA-binding domain GO:0000049 Reactome: REACT_71 smi_1801 eecd2048c284fc706d2335d957b28931 801 Gene3D G3DSA:2.40.50.140 41 228 4.5E-50 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold smi_1801 eecd2048c284fc706d2335d957b28931 801 SMART SM00874 408 476 1.2E-24 T 26-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 smi_1801 eecd2048c284fc706d2335d957b28931 801 Gene3D G3DSA:3.30.930.10 493 694 3.0E-63 T 26-04-2016 smi_1801 eecd2048c284fc706d2335d957b28931 801 SUPERFAMILY SSF55681 472 694 2.73E-48 T 26-04-2016 smi_1801 eecd2048c284fc706d2335d957b28931 801 Gene3D G3DSA:3.50.40.10 229 399 8.5E-78 T 26-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 smi_1801 eecd2048c284fc706d2335d957b28931 801 Gene3D G3DSA:3.30.56.10 1 38 1.2E-25 T 26-04-2016 smi_1801 eecd2048c284fc706d2335d957b28931 801 Pfam PF03147 Ferredoxin-fold anticodon binding domain 709 801 2.4E-27 T 26-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 smi_1801 eecd2048c284fc706d2335d957b28931 801 SUPERFAMILY SSF50249 36 197 7.71E-43 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold smi_1801 eecd2048c284fc706d2335d957b28931 801 SUPERFAMILY SSF54991 704 801 8.24E-29 T 26-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 smi_1801 eecd2048c284fc706d2335d957b28931 801 SMART SM00873 218 391 4.0E-89 T 26-04-2016 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 smi_1801 eecd2048c284fc706d2335d957b28931 801 Pfam PF03483 B3/4 domain 219 391 1.1E-67 T 26-04-2016 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 smi_1801 eecd2048c284fc706d2335d957b28931 801 Gene3D G3DSA:3.30.70.380 710 801 3.2E-29 T 26-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 smi_1801 eecd2048c284fc706d2335d957b28931 801 SMART SM00896 708 801 1.8E-39 T 26-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 smi_1801 eecd2048c284fc706d2335d957b28931 801 PANTHER PTHR10947:SF0 2 801 1.4E-302 T 26-04-2016 smi_1801 eecd2048c284fc706d2335d957b28931 801 PANTHER PTHR10947 2 801 1.4E-302 T 26-04-2016 smi_1801 eecd2048c284fc706d2335d957b28931 801 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 801 1.6E-254 T 26-04-2016 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 smi_1801 eecd2048c284fc706d2335d957b28931 801 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 795 45.026 T 26-04-2016 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 smi_1801 eecd2048c284fc706d2335d957b28931 801 SUPERFAMILY SSF46955 411 480 5.95E-18 T 26-04-2016 IPR009061 Putative DNA-binding domain smi_0650 0aa87699f1c58f593b816f1ab99a7f64 324 SMART SM00387 214 320 2.0E-20 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain smi_0650 0aa87699f1c58f593b816f1ab99a7f64 324 SUPERFAMILY SSF55874 161 316 8.51E-27 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain smi_0650 0aa87699f1c58f593b816f1ab99a7f64 324 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 215 316 3.8E-17 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain smi_0650 0aa87699f1c58f593b816f1ab99a7f64 324 Gene3D G3DSA:3.30.565.10 174 316 1.9E-26 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain smi_0650 0aa87699f1c58f593b816f1ab99a7f64 324 PANTHER PTHR24423 91 316 1.9E-114 T 26-04-2016 smi_0650 0aa87699f1c58f593b816f1ab99a7f64 324 PANTHER PTHR24423 8 19 1.9E-114 T 26-04-2016 smi_0650 0aa87699f1c58f593b816f1ab99a7f64 324 PRINTS PR00344 Bacterial sensor protein C-terminal signature 264 274 2.1E-6 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 smi_0650 0aa87699f1c58f593b816f1ab99a7f64 324 PRINTS PR00344 Bacterial sensor protein C-terminal signature 280 298 2.1E-6 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 smi_0650 0aa87699f1c58f593b816f1ab99a7f64 324 PRINTS PR00344 Bacterial sensor protein C-terminal signature 304 317 2.1E-6 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 smi_0650 0aa87699f1c58f593b816f1ab99a7f64 324 PRINTS PR00344 Bacterial sensor protein C-terminal signature 246 260 2.1E-6 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 smi_0650 0aa87699f1c58f593b816f1ab99a7f64 324 PANTHER PTHR24423:SF557 91 316 1.9E-114 T 26-04-2016 smi_0650 0aa87699f1c58f593b816f1ab99a7f64 324 PANTHER PTHR24423:SF557 8 19 1.9E-114 T 26-04-2016 smi_1890 1c2a5c416787512b78f9d52395246533 178 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 154 162 - T 26-04-2016 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_1890 1c2a5c416787512b78f9d52395246533 178 SUPERFAMILY SSF56053 1 82 1.22E-26 T 26-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 smi_1890 1c2a5c416787512b78f9d52395246533 178 PRINTS PR00059 Ribosomal protein L6 signature 141 162 5.6E-31 T 26-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 smi_1890 1c2a5c416787512b78f9d52395246533 178 PRINTS PR00059 Ribosomal protein L6 signature 71 96 5.6E-31 T 26-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 smi_1890 1c2a5c416787512b78f9d52395246533 178 PRINTS PR00059 Ribosomal protein L6 signature 99 115 5.6E-31 T 26-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 smi_1890 1c2a5c416787512b78f9d52395246533 178 SUPERFAMILY SSF56053 83 177 2.49E-35 T 26-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 smi_1890 1c2a5c416787512b78f9d52395246533 178 PANTHER PTHR11655 1 178 6.6E-87 T 26-04-2016 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 smi_1890 1c2a5c416787512b78f9d52395246533 178 Pfam PF00347 Ribosomal protein L6 12 82 4.3E-21 T 26-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 smi_1890 1c2a5c416787512b78f9d52395246533 178 Pfam PF00347 Ribosomal protein L6 91 164 1.9E-19 T 26-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 smi_1890 1c2a5c416787512b78f9d52395246533 178 Gene3D G3DSA:3.90.930.12 2 82 3.5E-31 T 26-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 smi_1890 1c2a5c416787512b78f9d52395246533 178 Gene3D G3DSA:3.90.930.12 83 177 3.4E-37 T 26-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 smi_1890 1c2a5c416787512b78f9d52395246533 178 PIRSF PIRSF002162 1 177 1.6E-46 T 26-04-2016 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 smi_1890 1c2a5c416787512b78f9d52395246533 178 PANTHER PTHR11655:SF14 1 178 6.6E-87 T 26-04-2016 smi_1890 1c2a5c416787512b78f9d52395246533 178 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 176 37.699 T 26-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 smi_1890 1c2a5c416787512b78f9d52395246533 178 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 176 7.9E-74 T 26-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 smi_0662 cd13dd3ec862249479e81e53e63516ff 388 Gene3D G3DSA:3.30.420.10 209 358 9.8E-6 T 26-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 smi_0662 cd13dd3ec862249479e81e53e63516ff 388 Pfam PF13936 Helix-turn-helix domain 4 47 1.4E-16 T 26-04-2016 IPR025246 Transposase IS30-like HTH domain smi_0662 cd13dd3ec862249479e81e53e63516ff 388 SUPERFAMILY SSF53098 207 358 1.97E-9 T 26-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 smi_0662 cd13dd3ec862249479e81e53e63516ff 388 PANTHER PTHR10948 1 372 3.6E-16 T 26-04-2016 smi_0780 cd13dd3ec862249479e81e53e63516ff 388 Gene3D G3DSA:3.30.420.10 209 358 9.8E-6 T 26-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 smi_0780 cd13dd3ec862249479e81e53e63516ff 388 Pfam PF13936 Helix-turn-helix domain 4 47 1.4E-16 T 26-04-2016 IPR025246 Transposase IS30-like HTH domain smi_0780 cd13dd3ec862249479e81e53e63516ff 388 SUPERFAMILY SSF53098 207 358 1.97E-9 T 26-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 smi_0780 cd13dd3ec862249479e81e53e63516ff 388 PANTHER PTHR10948 1 372 3.6E-16 T 26-04-2016 smi_0399 cd13dd3ec862249479e81e53e63516ff 388 Gene3D G3DSA:3.30.420.10 209 358 9.8E-6 T 26-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 smi_0399 cd13dd3ec862249479e81e53e63516ff 388 Pfam PF13936 Helix-turn-helix domain 4 47 1.4E-16 T 26-04-2016 IPR025246 Transposase IS30-like HTH domain smi_0399 cd13dd3ec862249479e81e53e63516ff 388 SUPERFAMILY SSF53098 207 358 1.97E-9 T 26-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 smi_0399 cd13dd3ec862249479e81e53e63516ff 388 PANTHER PTHR10948 1 372 3.6E-16 T 26-04-2016 smi_0782 cd13dd3ec862249479e81e53e63516ff 388 Gene3D G3DSA:3.30.420.10 209 358 9.8E-6 T 26-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 smi_0782 cd13dd3ec862249479e81e53e63516ff 388 Pfam PF13936 Helix-turn-helix domain 4 47 1.4E-16 T 26-04-2016 IPR025246 Transposase IS30-like HTH domain smi_0782 cd13dd3ec862249479e81e53e63516ff 388 SUPERFAMILY SSF53098 207 358 1.97E-9 T 26-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 smi_0782 cd13dd3ec862249479e81e53e63516ff 388 PANTHER PTHR10948 1 372 3.6E-16 T 26-04-2016 smi_0140 cd13dd3ec862249479e81e53e63516ff 388 Gene3D G3DSA:3.30.420.10 209 358 9.8E-6 T 26-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 smi_0140 cd13dd3ec862249479e81e53e63516ff 388 Pfam PF13936 Helix-turn-helix domain 4 47 1.4E-16 T 26-04-2016 IPR025246 Transposase IS30-like HTH domain smi_0140 cd13dd3ec862249479e81e53e63516ff 388 SUPERFAMILY SSF53098 207 358 1.97E-9 T 26-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 smi_0140 cd13dd3ec862249479e81e53e63516ff 388 PANTHER PTHR10948 1 372 3.6E-16 T 26-04-2016 smi_1829 cd13dd3ec862249479e81e53e63516ff 388 Gene3D G3DSA:3.30.420.10 209 358 9.8E-6 T 26-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 smi_1829 cd13dd3ec862249479e81e53e63516ff 388 Pfam PF13936 Helix-turn-helix domain 4 47 1.4E-16 T 26-04-2016 IPR025246 Transposase IS30-like HTH domain smi_1829 cd13dd3ec862249479e81e53e63516ff 388 SUPERFAMILY SSF53098 207 358 1.97E-9 T 26-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 smi_1829 cd13dd3ec862249479e81e53e63516ff 388 PANTHER PTHR10948 1 372 3.6E-16 T 26-04-2016 smi_0781 cd13dd3ec862249479e81e53e63516ff 388 Gene3D G3DSA:3.30.420.10 209 358 9.8E-6 T 26-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 smi_0781 cd13dd3ec862249479e81e53e63516ff 388 Pfam PF13936 Helix-turn-helix domain 4 47 1.4E-16 T 26-04-2016 IPR025246 Transposase IS30-like HTH domain smi_0781 cd13dd3ec862249479e81e53e63516ff 388 SUPERFAMILY SSF53098 207 358 1.97E-9 T 26-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 smi_0781 cd13dd3ec862249479e81e53e63516ff 388 PANTHER PTHR10948 1 372 3.6E-16 T 26-04-2016 smi_1798 cd13dd3ec862249479e81e53e63516ff 388 Gene3D G3DSA:3.30.420.10 209 358 9.8E-6 T 26-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 smi_1798 cd13dd3ec862249479e81e53e63516ff 388 Pfam PF13936 Helix-turn-helix domain 4 47 1.4E-16 T 26-04-2016 IPR025246 Transposase IS30-like HTH domain smi_1798 cd13dd3ec862249479e81e53e63516ff 388 SUPERFAMILY SSF53098 207 358 1.97E-9 T 26-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 smi_1798 cd13dd3ec862249479e81e53e63516ff 388 PANTHER PTHR10948 1 372 3.6E-16 T 26-04-2016 smi_0779 cd13dd3ec862249479e81e53e63516ff 388 Gene3D G3DSA:3.30.420.10 209 358 9.8E-6 T 26-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 smi_0779 cd13dd3ec862249479e81e53e63516ff 388 Pfam PF13936 Helix-turn-helix domain 4 47 1.4E-16 T 26-04-2016 IPR025246 Transposase IS30-like HTH domain smi_0779 cd13dd3ec862249479e81e53e63516ff 388 SUPERFAMILY SSF53098 207 358 1.97E-9 T 26-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 smi_0779 cd13dd3ec862249479e81e53e63516ff 388 PANTHER PTHR10948 1 372 3.6E-16 T 26-04-2016 smi_0530 abb46b34952d1f64e4468dcf85ebdc39 275 SUPERFAMILY SSF56219 1 274 1.24E-57 T 26-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase smi_0530 abb46b34952d1f64e4468dcf85ebdc39 275 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 37 46 - T 26-04-2016 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 smi_0530 abb46b34952d1f64e4468dcf85ebdc39 275 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 5 252 1.7E-22 T 26-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase smi_0530 abb46b34952d1f64e4468dcf85ebdc39 275 ProSitePatterns PS00727 AP endonucleases family 1 signature 2. 207 223 - T 26-04-2016 IPR020848 AP endonuclease 1, conserved site GO:0003677|GO:0004519|GO:0005622|GO:0006281 smi_0530 abb46b34952d1f64e4468dcf85ebdc39 275 ProSitePatterns PS00728 AP endonucleases family 1 signature 3. 234 245 - T 26-04-2016 IPR020848 AP endonuclease 1, conserved site GO:0003677|GO:0004519|GO:0005622|GO:0006281 smi_0530 abb46b34952d1f64e4468dcf85ebdc39 275 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 273 1.0E-55 T 26-04-2016 smi_0530 abb46b34952d1f64e4468dcf85ebdc39 275 Gene3D G3DSA:3.60.10.10 1 274 3.9E-76 T 26-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase smi_0530 abb46b34952d1f64e4468dcf85ebdc39 275 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 273 2.4E-86 T 26-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 smi_0530 abb46b34952d1f64e4468dcf85ebdc39 275 PANTHER PTHR22748 1 275 1.5E-88 T 26-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 smi_0333 9d66a6eeb446fa8afb79e965a9002a6f 323 PANTHER PTHR11067:SF9 117 322 2.0E-73 T 26-04-2016 smi_0333 9d66a6eeb446fa8afb79e965a9002a6f 323 PANTHER PTHR11067 117 322 2.0E-73 T 26-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 smi_0333 9d66a6eeb446fa8afb79e965a9002a6f 323 Pfam PF01725 Ham1 family 124 312 4.6E-48 T 26-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 smi_0333 9d66a6eeb446fa8afb79e965a9002a6f 323 Hamap MF_01405 dITP/XTP pyrophosphatase [rdgB]. 122 316 48.272 T 26-04-2016 IPR020922 Non-canonical purine NTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 smi_0333 9d66a6eeb446fa8afb79e965a9002a6f 323 SUPERFAMILY SSF52972 122 315 4.97E-63 T 26-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like smi_0333 9d66a6eeb446fa8afb79e965a9002a6f 323 Gene3D G3DSA:3.90.950.10 118 317 1.3E-72 T 26-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like smi_0333 9d66a6eeb446fa8afb79e965a9002a6f 323 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 124 314 1.3E-53 T 26-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 smi_1741 51099f14951b390c2614765e4dc57c3b 210 SUPERFAMILY SSF52172 1 128 3.7E-33 T 26-04-2016 IPR011006 CheY-like superfamily smi_1741 51099f14951b390c2614765e4dc57c3b 210 SUPERFAMILY SSF46894 132 206 3.4E-24 T 26-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 smi_1741 51099f14951b390c2614765e4dc57c3b 210 Pfam PF00072 Response regulator receiver domain 3 115 8.3E-26 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 smi_1741 51099f14951b390c2614765e4dc57c3b 210 Gene3D G3DSA:3.40.50.2300 1 123 2.5E-34 T 26-04-2016 smi_1741 51099f14951b390c2614765e4dc57c3b 210 PANTHER PTHR26402:SF151 1 201 1.8E-85 T 26-04-2016 smi_1741 51099f14951b390c2614765e4dc57c3b 210 SMART SM00421 142 199 9.0E-27 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 smi_1741 51099f14951b390c2614765e4dc57c3b 210 Gene3D G3DSA:1.10.10.10 124 206 4.3E-33 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain smi_1741 51099f14951b390c2614765e4dc57c3b 210 Pfam PF00196 Bacterial regulatory proteins, luxR family 145 199 3.3E-22 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 smi_1741 51099f14951b390c2614765e4dc57c3b 210 SMART SM00448 1 114 3.7E-29 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 smi_1741 51099f14951b390c2614765e4dc57c3b 210 PANTHER PTHR26402 1 201 1.8E-85 T 26-04-2016 smi_1741 51099f14951b390c2614765e4dc57c3b 210 ProSitePatterns PS00622 LuxR-type HTH domain signature. 159 186 - T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 smi_1741 51099f14951b390c2614765e4dc57c3b 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 159 175 7.4E-15 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 smi_1741 51099f14951b390c2614765e4dc57c3b 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 175 187 7.4E-15 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 smi_1741 51099f14951b390c2614765e4dc57c3b 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 145 159 7.4E-15 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 smi_0897 9e0a8576c5b1b1bb639fa326d4730bd3 649 Pfam PF01751 Toprim domain 428 538 1.0E-17 T 26-04-2016 IPR006171 Toprim domain smi_0897 9e0a8576c5b1b1bb639fa326d4730bd3 649 PRINTS PR00418 DNA topoisomerase II family signature 75 88 1.8E-70 T 26-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 smi_0897 9e0a8576c5b1b1bb639fa326d4730bd3 649 PRINTS PR00418 DNA topoisomerase II family signature 40 55 1.8E-70 T 26-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 smi_0897 9e0a8576c5b1b1bb639fa326d4730bd3 649 PRINTS PR00418 DNA topoisomerase II family signature 495 511 1.8E-70 T 26-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 smi_0897 9e0a8576c5b1b1bb639fa326d4730bd3 649 PRINTS PR00418 DNA topoisomerase II family signature 513 530 1.8E-70 T 26-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 smi_0897 9e0a8576c5b1b1bb639fa326d4730bd3 649 PRINTS PR00418 DNA topoisomerase II family signature 577 593 1.8E-70 T 26-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 smi_0897 9e0a8576c5b1b1bb639fa326d4730bd3 649 PRINTS PR00418 DNA topoisomerase II family signature 117 131 1.8E-70 T 26-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 smi_0897 9e0a8576c5b1b1bb639fa326d4730bd3 649 PRINTS PR00418 DNA topoisomerase II family signature 533 545 1.8E-70 T 26-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 smi_0897 9e0a8576c5b1b1bb639fa326d4730bd3 649 PRINTS PR00418 DNA topoisomerase II family signature 273 286 1.8E-70 T 26-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 smi_0897 9e0a8576c5b1b1bb639fa326d4730bd3 649 PRINTS PR00418 DNA topoisomerase II family signature 429 443 1.8E-70 T 26-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 smi_0897 9e0a8576c5b1b1bb639fa326d4730bd3 649 PANTHER PTHR10169:SF44 9 637 0.0 T 26-04-2016 smi_0897 9e0a8576c5b1b1bb639fa326d4730bd3 649 SUPERFAMILY SSF55874 10 224 1.13E-69 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain smi_0897 9e0a8576c5b1b1bb639fa326d4730bd3 649 Hamap MF_00939 DNA topoisomerase 4 subunit B [parE]. 9 643 51.305 T 26-04-2016 IPR005740 DNA topoisomerase 4 subunit B, Firmicutes/Mollicutes GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 smi_0897 9e0a8576c5b1b1bb639fa326d4730bd3 649 PRINTS PR01159 DNA gyrase subunit B signature 381 401 4.9E-54 T 26-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 smi_0897 9e0a8576c5b1b1bb639fa326d4730bd3 649 PRINTS PR01159 DNA gyrase subunit B signature 598 610 4.9E-54 T 26-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 smi_0897 9e0a8576c5b1b1bb639fa326d4730bd3 649 PRINTS PR01159 DNA gyrase subunit B signature 614 630 4.9E-54 T 26-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 smi_0897 9e0a8576c5b1b1bb639fa326d4730bd3 649 PRINTS PR01159 DNA gyrase subunit B signature 11 21 4.9E-54 T 26-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 smi_0897 9e0a8576c5b1b1bb639fa326d4730bd3 649 PRINTS PR01159 DNA gyrase subunit B signature 367 381 4.9E-54 T 26-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 smi_0897 9e0a8576c5b1b1bb639fa326d4730bd3 649 PRINTS PR01159 DNA gyrase subunit B signature 202 215 4.9E-54 T 26-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 smi_0897 9e0a8576c5b1b1bb639fa326d4730bd3 649 PRINTS PR01159 DNA gyrase subunit B signature 479 488 4.9E-54 T 26-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 smi_0897 9e0a8576c5b1b1bb639fa326d4730bd3 649 PRINTS PR01159 DNA gyrase subunit B signature 317 333 4.9E-54 T 26-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 smi_0897 9e0a8576c5b1b1bb639fa326d4730bd3 649 PRINTS PR01159 DNA gyrase subunit B signature 187 202 4.9E-54 T 26-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 smi_0897 9e0a8576c5b1b1bb639fa326d4730bd3 649 PRINTS PR01159 DNA gyrase subunit B signature 247 265 4.9E-54 T 26-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 smi_0897 9e0a8576c5b1b1bb639fa326d4730bd3 649 ProSitePatterns PS00177 DNA topoisomerase II signature. 431 439 - T 26-04-2016 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 smi_0897 9e0a8576c5b1b1bb639fa326d4730bd3 649 SMART SM00433 40 638 0.0 T 26-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 smi_0897 9e0a8576c5b1b1bb639fa326d4730bd3 649 Gene3D G3DSA:3.30.230.10 226 397 4.6E-63 T 26-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup smi_0897 9e0a8576c5b1b1bb639fa326d4730bd3 649 Gene3D G3DSA:3.40.50.670 414 627 3.5E-87 T 26-04-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 smi_0897 9e0a8576c5b1b1bb639fa326d4730bd3 649 Gene3D G3DSA:3.30.565.10 11 224 1.4E-87 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain smi_0897 9e0a8576c5b1b1bb639fa326d4730bd3 649 SUPERFAMILY SSF56719 403 641 8.63E-88 T 26-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 smi_0897 9e0a8576c5b1b1bb639fa326d4730bd3 649 TIGRFAM TIGR01058 parE_Gpos: DNA topoisomerase IV, B subunit 9 644 0.0 T 26-04-2016 IPR005740 DNA topoisomerase 4 subunit B, Firmicutes/Mollicutes GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 smi_0897 9e0a8576c5b1b1bb639fa326d4730bd3 649 SUPERFAMILY SSF54211 227 397 9.86E-53 T 26-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold smi_0897 9e0a8576c5b1b1bb639fa326d4730bd3 649 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 573 634 2.5E-29 T 26-04-2016 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 smi_0897 9e0a8576c5b1b1bb639fa326d4730bd3 649 Pfam PF00204 DNA gyrase B 227 397 4.7E-56 T 26-04-2016 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 smi_0897 9e0a8576c5b1b1bb639fa326d4730bd3 649 SMART SM00387 36 182 8.0E-27 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain smi_0897 9e0a8576c5b1b1bb639fa326d4730bd3 649 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 37 181 8.8E-23 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain smi_0897 9e0a8576c5b1b1bb639fa326d4730bd3 649 PANTHER PTHR10169 9 637 0.0 T 26-04-2016 smi_1142 9c4b863e569377e321acca2568f568bc 1030 TIGRFAM TIGR01363 strep_his_triad: streptococcal histidine triad protein 385 546 6.1E-73 T 26-04-2016 IPR023832 Histidine triad protein smi_1142 9c4b863e569377e321acca2568f568bc 1030 TIGRFAM TIGR01363 strep_his_triad: streptococcal histidine triad protein 1 337 5.8E-177 T 26-04-2016 IPR023832 Histidine triad protein smi_1142 9c4b863e569377e321acca2568f568bc 1030 SUPERFAMILY SSF142887 591 642 2.09E-13 T 26-04-2016 smi_1142 9c4b863e569377e321acca2568f568bc 1030 SUPERFAMILY SSF142887 743 782 4.32E-5 T 26-04-2016 smi_1142 9c4b863e569377e321acca2568f568bc 1030 SUPERFAMILY SSF142887 387 439 6.15E-19 T 26-04-2016 smi_1142 9c4b863e569377e321acca2568f568bc 1030 SUPERFAMILY SSF142887 290 339 1.7E-16 T 26-04-2016 smi_1142 9c4b863e569377e321acca2568f568bc 1030 SUPERFAMILY SSF142887 180 231 3.92E-19 T 26-04-2016 smi_1142 9c4b863e569377e321acca2568f568bc 1030 SUPERFAMILY SSF142887 500 548 6.67E-17 T 26-04-2016 smi_1142 9c4b863e569377e321acca2568f568bc 1030 Pfam PF04270 Streptococcal histidine triad protein 390 439 6.7E-27 T 26-04-2016 IPR006270 Streptococcal histidine triad repeat smi_1142 9c4b863e569377e321acca2568f568bc 1030 Pfam PF04270 Streptococcal histidine triad protein 504 546 1.6E-15 T 26-04-2016 IPR006270 Streptococcal histidine triad repeat smi_1142 9c4b863e569377e321acca2568f568bc 1030 Pfam PF04270 Streptococcal histidine triad protein 295 339 1.1E-15 T 26-04-2016 IPR006270 Streptococcal histidine triad repeat smi_1142 9c4b863e569377e321acca2568f568bc 1030 Pfam PF04270 Streptococcal histidine triad protein 595 642 7.0E-13 T 26-04-2016 IPR006270 Streptococcal histidine triad repeat smi_1142 9c4b863e569377e321acca2568f568bc 1030 Pfam PF04270 Streptococcal histidine triad protein 71 89 0.0014 T 26-04-2016 IPR006270 Streptococcal histidine triad repeat smi_1142 9c4b863e569377e321acca2568f568bc 1030 Pfam PF04270 Streptococcal histidine triad protein 838 894 1.6E-13 T 26-04-2016 IPR006270 Streptococcal histidine triad repeat smi_1142 9c4b863e569377e321acca2568f568bc 1030 Pfam PF04270 Streptococcal histidine triad protein 183 232 4.8E-26 T 26-04-2016 IPR006270 Streptococcal histidine triad repeat smi_1142 9c4b863e569377e321acca2568f568bc 1030 Pfam PF04270 Streptococcal histidine triad protein 747 777 1.2E-4 T 26-04-2016 IPR006270 Streptococcal histidine triad repeat smi_1142 9c4b863e569377e321acca2568f568bc 1030 Pfam PF16645 Unstructured region on Pneumococcal histidine triad protein 450 500 4.3E-11 T 26-04-2016 smi_0937 781ab697a5b118228693867b35a58b7b 265 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 3 263 5.7E-91 T 26-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 smi_0937 781ab697a5b118228693867b35a58b7b 265 PIRSF PIRSF000193 1 265 1.7E-81 T 26-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 smi_0937 781ab697a5b118228693867b35a58b7b 265 Gene3D G3DSA:1.10.3730.10 159 263 2.4E-43 T 26-04-2016 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 smi_0937 781ab697a5b118228693867b35a58b7b 265 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 219 241 - T 26-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 smi_0937 781ab697a5b118228693867b35a58b7b 265 PANTHER PTHR11645 1 265 3.7E-107 T 26-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 smi_0937 781ab697a5b118228693867b35a58b7b 265 PANTHER PTHR11645:SF0 1 265 3.7E-107 T 26-04-2016 smi_0937 781ab697a5b118228693867b35a58b7b 265 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 159 263 5.9E-40 T 26-04-2016 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 smi_0937 781ab697a5b118228693867b35a58b7b 265 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 1 263 26.527 T 26-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 smi_0937 781ab697a5b118228693867b35a58b7b 265 SUPERFAMILY SSF51735 1 156 4.18E-34 T 26-04-2016 IPR016040 NAD(P)-binding domain smi_0937 781ab697a5b118228693867b35a58b7b 265 SUPERFAMILY SSF48179 159 265 1.34E-37 T 26-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 smi_0937 781ab697a5b118228693867b35a58b7b 265 Gene3D G3DSA:3.40.50.720 1 156 1.0E-39 T 26-04-2016 IPR016040 NAD(P)-binding domain smi_0937 781ab697a5b118228693867b35a58b7b 265 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 2 96 1.1E-16 T 26-04-2016 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal smi_0642 78b97d5a539af0397e5aa9205dda252c 740 Gene3D G3DSA:3.30.70.260 662 736 1.1E-11 T 26-04-2016 smi_0642 78b97d5a539af0397e5aa9205dda252c 740 Pfam PF13328 HD domain 31 180 1.6E-47 T 26-04-2016 IPR003607 HD/PDEase domain smi_0642 78b97d5a539af0397e5aa9205dda252c 740 SUPERFAMILY SSF81301 197 370 7.36E-61 T 26-04-2016 smi_0642 78b97d5a539af0397e5aa9205dda252c 740 Pfam PF04607 Region found in RelA / SpoT proteins 240 348 6.2E-36 T 26-04-2016 IPR007685 RelA/SpoT GO:0015969 smi_0642 78b97d5a539af0397e5aa9205dda252c 740 Pfam PF13291 ACT domain 659 737 5.7E-20 T 26-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 smi_0642 78b97d5a539af0397e5aa9205dda252c 740 Gene3D G3DSA:3.10.20.30 393 454 9.3E-25 T 26-04-2016 IPR012675 Beta-grasp domain smi_0642 78b97d5a539af0397e5aa9205dda252c 740 PANTHER PTHR21262 10 740 0.0 T 26-04-2016 smi_0642 78b97d5a539af0397e5aa9205dda252c 740 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 31 737 7.1E-238 T 26-04-2016 IPR004811 RelA/SpoT family GO:0015969 smi_0642 78b97d5a539af0397e5aa9205dda252c 740 SUPERFAMILY SSF81271 381 454 6.32E-19 T 26-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 smi_0642 78b97d5a539af0397e5aa9205dda252c 740 SUPERFAMILY SSF109604 10 196 7.85E-74 T 26-04-2016 smi_0642 78b97d5a539af0397e5aa9205dda252c 740 SMART SM00471 46 158 3.3E-9 T 26-04-2016 IPR003607 HD/PDEase domain smi_0642 78b97d5a539af0397e5aa9205dda252c 740 Pfam PF02824 TGS domain 394 453 5.2E-21 T 26-04-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 smi_0642 78b97d5a539af0397e5aa9205dda252c 740 Gene3D G3DSA:3.30.460.10 198 329 1.3E-47 T 26-04-2016 smi_0642 78b97d5a539af0397e5aa9205dda252c 740 SMART SM00954 240 349 3.0E-61 T 26-04-2016 IPR007685 RelA/SpoT GO:0015969 smi_0642 78b97d5a539af0397e5aa9205dda252c 740 SUPERFAMILY SSF55021 662 737 1.03E-8 T 26-04-2016 smi_0642 78b97d5a539af0397e5aa9205dda252c 740 PANTHER PTHR21262:SF0 10 740 0.0 T 26-04-2016 smi_1663 167b051810c80fe1c1fa095eff82500a 514 PRINTS PR00315 GTP-binding elongation factor signature 82 92 4.9E-11 T 26-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 smi_1663 167b051810c80fe1c1fa095eff82500a 514 PRINTS PR00315 GTP-binding elongation factor signature 98 109 4.9E-11 T 26-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 smi_1663 167b051810c80fe1c1fa095eff82500a 514 PRINTS PR00315 GTP-binding elongation factor signature 134 143 4.9E-11 T 26-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 smi_1663 167b051810c80fe1c1fa095eff82500a 514 PRINTS PR00315 GTP-binding elongation factor signature 62 70 4.9E-11 T 26-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 smi_1663 167b051810c80fe1c1fa095eff82500a 514 PRINTS PR00315 GTP-binding elongation factor signature 12 25 4.9E-11 T 26-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 smi_1663 167b051810c80fe1c1fa095eff82500a 514 PANTHER PTHR23115 1 181 3.3E-231 T 26-04-2016 smi_1663 167b051810c80fe1c1fa095eff82500a 514 PANTHER PTHR23115 239 456 3.3E-231 T 26-04-2016 smi_1663 167b051810c80fe1c1fa095eff82500a 514 Pfam PF16658 Class II release factor RF3, C-terminal domain 377 501 3.8E-43 T 26-04-2016 IPR032090 Peptide chain release factor 3, C-terminal smi_1663 167b051810c80fe1c1fa095eff82500a 514 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 12 155 5.3E-21 T 26-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 smi_1663 167b051810c80fe1c1fa095eff82500a 514 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 55 70 - T 26-04-2016 IPR031157 Tr-type G domain, conserved site smi_1663 167b051810c80fe1c1fa095eff82500a 514 SUPERFAMILY SSF50447 249 379 2.59E-28 T 26-04-2016 IPR009000 Translation protein, beta-barrel domain smi_1663 167b051810c80fe1c1fa095eff82500a 514 Gene3D G3DSA:3.40.50.300 4 270 4.9E-69 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1663 167b051810c80fe1c1fa095eff82500a 514 SUPERFAMILY SSF52540 6 265 3.14E-85 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1663 167b051810c80fe1c1fa095eff82500a 514 Gene3D G3DSA:2.40.30.10 281 383 3.1E-25 T 26-04-2016 smi_1663 167b051810c80fe1c1fa095eff82500a 514 Pfam PF00009 Elongation factor Tu GTP binding domain 9 265 1.1E-50 T 26-04-2016 smi_1663 167b051810c80fe1c1fa095eff82500a 514 SUPERFAMILY SSF54980 383 455 5.04E-16 T 26-04-2016 IPR009022 Elongation factor G, III-V domain smi_1663 167b051810c80fe1c1fa095eff82500a 514 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 1 514 49.651 T 26-04-2016 IPR004548 Peptide chain release factor 3 GO:0005525|GO:0005737|GO:0006415|GO:0016149 smi_1663 167b051810c80fe1c1fa095eff82500a 514 PANTHER PTHR23115:SF69 1 181 3.3E-231 T 26-04-2016 smi_1663 167b051810c80fe1c1fa095eff82500a 514 PANTHER PTHR23115:SF69 239 456 3.3E-231 T 26-04-2016 smi_1663 167b051810c80fe1c1fa095eff82500a 514 Pfam PF03144 Elongation factor Tu domain 2 303 369 5.1E-12 T 26-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 smi_1663 167b051810c80fe1c1fa095eff82500a 514 PRINTS PR01037 Tetracycline resistance protein TetO/TetQ/TetM family signature 120 143 7.6E-9 T 26-04-2016 smi_1663 167b051810c80fe1c1fa095eff82500a 514 PRINTS PR01037 Tetracycline resistance protein TetO/TetQ/TetM family signature 239 261 7.6E-9 T 26-04-2016 smi_1663 167b051810c80fe1c1fa095eff82500a 514 TIGRFAM TIGR00503 prfC: peptide chain release factor 3 4 511 6.5E-198 T 26-04-2016 IPR004548 Peptide chain release factor 3 GO:0005525|GO:0005737|GO:0006415|GO:0016149 smi_1663 167b051810c80fe1c1fa095eff82500a 514 Gene3D G3DSA:3.30.70.870 384 454 3.7E-14 T 26-04-2016 smi_0560 b780808bf8f475cbf6e68c09976ed0b5 423 Gene3D G3DSA:1.10.8.60 141 205 2.0E-10 T 26-04-2016 smi_0560 b780808bf8f475cbf6e68c09976ed0b5 423 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 42 144 2.3E-14 T 26-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 smi_0560 b780808bf8f475cbf6e68c09976ed0b5 423 PANTHER PTHR13779:SF7 5 422 1.5E-154 T 26-04-2016 smi_0560 b780808bf8f475cbf6e68c09976ed0b5 423 SUPERFAMILY SSF52540 4 225 3.27E-44 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0560 b780808bf8f475cbf6e68c09976ed0b5 423 Gene3D G3DSA:3.40.50.300 6 140 6.8E-28 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0560 b780808bf8f475cbf6e68c09976ed0b5 423 Gene3D G3DSA:1.20.272.10 233 330 1.4E-39 T 26-04-2016 smi_0560 b780808bf8f475cbf6e68c09976ed0b5 423 Pfam PF12002 MgsA AAA+ ATPase C terminal 252 417 3.3E-61 T 26-04-2016 IPR021886 MgsA AAA+ ATPase C-terminal smi_0560 b780808bf8f475cbf6e68c09976ed0b5 423 PANTHER PTHR13779 5 422 1.5E-154 T 26-04-2016 smi_0560 b780808bf8f475cbf6e68c09976ed0b5 423 Gene3D G3DSA:1.10.3710.10 331 422 3.6E-26 T 26-04-2016 smi_0560 b780808bf8f475cbf6e68c09976ed0b5 423 Pfam PF16193 AAA C-terminal domain 173 251 2.6E-22 T 26-04-2016 IPR032423 AAA ATPase, C-terminal domain smi_0560 b780808bf8f475cbf6e68c09976ed0b5 423 SMART SM00382 38 150 7.0E-11 T 26-04-2016 IPR003593 AAA+ ATPase domain smi_0560 b780808bf8f475cbf6e68c09976ed0b5 423 SUPERFAMILY SSF48019 237 420 2.27E-67 T 26-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 smi_0616 9e0090591a94440b96230e847abd07de 457 SUPERFAMILY SSF63418 4 96 2.75E-20 T 26-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 smi_0616 9e0090591a94440b96230e847abd07de 457 Gene3D G3DSA:3.40.1390.10 1 79 3.8E-20 T 26-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 smi_0616 9e0090591a94440b96230e847abd07de 457 PANTHER PTHR23135 14 454 1.3E-145 T 26-04-2016 smi_0616 9e0090591a94440b96230e847abd07de 457 SUPERFAMILY SSF53623 101 302 8.77E-44 T 26-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 smi_0616 9e0090591a94440b96230e847abd07de 457 Pfam PF02875 Mur ligase family, glutamate ligase domain 307 389 1.2E-9 T 26-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 smi_0616 9e0090591a94440b96230e847abd07de 457 Gene3D G3DSA:3.40.1190.10 82 302 2.5E-55 T 26-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 smi_0616 9e0090591a94440b96230e847abd07de 457 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 31 452 1.9E-107 T 26-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 smi_0616 9e0090591a94440b96230e847abd07de 457 PANTHER PTHR23135:SF3 14 454 1.3E-145 T 26-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 smi_0616 9e0090591a94440b96230e847abd07de 457 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 3 453 31.268 T 26-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 smi_0616 9e0090591a94440b96230e847abd07de 457 SUPERFAMILY SSF53244 306 452 7.55E-31 T 26-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 smi_0616 9e0090591a94440b96230e847abd07de 457 Pfam PF08245 Mur ligase middle domain 105 284 3.0E-39 T 26-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 smi_0616 9e0090591a94440b96230e847abd07de 457 Pfam PF01225 Mur ligase family, catalytic domain 31 91 5.3E-5 T 26-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 smi_0616 9e0090591a94440b96230e847abd07de 457 Gene3D G3DSA:3.90.190.20 305 454 4.3E-36 T 26-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 smi_0528 12c13c231343a856b8b50c0660090ab6 193 SUPERFAMILY SSF53271 1 188 3.69E-48 T 26-04-2016 IPR029057 Phosphoribosyltransferase-like smi_0528 12c13c231343a856b8b50c0660090ab6 193 TIGRFAM TIGR01744 XPRTase: xanthine phosphoribosyltransferase 1 188 2.4E-80 T 26-04-2016 IPR010079 Xanthine phosphoribosyltransferase GO:0016763|GO:0043101|GO:0046110 KEGG: 00230+2.4.2.22|UniPathway: UPA00602 smi_0528 12c13c231343a856b8b50c0660090ab6 193 PANTHER PTHR11776:SF1 1 188 1.2E-83 T 26-04-2016 smi_0528 12c13c231343a856b8b50c0660090ab6 193 Pfam PF00156 Phosphoribosyl transferase domain 35 154 5.5E-8 T 26-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 smi_0528 12c13c231343a856b8b50c0660090ab6 193 PANTHER PTHR11776 1 188 1.2E-83 T 26-04-2016 smi_0528 12c13c231343a856b8b50c0660090ab6 193 Hamap MF_01184 Xanthine phosphoribosyltransferase [xpt]. 1 189 41.596 T 26-04-2016 IPR010079 Xanthine phosphoribosyltransferase GO:0016763|GO:0043101|GO:0046110 KEGG: 00230+2.4.2.22|UniPathway: UPA00602 smi_0528 12c13c231343a856b8b50c0660090ab6 193 Gene3D G3DSA:3.40.50.2020 1 190 3.6E-67 T 26-04-2016 IPR029057 Phosphoribosyltransferase-like smi_1884 91b8111984f4440321368932ab337ff7 212 Hamap MF_00235 Adenylate kinase [adk]. 1 209 48.37 T 26-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 smi_1884 91b8111984f4440321368932ab337ff7 212 PRINTS PR00094 Adenylate kinase signature 32 46 2.2E-30 T 26-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 smi_1884 91b8111984f4440321368932ab337ff7 212 PRINTS PR00094 Adenylate kinase signature 156 171 2.2E-30 T 26-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 smi_1884 91b8111984f4440321368932ab337ff7 212 PRINTS PR00094 Adenylate kinase signature 173 187 2.2E-30 T 26-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 smi_1884 91b8111984f4440321368932ab337ff7 212 PRINTS PR00094 Adenylate kinase signature 82 98 2.2E-30 T 26-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 smi_1884 91b8111984f4440321368932ab337ff7 212 PRINTS PR00094 Adenylate kinase signature 4 17 2.2E-30 T 26-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 smi_1884 91b8111984f4440321368932ab337ff7 212 Gene3D G3DSA:3.40.50.300 1 208 1.5E-67 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1884 91b8111984f4440321368932ab337ff7 212 Pfam PF00406 Adenylate kinase 5 186 2.5E-55 T 26-04-2016 smi_1884 91b8111984f4440321368932ab337ff7 212 TIGRFAM TIGR01351 adk: adenylate kinase 2 208 4.6E-72 T 26-04-2016 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 smi_1884 91b8111984f4440321368932ab337ff7 212 SUPERFAMILY SSF52540 1 209 1.68E-37 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1884 91b8111984f4440321368932ab337ff7 212 ProSitePatterns PS00113 Adenylate kinase signature. 82 93 - T 26-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 smi_1884 91b8111984f4440321368932ab337ff7 212 PANTHER PTHR23359 1 211 6.5E-86 T 26-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 smi_1973 e3eb36283ee0fbce5633052f088eb29d 215 SMART SM00382 28 208 1.3E-10 T 26-04-2016 IPR003593 AAA+ ATPase domain smi_1973 e3eb36283ee0fbce5633052f088eb29d 215 SUPERFAMILY SSF52540 4 213 9.52E-52 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1973 e3eb36283ee0fbce5633052f088eb29d 215 PANTHER PTHR24220:SF507 5 214 3.8E-70 T 26-04-2016 smi_1973 e3eb36283ee0fbce5633052f088eb29d 215 PANTHER PTHR24220 5 214 3.8E-70 T 26-04-2016 smi_1973 e3eb36283ee0fbce5633052f088eb29d 215 ProSitePatterns PS00211 ABC transporters family signature. 131 145 - T 26-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 smi_1973 e3eb36283ee0fbce5633052f088eb29d 215 Pfam PF00005 ABC transporter 20 159 4.2E-29 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 smi_1973 e3eb36283ee0fbce5633052f088eb29d 215 Gene3D G3DSA:3.40.50.300 3 212 9.9E-55 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1021 136c0f4a5d4cffa48e56a826bf98ce12 607 Pfam PF03144 Elongation factor Tu domain 2 214 284 3.7E-8 T 26-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 smi_1021 136c0f4a5d4cffa48e56a826bf98ce12 607 Hamap MF_00071 Elongation factor 4 [lepA]. 1 607 308.674 T 26-04-2016 IPR006297 Elongation factor 4 GO:0005525 smi_1021 136c0f4a5d4cffa48e56a826bf98ce12 607 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 12 183 9.0E-20 T 26-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 smi_1021 136c0f4a5d4cffa48e56a826bf98ce12 607 SUPERFAMILY SSF50447 175 297 2.91E-30 T 26-04-2016 IPR009000 Translation protein, beta-barrel domain smi_1021 136c0f4a5d4cffa48e56a826bf98ce12 607 PRINTS PR00315 GTP-binding elongation factor signature 99 110 5.1E-14 T 26-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 smi_1021 136c0f4a5d4cffa48e56a826bf98ce12 607 PRINTS PR00315 GTP-binding elongation factor signature 83 93 5.1E-14 T 26-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 smi_1021 136c0f4a5d4cffa48e56a826bf98ce12 607 PRINTS PR00315 GTP-binding elongation factor signature 58 66 5.1E-14 T 26-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 smi_1021 136c0f4a5d4cffa48e56a826bf98ce12 607 PRINTS PR00315 GTP-binding elongation factor signature 135 144 5.1E-14 T 26-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 smi_1021 136c0f4a5d4cffa48e56a826bf98ce12 607 PRINTS PR00315 GTP-binding elongation factor signature 15 28 5.1E-14 T 26-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 smi_1021 136c0f4a5d4cffa48e56a826bf98ce12 607 SUPERFAMILY SSF54980 408 503 3.98E-27 T 26-04-2016 IPR009022 Elongation factor G, III-V domain smi_1021 136c0f4a5d4cffa48e56a826bf98ce12 607 Gene3D G3DSA:3.30.70.870 301 378 9.2E-28 T 26-04-2016 smi_1021 136c0f4a5d4cffa48e56a826bf98ce12 607 Pfam PF00009 Elongation factor Tu GTP binding domain 12 190 1.8E-52 T 26-04-2016 smi_1021 136c0f4a5d4cffa48e56a826bf98ce12 607 Gene3D G3DSA:3.30.70.240 410 499 4.1E-25 T 26-04-2016 IPR000640 Translation elongation factor EFG, V domain smi_1021 136c0f4a5d4cffa48e56a826bf98ce12 607 PANTHER PTHR23115 406 605 2.0E-291 T 26-04-2016 smi_1021 136c0f4a5d4cffa48e56a826bf98ce12 607 PANTHER PTHR23115 1 382 2.0E-291 T 26-04-2016 smi_1021 136c0f4a5d4cffa48e56a826bf98ce12 607 Pfam PF00679 Elongation factor G C-terminus 408 495 3.2E-25 T 26-04-2016 IPR000640 Translation elongation factor EFG, V domain smi_1021 136c0f4a5d4cffa48e56a826bf98ce12 607 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 26-04-2016 IPR031157 Tr-type G domain, conserved site smi_1021 136c0f4a5d4cffa48e56a826bf98ce12 607 SUPERFAMILY SSF52540 5 209 4.67E-55 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1021 136c0f4a5d4cffa48e56a826bf98ce12 607 Gene3D G3DSA:3.40.50.300 6 202 1.8E-60 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1021 136c0f4a5d4cffa48e56a826bf98ce12 607 PANTHER PTHR23115:SF175 406 605 2.0E-291 T 26-04-2016 smi_1021 136c0f4a5d4cffa48e56a826bf98ce12 607 PANTHER PTHR23115:SF175 1 382 2.0E-291 T 26-04-2016 smi_1021 136c0f4a5d4cffa48e56a826bf98ce12 607 SUPERFAMILY SSF54980 301 379 1.15E-19 T 26-04-2016 IPR009022 Elongation factor G, III-V domain smi_1021 136c0f4a5d4cffa48e56a826bf98ce12 607 Pfam PF06421 GTP-binding protein LepA C-terminus 497 603 3.5E-50 T 26-04-2016 IPR013842 GTP-binding protein LepA, C-terminal smi_1021 136c0f4a5d4cffa48e56a826bf98ce12 607 Gene3D G3DSA:2.40.30.10 203 298 6.2E-24 T 26-04-2016 smi_1021 136c0f4a5d4cffa48e56a826bf98ce12 607 TIGRFAM TIGR01393 lepA: elongation factor 4 12 605 0.0 T 26-04-2016 IPR006297 Elongation factor 4 GO:0005525 smi_1021 136c0f4a5d4cffa48e56a826bf98ce12 607 SMART SM00838 407 495 3.4E-5 T 26-04-2016 IPR000640 Translation elongation factor EFG, V domain smi_1643 1131e7c382847a07a2c566be34e12968 401 Hamap MF_01582 Serine/threonine transporter SstT [sstT]. 1 401 35.234 T 26-04-2016 IPR023025 Serine/threonine transporter SstT GO:0015293|GO:0015826|GO:0032329 smi_1643 1131e7c382847a07a2c566be34e12968 401 Gene3D G3DSA:1.10.3860.10 5 396 1.8E-83 T 26-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 smi_1643 1131e7c382847a07a2c566be34e12968 401 PANTHER PTHR11958:SF68 4 395 5.1E-211 T 26-04-2016 smi_1643 1131e7c382847a07a2c566be34e12968 401 PANTHER PTHR11958 4 395 5.1E-211 T 26-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 smi_1643 1131e7c382847a07a2c566be34e12968 401 SUPERFAMILY SSF118215 13 394 1.96E-92 T 26-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 smi_1643 1131e7c382847a07a2c566be34e12968 401 Pfam PF00375 Sodium:dicarboxylate symporter family 13 393 5.4E-66 T 26-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 smi_1643 1131e7c382847a07a2c566be34e12968 401 PRINTS PR00173 Glutamate-aspartate symporter signature 9 29 9.7E-13 T 26-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 smi_1643 1131e7c382847a07a2c566be34e12968 401 PRINTS PR00173 Glutamate-aspartate symporter signature 138 160 9.7E-13 T 26-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 smi_1643 1131e7c382847a07a2c566be34e12968 401 PRINTS PR00173 Glutamate-aspartate symporter signature 319 338 9.7E-13 T 26-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 smi_1643 1131e7c382847a07a2c566be34e12968 401 PRINTS PR00173 Glutamate-aspartate symporter signature 217 236 9.7E-13 T 26-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 smi_1643 1131e7c382847a07a2c566be34e12968 401 PRINTS PR00173 Glutamate-aspartate symporter signature 284 310 9.7E-13 T 26-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 smi_1535 4ca737448363e2d9f4c57949a56d3656 418 PANTHER PTHR33498 1 414 1.3E-169 T 26-04-2016 smi_1535 4ca737448363e2d9f4c57949a56d3656 418 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 41 85 3.7E-11 T 26-04-2016 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger smi_1535 4ca737448363e2d9f4c57949a56d3656 418 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 91 141 1.2E-9 T 26-04-2016 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain smi_1535 4ca737448363e2d9f4c57949a56d3656 418 Pfam PF01610 Transposase 156 400 2.2E-50 T 26-04-2016 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain smi_1535 4ca737448363e2d9f4c57949a56d3656 418 PANTHER PTHR33498:SF1 1 414 1.3E-169 T 26-04-2016 smi_1535 4ca737448363e2d9f4c57949a56d3656 418 Gene3D G3DSA:1.10.10.60 103 140 1.6E-4 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 smi_2045 d46b373a3edd01792a9c22567098069d 810 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 322 334 - T 26-04-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 smi_2045 d46b373a3edd01792a9c22567098069d 810 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 545 563 6.5E-42 T 26-04-2016 IPR001270 ClpA/B family GO:0005524 smi_2045 d46b373a3edd01792a9c22567098069d 810 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 652 666 6.5E-42 T 26-04-2016 IPR001270 ClpA/B family GO:0005524 smi_2045 d46b373a3edd01792a9c22567098069d 810 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 590 608 6.5E-42 T 26-04-2016 IPR001270 ClpA/B family GO:0005524 smi_2045 d46b373a3edd01792a9c22567098069d 810 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 619 637 6.5E-42 T 26-04-2016 IPR001270 ClpA/B family GO:0005524 smi_2045 d46b373a3edd01792a9c22567098069d 810 PANTHER PTHR11638 2 139 0.0 T 26-04-2016 smi_2045 d46b373a3edd01792a9c22567098069d 810 PANTHER PTHR11638 177 809 0.0 T 26-04-2016 smi_2045 d46b373a3edd01792a9c22567098069d 810 Gene3D G3DSA:3.40.50.300 701 728 1.6E-53 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_2045 d46b373a3edd01792a9c22567098069d 810 Gene3D G3DSA:3.40.50.300 494 667 1.6E-53 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_2045 d46b373a3edd01792a9c22567098069d 810 SUPERFAMILY SSF81923 3 133 3.53E-15 T 26-04-2016 IPR004176 Clp, N-terminal GO:0019538 smi_2045 d46b373a3edd01792a9c22567098069d 810 PANTHER PTHR11638:SF18 2 139 0.0 T 26-04-2016 smi_2045 d46b373a3edd01792a9c22567098069d 810 PANTHER PTHR11638:SF18 177 809 0.0 T 26-04-2016 smi_2045 d46b373a3edd01792a9c22567098069d 810 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 718 797 1.6E-22 T 26-04-2016 IPR019489 Clp ATPase, C-terminal smi_2045 d46b373a3edd01792a9c22567098069d 810 Gene3D G3DSA:1.10.8.60 729 808 2.4E-28 T 26-04-2016 smi_2045 d46b373a3edd01792a9c22567098069d 810 SMART SM01086 718 807 1.9E-31 T 26-04-2016 IPR019489 Clp ATPase, C-terminal smi_2045 d46b373a3edd01792a9c22567098069d 810 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 231 362 2.9E-12 T 26-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 smi_2045 d46b373a3edd01792a9c22567098069d 810 SUPERFAMILY SSF52540 490 796 1.08E-74 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_2045 d46b373a3edd01792a9c22567098069d 810 Gene3D G3DSA:1.10.8.60 372 439 2.6E-26 T 26-04-2016 smi_2045 d46b373a3edd01792a9c22567098069d 810 SMART SM00382 226 371 8.6E-10 T 26-04-2016 IPR003593 AAA+ ATPase domain smi_2045 d46b373a3edd01792a9c22567098069d 810 SMART SM00382 541 681 3.1E-11 T 26-04-2016 IPR003593 AAA+ ATPase domain smi_2045 d46b373a3edd01792a9c22567098069d 810 SUPERFAMILY SSF52540 189 445 6.76E-63 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_2045 d46b373a3edd01792a9c22567098069d 810 Gene3D G3DSA:1.10.1780.10 2 139 8.6E-21 T 26-04-2016 IPR004176 Clp, N-terminal GO:0019538 smi_2045 d46b373a3edd01792a9c22567098069d 810 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 575 593 - T 26-04-2016 IPR028299 ClpA/B, conserved site 2 smi_2045 d46b373a3edd01792a9c22567098069d 810 Gene3D G3DSA:3.40.50.300 189 370 2.3E-42 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_2045 d46b373a3edd01792a9c22567098069d 810 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 102 139 5.7E-6 T 26-04-2016 IPR004176 Clp, N-terminal GO:0019538 smi_2045 d46b373a3edd01792a9c22567098069d 810 Pfam PF07724 AAA domain (Cdc48 subfamily) 540 711 4.4E-53 T 26-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 smi_1492 89a4b392306ab90fd311400cc2c1e299 486 PANTHER PTHR11098:SF1 9 478 3.3E-205 T 26-04-2016 smi_1492 89a4b392306ab90fd311400cc2c1e299 486 TIGRFAM TIGR01513 NAPRTase_put: nicotinate phosphoribosyltransferase 8 463 1.9E-197 T 26-04-2016 IPR006405 Nicotinate phosphoribosyltransferase pncB-type GO:0004516|GO:0019358 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 smi_1492 89a4b392306ab90fd311400cc2c1e299 486 Pfam PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family 153 334 1.9E-11 T 26-04-2016 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 smi_1492 89a4b392306ab90fd311400cc2c1e299 486 PIRSF PIRSF000484 3 478 3.7E-150 T 26-04-2016 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 smi_1492 89a4b392306ab90fd311400cc2c1e299 486 SUPERFAMILY SSF54675 1 136 5.3E-49 T 26-04-2016 smi_1492 89a4b392306ab90fd311400cc2c1e299 486 Gene3D G3DSA:3.20.140.10 3 380 1.4E-132 T 26-04-2016 smi_1492 89a4b392306ab90fd311400cc2c1e299 486 PANTHER PTHR11098 9 478 3.3E-205 T 26-04-2016 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 smi_1492 89a4b392306ab90fd311400cc2c1e299 486 SUPERFAMILY SSF51690 137 476 3.83E-127 T 26-04-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 smi_1315 15250a8ed6c2244b8eb2b4588fdba41f 66 PRINTS PR00124 ATP synthase C subunit signature 3 22 1.2E-7 T 26-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 smi_1315 15250a8ed6c2244b8eb2b4588fdba41f 66 PRINTS PR00124 ATP synthase C subunit signature 24 39 1.2E-7 T 26-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 smi_1315 15250a8ed6c2244b8eb2b4588fdba41f 66 PRINTS PR00124 ATP synthase C subunit signature 41 66 1.2E-7 T 26-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 smi_1315 15250a8ed6c2244b8eb2b4588fdba41f 66 SUPERFAMILY SSF81333 4 65 3.66E-13 T 26-04-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 smi_1315 15250a8ed6c2244b8eb2b4588fdba41f 66 ProSitePatterns PS00605 ATP synthase c subunit signature. 31 52 - T 26-04-2016 IPR020537 ATPase, F0 complex, subunit C, DCCD-binding site smi_1315 15250a8ed6c2244b8eb2b4588fdba41f 66 Pfam PF00137 ATP synthase subunit C 7 65 9.6E-8 T 26-04-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 smi_1315 15250a8ed6c2244b8eb2b4588fdba41f 66 Gene3D G3DSA:1.20.20.10 6 65 5.5E-18 T 26-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 smi_1902 96f79e9177517a727d3026aa7ffddd7e 277 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 125 251 1.2E-55 T 26-04-2016 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 smi_1902 96f79e9177517a727d3026aa7ffddd7e 277 PANTHER PTHR13691 3 276 4.1E-147 T 26-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_1902 96f79e9177517a727d3026aa7ffddd7e 277 SMART SM01383 42 118 1.2E-46 T 26-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_1902 96f79e9177517a727d3026aa7ffddd7e 277 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 118 5.8E-35 T 26-04-2016 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_1902 96f79e9177517a727d3026aa7ffddd7e 277 Gene3D G3DSA:4.10.950.10 196 274 1.9E-33 T 26-04-2016 IPR014726 Ribosomal protein L2, domain 3 smi_1902 96f79e9177517a727d3026aa7ffddd7e 277 Gene3D G3DSA:2.40.50.140 2 114 6.4E-52 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold smi_1902 96f79e9177517a727d3026aa7ffddd7e 277 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 275 48.158 T 26-04-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 smi_1902 96f79e9177517a727d3026aa7ffddd7e 277 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 26-04-2016 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 smi_1902 96f79e9177517a727d3026aa7ffddd7e 277 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 3 275 1.9E-135 T 26-04-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 smi_1902 96f79e9177517a727d3026aa7ffddd7e 277 SMART SM01382 124 253 1.4E-87 T 26-04-2016 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 smi_1902 96f79e9177517a727d3026aa7ffddd7e 277 Gene3D G3DSA:2.30.30.30 118 195 2.8E-35 T 26-04-2016 IPR014722 Ribosomal protein L2 domain 2 smi_1902 96f79e9177517a727d3026aa7ffddd7e 277 SUPERFAMILY SSF50249 3 125 3.19E-51 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold smi_1902 96f79e9177517a727d3026aa7ffddd7e 277 PIRSF PIRSF002158 6 276 1.4E-98 T 26-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_1902 96f79e9177517a727d3026aa7ffddd7e 277 SUPERFAMILY SSF50104 126 273 4.69E-58 T 26-04-2016 IPR008991 Translation protein SH3-like domain smi_1738 233f869dfb2d13ab01039503be6ffa23 788 PANTHER PTHR10887 662 785 1.5E-110 T 26-04-2016 smi_1738 233f869dfb2d13ab01039503be6ffa23 788 PANTHER PTHR10887 329 589 1.5E-110 T 26-04-2016 smi_1738 233f869dfb2d13ab01039503be6ffa23 788 PANTHER PTHR10887 9 35 1.5E-110 T 26-04-2016 smi_1738 233f869dfb2d13ab01039503be6ffa23 788 Gene3D G3DSA:3.40.50.300 660 743 3.3E-21 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1738 233f869dfb2d13ab01039503be6ffa23 788 Gene3D G3DSA:3.40.50.300 155 166 3.3E-21 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1738 233f869dfb2d13ab01039503be6ffa23 788 Pfam PF13604 AAA domain 332 522 6.8E-41 T 26-04-2016 smi_1738 233f869dfb2d13ab01039503be6ffa23 788 Hamap MF_01488 ATP-dependent RecD-like DNA helicase [recD2]. 2 737 27.912 T 26-04-2016 IPR006345 DNA helicase, RecD-like GO:0003677|GO:0032508|GO:0043141 smi_1738 233f869dfb2d13ab01039503be6ffa23 788 PANTHER PTHR10887:SF284 662 785 1.5E-110 T 26-04-2016 smi_1738 233f869dfb2d13ab01039503be6ffa23 788 PANTHER PTHR10887:SF284 329 589 1.5E-110 T 26-04-2016 smi_1738 233f869dfb2d13ab01039503be6ffa23 788 PANTHER PTHR10887:SF284 9 35 1.5E-110 T 26-04-2016 smi_1738 233f869dfb2d13ab01039503be6ffa23 788 TIGRFAM TIGR01448 recD_rel: helicase, RecD/TraA family 5 734 0.0 T 26-04-2016 IPR006345 DNA helicase, RecD-like GO:0003677|GO:0032508|GO:0043141 smi_1738 233f869dfb2d13ab01039503be6ffa23 788 Pfam PF13538 UvrD-like helicase C-terminal domain 662 708 5.3E-19 T 26-04-2016 IPR027785 UvrD-like helicase C-terminal domain smi_1738 233f869dfb2d13ab01039503be6ffa23 788 Gene3D G3DSA:3.40.50.300 290 519 1.9E-47 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1738 233f869dfb2d13ab01039503be6ffa23 788 Pfam PF14490 Helix-hairpin-helix containing domain 148 237 3.4E-25 T 26-04-2016 IPR029493 RecD helicase-like helix-hairpin-helix domain smi_1738 233f869dfb2d13ab01039503be6ffa23 788 SUPERFAMILY SSF52540 186 497 8.46E-42 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1738 233f869dfb2d13ab01039503be6ffa23 788 SUPERFAMILY SSF52540 554 734 1.15E-56 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1738 233f869dfb2d13ab01039503be6ffa23 788 SUPERFAMILY SSF52540 450 515 1.15E-56 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0570 55e2e2dcf27a6a73757717d6e7c56fa2 238 Pfam PF13394 4Fe-4S single cluster domain 31 113 3.7E-10 T 26-04-2016 smi_0570 55e2e2dcf27a6a73757717d6e7c56fa2 238 Gene3D G3DSA:3.20.20.70 25 125 1.2E-12 T 26-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 smi_0570 55e2e2dcf27a6a73757717d6e7c56fa2 238 Pfam PF04055 Radical SAM superfamily 33 126 6.2E-10 T 26-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 smi_0570 55e2e2dcf27a6a73757717d6e7c56fa2 238 SUPERFAMILY SSF102114 31 121 5.76E-12 T 26-04-2016 smi_0570 55e2e2dcf27a6a73757717d6e7c56fa2 238 PANTHER PTHR11228:SF6 1 228 2.8E-38 T 26-04-2016 smi_0570 55e2e2dcf27a6a73757717d6e7c56fa2 238 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 9 235 32.475 T 26-04-2016 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703|UniPathway: UPA00391 smi_0570 55e2e2dcf27a6a73757717d6e7c56fa2 238 TIGRFAM TIGR03365 Bsubt_queE: 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE 8 238 3.0E-100 T 26-04-2016 IPR017742 7-carboxy-7-deazaguanine synthase KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703|UniPathway: UPA00391 smi_0570 55e2e2dcf27a6a73757717d6e7c56fa2 238 PANTHER PTHR11228 1 228 2.8E-38 T 26-04-2016 smi_0570 55e2e2dcf27a6a73757717d6e7c56fa2 238 PIRSF PIRSF000370 7 238 1.2E-45 T 26-04-2016 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703|UniPathway: UPA00391 smi_0108 32c2a2b55e7418307c721b1556f34688 676 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 397 453 5.7E-5 T 26-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 smi_0108 32c2a2b55e7418307c721b1556f34688 676 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 533 674 2.5E-31 T 26-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- smi_0108 32c2a2b55e7418307c721b1556f34688 676 Gene3D G3DSA:3.40.930.10 530 675 2.0E-49 T 26-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- smi_0108 32c2a2b55e7418307c721b1556f34688 676 SUPERFAMILY SSF52794 395 473 2.25E-6 T 26-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 smi_0108 32c2a2b55e7418307c721b1556f34688 676 SUPERFAMILY SSF55804 529 674 1.83E-35 T 26-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 smi_0108 32c2a2b55e7418307c721b1556f34688 676 PANTHER PTHR36203 1 676 8.9E-74 T 26-04-2016 smi_0108 32c2a2b55e7418307c721b1556f34688 676 Pfam PF00874 PRD domain 295 383 2.6E-17 T 26-04-2016 IPR011608 PRD domain GO:0006355 smi_0108 32c2a2b55e7418307c721b1556f34688 676 SUPERFAMILY SSF63520 266 387 2.62E-20 T 26-04-2016 IPR011608 PRD domain GO:0006355 smi_0108 32c2a2b55e7418307c721b1556f34688 676 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 579 595 - T 26-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- smi_0108 32c2a2b55e7418307c721b1556f34688 676 Gene3D G3DSA:1.10.1790.10 289 386 1.3E-15 T 26-04-2016 IPR011608 PRD domain GO:0006355 smi_1950 c96767e803178300583e83f5667ce845 287 PANTHER PTHR37038:SF1 5 285 9.6E-108 T 26-04-2016 smi_1950 c96767e803178300583e83f5667ce845 287 SUPERFAMILY SSF47413 5 65 2.53E-8 T 26-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 smi_1950 c96767e803178300583e83f5667ce845 287 PANTHER PTHR37038 5 285 9.6E-108 T 26-04-2016 smi_1950 c96767e803178300583e83f5667ce845 287 Pfam PF01381 Helix-turn-helix 12 64 2.1E-5 T 26-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 smi_1950 c96767e803178300583e83f5667ce845 287 SMART SM00530 10 64 3.1E-6 T 26-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 smi_1950 c96767e803178300583e83f5667ce845 287 TIGRFAM TIGR01716 RGG_Cterm: transcriptional activator, Rgg/GadR/MutR family, C-terminal domain 66 284 1.9E-65 T 26-04-2016 IPR010057 Transcription activator MutR, C-terminal smi_1950 c96767e803178300583e83f5667ce845 287 Gene3D G3DSA:1.10.260.40 3 64 9.2E-8 T 26-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 smi_0582 64b48a4ad2191e6b831c2b6e38dc66fe 157 Pfam PF03477 ATP cone domain 50 136 1.9E-20 T 26-04-2016 IPR005144 ATP-cone domain smi_0582 64b48a4ad2191e6b831c2b6e38dc66fe 157 PANTHER PTHR30455:SF2 2 156 1.8E-68 T 26-04-2016 smi_0582 64b48a4ad2191e6b831c2b6e38dc66fe 157 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 153 82.822 T 26-04-2016 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 smi_0582 64b48a4ad2191e6b831c2b6e38dc66fe 157 PANTHER PTHR30455 2 156 1.8E-68 T 26-04-2016 smi_0582 64b48a4ad2191e6b831c2b6e38dc66fe 157 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 146 5.1E-57 T 26-04-2016 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 smi_0582 64b48a4ad2191e6b831c2b6e38dc66fe 157 Gene3D G3DSA:2.20.25.10 2 42 9.2E-4 T 26-04-2016 smi_1638 ae8ccfcffe151c6ac68789212873e8e5 103 Pfam PF01985 CRS1 / YhbY (CRM) domain 3 86 9.4E-20 T 26-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 smi_1638 ae8ccfcffe151c6ac68789212873e8e5 103 PANTHER PTHR31846 1 91 1.4E-30 T 26-04-2016 smi_1638 ae8ccfcffe151c6ac68789212873e8e5 103 SUPERFAMILY SSF75471 1 96 2.62E-26 T 26-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 smi_1638 ae8ccfcffe151c6ac68789212873e8e5 103 SMART SM01103 3 86 9.6E-33 T 26-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 smi_1638 ae8ccfcffe151c6ac68789212873e8e5 103 TIGRFAM TIGR00253 RNA_bind_YhbY: putative RNA-binding protein, YhbY family 3 97 3.1E-25 T 26-04-2016 IPR017924 RNA-binding protein YhbY GO:0003723 smi_1638 ae8ccfcffe151c6ac68789212873e8e5 103 Gene3D G3DSA:3.30.110.60 1 97 1.1E-29 T 26-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 smi_1638 ae8ccfcffe151c6ac68789212873e8e5 103 ProDom PD010559 RNA-BINDING YHBY UPF0044 PREDICTED RNA RIBOSOMAL CONTAINING KH BINDING DOMAIN 10 97 5.0E-44 T 26-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 smi_1344 f64ae504274060d289cb3d602dcff24c 298 Pfam PF00892 EamA-like transporter family 158 290 3.8E-14 T 26-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 smi_1344 f64ae504274060d289cb3d602dcff24c 298 Pfam PF00892 EamA-like transporter family 6 144 2.2E-18 T 26-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 smi_1344 f64ae504274060d289cb3d602dcff24c 298 SUPERFAMILY SSF103481 193 293 1.11E-9 T 26-04-2016 smi_1344 f64ae504274060d289cb3d602dcff24c 298 PANTHER PTHR22911:SF65 1 298 1.8E-135 T 26-04-2016 smi_1344 f64ae504274060d289cb3d602dcff24c 298 PANTHER PTHR22911 1 298 1.8E-135 T 26-04-2016 smi_1344 f64ae504274060d289cb3d602dcff24c 298 SUPERFAMILY SSF103481 43 148 1.12E-11 T 26-04-2016 smi_0224 df0964677d4a009b32818e684963b52d 235 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 11 198 1.1E-44 T 26-04-2016 IPR001303 Class II aldolase/adducin N-terminal smi_0224 df0964677d4a009b32818e684963b52d 235 PANTHER PTHR22789:SF8 1 233 5.1E-150 T 26-04-2016 smi_0224 df0964677d4a009b32818e684963b52d 235 PANTHER PTHR22789 1 233 5.1E-150 T 26-04-2016 smi_0224 df0964677d4a009b32818e684963b52d 235 Gene3D G3DSA:3.40.225.10 6 233 1.8E-70 T 26-04-2016 IPR001303 Class II aldolase/adducin N-terminal smi_0224 df0964677d4a009b32818e684963b52d 235 SUPERFAMILY SSF53639 6 225 2.75E-69 T 26-04-2016 IPR001303 Class II aldolase/adducin N-terminal smi_0224 df0964677d4a009b32818e684963b52d 235 SMART SM01007 10 200 7.8E-63 T 26-04-2016 IPR001303 Class II aldolase/adducin N-terminal smi_0928 1ccaa2d4336ac329873a3f8b3b217491 89 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 31 72 1.0E-17 T 26-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_0928 1ccaa2d4336ac329873a3f8b3b217491 89 SUPERFAMILY SSF110324 5 86 1.33E-31 T 26-04-2016 smi_0928 1ccaa2d4336ac329873a3f8b3b217491 89 PANTHER PTHR15893 1 88 1.0E-44 T 26-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_0928 1ccaa2d4336ac329873a3f8b3b217491 89 ProSitePatterns PS00831 Ribosomal protein L27 signature. 37 51 - T 26-04-2016 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_0928 1ccaa2d4336ac329873a3f8b3b217491 89 PRINTS PR00063 Ribosomal protein L27 signature 57 81 2.0E-36 T 26-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_0928 1ccaa2d4336ac329873a3f8b3b217491 89 PRINTS PR00063 Ribosomal protein L27 signature 32 56 2.0E-36 T 26-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_0928 1ccaa2d4336ac329873a3f8b3b217491 89 PRINTS PR00063 Ribosomal protein L27 signature 7 31 2.0E-36 T 26-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_0928 1ccaa2d4336ac329873a3f8b3b217491 89 TIGRFAM TIGR00062 L27: ribosomal protein bL27 4 84 1.3E-37 T 26-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_0928 1ccaa2d4336ac329873a3f8b3b217491 89 Pfam PF01016 Ribosomal L27 protein 5 84 7.7E-34 T 26-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_0928 1ccaa2d4336ac329873a3f8b3b217491 89 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 4 87 26.536 T 26-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_0928 1ccaa2d4336ac329873a3f8b3b217491 89 Gene3D G3DSA:2.40.50.100 23 87 2.5E-30 T 26-04-2016 smi_0746 3f009522617360330eb6fc87de3ee293 356 PANTHER PTHR30222 11 355 7.2E-122 T 26-04-2016 smi_0746 3f009522617360330eb6fc87de3ee293 356 SUPERFAMILY SSF53850 35 352 2.11E-95 T 26-04-2016 smi_0746 3f009522617360330eb6fc87de3ee293 356 Gene3D G3DSA:3.40.190.10 141 276 1.5E-19 T 26-04-2016 smi_0746 3f009522617360330eb6fc87de3ee293 356 PIRSF PIRSF019574 1 355 1.3E-125 T 26-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 smi_0746 3f009522617360330eb6fc87de3ee293 356 PANTHER PTHR30222:SF5 11 355 7.2E-122 T 26-04-2016 smi_0746 3f009522617360330eb6fc87de3ee293 356 Gene3D G3DSA:3.40.190.10 34 139 5.2E-67 T 26-04-2016 smi_0746 3f009522617360330eb6fc87de3ee293 356 Gene3D G3DSA:3.40.190.10 277 320 5.2E-67 T 26-04-2016 smi_0746 3f009522617360330eb6fc87de3ee293 356 Pfam PF13416 Bacterial extracellular solute-binding protein 50 320 3.1E-39 T 26-04-2016 smi_0746 3f009522617360330eb6fc87de3ee293 356 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 83 97 3.5E-59 T 26-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 smi_0746 3f009522617360330eb6fc87de3ee293 356 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 40 56 3.5E-59 T 26-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 smi_0746 3f009522617360330eb6fc87de3ee293 356 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 56 77 3.5E-59 T 26-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 smi_0746 3f009522617360330eb6fc87de3ee293 356 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 210 229 3.5E-59 T 26-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 smi_0746 3f009522617360330eb6fc87de3ee293 356 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 130 146 3.5E-59 T 26-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 smi_0746 3f009522617360330eb6fc87de3ee293 356 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 254 273 3.5E-59 T 26-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 smi_0746 3f009522617360330eb6fc87de3ee293 356 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 299 325 3.5E-59 T 26-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 smi_0746 3f009522617360330eb6fc87de3ee293 356 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 99 112 3.5E-59 T 26-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 smi_0746 3f009522617360330eb6fc87de3ee293 356 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 173 192 3.5E-59 T 26-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 smi_0746 3f009522617360330eb6fc87de3ee293 356 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 155 169 3.5E-59 T 26-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 smi_1412 aee754548038fb762407cebd54b0e24e 254 SUPERFAMILY SSF52540 3 250 1.04E-65 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1412 aee754548038fb762407cebd54b0e24e 254 SMART SM00382 28 228 4.4E-11 T 26-04-2016 IPR003593 AAA+ ATPase domain smi_1412 aee754548038fb762407cebd54b0e24e 254 PANTHER PTHR24220 5 110 8.8E-126 T 26-04-2016 smi_1412 aee754548038fb762407cebd54b0e24e 254 PANTHER PTHR24220 126 254 8.8E-126 T 26-04-2016 smi_1412 aee754548038fb762407cebd54b0e24e 254 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 229 251 4.7E-11 T 26-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal smi_1412 aee754548038fb762407cebd54b0e24e 254 Gene3D G3DSA:3.40.50.300 3 249 3.2E-72 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1412 aee754548038fb762407cebd54b0e24e 254 ProSitePatterns PS00211 ABC transporters family signature. 152 166 - T 26-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 smi_1412 aee754548038fb762407cebd54b0e24e 254 Pfam PF00005 ABC transporter 21 179 5.7E-32 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 smi_1412 aee754548038fb762407cebd54b0e24e 254 PANTHER PTHR24220:SF358 5 110 8.8E-126 T 26-04-2016 smi_1412 aee754548038fb762407cebd54b0e24e 254 PANTHER PTHR24220:SF358 126 254 8.8E-126 T 26-04-2016 smi_1572 cc43c7e1a8ad028d963a7d3bdf671364 156 PANTHER PTHR23089:SF13 1 145 3.1E-78 T 26-04-2016 smi_1572 cc43c7e1a8ad028d963a7d3bdf671364 156 Pfam PF01230 HIT domain 38 103 7.8E-6 T 26-04-2016 IPR001310 Histidine triad (HIT) protein smi_1572 cc43c7e1a8ad028d963a7d3bdf671364 156 Gene3D G3DSA:3.30.428.10 2 150 7.7E-33 T 26-04-2016 IPR011146 HIT-like domain GO:0003824 smi_1572 cc43c7e1a8ad028d963a7d3bdf671364 156 SUPERFAMILY SSF54197 1 146 7.49E-28 T 26-04-2016 IPR011146 HIT-like domain GO:0003824 smi_1572 cc43c7e1a8ad028d963a7d3bdf671364 156 PANTHER PTHR23089 1 145 3.1E-78 T 26-04-2016 IPR001310 Histidine triad (HIT) protein smi_1057 f7e5aab3f2bb11a82f38a5bf433a9f8d 422 Gene3D G3DSA:2.30.40.10 1 68 3.2E-23 T 26-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 smi_1057 f7e5aab3f2bb11a82f38a5bf433a9f8d 422 ProSitePatterns PS00482 Dihydroorotase signature 1. 57 65 - T 26-04-2016 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 smi_1057 f7e5aab3f2bb11a82f38a5bf433a9f8d 422 SUPERFAMILY SSF51556 54 364 1.25E-92 T 26-04-2016 IPR032466 Metal-dependent hydrolase smi_1057 f7e5aab3f2bb11a82f38a5bf433a9f8d 422 SUPERFAMILY SSF51338 2 53 2.39E-25 T 26-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 smi_1057 f7e5aab3f2bb11a82f38a5bf433a9f8d 422 SUPERFAMILY SSF51338 366 422 2.39E-25 T 26-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 smi_1057 f7e5aab3f2bb11a82f38a5bf433a9f8d 422 PANTHER PTHR11647 1 422 1.8E-177 T 26-04-2016 smi_1057 f7e5aab3f2bb11a82f38a5bf433a9f8d 422 Pfam PF01979 Amidohydrolase family 50 419 6.8E-34 T 26-04-2016 IPR006680 Amidohydrolase-related GO:0016787 smi_1057 f7e5aab3f2bb11a82f38a5bf433a9f8d 422 TIGRFAM TIGR00857 pyrC_multi: dihydroorotase, multifunctional complex type 21 421 6.3E-108 T 26-04-2016 IPR004722 Dihydroorotase GO:0004151|GO:0006221|GO:0046872 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 smi_1057 f7e5aab3f2bb11a82f38a5bf433a9f8d 422 PANTHER PTHR11647:SF70 1 422 1.8E-177 T 26-04-2016 smi_1057 f7e5aab3f2bb11a82f38a5bf433a9f8d 422 ProSitePatterns PS00483 Dihydroorotase signature 2. 301 312 - T 26-04-2016 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 smi_1057 f7e5aab3f2bb11a82f38a5bf433a9f8d 422 Hamap MF_00220_B Dihydroorotase [pyrC]. 1 422 37.898 T 26-04-2016 IPR004722 Dihydroorotase GO:0004151|GO:0006221|GO:0046872 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 smi_1057 f7e5aab3f2bb11a82f38a5bf433a9f8d 422 Gene3D G3DSA:3.20.20.140 69 420 5.7E-95 T 26-04-2016 smi_0601 d3827df13da82de92905d063d77c3d58 1907 Gene3D G3DSA:2.40.10.10 487 580 2.0E-6 T 26-04-2016 smi_0601 d3827df13da82de92905d063d77c3d58 1907 Gene3D G3DSA:2.40.10.10 84 179 1.5E-4 T 26-04-2016 smi_0601 d3827df13da82de92905d063d77c3d58 1907 Gene3D G3DSA:2.40.10.10 192 300 4.7E-14 T 26-04-2016 smi_0601 d3827df13da82de92905d063d77c3d58 1907 Gene3D G3DSA:2.40.10.10 581 679 1.1E-10 T 26-04-2016 smi_0601 d3827df13da82de92905d063d77c3d58 1907 Pfam PF02973 Sialidase, N-terminal domain 782 972 6.6E-64 T 26-04-2016 IPR004124 Glycoside hydrolase, family 33, N-terminal GO:0004308|GO:0005975 KEGG: 00511+3.2.1.18|KEGG: 00600+3.2.1.18 smi_0601 d3827df13da82de92905d063d77c3d58 1907 TIGRFAM TIGR01167 LPXTG_anchor: LPXTG cell wall anchor domain 1875 1905 2.5E-4 T 26-04-2016 IPR019931 LPXTG cell wall anchor domain smi_0601 d3827df13da82de92905d063d77c3d58 1907 SUPERFAMILY SSF50494 48 303 1.07E-20 T 26-04-2016 IPR009003 Peptidase S1, PA clan smi_0601 d3827df13da82de92905d063d77c3d58 1907 Pfam PF13088 BNR repeat-like domain 1200 1429 3.4E-20 T 26-04-2016 IPR011040 Sialidases smi_0601 d3827df13da82de92905d063d77c3d58 1907 PANTHER PTHR10628:SF5 1178 1590 5.0E-124 T 26-04-2016 smi_0601 d3827df13da82de92905d063d77c3d58 1907 PANTHER PTHR10628:SF5 939 1096 5.0E-124 T 26-04-2016 smi_0601 d3827df13da82de92905d063d77c3d58 1907 Gene3D G3DSA:2.120.10.10 1004 1107 8.8E-85 T 26-04-2016 IPR011040 Sialidases smi_0601 d3827df13da82de92905d063d77c3d58 1907 Gene3D G3DSA:2.120.10.10 1189 1456 8.8E-85 T 26-04-2016 IPR011040 Sialidases smi_0601 d3827df13da82de92905d063d77c3d58 1907 Gene3D G3DSA:2.10.270.10 308 354 3.0E-7 T 26-04-2016 smi_0601 d3827df13da82de92905d063d77c3d58 1907 PANTHER PTHR10628 1178 1590 5.0E-124 T 26-04-2016 IPR026856 Sialidase family GO:0004308 KEGG: 00511+3.2.1.18|KEGG: 00600+3.2.1.18 smi_0601 d3827df13da82de92905d063d77c3d58 1907 PANTHER PTHR10628 939 1096 5.0E-124 T 26-04-2016 IPR026856 Sialidase family GO:0004308 KEGG: 00511+3.2.1.18|KEGG: 00600+3.2.1.18 smi_0601 d3827df13da82de92905d063d77c3d58 1907 Pfam PF13365 Trypsin-like peptidase domain 500 654 5.7E-10 T 26-04-2016 smi_0601 d3827df13da82de92905d063d77c3d58 1907 Pfam PF13365 Trypsin-like peptidase domain 87 270 2.7E-12 T 26-04-2016 smi_0601 d3827df13da82de92905d063d77c3d58 1907 Gene3D G3DSA:2.60.120.200 783 971 9.1E-47 T 26-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain smi_0601 d3827df13da82de92905d063d77c3d58 1907 SUPERFAMILY SSF50494 472 662 2.49E-19 T 26-04-2016 IPR009003 Peptidase S1, PA clan smi_0601 d3827df13da82de92905d063d77c3d58 1907 SUPERFAMILY SSF49899 784 965 3.89E-25 T 26-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain smi_0601 d3827df13da82de92905d063d77c3d58 1907 SUPERFAMILY SSF50939 1195 1455 1.37E-81 T 26-04-2016 IPR011040 Sialidases smi_0601 d3827df13da82de92905d063d77c3d58 1907 SUPERFAMILY SSF50939 1003 1108 1.37E-81 T 26-04-2016 IPR011040 Sialidases smi_0601 d3827df13da82de92905d063d77c3d58 1907 SMART SM00020 475 677 0.0032 T 26-04-2016 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 smi_0601 d3827df13da82de92905d063d77c3d58 1907 PRINTS PR00839 V8 serine protease family signature 262 274 8.4E-7 T 26-04-2016 IPR008256 Peptidase S1B GO:0006508|GO:0008236 smi_0601 d3827df13da82de92905d063d77c3d58 1907 PRINTS PR00839 V8 serine protease family signature 87 104 8.4E-7 T 26-04-2016 IPR008256 Peptidase S1B GO:0006508|GO:0008236 smi_0601 d3827df13da82de92905d063d77c3d58 1907 PRINTS PR00839 V8 serine protease family signature 197 210 8.4E-7 T 26-04-2016 IPR008256 Peptidase S1B GO:0006508|GO:0008236 smi_2061 1c30aed7d85f70ef23e8f14625fdcce9 346 SUPERFAMILY SSF54713 249 340 1.7E-38 T 26-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 smi_2061 1c30aed7d85f70ef23e8f14625fdcce9 346 SUPERFAMILY SSF54713 152 206 1.7E-38 T 26-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 smi_2061 1c30aed7d85f70ef23e8f14625fdcce9 346 Pfam PF00889 Elongation factor TS 71 323 5.4E-67 T 26-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 smi_2061 1c30aed7d85f70ef23e8f14625fdcce9 346 SUPERFAMILY SSF54713 56 146 3.92E-20 T 26-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 smi_2061 1c30aed7d85f70ef23e8f14625fdcce9 346 ProSitePatterns PS01127 Elongation factor Ts signature 2. 75 85 - T 26-04-2016 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 smi_2061 1c30aed7d85f70ef23e8f14625fdcce9 346 Gene3D G3DSA:3.30.479.20 178 193 5.7E-30 T 26-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 smi_2061 1c30aed7d85f70ef23e8f14625fdcce9 346 Gene3D G3DSA:3.30.479.20 57 93 5.7E-30 T 26-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 smi_2061 1c30aed7d85f70ef23e8f14625fdcce9 346 Gene3D G3DSA:3.30.479.20 288 326 5.7E-30 T 26-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 smi_2061 1c30aed7d85f70ef23e8f14625fdcce9 346 PANTHER PTHR11741 1 209 1.8E-118 T 26-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 smi_2061 1c30aed7d85f70ef23e8f14625fdcce9 346 PANTHER PTHR11741 252 343 1.8E-118 T 26-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 smi_2061 1c30aed7d85f70ef23e8f14625fdcce9 346 Hamap MF_00050 Elongation factor Ts [tsf]. 1 341 66.458 T 26-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 smi_2061 1c30aed7d85f70ef23e8f14625fdcce9 346 SUPERFAMILY SSF46934 3 56 2.18E-18 T 26-04-2016 IPR009060 UBA-like GO:0005515 smi_2061 1c30aed7d85f70ef23e8f14625fdcce9 346 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 340 1.7E-94 T 26-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 smi_2061 1c30aed7d85f70ef23e8f14625fdcce9 346 ProSitePatterns PS01126 Elongation factor Ts signature 1. 12 27 - T 26-04-2016 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 smi_2061 1c30aed7d85f70ef23e8f14625fdcce9 346 Gene3D G3DSA:1.10.286.20 241 277 3.3E-6 T 26-04-2016 smi_2061 1c30aed7d85f70ef23e8f14625fdcce9 346 Gene3D G3DSA:1.10.8.10 2 55 8.8E-26 T 26-04-2016 smi_0313 6a5d07d56394abc7633d07b8878f58bf 330 TIGRFAM TIGR00669 asnA: aspartate--ammonia ligase 1 330 1.0E-183 T 26-04-2016 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1|UniPathway: UPA00134 smi_0313 6a5d07d56394abc7633d07b8878f58bf 330 SUPERFAMILY SSF55681 5 330 3.25E-99 T 26-04-2016 smi_0313 6a5d07d56394abc7633d07b8878f58bf 330 PANTHER PTHR30073 1 330 4.2E-201 T 26-04-2016 smi_0313 6a5d07d56394abc7633d07b8878f58bf 330 Hamap MF_00555 Aspartate--ammonia ligase [asnA]. 1 330 47.173 T 26-04-2016 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1|UniPathway: UPA00134 smi_0313 6a5d07d56394abc7633d07b8878f58bf 330 PIRSF PIRSF001555 1 330 1.3E-158 T 26-04-2016 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1|UniPathway: UPA00134 smi_0313 6a5d07d56394abc7633d07b8878f58bf 330 Gene3D G3DSA:3.30.930.10 2 327 5.0E-157 T 26-04-2016 smi_0313 6a5d07d56394abc7633d07b8878f58bf 330 Pfam PF03590 Aspartate-ammonia ligase 9 243 7.2E-96 T 26-04-2016 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1|UniPathway: UPA00134 smi_0313 6a5d07d56394abc7633d07b8878f58bf 330 PANTHER PTHR30073:SF5 1 330 4.2E-201 T 26-04-2016 smi_0614 8ede5529f6e193290a3b3a36bf20987e 198 PANTHER PTHR30446:SF0 1 198 1.4E-107 T 26-04-2016 smi_0614 8ede5529f6e193290a3b3a36bf20987e 198 TIGRFAM TIGR00615 recR: recombination protein RecR 2 196 4.1E-80 T 26-04-2016 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 smi_0614 8ede5529f6e193290a3b3a36bf20987e 198 Pfam PF13662 Toprim domain 81 171 4.2E-21 T 26-04-2016 IPR006171 Toprim domain smi_0614 8ede5529f6e193290a3b3a36bf20987e 198 SUPERFAMILY SSF111304 1 198 8.76E-72 T 26-04-2016 IPR023627 Recombination protein RecR smi_0614 8ede5529f6e193290a3b3a36bf20987e 198 ProSitePatterns PS01300 RecR protein signature. 57 78 - T 26-04-2016 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 smi_0614 8ede5529f6e193290a3b3a36bf20987e 198 PANTHER PTHR30446 1 198 1.4E-107 T 26-04-2016 smi_0614 8ede5529f6e193290a3b3a36bf20987e 198 Pfam PF02132 RecR protein 39 78 2.2E-15 T 26-04-2016 IPR023628 Recombination protein RecR, C4-type zinc finger smi_0614 8ede5529f6e193290a3b3a36bf20987e 198 SMART SM00493 80 165 7.7E-9 T 26-04-2016 IPR006171 Toprim domain smi_0614 8ede5529f6e193290a3b3a36bf20987e 198 Hamap MF_00017 Recombination protein RecR [recR]. 1 198 98.73 T 26-04-2016 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 smi_1882 f963e06024c88d1f5d03cce62cab759d 38 SUPERFAMILY SSF57840 1 38 1.18E-17 T 26-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_1882 f963e06024c88d1f5d03cce62cab759d 38 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 10 38 3.0E-10 T 26-04-2016 smi_1882 f963e06024c88d1f5d03cce62cab759d 38 ProSitePatterns PS00828 Ribosomal protein L36 signature. 11 37 - T 26-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_1882 f963e06024c88d1f5d03cce62cab759d 38 Pfam PF00444 Ribosomal protein L36 1 38 6.1E-22 T 26-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_1882 f963e06024c88d1f5d03cce62cab759d 38 PANTHER PTHR18804 1 38 1.9E-20 T 26-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_1882 f963e06024c88d1f5d03cce62cab759d 38 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 38 18.368 T 26-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_1882 f963e06024c88d1f5d03cce62cab759d 38 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 38 8.6E-23 T 26-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_1698 7cf652d4402a031112bc60259b4284c5 605 Pfam PF00005 ABC transporter 372 521 1.3E-31 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 smi_1698 7cf652d4402a031112bc60259b4284c5 605 PANTHER PTHR24222:SF23 12 599 1.8E-215 T 26-04-2016 smi_1698 7cf652d4402a031112bc60259b4284c5 605 SMART SM00382 381 567 4.9E-15 T 26-04-2016 IPR003593 AAA+ ATPase domain smi_1698 7cf652d4402a031112bc60259b4284c5 605 Pfam PF00664 ABC transporter transmembrane region 37 300 6.5E-16 T 26-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 smi_1698 7cf652d4402a031112bc60259b4284c5 605 PANTHER PTHR24222 12 599 1.8E-215 T 26-04-2016 smi_1698 7cf652d4402a031112bc60259b4284c5 605 SUPERFAMILY SSF52540 348 590 1.41E-89 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1698 7cf652d4402a031112bc60259b4284c5 605 SUPERFAMILY SSF90123 12 338 1.11E-44 T 26-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 smi_1698 7cf652d4402a031112bc60259b4284c5 605 Gene3D G3DSA:3.40.50.300 354 587 7.0E-78 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1698 7cf652d4402a031112bc60259b4284c5 605 ProSitePatterns PS00211 ABC transporters family signature. 493 507 - T 26-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 smi_1698 7cf652d4402a031112bc60259b4284c5 605 Gene3D G3DSA:1.20.1560.10 17 338 3.6E-39 T 26-04-2016 smi_0361 efa482ab3760651e4967c8f4a18c7e96 243 Gene3D G3DSA:3.40.50.300 1 226 7.6E-62 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0361 efa482ab3760651e4967c8f4a18c7e96 243 SUPERFAMILY SSF52540 1 225 1.44E-57 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0361 efa482ab3760651e4967c8f4a18c7e96 243 PANTHER PTHR24220:SF160 3 227 6.8E-83 T 26-04-2016 smi_0361 efa482ab3760651e4967c8f4a18c7e96 243 SMART SM00382 26 210 5.7E-8 T 26-04-2016 IPR003593 AAA+ ATPase domain smi_0361 efa482ab3760651e4967c8f4a18c7e96 243 PANTHER PTHR24220 3 227 6.8E-83 T 26-04-2016 smi_0361 efa482ab3760651e4967c8f4a18c7e96 243 Pfam PF00005 ABC transporter 17 160 3.5E-30 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 smi_0361 efa482ab3760651e4967c8f4a18c7e96 243 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 26-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 smi_0347 f36d523beef2d2dbdf9eafced1e1d844 175 Pfam PF06081 Aromatic acid exporter family member 1 15 161 1.7E-15 T 26-04-2016 IPR010343 Aromatic acid exporter family member 1 smi_0667 bd2b04bc70240476b737acee250e5983 125 Pfam PF01266 FAD dependent oxidoreductase 2 100 1.1E-12 T 26-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 smi_0667 bd2b04bc70240476b737acee250e5983 125 PANTHER PTHR13847:SF211 1 121 9.8E-51 T 26-04-2016 smi_0667 bd2b04bc70240476b737acee250e5983 125 Gene3D G3DSA:3.30.9.10 2 54 5.8E-6 T 26-04-2016 smi_0667 bd2b04bc70240476b737acee250e5983 125 SUPERFAMILY SSF51905 49 118 4.92E-5 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 smi_0667 bd2b04bc70240476b737acee250e5983 125 SUPERFAMILY SSF54373 1 60 4.58E-7 T 26-04-2016 smi_0667 bd2b04bc70240476b737acee250e5983 125 Gene3D G3DSA:3.50.50.60 55 116 1.2E-8 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 smi_0667 bd2b04bc70240476b737acee250e5983 125 PANTHER PTHR13847 1 121 9.8E-51 T 26-04-2016 smi_0787 d16356573bb0c8f7a106a18c18f091cc 452 Gene3D G3DSA:3.40.50.150 1 207 4.2E-70 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase smi_0787 d16356573bb0c8f7a106a18c18f091cc 452 SUPERFAMILY SSF53335 373 446 1.56E-88 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase smi_0787 d16356573bb0c8f7a106a18c18f091cc 452 SUPERFAMILY SSF53335 1 298 1.56E-88 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase smi_0787 d16356573bb0c8f7a106a18c18f091cc 452 Gene3D G3DSA:3.90.120.10 260 307 1.7E-11 T 26-04-2016 smi_0787 d16356573bb0c8f7a106a18c18f091cc 452 TIGRFAM TIGR00675 dcm: DNA (cytosine-5-)-methyltransferase 3 441 1.5E-93 T 26-04-2016 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 smi_0787 d16356573bb0c8f7a106a18c18f091cc 452 Pfam PF00145 C-5 cytosine-specific DNA methylase 1 442 2.8E-90 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase smi_0787 d16356573bb0c8f7a106a18c18f091cc 452 PANTHER PTHR10629:SF31 220 451 1.4E-54 T 26-04-2016 smi_0787 d16356573bb0c8f7a106a18c18f091cc 452 PANTHER PTHR10629:SF31 1 167 1.4E-54 T 26-04-2016 smi_0787 d16356573bb0c8f7a106a18c18f091cc 452 ProSitePatterns PS00094 C-5 cytosine-specific DNA methylases active site. 69 81 - T 26-04-2016 IPR018117 DNA methylase, C-5 cytosine-specific, active site KEGG: 00270+2.1.1.37 smi_0787 d16356573bb0c8f7a106a18c18f091cc 452 ProSitePatterns PS00095 C-5 cytosine-specific DNA methylases C-terminal signature. 423 441 - T 26-04-2016 IPR031303 DNA methylase, C-5 cytosine-specific, conserved site KEGG: 00270+2.1.1.37 smi_0787 d16356573bb0c8f7a106a18c18f091cc 452 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 154 167 1.9E-19 T 26-04-2016 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 smi_0787 d16356573bb0c8f7a106a18c18f091cc 452 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 2 18 1.9E-19 T 26-04-2016 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 smi_0787 d16356573bb0c8f7a106a18c18f091cc 452 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 108 122 1.9E-19 T 26-04-2016 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 smi_0787 d16356573bb0c8f7a106a18c18f091cc 452 Gene3D G3DSA:3.90.120.10 381 429 1.5E-13 T 26-04-2016 smi_0787 d16356573bb0c8f7a106a18c18f091cc 452 PANTHER PTHR10629 220 451 1.4E-54 T 26-04-2016 smi_0787 d16356573bb0c8f7a106a18c18f091cc 452 PANTHER PTHR10629 1 167 1.4E-54 T 26-04-2016 smi_1558 6b62cecf47e671e93d7fc362fd3a78ea 197 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 15 197 29.56 T 26-04-2016 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0000917|GO:0005525 smi_1558 6b62cecf47e671e93d7fc362fd3a78ea 197 Gene3D G3DSA:3.40.50.300 10 195 3.9E-47 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1558 6b62cecf47e671e93d7fc362fd3a78ea 197 SUPERFAMILY SSF52540 6 196 2.07E-39 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1558 6b62cecf47e671e93d7fc362fd3a78ea 197 PRINTS PR00449 Transforming protein P21 ras signature 175 197 7.2E-5 T 26-04-2016 smi_1558 6b62cecf47e671e93d7fc362fd3a78ea 197 PRINTS PR00449 Transforming protein P21 ras signature 28 49 7.2E-5 T 26-04-2016 smi_1558 6b62cecf47e671e93d7fc362fd3a78ea 197 PRINTS PR00449 Transforming protein P21 ras signature 137 150 7.2E-5 T 26-04-2016 smi_1558 6b62cecf47e671e93d7fc362fd3a78ea 197 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 11 193 3.6E-74 T 26-04-2016 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0000917|GO:0005525 smi_1558 6b62cecf47e671e93d7fc362fd3a78ea 197 Pfam PF01926 50S ribosome-binding GTPase 29 147 2.9E-21 T 26-04-2016 IPR006073 GTP binding domain GO:0005525 smi_1558 6b62cecf47e671e93d7fc362fd3a78ea 197 PANTHER PTHR11649 8 197 2.2E-58 T 26-04-2016 smi_1311 6994ae6a5650a998f4cd80f6eb40fa7b 501 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 26 92 2.0E-15 T 26-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 smi_1311 6994ae6a5650a998f4cd80f6eb40fa7b 501 SUPERFAMILY SSF47917 372 497 6.28E-47 T 26-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 smi_1311 6994ae6a5650a998f4cd80f6eb40fa7b 501 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 3 495 2.4E-245 T 26-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 smi_1311 6994ae6a5650a998f4cd80f6eb40fa7b 501 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 371 493 1.4E-47 T 26-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 smi_1311 6994ae6a5650a998f4cd80f6eb40fa7b 501 Gene3D G3DSA:3.40.50.300 94 371 4.1E-113 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1311 6994ae6a5650a998f4cd80f6eb40fa7b 501 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 149 364 5.0E-71 T 26-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 smi_1311 6994ae6a5650a998f4cd80f6eb40fa7b 501 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 1 499 49.531 T 26-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 smi_1311 6994ae6a5650a998f4cd80f6eb40fa7b 501 PANTHER PTHR15184 1 486 2.5E-294 T 26-04-2016 smi_1311 6994ae6a5650a998f4cd80f6eb40fa7b 501 PANTHER PTHR15184:SF3 1 486 2.5E-294 T 26-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 smi_1311 6994ae6a5650a998f4cd80f6eb40fa7b 501 SUPERFAMILY SSF50615 10 94 8.63E-28 T 26-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 smi_1311 6994ae6a5650a998f4cd80f6eb40fa7b 501 Gene3D G3DSA:2.40.30.20 3 93 3.2E-34 T 26-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 smi_1311 6994ae6a5650a998f4cd80f6eb40fa7b 501 PIRSF PIRSF039088 1 501 8.4E-238 T 26-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 smi_1311 6994ae6a5650a998f4cd80f6eb40fa7b 501 Gene3D G3DSA:1.20.150.20 372 497 3.2E-51 T 26-04-2016 smi_1311 6994ae6a5650a998f4cd80f6eb40fa7b 501 SUPERFAMILY SSF52540 95 370 1.27E-97 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0341 95208382a5f483069982bcf1c293a0f1 332 Gene3D G3DSA:3.40.50.720 2 173 2.2E-51 T 26-04-2016 IPR016040 NAD(P)-binding domain smi_0341 95208382a5f483069982bcf1c293a0f1 332 Pfam PF01370 NAD dependent epimerase/dehydratase family 5 256 7.9E-57 T 26-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 smi_0341 95208382a5f483069982bcf1c293a0f1 332 PANTHER PTHR10366:SF39 4 326 8.8E-98 T 26-04-2016 smi_0341 95208382a5f483069982bcf1c293a0f1 332 Gene3D G3DSA:3.90.25.10 174 225 1.3E-38 T 26-04-2016 smi_0341 95208382a5f483069982bcf1c293a0f1 332 Gene3D G3DSA:3.90.25.10 258 325 1.3E-38 T 26-04-2016 smi_0341 95208382a5f483069982bcf1c293a0f1 332 SUPERFAMILY SSF51735 1 325 2.47E-90 T 26-04-2016 IPR016040 NAD(P)-binding domain smi_0341 95208382a5f483069982bcf1c293a0f1 332 PANTHER PTHR10366 4 326 8.8E-98 T 26-04-2016 smi_0341 95208382a5f483069982bcf1c293a0f1 332 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 5 326 4.8E-112 T 26-04-2016 IPR005886 UDP-glucose 4-epimerase GalE GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|UniPathway: UPA00214 smi_2035 8a2bc7d17a6ae3a2bdf3fa7a34b2491d 502 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 5 495 4.8E-222 T 26-04-2016 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 smi_2035 8a2bc7d17a6ae3a2bdf3fa7a34b2491d 502 PIRSF PIRSF000538 4 501 6.5E-168 T 26-04-2016 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 smi_2035 8a2bc7d17a6ae3a2bdf3fa7a34b2491d 502 SUPERFAMILY SSF53067 256 494 2.46E-77 T 26-04-2016 smi_2035 8a2bc7d17a6ae3a2bdf3fa7a34b2491d 502 Hamap MF_00186 Glycerol kinase [glpK]. 4 498 56.439 T 26-04-2016 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 smi_2035 8a2bc7d17a6ae3a2bdf3fa7a34b2491d 502 PANTHER PTHR10196:SF9 1 502 2.8E-249 T 26-04-2016 smi_2035 8a2bc7d17a6ae3a2bdf3fa7a34b2491d 502 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 363 383 - T 26-04-2016 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 smi_2035 8a2bc7d17a6ae3a2bdf3fa7a34b2491d 502 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 263 451 7.2E-55 T 26-04-2016 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 smi_2035 8a2bc7d17a6ae3a2bdf3fa7a34b2491d 502 Gene3D G3DSA:3.30.420.40 256 495 3.2E-93 T 26-04-2016 smi_2035 8a2bc7d17a6ae3a2bdf3fa7a34b2491d 502 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 7 253 1.9E-86 T 26-04-2016 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 smi_2035 8a2bc7d17a6ae3a2bdf3fa7a34b2491d 502 PANTHER PTHR10196 1 502 2.8E-249 T 26-04-2016 smi_2035 8a2bc7d17a6ae3a2bdf3fa7a34b2491d 502 SUPERFAMILY SSF53067 6 255 2.59E-94 T 26-04-2016 smi_2035 8a2bc7d17a6ae3a2bdf3fa7a34b2491d 502 Gene3D G3DSA:3.30.420.40 2 254 1.4E-105 T 26-04-2016 smi_2035 8a2bc7d17a6ae3a2bdf3fa7a34b2491d 502 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 136 148 - T 26-04-2016 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 smi_0814 e1908a7a4a850304e343c636a2100e4f 448 Gene3D G3DSA:3.40.192.10 69 189 7.5E-62 T 26-04-2016 smi_0814 e1908a7a4a850304e343c636a2100e4f 448 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 58 186 3.6E-50 T 26-04-2016 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 smi_0814 e1908a7a4a850304e343c636a2100e4f 448 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 203 446 3.1E-88 T 26-04-2016 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 smi_0814 e1908a7a4a850304e343c636a2100e4f 448 PANTHER PTHR11606 1 448 4.3E-249 T 26-04-2016 smi_0814 e1908a7a4a850304e343c636a2100e4f 448 PIRSF PIRSF000185 23 448 2.8E-124 T 26-04-2016 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 smi_0814 e1908a7a4a850304e343c636a2100e4f 448 SMART SM00839 205 446 4.0E-91 T 26-04-2016 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 smi_0814 e1908a7a4a850304e343c636a2100e4f 448 SUPERFAMILY SSF53223 7 197 5.76E-73 T 26-04-2016 smi_0814 e1908a7a4a850304e343c636a2100e4f 448 Gene3D G3DSA:1.10.285.10 6 68 2.2E-27 T 26-04-2016 smi_0814 e1908a7a4a850304e343c636a2100e4f 448 Gene3D G3DSA:1.10.285.10 373 448 6.2E-25 T 26-04-2016 smi_0814 e1908a7a4a850304e343c636a2100e4f 448 Gene3D G3DSA:3.40.50.720 210 372 1.9E-61 T 26-04-2016 IPR016040 NAD(P)-binding domain smi_0814 e1908a7a4a850304e343c636a2100e4f 448 SUPERFAMILY SSF51735 203 447 1.6E-74 T 26-04-2016 IPR016040 NAD(P)-binding domain smi_0814 e1908a7a4a850304e343c636a2100e4f 448 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 194 216 2.0E-32 T 26-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 smi_0814 e1908a7a4a850304e343c636a2100e4f 448 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 372 383 2.0E-32 T 26-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 smi_0814 e1908a7a4a850304e343c636a2100e4f 448 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 236 256 2.0E-32 T 26-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 smi_0814 e1908a7a4a850304e343c636a2100e4f 448 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 115 129 2.0E-32 T 26-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 smi_0814 e1908a7a4a850304e343c636a2100e4f 448 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 123 136 - T 26-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 smi_0814 e1908a7a4a850304e343c636a2100e4f 448 PANTHER PTHR11606:SF4 1 448 4.3E-249 T 26-04-2016 smi_1967 394736a17ae95fd5861af67ab99ebe6f 464 ProSitePatterns PS00163 Fumarate lyases signature. 279 288 - T 26-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 smi_1967 394736a17ae95fd5861af67ab99ebe6f 464 Gene3D G3DSA:1.10.275.10 5 110 5.7E-38 T 26-04-2016 IPR024083 Fumarase/histidase, N-terminal smi_1967 394736a17ae95fd5861af67ab99ebe6f 464 TIGRFAM TIGR00838 argH: argininosuccinate lyase 7 457 2.4E-191 T 26-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 smi_1967 394736a17ae95fd5861af67ab99ebe6f 464 Pfam PF14698 Argininosuccinate lyase C-terminal 367 434 5.4E-21 T 26-04-2016 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 smi_1967 394736a17ae95fd5861af67ab99ebe6f 464 PRINTS PR00145 Argininosuccinate lyase family signature 314 333 2.1E-68 T 26-04-2016 smi_1967 394736a17ae95fd5861af67ab99ebe6f 464 PRINTS PR00145 Argininosuccinate lyase family signature 197 213 2.1E-68 T 26-04-2016 smi_1967 394736a17ae95fd5861af67ab99ebe6f 464 PRINTS PR00145 Argininosuccinate lyase family signature 235 259 2.1E-68 T 26-04-2016 smi_1967 394736a17ae95fd5861af67ab99ebe6f 464 PRINTS PR00145 Argininosuccinate lyase family signature 146 166 2.1E-68 T 26-04-2016 smi_1967 394736a17ae95fd5861af67ab99ebe6f 464 PRINTS PR00145 Argininosuccinate lyase family signature 105 127 2.1E-68 T 26-04-2016 smi_1967 394736a17ae95fd5861af67ab99ebe6f 464 PRINTS PR00145 Argininosuccinate lyase family signature 279 295 2.1E-68 T 26-04-2016 smi_1967 394736a17ae95fd5861af67ab99ebe6f 464 PANTHER PTHR11444 6 459 9.0E-231 T 26-04-2016 IPR000362 Fumarate lyase family smi_1967 394736a17ae95fd5861af67ab99ebe6f 464 SUPERFAMILY SSF48557 7 457 8.95E-147 T 26-04-2016 IPR008948 L-Aspartase-like GO:0003824 smi_1967 394736a17ae95fd5861af67ab99ebe6f 464 PRINTS PR00149 Fumarate lyase superfamily signature 106 124 1.4E-27 T 26-04-2016 IPR000362 Fumarate lyase family smi_1967 394736a17ae95fd5861af67ab99ebe6f 464 PRINTS PR00149 Fumarate lyase superfamily signature 151 169 1.4E-27 T 26-04-2016 IPR000362 Fumarate lyase family smi_1967 394736a17ae95fd5861af67ab99ebe6f 464 PRINTS PR00149 Fumarate lyase superfamily signature 279 295 1.4E-27 T 26-04-2016 IPR000362 Fumarate lyase family smi_1967 394736a17ae95fd5861af67ab99ebe6f 464 PRINTS PR00149 Fumarate lyase superfamily signature 235 262 1.4E-27 T 26-04-2016 IPR000362 Fumarate lyase family smi_1967 394736a17ae95fd5861af67ab99ebe6f 464 Gene3D G3DSA:1.10.40.30 378 435 1.6E-24 T 26-04-2016 smi_1967 394736a17ae95fd5861af67ab99ebe6f 464 Hamap MF_00006 Argininosuccinate lyase [argH]. 6 457 42.515 T 26-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 smi_1967 394736a17ae95fd5861af67ab99ebe6f 464 PANTHER PTHR11444:SF3 6 459 9.0E-231 T 26-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 smi_1967 394736a17ae95fd5861af67ab99ebe6f 464 Gene3D G3DSA:1.20.200.10 111 377 2.7E-102 T 26-04-2016 smi_1967 394736a17ae95fd5861af67ab99ebe6f 464 Pfam PF00206 Lyase 10 304 2.0E-70 T 26-04-2016 IPR022761 Fumarate lyase, N-terminal smi_1941 2a165723f8123081ad71c059b8974532 230 SUPERFAMILY SSF161098 23 216 2.75E-32 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 smi_1941 2a165723f8123081ad71c059b8974532 230 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 53 228 2.2E-11 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 smi_1941 2a165723f8123081ad71c059b8974532 230 Gene3D G3DSA:1.10.3720.10 20 228 5.7E-27 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 smi_1941 2a165723f8123081ad71c059b8974532 230 PANTHER PTHR30450:SF1 25 230 4.7E-76 T 26-04-2016 smi_1941 2a165723f8123081ad71c059b8974532 230 PANTHER PTHR30450 25 230 4.7E-76 T 26-04-2016 smi_1150 e9fc60a2db98f34b500ab5dc421948e3 91 PRINTS PR01727 Prokaryotic integration host factor signature 41 56 9.6E-22 T 26-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 smi_1150 e9fc60a2db98f34b500ab5dc421948e3 91 PRINTS PR01727 Prokaryotic integration host factor signature 59 72 9.6E-22 T 26-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 smi_1150 e9fc60a2db98f34b500ab5dc421948e3 91 PRINTS PR01727 Prokaryotic integration host factor signature 75 89 9.6E-22 T 26-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 smi_1150 e9fc60a2db98f34b500ab5dc421948e3 91 Pfam PF00216 Bacterial DNA-binding protein 3 91 2.2E-34 T 26-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 smi_1150 e9fc60a2db98f34b500ab5dc421948e3 91 SUPERFAMILY SSF47729 3 91 4.42E-33 T 26-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 smi_1150 e9fc60a2db98f34b500ab5dc421948e3 91 PANTHER PTHR33175 1 91 4.3E-45 T 26-04-2016 smi_1150 e9fc60a2db98f34b500ab5dc421948e3 91 SMART SM00411 2 91 3.1E-46 T 26-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 smi_1150 e9fc60a2db98f34b500ab5dc421948e3 91 Gene3D G3DSA:4.10.520.10 3 91 2.2E-38 T 26-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 smi_1150 e9fc60a2db98f34b500ab5dc421948e3 91 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 47 66 - T 26-04-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 smi_1826 4b6639af16b3b4b8f71cc28a411971f6 555 Pfam PF13684 Dihydroxyacetone kinase family 240 555 3.4E-128 T 26-04-2016 IPR033470 Uncharacterised protein, DhaK domain smi_1826 4b6639af16b3b4b8f71cc28a411971f6 555 SMART SM01120 34 199 5.4E-69 T 26-04-2016 IPR004007 DhaL domain GO:0004371|GO:0006071 smi_1826 4b6639af16b3b4b8f71cc28a411971f6 555 Pfam PF02734 DAK2 domain 34 198 2.0E-40 T 26-04-2016 IPR004007 DhaL domain GO:0004371|GO:0006071 smi_1826 4b6639af16b3b4b8f71cc28a411971f6 555 PANTHER PTHR33434 1 555 4.3E-268 T 26-04-2016 smi_1826 4b6639af16b3b4b8f71cc28a411971f6 555 TIGRFAM TIGR03599 YloV: DAK2 domain fusion protein YloV 9 555 5.2E-216 T 26-04-2016 IPR019986 DAK2 domain-containing protein YloV smi_1826 4b6639af16b3b4b8f71cc28a411971f6 555 SUPERFAMILY SSF101473 3 200 9.02E-47 T 26-04-2016 IPR004007 DhaL domain GO:0004371|GO:0006071 smi_1826 4b6639af16b3b4b8f71cc28a411971f6 555 PANTHER PTHR33434:SF4 1 555 4.3E-268 T 26-04-2016 smi_1826 4b6639af16b3b4b8f71cc28a411971f6 555 SMART SM01121 240 555 1.9E-196 T 26-04-2016 IPR033470 Uncharacterised protein, DhaK domain smi_0936 683174674e2504cbdd6620bc54d7fb17 420 SUPERFAMILY SSF53720 6 419 7.99E-106 T 26-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 smi_0936 683174674e2504cbdd6620bc54d7fb17 420 PANTHER PTHR11063:SF8 1 420 4.2E-167 T 26-04-2016 smi_0936 683174674e2504cbdd6620bc54d7fb17 420 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 326 347 - T 26-04-2016 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 smi_0936 683174674e2504cbdd6620bc54d7fb17 420 Pfam PF00171 Aldehyde dehydrogenase family 71 276 4.5E-9 T 26-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 smi_0936 683174674e2504cbdd6620bc54d7fb17 420 Gene3D G3DSA:3.40.309.10 224 377 9.4E-39 T 26-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 smi_0936 683174674e2504cbdd6620bc54d7fb17 420 PANTHER PTHR11063 1 420 4.2E-167 T 26-04-2016 smi_0936 683174674e2504cbdd6620bc54d7fb17 420 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 3 419 39.089 T 26-04-2016 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 smi_0936 683174674e2504cbdd6620bc54d7fb17 420 Gene3D G3DSA:3.40.605.10 378 419 7.1E-95 T 26-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 smi_0936 683174674e2504cbdd6620bc54d7fb17 420 Gene3D G3DSA:3.40.605.10 4 221 7.1E-95 T 26-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 smi_0936 683174674e2504cbdd6620bc54d7fb17 420 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 17 409 7.0E-139 T 26-04-2016 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 smi_0936 683174674e2504cbdd6620bc54d7fb17 420 PIRSF PIRSF000151 1 420 1.3E-168 T 26-04-2016 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 smi_1916 012789b2fa19ef2ae2b04a84eee48559 154 Pfam PF12182 Bacterial lipoprotein 70 154 1.7E-33 T 26-04-2016 IPR020961 Domain of unknown function DUF3642, lipoprotein smi_1916 012789b2fa19ef2ae2b04a84eee48559 154 Gene3D G3DSA:2.40.128.50 68 154 2.2E-44 T 26-04-2016 IPR027279 D-aminopeptidase/lipoprotein domain smi_0152 7a2db243465c3f7fc31691fd895bd332 844 Gene3D G3DSA:3.40.50.300 555 786 4.4E-83 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0152 7a2db243465c3f7fc31691fd895bd332 844 SUPERFAMILY SSF53150 118 265 1.23E-29 T 26-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 smi_0152 7a2db243465c3f7fc31691fd895bd332 844 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 7 842 0.0 T 26-04-2016 IPR005748 DNA mismatch repair protein MutS, type 1 GO:0005524|GO:0006298|GO:0030983 smi_0152 7a2db243465c3f7fc31691fd895bd332 844 SUPERFAMILY SSF52540 555 786 2.45E-59 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0152 7a2db243465c3f7fc31691fd895bd332 844 SMART SM00534 595 782 3.6E-119 T 26-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 smi_0152 7a2db243465c3f7fc31691fd895bd332 844 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 6 836 23.999 T 26-04-2016 IPR005748 DNA mismatch repair protein MutS, type 1 GO:0005524|GO:0006298|GO:0030983 smi_0152 7a2db243465c3f7fc31691fd895bd332 844 Pfam PF00488 MutS domain V 598 785 6.1E-83 T 26-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 smi_0152 7a2db243465c3f7fc31691fd895bd332 844 Pfam PF01624 MutS domain I 8 118 3.8E-44 T 26-04-2016 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 smi_0152 7a2db243465c3f7fc31691fd895bd332 844 Pfam PF05190 MutS family domain IV 415 505 1.6E-27 T 26-04-2016 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 smi_0152 7a2db243465c3f7fc31691fd895bd332 844 Pfam PF05192 MutS domain III 256 546 1.5E-43 T 26-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 smi_0152 7a2db243465c3f7fc31691fd895bd332 844 Gene3D G3DSA:3.40.1170.10 3 118 1.5E-50 T 26-04-2016 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 smi_0152 7a2db243465c3f7fc31691fd895bd332 844 Gene3D G3DSA:3.30.420.110 125 246 2.9E-25 T 26-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 smi_0152 7a2db243465c3f7fc31691fd895bd332 844 PANTHER PTHR11361 1 822 0.0 T 26-04-2016 smi_0152 7a2db243465c3f7fc31691fd895bd332 844 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 676 692 - T 26-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 smi_0152 7a2db243465c3f7fc31691fd895bd332 844 PANTHER PTHR11361:SF86 1 822 0.0 T 26-04-2016 smi_0152 7a2db243465c3f7fc31691fd895bd332 844 SUPERFAMILY SSF48334 253 551 1.57E-88 T 26-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 smi_0152 7a2db243465c3f7fc31691fd895bd332 844 Pfam PF05188 MutS domain II 126 239 1.9E-15 T 26-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 smi_0152 7a2db243465c3f7fc31691fd895bd332 844 SMART SM00533 270 578 1.0E-114 T 26-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 smi_0152 7a2db243465c3f7fc31691fd895bd332 844 SUPERFAMILY SSF55271 4 114 5.23E-42 T 26-04-2016 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 smi_0152 7a2db243465c3f7fc31691fd895bd332 844 Gene3D G3DSA:1.10.1420.10 249 455 1.5E-54 T 26-04-2016 smi_0443 0fa248f428e4c404627062aa20c18b75 418 Pfam PF04466 Phage terminase large subunit 27 408 6.0E-74 T 26-04-2016 IPR006437 Bacteriophage terminase, large subunit GO:0006323 smi_0443 0fa248f428e4c404627062aa20c18b75 418 TIGRFAM TIGR01547 phage_term_2: phage terminase, large subunit, PBSX family 27 409 8.3E-53 T 26-04-2016 IPR006437 Bacteriophage terminase, large subunit GO:0006323 smi_0443 0fa248f428e4c404627062aa20c18b75 418 PANTHER PTHR39184 1 411 5.3E-78 T 26-04-2016 smi_0443 0fa248f428e4c404627062aa20c18b75 418 PANTHER PTHR39184:SF1 1 411 5.3E-78 T 26-04-2016 smi_1881 f9bd1cd1937241119da1694c0de45bc1 121 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 113 2.4E-51 T 26-04-2016 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_1881 f9bd1cd1937241119da1694c0de45bc1 121 PIRSF PIRSF002134 1 121 3.9E-43 T 26-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_1881 f9bd1cd1937241119da1694c0de45bc1 121 Gene3D G3DSA:1.10.8.50 1 71 1.8E-29 T 26-04-2016 smi_1881 f9bd1cd1937241119da1694c0de45bc1 121 PANTHER PTHR10871 1 121 2.1E-69 T 26-04-2016 smi_1881 f9bd1cd1937241119da1694c0de45bc1 121 SUPERFAMILY SSF46946 2 112 2.5E-44 T 26-04-2016 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 smi_1881 f9bd1cd1937241119da1694c0de45bc1 121 ProSitePatterns PS00646 Ribosomal protein S13 signature. 87 100 - T 26-04-2016 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 smi_1881 f9bd1cd1937241119da1694c0de45bc1 121 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 119 27.382 T 26-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_1881 f9bd1cd1937241119da1694c0de45bc1 121 Gene3D G3DSA:4.10.910.10 72 121 1.7E-27 T 26-04-2016 IPR027437 30s ribosomal protein S13, C-terminal smi_1881 f9bd1cd1937241119da1694c0de45bc1 121 Pfam PF00416 Ribosomal protein S13/S18 62 108 3.0E-18 T 26-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_1548 6d4315410b43b51bd0b52196469b3efd 282 Gene3D G3DSA:3.40.50.10170 1 148 1.7E-39 T 26-04-2016 smi_1548 6d4315410b43b51bd0b52196469b3efd 282 TIGRFAM TIGR00762 DegV: EDD domain protein, DegV family 4 279 2.5E-90 T 26-04-2016 IPR003797 DegV smi_1548 6d4315410b43b51bd0b52196469b3efd 282 SUPERFAMILY SSF82549 1 280 5.75E-84 T 26-04-2016 smi_1548 6d4315410b43b51bd0b52196469b3efd 282 Pfam PF02645 Uncharacterised protein, DegV family COG1307 2 280 8.8E-92 T 26-04-2016 IPR003797 DegV smi_1548 6d4315410b43b51bd0b52196469b3efd 282 PANTHER PTHR33434:SF2 1 280 3.0E-82 T 26-04-2016 smi_1548 6d4315410b43b51bd0b52196469b3efd 282 PANTHER PTHR33434 1 280 3.0E-82 T 26-04-2016 smi_1548 6d4315410b43b51bd0b52196469b3efd 282 Gene3D G3DSA:3.30.1180.10 154 279 9.4E-43 T 26-04-2016 smi_1251 e1ea615db8dacfce7d02399c35877426 1085 SUPERFAMILY SSF52540 349 429 1.54E-29 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1251 e1ea615db8dacfce7d02399c35877426 1085 Pfam PF00176 SNF2 family N-terminal domain 253 413 2.9E-9 T 26-04-2016 IPR000330 SNF2-related, N-terminal domain GO:0005524 smi_1251 e1ea615db8dacfce7d02399c35877426 1085 SMART SM00487 241 431 1.3E-8 T 26-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain smi_1251 e1ea615db8dacfce7d02399c35877426 1085 Gene3D G3DSA:3.40.50.300 245 417 1.3E-18 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1251 e1ea615db8dacfce7d02399c35877426 1085 SUPERFAMILY SSF52540 212 456 1.85E-28 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1251 e1ea615db8dacfce7d02399c35877426 1085 Pfam PF00271 Helicase conserved C-terminal domain 706 828 6.1E-12 T 26-04-2016 IPR001650 Helicase, C-terminal smi_1251 e1ea615db8dacfce7d02399c35877426 1085 SMART SM00490 721 828 2.8E-9 T 26-04-2016 IPR001650 Helicase, C-terminal smi_1251 e1ea615db8dacfce7d02399c35877426 1085 PANTHER PTHR10799:SF712 1064 1073 1.2E-95 T 26-04-2016 smi_1251 e1ea615db8dacfce7d02399c35877426 1085 PANTHER PTHR10799:SF712 173 430 1.2E-95 T 26-04-2016 smi_1251 e1ea615db8dacfce7d02399c35877426 1085 PANTHER PTHR10799:SF712 757 858 1.2E-95 T 26-04-2016 smi_1251 e1ea615db8dacfce7d02399c35877426 1085 PANTHER PTHR10799:SF712 449 501 1.2E-95 T 26-04-2016 smi_1251 e1ea615db8dacfce7d02399c35877426 1085 PANTHER PTHR10799:SF712 78 109 1.2E-95 T 26-04-2016 smi_1251 e1ea615db8dacfce7d02399c35877426 1085 PANTHER PTHR10799:SF712 641 729 1.2E-95 T 26-04-2016 smi_1251 e1ea615db8dacfce7d02399c35877426 1085 PANTHER PTHR10799 1064 1073 1.2E-95 T 26-04-2016 smi_1251 e1ea615db8dacfce7d02399c35877426 1085 PANTHER PTHR10799 173 430 1.2E-95 T 26-04-2016 smi_1251 e1ea615db8dacfce7d02399c35877426 1085 PANTHER PTHR10799 757 858 1.2E-95 T 26-04-2016 smi_1251 e1ea615db8dacfce7d02399c35877426 1085 PANTHER PTHR10799 449 501 1.2E-95 T 26-04-2016 smi_1251 e1ea615db8dacfce7d02399c35877426 1085 PANTHER PTHR10799 78 109 1.2E-95 T 26-04-2016 smi_1251 e1ea615db8dacfce7d02399c35877426 1085 PANTHER PTHR10799 641 729 1.2E-95 T 26-04-2016 smi_1251 e1ea615db8dacfce7d02399c35877426 1085 Gene3D G3DSA:3.40.50.300 683 851 2.6E-23 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1251 e1ea615db8dacfce7d02399c35877426 1085 SUPERFAMILY SSF52540 677 878 1.54E-29 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1423 016aa927991ad815b39af5e8573a65cf 390 Gene3D G3DSA:3.50.50.60 2 189 7.1E-45 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 smi_1423 016aa927991ad815b39af5e8573a65cf 390 Gene3D G3DSA:3.50.50.60 334 387 7.1E-45 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 smi_1423 016aa927991ad815b39af5e8573a65cf 390 Gene3D G3DSA:1.10.8.260 270 316 1.0E-7 T 26-04-2016 IPR023166 HI0933 insert-like domain smi_1423 016aa927991ad815b39af5e8573a65cf 390 PANTHER PTHR10617 325 388 4.8E-122 T 26-04-2016 smi_1423 016aa927991ad815b39af5e8573a65cf 390 PANTHER PTHR10617 1 292 4.8E-122 T 26-04-2016 smi_1423 016aa927991ad815b39af5e8573a65cf 390 Gene3D G3DSA:2.40.30.10 192 269 5.1E-24 T 26-04-2016 smi_1423 016aa927991ad815b39af5e8573a65cf 390 PANTHER PTHR10617:SF103 325 388 4.8E-122 T 26-04-2016 smi_1423 016aa927991ad815b39af5e8573a65cf 390 PANTHER PTHR10617:SF103 1 292 4.8E-122 T 26-04-2016 smi_1423 016aa927991ad815b39af5e8573a65cf 390 SUPERFAMILY SSF160996 193 335 1.14E-33 T 26-04-2016 smi_1423 016aa927991ad815b39af5e8573a65cf 390 SUPERFAMILY SSF51905 1 191 8.57E-46 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 smi_1423 016aa927991ad815b39af5e8573a65cf 390 SUPERFAMILY SSF51905 332 386 8.57E-46 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 smi_1423 016aa927991ad815b39af5e8573a65cf 390 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 6 387 9.7E-135 T 26-04-2016 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like smi_1423 016aa927991ad815b39af5e8573a65cf 390 Pfam PF03486 HI0933-like protein 5 387 1.6E-142 T 26-04-2016 smi_1423 016aa927991ad815b39af5e8573a65cf 390 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 158 167 8.4E-6 T 26-04-2016 smi_1423 016aa927991ad815b39af5e8573a65cf 390 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 8.4E-6 T 26-04-2016 smi_1051 ee19de4ed909f250def7c75123f9b745 329 Gene3D G3DSA:3.30.1180.20 184 329 5.4E-51 T 26-04-2016 smi_1051 ee19de4ed909f250def7c75123f9b745 329 PANTHER PTHR28629:SF2 1 329 2.9E-159 T 26-04-2016 smi_1051 ee19de4ed909f250def7c75123f9b745 329 SUPERFAMILY SSF82549 11 329 2.2E-120 T 26-04-2016 smi_1051 ee19de4ed909f250def7c75123f9b745 329 Gene3D G3DSA:3.40.50.10440 11 181 1.1E-73 T 26-04-2016 smi_1051 ee19de4ed909f250def7c75123f9b745 329 Pfam PF02733 Dak1 domain 18 328 3.0E-116 T 26-04-2016 IPR004006 DhaK domain GO:0004371|GO:0006071 smi_1051 ee19de4ed909f250def7c75123f9b745 329 TIGRFAM TIGR02363 dhaK1: dihydroxyacetone kinase, DhaK subunit 1 329 2.3E-149 T 26-04-2016 IPR012736 Dihydroxyacetone kinase DhaK, subunit 1 KEGG: 00563+2.7.-.-|UniPathway: UPA00616 smi_1051 ee19de4ed909f250def7c75123f9b745 329 PANTHER PTHR28629 1 329 2.9E-159 T 26-04-2016 smi_0294 3aff3c4d8761cae344bda9810db6ba94 188 PANTHER PTHR39156 2 183 3.5E-87 T 26-04-2016 smi_0294 3aff3c4d8761cae344bda9810db6ba94 188 TIGRFAM TIGR00334 5S_RNA_mat_M5: ribonuclease M5 4 182 2.5E-47 T 26-04-2016 IPR004466 Ribonuclease M5 GO:0043822 smi_0294 3aff3c4d8761cae344bda9810db6ba94 188 SUPERFAMILY SSF110455 3 122 2.2E-33 T 26-04-2016 smi_0294 3aff3c4d8761cae344bda9810db6ba94 188 Hamap MF_01469 Ribonuclease M5 [rnmV]. 5 185 29.914 T 26-04-2016 IPR004466 Ribonuclease M5 GO:0043822 smi_0294 3aff3c4d8761cae344bda9810db6ba94 188 Gene3D G3DSA:3.40.1360.20 3 125 3.9E-39 T 26-04-2016 smi_0294 3aff3c4d8761cae344bda9810db6ba94 188 SMART SM00493 6 79 3.0E-4 T 26-04-2016 IPR006171 Toprim domain smi_0294 3aff3c4d8761cae344bda9810db6ba94 188 Pfam PF13331 Domain of unknown function (DUF4093) 97 182 1.7E-27 T 26-04-2016 IPR025156 Ribonuclease M5, C-terminal domain smi_0294 3aff3c4d8761cae344bda9810db6ba94 188 Pfam PF01751 Toprim domain 8 75 1.5E-5 T 26-04-2016 IPR006171 Toprim domain smi_0889 b14fe12cb7b8367bad90db2612d60892 425 PIRSF PIRSF000478 1 425 5.3E-158 T 26-04-2016 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase GO:0004645|GO:0006206 smi_0889 b14fe12cb7b8367bad90db2612d60892 425 Gene3D G3DSA:3.90.1170.30 326 413 1.3E-26 T 26-04-2016 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 smi_0889 b14fe12cb7b8367bad90db2612d60892 425 SUPERFAMILY SSF47648 1 67 5.36E-23 T 26-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain smi_0889 b14fe12cb7b8367bad90db2612d60892 425 Pfam PF02885 Glycosyl transferase family, helical bundle domain 4 66 1.5E-23 T 26-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain smi_0889 b14fe12cb7b8367bad90db2612d60892 425 PANTHER PTHR10515:SF0 1 424 7.9E-202 T 26-04-2016 smi_0889 b14fe12cb7b8367bad90db2612d60892 425 SMART SM00941 338 411 1.7E-23 T 26-04-2016 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 smi_0889 b14fe12cb7b8367bad90db2612d60892 425 Gene3D G3DSA:1.20.970.10 1 67 7.2E-33 T 26-04-2016 smi_0889 b14fe12cb7b8367bad90db2612d60892 425 Gene3D G3DSA:3.40.1030.10 70 325 4.0E-114 T 26-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 smi_0889 b14fe12cb7b8367bad90db2612d60892 425 TIGRFAM TIGR02644 Y_phosphoryl: pyrimidine-nucleoside phosphorylase 4 410 4.8E-171 T 26-04-2016 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic GO:0006213|GO:0016154 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181|UniPathway: UPA00578 smi_0889 b14fe12cb7b8367bad90db2612d60892 425 Pfam PF00591 Glycosyl transferase family, a/b domain 78 301 1.4E-40 T 26-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 smi_0889 b14fe12cb7b8367bad90db2612d60892 425 ProSitePatterns PS00647 Thymidine and pyrimidine-nucleoside phosphorylases signature. 110 125 - T 26-04-2016 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site GO:0006206 smi_0889 b14fe12cb7b8367bad90db2612d60892 425 Pfam PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain 338 410 7.5E-22 T 26-04-2016 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 smi_0889 b14fe12cb7b8367bad90db2612d60892 425 SUPERFAMILY SSF52418 70 320 6.93E-89 T 26-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 smi_0889 b14fe12cb7b8367bad90db2612d60892 425 PANTHER PTHR10515 1 424 7.9E-202 T 26-04-2016 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase GO:0004645|GO:0006206 smi_0889 b14fe12cb7b8367bad90db2612d60892 425 SUPERFAMILY SSF54680 326 421 2.09E-22 T 26-04-2016 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 smi_1998 af68605dc4d6c7b4064b5717a6360553 881 PANTHER PTHR11607 623 739 0.0 T 26-04-2016 smi_1998 af68605dc4d6c7b4064b5717a6360553 881 PANTHER PTHR11607 443 594 0.0 T 26-04-2016 smi_1998 af68605dc4d6c7b4064b5717a6360553 881 PANTHER PTHR11607 6 420 0.0 T 26-04-2016 smi_1998 af68605dc4d6c7b4064b5717a6360553 881 SUPERFAMILY SSF88688 299 387 7.85E-13 T 26-04-2016 IPR028995 Glycoside hydrolase families 57/38, central domain smi_1998 af68605dc4d6c7b4064b5717a6360553 881 Gene3D G3DSA:1.20.1270.50 299 386 3.6E-9 T 26-04-2016 IPR015341 Glycoside hydrolase family 38, central domain GO:0004553|GO:0008270 smi_1998 af68605dc4d6c7b4064b5717a6360553 881 SMART SM00872 297 367 1.1E-14 T 26-04-2016 IPR015341 Glycoside hydrolase family 38, central domain GO:0004553|GO:0008270 smi_1998 af68605dc4d6c7b4064b5717a6360553 881 SUPERFAMILY SSF74650 391 593 8.16E-54 T 26-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 smi_1998 af68605dc4d6c7b4064b5717a6360553 881 SUPERFAMILY SSF74650 628 876 8.16E-54 T 26-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 smi_1998 af68605dc4d6c7b4064b5717a6360553 881 SUPERFAMILY SSF88713 3 272 3.85E-63 T 26-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 smi_1998 af68605dc4d6c7b4064b5717a6360553 881 PANTHER PTHR11607:SF26 623 739 0.0 T 26-04-2016 smi_1998 af68605dc4d6c7b4064b5717a6360553 881 PANTHER PTHR11607:SF26 443 594 0.0 T 26-04-2016 smi_1998 af68605dc4d6c7b4064b5717a6360553 881 PANTHER PTHR11607:SF26 6 420 0.0 T 26-04-2016 smi_1998 af68605dc4d6c7b4064b5717a6360553 881 Pfam PF01074 Glycosyl hydrolases family 38 N-terminal domain 6 271 4.8E-30 T 26-04-2016 IPR000602 Glycoside hydrolase family 38, N-terminal domain GO:0004559|GO:0005975 smi_1998 af68605dc4d6c7b4064b5717a6360553 881 Gene3D G3DSA:3.20.110.10 3 288 6.8E-48 T 26-04-2016 IPR027291 Glycoside hydrolase 38/57, N-terminal domain smi_1998 af68605dc4d6c7b4064b5717a6360553 881 Pfam PF09261 Alpha mannosidase middle domain 299 366 9.2E-7 T 26-04-2016 IPR015341 Glycoside hydrolase family 38, central domain GO:0004553|GO:0008270 smi_1841 3eb7791b8c2dc459129b11f9b94a26d1 351 TIGRFAM TIGR00350 lytR_cpsA_psr: cell envelope-related function transcriptional attenuator common domain 75 230 1.5E-45 T 26-04-2016 IPR004474 Cell envelope-related transcriptional attenuator domain smi_1841 3eb7791b8c2dc459129b11f9b94a26d1 351 PANTHER PTHR33392:SF5 1 329 1.6E-157 T 26-04-2016 smi_1841 3eb7791b8c2dc459129b11f9b94a26d1 351 Pfam PF03816 Cell envelope-related transcriptional attenuator domain 76 230 9.7E-47 T 26-04-2016 IPR004474 Cell envelope-related transcriptional attenuator domain smi_1841 3eb7791b8c2dc459129b11f9b94a26d1 351 PANTHER PTHR33392 1 329 1.6E-157 T 26-04-2016 smi_1563 d915ea8db140d2bc3aa4cf9d9c18a99a 536 Pfam PF01183 Glycosyl hydrolases family 25 340 526 9.7E-21 T 26-04-2016 IPR002053 Glycoside hydrolase, family 25 GO:0003796|GO:0009253|GO:0016998 smi_1563 d915ea8db140d2bc3aa4cf9d9c18a99a 536 SUPERFAMILY SSF69360 123 326 3.08E-32 T 26-04-2016 smi_1563 d915ea8db140d2bc3aa4cf9d9c18a99a 536 PANTHER PTHR33308:SF3 104 530 2.2E-125 T 26-04-2016 smi_1563 d915ea8db140d2bc3aa4cf9d9c18a99a 536 PANTHER PTHR33308 104 530 2.2E-125 T 26-04-2016 smi_1563 d915ea8db140d2bc3aa4cf9d9c18a99a 536 Gene3D G3DSA:2.10.270.10 234 304 5.6E-17 T 26-04-2016 smi_1563 d915ea8db140d2bc3aa4cf9d9c18a99a 536 Gene3D G3DSA:2.10.270.10 133 198 5.1E-12 T 26-04-2016 smi_1563 d915ea8db140d2bc3aa4cf9d9c18a99a 536 SUPERFAMILY SSF51445 337 536 3.65E-30 T 26-04-2016 IPR017853 Glycoside hydrolase superfamily smi_1563 d915ea8db140d2bc3aa4cf9d9c18a99a 536 Gene3D G3DSA:2.20.120.10 199 233 4.3E-5 T 26-04-2016 smi_1563 d915ea8db140d2bc3aa4cf9d9c18a99a 536 Gene3D G3DSA:3.20.20.80 337 536 1.1E-38 T 26-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 smi_1563 d915ea8db140d2bc3aa4cf9d9c18a99a 536 Pfam PF01473 Putative cell wall binding repeat 226 246 0.053 T 26-04-2016 IPR018337 Cell wall/choline-binding repeat smi_1563 d915ea8db140d2bc3aa4cf9d9c18a99a 536 Pfam PF01473 Putative cell wall binding repeat 250 267 7.0E-5 T 26-04-2016 IPR018337 Cell wall/choline-binding repeat smi_1563 d915ea8db140d2bc3aa4cf9d9c18a99a 536 Pfam PF01473 Putative cell wall binding repeat 165 185 0.024 T 26-04-2016 IPR018337 Cell wall/choline-binding repeat smi_1563 d915ea8db140d2bc3aa4cf9d9c18a99a 536 Pfam PF01473 Putative cell wall binding repeat 126 144 0.6 T 26-04-2016 IPR018337 Cell wall/choline-binding repeat smi_1563 d915ea8db140d2bc3aa4cf9d9c18a99a 536 Pfam PF01473 Putative cell wall binding repeat 189 206 2.3E-4 T 26-04-2016 IPR018337 Cell wall/choline-binding repeat smi_1682 0d3a1f0ee24f6647c39820df8bd7b3b7 324 TIGRFAM TIGR03151 enACPred_II: putative enoyl-[acyl-carrier-protein] reductase II 2 311 2.8E-153 T 26-04-2016 IPR017569 Enoyl-(acyl-carrier-protein) reductase II, putative smi_1682 0d3a1f0ee24f6647c39820df8bd7b3b7 324 SUPERFAMILY SSF51412 1 308 4.12E-73 T 26-04-2016 smi_1682 0d3a1f0ee24f6647c39820df8bd7b3b7 324 PANTHER PTHR32332 1 323 2.4E-137 T 26-04-2016 smi_1682 0d3a1f0ee24f6647c39820df8bd7b3b7 324 PANTHER PTHR32332:SF20 1 323 2.4E-137 T 26-04-2016 smi_1682 0d3a1f0ee24f6647c39820df8bd7b3b7 324 Gene3D G3DSA:3.20.20.70 1 299 1.4E-74 T 26-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 smi_1682 0d3a1f0ee24f6647c39820df8bd7b3b7 324 Pfam PF03060 Nitronate monooxygenase 3 303 2.7E-73 T 26-04-2016 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 smi_1020 ce3b34c5888ec9bbbd60e8996ffb6692 242 SUPERFAMILY SSF56300 4 223 1.25E-36 T 26-04-2016 IPR029052 Metallo-dependent phosphatase-like smi_1020 ce3b34c5888ec9bbbd60e8996ffb6692 242 Pfam PF00149 Calcineurin-like phosphoesterase 5 197 6.4E-15 T 26-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 smi_1020 ce3b34c5888ec9bbbd60e8996ffb6692 242 Gene3D G3DSA:3.60.21.10 4 234 8.9E-43 T 26-04-2016 IPR029052 Metallo-dependent phosphatase-like smi_1020 ce3b34c5888ec9bbbd60e8996ffb6692 242 PANTHER PTHR24032 4 79 7.9E-42 T 26-04-2016 smi_1020 ce3b34c5888ec9bbbd60e8996ffb6692 242 PANTHER PTHR24032 96 222 7.9E-42 T 26-04-2016 smi_1834 d81566733f1609538b67aac3f7648039 586 PANTHER PTHR24221:SF271 6 586 2.7E-267 T 26-04-2016 smi_1834 d81566733f1609538b67aac3f7648039 586 SUPERFAMILY SSF52540 336 579 1.22E-86 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1834 d81566733f1609538b67aac3f7648039 586 Pfam PF00005 ABC transporter 361 508 4.0E-30 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 smi_1834 d81566733f1609538b67aac3f7648039 586 PANTHER PTHR24221 6 586 2.7E-267 T 26-04-2016 smi_1834 d81566733f1609538b67aac3f7648039 586 SUPERFAMILY SSF90123 10 326 1.83E-73 T 26-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 smi_1834 d81566733f1609538b67aac3f7648039 586 SMART SM00382 369 554 3.4E-16 T 26-04-2016 IPR003593 AAA+ ATPase domain smi_1834 d81566733f1609538b67aac3f7648039 586 Gene3D G3DSA:3.40.50.300 344 571 1.3E-71 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1834 d81566733f1609538b67aac3f7648039 586 Pfam PF00664 ABC transporter transmembrane region 23 298 2.1E-52 T 26-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 smi_1834 d81566733f1609538b67aac3f7648039 586 Gene3D G3DSA:1.20.1560.10 13 325 3.0E-73 T 26-04-2016 smi_1834 d81566733f1609538b67aac3f7648039 586 ProSitePatterns PS00211 ABC transporters family signature. 480 494 - T 26-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 smi_0886 8e6c33ff5c3471f48cbb690e338d57a6 546 PIRSF PIRSF000350 1 546 5.6E-260 T 26-04-2016 smi_0886 8e6c33ff5c3471f48cbb690e338d57a6 546 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 212 230 2.3E-28 T 26-04-2016 smi_0886 8e6c33ff5c3471f48cbb690e338d57a6 546 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 87 106 2.3E-28 T 26-04-2016 smi_0886 8e6c33ff5c3471f48cbb690e338d57a6 546 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 251 269 2.3E-28 T 26-04-2016 smi_0886 8e6c33ff5c3471f48cbb690e338d57a6 546 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 338 354 2.3E-28 T 26-04-2016 smi_0886 8e6c33ff5c3471f48cbb690e338d57a6 546 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 367 389 2.3E-28 T 26-04-2016 smi_0886 8e6c33ff5c3471f48cbb690e338d57a6 546 Gene3D G3DSA:3.30.70.100 1 69 1.1E-11 T 26-04-2016 smi_0886 8e6c33ff5c3471f48cbb690e338d57a6 546 Gene3D G3DSA:3.50.50.60 84 220 6.7E-37 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 smi_0886 8e6c33ff5c3471f48cbb690e338d57a6 546 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 85 402 8.9E-70 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 smi_0886 8e6c33ff5c3471f48cbb690e338d57a6 546 PANTHER PTHR22912:SF29 71 534 2.6E-141 T 26-04-2016 smi_0886 8e6c33ff5c3471f48cbb690e338d57a6 546 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 118 133 1.8E-72 T 26-04-2016 smi_0886 8e6c33ff5c3471f48cbb690e338d57a6 546 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 339 353 1.8E-72 T 26-04-2016 smi_0886 8e6c33ff5c3471f48cbb690e338d57a6 546 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 86 108 1.8E-72 T 26-04-2016 smi_0886 8e6c33ff5c3471f48cbb690e338d57a6 546 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 382 389 1.8E-72 T 26-04-2016 smi_0886 8e6c33ff5c3471f48cbb690e338d57a6 546 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 483 498 1.8E-72 T 26-04-2016 smi_0886 8e6c33ff5c3471f48cbb690e338d57a6 546 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 215 224 1.8E-72 T 26-04-2016 smi_0886 8e6c33ff5c3471f48cbb690e338d57a6 546 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 251 276 1.8E-72 T 26-04-2016 smi_0886 8e6c33ff5c3471f48cbb690e338d57a6 546 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 505 525 1.8E-72 T 26-04-2016 smi_0886 8e6c33ff5c3471f48cbb690e338d57a6 546 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 418 439 1.8E-72 T 26-04-2016 smi_0886 8e6c33ff5c3471f48cbb690e338d57a6 546 SUPERFAMILY SSF55008 2 65 2.09E-9 T 26-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 smi_0886 8e6c33ff5c3471f48cbb690e338d57a6 546 Gene3D G3DSA:3.50.50.60 221 409 8.0E-53 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 smi_0886 8e6c33ff5c3471f48cbb690e338d57a6 546 Gene3D G3DSA:3.30.390.30 410 537 1.5E-42 T 26-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 smi_0886 8e6c33ff5c3471f48cbb690e338d57a6 546 SUPERFAMILY SSF51905 83 447 1.05E-53 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 smi_0886 8e6c33ff5c3471f48cbb690e338d57a6 546 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 119 129 - T 26-04-2016 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 smi_0886 8e6c33ff5c3471f48cbb690e338d57a6 546 TIGRFAM TIGR02053 MerA: mercury(II) reductase 85 546 5.9E-193 T 26-04-2016 IPR021179 Mercury(II) reductase GO:0016152|GO:0016491|GO:0045340|GO:0050660|GO:0050661|GO:0050787|GO:0055114 smi_0886 8e6c33ff5c3471f48cbb690e338d57a6 546 SUPERFAMILY SSF55424 418 544 1.39E-36 T 26-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 smi_0886 8e6c33ff5c3471f48cbb690e338d57a6 546 Pfam PF00403 Heavy-metal-associated domain 6 63 9.7E-8 T 26-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 smi_0886 8e6c33ff5c3471f48cbb690e338d57a6 546 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 422 529 2.8E-34 T 26-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 smi_0886 8e6c33ff5c3471f48cbb690e338d57a6 546 PANTHER PTHR22912 71 534 2.6E-141 T 26-04-2016 smi_0575 e06ad2044e671a3e23ab844df91165a1 141 Gene3D G3DSA:1.10.10.10 20 136 2.4E-24 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain smi_0575 e06ad2044e671a3e23ab844df91165a1 141 SMART SM00347 41 141 5.1E-4 T 26-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 smi_0575 e06ad2044e671a3e23ab844df91165a1 141 PANTHER PTHR33164:SF15 1 140 5.8E-65 T 26-04-2016 smi_0575 e06ad2044e671a3e23ab844df91165a1 141 PANTHER PTHR33164 1 140 5.8E-65 T 26-04-2016 smi_0575 e06ad2044e671a3e23ab844df91165a1 141 Pfam PF01047 MarR family 49 109 4.0E-9 T 26-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 smi_0575 e06ad2044e671a3e23ab844df91165a1 141 SUPERFAMILY SSF46785 17 134 3.28E-19 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain smi_1891 82c5e829aa30cd4974cedd3204dada87 132 Gene3D G3DSA:3.30.1490.10 76 132 2.8E-30 T 26-04-2016 smi_1891 82c5e829aa30cd4974cedd3204dada87 132 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 132 33.089 T 26-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 smi_1891 82c5e829aa30cd4974cedd3204dada87 132 SUPERFAMILY SSF56047 2 132 1.26E-49 T 26-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 smi_1891 82c5e829aa30cd4974cedd3204dada87 132 Pfam PF00410 Ribosomal protein S8 5 132 3.3E-53 T 26-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 smi_1891 82c5e829aa30cd4974cedd3204dada87 132 ProSitePatterns PS00053 Ribosomal protein S8 signature. 102 119 - T 26-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 smi_1891 82c5e829aa30cd4974cedd3204dada87 132 PANTHER PTHR11758 1 132 6.4E-69 T 26-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 smi_1891 82c5e829aa30cd4974cedd3204dada87 132 Gene3D G3DSA:3.30.1370.30 2 73 1.5E-30 T 26-04-2016 smi_1378 605fe7f29b733105f5a5c19ace0b1a0e 242 Gene3D G3DSA:3.30.1330.30 1 75 4.8E-23 T 26-04-2016 IPR029064 50S ribosomal protein L30e-like smi_1378 605fe7f29b733105f5a5c19ace0b1a0e 242 Gene3D G3DSA:3.40.1280.10 90 241 2.1E-52 T 26-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal smi_1378 605fe7f29b733105f5a5c19ace0b1a0e 242 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 6 79 4.5E-16 T 26-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 smi_1378 605fe7f29b733105f5a5c19ace0b1a0e 242 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 5 241 1.4E-80 T 26-04-2016 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 smi_1378 605fe7f29b733105f5a5c19ace0b1a0e 242 PANTHER PTHR12029 5 242 3.4E-82 T 26-04-2016 smi_1378 605fe7f29b733105f5a5c19ace0b1a0e 242 Pfam PF00588 SpoU rRNA Methylase family 96 235 1.4E-42 T 26-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 smi_1378 605fe7f29b733105f5a5c19ace0b1a0e 242 SUPERFAMILY SSF55315 2 76 5.35E-18 T 26-04-2016 IPR029064 50S ribosomal protein L30e-like smi_1378 605fe7f29b733105f5a5c19ace0b1a0e 242 SUPERFAMILY SSF75217 70 242 1.05E-49 T 26-04-2016 IPR029028 Alpha/beta knot methyltransferases smi_1378 605fe7f29b733105f5a5c19ace0b1a0e 242 SMART SM00967 6 80 2.1E-15 T 26-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 smi_1893 f5c168302dc666f548bf8c40fd4bfa16 180 Pfam PF00281 Ribosomal protein L5 25 81 1.9E-26 T 26-04-2016 IPR031310 Ribosomal protein L5, N-terminal smi_1893 f5c168302dc666f548bf8c40fd4bfa16 180 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 2 180 43.58 T 26-04-2016 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_1893 f5c168302dc666f548bf8c40fd4bfa16 180 SUPERFAMILY SSF55282 4 179 7.06E-74 T 26-04-2016 IPR022803 Ribosomal protein L5 domain smi_1893 f5c168302dc666f548bf8c40fd4bfa16 180 Pfam PF00673 ribosomal L5P family C-terminus 86 178 2.8E-38 T 26-04-2016 IPR031309 Ribosomal protein L5, C-terminal smi_1893 f5c168302dc666f548bf8c40fd4bfa16 180 Gene3D G3DSA:3.30.1440.10 3 179 1.0E-74 T 26-04-2016 IPR022803 Ribosomal protein L5 domain smi_1893 f5c168302dc666f548bf8c40fd4bfa16 180 PANTHER PTHR11994 1 179 1.5E-93 T 26-04-2016 smi_1893 f5c168302dc666f548bf8c40fd4bfa16 180 PIRSF PIRSF002161 1 180 1.1E-64 T 26-04-2016 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 smi_1893 f5c168302dc666f548bf8c40fd4bfa16 180 ProSitePatterns PS00358 Ribosomal protein L5 signature. 58 74 - T 26-04-2016 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_2056 eb6be23294366b9a847eab1963c1ef5f 182 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 3 102 2.4E-28 T 26-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 smi_2056 eb6be23294366b9a847eab1963c1ef5f 182 SUPERFAMILY SSF69754 3 112 2.09E-29 T 26-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 smi_2056 eb6be23294366b9a847eab1963c1ef5f 182 Gene3D G3DSA:3.30.160.100 3 95 2.7E-31 T 26-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 smi_2056 eb6be23294366b9a847eab1963c1ef5f 182 Pfam PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus 123 176 7.1E-25 T 26-04-2016 IPR032528 Sigma 54 modulation/S30EA ribosomal protein, C-terminal smi_2056 eb6be23294366b9a847eab1963c1ef5f 182 PANTHER PTHR33231 1 182 5.3E-55 T 26-04-2016 smi_2056 eb6be23294366b9a847eab1963c1ef5f 182 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 5 96 1.1E-26 T 26-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 smi_1039 34bb89bf6e9d4e6321d7e62c6c75d659 468 Gene3D G3DSA:3.20.20.80 3 465 2.5E-151 T 26-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 smi_1039 34bb89bf6e9d4e6321d7e62c6c75d659 468 TIGRFAM TIGR01233 lacG: 6-phospho-beta-galactosidase 2 468 6.1E-284 T 26-04-2016 IPR005928 6-phospho-beta-galactosidase GO:0019512|GO:0033920 KEGG: 00052+3.2.1.85|UniPathway: UPA00542 smi_1039 34bb89bf6e9d4e6321d7e62c6c75d659 468 SUPERFAMILY SSF51445 1 465 1.1E-161 T 26-04-2016 IPR017853 Glycoside hydrolase superfamily smi_1039 34bb89bf6e9d4e6321d7e62c6c75d659 468 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 9 23 - T 26-04-2016 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site smi_1039 34bb89bf6e9d4e6321d7e62c6c75d659 468 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 371 379 - T 26-04-2016 IPR018120 Glycoside hydrolase family 1, active site smi_1039 34bb89bf6e9d4e6321d7e62c6c75d659 468 PANTHER PTHR10353:SF62 286 468 0.0 T 26-04-2016 smi_1039 34bb89bf6e9d4e6321d7e62c6c75d659 468 PANTHER PTHR10353:SF62 1 263 0.0 T 26-04-2016 smi_1039 34bb89bf6e9d4e6321d7e62c6c75d659 468 Pfam PF00232 Glycosyl hydrolase family 1 2 465 7.3E-166 T 26-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 smi_1039 34bb89bf6e9d4e6321d7e62c6c75d659 468 Hamap MF_01574 6-phospho-beta-galactosidase [lacG]. 1 468 65.898 T 26-04-2016 IPR005928 6-phospho-beta-galactosidase GO:0019512|GO:0033920 KEGG: 00052+3.2.1.85|UniPathway: UPA00542 smi_1039 34bb89bf6e9d4e6321d7e62c6c75d659 468 PANTHER PTHR10353 286 468 0.0 T 26-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 smi_1039 34bb89bf6e9d4e6321d7e62c6c75d659 468 PANTHER PTHR10353 1 263 0.0 T 26-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 smi_1039 34bb89bf6e9d4e6321d7e62c6c75d659 468 PRINTS PR00131 Glycosyl hydrolase family 1 signature 391 402 3.0E-24 T 26-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 smi_1039 34bb89bf6e9d4e6321d7e62c6c75d659 468 PRINTS PR00131 Glycosyl hydrolase family 1 signature 436 448 3.0E-24 T 26-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 smi_1039 34bb89bf6e9d4e6321d7e62c6c75d659 468 PRINTS PR00131 Glycosyl hydrolase family 1 signature 412 429 3.0E-24 T 26-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 smi_1039 34bb89bf6e9d4e6321d7e62c6c75d659 468 PRINTS PR00131 Glycosyl hydrolase family 1 signature 371 379 3.0E-24 T 26-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 smi_1039 34bb89bf6e9d4e6321d7e62c6c75d659 468 PRINTS PR00131 Glycosyl hydrolase family 1 signature 290 304 3.0E-24 T 26-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 smi_0197 536ace81ee619853e90da155027db0c4 214 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 130 146 3.7E-48 T 26-04-2016 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 smi_0197 536ace81ee619853e90da155027db0c4 214 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 78 98 3.7E-48 T 26-04-2016 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 smi_0197 536ace81ee619853e90da155027db0c4 214 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 3 26 3.7E-48 T 26-04-2016 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 smi_0197 536ace81ee619853e90da155027db0c4 214 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 160 172 3.7E-48 T 26-04-2016 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 smi_0197 536ace81ee619853e90da155027db0c4 214 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 60 72 3.7E-48 T 26-04-2016 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 smi_0197 536ace81ee619853e90da155027db0c4 214 ProSitePatterns PS01333 Pyrrolidone-carboxylate peptidase glutamic acid active site. 67 83 - T 26-04-2016 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 smi_0197 536ace81ee619853e90da155027db0c4 214 PIRSF PIRSF015592 1 212 1.9E-84 T 26-04-2016 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 smi_0197 536ace81ee619853e90da155027db0c4 214 PANTHER PTHR23402 1 212 1.8E-70 T 26-04-2016 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like smi_0197 536ace81ee619853e90da155027db0c4 214 Gene3D G3DSA:3.40.630.20 1 203 7.4E-70 T 26-04-2016 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like smi_0197 536ace81ee619853e90da155027db0c4 214 SUPERFAMILY SSF53182 1 204 7.33E-72 T 26-04-2016 smi_0197 536ace81ee619853e90da155027db0c4 214 TIGRFAM TIGR00504 pyro_pdase: pyroglutamyl-peptidase I 2 211 9.3E-72 T 26-04-2016 IPR029762 Pyroglutamyl peptidase I, bacterial-type GO:0005829|GO:0006508|GO:0008234|GO:0016920 smi_0197 536ace81ee619853e90da155027db0c4 214 Hamap MF_00417 Pyrrolidone-carboxylate peptidase [pcp]. 1 199 39.361 T 26-04-2016 IPR029762 Pyroglutamyl peptidase I, bacterial-type GO:0005829|GO:0006508|GO:0008234|GO:0016920 smi_0197 536ace81ee619853e90da155027db0c4 214 PANTHER PTHR23402:SF1 1 212 1.8E-70 T 26-04-2016 smi_0197 536ace81ee619853e90da155027db0c4 214 ProSitePatterns PS01334 Pyrrolidone-carboxylate peptidase cysteine active site. 128 142 - T 26-04-2016 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 smi_0197 536ace81ee619853e90da155027db0c4 214 Pfam PF01470 Pyroglutamyl peptidase 1 200 2.2E-91 T 26-04-2016 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like smi_1016 2f74ede86881922e903aa0e32f2553af 291 PANTHER PTHR12001:SF23 4 272 1.9E-91 T 26-04-2016 smi_1016 2f74ede86881922e903aa0e32f2553af 291 PANTHER PTHR12001 4 272 1.9E-91 T 26-04-2016 IPR017446 Polyprenyl synthetase-related smi_1016 2f74ede86881922e903aa0e32f2553af 291 SUPERFAMILY SSF48576 5 267 1.51E-76 T 26-04-2016 IPR008949 Isoprenoid synthase domain smi_1016 2f74ede86881922e903aa0e32f2553af 291 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 77 93 - T 26-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 smi_1016 2f74ede86881922e903aa0e32f2553af 291 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 207 219 - T 26-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 smi_1016 2f74ede86881922e903aa0e32f2553af 291 Gene3D G3DSA:1.10.600.10 4 268 3.6E-81 T 26-04-2016 IPR008949 Isoprenoid synthase domain smi_1016 2f74ede86881922e903aa0e32f2553af 291 Pfam PF00348 Polyprenyl synthetase 26 267 7.0E-54 T 26-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 smi_1356 b2f9fe0d7589079b5c276c1b53cce3af 767 PANTHER PTHR22683 11 767 2.5E-287 T 26-04-2016 smi_1356 b2f9fe0d7589079b5c276c1b53cce3af 767 Pfam PF09397 Ftsk gamma domain 707 765 6.0E-27 T 26-04-2016 IPR018541 FtsK gamma domain smi_1356 b2f9fe0d7589079b5c276c1b53cce3af 767 Gene3D G3DSA:3.40.50.300 382 669 9.6E-80 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1356 b2f9fe0d7589079b5c276c1b53cce3af 767 SMART SM00843 704 767 1.2E-31 T 26-04-2016 IPR018541 FtsK gamma domain smi_1356 b2f9fe0d7589079b5c276c1b53cce3af 767 SUPERFAMILY SSF52540 381 675 1.9E-41 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1356 b2f9fe0d7589079b5c276c1b53cce3af 767 SUPERFAMILY SSF46785 705 766 4.08E-19 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain smi_1356 b2f9fe0d7589079b5c276c1b53cce3af 767 Pfam PF01580 FtsK/SpoIIIE family 412 603 8.5E-57 T 26-04-2016 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 smi_1356 b2f9fe0d7589079b5c276c1b53cce3af 767 SMART SM00382 442 624 5.7E-5 T 26-04-2016 IPR003593 AAA+ ATPase domain smi_1356 b2f9fe0d7589079b5c276c1b53cce3af 767 PANTHER PTHR22683:SF41 11 767 2.5E-287 T 26-04-2016 smi_1802 5bb349ca8581ca86dcb05a83f2476e48 124 SUPERFAMILY SSF55729 1 120 1.26E-21 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase smi_1802 5bb349ca8581ca86dcb05a83f2476e48 124 Gene3D G3DSA:3.40.630.30 1 120 1.2E-27 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase smi_1802 5bb349ca8581ca86dcb05a83f2476e48 124 PANTHER PTHR23091 1 124 1.2E-37 T 26-04-2016 smi_1802 5bb349ca8581ca86dcb05a83f2476e48 124 PANTHER PTHR23091:SF257 1 124 1.2E-37 T 26-04-2016 smi_1802 5bb349ca8581ca86dcb05a83f2476e48 124 Pfam PF13673 Acetyltransferase (GNAT) domain 28 118 1.2E-7 T 26-04-2016 IPR000182 GNAT domain GO:0008080 smi_0261 c3b38552c257fed55109b9635f5a6b59 137 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 136 39.277 T 26-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 smi_0261 c3b38552c257fed55109b9635f5a6b59 137 SUPERFAMILY SSF50249 2 136 1.2E-46 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold smi_0261 c3b38552c257fed55109b9635f5a6b59 137 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 137 8.9E-66 T 26-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 smi_0261 c3b38552c257fed55109b9635f5a6b59 137 Pfam PF00164 Ribosomal protein S12/S23 2 136 1.7E-37 T 26-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_0261 c3b38552c257fed55109b9635f5a6b59 137 PIRSF PIRSF002133 1 137 2.0E-46 T 26-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_0261 c3b38552c257fed55109b9635f5a6b59 137 PRINTS PR01034 Ribosomal protein S12 signature 90 107 1.9E-56 T 26-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 smi_0261 c3b38552c257fed55109b9635f5a6b59 137 PRINTS PR01034 Ribosomal protein S12 signature 123 135 1.9E-56 T 26-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 smi_0261 c3b38552c257fed55109b9635f5a6b59 137 PRINTS PR01034 Ribosomal protein S12 signature 107 123 1.9E-56 T 26-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 smi_0261 c3b38552c257fed55109b9635f5a6b59 137 PRINTS PR01034 Ribosomal protein S12 signature 71 90 1.9E-56 T 26-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 smi_0261 c3b38552c257fed55109b9635f5a6b59 137 PRINTS PR01034 Ribosomal protein S12 signature 55 70 1.9E-56 T 26-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 smi_0261 c3b38552c257fed55109b9635f5a6b59 137 PRINTS PR01034 Ribosomal protein S12 signature 40 55 1.9E-56 T 26-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 smi_0261 c3b38552c257fed55109b9635f5a6b59 137 PANTHER PTHR11652 1 129 6.6E-68 T 26-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_0261 c3b38552c257fed55109b9635f5a6b59 137 ProSitePatterns PS00055 Ribosomal protein S12 signature. 56 63 - T 26-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_0261 c3b38552c257fed55109b9635f5a6b59 137 Gene3D G3DSA:2.40.50.140 1 136 1.4E-60 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold smi_1537 7d83516b7cbd8b65450092ba6cce7378 2770 Gene3D G3DSA:3.30.379.10 1250 1392 4.7E-18 T 26-04-2016 IPR029018 Chitobiase/beta-hexosaminidase domain 2-like smi_1537 7d83516b7cbd8b65450092ba6cce7378 2770 Gene3D G3DSA:3.30.379.10 383 489 5.6E-19 T 26-04-2016 IPR029018 Chitobiase/beta-hexosaminidase domain 2-like smi_1537 7d83516b7cbd8b65450092ba6cce7378 2770 SUPERFAMILY SSF49785 1884 2005 9.22E-9 T 26-04-2016 IPR008979 Galactose-binding domain-like smi_1537 7d83516b7cbd8b65450092ba6cce7378 2770 PANTHER PTHR22600 590 856 3.5E-50 T 26-04-2016 smi_1537 7d83516b7cbd8b65450092ba6cce7378 2770 PANTHER PTHR22600 458 558 3.5E-50 T 26-04-2016 smi_1537 7d83516b7cbd8b65450092ba6cce7378 2770 Gene3D G3DSA:2.60.120.200 952 1008 5.3E-4 T 26-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain smi_1537 7d83516b7cbd8b65450092ba6cce7378 2770 SUPERFAMILY SSF49785 2288 2415 6.03E-10 T 26-04-2016 IPR008979 Galactose-binding domain-like smi_1537 7d83516b7cbd8b65450092ba6cce7378 2770 Gene3D G3DSA:2.60.120.260 2029 2142 1.2E-13 T 26-04-2016 IPR008979 Galactose-binding domain-like smi_1537 7d83516b7cbd8b65450092ba6cce7378 2770 Gene3D G3DSA:2.60.120.260 2286 2417 4.7E-19 T 26-04-2016 IPR008979 Galactose-binding domain-like smi_1537 7d83516b7cbd8b65450092ba6cce7378 2770 Gene3D G3DSA:2.60.120.260 1886 2005 3.6E-9 T 26-04-2016 IPR008979 Galactose-binding domain-like smi_1537 7d83516b7cbd8b65450092ba6cce7378 2770 Gene3D G3DSA:2.60.120.260 143 289 4.6E-20 T 26-04-2016 IPR008979 Galactose-binding domain-like smi_1537 7d83516b7cbd8b65450092ba6cce7378 2770 Gene3D G3DSA:2.60.120.260 1058 1186 9.0E-28 T 26-04-2016 IPR008979 Galactose-binding domain-like smi_1537 7d83516b7cbd8b65450092ba6cce7378 2770 PRINTS PR00738 Glycosyl hydrolase family 20 signature 469 489 1.1E-11 T 26-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 smi_1537 7d83516b7cbd8b65450092ba6cce7378 2770 PRINTS PR00738 Glycosyl hydrolase family 20 signature 656 674 1.1E-11 T 26-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 smi_1537 7d83516b7cbd8b65450092ba6cce7378 2770 PRINTS PR00738 Glycosyl hydrolase family 20 signature 816 832 1.1E-11 T 26-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 smi_1537 7d83516b7cbd8b65450092ba6cce7378 2770 PRINTS PR00738 Glycosyl hydrolase family 20 signature 607 624 1.1E-11 T 26-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 smi_1537 7d83516b7cbd8b65450092ba6cce7378 2770 PRINTS PR00738 Glycosyl hydrolase family 20 signature 528 549 1.1E-11 T 26-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 smi_1537 7d83516b7cbd8b65450092ba6cce7378 2770 SUPERFAMILY SSF140657 1729 1879 2.88E-21 T 26-04-2016 smi_1537 7d83516b7cbd8b65450092ba6cce7378 2770 SUPERFAMILY SSF55545 1254 1393 1.18E-18 T 26-04-2016 IPR029018 Chitobiase/beta-hexosaminidase domain 2-like smi_1537 7d83516b7cbd8b65450092ba6cce7378 2770 TIGRFAM TIGR01168 YSIRK_signal: gram-positive signal peptide, YSIRK family 3 40 3.1E-14 T 26-04-2016 IPR005877 YSIRK Gram-positive signal peptide GO:0016020 smi_1537 7d83516b7cbd8b65450092ba6cce7378 2770 Pfam PF00754 F5/8 type C domain 1060 1183 1.3E-15 T 26-04-2016 IPR000421 Coagulation factor 5/8 C-terminal domain smi_1537 7d83516b7cbd8b65450092ba6cce7378 2770 Pfam PF00754 F5/8 type C domain 2034 2134 6.8E-11 T 26-04-2016 IPR000421 Coagulation factor 5/8 C-terminal domain smi_1537 7d83516b7cbd8b65450092ba6cce7378 2770 Pfam PF00754 F5/8 type C domain 150 274 5.3E-11 T 26-04-2016 IPR000421 Coagulation factor 5/8 C-terminal domain smi_1537 7d83516b7cbd8b65450092ba6cce7378 2770 Pfam PF00754 F5/8 type C domain 2289 2404 7.3E-9 T 26-04-2016 IPR000421 Coagulation factor 5/8 C-terminal domain smi_1537 7d83516b7cbd8b65450092ba6cce7378 2770 Gene3D G3DSA:3.20.20.80 490 865 1.1E-72 T 26-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 smi_1537 7d83516b7cbd8b65450092ba6cce7378 2770 SUPERFAMILY SSF51445 1397 1727 1.0E-81 T 26-04-2016 IPR017853 Glycoside hydrolase superfamily smi_1537 7d83516b7cbd8b65450092ba6cce7378 2770 SUPERFAMILY SSF49785 1067 1185 3.05E-22 T 26-04-2016 IPR008979 Galactose-binding domain-like smi_1537 7d83516b7cbd8b65450092ba6cce7378 2770 Pfam PF02838 Glycosyl hydrolase family 20, domain 2 385 501 1.4E-19 T 26-04-2016 IPR015882 Beta-hexosaminidase, bacteial type, N-terminal KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 smi_1537 7d83516b7cbd8b65450092ba6cce7378 2770 Pfam PF02838 Glycosyl hydrolase family 20, domain 2 1255 1392 1.1E-23 T 26-04-2016 IPR015882 Beta-hexosaminidase, bacteial type, N-terminal KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 smi_1537 7d83516b7cbd8b65450092ba6cce7378 2770 TIGRFAM TIGR01167 LPXTG_anchor: LPXTG cell wall anchor domain 2737 2769 5.5E-5 T 26-04-2016 IPR019931 LPXTG cell wall anchor domain smi_1537 7d83516b7cbd8b65450092ba6cce7378 2770 SUPERFAMILY SSF55545 384 503 4.58E-16 T 26-04-2016 IPR029018 Chitobiase/beta-hexosaminidase domain 2-like smi_1537 7d83516b7cbd8b65450092ba6cce7378 2770 SUPERFAMILY SSF51445 505 547 3.31E-67 T 26-04-2016 IPR017853 Glycoside hydrolase superfamily smi_1537 7d83516b7cbd8b65450092ba6cce7378 2770 SUPERFAMILY SSF51445 575 862 3.31E-67 T 26-04-2016 IPR017853 Glycoside hydrolase superfamily smi_1537 7d83516b7cbd8b65450092ba6cce7378 2770 SUPERFAMILY SSF49785 2028 2142 6.1E-13 T 26-04-2016 IPR008979 Galactose-binding domain-like smi_1537 7d83516b7cbd8b65450092ba6cce7378 2770 Pfam PF00728 Glycosyl hydrolase family 20, catalytic domain 505 857 5.5E-31 T 26-04-2016 IPR015883 Glycoside hydrolase family 20, catalytic domain GO:0004553|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 smi_1537 7d83516b7cbd8b65450092ba6cce7378 2770 Pfam PF07555 beta-N-acetylglucosaminidase 1399 1697 3.2E-86 T 26-04-2016 IPR011496 Beta-N-acetylglucosaminidase MetaCyc: PWY-7437 smi_1537 7d83516b7cbd8b65450092ba6cce7378 2770 Pfam PF04650 YSIRK type signal peptide 7 32 9.6E-11 T 26-04-2016 IPR005877 YSIRK Gram-positive signal peptide GO:0016020 smi_1537 7d83516b7cbd8b65450092ba6cce7378 2770 SUPERFAMILY SSF49785 149 289 1.21E-13 T 26-04-2016 IPR008979 Galactose-binding domain-like smi_1018 de358d1db3a8647c6ebf9b43c1f4da96 143 PANTHER PTHR34471:SF1 1 143 2.7E-54 T 26-04-2016 smi_1018 de358d1db3a8647c6ebf9b43c1f4da96 143 PRINTS PR01467 Bacterial arginine repressor signature 83 96 1.0E-14 T 26-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 smi_1018 de358d1db3a8647c6ebf9b43c1f4da96 143 PRINTS PR01467 Bacterial arginine repressor signature 21 34 1.0E-14 T 26-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 smi_1018 de358d1db3a8647c6ebf9b43c1f4da96 143 PRINTS PR01467 Bacterial arginine repressor signature 113 128 1.0E-14 T 26-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 smi_1018 de358d1db3a8647c6ebf9b43c1f4da96 143 PRINTS PR01467 Bacterial arginine repressor signature 37 52 1.0E-14 T 26-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 smi_1018 de358d1db3a8647c6ebf9b43c1f4da96 143 Hamap MF_00173 Arginine repressor [argR]. 1 143 44.204 T 26-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 smi_1018 de358d1db3a8647c6ebf9b43c1f4da96 143 Gene3D G3DSA:3.30.1360.40 76 142 1.9E-11 T 26-04-2016 IPR024946 Arginine repressor C-terminal-like domain smi_1018 de358d1db3a8647c6ebf9b43c1f4da96 143 Pfam PF02863 Arginine repressor, C-terminal domain 77 141 2.8E-10 T 26-04-2016 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 UniPathway: UPA00068 smi_1018 de358d1db3a8647c6ebf9b43c1f4da96 143 SUPERFAMILY SSF46785 1 67 2.59E-20 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain smi_1018 de358d1db3a8647c6ebf9b43c1f4da96 143 PANTHER PTHR34471 1 143 2.7E-54 T 26-04-2016 smi_1018 de358d1db3a8647c6ebf9b43c1f4da96 143 SUPERFAMILY SSF55252 77 143 3.01E-13 T 26-04-2016 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 UniPathway: UPA00068 smi_1018 de358d1db3a8647c6ebf9b43c1f4da96 143 Pfam PF01316 Arginine repressor, DNA binding domain 1 66 4.6E-23 T 26-04-2016 IPR020900 Arginine repressor, DNA-binding domain GO:0003700|GO:0006355|GO:0006525 UniPathway: UPA00068 smi_1018 de358d1db3a8647c6ebf9b43c1f4da96 143 Gene3D G3DSA:1.10.10.10 9 66 3.0E-25 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain smi_1680 a19aead012a13433bd6945e6a7e4ca89 243 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 242 1.2E-62 T 26-04-2016 smi_1680 a19aead012a13433bd6945e6a7e4ca89 243 Gene3D G3DSA:3.40.50.720 1 243 1.8E-86 T 26-04-2016 IPR016040 NAD(P)-binding domain smi_1680 a19aead012a13433bd6945e6a7e4ca89 243 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 9 241 2.8E-96 T 26-04-2016 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00040+1.1.1.10|KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 smi_1680 a19aead012a13433bd6945e6a7e4ca89 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 5.8E-17 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR smi_1680 a19aead012a13433bd6945e6a7e4ca89 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 5.8E-17 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR smi_1680 a19aead012a13433bd6945e6a7e4ca89 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 5.8E-17 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR smi_1680 a19aead012a13433bd6945e6a7e4ca89 243 PANTHER PTHR24322 153 184 1.6E-62 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR smi_1680 a19aead012a13433bd6945e6a7e4ca89 243 PANTHER PTHR24322 10 137 1.6E-62 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR smi_1680 a19aead012a13433bd6945e6a7e4ca89 243 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 26-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 smi_1680 a19aead012a13433bd6945e6a7e4ca89 243 PANTHER PTHR24322:SF328 153 184 1.6E-62 T 26-04-2016 smi_1680 a19aead012a13433bd6945e6a7e4ca89 243 PANTHER PTHR24322:SF328 10 137 1.6E-62 T 26-04-2016 smi_1680 a19aead012a13433bd6945e6a7e4ca89 243 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 184 3.7E-7 T 26-04-2016 smi_1680 a19aead012a13433bd6945e6a7e4ca89 243 SUPERFAMILY SSF51735 4 243 2.07E-81 T 26-04-2016 IPR016040 NAD(P)-binding domain smi_1680 a19aead012a13433bd6945e6a7e4ca89 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 6.1E-44 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR smi_1680 a19aead012a13433bd6945e6a7e4ca89 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 6.1E-44 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR smi_1680 a19aead012a13433bd6945e6a7e4ca89 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 6.1E-44 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR smi_1680 a19aead012a13433bd6945e6a7e4ca89 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 227 6.1E-44 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR smi_1680 a19aead012a13433bd6945e6a7e4ca89 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 6.1E-44 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR smi_1680 a19aead012a13433bd6945e6a7e4ca89 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 6.1E-44 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR smi_0647 713048c0e6a13915406419696f529f42 145 SUPERFAMILY SSF46785 5 136 1.47E-29 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain smi_0647 713048c0e6a13915406419696f529f42 145 Gene3D G3DSA:1.10.10.10 1 144 1.9E-49 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain smi_0647 713048c0e6a13915406419696f529f42 145 Pfam PF02082 Transcriptional regulator 1 82 1.7E-21 T 26-04-2016 IPR000944 Transcription regulator Rrf2-type smi_0647 713048c0e6a13915406419696f529f42 145 PANTHER PTHR33221:SF5 2 145 2.1E-70 T 26-04-2016 smi_0647 713048c0e6a13915406419696f529f42 145 PANTHER PTHR33221 2 145 2.1E-70 T 26-04-2016 smi_1637 98cda4f0a3efc261c5f1fdcde6aa35e1 209 Gene3D G3DSA:3.40.50.620 21 209 1.2E-63 T 26-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold smi_1637 98cda4f0a3efc261c5f1fdcde6aa35e1 209 TIGRFAM TIGR00482 TIGR00482: nicotinate (nicotinamide) nucleotide adenylyltransferase 28 209 4.8E-53 T 26-04-2016 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: REACT_11193|UniPathway: UPA00253 smi_1637 98cda4f0a3efc261c5f1fdcde6aa35e1 209 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 24 209 28.368 T 26-04-2016 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: REACT_11193|UniPathway: UPA00253 smi_1637 98cda4f0a3efc261c5f1fdcde6aa35e1 209 SUPERFAMILY SSF52374 24 209 3.56E-52 T 26-04-2016 smi_1637 98cda4f0a3efc261c5f1fdcde6aa35e1 209 PANTHER PTHR12039 3 209 1.0E-58 T 26-04-2016 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: REACT_11193|UniPathway: UPA00253 smi_1637 98cda4f0a3efc261c5f1fdcde6aa35e1 209 Pfam PF01467 Cytidylyltransferase-like 28 183 6.6E-36 T 26-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 smi_1637 98cda4f0a3efc261c5f1fdcde6aa35e1 209 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 26 89 1.7E-8 T 26-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 smi_1285 2f2ba4767d0a837d7c62d643e3edba29 196 PANTHER PTHR30231 5 174 3.6E-30 T 26-04-2016 smi_1285 2f2ba4767d0a837d7c62d643e3edba29 196 SUPERFAMILY SSF53098 6 175 1.0E-28 T 26-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 smi_1285 2f2ba4767d0a837d7c62d643e3edba29 196 Gene3D G3DSA:3.30.420.10 5 172 1.5E-29 T 26-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 smi_1285 2f2ba4767d0a837d7c62d643e3edba29 196 Pfam PF00929 Exonuclease 8 162 2.8E-12 T 26-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III smi_1285 2f2ba4767d0a837d7c62d643e3edba29 196 SMART SM00479 6 171 1.1E-18 T 26-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III smi_1123 53c3d752b417c7091ab27d2a89088977 418 Pfam PF00464 Serine hydroxymethyltransferase 9 386 1.7E-170 T 26-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 smi_1123 53c3d752b417c7091ab27d2a89088977 418 SUPERFAMILY SSF53383 8 416 4.36E-173 T 26-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase smi_1123 53c3d752b417c7091ab27d2a89088977 418 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 222 238 - T 26-04-2016 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0004372|GO:0006544|GO:0006563|GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 smi_1123 53c3d752b417c7091ab27d2a89088977 418 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 7 417 52.206 T 26-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 smi_1123 53c3d752b417c7091ab27d2a89088977 418 PIRSF PIRSF000412 1 418 4.9E-164 T 26-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 smi_1123 53c3d752b417c7091ab27d2a89088977 418 Gene3D G3DSA:3.90.1150.10 285 417 3.0E-48 T 26-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 smi_1123 53c3d752b417c7091ab27d2a89088977 418 Gene3D G3DSA:3.40.640.10 37 284 9.8E-107 T 26-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 smi_1123 53c3d752b417c7091ab27d2a89088977 418 PANTHER PTHR11680 9 416 4.6E-240 T 26-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 smi_1498 7bbe6faae3e00f6ff4e5bb4eb7881ca2 150 Gene3D G3DSA:1.10.287.180 4 77 4.1E-30 T 26-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 smi_1498 7bbe6faae3e00f6ff4e5bb4eb7881ca2 150 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 7 136 6.3E-47 T 26-04-2016 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 smi_1498 7bbe6faae3e00f6ff4e5bb4eb7881ca2 150 SUPERFAMILY SSF46557 5 79 7.85E-25 T 26-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 smi_1498 7bbe6faae3e00f6ff4e5bb4eb7881ca2 150 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 19 50 - T 26-04-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 smi_1498 7bbe6faae3e00f6ff4e5bb4eb7881ca2 150 Hamap MF_00105 Transcription elongation factor GreA [greA]. 4 150 25.906 T 26-04-2016 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 smi_1498 7bbe6faae3e00f6ff4e5bb4eb7881ca2 150 Gene3D G3DSA:3.10.50.30 79 135 4.1E-17 T 26-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 smi_1498 7bbe6faae3e00f6ff4e5bb4eb7881ca2 150 PANTHER PTHR30437 1 132 3.0E-49 T 26-04-2016 smi_1498 7bbe6faae3e00f6ff4e5bb4eb7881ca2 150 SUPERFAMILY SSF54534 83 135 4.19E-11 T 26-04-2016 smi_1498 7bbe6faae3e00f6ff4e5bb4eb7881ca2 150 PIRSF PIRSF006092 1 139 2.6E-37 T 26-04-2016 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 smi_1498 7bbe6faae3e00f6ff4e5bb4eb7881ca2 150 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 84 135 2.3E-15 T 26-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 smi_1498 7bbe6faae3e00f6ff4e5bb4eb7881ca2 150 Pfam PF03449 Transcription elongation factor, N-terminal 7 76 2.4E-27 T 26-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 smi_0226 1b5540a83971e8ced4019c052a3952af 363 Pfam PF13483 Beta-lactamase superfamily domain 42 290 1.0E-11 T 26-04-2016 smi_0226 1b5540a83971e8ced4019c052a3952af 363 Gene3D G3DSA:3.60.15.10 2 345 1.5E-119 T 26-04-2016 IPR001279 Metallo-beta-lactamase smi_0226 1b5540a83971e8ced4019c052a3952af 363 SUPERFAMILY SSF56281 35 312 5.04E-24 T 26-04-2016 IPR001279 Metallo-beta-lactamase smi_0226 1b5540a83971e8ced4019c052a3952af 363 PANTHER PTHR15032:SF13 6 77 6.7E-139 T 26-04-2016 smi_0226 1b5540a83971e8ced4019c052a3952af 363 PANTHER PTHR15032:SF13 94 363 6.7E-139 T 26-04-2016 smi_0226 1b5540a83971e8ced4019c052a3952af 363 PANTHER PTHR15032 6 77 6.7E-139 T 26-04-2016 smi_0226 1b5540a83971e8ced4019c052a3952af 363 PANTHER PTHR15032 94 363 6.7E-139 T 26-04-2016 smi_1539 80ef5ce3c67181b2bc28ea0c42fe993a 242 Hamap MF_00652 UPF0246 protein YaaA [yaaA]. 1 241 30.256 T 26-04-2016 IPR005583 Peroxide stress protein YaaA smi_1539 80ef5ce3c67181b2bc28ea0c42fe993a 242 PANTHER PTHR30283:SF3 2 242 7.4E-86 T 26-04-2016 smi_1539 80ef5ce3c67181b2bc28ea0c42fe993a 242 PANTHER PTHR30283 2 242 7.4E-86 T 26-04-2016 smi_1539 80ef5ce3c67181b2bc28ea0c42fe993a 242 Pfam PF03883 Protein of unknown function (DUF328) 1 229 5.8E-54 T 26-04-2016 IPR005583 Peroxide stress protein YaaA smi_0240 595a290009ef742fba185e215c10cb39 388 Pfam PF13936 Helix-turn-helix domain 4 47 1.4E-16 T 26-04-2016 IPR025246 Transposase IS30-like HTH domain smi_0240 595a290009ef742fba185e215c10cb39 388 PANTHER PTHR10948 1 372 3.9E-15 T 26-04-2016 smi_0240 595a290009ef742fba185e215c10cb39 388 SUPERFAMILY SSF53098 207 358 4.25E-9 T 26-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 smi_0240 595a290009ef742fba185e215c10cb39 388 Gene3D G3DSA:3.30.420.10 209 358 1.6E-5 T 26-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 smi_0619 595a290009ef742fba185e215c10cb39 388 Pfam PF13936 Helix-turn-helix domain 4 47 1.4E-16 T 26-04-2016 IPR025246 Transposase IS30-like HTH domain smi_0619 595a290009ef742fba185e215c10cb39 388 PANTHER PTHR10948 1 372 3.9E-15 T 26-04-2016 smi_0619 595a290009ef742fba185e215c10cb39 388 SUPERFAMILY SSF53098 207 358 4.25E-9 T 26-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 smi_0619 595a290009ef742fba185e215c10cb39 388 Gene3D G3DSA:3.30.420.10 209 358 1.6E-5 T 26-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 smi_1524 595a290009ef742fba185e215c10cb39 388 Pfam PF13936 Helix-turn-helix domain 4 47 1.4E-16 T 26-04-2016 IPR025246 Transposase IS30-like HTH domain smi_1524 595a290009ef742fba185e215c10cb39 388 PANTHER PTHR10948 1 372 3.9E-15 T 26-04-2016 smi_1524 595a290009ef742fba185e215c10cb39 388 SUPERFAMILY SSF53098 207 358 4.25E-9 T 26-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 smi_1524 595a290009ef742fba185e215c10cb39 388 Gene3D G3DSA:3.30.420.10 209 358 1.6E-5 T 26-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 smi_1068 595a290009ef742fba185e215c10cb39 388 Pfam PF13936 Helix-turn-helix domain 4 47 1.4E-16 T 26-04-2016 IPR025246 Transposase IS30-like HTH domain smi_1068 595a290009ef742fba185e215c10cb39 388 PANTHER PTHR10948 1 372 3.9E-15 T 26-04-2016 smi_1068 595a290009ef742fba185e215c10cb39 388 SUPERFAMILY SSF53098 207 358 4.25E-9 T 26-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 smi_1068 595a290009ef742fba185e215c10cb39 388 Gene3D G3DSA:3.30.420.10 209 358 1.6E-5 T 26-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 smi_0014 595a290009ef742fba185e215c10cb39 388 Pfam PF13936 Helix-turn-helix domain 4 47 1.4E-16 T 26-04-2016 IPR025246 Transposase IS30-like HTH domain smi_0014 595a290009ef742fba185e215c10cb39 388 PANTHER PTHR10948 1 372 3.9E-15 T 26-04-2016 smi_0014 595a290009ef742fba185e215c10cb39 388 SUPERFAMILY SSF53098 207 358 4.25E-9 T 26-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 smi_0014 595a290009ef742fba185e215c10cb39 388 Gene3D G3DSA:3.30.420.10 209 358 1.6E-5 T 26-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 smi_0987 595a290009ef742fba185e215c10cb39 388 Pfam PF13936 Helix-turn-helix domain 4 47 1.4E-16 T 26-04-2016 IPR025246 Transposase IS30-like HTH domain smi_0987 595a290009ef742fba185e215c10cb39 388 PANTHER PTHR10948 1 372 3.9E-15 T 26-04-2016 smi_0987 595a290009ef742fba185e215c10cb39 388 SUPERFAMILY SSF53098 207 358 4.25E-9 T 26-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 smi_0987 595a290009ef742fba185e215c10cb39 388 Gene3D G3DSA:3.30.420.10 209 358 1.6E-5 T 26-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 smi_1964 595a290009ef742fba185e215c10cb39 388 Pfam PF13936 Helix-turn-helix domain 4 47 1.4E-16 T 26-04-2016 IPR025246 Transposase IS30-like HTH domain smi_1964 595a290009ef742fba185e215c10cb39 388 PANTHER PTHR10948 1 372 3.9E-15 T 26-04-2016 smi_1964 595a290009ef742fba185e215c10cb39 388 SUPERFAMILY SSF53098 207 358 4.25E-9 T 26-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 smi_1964 595a290009ef742fba185e215c10cb39 388 Gene3D G3DSA:3.30.420.10 209 358 1.6E-5 T 26-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 smi_0618 595a290009ef742fba185e215c10cb39 388 Pfam PF13936 Helix-turn-helix domain 4 47 1.4E-16 T 26-04-2016 IPR025246 Transposase IS30-like HTH domain smi_0618 595a290009ef742fba185e215c10cb39 388 PANTHER PTHR10948 1 372 3.9E-15 T 26-04-2016 smi_0618 595a290009ef742fba185e215c10cb39 388 SUPERFAMILY SSF53098 207 358 4.25E-9 T 26-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 smi_0618 595a290009ef742fba185e215c10cb39 388 Gene3D G3DSA:3.30.420.10 209 358 1.6E-5 T 26-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 smi_0260 595a290009ef742fba185e215c10cb39 388 Pfam PF13936 Helix-turn-helix domain 4 47 1.4E-16 T 26-04-2016 IPR025246 Transposase IS30-like HTH domain smi_0260 595a290009ef742fba185e215c10cb39 388 PANTHER PTHR10948 1 372 3.9E-15 T 26-04-2016 smi_0260 595a290009ef742fba185e215c10cb39 388 SUPERFAMILY SSF53098 207 358 4.25E-9 T 26-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 smi_0260 595a290009ef742fba185e215c10cb39 388 Gene3D G3DSA:3.30.420.10 209 358 1.6E-5 T 26-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 smi_1405 595a290009ef742fba185e215c10cb39 388 Pfam PF13936 Helix-turn-helix domain 4 47 1.4E-16 T 26-04-2016 IPR025246 Transposase IS30-like HTH domain smi_1405 595a290009ef742fba185e215c10cb39 388 PANTHER PTHR10948 1 372 3.9E-15 T 26-04-2016 smi_1405 595a290009ef742fba185e215c10cb39 388 SUPERFAMILY SSF53098 207 358 4.25E-9 T 26-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 smi_1405 595a290009ef742fba185e215c10cb39 388 Gene3D G3DSA:3.30.420.10 209 358 1.6E-5 T 26-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 smi_1856 595a290009ef742fba185e215c10cb39 388 Pfam PF13936 Helix-turn-helix domain 4 47 1.4E-16 T 26-04-2016 IPR025246 Transposase IS30-like HTH domain smi_1856 595a290009ef742fba185e215c10cb39 388 PANTHER PTHR10948 1 372 3.9E-15 T 26-04-2016 smi_1856 595a290009ef742fba185e215c10cb39 388 SUPERFAMILY SSF53098 207 358 4.25E-9 T 26-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 smi_1856 595a290009ef742fba185e215c10cb39 388 Gene3D G3DSA:3.30.420.10 209 358 1.6E-5 T 26-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 smi_0235 595a290009ef742fba185e215c10cb39 388 Pfam PF13936 Helix-turn-helix domain 4 47 1.4E-16 T 26-04-2016 IPR025246 Transposase IS30-like HTH domain smi_0235 595a290009ef742fba185e215c10cb39 388 PANTHER PTHR10948 1 372 3.9E-15 T 26-04-2016 smi_0235 595a290009ef742fba185e215c10cb39 388 SUPERFAMILY SSF53098 207 358 4.25E-9 T 26-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 smi_0235 595a290009ef742fba185e215c10cb39 388 Gene3D G3DSA:3.30.420.10 209 358 1.6E-5 T 26-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 smi_1907 595a290009ef742fba185e215c10cb39 388 Pfam PF13936 Helix-turn-helix domain 4 47 1.4E-16 T 26-04-2016 IPR025246 Transposase IS30-like HTH domain smi_1907 595a290009ef742fba185e215c10cb39 388 PANTHER PTHR10948 1 372 3.9E-15 T 26-04-2016 smi_1907 595a290009ef742fba185e215c10cb39 388 SUPERFAMILY SSF53098 207 358 4.25E-9 T 26-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 smi_1907 595a290009ef742fba185e215c10cb39 388 Gene3D G3DSA:3.30.420.10 209 358 1.6E-5 T 26-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 smi_0512 595a290009ef742fba185e215c10cb39 388 Pfam PF13936 Helix-turn-helix domain 4 47 1.4E-16 T 26-04-2016 IPR025246 Transposase IS30-like HTH domain smi_0512 595a290009ef742fba185e215c10cb39 388 PANTHER PTHR10948 1 372 3.9E-15 T 26-04-2016 smi_0512 595a290009ef742fba185e215c10cb39 388 SUPERFAMILY SSF53098 207 358 4.25E-9 T 26-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 smi_0512 595a290009ef742fba185e215c10cb39 388 Gene3D G3DSA:3.30.420.10 209 358 1.6E-5 T 26-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 smi_0963 595a290009ef742fba185e215c10cb39 388 Pfam PF13936 Helix-turn-helix domain 4 47 1.4E-16 T 26-04-2016 IPR025246 Transposase IS30-like HTH domain smi_0963 595a290009ef742fba185e215c10cb39 388 PANTHER PTHR10948 1 372 3.9E-15 T 26-04-2016 smi_0963 595a290009ef742fba185e215c10cb39 388 SUPERFAMILY SSF53098 207 358 4.25E-9 T 26-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 smi_0963 595a290009ef742fba185e215c10cb39 388 Gene3D G3DSA:3.30.420.10 209 358 1.6E-5 T 26-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 smi_1419 595a290009ef742fba185e215c10cb39 388 Pfam PF13936 Helix-turn-helix domain 4 47 1.4E-16 T 26-04-2016 IPR025246 Transposase IS30-like HTH domain smi_1419 595a290009ef742fba185e215c10cb39 388 PANTHER PTHR10948 1 372 3.9E-15 T 26-04-2016 smi_1419 595a290009ef742fba185e215c10cb39 388 SUPERFAMILY SSF53098 207 358 4.25E-9 T 26-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 smi_1419 595a290009ef742fba185e215c10cb39 388 Gene3D G3DSA:3.30.420.10 209 358 1.6E-5 T 26-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 smi_0201 595a290009ef742fba185e215c10cb39 388 Pfam PF13936 Helix-turn-helix domain 4 47 1.4E-16 T 26-04-2016 IPR025246 Transposase IS30-like HTH domain smi_0201 595a290009ef742fba185e215c10cb39 388 PANTHER PTHR10948 1 372 3.9E-15 T 26-04-2016 smi_0201 595a290009ef742fba185e215c10cb39 388 SUPERFAMILY SSF53098 207 358 4.25E-9 T 26-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 smi_0201 595a290009ef742fba185e215c10cb39 388 Gene3D G3DSA:3.30.420.10 209 358 1.6E-5 T 26-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 smi_0873 74d385dc06b7e28ba5ccf9d417286d16 227 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 4 218 4.3E-83 T 26-04-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 smi_0873 74d385dc06b7e28ba5ccf9d417286d16 227 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 50 217 1.4E-58 T 26-04-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 smi_0873 74d385dc06b7e28ba5ccf9d417286d16 227 SUPERFAMILY SSF100950 2 175 8.66E-44 T 26-04-2016 smi_0873 74d385dc06b7e28ba5ccf9d417286d16 227 SUPERFAMILY SSF75445 127 203 6.28E-21 T 26-04-2016 smi_0873 74d385dc06b7e28ba5ccf9d417286d16 227 PANTHER PTHR11934 1 227 7.0E-92 T 26-04-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 smi_0873 74d385dc06b7e28ba5ccf9d417286d16 227 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 1 221 33.658 T 26-04-2016 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 smi_0873 74d385dc06b7e28ba5ccf9d417286d16 227 Gene3D G3DSA:3.30.70.260 141 201 1.3E-24 T 26-04-2016 smi_0873 74d385dc06b7e28ba5ccf9d417286d16 227 Gene3D G3DSA:3.40.50.1360 2 140 7.9E-59 T 26-04-2016 smi_0629 28c6976624efb17456e51ee6f1e5fc61 230 Hamap MF_01039 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [gpmA]. 1 228 42.827 T 26-04-2016 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484|UniPathway: UPA00109 smi_0629 28c6976624efb17456e51ee6f1e5fc61 230 SMART SM00855 3 189 1.5E-23 T 26-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 smi_0629 28c6976624efb17456e51ee6f1e5fc61 230 PANTHER PTHR11931 1 229 9.3E-142 T 26-04-2016 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484|UniPathway: UPA00109 smi_0629 28c6976624efb17456e51ee6f1e5fc61 230 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 128 1.1E-28 T 26-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 smi_0629 28c6976624efb17456e51ee6f1e5fc61 230 TIGRFAM TIGR01258 pgm_1: phosphoglycerate mutase 1 family 3 229 5.3E-107 T 26-04-2016 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484|UniPathway: UPA00109 smi_0629 28c6976624efb17456e51ee6f1e5fc61 230 Gene3D G3DSA:3.40.50.1240 1 227 3.4E-91 T 26-04-2016 IPR029033 Histidine phosphatase superfamily smi_0629 28c6976624efb17456e51ee6f1e5fc61 230 SUPERFAMILY SSF53254 1 229 5.39E-72 T 26-04-2016 IPR029033 Histidine phosphatase superfamily smi_1846 e5b9232c8141cd282417f648e68126ad 1216 SUPERFAMILY SSF64484 1 1174 0.0 T 26-04-2016 smi_1846 e5b9232c8141cd282417f648e68126ad 1216 Gene3D G3DSA:2.40.40.20 330 357 4.9E-38 T 26-04-2016 smi_1846 e5b9232c8141cd282417f648e68126ad 1216 Gene3D G3DSA:2.40.40.20 398 468 4.9E-38 T 26-04-2016 smi_1846 e5b9232c8141cd282417f648e68126ad 1216 PANTHER PTHR19376:SF32 1 532 0.0 T 26-04-2016 smi_1846 e5b9232c8141cd282417f648e68126ad 1216 PANTHER PTHR19376:SF32 1110 1170 0.0 T 26-04-2016 smi_1846 e5b9232c8141cd282417f648e68126ad 1216 PANTHER PTHR19376:SF32 549 1069 0.0 T 26-04-2016 smi_1846 e5b9232c8141cd282417f648e68126ad 1216 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 1 1174 0.0 T 26-04-2016 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 smi_1846 e5b9232c8141cd282417f648e68126ad 1216 Gene3D G3DSA:2.40.50.100 963 1019 8.7E-7 T 26-04-2016 smi_1846 e5b9232c8141cd282417f648e68126ad 1216 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 1 1183 10.169 T 26-04-2016 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 smi_1846 e5b9232c8141cd282417f648e68126ad 1216 Pfam PF04983 RNA polymerase Rpb1, domain 3 470 654 5.4E-33 T 26-04-2016 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 smi_1846 e5b9232c8141cd282417f648e68126ad 1216 Pfam PF05000 RNA polymerase Rpb1, domain 4 683 750 9.9E-14 T 26-04-2016 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 smi_1846 e5b9232c8141cd282417f648e68126ad 1216 SMART SM00663 216 495 1.8E-175 T 26-04-2016 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 smi_1846 e5b9232c8141cd282417f648e68126ad 1216 PANTHER PTHR19376 1 532 0.0 T 26-04-2016 smi_1846 e5b9232c8141cd282417f648e68126ad 1216 PANTHER PTHR19376 1110 1170 0.0 T 26-04-2016 smi_1846 e5b9232c8141cd282417f648e68126ad 1216 PANTHER PTHR19376 549 1069 0.0 T 26-04-2016 smi_1846 e5b9232c8141cd282417f648e68126ad 1216 Pfam PF04997 RNA polymerase Rpb1, domain 1 2 323 3.6E-85 T 26-04-2016 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 smi_1846 e5b9232c8141cd282417f648e68126ad 1216 Pfam PF04998 RNA polymerase Rpb1, domain 5 761 1122 9.6E-63 T 26-04-2016 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 smi_1846 e5b9232c8141cd282417f648e68126ad 1216 Pfam PF00623 RNA polymerase Rpb1, domain 2 325 466 9.2E-38 T 26-04-2016 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 smi_1736 e936814ae9a8ae86f803dffa0118cd1c 293 PANTHER PTHR10954:SF12 12 293 1.5E-102 T 26-04-2016 smi_1736 e936814ae9a8ae86f803dffa0118cd1c 293 Pfam PF01351 Ribonuclease HII 81 284 2.2E-62 T 26-04-2016 IPR024567 Ribonuclease HII/HIII domain smi_1736 e936814ae9a8ae86f803dffa0118cd1c 293 PIRSF PIRSF037748 1 292 1.3E-105 T 26-04-2016 IPR004641 Ribonuclease HIII GO:0004523|GO:0005737|GO:0016070 smi_1736 e936814ae9a8ae86f803dffa0118cd1c 293 Hamap MF_00053 Ribonuclease HIII [rnhC]. 1 291 37.134 T 26-04-2016 IPR004641 Ribonuclease HIII GO:0004523|GO:0005737|GO:0016070 smi_1736 e936814ae9a8ae86f803dffa0118cd1c 293 PANTHER PTHR10954 12 293 1.5E-102 T 26-04-2016 IPR001352 Ribonuclease HII/HIII GO:0003723|GO:0004523 smi_1736 e936814ae9a8ae86f803dffa0118cd1c 293 TIGRFAM TIGR00716 rnhC: ribonuclease HIII 7 283 4.5E-52 T 26-04-2016 IPR004641 Ribonuclease HIII GO:0004523|GO:0005737|GO:0016070 smi_1736 e936814ae9a8ae86f803dffa0118cd1c 293 Gene3D G3DSA:3.30.420.10 80 241 6.0E-36 T 26-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 smi_1736 e936814ae9a8ae86f803dffa0118cd1c 293 Pfam PF11858 Domain of unknown function (DUF3378) 4 73 1.4E-18 T 26-04-2016 IPR024568 Ribonuclease HIII, N-terminal smi_1736 e936814ae9a8ae86f803dffa0118cd1c 293 SUPERFAMILY SSF53098 79 290 1.67E-48 T 26-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 smi_1170 8449ba4996ead962c1e9f1552036c9b2 392 SUPERFAMILY SSF103473 17 386 2.49E-33 T 26-04-2016 IPR020846 Major facilitator superfamily domain smi_1170 8449ba4996ead962c1e9f1552036c9b2 392 Gene3D G3DSA:1.20.1250.20 13 188 5.6E-19 T 26-04-2016 smi_1170 8449ba4996ead962c1e9f1552036c9b2 392 PANTHER PTHR23513 17 385 3.9E-51 T 26-04-2016 smi_1170 8449ba4996ead962c1e9f1552036c9b2 392 Pfam PF07690 Major Facilitator Superfamily 38 343 3.2E-26 T 26-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 smi_1170 8449ba4996ead962c1e9f1552036c9b2 392 PANTHER PTHR23513:SF11 17 385 3.9E-51 T 26-04-2016 smi_1375 d4626f034b8862a25125a429770019f1 275 PANTHER PTHR10000:SF27 1 273 4.8E-122 T 26-04-2016 smi_1375 d4626f034b8862a25125a429770019f1 275 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 267 1.4E-54 T 26-04-2016 IPR023214 HAD-like domain smi_1375 d4626f034b8862a25125a429770019f1 275 PANTHER PTHR10000 1 273 4.8E-122 T 26-04-2016 smi_1375 d4626f034b8862a25125a429770019f1 275 Gene3D G3DSA:3.30.1240.10 83 186 4.9E-23 T 26-04-2016 smi_1375 d4626f034b8862a25125a429770019f1 275 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 267 2.2E-49 T 26-04-2016 IPR000150 Cof protein GO:0016787 smi_1375 d4626f034b8862a25125a429770019f1 275 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 240 8.3E-26 T 26-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 smi_1375 d4626f034b8862a25125a429770019f1 275 Gene3D G3DSA:3.40.50.1000 187 272 6.4E-51 T 26-04-2016 IPR023214 HAD-like domain smi_1375 d4626f034b8862a25125a429770019f1 275 Gene3D G3DSA:3.40.50.1000 1 74 6.4E-51 T 26-04-2016 IPR023214 HAD-like domain smi_1375 d4626f034b8862a25125a429770019f1 275 SUPERFAMILY SSF56784 1 271 1.54E-60 T 26-04-2016 IPR023214 HAD-like domain smi_0571 0c2408d7dc3077a9718bdb2ce8c1b584 147 PANTHER PTHR12589:SF5 14 147 2.5E-42 T 26-04-2016 smi_0571 0c2408d7dc3077a9718bdb2ce8c1b584 147 Gene3D G3DSA:3.30.479.10 22 144 3.7E-42 T 26-04-2016 smi_0571 0c2408d7dc3077a9718bdb2ce8c1b584 147 TIGRFAM TIGR03367 queuosine_QueD: queuosine biosynthesis protein QueD 25 114 1.9E-30 T 26-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein smi_0571 0c2408d7dc3077a9718bdb2ce8c1b584 147 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 25 143 3.8E-37 T 26-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein smi_0571 0c2408d7dc3077a9718bdb2ce8c1b584 147 PANTHER PTHR12589 14 147 2.5E-42 T 26-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein smi_0571 0c2408d7dc3077a9718bdb2ce8c1b584 147 SUPERFAMILY SSF55620 22 143 2.0E-40 T 26-04-2016 smi_0571 0c2408d7dc3077a9718bdb2ce8c1b584 147 PIRSF PIRSF006113 20 143 1.4E-27 T 26-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein smi_2016 50d4cb7c78f21fb4289938ca914b1d95 488 PANTHER PTHR30595:SF6 1 487 1.4E-34 T 26-04-2016 smi_2016 50d4cb7c78f21fb4289938ca914b1d95 488 Pfam PF04326 Putative DNA-binding domain 17 138 3.1E-15 T 26-04-2016 IPR007421 Schlafen, AAA domain GO:0005524 smi_2016 50d4cb7c78f21fb4289938ca914b1d95 488 PANTHER PTHR30595 1 487 1.4E-34 T 26-04-2016 smi_2016 50d4cb7c78f21fb4289938ca914b1d95 488 Pfam PF13749 Putative ATP-dependent DNA helicase recG C-terminal 316 400 2.8E-16 T 26-04-2016 IPR025831 ATP-dependent DNA helicase RecG, C-terminal domain smi_1733 79d1b078c33752ed29f4ce9557bf13c5 778 SMART SM00533 9 310 7.1E-6 T 26-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 smi_1733 79d1b078c33752ed29f4ce9557bf13c5 778 SUPERFAMILY SSF52540 287 507 7.03E-41 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1733 79d1b078c33752ed29f4ce9557bf13c5 778 Pfam PF00488 MutS domain V 324 506 1.3E-33 T 26-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 smi_1733 79d1b078c33752ed29f4ce9557bf13c5 778 PANTHER PTHR11361:SF14 22 593 6.3E-245 T 26-04-2016 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 smi_1733 79d1b078c33752ed29f4ce9557bf13c5 778 Gene3D G3DSA:3.40.50.300 287 507 1.7E-59 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1733 79d1b078c33752ed29f4ce9557bf13c5 778 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 403 419 - T 26-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 smi_1733 79d1b078c33752ed29f4ce9557bf13c5 778 SUPERFAMILY SSF160443 700 776 3.92E-10 T 26-04-2016 IPR002625 Smr domain smi_1733 79d1b078c33752ed29f4ce9557bf13c5 778 SMART SM00534 321 506 3.6E-65 T 26-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 smi_1733 79d1b078c33752ed29f4ce9557bf13c5 778 SMART SM00463 699 777 3.5E-19 T 26-04-2016 IPR002625 Smr domain smi_1733 79d1b078c33752ed29f4ce9557bf13c5 778 TIGRFAM TIGR01069 mutS2: MutS2 family protein 1 776 4.5E-205 T 26-04-2016 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 smi_1733 79d1b078c33752ed29f4ce9557bf13c5 778 PANTHER PTHR11361 22 593 6.3E-245 T 26-04-2016 smi_1733 79d1b078c33752ed29f4ce9557bf13c5 778 PIRSF PIRSF005814 1 777 3.5E-262 T 26-04-2016 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 smi_1733 79d1b078c33752ed29f4ce9557bf13c5 778 Pfam PF01713 Smr domain 702 777 2.0E-20 T 26-04-2016 IPR002625 Smr domain smi_1733 79d1b078c33752ed29f4ce9557bf13c5 778 SUPERFAMILY SSF48334 23 277 1.83E-24 T 26-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 smi_1733 79d1b078c33752ed29f4ce9557bf13c5 778 Hamap MF_00092 Endonuclease MutS2 [mutS2]. 2 776 19.519 T 26-04-2016 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 smi_0661 7d8d6acc352e3ba8749ed8b567b1a180 249 PANTHER PTHR10434 1 216 6.3E-76 T 26-04-2016 smi_0661 7d8d6acc352e3ba8749ed8b567b1a180 249 Pfam PF01553 Acyltransferase 22 143 1.0E-18 T 26-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 smi_0661 7d8d6acc352e3ba8749ed8b567b1a180 249 SUPERFAMILY SSF69593 2 212 7.85E-56 T 26-04-2016 smi_0661 7d8d6acc352e3ba8749ed8b567b1a180 249 SMART SM00563 36 146 5.4E-27 T 26-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 smi_0661 7d8d6acc352e3ba8749ed8b567b1a180 249 Gene3D G3DSA:3.40.1130.10 4 204 9.8E-23 T 26-04-2016 smi_0661 7d8d6acc352e3ba8749ed8b567b1a180 249 PANTHER PTHR10434:SF21 1 216 6.3E-76 T 26-04-2016 smi_0231 7b801bc98f6be514f98e7feb6aedfbd2 883 Gene3D G3DSA:3.40.605.10 13 236 3.1E-23 T 26-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 smi_0231 7b801bc98f6be514f98e7feb6aedfbd2 883 Gene3D G3DSA:1.20.1090.10 660 872 4.2E-67 T 26-04-2016 smi_0231 7b801bc98f6be514f98e7feb6aedfbd2 883 Pfam PF00465 Iron-containing alcohol dehydrogenase 473 861 3.3E-113 T 26-04-2016 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 smi_0231 7b801bc98f6be514f98e7feb6aedfbd2 883 Pfam PF00171 Aldehyde dehydrogenase family 14 419 1.7E-27 T 26-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 smi_0231 7b801bc98f6be514f98e7feb6aedfbd2 883 SUPERFAMILY SSF56796 464 876 1.83E-113 T 26-04-2016 smi_0231 7b801bc98f6be514f98e7feb6aedfbd2 883 Gene3D G3DSA:3.40.50.1970 466 658 1.3E-63 T 26-04-2016 smi_0231 7b801bc98f6be514f98e7feb6aedfbd2 883 PANTHER PTHR11496 380 877 0.0 T 26-04-2016 smi_0231 7b801bc98f6be514f98e7feb6aedfbd2 883 PANTHER PTHR11496:SF79 380 877 0.0 T 26-04-2016 smi_0231 7b801bc98f6be514f98e7feb6aedfbd2 883 SUPERFAMILY SSF53720 18 279 5.37E-81 T 26-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 smi_0231 7b801bc98f6be514f98e7feb6aedfbd2 883 SUPERFAMILY SSF53720 307 469 5.37E-81 T 26-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 smi_0231 7b801bc98f6be514f98e7feb6aedfbd2 883 PIRSF PIRSF000111 3 876 0.0 T 26-04-2016 IPR012079 Bifunctional aldehyde-alcohol dehydrogenase GO:0004022|GO:0006066|GO:0008774|GO:0015976|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00592+1.1.1.1|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00650+1.2.1.10|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7085|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7180|MetaCyc: PWY-7396 smi_0231 7b801bc98f6be514f98e7feb6aedfbd2 883 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 647 675 - T 26-04-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 smi_0231 7b801bc98f6be514f98e7feb6aedfbd2 883 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 733 753 - T 26-04-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 smi_0231 7b801bc98f6be514f98e7feb6aedfbd2 883 Gene3D G3DSA:3.40.309.10 329 421 1.0E-29 T 26-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 smi_0231 7b801bc98f6be514f98e7feb6aedfbd2 883 Gene3D G3DSA:3.40.309.10 237 284 1.0E-29 T 26-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 smi_1847 01b0faacac2bf6734300efa7062c713a 1202 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 216 892 1.4E-291 T 26-04-2016 IPR010243 DNA-directed RNA polymerase, beta subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 smi_1847 01b0faacac2bf6734300efa7062c713a 1202 Gene3D G3DSA:2.40.50.100 677 747 1.1E-26 T 26-04-2016 smi_1847 01b0faacac2bf6734300efa7062c713a 1202 ProSitePatterns PS01166 RNA polymerases beta chain signature. 918 930 - T 26-04-2016 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 smi_1847 01b0faacac2bf6734300efa7062c713a 1202 Pfam PF04563 RNA polymerase beta subunit 28 460 3.3E-27 T 26-04-2016 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 smi_1847 01b0faacac2bf6734300efa7062c713a 1202 Pfam PF10385 RNA polymerase beta subunit external 1 domain 551 618 3.9E-22 T 26-04-2016 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 smi_1847 01b0faacac2bf6734300efa7062c713a 1202 Pfam PF00562 RNA polymerase Rpb2, domain 6 679 1065 7.9E-164 T 26-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 smi_1847 01b0faacac2bf6734300efa7062c713a 1202 Pfam PF04560 RNA polymerase Rpb2, domain 7 1067 1141 9.1E-26 T 26-04-2016 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 smi_1847 01b0faacac2bf6734300efa7062c713a 1202 Gene3D G3DSA:2.40.270.10 748 775 3.2E-80 T 26-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 smi_1847 01b0faacac2bf6734300efa7062c713a 1202 Gene3D G3DSA:2.40.270.10 915 1043 3.2E-80 T 26-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 smi_1847 01b0faacac2bf6734300efa7062c713a 1202 Pfam PF04565 RNA polymerase Rpb2, domain 3 473 538 1.3E-27 T 26-04-2016 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 smi_1847 01b0faacac2bf6734300efa7062c713a 1202 Gene3D G3DSA:3.90.1100.10 621 675 1.5E-144 T 26-04-2016 smi_1847 01b0faacac2bf6734300efa7062c713a 1202 Gene3D G3DSA:3.90.1100.10 405 551 1.5E-144 T 26-04-2016 smi_1847 01b0faacac2bf6734300efa7062c713a 1202 Gene3D G3DSA:3.90.1100.10 21 140 1.5E-144 T 26-04-2016 smi_1847 01b0faacac2bf6734300efa7062c713a 1202 Gene3D G3DSA:2.30.150.10 552 618 2.0E-24 T 26-04-2016 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 smi_1847 01b0faacac2bf6734300efa7062c713a 1202 PANTHER PTHR20856:SF20 383 1147 0.0 T 26-04-2016 smi_1847 01b0faacac2bf6734300efa7062c713a 1202 PANTHER PTHR20856 383 1147 0.0 T 26-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 smi_1847 01b0faacac2bf6734300efa7062c713a 1202 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 15 1143 12.25 T 26-04-2016 IPR010243 DNA-directed RNA polymerase, beta subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 smi_1847 01b0faacac2bf6734300efa7062c713a 1202 Pfam PF04561 RNA polymerase Rpb2, domain 2 368 414 2.2E-7 T 26-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 smi_1847 01b0faacac2bf6734300efa7062c713a 1202 Pfam PF04561 RNA polymerase Rpb2, domain 2 140 292 9.9E-24 T 26-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 smi_1847 01b0faacac2bf6734300efa7062c713a 1202 Gene3D G3DSA:3.90.1110.10 380 404 1.9E-63 T 26-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 smi_1847 01b0faacac2bf6734300efa7062c713a 1202 Gene3D G3DSA:3.90.1110.10 142 300 1.9E-63 T 26-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 smi_1847 01b0faacac2bf6734300efa7062c713a 1202 Gene3D G3DSA:2.40.50.150 782 914 3.3E-58 T 26-04-2016 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 smi_1847 01b0faacac2bf6734300efa7062c713a 1202 SUPERFAMILY SSF64484 382 1150 0.0 T 26-04-2016 smi_1847 01b0faacac2bf6734300efa7062c713a 1202 SUPERFAMILY SSF64484 14 291 0.0 T 26-04-2016 smi_1847 01b0faacac2bf6734300efa7062c713a 1202 PANTHER PTHR20856:SF20 2 291 0.0 T 26-04-2016 smi_1847 01b0faacac2bf6734300efa7062c713a 1202 PANTHER PTHR20856 2 291 0.0 T 26-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 smi_1354 cb82504e1aa3b0b70a7cbf1d5f6d57d3 380 Gene3D G3DSA:3.40.640.10 14 246 7.0E-76 T 26-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 smi_1354 cb82504e1aa3b0b70a7cbf1d5f6d57d3 380 PANTHER PTHR11601:SF50 1 380 1.4E-220 T 26-04-2016 smi_1354 cb82504e1aa3b0b70a7cbf1d5f6d57d3 380 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 193 212 - T 26-04-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site smi_1354 cb82504e1aa3b0b70a7cbf1d5f6d57d3 380 PIRSF PIRSF005572 1 380 8.7E-113 T 26-04-2016 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 smi_1354 cb82504e1aa3b0b70a7cbf1d5f6d57d3 380 Pfam PF00266 Aminotransferase class-V 2 365 1.1E-67 T 26-04-2016 IPR000192 Aminotransferase class V domain smi_1354 cb82504e1aa3b0b70a7cbf1d5f6d57d3 380 Gene3D G3DSA:3.90.1150.10 247 370 5.4E-30 T 26-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 smi_1354 cb82504e1aa3b0b70a7cbf1d5f6d57d3 380 SUPERFAMILY SSF53383 1 373 1.85E-93 T 26-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase smi_1354 cb82504e1aa3b0b70a7cbf1d5f6d57d3 380 PANTHER PTHR11601 1 380 1.4E-220 T 26-04-2016 smi_0830 68d11cab68f724249bec5d17ef143d07 239 PANTHER PTHR32125 1 222 3.3E-113 T 26-04-2016 smi_0830 68d11cab68f724249bec5d17ef143d07 239 PIRSF PIRSF000386 1 239 1.4E-98 T 26-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 smi_0830 68d11cab68f724249bec5d17ef143d07 239 SUPERFAMILY SSF75217 1 237 7.85E-95 T 26-04-2016 IPR029028 Alpha/beta knot methyltransferases smi_0830 68d11cab68f724249bec5d17ef143d07 239 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 22 215 1.4E-65 T 26-04-2016 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 smi_0830 68d11cab68f724249bec5d17ef143d07 239 Gene3D G3DSA:1.10.1270.20 155 237 3.2E-36 T 26-04-2016 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 smi_0830 68d11cab68f724249bec5d17ef143d07 239 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 1 228 2.4E-92 T 26-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 smi_0830 68d11cab68f724249bec5d17ef143d07 239 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 239 108.327 T 26-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 smi_0830 68d11cab68f724249bec5d17ef143d07 239 Gene3D G3DSA:3.40.1280.10 1 154 6.7E-62 T 26-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal smi_0830 68d11cab68f724249bec5d17ef143d07 239 PANTHER PTHR32125:SF1 1 222 3.3E-113 T 26-04-2016 smi_1294 2a0cd0106cf903e0f6aa62e50c145749 161 PIRSF PIRSF006181 5 159 3.4E-49 T 26-04-2016 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC smi_1294 2a0cd0106cf903e0f6aa62e50c145749 161 PANTHER PTHR30411 38 157 1.5E-44 T 26-04-2016 smi_1294 2a0cd0106cf903e0f6aa62e50c145749 161 Gene3D G3DSA:3.90.960.10 3 157 3.2E-43 T 26-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 smi_1294 2a0cd0106cf903e0f6aa62e50c145749 161 Pfam PF04073 Aminoacyl-tRNA editing domain 39 147 9.3E-20 T 26-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 smi_1294 2a0cd0106cf903e0f6aa62e50c145749 161 PANTHER PTHR30411:SF0 38 157 1.5E-44 T 26-04-2016 smi_1294 2a0cd0106cf903e0f6aa62e50c145749 161 SUPERFAMILY SSF55826 7 155 1.7E-35 T 26-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 smi_0774 015485e97c1b69f00f1113dd09eecb5f 289 SUPERFAMILY SSF54211 1 143 2.81E-30 T 26-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold smi_0774 015485e97c1b69f00f1113dd09eecb5f 289 PIRSF PIRSF000676 1 289 2.6E-89 T 26-04-2016 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702|UniPathway: UPA00050 smi_0774 015485e97c1b69f00f1113dd09eecb5f 289 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 78 89 - T 26-04-2016 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 smi_0774 015485e97c1b69f00f1113dd09eecb5f 289 TIGRFAM TIGR00191 thrB: homoserine kinase 1 287 3.4E-73 T 26-04-2016 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702|UniPathway: UPA00050 smi_0774 015485e97c1b69f00f1113dd09eecb5f 289 PRINTS PR00958 Homoserine kinase signature 8 23 2.2E-39 T 26-04-2016 smi_0774 015485e97c1b69f00f1113dd09eecb5f 289 PRINTS PR00958 Homoserine kinase signature 85 100 2.2E-39 T 26-04-2016 smi_0774 015485e97c1b69f00f1113dd09eecb5f 289 PRINTS PR00958 Homoserine kinase signature 157 174 2.2E-39 T 26-04-2016 smi_0774 015485e97c1b69f00f1113dd09eecb5f 289 PRINTS PR00958 Homoserine kinase signature 119 132 2.2E-39 T 26-04-2016 smi_0774 015485e97c1b69f00f1113dd09eecb5f 289 PRINTS PR00958 Homoserine kinase signature 237 252 2.2E-39 T 26-04-2016 smi_0774 015485e97c1b69f00f1113dd09eecb5f 289 Gene3D G3DSA:3.30.230.10 1 144 9.6E-45 T 26-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup smi_0774 015485e97c1b69f00f1113dd09eecb5f 289 PANTHER PTHR20861 1 287 1.5E-92 T 26-04-2016 smi_0774 015485e97c1b69f00f1113dd09eecb5f 289 SUPERFAMILY SSF55060 154 266 1.54E-31 T 26-04-2016 IPR013750 GHMP kinase, C-terminal domain smi_0774 015485e97c1b69f00f1113dd09eecb5f 289 Pfam PF00288 GHMP kinases N terminal domain 72 132 1.1E-13 T 26-04-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 smi_0774 015485e97c1b69f00f1113dd09eecb5f 289 PANTHER PTHR20861:SF1 1 287 1.5E-92 T 26-04-2016 smi_0774 015485e97c1b69f00f1113dd09eecb5f 289 Pfam PF08544 GHMP kinases C terminal 193 268 9.3E-9 T 26-04-2016 IPR013750 GHMP kinase, C-terminal domain smi_0774 015485e97c1b69f00f1113dd09eecb5f 289 Hamap MF_00384 Homoserine kinase [thrB]. 1 286 31.521 T 26-04-2016 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702|UniPathway: UPA00050 smi_0774 015485e97c1b69f00f1113dd09eecb5f 289 Gene3D G3DSA:3.30.70.890 150 282 9.6E-38 T 26-04-2016 IPR013750 GHMP kinase, C-terminal domain smi_1619 213f86a532505571f0f9234633ee82b7 390 SUPERFAMILY SSF53901 3 166 2.88E-38 T 26-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 smi_1619 213f86a532505571f0f9234633ee82b7 390 TIGRFAM TIGR01835 HMG-CoA-S_prok: hydroxymethylglutaryl-CoA synthase 3 385 1.2E-177 T 26-04-2016 IPR011554 Hydroxymethylglutaryl-CoA synthase, prokaryotic KEGG: 00072+2.3.3.10|KEGG: 00280+2.3.3.10|KEGG: 00650+2.3.3.10|KEGG: 00900+2.3.3.10|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7571|MetaCyc: PWY-922|UniPathway: UPA00058 smi_1619 213f86a532505571f0f9234633ee82b7 390 Pfam PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal 246 350 2.5E-14 T 26-04-2016 IPR013746 Hydroxymethylglutaryl-coenzyme A synthase C-terminal domain GO:0004421|GO:0008299 KEGG: 00072+2.3.3.10|KEGG: 00280+2.3.3.10|KEGG: 00650+2.3.3.10|KEGG: 00900+2.3.3.10|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7571|MetaCyc: PWY-922|Reactome: REACT_22258|UniPathway: UPA00058 smi_1619 213f86a532505571f0f9234633ee82b7 390 PANTHER PTHR11877 3 390 1.9E-101 T 26-04-2016 smi_1619 213f86a532505571f0f9234633ee82b7 390 Pfam PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal 11 164 2.5E-11 T 26-04-2016 IPR013528 Hydroxymethylglutaryl-coenzyme A synthase, N-terminal GO:0004421|GO:0008299 Reactome: REACT_22258 smi_1619 213f86a532505571f0f9234633ee82b7 390 SUPERFAMILY SSF53901 168 387 2.09E-65 T 26-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 smi_1619 213f86a532505571f0f9234633ee82b7 390 Gene3D G3DSA:3.40.47.10 1 250 8.1E-84 T 26-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 smi_1619 213f86a532505571f0f9234633ee82b7 390 PANTHER PTHR11877:SF26 3 390 1.9E-101 T 26-04-2016 smi_0263 8da897cba5a59908151cb8420b557876 693 SUPERFAMILY SSF54980 400 478 6.12E-25 T 26-04-2016 IPR009022 Elongation factor G, III-V domain smi_0263 8da897cba5a59908151cb8420b557876 693 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 180 1.1E-41 T 26-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 smi_0263 8da897cba5a59908151cb8420b557876 693 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.3E-16 T 26-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 smi_0263 8da897cba5a59908151cb8420b557876 693 PRINTS PR00315 GTP-binding elongation factor signature 94 105 1.3E-16 T 26-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 smi_0263 8da897cba5a59908151cb8420b557876 693 PRINTS PR00315 GTP-binding elongation factor signature 130 139 1.3E-16 T 26-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 smi_0263 8da897cba5a59908151cb8420b557876 693 PRINTS PR00315 GTP-binding elongation factor signature 12 25 1.3E-16 T 26-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 smi_0263 8da897cba5a59908151cb8420b557876 693 PRINTS PR00315 GTP-binding elongation factor signature 78 88 1.3E-16 T 26-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 smi_0263 8da897cba5a59908151cb8420b557876 693 SMART SM00838 598 685 1.9E-50 T 26-04-2016 IPR000640 Translation elongation factor EFG, V domain smi_0263 8da897cba5a59908151cb8420b557876 693 Gene3D G3DSA:3.30.70.240 601 688 4.4E-33 T 26-04-2016 IPR000640 Translation elongation factor EFG, V domain smi_0263 8da897cba5a59908151cb8420b557876 693 SUPERFAMILY SSF54211 477 597 7.08E-44 T 26-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold smi_0263 8da897cba5a59908151cb8420b557876 693 PANTHER PTHR23115:SF66 1 177 0.0 T 26-04-2016 smi_0263 8da897cba5a59908151cb8420b557876 693 PANTHER PTHR23115:SF66 301 689 0.0 T 26-04-2016 smi_0263 8da897cba5a59908151cb8420b557876 693 PANTHER PTHR23115:SF66 253 281 0.0 T 26-04-2016 smi_0263 8da897cba5a59908151cb8420b557876 693 Pfam PF03144 Elongation factor Tu domain 2 322 389 4.2E-14 T 26-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 smi_0263 8da897cba5a59908151cb8420b557876 693 TIGRFAM TIGR00484 EF-G: translation elongation factor G 1 690 0.0 T 26-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 smi_0263 8da897cba5a59908151cb8420b557876 693 SMART SM00889 478 596 1.3E-72 T 26-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 smi_0263 8da897cba5a59908151cb8420b557876 693 Hamap MF_00054_B Elongation factor G [fusA]. 6 689 110.04 T 26-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 smi_0263 8da897cba5a59908151cb8420b557876 693 Gene3D G3DSA:3.30.230.10 482 600 2.0E-49 T 26-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup smi_0263 8da897cba5a59908151cb8420b557876 693 Gene3D G3DSA:3.40.50.300 7 285 9.5E-110 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0263 8da897cba5a59908151cb8420b557876 693 Pfam PF00009 Elongation factor Tu GTP binding domain 9 280 7.2E-71 T 26-04-2016 smi_0263 8da897cba5a59908151cb8420b557876 693 Pfam PF14492 Elongation Factor G, domain II 402 475 1.1E-33 T 26-04-2016 IPR009022 Elongation factor G, III-V domain smi_0263 8da897cba5a59908151cb8420b557876 693 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 26-04-2016 IPR031157 Tr-type G domain, conserved site smi_0263 8da897cba5a59908151cb8420b557876 693 PANTHER PTHR23115 1 177 0.0 T 26-04-2016 smi_0263 8da897cba5a59908151cb8420b557876 693 PANTHER PTHR23115 301 689 0.0 T 26-04-2016 smi_0263 8da897cba5a59908151cb8420b557876 693 PANTHER PTHR23115 253 281 0.0 T 26-04-2016 smi_0263 8da897cba5a59908151cb8420b557876 693 Pfam PF03764 Elongation factor G, domain IV 477 596 2.0E-46 T 26-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 smi_0263 8da897cba5a59908151cb8420b557876 693 Gene3D G3DSA:3.30.70.870 404 478 1.1E-37 T 26-04-2016 smi_0263 8da897cba5a59908151cb8420b557876 693 SUPERFAMILY SSF50447 303 399 3.53E-34 T 26-04-2016 IPR009000 Translation protein, beta-barrel domain smi_0263 8da897cba5a59908151cb8420b557876 693 SUPERFAMILY SSF50447 246 273 3.53E-34 T 26-04-2016 IPR009000 Translation protein, beta-barrel domain smi_0263 8da897cba5a59908151cb8420b557876 693 Gene3D G3DSA:2.40.30.10 303 403 6.2E-37 T 26-04-2016 smi_0263 8da897cba5a59908151cb8420b557876 693 SUPERFAMILY SSF52540 6 280 1.87E-112 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0263 8da897cba5a59908151cb8420b557876 693 Pfam PF00679 Elongation factor G C-terminus 599 684 6.0E-30 T 26-04-2016 IPR000640 Translation elongation factor EFG, V domain smi_0263 8da897cba5a59908151cb8420b557876 693 SUPERFAMILY SSF54980 601 688 9.59E-30 T 26-04-2016 IPR009022 Elongation factor G, III-V domain smi_0029 2792ebafc988686310e55560930917a1 231 PANTHER PTHR31801 1 231 7.5E-42 T 26-04-2016 smi_0029 2792ebafc988686310e55560930917a1 231 Gene3D G3DSA:3.60.160.10 1 229 4.6E-78 T 26-04-2016 IPR002838 Mitochondrial biogenesis protein AIM24 smi_0029 2792ebafc988686310e55560930917a1 231 PANTHER PTHR31801:SF0 1 231 7.5E-42 T 26-04-2016 smi_0029 2792ebafc988686310e55560930917a1 231 SUPERFAMILY SSF51219 2 226 3.92E-64 T 26-04-2016 IPR016031 Tryptophan RNA-binding attenuator protein-like domain smi_0029 2792ebafc988686310e55560930917a1 231 Pfam PF01987 Mitochondrial biogenesis AIM24 10 213 1.3E-50 T 26-04-2016 IPR002838 Mitochondrial biogenesis protein AIM24 smi_0029 2792ebafc988686310e55560930917a1 231 TIGRFAM TIGR00266 TIGR00266: TIGR00266 family protein 1 226 1.2E-35 T 26-04-2016 IPR002838 Mitochondrial biogenesis protein AIM24 smi_1172 2a473149a30eeb251e219e7eaa48977e 633 Pfam PF00005 ABC transporter 20 191 2.0E-28 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 smi_1172 2a473149a30eeb251e219e7eaa48977e 633 Pfam PF00005 ABC transporter 344 472 1.0E-18 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 smi_1172 2a473149a30eeb251e219e7eaa48977e 633 SUPERFAMILY SSF52540 132 245 2.18E-43 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1172 2a473149a30eeb251e219e7eaa48977e 633 SUPERFAMILY SSF52540 3 94 2.18E-43 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1172 2a473149a30eeb251e219e7eaa48977e 633 Gene3D G3DSA:3.40.50.300 7 102 3.5E-46 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1172 2a473149a30eeb251e219e7eaa48977e 633 Gene3D G3DSA:3.40.50.300 139 280 3.5E-46 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1172 2a473149a30eeb251e219e7eaa48977e 633 Gene3D G3DSA:3.40.50.300 328 566 5.0E-39 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1172 2a473149a30eeb251e219e7eaa48977e 633 SMART SM00382 351 518 2.5E-10 T 26-04-2016 IPR003593 AAA+ ATPase domain smi_1172 2a473149a30eeb251e219e7eaa48977e 633 SMART SM00382 28 243 1.1E-8 T 26-04-2016 IPR003593 AAA+ ATPase domain smi_1172 2a473149a30eeb251e219e7eaa48977e 633 Pfam PF12848 ABC transporter 231 311 7.0E-26 T 26-04-2016 IPR032781 ABC-transporter extension domain smi_1172 2a473149a30eeb251e219e7eaa48977e 633 ProSitePatterns PS00211 ABC transporters family signature. 444 458 - T 26-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 smi_1172 2a473149a30eeb251e219e7eaa48977e 633 SUPERFAMILY SSF52540 310 531 1.98E-40 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1172 2a473149a30eeb251e219e7eaa48977e 633 PANTHER PTHR19211:SF64 1 568 0.0 T 26-04-2016 smi_1172 2a473149a30eeb251e219e7eaa48977e 633 PANTHER PTHR19211 1 568 0.0 T 26-04-2016 smi_1172 2a473149a30eeb251e219e7eaa48977e 633 Pfam PF16326 ABC transporter C-terminal domain 569 631 1.0E-8 T 26-04-2016 IPR032524 ABC transporter Uup, C-terminal GO:0003677 smi_0482 84c20f8ecc873a98d865b9cdbb1023ca 540 Hamap MF_00600 60 kDa chaperonin [groL]. 1 539 41.103 T 26-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 smi_0482 84c20f8ecc873a98d865b9cdbb1023ca 540 TIGRFAM TIGR02348 GroEL: chaperonin GroL 2 523 2.9E-253 T 26-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 smi_0482 84c20f8ecc873a98d865b9cdbb1023ca 540 ProSitePatterns PS00296 Chaperonins cpn60 signature. 403 414 - T 26-04-2016 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 smi_0482 84c20f8ecc873a98d865b9cdbb1023ca 540 SUPERFAMILY SSF48592 6 133 1.83E-78 T 26-04-2016 smi_0482 84c20f8ecc873a98d865b9cdbb1023ca 540 SUPERFAMILY SSF48592 404 518 1.83E-78 T 26-04-2016 smi_0482 84c20f8ecc873a98d865b9cdbb1023ca 540 Pfam PF00118 TCP-1/cpn60 chaperonin family 22 521 6.7E-106 T 26-04-2016 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 smi_0482 84c20f8ecc873a98d865b9cdbb1023ca 540 PANTHER PTHR11353 1 540 3.8E-243 T 26-04-2016 smi_0482 84c20f8ecc873a98d865b9cdbb1023ca 540 PRINTS PR00298 60kDa chaperonin signature 396 417 1.7E-73 T 26-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 smi_0482 84c20f8ecc873a98d865b9cdbb1023ca 540 PRINTS PR00298 60kDa chaperonin signature 266 289 1.7E-73 T 26-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 smi_0482 84c20f8ecc873a98d865b9cdbb1023ca 540 PRINTS PR00298 60kDa chaperonin signature 82 109 1.7E-73 T 26-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 smi_0482 84c20f8ecc873a98d865b9cdbb1023ca 540 PRINTS PR00298 60kDa chaperonin signature 348 373 1.7E-73 T 26-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 smi_0482 84c20f8ecc873a98d865b9cdbb1023ca 540 PRINTS PR00298 60kDa chaperonin signature 26 52 1.7E-73 T 26-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 smi_0482 84c20f8ecc873a98d865b9cdbb1023ca 540 SUPERFAMILY SSF52029 182 374 5.53E-85 T 26-04-2016 IPR027409 GroEL-like apical domain smi_0482 84c20f8ecc873a98d865b9cdbb1023ca 540 Gene3D G3DSA:3.50.7.10 195 365 1.4E-96 T 26-04-2016 IPR027409 GroEL-like apical domain smi_0482 84c20f8ecc873a98d865b9cdbb1023ca 540 SUPERFAMILY SSF54849 136 203 3.66E-26 T 26-04-2016 smi_0482 84c20f8ecc873a98d865b9cdbb1023ca 540 Gene3D G3DSA:1.10.560.10 366 515 3.4E-44 T 26-04-2016 IPR027413 GroEL-like equatorial domain smi_0482 84c20f8ecc873a98d865b9cdbb1023ca 540 Gene3D G3DSA:1.10.560.10 3 194 4.7E-49 T 26-04-2016 IPR027413 GroEL-like equatorial domain smi_1622 84b789ac82faa6727c27a5e9691ceab4 632 PANTHER PTHR24362 1 342 5.7E-113 T 26-04-2016 smi_1622 84b789ac82faa6727c27a5e9691ceab4 632 PANTHER PTHR24362 547 571 5.7E-113 T 26-04-2016 smi_1622 84b789ac82faa6727c27a5e9691ceab4 632 PANTHER PTHR24362:SF160 1 342 5.7E-113 T 26-04-2016 smi_1622 84b789ac82faa6727c27a5e9691ceab4 632 PANTHER PTHR24362:SF160 547 571 5.7E-113 T 26-04-2016 smi_1622 84b789ac82faa6727c27a5e9691ceab4 632 Gene3D G3DSA:3.30.200.20 6 110 2.6E-30 T 26-04-2016 smi_1622 84b789ac82faa6727c27a5e9691ceab4 632 Gene3D G3DSA:1.10.510.10 111 326 1.1E-48 T 26-04-2016 smi_1622 84b789ac82faa6727c27a5e9691ceab4 632 SMART SM00740 506 577 2.4E-9 T 26-04-2016 IPR005543 PASTA domain smi_1622 84b789ac82faa6727c27a5e9691ceab4 632 SMART SM00740 434 505 2.7E-15 T 26-04-2016 IPR005543 PASTA domain smi_1622 84b789ac82faa6727c27a5e9691ceab4 632 SMART SM00740 366 433 1.1E-20 T 26-04-2016 IPR005543 PASTA domain smi_1622 84b789ac82faa6727c27a5e9691ceab4 632 Pfam PF03793 PASTA domain 371 432 5.3E-17 T 26-04-2016 IPR005543 PASTA domain smi_1622 84b789ac82faa6727c27a5e9691ceab4 632 Pfam PF03793 PASTA domain 441 505 1.2E-10 T 26-04-2016 IPR005543 PASTA domain smi_1622 84b789ac82faa6727c27a5e9691ceab4 632 Pfam PF03793 PASTA domain 510 579 3.9E-9 T 26-04-2016 IPR005543 PASTA domain smi_1622 84b789ac82faa6727c27a5e9691ceab4 632 SMART SM00220 12 273 2.8E-65 T 26-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 smi_1622 84b789ac82faa6727c27a5e9691ceab4 632 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 132 144 - T 26-04-2016 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 smi_1622 84b789ac82faa6727c27a5e9691ceab4 632 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 18 42 - T 26-04-2016 IPR017441 Protein kinase, ATP binding site GO:0005524 smi_1622 84b789ac82faa6727c27a5e9691ceab4 632 SUPERFAMILY SSF56112 8 309 5.13E-80 T 26-04-2016 IPR011009 Protein kinase-like domain smi_1622 84b789ac82faa6727c27a5e9691ceab4 632 Pfam PF00069 Protein kinase domain 12 227 2.4E-52 T 26-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 smi_1147 2cc859733b341e45df42abd648ff9f5b 129 Pfam PF13359 DDE superfamily endonuclease 1 111 2.5E-13 T 26-04-2016 IPR027806 Harbinger transposase-derived nuclease domain smi_1693 2cc859733b341e45df42abd648ff9f5b 129 Pfam PF13359 DDE superfamily endonuclease 1 111 2.5E-13 T 26-04-2016 IPR027806 Harbinger transposase-derived nuclease domain smi_0849 1a02b2737a87b31e17b4e773f004a6e0 103 PANTHER PTHR39203 1 94 2.2E-25 T 26-04-2016 smi_0849 1a02b2737a87b31e17b4e773f004a6e0 103 SMART SM01022 24 101 8.0E-11 T 26-04-2016 IPR007374 ASCH domain smi_0849 1a02b2737a87b31e17b4e773f004a6e0 103 Gene3D G3DSA:3.10.400.10 1 94 2.2E-35 T 26-04-2016 smi_0849 1a02b2737a87b31e17b4e773f004a6e0 103 Pfam PF04266 ASCH domain 24 94 1.4E-14 T 26-04-2016 IPR007374 ASCH domain smi_0849 1a02b2737a87b31e17b4e773f004a6e0 103 SUPERFAMILY SSF88697 2 94 2.36E-28 T 26-04-2016 IPR015947 PUA-like domain smi_0849 1a02b2737a87b31e17b4e773f004a6e0 103 PIRSF PIRSF021320 1 96 4.8E-33 T 26-04-2016 IPR009326 Protein of unknown function DUF984 smi_1226 bec6648dc7c92fda80b31715075b7692 262 SUPERFAMILY SSF56112 1 254 1.51E-45 T 26-04-2016 IPR011009 Protein kinase-like domain smi_1226 bec6648dc7c92fda80b31715075b7692 262 Gene3D G3DSA:3.90.1200.10 39 252 1.0E-33 T 26-04-2016 smi_1226 bec6648dc7c92fda80b31715075b7692 262 Pfam PF01633 Choline/ethanolamine kinase 12 207 7.4E-37 T 26-04-2016 smi_1226 bec6648dc7c92fda80b31715075b7692 262 PANTHER PTHR40086 1 254 1.1E-64 T 26-04-2016 smi_0981 768ef965bf1e8a1b0561801a2b1e4f16 600 Gene3D G3DSA:3.40.390.10 345 422 1.1E-4 T 26-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 smi_0981 768ef965bf1e8a1b0561801a2b1e4f16 600 Pfam PF08439 Oligopeptidase F 112 181 2.2E-21 T 26-04-2016 IPR013647 Oligopeptidase F, N-terminal domain smi_0981 768ef965bf1e8a1b0561801a2b1e4f16 600 SUPERFAMILY SSF55486 53 598 3.67E-130 T 26-04-2016 smi_0981 768ef965bf1e8a1b0561801a2b1e4f16 600 Pfam PF01432 Peptidase family M3 202 581 1.7E-82 T 26-04-2016 IPR001567 Peptidase M3A/M3B GO:0004222|GO:0006508 smi_0981 768ef965bf1e8a1b0561801a2b1e4f16 600 PANTHER PTHR11804 146 596 5.9E-123 T 26-04-2016 smi_0981 768ef965bf1e8a1b0561801a2b1e4f16 600 PANTHER PTHR11804:SF8 146 596 5.9E-123 T 26-04-2016 smi_0981 768ef965bf1e8a1b0561801a2b1e4f16 600 TIGRFAM TIGR00181 pepF: oligoendopeptidase F 5 592 4.4E-186 T 26-04-2016 IPR004438 Peptidase M3B, oligoendopeptidase F GO:0004222|GO:0006508 smi_0981 768ef965bf1e8a1b0561801a2b1e4f16 600 Gene3D G3DSA:1.10.287.830 179 225 2.6E-21 T 26-04-2016 smi_0220 51d026cfa86850c9efe0124974dbd995 93 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 3 89 2.4E-14 T 26-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 smi_0220 51d026cfa86850c9efe0124974dbd995 93 Gene3D G3DSA:3.40.50.270 1 92 4.7E-17 T 26-04-2016 smi_0220 51d026cfa86850c9efe0124974dbd995 93 SUPERFAMILY SSF52794 1 92 1.86E-20 T 26-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 smi_0220 51d026cfa86850c9efe0124974dbd995 93 PANTHER PTHR33843 1 93 1.4E-15 T 26-04-2016 smi_2063 dd80284a594aceca3b601b50fd82cd67 415 PANTHER PTHR33308:SF2 227 413 2.4E-15 T 26-04-2016 smi_2063 dd80284a594aceca3b601b50fd82cd67 415 PRINTS PR01852 Streptococcal non-M secreted SibA protein signature 378 401 4.8E-48 T 26-04-2016 IPR009148 Streptococcal non-M secreted SibA smi_2063 dd80284a594aceca3b601b50fd82cd67 415 PRINTS PR01852 Streptococcal non-M secreted SibA protein signature 310 332 4.8E-48 T 26-04-2016 IPR009148 Streptococcal non-M secreted SibA smi_2063 dd80284a594aceca3b601b50fd82cd67 415 PRINTS PR01852 Streptococcal non-M secreted SibA protein signature 335 359 4.8E-48 T 26-04-2016 IPR009148 Streptococcal non-M secreted SibA smi_2063 dd80284a594aceca3b601b50fd82cd67 415 PRINTS PR01852 Streptococcal non-M secreted SibA protein signature 214 241 4.8E-48 T 26-04-2016 IPR009148 Streptococcal non-M secreted SibA smi_2063 dd80284a594aceca3b601b50fd82cd67 415 SUPERFAMILY SSF54001 294 415 2.75E-25 T 26-04-2016 smi_2063 dd80284a594aceca3b601b50fd82cd67 415 Pfam PF05257 CHAP domain 308 385 2.7E-14 T 26-04-2016 IPR007921 CHAP domain smi_2063 dd80284a594aceca3b601b50fd82cd67 415 PANTHER PTHR33308 227 413 2.4E-15 T 26-04-2016 smi_1162 660c214fdb1d67beb4ccc2e75c0ac9d7 214 PANTHER PTHR10000 5 211 9.7E-68 T 26-04-2016 smi_1162 660c214fdb1d67beb4ccc2e75c0ac9d7 214 TIGRFAM TIGR00338 serB: phosphoserine phosphatase SerB 2 210 4.8E-69 T 26-04-2016 smi_1162 660c214fdb1d67beb4ccc2e75c0ac9d7 214 Gene3D G3DSA:1.10.150.210 19 68 1.3E-24 T 26-04-2016 IPR023190 Phosphoserine phosphatase, domain 2 GO:0004647|GO:0006564 KEGG: 00260+3.1.3.3|KEGG: 00680+3.1.3.3|UniPathway: UPA00135 smi_1162 660c214fdb1d67beb4ccc2e75c0ac9d7 214 PANTHER PTHR10000:SF7 5 211 9.7E-68 T 26-04-2016 smi_1162 660c214fdb1d67beb4ccc2e75c0ac9d7 214 SUPERFAMILY SSF56784 6 210 2.17E-50 T 26-04-2016 IPR023214 HAD-like domain smi_1162 660c214fdb1d67beb4ccc2e75c0ac9d7 214 Pfam PF12710 haloacid dehalogenase-like hydrolase 9 176 7.5E-22 T 26-04-2016 smi_1162 660c214fdb1d67beb4ccc2e75c0ac9d7 214 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 8 178 4.5E-31 T 26-04-2016 IPR006383 HAD-superfamily hydrolase, subfamily IB, PSPase-like GO:0008152|GO:0016791 smi_1162 660c214fdb1d67beb4ccc2e75c0ac9d7 214 Gene3D G3DSA:3.40.50.1000 69 197 5.1E-38 T 26-04-2016 IPR023214 HAD-like domain smi_1519 c4b915dfa9f7a42b1213730637287cbd 120 Pfam PF00575 S1 RNA binding domain 2 73 4.9E-16 T 26-04-2016 IPR003029 S1 domain GO:0003676 smi_1519 c4b915dfa9f7a42b1213730637287cbd 120 PANTHER PTHR10724:SF1 1 111 3.9E-35 T 26-04-2016 smi_1519 c4b915dfa9f7a42b1213730637287cbd 120 SMART SM00316 2 73 2.0E-21 T 26-04-2016 IPR022967 RNA-binding domain, S1 smi_1519 c4b915dfa9f7a42b1213730637287cbd 120 SUPERFAMILY SSF50249 1 84 4.4E-20 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold smi_1519 c4b915dfa9f7a42b1213730637287cbd 120 Gene3D G3DSA:2.40.50.140 2 80 5.0E-23 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold smi_1519 c4b915dfa9f7a42b1213730637287cbd 120 PANTHER PTHR10724 1 111 3.9E-35 T 26-04-2016 smi_1860 acacd0d194fcb6018e9711db44c59a2b 323 SUPERFAMILY SSF52540 11 240 2.12E-50 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1860 acacd0d194fcb6018e9711db44c59a2b 323 SMART SM00382 42 170 5.5E-8 T 26-04-2016 IPR003593 AAA+ ATPase domain smi_1860 acacd0d194fcb6018e9711db44c59a2b 323 Gene3D G3DSA:1.10.8.60 174 246 7.3E-33 T 26-04-2016 smi_1860 acacd0d194fcb6018e9711db44c59a2b 323 PANTHER PTHR13779:SF25 3 323 2.5E-174 T 26-04-2016 smi_1860 acacd0d194fcb6018e9711db44c59a2b 323 Gene3D G3DSA:1.10.10.10 248 319 1.3E-32 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain smi_1860 acacd0d194fcb6018e9711db44c59a2b 323 SUPERFAMILY SSF46785 248 319 1.72E-23 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain smi_1860 acacd0d194fcb6018e9711db44c59a2b 323 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 241 323 1.0E-40 T 26-04-2016 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 smi_1860 acacd0d194fcb6018e9711db44c59a2b 323 Gene3D G3DSA:3.40.50.300 11 166 1.6E-30 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1860 acacd0d194fcb6018e9711db44c59a2b 323 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 3 226 1.2E-113 T 26-04-2016 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 smi_1860 acacd0d194fcb6018e9711db44c59a2b 323 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 15 317 2.8E-140 T 26-04-2016 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 smi_1860 acacd0d194fcb6018e9711db44c59a2b 323 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 323 165.446 T 26-04-2016 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 smi_1860 acacd0d194fcb6018e9711db44c59a2b 323 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 244 317 2.8E-31 T 26-04-2016 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 smi_1860 acacd0d194fcb6018e9711db44c59a2b 323 PANTHER PTHR13779 3 323 2.5E-174 T 26-04-2016 smi_1666 d24cccc3f887a6068627f1257b815383 488 PANTHER PTHR11895:SF7 2 481 1.4E-216 T 26-04-2016 smi_1666 d24cccc3f887a6068627f1257b815383 488 Hamap MF_00120 Glutamyl-tRNA(Gln) amidotransferase subunit A [gatA]. 11 475 89.66 T 26-04-2016 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 smi_1666 d24cccc3f887a6068627f1257b815383 488 ProSitePatterns PS00571 Amidases signature. 150 181 - T 26-04-2016 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 smi_1666 d24cccc3f887a6068627f1257b815383 488 SUPERFAMILY SSF75304 1 481 1.96E-157 T 26-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 smi_1666 d24cccc3f887a6068627f1257b815383 488 TIGRFAM TIGR00132 gatA: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit 12 475 1.2E-184 T 26-04-2016 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 smi_1666 d24cccc3f887a6068627f1257b815383 488 Pfam PF01425 Amidase 24 463 1.3E-147 T 26-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 smi_1666 d24cccc3f887a6068627f1257b815383 488 PANTHER PTHR11895 2 481 1.4E-216 T 26-04-2016 IPR000120 Amidase GO:0016884 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 smi_1666 d24cccc3f887a6068627f1257b815383 488 Gene3D G3DSA:3.90.1300.10 3 482 1.1E-169 T 26-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 smi_1979 c5f239ff3aac06517605b93ca041e72a 223 SUPERFAMILY SSF55021 140 220 5.39E-19 T 26-04-2016 smi_1979 c5f239ff3aac06517605b93ca041e72a 223 Gene3D G3DSA:3.30.70.260 139 220 1.0E-23 T 26-04-2016 smi_1979 c5f239ff3aac06517605b93ca041e72a 223 PANTHER PTHR30182 1 223 4.3E-119 T 26-04-2016 smi_1979 c5f239ff3aac06517605b93ca041e72a 223 Pfam PF01842 ACT domain 152 214 1.2E-9 T 26-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 smi_1979 c5f239ff3aac06517605b93ca041e72a 223 PANTHER PTHR30182:SF2 1 223 4.3E-119 T 26-04-2016 smi_1979 c5f239ff3aac06517605b93ca041e72a 223 SUPERFAMILY SSF143548 22 141 3.01E-29 T 26-04-2016 IPR029009 Allosteric substrate binding domain smi_1979 c5f239ff3aac06517605b93ca041e72a 223 Pfam PF03315 Serine dehydratase beta chain 8 78 1.1E-11 T 26-04-2016 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17|UniPathway: UPA00138 smi_1979 c5f239ff3aac06517605b93ca041e72a 223 PIRSF PIRSF036692 4 223 8.5E-107 T 26-04-2016 IPR004643 Iron-sulphur-dependent L-serine dehydratase beta subunit GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17|UniPathway: UPA00138 smi_1979 c5f239ff3aac06517605b93ca041e72a 223 Gene3D G3DSA:3.30.1330.90 16 138 2.5E-30 T 26-04-2016 IPR029009 Allosteric substrate binding domain smi_1979 c5f239ff3aac06517605b93ca041e72a 223 TIGRFAM TIGR00719 sda_beta: L-serine dehydratase, iron-sulfur-dependent, beta subunit 6 207 7.5E-69 T 26-04-2016 IPR004643 Iron-sulphur-dependent L-serine dehydratase beta subunit GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17|UniPathway: UPA00138 smi_0585 ae2bb6a5f3b2d65d43eb7aefa4177182 237 PIRSF PIRSF005426 1 236 2.0E-76 T 26-04-2016 IPR016446 Flavin oxidoreductase Frp family GO:0016491|GO:0055114 smi_0585 ae2bb6a5f3b2d65d43eb7aefa4177182 237 PANTHER PTHR23026 1 188 2.0E-74 T 26-04-2016 smi_0585 ae2bb6a5f3b2d65d43eb7aefa4177182 237 SUPERFAMILY SSF55469 1 234 4.06E-58 T 26-04-2016 IPR000415 Nitroreductase-like GO:0016491 smi_0585 ae2bb6a5f3b2d65d43eb7aefa4177182 237 Gene3D G3DSA:3.40.109.10 2 236 5.6E-65 T 26-04-2016 IPR000415 Nitroreductase-like GO:0016491 smi_0585 ae2bb6a5f3b2d65d43eb7aefa4177182 237 Pfam PF00881 Nitroreductase family 10 161 2.8E-21 T 26-04-2016 IPR029479 Nitroreductase smi_0585 ae2bb6a5f3b2d65d43eb7aefa4177182 237 PANTHER PTHR23026:SF98 1 188 2.0E-74 T 26-04-2016 smi_0422 46cf2a7ba2f476a6290c52829d16ea3e 469 Pfam PF04851 Type III restriction enzyme, res subunit 96 136 5.4E-10 T 26-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 smi_0422 46cf2a7ba2f476a6290c52829d16ea3e 469 Pfam PF04851 Type III restriction enzyme, res subunit 3 75 1.8E-10 T 26-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 smi_0422 46cf2a7ba2f476a6290c52829d16ea3e 469 SUPERFAMILY SSF52540 52 318 4.3E-42 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0422 46cf2a7ba2f476a6290c52829d16ea3e 469 Pfam PF00271 Helicase conserved C-terminal domain 212 307 1.3E-16 T 26-04-2016 IPR001650 Helicase, C-terminal smi_0422 46cf2a7ba2f476a6290c52829d16ea3e 469 PANTHER PTHR24031 213 324 3.6E-28 T 26-04-2016 smi_0422 46cf2a7ba2f476a6290c52829d16ea3e 469 PANTHER PTHR24031 5 177 3.6E-28 T 26-04-2016 smi_0422 46cf2a7ba2f476a6290c52829d16ea3e 469 Gene3D G3DSA:3.40.50.300 206 321 4.5E-26 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0422 46cf2a7ba2f476a6290c52829d16ea3e 469 SMART SM00487 1 168 9.7E-14 T 26-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain smi_0422 46cf2a7ba2f476a6290c52829d16ea3e 469 SMART SM00490 230 311 2.1E-15 T 26-04-2016 IPR001650 Helicase, C-terminal smi_0422 46cf2a7ba2f476a6290c52829d16ea3e 469 Gene3D G3DSA:3.40.50.300 3 139 2.8E-21 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0422 46cf2a7ba2f476a6290c52829d16ea3e 469 PANTHER PTHR24031:SF311 213 324 3.6E-28 T 26-04-2016 smi_0422 46cf2a7ba2f476a6290c52829d16ea3e 469 PANTHER PTHR24031:SF311 5 177 3.6E-28 T 26-04-2016 smi_1431 6d3bc2359dfe96bd68085a835cfff781 591 PANTHER PTHR18968 1 590 1.2E-302 T 26-04-2016 smi_1431 6d3bc2359dfe96bd68085a835cfff781 591 Gene3D G3DSA:3.40.50.1220 192 351 3.6E-39 T 26-04-2016 IPR029035 DHS-like NAD/FAD-binding domain smi_1431 6d3bc2359dfe96bd68085a835cfff781 591 Gene3D G3DSA:3.40.50.970 3 174 2.2E-50 T 26-04-2016 IPR029061 Thiamin diphosphate-binding fold smi_1431 6d3bc2359dfe96bd68085a835cfff781 591 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 196 326 3.2E-25 T 26-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 smi_1431 6d3bc2359dfe96bd68085a835cfff781 591 PANTHER PTHR18968:SF124 1 590 1.2E-302 T 26-04-2016 smi_1431 6d3bc2359dfe96bd68085a835cfff781 591 Gene3D G3DSA:3.40.50.970 360 541 2.7E-48 T 26-04-2016 IPR029061 Thiamin diphosphate-binding fold smi_1431 6d3bc2359dfe96bd68085a835cfff781 591 SUPERFAMILY SSF52518 365 584 7.86E-53 T 26-04-2016 IPR029061 Thiamin diphosphate-binding fold smi_1431 6d3bc2359dfe96bd68085a835cfff781 591 SUPERFAMILY SSF52518 4 173 8.84E-43 T 26-04-2016 IPR029061 Thiamin diphosphate-binding fold smi_1431 6d3bc2359dfe96bd68085a835cfff781 591 SUPERFAMILY SSF52467 189 357 8.68E-39 T 26-04-2016 IPR029035 DHS-like NAD/FAD-binding domain smi_1431 6d3bc2359dfe96bd68085a835cfff781 591 TIGRFAM TIGR02720 pyruv_oxi_spxB: pyruvate oxidase 8 582 3.5E-301 T 26-04-2016 IPR014092 Pyruvate oxidase GO:0047112|GO:0055114 KEGG: 00620+1.2.3.3 smi_1431 6d3bc2359dfe96bd68085a835cfff781 591 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 387 535 1.0E-31 T 26-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 smi_1431 6d3bc2359dfe96bd68085a835cfff781 591 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 424 443 - T 26-04-2016 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 smi_1431 6d3bc2359dfe96bd68085a835cfff781 591 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 7 173 1.4E-40 T 26-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 smi_0894 278a24b46f91f0a4719dcd75a7606d74 352 PANTHER PTHR32196 1 347 1.2E-95 T 26-04-2016 smi_0894 278a24b46f91f0a4719dcd75a7606d74 352 Pfam PF02653 Branched-chain amino acid transport system / permease component 51 332 1.2E-37 T 26-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 smi_0894 278a24b46f91f0a4719dcd75a7606d74 352 PANTHER PTHR32196:SF30 1 347 1.2E-95 T 26-04-2016 smi_1598 34991d248e8fd863c2fc62acd1987999 737 Gene3D G3DSA:3.30.230.70 6 222 1.9E-82 T 26-04-2016 IPR027408 PNPase/RNase PH domain smi_1598 34991d248e8fd863c2fc62acd1987999 737 Gene3D G3DSA:3.30.230.70 314 546 3.7E-85 T 26-04-2016 IPR027408 PNPase/RNase PH domain smi_1598 34991d248e8fd863c2fc62acd1987999 737 SMART SM00316 623 693 3.0E-24 T 26-04-2016 IPR022967 RNA-binding domain, S1 smi_1598 34991d248e8fd863c2fc62acd1987999 737 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 2 696 29.208 T 26-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 smi_1598 34991d248e8fd863c2fc62acd1987999 737 Pfam PF01138 3' exoribonuclease family, domain 1 326 459 6.5E-14 T 26-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 smi_1598 34991d248e8fd863c2fc62acd1987999 737 Pfam PF01138 3' exoribonuclease family, domain 1 13 142 1.2E-20 T 26-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 smi_1598 34991d248e8fd863c2fc62acd1987999 737 PANTHER PTHR11252:SF0 1 718 0.0 T 26-04-2016 smi_1598 34991d248e8fd863c2fc62acd1987999 737 SUPERFAMILY SSF50249 616 697 3.43E-21 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold smi_1598 34991d248e8fd863c2fc62acd1987999 737 Gene3D G3DSA:2.40.50.140 624 696 2.0E-23 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold smi_1598 34991d248e8fd863c2fc62acd1987999 737 Pfam PF00575 S1 RNA binding domain 622 693 4.7E-18 T 26-04-2016 IPR003029 S1 domain GO:0003676 smi_1598 34991d248e8fd863c2fc62acd1987999 737 SUPERFAMILY SSF54211 7 142 3.29E-46 T 26-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold smi_1598 34991d248e8fd863c2fc62acd1987999 737 SUPERFAMILY SSF54791 559 643 1.39E-21 T 26-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 smi_1598 34991d248e8fd863c2fc62acd1987999 737 SMART SM00322 555 620 2.2E-12 T 26-04-2016 IPR004087 K Homology domain GO:0003676 smi_1598 34991d248e8fd863c2fc62acd1987999 737 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 10 694 1.4E-299 T 26-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 smi_1598 34991d248e8fd863c2fc62acd1987999 737 Pfam PF03725 3' exoribonuclease family, domain 2 462 532 1.6E-7 T 26-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 smi_1598 34991d248e8fd863c2fc62acd1987999 737 Pfam PF03725 3' exoribonuclease family, domain 2 145 208 3.8E-14 T 26-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 smi_1598 34991d248e8fd863c2fc62acd1987999 737 PIRSF PIRSF005499 1 726 7.6E-286 T 26-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 smi_1598 34991d248e8fd863c2fc62acd1987999 737 SUPERFAMILY SSF46915 236 323 8.63E-14 T 26-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 smi_1598 34991d248e8fd863c2fc62acd1987999 737 PANTHER PTHR11252 1 718 0.0 T 26-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 smi_1598 34991d248e8fd863c2fc62acd1987999 737 SUPERFAMILY SSF54211 297 490 2.94E-43 T 26-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold smi_1598 34991d248e8fd863c2fc62acd1987999 737 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 240 323 7.7E-12 T 26-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 smi_1598 34991d248e8fd863c2fc62acd1987999 737 SUPERFAMILY SSF55666 143 233 1.44E-28 T 26-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 smi_1598 34991d248e8fd863c2fc62acd1987999 737 Pfam PF00013 KH domain 560 615 2.2E-10 T 26-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 smi_1598 34991d248e8fd863c2fc62acd1987999 737 SUPERFAMILY SSF55666 453 551 5.76E-29 T 26-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 smi_1598 34991d248e8fd863c2fc62acd1987999 737 Gene3D G3DSA:1.10.10.400 228 313 1.2E-35 T 26-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 smi_1598 34991d248e8fd863c2fc62acd1987999 737 Gene3D G3DSA:3.30.1370.10 554 623 5.5E-23 T 26-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 smi_0112 dd7b50c94c9839f26f9a6ed094362f29 310 Pfam PF02779 Transketolase, pyrimidine binding domain 8 164 5.3E-20 T 26-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain smi_0112 dd7b50c94c9839f26f9a6ed094362f29 310 PANTHER PTHR11624:SF2 9 310 4.6E-85 T 26-04-2016 smi_0112 dd7b50c94c9839f26f9a6ed094362f29 310 Gene3D G3DSA:3.40.50.970 5 182 1.9E-38 T 26-04-2016 IPR029061 Thiamin diphosphate-binding fold smi_0112 dd7b50c94c9839f26f9a6ed094362f29 310 SUPERFAMILY SSF52922 173 308 3.66E-26 T 26-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 smi_0112 dd7b50c94c9839f26f9a6ed094362f29 310 Pfam PF02780 Transketolase, C-terminal domain 186 299 2.8E-20 T 26-04-2016 IPR033248 Transketolase, C-terminal domain smi_0112 dd7b50c94c9839f26f9a6ed094362f29 310 SMART SM00861 6 172 4.0E-23 T 26-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain smi_0112 dd7b50c94c9839f26f9a6ed094362f29 310 Gene3D G3DSA:3.40.50.920 186 306 1.0E-25 T 26-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 smi_0112 dd7b50c94c9839f26f9a6ed094362f29 310 SUPERFAMILY SSF52518 4 167 3.91E-37 T 26-04-2016 IPR029061 Thiamin diphosphate-binding fold smi_0112 dd7b50c94c9839f26f9a6ed094362f29 310 PANTHER PTHR11624 9 310 4.6E-85 T 26-04-2016 IPR033247 Transketolase family smi_1109 41bef158f23332cc7db5c5e1ea3ee22b 402 SUPERFAMILY SSF103473 17 397 1.7E-31 T 26-04-2016 IPR020846 Major facilitator superfamily domain smi_1109 41bef158f23332cc7db5c5e1ea3ee22b 402 PANTHER PTHR23513:SF2 11 397 3.8E-52 T 26-04-2016 smi_1109 41bef158f23332cc7db5c5e1ea3ee22b 402 PANTHER PTHR23513 11 397 3.8E-52 T 26-04-2016 smi_1109 41bef158f23332cc7db5c5e1ea3ee22b 402 Gene3D G3DSA:1.20.1250.20 217 394 1.8E-11 T 26-04-2016 smi_1109 41bef158f23332cc7db5c5e1ea3ee22b 402 Gene3D G3DSA:1.20.1250.20 12 187 5.1E-9 T 26-04-2016 smi_1109 41bef158f23332cc7db5c5e1ea3ee22b 402 Pfam PF07690 Major Facilitator Superfamily 23 352 2.9E-11 T 26-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 smi_0398 dcfe452fc37e350ba45630439aa7a78d 381 SUPERFAMILY SSF103473 100 357 2.62E-5 T 26-04-2016 IPR020846 Major facilitator superfamily domain smi_0398 dcfe452fc37e350ba45630439aa7a78d 381 Pfam PF02687 FtsX-like permease family 256 372 1.3E-8 T 26-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 smi_0398 dcfe452fc37e350ba45630439aa7a78d 381 Pfam PF02687 FtsX-like permease family 65 177 4.5E-11 T 26-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 smi_1341 4153f9e9596f974454dee1785cbc5e80 397 Gene3D G3DSA:1.10.150.130 71 163 3.1E-8 T 26-04-2016 IPR023109 Integrase/recombinase, N-terminal smi_1341 4153f9e9596f974454dee1785cbc5e80 397 PANTHER PTHR30349:SF35 77 380 7.4E-155 T 26-04-2016 smi_1341 4153f9e9596f974454dee1785cbc5e80 397 Pfam PF14657 AP2-like DNA-binding integrase domain 13 50 3.3E-8 T 26-04-2016 IPR028259 AP2-like integrase, N-terminal domain smi_1341 4153f9e9596f974454dee1785cbc5e80 397 SUPERFAMILY SSF56349 70 360 2.24E-60 T 26-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 smi_1341 4153f9e9596f974454dee1785cbc5e80 397 Gene3D G3DSA:1.10.443.10 170 357 2.9E-38 T 26-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 smi_1341 4153f9e9596f974454dee1785cbc5e80 397 Pfam PF14659 Phage integrase, N-terminal SAM-like domain 70 121 7.3E-10 T 26-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 smi_1341 4153f9e9596f974454dee1785cbc5e80 397 Pfam PF00589 Phage integrase family 172 351 6.9E-23 T 26-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 smi_1341 4153f9e9596f974454dee1785cbc5e80 397 PANTHER PTHR30349 77 380 7.4E-155 T 26-04-2016 smi_0279 e83da1c50ee58b36911d22c855c470c5 316 Gene3D G3DSA:3.20.20.20 9 302 4.0E-94 T 26-04-2016 IPR000489 Pterin-binding domain GO:0042558 smi_0279 e83da1c50ee58b36911d22c855c470c5 316 Pfam PF00809 Pterin binding enzyme 13 286 7.9E-93 T 26-04-2016 IPR000489 Pterin-binding domain GO:0042558 smi_0279 e83da1c50ee58b36911d22c855c470c5 316 PANTHER PTHR20941:SF1 171 306 9.2E-100 T 26-04-2016 smi_0279 e83da1c50ee58b36911d22c855c470c5 316 PANTHER PTHR20941:SF1 8 150 9.2E-100 T 26-04-2016 smi_0279 e83da1c50ee58b36911d22c855c470c5 316 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 46 59 - T 26-04-2016 IPR000489 Pterin-binding domain GO:0042558 smi_0279 e83da1c50ee58b36911d22c855c470c5 316 SUPERFAMILY SSF51717 10 301 2.35E-78 T 26-04-2016 IPR011005 Dihydropteroate synthase-like GO:0044237 smi_0279 e83da1c50ee58b36911d22c855c470c5 316 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 12 27 - T 26-04-2016 IPR000489 Pterin-binding domain GO:0042558 smi_0279 e83da1c50ee58b36911d22c855c470c5 316 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 12 300 8.5E-76 T 26-04-2016 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614|UniPathway: UPA00077 smi_0279 e83da1c50ee58b36911d22c855c470c5 316 PANTHER PTHR20941 171 306 9.2E-100 T 26-04-2016 smi_0279 e83da1c50ee58b36911d22c855c470c5 316 PANTHER PTHR20941 8 150 9.2E-100 T 26-04-2016 smi_1520 d1967d68c625cce283c382d9b0b083c6 466 Gene3D G3DSA:2.40.100.10 277 464 1.5E-66 T 26-04-2016 IPR029000 Cyclophilin-like domain smi_1520 d1967d68c625cce283c382d9b0b083c6 466 PANTHER PTHR11071 211 386 1.5E-96 T 26-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 smi_1520 d1967d68c625cce283c382d9b0b083c6 466 PANTHER PTHR11071 411 464 1.5E-96 T 26-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 smi_1520 d1967d68c625cce283c382d9b0b083c6 466 Pfam PF08282 haloacid dehalogenase-like hydrolase 15 261 5.4E-55 T 26-04-2016 IPR023214 HAD-like domain smi_1520 d1967d68c625cce283c382d9b0b083c6 466 ProSitePatterns PS01229 Hypothetical cof family signature 2. 215 237 - T 26-04-2016 smi_1520 d1967d68c625cce283c382d9b0b083c6 466 SUPERFAMILY SSF56784 6 264 3.64E-64 T 26-04-2016 IPR023214 HAD-like domain smi_1520 d1967d68c625cce283c382d9b0b083c6 466 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 286 463 1.4E-46 T 26-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 smi_1520 d1967d68c625cce283c382d9b0b083c6 466 SUPERFAMILY SSF50891 279 385 4.53E-57 T 26-04-2016 IPR029000 Cyclophilin-like domain smi_1520 d1967d68c625cce283c382d9b0b083c6 466 SUPERFAMILY SSF50891 413 463 4.53E-57 T 26-04-2016 IPR029000 Cyclophilin-like domain smi_1520 d1967d68c625cce283c382d9b0b083c6 466 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 14 261 6.7E-53 T 26-04-2016 IPR000150 Cof protein GO:0016787 smi_1520 d1967d68c625cce283c382d9b0b083c6 466 PANTHER PTHR11071:SF282 211 386 1.5E-96 T 26-04-2016 smi_1520 d1967d68c625cce283c382d9b0b083c6 466 PANTHER PTHR11071:SF282 411 464 1.5E-96 T 26-04-2016 smi_1520 d1967d68c625cce283c382d9b0b083c6 466 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 14 234 9.9E-22 T 26-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 smi_1520 d1967d68c625cce283c382d9b0b083c6 466 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 367 382 7.4E-19 T 26-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 smi_1520 d1967d68c625cce283c382d9b0b083c6 466 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 325 337 7.4E-19 T 26-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 smi_1520 d1967d68c625cce283c382d9b0b083c6 466 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 299 314 7.4E-19 T 26-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 smi_1520 d1967d68c625cce283c382d9b0b083c6 466 Gene3D G3DSA:3.40.50.1000 8 82 1.3E-48 T 26-04-2016 IPR023214 HAD-like domain smi_1520 d1967d68c625cce283c382d9b0b083c6 466 Gene3D G3DSA:3.40.50.1000 170 266 1.3E-48 T 26-04-2016 IPR023214 HAD-like domain smi_1284 041168ec9cf833954ebcebfe83e9d072 574 PANTHER PTHR23344 72 554 3.6E-92 T 26-04-2016 IPR004129 Glycerophosphoryl diester phosphodiesterase GO:0008889 smi_1284 041168ec9cf833954ebcebfe83e9d072 574 SUPERFAMILY SSF51695 335 554 3.92E-48 T 26-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 smi_1284 041168ec9cf833954ebcebfe83e9d072 574 PANTHER PTHR23344:SF23 72 554 3.6E-92 T 26-04-2016 smi_1284 041168ec9cf833954ebcebfe83e9d072 574 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 341 555 1.3E-19 T 26-04-2016 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 smi_1284 041168ec9cf833954ebcebfe83e9d072 574 Pfam PF10110 Membrane domain of glycerophosphoryl diester phosphodiesterase 10 312 1.4E-75 T 26-04-2016 IPR018476 Glycerophosphoryl diester phosphodiesterase, membrane domain smi_1284 041168ec9cf833954ebcebfe83e9d072 574 Gene3D G3DSA:3.20.20.190 316 554 3.6E-48 T 26-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 smi_0360 094e00cbb4ee1620fcf855752fe4f156 136 SUPERFAMILY SSF54197 1 135 4.02E-43 T 26-04-2016 IPR011146 HIT-like domain GO:0003824 smi_0360 094e00cbb4ee1620fcf855752fe4f156 136 Pfam PF01230 HIT domain 12 107 1.5E-26 T 26-04-2016 IPR001310 Histidine triad (HIT) protein smi_0360 094e00cbb4ee1620fcf855752fe4f156 136 ProSitePatterns PS00892 HIT domain signature. 86 104 - T 26-04-2016 IPR019808 Histidine triad, conserved site smi_0360 094e00cbb4ee1620fcf855752fe4f156 136 Gene3D G3DSA:3.30.428.10 3 134 4.2E-43 T 26-04-2016 IPR011146 HIT-like domain GO:0003824 smi_0360 094e00cbb4ee1620fcf855752fe4f156 136 PRINTS PR00332 Histidine triad family signature 93 103 1.0E-18 T 26-04-2016 IPR001310 Histidine triad (HIT) protein smi_0360 094e00cbb4ee1620fcf855752fe4f156 136 PRINTS PR00332 Histidine triad family signature 26 44 1.0E-18 T 26-04-2016 IPR001310 Histidine triad (HIT) protein smi_0360 094e00cbb4ee1620fcf855752fe4f156 136 PRINTS PR00332 Histidine triad family signature 5 21 1.0E-18 T 26-04-2016 IPR001310 Histidine triad (HIT) protein smi_0360 094e00cbb4ee1620fcf855752fe4f156 136 PANTHER PTHR23089 1 111 2.6E-68 T 26-04-2016 IPR001310 Histidine triad (HIT) protein smi_0360 094e00cbb4ee1620fcf855752fe4f156 136 PANTHER PTHR23089:SF14 1 111 2.6E-68 T 26-04-2016 smi_1669 9f7144505e9a09df6f9e38cf55f6a27a 186 PANTHER PTHR30053 1 186 3.2E-75 T 26-04-2016 smi_1669 9f7144505e9a09df6f9e38cf55f6a27a 186 Gene3D G3DSA:2.30.30.30 1 64 5.7E-22 T 26-04-2016 IPR014722 Ribosomal protein L2 domain 2 smi_1669 9f7144505e9a09df6f9e38cf55f6a27a 186 Gene3D G3DSA:2.40.50.140 66 128 5.9E-20 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold smi_1669 9f7144505e9a09df6f9e38cf55f6a27a 186 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 3 61 4.7E-22 T 26-04-2016 IPR013185 Translation elongation factor, KOW-like UniPathway: UPA00345 smi_1669 9f7144505e9a09df6f9e38cf55f6a27a 186 TIGRFAM TIGR00038 efp: translation elongation factor P 2 186 9.5E-65 T 26-04-2016 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 UniPathway: UPA00345 smi_1669 9f7144505e9a09df6f9e38cf55f6a27a 186 Pfam PF09285 Elongation factor P, C-terminal 130 185 6.7E-23 T 26-04-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 smi_1669 9f7144505e9a09df6f9e38cf55f6a27a 186 Pfam PF01132 Elongation factor P (EF-P) OB domain 70 122 5.5E-15 T 26-04-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 smi_1669 9f7144505e9a09df6f9e38cf55f6a27a 186 SMART SM01185 68 122 3.1E-18 T 26-04-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 smi_1669 9f7144505e9a09df6f9e38cf55f6a27a 186 Hamap MF_00141 Elongation factor P [efp]. 1 186 46.849 T 26-04-2016 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 UniPathway: UPA00345 smi_1669 9f7144505e9a09df6f9e38cf55f6a27a 186 SUPERFAMILY SSF50249 129 186 8.4E-17 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold smi_1669 9f7144505e9a09df6f9e38cf55f6a27a 186 SMART SM00841 130 185 3.8E-30 T 26-04-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 smi_1669 9f7144505e9a09df6f9e38cf55f6a27a 186 SUPERFAMILY SSF50104 1 64 1.93E-16 T 26-04-2016 IPR008991 Translation protein SH3-like domain smi_1669 9f7144505e9a09df6f9e38cf55f6a27a 186 ProSitePatterns PS01275 Elongation factor P signature. 151 170 - T 26-04-2016 IPR013852 Translation elongation factor P/YeiP, conserved site UniPathway: UPA00345 smi_1669 9f7144505e9a09df6f9e38cf55f6a27a 186 SUPERFAMILY SSF50249 65 127 4.28E-15 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold smi_1669 9f7144505e9a09df6f9e38cf55f6a27a 186 PIRSF PIRSF005901 1 186 1.1E-60 T 26-04-2016 IPR020599 Translation elongation factor P/YeiP UniPathway: UPA00345 smi_1669 9f7144505e9a09df6f9e38cf55f6a27a 186 Gene3D G3DSA:2.40.50.140 129 186 7.1E-25 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold smi_1780 08b5dcc912cdceb44c3a7a3139613fc9 402 SUPERFAMILY SSF52540 2 204 6.5E-16 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1780 08b5dcc912cdceb44c3a7a3139613fc9 402 Gene3D G3DSA:3.40.50.300 2 144 5.2E-11 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1780 08b5dcc912cdceb44c3a7a3139613fc9 402 Pfam PF13173 AAA domain 22 151 7.0E-36 T 26-04-2016 smi_1780 08b5dcc912cdceb44c3a7a3139613fc9 402 Pfam PF13635 Domain of unknown function (DUF4143) 236 347 2.4E-8 T 26-04-2016 IPR025420 Domain of unknown function DUF4143 smi_1780 08b5dcc912cdceb44c3a7a3139613fc9 402 PANTHER PTHR33295 4 401 7.7E-107 T 26-04-2016 smi_1780 08b5dcc912cdceb44c3a7a3139613fc9 402 PANTHER PTHR33295:SF8 4 401 7.7E-107 T 26-04-2016 smi_2052 86308bd9c684aace74b2aeb459118b48 88 PIRSF PIRSF037257 1 88 3.5E-28 T 26-04-2016 IPR009366 Protein Veg GO:0042710 smi_2052 86308bd9c684aace74b2aeb459118b48 88 PANTHER PTHR40026:SF1 6 88 8.8E-31 T 26-04-2016 IPR009366 Protein Veg GO:0042710 smi_2052 86308bd9c684aace74b2aeb459118b48 88 Pfam PF06257 Biofilm formation stimulator VEG 10 84 3.7E-25 T 26-04-2016 IPR009366 Protein Veg GO:0042710 smi_2052 86308bd9c684aace74b2aeb459118b48 88 PANTHER PTHR40026 6 88 8.8E-31 T 26-04-2016 smi_2052 86308bd9c684aace74b2aeb459118b48 88 Gene3D G3DSA:2.30.30.100 1 88 3.4E-31 T 26-04-2016 smi_0776 ed5d988969196bcbc3008c36c24f32fe 574 Pfam PF00664 ABC transporter transmembrane region 16 283 4.2E-40 T 26-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 smi_0776 ed5d988969196bcbc3008c36c24f32fe 574 SUPERFAMILY SSF52540 328 569 5.99E-72 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0776 ed5d988969196bcbc3008c36c24f32fe 574 Gene3D G3DSA:1.20.1560.10 1 315 6.3E-60 T 26-04-2016 smi_0776 ed5d988969196bcbc3008c36c24f32fe 574 PANTHER PTHR24221 1 569 5.9E-151 T 26-04-2016 smi_0776 ed5d988969196bcbc3008c36c24f32fe 574 SMART SM00382 358 545 3.2E-14 T 26-04-2016 IPR003593 AAA+ ATPase domain smi_0776 ed5d988969196bcbc3008c36c24f32fe 574 PANTHER PTHR24221:SF190 1 569 5.9E-151 T 26-04-2016 smi_0776 ed5d988969196bcbc3008c36c24f32fe 574 SUPERFAMILY SSF90123 2 315 3.14E-63 T 26-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 smi_0776 ed5d988969196bcbc3008c36c24f32fe 574 ProSitePatterns PS00211 ABC transporters family signature. 471 485 - T 26-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 smi_0776 ed5d988969196bcbc3008c36c24f32fe 574 Pfam PF00005 ABC transporter 349 499 1.8E-30 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 smi_0776 ed5d988969196bcbc3008c36c24f32fe 574 Gene3D G3DSA:3.40.50.300 331 563 8.9E-66 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0132 7e71a493a8174f774cebbb84a4b801ab 430 SUPERFAMILY SSF160964 81 87 2.22E-8 T 26-04-2016 smi_0132 7e71a493a8174f774cebbb84a4b801ab 430 SUPERFAMILY SSF160964 118 173 2.22E-8 T 26-04-2016 smi_0132 7e71a493a8174f774cebbb84a4b801ab 430 PANTHER PTHR30193:SF17 97 430 3.1E-218 T 26-04-2016 smi_0132 7e71a493a8174f774cebbb84a4b801ab 430 SUPERFAMILY SSF161098 170 415 3.79E-47 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 smi_0132 7e71a493a8174f774cebbb84a4b801ab 430 PANTHER PTHR30193 97 430 3.1E-218 T 26-04-2016 smi_0132 7e71a493a8174f774cebbb84a4b801ab 430 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 205 426 4.3E-28 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 smi_0132 7e71a493a8174f774cebbb84a4b801ab 430 Gene3D G3DSA:1.10.3720.10 121 417 8.0E-58 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 smi_0580 81c39dfe40dc6abdb806789dc3baf10f 231 Gene3D G3DSA:3.40.50.300 3 224 8.4E-55 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0580 81c39dfe40dc6abdb806789dc3baf10f 231 PANTHER PTHR24220 5 226 2.9E-84 T 26-04-2016 smi_0580 81c39dfe40dc6abdb806789dc3baf10f 231 SUPERFAMILY SSF52540 3 214 2.02E-51 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0580 81c39dfe40dc6abdb806789dc3baf10f 231 Pfam PF00005 ABC transporter 19 154 1.0E-26 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 smi_0580 81c39dfe40dc6abdb806789dc3baf10f 231 SMART SM00382 28 203 5.7E-11 T 26-04-2016 IPR003593 AAA+ ATPase domain smi_0580 81c39dfe40dc6abdb806789dc3baf10f 231 PANTHER PTHR24220:SF530 5 226 2.9E-84 T 26-04-2016 smi_0214 faf0f0cdddfdc025eaf76bcf413fe602 377 Pfam PF00871 Acetokinase family 3 369 3.9E-139 T 26-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 smi_0214 faf0f0cdddfdc025eaf76bcf413fe602 377 PRINTS PR00471 Acetate kinase family signature 182 203 2.2E-38 T 26-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 smi_0214 faf0f0cdddfdc025eaf76bcf413fe602 377 PRINTS PR00471 Acetate kinase family signature 356 368 2.2E-38 T 26-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 smi_0214 faf0f0cdddfdc025eaf76bcf413fe602 377 PRINTS PR00471 Acetate kinase family signature 152 165 2.2E-38 T 26-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 smi_0214 faf0f0cdddfdc025eaf76bcf413fe602 377 PRINTS PR00471 Acetate kinase family signature 281 294 2.2E-38 T 26-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 smi_0214 faf0f0cdddfdc025eaf76bcf413fe602 377 PRINTS PR00471 Acetate kinase family signature 303 319 2.2E-38 T 26-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 smi_0214 faf0f0cdddfdc025eaf76bcf413fe602 377 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 182 199 - T 26-04-2016 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 smi_0214 faf0f0cdddfdc025eaf76bcf413fe602 377 SUPERFAMILY SSF53067 2 174 1.94E-54 T 26-04-2016 smi_0214 faf0f0cdddfdc025eaf76bcf413fe602 377 PIRSF PIRSF000722 1 377 5.2E-138 T 26-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 smi_0214 faf0f0cdddfdc025eaf76bcf413fe602 377 PANTHER PTHR21060:SF11 1 374 1.1E-190 T 26-04-2016 smi_0214 faf0f0cdddfdc025eaf76bcf413fe602 377 SUPERFAMILY SSF53067 136 375 7.42E-84 T 26-04-2016 smi_0214 faf0f0cdddfdc025eaf76bcf413fe602 377 PANTHER PTHR21060 1 374 1.1E-190 T 26-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 smi_0214 faf0f0cdddfdc025eaf76bcf413fe602 377 Gene3D G3DSA:3.30.420.40 69 183 1.8E-8 T 26-04-2016 smi_0214 faf0f0cdddfdc025eaf76bcf413fe602 377 Gene3D G3DSA:3.30.420.40 184 374 3.1E-75 T 26-04-2016 smi_0214 faf0f0cdddfdc025eaf76bcf413fe602 377 Hamap MF_00020 Acetate kinase [ackA]. 1 377 171.634 T 26-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 smi_0214 faf0f0cdddfdc025eaf76bcf413fe602 377 TIGRFAM TIGR00016 ackA: acetate kinase 4 374 2.0E-146 T 26-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 smi_1446 a3ac1adad5aa352c6f9df420cf049e28 231 Hamap MF_01200_B Orotidine 5'-phosphate decarboxylase [pyrF]. 3 229 40.574 T 26-04-2016 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 smi_1446 a3ac1adad5aa352c6f9df420cf049e28 231 SMART SM00934 5 224 2.1E-98 T 26-04-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 smi_1446 a3ac1adad5aa352c6f9df420cf049e28 231 PANTHER PTHR32119 1 231 2.2E-115 T 26-04-2016 smi_1446 a3ac1adad5aa352c6f9df420cf049e28 231 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 58 71 - T 26-04-2016 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 smi_1446 a3ac1adad5aa352c6f9df420cf049e28 231 SUPERFAMILY SSF51366 2 230 3.53E-73 T 26-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 smi_1446 a3ac1adad5aa352c6f9df420cf049e28 231 PANTHER PTHR32119:SF2 1 231 2.2E-115 T 26-04-2016 smi_1446 a3ac1adad5aa352c6f9df420cf049e28 231 Gene3D G3DSA:3.20.20.70 2 228 3.2E-85 T 26-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 smi_1446 a3ac1adad5aa352c6f9df420cf049e28 231 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 7 223 6.5E-55 T 26-04-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 smi_1446 a3ac1adad5aa352c6f9df420cf049e28 231 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 6 225 1.6E-64 T 26-04-2016 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 smi_1131 42c0e85159e23be7d55bf2019c2750e2 457 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 7 457 34.16 T 26-04-2016 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 smi_1131 42c0e85159e23be7d55bf2019c2750e2 457 SUPERFAMILY SSF116878 128 227 9.94E-49 T 26-04-2016 smi_1131 42c0e85159e23be7d55bf2019c2750e2 457 SUPERFAMILY SSF116878 382 457 9.94E-49 T 26-04-2016 smi_1131 42c0e85159e23be7d55bf2019c2750e2 457 Gene3D G3DSA:3.30.1360.120 2 127 7.6E-45 T 26-04-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 smi_1131 42c0e85159e23be7d55bf2019c2750e2 457 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 226 368 1.4E-25 T 26-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 smi_1131 42c0e85159e23be7d55bf2019c2750e2 457 PANTHER PTHR11649:SF56 10 457 1.9E-161 T 26-04-2016 smi_1131 42c0e85159e23be7d55bf2019c2750e2 457 Pfam PF01926 50S ribosome-binding GTPase 227 338 5.4E-26 T 26-04-2016 IPR006073 GTP binding domain GO:0005525 smi_1131 42c0e85159e23be7d55bf2019c2750e2 457 SUPERFAMILY SSF52540 85 169 2.12E-44 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1131 42c0e85159e23be7d55bf2019c2750e2 457 SUPERFAMILY SSF52540 204 372 2.12E-44 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1131 42c0e85159e23be7d55bf2019c2750e2 457 Gene3D G3DSA:3.40.50.300 293 382 1.1E-11 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1131 42c0e85159e23be7d55bf2019c2750e2 457 Pfam PF10396 GTP-binding protein TrmE N-terminus 8 126 1.3E-39 T 26-04-2016 IPR018948 GTP-binding protein TrmE, N-terminal smi_1131 42c0e85159e23be7d55bf2019c2750e2 457 Gene3D G3DSA:3.40.50.300 226 254 2.8E-5 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1131 42c0e85159e23be7d55bf2019c2750e2 457 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 14 457 7.1E-130 T 26-04-2016 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 smi_1131 42c0e85159e23be7d55bf2019c2750e2 457 Gene3D G3DSA:1.20.120.430 255 278 3.4E-55 T 26-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 smi_1131 42c0e85159e23be7d55bf2019c2750e2 457 Gene3D G3DSA:1.20.120.430 387 457 3.4E-55 T 26-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 smi_1131 42c0e85159e23be7d55bf2019c2750e2 457 Gene3D G3DSA:1.20.120.430 128 188 3.4E-55 T 26-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 smi_1131 42c0e85159e23be7d55bf2019c2750e2 457 PANTHER PTHR11649 10 457 1.9E-161 T 26-04-2016 smi_1131 42c0e85159e23be7d55bf2019c2750e2 457 Pfam PF12631 MnmE helical domain 129 454 1.3E-56 T 26-04-2016 IPR025867 MnmE, helical domain smi_0320 a9b8d4a163272fe7d29d0d91801eae14 443 Gene3D G3DSA:3.10.580.10 203 350 7.1E-17 T 26-04-2016 smi_0320 a9b8d4a163272fe7d29d0d91801eae14 443 Gene3D G3DSA:3.30.465.10 351 434 3.1E-23 T 26-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 smi_0320 a9b8d4a163272fe7d29d0d91801eae14 443 SUPERFAMILY SSF56176 353 432 1.85E-16 T 26-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 smi_0320 a9b8d4a163272fe7d29d0d91801eae14 443 PANTHER PTHR22777:SF8 2 443 3.1E-201 T 26-04-2016 smi_0320 a9b8d4a163272fe7d29d0d91801eae14 443 SMART SM01091 352 435 7.5E-17 T 26-04-2016 IPR005170 Transporter-associated domain smi_0320 a9b8d4a163272fe7d29d0d91801eae14 443 SUPERFAMILY SSF54631 203 340 6.1E-29 T 26-04-2016 smi_0320 a9b8d4a163272fe7d29d0d91801eae14 443 Pfam PF01595 Domain of unknown function DUF21 15 200 1.5E-46 T 26-04-2016 IPR002550 Domain of unknown function DUF21 smi_0320 a9b8d4a163272fe7d29d0d91801eae14 443 Pfam PF03471 Transporter associated domain 353 433 3.8E-16 T 26-04-2016 IPR005170 Transporter-associated domain smi_0320 a9b8d4a163272fe7d29d0d91801eae14 443 PANTHER PTHR22777 2 443 3.1E-201 T 26-04-2016 smi_0320 a9b8d4a163272fe7d29d0d91801eae14 443 Pfam PF00571 CBS domain 289 337 4.1E-5 T 26-04-2016 IPR000644 CBS domain smi_0320 a9b8d4a163272fe7d29d0d91801eae14 443 Pfam PF00571 CBS domain 219 272 1.1E-4 T 26-04-2016 IPR000644 CBS domain smi_1824 8ec3553e5ea6010d2efadcb2f73d24b8 158 Gene3D G3DSA:3.30.70.260 1 79 6.1E-27 T 26-04-2016 smi_1824 8ec3553e5ea6010d2efadcb2f73d24b8 158 PANTHER PTHR30239 1 157 5.3E-77 T 26-04-2016 smi_1824 8ec3553e5ea6010d2efadcb2f73d24b8 158 Pfam PF01842 ACT domain 5 68 1.2E-14 T 26-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 smi_1824 8ec3553e5ea6010d2efadcb2f73d24b8 158 Pfam PF10369 Small subunit of acetolactate synthase 85 157 1.1E-24 T 26-04-2016 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 smi_1824 8ec3553e5ea6010d2efadcb2f73d24b8 158 SUPERFAMILY SSF55021 2 80 3.96E-18 T 26-04-2016 smi_1824 8ec3553e5ea6010d2efadcb2f73d24b8 158 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 1 77 6.0E-37 T 26-04-2016 smi_1824 8ec3553e5ea6010d2efadcb2f73d24b8 158 Gene3D G3DSA:3.30.70.1150 84 158 1.6E-26 T 26-04-2016 smi_1824 8ec3553e5ea6010d2efadcb2f73d24b8 158 SUPERFAMILY SSF55021 80 158 1.28E-21 T 26-04-2016 smi_1824 8ec3553e5ea6010d2efadcb2f73d24b8 158 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 1 157 1.2E-52 T 26-04-2016 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 smi_0634 b192c1d6da6cb0602992aa3d0519a8dc 309 PRINTS PR00691 Adhesin B signature 136 155 8.61E-106 T 26-04-2016 IPR006129 Adhesin B GO:0007155 smi_0634 b192c1d6da6cb0602992aa3d0519a8dc 309 PRINTS PR00691 Adhesin B signature 57 75 8.61E-106 T 26-04-2016 IPR006129 Adhesin B GO:0007155 smi_0634 b192c1d6da6cb0602992aa3d0519a8dc 309 PRINTS PR00691 Adhesin B signature 265 283 8.61E-106 T 26-04-2016 IPR006129 Adhesin B GO:0007155 smi_0634 b192c1d6da6cb0602992aa3d0519a8dc 309 PRINTS PR00691 Adhesin B signature 32 53 8.61E-106 T 26-04-2016 IPR006129 Adhesin B GO:0007155 smi_0634 b192c1d6da6cb0602992aa3d0519a8dc 309 PRINTS PR00691 Adhesin B signature 194 211 8.61E-106 T 26-04-2016 IPR006129 Adhesin B GO:0007155 smi_0634 b192c1d6da6cb0602992aa3d0519a8dc 309 PRINTS PR00691 Adhesin B signature 286 304 8.61E-106 T 26-04-2016 IPR006129 Adhesin B GO:0007155 smi_0634 b192c1d6da6cb0602992aa3d0519a8dc 309 PRINTS PR00691 Adhesin B signature 220 238 8.61E-106 T 26-04-2016 IPR006129 Adhesin B GO:0007155 smi_0634 b192c1d6da6cb0602992aa3d0519a8dc 309 PRINTS PR00691 Adhesin B signature 243 260 8.61E-106 T 26-04-2016 IPR006129 Adhesin B GO:0007155 smi_0634 b192c1d6da6cb0602992aa3d0519a8dc 309 PRINTS PR00691 Adhesin B signature 76 95 8.61E-106 T 26-04-2016 IPR006129 Adhesin B GO:0007155 smi_0634 b192c1d6da6cb0602992aa3d0519a8dc 309 Pfam PF01297 Zinc-uptake complex component A periplasmic 35 305 4.5E-78 T 26-04-2016 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 smi_0634 b192c1d6da6cb0602992aa3d0519a8dc 309 PANTHER PTHR30477:SF12 7 305 6.2E-145 T 26-04-2016 smi_0634 b192c1d6da6cb0602992aa3d0519a8dc 309 PANTHER PTHR30477 7 305 6.2E-145 T 26-04-2016 smi_0634 b192c1d6da6cb0602992aa3d0519a8dc 309 PRINTS PR00690 Adhesin family signature 247 265 3.03E-63 T 26-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 smi_0634 b192c1d6da6cb0602992aa3d0519a8dc 309 PRINTS PR00690 Adhesin family signature 63 76 3.03E-63 T 26-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 smi_0634 b192c1d6da6cb0602992aa3d0519a8dc 309 PRINTS PR00690 Adhesin family signature 194 215 3.03E-63 T 26-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 smi_0634 b192c1d6da6cb0602992aa3d0519a8dc 309 PRINTS PR00690 Adhesin family signature 273 292 3.03E-63 T 26-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 smi_0634 b192c1d6da6cb0602992aa3d0519a8dc 309 PRINTS PR00690 Adhesin family signature 76 93 3.03E-63 T 26-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 smi_0634 b192c1d6da6cb0602992aa3d0519a8dc 309 PRINTS PR00690 Adhesin family signature 32 50 3.03E-63 T 26-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 smi_0634 b192c1d6da6cb0602992aa3d0519a8dc 309 Gene3D G3DSA:3.40.50.1980 19 186 5.6E-54 T 26-04-2016 smi_0634 b192c1d6da6cb0602992aa3d0519a8dc 309 Gene3D G3DSA:3.40.50.1980 187 307 9.8E-44 T 26-04-2016 smi_0634 b192c1d6da6cb0602992aa3d0519a8dc 309 SUPERFAMILY SSF53807 15 307 1.67E-90 T 26-04-2016 smi_0373 c86f5eb8b7970c313f83cb3e73f8653c 264 Pfam PF01636 Phosphotransferase enzyme family 44 222 4.8E-16 T 26-04-2016 IPR002575 Aminoglycoside phosphotransferase smi_0373 c86f5eb8b7970c313f83cb3e73f8653c 264 SUPERFAMILY SSF56112 3 226 7.14E-32 T 26-04-2016 IPR011009 Protein kinase-like domain smi_0373 c86f5eb8b7970c313f83cb3e73f8653c 264 Gene3D G3DSA:3.90.1200.10 84 225 4.1E-13 T 26-04-2016 smi_0373 c86f5eb8b7970c313f83cb3e73f8653c 264 PANTHER PTHR40086 1 262 3.7E-78 T 26-04-2016 smi_1850 aaff7e2b953ffd43644a620aa8e94619 602 PANTHER PTHR10937:SF0 1 602 8.7E-278 T 26-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 smi_1850 aaff7e2b953ffd43644a620aa8e94619 602 PANTHER PTHR10937 1 602 8.7E-278 T 26-04-2016 smi_1850 aaff7e2b953ffd43644a620aa8e94619 602 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 602 1.9E-212 T 26-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 smi_1850 aaff7e2b953ffd43644a620aa8e94619 602 Gene3D G3DSA:3.60.20.10 2 238 3.5E-68 T 26-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal smi_1850 aaff7e2b953ffd43644a620aa8e94619 602 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 602 38.184 T 26-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 smi_1850 aaff7e2b953ffd43644a620aa8e94619 602 Gene3D G3DSA:3.40.50.10490 444 602 2.7E-55 T 26-04-2016 smi_1850 aaff7e2b953ffd43644a620aa8e94619 602 SUPERFAMILY SSF56235 2 232 1.97E-64 T 26-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal smi_1850 aaff7e2b953ffd43644a620aa8e94619 602 Gene3D G3DSA:3.40.50.10490 242 443 3.4E-53 T 26-04-2016 smi_1850 aaff7e2b953ffd43644a620aa8e94619 602 Pfam PF01380 SIS domain 289 413 9.0E-28 T 26-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 smi_1850 aaff7e2b953ffd43644a620aa8e94619 602 Pfam PF01380 SIS domain 461 584 1.5E-17 T 26-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 smi_1850 aaff7e2b953ffd43644a620aa8e94619 602 SUPERFAMILY SSF53697 245 602 1.09E-90 T 26-04-2016 smi_1850 aaff7e2b953ffd43644a620aa8e94619 602 Pfam PF13522 Glutamine amidotransferase domain 61 189 3.0E-21 T 26-04-2016 smi_0930 2baaeb223f23632c833bdb1a913d47f2 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 6.6E-17 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 smi_0930 2baaeb223f23632c833bdb1a913d47f2 302 Pfam PF03466 LysR substrate binding domain 99 295 3.2E-13 T 26-04-2016 IPR005119 LysR, substrate-binding smi_0930 2baaeb223f23632c833bdb1a913d47f2 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.6E-7 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 smi_0930 2baaeb223f23632c833bdb1a913d47f2 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.6E-7 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 smi_0930 2baaeb223f23632c833bdb1a913d47f2 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.6E-7 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 smi_0930 2baaeb223f23632c833bdb1a913d47f2 302 Gene3D G3DSA:1.10.10.10 1 80 3.5E-23 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain smi_0930 2baaeb223f23632c833bdb1a913d47f2 302 PANTHER PTHR30346 1 300 1.1E-43 T 26-04-2016 smi_0930 2baaeb223f23632c833bdb1a913d47f2 302 PANTHER PTHR30346:SF0 1 300 1.1E-43 T 26-04-2016 smi_0930 2baaeb223f23632c833bdb1a913d47f2 302 Gene3D G3DSA:3.40.190.10 98 203 4.8E-12 T 26-04-2016 smi_0930 2baaeb223f23632c833bdb1a913d47f2 302 SUPERFAMILY SSF53850 97 298 2.53E-15 T 26-04-2016 smi_0930 2baaeb223f23632c833bdb1a913d47f2 302 SUPERFAMILY SSF46785 1 84 4.96E-19 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain smi_1996 8aacac8d12c62cee8c06cc71d2229bae 626 PANTHER PTHR21040 1 597 0.0 T 26-04-2016 smi_1996 8aacac8d12c62cee8c06cc71d2229bae 626 SUPERFAMILY SSF51445 87 400 3.54E-43 T 26-04-2016 IPR017853 Glycoside hydrolase superfamily smi_1996 8aacac8d12c62cee8c06cc71d2229bae 626 PANTHER PTHR21040:SF7 1 597 0.0 T 26-04-2016 smi_1996 8aacac8d12c62cee8c06cc71d2229bae 626 Gene3D G3DSA:3.20.20.80 68 407 2.0E-27 T 26-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 smi_0708 15329cda7a1dd3cf83494cec465cdc4f 318 Pfam PF04055 Radical SAM superfamily 43 206 1.1E-14 T 26-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 smi_0708 15329cda7a1dd3cf83494cec465cdc4f 318 SMART SM00729 23 253 9.1E-31 T 26-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 smi_0708 15329cda7a1dd3cf83494cec465cdc4f 318 PANTHER PTHR11135:SF1 1 305 1.7E-152 T 26-04-2016 IPR005911 Protein YhcC-like GO:0051536 smi_0708 15329cda7a1dd3cf83494cec465cdc4f 318 Gene3D G3DSA:3.80.30.20 23 253 5.7E-29 T 26-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe smi_0708 15329cda7a1dd3cf83494cec465cdc4f 318 TIGRFAM TIGR01212 TIGR01212: radical SAM protein, TIGR01212 family 7 306 8.8E-104 T 26-04-2016 IPR005911 Protein YhcC-like GO:0051536 smi_0708 15329cda7a1dd3cf83494cec465cdc4f 318 SUPERFAMILY SSF102114 11 300 4.32E-46 T 26-04-2016 smi_0708 15329cda7a1dd3cf83494cec465cdc4f 318 PANTHER PTHR11135 1 305 1.7E-152 T 26-04-2016 smi_0708 15329cda7a1dd3cf83494cec465cdc4f 318 Pfam PF16199 Radical_SAM C-terminal domain 214 297 2.3E-25 T 26-04-2016 IPR032432 Radical SAM, C-terminal extension smi_1434 c0eb5c4cfaad2eecaf96a7f878e8b55f 131 Pfam PF03965 Penicillinase repressor 3 116 6.9E-33 T 26-04-2016 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 smi_1434 c0eb5c4cfaad2eecaf96a7f878e8b55f 131 Gene3D G3DSA:1.10.10.10 4 67 1.7E-27 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain smi_1434 c0eb5c4cfaad2eecaf96a7f878e8b55f 131 PIRSF PIRSF019455 1 128 1.8E-43 T 26-04-2016 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 smi_1434 c0eb5c4cfaad2eecaf96a7f878e8b55f 131 TIGRFAM TIGR02698 CopY_TcrY: copper transport repressor, CopY/TcrY family 2 131 1.9E-53 T 26-04-2016 IPR014071 Copper transport repressor CopY/TcrY smi_1434 c0eb5c4cfaad2eecaf96a7f878e8b55f 131 PANTHER PTHR34134 1 127 5.3E-36 T 26-04-2016 smi_1434 c0eb5c4cfaad2eecaf96a7f878e8b55f 131 SUPERFAMILY SSF46785 1 119 5.33E-28 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain smi_1434 c0eb5c4cfaad2eecaf96a7f878e8b55f 131 PANTHER PTHR34134:SF1 1 127 5.3E-36 T 26-04-2016 smi_0339 eca2c60bd705153645218c9ed426162a 240 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 98 112 - T 26-04-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 smi_0339 eca2c60bd705153645218c9ed426162a 240 Gene3D G3DSA:3.10.290.10 1 63 2.1E-27 T 26-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 smi_0339 eca2c60bd705153645218c9ed426162a 240 Pfam PF00849 RNA pseudouridylate synthase 61 195 1.5E-21 T 26-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 smi_0339 eca2c60bd705153645218c9ed426162a 240 SMART SM00363 1 64 9.3E-17 T 26-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 smi_0339 eca2c60bd705153645218c9ed426162a 240 SUPERFAMILY SSF55174 1 56 2.16E-16 T 26-04-2016 smi_0339 eca2c60bd705153645218c9ed426162a 240 SUPERFAMILY SSF55120 45 233 1.68E-45 T 26-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 smi_0339 eca2c60bd705153645218c9ed426162a 240 Pfam PF01479 S4 domain 1 47 4.6E-14 T 26-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 smi_0339 eca2c60bd705153645218c9ed426162a 240 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 65 225 6.0E-47 T 26-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 smi_0339 eca2c60bd705153645218c9ed426162a 240 PANTHER PTHR21600:SF2 1 240 1.3E-82 T 26-04-2016 smi_0339 eca2c60bd705153645218c9ed426162a 240 PANTHER PTHR21600 1 240 1.3E-82 T 26-04-2016 smi_0868 9a0fafa13ae90a80e0269b93c3aa3168 244 Gene3D G3DSA:3.40.50.300 4 241 2.4E-89 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0868 9a0fafa13ae90a80e0269b93c3aa3168 244 PIRSF PIRSF039085 2 244 3.1E-116 T 26-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 smi_0868 9a0fafa13ae90a80e0269b93c3aa3168 244 SMART SM00382 30 217 1.5E-15 T 26-04-2016 IPR003593 AAA+ ATPase domain smi_0868 9a0fafa13ae90a80e0269b93c3aa3168 244 Pfam PF00005 ABC transporter 21 169 2.2E-37 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 smi_0868 9a0fafa13ae90a80e0269b93c3aa3168 244 PANTHER PTHR24220 7 244 2.5E-142 T 26-04-2016 smi_0868 9a0fafa13ae90a80e0269b93c3aa3168 244 SUPERFAMILY SSF52540 5 239 1.1E-82 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0868 9a0fafa13ae90a80e0269b93c3aa3168 244 PANTHER PTHR24220:SF327 7 244 2.5E-142 T 26-04-2016 smi_0868 9a0fafa13ae90a80e0269b93c3aa3168 244 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 26-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 smi_0284 eeab444495f986cd1a9ac75db8e44ade 336 SMART SM00354 6 76 3.6E-38 T 26-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 smi_0284 eeab444495f986cd1a9ac75db8e44ade 336 Pfam PF13377 Periplasmic binding protein-like domain 181 332 4.2E-27 T 26-04-2016 smi_0284 eeab444495f986cd1a9ac75db8e44ade 336 Gene3D G3DSA:1.10.260.40 7 58 1.3E-27 T 26-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 smi_0284 eeab444495f986cd1a9ac75db8e44ade 336 ProSitePatterns PS00356 LacI-type HTH domain signature. 9 27 - T 26-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 smi_0284 eeab444495f986cd1a9ac75db8e44ade 336 Pfam PF00356 Bacterial regulatory proteins, lacI family 8 53 7.2E-22 T 26-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 smi_0284 eeab444495f986cd1a9ac75db8e44ade 336 PANTHER PTHR30146 6 336 5.0E-132 T 26-04-2016 smi_0284 eeab444495f986cd1a9ac75db8e44ade 336 PANTHER PTHR30146:SF4 6 336 5.0E-132 T 26-04-2016 smi_0284 eeab444495f986cd1a9ac75db8e44ade 336 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 8 18 8.2E-7 T 26-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 smi_0284 eeab444495f986cd1a9ac75db8e44ade 336 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 18 28 8.2E-7 T 26-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 smi_0284 eeab444495f986cd1a9ac75db8e44ade 336 SUPERFAMILY SSF47413 6 64 1.31E-19 T 26-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 smi_0284 eeab444495f986cd1a9ac75db8e44ade 336 TIGRFAM TIGR01481 ccpA: catabolite control protein A 5 333 5.1E-173 T 26-04-2016 IPR006377 Catabolite control protein A GO:0006355 smi_0284 eeab444495f986cd1a9ac75db8e44ade 336 SUPERFAMILY SSF53822 66 333 2.17E-72 T 26-04-2016 IPR028082 Periplasmic binding protein-like I smi_0284 eeab444495f986cd1a9ac75db8e44ade 336 Gene3D G3DSA:3.40.50.2300 177 313 7.9E-37 T 26-04-2016 smi_0284 eeab444495f986cd1a9ac75db8e44ade 336 Gene3D G3DSA:3.40.50.2300 59 176 2.2E-44 T 26-04-2016 smi_1463 08ebf9580ae2d5204fc51e6f66f72a7c 920 PANTHER PTHR13779 650 908 2.9E-75 T 26-04-2016 smi_1463 08ebf9580ae2d5204fc51e6f66f72a7c 920 PRINTS PR00819 CbxX/CfqX superfamily signature 820 839 1.8E-49 T 26-04-2016 IPR000641 CbxX/CfqX GO:0005524 smi_1463 08ebf9580ae2d5204fc51e6f66f72a7c 920 PRINTS PR00819 CbxX/CfqX superfamily signature 660 674 1.8E-49 T 26-04-2016 IPR000641 CbxX/CfqX GO:0005524 smi_1463 08ebf9580ae2d5204fc51e6f66f72a7c 920 PRINTS PR00819 CbxX/CfqX superfamily signature 803 820 1.8E-49 T 26-04-2016 IPR000641 CbxX/CfqX GO:0005524 smi_1463 08ebf9580ae2d5204fc51e6f66f72a7c 920 PRINTS PR00819 CbxX/CfqX superfamily signature 738 752 1.8E-49 T 26-04-2016 IPR000641 CbxX/CfqX GO:0005524 smi_1463 08ebf9580ae2d5204fc51e6f66f72a7c 920 PRINTS PR00819 CbxX/CfqX superfamily signature 700 715 1.8E-49 T 26-04-2016 IPR000641 CbxX/CfqX GO:0005524 smi_1463 08ebf9580ae2d5204fc51e6f66f72a7c 920 PRINTS PR00819 CbxX/CfqX superfamily signature 875 887 1.8E-49 T 26-04-2016 IPR000641 CbxX/CfqX GO:0005524 smi_1463 08ebf9580ae2d5204fc51e6f66f72a7c 920 PRINTS PR00819 CbxX/CfqX superfamily signature 782 794 1.8E-49 T 26-04-2016 IPR000641 CbxX/CfqX GO:0005524 smi_1463 08ebf9580ae2d5204fc51e6f66f72a7c 920 PRINTS PR00819 CbxX/CfqX superfamily signature 752 771 1.8E-49 T 26-04-2016 IPR000641 CbxX/CfqX GO:0005524 smi_1463 08ebf9580ae2d5204fc51e6f66f72a7c 920 SUPERFAMILY SSF52540 660 919 1.16E-35 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1463 08ebf9580ae2d5204fc51e6f66f72a7c 920 SUPERFAMILY SSF52540 376 638 1.76E-31 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1463 08ebf9580ae2d5204fc51e6f66f72a7c 920 PANTHER PTHR13779:SF20 650 908 2.9E-75 T 26-04-2016 smi_1463 08ebf9580ae2d5204fc51e6f66f72a7c 920 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 702 813 1.2E-17 T 26-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 smi_1463 08ebf9580ae2d5204fc51e6f66f72a7c 920 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 426 558 3.7E-17 T 26-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 smi_1463 08ebf9580ae2d5204fc51e6f66f72a7c 920 Gene3D G3DSA:3.40.50.300 660 842 3.4E-26 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1463 08ebf9580ae2d5204fc51e6f66f72a7c 920 Gene3D G3DSA:3.40.50.300 378 575 1.0E-26 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1463 08ebf9580ae2d5204fc51e6f66f72a7c 920 SMART SM00382 421 563 6.4E-6 T 26-04-2016 IPR003593 AAA+ ATPase domain smi_1463 08ebf9580ae2d5204fc51e6f66f72a7c 920 SMART SM00382 697 846 2.3E-5 T 26-04-2016 IPR003593 AAA+ ATPase domain smi_0648 bc6be3f2220f1b68b8e07773d520e6d6 357 SUPERFAMILY SSF53474 74 228 2.2E-19 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold smi_0648 bc6be3f2220f1b68b8e07773d520e6d6 357 Gene3D G3DSA:3.40.50.1820 99 198 7.8E-12 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold smi_0648 bc6be3f2220f1b68b8e07773d520e6d6 357 Pfam PF11187 Protein of unknown function (DUF2974) 75 298 3.1E-87 T 26-04-2016 IPR024499 Protein of unknown function DUF2974 smi_0606 70a479f78dbf72822ed2d55ac8864fd1 150 Pfam PF04074 Domain of unknown function (DUF386) 1 147 5.2E-37 T 26-04-2016 IPR004375 YhcH/YjgK/YiaL family smi_0606 70a479f78dbf72822ed2d55ac8864fd1 150 TIGRFAM TIGR00022 TIGR00022: YhcH/YjgK/YiaL family protein 1 150 2.6E-30 T 26-04-2016 IPR004375 YhcH/YjgK/YiaL family smi_0606 70a479f78dbf72822ed2d55ac8864fd1 150 SUPERFAMILY SSF51197 1 149 6.32E-39 T 26-04-2016 smi_0606 70a479f78dbf72822ed2d55ac8864fd1 150 Gene3D G3DSA:2.60.120.370 1 149 2.1E-44 T 26-04-2016 IPR004375 YhcH/YjgK/YiaL family smi_0606 70a479f78dbf72822ed2d55ac8864fd1 150 PANTHER PTHR34986 2 150 7.6E-61 T 26-04-2016 smi_0606 70a479f78dbf72822ed2d55ac8864fd1 150 PANTHER PTHR34986:SF1 2 150 7.6E-61 T 26-04-2016 smi_1953 22349c95b4a24cdb984e957e691f5d98 227 SUPERFAMILY SSF53067 106 202 3.88E-10 T 26-04-2016 smi_1953 22349c95b4a24cdb984e957e691f5d98 227 SUPERFAMILY SSF53067 1 100 1.51E-26 T 26-04-2016 smi_1953 22349c95b4a24cdb984e957e691f5d98 227 Gene3D G3DSA:3.30.420.40 1 116 6.1E-38 T 26-04-2016 smi_1953 22349c95b4a24cdb984e957e691f5d98 227 PANTHER PTHR11735 1 126 4.9E-47 T 26-04-2016 smi_1953 22349c95b4a24cdb984e957e691f5d98 227 PANTHER PTHR11735:SF11 1 126 4.9E-47 T 26-04-2016 smi_1953 22349c95b4a24cdb984e957e691f5d98 227 Gene3D G3DSA:3.30.420.40 117 183 1.7E-4 T 26-04-2016 smi_1953 22349c95b4a24cdb984e957e691f5d98 227 Pfam PF00814 Glycoprotease family 24 164 1.4E-27 T 26-04-2016 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 smi_1953 22349c95b4a24cdb984e957e691f5d98 227 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 3 204 3.0E-53 T 26-04-2016 IPR022496 tRNA threonylcarbamoyl adenosine modification protein YeaZ GO:0002949 smi_0513 f8448d75838ba5e0f4bafa544ef65c5c 397 Pfam PF04932 O-Antigen ligase 196 324 7.1E-13 T 26-04-2016 IPR007016 O-antigen ligase-related smi_1381 04f02c1115db9d7e25dfd43f8461e955 247 SUPERFAMILY SSF52540 1 238 2.66E-75 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1381 04f02c1115db9d7e25dfd43f8461e955 247 PANTHER PTHR24220:SF327 3 239 8.0E-114 T 26-04-2016 smi_1381 04f02c1115db9d7e25dfd43f8461e955 247 Gene3D G3DSA:3.40.50.300 1 239 7.7E-83 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1381 04f02c1115db9d7e25dfd43f8461e955 247 Pfam PF00005 ABC transporter 17 168 3.9E-35 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 smi_1381 04f02c1115db9d7e25dfd43f8461e955 247 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 26-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 smi_1381 04f02c1115db9d7e25dfd43f8461e955 247 SMART SM00382 26 216 2.0E-16 T 26-04-2016 IPR003593 AAA+ ATPase domain smi_1381 04f02c1115db9d7e25dfd43f8461e955 247 PIRSF PIRSF039085 1 244 1.0E-96 T 26-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 smi_1381 04f02c1115db9d7e25dfd43f8461e955 247 PANTHER PTHR24220 3 239 8.0E-114 T 26-04-2016 smi_1589 78a417ec88086b51d4d54b4201c40d23 264 Gene3D G3DSA:3.40.190.10 116 218 3.8E-25 T 26-04-2016 smi_1589 78a417ec88086b51d4d54b4201c40d23 264 Gene3D G3DSA:3.40.190.10 219 255 6.8E-34 T 26-04-2016 smi_1589 78a417ec88086b51d4d54b4201c40d23 264 Gene3D G3DSA:3.40.190.10 34 115 6.8E-34 T 26-04-2016 smi_1589 78a417ec88086b51d4d54b4201c40d23 264 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 61 74 - T 26-04-2016 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 smi_1589 78a417ec88086b51d4d54b4201c40d23 264 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 38 254 6.5E-51 T 26-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF smi_1589 78a417ec88086b51d4d54b4201c40d23 264 PANTHER PTHR18966 33 253 1.9E-34 T 26-04-2016 smi_1589 78a417ec88086b51d4d54b4201c40d23 264 PANTHER PTHR18966:SF191 33 253 1.9E-34 T 26-04-2016 smi_1589 78a417ec88086b51d4d54b4201c40d23 264 SMART SM00062 37 258 3.4E-53 T 26-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF smi_1589 78a417ec88086b51d4d54b4201c40d23 264 SUPERFAMILY SSF53850 1 256 5.56E-60 T 26-04-2016 smi_1504 6d54488a115f1bfe2fb163a554ae0372 1032 SMART SM00487 579 760 8.9E-27 T 26-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain smi_1504 6d54488a115f1bfe2fb163a554ae0372 1032 SUPERFAMILY SSF52540 574 779 2.17E-49 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1504 6d54488a115f1bfe2fb163a554ae0372 1032 Gene3D G3DSA:3.40.50.300 858 1008 2.0E-26 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1504 6d54488a115f1bfe2fb163a554ae0372 1032 SUPERFAMILY SSF52540 781 1027 1.3E-66 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1504 6d54488a115f1bfe2fb163a554ae0372 1032 Pfam PF00271 Helicase conserved C-terminal domain 861 972 1.6E-20 T 26-04-2016 IPR001650 Helicase, C-terminal smi_1504 6d54488a115f1bfe2fb163a554ae0372 1032 Pfam PF00176 SNF2 family N-terminal domain 596 850 1.6E-43 T 26-04-2016 IPR000330 SNF2-related, N-terminal domain GO:0005524 smi_1504 6d54488a115f1bfe2fb163a554ae0372 1032 Pfam PF08455 Bacterial SNF2 helicase associated 212 572 3.6E-55 T 26-04-2016 IPR013663 Helicase, SWF/SNF/SWI type, bacterial smi_1504 6d54488a115f1bfe2fb163a554ae0372 1032 SMART SM00490 890 972 5.8E-25 T 26-04-2016 IPR001650 Helicase, C-terminal smi_1504 6d54488a115f1bfe2fb163a554ae0372 1032 PANTHER PTHR10799:SF651 570 1029 0.0 T 26-04-2016 smi_1504 6d54488a115f1bfe2fb163a554ae0372 1032 PANTHER PTHR10799:SF651 8 120 0.0 T 26-04-2016 smi_1504 6d54488a115f1bfe2fb163a554ae0372 1032 Gene3D G3DSA:3.40.50.300 578 746 1.5E-27 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1504 6d54488a115f1bfe2fb163a554ae0372 1032 PANTHER PTHR10799 570 1029 0.0 T 26-04-2016 smi_1504 6d54488a115f1bfe2fb163a554ae0372 1032 PANTHER PTHR10799 8 120 0.0 T 26-04-2016 smi_2074 e8a6f9202a56a5ba86778c4e7f198e07 365 PANTHER PTHR32182 1 360 8.3E-73 T 26-04-2016 smi_2074 e8a6f9202a56a5ba86778c4e7f198e07 365 Pfam PF13175 AAA ATPase domain 1 233 1.1E-15 T 26-04-2016 smi_2074 e8a6f9202a56a5ba86778c4e7f198e07 365 PANTHER PTHR32182:SF0 1 360 8.3E-73 T 26-04-2016 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 smi_2074 e8a6f9202a56a5ba86778c4e7f198e07 365 ProSitePatterns PS00617 RecF protein signature 1. 116 136 - T 26-04-2016 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 smi_2074 e8a6f9202a56a5ba86778c4e7f198e07 365 ProSitePatterns PS00618 RecF protein signature 2. 305 323 - T 26-04-2016 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 smi_2074 e8a6f9202a56a5ba86778c4e7f198e07 365 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 365 98.31 T 26-04-2016 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 smi_2074 e8a6f9202a56a5ba86778c4e7f198e07 365 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 1 358 6.3E-127 T 26-04-2016 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 smi_2074 e8a6f9202a56a5ba86778c4e7f198e07 365 SUPERFAMILY SSF52540 1 360 5.75E-40 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_2074 e8a6f9202a56a5ba86778c4e7f198e07 365 Gene3D G3DSA:3.40.50.300 1 166 4.0E-44 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_2074 e8a6f9202a56a5ba86778c4e7f198e07 365 Gene3D G3DSA:3.40.50.300 234 358 4.0E-44 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1159 3c346bb13190e1b9a0a72d4216dc59ad 434 Gene3D G3DSA:3.30.390.10 4 125 3.9E-57 T 26-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 smi_1159 3c346bb13190e1b9a0a72d4216dc59ad 434 PANTHER PTHR11902 1 431 5.9E-261 T 26-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 smi_1159 3c346bb13190e1b9a0a72d4216dc59ad 434 Hamap MF_00318 Enolase [eno]. 2 417 44.589 T 26-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 smi_1159 3c346bb13190e1b9a0a72d4216dc59ad 434 SUPERFAMILY SSF51604 139 432 1.36E-126 T 26-04-2016 IPR029065 Enolase C-terminal domain-like smi_1159 3c346bb13190e1b9a0a72d4216dc59ad 434 PRINTS PR00148 Enolase signature 317 328 7.26E-46 T 26-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 smi_1159 3c346bb13190e1b9a0a72d4216dc59ad 434 PRINTS PR00148 Enolase signature 37 51 7.26E-46 T 26-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 smi_1159 3c346bb13190e1b9a0a72d4216dc59ad 434 PRINTS PR00148 Enolase signature 369 386 7.26E-46 T 26-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 smi_1159 3c346bb13190e1b9a0a72d4216dc59ad 434 PRINTS PR00148 Enolase signature 161 174 7.26E-46 T 26-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 smi_1159 3c346bb13190e1b9a0a72d4216dc59ad 434 PRINTS PR00148 Enolase signature 340 354 7.26E-46 T 26-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 smi_1159 3c346bb13190e1b9a0a72d4216dc59ad 434 PRINTS PR00148 Enolase signature 107 123 7.26E-46 T 26-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 smi_1159 3c346bb13190e1b9a0a72d4216dc59ad 434 Gene3D G3DSA:3.20.20.120 128 430 3.0E-135 T 26-04-2016 IPR029065 Enolase C-terminal domain-like smi_1159 3c346bb13190e1b9a0a72d4216dc59ad 434 PIRSF PIRSF001400 1 431 3.1E-188 T 26-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 smi_1159 3c346bb13190e1b9a0a72d4216dc59ad 434 SUPERFAMILY SSF54826 3 138 2.8E-58 T 26-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 smi_1159 3c346bb13190e1b9a0a72d4216dc59ad 434 Pfam PF00113 Enolase, C-terminal TIM barrel domain 140 429 1.2E-127 T 26-04-2016 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 smi_1159 3c346bb13190e1b9a0a72d4216dc59ad 434 SMART SM01193 4 134 8.3E-96 T 26-04-2016 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 smi_1159 3c346bb13190e1b9a0a72d4216dc59ad 434 ProSitePatterns PS00164 Enolase signature. 340 353 - T 26-04-2016 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 smi_1159 3c346bb13190e1b9a0a72d4216dc59ad 434 Pfam PF03952 Enolase, N-terminal domain 4 134 3.3E-61 T 26-04-2016 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 smi_1159 3c346bb13190e1b9a0a72d4216dc59ad 434 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 431 1.5E-207 T 26-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 smi_1159 3c346bb13190e1b9a0a72d4216dc59ad 434 SMART SM01192 139 431 9.5E-214 T 26-04-2016 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 smi_0358 12ae27ac39c3a4d485d0b67db7caf4a6 559 Pfam PF05598 Transposase domain (DUF772) 49 109 9.6E-10 T 26-04-2016 IPR008490 Transposase InsH, N-terminal smi_0358 12ae27ac39c3a4d485d0b67db7caf4a6 559 PANTHER PTHR33408:SF1 1 516 1.1E-106 T 26-04-2016 smi_0358 12ae27ac39c3a4d485d0b67db7caf4a6 559 Pfam PF01609 Transposase DDE domain 266 513 1.9E-26 T 26-04-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 smi_0358 12ae27ac39c3a4d485d0b67db7caf4a6 559 PANTHER PTHR33408 1 516 1.1E-106 T 26-04-2016 smi_1208 f29e04ee65d37fd2e32380e60e4835b9 264 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 259 8.1E-50 T 26-04-2016 IPR023214 HAD-like domain smi_1208 f29e04ee65d37fd2e32380e60e4835b9 264 SUPERFAMILY SSF56784 1 262 1.63E-55 T 26-04-2016 IPR023214 HAD-like domain smi_1208 f29e04ee65d37fd2e32380e60e4835b9 264 PANTHER PTHR10000 1 262 2.2E-99 T 26-04-2016 smi_1208 f29e04ee65d37fd2e32380e60e4835b9 264 PANTHER PTHR10000:SF27 1 262 2.2E-99 T 26-04-2016 smi_1208 f29e04ee65d37fd2e32380e60e4835b9 264 ProSitePatterns PS01229 Hypothetical cof family signature 2. 215 237 - T 26-04-2016 smi_1208 f29e04ee65d37fd2e32380e60e4835b9 264 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 233 1.9E-21 T 26-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 smi_1208 f29e04ee65d37fd2e32380e60e4835b9 264 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 260 1.4E-43 T 26-04-2016 IPR000150 Cof protein GO:0016787 smi_1208 f29e04ee65d37fd2e32380e60e4835b9 264 Gene3D G3DSA:3.30.1240.10 83 179 2.5E-27 T 26-04-2016 smi_1208 f29e04ee65d37fd2e32380e60e4835b9 264 Gene3D G3DSA:3.40.50.1000 1 74 5.1E-39 T 26-04-2016 IPR023214 HAD-like domain smi_1208 f29e04ee65d37fd2e32380e60e4835b9 264 Gene3D G3DSA:3.40.50.1000 180 262 5.1E-39 T 26-04-2016 IPR023214 HAD-like domain smi_1472 3296e21e345950b7a88a7bd66756db3d 309 SUPERFAMILY SSF56281 1 309 1.35E-78 T 26-04-2016 IPR001279 Metallo-beta-lactamase smi_1472 3296e21e345950b7a88a7bd66756db3d 309 Gene3D G3DSA:3.60.15.10 3 309 2.3E-82 T 26-04-2016 IPR001279 Metallo-beta-lactamase smi_1472 3296e21e345950b7a88a7bd66756db3d 309 Pfam PF00753 Metallo-beta-lactamase superfamily 33 89 9.9E-9 T 26-04-2016 IPR001279 Metallo-beta-lactamase smi_1472 3296e21e345950b7a88a7bd66756db3d 309 Pfam PF12706 Beta-lactamase superfamily domain 206 275 1.1E-6 T 26-04-2016 IPR001279 Metallo-beta-lactamase smi_1472 3296e21e345950b7a88a7bd66756db3d 309 PANTHER PTHR12553 187 309 1.1E-82 T 26-04-2016 smi_1472 3296e21e345950b7a88a7bd66756db3d 309 PANTHER PTHR12553 1 156 1.1E-82 T 26-04-2016 smi_1472 3296e21e345950b7a88a7bd66756db3d 309 Hamap MF_01818 Ribonuclease BN [rbn]. 1 309 39.084 T 26-04-2016 IPR013471 Ribonuclease Z/BN GO:0016891|GO:0042779 smi_1472 3296e21e345950b7a88a7bd66756db3d 309 TIGRFAM TIGR02651 RNase_Z: ribonuclease Z 3 309 7.0E-108 T 26-04-2016 IPR013471 Ribonuclease Z/BN GO:0016891|GO:0042779 smi_0765 9607e612cf6c9b40c0cd23f8fa19bbde 282 PANTHER PTHR21022 1 272 1.3E-105 T 26-04-2016 smi_0765 9607e612cf6c9b40c0cd23f8fa19bbde 282 Gene3D G3DSA:3.40.190.10 88 165 5.5E-25 T 26-04-2016 smi_0765 9607e612cf6c9b40c0cd23f8fa19bbde 282 Gene3D G3DSA:3.40.190.10 1 87 3.5E-29 T 26-04-2016 smi_0765 9607e612cf6c9b40c0cd23f8fa19bbde 282 SUPERFAMILY SSF53850 1 181 4.02E-52 T 26-04-2016 smi_0765 9607e612cf6c9b40c0cd23f8fa19bbde 282 SUPERFAMILY SSF55021 173 270 5.41E-24 T 26-04-2016 smi_0765 9607e612cf6c9b40c0cd23f8fa19bbde 282 PIRSF PIRSF001500 1 276 7.1E-69 T 26-04-2016 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 smi_0765 9607e612cf6c9b40c0cd23f8fa19bbde 282 Pfam PF00800 Prephenate dehydratase 3 180 3.2E-58 T 26-04-2016 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 smi_0765 9607e612cf6c9b40c0cd23f8fa19bbde 282 Gene3D G3DSA:3.30.70.260 188 272 1.6E-25 T 26-04-2016 smi_0765 9607e612cf6c9b40c0cd23f8fa19bbde 282 ProSitePatterns PS00858 Prephenate dehydratase signature 2. 220 227 - T 26-04-2016 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 smi_1416 eb3954cd35fead8a5f7828eb9f822d10 91 PANTHER PTHR41304:SF1 3 90 1.4E-30 T 26-04-2016 smi_1416 eb3954cd35fead8a5f7828eb9f822d10 91 PANTHER PTHR41304 3 90 1.4E-30 T 26-04-2016 smi_1416 eb3954cd35fead8a5f7828eb9f822d10 91 PIRSF PIRSF031653 1 90 1.4E-29 T 26-04-2016 IPR016979 Protein of unknown function DUF2129 smi_1416 eb3954cd35fead8a5f7828eb9f822d10 91 Pfam PF09902 Uncharacterized protein conserved in bacteria (DUF2129) 7 76 3.0E-26 T 26-04-2016 IPR016979 Protein of unknown function DUF2129 smi_1416 eb3954cd35fead8a5f7828eb9f822d10 91 Hamap MF_01126 UPF0298 protein . 3 80 20.559 T 26-04-2016 IPR016979 Protein of unknown function DUF2129 smi_0602 ce5cf4d79dadf530c1ae7f92121fe22c 232 Hamap MF_01235 Putative N-acetylmannosamine-6-phosphate 2-epimerase [nanE]. 11 232 39.965 T 26-04-2016 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase GO:0006051|GO:0047465 KEGG: 00520+5.1.3.9|UniPathway: UPA00629 smi_0602 ce5cf4d79dadf530c1ae7f92121fe22c 232 Pfam PF04131 Putative N-acetylmannosamine-6-phosphate epimerase 38 231 1.7E-84 T 26-04-2016 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase GO:0006051|GO:0047465 KEGG: 00520+5.1.3.9|UniPathway: UPA00629 smi_0602 ce5cf4d79dadf530c1ae7f92121fe22c 232 PANTHER PTHR36204:SF1 2 232 5.9E-114 T 26-04-2016 smi_0602 ce5cf4d79dadf530c1ae7f92121fe22c 232 Gene3D G3DSA:3.20.20.70 3 231 1.5E-94 T 26-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 smi_0602 ce5cf4d79dadf530c1ae7f92121fe22c 232 SUPERFAMILY SSF51366 12 229 1.41E-53 T 26-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 smi_0602 ce5cf4d79dadf530c1ae7f92121fe22c 232 PANTHER PTHR36204 2 232 5.9E-114 T 26-04-2016 smi_1166 a65790a1f8fe83e6aea0bf5095f36726 642 SUPERFAMILY SSF51011 519 621 6.19E-27 T 26-04-2016 smi_1166 a65790a1f8fe83e6aea0bf5095f36726 642 Gene3D G3DSA:2.60.40.10 10 116 2.0E-32 T 26-04-2016 IPR013783 Immunoglobulin-like fold smi_1166 a65790a1f8fe83e6aea0bf5095f36726 642 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 524 620 8.3E-18 T 26-04-2016 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|Reactome: REACT_474 smi_1166 a65790a1f8fe83e6aea0bf5095f36726 642 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 22 103 2.1E-21 T 26-04-2016 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 smi_1166 a65790a1f8fe83e6aea0bf5095f36726 642 Gene3D G3DSA:2.60.40.1180 518 620 2.5E-29 T 26-04-2016 IPR013780 Glycosyl hydrolase, all-beta smi_1166 a65790a1f8fe83e6aea0bf5095f36726 642 Gene3D G3DSA:3.20.20.80 142 506 4.0E-79 T 26-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 smi_1166 a65790a1f8fe83e6aea0bf5095f36726 642 SMART SM00642 147 505 2.6E-7 T 26-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 smi_1166 a65790a1f8fe83e6aea0bf5095f36726 642 SUPERFAMILY SSF81296 12 113 6.06E-17 T 26-04-2016 IPR014756 Immunoglobulin E-set smi_1166 a65790a1f8fe83e6aea0bf5095f36726 642 PANTHER PTHR10357 7 620 4.5E-291 T 26-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 smi_1166 a65790a1f8fe83e6aea0bf5095f36726 642 Pfam PF00128 Alpha amylase, catalytic domain 172 246 1.1E-6 T 26-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 smi_1166 a65790a1f8fe83e6aea0bf5095f36726 642 PANTHER PTHR10357:SF160 7 620 4.5E-291 T 26-04-2016 smi_1166 a65790a1f8fe83e6aea0bf5095f36726 642 PIRSF PIRSF000463 1 631 3.8E-245 T 26-04-2016 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00164 smi_1166 a65790a1f8fe83e6aea0bf5095f36726 642 TIGRFAM TIGR01515 branching_enzym: 1,4-alpha-glucan branching enzyme 10 617 4.1E-202 T 26-04-2016 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00164 smi_1166 a65790a1f8fe83e6aea0bf5095f36726 642 SUPERFAMILY SSF51445 79 511 2.06E-95 T 26-04-2016 IPR017853 Glycoside hydrolase superfamily smi_0659 11a604f84c8e68210f14d9434dcc56df 336 Gene3D G3DSA:3.40.50.1980 52 188 1.3E-16 T 26-04-2016 smi_0659 11a604f84c8e68210f14d9434dcc56df 336 PANTHER PTHR30535 46 334 6.0E-23 T 26-04-2016 smi_0659 11a604f84c8e68210f14d9434dcc56df 336 Pfam PF01497 Periplasmic binding protein 71 311 4.0E-46 T 26-04-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 smi_0659 11a604f84c8e68210f14d9434dcc56df 336 Gene3D G3DSA:3.40.50.1980 190 334 6.6E-24 T 26-04-2016 smi_0659 11a604f84c8e68210f14d9434dcc56df 336 SUPERFAMILY SSF53807 61 334 3.89E-43 T 26-04-2016 smi_0064 4f05aa5ad77887d5f9bfefac4fb8a1ca 717 SUPERFAMILY SSF90123 157 458 2.88E-65 T 26-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 smi_0064 4f05aa5ad77887d5f9bfefac4fb8a1ca 717 Gene3D G3DSA:3.90.70.10 12 140 3.8E-18 T 26-04-2016 smi_0064 4f05aa5ad77887d5f9bfefac4fb8a1ca 717 Gene3D G3DSA:1.20.1560.10 157 462 1.3E-73 T 26-04-2016 smi_0064 4f05aa5ad77887d5f9bfefac4fb8a1ca 717 SMART SM00382 509 694 1.2E-19 T 26-04-2016 IPR003593 AAA+ ATPase domain smi_0064 4f05aa5ad77887d5f9bfefac4fb8a1ca 717 Pfam PF03412 Peptidase C39 family 7 142 1.6E-41 T 26-04-2016 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 smi_0064 4f05aa5ad77887d5f9bfefac4fb8a1ca 717 PANTHER PTHR24221 142 716 1.5E-171 T 26-04-2016 smi_0064 4f05aa5ad77887d5f9bfefac4fb8a1ca 717 TIGRFAM TIGR01193 bacteriocin_ABC: ABC-type bacteriocin transporter 11 716 0.0 T 26-04-2016 IPR005897 Peptidase C39, ABC-type bacteriocin transporter GO:0008234|GO:0016020|GO:0022885|GO:0043213 KEGG: 00900+3.4.22.- smi_0064 4f05aa5ad77887d5f9bfefac4fb8a1ca 717 Pfam PF00005 ABC transporter 500 650 8.6E-32 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 smi_0064 4f05aa5ad77887d5f9bfefac4fb8a1ca 717 Gene3D G3DSA:3.40.50.300 484 712 9.3E-71 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0064 4f05aa5ad77887d5f9bfefac4fb8a1ca 717 ProSitePatterns PS00211 ABC transporters family signature. 622 636 - T 26-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 smi_0064 4f05aa5ad77887d5f9bfefac4fb8a1ca 717 SUPERFAMILY SSF52540 477 716 1.33E-77 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0064 4f05aa5ad77887d5f9bfefac4fb8a1ca 717 Pfam PF00664 ABC transporter transmembrane region 170 438 1.7E-62 T 26-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 smi_0143 3c1bdb21a3e740b17a2f90b9c3cf7fbb 232 Hamap MF_01691 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase [dapH]. 3 231 41.436 T 26-04-2016 IPR019873 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase, DapH GO:0009089|GO:0047200 KEGG: 00300+2.3.1.89|MetaCyc: PWY-2941|UniPathway: UPA00034 smi_0143 3c1bdb21a3e740b17a2f90b9c3cf7fbb 232 TIGRFAM TIGR03532 DapD_Ac: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase 8 232 2.3E-106 T 26-04-2016 IPR019873 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase, DapH GO:0009089|GO:0047200 KEGG: 00300+2.3.1.89|MetaCyc: PWY-2941|UniPathway: UPA00034 smi_0143 3c1bdb21a3e740b17a2f90b9c3cf7fbb 232 Gene3D G3DSA:3.30.70.250 4 83 1.5E-32 T 26-04-2016 smi_0143 3c1bdb21a3e740b17a2f90b9c3cf7fbb 232 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 170 198 - T 26-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 smi_0143 3c1bdb21a3e740b17a2f90b9c3cf7fbb 232 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 126 154 - T 26-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 smi_0143 3c1bdb21a3e740b17a2f90b9c3cf7fbb 232 SUPERFAMILY SSF51161 84 218 3.14E-48 T 26-04-2016 IPR011004 Trimeric LpxA-like smi_0143 3c1bdb21a3e740b17a2f90b9c3cf7fbb 232 PANTHER PTHR23416 53 232 5.2E-51 T 26-04-2016 smi_0143 3c1bdb21a3e740b17a2f90b9c3cf7fbb 232 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 161 196 2.1E-11 T 26-04-2016 IPR001451 Hexapeptide repeat smi_0143 3c1bdb21a3e740b17a2f90b9c3cf7fbb 232 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 87 115 2.5E-5 T 26-04-2016 IPR001451 Hexapeptide repeat smi_0143 3c1bdb21a3e740b17a2f90b9c3cf7fbb 232 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 118 152 8.6E-8 T 26-04-2016 IPR001451 Hexapeptide repeat smi_0143 3c1bdb21a3e740b17a2f90b9c3cf7fbb 232 Pfam PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal 6 82 4.0E-22 T 26-04-2016 IPR013710 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase, N-terminal GO:0047200 KEGG: 00300+2.3.1.89|MetaCyc: PWY-2941|UniPathway: UPA00034 smi_0143 3c1bdb21a3e740b17a2f90b9c3cf7fbb 232 Gene3D G3DSA:2.160.10.10 85 221 6.9E-48 T 26-04-2016 smi_0143 3c1bdb21a3e740b17a2f90b9c3cf7fbb 232 PANTHER PTHR23416:SF50 53 232 5.2E-51 T 26-04-2016 smi_0342 5655e6eeb54afe4ca84484555911ba15 354 PANTHER PTHR32481:SF0 1 354 4.5E-164 T 26-04-2016 smi_0342 5655e6eeb54afe4ca84484555911ba15 354 Gene3D G3DSA:3.40.630.10 2 74 2.8E-74 T 26-04-2016 smi_0342 5655e6eeb54afe4ca84484555911ba15 354 Gene3D G3DSA:3.40.630.10 170 353 2.8E-74 T 26-04-2016 smi_0342 5655e6eeb54afe4ca84484555911ba15 354 PANTHER PTHR32481 1 354 4.5E-164 T 26-04-2016 smi_0342 5655e6eeb54afe4ca84484555911ba15 354 Gene3D G3DSA:2.40.30.40 76 163 2.5E-30 T 26-04-2016 IPR023367 Peptidase M42, domain 2 smi_0342 5655e6eeb54afe4ca84484555911ba15 354 PIRSF PIRSF001123 1 354 1.2E-135 T 26-04-2016 IPR008007 Peptidase M42 smi_0342 5655e6eeb54afe4ca84484555911ba15 354 Pfam PF05343 M42 glutamyl aminopeptidase 45 333 3.7E-96 T 26-04-2016 IPR008007 Peptidase M42 smi_0342 5655e6eeb54afe4ca84484555911ba15 354 SUPERFAMILY SSF53187 5 81 1.13E-57 T 26-04-2016 smi_0342 5655e6eeb54afe4ca84484555911ba15 354 SUPERFAMILY SSF53187 173 351 1.13E-57 T 26-04-2016 smi_0342 5655e6eeb54afe4ca84484555911ba15 354 SUPERFAMILY SSF101821 71 181 1.13E-25 T 26-04-2016 smi_0342 5655e6eeb54afe4ca84484555911ba15 354 TIGRFAM TIGR03107 glu_aminopep: glutamyl aminopeptidase 5 352 7.7E-187 T 26-04-2016 IPR017538 Peptidase M42, glutamyl aminopeptidase MetaCyc: PWY-5706|MetaCyc: PWY-5707|MetaCyc: PWY-7614 smi_0123 23eff56ef286701516b8831897fb98f5 274 PANTHER PTHR24220 3 266 2.0E-106 T 26-04-2016 smi_0123 23eff56ef286701516b8831897fb98f5 274 SUPERFAMILY SSF52540 2 221 2.0E-62 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0123 23eff56ef286701516b8831897fb98f5 274 PANTHER PTHR24220:SF428 3 266 2.0E-106 T 26-04-2016 smi_0123 23eff56ef286701516b8831897fb98f5 274 Gene3D G3DSA:3.40.50.300 1 223 6.9E-66 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0123 23eff56ef286701516b8831897fb98f5 274 SMART SM00382 26 204 8.6E-13 T 26-04-2016 IPR003593 AAA+ ATPase domain smi_0123 23eff56ef286701516b8831897fb98f5 274 Pfam PF00005 ABC transporter 17 157 2.0E-29 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 smi_1511 79105872abf2a2f0e13da87d684d7d8d 540 Pfam PF01943 Polysaccharide biosynthesis protein 13 318 1.4E-31 T 26-04-2016 IPR002797 Polysaccharide biosynthesis protein GO:0016020 smi_1511 79105872abf2a2f0e13da87d684d7d8d 540 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 374 520 8.1E-23 T 26-04-2016 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain smi_1511 79105872abf2a2f0e13da87d684d7d8d 540 PANTHER PTHR30250 2 536 5.7E-220 T 26-04-2016 smi_1511 79105872abf2a2f0e13da87d684d7d8d 540 PANTHER PTHR30250:SF6 2 536 5.7E-220 T 26-04-2016 smi_0876 a4f34fa7f9b20830896997e9d9af4aa1 269 TIGRFAM TIGR01700 PNPH: purine nucleoside phosphorylase I, inosine and guanosine-specific 24 266 2.4E-103 T 26-04-2016 IPR011270 Purine nucleoside phosphorylase I, inosine/guanosine-specific GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|UniPathway: UPA00606 smi_0876 a4f34fa7f9b20830896997e9d9af4aa1 269 PANTHER PTHR11904 1 269 6.5E-124 T 26-04-2016 IPR001369 PNP/MTAP phosphorylase smi_0876 a4f34fa7f9b20830896997e9d9af4aa1 269 PIRSF PIRSF000477 1 269 1.2E-107 T 26-04-2016 IPR011268 Purine nucleoside phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|UniPathway: UPA00606 smi_0876 a4f34fa7f9b20830896997e9d9af4aa1 269 TIGRFAM TIGR01697 PNPH-PUNA-XAPA: inosine/guanosine/xanthosine phosphorylase family 25 266 3.8E-102 T 26-04-2016 IPR011268 Purine nucleoside phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|UniPathway: UPA00606 smi_0876 a4f34fa7f9b20830896997e9d9af4aa1 269 PANTHER PTHR11904:SF9 1 269 6.5E-124 T 26-04-2016 IPR011268 Purine nucleoside phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|UniPathway: UPA00606 smi_0876 a4f34fa7f9b20830896997e9d9af4aa1 269 SUPERFAMILY SSF53167 2 269 2.5E-88 T 26-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 smi_0876 a4f34fa7f9b20830896997e9d9af4aa1 269 ProSitePatterns PS01240 Purine and other phosphorylases family 2 signature. 76 117 - T 26-04-2016 IPR018099 Purine phosphorylase, family 2, conserved site GO:0016763 smi_0876 a4f34fa7f9b20830896997e9d9af4aa1 269 Gene3D G3DSA:3.40.50.1580 3 269 7.4E-104 T 26-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 smi_0876 a4f34fa7f9b20830896997e9d9af4aa1 269 Pfam PF01048 Phosphorylase superfamily 24 267 2.4E-50 T 26-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 smi_1534 90e60078b61f61ed4e7290034b60f995 2391 SUPERFAMILY SSF49303 376 477 1.12E-11 T 26-04-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 smi_1534 90e60078b61f61ed4e7290034b60f995 2391 Gene3D G3DSA:2.60.120.260 171 346 3.5E-41 T 26-04-2016 IPR008979 Galactose-binding domain-like smi_1534 90e60078b61f61ed4e7290034b60f995 2391 Pfam PF00703 Glycosyl hydrolases family 2 367 477 7.9E-12 T 26-04-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 smi_1534 90e60078b61f61ed4e7290034b60f995 2391 Pfam PF07532 Bacterial Ig-like domain (group 4) 1045 1100 1.6E-11 T 26-04-2016 IPR011081 Bacterial Ig-related KEGG: 00511+3.2.1.18|KEGG: 00600+3.2.1.18 smi_1534 90e60078b61f61ed4e7290034b60f995 2391 Pfam PF07532 Bacterial Ig-like domain (group 4) 1381 1436 6.4E-7 T 26-04-2016 IPR011081 Bacterial Ig-related KEGG: 00511+3.2.1.18|KEGG: 00600+3.2.1.18 smi_1534 90e60078b61f61ed4e7290034b60f995 2391 Pfam PF07532 Bacterial Ig-like domain (group 4) 1798 1857 1.1E-9 T 26-04-2016 IPR011081 Bacterial Ig-related KEGG: 00511+3.2.1.18|KEGG: 00600+3.2.1.18 smi_1534 90e60078b61f61ed4e7290034b60f995 2391 Pfam PF07532 Bacterial Ig-like domain (group 4) 1455 1510 6.9E-8 T 26-04-2016 IPR011081 Bacterial Ig-related KEGG: 00511+3.2.1.18|KEGG: 00600+3.2.1.18 smi_1534 90e60078b61f61ed4e7290034b60f995 2391 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 485 759 4.0E-23 T 26-04-2016 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 smi_1534 90e60078b61f61ed4e7290034b60f995 2391 PRINTS PR00132 Glycosyl hydrolase family 2 signature 520 538 1.9E-11 T 26-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 smi_1534 90e60078b61f61ed4e7290034b60f995 2391 PRINTS PR00132 Glycosyl hydrolase family 2 signature 489 503 1.9E-11 T 26-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 smi_1534 90e60078b61f61ed4e7290034b60f995 2391 PRINTS PR00132 Glycosyl hydrolase family 2 signature 288 303 1.9E-11 T 26-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 smi_1534 90e60078b61f61ed4e7290034b60f995 2391 PRINTS PR00132 Glycosyl hydrolase family 2 signature 602 617 1.9E-11 T 26-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 smi_1534 90e60078b61f61ed4e7290034b60f995 2391 SUPERFAMILY SSF49785 202 357 2.43E-42 T 26-04-2016 IPR008979 Galactose-binding domain-like smi_1534 90e60078b61f61ed4e7290034b60f995 2391 TIGRFAM TIGR01168 YSIRK_signal: gram-positive signal peptide, YSIRK family 5 44 3.2E-14 T 26-04-2016 IPR005877 YSIRK Gram-positive signal peptide GO:0016020 smi_1534 90e60078b61f61ed4e7290034b60f995 2391 Gene3D G3DSA:2.60.40.920 923 1032 9.2E-4 T 26-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain smi_1534 90e60078b61f61ed4e7290034b60f995 2391 Gene3D G3DSA:2.60.40.1560 815 922 2.7E-20 T 26-04-2016 smi_1534 90e60078b61f61ed4e7290034b60f995 2391 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 206 353 4.6E-23 T 26-04-2016 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 smi_1534 90e60078b61f61ed4e7290034b60f995 2391 SUPERFAMILY SSF51445 474 804 2.74E-57 T 26-04-2016 IPR017853 Glycoside hydrolase superfamily smi_1534 90e60078b61f61ed4e7290034b60f995 2391 TIGRFAM TIGR01167 LPXTG_anchor: LPXTG cell wall anchor domain 2357 2390 1.9E-4 T 26-04-2016 IPR019931 LPXTG cell wall anchor domain smi_1534 90e60078b61f61ed4e7290034b60f995 2391 Gene3D G3DSA:3.20.20.80 482 804 2.7E-69 T 26-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 smi_1534 90e60078b61f61ed4e7290034b60f995 2391 PANTHER PTHR10066:SF46 206 713 1.5E-165 T 26-04-2016 smi_1534 90e60078b61f61ed4e7290034b60f995 2391 PANTHER PTHR10066:SF46 748 859 1.5E-165 T 26-04-2016 smi_1534 90e60078b61f61ed4e7290034b60f995 2391 Pfam PF07501 G5 domain 2157 2222 2.4E-8 T 26-04-2016 IPR011098 G5 domain smi_1534 90e60078b61f61ed4e7290034b60f995 2391 Pfam PF16355 Domain of unknown function (DUF4982) 836 910 1.1E-19 T 26-04-2016 IPR032311 Domain of unknown function DUF4982 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 smi_1534 90e60078b61f61ed4e7290034b60f995 2391 Pfam PF04650 YSIRK type signal peptide 11 36 1.3E-10 T 26-04-2016 IPR005877 YSIRK Gram-positive signal peptide GO:0016020 smi_1534 90e60078b61f61ed4e7290034b60f995 2391 PANTHER PTHR10066 206 713 1.5E-165 T 26-04-2016 smi_1534 90e60078b61f61ed4e7290034b60f995 2391 PANTHER PTHR10066 748 859 1.5E-165 T 26-04-2016 smi_1534 90e60078b61f61ed4e7290034b60f995 2391 Gene3D G3DSA:2.60.40.320 347 478 2.2E-26 T 26-04-2016 IPR013812 Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain GO:0004553|GO:0005975 smi_1534 90e60078b61f61ed4e7290034b60f995 2391 SMART SM01208 2151 2223 5.9E-12 T 26-04-2016 IPR011098 G5 domain smi_1411 057c650df006ef504accad4b53c6ea53 236 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 26-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 smi_1411 057c650df006ef504accad4b53c6ea53 236 PANTHER PTHR24220 5 235 5.0E-136 T 26-04-2016 smi_1411 057c650df006ef504accad4b53c6ea53 236 SMART SM00382 28 215 9.6E-9 T 26-04-2016 IPR003593 AAA+ ATPase domain smi_1411 057c650df006ef504accad4b53c6ea53 236 Pfam PF00005 ABC transporter 20 164 1.4E-32 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 smi_1411 057c650df006ef504accad4b53c6ea53 236 SUPERFAMILY SSF52540 3 234 4.99E-62 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1411 057c650df006ef504accad4b53c6ea53 236 PANTHER PTHR24220:SF568 5 235 5.0E-136 T 26-04-2016 smi_1411 057c650df006ef504accad4b53c6ea53 236 Gene3D G3DSA:3.40.50.300 3 231 7.5E-67 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1411 057c650df006ef504accad4b53c6ea53 236 PIRSF PIRSF039137 1 236 1.4E-109 T 26-04-2016 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein GO:0015658|GO:0015803 smi_1721 1916b854d5faba9ca1e189786118a29a 182 PANTHER PTHR35446:SF1 1 181 1.4E-96 T 26-04-2016 smi_1721 1916b854d5faba9ca1e189786118a29a 182 Pfam PF02627 Carboxymuconolactone decarboxylase family 43 120 4.0E-12 T 26-04-2016 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 smi_1721 1916b854d5faba9ca1e189786118a29a 182 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 58 87 3.4E-10 T 26-04-2016 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 smi_1721 1916b854d5faba9ca1e189786118a29a 182 PANTHER PTHR35446 1 181 1.4E-96 T 26-04-2016 smi_1721 1916b854d5faba9ca1e189786118a29a 182 Gene3D G3DSA:1.20.1290.10 1 88 9.2E-34 T 26-04-2016 IPR029032 AhpD-like smi_1721 1916b854d5faba9ca1e189786118a29a 182 Gene3D G3DSA:1.20.1290.10 124 181 9.2E-34 T 26-04-2016 IPR029032 AhpD-like smi_1721 1916b854d5faba9ca1e189786118a29a 182 SUPERFAMILY SSF69118 1 181 9.72E-42 T 26-04-2016 IPR029032 AhpD-like smi_1019 802b77df868ae3a25e7a46a4d5b6e414 555 SUPERFAMILY SSF52540 2 50 5.42E-30 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1019 802b77df868ae3a25e7a46a4d5b6e414 555 SUPERFAMILY SSF52540 296 505 5.42E-30 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1019 802b77df868ae3a25e7a46a4d5b6e414 555 Gene3D G3DSA:3.40.50.300 430 506 1.6E-7 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1019 802b77df868ae3a25e7a46a4d5b6e414 555 Gene3D G3DSA:3.40.50.300 376 382 1.6E-7 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1019 802b77df868ae3a25e7a46a4d5b6e414 555 Pfam PF02463 RecF/RecN/SMC N terminal domain 2 510 8.4E-20 T 26-04-2016 IPR003395 RecF/RecN/SMC, N-terminal smi_1019 802b77df868ae3a25e7a46a4d5b6e414 555 PIRSF PIRSF003128 1 555 5.9E-174 T 26-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 smi_1019 802b77df868ae3a25e7a46a4d5b6e414 555 SUPERFAMILY SSF52540 1 219 6.45E-64 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1019 802b77df868ae3a25e7a46a4d5b6e414 555 Gene3D G3DSA:3.40.50.300 1 208 3.3E-66 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1019 802b77df868ae3a25e7a46a4d5b6e414 555 PANTHER PTHR11059 2 555 6.2E-167 T 26-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 smi_1019 802b77df868ae3a25e7a46a4d5b6e414 555 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 551 1.8E-165 T 26-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 smi_2037 91fbf1a04d03e53a300235024786cd31 361 Pfam PF01430 Hsp33 protein 73 349 9.9E-80 T 26-04-2016 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 smi_2037 91fbf1a04d03e53a300235024786cd31 361 Gene3D G3DSA:3.90.1280.10 304 359 6.8E-25 T 26-04-2016 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 smi_2037 91fbf1a04d03e53a300235024786cd31 361 Hamap MF_00117 33 kDa chaperonin [hslO]. 72 360 36.107 T 26-04-2016 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 smi_2037 91fbf1a04d03e53a300235024786cd31 361 PANTHER PTHR30111:SF1 65 361 2.2E-84 T 26-04-2016 smi_2037 91fbf1a04d03e53a300235024786cd31 361 Gene3D G3DSA:3.55.30.10 72 303 5.3E-73 T 26-04-2016 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 smi_2037 91fbf1a04d03e53a300235024786cd31 361 SUPERFAMILY SSF118352 302 358 7.72E-20 T 26-04-2016 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 smi_2037 91fbf1a04d03e53a300235024786cd31 361 SUPERFAMILY SSF64397 72 309 1.57E-62 T 26-04-2016 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 smi_2037 91fbf1a04d03e53a300235024786cd31 361 PANTHER PTHR30111 65 361 2.2E-84 T 26-04-2016 smi_0348 bf7f024e12bb04886d0cbf90a6736bc8 118 SUPERFAMILY SSF46955 13 105 5.49E-19 T 26-04-2016 IPR009061 Putative DNA-binding domain smi_0348 bf7f024e12bb04886d0cbf90a6736bc8 118 SMART SM00422 13 81 1.7E-18 T 26-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 smi_0348 bf7f024e12bb04886d0cbf90a6736bc8 118 PANTHER PTHR30204 5 108 1.7E-37 T 26-04-2016 smi_0348 bf7f024e12bb04886d0cbf90a6736bc8 118 Pfam PF13411 MerR HTH family regulatory protein 14 77 7.5E-18 T 26-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 smi_0348 bf7f024e12bb04886d0cbf90a6736bc8 118 Gene3D G3DSA:1.10.1660.10 14 99 4.8E-21 T 26-04-2016 smi_0348 bf7f024e12bb04886d0cbf90a6736bc8 118 PANTHER PTHR30204:SF8 5 108 1.7E-37 T 26-04-2016 smi_2023 86afdb40e034b47107134f55b8ff8567 309 PIRSF PIRSF019271 1 286 3.0E-100 T 26-04-2016 IPR006423 5-nucleotidase lipoprotein e(P4) GO:0009279 smi_2023 86afdb40e034b47107134f55b8ff8567 309 TIGRFAM TIGR01533 lipo_e_P4: 5'-nucleotidase, lipoprotein e(P4) family 1 281 1.0E-104 T 26-04-2016 IPR006423 5-nucleotidase lipoprotein e(P4) GO:0009279 smi_2023 86afdb40e034b47107134f55b8ff8567 309 PANTHER PTHR31284:SF10 40 223 3.5E-60 T 26-04-2016 smi_2023 86afdb40e034b47107134f55b8ff8567 309 PANTHER PTHR31284:SF10 241 257 3.5E-60 T 26-04-2016 smi_2023 86afdb40e034b47107134f55b8ff8567 309 PANTHER PTHR31284 40 223 3.5E-60 T 26-04-2016 smi_2023 86afdb40e034b47107134f55b8ff8567 309 PANTHER PTHR31284 241 257 3.5E-60 T 26-04-2016 smi_2023 86afdb40e034b47107134f55b8ff8567 309 Pfam PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) 34 257 3.6E-54 T 26-04-2016 IPR005519 Acid phosphatase, class B-like smi_2023 86afdb40e034b47107134f55b8ff8567 309 Gene3D G3DSA:3.40.50.1000 58 265 1.1E-68 T 26-04-2016 IPR023214 HAD-like domain smi_2023 86afdb40e034b47107134f55b8ff8567 309 SUPERFAMILY SSF56784 69 264 1.48E-45 T 26-04-2016 IPR023214 HAD-like domain smi_1757 c81c726d601efb2ed33c8b0e62a4abeb 726 PANTHER PTHR32282 2 562 9.7E-210 T 26-04-2016 smi_1757 c81c726d601efb2ed33c8b0e62a4abeb 726 PANTHER PTHR32282 578 726 9.7E-210 T 26-04-2016 smi_1757 c81c726d601efb2ed33c8b0e62a4abeb 726 SUPERFAMILY SSF56601 218 240 2.33E-85 T 26-04-2016 IPR012338 Beta-lactamase/transpeptidase-like smi_1757 c81c726d601efb2ed33c8b0e62a4abeb 726 SUPERFAMILY SSF56601 273 642 2.33E-85 T 26-04-2016 IPR012338 Beta-lactamase/transpeptidase-like smi_1757 c81c726d601efb2ed33c8b0e62a4abeb 726 Gene3D G3DSA:1.10.3810.10 60 238 1.8E-69 T 26-04-2016 smi_1757 c81c726d601efb2ed33c8b0e62a4abeb 726 Pfam PF00905 Penicillin binding protein transpeptidase domain 331 595 3.7E-30 T 26-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 smi_1757 c81c726d601efb2ed33c8b0e62a4abeb 726 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 70 627 7.5E-171 T 26-04-2016 smi_1757 c81c726d601efb2ed33c8b0e62a4abeb 726 SUPERFAMILY SSF53955 50 263 1.1E-68 T 26-04-2016 IPR023346 Lysozyme-like domain smi_1757 c81c726d601efb2ed33c8b0e62a4abeb 726 Gene3D G3DSA:3.40.710.10 239 643 7.2E-88 T 26-04-2016 IPR012338 Beta-lactamase/transpeptidase-like smi_1757 c81c726d601efb2ed33c8b0e62a4abeb 726 PANTHER PTHR32282:SF0 2 562 9.7E-210 T 26-04-2016 smi_1757 c81c726d601efb2ed33c8b0e62a4abeb 726 PANTHER PTHR32282:SF0 578 726 9.7E-210 T 26-04-2016 smi_1757 c81c726d601efb2ed33c8b0e62a4abeb 726 Pfam PF00912 Transglycosylase 60 237 8.2E-60 T 26-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 smi_1695 57addb7dadcc1027344b6ed6c3288c78 335 PANTHER PTHR21666 217 333 2.8E-33 T 26-04-2016 smi_1695 57addb7dadcc1027344b6ed6c3288c78 335 Pfam PF00877 NlpC/P60 family 226 331 9.0E-30 T 26-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- smi_1695 57addb7dadcc1027344b6ed6c3288c78 335 SUPERFAMILY SSF53955 53 154 2.06E-9 T 26-04-2016 IPR023346 Lysozyme-like domain smi_1695 57addb7dadcc1027344b6ed6c3288c78 335 Gene3D G3DSA:3.90.1720.10 210 334 8.1E-45 T 26-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- smi_1695 57addb7dadcc1027344b6ed6c3288c78 335 Gene3D G3DSA:1.10.530.10 36 148 1.6E-10 T 26-04-2016 smi_1695 57addb7dadcc1027344b6ed6c3288c78 335 SUPERFAMILY SSF54001 206 334 2.45E-41 T 26-04-2016 smi_1695 57addb7dadcc1027344b6ed6c3288c78 335 Pfam PF13702 Lysozyme-like 48 203 7.7E-58 T 26-04-2016 smi_1072 14b740c79a03c7522aa78fa7dd4446fd 292 SUPERFAMILY SSF47384 67 142 4.51E-10 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 smi_1072 14b740c79a03c7522aa78fa7dd4446fd 292 SMART SM00388 82 145 8.2E-8 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 smi_1072 14b740c79a03c7522aa78fa7dd4446fd 292 PANTHER PTHR24423 61 283 5.5E-23 T 26-04-2016 smi_1072 14b740c79a03c7522aa78fa7dd4446fd 292 SUPERFAMILY SSF55874 152 289 1.05E-16 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain smi_1072 14b740c79a03c7522aa78fa7dd4446fd 292 Gene3D G3DSA:3.30.565.10 152 289 2.4E-17 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain smi_1072 14b740c79a03c7522aa78fa7dd4446fd 292 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 190 283 3.3E-7 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain smi_1072 14b740c79a03c7522aa78fa7dd4446fd 292 Pfam PF00512 His Kinase A (phospho-acceptor) domain 87 143 1.1E-8 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 smi_1072 14b740c79a03c7522aa78fa7dd4446fd 292 Gene3D G3DSA:1.10.287.130 77 141 2.2E-10 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 smi_0287 8a69d8d9db6558be7c23da6d779bbf20 150 Gene3D G3DSA:3.40.50.620 5 144 1.6E-38 T 26-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold smi_0287 8a69d8d9db6558be7c23da6d779bbf20 150 PANTHER PTHR31964 1 148 1.0E-36 T 26-04-2016 smi_0287 8a69d8d9db6558be7c23da6d779bbf20 150 SUPERFAMILY SSF52402 5 146 1.17E-30 T 26-04-2016 smi_0287 8a69d8d9db6558be7c23da6d779bbf20 150 Pfam PF00582 Universal stress protein family 5 144 2.1E-35 T 26-04-2016 IPR006016 UspA GO:0006950 smi_0287 8a69d8d9db6558be7c23da6d779bbf20 150 PANTHER PTHR31964:SF45 1 148 1.0E-36 T 26-04-2016 smi_0287 8a69d8d9db6558be7c23da6d779bbf20 150 PIRSF PIRSF006276 1 147 3.2E-19 T 26-04-2016 IPR006015 Universal stress protein A smi_0287 8a69d8d9db6558be7c23da6d779bbf20 150 PRINTS PR01438 Universal stress protein signature 5 23 7.4E-16 T 26-04-2016 IPR006015 Universal stress protein A smi_0287 8a69d8d9db6558be7c23da6d779bbf20 150 PRINTS PR01438 Universal stress protein signature 122 144 7.4E-16 T 26-04-2016 IPR006015 Universal stress protein A smi_0287 8a69d8d9db6558be7c23da6d779bbf20 150 PRINTS PR01438 Universal stress protein signature 104 116 7.4E-16 T 26-04-2016 IPR006015 Universal stress protein A smi_1559 9fa91021568afa1fc31baa6727dcd8ba 410 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 7 407 1.3E-192 T 26-04-2016 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 smi_1559 9fa91021568afa1fc31baa6727dcd8ba 410 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 3 410 51.212 T 26-04-2016 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 smi_1559 9fa91021568afa1fc31baa6727dcd8ba 410 SMART SM00994 10 49 1.8E-20 T 26-04-2016 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 smi_1559 9fa91021568afa1fc31baa6727dcd8ba 410 Pfam PF07724 AAA domain (Cdc48 subfamily) 111 306 1.2E-47 T 26-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 smi_1559 9fa91021568afa1fc31baa6727dcd8ba 410 PANTHER PTHR11262:SF4 4 407 2.1E-228 T 26-04-2016 smi_1559 9fa91021568afa1fc31baa6727dcd8ba 410 SUPERFAMILY SSF52540 59 395 2.11E-70 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1559 9fa91021568afa1fc31baa6727dcd8ba 410 SUPERFAMILY SSF57716 11 46 3.85E-11 T 26-04-2016 smi_1559 9fa91021568afa1fc31baa6727dcd8ba 410 Gene3D G3DSA:3.40.50.300 290 306 1.7E-47 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1559 9fa91021568afa1fc31baa6727dcd8ba 410 Gene3D G3DSA:3.40.50.300 63 253 1.7E-47 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1559 9fa91021568afa1fc31baa6727dcd8ba 410 PANTHER PTHR11262 4 407 2.1E-228 T 26-04-2016 smi_1559 9fa91021568afa1fc31baa6727dcd8ba 410 Gene3D G3DSA:1.10.8.60 312 408 1.6E-37 T 26-04-2016 smi_1559 9fa91021568afa1fc31baa6727dcd8ba 410 Pfam PF06689 ClpX C4-type zinc finger 12 48 1.6E-17 T 26-04-2016 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 smi_1559 9fa91021568afa1fc31baa6727dcd8ba 410 SMART SM00382 111 261 7.4E-10 T 26-04-2016 IPR003593 AAA+ ATPase domain smi_1559 9fa91021568afa1fc31baa6727dcd8ba 410 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 313 390 2.6E-19 T 26-04-2016 IPR019489 Clp ATPase, C-terminal smi_1559 9fa91021568afa1fc31baa6727dcd8ba 410 SMART SM01086 313 407 1.1E-33 T 26-04-2016 IPR019489 Clp ATPase, C-terminal smi_1728 ee4b4142a1e9ae36405fc3218b9bc218 152 Hamap MF_01151 Protein GrpE [grpE]. 2 152 11.642 T 26-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 smi_1728 ee4b4142a1e9ae36405fc3218b9bc218 152 Gene3D G3DSA:2.30.22.10 96 152 1.0E-16 T 26-04-2016 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 smi_1728 ee4b4142a1e9ae36405fc3218b9bc218 152 SUPERFAMILY SSF51064 105 152 2.62E-11 T 26-04-2016 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 smi_1728 ee4b4142a1e9ae36405fc3218b9bc218 152 PRINTS PR00773 GrpE protein signature 60 75 5.7E-9 T 26-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 smi_1728 ee4b4142a1e9ae36405fc3218b9bc218 152 PRINTS PR00773 GrpE protein signature 131 150 5.7E-9 T 26-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 smi_1728 ee4b4142a1e9ae36405fc3218b9bc218 152 PANTHER PTHR21237 81 152 3.7E-13 T 26-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 smi_1728 ee4b4142a1e9ae36405fc3218b9bc218 152 Pfam PF01025 GrpE 33 152 2.2E-18 T 26-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 smi_0238 881e1149f7d5e00351b4a6727a1db0a3 178 SMART SM00738 5 116 1.5E-50 T 26-04-2016 IPR006645 NusG, N-terminal GO:0006355 smi_0238 881e1149f7d5e00351b4a6727a1db0a3 178 SMART SM00739 126 153 1.2E-6 T 26-04-2016 IPR005824 KOW smi_0238 881e1149f7d5e00351b4a6727a1db0a3 178 Gene3D G3DSA:3.30.70.940 6 118 2.6E-43 T 26-04-2016 IPR006645 NusG, N-terminal GO:0006355 smi_0238 881e1149f7d5e00351b4a6727a1db0a3 178 PRINTS PR00338 Transcription termination factor NUSG signature 154 170 7.8E-7 T 26-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 smi_0238 881e1149f7d5e00351b4a6727a1db0a3 178 PRINTS PR00338 Transcription termination factor NUSG signature 60 72 7.8E-7 T 26-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 smi_0238 881e1149f7d5e00351b4a6727a1db0a3 178 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 5 178 22.285 T 26-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 smi_0238 881e1149f7d5e00351b4a6727a1db0a3 178 SUPERFAMILY SSF82679 6 117 1.01E-35 T 26-04-2016 IPR006645 NusG, N-terminal GO:0006355 smi_0238 881e1149f7d5e00351b4a6727a1db0a3 178 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 8 176 6.0E-50 T 26-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 smi_0238 881e1149f7d5e00351b4a6727a1db0a3 178 SUPERFAMILY SSF50104 124 177 1.43E-12 T 26-04-2016 IPR008991 Translation protein SH3-like domain smi_0238 881e1149f7d5e00351b4a6727a1db0a3 178 Pfam PF00467 KOW motif 129 158 5.7E-7 T 26-04-2016 IPR005824 KOW smi_0238 881e1149f7d5e00351b4a6727a1db0a3 178 PANTHER PTHR30265 1 178 1.4E-64 T 26-04-2016 smi_0238 881e1149f7d5e00351b4a6727a1db0a3 178 Gene3D G3DSA:2.30.30.30 121 177 2.6E-18 T 26-04-2016 IPR014722 Ribosomal protein L2 domain 2 smi_0238 881e1149f7d5e00351b4a6727a1db0a3 178 Pfam PF02357 Transcription termination factor nusG 6 113 2.6E-27 T 26-04-2016 IPR006645 NusG, N-terminal GO:0006355 smi_2060 8ce522b34ff968fe3307d47233a55644 308 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 33 51 - T 26-04-2016 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 smi_2060 8ce522b34ff968fe3307d47233a55644 308 PANTHER PTHR10314 3 305 2.9E-141 T 26-04-2016 smi_2060 8ce522b34ff968fe3307d47233a55644 308 PANTHER PTHR10314:SF110 3 305 2.9E-141 T 26-04-2016 smi_2060 8ce522b34ff968fe3307d47233a55644 308 SUPERFAMILY SSF53686 2 304 1.31E-96 T 26-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme smi_2060 8ce522b34ff968fe3307d47233a55644 308 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 7 292 3.8E-66 T 26-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme smi_2060 8ce522b34ff968fe3307d47233a55644 308 TIGRFAM TIGR01136 cysKM: cysteine synthase 7 304 9.0E-123 T 26-04-2016 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 smi_2060 8ce522b34ff968fe3307d47233a55644 308 Gene3D G3DSA:3.40.50.1100 43 141 6.0E-43 T 26-04-2016 smi_2060 8ce522b34ff968fe3307d47233a55644 308 Gene3D G3DSA:3.40.50.1100 149 305 4.6E-66 T 26-04-2016 smi_2060 8ce522b34ff968fe3307d47233a55644 308 Gene3D G3DSA:3.40.50.1100 1 42 4.6E-66 T 26-04-2016 smi_2060 8ce522b34ff968fe3307d47233a55644 308 TIGRFAM TIGR01139 cysK: cysteine synthase A 7 304 1.0E-129 T 26-04-2016 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 smi_1842 3a5b9aad4ba474acc2cd9a9879c3be64 172 SUPERFAMILY SSF55729 5 171 3.16E-28 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase smi_1842 3a5b9aad4ba474acc2cd9a9879c3be64 172 Gene3D G3DSA:3.40.630.30 5 170 8.5E-41 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase smi_1842 3a5b9aad4ba474acc2cd9a9879c3be64 172 Pfam PF00583 Acetyltransferase (GNAT) family 66 144 1.1E-16 T 26-04-2016 IPR000182 GNAT domain GO:0008080 smi_1842 3a5b9aad4ba474acc2cd9a9879c3be64 172 PANTHER PTHR23091 4 172 4.5E-22 T 26-04-2016 smi_1404 c2876bfc738deb0560dc0318772a0c20 726 PANTHER PTHR30009:SF8 12 561 0.0 T 26-04-2016 smi_1404 c2876bfc738deb0560dc0318772a0c20 726 Gene3D G3DSA:2.70.70.10 575 724 7.2E-61 T 26-04-2016 smi_1404 c2876bfc738deb0560dc0318772a0c20 726 TIGRFAM TIGR02003 PTS-II-BC-unk1: PTS system, IIBC component 9 551 1.1E-285 T 26-04-2016 IPR011300 Phosphotransferase system, IIBC component KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- smi_1404 c2876bfc738deb0560dc0318772a0c20 726 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 579 702 4.3E-51 T 26-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- smi_1404 c2876bfc738deb0560dc0318772a0c20 726 SUPERFAMILY SSF55604 475 549 1.57E-19 T 26-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 smi_1404 c2876bfc738deb0560dc0318772a0c20 726 Gene3D G3DSA:3.30.1360.60 474 550 1.2E-25 T 26-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 smi_1404 c2876bfc738deb0560dc0318772a0c20 726 Pfam PF02378 Phosphotransferase system, EIIC 19 382 7.6E-49 T 26-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 smi_1404 c2876bfc738deb0560dc0318772a0c20 726 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 581 700 1.2E-42 T 26-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- smi_1404 c2876bfc738deb0560dc0318772a0c20 726 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 443 535 1.2E-16 T 26-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 smi_1404 c2876bfc738deb0560dc0318772a0c20 726 SUPERFAMILY SSF51261 577 718 2.79E-52 T 26-04-2016 IPR011055 Duplicated hybrid motif smi_1404 c2876bfc738deb0560dc0318772a0c20 726 PANTHER PTHR30009 12 561 0.0 T 26-04-2016 smi_1404 c2876bfc738deb0560dc0318772a0c20 726 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 488 505 - T 26-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 smi_1404 c2876bfc738deb0560dc0318772a0c20 726 Pfam PF00367 phosphotransferase system, EIIB 478 509 2.3E-14 T 26-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 smi_1404 c2876bfc738deb0560dc0318772a0c20 726 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 642 654 - T 26-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- smi_1767 ae01c7eaaaa431e2477b0d7b9c83dfc4 750 Pfam PF00905 Penicillin binding protein transpeptidase domain 289 606 2.9E-70 T 26-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 smi_1767 ae01c7eaaaa431e2477b0d7b9c83dfc4 750 SUPERFAMILY SSF56601 264 626 2.82E-77 T 26-04-2016 IPR012338 Beta-lactamase/transpeptidase-like smi_1767 ae01c7eaaaa431e2477b0d7b9c83dfc4 750 SUPERFAMILY SSF54184 695 749 1.11E-12 T 26-04-2016 smi_1767 ae01c7eaaaa431e2477b0d7b9c83dfc4 750 PANTHER PTHR30627:SF1 8 647 5.8E-172 T 26-04-2016 smi_1767 ae01c7eaaaa431e2477b0d7b9c83dfc4 750 SUPERFAMILY SSF56519 68 263 1.12E-46 T 26-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 smi_1767 ae01c7eaaaa431e2477b0d7b9c83dfc4 750 SUPERFAMILY SSF54184 633 691 1.96E-14 T 26-04-2016 smi_1767 ae01c7eaaaa431e2477b0d7b9c83dfc4 750 Gene3D G3DSA:3.40.710.10 271 610 1.6E-73 T 26-04-2016 IPR012338 Beta-lactamase/transpeptidase-like smi_1767 ae01c7eaaaa431e2477b0d7b9c83dfc4 750 Pfam PF03793 PASTA domain 695 749 8.3E-6 T 26-04-2016 IPR005543 PASTA domain smi_1767 ae01c7eaaaa431e2477b0d7b9c83dfc4 750 SMART SM00740 690 750 2.6E-12 T 26-04-2016 IPR005543 PASTA domain smi_1767 ae01c7eaaaa431e2477b0d7b9c83dfc4 750 Pfam PF03717 Penicillin-binding Protein dimerisation domain 72 245 2.2E-28 T 26-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 smi_1767 ae01c7eaaaa431e2477b0d7b9c83dfc4 750 PANTHER PTHR30627 8 647 5.8E-172 T 26-04-2016 smi_1767 ae01c7eaaaa431e2477b0d7b9c83dfc4 750 Gene3D G3DSA:3.90.1310.10 165 270 1.1E-33 T 26-04-2016 smi_2089 b4315c22d377d4e8b56c1457f5ef26f4 252 Pfam PF02195 ParB-like nuclease domain 6 94 2.0E-26 T 26-04-2016 IPR003115 ParB/Sulfiredoxin smi_2089 b4315c22d377d4e8b56c1457f5ef26f4 252 SUPERFAMILY SSF109709 87 194 2.62E-33 T 26-04-2016 smi_2089 b4315c22d377d4e8b56c1457f5ef26f4 252 Gene3D G3DSA:3.90.1530.10 2 101 2.0E-37 T 26-04-2016 smi_2089 b4315c22d377d4e8b56c1457f5ef26f4 252 PANTHER PTHR33375 2 252 1.9E-127 T 26-04-2016 smi_2089 b4315c22d377d4e8b56c1457f5ef26f4 252 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 2 173 9.9E-58 T 26-04-2016 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 smi_2089 b4315c22d377d4e8b56c1457f5ef26f4 252 PANTHER PTHR33375:SF3 2 252 1.9E-127 T 26-04-2016 smi_2089 b4315c22d377d4e8b56c1457f5ef26f4 252 SMART SM00470 5 95 1.3E-34 T 26-04-2016 IPR003115 ParB/Sulfiredoxin smi_2089 b4315c22d377d4e8b56c1457f5ef26f4 252 SUPERFAMILY SSF110849 5 97 1.41E-27 T 26-04-2016 IPR003115 ParB/Sulfiredoxin smi_2031 14f4cf0eebf00a1b8020eb617055f43e 516 Gene3D G3DSA:3.30.300.30 406 512 1.2E-22 T 26-04-2016 smi_2031 14f4cf0eebf00a1b8020eb617055f43e 516 ProSitePatterns PS00455 Putative AMP-binding domain signature. 153 164 - T 26-04-2016 IPR020845 AMP-binding, conserved site smi_2031 14f4cf0eebf00a1b8020eb617055f43e 516 Pfam PF13193 AMP-binding enzyme C-terminal domain 425 503 1.8E-5 T 26-04-2016 IPR025110 AMP-binding enzyme C-terminal domain smi_2031 14f4cf0eebf00a1b8020eb617055f43e 516 Gene3D G3DSA:2.30.38.10 326 399 8.9E-19 T 26-04-2016 smi_2031 14f4cf0eebf00a1b8020eb617055f43e 516 Gene3D G3DSA:3.40.50.980 160 317 1.8E-35 T 26-04-2016 smi_2031 14f4cf0eebf00a1b8020eb617055f43e 516 SUPERFAMILY SSF56801 10 512 1.31E-110 T 26-04-2016 smi_2031 14f4cf0eebf00a1b8020eb617055f43e 516 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 34 435 7.1E-105 T 26-04-2016 IPR010071 Amino acid adenylation domain smi_2031 14f4cf0eebf00a1b8020eb617055f43e 516 TIGRFAM TIGR01734 D-ala-DACP-lig: D-alanine--poly(phosphoribitol) ligase, subunit 1 8 515 8.4E-245 T 26-04-2016 IPR010072 D-alanine--poly(phosphoribitol) ligase subunit 1 GO:0005524|GO:0047473|GO:0070395 KEGG: 00473+6.1.1.13|UniPathway: UPA00556 smi_2031 14f4cf0eebf00a1b8020eb617055f43e 516 PANTHER PTHR24095 8 503 1.6E-158 T 26-04-2016 smi_2031 14f4cf0eebf00a1b8020eb617055f43e 516 Hamap MF_00593 D-alanine--poly(phosphoribitol) ligase subunit 1 [dltA]. 1 515 280.5 T 26-04-2016 IPR010072 D-alanine--poly(phosphoribitol) ligase subunit 1 GO:0005524|GO:0047473|GO:0070395 KEGG: 00473+6.1.1.13|UniPathway: UPA00556 smi_2031 14f4cf0eebf00a1b8020eb617055f43e 516 Pfam PF00501 AMP-binding enzyme 14 411 2.6E-79 T 26-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 smi_2031 14f4cf0eebf00a1b8020eb617055f43e 516 Gene3D G3DSA:3.40.50.980 9 159 6.7E-30 T 26-04-2016 smi_1317 37036eb89fd9e76b090bab49c72b383e 779 Gene3D G3DSA:3.10.20.320 466 559 1.7E-6 T 26-04-2016 IPR009459 MucBP domain smi_1317 37036eb89fd9e76b090bab49c72b383e 779 SMART SM01208 546 619 0.0059 T 26-04-2016 IPR011098 G5 domain smi_1317 37036eb89fd9e76b090bab49c72b383e 779 SMART SM01208 621 692 1.4E-7 T 26-04-2016 IPR011098 G5 domain smi_1317 37036eb89fd9e76b090bab49c72b383e 779 Pfam PF07501 G5 domain 547 618 1.2E-5 T 26-04-2016 IPR011098 G5 domain smi_1317 37036eb89fd9e76b090bab49c72b383e 779 Pfam PF07501 G5 domain 621 691 1.0E-8 T 26-04-2016 IPR011098 G5 domain smi_1317 37036eb89fd9e76b090bab49c72b383e 779 Pfam PF00746 Gram positive anchor 737 770 4.6E-6 T 26-04-2016 IPR019948 Gram-positive anchor smi_1317 37036eb89fd9e76b090bab49c72b383e 779 TIGRFAM TIGR01167 LPXTG_anchor: LPXTG cell wall anchor domain 743 776 1.0E-6 T 26-04-2016 IPR019931 LPXTG cell wall anchor domain smi_1516 3163bc90fc5b1cf34eb5edc0108ce1b2 311 Hamap MF_00207 Probable manganese-dependent inorganic pyrophosphatase [ppaC]. 3 311 45.923 T 26-04-2016 IPR022934 Manganese-dependent inorganic pyrophosphatase, probable GO:0004427 KEGG: 00190+3.6.1.1 smi_1516 3163bc90fc5b1cf34eb5edc0108ce1b2 311 PANTHER PTHR12112:SF17 4 311 4.4E-122 T 26-04-2016 smi_1516 3163bc90fc5b1cf34eb5edc0108ce1b2 311 SUPERFAMILY SSF64182 3 309 4.32E-83 T 26-04-2016 smi_1516 3163bc90fc5b1cf34eb5edc0108ce1b2 311 SMART SM01131 183 309 2.6E-59 T 26-04-2016 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1 smi_1516 3163bc90fc5b1cf34eb5edc0108ce1b2 311 Pfam PF02833 DHHA2 domain 185 307 5.4E-18 T 26-04-2016 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1 smi_1516 3163bc90fc5b1cf34eb5edc0108ce1b2 311 PANTHER PTHR12112 4 311 4.4E-122 T 26-04-2016 smi_1516 3163bc90fc5b1cf34eb5edc0108ce1b2 311 Gene3D G3DSA:3.90.1640.10 2 189 1.1E-60 T 26-04-2016 smi_1516 3163bc90fc5b1cf34eb5edc0108ce1b2 311 Pfam PF01368 DHH family 3 147 4.1E-24 T 26-04-2016 IPR001667 DDH domain smi_0982 6b9cf3d9dfad2d988c2682ce347668c3 237 Pfam PF01596 O-methyltransferase 36 226 2.3E-29 T 26-04-2016 IPR002935 O-methyltransferase, family 3 GO:0008171 smi_0982 6b9cf3d9dfad2d988c2682ce347668c3 237 PANTHER PTHR10509:SF14 13 233 2.0E-75 T 26-04-2016 smi_0982 6b9cf3d9dfad2d988c2682ce347668c3 237 Gene3D G3DSA:3.40.50.150 8 226 9.7E-59 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase smi_0982 6b9cf3d9dfad2d988c2682ce347668c3 237 PANTHER PTHR10509 13 233 2.0E-75 T 26-04-2016 smi_0982 6b9cf3d9dfad2d988c2682ce347668c3 237 SUPERFAMILY SSF53335 2 223 6.21E-47 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase smi_0379 055da3e3656f15d40444b78d57531d9a 933 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 437 594 2.3E-35 T 26-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 smi_0379 055da3e3656f15d40444b78d57531d9a 933 Pfam PF00009 Elongation factor Tu GTP binding domain 440 596 1.8E-34 T 26-04-2016 smi_0379 055da3e3656f15d40444b78d57531d9a 933 Pfam PF11987 Translation-initiation factor 2 720 825 1.0E-37 T 26-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 smi_0379 055da3e3656f15d40444b78d57531d9a 933 ProSitePatterns PS01176 Initiation factor 2 signature. 886 908 - T 26-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 smi_0379 055da3e3656f15d40444b78d57531d9a 933 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 3 933 16.982 T 26-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 smi_0379 055da3e3656f15d40444b78d57531d9a 933 PANTHER PTHR23115:SF184 783 931 8.3E-200 T 26-04-2016 smi_0379 055da3e3656f15d40444b78d57531d9a 933 PANTHER PTHR23115:SF184 420 759 8.3E-200 T 26-04-2016 smi_0379 055da3e3656f15d40444b78d57531d9a 933 SUPERFAMILY SSF50447 836 933 4.16E-29 T 26-04-2016 IPR009000 Translation protein, beta-barrel domain smi_0379 055da3e3656f15d40444b78d57531d9a 933 Gene3D G3DSA:3.40.50.10050 735 814 1.1E-27 T 26-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 smi_0379 055da3e3656f15d40444b78d57531d9a 933 SUPERFAMILY SSF52156 712 842 7.72E-40 T 26-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 smi_0379 055da3e3656f15d40444b78d57531d9a 933 Gene3D G3DSA:2.40.30.10 837 933 7.3E-35 T 26-04-2016 smi_0379 055da3e3656f15d40444b78d57531d9a 933 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 349 933 4.6E-248 T 26-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 smi_0379 055da3e3656f15d40444b78d57531d9a 933 SUPERFAMILY SSF52540 427 608 9.5E-54 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0379 055da3e3656f15d40444b78d57531d9a 933 SUPERFAMILY SSF50447 610 690 2.64E-22 T 26-04-2016 IPR009000 Translation protein, beta-barrel domain smi_0379 055da3e3656f15d40444b78d57531d9a 933 PANTHER PTHR23115 783 931 8.3E-200 T 26-04-2016 smi_0379 055da3e3656f15d40444b78d57531d9a 933 PANTHER PTHR23115 420 759 8.3E-200 T 26-04-2016 smi_0379 055da3e3656f15d40444b78d57531d9a 933 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 355 406 1.2E-13 T 26-04-2016 IPR006847 Translation initiation factor IF-2, N-terminal smi_0379 055da3e3656f15d40444b78d57531d9a 933 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 2 51 2.7E-15 T 26-04-2016 IPR006847 Translation initiation factor IF-2, N-terminal smi_0379 055da3e3656f15d40444b78d57531d9a 933 Gene3D G3DSA:3.40.50.300 434 595 6.2E-48 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0379 055da3e3656f15d40444b78d57531d9a 933 Gene3D G3DSA:2.40.30.10 610 697 6.0E-21 T 26-04-2016 smi_1096 f5b89f9a8214e2558f7d3dec9cf23dc2 234 Gene3D G3DSA:3.40.50.1000 83 210 2.3E-31 T 26-04-2016 IPR023214 HAD-like domain smi_1096 f5b89f9a8214e2558f7d3dec9cf23dc2 234 Pfam PF12710 haloacid dehalogenase-like hydrolase 7 188 4.0E-18 T 26-04-2016 smi_1096 f5b89f9a8214e2558f7d3dec9cf23dc2 234 PANTHER PTHR10000:SF11 5 229 9.5E-54 T 26-04-2016 smi_1096 f5b89f9a8214e2558f7d3dec9cf23dc2 234 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 6 190 6.4E-28 T 26-04-2016 IPR006383 HAD-superfamily hydrolase, subfamily IB, PSPase-like GO:0008152|GO:0016791 smi_1096 f5b89f9a8214e2558f7d3dec9cf23dc2 234 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 6 202 7.4E-43 T 26-04-2016 IPR006385 HAD-superfamily hydrolase, subfamily IB, PSPase-like, bacterial smi_1096 f5b89f9a8214e2558f7d3dec9cf23dc2 234 PANTHER PTHR10000 5 229 9.5E-54 T 26-04-2016 smi_1096 f5b89f9a8214e2558f7d3dec9cf23dc2 234 SUPERFAMILY SSF56784 7 203 3.03E-23 T 26-04-2016 IPR023214 HAD-like domain smi_1188 5b4b5675a5d36fcbd562e5b643e64e27 213 Gene3D G3DSA:3.40.50.720 80 212 2.5E-48 T 26-04-2016 IPR016040 NAD(P)-binding domain smi_1188 5b4b5675a5d36fcbd562e5b643e64e27 213 PANTHER PTHR35786:SF1 2 213 3.8E-106 T 26-04-2016 smi_1188 5b4b5675a5d36fcbd562e5b643e64e27 213 SUPERFAMILY SSF46785 9 80 4.62E-20 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain smi_1188 5b4b5675a5d36fcbd562e5b643e64e27 213 SUPERFAMILY SSF51735 84 210 7.87E-24 T 26-04-2016 IPR016040 NAD(P)-binding domain smi_1188 5b4b5675a5d36fcbd562e5b643e64e27 213 Gene3D G3DSA:1.10.10.10 7 77 9.9E-30 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain smi_1188 5b4b5675a5d36fcbd562e5b643e64e27 213 PANTHER PTHR35786 2 213 3.8E-106 T 26-04-2016 smi_1188 5b4b5675a5d36fcbd562e5b643e64e27 213 Pfam PF06971 Putative DNA-binding protein N-terminus 8 55 7.6E-17 T 26-04-2016 IPR009718 Rex DNA-binding, C-terminal domain GO:0005737|GO:0045892|GO:0051775 smi_1188 5b4b5675a5d36fcbd562e5b643e64e27 213 Hamap MF_01131 Redox-sensing transcriptional repressor Rex [rex]. 3 213 38.437 T 26-04-2016 IPR022876 Redox-sensing transcriptional repressor Rex GO:0005737|GO:0045892|GO:0051775 smi_1188 5b4b5675a5d36fcbd562e5b643e64e27 213 SMART SM00881 81 184 2.9E-11 T 26-04-2016 IPR003781 CoA-binding GO:0048037 smi_1188 5b4b5675a5d36fcbd562e5b643e64e27 213 Pfam PF02629 CoA binding domain 84 183 5.2E-25 T 26-04-2016 IPR003781 CoA-binding GO:0048037 smi_0684 35a616b362e4416498f3e6e17b17c288 113 SUPERFAMILY SSF54913 1 113 1.37E-36 T 26-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta smi_0684 35a616b362e4416498f3e6e17b17c288 113 ProSitePatterns PS00638 P-II protein C-terminal region signature. 84 97 - T 26-04-2016 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 smi_0684 35a616b362e4416498f3e6e17b17c288 113 Pfam PF00543 Nitrogen regulatory protein P-II 4 106 2.8E-36 T 26-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 smi_0684 35a616b362e4416498f3e6e17b17c288 113 Gene3D G3DSA:3.30.70.120 1 113 4.8E-41 T 26-04-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal smi_0684 35a616b362e4416498f3e6e17b17c288 113 PRINTS PR00340 P-II protein signature 2 17 9.97E-25 T 26-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 smi_0684 35a616b362e4416498f3e6e17b17c288 113 PRINTS PR00340 P-II protein signature 84 104 9.97E-25 T 26-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 smi_0684 35a616b362e4416498f3e6e17b17c288 113 PRINTS PR00340 P-II protein signature 53 76 9.97E-25 T 26-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 smi_0684 35a616b362e4416498f3e6e17b17c288 113 PANTHER PTHR30115 1 113 1.6E-44 T 26-04-2016 smi_0684 35a616b362e4416498f3e6e17b17c288 113 SMART SM00938 4 106 5.3E-44 T 26-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 smi_1580 ae390a64275d1875444f4e2d50c313f4 277 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 4 207 6.2E-20 T 26-04-2016 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type smi_1580 ae390a64275d1875444f4e2d50c313f4 277 SUPERFAMILY SSF56300 1 240 2.05E-50 T 26-04-2016 IPR029052 Metallo-dependent phosphatase-like smi_1580 ae390a64275d1875444f4e2d50c313f4 277 PIRSF PIRSF000883 3 251 3.2E-77 T 26-04-2016 IPR011152 Phosphoesterase MJ0912 smi_1580 ae390a64275d1875444f4e2d50c313f4 277 PANTHER PTHR11124 106 275 1.9E-94 T 26-04-2016 IPR000979 Phosphodiesterase MJ0936/Vps29 smi_1580 ae390a64275d1875444f4e2d50c313f4 277 PANTHER PTHR11124 1 75 1.9E-94 T 26-04-2016 IPR000979 Phosphodiesterase MJ0936/Vps29 smi_1580 ae390a64275d1875444f4e2d50c313f4 277 Gene3D G3DSA:3.60.21.10 4 244 6.2E-58 T 26-04-2016 IPR029052 Metallo-dependent phosphatase-like smi_1580 ae390a64275d1875444f4e2d50c313f4 277 PANTHER PTHR11124:SF2 106 275 1.9E-94 T 26-04-2016 smi_1580 ae390a64275d1875444f4e2d50c313f4 277 PANTHER PTHR11124:SF2 1 75 1.9E-94 T 26-04-2016 smi_1734 a186178e048ea00211dd420a50887490 182 Pfam PF02674 Colicin V production protein 2 164 1.0E-29 T 26-04-2016 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 smi_1734 a186178e048ea00211dd420a50887490 182 PANTHER PTHR37306 1 180 3.6E-39 T 26-04-2016 smi_1734 a186178e048ea00211dd420a50887490 182 PANTHER PTHR37306:SF1 1 180 3.6E-39 T 26-04-2016 smi_1567 cf43f5f23ee34587628597d92e4cd253 170 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 3 170 38.254 T 26-04-2016 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|UniPathway: UPA00588 smi_1567 cf43f5f23ee34587628597d92e4cd253 170 Pfam PF00156 Phosphoribosyl transferase domain 37 166 1.9E-17 T 26-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 smi_1567 cf43f5f23ee34587628597d92e4cd253 170 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 3 170 4.6E-68 T 26-04-2016 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|UniPathway: UPA00588 smi_1567 cf43f5f23ee34587628597d92e4cd253 170 SUPERFAMILY SSF53271 2 167 1.06E-50 T 26-04-2016 IPR029057 Phosphoribosyltransferase-like smi_1567 cf43f5f23ee34587628597d92e4cd253 170 Gene3D G3DSA:3.40.50.2020 2 168 9.2E-66 T 26-04-2016 IPR029057 Phosphoribosyltransferase-like smi_1567 cf43f5f23ee34587628597d92e4cd253 170 PANTHER PTHR32315 3 170 4.1E-77 T 26-04-2016 smi_0349 0f8aca0c01a8b0a884ab7f86e4ba5e0b 448 Pfam PF00120 Glutamine synthetase, catalytic domain 107 444 2.8E-137 T 26-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 smi_0349 0f8aca0c01a8b0a884ab7f86e4ba5e0b 448 PANTHER PTHR20852 1 448 7.3E-190 T 26-04-2016 smi_0349 0f8aca0c01a8b0a884ab7f86e4ba5e0b 448 SUPERFAMILY SSF54368 4 105 1.7E-29 T 26-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 smi_0349 0f8aca0c01a8b0a884ab7f86e4ba5e0b 448 SMART SM01230 106 358 1.8E-130 T 26-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 smi_0349 0f8aca0c01a8b0a884ab7f86e4ba5e0b 448 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 8 446 1.2E-167 T 26-04-2016 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 smi_0349 0f8aca0c01a8b0a884ab7f86e4ba5e0b 448 ProSitePatterns PS00180 Glutamine synthetase signature 1. 53 71 - T 26-04-2016 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 smi_0349 0f8aca0c01a8b0a884ab7f86e4ba5e0b 448 PANTHER PTHR20852:SF7 1 448 7.3E-190 T 26-04-2016 smi_0349 0f8aca0c01a8b0a884ab7f86e4ba5e0b 448 Gene3D G3DSA:3.30.590.10 110 434 5.5E-123 T 26-04-2016 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Reactome: REACT_13 smi_0349 0f8aca0c01a8b0a884ab7f86e4ba5e0b 448 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 16 99 3.1E-28 T 26-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 smi_0349 0f8aca0c01a8b0a884ab7f86e4ba5e0b 448 Gene3D G3DSA:3.10.20.70 5 109 1.3E-37 T 26-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 smi_0349 0f8aca0c01a8b0a884ab7f86e4ba5e0b 448 SUPERFAMILY SSF55931 107 446 2.35E-123 T 26-04-2016 smi_1546 3fccfa693ed2ce3a0d5ed111f42abaf7 399 SUPERFAMILY SSF81301 10 143 2.83E-42 T 26-04-2016 smi_1546 3fccfa693ed2ce3a0d5ed111f42abaf7 399 Hamap MF_01263 CCA-adding enzyme [cca]. 7 399 43.363 T 26-04-2016 IPR023068 CCA-adding enzyme, firmicutes GO:0001680|GO:0004810|GO:0016437 smi_1546 3fccfa693ed2ce3a0d5ed111f42abaf7 399 Pfam PF13735 tRNA nucleotidyltransferase domain 2 putative 249 393 2.9E-48 T 26-04-2016 IPR032810 CCA-adding enzyme, C-terminal smi_1546 3fccfa693ed2ce3a0d5ed111f42abaf7 399 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 174 233 2.0E-17 T 26-04-2016 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain smi_1546 3fccfa693ed2ce3a0d5ed111f42abaf7 399 Gene3D G3DSA:3.30.460.10 11 147 1.6E-47 T 26-04-2016 smi_1546 3fccfa693ed2ce3a0d5ed111f42abaf7 399 PANTHER PTHR13734 1 282 1.3E-72 T 26-04-2016 smi_1546 3fccfa693ed2ce3a0d5ed111f42abaf7 399 SUPERFAMILY SSF81891 145 397 3.4E-55 T 26-04-2016 smi_1546 3fccfa693ed2ce3a0d5ed111f42abaf7 399 Pfam PF01743 Poly A polymerase head domain 27 147 1.6E-36 T 26-04-2016 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 smi_1546 3fccfa693ed2ce3a0d5ed111f42abaf7 399 Gene3D G3DSA:1.10.3090.10 148 366 3.0E-49 T 26-04-2016 smi_0295 8521c5a6e7a31ae238f8ac049aa77b14 290 SMART SM00650 34 210 1.3E-87 T 26-04-2016 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 smi_0295 8521c5a6e7a31ae238f8ac049aa77b14 290 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 18 284 2.1E-85 T 26-04-2016 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 smi_0295 8521c5a6e7a31ae238f8ac049aa77b14 290 Pfam PF00398 Ribosomal RNA adenine dimethylase 18 249 7.2E-66 T 26-04-2016 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm smi_0295 8521c5a6e7a31ae238f8ac049aa77b14 290 Gene3D G3DSA:3.40.50.150 3 211 1.5E-75 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase smi_0295 8521c5a6e7a31ae238f8ac049aa77b14 290 Gene3D G3DSA:1.10.8.100 214 286 4.9E-24 T 26-04-2016 IPR023165 rRNA adenine dimethylase-like smi_0295 8521c5a6e7a31ae238f8ac049aa77b14 290 SUPERFAMILY SSF53335 15 286 5.03E-78 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase smi_0295 8521c5a6e7a31ae238f8ac049aa77b14 290 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 50 77 - T 26-04-2016 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 smi_0295 8521c5a6e7a31ae238f8ac049aa77b14 290 PANTHER PTHR11727 1 285 7.2E-96 T 26-04-2016 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm smi_0295 8521c5a6e7a31ae238f8ac049aa77b14 290 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 18 286 57.61 T 26-04-2016 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 smi_0743 18841278e802837650186d713e4db1f5 385 Gene3D G3DSA:3.40.50.300 3 238 3.0E-82 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0743 18841278e802837650186d713e4db1f5 385 PANTHER PTHR24220:SF150 7 381 2.4E-179 T 26-04-2016 smi_0743 18841278e802837650186d713e4db1f5 385 Pfam PF00005 ABC transporter 23 165 2.0E-35 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 smi_0743 18841278e802837650186d713e4db1f5 385 SUPERFAMILY SSF52540 5 248 4.37E-85 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0743 18841278e802837650186d713e4db1f5 385 Pfam PF08402 TOBE domain 276 344 9.1E-6 T 26-04-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 smi_0743 18841278e802837650186d713e4db1f5 385 SUPERFAMILY SSF50331 240 345 7.37E-13 T 26-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal smi_0743 18841278e802837650186d713e4db1f5 385 PANTHER PTHR24220 7 381 2.4E-179 T 26-04-2016 smi_0743 18841278e802837650186d713e4db1f5 385 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 26-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 smi_0743 18841278e802837650186d713e4db1f5 385 SMART SM00382 32 215 2.3E-15 T 26-04-2016 IPR003593 AAA+ ATPase domain smi_1425 012531dd4e4beb8e06d2dd7519058c25 246 Gene3D G3DSA:1.10.1660.10 1 55 3.7E-26 T 26-04-2016 smi_1425 012531dd4e4beb8e06d2dd7519058c25 246 PANTHER PTHR30204:SF1 1 243 8.6E-139 T 26-04-2016 smi_1425 012531dd4e4beb8e06d2dd7519058c25 246 SUPERFAMILY SSF89082 155 243 6.28E-22 T 26-04-2016 IPR012925 TipAS antibiotic-recognition domain smi_1425 012531dd4e4beb8e06d2dd7519058c25 246 Gene3D G3DSA:1.10.1660.10 56 107 4.1E-11 T 26-04-2016 smi_1425 012531dd4e4beb8e06d2dd7519058c25 246 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 14 27 1.2E-5 T 26-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 smi_1425 012531dd4e4beb8e06d2dd7519058c25 246 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 1.2E-5 T 26-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 smi_1425 012531dd4e4beb8e06d2dd7519058c25 246 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 3 14 1.2E-5 T 26-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 smi_1425 012531dd4e4beb8e06d2dd7519058c25 246 PANTHER PTHR30204 1 243 8.6E-139 T 26-04-2016 smi_1425 012531dd4e4beb8e06d2dd7519058c25 246 Pfam PF07739 TipAS antibiotic-recognition domain 129 240 1.8E-22 T 26-04-2016 IPR012925 TipAS antibiotic-recognition domain smi_1425 012531dd4e4beb8e06d2dd7519058c25 246 Pfam PF13411 MerR HTH family regulatory protein 2 69 2.4E-19 T 26-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 smi_1425 012531dd4e4beb8e06d2dd7519058c25 246 SUPERFAMILY SSF46955 2 111 2.16E-29 T 26-04-2016 IPR009061 Putative DNA-binding domain smi_1425 012531dd4e4beb8e06d2dd7519058c25 246 SMART SM00422 2 70 8.8E-27 T 26-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 smi_1425 012531dd4e4beb8e06d2dd7519058c25 246 Gene3D G3DSA:1.10.490.50 155 244 3.0E-28 T 26-04-2016 IPR012925 TipAS antibiotic-recognition domain smi_0004 225e7399f2cc86eec212f676eb1adb26 371 PIRSF PIRSF006641 1 371 4.9E-155 T 26-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 smi_0004 225e7399f2cc86eec212f676eb1adb26 371 Pfam PF06071 Protein of unknown function (DUF933) 287 370 1.1E-40 T 26-04-2016 IPR013029 Domain of unknown function DUF933 smi_0004 225e7399f2cc86eec212f676eb1adb26 371 Gene3D G3DSA:1.10.150.300 135 205 1.0E-30 T 26-04-2016 IPR023192 TGS-like domain smi_0004 225e7399f2cc86eec212f676eb1adb26 371 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 371 44.002 T 26-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 smi_0004 225e7399f2cc86eec212f676eb1adb26 371 PANTHER PTHR23305:SF12 1 371 8.5E-207 T 26-04-2016 smi_0004 225e7399f2cc86eec212f676eb1adb26 371 PANTHER PTHR23305 1 371 8.5E-207 T 26-04-2016 smi_0004 225e7399f2cc86eec212f676eb1adb26 371 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 5.3E-36 T 26-04-2016 IPR006073 GTP binding domain GO:0005525 smi_0004 225e7399f2cc86eec212f676eb1adb26 371 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 85 5.3E-36 T 26-04-2016 IPR006073 GTP binding domain GO:0005525 smi_0004 225e7399f2cc86eec212f676eb1adb26 371 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 5.3E-36 T 26-04-2016 IPR006073 GTP binding domain GO:0005525 smi_0004 225e7399f2cc86eec212f676eb1adb26 371 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 5.3E-36 T 26-04-2016 IPR006073 GTP binding domain GO:0005525 smi_0004 225e7399f2cc86eec212f676eb1adb26 371 SUPERFAMILY SSF81271 287 371 6.32E-36 T 26-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 smi_0004 225e7399f2cc86eec212f676eb1adb26 371 Gene3D G3DSA:3.10.20.30 275 371 5.2E-50 T 26-04-2016 IPR012675 Beta-grasp domain smi_0004 225e7399f2cc86eec212f676eb1adb26 371 SUPERFAMILY SSF52540 3 309 8.68E-85 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0004 225e7399f2cc86eec212f676eb1adb26 371 Gene3D G3DSA:3.40.50.300 206 274 2.1E-47 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0004 225e7399f2cc86eec212f676eb1adb26 371 Gene3D G3DSA:3.40.50.300 4 134 2.1E-47 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0004 225e7399f2cc86eec212f676eb1adb26 371 Pfam PF01926 50S ribosome-binding GTPase 5 113 1.1E-23 T 26-04-2016 IPR006073 GTP binding domain GO:0005525 smi_0004 225e7399f2cc86eec212f676eb1adb26 371 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 371 9.6E-148 T 26-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 smi_1129 2254d77add595a446719f5abd9a7130d 199 PANTHER PTHR11441 1 197 1.9E-73 T 26-04-2016 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199 smi_1129 2254d77add595a446719f5abd9a7130d 199 Gene3D G3DSA:3.30.60.20 140 188 4.0E-21 T 26-04-2016 smi_1129 2254d77add595a446719f5abd9a7130d 199 Gene3D G3DSA:3.40.50.300 13 120 1.6E-5 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1129 2254d77add595a446719f5abd9a7130d 199 PIRSF PIRSF035805 1 199 1.4E-59 T 26-04-2016 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199 smi_1129 2254d77add595a446719f5abd9a7130d 199 Pfam PF00265 Thymidine kinase 3 184 1.6E-50 T 26-04-2016 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199 smi_1129 2254d77add595a446719f5abd9a7130d 199 Hamap MF_00124 Thymidine kinase [tdk]. 1 187 34.44 T 26-04-2016 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199 smi_1129 2254d77add595a446719f5abd9a7130d 199 SUPERFAMILY SSF52540 1 139 1.18E-38 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1129 2254d77add595a446719f5abd9a7130d 199 ProSitePatterns PS00603 Thymidine kinase cellular-type signature. 171 184 - T 26-04-2016 IPR020633 Thymidine kinase, conserved site GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199 smi_1129 2254d77add595a446719f5abd9a7130d 199 SUPERFAMILY SSF57716 140 191 2.61E-17 T 26-04-2016 smi_0714 488291b4d95a1cd31a40d5e4ecb22dbb 235 Hamap MF_01241 Glucosamine-6-phosphate deaminase [nagB]. 1 233 41.068 T 26-04-2016 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|UniPathway: UPA00629 smi_0714 488291b4d95a1cd31a40d5e4ecb22dbb 235 SUPERFAMILY SSF100950 1 234 1.41E-80 T 26-04-2016 smi_0714 488291b4d95a1cd31a40d5e4ecb22dbb 235 Gene3D G3DSA:3.40.50.1360 1 233 1.3E-81 T 26-04-2016 smi_0714 488291b4d95a1cd31a40d5e4ecb22dbb 235 PANTHER PTHR11280 1 234 6.3E-104 T 26-04-2016 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|UniPathway: UPA00629 smi_0714 488291b4d95a1cd31a40d5e4ecb22dbb 235 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 21 219 1.0E-14 T 26-04-2016 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 smi_0714 488291b4d95a1cd31a40d5e4ecb22dbb 235 ProSitePatterns PS01161 Glucosamine/galactosamine-6-phosphate isomerases signature. 112 130 - T 26-04-2016 IPR018321 Glucosamine-6-phosphate isomerase, conserved site GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|UniPathway: UPA00629 smi_1863 ab1a1c31d6a9a0a438b38fa28c8d19fd 388 Gene3D G3DSA:3.30.420.10 206 355 1.0E-7 T 26-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 smi_1863 ab1a1c31d6a9a0a438b38fa28c8d19fd 388 SUPERFAMILY SSF53098 205 355 1.82E-12 T 26-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 smi_1863 ab1a1c31d6a9a0a438b38fa28c8d19fd 388 Pfam PF13936 Helix-turn-helix domain 3 46 1.6E-14 T 26-04-2016 IPR025246 Transposase IS30-like HTH domain smi_1863 ab1a1c31d6a9a0a438b38fa28c8d19fd 388 PANTHER PTHR10948 1 369 4.2E-19 T 26-04-2016 smi_1857 ab1a1c31d6a9a0a438b38fa28c8d19fd 388 Gene3D G3DSA:3.30.420.10 206 355 1.0E-7 T 26-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 smi_1857 ab1a1c31d6a9a0a438b38fa28c8d19fd 388 SUPERFAMILY SSF53098 205 355 1.82E-12 T 26-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 smi_1857 ab1a1c31d6a9a0a438b38fa28c8d19fd 388 Pfam PF13936 Helix-turn-helix domain 3 46 1.6E-14 T 26-04-2016 IPR025246 Transposase IS30-like HTH domain smi_1857 ab1a1c31d6a9a0a438b38fa28c8d19fd 388 PANTHER PTHR10948 1 369 4.2E-19 T 26-04-2016 smi_1805 075a707eadb923e4f681d1d319cbb7d7 139 SUPERFAMILY SSF110849 2 105 1.18E-7 T 26-04-2016 IPR003115 ParB/Sulfiredoxin smi_1805 075a707eadb923e4f681d1d319cbb7d7 139 Gene3D G3DSA:3.90.1530.10 1 74 9.5E-4 T 26-04-2016 smi_1379 995f9f0d6cc5d1ca9dffe7f597878c34 303 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 226 242 4.6E-36 T 26-04-2016 smi_1379 995f9f0d6cc5d1ca9dffe7f597878c34 303 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 100 118 4.6E-36 T 26-04-2016 smi_1379 995f9f0d6cc5d1ca9dffe7f597878c34 303 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 252 274 4.6E-36 T 26-04-2016 smi_1379 995f9f0d6cc5d1ca9dffe7f597878c34 303 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 4.6E-36 T 26-04-2016 smi_1379 995f9f0d6cc5d1ca9dffe7f597878c34 303 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 142 160 4.6E-36 T 26-04-2016 smi_1379 995f9f0d6cc5d1ca9dffe7f597878c34 303 SUPERFAMILY SSF51905 1 297 9.55E-56 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 smi_1379 995f9f0d6cc5d1ca9dffe7f597878c34 303 PANTHER PTHR22912 1 301 3.8E-139 T 26-04-2016 smi_1379 995f9f0d6cc5d1ca9dffe7f597878c34 303 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 130 150 - T 26-04-2016 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 smi_1379 995f9f0d6cc5d1ca9dffe7f597878c34 303 Gene3D G3DSA:3.50.50.60 1 114 2.2E-48 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 smi_1379 995f9f0d6cc5d1ca9dffe7f597878c34 303 Gene3D G3DSA:3.50.50.60 235 299 2.2E-48 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 smi_1379 995f9f0d6cc5d1ca9dffe7f597878c34 303 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 2 299 1.7E-118 T 26-04-2016 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00240+1.8.1.9|KEGG: 00450+1.8.1.9 smi_1379 995f9f0d6cc5d1ca9dffe7f597878c34 303 Gene3D G3DSA:3.50.50.60 115 234 3.9E-35 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 smi_1379 995f9f0d6cc5d1ca9dffe7f597878c34 303 PANTHER PTHR22912:SF48 1 301 3.8E-139 T 26-04-2016 smi_1379 995f9f0d6cc5d1ca9dffe7f597878c34 303 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 36 51 3.4E-71 T 26-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 smi_1379 995f9f0d6cc5d1ca9dffe7f597878c34 303 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 228 249 3.4E-71 T 26-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 smi_1379 995f9f0d6cc5d1ca9dffe7f597878c34 303 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 56 66 3.4E-71 T 26-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 smi_1379 995f9f0d6cc5d1ca9dffe7f597878c34 303 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 3 25 3.4E-71 T 26-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 smi_1379 995f9f0d6cc5d1ca9dffe7f597878c34 303 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 138 162 3.4E-71 T 26-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 smi_1379 995f9f0d6cc5d1ca9dffe7f597878c34 303 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 262 280 3.4E-71 T 26-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 smi_1379 995f9f0d6cc5d1ca9dffe7f597878c34 303 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 123 135 3.4E-71 T 26-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 smi_1379 995f9f0d6cc5d1ca9dffe7f597878c34 303 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 101 109 3.4E-71 T 26-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 smi_1379 995f9f0d6cc5d1ca9dffe7f597878c34 303 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 190 206 3.4E-71 T 26-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 smi_1379 995f9f0d6cc5d1ca9dffe7f597878c34 303 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 2 288 3.5E-51 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 smi_1626 c49c9abc35e35bb97d6a20ac52f12cbd 798 SUPERFAMILY SSF52540 525 703 6.69E-37 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1626 c49c9abc35e35bb97d6a20ac52f12cbd 798 SUPERFAMILY SSF52540 255 440 9.81E-43 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1626 c49c9abc35e35bb97d6a20ac52f12cbd 798 Gene3D G3DSA:3.40.50.300 523 700 5.8E-36 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1626 c49c9abc35e35bb97d6a20ac52f12cbd 798 Hamap MF_00983 Probable primosomal protein N' [priA]. 9 797 24.386 T 26-04-2016 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 smi_1626 c49c9abc35e35bb97d6a20ac52f12cbd 798 TIGRFAM TIGR00595 priA: primosomal protein N' 285 794 5.8E-201 T 26-04-2016 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 smi_1626 c49c9abc35e35bb97d6a20ac52f12cbd 798 Pfam PF04851 Type III restriction enzyme, res subunit 260 424 2.9E-19 T 26-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 smi_1626 c49c9abc35e35bb97d6a20ac52f12cbd 798 Pfam PF00271 Helicase conserved C-terminal domain 570 656 6.5E-9 T 26-04-2016 IPR001650 Helicase, C-terminal smi_1626 c49c9abc35e35bb97d6a20ac52f12cbd 798 SMART SM00490 560 657 4.1E-10 T 26-04-2016 IPR001650 Helicase, C-terminal smi_1626 c49c9abc35e35bb97d6a20ac52f12cbd 798 SMART SM00487 258 454 4.2E-25 T 26-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain smi_1626 c49c9abc35e35bb97d6a20ac52f12cbd 798 Gene3D G3DSA:3.40.50.300 249 448 8.8E-42 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1626 c49c9abc35e35bb97d6a20ac52f12cbd 798 PANTHER PTHR30580 1 798 1.7E-283 T 26-04-2016 smi_0272 e7bc9ec44d0cc37ef0e2e837d0291904 303 PANTHER PTHR32502 1 303 9.6E-161 T 26-04-2016 smi_0272 e7bc9ec44d0cc37ef0e2e837d0291904 303 PANTHER PTHR32502:SF5 1 303 9.6E-161 T 26-04-2016 smi_0272 e7bc9ec44d0cc37ef0e2e837d0291904 303 Pfam PF03613 PTS system mannose/fructose/sorbose family IID component 6 303 6.4E-115 T 26-04-2016 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 smi_0272 e7bc9ec44d0cc37ef0e2e837d0291904 303 TIGRFAM TIGR00828 EIID-AGA: PTS system, mannose/fructose/sorbose family, IID component 6 212 9.5E-89 T 26-04-2016 IPR018405 Phosphotransferase system, mannose/fructose/sorbose family IID component, subgroup GO:0009401|GO:0016021 smi_1345 5463fdb75c732681aaffce4de7e0fde6 311 PANTHER PTHR22935:SF10 2 311 6.0E-54 T 26-04-2016 smi_1345 5463fdb75c732681aaffce4de7e0fde6 311 Pfam PF00144 Beta-lactamase 9 299 1.3E-51 T 26-04-2016 IPR001466 Beta-lactamase-related smi_1345 5463fdb75c732681aaffce4de7e0fde6 311 Gene3D G3DSA:3.40.710.10 4 297 2.2E-51 T 26-04-2016 IPR012338 Beta-lactamase/transpeptidase-like smi_1345 5463fdb75c732681aaffce4de7e0fde6 311 SUPERFAMILY SSF56601 4 300 1.43E-60 T 26-04-2016 IPR012338 Beta-lactamase/transpeptidase-like smi_1345 5463fdb75c732681aaffce4de7e0fde6 311 PANTHER PTHR22935 2 311 6.0E-54 T 26-04-2016 smi_1478 63525bafe9a401471a5935ea2c56b7cb 319 ProSitePatterns PS01125 ROK family signature. 139 166 - T 26-04-2016 IPR000600 ROK family smi_1478 63525bafe9a401471a5935ea2c56b7cb 319 SUPERFAMILY SSF53067 4 319 4.43E-71 T 26-04-2016 smi_1478 63525bafe9a401471a5935ea2c56b7cb 319 PANTHER PTHR18964:SF123 219 319 3.2E-115 T 26-04-2016 smi_1478 63525bafe9a401471a5935ea2c56b7cb 319 PANTHER PTHR18964:SF123 1 201 3.2E-115 T 26-04-2016 smi_1478 63525bafe9a401471a5935ea2c56b7cb 319 Gene3D G3DSA:3.30.420.40 145 302 6.5E-56 T 26-04-2016 smi_1478 63525bafe9a401471a5935ea2c56b7cb 319 TIGRFAM TIGR00744 ROK_glcA_fam: ROK family protein (putative glucokinase) 6 317 9.9E-104 T 26-04-2016 IPR004654 Glucokinase ROK GO:0004340|GO:0005737|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 smi_1478 63525bafe9a401471a5935ea2c56b7cb 319 Pfam PF00480 ROK family 6 319 6.1E-77 T 26-04-2016 IPR000600 ROK family smi_1478 63525bafe9a401471a5935ea2c56b7cb 319 Gene3D G3DSA:3.30.420.40 3 144 1.3E-47 T 26-04-2016 smi_1478 63525bafe9a401471a5935ea2c56b7cb 319 PANTHER PTHR18964 219 319 3.2E-115 T 26-04-2016 smi_1478 63525bafe9a401471a5935ea2c56b7cb 319 PANTHER PTHR18964 1 201 3.2E-115 T 26-04-2016 smi_0274 16c4984909fbd834432e7b6919bb6de5 329 SUPERFAMILY SSF52728 168 327 7.59E-53 T 26-04-2016 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 smi_0274 16c4984909fbd834432e7b6919bb6de5 329 Gene3D G3DSA:3.40.35.10 168 327 7.7E-63 T 26-04-2016 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 smi_0274 16c4984909fbd834432e7b6919bb6de5 329 Pfam PF03830 PTS system sorbose subfamily IIB component 169 316 3.1E-50 T 26-04-2016 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 smi_0274 16c4984909fbd834432e7b6919bb6de5 329 Gene3D G3DSA:3.40.50.510 1 142 7.5E-50 T 26-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 smi_0274 16c4984909fbd834432e7b6919bb6de5 329 Pfam PF03610 PTS system fructose IIA component 4 119 1.4E-35 T 26-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 smi_0274 16c4984909fbd834432e7b6919bb6de5 329 PANTHER PTHR33799 3 329 3.2E-227 T 26-04-2016 smi_0274 16c4984909fbd834432e7b6919bb6de5 329 PANTHER PTHR33799:SF7 3 329 3.2E-227 T 26-04-2016 smi_0274 16c4984909fbd834432e7b6919bb6de5 329 SUPERFAMILY SSF53062 1 137 4.45E-36 T 26-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 smi_1453 7066eeb06b39a082a9163b4e7a7d93fe 613 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 8 604 3.5E-294 T 26-04-2016 IPR006298 GTP-binding protein TypA GO:0005525 smi_1453 7066eeb06b39a082a9163b4e7a7d93fe 613 PANTHER PTHR23115 1 596 1.1E-294 T 26-04-2016 smi_1453 7066eeb06b39a082a9163b4e7a7d93fe 613 Pfam PF00679 Elongation factor G C-terminus 401 479 1.1E-24 T 26-04-2016 IPR000640 Translation elongation factor EFG, V domain smi_1453 7066eeb06b39a082a9163b4e7a7d93fe 613 Gene3D G3DSA:3.30.70.870 309 404 9.8E-39 T 26-04-2016 smi_1453 7066eeb06b39a082a9163b4e7a7d93fe 613 PRINTS PR00315 GTP-binding elongation factor signature 126 135 1.4E-14 T 26-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 smi_1453 7066eeb06b39a082a9163b4e7a7d93fe 613 PRINTS PR00315 GTP-binding elongation factor signature 74 84 1.4E-14 T 26-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 smi_1453 7066eeb06b39a082a9163b4e7a7d93fe 613 PRINTS PR00315 GTP-binding elongation factor signature 10 23 1.4E-14 T 26-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 smi_1453 7066eeb06b39a082a9163b4e7a7d93fe 613 PRINTS PR00315 GTP-binding elongation factor signature 90 101 1.4E-14 T 26-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 smi_1453 7066eeb06b39a082a9163b4e7a7d93fe 613 PRINTS PR00315 GTP-binding elongation factor signature 54 62 1.4E-14 T 26-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 smi_1453 7066eeb06b39a082a9163b4e7a7d93fe 613 SMART SM00838 400 485 6.0E-6 T 26-04-2016 IPR000640 Translation elongation factor EFG, V domain smi_1453 7066eeb06b39a082a9163b4e7a7d93fe 613 Gene3D G3DSA:3.30.70.240 405 480 9.7E-34 T 26-04-2016 IPR000640 Translation elongation factor EFG, V domain smi_1453 7066eeb06b39a082a9163b4e7a7d93fe 613 PANTHER PTHR23115:SF14 1 596 1.1E-294 T 26-04-2016 IPR006298 GTP-binding protein TypA GO:0005525 smi_1453 7066eeb06b39a082a9163b4e7a7d93fe 613 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 8 146 1.1E-23 T 26-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 smi_1453 7066eeb06b39a082a9163b4e7a7d93fe 613 Pfam PF00009 Elongation factor Tu GTP binding domain 7 200 2.3E-54 T 26-04-2016 smi_1453 7066eeb06b39a082a9163b4e7a7d93fe 613 Gene3D G3DSA:3.40.50.300 4 209 5.3E-62 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1453 7066eeb06b39a082a9163b4e7a7d93fe 613 SUPERFAMILY SSF50447 155 304 2.29E-32 T 26-04-2016 IPR009000 Translation protein, beta-barrel domain smi_1453 7066eeb06b39a082a9163b4e7a7d93fe 613 SUPERFAMILY SSF54980 307 392 1.87E-15 T 26-04-2016 IPR009022 Elongation factor G, III-V domain smi_1453 7066eeb06b39a082a9163b4e7a7d93fe 613 SUPERFAMILY SSF52540 3 212 9.21E-55 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1453 7066eeb06b39a082a9163b4e7a7d93fe 613 Gene3D G3DSA:2.40.30.10 210 308 5.3E-27 T 26-04-2016 smi_1453 7066eeb06b39a082a9163b4e7a7d93fe 613 Pfam PF03144 Elongation factor Tu domain 2 224 294 2.1E-13 T 26-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 smi_1453 7066eeb06b39a082a9163b4e7a7d93fe 613 Gene3D G3DSA:2.40.50.250 488 582 2.7E-39 T 26-04-2016 smi_1453 7066eeb06b39a082a9163b4e7a7d93fe 613 SUPERFAMILY SSF54980 403 518 3.79E-30 T 26-04-2016 IPR009022 Elongation factor G, III-V domain smi_1453 7066eeb06b39a082a9163b4e7a7d93fe 613 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 47 62 - T 26-04-2016 IPR031157 Tr-type G domain, conserved site smi_1880 0300c95af3e1579bd1f7857bac07a841 127 Gene3D G3DSA:3.30.420.80 5 127 2.9E-55 T 26-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 smi_1880 0300c95af3e1579bd1f7857bac07a841 127 PIRSF PIRSF002131 2 127 1.5E-51 T 26-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 smi_1880 0300c95af3e1579bd1f7857bac07a841 127 SUPERFAMILY SSF53137 12 127 1.63E-48 T 26-04-2016 smi_1880 0300c95af3e1579bd1f7857bac07a841 127 PANTHER PTHR11759 8 127 1.2E-69 T 26-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 smi_1880 0300c95af3e1579bd1f7857bac07a841 127 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 8 124 9.3E-58 T 26-04-2016 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_1880 0300c95af3e1579bd1f7857bac07a841 127 Pfam PF00411 Ribosomal protein S11 17 126 5.8E-51 T 26-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 smi_1880 0300c95af3e1579bd1f7857bac07a841 127 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 3 127 33.361 T 26-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 smi_1880 0300c95af3e1579bd1f7857bac07a841 127 ProSitePatterns PS00054 Ribosomal protein S11 signature. 95 117 - T 26-04-2016 IPR018102 Ribosomal S11, conserved site smi_1769 5034511d6316ece5408b7938ee946f4a 316 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 7 314 37.566 T 26-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 smi_1769 5034511d6316ece5408b7938ee946f4a 316 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 2 313 4.5E-119 T 26-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 smi_1769 5034511d6316ece5408b7938ee946f4a 316 SUPERFAMILY SSF81799 118 219 5.75E-36 T 26-04-2016 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 smi_1769 5034511d6316ece5408b7938ee946f4a 316 Pfam PF01795 MraW methylase family 4 314 2.0E-135 T 26-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 smi_1769 5034511d6316ece5408b7938ee946f4a 316 SUPERFAMILY SSF53335 6 117 4.91E-44 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase smi_1769 5034511d6316ece5408b7938ee946f4a 316 SUPERFAMILY SSF53335 219 314 4.91E-44 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase smi_1769 5034511d6316ece5408b7938ee946f4a 316 PANTHER PTHR11265:SF0 4 316 9.4E-149 T 26-04-2016 smi_1769 5034511d6316ece5408b7938ee946f4a 316 Gene3D G3DSA:3.40.50.150 222 314 9.5E-48 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase smi_1769 5034511d6316ece5408b7938ee946f4a 316 Gene3D G3DSA:3.40.50.150 7 114 9.5E-48 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase smi_1769 5034511d6316ece5408b7938ee946f4a 316 Gene3D G3DSA:1.10.150.170 117 221 1.0E-39 T 26-04-2016 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 smi_1769 5034511d6316ece5408b7938ee946f4a 316 PANTHER PTHR11265 4 316 9.4E-149 T 26-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 smi_1769 5034511d6316ece5408b7938ee946f4a 316 PIRSF PIRSF004486 1 315 3.3E-108 T 26-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 smi_0520 72a8a6e5efcfebce8c954049e0c77e03 392 Hamap MF_00246 Galactokinase [galK]. 28 390 48.816 T 26-04-2016 IPR022963 Galactokinase, bacterial GO:0004335|GO:0006012 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 smi_0520 72a8a6e5efcfebce8c954049e0c77e03 392 PRINTS PR00959 Mevalonate kinase family signature 166 185 2.6E-43 T 26-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 smi_0520 72a8a6e5efcfebce8c954049e0c77e03 392 PRINTS PR00959 Mevalonate kinase family signature 123 145 2.6E-43 T 26-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 smi_0520 72a8a6e5efcfebce8c954049e0c77e03 392 PRINTS PR00959 Mevalonate kinase family signature 28 52 2.6E-43 T 26-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 smi_0520 72a8a6e5efcfebce8c954049e0c77e03 392 PRINTS PR00959 Mevalonate kinase family signature 337 354 2.6E-43 T 26-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 smi_0520 72a8a6e5efcfebce8c954049e0c77e03 392 PANTHER PTHR10457:SF6 8 392 1.3E-122 T 26-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 smi_0520 72a8a6e5efcfebce8c954049e0c77e03 392 Pfam PF00288 GHMP kinases N terminal domain 118 185 1.9E-12 T 26-04-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 smi_0520 72a8a6e5efcfebce8c954049e0c77e03 392 ProSitePatterns PS00106 Galactokinase signature. 30 41 - T 26-04-2016 IPR019741 Galactokinase, conserved site KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 smi_0520 72a8a6e5efcfebce8c954049e0c77e03 392 SUPERFAMILY SSF55060 210 390 7.52E-55 T 26-04-2016 IPR013750 GHMP kinase, C-terminal domain smi_0520 72a8a6e5efcfebce8c954049e0c77e03 392 PANTHER PTHR10457 8 392 1.3E-122 T 26-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 smi_0520 72a8a6e5efcfebce8c954049e0c77e03 392 TIGRFAM TIGR00131 gal_kin: galactokinase 8 389 1.1E-118 T 26-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 smi_0520 72a8a6e5efcfebce8c954049e0c77e03 392 Pfam PF10509 Galactokinase galactose-binding signature 13 61 2.2E-21 T 26-04-2016 IPR019539 Galactokinase galactose-binding domain KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 smi_0520 72a8a6e5efcfebce8c954049e0c77e03 392 SUPERFAMILY SSF54211 6 207 4.86E-60 T 26-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold smi_0520 72a8a6e5efcfebce8c954049e0c77e03 392 Gene3D G3DSA:3.30.230.10 8 213 1.7E-71 T 26-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup smi_0520 72a8a6e5efcfebce8c954049e0c77e03 392 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 125 136 - T 26-04-2016 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 smi_0520 72a8a6e5efcfebce8c954049e0c77e03 392 PRINTS PR00473 Galactokinase signature 95 106 4.7E-28 T 26-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 smi_0520 72a8a6e5efcfebce8c954049e0c77e03 392 PRINTS PR00473 Galactokinase signature 116 134 4.7E-28 T 26-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 smi_0520 72a8a6e5efcfebce8c954049e0c77e03 392 PRINTS PR00473 Galactokinase signature 273 287 4.7E-28 T 26-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 smi_0520 72a8a6e5efcfebce8c954049e0c77e03 392 PRINTS PR00473 Galactokinase signature 30 48 4.7E-28 T 26-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 smi_0520 72a8a6e5efcfebce8c954049e0c77e03 392 PIRSF PIRSF000530 1 392 1.2E-120 T 26-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 smi_0520 72a8a6e5efcfebce8c954049e0c77e03 392 Gene3D G3DSA:3.30.70.890 214 380 2.3E-58 T 26-04-2016 IPR013750 GHMP kinase, C-terminal domain smi_0520 72a8a6e5efcfebce8c954049e0c77e03 392 Pfam PF08544 GHMP kinases C terminal 290 370 1.4E-15 T 26-04-2016 IPR013750 GHMP kinase, C-terminal domain smi_1056 0871ebfea545e61be5a71ebc02276f3a 154 PRINTS PR01402 Mutator MutX protein signature 134 154 1.6E-69 T 26-04-2016 IPR003562 Mutator MutX protein GO:0006281|GO:0008413 MetaCyc: PWY-6502 smi_1056 0871ebfea545e61be5a71ebc02276f3a 154 PRINTS PR01402 Mutator MutX protein signature 4 22 1.6E-69 T 26-04-2016 IPR003562 Mutator MutX protein GO:0006281|GO:0008413 MetaCyc: PWY-6502 smi_1056 0871ebfea545e61be5a71ebc02276f3a 154 PRINTS PR01402 Mutator MutX protein signature 117 134 1.6E-69 T 26-04-2016 IPR003562 Mutator MutX protein GO:0006281|GO:0008413 MetaCyc: PWY-6502 smi_1056 0871ebfea545e61be5a71ebc02276f3a 154 PRINTS PR01402 Mutator MutX protein signature 97 117 1.6E-69 T 26-04-2016 IPR003562 Mutator MutX protein GO:0006281|GO:0008413 MetaCyc: PWY-6502 smi_1056 0871ebfea545e61be5a71ebc02276f3a 154 PRINTS PR01402 Mutator MutX protein signature 67 93 1.6E-69 T 26-04-2016 IPR003562 Mutator MutX protein GO:0006281|GO:0008413 MetaCyc: PWY-6502 smi_1056 0871ebfea545e61be5a71ebc02276f3a 154 PRINTS PR01402 Mutator MutX protein signature 22 37 1.6E-69 T 26-04-2016 IPR003562 Mutator MutX protein GO:0006281|GO:0008413 MetaCyc: PWY-6502 smi_1056 0871ebfea545e61be5a71ebc02276f3a 154 Gene3D G3DSA:3.90.79.10 3 153 1.8E-37 T 26-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 smi_1056 0871ebfea545e61be5a71ebc02276f3a 154 PRINTS PR00502 NUDIX hydrolase family signature 33 47 8.6E-6 T 26-04-2016 IPR020476 NUDIX hydrolase smi_1056 0871ebfea545e61be5a71ebc02276f3a 154 PRINTS PR00502 NUDIX hydrolase family signature 47 62 8.6E-6 T 26-04-2016 IPR020476 NUDIX hydrolase smi_1056 0871ebfea545e61be5a71ebc02276f3a 154 PANTHER PTHR22769 1 143 6.2E-60 T 26-04-2016 smi_1056 0871ebfea545e61be5a71ebc02276f3a 154 PANTHER PTHR22769:SF39 1 143 6.2E-60 T 26-04-2016 smi_1056 0871ebfea545e61be5a71ebc02276f3a 154 Pfam PF00293 NUDIX domain 2 126 5.1E-21 T 26-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 smi_1056 0871ebfea545e61be5a71ebc02276f3a 154 SUPERFAMILY SSF55811 3 145 1.9E-26 T 26-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 smi_1056 0871ebfea545e61be5a71ebc02276f3a 154 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 26-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 smi_1839 fcf366eb826b283eb9edae7578ec76b5 384 ProSitePatterns PS00321 recA signature. 227 235 - T 26-04-2016 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 smi_1839 fcf366eb826b283eb9edae7578ec76b5 384 Pfam PF00154 recA bacterial DNA recombination protein 21 286 4.0E-139 T 26-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 smi_1839 fcf366eb826b283eb9edae7578ec76b5 384 Gene3D G3DSA:3.30.250.10 286 343 3.7E-26 T 26-04-2016 IPR023400 DNA recombination and repair protein RecA, C-terminal smi_1839 fcf366eb826b283eb9edae7578ec76b5 384 SUPERFAMILY SSF54752 286 343 5.36E-20 T 26-04-2016 IPR023400 DNA recombination and repair protein RecA, C-terminal smi_1839 fcf366eb826b283eb9edae7578ec76b5 384 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 18 341 2.4E-161 T 26-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 smi_1839 fcf366eb826b283eb9edae7578ec76b5 384 Gene3D G3DSA:3.40.50.300 40 285 4.3E-74 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1839 fcf366eb826b283eb9edae7578ec76b5 384 PANTHER PTHR22942:SF1 9 353 1.4E-193 T 26-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 smi_1839 fcf366eb826b283eb9edae7578ec76b5 384 Hamap MF_00268 Protein RecA [recA]. 19 347 50.773 T 26-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 smi_1839 fcf366eb826b283eb9edae7578ec76b5 384 PANTHER PTHR22942 9 353 1.4E-193 T 26-04-2016 smi_1839 fcf366eb826b283eb9edae7578ec76b5 384 SMART SM00382 71 242 2.3E-8 T 26-04-2016 IPR003593 AAA+ ATPase domain smi_1839 fcf366eb826b283eb9edae7578ec76b5 384 SUPERFAMILY SSF52540 19 285 1.6E-58 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1839 fcf366eb826b283eb9edae7578ec76b5 384 PRINTS PR00142 RecA protein signature 107 136 8.9E-82 T 26-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 smi_1839 fcf366eb826b283eb9edae7578ec76b5 384 PRINTS PR00142 RecA protein signature 315 332 8.9E-82 T 26-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 smi_1839 fcf366eb826b283eb9edae7578ec76b5 384 PRINTS PR00142 RecA protein signature 179 208 8.9E-82 T 26-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 smi_1839 fcf366eb826b283eb9edae7578ec76b5 384 PRINTS PR00142 RecA protein signature 224 252 8.9E-82 T 26-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 smi_1839 fcf366eb826b283eb9edae7578ec76b5 384 PRINTS PR00142 RecA protein signature 261 290 8.9E-82 T 26-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 smi_1839 fcf366eb826b283eb9edae7578ec76b5 384 PRINTS PR00142 RecA protein signature 141 170 8.9E-82 T 26-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 smi_2020 4c2876e8204862a6d5125d4e4da38368 424 Pfam PF07532 Bacterial Ig-like domain (group 4) 172 229 6.5E-8 T 26-04-2016 IPR011081 Bacterial Ig-related KEGG: 00511+3.2.1.18|KEGG: 00600+3.2.1.18 smi_2020 4c2876e8204862a6d5125d4e4da38368 424 Pfam PF07532 Bacterial Ig-like domain (group 4) 105 155 1.1E-9 T 26-04-2016 IPR011081 Bacterial Ig-related KEGG: 00511+3.2.1.18|KEGG: 00600+3.2.1.18 smi_1302 1c38cfc0d4d3b5b164fd37e76205540b 660 PANTHER PTHR30290:SF10 407 634 5.5E-115 T 26-04-2016 smi_1302 1c38cfc0d4d3b5b164fd37e76205540b 660 PANTHER PTHR30290:SF10 1 314 5.5E-115 T 26-04-2016 smi_1302 1c38cfc0d4d3b5b164fd37e76205540b 660 PANTHER PTHR30290:SF10 333 391 5.5E-115 T 26-04-2016 smi_1302 1c38cfc0d4d3b5b164fd37e76205540b 660 SUPERFAMILY SSF53850 29 602 2.35E-74 T 26-04-2016 smi_1302 1c38cfc0d4d3b5b164fd37e76205540b 660 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 83 105 - T 26-04-2016 IPR023765 Solute-binding protein family 5, conserved site smi_1302 1c38cfc0d4d3b5b164fd37e76205540b 660 Gene3D G3DSA:3.40.190.10 213 343 1.5E-12 T 26-04-2016 smi_1302 1c38cfc0d4d3b5b164fd37e76205540b 660 Gene3D G3DSA:3.10.105.10 344 587 3.3E-32 T 26-04-2016 smi_1302 1c38cfc0d4d3b5b164fd37e76205540b 660 PANTHER PTHR30290 407 634 5.5E-115 T 26-04-2016 smi_1302 1c38cfc0d4d3b5b164fd37e76205540b 660 PANTHER PTHR30290 1 314 5.5E-115 T 26-04-2016 smi_1302 1c38cfc0d4d3b5b164fd37e76205540b 660 PANTHER PTHR30290 333 391 5.5E-115 T 26-04-2016 smi_1302 1c38cfc0d4d3b5b164fd37e76205540b 660 PIRSF PIRSF002741 1 621 3.1E-38 T 26-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 smi_1302 1c38cfc0d4d3b5b164fd37e76205540b 660 Gene3D G3DSA:3.90.76.10 44 212 5.3E-37 T 26-04-2016 smi_1302 1c38cfc0d4d3b5b164fd37e76205540b 660 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 78 523 1.8E-44 T 26-04-2016 IPR000914 Solute-binding protein family 5 domain smi_0425 5559578e41d84c2949a2164cc18c1c0f 534 SMART SM00885 91 224 8.6E-7 T 26-04-2016 IPR014818 Bacteriophage/plasmid primase, P4, C-terminal smi_0425 5559578e41d84c2949a2164cc18c1c0f 534 TIGRFAM TIGR01613 primase_Cterm: phage/plasmid primase, P4 family, C-terminal domain 175 477 1.5E-99 T 26-04-2016 IPR006500 DNA primase, phage/plasmid smi_0425 5559578e41d84c2949a2164cc18c1c0f 534 Gene3D G3DSA:3.40.50.300 213 411 1.9E-33 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0425 5559578e41d84c2949a2164cc18c1c0f 534 SUPERFAMILY SSF52540 216 408 6.37E-26 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0425 5559578e41d84c2949a2164cc18c1c0f 534 PANTHER PTHR35372 173 534 3.4E-12 T 26-04-2016 smi_0425 5559578e41d84c2949a2164cc18c1c0f 534 Pfam PF03288 Poxvirus D5 protein-like 431 518 1.5E-21 T 26-04-2016 IPR004968 DNA primase/nucleoside triphosphatase, C-terminal smi_0425 5559578e41d84c2949a2164cc18c1c0f 534 PANTHER PTHR35372:SF2 173 534 3.4E-12 T 26-04-2016 smi_0425 5559578e41d84c2949a2164cc18c1c0f 534 Pfam PF01057 Parvovirus non-structural protein NS1 242 361 6.4E-5 T 26-04-2016 IPR001257 Parvovirus non-structural protein 1, helicase domain GO:0019079 smi_0391 aaa77808178cbfac08e121cd7783e049 688 Gene3D G3DSA:3.30.565.10 15 174 2.2E-20 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain smi_0391 aaa77808178cbfac08e121cd7783e049 688 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 24 142 4.7E-22 T 26-04-2016 smi_0391 aaa77808178cbfac08e121cd7783e049 688 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 598 686 1.7E-6 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain smi_0391 aaa77808178cbfac08e121cd7783e049 688 SUPERFAMILY SSF55874 14 169 3.01E-21 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain smi_0391 aaa77808178cbfac08e121cd7783e049 688 SMART SM00387 590 688 3.9E-4 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain smi_0391 aaa77808178cbfac08e121cd7783e049 688 Gene3D G3DSA:3.30.565.10 594 683 3.3E-9 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain smi_0391 aaa77808178cbfac08e121cd7783e049 688 SUPERFAMILY SSF55874 588 685 9.72E-12 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain smi_0922 58ae6391b26233e087107cde69ac061f 398 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 149 2.0E-13 T 26-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 smi_0922 58ae6391b26233e087107cde69ac061f 398 Pfam PF03143 Elongation factor Tu C-terminal domain 302 396 4.4E-32 T 26-04-2016 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal smi_0922 58ae6391b26233e087107cde69ac061f 398 SUPERFAMILY SSF50447 206 305 1.27E-29 T 26-04-2016 IPR009000 Translation protein, beta-barrel domain smi_0922 58ae6391b26233e087107cde69ac061f 398 PRINTS PR00315 GTP-binding elongation factor signature 14 27 2.0E-25 T 26-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 smi_0922 58ae6391b26233e087107cde69ac061f 398 PRINTS PR00315 GTP-binding elongation factor signature 61 69 2.0E-25 T 26-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 smi_0922 58ae6391b26233e087107cde69ac061f 398 PRINTS PR00315 GTP-binding elongation factor signature 81 91 2.0E-25 T 26-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 smi_0922 58ae6391b26233e087107cde69ac061f 398 PRINTS PR00315 GTP-binding elongation factor signature 97 108 2.0E-25 T 26-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 smi_0922 58ae6391b26233e087107cde69ac061f 398 PRINTS PR00315 GTP-binding elongation factor signature 134 143 2.0E-25 T 26-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 smi_0922 58ae6391b26233e087107cde69ac061f 398 Pfam PF03144 Elongation factor Tu domain 2 228 297 6.4E-16 T 26-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 smi_0922 58ae6391b26233e087107cde69ac061f 398 Gene3D G3DSA:2.40.30.10 305 396 1.8E-45 T 26-04-2016 smi_0922 58ae6391b26233e087107cde69ac061f 398 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 54 69 - T 26-04-2016 IPR031157 Tr-type G domain, conserved site smi_0922 58ae6391b26233e087107cde69ac061f 398 PANTHER PTHR23115 1 397 3.6E-245 T 26-04-2016 smi_0922 58ae6391b26233e087107cde69ac061f 398 Gene3D G3DSA:2.40.30.10 212 302 3.5E-37 T 26-04-2016 smi_0922 58ae6391b26233e087107cde69ac061f 398 PANTHER PTHR23115:SF112 1 397 3.6E-245 T 26-04-2016 smi_0922 58ae6391b26233e087107cde69ac061f 398 SUPERFAMILY SSF52540 6 222 4.87E-61 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0922 58ae6391b26233e087107cde69ac061f 398 Pfam PF00009 Elongation factor Tu GTP binding domain 10 204 6.1E-59 T 26-04-2016 smi_0922 58ae6391b26233e087107cde69ac061f 398 Gene3D G3DSA:3.40.50.300 3 211 4.4E-72 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0922 58ae6391b26233e087107cde69ac061f 398 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 396 4.7E-222 T 26-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 smi_0922 58ae6391b26233e087107cde69ac061f 398 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 398 59.488 T 26-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 smi_0922 58ae6391b26233e087107cde69ac061f 398 SUPERFAMILY SSF50465 306 397 1.24E-35 T 26-04-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal smi_1879 bf8fb91382e9c0fb753166f471510237 311 SUPERFAMILY SSF47789 246 309 1.7E-22 T 26-04-2016 smi_1879 bf8fb91382e9c0fb753166f471510237 311 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 24 219 4.3E-20 T 26-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 smi_1879 bf8fb91382e9c0fb753166f471510237 311 Gene3D G3DSA:3.30.1360.10 2 55 1.4E-11 T 26-04-2016 smi_1879 bf8fb91382e9c0fb753166f471510237 311 Gene3D G3DSA:2.170.120.12 56 168 1.8E-45 T 26-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 smi_1879 bf8fb91382e9c0fb753166f471510237 311 Gene3D G3DSA:1.10.150.20 244 310 1.3E-30 T 26-04-2016 smi_1879 bf8fb91382e9c0fb753166f471510237 311 SMART SM00662 18 225 7.8E-92 T 26-04-2016 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 smi_1879 bf8fb91382e9c0fb753166f471510237 311 SUPERFAMILY SSF56553 48 169 3.53E-42 T 26-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 smi_1879 bf8fb91382e9c0fb753166f471510237 311 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 18 310 6.6E-115 T 26-04-2016 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 smi_1879 bf8fb91382e9c0fb753166f471510237 311 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 1 311 36.102 T 26-04-2016 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 smi_1879 bf8fb91382e9c0fb753166f471510237 311 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 251 297 6.0E-20 T 26-04-2016 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 smi_1879 bf8fb91382e9c0fb753166f471510237 311 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 241 301 9.4E-27 T 26-04-2016 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 smi_1879 bf8fb91382e9c0fb753166f471510237 311 PANTHER PTHR32108:SF0 1 310 1.7E-134 T 26-04-2016 smi_1879 bf8fb91382e9c0fb753166f471510237 311 PANTHER PTHR32108 1 310 1.7E-134 T 26-04-2016 smi_1879 bf8fb91382e9c0fb753166f471510237 311 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 58 150 3.8E-25 T 26-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 smi_1879 bf8fb91382e9c0fb753166f471510237 311 SUPERFAMILY SSF55257 4 48 1.81E-29 T 26-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 smi_1879 bf8fb91382e9c0fb753166f471510237 311 SUPERFAMILY SSF55257 170 224 1.81E-29 T 26-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 smi_0797 3a3a7f621939833c4dfed78764b0f7ef 369 SUPERFAMILY SSF51735 2 146 6.63E-47 T 26-04-2016 IPR016040 NAD(P)-binding domain smi_0797 3a3a7f621939833c4dfed78764b0f7ef 369 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 2 118 4.8E-31 T 26-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 smi_0797 3a3a7f621939833c4dfed78764b0f7ef 369 PANTHER PTHR22604 1 276 1.6E-202 T 26-04-2016 smi_0797 3a3a7f621939833c4dfed78764b0f7ef 369 PANTHER PTHR22604 297 366 1.6E-202 T 26-04-2016 smi_0797 3a3a7f621939833c4dfed78764b0f7ef 369 Gene3D G3DSA:3.40.50.720 1 129 3.5E-42 T 26-04-2016 IPR016040 NAD(P)-binding domain smi_0797 3a3a7f621939833c4dfed78764b0f7ef 369 PANTHER PTHR22604:SF135 1 276 1.6E-202 T 26-04-2016 smi_0797 3a3a7f621939833c4dfed78764b0f7ef 369 PANTHER PTHR22604:SF135 297 366 1.6E-202 T 26-04-2016 smi_0797 3a3a7f621939833c4dfed78764b0f7ef 369 Gene3D G3DSA:3.30.360.10 130 358 1.6E-28 T 26-04-2016 smi_0797 3a3a7f621939833c4dfed78764b0f7ef 369 SUPERFAMILY SSF55347 126 275 1.23E-22 T 26-04-2016 smi_0797 3a3a7f621939833c4dfed78764b0f7ef 369 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 130 240 2.2E-18 T 26-04-2016 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 smi_1819 cf1c2825f348c6eb267fae56819f9111 521 SMART SM00062 27 264 3.4E-37 T 26-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF smi_1819 cf1c2825f348c6eb267fae56819f9111 521 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 334 504 1.3E-20 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 smi_1819 cf1c2825f348c6eb267fae56819f9111 521 PANTHER PTHR30614:SF15 19 509 2.5E-160 T 26-04-2016 smi_1819 cf1c2825f348c6eb267fae56819f9111 521 PANTHER PTHR30614 19 509 2.5E-160 T 26-04-2016 smi_1819 cf1c2825f348c6eb267fae56819f9111 521 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 28 255 1.2E-35 T 26-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF smi_1819 cf1c2825f348c6eb267fae56819f9111 521 SUPERFAMILY SSF161098 290 489 7.59E-46 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 smi_1819 cf1c2825f348c6eb267fae56819f9111 521 SUPERFAMILY SSF53850 2 253 1.34E-45 T 26-04-2016 smi_1819 cf1c2825f348c6eb267fae56819f9111 521 Gene3D G3DSA:3.40.190.10 225 254 1.4E-31 T 26-04-2016 smi_1819 cf1c2825f348c6eb267fae56819f9111 521 Gene3D G3DSA:3.40.190.10 25 116 1.4E-31 T 26-04-2016 smi_1819 cf1c2825f348c6eb267fae56819f9111 521 Gene3D G3DSA:1.10.3720.10 288 504 2.5E-57 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 smi_1819 cf1c2825f348c6eb267fae56819f9111 521 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 290 398 9.8E-22 T 26-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 smi_1819 cf1c2825f348c6eb267fae56819f9111 521 Gene3D G3DSA:3.40.190.10 117 212 1.0E-12 T 26-04-2016 smi_1614 0b0c54f7a8292c267b299c5b5af5626f 295 Pfam PF00480 ROK family 5 292 4.3E-77 T 26-04-2016 IPR000600 ROK family smi_1614 0b0c54f7a8292c267b299c5b5af5626f 295 PANTHER PTHR18964:SF10 1 293 1.6E-88 T 26-04-2016 smi_1614 0b0c54f7a8292c267b299c5b5af5626f 295 PANTHER PTHR18964 1 293 1.6E-88 T 26-04-2016 smi_1614 0b0c54f7a8292c267b299c5b5af5626f 295 ProSitePatterns PS01125 ROK family signature. 134 159 - T 26-04-2016 IPR000600 ROK family smi_1614 0b0c54f7a8292c267b299c5b5af5626f 295 Gene3D G3DSA:3.30.420.40 1 106 1.1E-37 T 26-04-2016 smi_1614 0b0c54f7a8292c267b299c5b5af5626f 295 Gene3D G3DSA:3.30.420.40 107 293 5.5E-65 T 26-04-2016 smi_1614 0b0c54f7a8292c267b299c5b5af5626f 295 SUPERFAMILY SSF53067 5 292 5.19E-41 T 26-04-2016 smi_1942 0efd99a4cdee3f34c4a32ce9f5557503 353 Gene3D G3DSA:3.40.50.300 5 250 1.0E-80 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1942 0efd99a4cdee3f34c4a32ce9f5557503 353 PANTHER PTHR24220 7 270 6.3E-150 T 26-04-2016 smi_1942 0efd99a4cdee3f34c4a32ce9f5557503 353 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 26-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 smi_1942 0efd99a4cdee3f34c4a32ce9f5557503 353 PANTHER PTHR24220:SF549 7 270 6.3E-150 T 26-04-2016 IPR026253 Methionine import ATP-binding protein MetN GO:0005524|GO:0015821|GO:0042626 smi_1942 0efd99a4cdee3f34c4a32ce9f5557503 353 Pfam PF09383 NIL domain 277 348 2.1E-17 T 26-04-2016 IPR018449 NIL domain smi_1942 0efd99a4cdee3f34c4a32ce9f5557503 353 SMART SM00930 274 349 4.6E-26 T 26-04-2016 IPR018449 NIL domain smi_1942 0efd99a4cdee3f34c4a32ce9f5557503 353 Pfam PF00005 ABC transporter 26 177 4.8E-35 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 smi_1942 0efd99a4cdee3f34c4a32ce9f5557503 353 Gene3D G3DSA:3.30.70.260 263 350 2.1E-26 T 26-04-2016 smi_1942 0efd99a4cdee3f34c4a32ce9f5557503 353 SMART SM00382 34 226 2.4E-12 T 26-04-2016 IPR003593 AAA+ ATPase domain smi_1942 0efd99a4cdee3f34c4a32ce9f5557503 353 SUPERFAMILY SSF52540 5 248 7.27E-78 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1942 0efd99a4cdee3f34c4a32ce9f5557503 353 SUPERFAMILY SSF55021 265 351 8.13E-20 T 26-04-2016 smi_0656 afadd2a3dfe24b85e736527c46a6f565 89 SMART SM01387 8 88 4.6E-46 T 26-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_0656 afadd2a3dfe24b85e736527c46a6f565 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 5 89 4.2E-37 T 26-04-2016 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 smi_0656 afadd2a3dfe24b85e736527c46a6f565 89 SUPERFAMILY SSF47060 3 89 1.62E-34 T 26-04-2016 IPR009068 S15/NS1, RNA-binding Reactome: REACT_71 smi_0656 afadd2a3dfe24b85e736527c46a6f565 89 PANTHER PTHR23321 1 89 4.4E-43 T 26-04-2016 smi_0656 afadd2a3dfe24b85e736527c46a6f565 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 10 88 4.0E-40 T 26-04-2016 smi_0656 afadd2a3dfe24b85e736527c46a6f565 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 22.075 T 26-04-2016 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 smi_0656 afadd2a3dfe24b85e736527c46a6f565 89 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 26-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_0656 afadd2a3dfe24b85e736527c46a6f565 89 Pfam PF00312 Ribosomal protein S15 8 88 3.6E-34 T 26-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_0656 afadd2a3dfe24b85e736527c46a6f565 89 Gene3D G3DSA:1.10.287.10 3 89 1.0E-38 T 26-04-2016 IPR009068 S15/NS1, RNA-binding Reactome: REACT_71 smi_0202 6984d94c54ead29f710ffca08d5d8e7b 383 Gene3D G3DSA:2.30.40.10 30 54 2.1E-7 T 26-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 smi_0202 6984d94c54ead29f710ffca08d5d8e7b 383 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 34 377 6.8E-87 T 26-04-2016 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395 smi_0202 6984d94c54ead29f710ffca08d5d8e7b 383 Gene3D G3DSA:3.20.20.140 55 335 2.4E-96 T 26-04-2016 smi_0202 6984d94c54ead29f710ffca08d5d8e7b 383 PANTHER PTHR11113 9 377 5.8E-151 T 26-04-2016 smi_0202 6984d94c54ead29f710ffca08d5d8e7b 383 SUPERFAMILY SSF51338 351 382 1.04E-11 T 26-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 smi_0202 6984d94c54ead29f710ffca08d5d8e7b 383 SUPERFAMILY SSF51338 5 52 1.04E-11 T 26-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 smi_0202 6984d94c54ead29f710ffca08d5d8e7b 383 PANTHER PTHR11113:SF7 9 377 5.8E-151 T 26-04-2016 smi_0202 6984d94c54ead29f710ffca08d5d8e7b 383 PIRSF PIRSF038994 21 383 2.6E-114 T 26-04-2016 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395 smi_0202 6984d94c54ead29f710ffca08d5d8e7b 383 SUPERFAMILY SSF51556 53 351 5.56E-93 T 26-04-2016 IPR032466 Metal-dependent hydrolase smi_0202 6984d94c54ead29f710ffca08d5d8e7b 383 Pfam PF01979 Amidohydrolase family 50 367 1.0E-19 T 26-04-2016 IPR006680 Amidohydrolase-related GO:0016787 smi_0202 6984d94c54ead29f710ffca08d5d8e7b 383 Gene3D G3DSA:2.30.40.10 336 367 3.9E-8 T 26-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 smi_1848 4d23fa652a03485935b4fb7bfc083e14 1298 Gene3D G3DSA:2.60.40.10 457 599 3.9E-18 T 26-04-2016 IPR013783 Immunoglobulin-like fold smi_1848 4d23fa652a03485935b4fb7bfc083e14 1298 Pfam PF00128 Alpha amylase, catalytic domain 620 727 1.4E-14 T 26-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 smi_1848 4d23fa652a03485935b4fb7bfc083e14 1298 Pfam PF00128 Alpha amylase, catalytic domain 758 957 5.1E-5 T 26-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 smi_1848 4d23fa652a03485935b4fb7bfc083e14 1298 Gene3D G3DSA:3.20.20.80 600 1043 8.0E-106 T 26-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 smi_1848 4d23fa652a03485935b4fb7bfc083e14 1298 TIGRFAM TIGR01168 YSIRK_signal: gram-positive signal peptide, YSIRK family 3 41 9.0E-6 T 26-04-2016 IPR005877 YSIRK Gram-positive signal peptide GO:0016020 smi_1848 4d23fa652a03485935b4fb7bfc083e14 1298 TIGRFAM TIGR01167 LPXTG_anchor: LPXTG cell wall anchor domain 1263 1298 1.3E-6 T 26-04-2016 IPR019931 LPXTG cell wall anchor domain smi_1848 4d23fa652a03485935b4fb7bfc083e14 1298 Pfam PF03714 Bacterial pullanase-associated domain 145 243 2.2E-13 T 26-04-2016 IPR005323 Bacterial pullanase-associated domain GO:0005975|GO:0030246 smi_1848 4d23fa652a03485935b4fb7bfc083e14 1298 Pfam PF03714 Bacterial pullanase-associated domain 252 353 1.7E-16 T 26-04-2016 IPR005323 Bacterial pullanase-associated domain GO:0005975|GO:0030246 smi_1848 4d23fa652a03485935b4fb7bfc083e14 1298 SUPERFAMILY SSF81296 453 574 1.65E-16 T 26-04-2016 IPR014756 Immunoglobulin E-set smi_1848 4d23fa652a03485935b4fb7bfc083e14 1298 Pfam PF04650 YSIRK type signal peptide 9 34 1.4E-8 T 26-04-2016 IPR005877 YSIRK Gram-positive signal peptide GO:0016020 smi_1848 4d23fa652a03485935b4fb7bfc083e14 1298 TIGRFAM TIGR02102 pullulan_Gpos: pullulanase, extracellular 140 1297 0.0 T 26-04-2016 IPR011838 Pullulanase, extracellular smi_1848 4d23fa652a03485935b4fb7bfc083e14 1298 PANTHER PTHR10357:SF99 449 834 1.4E-156 T 26-04-2016 smi_1848 4d23fa652a03485935b4fb7bfc083e14 1298 PANTHER PTHR10357:SF99 997 1147 1.4E-156 T 26-04-2016 smi_1848 4d23fa652a03485935b4fb7bfc083e14 1298 PANTHER PTHR10357:SF99 850 966 1.4E-156 T 26-04-2016 smi_1848 4d23fa652a03485935b4fb7bfc083e14 1298 SUPERFAMILY SSF51445 588 957 6.09E-101 T 26-04-2016 IPR017853 Glycoside hydrolase superfamily smi_1848 4d23fa652a03485935b4fb7bfc083e14 1298 SUPERFAMILY SSF51445 992 1042 6.09E-101 T 26-04-2016 IPR017853 Glycoside hydrolase superfamily smi_1848 4d23fa652a03485935b4fb7bfc083e14 1298 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 457 546 1.6E-11 T 26-04-2016 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 smi_1848 4d23fa652a03485935b4fb7bfc083e14 1298 SUPERFAMILY SSF49452 141 245 7.85E-30 T 26-04-2016 IPR013784 Carbohydrate-binding-like fold GO:0030246 smi_1848 4d23fa652a03485935b4fb7bfc083e14 1298 SUPERFAMILY SSF49452 248 358 3.07E-32 T 26-04-2016 IPR013784 Carbohydrate-binding-like fold GO:0030246 smi_1848 4d23fa652a03485935b4fb7bfc083e14 1298 SMART SM00642 599 989 4.0E-9 T 26-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 smi_1848 4d23fa652a03485935b4fb7bfc083e14 1298 PANTHER PTHR10357 449 834 1.4E-156 T 26-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 smi_1848 4d23fa652a03485935b4fb7bfc083e14 1298 PANTHER PTHR10357 997 1147 1.4E-156 T 26-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 smi_1848 4d23fa652a03485935b4fb7bfc083e14 1298 PANTHER PTHR10357 850 966 1.4E-156 T 26-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 smi_1081 e21f331bdedd5276715b4fea483f6bae 709 Pfam PF16921 Tex protein YqgF-like domain 308 434 1.4E-53 T 26-04-2016 IPR032639 Tex protein, YqgF-like domain smi_1081 e21f331bdedd5276715b4fea483f6bae 709 Pfam PF00575 S1 RNA binding domain 633 702 1.5E-14 T 26-04-2016 IPR003029 S1 domain GO:0003676 smi_1081 e21f331bdedd5276715b4fea483f6bae 709 Gene3D G3DSA:1.10.10.650 2 108 2.6E-38 T 26-04-2016 IPR023319 Tex-like protein, HTH domain smi_1081 e21f331bdedd5276715b4fea483f6bae 709 Gene3D G3DSA:1.10.150.310 482 613 1.8E-43 T 26-04-2016 IPR023097 Tex RuvX-like domain smi_1081 e21f331bdedd5276715b4fea483f6bae 709 SUPERFAMILY SSF47781 453 541 1.56E-24 T 26-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 smi_1081 e21f331bdedd5276715b4fea483f6bae 709 SUPERFAMILY SSF158832 4 303 7.98E-97 T 26-04-2016 smi_1081 e21f331bdedd5276715b4fea483f6bae 709 SMART SM00316 632 703 1.1E-20 T 26-04-2016 IPR022967 RNA-binding domain, S1 smi_1081 e21f331bdedd5276715b4fea483f6bae 709 PANTHER PTHR10724 1 708 0.0 T 26-04-2016 smi_1081 e21f331bdedd5276715b4fea483f6bae 709 SUPERFAMILY SSF50249 619 704 1.19E-22 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold smi_1081 e21f331bdedd5276715b4fea483f6bae 709 SMART SM00732 308 407 2.4E-35 T 26-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 smi_1081 e21f331bdedd5276715b4fea483f6bae 709 Pfam PF12836 Helix-hairpin-helix motif 474 538 2.8E-25 T 26-04-2016 smi_1081 e21f331bdedd5276715b4fea483f6bae 709 SUPERFAMILY SSF47781 544 614 1.02E-15 T 26-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 smi_1081 e21f331bdedd5276715b4fea483f6bae 709 Gene3D G3DSA:3.30.420.140 308 433 6.3E-50 T 26-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 smi_1081 e21f331bdedd5276715b4fea483f6bae 709 SUPERFAMILY SSF53098 304 452 5.61E-48 T 26-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 smi_1081 e21f331bdedd5276715b4fea483f6bae 709 Gene3D G3DSA:1.10.3500.10 434 481 1.7E-82 T 26-04-2016 IPR023323 Tex-like domain smi_1081 e21f331bdedd5276715b4fea483f6bae 709 Gene3D G3DSA:1.10.3500.10 109 304 1.7E-82 T 26-04-2016 IPR023323 Tex-like domain smi_1081 e21f331bdedd5276715b4fea483f6bae 709 Gene3D G3DSA:2.40.50.140 621 703 2.3E-25 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold smi_1081 e21f331bdedd5276715b4fea483f6bae 709 PANTHER PTHR10724:SF1 1 708 0.0 T 26-04-2016 smi_1081 e21f331bdedd5276715b4fea483f6bae 709 Pfam PF09371 Tex-like protein N-terminal domain 8 189 3.9E-59 T 26-04-2016 IPR018974 Tex-like protein, N-terminal smi_1642 1e899546fc74f6f6a3c70b6667befc53 186 SUPERFAMILY SSF82861 23 114 1.07E-16 T 26-04-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 smi_1642 1e899546fc74f6f6a3c70b6667befc53 186 Gene3D G3DSA:2.30.30.60 132 178 9.1E-10 T 26-04-2016 smi_1642 1e899546fc74f6f6a3c70b6667befc53 186 Pfam PF00924 Mechanosensitive ion channel 73 184 7.4E-29 T 26-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 smi_1642 1e899546fc74f6f6a3c70b6667befc53 186 SUPERFAMILY SSF50182 116 182 1.14E-10 T 26-04-2016 IPR010920 LSM domain smi_1642 1e899546fc74f6f6a3c70b6667befc53 186 PANTHER PTHR30460 1 186 1.1E-68 T 26-04-2016 smi_0113 4a86dfa9c07498be85b6e286a80eb2c6 567 PANTHER PTHR21000 10 564 0.0 T 26-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 smi_0113 4a86dfa9c07498be85b6e286a80eb2c6 567 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 466 477 - T 26-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 smi_0113 4a86dfa9c07498be85b6e286a80eb2c6 567 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 125 135 - T 26-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 smi_0113 4a86dfa9c07498be85b6e286a80eb2c6 567 SUPERFAMILY SSF143975 7 379 4.97E-135 T 26-04-2016 smi_0113 4a86dfa9c07498be85b6e286a80eb2c6 567 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 20 557 1.1E-215 T 26-04-2016 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 smi_0113 4a86dfa9c07498be85b6e286a80eb2c6 567 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 8 557 44.848 T 26-04-2016 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 smi_0113 4a86dfa9c07498be85b6e286a80eb2c6 567 SUPERFAMILY SSF52016 381 560 9.42E-56 T 26-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel smi_0113 4a86dfa9c07498be85b6e286a80eb2c6 567 Pfam PF00920 Dehydratase family 38 554 6.0E-208 T 26-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 smi_0113 4a86dfa9c07498be85b6e286a80eb2c6 567 PANTHER PTHR21000:SF5 10 564 0.0 T 26-04-2016 smi_1332 1baa0c16e5d86ed34cbb120471cc3f60 340 Pfam PF00877 NlpC/P60 family 230 336 1.3E-27 T 26-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- smi_1332 1baa0c16e5d86ed34cbb120471cc3f60 340 Gene3D G3DSA:1.10.530.10 50 150 2.5E-8 T 26-04-2016 smi_1332 1baa0c16e5d86ed34cbb120471cc3f60 340 Gene3D G3DSA:3.90.1720.10 214 338 1.0E-40 T 26-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- smi_1332 1baa0c16e5d86ed34cbb120471cc3f60 340 SUPERFAMILY SSF54001 215 338 1.91E-38 T 26-04-2016 smi_1332 1baa0c16e5d86ed34cbb120471cc3f60 340 Pfam PF13702 Lysozyme-like 49 204 1.3E-59 T 26-04-2016 smi_1332 1baa0c16e5d86ed34cbb120471cc3f60 340 SUPERFAMILY SSF53955 55 155 5.62E-9 T 26-04-2016 IPR023346 Lysozyme-like domain smi_1332 1baa0c16e5d86ed34cbb120471cc3f60 340 PANTHER PTHR21666 186 338 1.4E-31 T 26-04-2016 smi_1432 219dbb0e2d227b42ba274e92d5b32d27 747 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 204 710 4.7E-94 T 26-04-2016 IPR001757 P-type ATPase GO:0016021 smi_1432 219dbb0e2d227b42ba274e92d5b32d27 747 SUPERFAMILY SSF56784 493 738 7.7E-59 T 26-04-2016 IPR023214 HAD-like domain smi_1432 219dbb0e2d227b42ba274e92d5b32d27 747 SUPERFAMILY SSF56784 438 458 7.7E-59 T 26-04-2016 IPR023214 HAD-like domain smi_1432 219dbb0e2d227b42ba274e92d5b32d27 747 PANTHER PTHR24093 73 741 3.4E-242 T 26-04-2016 smi_1432 219dbb0e2d227b42ba274e92d5b32d27 747 Gene3D G3DSA:2.70.150.10 171 332 3.1E-32 T 26-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 smi_1432 219dbb0e2d227b42ba274e92d5b32d27 747 SUPERFAMILY SSF49503 18 94 1.62E-5 T 26-04-2016 IPR008972 Cupredoxin smi_1432 219dbb0e2d227b42ba274e92d5b32d27 747 Gene3D G3DSA:3.40.50.1000 411 456 1.4E-54 T 26-04-2016 IPR023214 HAD-like domain smi_1432 219dbb0e2d227b42ba274e92d5b32d27 747 Gene3D G3DSA:3.40.50.1000 562 701 1.4E-54 T 26-04-2016 IPR023214 HAD-like domain smi_1432 219dbb0e2d227b42ba274e92d5b32d27 747 ProSitePatterns PS01229 Hypothetical cof family signature 2. 633 655 - T 26-04-2016 smi_1432 219dbb0e2d227b42ba274e92d5b32d27 747 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 282 296 2.7E-30 T 26-04-2016 smi_1432 219dbb0e2d227b42ba274e92d5b32d27 747 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 559 570 2.7E-30 T 26-04-2016 smi_1432 219dbb0e2d227b42ba274e92d5b32d27 747 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 440 454 2.7E-30 T 26-04-2016 smi_1432 219dbb0e2d227b42ba274e92d5b32d27 747 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 656 668 2.7E-30 T 26-04-2016 smi_1432 219dbb0e2d227b42ba274e92d5b32d27 747 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 633 652 2.7E-30 T 26-04-2016 smi_1432 219dbb0e2d227b42ba274e92d5b32d27 747 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 581 591 2.7E-30 T 26-04-2016 smi_1432 219dbb0e2d227b42ba274e92d5b32d27 747 PANTHER PTHR24093:SF50 73 741 3.4E-242 T 26-04-2016 smi_1432 219dbb0e2d227b42ba274e92d5b32d27 747 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 442 448 - T 26-04-2016 IPR018303 P-type ATPase, phosphorylation site smi_1432 219dbb0e2d227b42ba274e92d5b32d27 747 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 153 741 7.6E-186 T 26-04-2016 smi_1432 219dbb0e2d227b42ba274e92d5b32d27 747 SUPERFAMILY SSF81653 236 332 1.31E-27 T 26-04-2016 smi_1432 219dbb0e2d227b42ba274e92d5b32d27 747 SUPERFAMILY SSF81665 333 440 2.09E-15 T 26-04-2016 smi_1432 219dbb0e2d227b42ba274e92d5b32d27 747 SUPERFAMILY SSF81665 682 702 2.09E-15 T 26-04-2016 smi_1432 219dbb0e2d227b42ba274e92d5b32d27 747 SUPERFAMILY SSF81665 187 236 2.09E-15 T 26-04-2016 smi_1432 219dbb0e2d227b42ba274e92d5b32d27 747 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 172 741 3.1E-192 T 26-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 smi_1432 219dbb0e2d227b42ba274e92d5b32d27 747 Gene3D G3DSA:2.60.40.420 10 88 2.1E-4 T 26-04-2016 IPR008972 Cupredoxin smi_1432 219dbb0e2d227b42ba274e92d5b32d27 747 Pfam PF13473 Cupredoxin-like domain 10 97 5.9E-10 T 26-04-2016 IPR028096 EfeO-type cupredoxin-like domain smi_1432 219dbb0e2d227b42ba274e92d5b32d27 747 Gene3D G3DSA:3.40.1110.10 460 561 1.2E-21 T 26-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 smi_1432 219dbb0e2d227b42ba274e92d5b32d27 747 PRINTS PR00943 Copper-transporting ATPase signature 706 720 2.0E-5 T 26-04-2016 smi_1432 219dbb0e2d227b42ba274e92d5b32d27 747 PRINTS PR00943 Copper-transporting ATPase signature 202 221 2.0E-5 T 26-04-2016 smi_1432 219dbb0e2d227b42ba274e92d5b32d27 747 PRINTS PR00943 Copper-transporting ATPase signature 611 628 2.0E-5 T 26-04-2016 smi_1432 219dbb0e2d227b42ba274e92d5b32d27 747 PRINTS PR00943 Copper-transporting ATPase signature 355 369 2.0E-5 T 26-04-2016 smi_1432 219dbb0e2d227b42ba274e92d5b32d27 747 Pfam PF00702 haloacid dehalogenase-like hydrolase 436 647 1.1E-45 T 26-04-2016 smi_1432 219dbb0e2d227b42ba274e92d5b32d27 747 Pfam PF00122 E1-E2 ATPase 203 430 2.6E-66 T 26-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 smi_2044 6e5ced8239234ed015e82f62b6ed9035 352 SUPERFAMILY SSF52374 3 150 4.86E-21 T 26-04-2016 smi_2044 6e5ced8239234ed015e82f62b6ed9035 352 Gene3D G3DSA:3.40.50.300 160 341 1.2E-54 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_2044 6e5ced8239234ed015e82f62b6ed9035 352 PIRSF PIRSF004776 1 352 3.9E-77 T 26-04-2016 IPR016429 Bifunctional transcriptional regulator NadR GO:0045892 KEGG: 00760+2.7.7.1+2.7.1.22|UniPathway: UPA00253|UniPathway: UPA00253 smi_2044 6e5ced8239234ed015e82f62b6ed9035 352 Pfam PF13521 AAA domain 162 317 3.5E-17 T 26-04-2016 smi_2044 6e5ced8239234ed015e82f62b6ed9035 352 SUPERFAMILY SSF52540 156 309 7.0E-13 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_2044 6e5ced8239234ed015e82f62b6ed9035 352 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 6 38 3.3E-11 T 26-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 smi_2044 6e5ced8239234ed015e82f62b6ed9035 352 Gene3D G3DSA:3.40.50.620 2 158 3.1E-41 T 26-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold smi_2044 6e5ced8239234ed015e82f62b6ed9035 352 PANTHER PTHR37512 1 351 2.1E-30 T 26-04-2016 smi_2044 6e5ced8239234ed015e82f62b6ed9035 352 Pfam PF01467 Cytidylyltransferase-like 8 142 2.0E-10 T 26-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 smi_0135 7433fd5a63d8a9f7c42ea9fa68aecd78 752 Gene3D G3DSA:3.40.50.2000 422 736 9.3E-117 T 26-04-2016 smi_0135 7433fd5a63d8a9f7c42ea9fa68aecd78 752 PANTHER PTHR11468:SF3 46 751 0.0 T 26-04-2016 smi_0135 7433fd5a63d8a9f7c42ea9fa68aecd78 752 SUPERFAMILY SSF53756 5 751 3.69E-257 T 26-04-2016 smi_0135 7433fd5a63d8a9f7c42ea9fa68aecd78 752 TIGRFAM TIGR02093 P_ylase: glycogen/starch/alpha-glucan phosphorylases 6 751 1.3E-293 T 26-04-2016 IPR011833 Glycogen/starch/alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 smi_0135 7433fd5a63d8a9f7c42ea9fa68aecd78 752 PANTHER PTHR11468 46 751 0.0 T 26-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 smi_0135 7433fd5a63d8a9f7c42ea9fa68aecd78 752 PIRSF PIRSF000460 1 752 8.2E-215 T 26-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 smi_0135 7433fd5a63d8a9f7c42ea9fa68aecd78 752 Gene3D G3DSA:3.40.50.2000 4 421 2.6E-142 T 26-04-2016 smi_0135 7433fd5a63d8a9f7c42ea9fa68aecd78 752 ProSitePatterns PS00102 Phosphorylase pyridoxal-phosphate attachment site. 595 607 - T 26-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 smi_0135 7433fd5a63d8a9f7c42ea9fa68aecd78 752 Pfam PF00343 Carbohydrate phosphorylase 79 751 2.5E-263 T 26-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 smi_0127 06c11a837c84de40c5152f4db453ef4d 587 Gene3D G3DSA:3.30.1360.30 280 408 1.5E-46 T 26-04-2016 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 smi_0127 06c11a837c84de40c5152f4db453ef4d 587 Pfam PF01336 OB-fold nucleic acid binding domain 20 103 5.8E-15 T 26-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 smi_0127 06c11a837c84de40c5152f4db453ef4d 587 Hamap MF_00044 Aspartate--tRNA(Asp) ligase [aspS]. 2 558 35.29 T 26-04-2016 smi_0127 06c11a837c84de40c5152f4db453ef4d 587 Gene3D G3DSA:2.40.50.140 1 108 1.7E-37 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold smi_0127 06c11a837c84de40c5152f4db453ef4d 587 PRINTS PR01042 Aspartyl-tRNA synthetase signature 513 527 9.2E-24 T 26-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 smi_0127 06c11a837c84de40c5152f4db453ef4d 587 PRINTS PR01042 Aspartyl-tRNA synthetase signature 210 223 9.2E-24 T 26-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 smi_0127 06c11a837c84de40c5152f4db453ef4d 587 PRINTS PR01042 Aspartyl-tRNA synthetase signature 193 205 9.2E-24 T 26-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 smi_0127 06c11a837c84de40c5152f4db453ef4d 587 PRINTS PR01042 Aspartyl-tRNA synthetase signature 469 485 9.2E-24 T 26-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 smi_0127 06c11a837c84de40c5152f4db453ef4d 587 PANTHER PTHR22594 381 566 1.8E-245 T 26-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 smi_0127 06c11a837c84de40c5152f4db453ef4d 587 PANTHER PTHR22594 330 349 1.8E-245 T 26-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 smi_0127 06c11a837c84de40c5152f4db453ef4d 587 PANTHER PTHR22594 1 300 1.8E-245 T 26-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 smi_0127 06c11a837c84de40c5152f4db453ef4d 587 PANTHER PTHR22594:SF5 381 566 1.8E-245 T 26-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 smi_0127 06c11a837c84de40c5152f4db453ef4d 587 PANTHER PTHR22594:SF5 330 349 1.8E-245 T 26-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 smi_0127 06c11a837c84de40c5152f4db453ef4d 587 PANTHER PTHR22594:SF5 1 300 1.8E-245 T 26-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 smi_0127 06c11a837c84de40c5152f4db453ef4d 587 Pfam PF02938 GAD domain 315 400 1.0E-23 T 26-04-2016 IPR029351 GAD domain smi_0127 06c11a837c84de40c5152f4db453ef4d 587 SUPERFAMILY SSF55261 292 414 6.54E-35 T 26-04-2016 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 smi_0127 06c11a837c84de40c5152f4db453ef4d 587 SUPERFAMILY SSF55681 419 578 2.87E-103 T 26-04-2016 smi_0127 06c11a837c84de40c5152f4db453ef4d 587 SUPERFAMILY SSF55681 117 295 2.87E-103 T 26-04-2016 smi_0127 06c11a837c84de40c5152f4db453ef4d 587 SUPERFAMILY SSF50249 2 110 2.48E-29 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold smi_0127 06c11a837c84de40c5152f4db453ef4d 587 Gene3D G3DSA:3.30.930.10 134 279 5.2E-110 T 26-04-2016 smi_0127 06c11a837c84de40c5152f4db453ef4d 587 Gene3D G3DSA:3.30.930.10 409 580 5.2E-110 T 26-04-2016 smi_0127 06c11a837c84de40c5152f4db453ef4d 587 Pfam PF00152 tRNA synthetases class II (D, K and N) 121 552 4.8E-106 T 26-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 smi_0127 06c11a837c84de40c5152f4db453ef4d 587 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 1 578 3.2E-230 T 26-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 smi_1218 6d35fae4175f29b0c03652512c022599 520 PANTHER PTHR10277 2 509 9.8E-227 T 26-04-2016 smi_1218 6d35fae4175f29b0c03652512c022599 520 SUPERFAMILY SSF110921 401 496 1.7E-16 T 26-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 smi_1218 6d35fae4175f29b0c03652512c022599 520 SMART SM00917 368 501 8.1E-28 T 26-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 smi_1218 6d35fae4175f29b0c03652512c022599 520 Hamap MF_01025 2-isopropylmalate synthase [leuA]. 1 510 39.587 T 26-04-2016 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 smi_1218 6d35fae4175f29b0c03652512c022599 520 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 11 27 - T 26-04-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 smi_1218 6d35fae4175f29b0c03652512c022599 520 PANTHER PTHR10277:SF9 2 509 9.8E-227 T 26-04-2016 smi_1218 6d35fae4175f29b0c03652512c022599 520 TIGRFAM TIGR00973 leuA_bact: 2-isopropylmalate synthase 4 496 7.7E-193 T 26-04-2016 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 smi_1218 6d35fae4175f29b0c03652512c022599 520 Gene3D G3DSA:3.20.20.70 2 344 1.4E-138 T 26-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 smi_1218 6d35fae4175f29b0c03652512c022599 520 Pfam PF00682 HMGL-like 4 272 2.1E-98 T 26-04-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 smi_1218 6d35fae4175f29b0c03652512c022599 520 Pfam PF08502 LeuA allosteric (dimerisation) domain 368 496 1.5E-29 T 26-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 smi_1218 6d35fae4175f29b0c03652512c022599 520 SUPERFAMILY SSF51569 2 290 2.75E-95 T 26-04-2016 smi_1600 426f8d6ca68efe5934c2ca4b4bd05ad6 749 PANTHER PTHR30519 1 749 0.0 T 26-04-2016 smi_1600 426f8d6ca68efe5934c2ca4b4bd05ad6 749 TIGRFAM TIGR01371 met_syn_B12ind: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase 6 748 0.0 T 26-04-2016 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 smi_1600 426f8d6ca68efe5934c2ca4b4bd05ad6 749 PANTHER PTHR30519:SF0 1 749 0.0 T 26-04-2016 smi_1600 426f8d6ca68efe5934c2ca4b4bd05ad6 749 SUPERFAMILY SSF51726 385 747 3.92E-108 T 26-04-2016 smi_1600 426f8d6ca68efe5934c2ca4b4bd05ad6 749 PIRSF PIRSF000382 1 749 2.6E-302 T 26-04-2016 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 smi_1600 426f8d6ca68efe5934c2ca4b4bd05ad6 749 Gene3D G3DSA:3.20.20.210 1 379 8.0E-129 T 26-04-2016 smi_1600 426f8d6ca68efe5934c2ca4b4bd05ad6 749 Hamap MF_00172 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [metE]. 1 748 33.771 T 26-04-2016 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 smi_1600 426f8d6ca68efe5934c2ca4b4bd05ad6 749 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 420 743 1.0E-134 T 26-04-2016 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 smi_1600 426f8d6ca68efe5934c2ca4b4bd05ad6 749 SUPERFAMILY SSF51726 1 372 1.57E-91 T 26-04-2016 smi_1600 426f8d6ca68efe5934c2ca4b4bd05ad6 749 Gene3D G3DSA:3.20.20.210 383 749 1.7E-123 T 26-04-2016 smi_1600 426f8d6ca68efe5934c2ca4b4bd05ad6 749 Pfam PF08267 Cobalamin-independent synthase, N-terminal domain 3 311 3.5E-114 T 26-04-2016 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal GO:0003871|GO:0008270|GO:0008652 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 smi_0893 b98c615bdc95a846e55c4bab011bd72d 511 SMART SM00382 31 219 1.8E-16 T 26-04-2016 IPR003593 AAA+ ATPase domain smi_0893 b98c615bdc95a846e55c4bab011bd72d 511 SMART SM00382 284 480 12.0 T 26-04-2016 IPR003593 AAA+ ATPase domain smi_0893 b98c615bdc95a846e55c4bab011bd72d 511 Gene3D G3DSA:3.40.50.300 3 231 5.8E-64 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0893 b98c615bdc95a846e55c4bab011bd72d 511 Gene3D G3DSA:3.40.50.300 254 494 5.3E-47 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0893 b98c615bdc95a846e55c4bab011bd72d 511 PANTHER PTHR24220 8 384 7.1E-194 T 26-04-2016 smi_0893 b98c615bdc95a846e55c4bab011bd72d 511 Pfam PF00005 ABC transporter 23 171 4.4E-29 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 smi_0893 b98c615bdc95a846e55c4bab011bd72d 511 Pfam PF00005 ABC transporter 275 431 3.5E-17 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 smi_0893 b98c615bdc95a846e55c4bab011bd72d 511 ProSitePatterns PS00211 ABC transporters family signature. 404 418 - T 26-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 smi_0893 b98c615bdc95a846e55c4bab011bd72d 511 SUPERFAMILY SSF52540 5 226 1.08E-59 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0893 b98c615bdc95a846e55c4bab011bd72d 511 PANTHER PTHR24220:SF239 8 384 7.1E-194 T 26-04-2016 smi_0893 b98c615bdc95a846e55c4bab011bd72d 511 SUPERFAMILY SSF52540 257 490 7.72E-44 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1518 bc274c91795ad774cc3b22ac488b9fad 249 Gene3D G3DSA:3.40.50.150 35 247 1.5E-74 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase smi_1518 bc274c91795ad774cc3b22ac488b9fad 249 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 121 127 - T 26-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 smi_1518 bc274c91795ad774cc3b22ac488b9fad 249 PANTHER PTHR18895:SF75 1 243 2.4E-104 T 26-04-2016 smi_1518 bc274c91795ad774cc3b22ac488b9fad 249 SUPERFAMILY SSF53335 14 217 6.1E-31 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase smi_1518 bc274c91795ad774cc3b22ac488b9fad 249 Pfam PF05175 Methyltransferase small domain 22 175 2.6E-13 T 26-04-2016 IPR007848 Methyltransferase small domain GO:0008168 smi_1518 bc274c91795ad774cc3b22ac488b9fad 249 PANTHER PTHR18895 1 243 2.4E-104 T 26-04-2016 smi_0006 057fce240b7d36f9dcff631dd8e7b2c7 1169 SMART SM00982 1015 1115 1.2E-33 T 26-04-2016 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 smi_0006 057fce240b7d36f9dcff631dd8e7b2c7 1169 Pfam PF03461 TRCF domain 1016 1103 5.1E-24 T 26-04-2016 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 smi_0006 057fce240b7d36f9dcff631dd8e7b2c7 1169 SMART SM00487 609 799 1.3E-37 T 26-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain smi_0006 057fce240b7d36f9dcff631dd8e7b2c7 1169 Pfam PF00270 DEAD/DEAH box helicase 614 773 1.9E-20 T 26-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 smi_0006 057fce240b7d36f9dcff631dd8e7b2c7 1169 SUPERFAMILY SSF52540 533 792 1.32E-62 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0006 057fce240b7d36f9dcff631dd8e7b2c7 1169 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 36 1119 28.706 T 26-04-2016 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 smi_0006 057fce240b7d36f9dcff631dd8e7b2c7 1169 Gene3D G3DSA:3.30.2060.10 140 213 7.5E-17 T 26-04-2016 smi_0006 057fce240b7d36f9dcff631dd8e7b2c7 1169 SUPERFAMILY SSF143517 1007 1160 6.15E-30 T 26-04-2016 smi_0006 057fce240b7d36f9dcff631dd8e7b2c7 1169 SUPERFAMILY SSF141259 479 557 3.79E-24 T 26-04-2016 IPR003711 CarD-like/TRCF domain smi_0006 057fce240b7d36f9dcff631dd8e7b2c7 1169 Pfam PF00271 Helicase conserved C-terminal domain 815 918 9.3E-16 T 26-04-2016 IPR001650 Helicase, C-terminal smi_0006 057fce240b7d36f9dcff631dd8e7b2c7 1169 PANTHER PTHR14025 398 1129 0.0 T 26-04-2016 smi_0006 057fce240b7d36f9dcff631dd8e7b2c7 1169 SUPERFAMILY SSF52540 368 478 2.08E-19 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0006 057fce240b7d36f9dcff631dd8e7b2c7 1169 PANTHER PTHR14025:SF21 398 1129 0.0 T 26-04-2016 smi_0006 057fce240b7d36f9dcff631dd8e7b2c7 1169 SMART SM00490 835 919 4.5E-17 T 26-04-2016 IPR001650 Helicase, C-terminal smi_0006 057fce240b7d36f9dcff631dd8e7b2c7 1169 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 156 1088 0.0 T 26-04-2016 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 smi_0006 057fce240b7d36f9dcff631dd8e7b2c7 1169 SUPERFAMILY SSF52540 791 996 2.32E-45 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0006 057fce240b7d36f9dcff631dd8e7b2c7 1169 Gene3D G3DSA:3.40.50.300 806 965 2.5E-35 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0006 057fce240b7d36f9dcff631dd8e7b2c7 1169 Pfam PF02559 CarD-like/TRCF domain 489 584 8.9E-26 T 26-04-2016 IPR003711 CarD-like/TRCF domain smi_0006 057fce240b7d36f9dcff631dd8e7b2c7 1169 SMART SM01058 488 585 6.3E-43 T 26-04-2016 IPR003711 CarD-like/TRCF domain smi_0006 057fce240b7d36f9dcff631dd8e7b2c7 1169 SUPERFAMILY SSF52540 15 360 1.95E-69 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0006 057fce240b7d36f9dcff631dd8e7b2c7 1169 Gene3D G3DSA:3.40.50.300 597 795 2.0E-57 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0481 6d2ce3e6a0ae633c636d20bb59959ca2 94 SUPERFAMILY SSF50129 1 93 5.3E-25 T 26-04-2016 IPR011032 GroES-like smi_0481 6d2ce3e6a0ae633c636d20bb59959ca2 94 Hamap MF_00580 10 kDa chaperonin [groS]. 1 93 19.309 T 26-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 smi_0481 6d2ce3e6a0ae633c636d20bb59959ca2 94 Pfam PF00166 Chaperonin 10 Kd subunit 2 92 4.0E-23 T 26-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 smi_0481 6d2ce3e6a0ae633c636d20bb59959ca2 94 PRINTS PR00297 10kDa chaperonin signature 79 92 3.6E-20 T 26-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 smi_0481 6d2ce3e6a0ae633c636d20bb59959ca2 94 PRINTS PR00297 10kDa chaperonin signature 2 17 3.6E-20 T 26-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 smi_0481 6d2ce3e6a0ae633c636d20bb59959ca2 94 PRINTS PR00297 10kDa chaperonin signature 23 44 3.6E-20 T 26-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 smi_0481 6d2ce3e6a0ae633c636d20bb59959ca2 94 PRINTS PR00297 10kDa chaperonin signature 58 70 3.6E-20 T 26-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 smi_0481 6d2ce3e6a0ae633c636d20bb59959ca2 94 SMART SM00883 1 92 7.9E-38 T 26-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 smi_0481 6d2ce3e6a0ae633c636d20bb59959ca2 94 PANTHER PTHR10772 2 94 5.0E-24 T 26-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 smi_0481 6d2ce3e6a0ae633c636d20bb59959ca2 94 ProSitePatterns PS00681 Chaperonins cpn10 signature. 2 25 - T 26-04-2016 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 smi_0481 6d2ce3e6a0ae633c636d20bb59959ca2 94 Gene3D G3DSA:2.30.33.40 2 93 8.7E-26 T 26-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 smi_1866 3bb6d7690053043a0b77fe5e426b545e 138 Gene3D G3DSA:3.40.630.30 1 128 1.8E-34 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase smi_1866 3bb6d7690053043a0b77fe5e426b545e 138 PANTHER PTHR23091 1 127 1.4E-23 T 26-04-2016 smi_1866 3bb6d7690053043a0b77fe5e426b545e 138 PANTHER PTHR23091:SF228 1 127 1.4E-23 T 26-04-2016 smi_1866 3bb6d7690053043a0b77fe5e426b545e 138 Pfam PF13673 Acetyltransferase (GNAT) domain 34 122 3.2E-14 T 26-04-2016 IPR000182 GNAT domain GO:0008080 smi_1866 3bb6d7690053043a0b77fe5e426b545e 138 SUPERFAMILY SSF55729 1 129 8.54E-28 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase smi_1512 9cd86996e6418cc2dcc0495d80b6557c 481 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 2 481 27.44 T 26-04-2016 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 UniPathway: UPA00219 smi_1512 9cd86996e6418cc2dcc0495d80b6557c 481 PANTHER PTHR23135:SF4 22 481 1.0E-136 T 26-04-2016 smi_1512 9cd86996e6418cc2dcc0495d80b6557c 481 Gene3D G3DSA:3.40.1390.10 31 106 2.7E-9 T 26-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 smi_1512 9cd86996e6418cc2dcc0495d80b6557c 481 PANTHER PTHR23135 22 481 1.0E-136 T 26-04-2016 smi_1512 9cd86996e6418cc2dcc0495d80b6557c 481 Gene3D G3DSA:3.40.1190.10 107 331 6.8E-50 T 26-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 smi_1512 9cd86996e6418cc2dcc0495d80b6557c 481 Pfam PF02875 Mur ligase family, glutamate ligase domain 328 411 5.0E-16 T 26-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 smi_1512 9cd86996e6418cc2dcc0495d80b6557c 481 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 36 478 5.7E-87 T 26-04-2016 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 UniPathway: UPA00219 smi_1512 9cd86996e6418cc2dcc0495d80b6557c 481 Gene3D G3DSA:3.90.190.20 332 470 3.5E-32 T 26-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 smi_1512 9cd86996e6418cc2dcc0495d80b6557c 481 SUPERFAMILY SSF53244 328 477 4.06E-29 T 26-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 smi_1512 9cd86996e6418cc2dcc0495d80b6557c 481 SUPERFAMILY SSF53623 79 340 2.88E-45 T 26-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 smi_1512 9cd86996e6418cc2dcc0495d80b6557c 481 Pfam PF08245 Mur ligase middle domain 117 308 1.2E-33 T 26-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 smi_1512 9cd86996e6418cc2dcc0495d80b6557c 481 SUPERFAMILY SSF63418 18 107 6.28E-17 T 26-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 smi_0670 01f7acbddd10fd56452b22711b1a4593 97 PANTHER PTHR39163:SF1 28 97 1.3E-25 T 26-04-2016 smi_0670 01f7acbddd10fd56452b22711b1a4593 97 SUPERFAMILY SSF54862 30 92 8.1E-6 T 26-04-2016 smi_0670 01f7acbddd10fd56452b22711b1a4593 97 Pfam PF13370 4Fe-4S single cluster domain of Ferredoxin I 37 90 3.4E-8 T 26-04-2016 smi_0670 01f7acbddd10fd56452b22711b1a4593 97 PANTHER PTHR39163 28 97 1.3E-25 T 26-04-2016 smi_0670 01f7acbddd10fd56452b22711b1a4593 97 Gene3D G3DSA:3.30.70.20 29 92 3.0E-15 T 26-04-2016 smi_2066 8b3cda9880e6a9f7d22ac205942baa48 264 Pfam PF02361 Cobalt transport protein 14 234 3.5E-44 T 26-04-2016 IPR003339 ABC/ECF transporter, transmembrane component smi_2066 8b3cda9880e6a9f7d22ac205942baa48 264 Hamap MF_01461 Energy-coupling factor transporter transmembrane protein EcfT [ecfT]. 1 264 34.679 T 26-04-2016 IPR024919 ECF transporter transmembrane protein EcfT GO:0005215|GO:0006810|GO:0016021 smi_2066 8b3cda9880e6a9f7d22ac205942baa48 264 PANTHER PTHR33514:SF2 1 264 2.1E-108 T 26-04-2016 smi_2066 8b3cda9880e6a9f7d22ac205942baa48 264 PANTHER PTHR33514 1 264 2.1E-108 T 26-04-2016 smi_2027 d94430f5d4f103bdb33c8b2303ab89e1 146 Pfam PF01047 MarR family 36 92 6.2E-14 T 26-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 smi_2027 d94430f5d4f103bdb33c8b2303ab89e1 146 SMART SM00347 29 131 1.1E-16 T 26-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 smi_2027 d94430f5d4f103bdb33c8b2303ab89e1 146 SMART SM00418 34 109 0.0017 T 26-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 smi_2027 d94430f5d4f103bdb33c8b2303ab89e1 146 SUPERFAMILY SSF46785 9 143 2.58E-25 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain smi_2027 d94430f5d4f103bdb33c8b2303ab89e1 146 PANTHER PTHR18964:SF125 1 146 3.8E-33 T 26-04-2016 smi_2027 d94430f5d4f103bdb33c8b2303ab89e1 146 PANTHER PTHR18964 1 146 3.8E-33 T 26-04-2016 smi_2027 d94430f5d4f103bdb33c8b2303ab89e1 146 Gene3D G3DSA:1.10.10.10 10 143 1.4E-25 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain smi_1197 732fe288051e75e599ca248eedd7816e 171 PIRSF PIRSF037847 1 171 2.8E-63 T 26-04-2016 IPR026043 Transcription repressor NadR smi_1197 732fe288051e75e599ca248eedd7816e 171 Pfam PF08279 HTH domain 5 58 4.2E-15 T 26-04-2016 IPR013196 Helix-turn-helix, type 11 smi_1197 732fe288051e75e599ca248eedd7816e 171 Gene3D G3DSA:1.10.10.10 1 60 6.9E-20 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain smi_1197 732fe288051e75e599ca248eedd7816e 171 SUPERFAMILY SSF46785 3 59 9.66E-10 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain smi_1197 732fe288051e75e599ca248eedd7816e 171 Gene3D G3DSA:3.30.1340.20 67 170 1.5E-40 T 26-04-2016 IPR004173 3H domain GO:0036094 smi_1197 732fe288051e75e599ca248eedd7816e 171 SUPERFAMILY SSF75500 67 170 9.02E-35 T 26-04-2016 IPR004173 3H domain GO:0036094 smi_1197 732fe288051e75e599ca248eedd7816e 171 ProDom PD469575 TRANSCRIPTION DNA-BINDING REGULATION TRANSCRIPTIONAL REGULATOR REPRESSOR FAMILY BIOTIN REGULATOR 3H 75 169 1.0E-47 T 26-04-2016 IPR004173 3H domain GO:0036094 smi_1197 732fe288051e75e599ca248eedd7816e 171 PANTHER PTHR40068 1 171 9.0E-79 T 26-04-2016 smi_1197 732fe288051e75e599ca248eedd7816e 171 Pfam PF02829 3H domain 72 168 7.9E-32 T 26-04-2016 IPR004173 3H domain GO:0036094 smi_1910 d0aa2ab0d34d01c760e04eab7113e4bf 168 Pfam PF13302 Acetyltransferase (GNAT) domain 2 148 1.6E-12 T 26-04-2016 IPR000182 GNAT domain GO:0008080 smi_1910 d0aa2ab0d34d01c760e04eab7113e4bf 168 SUPERFAMILY SSF55729 1 156 1.64E-18 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase smi_1910 d0aa2ab0d34d01c760e04eab7113e4bf 168 PANTHER PTHR39173 1 166 7.4E-52 T 26-04-2016 smi_1910 d0aa2ab0d34d01c760e04eab7113e4bf 168 Gene3D G3DSA:3.40.630.30 2 157 4.4E-21 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase smi_0805 3d4f4ffef9f17ceb723facd3b719d9e3 591 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 6 68 1.6E-11 T 26-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 smi_0805 3d4f4ffef9f17ceb723facd3b719d9e3 591 Gene3D G3DSA:1.10.1140.10 539 588 3.8E-26 T 26-04-2016 IPR024034 ATPase, F1 complex beta subunit/V1 complex, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 smi_0805 3d4f4ffef9f17ceb723facd3b719d9e3 591 Gene3D G3DSA:1.10.1140.10 452 507 3.8E-26 T 26-04-2016 IPR024034 ATPase, F1 complex beta subunit/V1 complex, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 smi_0805 3d4f4ffef9f17ceb723facd3b719d9e3 591 Pfam PF16886 ATPsynthase alpha/beta subunit N-term extension 84 204 1.8E-41 T 26-04-2016 IPR031686 ATPsynthase alpha/beta subunit, N-terminal extension KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 smi_0805 3d4f4ffef9f17ceb723facd3b719d9e3 591 PANTHER PTHR15184 183 578 1.2E-255 T 26-04-2016 smi_0805 3d4f4ffef9f17ceb723facd3b719d9e3 591 PANTHER PTHR15184 132 137 1.2E-255 T 26-04-2016 smi_0805 3d4f4ffef9f17ceb723facd3b719d9e3 591 SUPERFAMILY SSF50615 3 71 2.88E-11 T 26-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 smi_0805 3d4f4ffef9f17ceb723facd3b719d9e3 591 PANTHER PTHR15184:SF7 183 578 1.2E-255 T 26-04-2016 smi_0805 3d4f4ffef9f17ceb723facd3b719d9e3 591 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 427 436 - T 26-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 smi_0805 3d4f4ffef9f17ceb723facd3b719d9e3 591 PANTHER PTHR15184 2 93 1.2E-255 T 26-04-2016 smi_0805 3d4f4ffef9f17ceb723facd3b719d9e3 591 Hamap MF_00309 V-type ATP synthase alpha chain [atpA]. 1 589 49.786 T 26-04-2016 IPR022878 V-type ATP synthase catalytic alpha chain GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 smi_0805 3d4f4ffef9f17ceb723facd3b719d9e3 591 PANTHER PTHR15184:SF7 2 93 1.2E-255 T 26-04-2016 smi_0805 3d4f4ffef9f17ceb723facd3b719d9e3 591 PANTHER PTHR15184:SF7 132 137 1.2E-255 T 26-04-2016 smi_0805 3d4f4ffef9f17ceb723facd3b719d9e3 591 SUPERFAMILY SSF52540 162 441 3.43E-83 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0805 3d4f4ffef9f17ceb723facd3b719d9e3 591 SUPERFAMILY SSF47917 452 533 3.14E-23 T 26-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 smi_0805 3d4f4ffef9f17ceb723facd3b719d9e3 591 Gene3D G3DSA:3.40.50.300 148 436 3.8E-104 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0805 3d4f4ffef9f17ceb723facd3b719d9e3 591 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 213 436 4.8E-94 T 26-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 smi_1581 e6a587834c9d394960c86400edb710d8 615 SUPERFAMILY SSF46600 183 235 1.44E-12 T 26-04-2016 IPR001943 UVR domain GO:0005515 smi_1581 e6a587834c9d394960c86400edb710d8 615 SMART SM00465 15 95 4.4E-22 T 26-04-2016 IPR000305 GIY-YIG nuclease superfamily smi_1581 e6a587834c9d394960c86400edb710d8 615 Hamap MF_00203 UvrABC system protein C [uvrC]. 2 587 27.665 T 26-04-2016 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 smi_1581 e6a587834c9d394960c86400edb710d8 615 Gene3D G3DSA:4.10.860.10 178 235 5.0E-16 T 26-04-2016 IPR001943 UVR domain GO:0005515 smi_1581 e6a587834c9d394960c86400edb710d8 615 Pfam PF01541 GIY-YIG catalytic domain 17 90 4.3E-10 T 26-04-2016 IPR000305 GIY-YIG nuclease superfamily smi_1581 e6a587834c9d394960c86400edb710d8 615 PANTHER PTHR30562 2 588 2.6E-274 T 26-04-2016 smi_1581 e6a587834c9d394960c86400edb710d8 615 SUPERFAMILY SSF47781 503 591 9.85E-21 T 26-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 smi_1581 e6a587834c9d394960c86400edb710d8 615 Pfam PF02151 UvrB/uvrC motif 196 228 2.4E-6 T 26-04-2016 IPR001943 UVR domain GO:0005515 smi_1581 e6a587834c9d394960c86400edb710d8 615 PANTHER PTHR30562:SF1 2 588 2.6E-274 T 26-04-2016 smi_1581 e6a587834c9d394960c86400edb710d8 615 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 374 523 3.2E-49 T 26-04-2016 IPR001162 UvrC family homology region smi_1581 e6a587834c9d394960c86400edb710d8 615 SUPERFAMILY SSF82771 15 97 1.14E-22 T 26-04-2016 IPR000305 GIY-YIG nuclease superfamily smi_1581 e6a587834c9d394960c86400edb710d8 615 Gene3D G3DSA:3.40.1440.10 15 93 8.1E-9 T 26-04-2016 IPR027299 GIY-YIG domain smi_1581 e6a587834c9d394960c86400edb710d8 615 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 6 570 1.1E-198 T 26-04-2016 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 smi_1581 e6a587834c9d394960c86400edb710d8 615 Gene3D G3DSA:1.10.150.20 537 589 3.8E-21 T 26-04-2016 smi_0758 a2858c9f3e769fe8f7feaee8e1ffa7fa 388 Pfam PF01264 Chorismate synthase 1 363 2.7E-115 T 26-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 smi_0758 a2858c9f3e769fe8f7feaee8e1ffa7fa 388 Gene3D G3DSA:3.60.150.10 1 387 3.1E-148 T 26-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 smi_0758 a2858c9f3e769fe8f7feaee8e1ffa7fa 388 PANTHER PTHR21085:SF0 1 388 8.7E-183 T 26-04-2016 smi_0758 a2858c9f3e769fe8f7feaee8e1ffa7fa 388 PIRSF PIRSF001456 1 382 2.4E-123 T 26-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 smi_0758 a2858c9f3e769fe8f7feaee8e1ffa7fa 388 ProSitePatterns PS00789 Chorismate synthase signature 3. 337 353 - T 26-04-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 smi_0758 a2858c9f3e769fe8f7feaee8e1ffa7fa 388 ProSitePatterns PS00788 Chorismate synthase signature 2. 129 145 - T 26-04-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 smi_0758 a2858c9f3e769fe8f7feaee8e1ffa7fa 388 ProSitePatterns PS00787 Chorismate synthase signature 1. 7 22 - T 26-04-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 smi_0758 a2858c9f3e769fe8f7feaee8e1ffa7fa 388 Hamap MF_00300 Chorismate synthase [aroC]. 1 370 34.949 T 26-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 smi_0758 a2858c9f3e769fe8f7feaee8e1ffa7fa 388 TIGRFAM TIGR00033 aroC: chorismate synthase 1 368 1.3E-144 T 26-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 smi_0758 a2858c9f3e769fe8f7feaee8e1ffa7fa 388 SUPERFAMILY SSF103263 1 387 3.4E-146 T 26-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 smi_0758 a2858c9f3e769fe8f7feaee8e1ffa7fa 388 PANTHER PTHR21085 1 388 8.7E-183 T 26-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 smi_0463 4c9038cb744a7a2f585b7f5fb1f2f27e 220 PANTHER PTHR34700 6 220 1.4E-24 T 26-04-2016 smi_0463 4c9038cb744a7a2f585b7f5fb1f2f27e 220 SMART SM00257 171 220 7.9E-10 T 26-04-2016 IPR018392 LysM domain smi_0463 4c9038cb744a7a2f585b7f5fb1f2f27e 220 Pfam PF01476 LysM domain 172 220 8.3E-12 T 26-04-2016 IPR018392 LysM domain smi_0463 4c9038cb744a7a2f585b7f5fb1f2f27e 220 SUPERFAMILY SSF54106 170 220 7.32E-8 T 26-04-2016 IPR018392 LysM domain smi_0463 4c9038cb744a7a2f585b7f5fb1f2f27e 220 Gene3D G3DSA:3.10.350.10 171 220 8.6E-11 T 26-04-2016 IPR018392 LysM domain smi_0463 4c9038cb744a7a2f585b7f5fb1f2f27e 220 PANTHER PTHR34700:SF2 6 220 1.4E-24 T 26-04-2016 smi_1460 760253c6fde20541098f8e20fedb117d 244 SMART SM00382 32 220 2.2E-12 T 26-04-2016 IPR003593 AAA+ ATPase domain smi_1460 760253c6fde20541098f8e20fedb117d 244 SUPERFAMILY SSF52540 5 230 3.36E-70 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1460 760253c6fde20541098f8e20fedb117d 244 Gene3D G3DSA:3.40.50.300 4 234 2.2E-70 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1460 760253c6fde20541098f8e20fedb117d 244 PANTHER PTHR24220 5 244 1.3E-92 T 26-04-2016 smi_1460 760253c6fde20541098f8e20fedb117d 244 PANTHER PTHR24220:SF342 5 244 1.3E-92 T 26-04-2016 smi_1460 760253c6fde20541098f8e20fedb117d 244 Pfam PF00005 ABC transporter 23 171 9.1E-35 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 smi_0971 361db362f496f0a97604042b4a28f1a9 274 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 271 2.3E-102 T 26-04-2016 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 smi_0971 361db362f496f0a97604042b4a28f1a9 274 PANTHER PTHR22993 1 273 7.3E-122 T 26-04-2016 smi_0971 361db362f496f0a97604042b4a28f1a9 274 SMART SM01232 132 224 6.6E-40 T 26-04-2016 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 smi_0971 361db362f496f0a97604042b4a28f1a9 274 SUPERFAMILY SSF57716 220 272 4.81E-17 T 26-04-2016 smi_0971 361db362f496f0a97604042b4a28f1a9 274 SMART SM00898 2 116 1.7E-51 T 26-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 smi_0971 361db362f496f0a97604042b4a28f1a9 274 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 272 43.642 T 26-04-2016 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 smi_0971 361db362f496f0a97604042b4a28f1a9 274 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 132 222 3.3E-29 T 26-04-2016 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 smi_0971 361db362f496f0a97604042b4a28f1a9 274 PANTHER PTHR22993:SF15 1 273 7.3E-122 T 26-04-2016 smi_0971 361db362f496f0a97604042b4a28f1a9 274 SUPERFAMILY SSF81624 2 141 3.01E-41 T 26-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 smi_0971 361db362f496f0a97604042b4a28f1a9 274 Gene3D G3DSA:3.20.190.10 2 121 2.5E-38 T 26-04-2016 smi_0971 361db362f496f0a97604042b4a28f1a9 274 Gene3D G3DSA:1.10.8.50 132 272 3.1E-48 T 26-04-2016 smi_0971 361db362f496f0a97604042b4a28f1a9 274 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 115 4.5E-34 T 26-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 smi_0971 361db362f496f0a97604042b4a28f1a9 274 ProSitePatterns PS01242 Zinc finger FPG-type signature. 247 271 - T 26-04-2016 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 smi_0971 361db362f496f0a97604042b4a28f1a9 274 Pfam PF06827 Zinc finger found in FPG and IleRS 244 272 1.0E-10 T 26-04-2016 IPR010663 Zinc finger, FPG/IleRS-type smi_0971 361db362f496f0a97604042b4a28f1a9 274 SUPERFAMILY SSF46946 131 221 2.36E-28 T 26-04-2016 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 smi_1394 3fdc71d560dfdf1e371bd8ead04b8d80 85 PANTHER PTHR37300 1 78 3.1E-40 T 26-04-2016 smi_1394 3fdc71d560dfdf1e371bd8ead04b8d80 85 PANTHER PTHR37300:SF1 1 78 3.1E-40 T 26-04-2016 smi_1394 3fdc71d560dfdf1e371bd8ead04b8d80 85 Pfam PF05979 Bacterial protein of unknown function (DUF896) 4 67 4.1E-30 T 26-04-2016 IPR009242 Protein of unknown function DUF896 smi_1394 3fdc71d560dfdf1e371bd8ead04b8d80 85 SUPERFAMILY SSF158221 2 41 1.15E-13 T 26-04-2016 smi_1394 3fdc71d560dfdf1e371bd8ead04b8d80 85 Gene3D G3DSA:1.10.287.540 1 59 5.1E-29 T 26-04-2016 IPR023218 UPF0291 structural domain smi_1394 3fdc71d560dfdf1e371bd8ead04b8d80 85 Hamap MF_01103 UPF0291 protein . 1 59 16.562 T 26-04-2016 IPR009242 Protein of unknown function DUF896 smi_1618 2787777e2d9566032ac5f5e43a8183a0 424 PANTHER PTHR10572:SF13 4 424 1.4E-161 T 26-04-2016 smi_1618 2787777e2d9566032ac5f5e43a8183a0 424 Pfam PF00368 Hydroxymethylglutaryl-coenzyme A reductase 13 383 1.0E-109 T 26-04-2016 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|UniPathway: UPA00058 smi_1618 2787777e2d9566032ac5f5e43a8183a0 424 Gene3D G3DSA:3.30.70.420 115 215 1.5E-41 T 26-04-2016 IPR009023 Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding domain GO:0050662 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|UniPathway: UPA00058 smi_1618 2787777e2d9566032ac5f5e43a8183a0 424 PANTHER PTHR10572 4 424 1.4E-161 T 26-04-2016 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|UniPathway: UPA00058 smi_1618 2787777e2d9566032ac5f5e43a8183a0 424 Gene3D G3DSA:3.90.770.10 230 371 1.5E-89 T 26-04-2016 IPR023074 Hydroxymethylglutaryl-CoA reductase, class I/II, catalytic domain GO:0004420|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|UniPathway: UPA00058 smi_1618 2787777e2d9566032ac5f5e43a8183a0 424 Gene3D G3DSA:3.90.770.10 4 114 1.5E-89 T 26-04-2016 IPR023074 Hydroxymethylglutaryl-CoA reductase, class I/II, catalytic domain GO:0004420|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|UniPathway: UPA00058 smi_1618 2787777e2d9566032ac5f5e43a8183a0 424 SUPERFAMILY SSF55035 110 216 8.63E-34 T 26-04-2016 IPR009023 Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding domain GO:0050662 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|UniPathway: UPA00058 smi_1618 2787777e2d9566032ac5f5e43a8183a0 424 ProSitePatterns PS01192 Hydroxymethylglutaryl-coenzyme A reductases signature 3. 368 381 - T 26-04-2016 IPR023076 Hydroxymethylglutaryl-CoA reductase, class I/II, conserved site GO:0004420|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|UniPathway: UPA00058 smi_1618 2787777e2d9566032ac5f5e43a8183a0 424 TIGRFAM TIGR00532 HMG_CoA_R_NAD: hydroxymethylglutaryl-CoA reductase, degradative 6 382 1.0E-96 T 26-04-2016 IPR004553 Hydroxymethylglutaryl-CoA reductase, bacterial-type GO:0015936|GO:0016616|GO:0050662 smi_1618 2787777e2d9566032ac5f5e43a8183a0 424 SUPERFAMILY SSF56542 225 423 5.36E-101 T 26-04-2016 IPR009029 Hydroxymethylglutaryl-CoA reductase, class I/II, substrate-binding domain GO:0015936|GO:0016616|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|UniPathway: UPA00058 smi_1618 2787777e2d9566032ac5f5e43a8183a0 424 SUPERFAMILY SSF56542 5 117 5.36E-101 T 26-04-2016 IPR009029 Hydroxymethylglutaryl-CoA reductase, class I/II, substrate-binding domain GO:0015936|GO:0016616|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|UniPathway: UPA00058 smi_0871 6c0ff240c17861dbdb8ea89d81e0b4ec 283 Gene3D G3DSA:3.40.1190.20 4 280 3.5E-70 T 26-04-2016 IPR029056 Ribokinase-like smi_0871 6c0ff240c17861dbdb8ea89d81e0b4ec 283 ProSitePatterns PS01050 YjeF C-terminal domain signature 2. 215 225 - T 26-04-2016 IPR017953 Carbohydrate kinase, predicted, conserved site smi_0871 6c0ff240c17861dbdb8ea89d81e0b4ec 283 SUPERFAMILY SSF53613 3 277 3.05E-58 T 26-04-2016 IPR029056 Ribokinase-like smi_0871 6c0ff240c17861dbdb8ea89d81e0b4ec 283 PANTHER PTHR12592 8 282 1.1E-68 T 26-04-2016 smi_0871 6c0ff240c17861dbdb8ea89d81e0b4ec 283 Pfam PF01256 Carbohydrate kinase 29 272 8.5E-59 T 26-04-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 smi_0871 6c0ff240c17861dbdb8ea89d81e0b4ec 283 PANTHER PTHR12592:SF0 8 282 1.1E-68 T 26-04-2016 smi_0871 6c0ff240c17861dbdb8ea89d81e0b4ec 283 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 10 276 1.1E-50 T 26-04-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 smi_0871 6c0ff240c17861dbdb8ea89d81e0b4ec 283 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 5 280 23.675 T 26-04-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 smi_1269 470425c460287f33c18e3786fe893152 147 PANTHER PTHR19384:SF81 1 146 1.4E-56 T 26-04-2016 smi_1269 470425c460287f33c18e3786fe893152 147 ProSitePatterns PS00201 Flavodoxin signature. 6 22 - T 26-04-2016 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 smi_1269 470425c460287f33c18e3786fe893152 147 PRINTS PR00369 Flavodoxin signature 82 92 2.0E-5 T 26-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 smi_1269 470425c460287f33c18e3786fe893152 147 PRINTS PR00369 Flavodoxin signature 5 18 2.0E-5 T 26-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 smi_1269 470425c460287f33c18e3786fe893152 147 PRINTS PR00369 Flavodoxin signature 53 64 2.0E-5 T 26-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 smi_1269 470425c460287f33c18e3786fe893152 147 Pfam PF00258 Flavodoxin 6 134 2.2E-24 T 26-04-2016 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 smi_1269 470425c460287f33c18e3786fe893152 147 TIGRFAM TIGR01753 flav_short: flavodoxin 5 143 1.6E-44 T 26-04-2016 IPR010087 Flavodoxin, short chain GO:0010181 smi_1269 470425c460287f33c18e3786fe893152 147 Gene3D G3DSA:3.40.50.360 6 144 1.4E-41 T 26-04-2016 IPR029039 Flavoprotein-like domain smi_1269 470425c460287f33c18e3786fe893152 147 PANTHER PTHR19384 1 146 1.4E-56 T 26-04-2016 smi_1269 470425c460287f33c18e3786fe893152 147 SUPERFAMILY SSF52218 5 145 8.06E-40 T 26-04-2016 IPR029039 Flavoprotein-like domain smi_1380 5ba7b409a14c90f3d9749d9765b548e6 74 Pfam PF13268 Protein of unknown function (DUF4059) 1 72 8.8E-31 T 26-04-2016 IPR025134 Protein of unknown function DUF4059 smi_0154 d419dba522d43674a85e52c265759b1b 588 PANTHER PTHR24221:SF266 1 585 1.3E-279 T 26-04-2016 smi_0154 d419dba522d43674a85e52c265759b1b 588 SUPERFAMILY SSF52540 339 585 6.23E-86 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0154 d419dba522d43674a85e52c265759b1b 588 PANTHER PTHR24221 1 585 1.3E-279 T 26-04-2016 smi_0154 d419dba522d43674a85e52c265759b1b 588 SUPERFAMILY SSF90123 7 336 7.72E-59 T 26-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 smi_0154 d419dba522d43674a85e52c265759b1b 588 Gene3D G3DSA:3.40.50.300 349 575 3.8E-74 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0154 d419dba522d43674a85e52c265759b1b 588 Gene3D G3DSA:1.20.1560.10 7 336 7.4E-61 T 26-04-2016 smi_0154 d419dba522d43674a85e52c265759b1b 588 Pfam PF00005 ABC transporter 365 514 3.0E-32 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 smi_0154 d419dba522d43674a85e52c265759b1b 588 Pfam PF00664 ABC transporter transmembrane region 19 298 4.5E-40 T 26-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 smi_0154 d419dba522d43674a85e52c265759b1b 588 SMART SM00382 374 560 2.1E-13 T 26-04-2016 IPR003593 AAA+ ATPase domain smi_0148 bdb27319463b91b9db49b4f7eb9dd62e 338 Gene3D G3DSA:1.10.1040.10 187 329 2.5E-56 T 26-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 smi_0148 bdb27319463b91b9db49b4f7eb9dd62e 338 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 4 325 36.066 T 26-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 smi_0148 bdb27319463b91b9db49b4f7eb9dd62e 338 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 191 212 - T 26-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 smi_0148 bdb27319463b91b9db49b4f7eb9dd62e 338 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 183 323 6.7E-51 T 26-04-2016 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 smi_0148 bdb27319463b91b9db49b4f7eb9dd62e 338 SUPERFAMILY SSF48179 182 334 2.55E-53 T 26-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 smi_0148 bdb27319463b91b9db49b4f7eb9dd62e 338 PIRSF PIRSF000114 1 335 3.5E-102 T 26-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 smi_0148 bdb27319463b91b9db49b4f7eb9dd62e 338 SUPERFAMILY SSF51735 5 182 3.25E-57 T 26-04-2016 IPR016040 NAD(P)-binding domain smi_0148 bdb27319463b91b9db49b4f7eb9dd62e 338 Gene3D G3DSA:3.40.50.720 1 186 3.6E-61 T 26-04-2016 IPR016040 NAD(P)-binding domain smi_0148 bdb27319463b91b9db49b4f7eb9dd62e 338 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 58 85 7.5E-45 T 26-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 smi_0148 bdb27319463b91b9db49b4f7eb9dd62e 338 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 201 225 7.5E-45 T 26-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 smi_0148 bdb27319463b91b9db49b4f7eb9dd62e 338 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 241 258 7.5E-45 T 26-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 smi_0148 bdb27319463b91b9db49b4f7eb9dd62e 338 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 176 200 7.5E-45 T 26-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 smi_0148 bdb27319463b91b9db49b4f7eb9dd62e 338 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 8 25 7.5E-45 T 26-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 smi_0148 bdb27319463b91b9db49b4f7eb9dd62e 338 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 136 156 7.5E-45 T 26-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 smi_0148 bdb27319463b91b9db49b4f7eb9dd62e 338 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 6 163 2.3E-53 T 26-04-2016 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 smi_0148 bdb27319463b91b9db49b4f7eb9dd62e 338 PANTHER PTHR11728 1 337 8.1E-141 T 26-04-2016 smi_1570 5916ff294684e60374438347ccc38f5f 141 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 66 4.2E-30 T 26-04-2016 IPR020784 Ribosomal protein L11, N-terminal smi_1570 5916ff294684e60374438347ccc38f5f 141 SMART SM00649 9 140 8.6E-87 T 26-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 smi_1570 5916ff294684e60374438347ccc38f5f 141 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 73 9.0E-16 T 26-04-2016 smi_1570 5916ff294684e60374438347ccc38f5f 141 SUPERFAMILY SSF54747 1 84 1.44E-29 T 26-04-2016 IPR020784 Ribosomal protein L11, N-terminal smi_1570 5916ff294684e60374438347ccc38f5f 141 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 141 9.7E-64 T 26-04-2016 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 smi_1570 5916ff294684e60374438347ccc38f5f 141 ProSitePatterns PS00359 Ribosomal protein L11 signature. 126 141 - T 26-04-2016 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 smi_1570 5916ff294684e60374438347ccc38f5f 141 SUPERFAMILY SSF46906 67 139 6.15E-28 T 26-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 smi_1570 5916ff294684e60374438347ccc38f5f 141 Gene3D G3DSA:3.30.1550.10 2 71 5.1E-38 T 26-04-2016 IPR020784 Ribosomal protein L11, N-terminal smi_1570 5916ff294684e60374438347ccc38f5f 141 PANTHER PTHR11661 1 141 9.5E-75 T 26-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 smi_1570 5916ff294684e60374438347ccc38f5f 141 Pfam PF00298 Ribosomal protein L11, RNA binding domain 71 139 1.8E-26 T 26-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 smi_1570 5916ff294684e60374438347ccc38f5f 141 Gene3D G3DSA:1.10.10.250 72 140 5.2E-34 T 26-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 smi_1570 5916ff294684e60374438347ccc38f5f 141 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 141 31.322 T 26-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 smi_1004 d431f2a370bd4ed1581bb9a5c4ab1b74 335 SUPERFAMILY SSF53784 1 300 8.11E-109 T 26-04-2016 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 smi_1004 d431f2a370bd4ed1581bb9a5c4ab1b74 335 PANTHER PTHR13697:SF4 1 298 1.6E-134 T 26-04-2016 smi_1004 d431f2a370bd4ed1581bb9a5c4ab1b74 335 PIRSF PIRSF000532 1 321 2.6E-117 T 26-04-2016 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type GO:0005524|GO:0006002|GO:0006096|GO:0008443 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|UniPathway: UPA00109 smi_1004 d431f2a370bd4ed1581bb9a5c4ab1b74 335 PANTHER PTHR13697 1 298 1.6E-134 T 26-04-2016 smi_1004 d431f2a370bd4ed1581bb9a5c4ab1b74 335 Gene3D G3DSA:3.40.50.450 1 207 1.0E-74 T 26-04-2016 smi_1004 d431f2a370bd4ed1581bb9a5c4ab1b74 335 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 240 262 1.1E-86 T 26-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 smi_1004 d431f2a370bd4ed1581bb9a5c4ab1b74 335 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 6 25 1.1E-86 T 26-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 smi_1004 d431f2a370bd4ed1581bb9a5c4ab1b74 335 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 212 224 1.1E-86 T 26-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 smi_1004 d431f2a370bd4ed1581bb9a5c4ab1b74 335 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 176 193 1.1E-86 T 26-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 smi_1004 d431f2a370bd4ed1581bb9a5c4ab1b74 335 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 138 156 1.1E-86 T 26-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 smi_1004 d431f2a370bd4ed1581bb9a5c4ab1b74 335 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 120 137 1.1E-86 T 26-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 smi_1004 d431f2a370bd4ed1581bb9a5c4ab1b74 335 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 158 174 1.1E-86 T 26-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 smi_1004 d431f2a370bd4ed1581bb9a5c4ab1b74 335 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 93 109 1.1E-86 T 26-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 smi_1004 d431f2a370bd4ed1581bb9a5c4ab1b74 335 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 31 44 1.1E-86 T 26-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 smi_1004 d431f2a370bd4ed1581bb9a5c4ab1b74 335 Hamap MF_00339 ATP-dependent 6-phosphofructokinase [pfkA]. 1 335 47.408 T 26-04-2016 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|UniPathway: UPA00109 smi_1004 d431f2a370bd4ed1581bb9a5c4ab1b74 335 TIGRFAM TIGR02482 PFKA_ATP: 6-phosphofructokinase 3 298 8.6E-125 T 26-04-2016 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|UniPathway: UPA00109 smi_1004 d431f2a370bd4ed1581bb9a5c4ab1b74 335 Pfam PF00365 Phosphofructokinase 3 276 2.2E-106 T 26-04-2016 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 smi_1004 d431f2a370bd4ed1581bb9a5c4ab1b74 335 ProSitePatterns PS00433 Phosphofructokinase signature. 244 262 - T 26-04-2016 IPR015912 Phosphofructokinase, conserved site GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 smi_0811 9dc8b5dc92d6073dbfe7f022681727f0 117 PANTHER PTHR33360 2 117 1.3E-54 T 26-04-2016 smi_0811 9dc8b5dc92d6073dbfe7f022681727f0 117 PANTHER PTHR33360:SF2 2 117 1.3E-54 T 26-04-2016 smi_0811 9dc8b5dc92d6073dbfe7f022681727f0 117 SUPERFAMILY SSF143422 3 116 2.49E-43 T 26-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 smi_0811 9dc8b5dc92d6073dbfe7f022681727f0 117 SMART SM01321 1 116 2.8E-37 T 26-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 smi_0811 9dc8b5dc92d6073dbfe7f022681727f0 117 Pfam PF01797 Transposase IS200 like 3 116 6.1E-38 T 26-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 smi_0811 9dc8b5dc92d6073dbfe7f022681727f0 117 Gene3D G3DSA:3.30.70.1290 3 116 2.0E-51 T 26-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 smi_0353 1af154c721652bdbff9187b442369ba8 344 Gene3D G3DSA:3.30.450.40 175 333 1.7E-14 T 26-04-2016 IPR029016 GAF domain-like smi_0353 1af154c721652bdbff9187b442369ba8 344 Hamap MF_00081 Heat-inducible transcription repressor HrcA [hrcA]. 1 322 26.884 T 26-04-2016 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 smi_0353 1af154c721652bdbff9187b442369ba8 344 Gene3D G3DSA:1.10.10.10 1 81 1.0E-30 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain smi_0353 1af154c721652bdbff9187b442369ba8 344 PANTHER PTHR30363 1 306 7.4E-145 T 26-04-2016 smi_0353 1af154c721652bdbff9187b442369ba8 344 SUPERFAMILY SSF55781 69 332 6.67E-30 T 26-04-2016 IPR029016 GAF domain-like smi_0353 1af154c721652bdbff9187b442369ba8 344 Pfam PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding 2 57 4.4E-7 T 26-04-2016 IPR005104 Winged helix-turn-helix transcription repressor, HrcA DNA-binding domain GO:0003677|GO:0006355 smi_0353 1af154c721652bdbff9187b442369ba8 344 SUPERFAMILY SSF46785 1 80 4.24E-23 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain smi_0353 1af154c721652bdbff9187b442369ba8 344 Pfam PF01628 HrcA protein C terminal domain 102 315 1.4E-29 T 26-04-2016 IPR021153 Heat-inducible transcription repressor HrcA, C-terminal GO:0003677|GO:0006355 smi_0353 1af154c721652bdbff9187b442369ba8 344 PANTHER PTHR30363:SF17 1 306 7.4E-145 T 26-04-2016 smi_0353 1af154c721652bdbff9187b442369ba8 344 TIGRFAM TIGR00331 hrcA: heat-inducible transcription repressor HrcA 3 328 8.6E-94 T 26-04-2016 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 smi_0353 1af154c721652bdbff9187b442369ba8 344 PIRSF PIRSF005485 1 333 7.1E-76 T 26-04-2016 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 smi_0129 f647545c081560f685b026469e621732 328 Gene3D G3DSA:3.40.50.2300 55 177 2.3E-38 T 26-04-2016 smi_0129 f647545c081560f685b026469e621732 328 Gene3D G3DSA:1.10.260.40 3 54 1.4E-25 T 26-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 smi_0129 f647545c081560f685b026469e621732 328 PANTHER PTHR30146 1 327 9.5E-109 T 26-04-2016 smi_0129 f647545c081560f685b026469e621732 328 PANTHER PTHR30146:SF30 1 327 9.5E-109 T 26-04-2016 smi_0129 f647545c081560f685b026469e621732 328 Gene3D G3DSA:3.40.50.2300 178 308 4.7E-27 T 26-04-2016 smi_0129 f647545c081560f685b026469e621732 328 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 49 2.3E-22 T 26-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 smi_0129 f647545c081560f685b026469e621732 328 SMART SM00354 2 72 1.3E-36 T 26-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 smi_0129 f647545c081560f685b026469e621732 328 SUPERFAMILY SSF53822 62 314 9.85E-46 T 26-04-2016 IPR028082 Periplasmic binding protein-like I smi_0129 f647545c081560f685b026469e621732 328 SUPERFAMILY SSF47413 2 60 1.23E-18 T 26-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 smi_0129 f647545c081560f685b026469e621732 328 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 61 309 7.0E-19 T 26-04-2016 IPR001761 Periplasmic binding protein/LacI sugar binding domain smi_0129 f647545c081560f685b026469e621732 328 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 4 14 5.3E-5 T 26-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 smi_0129 f647545c081560f685b026469e621732 328 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 14 24 5.3E-5 T 26-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 smi_0129 f647545c081560f685b026469e621732 328 ProSitePatterns PS00356 LacI-type HTH domain signature. 5 23 - T 26-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 smi_1025 ea45f19c9a5c13108ead94be8e0c4559 298 SUPERFAMILY SSF74650 2 296 2.51E-43 T 26-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 smi_1025 ea45f19c9a5c13108ead94be8e0c4559 298 Pfam PF01263 Aldose 1-epimerase 2 273 6.4E-30 T 26-04-2016 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 smi_1025 ea45f19c9a5c13108ead94be8e0c4559 298 Gene3D G3DSA:2.70.98.10 2 253 5.8E-17 T 26-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 smi_1025 ea45f19c9a5c13108ead94be8e0c4559 298 PANTHER PTHR11122 201 297 3.4E-38 T 26-04-2016 smi_1025 ea45f19c9a5c13108ead94be8e0c4559 298 PANTHER PTHR11122 74 169 3.4E-38 T 26-04-2016 smi_1025 ea45f19c9a5c13108ead94be8e0c4559 298 PANTHER PTHR11122 1 58 3.4E-38 T 26-04-2016 smi_1025 ea45f19c9a5c13108ead94be8e0c4559 298 PANTHER PTHR11122:SF14 201 297 3.4E-38 T 26-04-2016 smi_1025 ea45f19c9a5c13108ead94be8e0c4559 298 PANTHER PTHR11122:SF14 74 169 3.4E-38 T 26-04-2016 smi_1025 ea45f19c9a5c13108ead94be8e0c4559 298 PANTHER PTHR11122:SF14 1 58 3.4E-38 T 26-04-2016 smi_1671 aa1512d94f9f46bdb0c41497be0a051f 139 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 8 138 2.6E-37 T 26-04-2016 IPR011605 NusB antitermination factor GO:0006353 smi_1671 aa1512d94f9f46bdb0c41497be0a051f 139 SUPERFAMILY SSF48013 8 135 5.1E-33 T 26-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 smi_1671 aa1512d94f9f46bdb0c41497be0a051f 139 Hamap MF_00073 N utilization substance protein B homolog [nusB]. 7 139 19.431 T 26-04-2016 IPR011605 NusB antitermination factor GO:0006353 smi_1671 aa1512d94f9f46bdb0c41497be0a051f 139 PANTHER PTHR11078 9 139 2.8E-44 T 26-04-2016 IPR011605 NusB antitermination factor GO:0006353 smi_1671 aa1512d94f9f46bdb0c41497be0a051f 139 Gene3D G3DSA:1.10.940.10 8 138 3.7E-39 T 26-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 smi_1671 aa1512d94f9f46bdb0c41497be0a051f 139 Pfam PF01029 NusB family 11 136 1.7E-31 T 26-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 smi_1119 d7341a0e80966b423e018e168e0f3b9e 452 PANTHER PTHR11061 2 452 7.8E-155 T 26-04-2016 smi_1119 d7341a0e80966b423e018e168e0f3b9e 452 SUPERFAMILY SSF53335 77 450 9.56E-72 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase smi_1119 d7341a0e80966b423e018e168e0f3b9e 452 Gene3D G3DSA:3.40.50.150 244 449 1.3E-62 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase smi_1119 d7341a0e80966b423e018e168e0f3b9e 452 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 15 443 3.3E-124 T 26-04-2016 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 smi_1119 d7341a0e80966b423e018e168e0f3b9e 452 PANTHER PTHR11061:SF30 2 452 7.8E-155 T 26-04-2016 smi_1119 d7341a0e80966b423e018e168e0f3b9e 452 Gene3D G3DSA:2.40.50.140 1 69 4.8E-23 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold smi_1119 d7341a0e80966b423e018e168e0f3b9e 452 SUPERFAMILY SSF50249 2 58 2.61E-15 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold smi_1119 d7341a0e80966b423e018e168e0f3b9e 452 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 90 450 3.2E-22 T 26-04-2016 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 smi_1119 d7341a0e80966b423e018e168e0f3b9e 452 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 433 443 - T 26-04-2016 IPR030391 RNA methyltransferase TrmA, conserved site smi_1119 d7341a0e80966b423e018e168e0f3b9e 452 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 381 412 - T 26-04-2016 IPR030390 RNA methyltransferase TrmA, active site smi_1763 a56c5f6f5120e31df516585174affc01 160 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 31 49 8.9E-34 T 26-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 smi_1763 a56c5f6f5120e31df516585174affc01 160 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 120 139 8.9E-34 T 26-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 smi_1763 a56c5f6f5120e31df516585174affc01 160 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 8 26 8.9E-34 T 26-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 smi_1763 a56c5f6f5120e31df516585174affc01 160 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 76 94 8.9E-34 T 26-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 smi_1763 a56c5f6f5120e31df516585174affc01 160 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 52 70 8.9E-34 T 26-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 smi_1763 a56c5f6f5120e31df516585174affc01 160 PANTHER PTHR35799 5 160 2.1E-96 T 26-04-2016 smi_1763 a56c5f6f5120e31df516585174affc01 160 SUPERFAMILY SSF63411 7 159 2.47E-61 T 26-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 smi_1763 a56c5f6f5120e31df516585174affc01 160 Hamap MF_00091 S-ribosylhomocysteine lyase [luxS]. 4 158 35.412 T 26-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 smi_1763 a56c5f6f5120e31df516585174affc01 160 Gene3D G3DSA:3.30.1360.80 7 159 1.8E-66 T 26-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 smi_1763 a56c5f6f5120e31df516585174affc01 160 PIRSF PIRSF006160 4 160 4.1E-64 T 26-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 smi_1763 a56c5f6f5120e31df516585174affc01 160 Pfam PF02664 S-Ribosylhomocysteinase (LuxS) 7 151 7.5E-54 T 26-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 smi_1763 a56c5f6f5120e31df516585174affc01 160 ProDom PD013172 LYASE SYNTHESIS LUXS AUTOINDUCER-2 PRODUCTION AUTOINDUCER S-RIBOSYLHOMOCYSTEINE AI-2 QUORUM SENSING 11 153 4.0E-80 T 26-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 smi_0978 ca4e43253f9b67b6ebf62ae4119a4ab6 286 TIGRFAM TIGR00477 tehB: tellurite resistance protein TehB 47 284 1.5E-111 T 26-04-2016 IPR004537 Tellurite resistance methyltransferase, TehB GO:0005737|GO:0008757|GO:0046690 smi_0978 ca4e43253f9b67b6ebf62ae4119a4ab6 286 SUPERFAMILY SSF51197 1 101 1.51E-35 T 26-04-2016 smi_0978 ca4e43253f9b67b6ebf62ae4119a4ab6 286 Pfam PF03848 Tellurite resistance protein TehB 90 281 1.9E-94 T 26-04-2016 IPR015985 Tellurite resistance methyltransferase TehB-like domain smi_0978 ca4e43253f9b67b6ebf62ae4119a4ab6 286 Pfam PF09313 Domain of unknown function (DUF1971) 8 88 1.4E-29 T 26-04-2016 IPR015392 Domain of unknown function DUF1971 smi_0978 ca4e43253f9b67b6ebf62ae4119a4ab6 286 Gene3D G3DSA:2.60.120.10 1 99 1.8E-47 T 26-04-2016 IPR014710 RmlC-like jelly roll fold smi_0978 ca4e43253f9b67b6ebf62ae4119a4ab6 286 Gene3D G3DSA:3.40.50.150 100 284 9.9E-32 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase smi_0978 ca4e43253f9b67b6ebf62ae4119a4ab6 286 SUPERFAMILY SSF53335 65 272 8.52E-30 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase smi_0978 ca4e43253f9b67b6ebf62ae4119a4ab6 286 PANTHER PTHR10108 5 271 4.0E-100 T 26-04-2016 smi_0978 ca4e43253f9b67b6ebf62ae4119a4ab6 286 PIRSF PIRSF005215 1 286 4.3E-149 T 26-04-2016 IPR014431 Tellurite resistance methyltransferase, TehB type-2 smi_0978 ca4e43253f9b67b6ebf62ae4119a4ab6 286 PANTHER PTHR10108:SF927 5 271 4.0E-100 T 26-04-2016 smi_0938 2728c60679eaca60cf6e0143a7e8ed7c 212 Hamap MF_00165 Thymidylate kinase [tmk]. 5 208 30.241 T 26-04-2016 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 smi_0938 2728c60679eaca60cf6e0143a7e8ed7c 212 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 1 198 2.4E-59 T 26-04-2016 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 smi_0938 2728c60679eaca60cf6e0143a7e8ed7c 212 PANTHER PTHR10344 1 208 1.9E-69 T 26-04-2016 smi_0938 2728c60679eaca60cf6e0143a7e8ed7c 212 Pfam PF02223 Thymidylate kinase 9 198 3.8E-52 T 26-04-2016 smi_0938 2728c60679eaca60cf6e0143a7e8ed7c 212 Gene3D G3DSA:3.40.50.300 3 208 1.3E-68 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0938 2728c60679eaca60cf6e0143a7e8ed7c 212 ProSitePatterns PS01331 Thymidylate kinase signature. 94 106 - T 26-04-2016 IPR018095 Thymidylate kinase, conserved site GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 smi_0938 2728c60679eaca60cf6e0143a7e8ed7c 212 SUPERFAMILY SSF52540 1 207 1.58E-54 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1630 378f401bd1088dace6a0fbed562bf984 534 Pfam PF00013 KH domain 228 281 2.6E-7 T 26-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 smi_1630 378f401bd1088dace6a0fbed562bf984 534 SUPERFAMILY SSF109604 330 481 3.37E-29 T 26-04-2016 smi_1630 378f401bd1088dace6a0fbed562bf984 534 SUPERFAMILY SSF54791 224 318 1.82E-16 T 26-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 smi_1630 378f401bd1088dace6a0fbed562bf984 534 TIGRFAM TIGR00277 HDIG: HDIG domain 346 423 6.3E-26 T 26-04-2016 IPR006675 HDIG domain smi_1630 378f401bd1088dace6a0fbed562bf984 534 Pfam PF12072 Domain of unknown function (DUF3552) 4 219 3.8E-44 T 26-04-2016 IPR022711 Ribonuclease Y, N-terminal smi_1630 378f401bd1088dace6a0fbed562bf984 534 Hamap MF_00335 Ribonuclease Y [rny]. 1 534 24.912 T 26-04-2016 IPR017705 Ribonuclease Y GO:0003723|GO:0006402|GO:0016020 smi_1630 378f401bd1088dace6a0fbed562bf984 534 SMART SM00471 346 452 1.2E-14 T 26-04-2016 IPR003607 HD/PDEase domain smi_1630 378f401bd1088dace6a0fbed562bf984 534 SMART SM00322 222 289 7.8E-8 T 26-04-2016 IPR004087 K Homology domain GO:0003676 smi_1630 378f401bd1088dace6a0fbed562bf984 534 Gene3D G3DSA:3.30.1370.10 234 313 2.7E-9 T 26-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 smi_1630 378f401bd1088dace6a0fbed562bf984 534 TIGRFAM TIGR03319 RNase_Y: ribonuclease Y 4 534 2.4E-234 T 26-04-2016 IPR017705 Ribonuclease Y GO:0003723|GO:0006402|GO:0016020 smi_1630 378f401bd1088dace6a0fbed562bf984 534 Pfam PF01966 HD domain 351 442 4.6E-18 T 26-04-2016 IPR006674 HD domain smi_1630 378f401bd1088dace6a0fbed562bf984 534 Gene3D G3DSA:1.10.3210.10 330 510 4.4E-43 T 26-04-2016 IPR006674 HD domain smi_1630 378f401bd1088dace6a0fbed562bf984 534 PANTHER PTHR12826 201 533 5.9E-140 T 26-04-2016 smi_1133 7e3e1c21f6ea56f9d80e68e33594846a 358 PANTHER PTHR10174:SF2 46 344 6.4E-73 T 26-04-2016 smi_1133 7e3e1c21f6ea56f9d80e68e33594846a 358 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 137 328 2.3E-53 T 26-04-2016 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 smi_1133 7e3e1c21f6ea56f9d80e68e33594846a 358 PANTHER PTHR10174 46 344 6.4E-73 T 26-04-2016 smi_1133 7e3e1c21f6ea56f9d80e68e33594846a 358 SUPERFAMILY SSF55347 127 329 1.25E-68 T 26-04-2016 smi_1133 7e3e1c21f6ea56f9d80e68e33594846a 358 Gene3D G3DSA:3.30.360.10 141 325 8.2E-75 T 26-04-2016 smi_1133 7e3e1c21f6ea56f9d80e68e33594846a 358 Gene3D G3DSA:3.40.50.720 2 140 5.8E-62 T 26-04-2016 IPR016040 NAD(P)-binding domain smi_1133 7e3e1c21f6ea56f9d80e68e33594846a 358 SUPERFAMILY SSF51735 3 155 9.01E-51 T 26-04-2016 IPR016040 NAD(P)-binding domain smi_1133 7e3e1c21f6ea56f9d80e68e33594846a 358 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 5 118 3.1E-32 T 26-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 smi_1133 7e3e1c21f6ea56f9d80e68e33594846a 358 TIGRFAM TIGR01296 asd_B: aspartate-semialdehyde dehydrogenase 5 342 5.0E-135 T 26-04-2016 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 smi_1133 7e3e1c21f6ea56f9d80e68e33594846a 358 SMART SM00859 4 119 6.2E-44 T 26-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 smi_1133 7e3e1c21f6ea56f9d80e68e33594846a 358 PIRSF PIRSF000148 2 347 1.6E-124 T 26-04-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 smi_1133 7e3e1c21f6ea56f9d80e68e33594846a 358 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 2 342 37.342 T 26-04-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 smi_1730 40b9071f7973aaa4ec51906da66e1e65 512 PANTHER PTHR19375 2 431 1.8E-143 T 26-04-2016 smi_1730 40b9071f7973aaa4ec51906da66e1e65 512 PANTHER PTHR19375:SF173 2 431 1.8E-143 T 26-04-2016 smi_1730 40b9071f7973aaa4ec51906da66e1e65 512 PRINTS PR00301 70kDa heat shock protein signature 32 44 2.0E-42 T 26-04-2016 IPR013126 Heat shock protein 70 family smi_1730 40b9071f7973aaa4ec51906da66e1e65 512 PRINTS PR00301 70kDa heat shock protein signature 179 189 2.0E-42 T 26-04-2016 IPR013126 Heat shock protein 70 family smi_1730 40b9071f7973aaa4ec51906da66e1e65 512 PRINTS PR00301 70kDa heat shock protein signature 336 356 2.0E-42 T 26-04-2016 IPR013126 Heat shock protein 70 family smi_1730 40b9071f7973aaa4ec51906da66e1e65 512 PRINTS PR00301 70kDa heat shock protein signature 120 140 2.0E-42 T 26-04-2016 IPR013126 Heat shock protein 70 family smi_1730 40b9071f7973aaa4ec51906da66e1e65 512 PRINTS PR00301 70kDa heat shock protein signature 58 66 2.0E-42 T 26-04-2016 IPR013126 Heat shock protein 70 family smi_1730 40b9071f7973aaa4ec51906da66e1e65 512 PRINTS PR00301 70kDa heat shock protein signature 305 321 2.0E-42 T 26-04-2016 IPR013126 Heat shock protein 70 family smi_1730 40b9071f7973aaa4ec51906da66e1e65 512 PRINTS PR00301 70kDa heat shock protein signature 3 16 2.0E-42 T 26-04-2016 IPR013126 Heat shock protein 70 family smi_1730 40b9071f7973aaa4ec51906da66e1e65 512 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 173 186 - T 26-04-2016 IPR018181 Heat shock protein 70, conserved site smi_1730 40b9071f7973aaa4ec51906da66e1e65 512 Pfam PF00012 Hsp70 protein 90 500 1.9E-104 T 26-04-2016 IPR013126 Heat shock protein 70 family smi_1730 40b9071f7973aaa4ec51906da66e1e65 512 Pfam PF00012 Hsp70 protein 4 79 7.3E-16 T 26-04-2016 IPR013126 Heat shock protein 70 family smi_1730 40b9071f7973aaa4ec51906da66e1e65 512 SUPERFAMILY SSF53067 1 164 8.95E-49 T 26-04-2016 smi_1730 40b9071f7973aaa4ec51906da66e1e65 512 Gene3D G3DSA:3.30.420.40 175 206 3.7E-29 T 26-04-2016 smi_1730 40b9071f7973aaa4ec51906da66e1e65 512 Gene3D G3DSA:3.30.420.40 290 331 3.7E-29 T 26-04-2016 smi_1730 40b9071f7973aaa4ec51906da66e1e65 512 Gene3D G3DSA:3.90.640.10 207 286 8.8E-12 T 26-04-2016 smi_1730 40b9071f7973aaa4ec51906da66e1e65 512 Gene3D G3DSA:3.30.420.40 4 174 5.3E-54 T 26-04-2016 smi_1730 40b9071f7973aaa4ec51906da66e1e65 512 SUPERFAMILY SSF53067 167 351 3.21E-52 T 26-04-2016 smi_1730 40b9071f7973aaa4ec51906da66e1e65 512 Gene3D G3DSA:2.60.34.10 342 507 3.2E-23 T 26-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain smi_1730 40b9071f7973aaa4ec51906da66e1e65 512 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 308 322 - T 26-04-2016 IPR018181 Heat shock protein 70, conserved site smi_1730 40b9071f7973aaa4ec51906da66e1e65 512 SUPERFAMILY SSF100920 378 488 1.96E-19 T 26-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain smi_1730 40b9071f7973aaa4ec51906da66e1e65 512 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 26-04-2016 IPR018181 Heat shock protein 70, conserved site smi_0565 aa08145903c35226c18b3d30cb4f3d01 598 Gene3D G3DSA:3.40.390.10 368 420 1.5E-6 T 26-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 smi_0565 aa08145903c35226c18b3d30cb4f3d01 598 PANTHER PTHR11804 13 589 6.1E-274 T 26-04-2016 smi_0565 aa08145903c35226c18b3d30cb4f3d01 598 Pfam PF08439 Oligopeptidase F 117 176 4.7E-5 T 26-04-2016 IPR013647 Oligopeptidase F, N-terminal domain smi_0565 aa08145903c35226c18b3d30cb4f3d01 598 SUPERFAMILY SSF55486 6 576 4.4E-86 T 26-04-2016 smi_0565 aa08145903c35226c18b3d30cb4f3d01 598 TIGRFAM TIGR00181 pepF: oligoendopeptidase F 6 590 1.9E-206 T 26-04-2016 IPR004438 Peptidase M3B, oligoendopeptidase F GO:0004222|GO:0006508 smi_0565 aa08145903c35226c18b3d30cb4f3d01 598 PANTHER PTHR11804:SF45 13 589 6.1E-274 T 26-04-2016 smi_0565 aa08145903c35226c18b3d30cb4f3d01 598 Pfam PF01432 Peptidase family M3 199 577 3.7E-36 T 26-04-2016 IPR001567 Peptidase M3A/M3B GO:0004222|GO:0006508 smi_2018 4c681c035ca6cf9c7fdf5a3d131081c5 694 PANTHER PTHR12143 8 693 2.9E-129 T 26-04-2016 smi_2018 4c681c035ca6cf9c7fdf5a3d131081c5 694 Gene3D G3DSA:1.20.1610.10 398 554 2.1E-59 T 26-04-2016 smi_2018 4c681c035ca6cf9c7fdf5a3d131081c5 694 Gene3D G3DSA:2.70.98.10 4 278 1.2E-50 T 26-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 smi_2018 4c681c035ca6cf9c7fdf5a3d131081c5 694 Gene3D G3DSA:3.30.2080.10 555 693 2.4E-44 T 26-04-2016 smi_2018 4c681c035ca6cf9c7fdf5a3d131081c5 694 PANTHER PTHR12143:SF22 8 693 2.9E-129 T 26-04-2016 smi_2018 4c681c035ca6cf9c7fdf5a3d131081c5 694 Gene3D G3DSA:1.20.1050.60 305 391 2.9E-23 T 26-04-2016 smi_2018 4c681c035ca6cf9c7fdf5a3d131081c5 694 Pfam PF07971 Glycosyl hydrolase family 92 208 689 2.6E-117 T 26-04-2016 IPR012939 Glycosyl hydrolase family 92 smi_2018 4c681c035ca6cf9c7fdf5a3d131081c5 694 TIGRFAM TIGR01180 aman2_put: putative alpha-1,2-mannosidase 180 690 1.5E-109 T 26-04-2016 IPR005887 Alpha-1,2-mannosidase, putative KEGG: 00130+3.2.1.-|KEGG: 00531+3.2.1.- smi_2018 4c681c035ca6cf9c7fdf5a3d131081c5 694 SUPERFAMILY SSF48208 227 671 5.37E-29 T 26-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 smi_0709 78d64282fd92bbdfbe11836d5dff81de 167 SUPERFAMILY SSF53335 6 139 8.67E-22 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase smi_0709 78d64282fd92bbdfbe11836d5dff81de 167 PANTHER PTHR35276:SF1 1 166 1.7E-58 T 26-04-2016 smi_0709 78d64282fd92bbdfbe11836d5dff81de 167 Gene3D G3DSA:3.40.50.150 13 144 4.0E-17 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase smi_0709 78d64282fd92bbdfbe11836d5dff81de 167 Pfam PF06962 Putative rRNA methylase 43 166 4.3E-46 T 26-04-2016 IPR010719 Putative rRNA methylase KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- smi_0709 78d64282fd92bbdfbe11836d5dff81de 167 PANTHER PTHR35276 1 166 1.7E-58 T 26-04-2016 smi_1529 6865388979e104726572cacbcc926ea8 398 SUPERFAMILY SSF103473 11 391 2.88E-36 T 26-04-2016 IPR020846 Major facilitator superfamily domain smi_1529 6865388979e104726572cacbcc926ea8 398 PANTHER PTHR23530:SF1 1 397 4.3E-31 T 26-04-2016 smi_1529 6865388979e104726572cacbcc926ea8 398 Pfam PF07690 Major Facilitator Superfamily 16 350 4.7E-21 T 26-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 smi_1529 6865388979e104726572cacbcc926ea8 398 PANTHER PTHR23530 1 397 4.3E-31 T 26-04-2016 smi_1529 6865388979e104726572cacbcc926ea8 398 Gene3D G3DSA:1.20.1250.20 219 384 1.7E-10 T 26-04-2016 smi_1529 6865388979e104726572cacbcc926ea8 398 Gene3D G3DSA:1.20.1250.20 12 194 1.0E-17 T 26-04-2016 smi_0951 59567b71006b59f9480bfcdbdbd18ef1 284 SUPERFAMILY SSF50249 148 218 5.83E-5 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold smi_0951 59567b71006b59f9480bfcdbdbd18ef1 284 PIRSF PIRSF012524 1 284 2.6E-117 T 26-04-2016 IPR014464 Conserved virulence factor B smi_0951 59567b71006b59f9480bfcdbdbd18ef1 284 PANTHER PTHR37296 2 284 1.9E-118 T 26-04-2016 smi_0951 59567b71006b59f9480bfcdbdbd18ef1 284 Pfam PF13509 S1 domain 13 61 2.8E-10 T 26-04-2016 smi_1556 fc7dd5b40460f76af6a00e4950c4275b 296 PIRSF PIRSF005052 6 291 2.5E-108 T 26-04-2016 IPR005337 RapZ-like family GO:0005524 smi_1556 fc7dd5b40460f76af6a00e4950c4275b 296 PANTHER PTHR30448:SF0 1 295 2.6E-152 T 26-04-2016 smi_1556 fc7dd5b40460f76af6a00e4950c4275b 296 PANTHER PTHR30448 1 295 2.6E-152 T 26-04-2016 smi_1556 fc7dd5b40460f76af6a00e4950c4275b 296 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 6 288 42.033 T 26-04-2016 IPR005337 RapZ-like family GO:0005524 smi_1556 fc7dd5b40460f76af6a00e4950c4275b 296 Pfam PF03668 P-loop ATPase protein family 7 288 1.1E-103 T 26-04-2016 IPR005337 RapZ-like family GO:0005524 smi_1556 fc7dd5b40460f76af6a00e4950c4275b 296 SUPERFAMILY SSF52540 4 160 5.44E-12 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1556 fc7dd5b40460f76af6a00e4950c4275b 296 Gene3D G3DSA:3.40.50.300 3 162 9.7E-19 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1523 bae65a4af9afffa6c1221895a11d993a 96 SUPERFAMILY SSF54995 1 95 3.01E-31 T 26-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 smi_1523 bae65a4af9afffa6c1221895a11d993a 96 Gene3D G3DSA:3.30.70.60 1 95 1.6E-33 T 26-04-2016 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 smi_1523 bae65a4af9afffa6c1221895a11d993a 96 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 96 21.58 T 26-04-2016 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 smi_1523 bae65a4af9afffa6c1221895a11d993a 96 PANTHER PTHR21011 1 95 1.0E-25 T 26-04-2016 smi_1523 bae65a4af9afffa6c1221895a11d993a 96 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 95 2.9E-26 T 26-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 smi_1523 bae65a4af9afffa6c1221895a11d993a 96 Pfam PF01250 Ribosomal protein S6 3 93 4.0E-27 T 26-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 smi_0773 5ecfdd75d6a0b1d6e6d66006118af368 428 Gene3D G3DSA:3.30.360.10 150 300 1.8E-56 T 26-04-2016 smi_0773 5ecfdd75d6a0b1d6e6d66006118af368 428 SUPERFAMILY SSF55021 349 415 2.84E-6 T 26-04-2016 smi_0773 5ecfdd75d6a0b1d6e6d66006118af368 428 SUPERFAMILY SSF55347 138 303 1.57E-52 T 26-04-2016 smi_0773 5ecfdd75d6a0b1d6e6d66006118af368 428 Pfam PF00742 Homoserine dehydrogenase 138 316 2.0E-62 T 26-04-2016 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 smi_0773 5ecfdd75d6a0b1d6e6d66006118af368 428 PANTHER PTHR21499 1 370 8.4E-135 T 26-04-2016 smi_0773 5ecfdd75d6a0b1d6e6d66006118af368 428 PIRSF PIRSF000098 1 428 4.4E-166 T 26-04-2016 IPR016204 Homoserine dehydrogenase GO:0004412|GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 smi_0773 5ecfdd75d6a0b1d6e6d66006118af368 428 SUPERFAMILY SSF51735 2 159 5.17E-34 T 26-04-2016 IPR016040 NAD(P)-binding domain smi_0773 5ecfdd75d6a0b1d6e6d66006118af368 428 Gene3D G3DSA:3.40.50.720 2 149 6.5E-47 T 26-04-2016 IPR016040 NAD(P)-binding domain smi_0773 5ecfdd75d6a0b1d6e6d66006118af368 428 PANTHER PTHR21499:SF2 1 370 8.4E-135 T 26-04-2016 smi_0773 5ecfdd75d6a0b1d6e6d66006118af368 428 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 9 130 3.2E-18 T 26-04-2016 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 smi_0773 5ecfdd75d6a0b1d6e6d66006118af368 428 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 184 206 - T 26-04-2016 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 smi_0842 55b721c26372fe4edec6f9b26a801b12 665 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 535 664 5.6E-37 T 26-04-2016 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 smi_0842 55b721c26372fe4edec6f9b26a801b12 665 Gene3D G3DSA:2.170.220.10 117 235 1.0E-46 T 26-04-2016 smi_0842 55b721c26372fe4edec6f9b26a801b12 665 Gene3D G3DSA:3.40.50.620 236 346 2.3E-74 T 26-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold smi_0842 55b721c26372fe4edec6f9b26a801b12 665 Gene3D G3DSA:3.40.50.620 3 114 2.3E-74 T 26-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold smi_0842 55b721c26372fe4edec6f9b26a801b12 665 SUPERFAMILY SSF50249 561 662 1.0E-26 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold smi_0842 55b721c26372fe4edec6f9b26a801b12 665 Gene3D G3DSA:2.40.50.140 555 664 2.0E-38 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold smi_0842 55b721c26372fe4edec6f9b26a801b12 665 Hamap MF_01228 Methionine--tRNA ligase [metG]. 1 519 49.487 T 26-04-2016 IPR023457 Methionine-tRNA synthetase, type 2 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 smi_0842 55b721c26372fe4edec6f9b26a801b12 665 SUPERFAMILY SSF47323 362 575 1.21E-43 T 26-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 smi_0842 55b721c26372fe4edec6f9b26a801b12 665 SUPERFAMILY SSF52374 3 363 3.22E-104 T 26-04-2016 smi_0842 55b721c26372fe4edec6f9b26a801b12 665 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 6 492 2.2E-168 T 26-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 smi_0842 55b721c26372fe4edec6f9b26a801b12 665 PANTHER PTHR11946:SF1 2 620 0.0 T 26-04-2016 smi_0842 55b721c26372fe4edec6f9b26a801b12 665 Pfam PF01588 Putative tRNA binding domain 568 662 4.6E-22 T 26-04-2016 IPR002547 tRNA-binding domain GO:0000049 Reactome: REACT_71 smi_0842 55b721c26372fe4edec6f9b26a801b12 665 PANTHER PTHR11946 2 620 0.0 T 26-04-2016 smi_0842 55b721c26372fe4edec6f9b26a801b12 665 PRINTS PR01041 Methionyl-tRNA synthetase signature 88 99 1.9E-34 T 26-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 smi_0842 55b721c26372fe4edec6f9b26a801b12 665 PRINTS PR01041 Methionyl-tRNA synthetase signature 360 371 1.9E-34 T 26-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 smi_0842 55b721c26372fe4edec6f9b26a801b12 665 PRINTS PR01041 Methionyl-tRNA synthetase signature 234 245 1.9E-34 T 26-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 smi_0842 55b721c26372fe4edec6f9b26a801b12 665 PRINTS PR01041 Methionyl-tRNA synthetase signature 268 283 1.9E-34 T 26-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 smi_0842 55b721c26372fe4edec6f9b26a801b12 665 PRINTS PR01041 Methionyl-tRNA synthetase signature 40 54 1.9E-34 T 26-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 smi_0842 55b721c26372fe4edec6f9b26a801b12 665 PRINTS PR01041 Methionyl-tRNA synthetase signature 8 21 1.9E-34 T 26-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 smi_0842 55b721c26372fe4edec6f9b26a801b12 665 Gene3D G3DSA:1.10.730.10 349 520 7.6E-53 T 26-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 smi_0842 55b721c26372fe4edec6f9b26a801b12 665 Pfam PF09334 tRNA synthetases class I (M) 6 372 4.0E-112 T 26-04-2016 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 smi_0269 7c0188a1edc937230b739fdbcbeccd5c 438 Pfam PF01610 Transposase 165 418 1.4E-58 T 26-04-2016 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain smi_0269 7c0188a1edc937230b739fdbcbeccd5c 438 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 43 92 4.1E-9 T 26-04-2016 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger smi_0269 7c0188a1edc937230b739fdbcbeccd5c 438 PANTHER PTHR33498:SF1 3 432 3.6E-70 T 26-04-2016 smi_0269 7c0188a1edc937230b739fdbcbeccd5c 438 PANTHER PTHR33498 3 432 3.6E-70 T 26-04-2016 smi_0488 371a4a8206c1b445dce7c05d2f748b2e 440 SUPERFAMILY SSF50249 1 50 5.71E-9 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold smi_0488 371a4a8206c1b445dce7c05d2f748b2e 440 PANTHER PTHR11061:SF35 1 439 3.6E-298 T 26-04-2016 smi_0488 371a4a8206c1b445dce7c05d2f748b2e 440 Gene3D G3DSA:3.40.50.150 230 432 3.0E-60 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase smi_0488 371a4a8206c1b445dce7c05d2f748b2e 440 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 366 397 - T 26-04-2016 IPR030390 RNA methyltransferase TrmA, active site smi_0488 371a4a8206c1b445dce7c05d2f748b2e 440 SUPERFAMILY SSF53335 53 434 2.94E-74 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase smi_0488 371a4a8206c1b445dce7c05d2f748b2e 440 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 74 434 5.6E-20 T 26-04-2016 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 smi_0488 371a4a8206c1b445dce7c05d2f748b2e 440 Pfam PF01938 TRAM domain 4 44 1.6E-4 T 26-04-2016 IPR002792 TRAM domain smi_0488 371a4a8206c1b445dce7c05d2f748b2e 440 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 2 427 3.0E-132 T 26-04-2016 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 smi_0488 371a4a8206c1b445dce7c05d2f748b2e 440 Gene3D G3DSA:2.40.50.140 1 64 3.4E-19 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold smi_0488 371a4a8206c1b445dce7c05d2f748b2e 440 PANTHER PTHR11061 1 439 3.6E-298 T 26-04-2016 smi_0488 371a4a8206c1b445dce7c05d2f748b2e 440 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 417 427 - T 26-04-2016 IPR030391 RNA methyltransferase TrmA, conserved site smi_0623 c8343358b81ef8526418780579b94fd6 177 Pfam PF04472 Protein of unknown function (DUF552) 82 150 6.0E-15 T 26-04-2016 IPR007561 Cell division protein SepF/SepF-related GO:0000917 smi_0623 c8343358b81ef8526418780579b94fd6 177 PANTHER PTHR35798 1 175 4.3E-31 T 26-04-2016 smi_0623 c8343358b81ef8526418780579b94fd6 177 PANTHER PTHR35798:SF1 1 175 4.3E-31 T 26-04-2016 smi_0623 c8343358b81ef8526418780579b94fd6 177 Hamap MF_01197 Cell division protein SepF [sepF]. 4 159 17.088 T 26-04-2016 IPR023052 Cell division protein SepF GO:0090529 smi_0138 2c7a5615e090fc2945385e13b075decf 686 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 384 390 - T 26-04-2016 IPR018303 P-type ATPase, phosphorylation site smi_0138 2c7a5615e090fc2945385e13b075decf 686 Gene3D G3DSA:3.40.50.1000 506 627 3.9E-31 T 26-04-2016 IPR023214 HAD-like domain smi_0138 2c7a5615e090fc2945385e13b075decf 686 Gene3D G3DSA:3.40.50.1000 358 396 3.9E-31 T 26-04-2016 IPR023214 HAD-like domain smi_0138 2c7a5615e090fc2945385e13b075decf 686 Gene3D G3DSA:3.40.1110.10 397 505 3.2E-8 T 26-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 smi_0138 2c7a5615e090fc2945385e13b075decf 686 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 140 683 2.0E-157 T 26-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 smi_0138 2c7a5615e090fc2945385e13b075decf 686 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 161 669 3.7E-77 T 26-04-2016 IPR001757 P-type ATPase GO:0016021 smi_0138 2c7a5615e090fc2945385e13b075decf 686 Pfam PF00702 haloacid dehalogenase-like hydrolase 378 592 8.2E-30 T 26-04-2016 smi_0138 2c7a5615e090fc2945385e13b075decf 686 SUPERFAMILY SSF81653 196 290 2.48E-19 T 26-04-2016 smi_0138 2c7a5615e090fc2945385e13b075decf 686 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 507 518 7.6E-22 T 26-04-2016 smi_0138 2c7a5615e090fc2945385e13b075decf 686 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 240 254 7.6E-22 T 26-04-2016 smi_0138 2c7a5615e090fc2945385e13b075decf 686 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 529 539 7.6E-22 T 26-04-2016 smi_0138 2c7a5615e090fc2945385e13b075decf 686 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 605 617 7.6E-22 T 26-04-2016 smi_0138 2c7a5615e090fc2945385e13b075decf 686 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 582 601 7.6E-22 T 26-04-2016 smi_0138 2c7a5615e090fc2945385e13b075decf 686 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 382 396 7.6E-22 T 26-04-2016 smi_0138 2c7a5615e090fc2945385e13b075decf 686 SUPERFAMILY SSF56784 440 681 1.06E-35 T 26-04-2016 IPR023214 HAD-like domain smi_0138 2c7a5615e090fc2945385e13b075decf 686 SUPERFAMILY SSF56784 381 400 1.06E-35 T 26-04-2016 IPR023214 HAD-like domain smi_0138 2c7a5615e090fc2945385e13b075decf 686 Pfam PF00122 E1-E2 ATPase 163 373 2.0E-38 T 26-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 smi_0138 2c7a5615e090fc2945385e13b075decf 686 Gene3D G3DSA:2.70.150.10 173 290 1.0E-19 T 26-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 smi_0138 2c7a5615e090fc2945385e13b075decf 686 PANTHER PTHR24093 150 653 5.9E-86 T 26-04-2016 smi_0138 2c7a5615e090fc2945385e13b075decf 686 PANTHER PTHR24093:SF126 150 653 5.9E-86 T 26-04-2016 smi_0573 e57f17d1887aea857b2811f1bef33cbc 104 Gene3D G3DSA:3.40.30.10 3 103 2.4E-33 T 26-04-2016 IPR012336 Thioredoxin-like fold smi_0573 e57f17d1887aea857b2811f1bef33cbc 104 TIGRFAM TIGR01068 thioredoxin: thioredoxin 6 102 2.8E-34 T 26-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 smi_0573 e57f17d1887aea857b2811f1bef33cbc 104 PIRSF PIRSF000077 1 104 1.6E-37 T 26-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 smi_0573 e57f17d1887aea857b2811f1bef33cbc 104 PRINTS PR00421 Thioredoxin family signature 19 27 4.3E-7 T 26-04-2016 smi_0573 e57f17d1887aea857b2811f1bef33cbc 104 PRINTS PR00421 Thioredoxin family signature 68 79 4.3E-7 T 26-04-2016 smi_0573 e57f17d1887aea857b2811f1bef33cbc 104 PRINTS PR00421 Thioredoxin family signature 27 36 4.3E-7 T 26-04-2016 smi_0573 e57f17d1887aea857b2811f1bef33cbc 104 PANTHER PTHR10438 1 103 2.3E-33 T 26-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 smi_0573 e57f17d1887aea857b2811f1bef33cbc 104 Pfam PF00085 Thioredoxin 4 101 1.9E-28 T 26-04-2016 IPR013766 Thioredoxin domain GO:0045454 smi_0573 e57f17d1887aea857b2811f1bef33cbc 104 ProSitePatterns PS00194 Thioredoxin family active site. 20 38 - T 26-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 smi_0573 e57f17d1887aea857b2811f1bef33cbc 104 SUPERFAMILY SSF52833 3 102 1.69E-33 T 26-04-2016 IPR012336 Thioredoxin-like fold smi_1999 88c57bf2139c9b046046e032d7f3e1f1 426 Pfam PF06824 Protein of unknown function (DUF1237) 23 420 9.7E-146 T 26-04-2016 IPR008313 Meiotically up-regulated gene 157 protein smi_1999 88c57bf2139c9b046046e032d7f3e1f1 426 Gene3D G3DSA:1.50.10.10 6 424 2.0E-173 T 26-04-2016 IPR012341 Six-hairpin glycosidase GO:0003824 smi_1999 88c57bf2139c9b046046e032d7f3e1f1 426 PANTHER PTHR31047 6 426 1.3E-202 T 26-04-2016 smi_1999 88c57bf2139c9b046046e032d7f3e1f1 426 PIRSF PIRSF028846 1 426 3.8E-204 T 26-04-2016 IPR008313 Meiotically up-regulated gene 157 protein smi_1999 88c57bf2139c9b046046e032d7f3e1f1 426 SMART SM01149 22 421 2.1E-260 T 26-04-2016 IPR008313 Meiotically up-regulated gene 157 protein smi_1999 88c57bf2139c9b046046e032d7f3e1f1 426 SUPERFAMILY SSF48208 4 425 2.04E-168 T 26-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 smi_1275 856debbb6c97a54d8203628def511776 243 PANTHER PTHR30371:SF4 1 237 5.2E-73 T 26-04-2016 smi_1275 856debbb6c97a54d8203628def511776 243 Pfam PF00902 Sec-independent protein translocase protein (TatC) 10 214 4.5E-52 T 26-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 smi_1275 856debbb6c97a54d8203628def511776 243 PANTHER PTHR30371 1 237 5.2E-73 T 26-04-2016 smi_1275 856debbb6c97a54d8203628def511776 243 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 8 219 1.1E-53 T 26-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 smi_1275 856debbb6c97a54d8203628def511776 243 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 1 234 16.088 T 26-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 smi_1275 856debbb6c97a54d8203628def511776 243 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 78 96 9.0E-32 T 26-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 smi_1275 856debbb6c97a54d8203628def511776 243 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 96 122 9.0E-32 T 26-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 smi_1275 856debbb6c97a54d8203628def511776 243 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 147 175 9.0E-32 T 26-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 smi_1275 856debbb6c97a54d8203628def511776 243 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 7 34 9.0E-32 T 26-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 smi_0566 bdc9c45dfcdc5be6e605938e6de310bd 263 PANTHER PTHR41292:SF1 19 263 1.2E-68 T 26-04-2016 smi_0566 bdc9c45dfcdc5be6e605938e6de310bd 263 Pfam PF10978 Protein of unknown function (DUF2785) 81 242 7.7E-41 T 26-04-2016 IPR021247 Protein of unknown function DUF2785 smi_0566 bdc9c45dfcdc5be6e605938e6de310bd 263 PANTHER PTHR41292 19 263 1.2E-68 T 26-04-2016 smi_1825 12718b97050ea89f37fb21218bae2f63 566 SUPERFAMILY SSF52467 193 358 7.27E-58 T 26-04-2016 IPR029035 DHS-like NAD/FAD-binding domain smi_1825 12718b97050ea89f37fb21218bae2f63 566 PANTHER PTHR18968 1 566 0.0 T 26-04-2016 smi_1825 12718b97050ea89f37fb21218bae2f63 566 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 11 177 3.6E-56 T 26-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 smi_1825 12718b97050ea89f37fb21218bae2f63 566 Gene3D G3DSA:3.40.50.970 10 186 4.7E-72 T 26-04-2016 IPR029061 Thiamin diphosphate-binding fold smi_1825 12718b97050ea89f37fb21218bae2f63 566 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 391 538 1.6E-45 T 26-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 smi_1825 12718b97050ea89f37fb21218bae2f63 566 SUPERFAMILY SSF52518 8 190 3.53E-61 T 26-04-2016 IPR029061 Thiamin diphosphate-binding fold smi_1825 12718b97050ea89f37fb21218bae2f63 566 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 428 447 - T 26-04-2016 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 smi_1825 12718b97050ea89f37fb21218bae2f63 566 PANTHER PTHR18968:SF116 1 566 0.0 T 26-04-2016 smi_1825 12718b97050ea89f37fb21218bae2f63 566 SUPERFAMILY SSF52518 370 561 4.05E-63 T 26-04-2016 IPR029061 Thiamin diphosphate-binding fold smi_1825 12718b97050ea89f37fb21218bae2f63 566 Gene3D G3DSA:3.40.50.1220 195 358 9.7E-62 T 26-04-2016 IPR029035 DHS-like NAD/FAD-binding domain smi_1825 12718b97050ea89f37fb21218bae2f63 566 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 11 562 4.9E-236 T 26-04-2016 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 smi_1825 12718b97050ea89f37fb21218bae2f63 566 Gene3D G3DSA:3.40.50.970 362 560 1.0E-70 T 26-04-2016 IPR029061 Thiamin diphosphate-binding fold smi_1825 12718b97050ea89f37fb21218bae2f63 566 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 200 335 9.2E-47 T 26-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 smi_1510 6c36334b3965633e0ef62c3a5ddaaa0b 652 Gene3D G3DSA:3.90.76.10 42 222 8.5E-40 T 26-04-2016 smi_1510 6c36334b3965633e0ef62c3a5ddaaa0b 652 SUPERFAMILY SSF53850 26 583 8.14E-76 T 26-04-2016 smi_1510 6c36334b3965633e0ef62c3a5ddaaa0b 652 PANTHER PTHR30290 330 388 1.5E-133 T 26-04-2016 smi_1510 6c36334b3965633e0ef62c3a5ddaaa0b 652 PANTHER PTHR30290 1 311 1.5E-133 T 26-04-2016 smi_1510 6c36334b3965633e0ef62c3a5ddaaa0b 652 PANTHER PTHR30290 404 579 1.5E-133 T 26-04-2016 smi_1510 6c36334b3965633e0ef62c3a5ddaaa0b 652 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 76 519 6.5E-50 T 26-04-2016 IPR000914 Solute-binding protein family 5 domain smi_1510 6c36334b3965633e0ef62c3a5ddaaa0b 652 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 81 103 - T 26-04-2016 IPR023765 Solute-binding protein family 5, conserved site smi_1510 6c36334b3965633e0ef62c3a5ddaaa0b 652 Gene3D G3DSA:3.10.105.10 302 579 5.4E-27 T 26-04-2016 smi_1510 6c36334b3965633e0ef62c3a5ddaaa0b 652 PANTHER PTHR30290:SF10 330 388 1.5E-133 T 26-04-2016 smi_1510 6c36334b3965633e0ef62c3a5ddaaa0b 652 PANTHER PTHR30290:SF10 1 311 1.5E-133 T 26-04-2016 smi_1510 6c36334b3965633e0ef62c3a5ddaaa0b 652 PANTHER PTHR30290:SF10 404 579 1.5E-133 T 26-04-2016 smi_0322 55828eb4c28c03cb55dc2749714042ce 659 PANTHER PTHR30290:SF10 407 634 1.4E-131 T 26-04-2016 smi_0322 55828eb4c28c03cb55dc2749714042ce 659 PANTHER PTHR30290:SF10 1 314 1.4E-131 T 26-04-2016 smi_0322 55828eb4c28c03cb55dc2749714042ce 659 PANTHER PTHR30290:SF10 333 391 1.4E-131 T 26-04-2016 smi_0322 55828eb4c28c03cb55dc2749714042ce 659 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 78 523 4.3E-44 T 26-04-2016 IPR000914 Solute-binding protein family 5 domain smi_0322 55828eb4c28c03cb55dc2749714042ce 659 Gene3D G3DSA:3.40.190.10 213 342 6.8E-13 T 26-04-2016 smi_0322 55828eb4c28c03cb55dc2749714042ce 659 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 83 105 - T 26-04-2016 IPR023765 Solute-binding protein family 5, conserved site smi_0322 55828eb4c28c03cb55dc2749714042ce 659 PIRSF PIRSF002741 1 618 1.9E-45 T 26-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 smi_0322 55828eb4c28c03cb55dc2749714042ce 659 PANTHER PTHR30290 407 634 1.4E-131 T 26-04-2016 smi_0322 55828eb4c28c03cb55dc2749714042ce 659 PANTHER PTHR30290 1 314 1.4E-131 T 26-04-2016 smi_0322 55828eb4c28c03cb55dc2749714042ce 659 PANTHER PTHR30290 333 391 1.4E-131 T 26-04-2016 smi_0322 55828eb4c28c03cb55dc2749714042ce 659 SUPERFAMILY SSF53850 38 593 9.41E-76 T 26-04-2016 smi_0322 55828eb4c28c03cb55dc2749714042ce 659 Gene3D G3DSA:3.90.76.10 44 212 3.9E-38 T 26-04-2016 smi_0322 55828eb4c28c03cb55dc2749714042ce 659 Gene3D G3DSA:3.10.105.10 343 585 9.9E-34 T 26-04-2016 smi_0874 90c10528ad88644ab5bdb8379310d74f 403 SUPERFAMILY SSF143856 108 226 1.96E-46 T 26-04-2016 IPR024052 Phosphopentomutase DeoB cap domain GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180|UniPathway: UPA00087 smi_0874 90c10528ad88644ab5bdb8379310d74f 403 PIRSF PIRSF001491 3 403 3.7E-148 T 26-04-2016 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180|UniPathway: UPA00087 smi_0874 90c10528ad88644ab5bdb8379310d74f 403 Gene3D G3DSA:3.40.720.10 230 401 1.0E-70 T 26-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 smi_0874 90c10528ad88644ab5bdb8379310d74f 403 Gene3D G3DSA:3.40.720.10 2 107 1.0E-70 T 26-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 smi_0874 90c10528ad88644ab5bdb8379310d74f 403 Hamap MF_00740 Phosphopentomutase [deoB]. 4 399 53.595 T 26-04-2016 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180|UniPathway: UPA00087 smi_0874 90c10528ad88644ab5bdb8379310d74f 403 SUPERFAMILY SSF53649 3 108 2.62E-80 T 26-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 smi_0874 90c10528ad88644ab5bdb8379310d74f 403 SUPERFAMILY SSF53649 227 402 2.62E-80 T 26-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 smi_0874 90c10528ad88644ab5bdb8379310d74f 403 TIGRFAM TIGR01696 deoB: phosphopentomutase 6 396 4.0E-154 T 26-04-2016 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180|UniPathway: UPA00087 smi_0874 90c10528ad88644ab5bdb8379310d74f 403 Pfam PF01676 Metalloenzyme superfamily 6 390 9.5E-38 T 26-04-2016 IPR006124 Metalloenzyme GO:0003824|GO:0046872 smi_0874 90c10528ad88644ab5bdb8379310d74f 403 PANTHER PTHR21110:SF0 5 403 4.6E-147 T 26-04-2016 smi_0874 90c10528ad88644ab5bdb8379310d74f 403 PANTHER PTHR21110 5 403 4.6E-147 T 26-04-2016 smi_0874 90c10528ad88644ab5bdb8379310d74f 403 Gene3D G3DSA:3.30.70.1250 108 226 4.8E-51 T 26-04-2016 IPR024052 Phosphopentomutase DeoB cap domain GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180|UniPathway: UPA00087 smi_1713 15d86edac8197418c4465d5b2643d7c9 523 SUPERFAMILY SSF53041 29 178 1.44E-37 T 26-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 smi_1713 15d86edac8197418c4465d5b2643d7c9 523 PANTHER PTHR30461:SF3 9 500 1.4E-51 T 26-04-2016 smi_1713 15d86edac8197418c4465d5b2643d7c9 523 SMART SM00857 30 179 2.0E-51 T 26-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 smi_1713 15d86edac8197418c4465d5b2643d7c9 523 Pfam PF07508 Recombinase 201 306 2.1E-24 T 26-04-2016 IPR011109 DNA-binding recombinase domain GO:0000150|GO:0003677 smi_1713 15d86edac8197418c4465d5b2643d7c9 523 Pfam PF13408 Recombinase zinc beta ribbon domain 329 388 1.1E-10 T 26-04-2016 IPR025827 Recombinase zinc beta ribbon domain smi_1713 15d86edac8197418c4465d5b2643d7c9 523 Pfam PF00239 Resolvase, N terminal domain 30 178 8.5E-35 T 26-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 smi_1713 15d86edac8197418c4465d5b2643d7c9 523 PANTHER PTHR30461 9 500 1.4E-51 T 26-04-2016 smi_1713 15d86edac8197418c4465d5b2643d7c9 523 Gene3D G3DSA:3.40.50.1390 29 160 1.7E-34 T 26-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 smi_1048 60f798fe2bc3788af48d4a6a001c94ad 169 Pfam PF08020 Protein of unknown function (DUF1706) 3 165 1.3E-54 T 26-04-2016 IPR012550 Protein of unknown function DUF1706 smi_1048 60f798fe2bc3788af48d4a6a001c94ad 169 Gene3D G3DSA:1.20.120.450 7 144 1.3E-6 T 26-04-2016 IPR027369 DinB/YfiT-like putative metal-dependent hydrolase smi_1048 60f798fe2bc3788af48d4a6a001c94ad 169 PANTHER PTHR40658:SF1 1 168 6.7E-93 T 26-04-2016 smi_1048 60f798fe2bc3788af48d4a6a001c94ad 169 PIRSF PIRSF031551 1 169 5.9E-59 T 26-04-2016 IPR012550 Protein of unknown function DUF1706 smi_1048 60f798fe2bc3788af48d4a6a001c94ad 169 PANTHER PTHR40658 1 168 6.7E-93 T 26-04-2016 smi_1048 60f798fe2bc3788af48d4a6a001c94ad 169 SUPERFAMILY SSF109854 44 142 9.62E-5 T 26-04-2016 smi_0299 e6b41e7d5d1beb63f7416223ac0be734 432 Pfam PF02646 RmuC family 127 410 1.3E-70 T 26-04-2016 IPR003798 DNA recombination RmuC smi_0299 e6b41e7d5d1beb63f7416223ac0be734 432 Gene3D G3DSA:1.20.120.20 55 161 8.8E-4 T 26-04-2016 smi_0299 e6b41e7d5d1beb63f7416223ac0be734 432 SUPERFAMILY SSF47162 46 161 1.96E-5 T 26-04-2016 smi_0299 e6b41e7d5d1beb63f7416223ac0be734 432 PANTHER PTHR30563 1 431 5.6E-130 T 26-04-2016 smi_2068 a4c226b300c309996e5c28e348a77631 275 PANTHER PTHR24220:SF435 6 274 7.8E-115 T 26-04-2016 smi_2068 a4c226b300c309996e5c28e348a77631 275 SMART SM00382 32 217 3.6E-15 T 26-04-2016 IPR003593 AAA+ ATPase domain smi_2068 a4c226b300c309996e5c28e348a77631 275 TIGRFAM TIGR04520 ECF_ATPase_1: energy-coupling factor transporter ATPase 5 272 1.3E-115 T 26-04-2016 IPR030947 Energy-coupling factor transporter ATP-binding protein EcfA1 smi_2068 a4c226b300c309996e5c28e348a77631 275 PANTHER PTHR24220 6 274 7.8E-115 T 26-04-2016 smi_2068 a4c226b300c309996e5c28e348a77631 275 SUPERFAMILY SSF52540 4 231 7.23E-65 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_2068 a4c226b300c309996e5c28e348a77631 275 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 26-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 smi_2068 a4c226b300c309996e5c28e348a77631 275 Gene3D G3DSA:3.40.50.300 2 232 2.4E-74 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_2068 a4c226b300c309996e5c28e348a77631 275 Pfam PF00005 ABC transporter 24 169 7.2E-35 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 smi_1474 e598d4c8a9d3ea999a0a632fe3a6bbb7 412 Pfam PF13167 GTP-binding GTPase N-terminal 27 113 3.3E-31 T 26-04-2016 IPR025121 GTPase HflX, N-terminal smi_1474 e598d4c8a9d3ea999a0a632fe3a6bbb7 412 Hamap MF_00900 GTPase HflX [hflX]. 28 384 42.677 T 26-04-2016 IPR016496 GTPase HflX GO:0005525 smi_1474 e598d4c8a9d3ea999a0a632fe3a6bbb7 412 Pfam PF01926 50S ribosome-binding GTPase 200 319 4.9E-18 T 26-04-2016 IPR006073 GTP binding domain GO:0005525 smi_1474 e598d4c8a9d3ea999a0a632fe3a6bbb7 412 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 10 352 4.3E-131 T 26-04-2016 IPR016496 GTPase HflX GO:0005525 smi_1474 e598d4c8a9d3ea999a0a632fe3a6bbb7 412 PANTHER PTHR10229 1 399 4.8E-149 T 26-04-2016 IPR016496 GTPase HflX GO:0005525 smi_1474 e598d4c8a9d3ea999a0a632fe3a6bbb7 412 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 197 330 3.3E-13 T 26-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 smi_1474 e598d4c8a9d3ea999a0a632fe3a6bbb7 412 Gene3D G3DSA:3.40.50.300 199 355 1.4E-30 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1474 e598d4c8a9d3ea999a0a632fe3a6bbb7 412 Pfam PF16360 GTP-binding GTPase Middle Region 115 193 1.1E-28 T 26-04-2016 IPR032305 GTP-binding protein, middle domain smi_1474 e598d4c8a9d3ea999a0a632fe3a6bbb7 412 SUPERFAMILY SSF52540 199 360 1.03E-32 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1474 e598d4c8a9d3ea999a0a632fe3a6bbb7 412 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 268 286 6.7E-8 T 26-04-2016 IPR006073 GTP binding domain GO:0005525 smi_1474 e598d4c8a9d3ea999a0a632fe3a6bbb7 412 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 201 221 6.7E-8 T 26-04-2016 IPR006073 GTP binding domain GO:0005525 smi_1474 e598d4c8a9d3ea999a0a632fe3a6bbb7 412 PIRSF PIRSF006809 2 412 8.5E-138 T 26-04-2016 IPR016496 GTPase HflX GO:0005525 smi_0906 ba7f1354f23eb3dac77067cdd3fc94b2 340 SUPERFAMILY SSF56752 4 336 7.06E-98 T 26-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 smi_0906 ba7f1354f23eb3dac77067cdd3fc94b2 340 TIGRFAM TIGR01123 ilvE_II: branched-chain amino acid aminotransferase 30 339 1.1E-135 T 26-04-2016 IPR005786 Branched-chain amino acid aminotransferase II GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|Reactome: REACT_13 smi_0906 ba7f1354f23eb3dac77067cdd3fc94b2 340 PANTHER PTHR11825 4 338 2.8E-156 T 26-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 smi_0906 ba7f1354f23eb3dac77067cdd3fc94b2 340 Gene3D G3DSA:3.20.10.10 161 325 6.3E-54 T 26-04-2016 smi_0906 ba7f1354f23eb3dac77067cdd3fc94b2 340 PIRSF PIRSF006468 2 340 4.3E-115 T 26-04-2016 IPR005786 Branched-chain amino acid aminotransferase II GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|Reactome: REACT_13 smi_0906 ba7f1354f23eb3dac77067cdd3fc94b2 340 Pfam PF01063 Amino-transferase class IV 55 293 5.2E-32 T 26-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 smi_0906 ba7f1354f23eb3dac77067cdd3fc94b2 340 PANTHER PTHR11825:SF2 4 338 2.8E-156 T 26-04-2016 smi_0906 ba7f1354f23eb3dac77067cdd3fc94b2 340 Gene3D G3DSA:3.30.470.10 3 160 2.9E-65 T 26-04-2016 smi_0906 ba7f1354f23eb3dac77067cdd3fc94b2 340 ProSitePatterns PS00770 Aminotransferases class-IV signature. 220 249 - T 26-04-2016 IPR018300 Aminotransferase, class IV, conserved site GO:0003824|GO:0008152 Reactome: REACT_13 smi_0394 d3584c3a47aebdcdcbb59fba33a3ce6f 892 SUPERFAMILY SSF52540 594 736 1.32E-32 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0394 d3584c3a47aebdcdcbb59fba33a3ce6f 892 SUPERFAMILY SSF52540 405 550 1.32E-32 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0394 d3584c3a47aebdcdcbb59fba33a3ce6f 892 Pfam PF04851 Type III restriction enzyme, res subunit 400 549 9.7E-20 T 26-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 smi_0394 d3584c3a47aebdcdcbb59fba33a3ce6f 892 SMART SM00487 388 580 4.0E-15 T 26-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain smi_0394 d3584c3a47aebdcdcbb59fba33a3ce6f 892 Gene3D G3DSA:3.40.50.300 608 760 2.3E-12 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0394 d3584c3a47aebdcdcbb59fba33a3ce6f 892 Pfam PF00271 Helicase conserved C-terminal domain 616 724 2.3E-10 T 26-04-2016 IPR001650 Helicase, C-terminal smi_0394 d3584c3a47aebdcdcbb59fba33a3ce6f 892 PANTHER PTHR11274 474 549 2.5E-19 T 26-04-2016 smi_0394 d3584c3a47aebdcdcbb59fba33a3ce6f 892 PANTHER PTHR11274 396 458 2.5E-19 T 26-04-2016 smi_0394 d3584c3a47aebdcdcbb59fba33a3ce6f 892 SMART SM00490 641 725 0.0088 T 26-04-2016 IPR001650 Helicase, C-terminal smi_0394 d3584c3a47aebdcdcbb59fba33a3ce6f 892 Gene3D G3DSA:3.40.50.300 381 566 3.6E-28 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0646 e277bba484ed53d726b1ed0d3ef4f156 282 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 4 210 9.1E-24 T 26-04-2016 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type smi_0646 e277bba484ed53d726b1ed0d3ef4f156 282 PANTHER PTHR11124 107 282 2.3E-107 T 26-04-2016 IPR000979 Phosphodiesterase MJ0936/Vps29 smi_0646 e277bba484ed53d726b1ed0d3ef4f156 282 PANTHER PTHR11124 1 76 2.3E-107 T 26-04-2016 IPR000979 Phosphodiesterase MJ0936/Vps29 smi_0646 e277bba484ed53d726b1ed0d3ef4f156 282 PANTHER PTHR11124:SF2 107 282 2.3E-107 T 26-04-2016 smi_0646 e277bba484ed53d726b1ed0d3ef4f156 282 PANTHER PTHR11124:SF2 1 76 2.3E-107 T 26-04-2016 smi_0646 e277bba484ed53d726b1ed0d3ef4f156 282 Gene3D G3DSA:3.60.21.10 3 251 5.9E-54 T 26-04-2016 IPR029052 Metallo-dependent phosphatase-like smi_0646 e277bba484ed53d726b1ed0d3ef4f156 282 SUPERFAMILY SSF56300 4 244 1.27E-53 T 26-04-2016 IPR029052 Metallo-dependent phosphatase-like smi_0646 e277bba484ed53d726b1ed0d3ef4f156 282 PIRSF PIRSF000883 4 254 7.4E-81 T 26-04-2016 IPR011152 Phosphoesterase MJ0912 smi_1410 b910419f5a9f39c438c96bd3f251e819 218 Gene3D G3DSA:3.10.580.10 1 132 1.3E-35 T 26-04-2016 smi_1410 b910419f5a9f39c438c96bd3f251e819 218 Pfam PF00571 CBS domain 3 55 2.8E-16 T 26-04-2016 IPR000644 CBS domain smi_1410 b910419f5a9f39c438c96bd3f251e819 218 Pfam PF00571 CBS domain 77 131 1.1E-11 T 26-04-2016 IPR000644 CBS domain smi_1410 b910419f5a9f39c438c96bd3f251e819 218 PANTHER PTHR11911:SF104 1 133 8.8E-65 T 26-04-2016 smi_1410 b910419f5a9f39c438c96bd3f251e819 218 SUPERFAMILY SSF55021 137 198 1.37E-6 T 26-04-2016 smi_1410 b910419f5a9f39c438c96bd3f251e819 218 PANTHER PTHR11911 1 133 8.8E-65 T 26-04-2016 smi_1410 b910419f5a9f39c438c96bd3f251e819 218 SMART SM00116 10 57 3.3E-12 T 26-04-2016 IPR000644 CBS domain smi_1410 b910419f5a9f39c438c96bd3f251e819 218 SMART SM00116 84 131 9.2E-9 T 26-04-2016 IPR000644 CBS domain smi_1410 b910419f5a9f39c438c96bd3f251e819 218 Gene3D G3DSA:3.30.70.260 141 203 1.6E-14 T 26-04-2016 smi_1410 b910419f5a9f39c438c96bd3f251e819 218 SUPERFAMILY SSF54631 1 132 1.52E-35 T 26-04-2016 smi_1744 d85a0192db56fa954655ac58d7bf8606 336 PANTHER PTHR10578:SF3 227 328 4.1E-106 T 26-04-2016 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent GO:0004452|GO:0005737|GO:0008299|GO:0010181 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922 smi_1744 d85a0192db56fa954655ac58d7bf8606 336 PANTHER PTHR10578:SF3 15 211 4.1E-106 T 26-04-2016 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent GO:0004452|GO:0005737|GO:0008299|GO:0010181 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922 smi_1744 d85a0192db56fa954655ac58d7bf8606 336 PIRSF PIRSF003314 1 334 5.4E-112 T 26-04-2016 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent GO:0004452|GO:0005737|GO:0008299|GO:0010181 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922 smi_1744 d85a0192db56fa954655ac58d7bf8606 336 Hamap MF_00354 Isopentenyl-diphosphate delta-isomerase [fni]. 2 324 32.855 T 26-04-2016 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent GO:0004452|GO:0005737|GO:0008299|GO:0010181 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922 smi_1744 d85a0192db56fa954655ac58d7bf8606 336 Gene3D G3DSA:3.20.20.70 20 321 9.4E-110 T 26-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 smi_1744 d85a0192db56fa954655ac58d7bf8606 336 PANTHER PTHR10578 227 328 4.1E-106 T 26-04-2016 smi_1744 d85a0192db56fa954655ac58d7bf8606 336 PANTHER PTHR10578 15 211 4.1E-106 T 26-04-2016 smi_1744 d85a0192db56fa954655ac58d7bf8606 336 TIGRFAM TIGR02151 IPP_isom_2: isopentenyl-diphosphate delta-isomerase, type 2 4 323 9.9E-110 T 26-04-2016 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent GO:0004452|GO:0005737|GO:0008299|GO:0010181 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922 smi_1744 d85a0192db56fa954655ac58d7bf8606 336 SUPERFAMILY SSF51395 20 331 2.47E-71 T 26-04-2016 smi_1744 d85a0192db56fa954655ac58d7bf8606 336 Pfam PF01070 FMN-dependent dehydrogenase 159 317 1.0E-18 T 26-04-2016 IPR000262 FMN-dependent dehydrogenase GO:0016491 smi_1475 d100d0805aa899ae5a6bf1f05df221f6 294 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 5 293 28.167 T 26-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 smi_1475 d100d0805aa899ae5a6bf1f05df221f6 294 Gene3D G3DSA:3.40.50.300 2 166 8.3E-52 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1475 d100d0805aa899ae5a6bf1f05df221f6 294 Pfam PF01715 IPP transferase 38 269 6.4E-70 T 26-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 smi_1475 d100d0805aa899ae5a6bf1f05df221f6 294 Gene3D G3DSA:1.10.287.890 188 267 4.8E-31 T 26-04-2016 smi_1475 d100d0805aa899ae5a6bf1f05df221f6 294 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 5 273 8.5E-75 T 26-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 smi_1475 d100d0805aa899ae5a6bf1f05df221f6 294 PANTHER PTHR11088 1 268 2.9E-101 T 26-04-2016 smi_1475 d100d0805aa899ae5a6bf1f05df221f6 294 SUPERFAMILY SSF52540 5 142 7.81E-18 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1475 d100d0805aa899ae5a6bf1f05df221f6 294 SUPERFAMILY SSF52540 106 259 1.58E-10 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1475 d100d0805aa899ae5a6bf1f05df221f6 294 SUPERFAMILY SSF52540 4 46 1.58E-10 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1687 a10333fb6ef9fb4fc0971242ba906858 454 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 3 448 5.5E-86 T 26-04-2016 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 smi_1687 a10333fb6ef9fb4fc0971242ba906858 454 Gene3D G3DSA:3.40.1160.10 105 288 2.0E-52 T 26-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 smi_1687 a10333fb6ef9fb4fc0971242ba906858 454 Gene3D G3DSA:3.40.1160.10 1 54 2.0E-52 T 26-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 smi_1687 a10333fb6ef9fb4fc0971242ba906858 454 SUPERFAMILY SSF53633 1 288 9.03E-69 T 26-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 smi_1687 a10333fb6ef9fb4fc0971242ba906858 454 PANTHER PTHR21499 3 448 5.7E-145 T 26-04-2016 smi_1687 a10333fb6ef9fb4fc0971242ba906858 454 Pfam PF00696 Amino acid kinase family 2 276 2.0E-44 T 26-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 smi_1687 a10333fb6ef9fb4fc0971242ba906858 454 PIRSF PIRSF000726 1 454 4.4E-84 T 26-04-2016 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 smi_1687 a10333fb6ef9fb4fc0971242ba906858 454 Pfam PF13840 ACT domain 380 444 1.8E-12 T 26-04-2016 IPR027795 GATS-like ACT domain smi_1687 a10333fb6ef9fb4fc0971242ba906858 454 SUPERFAMILY SSF55021 297 359 2.29E-8 T 26-04-2016 smi_1687 a10333fb6ef9fb4fc0971242ba906858 454 SUPERFAMILY SSF55021 372 450 2.06E-21 T 26-04-2016 smi_1687 a10333fb6ef9fb4fc0971242ba906858 454 ProSitePatterns PS00324 Aspartokinase signature. 3 11 - T 26-04-2016 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 smi_1687 a10333fb6ef9fb4fc0971242ba906858 454 PANTHER PTHR21499:SF3 3 448 5.7E-145 T 26-04-2016 smi_0564 106f2265ededf90231c495c4080a46b6 247 SUPERFAMILY SSF75217 68 244 5.23E-51 T 26-04-2016 IPR029028 Alpha/beta knot methyltransferases smi_0564 106f2265ededf90231c495c4080a46b6 247 Pfam PF04452 RNA methyltransferase 16 240 1.7E-66 T 26-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 smi_0564 106f2265ededf90231c495c4080a46b6 247 PIRSF PIRSF015601 1 245 1.1E-49 T 26-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 smi_0564 106f2265ededf90231c495c4080a46b6 247 SUPERFAMILY SSF88697 2 61 1.07E-9 T 26-04-2016 IPR015947 PUA-like domain smi_0564 106f2265ededf90231c495c4080a46b6 247 PANTHER PTHR30027:SF3 1 247 2.2E-75 T 26-04-2016 smi_0564 106f2265ededf90231c495c4080a46b6 247 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 15 244 2.1E-49 T 26-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 smi_0564 106f2265ededf90231c495c4080a46b6 247 PANTHER PTHR30027 1 247 2.2E-75 T 26-04-2016 smi_0564 106f2265ededf90231c495c4080a46b6 247 Gene3D G3DSA:3.40.1280.10 1 244 1.0E-67 T 26-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal smi_1312 d943a9dbc728f0419f8af16f9db5868f 178 PANTHER PTHR11910 21 178 3.4E-31 T 26-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 smi_1312 d943a9dbc728f0419f8af16f9db5868f 178 Gene3D G3DSA:1.10.520.20 7 94 3.4E-12 T 26-04-2016 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain smi_1312 d943a9dbc728f0419f8af16f9db5868f 178 Hamap MF_01416 ATP synthase subunit delta [atpD]. 4 178 12.996 T 26-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 smi_1312 d943a9dbc728f0419f8af16f9db5868f 178 PRINTS PR00125 ATP synthase delta subunit signature 75 86 5.7E-11 T 26-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 smi_1312 d943a9dbc728f0419f8af16f9db5868f 178 PRINTS PR00125 ATP synthase delta subunit signature 8 27 5.7E-11 T 26-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 smi_1312 d943a9dbc728f0419f8af16f9db5868f 178 PRINTS PR00125 ATP synthase delta subunit signature 152 170 5.7E-11 T 26-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 smi_1312 d943a9dbc728f0419f8af16f9db5868f 178 PRINTS PR00125 ATP synthase delta subunit signature 137 152 5.7E-11 T 26-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 smi_1312 d943a9dbc728f0419f8af16f9db5868f 178 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 11 176 5.9E-25 T 26-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 smi_1312 d943a9dbc728f0419f8af16f9db5868f 178 SUPERFAMILY SSF47928 5 102 6.54E-15 T 26-04-2016 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain smi_1312 d943a9dbc728f0419f8af16f9db5868f 178 Pfam PF00213 ATP synthase delta (OSCP) subunit 10 177 6.7E-32 T 26-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 smi_0357 f2d0a46fc5db6c0b820c05413b1756d5 379 Pfam PF00684 DnaJ central domain 149 213 5.4E-14 T 26-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 smi_0357 f2d0a46fc5db6c0b820c05413b1756d5 379 PRINTS PR00625 DnaJ domain signature 7 25 1.5E-30 T 26-04-2016 IPR001623 DnaJ domain smi_0357 f2d0a46fc5db6c0b820c05413b1756d5 379 PRINTS PR00625 DnaJ domain signature 25 40 1.5E-30 T 26-04-2016 IPR001623 DnaJ domain smi_0357 f2d0a46fc5db6c0b820c05413b1756d5 379 PRINTS PR00625 DnaJ domain signature 61 80 1.5E-30 T 26-04-2016 IPR001623 DnaJ domain smi_0357 f2d0a46fc5db6c0b820c05413b1756d5 379 PRINTS PR00625 DnaJ domain signature 41 61 1.5E-30 T 26-04-2016 IPR001623 DnaJ domain smi_0357 f2d0a46fc5db6c0b820c05413b1756d5 379 SUPERFAMILY SSF49493 206 270 1.44E-19 T 26-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 smi_0357 f2d0a46fc5db6c0b820c05413b1756d5 379 SUPERFAMILY SSF49493 116 140 1.44E-19 T 26-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 smi_0357 f2d0a46fc5db6c0b820c05413b1756d5 379 PANTHER PTHR24078:SF190 2 356 2.8E-168 T 26-04-2016 smi_0357 f2d0a46fc5db6c0b820c05413b1756d5 379 SUPERFAMILY SSF46565 1 104 4.45E-35 T 26-04-2016 IPR001623 DnaJ domain smi_0357 f2d0a46fc5db6c0b820c05413b1756d5 379 Gene3D G3DSA:2.10.230.10 139 211 4.3E-21 T 26-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 smi_0357 f2d0a46fc5db6c0b820c05413b1756d5 379 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 5 355 1.2E-138 T 26-04-2016 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 smi_0357 f2d0a46fc5db6c0b820c05413b1756d5 379 Pfam PF01556 DnaJ C terminal domain 122 339 3.4E-39 T 26-04-2016 IPR002939 Chaperone DnaJ, C-terminal smi_0357 f2d0a46fc5db6c0b820c05413b1756d5 379 Gene3D G3DSA:1.10.287.110 1 108 2.4E-37 T 26-04-2016 IPR001623 DnaJ domain smi_0357 f2d0a46fc5db6c0b820c05413b1756d5 379 ProSitePatterns PS00636 Nt-dnaJ domain signature. 46 65 - T 26-04-2016 IPR018253 DnaJ domain, conserved site smi_0357 f2d0a46fc5db6c0b820c05413b1756d5 379 PANTHER PTHR24078 2 356 2.8E-168 T 26-04-2016 smi_0357 f2d0a46fc5db6c0b820c05413b1756d5 379 SUPERFAMILY SSF57938 136 216 9.68E-20 T 26-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 smi_0357 f2d0a46fc5db6c0b820c05413b1756d5 379 SMART SM00271 4 61 9.0E-30 T 26-04-2016 IPR001623 DnaJ domain smi_0357 f2d0a46fc5db6c0b820c05413b1756d5 379 SUPERFAMILY SSF49493 265 349 9.81E-22 T 26-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 smi_0357 f2d0a46fc5db6c0b820c05413b1756d5 379 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 375 39.283 T 26-04-2016 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 smi_0357 f2d0a46fc5db6c0b820c05413b1756d5 379 Gene3D G3DSA:2.60.260.20 212 260 1.8E-23 T 26-04-2016 smi_0357 f2d0a46fc5db6c0b820c05413b1756d5 379 Gene3D G3DSA:2.60.260.20 263 340 1.3E-20 T 26-04-2016 smi_0357 f2d0a46fc5db6c0b820c05413b1756d5 379 Gene3D G3DSA:2.60.260.20 113 138 1.8E-23 T 26-04-2016 smi_0357 f2d0a46fc5db6c0b820c05413b1756d5 379 Pfam PF00226 DnaJ domain 6 66 7.4E-26 T 26-04-2016 IPR001623 DnaJ domain smi_1575 530c41ba22830104a2e46147864873fb 95 Pfam PF00581 Rhodanese-like domain 9 94 2.8E-12 T 26-04-2016 IPR001763 Rhodanese-like domain smi_1575 530c41ba22830104a2e46147864873fb 95 Gene3D G3DSA:3.40.250.10 2 94 9.1E-27 T 26-04-2016 IPR001763 Rhodanese-like domain smi_1575 530c41ba22830104a2e46147864873fb 95 SUPERFAMILY SSF52821 2 93 7.99E-29 T 26-04-2016 IPR001763 Rhodanese-like domain smi_1575 530c41ba22830104a2e46147864873fb 95 SMART SM00450 4 95 1.1E-13 T 26-04-2016 IPR001763 Rhodanese-like domain smi_2054 72561959415ad1d494cad87bd40301a3 150 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 26-04-2016 IPR020070 Ribosomal protein L9, N-terminal smi_2054 72561959415ad1d494cad87bd40301a3 150 SUPERFAMILY SSF55653 57 149 3.27E-23 T 26-04-2016 IPR020069 Ribosomal protein L9, C-terminal smi_2054 72561959415ad1d494cad87bd40301a3 150 PANTHER PTHR21368 1 149 1.2E-38 T 26-04-2016 IPR000244 Ribosomal protein L9 GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_2054 72561959415ad1d494cad87bd40301a3 150 SUPERFAMILY SSF55658 1 56 8.72E-15 T 26-04-2016 IPR009027 Ribosomal protein L9/RNase H1, N-terminal smi_2054 72561959415ad1d494cad87bd40301a3 150 Gene3D G3DSA:3.10.430.100 62 149 2.7E-25 T 26-04-2016 IPR020069 Ribosomal protein L9, C-terminal smi_2054 72561959415ad1d494cad87bd40301a3 150 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 149 9.3E-37 T 26-04-2016 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_2054 72561959415ad1d494cad87bd40301a3 150 Gene3D G3DSA:3.40.5.10 1 51 1.7E-20 T 26-04-2016 IPR020070 Ribosomal protein L9, N-terminal smi_2054 72561959415ad1d494cad87bd40301a3 150 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 150 22.813 T 26-04-2016 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_2054 72561959415ad1d494cad87bd40301a3 150 Pfam PF03948 Ribosomal protein L9, C-terminal domain 63 148 1.7E-24 T 26-04-2016 IPR020069 Ribosomal protein L9, C-terminal smi_2054 72561959415ad1d494cad87bd40301a3 150 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 45 1.5E-19 T 26-04-2016 IPR020070 Ribosomal protein L9, N-terminal smi_0275 e4d240c6fbed35b51e9b4a7bf8eb0a79 339 SMART SM00829 10 335 9.4E-8 T 26-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 smi_0275 e4d240c6fbed35b51e9b4a7bf8eb0a79 339 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 132 2.9E-30 T 26-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 smi_0275 e4d240c6fbed35b51e9b4a7bf8eb0a79 339 Pfam PF00107 Zinc-binding dehydrogenase 173 299 4.4E-26 T 26-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 smi_0275 e4d240c6fbed35b51e9b4a7bf8eb0a79 339 Gene3D G3DSA:3.90.180.10 1 165 3.7E-60 T 26-04-2016 IPR011032 GroES-like smi_0275 e4d240c6fbed35b51e9b4a7bf8eb0a79 339 PANTHER PTHR11695 13 339 8.1E-144 T 26-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 smi_0275 e4d240c6fbed35b51e9b4a7bf8eb0a79 339 SUPERFAMILY SSF51735 135 304 6.27E-41 T 26-04-2016 IPR016040 NAD(P)-binding domain smi_0275 e4d240c6fbed35b51e9b4a7bf8eb0a79 339 PANTHER PTHR11695:SF498 13 339 8.1E-144 T 26-04-2016 smi_0275 e4d240c6fbed35b51e9b4a7bf8eb0a79 339 SUPERFAMILY SSF50129 1 170 1.25E-47 T 26-04-2016 IPR011032 GroES-like smi_0275 e4d240c6fbed35b51e9b4a7bf8eb0a79 339 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 58 72 - T 26-04-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 smi_0275 e4d240c6fbed35b51e9b4a7bf8eb0a79 339 Gene3D G3DSA:3.40.50.720 166 285 3.9E-32 T 26-04-2016 IPR016040 NAD(P)-binding domain smi_1835 37a66eacce792e04f4956a9a7ef86690 589 Gene3D G3DSA:1.20.1560.10 7 318 8.5E-51 T 26-04-2016 smi_1835 37a66eacce792e04f4956a9a7ef86690 589 SUPERFAMILY SSF52540 335 579 8.52E-80 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1835 37a66eacce792e04f4956a9a7ef86690 589 SMART SM00382 366 561 7.6E-16 T 26-04-2016 IPR003593 AAA+ ATPase domain smi_1835 37a66eacce792e04f4956a9a7ef86690 589 Gene3D G3DSA:3.40.50.300 339 573 3.6E-71 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1835 37a66eacce792e04f4956a9a7ef86690 589 PANTHER PTHR24221 1 588 4.5E-180 T 26-04-2016 smi_1835 37a66eacce792e04f4956a9a7ef86690 589 Pfam PF00664 ABC transporter transmembrane region 17 292 8.0E-29 T 26-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 smi_1835 37a66eacce792e04f4956a9a7ef86690 589 SUPERFAMILY SSF90123 6 318 4.05E-56 T 26-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 smi_1835 37a66eacce792e04f4956a9a7ef86690 589 Pfam PF00005 ABC transporter 358 507 3.2E-31 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 smi_1835 37a66eacce792e04f4956a9a7ef86690 589 PANTHER PTHR24221:SF190 1 588 4.5E-180 T 26-04-2016 smi_1835 37a66eacce792e04f4956a9a7ef86690 589 ProSitePatterns PS00211 ABC transporters family signature. 481 495 - T 26-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 smi_1554 450c18353262ab99df0c492079c626b7 303 Pfam PF14527 WhiA LAGLIDADG-like domain 122 214 4.5E-28 T 26-04-2016 smi_1554 450c18353262ab99df0c492079c626b7 303 TIGRFAM TIGR00647 DNA_bind_WhiA: DNA-binding protein WhiA 4 301 9.3E-117 T 26-04-2016 smi_1554 450c18353262ab99df0c492079c626b7 303 Pfam PF02650 WhiA C-terminal HTH domain 218 300 1.2E-30 T 26-04-2016 IPR023054 Sporulation regulator WhiA, C-terminal smi_1554 450c18353262ab99df0c492079c626b7 303 Gene3D G3DSA:3.10.28.10 113 207 9.9E-8 T 26-04-2016 IPR027434 Homing endonuclease GO:0004519 smi_1554 450c18353262ab99df0c492079c626b7 303 SUPERFAMILY SSF55608 116 217 4.25E-15 T 26-04-2016 IPR027434 Homing endonuclease GO:0004519 smi_1554 450c18353262ab99df0c492079c626b7 303 Hamap MF_01420 Putative sporulation transcription regulator WhiA [whiA]. 3 303 28.116 T 26-04-2016 IPR003802 Sporulation regulator WhiA GO:0043937 smi_1554 450c18353262ab99df0c492079c626b7 303 PANTHER PTHR37307 2 303 8.4E-121 T 26-04-2016 smi_1554 450c18353262ab99df0c492079c626b7 303 Pfam PF10298 WhiA N-terminal LAGLIDADG-like domain 19 99 3.5E-26 T 26-04-2016 IPR018478 Sporulation transcription regulator WhiA, N-terminal domain smi_1435 e5e2e5a444c76ea3c56d79cd43dd8c79 308 PIRSF PIRSF000138 1 301 7.5E-102 T 26-04-2016 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent GO:0010181|GO:0016491|GO:0055114 smi_1435 e5e2e5a444c76ea3c56d79cd43dd8c79 308 Pfam PF01070 FMN-dependent dehydrogenase 24 297 1.6E-81 T 26-04-2016 IPR000262 FMN-dependent dehydrogenase GO:0016491 smi_1435 e5e2e5a444c76ea3c56d79cd43dd8c79 308 Gene3D G3DSA:3.20.20.70 14 298 3.2E-96 T 26-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 smi_1435 e5e2e5a444c76ea3c56d79cd43dd8c79 308 PANTHER PTHR10578:SF65 1 296 3.0E-126 T 26-04-2016 smi_1435 e5e2e5a444c76ea3c56d79cd43dd8c79 308 SUPERFAMILY SSF51395 14 297 7.33E-64 T 26-04-2016 smi_1435 e5e2e5a444c76ea3c56d79cd43dd8c79 308 PANTHER PTHR10578 1 296 3.0E-126 T 26-04-2016 smi_1595 a7a5e2137778917e02b8fdc001525416 447 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 15 314 1.9E-132 T 26-04-2016 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 smi_1595 a7a5e2137778917e02b8fdc001525416 447 SUPERFAMILY SSF52374 2 315 1.23E-101 T 26-04-2016 smi_1595 a7a5e2137778917e02b8fdc001525416 447 SMART SM00840 344 398 3.6E-12 T 26-04-2016 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 smi_1595 a7a5e2137778917e02b8fdc001525416 447 SUPERFAMILY SSF47323 329 446 2.22E-31 T 26-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 smi_1595 a7a5e2137778917e02b8fdc001525416 447 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 2 446 2.1E-166 T 26-04-2016 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16|Reactome: REACT_71 smi_1595 a7a5e2137778917e02b8fdc001525416 447 Pfam PF09190 DALR domain 344 396 2.8E-15 T 26-04-2016 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 smi_1595 a7a5e2137778917e02b8fdc001525416 447 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 2 447 37.709 T 26-04-2016 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16|Reactome: REACT_71 smi_1595 a7a5e2137778917e02b8fdc001525416 447 Gene3D G3DSA:1.20.120.640 309 390 8.4E-16 T 26-04-2016 smi_1595 a7a5e2137778917e02b8fdc001525416 447 Gene3D G3DSA:3.40.50.620 19 307 7.4E-109 T 26-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold smi_1595 a7a5e2137778917e02b8fdc001525416 447 PANTHER PTHR10890 1 444 4.9E-230 T 26-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 smi_1595 a7a5e2137778917e02b8fdc001525416 447 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 224 245 8.5E-29 T 26-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 smi_1595 a7a5e2137778917e02b8fdc001525416 447 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 61 70 8.5E-29 T 26-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 smi_1595 a7a5e2137778917e02b8fdc001525416 447 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 193 211 8.5E-29 T 26-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 smi_1595 a7a5e2137778917e02b8fdc001525416 447 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 25 36 8.5E-29 T 26-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 smi_1076 33bcb5cda28034defcf365c05dd65d6e 252 PANTHER PTHR24220 5 252 6.3E-108 T 26-04-2016 smi_1076 33bcb5cda28034defcf365c05dd65d6e 252 SMART SM00382 34 222 4.3E-14 T 26-04-2016 IPR003593 AAA+ ATPase domain smi_1076 33bcb5cda28034defcf365c05dd65d6e 252 SUPERFAMILY SSF52540 3 227 4.83E-67 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1076 33bcb5cda28034defcf365c05dd65d6e 252 PANTHER PTHR24220:SF494 5 252 6.3E-108 T 26-04-2016 smi_1076 33bcb5cda28034defcf365c05dd65d6e 252 Gene3D G3DSA:3.40.50.300 2 225 2.9E-66 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1076 33bcb5cda28034defcf365c05dd65d6e 252 TIGRFAM TIGR03608 L_ocin_972_ABC: putative bacteriocin export ABC transporter, lactococcin 972 group 6 217 6.1E-79 T 26-04-2016 IPR019895 Putative bacteriocin export ABC transporter, lactococcin 972 group smi_1076 33bcb5cda28034defcf365c05dd65d6e 252 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 26-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 smi_1076 33bcb5cda28034defcf365c05dd65d6e 252 Pfam PF00005 ABC transporter 25 173 2.0E-34 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 smi_0484 2cff634a278f85a95f3ab7b3727220bc 257 PANTHER PTHR10108 34 246 9.2E-21 T 26-04-2016 smi_0484 2cff634a278f85a95f3ab7b3727220bc 257 Gene3D G3DSA:3.40.50.150 35 255 1.2E-31 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase smi_0484 2cff634a278f85a95f3ab7b3727220bc 257 SUPERFAMILY SSF53335 29 255 2.32E-31 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase smi_0484 2cff634a278f85a95f3ab7b3727220bc 257 PANTHER PTHR10108:SF705 34 246 9.2E-21 T 26-04-2016 smi_0484 2cff634a278f85a95f3ab7b3727220bc 257 Pfam PF08241 Methyltransferase domain 49 146 2.0E-20 T 26-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 smi_1924 606755b75cc8f5a6e13d0a2ffbbd39ed 353 SUPERFAMILY SSF53092 1 126 8.37E-27 T 26-04-2016 IPR028980 Creatinase/Aminopeptidase P, N-terminal smi_1924 606755b75cc8f5a6e13d0a2ffbbd39ed 353 Pfam PF01321 Creatinase/Prolidase N-terminal domain 4 127 2.6E-25 T 26-04-2016 IPR000587 Creatinase, N-terminal GO:0016787 smi_1924 606755b75cc8f5a6e13d0a2ffbbd39ed 353 PANTHER PTHR10804 1 352 1.3E-103 T 26-04-2016 smi_1924 606755b75cc8f5a6e13d0a2ffbbd39ed 353 Gene3D G3DSA:3.40.350.10 1 125 2.1E-31 T 26-04-2016 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal smi_1924 606755b75cc8f5a6e13d0a2ffbbd39ed 353 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 283 295 - T 26-04-2016 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site smi_1924 606755b75cc8f5a6e13d0a2ffbbd39ed 353 SUPERFAMILY SSF55920 96 348 2.49E-78 T 26-04-2016 IPR000994 Peptidase M24, structural domain smi_1924 606755b75cc8f5a6e13d0a2ffbbd39ed 353 Pfam PF00557 Metallopeptidase family M24 135 337 2.7E-63 T 26-04-2016 IPR000994 Peptidase M24, structural domain smi_1924 606755b75cc8f5a6e13d0a2ffbbd39ed 353 PANTHER PTHR10804:SF86 1 352 1.3E-103 T 26-04-2016 smi_1924 606755b75cc8f5a6e13d0a2ffbbd39ed 353 Gene3D G3DSA:3.90.230.10 126 353 3.2E-84 T 26-04-2016 IPR000994 Peptidase M24, structural domain smi_1139 6ba080631ceaf025f922fddb90ee5bf5 411 Hamap MF_00550 Peptidase T [pepT]. 3 406 56.695 T 26-04-2016 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 smi_1139 6ba080631ceaf025f922fddb90ee5bf5 411 SUPERFAMILY SSF55031 211 322 5.75E-40 T 26-04-2016 IPR011650 Peptidase M20, dimerisation domain smi_1139 6ba080631ceaf025f922fddb90ee5bf5 411 Gene3D G3DSA:3.30.70.360 212 321 1.7E-46 T 26-04-2016 IPR011650 Peptidase M20, dimerisation domain smi_1139 6ba080631ceaf025f922fddb90ee5bf5 411 Pfam PF01546 Peptidase family M20/M25/M40 141 401 4.0E-10 T 26-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 smi_1139 6ba080631ceaf025f922fddb90ee5bf5 411 PIRSF PIRSF037215 1 410 3.0E-177 T 26-04-2016 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 smi_1139 6ba080631ceaf025f922fddb90ee5bf5 411 PANTHER PTHR11014 133 411 1.5E-170 T 26-04-2016 smi_1139 6ba080631ceaf025f922fddb90ee5bf5 411 PANTHER PTHR11014 5 93 1.5E-170 T 26-04-2016 smi_1139 6ba080631ceaf025f922fddb90ee5bf5 411 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 76 85 - T 26-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 smi_1139 6ba080631ceaf025f922fddb90ee5bf5 411 Pfam PF07687 Peptidase dimerisation domain 209 309 9.8E-12 T 26-04-2016 IPR011650 Peptidase M20, dimerisation domain smi_1139 6ba080631ceaf025f922fddb90ee5bf5 411 PANTHER PTHR11014:SF3 133 411 1.5E-170 T 26-04-2016 smi_1139 6ba080631ceaf025f922fddb90ee5bf5 411 PANTHER PTHR11014:SF3 5 93 1.5E-170 T 26-04-2016 smi_1139 6ba080631ceaf025f922fddb90ee5bf5 411 SUPERFAMILY SSF53187 4 212 4.28E-70 T 26-04-2016 smi_1139 6ba080631ceaf025f922fddb90ee5bf5 411 SUPERFAMILY SSF53187 324 404 4.28E-70 T 26-04-2016 smi_1139 6ba080631ceaf025f922fddb90ee5bf5 411 TIGRFAM TIGR01882 peptidase-T: peptidase T 3 405 9.8E-196 T 26-04-2016 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 smi_1139 6ba080631ceaf025f922fddb90ee5bf5 411 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 140 179 - T 26-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 smi_1139 6ba080631ceaf025f922fddb90ee5bf5 411 Gene3D G3DSA:3.40.630.10 324 403 2.9E-107 T 26-04-2016 smi_1139 6ba080631ceaf025f922fddb90ee5bf5 411 Gene3D G3DSA:3.40.630.10 3 211 2.9E-107 T 26-04-2016 smi_1192 558774a2099a89cb20772e195fa1aee9 556 Gene3D G3DSA:3.40.50.300 248 441 1.8E-144 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1192 558774a2099a89cb20772e195fa1aee9 556 Gene3D G3DSA:3.40.50.300 13 128 1.8E-144 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1192 558774a2099a89cb20772e195fa1aee9 556 ProSitePatterns PS00721 Formate--tetrahydrofolate ligase signature 1. 103 113 - T 26-04-2016 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site GO:0004329|GO:0005524|GO:0009396 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 smi_1192 558774a2099a89cb20772e195fa1aee9 556 PANTHER PTHR10025 1 555 0.0 T 26-04-2016 smi_1192 558774a2099a89cb20772e195fa1aee9 556 SUPERFAMILY SSF52540 4 554 7.25E-242 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1192 558774a2099a89cb20772e195fa1aee9 556 Gene3D G3DSA:3.30.1510.10 129 246 7.8E-55 T 26-04-2016 smi_1192 558774a2099a89cb20772e195fa1aee9 556 Gene3D G3DSA:3.10.410.10 443 532 6.4E-39 T 26-04-2016 smi_1192 558774a2099a89cb20772e195fa1aee9 556 Pfam PF01268 Formate--tetrahydrofolate ligase 2 556 7.7E-265 T 26-04-2016 IPR000559 Formate-tetrahydrofolate ligase, FTHFS GO:0004329|GO:0005524|GO:0009396 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 smi_1192 558774a2099a89cb20772e195fa1aee9 556 ProSitePatterns PS00722 Formate--tetrahydrofolate ligase signature 2. 328 339 - T 26-04-2016 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site GO:0004329|GO:0005524|GO:0009396 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 smi_1192 558774a2099a89cb20772e195fa1aee9 556 Hamap MF_01543 Formate--tetrahydrofolate ligase [fhs]. 1 556 48.788 T 26-04-2016 IPR000559 Formate-tetrahydrofolate ligase, FTHFS GO:0004329|GO:0005524|GO:0009396 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 smi_1454 a540028d9efdd02fe93f77967a373d2d 241 Gene3D G3DSA:3.10.290.10 1 63 6.5E-8 T 26-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 smi_1454 a540028d9efdd02fe93f77967a373d2d 241 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 99 113 - T 26-04-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 smi_1454 a540028d9efdd02fe93f77967a373d2d 241 SUPERFAMILY SSF55174 1 83 6.59E-6 T 26-04-2016 smi_1454 a540028d9efdd02fe93f77967a373d2d 241 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 65 226 3.3E-42 T 26-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 smi_1454 a540028d9efdd02fe93f77967a373d2d 241 PANTHER PTHR21600:SF19 1 236 9.6E-58 T 26-04-2016 smi_1454 a540028d9efdd02fe93f77967a373d2d 241 SUPERFAMILY SSF55120 59 230 1.42E-39 T 26-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 smi_1454 a540028d9efdd02fe93f77967a373d2d 241 PANTHER PTHR21600 1 236 9.6E-58 T 26-04-2016 smi_1454 a540028d9efdd02fe93f77967a373d2d 241 Pfam PF00849 RNA pseudouridylate synthase 61 194 7.9E-17 T 26-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 smi_0754 bb88298e5e658d83eea5cd45248fbed6 390 PANTHER PTHR11061:SF15 1 387 7.5E-132 T 26-04-2016 smi_0754 bb88298e5e658d83eea5cd45248fbed6 390 Gene3D G3DSA:3.30.750.80 72 172 4.8E-22 T 26-04-2016 smi_0754 bb88298e5e658d83eea5cd45248fbed6 390 SUPERFAMILY SSF53335 79 374 8.75E-65 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase smi_0754 bb88298e5e658d83eea5cd45248fbed6 390 Gene3D G3DSA:3.40.50.150 178 388 1.8E-48 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase smi_0754 bb88298e5e658d83eea5cd45248fbed6 390 SUPERFAMILY SSF88697 4 70 3.98E-15 T 26-04-2016 IPR015947 PUA-like domain smi_0754 bb88298e5e658d83eea5cd45248fbed6 390 PANTHER PTHR11061 1 387 7.5E-132 T 26-04-2016 smi_0754 bb88298e5e658d83eea5cd45248fbed6 390 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 168 369 1.5E-29 T 26-04-2016 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 smi_0875 c397d8e7d69597757e42c6a519f1e313 186 Gene3D G3DSA:3.30.70.1280 1 88 2.7E-28 T 26-04-2016 smi_0875 c397d8e7d69597757e42c6a519f1e313 186 PANTHER PTHR36439:SF1 1 181 1.2E-45 T 26-04-2016 smi_0875 c397d8e7d69597757e42c6a519f1e313 186 Gene3D G3DSA:3.30.70.1260 89 180 2.2E-43 T 26-04-2016 smi_0875 c397d8e7d69597757e42c6a519f1e313 186 PANTHER PTHR36439 1 181 1.2E-45 T 26-04-2016 smi_0875 c397d8e7d69597757e42c6a519f1e313 186 PIRSF PIRSF008502 1 181 6.1E-32 T 26-04-2016 IPR012545 Protein of unknown function DUF1697 smi_0875 c397d8e7d69597757e42c6a519f1e313 186 Pfam PF08002 Protein of unknown function (DUF1697) 1 132 1.3E-32 T 26-04-2016 IPR012545 Protein of unknown function DUF1697 smi_0875 c397d8e7d69597757e42c6a519f1e313 186 SUPERFAMILY SSF160379 1 179 6.28E-50 T 26-04-2016 smi_1061 b39c61bcbda7061f9edd5427849f8c22 516 PANTHER PTHR11689:SF14 1 457 4.6E-84 T 26-04-2016 smi_1061 b39c61bcbda7061f9edd5427849f8c22 516 SUPERFAMILY SSF81340 15 438 7.98E-105 T 26-04-2016 IPR014743 Chloride channel, core GO:0005216|GO:0055085 smi_1061 b39c61bcbda7061f9edd5427849f8c22 516 Pfam PF00654 Voltage gated chloride channel 79 422 2.8E-88 T 26-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 smi_1061 b39c61bcbda7061f9edd5427849f8c22 516 Gene3D G3DSA:1.10.3080.10 19 437 5.9E-91 T 26-04-2016 IPR014743 Chloride channel, core GO:0005216|GO:0055085 smi_1061 b39c61bcbda7061f9edd5427849f8c22 516 PRINTS PR00762 Chloride channel signature 169 188 1.17E-26 T 26-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 smi_1061 b39c61bcbda7061f9edd5427849f8c22 516 PRINTS PR00762 Chloride channel signature 372 388 1.17E-26 T 26-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 smi_1061 b39c61bcbda7061f9edd5427849f8c22 516 PRINTS PR00762 Chloride channel signature 89 106 1.17E-26 T 26-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 smi_1061 b39c61bcbda7061f9edd5427849f8c22 516 PRINTS PR00762 Chloride channel signature 337 357 1.17E-26 T 26-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 smi_1061 b39c61bcbda7061f9edd5427849f8c22 516 PRINTS PR00762 Chloride channel signature 390 409 1.17E-26 T 26-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 smi_1061 b39c61bcbda7061f9edd5427849f8c22 516 Pfam PF02080 TrkA-C domain 450 515 3.9E-7 T 26-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 smi_1061 b39c61bcbda7061f9edd5427849f8c22 516 PANTHER PTHR11689 1 457 4.6E-84 T 26-04-2016 smi_1061 b39c61bcbda7061f9edd5427849f8c22 516 SUPERFAMILY SSF116726 443 514 1.7E-8 T 26-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 smi_1408 e43f655c1750126047d6cbf74cd8db8f 325 TIGRFAM TIGR00020 prfB: peptide chain release factor 2 1 323 3.5E-143 T 26-04-2016 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 smi_1408 e43f655c1750126047d6cbf74cd8db8f 325 SUPERFAMILY SSF75620 1 323 4.05E-126 T 26-04-2016 smi_1408 e43f655c1750126047d6cbf74cd8db8f 325 PANTHER PTHR11075 1 323 2.1E-146 T 26-04-2016 smi_1408 e43f655c1750126047d6cbf74cd8db8f 325 Gene3D G3DSA:1.20.58.410 1 73 5.2E-14 T 26-04-2016 smi_1408 e43f655c1750126047d6cbf74cd8db8f 325 Pfam PF03462 PCRF domain 1 178 8.7E-57 T 26-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 smi_1408 e43f655c1750126047d6cbf74cd8db8f 325 SMART SM00937 35 153 8.6E-51 T 26-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 smi_1408 e43f655c1750126047d6cbf74cd8db8f 325 PANTHER PTHR11075:SF6 1 323 2.1E-146 T 26-04-2016 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 smi_1408 e43f655c1750126047d6cbf74cd8db8f 325 Pfam PF00472 RF-1 domain 187 296 3.1E-38 T 26-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 smi_1408 e43f655c1750126047d6cbf74cd8db8f 325 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 203 219 - T 26-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 smi_1408 e43f655c1750126047d6cbf74cd8db8f 325 Gene3D G3DSA:3.30.160.20 186 264 2.2E-32 T 26-04-2016 IPR014720 Double-stranded RNA-binding domain smi_1026 cb5edfc6e08fa0a25d3e55d181770b85 141 TIGRFAM TIGR00689 rpiB_lacA_lacB: sugar-phosphate isomerase, RpiB/LacA/LacB family 3 139 2.0E-33 T 26-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 smi_1026 cb5edfc6e08fa0a25d3e55d181770b85 141 Gene3D G3DSA:3.40.1400.10 1 140 7.9E-42 T 26-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 smi_1026 cb5edfc6e08fa0a25d3e55d181770b85 141 Pfam PF02502 Ribose/Galactose Isomerase 3 137 1.9E-38 T 26-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 smi_1026 cb5edfc6e08fa0a25d3e55d181770b85 141 Hamap MF_01555 Galactose-6-phosphate isomerase subunit LacA [lacA]. 1 141 39.487 T 26-04-2016 IPR004783 Galactose-6-phosphate isomerase subunit LacA GO:0005990|GO:0050044 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 smi_1026 cb5edfc6e08fa0a25d3e55d181770b85 141 PANTHER PTHR30345 1 141 2.1E-107 T 26-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 smi_1026 cb5edfc6e08fa0a25d3e55d181770b85 141 PIRSF PIRSF005384 1 141 1.6E-40 T 26-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 smi_1026 cb5edfc6e08fa0a25d3e55d181770b85 141 SUPERFAMILY SSF89623 1 140 4.19E-44 T 26-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 smi_1026 cb5edfc6e08fa0a25d3e55d181770b85 141 PANTHER PTHR30345:SF5 1 141 2.1E-107 T 26-04-2016 smi_1026 cb5edfc6e08fa0a25d3e55d181770b85 141 TIGRFAM TIGR01118 lacA: galactose-6-phosphate isomerase, LacA subunit 1 140 3.6E-79 T 26-04-2016 IPR004783 Galactose-6-phosphate isomerase subunit LacA GO:0005990|GO:0050044 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 smi_0944 7f5615088327efb4b4d007cae8b76c82 346 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 5 21 3.9E-17 T 26-04-2016 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 smi_0944 7f5615088327efb4b4d007cae8b76c82 346 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 119 133 3.9E-17 T 26-04-2016 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 smi_0944 7f5615088327efb4b4d007cae8b76c82 346 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 165 178 3.9E-17 T 26-04-2016 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 smi_0944 7f5615088327efb4b4d007cae8b76c82 346 TIGRFAM TIGR00675 dcm: DNA (cytosine-5-)-methyltransferase 6 317 1.9E-82 T 26-04-2016 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 smi_0944 7f5615088327efb4b4d007cae8b76c82 346 Gene3D G3DSA:3.40.50.150 2 209 1.4E-61 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase smi_0944 7f5615088327efb4b4d007cae8b76c82 346 SUPERFAMILY SSF53335 4 319 1.41E-77 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase smi_0944 7f5615088327efb4b4d007cae8b76c82 346 PANTHER PTHR10629 1 337 6.5E-57 T 26-04-2016 smi_0944 7f5615088327efb4b4d007cae8b76c82 346 ProSitePatterns PS00094 C-5 cytosine-specific DNA methylases active site. 77 89 - T 26-04-2016 IPR018117 DNA methylase, C-5 cytosine-specific, active site KEGG: 00270+2.1.1.37 smi_0944 7f5615088327efb4b4d007cae8b76c82 346 ProSitePatterns PS00095 C-5 cytosine-specific DNA methylases C-terminal signature. 299 317 - T 26-04-2016 IPR031303 DNA methylase, C-5 cytosine-specific, conserved site KEGG: 00270+2.1.1.37 smi_0944 7f5615088327efb4b4d007cae8b76c82 346 Pfam PF00145 C-5 cytosine-specific DNA methylase 5 318 1.3E-73 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase smi_0944 7f5615088327efb4b4d007cae8b76c82 346 Gene3D G3DSA:3.90.120.10 210 305 1.0E-12 T 26-04-2016 smi_0544 d7e77aa3f2d52c93bc0bb570c1e8b60f 255 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 4 252 32.736 T 26-04-2016 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 smi_0544 d7e77aa3f2d52c93bc0bb570c1e8b60f 255 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 47 65 - T 26-04-2016 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 smi_0544 d7e77aa3f2d52c93bc0bb570c1e8b60f 255 Gene3D G3DSA:3.20.20.70 5 250 5.1E-89 T 26-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 smi_0544 d7e77aa3f2d52c93bc0bb570c1e8b60f 255 Pfam PF00218 Indole-3-glycerol phosphate synthase 8 250 2.5E-89 T 26-04-2016 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 smi_0544 d7e77aa3f2d52c93bc0bb570c1e8b60f 255 PANTHER PTHR22854:SF2 3 250 3.7E-97 T 26-04-2016 smi_0544 d7e77aa3f2d52c93bc0bb570c1e8b60f 255 PANTHER PTHR22854 3 250 3.7E-97 T 26-04-2016 smi_0544 d7e77aa3f2d52c93bc0bb570c1e8b60f 255 SUPERFAMILY SSF51366 7 251 1.18E-77 T 26-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 smi_1283 ae6abf9f49cbd68f461793196e127aa3 99 PANTHER PTHR33449:SF1 1 99 4.0E-36 T 26-04-2016 smi_1283 ae6abf9f49cbd68f461793196e127aa3 99 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 3 90 9.3E-23 T 26-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family smi_1283 ae6abf9f49cbd68f461793196e127aa3 99 PANTHER PTHR33449 1 99 4.0E-36 T 26-04-2016 smi_1283 ae6abf9f49cbd68f461793196e127aa3 99 SUPERFAMILY SSF82607 4 95 3.79E-27 T 26-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family smi_1283 ae6abf9f49cbd68f461793196e127aa3 99 Pfam PF02575 YbaB/EbfC DNA-binding family 8 97 5.3E-27 T 26-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family smi_1283 ae6abf9f49cbd68f461793196e127aa3 99 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 2 96 19.405 T 26-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family smi_1283 ae6abf9f49cbd68f461793196e127aa3 99 PIRSF PIRSF004555 1 99 8.7E-27 T 26-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family smi_1283 ae6abf9f49cbd68f461793196e127aa3 99 Gene3D G3DSA:3.30.1310.10 1 97 9.5E-30 T 26-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family smi_1649 80b3393bb8ffe4924522d34669982812 790 SUPERFAMILY SSF81886 576 789 3.27E-44 T 26-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 smi_1649 80b3393bb8ffe4924522d34669982812 790 Gene3D G3DSA:1.10.3060.10 602 773 1.3E-31 T 26-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 smi_1649 80b3393bb8ffe4924522d34669982812 790 SUPERFAMILY SSF52540 348 395 1.25E-67 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1649 80b3393bb8ffe4924522d34669982812 790 SUPERFAMILY SSF52540 7 226 1.25E-67 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1649 80b3393bb8ffe4924522d34669982812 790 SMART SM00958 226 338 2.8E-44 T 26-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 smi_1649 80b3393bb8ffe4924522d34669982812 790 Gene3D G3DSA:3.90.1440.10 230 347 6.3E-38 T 26-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 smi_1649 80b3393bb8ffe4924522d34669982812 790 SMART SM00957 2 382 2.4E-216 T 26-04-2016 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 smi_1649 80b3393bb8ffe4924522d34669982812 790 PANTHER PTHR30612 8 774 8.5E-240 T 26-04-2016 smi_1649 80b3393bb8ffe4924522d34669982812 790 SUPERFAMILY SSF81767 225 348 4.71E-38 T 26-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 smi_1649 80b3393bb8ffe4924522d34669982812 790 Pfam PF07516 SecA Wing and Scaffold domain 579 773 6.0E-31 T 26-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 smi_1649 80b3393bb8ffe4924522d34669982812 790 Pfam PF01043 SecA preprotein cross-linking domain 231 338 1.8E-27 T 26-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 smi_1649 80b3393bb8ffe4924522d34669982812 790 TIGRFAM TIGR03714 secA2: accessory Sec system translocase SecA2 7 765 0.0 T 26-04-2016 IPR022490 Protein translocase subunit SecA2 GO:0015031|GO:0015450 smi_1649 80b3393bb8ffe4924522d34669982812 790 Gene3D G3DSA:3.40.50.300 398 566 3.2E-61 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1649 80b3393bb8ffe4924522d34669982812 790 Hamap MF_01382 Protein translocase subunit SecA [secA]. 1 778 16.736 T 26-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 smi_1649 80b3393bb8ffe4924522d34669982812 790 PRINTS PR00906 SecA protein signature 393 406 2.7E-55 T 26-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 smi_1649 80b3393bb8ffe4924522d34669982812 790 PRINTS PR00906 SecA protein signature 356 373 2.7E-55 T 26-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 smi_1649 80b3393bb8ffe4924522d34669982812 790 PRINTS PR00906 SecA protein signature 94 108 2.7E-55 T 26-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 smi_1649 80b3393bb8ffe4924522d34669982812 790 PRINTS PR00906 SecA protein signature 319 341 2.7E-55 T 26-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 smi_1649 80b3393bb8ffe4924522d34669982812 790 PRINTS PR00906 SecA protein signature 168 188 2.7E-55 T 26-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 smi_1649 80b3393bb8ffe4924522d34669982812 790 PRINTS PR00906 SecA protein signature 110 120 2.7E-55 T 26-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 smi_1649 80b3393bb8ffe4924522d34669982812 790 PRINTS PR00906 SecA protein signature 56 80 2.7E-55 T 26-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 smi_1649 80b3393bb8ffe4924522d34669982812 790 Pfam PF07517 SecA DEAD-like domain 8 381 1.8E-109 T 26-04-2016 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 smi_1649 80b3393bb8ffe4924522d34669982812 790 SMART SM00487 70 259 0.0098 T 26-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain smi_1649 80b3393bb8ffe4924522d34669982812 790 SUPERFAMILY SSF52540 396 563 1.95E-43 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1649 80b3393bb8ffe4924522d34669982812 790 Gene3D G3DSA:3.40.50.300 7 226 7.0E-98 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1649 80b3393bb8ffe4924522d34669982812 790 Gene3D G3DSA:3.40.50.300 349 396 7.0E-98 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_2038 be7c1cb1a9660a8b3a4de920062dbe63 348 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 127 145 - T 26-04-2016 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 smi_2038 be7c1cb1a9660a8b3a4de920062dbe63 348 Pfam PF01207 Dihydrouridine synthase (Dus) 45 346 2.8E-90 T 26-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 smi_2038 be7c1cb1a9660a8b3a4de920062dbe63 348 Gene3D G3DSA:1.10.1200.80 284 347 1.1E-20 T 26-04-2016 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 smi_2038 be7c1cb1a9660a8b3a4de920062dbe63 348 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 35 347 7.7E-108 T 26-04-2016 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 smi_2038 be7c1cb1a9660a8b3a4de920062dbe63 348 Gene3D G3DSA:3.20.20.70 39 278 6.3E-83 T 26-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 smi_2038 be7c1cb1a9660a8b3a4de920062dbe63 348 PIRSF PIRSF006621 32 348 1.2E-101 T 26-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 smi_2038 be7c1cb1a9660a8b3a4de920062dbe63 348 PANTHER PTHR11082:SF25 26 347 4.2E-141 T 26-04-2016 smi_2038 be7c1cb1a9660a8b3a4de920062dbe63 348 SUPERFAMILY SSF51395 42 346 1.76E-85 T 26-04-2016 smi_2038 be7c1cb1a9660a8b3a4de920062dbe63 348 PANTHER PTHR11082 26 347 4.2E-141 T 26-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 smi_1094 367825733baa40537a20476c7889dd29 316 Gene3D G3DSA:1.10.10.10 2 44 5.9E-5 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain smi_1094 367825733baa40537a20476c7889dd29 316 Pfam PF13280 WYL domain 142 311 1.8E-25 T 26-04-2016 IPR026881 WYL domain smi_1094 367825733baa40537a20476c7889dd29 316 PANTHER PTHR34580 5 315 2.1E-20 T 26-04-2016 smi_0969 a1c121b770dbe6c57495935cfe5d16c2 131 Pfam PF01219 Prokaryotic diacylglycerol kinase 21 122 2.6E-33 T 26-04-2016 IPR000829 Diacylglycerol kinase, prokaryotic GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039 smi_0969 a1c121b770dbe6c57495935cfe5d16c2 131 ProSitePatterns PS01069 Prokaryotic diacylglycerol kinase signature. 74 85 - T 26-04-2016 IPR000829 Diacylglycerol kinase, prokaryotic GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039 smi_0969 a1c121b770dbe6c57495935cfe5d16c2 131 PANTHER PTHR34299 1 131 8.3E-36 T 26-04-2016 smi_0969 a1c121b770dbe6c57495935cfe5d16c2 131 Gene3D G3DSA:1.10.3830.10 7 127 8.2E-43 T 26-04-2016 smi_0969 a1c121b770dbe6c57495935cfe5d16c2 131 PANTHER PTHR34299:SF1 1 131 8.3E-36 T 26-04-2016 smi_1090 4bd651cbceb1fa980dbcf81530e37085 1297 SUPERFAMILY SSF52980 1017 1223 3.32E-14 T 26-04-2016 IPR011335 Restriction endonuclease type II-like smi_1090 4bd651cbceb1fa980dbcf81530e37085 1297 Gene3D G3DSA:3.40.50.300 200 304 1.3E-55 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1090 4bd651cbceb1fa980dbcf81530e37085 1297 Gene3D G3DSA:3.40.50.300 1 122 1.3E-55 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1090 4bd651cbceb1fa980dbcf81530e37085 1297 Pfam PF12705 PD-(D/E)XK nuclease superfamily 708 986 4.0E-25 T 26-04-2016 smi_1090 4bd651cbceb1fa980dbcf81530e37085 1297 Pfam PF12705 PD-(D/E)XK nuclease superfamily 1017 1278 8.0E-26 T 26-04-2016 smi_1090 4bd651cbceb1fa980dbcf81530e37085 1297 SUPERFAMILY SSF52980 710 905 7.51E-5 T 26-04-2016 IPR011335 Restriction endonuclease type II-like smi_1090 4bd651cbceb1fa980dbcf81530e37085 1297 Gene3D G3DSA:3.90.320.10 1012 1135 3.0E-4 T 26-04-2016 IPR011604 Exonuclease, phage-type/RecB, C-terminal GO:0003677|GO:0004518 smi_1090 4bd651cbceb1fa980dbcf81530e37085 1297 SUPERFAMILY SSF52540 2 143 4.81E-102 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1090 4bd651cbceb1fa980dbcf81530e37085 1297 SUPERFAMILY SSF52540 190 660 4.81E-102 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1090 4bd651cbceb1fa980dbcf81530e37085 1297 Pfam PF13361 UvrD-like helicase C-terminal domain 305 656 2.7E-35 T 26-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 smi_1090 4bd651cbceb1fa980dbcf81530e37085 1297 Pfam PF00580 UvrD/REP helicase N-terminal domain 1 301 3.8E-52 T 26-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 smi_1090 4bd651cbceb1fa980dbcf81530e37085 1297 PANTHER PTHR11070 1 150 1.4E-97 T 26-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 smi_1090 4bd651cbceb1fa980dbcf81530e37085 1297 PANTHER PTHR11070 632 678 1.4E-97 T 26-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 smi_1090 4bd651cbceb1fa980dbcf81530e37085 1297 PANTHER PTHR11070 167 612 1.4E-97 T 26-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 smi_1090 4bd651cbceb1fa980dbcf81530e37085 1297 Gene3D G3DSA:3.40.50.300 309 423 4.0E-44 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1090 4bd651cbceb1fa980dbcf81530e37085 1297 Gene3D G3DSA:3.40.50.300 572 675 4.0E-44 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1238 58e04268202f10a0d501b822978dfa8d 180 PANTHER PTHR41303 2 180 2.3E-64 T 26-04-2016 smi_1238 58e04268202f10a0d501b822978dfa8d 180 Pfam PF02620 Uncharacterized ACR, COG1399 55 175 5.5E-20 T 26-04-2016 IPR003772 Protein of unknown function DUF177 smi_1238 58e04268202f10a0d501b822978dfa8d 180 PANTHER PTHR41303:SF1 2 180 2.3E-64 T 26-04-2016 smi_0890 22c534c32748e7279407b9905ba86700 220 Pfam PF01791 DeoC/LacD family aldolase 5 212 8.9E-18 T 26-04-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 smi_0890 22c534c32748e7279407b9905ba86700 220 TIGRFAM TIGR00126 deoC: deoxyribose-phosphate aldolase 3 211 2.3E-91 T 26-04-2016 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|UniPathway: UPA00002 smi_0890 22c534c32748e7279407b9905ba86700 220 SMART SM01133 2 213 1.2E-101 T 26-04-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 smi_0890 22c534c32748e7279407b9905ba86700 220 Gene3D G3DSA:3.20.20.70 1 214 6.9E-94 T 26-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 smi_0890 22c534c32748e7279407b9905ba86700 220 PANTHER PTHR10889 1 220 6.5E-113 T 26-04-2016 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|UniPathway: UPA00002 smi_0890 22c534c32748e7279407b9905ba86700 220 Hamap MF_00114 Deoxyribose-phosphate aldolase [deoC]. 1 215 38.407 T 26-04-2016 IPR028581 Deoxyribose-phosphate aldolase type I GO:0004139 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|UniPathway: UPA00002 smi_0890 22c534c32748e7279407b9905ba86700 220 PIRSF PIRSF001357 1 219 1.1E-78 T 26-04-2016 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|UniPathway: UPA00002 smi_0890 22c534c32748e7279407b9905ba86700 220 SUPERFAMILY SSF51569 1 213 7.85E-86 T 26-04-2016 smi_1256 ab9c1e0d441920c0500738bfac77eb26 268 PANTHER PTHR10000 1 268 5.2E-112 T 26-04-2016 smi_1256 ab9c1e0d441920c0500738bfac77eb26 268 PANTHER PTHR10000:SF16 1 268 5.2E-112 T 26-04-2016 smi_1256 ab9c1e0d441920c0500738bfac77eb26 268 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 263 4.3E-69 T 26-04-2016 IPR023214 HAD-like domain smi_1256 ab9c1e0d441920c0500738bfac77eb26 268 Gene3D G3DSA:3.40.50.1000 183 268 6.4E-58 T 26-04-2016 IPR023214 HAD-like domain smi_1256 ab9c1e0d441920c0500738bfac77eb26 268 Gene3D G3DSA:3.40.50.1000 1 76 6.4E-58 T 26-04-2016 IPR023214 HAD-like domain smi_1256 ab9c1e0d441920c0500738bfac77eb26 268 SUPERFAMILY SSF56784 1 267 1.3E-77 T 26-04-2016 IPR023214 HAD-like domain smi_1256 ab9c1e0d441920c0500738bfac77eb26 268 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 236 1.3E-33 T 26-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 smi_1256 ab9c1e0d441920c0500738bfac77eb26 268 Gene3D G3DSA:3.30.1240.10 87 182 2.0E-43 T 26-04-2016 smi_1256 ab9c1e0d441920c0500738bfac77eb26 268 ProSitePatterns PS01228 Hypothetical cof family signature 1. 5 16 - T 26-04-2016 IPR000150 Cof protein GO:0016787 smi_1256 ab9c1e0d441920c0500738bfac77eb26 268 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 263 4.6E-65 T 26-04-2016 IPR000150 Cof protein GO:0016787 smi_1223 c12e25910e4c0090a2b82547cee92fed 282 Pfam PF02481 DNA recombination-mediator protein A 75 271 3.8E-74 T 26-04-2016 IPR003488 DNA recombination-mediator protein A GO:0009294 smi_1223 c12e25910e4c0090a2b82547cee92fed 282 SUPERFAMILY SSF102405 77 280 5.04E-38 T 26-04-2016 smi_1223 c12e25910e4c0090a2b82547cee92fed 282 PANTHER PTHR32039:SF8 3 281 3.9E-94 T 26-04-2016 smi_1223 c12e25910e4c0090a2b82547cee92fed 282 PANTHER PTHR32039 3 281 3.9E-94 T 26-04-2016 smi_1223 c12e25910e4c0090a2b82547cee92fed 282 Gene3D G3DSA:3.40.50.450 105 266 4.2E-11 T 26-04-2016 smi_1223 c12e25910e4c0090a2b82547cee92fed 282 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 77 279 9.0E-72 T 26-04-2016 IPR003488 DNA recombination-mediator protein A GO:0009294 smi_1069 ffd6d1887c5cc9544bf24b9753b33048 269 Gene3D G3DSA:3.30.1240.10 87 182 1.2E-15 T 26-04-2016 smi_1069 ffd6d1887c5cc9544bf24b9753b33048 269 PANTHER PTHR10000 1 269 2.5E-109 T 26-04-2016 smi_1069 ffd6d1887c5cc9544bf24b9753b33048 269 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 4 237 9.3E-23 T 26-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 smi_1069 ffd6d1887c5cc9544bf24b9753b33048 269 Pfam PF08282 haloacid dehalogenase-like hydrolase 5 264 2.0E-66 T 26-04-2016 IPR023214 HAD-like domain smi_1069 ffd6d1887c5cc9544bf24b9753b33048 269 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 4 264 7.5E-59 T 26-04-2016 IPR000150 Cof protein GO:0016787 smi_1069 ffd6d1887c5cc9544bf24b9753b33048 269 PANTHER PTHR10000:SF16 1 269 2.5E-109 T 26-04-2016 smi_1069 ffd6d1887c5cc9544bf24b9753b33048 269 Gene3D G3DSA:3.40.50.1000 1 75 2.2E-57 T 26-04-2016 IPR023214 HAD-like domain smi_1069 ffd6d1887c5cc9544bf24b9753b33048 269 Gene3D G3DSA:3.40.50.1000 183 269 2.2E-57 T 26-04-2016 IPR023214 HAD-like domain smi_1069 ffd6d1887c5cc9544bf24b9753b33048 269 ProSitePatterns PS01229 Hypothetical cof family signature 2. 218 240 - T 26-04-2016 smi_1069 ffd6d1887c5cc9544bf24b9753b33048 269 SUPERFAMILY SSF56784 1 268 5.04E-70 T 26-04-2016 IPR023214 HAD-like domain smi_1069 ffd6d1887c5cc9544bf24b9753b33048 269 ProSitePatterns PS01228 Hypothetical cof family signature 1. 4 15 - T 26-04-2016 IPR000150 Cof protein GO:0016787 smi_0620 868ac43ab98c3cc3a6aea7ab6398de44 457 Hamap MF_02033 Cell division protein FtsA [ftsA]. 3 455 27.92 T 26-04-2016 IPR020823 Cell division protein FtsA GO:0007049 smi_0620 868ac43ab98c3cc3a6aea7ab6398de44 457 PANTHER PTHR32432:SF4 1 440 1.6E-163 T 26-04-2016 smi_0620 868ac43ab98c3cc3a6aea7ab6398de44 457 Gene3D G3DSA:3.90.640.10 233 294 1.1E-21 T 26-04-2016 smi_0620 868ac43ab98c3cc3a6aea7ab6398de44 457 Gene3D G3DSA:3.30.420.40 1 138 1.2E-52 T 26-04-2016 smi_0620 868ac43ab98c3cc3a6aea7ab6398de44 457 Pfam PF02491 SHS2 domain inserted in FTSA 82 159 3.1E-22 T 26-04-2016 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 smi_0620 868ac43ab98c3cc3a6aea7ab6398de44 457 PIRSF PIRSF003101 1 455 3.0E-126 T 26-04-2016 IPR020823 Cell division protein FtsA GO:0007049 smi_0620 868ac43ab98c3cc3a6aea7ab6398de44 457 SUPERFAMILY SSF53067 197 364 6.4E-36 T 26-04-2016 smi_0620 868ac43ab98c3cc3a6aea7ab6398de44 457 SUPERFAMILY SSF53067 6 195 1.76E-57 T 26-04-2016 smi_0620 868ac43ab98c3cc3a6aea7ab6398de44 457 Pfam PF14450 Cell division protein FtsA 206 364 9.9E-18 T 26-04-2016 smi_0620 868ac43ab98c3cc3a6aea7ab6398de44 457 SMART SM00842 7 194 5.7E-88 T 26-04-2016 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 smi_0620 868ac43ab98c3cc3a6aea7ab6398de44 457 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 7 366 3.6E-100 T 26-04-2016 IPR020823 Cell division protein FtsA GO:0007049 smi_0620 868ac43ab98c3cc3a6aea7ab6398de44 457 PANTHER PTHR32432 1 440 1.6E-163 T 26-04-2016 smi_0620 868ac43ab98c3cc3a6aea7ab6398de44 457 Gene3D G3DSA:3.30.420.40 295 346 5.4E-17 T 26-04-2016 smi_0620 868ac43ab98c3cc3a6aea7ab6398de44 457 Gene3D G3DSA:3.30.420.40 195 232 5.4E-17 T 26-04-2016 smi_0620 868ac43ab98c3cc3a6aea7ab6398de44 457 Pfam PF11983 Membrane-attachment and polymerisation-promoting switch 376 456 6.2E-17 T 26-04-2016 IPR021873 Cell division protein FtsA, C-terminal smi_1887 a635752e5ad334b072b0b570d24c0fa2 60 PANTHER PTHR15892 1 60 5.2E-26 T 26-04-2016 smi_1887 a635752e5ad334b072b0b570d24c0fa2 60 PIRSF PIRSF002211 1 60 1.2E-27 T 26-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 smi_1887 a635752e5ad334b072b0b570d24c0fa2 60 Gene3D G3DSA:3.30.1390.20 1 59 1.8E-29 T 26-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain smi_1887 a635752e5ad334b072b0b570d24c0fa2 60 SUPERFAMILY SSF55129 1 60 4.19E-20 T 26-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain smi_1887 a635752e5ad334b072b0b570d24c0fa2 60 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 1 58 18.829 T 26-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 smi_1887 a635752e5ad334b072b0b570d24c0fa2 60 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 4 58 1.4E-26 T 26-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 smi_1887 a635752e5ad334b072b0b570d24c0fa2 60 Pfam PF00327 Ribosomal protein L30p/L7e 4 54 1.7E-18 T 26-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain smi_1887 a635752e5ad334b072b0b570d24c0fa2 60 ProSitePatterns PS00634 Ribosomal protein L30 signature. 22 54 - T 26-04-2016 IPR018038 Ribosomal protein L30, conserved site smi_0543 a83aca7336541df12baf6d2c94fb9cc0 334 SUPERFAMILY SSF47648 1 67 1.13E-16 T 26-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain smi_0543 a83aca7336541df12baf6d2c94fb9cc0 334 PANTHER PTHR11922:SF5 62 332 3.0E-110 T 26-04-2016 smi_0543 a83aca7336541df12baf6d2c94fb9cc0 334 PANTHER PTHR11922:SF5 1 14 3.0E-110 T 26-04-2016 smi_0543 a83aca7336541df12baf6d2c94fb9cc0 334 Gene3D G3DSA:1.20.970.10 2 68 1.1E-23 T 26-04-2016 smi_0543 a83aca7336541df12baf6d2c94fb9cc0 334 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 3 332 35.825 T 26-04-2016 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18|UniPathway: UPA00035 smi_0543 a83aca7336541df12baf6d2c94fb9cc0 334 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 5 330 5.8E-112 T 26-04-2016 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18|UniPathway: UPA00035 smi_0543 a83aca7336541df12baf6d2c94fb9cc0 334 PANTHER PTHR11922 62 332 3.0E-110 T 26-04-2016 smi_0543 a83aca7336541df12baf6d2c94fb9cc0 334 PANTHER PTHR11922 1 14 3.0E-110 T 26-04-2016 smi_0543 a83aca7336541df12baf6d2c94fb9cc0 334 Gene3D G3DSA:3.40.1030.10 73 333 6.4E-100 T 26-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 smi_0543 a83aca7336541df12baf6d2c94fb9cc0 334 SUPERFAMILY SSF52418 73 333 6.8E-88 T 26-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 smi_0543 a83aca7336541df12baf6d2c94fb9cc0 334 Pfam PF00591 Glycosyl transferase family, a/b domain 73 323 1.7E-91 T 26-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 smi_0543 a83aca7336541df12baf6d2c94fb9cc0 334 Pfam PF02885 Glycosyl transferase family, helical bundle domain 2 64 3.0E-17 T 26-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain smi_0860 651f1bb53200cf2419fb325aa966639a 648 Pfam PF01751 Toprim domain 428 539 1.1E-17 T 26-04-2016 IPR006171 Toprim domain smi_0860 651f1bb53200cf2419fb325aa966639a 648 SMART SM00433 42 642 0.0 T 26-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 smi_0860 651f1bb53200cf2419fb325aa966639a 648 SMART SM00387 38 182 2.6E-22 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain smi_0860 651f1bb53200cf2419fb325aa966639a 648 PRINTS PR00418 DNA topoisomerase II family signature 42 57 3.2E-68 T 26-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 smi_0860 651f1bb53200cf2419fb325aa966639a 648 PRINTS PR00418 DNA topoisomerase II family signature 77 90 3.2E-68 T 26-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 smi_0860 651f1bb53200cf2419fb325aa966639a 648 PRINTS PR00418 DNA topoisomerase II family signature 581 597 3.2E-68 T 26-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 smi_0860 651f1bb53200cf2419fb325aa966639a 648 PRINTS PR00418 DNA topoisomerase II family signature 120 134 3.2E-68 T 26-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 smi_0860 651f1bb53200cf2419fb325aa966639a 648 PRINTS PR00418 DNA topoisomerase II family signature 513 530 3.2E-68 T 26-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 smi_0860 651f1bb53200cf2419fb325aa966639a 648 PRINTS PR00418 DNA topoisomerase II family signature 495 511 3.2E-68 T 26-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 smi_0860 651f1bb53200cf2419fb325aa966639a 648 PRINTS PR00418 DNA topoisomerase II family signature 429 443 3.2E-68 T 26-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 smi_0860 651f1bb53200cf2419fb325aa966639a 648 PRINTS PR00418 DNA topoisomerase II family signature 277 290 3.2E-68 T 26-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 smi_0860 651f1bb53200cf2419fb325aa966639a 648 PRINTS PR00418 DNA topoisomerase II family signature 533 545 3.2E-68 T 26-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 smi_0860 651f1bb53200cf2419fb325aa966639a 648 SUPERFAMILY SSF55874 13 225 1.15E-73 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain smi_0860 651f1bb53200cf2419fb325aa966639a 648 Gene3D G3DSA:3.30.565.10 13 225 3.7E-92 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain smi_0860 651f1bb53200cf2419fb325aa966639a 648 PRINTS PR01159 DNA gyrase subunit B signature 618 634 4.4E-77 T 26-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 smi_0860 651f1bb53200cf2419fb325aa966639a 648 PRINTS PR01159 DNA gyrase subunit B signature 229 251 4.4E-77 T 26-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 smi_0860 651f1bb53200cf2419fb325aa966639a 648 PRINTS PR01159 DNA gyrase subunit B signature 479 488 4.4E-77 T 26-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 smi_0860 651f1bb53200cf2419fb325aa966639a 648 PRINTS PR01159 DNA gyrase subunit B signature 602 614 4.4E-77 T 26-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 smi_0860 651f1bb53200cf2419fb325aa966639a 648 PRINTS PR01159 DNA gyrase subunit B signature 383 403 4.4E-77 T 26-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 smi_0860 651f1bb53200cf2419fb325aa966639a 648 PRINTS PR01159 DNA gyrase subunit B signature 188 203 4.4E-77 T 26-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 smi_0860 651f1bb53200cf2419fb325aa966639a 648 PRINTS PR01159 DNA gyrase subunit B signature 321 337 4.4E-77 T 26-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 smi_0860 651f1bb53200cf2419fb325aa966639a 648 PRINTS PR01159 DNA gyrase subunit B signature 203 216 4.4E-77 T 26-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 smi_0860 651f1bb53200cf2419fb325aa966639a 648 PRINTS PR01159 DNA gyrase subunit B signature 13 23 4.4E-77 T 26-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 smi_0860 651f1bb53200cf2419fb325aa966639a 648 PRINTS PR01159 DNA gyrase subunit B signature 369 383 4.4E-77 T 26-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 smi_0860 651f1bb53200cf2419fb325aa966639a 648 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 13 646 6.9E-298 T 26-04-2016 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 smi_0860 651f1bb53200cf2419fb325aa966639a 648 Gene3D G3DSA:3.30.230.10 229 401 2.4E-76 T 26-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup smi_0860 651f1bb53200cf2419fb325aa966639a 648 Pfam PF00204 DNA gyrase B 230 399 2.9E-67 T 26-04-2016 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 smi_0860 651f1bb53200cf2419fb325aa966639a 648 PANTHER PTHR10169 11 641 0.0 T 26-04-2016 smi_0860 651f1bb53200cf2419fb325aa966639a 648 ProSitePatterns PS00177 DNA topoisomerase II signature. 431 439 - T 26-04-2016 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 smi_0860 651f1bb53200cf2419fb325aa966639a 648 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 40 181 1.3E-22 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain smi_0860 651f1bb53200cf2419fb325aa966639a 648 SUPERFAMILY SSF54211 230 400 1.4E-64 T 26-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold smi_0860 651f1bb53200cf2419fb325aa966639a 648 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 10 648 89.237 T 26-04-2016 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 smi_0860 651f1bb53200cf2419fb325aa966639a 648 SUPERFAMILY SSF56719 403 640 2.01E-84 T 26-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 smi_0860 651f1bb53200cf2419fb325aa966639a 648 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 577 638 2.2E-29 T 26-04-2016 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 smi_0860 651f1bb53200cf2419fb325aa966639a 648 Gene3D G3DSA:3.40.50.670 413 631 2.8E-89 T 26-04-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 smi_2077 964947972eac5406a2532c362db83ebf 540 PANTHER PTHR19211 1 527 0.0 T 26-04-2016 smi_2077 964947972eac5406a2532c362db83ebf 540 Pfam PF00005 ABC transporter 18 184 2.8E-24 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 smi_2077 964947972eac5406a2532c362db83ebf 540 Pfam PF00005 ABC transporter 335 467 8.3E-14 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 smi_2077 964947972eac5406a2532c362db83ebf 540 Gene3D G3DSA:3.40.50.300 317 533 6.5E-35 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_2077 964947972eac5406a2532c362db83ebf 540 SUPERFAMILY SSF52540 7 237 6.14E-47 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_2077 964947972eac5406a2532c362db83ebf 540 PANTHER PTHR19211:SF38 1 527 0.0 T 26-04-2016 smi_2077 964947972eac5406a2532c362db83ebf 540 Gene3D G3DSA:3.40.50.300 132 280 4.3E-51 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_2077 964947972eac5406a2532c362db83ebf 540 Gene3D G3DSA:3.40.50.300 3 100 4.3E-51 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_2077 964947972eac5406a2532c362db83ebf 540 SUPERFAMILY SSF52540 293 514 9.41E-37 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_2077 964947972eac5406a2532c362db83ebf 540 Pfam PF12848 ABC transporter 224 305 3.1E-20 T 26-04-2016 IPR032781 ABC-transporter extension domain smi_2077 964947972eac5406a2532c362db83ebf 540 ProSitePatterns PS00211 ABC transporters family signature. 439 453 - T 26-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 smi_2077 964947972eac5406a2532c362db83ebf 540 SMART SM00382 344 512 0.32 T 26-04-2016 IPR003593 AAA+ ATPase domain smi_2077 964947972eac5406a2532c362db83ebf 540 SMART SM00382 26 228 2.5E-12 T 26-04-2016 IPR003593 AAA+ ATPase domain smi_1991 418c3b73c3d55cd9d3e730547e8a89d8 100 Pfam PF08951 Enterocin A Immunity 23 90 1.6E-6 T 26-04-2016 IPR015046 Enterocin A Immunity smi_0065 cae2439bee8c249e9c58cfc17083b1c1 449 TIGRFAM TIGR01000 bacteriocin_acc: bacteriocin secretion accessory protein 1 449 8.0E-170 T 26-04-2016 IPR005696 Mesentericin y105 secretion protein GO:0005215|GO:0006810 smi_0065 cae2439bee8c249e9c58cfc17083b1c1 449 Pfam PF13437 HlyD family secretion protein 310 423 6.0E-13 T 26-04-2016 smi_0194 b5b0b114a6918f607afe67d90424740a 426 Pfam PF01554 MatE 14 172 4.4E-26 T 26-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 smi_0194 b5b0b114a6918f607afe67d90424740a 426 Pfam PF01554 MatE 226 387 3.4E-21 T 26-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 smi_0194 b5b0b114a6918f607afe67d90424740a 426 PIRSF PIRSF006603 4 425 5.3E-73 T 26-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 smi_0194 b5b0b114a6918f607afe67d90424740a 426 TIGRFAM TIGR00797 matE: MATE efflux family protein 14 400 2.0E-58 T 26-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 smi_0194 b5b0b114a6918f607afe67d90424740a 426 PANTHER PTHR11206 6 420 2.2E-76 T 26-04-2016 smi_0194 b5b0b114a6918f607afe67d90424740a 426 PANTHER PTHR11206:SF95 6 420 2.2E-76 T 26-04-2016 smi_0882 6491e1008ef8cc5dfbfe74e33e7c3b5e 83 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 6 83 15.653 T 26-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_0882 6491e1008ef8cc5dfbfe74e33e7c3b5e 83 TIGRFAM TIGR00029 S20: ribosomal protein bS20 6 83 1.0E-19 T 26-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_0882 6491e1008ef8cc5dfbfe74e33e7c3b5e 83 Gene3D G3DSA:1.20.58.110 6 83 1.3E-22 T 26-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_0882 6491e1008ef8cc5dfbfe74e33e7c3b5e 83 Pfam PF01649 Ribosomal protein S20 7 81 8.2E-21 T 26-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_0882 6491e1008ef8cc5dfbfe74e33e7c3b5e 83 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 19 81 3.0E-23 T 26-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_0882 6491e1008ef8cc5dfbfe74e33e7c3b5e 83 SUPERFAMILY SSF46992 8 82 6.93E-23 T 26-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_0882 6491e1008ef8cc5dfbfe74e33e7c3b5e 83 PANTHER PTHR33398 7 83 4.7E-27 T 26-04-2016 smi_1209 584eea5d2c89ced9f115c4c3c2e71a3d 1179 TIGRFAM TIGR02168 SMC_prok_B: chromosome segregation protein SMC 2 1171 0.0 T 26-04-2016 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 smi_1209 584eea5d2c89ced9f115c4c3c2e71a3d 1179 PANTHER PTHR18937 1 485 0.0 T 26-04-2016 smi_1209 584eea5d2c89ced9f115c4c3c2e71a3d 1179 PANTHER PTHR18937 509 1177 0.0 T 26-04-2016 smi_1209 584eea5d2c89ced9f115c4c3c2e71a3d 1179 Pfam PF06470 SMC proteins Flexible Hinge Domain 519 635 1.3E-24 T 26-04-2016 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 smi_1209 584eea5d2c89ced9f115c4c3c2e71a3d 1179 PIRSF PIRSF005719 1 1177 8.4E-282 T 26-04-2016 IPR024704 Structural maintenance of chromosomes protein smi_1209 584eea5d2c89ced9f115c4c3c2e71a3d 1179 Gene3D G3DSA:3.40.50.300 1 184 3.9E-63 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1209 584eea5d2c89ced9f115c4c3c2e71a3d 1179 Gene3D G3DSA:3.40.50.300 1064 1174 3.9E-63 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1209 584eea5d2c89ced9f115c4c3c2e71a3d 1179 Gene3D G3DSA:3.40.50.300 262 263 3.9E-63 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1209 584eea5d2c89ced9f115c4c3c2e71a3d 1179 SUPERFAMILY SSF52540 973 1172 1.2E-26 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1209 584eea5d2c89ced9f115c4c3c2e71a3d 1179 SUPERFAMILY SSF52540 750 806 1.2E-26 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1209 584eea5d2c89ced9f115c4c3c2e71a3d 1179 SMART SM00968 518 637 3.5E-38 T 26-04-2016 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 smi_1209 584eea5d2c89ced9f115c4c3c2e71a3d 1179 SUPERFAMILY SSF75553 482 684 8.63E-50 T 26-04-2016 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 smi_1209 584eea5d2c89ced9f115c4c3c2e71a3d 1179 Pfam PF02463 RecF/RecN/SMC N terminal domain 2 1164 2.3E-55 T 26-04-2016 IPR003395 RecF/RecN/SMC, N-terminal smi_1209 584eea5d2c89ced9f115c4c3c2e71a3d 1179 Hamap MF_01894 Chromosome partition protein Smc [smc]. 1 1173 23.442 T 26-04-2016 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 smi_1209 584eea5d2c89ced9f115c4c3c2e71a3d 1179 SUPERFAMILY SSF52540 1 216 8.04E-53 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1209 584eea5d2c89ced9f115c4c3c2e71a3d 1179 SUPERFAMILY SSF52540 1070 1156 8.04E-53 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1209 584eea5d2c89ced9f115c4c3c2e71a3d 1179 PANTHER PTHR18937:SF251 1 485 0.0 T 26-04-2016 smi_1209 584eea5d2c89ced9f115c4c3c2e71a3d 1179 PANTHER PTHR18937:SF251 509 1177 0.0 T 26-04-2016 smi_1075 c6ae2fbe159c57946bcc6831c22b30f2 662 PANTHER PTHR30489 6 662 1.6E-139 T 26-04-2016 smi_1075 c6ae2fbe159c57946bcc6831c22b30f2 662 Pfam PF02687 FtsX-like permease family 62 181 5.9E-12 T 26-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 smi_1075 c6ae2fbe159c57946bcc6831c22b30f2 662 PANTHER PTHR30489:SF14 6 662 1.6E-139 T 26-04-2016 smi_1075 c6ae2fbe159c57946bcc6831c22b30f2 662 PIRSF PIRSF018968 4 662 2.9E-80 T 26-04-2016 IPR027022 ABC transporter permease protein, BceB-type GO:0006810 smi_1590 740458f6e053dcf7ac2c8fb655bad8ff 240 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 15 114 7.5E-25 T 26-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 smi_1590 740458f6e053dcf7ac2c8fb655bad8ff 240 Gene3D G3DSA:1.10.3720.10 14 134 1.4E-21 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 smi_1590 740458f6e053dcf7ac2c8fb655bad8ff 240 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 38 134 3.6E-9 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 smi_1590 740458f6e053dcf7ac2c8fb655bad8ff 240 PANTHER PTHR30614 7 135 8.1E-38 T 26-04-2016 smi_1590 740458f6e053dcf7ac2c8fb655bad8ff 240 SUPERFAMILY SSF161098 15 134 5.1E-24 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 smi_1106 87c83266f2a1c6cd120d420b7f0cd1e9 284 Pfam PF03747 ADP-ribosylglycohydrolase 1 256 8.2E-30 T 26-04-2016 IPR005502 ADP-ribosylation/Crystallin J1 smi_1106 87c83266f2a1c6cd120d420b7f0cd1e9 284 PANTHER PTHR16222:SF12 1 254 7.2E-39 T 26-04-2016 smi_1106 87c83266f2a1c6cd120d420b7f0cd1e9 284 PANTHER PTHR16222 1 254 7.2E-39 T 26-04-2016 smi_1106 87c83266f2a1c6cd120d420b7f0cd1e9 284 SUPERFAMILY SSF101478 1 257 2.88E-52 T 26-04-2016 IPR005502 ADP-ribosylation/Crystallin J1 smi_1215 7d290be41b2904af2361ddb1c006be17 460 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 2 457 55.226 T 26-04-2016 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 smi_1215 7d290be41b2904af2361ddb1c006be17 460 SUPERFAMILY SSF53732 3 456 2.62E-153 T 26-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 smi_1215 7d290be41b2904af2361ddb1c006be17 460 Gene3D G3DSA:3.30.499.10 308 456 2.7E-55 T 26-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 smi_1215 7d290be41b2904af2361ddb1c006be17 460 Gene3D G3DSA:3.30.499.10 9 164 9.1E-21 T 26-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 smi_1215 7d290be41b2904af2361ddb1c006be17 460 ProSitePatterns PS01244 Aconitase family signature 2. 390 403 - T 26-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 smi_1215 7d290be41b2904af2361ddb1c006be17 460 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 4 456 2.0E-199 T 26-04-2016 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 smi_1215 7d290be41b2904af2361ddb1c006be17 460 PRINTS PR00415 Aconitase family signature 108 116 5.3E-44 T 26-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 smi_1215 7d290be41b2904af2361ddb1c006be17 460 PRINTS PR00415 Aconitase family signature 390 403 5.3E-44 T 26-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 smi_1215 7d290be41b2904af2361ddb1c006be17 460 PRINTS PR00415 Aconitase family signature 209 222 5.3E-44 T 26-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 smi_1215 7d290be41b2904af2361ddb1c006be17 460 PRINTS PR00415 Aconitase family signature 119 132 5.3E-44 T 26-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 smi_1215 7d290be41b2904af2361ddb1c006be17 460 PRINTS PR00415 Aconitase family signature 82 95 5.3E-44 T 26-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 smi_1215 7d290be41b2904af2361ddb1c006be17 460 PRINTS PR00415 Aconitase family signature 195 208 5.3E-44 T 26-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 smi_1215 7d290be41b2904af2361ddb1c006be17 460 PRINTS PR00415 Aconitase family signature 133 148 5.3E-44 T 26-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 smi_1215 7d290be41b2904af2361ddb1c006be17 460 PRINTS PR00415 Aconitase family signature 334 345 5.3E-44 T 26-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 smi_1215 7d290be41b2904af2361ddb1c006be17 460 PRINTS PR00415 Aconitase family signature 284 298 5.3E-44 T 26-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 smi_1215 7d290be41b2904af2361ddb1c006be17 460 Gene3D G3DSA:3.40.1060.10 167 279 3.8E-36 T 26-04-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 smi_1215 7d290be41b2904af2361ddb1c006be17 460 Pfam PF00330 Aconitase family (aconitate hydratase) 8 448 7.8E-139 T 26-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 smi_1215 7d290be41b2904af2361ddb1c006be17 460 PANTHER PTHR11670 1 460 6.7E-218 T 26-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 smi_1215 7d290be41b2904af2361ddb1c006be17 460 ProSitePatterns PS00450 Aconitase family signature 1. 330 346 - T 26-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 smi_1215 7d290be41b2904af2361ddb1c006be17 460 PANTHER PTHR11670:SF12 1 460 6.7E-218 T 26-04-2016 smi_1156 ad052b2c3991e31212f0bac6be9949be 183 PANTHER PTHR13256:SF31 1 183 2.1E-122 T 26-04-2016 smi_1156 ad052b2c3991e31212f0bac6be9949be 183 Gene3D G3DSA:3.40.630.30 9 180 2.4E-41 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase smi_1156 ad052b2c3991e31212f0bac6be9949be 183 Pfam PF13302 Acetyltransferase (GNAT) domain 17 153 1.3E-29 T 26-04-2016 IPR000182 GNAT domain GO:0008080 smi_1156 ad052b2c3991e31212f0bac6be9949be 183 SUPERFAMILY SSF55729 9 175 1.56E-38 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase smi_1156 ad052b2c3991e31212f0bac6be9949be 183 PANTHER PTHR13256 1 183 2.1E-122 T 26-04-2016 smi_0763 9577039b00040987befec0bb7e87282f 427 ProSitePatterns PS00885 EPSP synthase signature 2. 337 355 - T 26-04-2016 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 smi_0763 9577039b00040987befec0bb7e87282f 427 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 6 421 8.5E-121 T 26-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 smi_0763 9577039b00040987befec0bb7e87282f 427 PANTHER PTHR21090:SF5 5 427 2.0E-181 T 26-04-2016 smi_0763 9577039b00040987befec0bb7e87282f 427 Gene3D G3DSA:3.65.10.10 229 424 6.1E-54 T 26-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 smi_0763 9577039b00040987befec0bb7e87282f 427 ProSitePatterns PS00104 EPSP synthase signature 1. 86 100 - T 26-04-2016 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 smi_0763 9577039b00040987befec0bb7e87282f 427 PIRSF PIRSF000505 1 427 3.2E-116 T 26-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 smi_0763 9577039b00040987befec0bb7e87282f 427 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 8 427 33.316 T 26-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 smi_0763 9577039b00040987befec0bb7e87282f 427 SUPERFAMILY SSF55205 3 424 8.99E-137 T 26-04-2016 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 smi_0763 9577039b00040987befec0bb7e87282f 427 PANTHER PTHR21090 5 427 2.0E-181 T 26-04-2016 smi_0763 9577039b00040987befec0bb7e87282f 427 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 12 426 1.7E-138 T 26-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 smi_0763 9577039b00040987befec0bb7e87282f 427 Gene3D G3DSA:3.65.10.10 20 228 3.4E-60 T 26-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 smi_0612 a7fd231bdf3529207463e98e3dc7ec0e 283 SUPERFAMILY SSF53697 91 263 1.33E-31 T 26-04-2016 smi_0612 a7fd231bdf3529207463e98e3dc7ec0e 283 Pfam PF01418 Helix-turn-helix domain, rpiR family 7 79 1.2E-13 T 26-04-2016 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 smi_0612 a7fd231bdf3529207463e98e3dc7ec0e 283 PANTHER PTHR30514 1 261 2.4E-75 T 26-04-2016 smi_0612 a7fd231bdf3529207463e98e3dc7ec0e 283 Gene3D G3DSA:1.10.10.10 3 80 8.2E-15 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain smi_0612 a7fd231bdf3529207463e98e3dc7ec0e 283 SUPERFAMILY SSF46689 5 80 1.2E-13 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 smi_0612 a7fd231bdf3529207463e98e3dc7ec0e 283 PANTHER PTHR30514:SF1 1 261 2.4E-75 T 26-04-2016 smi_0612 a7fd231bdf3529207463e98e3dc7ec0e 283 Pfam PF01380 SIS domain 121 223 5.7E-14 T 26-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 smi_0612 a7fd231bdf3529207463e98e3dc7ec0e 283 Gene3D G3DSA:3.40.50.10490 91 263 1.1E-33 T 26-04-2016 smi_0383 253b079466110a9bb2156e6c7b45d8f7 444 Pfam PF04282 Family of unknown function (DUF438) 9 76 6.7E-23 T 26-04-2016 IPR007380 Domain of unknown function DUF438 smi_0383 253b079466110a9bb2156e6c7b45d8f7 444 PANTHER PTHR24423 316 437 3.2E-94 T 26-04-2016 smi_0383 253b079466110a9bb2156e6c7b45d8f7 444 PANTHER PTHR24423 1 211 3.2E-94 T 26-04-2016 smi_0383 253b079466110a9bb2156e6c7b45d8f7 444 Pfam PF01814 Hemerythrin HHE cation binding domain 88 222 7.9E-26 T 26-04-2016 IPR012312 Haemerythrin-like smi_0383 253b079466110a9bb2156e6c7b45d8f7 444 Gene3D G3DSA:1.20.120.520 303 326 9.6E-70 T 26-04-2016 smi_0383 253b079466110a9bb2156e6c7b45d8f7 444 Gene3D G3DSA:1.20.120.520 82 263 9.6E-70 T 26-04-2016 smi_0383 253b079466110a9bb2156e6c7b45d8f7 444 PANTHER PTHR24423:SF516 316 437 3.2E-94 T 26-04-2016 smi_0383 253b079466110a9bb2156e6c7b45d8f7 444 PANTHER PTHR24423:SF516 1 211 3.2E-94 T 26-04-2016 smi_0383 253b079466110a9bb2156e6c7b45d8f7 444 SUPERFAMILY SSF55785 316 424 2.05E-6 T 26-04-2016 IPR000014 PAS domain smi_0383 253b079466110a9bb2156e6c7b45d8f7 444 Pfam PF13596 PAS domain 321 430 1.4E-28 T 26-04-2016 smi_0383 253b079466110a9bb2156e6c7b45d8f7 444 Gene3D G3DSA:3.30.450.20 327 424 8.4E-10 T 26-04-2016 smi_1750 3f89bc5dea00ada0132ec64d5d2cae1f 474 SMART SM01350 180 471 1.7E-220 T 26-04-2016 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 smi_1750 3f89bc5dea00ada0132ec64d5d2cae1f 474 SUPERFAMILY SSF48179 178 473 1.7E-131 T 26-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 smi_1750 3f89bc5dea00ada0132ec64d5d2cae1f 474 SUPERFAMILY SSF51735 4 167 4.45E-49 T 26-04-2016 IPR016040 NAD(P)-binding domain smi_1750 3f89bc5dea00ada0132ec64d5d2cae1f 474 Pfam PF00393 6-phosphogluconate dehydrogenase, C-terminal domain 180 470 2.0E-130 T 26-04-2016 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 smi_1750 3f89bc5dea00ada0132ec64d5d2cae1f 474 PANTHER PTHR11811:SF25 1 473 3.1E-293 T 26-04-2016 smi_1750 3f89bc5dea00ada0132ec64d5d2cae1f 474 ProSitePatterns PS00461 6-phosphogluconate dehydrogenase signature. 256 268 - T 26-04-2016 IPR006184 6-phosphogluconate-binding site GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 smi_1750 3f89bc5dea00ada0132ec64d5d2cae1f 474 PANTHER PTHR11811 1 473 3.1E-293 T 26-04-2016 smi_1750 3f89bc5dea00ada0132ec64d5d2cae1f 474 PIRSF PIRSF000109 1 474 1.4E-235 T 26-04-2016 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 smi_1750 3f89bc5dea00ada0132ec64d5d2cae1f 474 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 4 27 1.2E-87 T 26-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 smi_1750 3f89bc5dea00ada0132ec64d5d2cae1f 474 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 169 197 1.2E-87 T 26-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 smi_1750 3f89bc5dea00ada0132ec64d5d2cae1f 474 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 119 144 1.2E-87 T 26-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 smi_1750 3f89bc5dea00ada0132ec64d5d2cae1f 474 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 360 382 1.2E-87 T 26-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 smi_1750 3f89bc5dea00ada0132ec64d5d2cae1f 474 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 252 279 1.2E-87 T 26-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 smi_1750 3f89bc5dea00ada0132ec64d5d2cae1f 474 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 66 95 1.2E-87 T 26-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 smi_1750 3f89bc5dea00ada0132ec64d5d2cae1f 474 Gene3D G3DSA:3.40.50.720 1 181 1.1E-57 T 26-04-2016 IPR016040 NAD(P)-binding domain smi_1750 3f89bc5dea00ada0132ec64d5d2cae1f 474 Gene3D G3DSA:1.20.5.320 439 471 2.3E-21 T 26-04-2016 IPR012284 6-phosphogluconate dehydrogenase, domain 3 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 smi_1750 3f89bc5dea00ada0132ec64d5d2cae1f 474 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 5 175 7.6E-49 T 26-04-2016 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 smi_1750 3f89bc5dea00ada0132ec64d5d2cae1f 474 TIGRFAM TIGR00873 gnd: 6-phosphogluconate dehydrogenase (decarboxylating) 5 471 3.8E-218 T 26-04-2016 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 smi_1750 3f89bc5dea00ada0132ec64d5d2cae1f 474 Gene3D G3DSA:1.10.1040.10 182 437 2.5E-115 T 26-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 smi_1359 b0922ec7a567fe8493698629e46c1ed4 246 SUPERFAMILY SSF100950 74 222 1.51E-35 T 26-04-2016 smi_1359 b0922ec7a567fe8493698629e46c1ed4 246 SMART SM01134 73 230 1.1E-68 T 26-04-2016 smi_1359 b0922ec7a567fe8493698629e46c1ed4 246 SUPERFAMILY SSF46785 4 79 3.91E-16 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain smi_1359 b0922ec7a567fe8493698629e46c1ed4 246 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 5.5E-9 T 26-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 smi_1359 b0922ec7a567fe8493698629e46c1ed4 246 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 5.5E-9 T 26-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 smi_1359 b0922ec7a567fe8493698629e46c1ed4 246 Pfam PF08220 DeoR-like helix-turn-helix domain 6 61 4.9E-19 T 26-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 smi_1359 b0922ec7a567fe8493698629e46c1ed4 246 PANTHER PTHR30363:SF4 1 246 4.4E-101 T 26-04-2016 smi_1359 b0922ec7a567fe8493698629e46c1ed4 246 Gene3D G3DSA:3.40.50.1360 77 220 6.7E-17 T 26-04-2016 smi_1359 b0922ec7a567fe8493698629e46c1ed4 246 PANTHER PTHR30363 1 246 4.4E-101 T 26-04-2016 smi_1359 b0922ec7a567fe8493698629e46c1ed4 246 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 26-04-2016 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 smi_1359 b0922ec7a567fe8493698629e46c1ed4 246 Pfam PF00455 DeoR C terminal sensor domain 75 226 1.1E-49 T 26-04-2016 IPR014036 DeoR C-terminal sensor domain smi_1359 b0922ec7a567fe8493698629e46c1ed4 246 SMART SM00420 6 58 1.4E-20 T 26-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 smi_1359 b0922ec7a567fe8493698629e46c1ed4 246 Gene3D G3DSA:1.10.10.10 3 56 1.6E-7 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain smi_0312 c52fcbe8abc5899d7039aecce01f30a5 227 PANTHER PTHR23291:SF42 1 227 7.6E-78 T 26-04-2016 smi_0312 c52fcbe8abc5899d7039aecce01f30a5 227 PANTHER PTHR23291 1 227 7.6E-78 T 26-04-2016 IPR006214 Bax inhibitor 1-related smi_0312 c52fcbe8abc5899d7039aecce01f30a5 227 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 13 223 7.4E-50 T 26-04-2016 smi_0264 2173095d3d4964c63af5928544a7e0a9 1463 Gene3D G3DSA:3.20.20.140 338 420 2.6E-61 T 26-04-2016 smi_0264 2173095d3d4964c63af5928544a7e0a9 1463 Gene3D G3DSA:3.20.20.140 634 810 2.6E-61 T 26-04-2016 smi_0264 2173095d3d4964c63af5928544a7e0a9 1463 Pfam PF00929 Exonuclease 426 580 1.4E-33 T 26-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III smi_0264 2173095d3d4964c63af5928544a7e0a9 1463 SMART SM00479 424 590 4.7E-46 T 26-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III smi_0264 2173095d3d4964c63af5928544a7e0a9 1463 SUPERFAMILY SSF89550 351 430 3.14E-5 T 26-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 smi_0264 2173095d3d4964c63af5928544a7e0a9 1463 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 840 1267 7.8E-92 T 26-04-2016 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 smi_0264 2173095d3d4964c63af5928544a7e0a9 1463 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 420 639 5.9E-38 T 26-04-2016 IPR006054 DNA polymerase III, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 smi_0264 2173095d3d4964c63af5928544a7e0a9 1463 Hamap MF_00356 DNA polymerase III PolC-type [polC]. 1 1463 423.971 T 26-04-2016 IPR006308 DNA polymerase III, alpha subunit, Gram-positive type GO:0003677|GO:0003887|GO:0005737|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 smi_0264 2173095d3d4964c63af5928544a7e0a9 1463 Gene3D G3DSA:3.30.420.10 421 594 1.4E-59 T 26-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 smi_0264 2173095d3d4964c63af5928544a7e0a9 1463 PANTHER PTHR23044 1122 1435 0.0 T 26-04-2016 smi_0264 2173095d3d4964c63af5928544a7e0a9 1463 PANTHER PTHR23044 943 1084 0.0 T 26-04-2016 smi_0264 2173095d3d4964c63af5928544a7e0a9 1463 PANTHER PTHR23044 22 554 0.0 T 26-04-2016 smi_0264 2173095d3d4964c63af5928544a7e0a9 1463 PANTHER PTHR23044 840 925 0.0 T 26-04-2016 smi_0264 2173095d3d4964c63af5928544a7e0a9 1463 TIGRFAM TIGR01405 polC_Gram_pos: DNA polymerase III, alpha subunit, Gram-positive type 234 1459 0.0 T 26-04-2016 IPR006308 DNA polymerase III, alpha subunit, Gram-positive type GO:0003677|GO:0003887|GO:0005737|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 smi_0264 2173095d3d4964c63af5928544a7e0a9 1463 PANTHER PTHR23044:SF26 1122 1435 0.0 T 26-04-2016 smi_0264 2173095d3d4964c63af5928544a7e0a9 1463 PANTHER PTHR23044:SF26 943 1084 0.0 T 26-04-2016 smi_0264 2173095d3d4964c63af5928544a7e0a9 1463 PANTHER PTHR23044:SF26 22 554 0.0 T 26-04-2016 smi_0264 2173095d3d4964c63af5928544a7e0a9 1463 PANTHER PTHR23044:SF26 840 925 0.0 T 26-04-2016 smi_0264 2173095d3d4964c63af5928544a7e0a9 1463 SMART SM00481 339 406 8.1E-28 T 26-04-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 smi_0264 2173095d3d4964c63af5928544a7e0a9 1463 Pfam PF11490 DNA polymerase III polC-type N-terminus II 92 206 1.8E-23 T 26-04-2016 IPR024754 DNA polymerase III polC-like, N-terminal domain II KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 smi_0264 2173095d3d4964c63af5928544a7e0a9 1463 SUPERFAMILY SSF50249 237 326 7.88E-11 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold smi_0264 2173095d3d4964c63af5928544a7e0a9 1463 Pfam PF02811 PHP domain 340 698 1.3E-50 T 26-04-2016 IPR004013 PHP domain GO:0003824 smi_0264 2173095d3d4964c63af5928544a7e0a9 1463 SUPERFAMILY SSF53098 424 890 3.71E-96 T 26-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 smi_0264 2173095d3d4964c63af5928544a7e0a9 1463 Pfam PF14480 DNA polymerase III polC-type N-terminus I 5 74 2.7E-18 T 26-04-2016 IPR028112 DNA polymerase III polC-type, N-terminal domain I KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 smi_0264 2173095d3d4964c63af5928544a7e0a9 1463 Gene3D G3DSA:2.40.50.140 241 324 1.4E-6 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold smi_0264 2173095d3d4964c63af5928544a7e0a9 1463 Gene3D G3DSA:1.10.150.280 1397 1446 1.2E-6 T 26-04-2016 smi_0345 e4189bb81d739a10ae32dd300d805022 1757 TIGRFAM TIGR01168 YSIRK_signal: gram-positive signal peptide, YSIRK family 1 39 2.2E-13 T 26-04-2016 IPR005877 YSIRK Gram-positive signal peptide GO:0016020 smi_0345 e4189bb81d739a10ae32dd300d805022 1757 Gene3D G3DSA:1.20.5.420 1236 1300 3.7E-8 T 26-04-2016 smi_0345 e4189bb81d739a10ae32dd300d805022 1757 SMART SM01208 1521 1595 6.9E-11 T 26-04-2016 IPR011098 G5 domain smi_0345 e4189bb81d739a10ae32dd300d805022 1757 SMART SM01208 1619 1693 4.9E-15 T 26-04-2016 IPR011098 G5 domain smi_0345 e4189bb81d739a10ae32dd300d805022 1757 PANTHER PTHR13246:SF1 1 705 3.3E-112 T 26-04-2016 smi_0345 e4189bb81d739a10ae32dd300d805022 1757 Pfam PF07501 G5 domain 1625 1692 2.9E-11 T 26-04-2016 IPR011098 G5 domain smi_0345 e4189bb81d739a10ae32dd300d805022 1757 Pfam PF07501 G5 domain 1527 1593 3.8E-10 T 26-04-2016 IPR011098 G5 domain smi_0345 e4189bb81d739a10ae32dd300d805022 1757 Pfam PF03644 Glycosyl hydrolase family 85 240 541 8.1E-74 T 26-04-2016 IPR005201 Glycoside hydrolase, family 85 GO:0005737|GO:0033925 KEGG: 00511+3.2.1.96 smi_0345 e4189bb81d739a10ae32dd300d805022 1757 Pfam PF04650 YSIRK type signal peptide 7 31 1.9E-10 T 26-04-2016 IPR005877 YSIRK Gram-positive signal peptide GO:0016020 smi_0345 e4189bb81d739a10ae32dd300d805022 1757 TIGRFAM TIGR01167 LPXTG_anchor: LPXTG cell wall anchor domain 1720 1753 8.6E-5 T 26-04-2016 IPR019931 LPXTG cell wall anchor domain smi_0345 e4189bb81d739a10ae32dd300d805022 1757 Pfam PF07523 Bacterial Ig-like domain (group 3) 1068 1139 2.3E-16 T 26-04-2016 IPR022038 Bacterial Ig-like domain smi_0345 e4189bb81d739a10ae32dd300d805022 1757 Pfam PF07523 Bacterial Ig-like domain (group 3) 1157 1225 7.3E-14 T 26-04-2016 IPR022038 Bacterial Ig-like domain smi_0345 e4189bb81d739a10ae32dd300d805022 1757 PANTHER PTHR13246 1 705 3.3E-112 T 26-04-2016 IPR032979 Cytosolic endo-beta-N-acetylglucosaminidase GO:0033925 KEGG: 00511+3.2.1.96 smi_1679 7e45b94d8397c6fac336b6cfed273c7b 411 PIRSF PIRSF000447 1 410 4.5E-188 T 26-04-2016 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 UniPathway: UPA00094 smi_1679 7e45b94d8397c6fac336b6cfed273c7b 411 SUPERFAMILY SSF53901 214 408 1.92E-65 T 26-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 smi_1679 7e45b94d8397c6fac336b6cfed273c7b 411 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 4 406 2.3E-171 T 26-04-2016 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 UniPathway: UPA00094 smi_1679 7e45b94d8397c6fac336b6cfed273c7b 411 PANTHER PTHR11712 5 410 5.2E-180 T 26-04-2016 smi_1679 7e45b94d8397c6fac336b6cfed273c7b 411 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 4 246 1.2E-56 T 26-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal smi_1679 7e45b94d8397c6fac336b6cfed273c7b 411 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 155 171 - T 26-04-2016 IPR018201 Beta-ketoacyl synthase, active site smi_1679 7e45b94d8397c6fac336b6cfed273c7b 411 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 254 364 2.3E-31 T 26-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal smi_1679 7e45b94d8397c6fac336b6cfed273c7b 411 Gene3D G3DSA:3.40.47.10 263 409 9.8E-55 T 26-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 smi_1679 7e45b94d8397c6fac336b6cfed273c7b 411 SMART SM00825 Beta-ketoacyl synthase 6 399 3.1E-13 T 26-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain smi_1679 7e45b94d8397c6fac336b6cfed273c7b 411 Gene3D G3DSA:3.40.47.10 4 259 2.2E-74 T 26-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 smi_1679 7e45b94d8397c6fac336b6cfed273c7b 411 SUPERFAMILY SSF53901 4 251 7.39E-74 T 26-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 smi_1161 c6f3bdbc772c993e7c2303f45c435a3d 371 PANTHER PTHR21599 1 368 1.1E-136 T 26-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 smi_1161 c6f3bdbc772c993e7c2303f45c435a3d 371 PIRSF PIRSF006078 1 371 1.1E-125 T 26-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 smi_1161 c6f3bdbc772c993e7c2303f45c435a3d 371 Pfam PF02595 Glycerate kinase family 3 366 3.5E-116 T 26-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 smi_1161 c6f3bdbc772c993e7c2303f45c435a3d 371 SUPERFAMILY SSF110738 1 368 1.05E-120 T 26-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 smi_1161 c6f3bdbc772c993e7c2303f45c435a3d 371 TIGRFAM TIGR00045 TIGR00045: glycerate kinase 2 368 6.3E-145 T 26-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 smi_1161 c6f3bdbc772c993e7c2303f45c435a3d 371 Gene3D G3DSA:3.90.1510.10 43 269 5.8E-70 T 26-04-2016 IPR018193 Glycerate kinase, flavodoxin-like domain GO:0008887|GO:0031388 smi_1161 c6f3bdbc772c993e7c2303f45c435a3d 371 PANTHER PTHR21599:SF0 1 368 1.1E-136 T 26-04-2016 smi_1586 39f5dcbc27e158a80df85e1bac781f79 553 Hamap MF_01491 Ribonuclease J [rnj]. 1 552 37.319 T 26-04-2016 IPR030854 Ribonuclease J, bacteria GO:0004521|GO:0004534|GO:0006396|GO:0008270|GO:0090501 smi_1586 39f5dcbc27e158a80df85e1bac781f79 553 Gene3D G3DSA:3.60.15.10 2 253 9.1E-66 T 26-04-2016 IPR001279 Metallo-beta-lactamase smi_1586 39f5dcbc27e158a80df85e1bac781f79 553 SUPERFAMILY SSF56281 5 418 2.23E-69 T 26-04-2016 IPR001279 Metallo-beta-lactamase smi_1586 39f5dcbc27e158a80df85e1bac781f79 553 TIGRFAM TIGR00649 MG423: beta-CASP ribonuclease, RNase J family 4 550 1.3E-143 T 26-04-2016 IPR004613 Ribonuclease J GO:0003723|GO:0046872 smi_1586 39f5dcbc27e158a80df85e1bac781f79 553 SMART SM00849 16 216 2.0E-18 T 26-04-2016 IPR001279 Metallo-beta-lactamase smi_1586 39f5dcbc27e158a80df85e1bac781f79 553 PANTHER PTHR11203 1 551 0.0 T 26-04-2016 smi_1586 39f5dcbc27e158a80df85e1bac781f79 553 Pfam PF00753 Metallo-beta-lactamase superfamily 18 163 1.2E-11 T 26-04-2016 IPR001279 Metallo-beta-lactamase smi_1586 39f5dcbc27e158a80df85e1bac781f79 553 PANTHER PTHR11203:SF38 1 551 0.0 T 26-04-2016 smi_1586 39f5dcbc27e158a80df85e1bac781f79 553 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 357 412 4.8E-10 T 26-04-2016 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain smi_0346 d2194b272f0231457f86df12220ca962 398 PRINTS PR00477 Phosphoglycerate kinase family signature 143 165 1.9E-91 T 26-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 smi_0346 d2194b272f0231457f86df12220ca962 398 PRINTS PR00477 Phosphoglycerate kinase family signature 373 390 1.9E-91 T 26-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 smi_0346 d2194b272f0231457f86df12220ca962 398 PRINTS PR00477 Phosphoglycerate kinase family signature 110 125 1.9E-91 T 26-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 smi_0346 d2194b272f0231457f86df12220ca962 398 PRINTS PR00477 Phosphoglycerate kinase family signature 31 53 1.9E-91 T 26-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 smi_0346 d2194b272f0231457f86df12220ca962 398 PRINTS PR00477 Phosphoglycerate kinase family signature 174 196 1.9E-91 T 26-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 smi_0346 d2194b272f0231457f86df12220ca962 398 PRINTS PR00477 Phosphoglycerate kinase family signature 350 361 1.9E-91 T 26-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 smi_0346 d2194b272f0231457f86df12220ca962 398 PRINTS PR00477 Phosphoglycerate kinase family signature 197 216 1.9E-91 T 26-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 smi_0346 d2194b272f0231457f86df12220ca962 398 PRINTS PR00477 Phosphoglycerate kinase family signature 10 26 1.9E-91 T 26-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 smi_0346 d2194b272f0231457f86df12220ca962 398 PRINTS PR00477 Phosphoglycerate kinase family signature 316 341 1.9E-91 T 26-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 smi_0346 d2194b272f0231457f86df12220ca962 398 PANTHER PTHR11406 1 398 5.3E-202 T 26-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 smi_0346 d2194b272f0231457f86df12220ca962 398 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 8 397 39.324 T 26-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 smi_0346 d2194b272f0231457f86df12220ca962 398 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 15 25 - T 26-04-2016 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 smi_0346 d2194b272f0231457f86df12220ca962 398 Gene3D G3DSA:3.40.50.1260 4 185 6.5E-67 T 26-04-2016 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 smi_0346 d2194b272f0231457f86df12220ca962 398 PIRSF PIRSF000724 1 398 6.6E-129 T 26-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 smi_0346 d2194b272f0231457f86df12220ca962 398 SUPERFAMILY SSF53748 3 397 1.41E-141 T 26-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 smi_0346 d2194b272f0231457f86df12220ca962 398 Gene3D G3DSA:3.40.50.1270 186 385 3.5E-76 T 26-04-2016 IPR015901 Phosphoglycerate kinase, C-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 smi_0346 d2194b272f0231457f86df12220ca962 398 Pfam PF00162 Phosphoglycerate kinase 6 387 2.0E-144 T 26-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 smi_1306 440b48b3affcf66b3c6f97eb4a997e9d 2474 Pfam PF07564 Domain of Unknown Function (DUF1542) 934 1003 2.5E-11 T 26-04-2016 IPR011439 Domain of unknown function DUF1542 smi_1306 440b48b3affcf66b3c6f97eb4a997e9d 2474 Pfam PF07564 Domain of Unknown Function (DUF1542) 1502 1558 3.6E-8 T 26-04-2016 IPR011439 Domain of unknown function DUF1542 smi_1306 440b48b3affcf66b3c6f97eb4a997e9d 2474 Pfam PF07564 Domain of Unknown Function (DUF1542) 1425 1492 2.8E-9 T 26-04-2016 IPR011439 Domain of unknown function DUF1542 smi_1306 440b48b3affcf66b3c6f97eb4a997e9d 2474 Pfam PF07564 Domain of Unknown Function (DUF1542) 1174 1252 5.7E-6 T 26-04-2016 IPR011439 Domain of unknown function DUF1542 smi_1306 440b48b3affcf66b3c6f97eb4a997e9d 2474 Pfam PF07564 Domain of Unknown Function (DUF1542) 1014 1077 4.1E-13 T 26-04-2016 IPR011439 Domain of unknown function DUF1542 smi_1306 440b48b3affcf66b3c6f97eb4a997e9d 2474 Pfam PF07564 Domain of Unknown Function (DUF1542) 1262 1325 2.5E-11 T 26-04-2016 IPR011439 Domain of unknown function DUF1542 smi_1306 440b48b3affcf66b3c6f97eb4a997e9d 2474 Pfam PF00746 Gram positive anchor 2434 2470 2.4E-7 T 26-04-2016 IPR019948 Gram-positive anchor smi_1306 440b48b3affcf66b3c6f97eb4a997e9d 2474 TIGRFAM TIGR01167 LPXTG_anchor: LPXTG cell wall anchor domain 2440 2473 1.6E-7 T 26-04-2016 IPR019931 LPXTG cell wall anchor domain smi_1306 440b48b3affcf66b3c6f97eb4a997e9d 2474 TIGRFAM TIGR01168 YSIRK_signal: gram-positive signal peptide, YSIRK family 15 48 2.8E-12 T 26-04-2016 IPR005877 YSIRK Gram-positive signal peptide GO:0016020 smi_1306 440b48b3affcf66b3c6f97eb4a997e9d 2474 Pfam PF04650 YSIRK type signal peptide 16 41 7.9E-11 T 26-04-2016 IPR005877 YSIRK Gram-positive signal peptide GO:0016020 smi_1126 4d6723c959b8da99980dc01f5f188c9a 278 PANTHER PTHR18895:SF64 37 273 1.3E-84 T 26-04-2016 smi_1126 4d6723c959b8da99980dc01f5f188c9a 278 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 178 184 - T 26-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 smi_1126 4d6723c959b8da99980dc01f5f188c9a 278 PANTHER PTHR18895 37 273 1.3E-84 T 26-04-2016 smi_1126 4d6723c959b8da99980dc01f5f188c9a 278 Pfam PF05175 Methyltransferase small domain 106 191 2.7E-18 T 26-04-2016 IPR007848 Methyltransferase small domain GO:0008168 smi_1126 4d6723c959b8da99980dc01f5f188c9a 278 Gene3D G3DSA:3.40.50.150 86 273 3.1E-63 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase smi_1126 4d6723c959b8da99980dc01f5f188c9a 278 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 42 272 4.0E-67 T 26-04-2016 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 smi_1126 4d6723c959b8da99980dc01f5f188c9a 278 Gene3D G3DSA:1.10.8.10 1 84 1.5E-7 T 26-04-2016 smi_1126 4d6723c959b8da99980dc01f5f188c9a 278 SUPERFAMILY SSF53335 34 252 1.44E-48 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase smi_1126 4d6723c959b8da99980dc01f5f188c9a 278 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 27 271 4.2E-81 T 26-04-2016 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 smi_1126 4d6723c959b8da99980dc01f5f188c9a 278 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 1 275 41.271 T 26-04-2016 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 smi_0705 0a695d4e51f08e979a5f08b8ecdfe032 2183 Gene3D G3DSA:3.40.50.200 651 777 7.1E-88 T 26-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 smi_0705 0a695d4e51f08e979a5f08b8ecdfe032 2183 Gene3D G3DSA:3.40.50.200 209 457 7.1E-88 T 26-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 smi_0705 0a695d4e51f08e979a5f08b8ecdfe032 2183 Pfam PF00082 Subtilase family 227 768 1.1E-42 T 26-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 smi_0705 0a695d4e51f08e979a5f08b8ecdfe032 2183 Pfam PF02225 PA domain 501 565 2.9E-5 T 26-04-2016 IPR003137 PA domain smi_0705 0a695d4e51f08e979a5f08b8ecdfe032 2183 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 303 313 - T 26-04-2016 IPR022398 Peptidase S8, subtilisin, His-active site smi_0705 0a695d4e51f08e979a5f08b8ecdfe032 2183 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 692 702 - T 26-04-2016 IPR023828 Peptidase S8, subtilisin, Ser-active site smi_0705 0a695d4e51f08e979a5f08b8ecdfe032 2183 PANTHER PTHR10795:SF419 426 480 2.9E-72 T 26-04-2016 smi_0705 0a695d4e51f08e979a5f08b8ecdfe032 2183 PANTHER PTHR10795:SF419 121 249 2.9E-72 T 26-04-2016 smi_0705 0a695d4e51f08e979a5f08b8ecdfe032 2183 PANTHER PTHR10795:SF419 280 407 2.9E-72 T 26-04-2016 smi_0705 0a695d4e51f08e979a5f08b8ecdfe032 2183 PANTHER PTHR10795:SF419 507 596 2.9E-72 T 26-04-2016 smi_0705 0a695d4e51f08e979a5f08b8ecdfe032 2183 PANTHER PTHR10795:SF419 726 777 2.9E-72 T 26-04-2016 smi_0705 0a695d4e51f08e979a5f08b8ecdfe032 2183 PANTHER PTHR10795:SF419 640 709 2.9E-72 T 26-04-2016 smi_0705 0a695d4e51f08e979a5f08b8ecdfe032 2183 SUPERFAMILY SSF52743 221 460 3.53E-49 T 26-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 smi_0705 0a695d4e51f08e979a5f08b8ecdfe032 2183 SUPERFAMILY SSF52743 647 776 3.53E-49 T 26-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 smi_0705 0a695d4e51f08e979a5f08b8ecdfe032 2183 Pfam PF06280 Fn3-like domain 799 938 6.6E-29 T 26-04-2016 IPR010435 Fn3-like domain GO:0004252|GO:0005618|GO:0016020 smi_0705 0a695d4e51f08e979a5f08b8ecdfe032 2183 PANTHER PTHR10795 426 480 2.9E-72 T 26-04-2016 IPR015500 Peptidase S8, subtilisin-related smi_0705 0a695d4e51f08e979a5f08b8ecdfe032 2183 PANTHER PTHR10795 121 249 2.9E-72 T 26-04-2016 IPR015500 Peptidase S8, subtilisin-related smi_0705 0a695d4e51f08e979a5f08b8ecdfe032 2183 PANTHER PTHR10795 280 407 2.9E-72 T 26-04-2016 IPR015500 Peptidase S8, subtilisin-related smi_0705 0a695d4e51f08e979a5f08b8ecdfe032 2183 PANTHER PTHR10795 507 596 2.9E-72 T 26-04-2016 IPR015500 Peptidase S8, subtilisin-related smi_0705 0a695d4e51f08e979a5f08b8ecdfe032 2183 PANTHER PTHR10795 726 777 2.9E-72 T 26-04-2016 IPR015500 Peptidase S8, subtilisin-related smi_0705 0a695d4e51f08e979a5f08b8ecdfe032 2183 PANTHER PTHR10795 640 709 2.9E-72 T 26-04-2016 IPR015500 Peptidase S8, subtilisin-related smi_0705 0a695d4e51f08e979a5f08b8ecdfe032 2183 TIGRFAM TIGR01167 LPXTG_anchor: LPXTG cell wall anchor domain 2150 2180 0.0016 T 26-04-2016 IPR019931 LPXTG cell wall anchor domain smi_0705 0a695d4e51f08e979a5f08b8ecdfe032 2183 Gene3D G3DSA:3.50.30.30 486 593 2.2E-7 T 26-04-2016 smi_0705 0a695d4e51f08e979a5f08b8ecdfe032 2183 PRINTS PR00723 Subtilisin serine protease family (S8) signature 227 246 2.1E-6 T 26-04-2016 IPR015500 Peptidase S8, subtilisin-related smi_0705 0a695d4e51f08e979a5f08b8ecdfe032 2183 PRINTS PR00723 Subtilisin serine protease family (S8) signature 691 707 2.1E-6 T 26-04-2016 IPR015500 Peptidase S8, subtilisin-related smi_0037 4b20c1ef1e8ce28cfa037584c599c6fb 432 Gene3D G3DSA:2.10.270.10 310 347 4.3E-10 T 26-04-2016 smi_0037 4b20c1ef1e8ce28cfa037584c599c6fb 432 Pfam PF01473 Putative cell wall binding repeat 357 373 1.1E-5 T 26-04-2016 IPR018337 Cell wall/choline-binding repeat smi_0037 4b20c1ef1e8ce28cfa037584c599c6fb 432 Pfam PF01473 Putative cell wall binding repeat 335 353 1.7E-5 T 26-04-2016 IPR018337 Cell wall/choline-binding repeat smi_0037 4b20c1ef1e8ce28cfa037584c599c6fb 432 Pfam PF01473 Putative cell wall binding repeat 375 393 2.1E-5 T 26-04-2016 IPR018337 Cell wall/choline-binding repeat smi_0037 4b20c1ef1e8ce28cfa037584c599c6fb 432 Pfam PF01473 Putative cell wall binding repeat 397 413 0.011 T 26-04-2016 IPR018337 Cell wall/choline-binding repeat smi_0037 4b20c1ef1e8ce28cfa037584c599c6fb 432 SUPERFAMILY SSF69360 313 432 1.96E-35 T 26-04-2016 smi_0037 4b20c1ef1e8ce28cfa037584c599c6fb 432 Gene3D G3DSA:2.10.270.10 348 432 4.4E-24 T 26-04-2016 smi_0998 c95927c0f1849bd974c706ce0ef9c2e3 436 PIRSF PIRSF002401 1 384 6.4E-139 T 26-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 smi_0998 c95927c0f1849bd974c706ce0ef9c2e3 436 Pfam PF09269 Domain of unknown function (DUF1967) 366 434 1.4E-25 T 26-04-2016 IPR015349 GTP-binding protein OBG, C-terminal GO:0000166 smi_0998 c95927c0f1849bd974c706ce0ef9c2e3 436 Gene3D G3DSA:3.40.50.300 161 343 2.3E-54 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0998 c95927c0f1849bd974c706ce0ef9c2e3 436 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 4 337 3.8E-139 T 26-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 smi_0998 c95927c0f1849bd974c706ce0ef9c2e3 436 Hamap MF_01454 GTPase Obg [obg]. 3 338 46.868 T 26-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 smi_0998 c95927c0f1849bd974c706ce0ef9c2e3 436 Pfam PF01926 50S ribosome-binding GTPase 162 285 3.3E-22 T 26-04-2016 IPR006073 GTP binding domain GO:0005525 smi_0998 c95927c0f1849bd974c706ce0ef9c2e3 436 Gene3D G3DSA:2.70.210.12 3 157 1.5E-57 T 26-04-2016 IPR006169 GTP1/OBG domain GO:0005525 smi_0998 c95927c0f1849bd974c706ce0ef9c2e3 436 ProSitePatterns PS00905 GTP1/OBG family signature. 214 227 - T 26-04-2016 IPR006074 GTP1/OBG, conserved site GO:0005525 smi_0998 c95927c0f1849bd974c706ce0ef9c2e3 436 PANTHER PTHR11702 4 374 1.2E-170 T 26-04-2016 smi_0998 c95927c0f1849bd974c706ce0ef9c2e3 436 Pfam PF01018 GTP1/OBG 4 159 2.6E-60 T 26-04-2016 IPR006169 GTP1/OBG domain GO:0005525 smi_0998 c95927c0f1849bd974c706ce0ef9c2e3 436 SUPERFAMILY SSF82051 3 159 1.23E-54 T 26-04-2016 IPR006169 GTP1/OBG domain GO:0005525 smi_0998 c95927c0f1849bd974c706ce0ef9c2e3 436 SUPERFAMILY SSF52540 152 341 4.84E-53 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0998 c95927c0f1849bd974c706ce0ef9c2e3 436 TIGRFAM TIGR03595 Obg_CgtA_exten: Obg family GTPase CgtA, C-terminal extension 366 435 7.6E-27 T 26-04-2016 IPR015349 GTP-binding protein OBG, C-terminal GO:0000166 smi_0998 c95927c0f1849bd974c706ce0ef9c2e3 436 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 162 331 6.0E-13 T 26-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 smi_0998 c95927c0f1849bd974c706ce0ef9c2e3 436 PANTHER PTHR11702:SF3 4 374 1.2E-170 T 26-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 smi_0998 c95927c0f1849bd974c706ce0ef9c2e3 436 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 212 227 1.66E-34 T 26-04-2016 IPR006073 GTP binding domain GO:0005525 smi_0998 c95927c0f1849bd974c706ce0ef9c2e3 436 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 229 247 1.66E-34 T 26-04-2016 IPR006073 GTP binding domain GO:0005525 smi_0998 c95927c0f1849bd974c706ce0ef9c2e3 436 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 184 202 1.66E-34 T 26-04-2016 IPR006073 GTP binding domain GO:0005525 smi_0998 c95927c0f1849bd974c706ce0ef9c2e3 436 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 163 183 1.66E-34 T 26-04-2016 IPR006073 GTP binding domain GO:0005525 smi_0998 c95927c0f1849bd974c706ce0ef9c2e3 436 SUPERFAMILY SSF102741 364 436 2.75E-23 T 26-04-2016 IPR015349 GTP-binding protein OBG, C-terminal GO:0000166 smi_0332 52b2c4e8eede18dabf313d5f5868878e 264 TIGRFAM TIGR00067 glut_race: glutamate racemase 6 254 8.8E-79 T 26-04-2016 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 smi_0332 52b2c4e8eede18dabf313d5f5868878e 264 SUPERFAMILY SSF53681 110 261 1.07E-40 T 26-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 smi_0332 52b2c4e8eede18dabf313d5f5868878e 264 PANTHER PTHR21198:SF2 1 264 5.5E-121 T 26-04-2016 smi_0332 52b2c4e8eede18dabf313d5f5868878e 264 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 70 78 - T 26-04-2016 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 smi_0332 52b2c4e8eede18dabf313d5f5868878e 264 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 179 189 - T 26-04-2016 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 smi_0332 52b2c4e8eede18dabf313d5f5868878e 264 Gene3D G3DSA:3.40.50.1860 2 172 8.9E-59 T 26-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 smi_0332 52b2c4e8eede18dabf313d5f5868878e 264 PANTHER PTHR21198 1 264 5.5E-121 T 26-04-2016 smi_0332 52b2c4e8eede18dabf313d5f5868878e 264 SUPERFAMILY SSF53681 5 106 1.63E-35 T 26-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 smi_0332 52b2c4e8eede18dabf313d5f5868878e 264 Hamap MF_00258 Glutamate racemase [murI]. 4 256 40.747 T 26-04-2016 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 smi_0332 52b2c4e8eede18dabf313d5f5868878e 264 Pfam PF01177 Asp/Glu/Hydantoin racemase 6 213 4.1E-37 T 26-04-2016 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 smi_1309 150f3b211d29281b2738c8179155f70d 468 Gene3D G3DSA:3.40.50.300 80 349 1.7E-108 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1309 150f3b211d29281b2738c8179155f70d 468 SUPERFAMILY SSF50615 2 79 8.83E-24 T 26-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 smi_1309 150f3b211d29281b2738c8179155f70d 468 Gene3D G3DSA:1.10.1140.10 352 466 2.9E-50 T 26-04-2016 IPR024034 ATPase, F1 complex beta subunit/V1 complex, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 smi_1309 150f3b211d29281b2738c8179155f70d 468 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 6 77 1.9E-21 T 26-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 smi_1309 150f3b211d29281b2738c8179155f70d 468 SUPERFAMILY SSF52540 81 351 7.64E-89 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1309 150f3b211d29281b2738c8179155f70d 468 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 339 348 - T 26-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 smi_1309 150f3b211d29281b2738c8179155f70d 468 PANTHER PTHR15184:SF8 1 466 0.0 T 26-04-2016 smi_1309 150f3b211d29281b2738c8179155f70d 468 PANTHER PTHR15184 1 466 0.0 T 26-04-2016 smi_1309 150f3b211d29281b2738c8179155f70d 468 SMART SM00382 147 332 2.0E-7 T 26-04-2016 IPR003593 AAA+ ATPase domain smi_1309 150f3b211d29281b2738c8179155f70d 468 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 3 466 5.2E-252 T 26-04-2016 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 smi_1309 150f3b211d29281b2738c8179155f70d 468 SUPERFAMILY SSF47917 351 466 2.38E-49 T 26-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 smi_1309 150f3b211d29281b2738c8179155f70d 468 Hamap MF_01347 ATP synthase subunit beta [atpB]. 1 466 57.153 T 26-04-2016 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 smi_1309 150f3b211d29281b2738c8179155f70d 468 Gene3D G3DSA:2.40.10.170 2 79 7.0E-31 T 26-04-2016 smi_1309 150f3b211d29281b2738c8179155f70d 468 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 135 348 2.6E-67 T 26-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 smi_1054 65dc70753815d5e7ac59fea5939c66f7 230 Pfam PF13419 Haloacid dehalogenase-like hydrolase 6 199 6.8E-25 T 26-04-2016 IPR023214 HAD-like domain smi_1054 65dc70753815d5e7ac59fea5939c66f7 230 Gene3D G3DSA:1.10.150.240 16 92 5.9E-28 T 26-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 smi_1054 65dc70753815d5e7ac59fea5939c66f7 230 PANTHER PTHR12725:SF57 1 230 1.2E-46 T 26-04-2016 smi_1054 65dc70753815d5e7ac59fea5939c66f7 230 PANTHER PTHR12725 1 230 1.2E-46 T 26-04-2016 smi_1054 65dc70753815d5e7ac59fea5939c66f7 230 SUPERFAMILY SSF56784 3 229 1.49E-45 T 26-04-2016 IPR023214 HAD-like domain smi_1054 65dc70753815d5e7ac59fea5939c66f7 230 TIGRFAM TIGR02254 YjjG/YfnB: noncanonical pyrimidine nucleotidase, YjjG family 3 225 2.9E-62 T 26-04-2016 IPR011951 HAD-superfamily hydrolase, subfamily IA, YjjG/YfnB GO:0016787 smi_1054 65dc70753815d5e7ac59fea5939c66f7 230 Gene3D G3DSA:3.40.50.1000 93 229 8.7E-42 T 26-04-2016 IPR023214 HAD-like domain smi_1054 65dc70753815d5e7ac59fea5939c66f7 230 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 95 194 2.0E-8 T 26-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 smi_0545 07bc02a8391cad7f90a94556253f729a 199 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 2 194 36.23 T 26-04-2016 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24|UniPathway: UPA00035 smi_0545 07bc02a8391cad7f90a94556253f729a 199 PANTHER PTHR22854 2 199 1.1E-63 T 26-04-2016 smi_0545 07bc02a8391cad7f90a94556253f729a 199 PANTHER PTHR22854:SF6 2 199 1.1E-63 T 26-04-2016 smi_0545 07bc02a8391cad7f90a94556253f729a 199 Gene3D G3DSA:3.20.20.70 2 193 2.0E-66 T 26-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 smi_0545 07bc02a8391cad7f90a94556253f729a 199 SUPERFAMILY SSF51366 2 192 2.83E-52 T 26-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 smi_0545 07bc02a8391cad7f90a94556253f729a 199 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 4 189 8.7E-47 T 26-04-2016 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24|UniPathway: UPA00035 smi_0157 7519ba4c2e28155ebf7ad43039261faf 449 PRINTS PR00662 Glucose-6-phosphate isomerase signature 395 409 2.5E-25 T 26-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 smi_0157 7519ba4c2e28155ebf7ad43039261faf 449 PRINTS PR00662 Glucose-6-phosphate isomerase signature 409 422 2.5E-25 T 26-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 smi_0157 7519ba4c2e28155ebf7ad43039261faf 449 PRINTS PR00662 Glucose-6-phosphate isomerase signature 199 217 2.5E-25 T 26-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 smi_0157 7519ba4c2e28155ebf7ad43039261faf 449 PRINTS PR00662 Glucose-6-phosphate isomerase signature 77 96 2.5E-25 T 26-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 smi_0157 7519ba4c2e28155ebf7ad43039261faf 449 PRINTS PR00662 Glucose-6-phosphate isomerase signature 377 395 2.5E-25 T 26-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 smi_0157 7519ba4c2e28155ebf7ad43039261faf 449 PRINTS PR00662 Glucose-6-phosphate isomerase signature 274 295 2.5E-25 T 26-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 smi_0157 7519ba4c2e28155ebf7ad43039261faf 449 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 203 216 - T 26-04-2016 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 smi_0157 7519ba4c2e28155ebf7ad43039261faf 449 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 1 436 24.715 T 26-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 smi_0157 7519ba4c2e28155ebf7ad43039261faf 449 Gene3D G3DSA:3.40.50.10490 201 418 6.4E-92 T 26-04-2016 smi_0157 7519ba4c2e28155ebf7ad43039261faf 449 PANTHER PTHR11469 57 447 1.0E-153 T 26-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 smi_0157 7519ba4c2e28155ebf7ad43039261faf 449 Pfam PF00342 Phosphoglucose isomerase 77 426 3.9E-25 T 26-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 smi_0157 7519ba4c2e28155ebf7ad43039261faf 449 Gene3D G3DSA:3.40.50.10490 71 200 3.9E-26 T 26-04-2016 smi_0157 7519ba4c2e28155ebf7ad43039261faf 449 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 409 426 - T 26-04-2016 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 smi_0157 7519ba4c2e28155ebf7ad43039261faf 449 SUPERFAMILY SSF53697 5 448 1.81E-135 T 26-04-2016 smi_0159 536584abe77ef5e04f5d4b193d74f345 144 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 56 101 - T 26-04-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 smi_0159 536584abe77ef5e04f5d4b193d74f345 144 SUPERFAMILY SSF53927 3 137 2.32E-25 T 26-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 smi_0159 536584abe77ef5e04f5d4b193d74f345 144 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 27 106 2.0E-5 T 26-04-2016 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 smi_0159 536584abe77ef5e04f5d4b193d74f345 144 Gene3D G3DSA:3.40.140.10 1 141 6.0E-38 T 26-04-2016 smi_2088 321a2eae56a4975f00db9c92e8263eb6 393 SUPERFAMILY SSF50494 58 286 6.85E-57 T 26-04-2016 IPR009003 Peptidase S1, PA clan smi_2088 321a2eae56a4975f00db9c92e8263eb6 393 SMART SM00228 289 375 7.0E-7 T 26-04-2016 IPR001478 PDZ domain GO:0005515 smi_2088 321a2eae56a4975f00db9c92e8263eb6 393 PRINTS PR00834 HtrA/DegQ protease family signature 115 127 1.8E-34 T 26-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 smi_2088 321a2eae56a4975f00db9c92e8263eb6 393 PRINTS PR00834 HtrA/DegQ protease family signature 136 156 1.8E-34 T 26-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 smi_2088 321a2eae56a4975f00db9c92e8263eb6 393 PRINTS PR00834 HtrA/DegQ protease family signature 177 201 1.8E-34 T 26-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 smi_2088 321a2eae56a4975f00db9c92e8263eb6 393 PRINTS PR00834 HtrA/DegQ protease family signature 241 258 1.8E-34 T 26-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 smi_2088 321a2eae56a4975f00db9c92e8263eb6 393 PRINTS PR00834 HtrA/DegQ protease family signature 333 345 1.8E-34 T 26-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 smi_2088 321a2eae56a4975f00db9c92e8263eb6 393 PRINTS PR00834 HtrA/DegQ protease family signature 219 236 1.8E-34 T 26-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 smi_2088 321a2eae56a4975f00db9c92e8263eb6 393 Pfam PF13365 Trypsin-like peptidase domain 103 248 2.6E-30 T 26-04-2016 smi_2088 321a2eae56a4975f00db9c92e8263eb6 393 SUPERFAMILY SSF50156 317 388 6.7E-17 T 26-04-2016 IPR001478 PDZ domain GO:0005515 smi_2088 321a2eae56a4975f00db9c92e8263eb6 393 Pfam PF13180 PDZ domain 289 384 1.3E-24 T 26-04-2016 IPR001478 PDZ domain GO:0005515 smi_2088 321a2eae56a4975f00db9c92e8263eb6 393 Gene3D G3DSA:2.40.10.10 178 290 1.5E-42 T 26-04-2016 smi_2088 321a2eae56a4975f00db9c92e8263eb6 393 PANTHER PTHR22939:SF79 14 388 3.5E-110 T 26-04-2016 smi_2088 321a2eae56a4975f00db9c92e8263eb6 393 PANTHER PTHR22939 14 388 3.5E-110 T 26-04-2016 smi_2088 321a2eae56a4975f00db9c92e8263eb6 393 Gene3D G3DSA:2.30.42.10 291 389 4.0E-21 T 26-04-2016 IPR001478 PDZ domain GO:0005515 smi_2088 321a2eae56a4975f00db9c92e8263eb6 393 Gene3D G3DSA:2.40.10.10 97 177 3.5E-27 T 26-04-2016 smi_1508 4ace2a540e14b0efe55b3990605682cf 364 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 9 363 3.6E-116 T 26-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 smi_1508 4ace2a540e14b0efe55b3990605682cf 364 SUPERFAMILY SSF53383 26 363 1.03E-91 T 26-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase smi_1508 4ace2a540e14b0efe55b3990605682cf 364 PANTHER PTHR11808 1 363 3.6E-161 T 26-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 smi_1508 4ace2a540e14b0efe55b3990605682cf 364 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 189 203 - T 26-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 smi_1508 4ace2a540e14b0efe55b3990605682cf 364 PIRSF PIRSF001434 1 364 3.6E-115 T 26-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 smi_1508 4ace2a540e14b0efe55b3990605682cf 364 Gene3D G3DSA:3.90.1150.10 246 363 9.9E-36 T 26-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 smi_1508 4ace2a540e14b0efe55b3990605682cf 364 PANTHER PTHR11808:SF15 1 363 3.6E-161 T 26-04-2016 smi_1508 4ace2a540e14b0efe55b3990605682cf 364 Gene3D G3DSA:3.40.640.10 6 245 2.6E-79 T 26-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 smi_1376 c1909aa607c8ca2a62afddba597e8ac8 439 SMART SM00854 88 336 1.2E-85 T 26-04-2016 IPR019079 Capsule synthesis protein, CapA smi_1376 c1909aa607c8ca2a62afddba597e8ac8 439 Pfam PF09587 Bacterial capsule synthesis protein PGA_cap 89 336 2.3E-70 T 26-04-2016 IPR019079 Capsule synthesis protein, CapA smi_1376 c1909aa607c8ca2a62afddba597e8ac8 439 SUPERFAMILY SSF56300 88 364 3.21E-39 T 26-04-2016 IPR029052 Metallo-dependent phosphatase-like smi_1376 c1909aa607c8ca2a62afddba597e8ac8 439 Gene3D G3DSA:3.60.21.30 90 349 4.7E-19 T 26-04-2016 smi_1376 c1909aa607c8ca2a62afddba597e8ac8 439 PANTHER PTHR33393 93 337 2.4E-42 T 26-04-2016 smi_1376 c1909aa607c8ca2a62afddba597e8ac8 439 PANTHER PTHR33393:SF2 93 337 2.4E-42 T 26-04-2016 smi_0686 31601e809191bf9c0165d5a92a055baf 388 Gene3D G3DSA:3.30.420.10 209 358 1.3E-5 T 26-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 smi_0686 31601e809191bf9c0165d5a92a055baf 388 SUPERFAMILY SSF53098 207 358 2.88E-9 T 26-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 smi_0686 31601e809191bf9c0165d5a92a055baf 388 PANTHER PTHR10948 1 372 3.1E-15 T 26-04-2016 smi_0686 31601e809191bf9c0165d5a92a055baf 388 Pfam PF13936 Helix-turn-helix domain 4 47 1.4E-16 T 26-04-2016 IPR025246 Transposase IS30-like HTH domain smi_0301 31601e809191bf9c0165d5a92a055baf 388 Gene3D G3DSA:3.30.420.10 209 358 1.3E-5 T 26-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 smi_0301 31601e809191bf9c0165d5a92a055baf 388 SUPERFAMILY SSF53098 207 358 2.88E-9 T 26-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 smi_0301 31601e809191bf9c0165d5a92a055baf 388 PANTHER PTHR10948 1 372 3.1E-15 T 26-04-2016 smi_0301 31601e809191bf9c0165d5a92a055baf 388 Pfam PF13936 Helix-turn-helix domain 4 47 1.4E-16 T 26-04-2016 IPR025246 Transposase IS30-like HTH domain smi_0637 d5d5c8be0a141b543e850ea3c711596f 397 Gene3D G3DSA:1.20.1250.20 2 186 4.9E-15 T 26-04-2016 smi_0637 d5d5c8be0a141b543e850ea3c711596f 397 Gene3D G3DSA:1.20.1250.20 212 393 2.0E-16 T 26-04-2016 smi_0637 d5d5c8be0a141b543e850ea3c711596f 397 SUPERFAMILY SSF103473 2 390 2.75E-44 T 26-04-2016 IPR020846 Major facilitator superfamily domain smi_0637 d5d5c8be0a141b543e850ea3c711596f 397 Pfam PF05977 Transmembrane secretion effector 4 395 3.1E-36 T 26-04-2016 IPR010290 Transmembrane secretion effector smi_0637 d5d5c8be0a141b543e850ea3c711596f 397 PANTHER PTHR23513 1 375 3.5E-67 T 26-04-2016 smi_0259 2af50c2e6ffd8dc16999eb0db33ae680 199 SUPERFAMILY SSF52172 1 132 3.27E-30 T 26-04-2016 IPR011006 CheY-like superfamily smi_0259 2af50c2e6ffd8dc16999eb0db33ae680 199 Gene3D G3DSA:1.10.10.10 143 199 1.3E-24 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain smi_0259 2af50c2e6ffd8dc16999eb0db33ae680 199 PANTHER PTHR26402 1 199 3.6E-130 T 26-04-2016 smi_0259 2af50c2e6ffd8dc16999eb0db33ae680 199 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 153 169 5.0E-12 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 smi_0259 2af50c2e6ffd8dc16999eb0db33ae680 199 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 139 153 5.0E-12 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 smi_0259 2af50c2e6ffd8dc16999eb0db33ae680 199 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 169 181 5.0E-12 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 smi_0259 2af50c2e6ffd8dc16999eb0db33ae680 199 PANTHER PTHR26402:SF580 1 199 3.6E-130 T 26-04-2016 smi_0259 2af50c2e6ffd8dc16999eb0db33ae680 199 SMART SM00421 136 193 1.1E-23 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 smi_0259 2af50c2e6ffd8dc16999eb0db33ae680 199 Gene3D G3DSA:3.40.50.2300 1 142 2.7E-32 T 26-04-2016 smi_0259 2af50c2e6ffd8dc16999eb0db33ae680 199 SMART SM00448 1 114 4.6E-26 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 smi_0259 2af50c2e6ffd8dc16999eb0db33ae680 199 SUPERFAMILY SSF46894 124 199 2.99E-20 T 26-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 smi_0259 2af50c2e6ffd8dc16999eb0db33ae680 199 ProSitePatterns PS00622 LuxR-type HTH domain signature. 153 180 - T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 smi_0259 2af50c2e6ffd8dc16999eb0db33ae680 199 Pfam PF00072 Response regulator receiver domain 4 114 5.1E-24 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 smi_0259 2af50c2e6ffd8dc16999eb0db33ae680 199 Pfam PF00196 Bacterial regulatory proteins, luxR family 138 193 6.7E-19 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 smi_0538 63c18a87a222f646d1ba323487bf5bb7 230 PANTHER PTHR30576 1 181 2.4E-91 T 26-04-2016 smi_0538 63c18a87a222f646d1ba323487bf5bb7 230 PANTHER PTHR30576 198 230 2.4E-91 T 26-04-2016 smi_0538 63c18a87a222f646d1ba323487bf5bb7 230 Pfam PF02397 Bacterial sugar transferase 33 229 2.6E-54 T 26-04-2016 IPR003362 Bacterial sugar transferase smi_0219 415f08c08c8e98b363716108184e3efd 485 PANTHER PTHR33843:SF5 2 409 5.7E-115 T 26-04-2016 smi_0219 415f08c08c8e98b363716108184e3efd 485 PANTHER PTHR33843 2 409 5.7E-115 T 26-04-2016 smi_0219 415f08c08c8e98b363716108184e3efd 485 Pfam PF03611 PTS system sugar-specific permease component 14 431 6.5E-113 T 26-04-2016 IPR004703 Phosphotransferase system, sugar-specific permease component GO:0009401|GO:0016021 smi_1210 569b7bf67d8accbdb562b7bc61a581f7 232 Hamap MF_00104 Ribonuclease 3 [rnc]. 8 224 30.735 T 26-04-2016 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 smi_1210 569b7bf67d8accbdb562b7bc61a581f7 232 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 9 226 1.8E-82 T 26-04-2016 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 smi_1210 569b7bf67d8accbdb562b7bc61a581f7 232 SMART SM00535 20 155 2.1E-59 T 26-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 smi_1210 569b7bf67d8accbdb562b7bc61a581f7 232 SMART SM00358 161 228 1.6E-18 T 26-04-2016 IPR014720 Double-stranded RNA-binding domain smi_1210 569b7bf67d8accbdb562b7bc61a581f7 232 Pfam PF14622 Ribonuclease-III-like 18 148 2.0E-37 T 26-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 smi_1210 569b7bf67d8accbdb562b7bc61a581f7 232 SUPERFAMILY SSF69065 6 163 2.62E-50 T 26-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 smi_1210 569b7bf67d8accbdb562b7bc61a581f7 232 ProSitePatterns PS00517 Ribonuclease III family signature. 44 52 - T 26-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 smi_1210 569b7bf67d8accbdb562b7bc61a581f7 232 PANTHER PTHR11207 8 226 1.6E-86 T 26-04-2016 smi_1210 569b7bf67d8accbdb562b7bc61a581f7 232 Gene3D G3DSA:1.10.1520.10 8 151 1.8E-46 T 26-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 smi_1210 569b7bf67d8accbdb562b7bc61a581f7 232 Gene3D G3DSA:3.30.160.20 160 226 1.1E-28 T 26-04-2016 IPR014720 Double-stranded RNA-binding domain smi_1210 569b7bf67d8accbdb562b7bc61a581f7 232 SUPERFAMILY SSF54768 149 226 1.89E-22 T 26-04-2016 smi_1210 569b7bf67d8accbdb562b7bc61a581f7 232 Pfam PF00035 Double-stranded RNA binding motif 161 226 4.5E-18 T 26-04-2016 IPR014720 Double-stranded RNA-binding domain smi_2046 57ef867ffaaf9972507af0070e6e08a0 152 PANTHER PTHR40028 1 150 5.3E-76 T 26-04-2016 smi_2046 57ef867ffaaf9972507af0070e6e08a0 152 Pfam PF05848 Firmicute transcriptional repressor of class III stress genes (CtsR) 5 146 2.8E-48 T 26-04-2016 IPR008463 Transcriptional repressor of class III stress genes GO:0003677|GO:0006355|GO:0006950 smi_2046 57ef867ffaaf9972507af0070e6e08a0 152 PIRSF PIRSF010607 1 151 2.9E-65 T 26-04-2016 IPR008463 Transcriptional repressor of class III stress genes GO:0003677|GO:0006355|GO:0006950 smi_2046 57ef867ffaaf9972507af0070e6e08a0 152 PANTHER PTHR40028:SF1 1 150 5.3E-76 T 26-04-2016 smi_0855 3302c8e10dd606427c79685fb0833ef5 816 SUPERFAMILY SSF53098 7 193 8.44E-48 T 26-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 smi_0855 3302c8e10dd606427c79685fb0833ef5 816 SUPERFAMILY SSF52540 395 464 8.04E-23 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0855 3302c8e10dd606427c79685fb0833ef5 816 SUPERFAMILY SSF52540 615 767 8.04E-23 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0855 3302c8e10dd606427c79685fb0833ef5 816 SUPERFAMILY SSF52540 258 311 8.04E-23 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0855 3302c8e10dd606427c79685fb0833ef5 816 SUPERFAMILY SSF52540 569 583 8.04E-23 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0855 3302c8e10dd606427c79685fb0833ef5 816 Gene3D G3DSA:3.40.50.300 392 457 5.3E-18 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0855 3302c8e10dd606427c79685fb0833ef5 816 Gene3D G3DSA:3.40.50.300 246 326 5.3E-18 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0855 3302c8e10dd606427c79685fb0833ef5 816 Gene3D G3DSA:3.40.50.300 559 581 5.3E-18 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0855 3302c8e10dd606427c79685fb0833ef5 816 Gene3D G3DSA:3.30.420.10 5 171 1.3E-47 T 26-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 smi_0855 3302c8e10dd606427c79685fb0833ef5 816 Pfam PF00929 Exonuclease 9 162 2.0E-26 T 26-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III smi_0855 3302c8e10dd606427c79685fb0833ef5 816 TIGRFAM TIGR01407 dinG_rel: putative DnaQ family exonuclease/DinG family helicase 7 496 1.4E-212 T 26-04-2016 IPR006310 DnaQ exonuclease/DinG helicase, predicted smi_0855 3302c8e10dd606427c79685fb0833ef5 816 SMART SM00479 7 171 9.1E-38 T 26-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III smi_0855 3302c8e10dd606427c79685fb0833ef5 816 Gene3D G3DSA:3.40.50.300 745 775 2.7E-4 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0855 3302c8e10dd606427c79685fb0833ef5 816 Gene3D G3DSA:3.40.50.300 678 712 2.7E-4 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0855 3302c8e10dd606427c79685fb0833ef5 816 SMART SM00491 654 780 1.0E-9 T 26-04-2016 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 smi_0855 3302c8e10dd606427c79685fb0833ef5 816 PANTHER PTHR30231 4 463 3.3E-264 T 26-04-2016 smi_0855 3302c8e10dd606427c79685fb0833ef5 816 SMART SM00487 241 611 0.0013 T 26-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain smi_0855 3302c8e10dd606427c79685fb0833ef5 816 Pfam PF00270 DEAD/DEAH box helicase 265 316 2.8E-6 T 26-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 smi_0855 3302c8e10dd606427c79685fb0833ef5 816 PANTHER PTHR30231:SF8 4 463 3.3E-264 T 26-04-2016 smi_0855 3302c8e10dd606427c79685fb0833ef5 816 Pfam PF13307 Helicase C-terminal domain 643 792 2.9E-23 T 26-04-2016 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 smi_0855 3302c8e10dd606427c79685fb0833ef5 816 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 7 172 4.6E-28 T 26-04-2016 IPR006054 DNA polymerase III, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 smi_1849 339316fc8e004d64d86df422dfced06a 349 SUPERFAMILY SSF51679 21 341 9.16E-73 T 26-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 smi_1849 339316fc8e004d64d86df422dfced06a 349 PANTHER PTHR30137:SF8 1 349 1.3E-157 T 26-04-2016 smi_1849 339316fc8e004d64d86df422dfced06a 349 Pfam PF00296 Luciferase-like monooxygenase 20 309 7.7E-41 T 26-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 smi_1849 339316fc8e004d64d86df422dfced06a 349 TIGRFAM TIGR03858 LLM_2I7G: probable oxidoreductase, LLM family 3 341 1.0E-156 T 26-04-2016 IPR022290 Conserved hypothetical protein CHP03858, luciferase-like monooxygenase, putative smi_1849 339316fc8e004d64d86df422dfced06a 349 PANTHER PTHR30137 1 349 1.3E-157 T 26-04-2016 smi_1849 339316fc8e004d64d86df422dfced06a 349 Gene3D G3DSA:3.20.20.30 3 345 2.2E-84 T 26-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 smi_0110 9f475a1fa844e2b5918f31978c714dc3 448 PANTHER PTHR33843:SF4 1 448 5.9E-265 T 26-04-2016 smi_0110 9f475a1fa844e2b5918f31978c714dc3 448 PANTHER PTHR33843 1 448 5.9E-265 T 26-04-2016 smi_0110 9f475a1fa844e2b5918f31978c714dc3 448 Pfam PF03611 PTS system sugar-specific permease component 7 403 4.0E-147 T 26-04-2016 IPR004703 Phosphotransferase system, sugar-specific permease component GO:0009401|GO:0016021 smi_1899 6f09b03e832b1209a83c840f5dd1c2fc 217 PANTHER PTHR11760:SF19 2 214 9.9E-132 T 26-04-2016 smi_1899 6f09b03e832b1209a83c840f5dd1c2fc 217 Pfam PF07650 KH domain 38 109 1.5E-20 T 26-04-2016 IPR004044 K Homology domain, type 2 GO:0003723 smi_1899 6f09b03e832b1209a83c840f5dd1c2fc 217 SUPERFAMILY SSF54821 106 205 4.97E-37 T 26-04-2016 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 smi_1899 6f09b03e832b1209a83c840f5dd1c2fc 217 SMART SM00322 59 124 1.7E-8 T 26-04-2016 IPR004087 K Homology domain GO:0003676 smi_1899 6f09b03e832b1209a83c840f5dd1c2fc 217 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 205 38.004 T 26-04-2016 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 smi_1899 6f09b03e832b1209a83c840f5dd1c2fc 217 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 207 9.7E-92 T 26-04-2016 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 smi_1899 6f09b03e832b1209a83c840f5dd1c2fc 217 SUPERFAMILY SSF54814 2 105 1.65E-37 T 26-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 smi_1899 6f09b03e832b1209a83c840f5dd1c2fc 217 PANTHER PTHR11760 2 214 9.9E-132 T 26-04-2016 smi_1899 6f09b03e832b1209a83c840f5dd1c2fc 217 Pfam PF00189 Ribosomal protein S3, C-terminal domain 119 201 2.0E-39 T 26-04-2016 smi_1899 6f09b03e832b1209a83c840f5dd1c2fc 217 Gene3D G3DSA:3.30.300.20 17 106 1.2E-33 T 26-04-2016 IPR015946 K homology domain-like, alpha/beta smi_1899 6f09b03e832b1209a83c840f5dd1c2fc 217 ProSitePatterns PS00548 Ribosomal protein S3 signature. 162 196 - T 26-04-2016 IPR018280 Ribosomal protein S3, conserved site smi_1899 6f09b03e832b1209a83c840f5dd1c2fc 217 Gene3D G3DSA:3.30.1140.32 108 206 5.6E-43 T 26-04-2016 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 smi_1655 ad58b28d4bbbb366710fd831d1fbdcda 398 PANTHER PTHR13778 5 244 9.4E-19 T 26-04-2016 smi_1655 ad58b28d4bbbb366710fd831d1fbdcda 398 Pfam PF01501 Glycosyl transferase family 8 5 231 1.8E-43 T 26-04-2016 IPR002495 Glycosyl transferase, family 8 GO:0016757 smi_1655 ad58b28d4bbbb366710fd831d1fbdcda 398 PANTHER PTHR13778:SF1 5 244 9.4E-19 T 26-04-2016 smi_1655 ad58b28d4bbbb366710fd831d1fbdcda 398 SUPERFAMILY SSF53448 5 252 4.22E-63 T 26-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases smi_1655 ad58b28d4bbbb366710fd831d1fbdcda 398 Gene3D G3DSA:3.90.550.10 5 251 9.9E-68 T 26-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases smi_0924 d5e1fd7247efdc6df937eec0e0df8605 325 SUPERFAMILY SSF55347 148 289 1.06E-14 T 26-04-2016 smi_0924 d5e1fd7247efdc6df937eec0e0df8605 325 SUPERFAMILY SSF51735 2 134 1.98E-35 T 26-04-2016 IPR016040 NAD(P)-binding domain smi_0924 d5e1fd7247efdc6df937eec0e0df8605 325 Gene3D G3DSA:3.30.360.10 140 325 2.6E-58 T 26-04-2016 smi_0924 d5e1fd7247efdc6df937eec0e0df8605 325 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 3 116 4.1E-23 T 26-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 smi_0924 d5e1fd7247efdc6df937eec0e0df8605 325 Gene3D G3DSA:3.40.50.720 1 139 6.5E-34 T 26-04-2016 IPR016040 NAD(P)-binding domain smi_0924 d5e1fd7247efdc6df937eec0e0df8605 325 PANTHER PTHR22604:SF76 1 315 5.5E-127 T 26-04-2016 smi_0924 d5e1fd7247efdc6df937eec0e0df8605 325 PANTHER PTHR22604 1 315 5.5E-127 T 26-04-2016 smi_0230 9200fe6d659b76bcb55bbf387dc10a79 136 PANTHER PTHR23084 42 134 4.5E-23 T 26-04-2016 smi_0230 9200fe6d659b76bcb55bbf387dc10a79 136 PIRSF PIRSF034300 1 136 2.0E-60 T 26-04-2016 IPR014590 Uncharacterised conserved protein MORN repeat-containing smi_0230 9200fe6d659b76bcb55bbf387dc10a79 136 SUPERFAMILY SSF82185 42 131 1.83E-21 T 26-04-2016 smi_0230 9200fe6d659b76bcb55bbf387dc10a79 136 SMART SM00698 99 120 2.4 T 26-04-2016 IPR003409 MORN motif smi_0230 9200fe6d659b76bcb55bbf387dc10a79 136 SMART SM00698 76 97 0.96 T 26-04-2016 IPR003409 MORN motif smi_0230 9200fe6d659b76bcb55bbf387dc10a79 136 SMART SM00698 53 74 0.17 T 26-04-2016 IPR003409 MORN motif smi_0230 9200fe6d659b76bcb55bbf387dc10a79 136 Gene3D G3DSA:2.20.110.10 42 133 8.6E-24 T 26-04-2016 smi_0230 9200fe6d659b76bcb55bbf387dc10a79 136 Pfam PF02493 MORN repeat 55 76 1.8E-5 T 26-04-2016 IPR003409 MORN motif smi_0230 9200fe6d659b76bcb55bbf387dc10a79 136 Pfam PF02493 MORN repeat 101 117 2.5E-4 T 26-04-2016 IPR003409 MORN motif smi_0230 9200fe6d659b76bcb55bbf387dc10a79 136 Pfam PF02493 MORN repeat 78 98 0.0096 T 26-04-2016 IPR003409 MORN motif smi_0230 9200fe6d659b76bcb55bbf387dc10a79 136 Pfam PF02493 MORN repeat 124 133 16.0 T 26-04-2016 IPR003409 MORN motif smi_0234 5570d6569d801b299e5551e3ac81bed0 733 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 111 652 5.1E-161 T 26-04-2016 smi_0234 5570d6569d801b299e5551e3ac81bed0 733 Pfam PF00912 Transglycosylase 106 270 5.5E-58 T 26-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 smi_0234 5570d6569d801b299e5551e3ac81bed0 733 Gene3D G3DSA:1.10.3810.10 103 272 4.1E-66 T 26-04-2016 smi_0234 5570d6569d801b299e5551e3ac81bed0 733 PANTHER PTHR32282 28 652 2.1E-205 T 26-04-2016 smi_0234 5570d6569d801b299e5551e3ac81bed0 733 SUPERFAMILY SSF56601 252 274 3.52E-92 T 26-04-2016 IPR012338 Beta-lactamase/transpeptidase-like smi_0234 5570d6569d801b299e5551e3ac81bed0 733 SUPERFAMILY SSF56601 307 662 3.52E-92 T 26-04-2016 IPR012338 Beta-lactamase/transpeptidase-like smi_0234 5570d6569d801b299e5551e3ac81bed0 733 Pfam PF00905 Penicillin binding protein transpeptidase domain 371 647 7.0E-34 T 26-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 smi_0234 5570d6569d801b299e5551e3ac81bed0 733 Gene3D G3DSA:3.40.710.10 273 682 6.1E-95 T 26-04-2016 IPR012338 Beta-lactamase/transpeptidase-like smi_0234 5570d6569d801b299e5551e3ac81bed0 733 SUPERFAMILY SSF53955 90 293 5.91E-64 T 26-04-2016 IPR023346 Lysozyme-like domain smi_0234 5570d6569d801b299e5551e3ac81bed0 733 PANTHER PTHR32282:SF5 28 652 2.1E-205 T 26-04-2016 smi_0821 5da9d831108b35711d4cb92a9af8a3c9 513 Gene3D G3DSA:3.40.50.300 123 278 2.4E-49 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0821 5da9d831108b35711d4cb92a9af8a3c9 513 Gene3D G3DSA:3.40.50.300 2 90 2.4E-49 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0821 5da9d831108b35711d4cb92a9af8a3c9 513 Gene3D G3DSA:3.40.50.300 325 510 7.6E-36 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0821 5da9d831108b35711d4cb92a9af8a3c9 513 SUPERFAMILY SSF52540 305 510 7.01E-37 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0821 5da9d831108b35711d4cb92a9af8a3c9 513 PANTHER PTHR19211:SF65 1 508 0.0 T 26-04-2016 smi_0821 5da9d831108b35711d4cb92a9af8a3c9 513 PANTHER PTHR19211 1 508 0.0 T 26-04-2016 smi_0821 5da9d831108b35711d4cb92a9af8a3c9 513 Pfam PF00005 ABC transporter 20 190 7.1E-24 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 smi_0821 5da9d831108b35711d4cb92a9af8a3c9 513 Pfam PF00005 ABC transporter 340 468 1.9E-19 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 smi_0821 5da9d831108b35711d4cb92a9af8a3c9 513 SMART SM00382 28 237 2.5E-7 T 26-04-2016 IPR003593 AAA+ ATPase domain smi_0821 5da9d831108b35711d4cb92a9af8a3c9 513 SMART SM00382 348 513 1.1E-9 T 26-04-2016 IPR003593 AAA+ ATPase domain smi_0821 5da9d831108b35711d4cb92a9af8a3c9 513 Pfam PF12848 ABC transporter 229 314 1.1E-20 T 26-04-2016 IPR032781 ABC-transporter extension domain smi_0821 5da9d831108b35711d4cb92a9af8a3c9 513 ProSitePatterns PS00211 ABC transporters family signature. 440 454 - T 26-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 smi_0821 5da9d831108b35711d4cb92a9af8a3c9 513 ProSitePatterns PS00211 ABC transporters family signature. 162 176 - T 26-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 smi_0821 5da9d831108b35711d4cb92a9af8a3c9 513 SUPERFAMILY SSF52540 4 243 4.25E-46 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0316 5029a6563de216a90ab56932859c673a 345 PANTHER PTHR10046:SF48 206 293 5.7E-48 T 26-04-2016 smi_0316 5029a6563de216a90ab56932859c673a 345 PANTHER PTHR10046:SF48 309 345 5.7E-48 T 26-04-2016 smi_0316 5029a6563de216a90ab56932859c673a 345 Gene3D G3DSA:3.30.230.10 219 341 6.1E-22 T 26-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup smi_0316 5029a6563de216a90ab56932859c673a 345 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 230 297 7.6E-6 T 26-04-2016 IPR008269 Peptidase S16, Lon C-terminal GO:0004176|GO:0004252|GO:0006508 smi_0316 5029a6563de216a90ab56932859c673a 345 Gene3D G3DSA:2.30.42.10 129 191 1.7E-8 T 26-04-2016 IPR001478 PDZ domain GO:0005515 smi_0316 5029a6563de216a90ab56932859c673a 345 SUPERFAMILY SSF54211 159 341 2.5E-23 T 26-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold smi_0316 5029a6563de216a90ab56932859c673a 345 PANTHER PTHR10046 206 293 5.7E-48 T 26-04-2016 IPR027065 Lon protease GO:0004176|GO:0004252|GO:0005524|GO:0030163 smi_0316 5029a6563de216a90ab56932859c673a 345 PANTHER PTHR10046 309 345 5.7E-48 T 26-04-2016 IPR027065 Lon protease GO:0004176|GO:0004252|GO:0005524|GO:0030163 smi_0316 5029a6563de216a90ab56932859c673a 345 Pfam PF13180 PDZ domain 129 193 2.9E-10 T 26-04-2016 IPR001478 PDZ domain GO:0005515 smi_1104 c6782e39ad6fd6c053de9d5d78029ccc 581 Gene3D G3DSA:3.20.20.80 130 506 1.2E-119 T 26-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 smi_1104 c6782e39ad6fd6c053de9d5d78029ccc 581 SUPERFAMILY SSF81296 1 126 7.56E-38 T 26-04-2016 IPR014756 Immunoglobulin E-set smi_1104 c6782e39ad6fd6c053de9d5d78029ccc 581 PANTHER PTHR10357:SF10 68 155 4.2E-203 T 26-04-2016 smi_1104 c6782e39ad6fd6c053de9d5d78029ccc 581 PANTHER PTHR10357:SF10 172 580 4.2E-203 T 26-04-2016 smi_1104 c6782e39ad6fd6c053de9d5d78029ccc 581 SUPERFAMILY SSF51445 120 506 2.23E-114 T 26-04-2016 IPR017853 Glycoside hydrolase superfamily smi_1104 c6782e39ad6fd6c053de9d5d78029ccc 581 Pfam PF02903 Alpha amylase, N-terminal ig-like domain 1 123 2.4E-38 T 26-04-2016 IPR004185 Glycoside hydrolase, family 13, N-terminal Ig-like domain GO:0004553|GO:0005975 smi_1104 c6782e39ad6fd6c053de9d5d78029ccc 581 SMART SM00642 141 505 1.5E-115 T 26-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 smi_1104 c6782e39ad6fd6c053de9d5d78029ccc 581 Pfam PF00128 Alpha amylase, catalytic domain 176 477 6.5E-79 T 26-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 smi_1104 c6782e39ad6fd6c053de9d5d78029ccc 581 Gene3D G3DSA:2.60.40.10 1 126 1.0E-43 T 26-04-2016 IPR013783 Immunoglobulin-like fold smi_1104 c6782e39ad6fd6c053de9d5d78029ccc 581 PANTHER PTHR10357 68 155 4.2E-203 T 26-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 smi_1104 c6782e39ad6fd6c053de9d5d78029ccc 581 PANTHER PTHR10357 172 580 4.2E-203 T 26-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 smi_0980 5ec50e61c0a7c7ea634520f9926f635a 317 PANTHER PTHR41265 1 317 1.4E-111 T 26-04-2016 smi_0980 5ec50e61c0a7c7ea634520f9926f635a 317 PIRSF PIRSF007487 1 317 1.9E-106 T 26-04-2016 IPR021176 Competence-induced protein CoiA-like, bacterial smi_0980 5ec50e61c0a7c7ea634520f9926f635a 317 Pfam PF06054 Competence protein CoiA-like family 8 256 3.1E-41 T 26-04-2016 IPR010330 Competence-induced protein CoiA-like smi_0980 5ec50e61c0a7c7ea634520f9926f635a 317 PANTHER PTHR41265:SF1 1 317 1.4E-111 T 26-04-2016 smi_0389 ebbfb0b0b98cb9dd77ae220b5d28b328 883 TIGRFAM TIGR00422 valS: valine--tRNA ligase 7 861 0.0 T 26-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 smi_0389 ebbfb0b0b98cb9dd77ae220b5d28b328 883 SUPERFAMILY SSF47323 571 829 5.61E-66 T 26-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 smi_0389 ebbfb0b0b98cb9dd77ae220b5d28b328 883 SUPERFAMILY SSF46589 814 877 8.37E-16 T 26-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 smi_0389 ebbfb0b0b98cb9dd77ae220b5d28b328 883 PANTHER PTHR11946 1 790 0.0 T 26-04-2016 smi_0389 ebbfb0b0b98cb9dd77ae220b5d28b328 883 PANTHER PTHR11946 810 872 0.0 T 26-04-2016 smi_0389 ebbfb0b0b98cb9dd77ae220b5d28b328 883 Pfam PF08264 Anticodon-binding domain of tRNA 610 754 6.5E-40 T 26-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 smi_0389 ebbfb0b0b98cb9dd77ae220b5d28b328 883 SUPERFAMILY SSF52374 5 195 3.84E-139 T 26-04-2016 smi_0389 ebbfb0b0b98cb9dd77ae220b5d28b328 883 SUPERFAMILY SSF52374 343 570 3.84E-139 T 26-04-2016 smi_0389 ebbfb0b0b98cb9dd77ae220b5d28b328 883 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 436 560 7.0E-54 T 26-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 smi_0389 ebbfb0b0b98cb9dd77ae220b5d28b328 883 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 18 430 2.1E-160 T 26-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 smi_0389 ebbfb0b0b98cb9dd77ae220b5d28b328 883 Hamap MF_02004 Valine--tRNA ligase [valS]. 5 879 15.689 T 26-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 smi_0389 ebbfb0b0b98cb9dd77ae220b5d28b328 883 PRINTS PR00986 Valyl-tRNA synthetase signature 472 490 4.9E-37 T 26-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 smi_0389 ebbfb0b0b98cb9dd77ae220b5d28b328 883 PRINTS PR00986 Valyl-tRNA synthetase signature 39 50 4.9E-37 T 26-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 smi_0389 ebbfb0b0b98cb9dd77ae220b5d28b328 883 PRINTS PR00986 Valyl-tRNA synthetase signature 348 361 4.9E-37 T 26-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 smi_0389 ebbfb0b0b98cb9dd77ae220b5d28b328 883 PRINTS PR00986 Valyl-tRNA synthetase signature 233 250 4.9E-37 T 26-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 smi_0389 ebbfb0b0b98cb9dd77ae220b5d28b328 883 PRINTS PR00986 Valyl-tRNA synthetase signature 440 461 4.9E-37 T 26-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 smi_0389 ebbfb0b0b98cb9dd77ae220b5d28b328 883 Gene3D G3DSA:1.10.287.380 807 866 1.6E-5 T 26-04-2016 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 smi_0389 ebbfb0b0b98cb9dd77ae220b5d28b328 883 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 46 57 - T 26-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 smi_0389 ebbfb0b0b98cb9dd77ae220b5d28b328 883 Gene3D G3DSA:1.10.730.10 560 745 5.1E-55 T 26-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 smi_0389 ebbfb0b0b98cb9dd77ae220b5d28b328 883 PANTHER PTHR11946:SF5 1 790 0.0 T 26-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 smi_0389 ebbfb0b0b98cb9dd77ae220b5d28b328 883 PANTHER PTHR11946:SF5 810 872 0.0 T 26-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 smi_0389 ebbfb0b0b98cb9dd77ae220b5d28b328 883 Gene3D G3DSA:3.40.50.620 8 196 2.4E-139 T 26-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold smi_0389 ebbfb0b0b98cb9dd77ae220b5d28b328 883 Gene3D G3DSA:3.40.50.620 343 559 2.4E-139 T 26-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold smi_0389 ebbfb0b0b98cb9dd77ae220b5d28b328 883 Gene3D G3DSA:3.90.740.10 197 338 8.3E-49 T 26-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 smi_0389 ebbfb0b0b98cb9dd77ae220b5d28b328 883 SUPERFAMILY SSF50677 193 344 1.7E-60 T 26-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 smi_0389 ebbfb0b0b98cb9dd77ae220b5d28b328 883 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 814 879 5.9E-17 T 26-04-2016 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 smi_1181 3e053e62e8dc37a23c3e1fdcce4147ff 272 Hamap MF_00361 NAD kinase [nadK]. 6 268 24.751 T 26-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 smi_1181 3e053e62e8dc37a23c3e1fdcce4147ff 272 SUPERFAMILY SSF111331 29 266 1.18E-62 T 26-04-2016 IPR016064 NAD kinase/diacylglycerol kinase-like domain smi_1181 3e053e62e8dc37a23c3e1fdcce4147ff 272 PANTHER PTHR20275 31 264 3.6E-60 T 26-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 smi_1181 3e053e62e8dc37a23c3e1fdcce4147ff 272 Gene3D G3DSA:2.60.200.30 123 241 4.0E-32 T 26-04-2016 IPR017437 ATP-NAD kinase, PpnK-type, all-beta GO:0003951|GO:0008152|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 smi_1181 3e053e62e8dc37a23c3e1fdcce4147ff 272 Gene3D G3DSA:3.40.50.10330 31 122 5.9E-19 T 26-04-2016 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 GO:0003951|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 smi_1181 3e053e62e8dc37a23c3e1fdcce4147ff 272 Pfam PF01513 ATP-NAD kinase 38 225 5.7E-20 T 26-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 smi_1960 8fcf2b59a52336d021b90bb102a152fb 559 PIRSF PIRSF004803 1 556 8.9E-222 T 26-04-2016 IPR030854 Ribonuclease J, bacteria GO:0004521|GO:0004534|GO:0006396|GO:0008270|GO:0090501 smi_1960 8fcf2b59a52336d021b90bb102a152fb 559 ProSitePatterns PS01292 Uncharacterized protein family UPF0036 signature. 365 393 - T 26-04-2016 IPR001587 Ribonuclease J, conserved site smi_1960 8fcf2b59a52336d021b90bb102a152fb 559 Gene3D G3DSA:3.60.15.10 7 256 4.6E-77 T 26-04-2016 IPR001279 Metallo-beta-lactamase smi_1960 8fcf2b59a52336d021b90bb102a152fb 559 Pfam PF00753 Metallo-beta-lactamase superfamily 20 168 5.6E-17 T 26-04-2016 IPR001279 Metallo-beta-lactamase smi_1960 8fcf2b59a52336d021b90bb102a152fb 559 SMART SM00849 22 216 7.8E-25 T 26-04-2016 IPR001279 Metallo-beta-lactamase smi_1960 8fcf2b59a52336d021b90bb102a152fb 559 SUPERFAMILY SSF56281 13 424 1.69E-91 T 26-04-2016 IPR001279 Metallo-beta-lactamase smi_1960 8fcf2b59a52336d021b90bb102a152fb 559 PANTHER PTHR11203:SF22 1 559 1.5E-237 T 26-04-2016 IPR004613 Ribonuclease J GO:0003723|GO:0046872 smi_1960 8fcf2b59a52336d021b90bb102a152fb 559 Hamap MF_01491 Ribonuclease J [rnj]. 5 556 45.062 T 26-04-2016 IPR030854 Ribonuclease J, bacteria GO:0004521|GO:0004534|GO:0006396|GO:0008270|GO:0090501 smi_1960 8fcf2b59a52336d021b90bb102a152fb 559 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 359 409 4.2E-11 T 26-04-2016 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain smi_1960 8fcf2b59a52336d021b90bb102a152fb 559 TIGRFAM TIGR00649 MG423: beta-CASP ribonuclease, RNase J family 11 553 3.6E-196 T 26-04-2016 IPR004613 Ribonuclease J GO:0003723|GO:0046872 smi_1960 8fcf2b59a52336d021b90bb102a152fb 559 PANTHER PTHR11203 1 559 1.5E-237 T 26-04-2016 smi_1201 38ea41fbef30bb2e8f7de369c5cd0d4d 662 SUPERFAMILY SSF52540 38 72 4.93E-36 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1201 38ea41fbef30bb2e8f7de369c5cd0d4d 662 SUPERFAMILY SSF52540 461 591 4.93E-36 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1201 38ea41fbef30bb2e8f7de369c5cd0d4d 662 SMART SM00490 464 550 2.8E-20 T 26-04-2016 IPR001650 Helicase, C-terminal smi_1201 38ea41fbef30bb2e8f7de369c5cd0d4d 662 Gene3D G3DSA:4.10.860.10 615 660 3.0E-11 T 26-04-2016 IPR001943 UVR domain GO:0005515 smi_1201 38ea41fbef30bb2e8f7de369c5cd0d4d 662 Pfam PF12344 Ultra-violet resistance protein B 556 598 1.7E-24 T 26-04-2016 IPR024759 UvrB, YAD/RRR-motif-containing domain smi_1201 38ea41fbef30bb2e8f7de369c5cd0d4d 662 SMART SM00487 14 430 6.5E-28 T 26-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain smi_1201 38ea41fbef30bb2e8f7de369c5cd0d4d 662 PANTHER PTHR24029 4 661 0.0 T 26-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 smi_1201 38ea41fbef30bb2e8f7de369c5cd0d4d 662 SUPERFAMILY SSF52540 8 419 2.11E-139 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1201 38ea41fbef30bb2e8f7de369c5cd0d4d 662 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 9 659 0.0 T 26-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 smi_1201 38ea41fbef30bb2e8f7de369c5cd0d4d 662 Gene3D G3DSA:3.40.50.300 423 586 4.9E-40 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1201 38ea41fbef30bb2e8f7de369c5cd0d4d 662 SUPERFAMILY SSF46600 617 660 8.5E-9 T 26-04-2016 IPR001943 UVR domain GO:0005515 smi_1201 38ea41fbef30bb2e8f7de369c5cd0d4d 662 Pfam PF04851 Type III restriction enzyme, res subunit 17 143 2.3E-12 T 26-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 smi_1201 38ea41fbef30bb2e8f7de369c5cd0d4d 662 Pfam PF00271 Helicase conserved C-terminal domain 439 549 1.2E-19 T 26-04-2016 IPR001650 Helicase, C-terminal smi_1201 38ea41fbef30bb2e8f7de369c5cd0d4d 662 Hamap MF_00204 UvrABC system protein B [uvrB]. 8 661 43.833 T 26-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 smi_1201 38ea41fbef30bb2e8f7de369c5cd0d4d 662 Gene3D G3DSA:3.30.2060.10 164 235 7.0E-12 T 26-04-2016 smi_1201 38ea41fbef30bb2e8f7de369c5cd0d4d 662 Gene3D G3DSA:3.40.50.300 10 160 5.1E-37 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1201 38ea41fbef30bb2e8f7de369c5cd0d4d 662 Gene3D G3DSA:3.40.50.300 236 343 5.7E-17 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1201 38ea41fbef30bb2e8f7de369c5cd0d4d 662 Gene3D G3DSA:3.40.50.300 393 414 5.7E-17 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1201 38ea41fbef30bb2e8f7de369c5cd0d4d 662 Pfam PF02151 UvrB/uvrC motif 626 660 2.6E-10 T 26-04-2016 IPR001943 UVR domain GO:0005515 smi_0626 f495a6f5373d30d6b9a0126b59c6a64d 291 TIGRFAM TIGR03544 DivI1A_domain: DivIVA domain 3 36 8.6E-14 T 26-04-2016 IPR019933 DivIVA domain smi_0626 f495a6f5373d30d6b9a0126b59c6a64d 291 Pfam PF05103 DivIVA protein 3 144 2.8E-38 T 26-04-2016 IPR007793 DivIVA family smi_0626 f495a6f5373d30d6b9a0126b59c6a64d 291 PANTHER PTHR35794:SF2 1 256 8.9E-90 T 26-04-2016 smi_0626 f495a6f5373d30d6b9a0126b59c6a64d 291 PANTHER PTHR35794 1 256 8.9E-90 T 26-04-2016 smi_1766 3c997270304ef7f92cb75d052fa7feeb 326 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 46 58 6.5E-6 T 26-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 smi_1766 3c997270304ef7f92cb75d052fa7feeb 326 PANTHER PTHR22926 1 325 1.7E-132 T 26-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 smi_1766 3c997270304ef7f92cb75d052fa7feeb 326 Pfam PF00953 Glycosyl transferase family 4 81 242 2.7E-39 T 26-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 smi_1766 3c997270304ef7f92cb75d052fa7feeb 326 PANTHER PTHR22926:SF5 1 325 1.7E-132 T 26-04-2016 smi_1766 3c997270304ef7f92cb75d052fa7feeb 326 ProSitePatterns PS01347 MraY family signature 1. 46 58 - T 26-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 smi_1766 3c997270304ef7f92cb75d052fa7feeb 326 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 19 323 4.1E-80 T 26-04-2016 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 smi_1766 3c997270304ef7f92cb75d052fa7feeb 326 ProSitePatterns PS01348 MraY family signature 2. 162 173 - T 26-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 smi_1766 3c997270304ef7f92cb75d052fa7feeb 326 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 3 324 22.961 T 26-04-2016 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 smi_1651 e6f17ae426c27ca6c0d0800791090fc6 487 Gene3D G3DSA:3.40.50.1820 306 356 2.6E-4 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold smi_1651 e6f17ae426c27ca6c0d0800791090fc6 487 Pfam PF16929 Accessory Sec system GspB-transporter 1 484 1.1E-182 T 26-04-2016 IPR022267 Accessory Sec system protein Asp2 GO:0015031 smi_1651 e6f17ae426c27ca6c0d0800791090fc6 487 TIGRFAM TIGR03712 acc_sec_asp2: accessory Sec system protein Asp2 1 485 8.9E-219 T 26-04-2016 IPR022267 Accessory Sec system protein Asp2 GO:0015031 smi_1651 e6f17ae426c27ca6c0d0800791090fc6 487 SUPERFAMILY SSF53474 262 447 2.43E-5 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold smi_1807 f18efa0c1b188d56900cf2c38ce0bb24 187 PANTHER PTHR38438 1 187 6.3E-68 T 26-04-2016 smi_1807 f18efa0c1b188d56900cf2c38ce0bb24 187 PANTHER PTHR38438:SF1 1 187 6.3E-68 T 26-04-2016 smi_1807 f18efa0c1b188d56900cf2c38ce0bb24 187 PIRSF PIRSF037778 1 187 7.4E-70 T 26-04-2016 IPR025720 ECF transporter, Riboflavin transporter RibU GO:0005886|GO:0032217|GO:0032218 smi_1807 f18efa0c1b188d56900cf2c38ce0bb24 187 Pfam PF12822 Protein of unknown function (DUF3816) 5 175 1.6E-19 T 26-04-2016 IPR024529 ECF transporter, substrate-specific component GO:0005215 smi_0546 ba79c24cd304efca354d973554e6e687 407 Gene3D G3DSA:3.40.50.1100 181 397 1.5E-88 T 26-04-2016 smi_0546 ba79c24cd304efca354d973554e6e687 407 PANTHER PTHR10314 10 398 1.5E-237 T 26-04-2016 smi_0546 ba79c24cd304efca354d973554e6e687 407 PIRSF PIRSF001413 1 401 1.1E-166 T 26-04-2016 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 smi_0546 ba79c24cd304efca354d973554e6e687 407 Gene3D G3DSA:3.40.50.1100 101 180 3.8E-19 T 26-04-2016 smi_0546 ba79c24cd304efca354d973554e6e687 407 PANTHER PTHR10314:SF3 10 398 1.5E-237 T 26-04-2016 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 smi_0546 ba79c24cd304efca354d973554e6e687 407 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 10 393 3.3E-192 T 26-04-2016 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 smi_0546 ba79c24cd304efca354d973554e6e687 407 SUPERFAMILY SSF53686 6 391 4.19E-146 T 26-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme smi_0546 ba79c24cd304efca354d973554e6e687 407 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 5 395 52.465 T 26-04-2016 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 smi_0546 ba79c24cd304efca354d973554e6e687 407 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 84 98 - T 26-04-2016 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 smi_0546 ba79c24cd304efca354d973554e6e687 407 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 56 382 1.5E-49 T 26-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme smi_1925 a37bcbe7684f8131637a376fb90acb25 943 Pfam PF00005 ABC transporter 624 860 2.6E-10 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 smi_1925 a37bcbe7684f8131637a376fb90acb25 943 Gene3D G3DSA:3.40.50.300 615 669 2.9E-60 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1925 a37bcbe7684f8131637a376fb90acb25 943 Gene3D G3DSA:3.40.50.300 821 942 2.9E-60 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1925 a37bcbe7684f8131637a376fb90acb25 943 Gene3D G3DSA:3.40.50.300 480 598 1.9E-54 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1925 a37bcbe7684f8131637a376fb90acb25 943 Gene3D G3DSA:3.40.50.300 4 90 1.9E-54 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1925 a37bcbe7684f8131637a376fb90acb25 943 Gene3D G3DSA:3.30.1490.20 132 154 2.2E-30 T 26-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 smi_1925 a37bcbe7684f8131637a376fb90acb25 943 Gene3D G3DSA:3.30.1490.20 201 248 2.2E-30 T 26-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 smi_1925 a37bcbe7684f8131637a376fb90acb25 943 SMART SM00382 633 908 2.1E-5 T 26-04-2016 IPR003593 AAA+ ATPase domain smi_1925 a37bcbe7684f8131637a376fb90acb25 943 SMART SM00382 24 566 17.0 T 26-04-2016 IPR003593 AAA+ ATPase domain smi_1925 a37bcbe7684f8131637a376fb90acb25 943 SUPERFAMILY SSF52540 10 205 1.07E-47 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1925 a37bcbe7684f8131637a376fb90acb25 943 SUPERFAMILY SSF52540 432 571 1.07E-47 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1925 a37bcbe7684f8131637a376fb90acb25 943 SUPERFAMILY SSF52540 618 914 4.05E-53 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1925 a37bcbe7684f8131637a376fb90acb25 943 Hamap MF_00205 UvrABC system protein A [uvrA]. 2 940 22.716 T 26-04-2016 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 smi_1925 a37bcbe7684f8131637a376fb90acb25 943 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 4 925 0.0 T 26-04-2016 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 smi_1925 a37bcbe7684f8131637a376fb90acb25 943 Gene3D G3DSA:1.20.1580.10 92 130 8.7E-49 T 26-04-2016 smi_1925 a37bcbe7684f8131637a376fb90acb25 943 Gene3D G3DSA:1.20.1580.10 406 479 8.7E-49 T 26-04-2016 smi_1925 a37bcbe7684f8131637a376fb90acb25 943 Gene3D G3DSA:1.20.1580.10 249 282 8.7E-49 T 26-04-2016 smi_1925 a37bcbe7684f8131637a376fb90acb25 943 PANTHER PTHR32282 1 943 0.0 T 26-04-2016 smi_1925 a37bcbe7684f8131637a376fb90acb25 943 Gene3D G3DSA:1.20.1580.10 694 820 1.1E-56 T 26-04-2016 smi_1925 a37bcbe7684f8131637a376fb90acb25 943 PANTHER PTHR32282:SF2 1 943 0.0 T 26-04-2016 smi_1925 a37bcbe7684f8131637a376fb90acb25 943 Gene3D G3DSA:1.10.8.280 284 405 3.3E-42 T 26-04-2016 smi_1925 a37bcbe7684f8131637a376fb90acb25 943 ProSitePatterns PS00211 ABC transporters family signature. 830 844 - T 26-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 smi_1925 a37bcbe7684f8131637a376fb90acb25 943 ProSitePatterns PS00211 ABC transporters family signature. 489 503 - T 26-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 smi_0120 471a749103f824fa9f21deff1c5dc12c 68 PANTHER PTHR10245 1 68 1.8E-45 T 26-04-2016 smi_0120 471a749103f824fa9f21deff1c5dc12c 68 Pfam PF01381 Helix-turn-helix 7 58 1.4E-13 T 26-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 smi_0120 471a749103f824fa9f21deff1c5dc12c 68 PANTHER PTHR10245:SF50 1 68 1.8E-45 T 26-04-2016 smi_0120 471a749103f824fa9f21deff1c5dc12c 68 SUPERFAMILY SSF47413 1 67 4.29E-17 T 26-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 smi_0120 471a749103f824fa9f21deff1c5dc12c 68 Gene3D G3DSA:1.10.260.40 3 66 6.8E-22 T 26-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 smi_0120 471a749103f824fa9f21deff1c5dc12c 68 SMART SM00530 6 61 1.6E-12 T 26-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 smi_1816 093224d4b97864ca26edcb04f1a753ce 353 SUPERFAMILY SSF100879 251 351 6.87E-23 T 26-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 smi_1816 093224d4b97864ca26edcb04f1a753ce 353 Pfam PF00817 impB/mucB/samB family 17 167 3.8E-49 T 26-04-2016 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 smi_1816 093224d4b97864ca26edcb04f1a753ce 353 Hamap MF_01113 DNA polymerase IV [dinB]. 11 352 36.617 T 26-04-2016 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 smi_1816 093224d4b97864ca26edcb04f1a753ce 353 Gene3D G3DSA:1.10.150.20 179 248 3.5E-24 T 26-04-2016 smi_1816 093224d4b97864ca26edcb04f1a753ce 353 PANTHER PTHR11076 1 353 3.1E-138 T 26-04-2016 smi_1816 093224d4b97864ca26edcb04f1a753ce 353 Pfam PF11799 impB/mucB/samB family C-terminal domain 249 353 5.0E-17 T 26-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 smi_1816 093224d4b97864ca26edcb04f1a753ce 353 Gene3D G3DSA:3.30.70.270 79 177 7.2E-33 T 26-04-2016 smi_1816 093224d4b97864ca26edcb04f1a753ce 353 Pfam PF11798 IMS family HHH motif 182 210 2.5E-6 T 26-04-2016 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 smi_1816 093224d4b97864ca26edcb04f1a753ce 353 Gene3D G3DSA:3.30.1490.100 254 353 5.1E-27 T 26-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 smi_1816 093224d4b97864ca26edcb04f1a753ce 353 SUPERFAMILY SSF56672 5 247 1.07E-91 T 26-04-2016 smi_1661 7a9db3fe2f9fc2de7f4e55cf767a4a04 694 Pfam PF01501 Glycosyl transferase family 8 303 527 1.1E-37 T 26-04-2016 IPR002495 Glycosyl transferase, family 8 GO:0016757 smi_1661 7a9db3fe2f9fc2de7f4e55cf767a4a04 694 SUPERFAMILY SSF53448 303 547 3.09E-60 T 26-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases smi_1661 7a9db3fe2f9fc2de7f4e55cf767a4a04 694 SUPERFAMILY SSF53448 4 230 4.5E-58 T 26-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases smi_1661 7a9db3fe2f9fc2de7f4e55cf767a4a04 694 Gene3D G3DSA:3.90.550.10 3 206 1.6E-56 T 26-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases smi_1661 7a9db3fe2f9fc2de7f4e55cf767a4a04 694 Gene3D G3DSA:3.90.550.10 302 546 9.7E-60 T 26-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases smi_1661 7a9db3fe2f9fc2de7f4e55cf767a4a04 694 Pfam PF00535 Glycosyl transferase family 2 6 130 6.2E-39 T 26-04-2016 IPR001173 Glycosyltransferase 2-like smi_1661 7a9db3fe2f9fc2de7f4e55cf767a4a04 694 PANTHER PTHR22916 2 483 2.2E-65 T 26-04-2016 smi_1661 7a9db3fe2f9fc2de7f4e55cf767a4a04 694 PANTHER PTHR22916:SF24 2 483 2.2E-65 T 26-04-2016 smi_0759 7d9f712d24b0de8c195210b8036719c8 367 PANTHER PTHR21363:SF0 1 362 8.6E-82 T 26-04-2016 smi_0759 7d9f712d24b0de8c195210b8036719c8 367 Pfam PF02153 Prephenate dehydrogenase 18 276 4.6E-73 T 26-04-2016 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 smi_0759 7d9f712d24b0de8c195210b8036719c8 367 SUPERFAMILY SSF48179 176 285 9.75E-33 T 26-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 smi_0759 7d9f712d24b0de8c195210b8036719c8 367 Gene3D G3DSA:3.40.50.720 2 182 2.2E-36 T 26-04-2016 IPR016040 NAD(P)-binding domain smi_0759 7d9f712d24b0de8c195210b8036719c8 367 SUPERFAMILY SSF51735 5 172 1.32E-43 T 26-04-2016 IPR016040 NAD(P)-binding domain smi_0759 7d9f712d24b0de8c195210b8036719c8 367 PANTHER PTHR21363 1 362 8.6E-82 T 26-04-2016 smi_1155 e0f58c3e5620f29436073c918ca47de3 425 SUPERFAMILY SSF54637 314 423 5.98E-10 T 26-04-2016 IPR029069 HotDog domain smi_1155 e0f58c3e5620f29436073c918ca47de3 425 Gene3D G3DSA:1.10.10.10 12 58 2.6E-9 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain smi_1155 e0f58c3e5620f29436073c918ca47de3 425 Gene3D G3DSA:3.10.580.10 207 305 2.7E-19 T 26-04-2016 smi_1155 e0f58c3e5620f29436073c918ca47de3 425 SMART SM00116 198 246 0.049 T 26-04-2016 IPR000644 CBS domain smi_1155 e0f58c3e5620f29436073c918ca47de3 425 SMART SM00116 257 305 6.4 T 26-04-2016 IPR000644 CBS domain smi_1155 e0f58c3e5620f29436073c918ca47de3 425 Gene3D G3DSA:3.10.129.10 313 424 6.8E-10 T 26-04-2016 IPR029069 HotDog domain smi_1155 e0f58c3e5620f29436073c918ca47de3 425 Pfam PF00571 CBS domain 196 240 7.4E-5 T 26-04-2016 IPR000644 CBS domain smi_1155 e0f58c3e5620f29436073c918ca47de3 425 Pfam PF00571 CBS domain 252 304 4.0E-5 T 26-04-2016 IPR000644 CBS domain smi_1155 e0f58c3e5620f29436073c918ca47de3 425 SUPERFAMILY SSF54631 187 306 1.52E-24 T 26-04-2016 smi_1155 e0f58c3e5620f29436073c918ca47de3 425 SUPERFAMILY SSF46785 12 58 4.73E-7 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain smi_1155 e0f58c3e5620f29436073c918ca47de3 425 Pfam PF03061 Thioesterase superfamily 342 413 6.9E-5 T 26-04-2016 IPR006683 Thioesterase domain smi_1155 e0f58c3e5620f29436073c918ca47de3 425 PANTHER PTHR11911 201 307 3.9E-19 T 26-04-2016 smi_1155 e0f58c3e5620f29436073c918ca47de3 425 Pfam PF07085 DRTGG domain 74 175 3.8E-31 T 26-04-2016 IPR010766 DRTGG KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 smi_1155 e0f58c3e5620f29436073c918ca47de3 425 Gene3D G3DSA:3.40.1390.20 66 206 2.5E-46 T 26-04-2016 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like smi_1155 e0f58c3e5620f29436073c918ca47de3 425 Pfam PF00392 Bacterial regulatory proteins, gntR family 13 57 2.8E-5 T 26-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 smi_1155 e0f58c3e5620f29436073c918ca47de3 425 SUPERFAMILY SSF75138 70 182 4.97E-30 T 26-04-2016 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like smi_0881 d3e90d73911ce9af00e469ce4218082d 172 SUPERFAMILY SSF52540 1 162 4.09E-18 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0881 d3e90d73911ce9af00e469ce4218082d 172 PANTHER PTHR37816 1 168 1.0E-45 T 26-04-2016 smi_0881 d3e90d73911ce9af00e469ce4218082d 172 Gene3D G3DSA:3.40.50.300 1 110 4.2E-13 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0881 d3e90d73911ce9af00e469ce4218082d 172 PANTHER PTHR37816:SF1 1 168 1.0E-45 T 26-04-2016 smi_0895 fdf2cccb4fa800c179c8f52b7dbc213e 318 Pfam PF02653 Branched-chain amino acid transport system / permease component 12 297 1.1E-38 T 26-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 smi_0895 fdf2cccb4fa800c179c8f52b7dbc213e 318 PANTHER PTHR32196 8 318 1.2E-116 T 26-04-2016 smi_0895 fdf2cccb4fa800c179c8f52b7dbc213e 318 PANTHER PTHR32196:SF40 8 318 1.2E-116 T 26-04-2016 smi_1154 75fbbb8f6fc738e637515376eb0c1570 286 Pfam PF00557 Metallopeptidase family M24 129 271 5.3E-29 T 26-04-2016 IPR000994 Peptidase M24, structural domain smi_1154 75fbbb8f6fc738e637515376eb0c1570 286 Pfam PF00557 Metallopeptidase family M24 11 100 2.9E-8 T 26-04-2016 IPR000994 Peptidase M24, structural domain smi_1154 75fbbb8f6fc738e637515376eb0c1570 286 PANTHER PTHR10804:SF108 1 101 1.3E-176 T 26-04-2016 smi_1154 75fbbb8f6fc738e637515376eb0c1570 286 PANTHER PTHR10804:SF108 128 284 1.3E-176 T 26-04-2016 smi_1154 75fbbb8f6fc738e637515376eb0c1570 286 Gene3D G3DSA:3.90.230.10 1 280 1.3E-76 T 26-04-2016 IPR000994 Peptidase M24, structural domain smi_1154 75fbbb8f6fc738e637515376eb0c1570 286 PANTHER PTHR10804 1 101 1.3E-176 T 26-04-2016 smi_1154 75fbbb8f6fc738e637515376eb0c1570 286 PANTHER PTHR10804 128 284 1.3E-176 T 26-04-2016 smi_1154 75fbbb8f6fc738e637515376eb0c1570 286 SUPERFAMILY SSF55920 1 101 4.23E-65 T 26-04-2016 IPR000994 Peptidase M24, structural domain smi_1154 75fbbb8f6fc738e637515376eb0c1570 286 SUPERFAMILY SSF55920 129 279 4.23E-65 T 26-04-2016 IPR000994 Peptidase M24, structural domain smi_1154 75fbbb8f6fc738e637515376eb0c1570 286 Hamap MF_01974 Methionine aminopeptidase [map]. 2 280 35.264 T 26-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 smi_1293 475c67e8d4f85ad00bf0e7eba352fff1 280 Pfam PF04018 Domain of unknown function (DUF368) 19 236 3.1E-34 T 26-04-2016 IPR007163 Protein of unknown function DUF368 smi_1293 475c67e8d4f85ad00bf0e7eba352fff1 280 PANTHER PTHR37308 1 278 1.2E-89 T 26-04-2016 smi_0054 81914ee72c33a8e1bf0923dcef18a64e 77 Gene3D G3DSA:1.10.1200.10 1 77 7.4E-20 T 26-04-2016 IPR009081 Phosphopantetheine binding ACP domain smi_0054 81914ee72c33a8e1bf0923dcef18a64e 77 Hamap MF_01217 Acyl carrier protein [acpP]. 5 77 14.088 T 26-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 smi_0054 81914ee72c33a8e1bf0923dcef18a64e 77 SUPERFAMILY SSF47336 1 77 1.57E-14 T 26-04-2016 IPR009081 Phosphopantetheine binding ACP domain smi_0054 81914ee72c33a8e1bf0923dcef18a64e 77 Pfam PF00550 Phosphopantetheine attachment site 10 72 6.6E-9 T 26-04-2016 IPR009081 Phosphopantetheine binding ACP domain smi_1781 9378574286319f87e6768d7e93d362b3 47 SUPERFAMILY SSF56349 6 46 3.83E-5 T 26-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 smi_1781 9378574286319f87e6768d7e93d362b3 47 Gene3D G3DSA:1.10.443.10 6 46 7.7E-6 T 26-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 smi_1062 0d223d1273b1865af1af254f98c2449f 259 SUPERFAMILY SSF53098 60 254 2.28E-67 T 26-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 smi_1062 0d223d1273b1865af1af254f98c2449f 259 PANTHER PTHR10954 2 259 1.1E-129 T 26-04-2016 IPR001352 Ribonuclease HII/HIII GO:0003723|GO:0004523 smi_1062 0d223d1273b1865af1af254f98c2449f 259 Pfam PF01351 Ribonuclease HII 73 248 2.6E-37 T 26-04-2016 IPR024567 Ribonuclease HII/HIII domain smi_1062 0d223d1273b1865af1af254f98c2449f 259 Hamap MF_00052_B Ribonuclease HII [rnhB]. 71 249 35.122 T 26-04-2016 IPR022898 Ribonuclease HII GO:0004523 smi_1062 0d223d1273b1865af1af254f98c2449f 259 PANTHER PTHR10954:SF7 2 259 1.1E-129 T 26-04-2016 smi_1062 0d223d1273b1865af1af254f98c2449f 259 Gene3D G3DSA:3.30.420.10 71 211 2.1E-47 T 26-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 smi_1990 d51076a3d0111353dbf4c535310938a1 343 Pfam PF00581 Rhodanese-like domain 136 230 8.6E-12 T 26-04-2016 IPR001763 Rhodanese-like domain smi_1990 d51076a3d0111353dbf4c535310938a1 343 PANTHER PTHR22778 10 322 9.4E-111 T 26-04-2016 smi_1990 d51076a3d0111353dbf4c535310938a1 343 SUPERFAMILY SSF52821 125 268 1.7E-34 T 26-04-2016 IPR001763 Rhodanese-like domain smi_1990 d51076a3d0111353dbf4c535310938a1 343 SMART SM00450 135 236 8.3E-20 T 26-04-2016 IPR001763 Rhodanese-like domain smi_1990 d51076a3d0111353dbf4c535310938a1 343 PANTHER PTHR22778:SF21 10 322 9.4E-111 T 26-04-2016 smi_1990 d51076a3d0111353dbf4c535310938a1 343 Gene3D G3DSA:3.40.250.10 121 248 4.2E-34 T 26-04-2016 IPR001763 Rhodanese-like domain smi_1990 d51076a3d0111353dbf4c535310938a1 343 Pfam PF12368 Rhodanase C-terminal 242 308 2.4E-13 T 26-04-2016 IPR022111 Rhodanase, C-terminal smi_1990 d51076a3d0111353dbf4c535310938a1 343 Hamap MF_00469 UPF0176 protein YceA [yceA]. 18 287 39.388 T 26-04-2016 IPR020936 Uncharacterised protein family UPF0176 smi_0715 552b1c1d702450e8e4f8406bc667823e 58 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 22.32 T 26-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 smi_0715 552b1c1d702450e8e4f8406bc667823e 58 Pfam PF01165 Ribosomal protein S21 5 56 3.3E-21 T 26-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 smi_0715 552b1c1d702450e8e4f8406bc667823e 58 ProSitePatterns PS01181 Ribosomal protein S21 signature. 13 25 - T 26-04-2016 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_0715 552b1c1d702450e8e4f8406bc667823e 58 PANTHER PTHR21109 1 56 2.6E-22 T 26-04-2016 smi_0715 552b1c1d702450e8e4f8406bc667823e 58 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 16 43 6.0E-9 T 26-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 smi_0715 552b1c1d702450e8e4f8406bc667823e 58 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 1.08E-15 T 26-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 smi_0715 552b1c1d702450e8e4f8406bc667823e 58 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 1.08E-15 T 26-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 smi_0715 552b1c1d702450e8e4f8406bc667823e 58 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 1.08E-15 T 26-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 smi_0715 552b1c1d702450e8e4f8406bc667823e 58 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 1.08E-15 T 26-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 smi_0715 552b1c1d702450e8e4f8406bc667823e 58 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 3 56 7.7E-22 T 26-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 smi_0843 c28c313687d5140dd928ca8d7a75fa2c 308 PRINTS PR00069 Aldo-keto reductase signature 188 217 4.7E-9 T 26-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 smi_0843 c28c313687d5140dd928ca8d7a75fa2c 308 PRINTS PR00069 Aldo-keto reductase signature 104 122 4.7E-9 T 26-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 smi_0843 c28c313687d5140dd928ca8d7a75fa2c 308 PRINTS PR00069 Aldo-keto reductase signature 236 260 4.7E-9 T 26-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 smi_0843 c28c313687d5140dd928ca8d7a75fa2c 308 PANTHER PTHR11732:SF10 201 302 9.0E-149 T 26-04-2016 smi_0843 c28c313687d5140dd928ca8d7a75fa2c 308 PANTHER PTHR11732:SF10 1 184 9.0E-149 T 26-04-2016 smi_0843 c28c313687d5140dd928ca8d7a75fa2c 308 Gene3D G3DSA:3.20.20.100 1 303 3.4E-70 T 26-04-2016 IPR023210 NADP-dependent oxidoreductase domain smi_0843 c28c313687d5140dd928ca8d7a75fa2c 308 Pfam PF00248 Aldo/keto reductase family 15 299 8.3E-58 T 26-04-2016 IPR023210 NADP-dependent oxidoreductase domain smi_0843 c28c313687d5140dd928ca8d7a75fa2c 308 PANTHER PTHR11732 201 302 9.0E-149 T 26-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta smi_0843 c28c313687d5140dd928ca8d7a75fa2c 308 PANTHER PTHR11732 1 184 9.0E-149 T 26-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta smi_0843 c28c313687d5140dd928ca8d7a75fa2c 308 SUPERFAMILY SSF51430 1 300 3.01E-70 T 26-04-2016 IPR023210 NADP-dependent oxidoreductase domain smi_0523 2d22432629f535f6fced62538b294b9d 284 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 17 263 2.0E-78 T 26-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 smi_0523 2d22432629f535f6fced62538b294b9d 284 Gene3D G3DSA:3.40.50.150 173 283 1.5E-60 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase smi_0523 2d22432629f535f6fced62538b294b9d 284 Gene3D G3DSA:3.40.50.150 4 67 1.5E-60 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase smi_0523 2d22432629f535f6fced62538b294b9d 284 PANTHER PTHR30481 1 283 2.2E-85 T 26-04-2016 smi_0523 2d22432629f535f6fced62538b294b9d 284 PIRSF PIRSF000398 9 284 3.1E-87 T 26-04-2016 IPR012263 Adenine modification methylase, M.EcoRV-type GO:0009007|GO:0032775 smi_0523 2d22432629f535f6fced62538b294b9d 284 SUPERFAMILY SSF53335 11 283 9.37E-86 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase smi_0523 2d22432629f535f6fced62538b294b9d 284 TIGRFAM TIGR00571 dam: DNA adenine methylase 12 281 6.2E-88 T 26-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 smi_0523 2d22432629f535f6fced62538b294b9d 284 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 191 197 - T 26-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 smi_0523 2d22432629f535f6fced62538b294b9d 284 Gene3D G3DSA:1.10.1020.10 68 166 1.5E-33 T 26-04-2016 IPR023095 Adenine-specific methyltransferase, domain 2 GO:0009007 smi_0523 2d22432629f535f6fced62538b294b9d 284 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 17 33 5.0E-19 T 26-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 smi_0523 2d22432629f535f6fced62538b294b9d 284 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 39 53 5.0E-19 T 26-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 smi_0523 2d22432629f535f6fced62538b294b9d 284 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 58 71 5.0E-19 T 26-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 smi_0523 2d22432629f535f6fced62538b294b9d 284 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 188 200 5.0E-19 T 26-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 smi_0523 2d22432629f535f6fced62538b294b9d 284 PANTHER PTHR30481:SF3 1 283 2.2E-85 T 26-04-2016 smi_2073 1f5138c1afeacfa9bd44f269f8426af7 122 TIGRFAM TIGR02988 YaaA_near_RecF: S4 domain protein YaaA 2 61 6.9E-26 T 26-04-2016 IPR014330 RNA-binding S4-related,YaaA smi_2073 1f5138c1afeacfa9bd44f269f8426af7 122 PANTHER PTHR32319 4 99 2.0E-51 T 26-04-2016 smi_2073 1f5138c1afeacfa9bd44f269f8426af7 122 Gene3D G3DSA:3.10.290.10 1 66 1.5E-19 T 26-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 smi_2073 1f5138c1afeacfa9bd44f269f8426af7 122 Pfam PF13275 S4 domain 4 66 2.6E-21 T 26-04-2016 smi_2073 1f5138c1afeacfa9bd44f269f8426af7 122 PANTHER PTHR32319:SF3 4 99 2.0E-51 T 26-04-2016 smi_2073 1f5138c1afeacfa9bd44f269f8426af7 122 SUPERFAMILY SSF55174 2 65 3.68E-15 T 26-04-2016 smi_1407 629d03694901ce27564f92eb0e52f611 230 SMART SM00382 29 225 2.8E-13 T 26-04-2016 IPR003593 AAA+ ATPase domain smi_1407 629d03694901ce27564f92eb0e52f611 230 TIGRFAM TIGR02673 FtsE: cell division ATP-binding protein FtsE 3 216 3.3E-87 T 26-04-2016 IPR005286 Cell division protein FtsE, ATP-binding GO:0005524|GO:0051301 smi_1407 629d03694901ce27564f92eb0e52f611 230 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 26-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 smi_1407 629d03694901ce27564f92eb0e52f611 230 Pfam PF00005 ABC transporter 20 167 1.1E-34 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 smi_1407 629d03694901ce27564f92eb0e52f611 230 PANTHER PTHR24220:SF470 5 230 3.1E-127 T 26-04-2016 smi_1407 629d03694901ce27564f92eb0e52f611 230 SUPERFAMILY SSF52540 3 225 6.72E-71 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1407 629d03694901ce27564f92eb0e52f611 230 PANTHER PTHR24220 5 230 3.1E-127 T 26-04-2016 smi_1407 629d03694901ce27564f92eb0e52f611 230 Gene3D G3DSA:3.40.50.300 2 223 3.9E-71 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1564 689ba87b2f074fc456af31303a0d32d6 252 SUPERFAMILY SSF51351 3 250 6.81E-90 T 26-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 smi_1564 689ba87b2f074fc456af31303a0d32d6 252 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 3 251 39.271 T 26-04-2016 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 smi_1564 689ba87b2f074fc456af31303a0d32d6 252 Pfam PF00121 Triosephosphate isomerase 6 247 3.7E-91 T 26-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 smi_1564 689ba87b2f074fc456af31303a0d32d6 252 ProSitePatterns PS00171 Triosephosphate isomerase active site. 166 176 - T 26-04-2016 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 smi_1564 689ba87b2f074fc456af31303a0d32d6 252 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 6 242 9.7E-60 T 26-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 smi_1564 689ba87b2f074fc456af31303a0d32d6 252 Gene3D G3DSA:3.20.20.70 3 250 3.9E-102 T 26-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 smi_1564 689ba87b2f074fc456af31303a0d32d6 252 PANTHER PTHR21139 1 251 2.2E-119 T 26-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 smi_1382 b944ce9ba1be9821206352501a7690db 266 SUPERFAMILY SSF161098 35 241 2.62E-34 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 smi_1382 b944ce9ba1be9821206352501a7690db 266 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 35 144 3.9E-14 T 26-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 smi_1382 b944ce9ba1be9821206352501a7690db 266 PANTHER PTHR30614 34 255 9.7E-67 T 26-04-2016 smi_1382 b944ce9ba1be9821206352501a7690db 266 Gene3D G3DSA:1.10.3720.10 35 249 1.4E-35 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 smi_1382 b944ce9ba1be9821206352501a7690db 266 PANTHER PTHR30614:SF16 34 255 9.7E-67 T 26-04-2016 smi_1382 b944ce9ba1be9821206352501a7690db 266 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 55 250 3.2E-17 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 smi_1791 cd58757964ae8ca72839503d9ffd0c2e 242 SUPERFAMILY SSF56300 2 194 2.73E-30 T 26-04-2016 IPR029052 Metallo-dependent phosphatase-like smi_1791 cd58757964ae8ca72839503d9ffd0c2e 242 Pfam PF00149 Calcineurin-like phosphoesterase 3 205 5.1E-13 T 26-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 smi_1791 cd58757964ae8ca72839503d9ffd0c2e 242 PANTHER PTHR24032 1 84 1.7E-14 T 26-04-2016 smi_1791 cd58757964ae8ca72839503d9ffd0c2e 242 PANTHER PTHR24032 113 174 1.7E-14 T 26-04-2016 smi_1791 cd58757964ae8ca72839503d9ffd0c2e 242 Gene3D G3DSA:3.60.21.10 111 163 2.4E-24 T 26-04-2016 IPR029052 Metallo-dependent phosphatase-like smi_1791 cd58757964ae8ca72839503d9ffd0c2e 242 Gene3D G3DSA:3.60.21.10 3 79 2.4E-24 T 26-04-2016 IPR029052 Metallo-dependent phosphatase-like smi_1791 cd58757964ae8ca72839503d9ffd0c2e 242 PANTHER PTHR24032:SF31 1 84 1.7E-14 T 26-04-2016 smi_1791 cd58757964ae8ca72839503d9ffd0c2e 242 PANTHER PTHR24032:SF31 113 174 1.7E-14 T 26-04-2016 smi_0952 61a06b42840d45720fbf3bc492a60fa6 71 Pfam PF06855 YozE SAM-like fold 4 70 5.7E-22 T 26-04-2016 IPR023089 YozE SAM-like domain smi_0952 61a06b42840d45720fbf3bc492a60fa6 71 SUPERFAMILY SSF140652 2 71 3.27E-26 T 26-04-2016 IPR023089 YozE SAM-like domain smi_0952 61a06b42840d45720fbf3bc492a60fa6 71 PANTHER PTHR41284 2 71 4.8E-29 T 26-04-2016 smi_0952 61a06b42840d45720fbf3bc492a60fa6 71 PIRSF PIRSF037262 1 71 7.7E-28 T 26-04-2016 IPR010673 Protein of unknown function UPF0346 smi_0952 61a06b42840d45720fbf3bc492a60fa6 71 Hamap MF_01538 UPF0346 protein . 1 71 22.941 T 26-04-2016 IPR010673 Protein of unknown function UPF0346 smi_0952 61a06b42840d45720fbf3bc492a60fa6 71 PANTHER PTHR41284:SF1 2 71 4.8E-29 T 26-04-2016 smi_0952 61a06b42840d45720fbf3bc492a60fa6 71 Gene3D G3DSA:1.10.150.260 2 71 2.2E-27 T 26-04-2016 IPR023089 YozE SAM-like domain smi_1765 2fca5e28f83d4ba0448d393d497e3507 701 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 556 570 6.6E-28 T 26-04-2016 IPR001270 ClpA/B family GO:0005524 smi_1765 2fca5e28f83d4ba0448d393d497e3507 701 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 523 541 6.6E-28 T 26-04-2016 IPR001270 ClpA/B family GO:0005524 smi_1765 2fca5e28f83d4ba0448d393d497e3507 701 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 493 511 6.6E-28 T 26-04-2016 IPR001270 ClpA/B family GO:0005524 smi_1765 2fca5e28f83d4ba0448d393d497e3507 701 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 448 466 6.6E-28 T 26-04-2016 IPR001270 ClpA/B family GO:0005524 smi_1765 2fca5e28f83d4ba0448d393d497e3507 701 PANTHER PTHR11638 76 699 0.0 T 26-04-2016 smi_1765 2fca5e28f83d4ba0448d393d497e3507 701 Gene3D G3DSA:3.40.50.300 77 259 1.0E-43 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1765 2fca5e28f83d4ba0448d393d497e3507 701 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 478 496 - T 26-04-2016 IPR028299 ClpA/B, conserved site 2 smi_1765 2fca5e28f83d4ba0448d393d497e3507 701 PANTHER PTHR11638:SF101 76 699 0.0 T 26-04-2016 smi_1765 2fca5e28f83d4ba0448d393d497e3507 701 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 610 680 5.6E-20 T 26-04-2016 IPR019489 Clp ATPase, C-terminal smi_1765 2fca5e28f83d4ba0448d393d497e3507 701 SMART SM01086 610 697 1.1E-24 T 26-04-2016 IPR019489 Clp ATPase, C-terminal smi_1765 2fca5e28f83d4ba0448d393d497e3507 701 Gene3D G3DSA:1.10.8.60 261 343 4.4E-24 T 26-04-2016 smi_1765 2fca5e28f83d4ba0448d393d497e3507 701 Pfam PF07724 AAA domain (Cdc48 subfamily) 443 603 1.1E-42 T 26-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 smi_1765 2fca5e28f83d4ba0448d393d497e3507 701 Gene3D G3DSA:3.40.50.300 401 621 1.0E-54 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1765 2fca5e28f83d4ba0448d393d497e3507 701 SUPERFAMILY SSF52540 393 676 1.26E-71 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1765 2fca5e28f83d4ba0448d393d497e3507 701 SMART SM00382 444 596 1.5E-10 T 26-04-2016 IPR003593 AAA+ ATPase domain smi_1765 2fca5e28f83d4ba0448d393d497e3507 701 SMART SM00382 113 260 3.4E-10 T 26-04-2016 IPR003593 AAA+ ATPase domain smi_1765 2fca5e28f83d4ba0448d393d497e3507 701 Gene3D G3DSA:1.10.8.60 622 698 7.9E-25 T 26-04-2016 smi_1765 2fca5e28f83d4ba0448d393d497e3507 701 SUPERFAMILY SSF52540 76 356 4.83E-63 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1765 2fca5e28f83d4ba0448d393d497e3507 701 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 118 250 2.8E-14 T 26-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 smi_1287 e11e7eefd22131af9e150f06fa6b1d36 163 Pfam PF04394 Protein of unknown function, DUF536 104 146 2.8E-17 T 26-04-2016 IPR007489 Domain of unknown function DUF536 smi_1287 e11e7eefd22131af9e150f06fa6b1d36 163 Pfam PF13412 Winged helix-turn-helix DNA-binding 5 28 6.1E-5 T 26-04-2016 smi_1287 e11e7eefd22131af9e150f06fa6b1d36 163 Gene3D G3DSA:1.10.10.10 5 31 9.1E-6 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain smi_1875 0a2615505bdbad383bc1c222853a287a 498 SUPERFAMILY SSF69360 356 498 6.15E-24 T 26-04-2016 smi_1875 0a2615505bdbad383bc1c222853a287a 498 PANTHER PTHR33308:SF3 363 495 4.1E-27 T 26-04-2016 smi_1875 0a2615505bdbad383bc1c222853a287a 498 Pfam PF01473 Putative cell wall binding repeat 462 480 2.2E-5 T 26-04-2016 IPR018337 Cell wall/choline-binding repeat smi_1875 0a2615505bdbad383bc1c222853a287a 498 Pfam PF01473 Putative cell wall binding repeat 440 459 0.0061 T 26-04-2016 IPR018337 Cell wall/choline-binding repeat smi_1875 0a2615505bdbad383bc1c222853a287a 498 Pfam PF01473 Putative cell wall binding repeat 362 372 0.22 T 26-04-2016 IPR018337 Cell wall/choline-binding repeat smi_1875 0a2615505bdbad383bc1c222853a287a 498 PANTHER PTHR33308 363 495 4.1E-27 T 26-04-2016 smi_1875 0a2615505bdbad383bc1c222853a287a 498 Gene3D G3DSA:2.10.270.10 363 415 6.7E-7 T 26-04-2016 smi_1875 0a2615505bdbad383bc1c222853a287a 498 Gene3D G3DSA:2.10.270.10 416 480 7.0E-13 T 26-04-2016 smi_0081 e485e0055679b14d16a3a375bb7c51b2 301 Pfam PF03609 PTS system sorbose-specific iic component 4 236 9.9E-62 T 26-04-2016 IPR004700 Phosphotransferase system, sorbose-specific IIC subunit GO:0009401|GO:0016021 smi_0081 e485e0055679b14d16a3a375bb7c51b2 301 PANTHER PTHR32502 2 223 3.5E-43 T 26-04-2016 smi_0081 e485e0055679b14d16a3a375bb7c51b2 301 PANTHER PTHR32502:SF8 2 223 3.5E-43 T 26-04-2016 smi_1584 b64e0eb7fbebfb813f50d17344a12f82 406 SUPERFAMILY SSF55729 5 163 4.18E-44 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase smi_1584 b64e0eb7fbebfb813f50d17344a12f82 406 SUPERFAMILY SSF55729 297 391 5.09E-26 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase smi_1584 b64e0eb7fbebfb813f50d17344a12f82 406 SUPERFAMILY SSF55729 168 240 5.09E-26 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase smi_1584 b64e0eb7fbebfb813f50d17344a12f82 406 Gene3D G3DSA:3.40.630.30 297 371 1.1E-38 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase smi_1584 b64e0eb7fbebfb813f50d17344a12f82 406 Gene3D G3DSA:3.40.630.30 172 239 1.1E-38 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase smi_1584 b64e0eb7fbebfb813f50d17344a12f82 406 Pfam PF02388 FemAB family 10 393 8.3E-124 T 26-04-2016 IPR003447 FemABX peptidyl transferase GO:0009252|GO:0016755 smi_1584 b64e0eb7fbebfb813f50d17344a12f82 406 PANTHER PTHR36174 1 406 7.3E-170 T 26-04-2016 smi_1584 b64e0eb7fbebfb813f50d17344a12f82 406 PANTHER PTHR36174:SF1 1 406 7.3E-170 T 26-04-2016 smi_1584 b64e0eb7fbebfb813f50d17344a12f82 406 Gene3D G3DSA:3.40.630.30 1 171 4.1E-60 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase smi_0228 8fa154897f496ee422b7fa034969580f 99 SMART SM01323 3 85 5.6E-28 T 26-04-2016 IPR003849 Preprotein translocase YajC smi_0228 8fa154897f496ee422b7fa034969580f 99 Pfam PF02699 Preprotein translocase subunit 8 82 1.4E-20 T 26-04-2016 IPR003849 Preprotein translocase YajC smi_0228 8fa154897f496ee422b7fa034969580f 99 PANTHER PTHR33909:SF1 1 99 6.5E-28 T 26-04-2016 smi_0228 8fa154897f496ee422b7fa034969580f 99 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 6 85 2.0E-17 T 26-04-2016 IPR003849 Preprotein translocase YajC smi_0228 8fa154897f496ee422b7fa034969580f 99 PANTHER PTHR33909 1 99 6.5E-28 T 26-04-2016 smi_0293 72e8d71ae9b970d81c6e466a5bb81b9e 256 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 2 253 1.5E-81 T 26-04-2016 IPR015991 Uncharacterised deoxyribonuclease TatD-type GO:0004536 smi_0293 72e8d71ae9b970d81c6e466a5bb81b9e 256 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 189 205 - T 26-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 smi_0293 72e8d71ae9b970d81c6e466a5bb81b9e 256 Gene3D G3DSA:3.20.20.140 1 254 5.7E-93 T 26-04-2016 smi_0293 72e8d71ae9b970d81c6e466a5bb81b9e 256 PANTHER PTHR10060:SF20 1 256 6.2E-126 T 26-04-2016 smi_0293 72e8d71ae9b970d81c6e466a5bb81b9e 256 SUPERFAMILY SSF51556 1 254 2.46E-88 T 26-04-2016 IPR032466 Metal-dependent hydrolase smi_0293 72e8d71ae9b970d81c6e466a5bb81b9e 256 PIRSF PIRSF005902 1 256 1.0E-77 T 26-04-2016 IPR001130 TatD family GO:0016788 smi_0293 72e8d71ae9b970d81c6e466a5bb81b9e 256 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 2 10 - T 26-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 smi_0293 72e8d71ae9b970d81c6e466a5bb81b9e 256 Pfam PF01026 TatD related DNase 3 252 5.6E-79 T 26-04-2016 IPR001130 TatD family GO:0016788 smi_0293 72e8d71ae9b970d81c6e466a5bb81b9e 256 PANTHER PTHR10060 1 256 6.2E-126 T 26-04-2016 IPR001130 TatD family GO:0016788 smi_0826 e32f43dfe45e216ce16f5e38411d2f6e 79 Pfam PF13083 KH domain 6 75 6.7E-18 T 26-04-2016 smi_0826 e32f43dfe45e216ce16f5e38411d2f6e 79 Gene3D G3DSA:3.30.300.120 6 77 3.9E-11 T 26-04-2016 smi_0826 e32f43dfe45e216ce16f5e38411d2f6e 79 Hamap MF_00088 UPF0109 protein . 4 77 15.654 T 26-04-2016 IPR020627 Uncharacterised protein family UPF0109 smi_0826 e32f43dfe45e216ce16f5e38411d2f6e 79 PANTHER PTHR34654 2 78 1.8E-23 T 26-04-2016 smi_1926 9940a1ea5576339969957fbf214a8e33 314 Gene3D G3DSA:1.20.58.340 235 314 1.9E-19 T 26-04-2016 smi_1926 9940a1ea5576339969957fbf214a8e33 314 Pfam PF01544 CorA-like Mg2+ transporter protein 22 308 2.4E-60 T 26-04-2016 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 smi_1926 9940a1ea5576339969957fbf214a8e33 314 PANTHER PTHR21535:SF40 12 314 1.2E-106 T 26-04-2016 smi_1926 9940a1ea5576339969957fbf214a8e33 314 Gene3D G3DSA:3.30.460.20 7 119 1.0E-4 T 26-04-2016 smi_1926 9940a1ea5576339969957fbf214a8e33 314 PANTHER PTHR21535 12 314 1.2E-106 T 26-04-2016 smi_1926 9940a1ea5576339969957fbf214a8e33 314 Gene3D G3DSA:1.20.58.340 140 232 9.0E-5 T 26-04-2016 smi_1926 9940a1ea5576339969957fbf214a8e33 314 SUPERFAMILY SSF144083 247 311 7.06E-13 T 26-04-2016 smi_1926 9940a1ea5576339969957fbf214a8e33 314 SUPERFAMILY SSF143865 18 246 4.18E-48 T 26-04-2016 smi_2051 6baa6c67db74eb33a3de5ae16fa4bec6 372 SUPERFAMILY SSF54001 34 175 7.16E-21 T 26-04-2016 smi_2051 6baa6c67db74eb33a3de5ae16fa4bec6 372 Pfam PF01473 Putative cell wall binding repeat 336 353 4.0E-4 T 26-04-2016 IPR018337 Cell wall/choline-binding repeat smi_2051 6baa6c67db74eb33a3de5ae16fa4bec6 372 Pfam PF01473 Putative cell wall binding repeat 316 334 6.9E-8 T 26-04-2016 IPR018337 Cell wall/choline-binding repeat smi_2051 6baa6c67db74eb33a3de5ae16fa4bec6 372 Pfam PF01473 Putative cell wall binding repeat 296 314 3.8E-7 T 26-04-2016 IPR018337 Cell wall/choline-binding repeat smi_2051 6baa6c67db74eb33a3de5ae16fa4bec6 372 Pfam PF01473 Putative cell wall binding repeat 277 293 4.2E-6 T 26-04-2016 IPR018337 Cell wall/choline-binding repeat smi_2051 6baa6c67db74eb33a3de5ae16fa4bec6 372 Pfam PF08460 Bacterial SH3 domain 186 249 7.9E-25 T 26-04-2016 IPR003646 SH3-like domain, bacterial-type smi_2051 6baa6c67db74eb33a3de5ae16fa4bec6 372 SUPERFAMILY SSF69360 189 371 8.83E-38 T 26-04-2016 smi_2051 6baa6c67db74eb33a3de5ae16fa4bec6 372 Gene3D G3DSA:2.20.120.10 324 362 6.3E-13 T 26-04-2016 smi_2051 6baa6c67db74eb33a3de5ae16fa4bec6 372 Gene3D G3DSA:2.20.120.10 277 323 2.7E-22 T 26-04-2016 smi_2051 6baa6c67db74eb33a3de5ae16fa4bec6 372 Pfam PF05257 CHAP domain 68 149 9.9E-13 T 26-04-2016 IPR007921 CHAP domain smi_1173 3aa1ff292cdf973e10c252bf379dffd2 572 PANTHER PTHR22573 20 572 1.8E-241 T 26-04-2016 smi_1173 3aa1ff292cdf973e10c252bf379dffd2 572 SUPERFAMILY SSF55957 444 481 1.11E-16 T 26-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 smi_1173 3aa1ff292cdf973e10c252bf379dffd2 572 SUPERFAMILY SSF55957 512 571 1.11E-16 T 26-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 smi_1173 3aa1ff292cdf973e10c252bf379dffd2 572 Gene3D G3DSA:3.40.120.10 307 454 4.4E-37 T 26-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 smi_1173 3aa1ff292cdf973e10c252bf379dffd2 572 PANTHER PTHR22573:SF54 20 572 1.8E-241 T 26-04-2016 smi_1173 3aa1ff292cdf973e10c252bf379dffd2 572 SUPERFAMILY SSF53738 227 311 1.1E-18 T 26-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 smi_1173 3aa1ff292cdf973e10c252bf379dffd2 572 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 226 311 1.5E-22 T 26-04-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 smi_1173 3aa1ff292cdf973e10c252bf379dffd2 572 Gene3D G3DSA:3.40.120.10 19 215 2.3E-60 T 26-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 smi_1173 3aa1ff292cdf973e10c252bf379dffd2 572 SUPERFAMILY SSF53738 26 236 2.71E-45 T 26-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 smi_1173 3aa1ff292cdf973e10c252bf379dffd2 572 SUPERFAMILY SSF53738 304 454 7.06E-30 T 26-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 smi_1173 3aa1ff292cdf973e10c252bf379dffd2 572 Gene3D G3DSA:3.40.120.10 230 306 8.1E-22 T 26-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 smi_1173 3aa1ff292cdf973e10c252bf379dffd2 572 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 138 147 - T 26-04-2016 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 smi_1173 3aa1ff292cdf973e10c252bf379dffd2 572 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 296 311 7.2E-5 T 26-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 smi_1173 3aa1ff292cdf973e10c252bf379dffd2 572 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 137 151 7.2E-5 T 26-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 smi_1173 3aa1ff292cdf973e10c252bf379dffd2 572 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 325 451 6.9E-22 T 26-04-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 smi_1173 3aa1ff292cdf973e10c252bf379dffd2 572 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 494 547 1.2E-11 T 26-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 smi_1173 3aa1ff292cdf973e10c252bf379dffd2 572 Gene3D G3DSA:3.30.310.50 480 571 9.2E-27 T 26-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 smi_1173 3aa1ff292cdf973e10c252bf379dffd2 572 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 41 179 3.4E-41 T 26-04-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 smi_1828 8a47cfad0e39aab8fe421449b2024d5c 62 Pfam PF00830 Ribosomal L28 family 3 58 7.7E-21 T 26-04-2016 IPR026569 Ribosomal protein L28/L24 GO:0003735 smi_1828 8a47cfad0e39aab8fe421449b2024d5c 62 PANTHER PTHR39080:SF1 2 62 4.4E-22 T 26-04-2016 smi_1828 8a47cfad0e39aab8fe421449b2024d5c 62 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 62 17.935 T 26-04-2016 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_1828 8a47cfad0e39aab8fe421449b2024d5c 62 PANTHER PTHR39080 2 62 4.4E-22 T 26-04-2016 smi_1828 8a47cfad0e39aab8fe421449b2024d5c 62 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 56 4.3E-21 T 26-04-2016 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_1828 8a47cfad0e39aab8fe421449b2024d5c 62 SUPERFAMILY SSF143800 1 60 1.28E-23 T 26-04-2016 smi_1828 8a47cfad0e39aab8fe421449b2024d5c 62 Gene3D G3DSA:4.10.1160.10 19 61 4.0E-21 T 26-04-2016 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_1314 2bd3ff462e9f527bb435f8eff9eadb5e 237 PRINTS PR00123 ATP synthase A subunit signature 79 95 1.6E-19 T 26-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 smi_1314 2bd3ff462e9f527bb435f8eff9eadb5e 237 PRINTS PR00123 ATP synthase A subunit signature 147 162 1.6E-19 T 26-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 smi_1314 2bd3ff462e9f527bb435f8eff9eadb5e 237 PRINTS PR00123 ATP synthase A subunit signature 216 231 1.6E-19 T 26-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 smi_1314 2bd3ff462e9f527bb435f8eff9eadb5e 237 PRINTS PR00123 ATP synthase A subunit signature 163 185 1.6E-19 T 26-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 smi_1314 2bd3ff462e9f527bb435f8eff9eadb5e 237 Gene3D G3DSA:1.20.120.220 71 235 1.5E-37 T 26-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 smi_1314 2bd3ff462e9f527bb435f8eff9eadb5e 237 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 16 232 8.3E-40 T 26-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 smi_1314 2bd3ff462e9f527bb435f8eff9eadb5e 237 Pfam PF00119 ATP synthase A chain 23 229 3.6E-47 T 26-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 smi_1314 2bd3ff462e9f527bb435f8eff9eadb5e 237 PANTHER PTHR11410:SF7 1 237 1.9E-58 T 26-04-2016 smi_1314 2bd3ff462e9f527bb435f8eff9eadb5e 237 Hamap MF_01393 ATP synthase subunit a [atpB]. 1 236 13.129 T 26-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 smi_1314 2bd3ff462e9f527bb435f8eff9eadb5e 237 SUPERFAMILY SSF81336 71 229 4.45E-34 T 26-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 smi_1314 2bd3ff462e9f527bb435f8eff9eadb5e 237 PANTHER PTHR11410 1 237 1.9E-58 T 26-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 smi_0687 6ef8d22d43c42f4fe44c120c464463ab 262 TIGRFAM TIGR02787 codY_Gpos: GTP-sensing transcriptional pleiotropic repressor CodY 4 257 8.9E-128 T 26-04-2016 IPR014154 GTP-sensing transcriptional pleiotropic repressor CodY GO:0003677|GO:0003700|GO:0005525|GO:0045892 smi_0687 6ef8d22d43c42f4fe44c120c464463ab 262 Gene3D G3DSA:1.10.10.10 201 259 4.5E-8 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain smi_0687 6ef8d22d43c42f4fe44c120c464463ab 262 Pfam PF08222 CodY helix-turn-helix domain 202 259 1.1E-34 T 26-04-2016 IPR013198 GTP-sensing helix-turn-helix, CodY, C-terminal smi_0687 6ef8d22d43c42f4fe44c120c464463ab 262 SUPERFAMILY SSF46785 171 260 1.76E-39 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain smi_0687 6ef8d22d43c42f4fe44c120c464463ab 262 Hamap MF_00621 GTP-sensing transcriptional pleiotropic repressor CodY [codY]. 1 262 127.535 T 26-04-2016 IPR014154 GTP-sensing transcriptional pleiotropic repressor CodY GO:0003677|GO:0003700|GO:0005525|GO:0045892 smi_0687 6ef8d22d43c42f4fe44c120c464463ab 262 PANTHER PTHR40062 2 262 7.9E-143 T 26-04-2016 smi_0687 6ef8d22d43c42f4fe44c120c464463ab 262 Pfam PF06018 CodY GAF-like domain 3 182 3.5E-73 T 26-04-2016 IPR010312 GTP-sensing transcriptional pleiotropic repressor CodY, N-terminal GO:0003677|GO:0005525 smi_0687 6ef8d22d43c42f4fe44c120c464463ab 262 PIRSF PIRSF011572 1 261 1.1E-120 T 26-04-2016 IPR014154 GTP-sensing transcriptional pleiotropic repressor CodY GO:0003677|GO:0003700|GO:0005525|GO:0045892 smi_1055 cf02e9b12c14140632ab3802ae465c31 217 PANTHER PTHR11264 3 215 1.8E-114 T 26-04-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 smi_1055 cf02e9b12c14140632ab3802ae465c31 217 Gene3D G3DSA:3.40.470.10 3 215 1.1E-90 T 26-04-2016 IPR005122 Uracil-DNA glycosylase-like smi_1055 cf02e9b12c14140632ab3802ae465c31 217 SUPERFAMILY SSF52141 3 215 5.23E-85 T 26-04-2016 IPR005122 Uracil-DNA glycosylase-like smi_1055 cf02e9b12c14140632ab3802ae465c31 217 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 4 209 1.3E-76 T 26-04-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 smi_1055 cf02e9b12c14140632ab3802ae465c31 217 Pfam PF03167 Uracil DNA glycosylase superfamily 52 204 1.1E-22 T 26-04-2016 IPR005122 Uracil-DNA glycosylase-like smi_1055 cf02e9b12c14140632ab3802ae465c31 217 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 55 64 - T 26-04-2016 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 smi_1055 cf02e9b12c14140632ab3802ae465c31 217 SMART SM00987 47 205 1.8E-34 T 26-04-2016 smi_1055 cf02e9b12c14140632ab3802ae465c31 217 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 3 216 38.571 T 26-04-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 smi_1055 cf02e9b12c14140632ab3802ae465c31 217 SMART SM00986 47 205 1.8E-34 T 26-04-2016 IPR005122 Uracil-DNA glycosylase-like smi_0405 1e9767edb0cbadabaad4f64d1a7113cd 208 Gene3D G3DSA:2.40.50.140 92 205 3.3E-38 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold smi_0405 1e9767edb0cbadabaad4f64d1a7113cd 208 PANTHER PTHR10947 95 198 1.4E-20 T 26-04-2016 smi_0405 1e9767edb0cbadabaad4f64d1a7113cd 208 Pfam PF01588 Putative tRNA binding domain 96 198 4.9E-17 T 26-04-2016 IPR002547 tRNA-binding domain GO:0000049 Reactome: REACT_71 smi_0405 1e9767edb0cbadabaad4f64d1a7113cd 208 SUPERFAMILY SSF50249 94 200 9.3E-28 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold smi_0405 1e9767edb0cbadabaad4f64d1a7113cd 208 Gene3D G3DSA:3.30.1940.10 20 91 1.3E-28 T 26-04-2016 IPR027855 Domain of unknown function DUF4479 smi_0405 1e9767edb0cbadabaad4f64d1a7113cd 208 PANTHER PTHR10947:SF0 95 198 1.4E-20 T 26-04-2016 smi_0405 1e9767edb0cbadabaad4f64d1a7113cd 208 Pfam PF14794 Domain of unknown function (DUF4479) 23 91 2.4E-27 T 26-04-2016 IPR027855 Domain of unknown function DUF4479 smi_1527 cbe4a1fef6a83e5189f7167462bd0d36 395 PANTHER PTHR11751 13 390 3.3E-154 T 26-04-2016 smi_1527 cbe4a1fef6a83e5189f7167462bd0d36 395 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 115 136 4.6E-13 T 26-04-2016 smi_1527 cbe4a1fef6a83e5189f7167462bd0d36 395 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 198 221 4.6E-13 T 26-04-2016 smi_1527 cbe4a1fef6a83e5189f7167462bd0d36 395 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 229 253 4.6E-13 T 26-04-2016 smi_1527 cbe4a1fef6a83e5189f7167462bd0d36 395 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 162 186 4.6E-13 T 26-04-2016 smi_1527 cbe4a1fef6a83e5189f7167462bd0d36 395 SUPERFAMILY SSF53383 1 391 2.04E-111 T 26-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase smi_1527 cbe4a1fef6a83e5189f7167462bd0d36 395 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 235 248 - T 26-04-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Reactome: REACT_13 smi_1527 cbe4a1fef6a83e5189f7167462bd0d36 395 Pfam PF00155 Aminotransferase class I and II 31 386 3.1E-71 T 26-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 smi_1527 cbe4a1fef6a83e5189f7167462bd0d36 395 Gene3D G3DSA:3.90.1150.10 273 391 2.4E-43 T 26-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 smi_1527 cbe4a1fef6a83e5189f7167462bd0d36 395 Gene3D G3DSA:3.40.640.10 47 272 4.6E-74 T 26-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 smi_1527 cbe4a1fef6a83e5189f7167462bd0d36 395 PANTHER PTHR11751:SF306 13 390 3.3E-154 T 26-04-2016 smi_1450 e44e25490b0e9ec6e2be50138330e6a4 213 Gene3D G3DSA:3.40.50.300 1 206 4.4E-61 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1450 e44e25490b0e9ec6e2be50138330e6a4 213 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 26-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 smi_1450 e44e25490b0e9ec6e2be50138330e6a4 213 Pfam PF00005 ABC transporter 18 164 2.6E-31 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 smi_1450 e44e25490b0e9ec6e2be50138330e6a4 213 PANTHER PTHR24220 3 205 3.4E-69 T 26-04-2016 smi_1450 e44e25490b0e9ec6e2be50138330e6a4 213 SMART SM00382 26 211 4.0E-13 T 26-04-2016 IPR003593 AAA+ ATPase domain smi_1450 e44e25490b0e9ec6e2be50138330e6a4 213 TIGRFAM TIGR03608 L_ocin_972_ABC: putative bacteriocin export ABC transporter, lactococcin 972 group 4 207 1.0E-85 T 26-04-2016 IPR019895 Putative bacteriocin export ABC transporter, lactococcin 972 group smi_1450 e44e25490b0e9ec6e2be50138330e6a4 213 SUPERFAMILY SSF52540 2 207 2.11E-58 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0917 ce9345a9193a99f808079f42b4bcd9ed 408 PANTHER PTHR11601:SF17 7 405 1.3E-203 T 26-04-2016 smi_0917 ce9345a9193a99f808079f42b4bcd9ed 408 Gene3D G3DSA:3.90.1150.10 282 399 7.8E-29 T 26-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 smi_0917 ce9345a9193a99f808079f42b4bcd9ed 408 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 214 233 - T 26-04-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site smi_0917 ce9345a9193a99f808079f42b4bcd9ed 408 PIRSF PIRSF005572 21 405 1.8E-48 T 26-04-2016 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 smi_0917 ce9345a9193a99f808079f42b4bcd9ed 408 Gene3D G3DSA:3.40.640.10 36 281 5.2E-85 T 26-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 smi_0917 ce9345a9193a99f808079f42b4bcd9ed 408 TIGRFAM TIGR01979 sufS: cysteine desulfurase, SufS family 6 404 2.1E-182 T 26-04-2016 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 smi_0917 ce9345a9193a99f808079f42b4bcd9ed 408 PANTHER PTHR11601 7 405 1.3E-203 T 26-04-2016 smi_0917 ce9345a9193a99f808079f42b4bcd9ed 408 Pfam PF00266 Aminotransferase class-V 24 393 6.5E-151 T 26-04-2016 IPR000192 Aminotransferase class V domain smi_0917 ce9345a9193a99f808079f42b4bcd9ed 408 SUPERFAMILY SSF53383 3 400 2.02E-126 T 26-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase smi_1929 fb4d6ab85fa1ca0b2095450faf15b176 187 Pfam PF03352 Methyladenine glycosylase 7 181 7.8E-75 T 26-04-2016 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 smi_1929 fb4d6ab85fa1ca0b2095450faf15b176 187 Gene3D G3DSA:1.10.340.30 3 183 3.9E-79 T 26-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 smi_1929 fb4d6ab85fa1ca0b2095450faf15b176 187 PANTHER PTHR30037 1 183 2.4E-103 T 26-04-2016 smi_1929 fb4d6ab85fa1ca0b2095450faf15b176 187 PANTHER PTHR30037:SF4 1 183 2.4E-103 T 26-04-2016 smi_1929 fb4d6ab85fa1ca0b2095450faf15b176 187 SUPERFAMILY SSF48150 3 184 1.96E-76 T 26-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 smi_0536 a51cbfdba104a0193090910aaedad528 581 Gene3D G3DSA:1.20.1560.10 6 320 5.7E-70 T 26-04-2016 smi_0536 a51cbfdba104a0193090910aaedad528 581 SUPERFAMILY SSF90123 6 324 6.02E-75 T 26-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 smi_0536 a51cbfdba104a0193090910aaedad528 581 ProSitePatterns PS00211 ABC transporters family signature. 472 486 - T 26-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 smi_0536 a51cbfdba104a0193090910aaedad528 581 Pfam PF00005 ABC transporter 351 498 4.0E-30 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 smi_0536 a51cbfdba104a0193090910aaedad528 581 Gene3D G3DSA:3.40.50.300 342 563 9.0E-69 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0536 a51cbfdba104a0193090910aaedad528 581 PANTHER PTHR24221 1 579 1.4E-203 T 26-04-2016 smi_0536 a51cbfdba104a0193090910aaedad528 581 Pfam PF00664 ABC transporter transmembrane region 19 291 6.5E-41 T 26-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 smi_0536 a51cbfdba104a0193090910aaedad528 581 PANTHER PTHR24221:SF240 1 579 1.4E-203 T 26-04-2016 smi_0536 a51cbfdba104a0193090910aaedad528 581 SUPERFAMILY SSF52540 335 571 1.2E-80 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0536 a51cbfdba104a0193090910aaedad528 581 SMART SM00382 360 552 2.2E-14 T 26-04-2016 IPR003593 AAA+ ATPase domain smi_0007 83baed9677267564b7d680e3f5a08b25 88 SMART SM00363 1 62 7.7E-8 T 26-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 smi_0007 83baed9677267564b7d680e3f5a08b25 88 SUPERFAMILY SSF55174 1 77 6.12E-20 T 26-04-2016 smi_0007 83baed9677267564b7d680e3f5a08b25 88 Pfam PF01479 S4 domain 1 47 3.3E-9 T 26-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 smi_0007 83baed9677267564b7d680e3f5a08b25 88 Gene3D G3DSA:3.10.290.10 1 85 6.5E-23 T 26-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 smi_0007 83baed9677267564b7d680e3f5a08b25 88 PIRSF PIRSF038881 1 88 4.3E-40 T 26-04-2016 IPR025490 RNA-binding protein, HP1423 type smi_1852 fa83f556577fe4573f5240fa9c622023 617 SUPERFAMILY SSF55826 256 423 2.62E-33 T 26-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 smi_1852 fa83f556577fe4573f5240fa9c622023 617 Gene3D G3DSA:3.40.50.800 514 616 2.6E-25 T 26-04-2016 IPR004154 Anticodon-binding smi_1852 fa83f556577fe4573f5240fa9c622023 617 SUPERFAMILY SSF52954 511 612 9.98E-26 T 26-04-2016 IPR004154 Anticodon-binding smi_1852 fa83f556577fe4573f5240fa9c622023 617 Gene3D G3DSA:3.30.930.10 1 228 3.7E-88 T 26-04-2016 smi_1852 fa83f556577fe4573f5240fa9c622023 617 Gene3D G3DSA:3.30.930.10 441 494 3.7E-88 T 26-04-2016 smi_1852 fa83f556577fe4573f5240fa9c622023 617 Pfam PF04073 Aminoacyl-tRNA editing domain 295 414 2.0E-28 T 26-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 smi_1852 fa83f556577fe4573f5240fa9c622023 617 PANTHER PTHR11451:SF3 433 614 6.2E-131 T 26-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 smi_1852 fa83f556577fe4573f5240fa9c622023 617 PANTHER PTHR11451:SF3 255 282 6.2E-131 T 26-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 smi_1852 fa83f556577fe4573f5240fa9c622023 617 PANTHER PTHR11451:SF3 4 216 6.2E-131 T 26-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 smi_1852 fa83f556577fe4573f5240fa9c622023 617 Gene3D G3DSA:3.90.960.10 291 422 8.1E-35 T 26-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 smi_1852 fa83f556577fe4573f5240fa9c622023 617 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 253 611 9.1E-95 T 26-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 smi_1852 fa83f556577fe4573f5240fa9c622023 617 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 216 8.8E-97 T 26-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 smi_1852 fa83f556577fe4573f5240fa9c622023 617 PANTHER PTHR11451 433 614 6.2E-131 T 26-04-2016 smi_1852 fa83f556577fe4573f5240fa9c622023 617 PANTHER PTHR11451 255 282 6.2E-131 T 26-04-2016 smi_1852 fa83f556577fe4573f5240fa9c622023 617 PANTHER PTHR11451 4 216 6.2E-131 T 26-04-2016 smi_1852 fa83f556577fe4573f5240fa9c622023 617 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 616 38.344 T 26-04-2016 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 smi_1852 fa83f556577fe4573f5240fa9c622023 617 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 94 493 6.1E-59 T 26-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 smi_1852 fa83f556577fe4573f5240fa9c622023 617 Pfam PF03129 Anticodon binding domain 522 611 1.4E-16 T 26-04-2016 IPR004154 Anticodon-binding smi_1852 fa83f556577fe4573f5240fa9c622023 617 SUPERFAMILY SSF55681 9 228 7.96E-85 T 26-04-2016 smi_1852 fa83f556577fe4573f5240fa9c622023 617 SUPERFAMILY SSF55681 441 524 7.96E-85 T 26-04-2016 smi_1852 fa83f556577fe4573f5240fa9c622023 617 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 5.8E-15 T 26-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 smi_1852 fa83f556577fe4573f5240fa9c622023 617 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 5.8E-15 T 26-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 smi_1852 fa83f556577fe4573f5240fa9c622023 617 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 5.8E-15 T 26-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 smi_1852 fa83f556577fe4573f5240fa9c622023 617 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 5.8E-15 T 26-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 smi_0292 1da88394b5bbe7a04063069ca4f6eb74 614 PANTHER PTHR11785 25 477 1.7E-157 T 26-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 smi_0292 1da88394b5bbe7a04063069ca4f6eb74 614 PANTHER PTHR11785 497 519 1.7E-157 T 26-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 smi_0292 1da88394b5bbe7a04063069ca4f6eb74 614 Pfam PF13520 Amino acid permease 28 449 4.6E-31 T 26-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 smi_0292 1da88394b5bbe7a04063069ca4f6eb74 614 PANTHER PTHR11785:SF125 25 477 1.7E-157 T 26-04-2016 smi_0292 1da88394b5bbe7a04063069ca4f6eb74 614 PANTHER PTHR11785:SF125 497 519 1.7E-157 T 26-04-2016 smi_1601 b7f75a203fbc23609eaf680daa3d509d 536 PANTHER PTHR33408:SF1 1 489 6.7E-102 T 26-04-2016 smi_1601 b7f75a203fbc23609eaf680daa3d509d 536 Pfam PF01609 Transposase DDE domain 239 486 1.7E-26 T 26-04-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 smi_1601 b7f75a203fbc23609eaf680daa3d509d 536 Pfam PF05598 Transposase domain (DUF772) 22 82 9.0E-10 T 26-04-2016 IPR008490 Transposase InsH, N-terminal smi_1601 b7f75a203fbc23609eaf680daa3d509d 536 PANTHER PTHR33408 1 489 6.7E-102 T 26-04-2016 smi_0798 f1c203b9a0f4644807085a7f245d2e60 296 Gene3D G3DSA:3.30.420.40 2 139 3.9E-38 T 26-04-2016 smi_0798 f1c203b9a0f4644807085a7f245d2e60 296 Gene3D G3DSA:3.30.420.40 140 265 4.2E-34 T 26-04-2016 smi_0798 f1c203b9a0f4644807085a7f245d2e60 296 SUPERFAMILY SSF53067 1 293 1.16E-56 T 26-04-2016 smi_0798 f1c203b9a0f4644807085a7f245d2e60 296 PANTHER PTHR18964:SF123 1 295 6.6E-58 T 26-04-2016 smi_0798 f1c203b9a0f4644807085a7f245d2e60 296 Pfam PF00480 ROK family 4 286 2.5E-44 T 26-04-2016 IPR000600 ROK family smi_0798 f1c203b9a0f4644807085a7f245d2e60 296 PANTHER PTHR18964 1 295 6.6E-58 T 26-04-2016 smi_0586 0f562fa68bcf92d67c868c1ea4d5c28e 436 SUPERFAMILY SSF52540 138 435 2.15E-69 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0586 0f562fa68bcf92d67c868c1ea4d5c28e 436 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 4 432 4.4E-174 T 26-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 smi_0586 0f562fa68bcf92d67c868c1ea4d5c28e 436 PIRSF PIRSF006485 2 436 4.3E-171 T 26-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 smi_0586 0f562fa68bcf92d67c868c1ea4d5c28e 436 Gene3D G3DSA:3.30.300.20 358 436 1.1E-37 T 26-04-2016 IPR015946 K homology domain-like, alpha/beta smi_0586 0f562fa68bcf92d67c868c1ea4d5c28e 436 Hamap MF_00195 GTPase Der [der]. 3 436 40.087 T 26-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 smi_0586 0f562fa68bcf92d67c868c1ea4d5c28e 436 PANTHER PTHR11649:SF5 1 436 9.2E-150 T 26-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 smi_0586 0f562fa68bcf92d67c868c1ea4d5c28e 436 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 353 433 4.8E-33 T 26-04-2016 IPR032859 GTPase Der, C-terminal KH-domain-like smi_0586 0f562fa68bcf92d67c868c1ea4d5c28e 436 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 175 343 1.4E-25 T 26-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 smi_0586 0f562fa68bcf92d67c868c1ea4d5c28e 436 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 125 4.6E-23 T 26-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 smi_0586 0f562fa68bcf92d67c868c1ea4d5c28e 436 SUPERFAMILY SSF52540 4 169 5.77E-47 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0586 0f562fa68bcf92d67c868c1ea4d5c28e 436 Pfam PF01926 50S ribosome-binding GTPase 177 295 1.5E-25 T 26-04-2016 IPR006073 GTP binding domain GO:0005525 smi_0586 0f562fa68bcf92d67c868c1ea4d5c28e 436 Pfam PF01926 50S ribosome-binding GTPase 6 120 5.2E-26 T 26-04-2016 IPR006073 GTP binding domain GO:0005525 smi_0586 0f562fa68bcf92d67c868c1ea4d5c28e 436 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 6 26 6.4E-6 T 26-04-2016 IPR006073 GTP binding domain GO:0005525 smi_0586 0f562fa68bcf92d67c868c1ea4d5c28e 436 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 73 91 6.4E-6 T 26-04-2016 IPR006073 GTP binding domain GO:0005525 smi_0586 0f562fa68bcf92d67c868c1ea4d5c28e 436 Gene3D G3DSA:3.40.50.300 3 170 1.2E-44 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0586 0f562fa68bcf92d67c868c1ea4d5c28e 436 Gene3D G3DSA:3.40.50.300 171 357 1.2E-55 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0586 0f562fa68bcf92d67c868c1ea4d5c28e 436 PANTHER PTHR11649 1 436 9.2E-150 T 26-04-2016 smi_0009 7debf64ef779ca501173c5f6144d8ec9 422 Gene3D G3DSA:3.40.710.10 176 421 2.3E-51 T 26-04-2016 IPR012338 Beta-lactamase/transpeptidase-like smi_0009 7debf64ef779ca501173c5f6144d8ec9 422 SUPERFAMILY SSF56601 186 420 1.08E-33 T 26-04-2016 IPR012338 Beta-lactamase/transpeptidase-like smi_0009 7debf64ef779ca501173c5f6144d8ec9 422 Pfam PF13354 Beta-lactamase enzyme family 207 399 6.0E-37 T 26-04-2016 smi_0750 f0337aaafacd7c5f9add020b36a1d49f 484 PIRSF PIRSF001021 1 484 8.3E-224 T 26-04-2016 IPR013776 Alpha-amylase, thermostable GO:0004553|GO:0005509|GO:0005975 KEGG: 00500+3.2.1.1 smi_0750 f0337aaafacd7c5f9add020b36a1d49f 484 Gene3D G3DSA:2.60.40.1180 399 480 2.1E-34 T 26-04-2016 IPR013780 Glycosyl hydrolase, all-beta smi_0750 f0337aaafacd7c5f9add020b36a1d49f 484 Pfam PF09154 Domain of unknown function (DUF1939) 424 479 1.3E-13 T 26-04-2016 IPR015237 Alpha-amylase C-terminal, prokaryotic GO:0004553 smi_0750 f0337aaafacd7c5f9add020b36a1d49f 484 PANTHER PTHR10357 3 109 3.8E-170 T 26-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 smi_0750 f0337aaafacd7c5f9add020b36a1d49f 484 PANTHER PTHR10357 140 480 3.8E-170 T 26-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 smi_0750 f0337aaafacd7c5f9add020b36a1d49f 484 Pfam PF00128 Alpha amylase, catalytic domain 29 375 8.3E-33 T 26-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 smi_0750 f0337aaafacd7c5f9add020b36a1d49f 484 SUPERFAMILY SSF51445 4 377 1.27E-101 T 26-04-2016 IPR017853 Glycoside hydrolase superfamily smi_0750 f0337aaafacd7c5f9add020b36a1d49f 484 PRINTS PR00110 Alpha-amylase signature 93 104 9.7E-5 T 26-04-2016 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: REACT_474 smi_0750 f0337aaafacd7c5f9add020b36a1d49f 484 PRINTS PR00110 Alpha-amylase signature 321 333 9.7E-5 T 26-04-2016 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: REACT_474 smi_0750 f0337aaafacd7c5f9add020b36a1d49f 484 SMART SM00642 4 392 1.7E-68 T 26-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 smi_0750 f0337aaafacd7c5f9add020b36a1d49f 484 SUPERFAMILY SSF51011 396 480 4.32E-32 T 26-04-2016 smi_0750 f0337aaafacd7c5f9add020b36a1d49f 484 PANTHER PTHR10357:SF156 3 109 3.8E-170 T 26-04-2016 smi_0750 f0337aaafacd7c5f9add020b36a1d49f 484 PANTHER PTHR10357:SF156 140 480 3.8E-170 T 26-04-2016 smi_0750 f0337aaafacd7c5f9add020b36a1d49f 484 Gene3D G3DSA:3.20.20.80 2 398 3.0E-79 T 26-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 smi_1521 e0160229f3ee1f2aeec1b68b16ae1f7b 79 PANTHER PTHR13479 10 79 1.1E-32 T 26-04-2016 smi_1521 e0160229f3ee1f2aeec1b68b16ae1f7b 79 Pfam PF01084 Ribosomal protein S18 22 73 7.6E-29 T 26-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_1521 e0160229f3ee1f2aeec1b68b16ae1f7b 79 SUPERFAMILY SSF46911 6 78 2.75E-30 T 26-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_1521 e0160229f3ee1f2aeec1b68b16ae1f7b 79 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 6 78 22.528 T 26-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_1521 e0160229f3ee1f2aeec1b68b16ae1f7b 79 PRINTS PR00974 Ribosomal protein S18 family signature 33 43 8.7E-21 T 26-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_1521 e0160229f3ee1f2aeec1b68b16ae1f7b 79 PRINTS PR00974 Ribosomal protein S18 family signature 43 50 8.7E-21 T 26-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_1521 e0160229f3ee1f2aeec1b68b16ae1f7b 79 PRINTS PR00974 Ribosomal protein S18 family signature 51 65 8.7E-21 T 26-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_1521 e0160229f3ee1f2aeec1b68b16ae1f7b 79 PRINTS PR00974 Ribosomal protein S18 family signature 65 75 8.7E-21 T 26-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_1521 e0160229f3ee1f2aeec1b68b16ae1f7b 79 ProSitePatterns PS00057 Ribosomal protein S18 signature. 26 49 - T 26-04-2016 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_1521 e0160229f3ee1f2aeec1b68b16ae1f7b 79 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 25 78 4.0E-25 T 26-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_1521 e0160229f3ee1f2aeec1b68b16ae1f7b 79 TIGRFAM TIGR00165 S18: ribosomal protein bS18 9 77 1.7E-31 T 26-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_1521 e0160229f3ee1f2aeec1b68b16ae1f7b 79 Gene3D G3DSA:4.10.640.10 13 78 8.0E-34 T 26-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_1872 704e9b03678bff07450d4c07b9258360 833 PANTHER PTHR11946:SF7 609 832 0.0 T 26-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 smi_1872 704e9b03678bff07450d4c07b9258360 833 PANTHER PTHR11946:SF7 240 265 0.0 T 26-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 smi_1872 704e9b03678bff07450d4c07b9258360 833 PANTHER PTHR11946:SF7 4 207 0.0 T 26-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 smi_1872 704e9b03678bff07450d4c07b9258360 833 PANTHER PTHR11946:SF7 471 575 0.0 T 26-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 smi_1872 704e9b03678bff07450d4c07b9258360 833 PANTHER PTHR11946:SF7 288 453 0.0 T 26-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 smi_1872 704e9b03678bff07450d4c07b9258360 833 SUPERFAMILY SSF52374 413 658 2.17E-137 T 26-04-2016 smi_1872 704e9b03678bff07450d4c07b9258360 833 SUPERFAMILY SSF52374 3 226 2.17E-137 T 26-04-2016 smi_1872 704e9b03678bff07450d4c07b9258360 833 Gene3D G3DSA:3.90.740.10 223 421 3.9E-61 T 26-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 smi_1872 704e9b03678bff07450d4c07b9258360 833 Pfam PF09334 tRNA synthetases class I (M) 40 165 1.4E-16 T 26-04-2016 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 smi_1872 704e9b03678bff07450d4c07b9258360 833 SUPERFAMILY SSF47323 653 833 4.67E-32 T 26-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 smi_1872 704e9b03678bff07450d4c07b9258360 833 Gene3D G3DSA:3.40.50.620 609 638 5.7E-159 T 26-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold smi_1872 704e9b03678bff07450d4c07b9258360 833 Gene3D G3DSA:3.40.50.620 3 222 5.7E-159 T 26-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold smi_1872 704e9b03678bff07450d4c07b9258360 833 Gene3D G3DSA:3.40.50.620 422 574 5.7E-159 T 26-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold smi_1872 704e9b03678bff07450d4c07b9258360 833 PRINTS PR00985 Leucyl-tRNA synthetase signature 186 199 2.1E-54 T 26-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 smi_1872 704e9b03678bff07450d4c07b9258360 833 PRINTS PR00985 Leucyl-tRNA synthetase signature 525 547 2.1E-54 T 26-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 smi_1872 704e9b03678bff07450d4c07b9258360 833 PRINTS PR00985 Leucyl-tRNA synthetase signature 153 169 2.1E-54 T 26-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 smi_1872 704e9b03678bff07450d4c07b9258360 833 PRINTS PR00985 Leucyl-tRNA synthetase signature 215 234 2.1E-54 T 26-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 smi_1872 704e9b03678bff07450d4c07b9258360 833 PRINTS PR00985 Leucyl-tRNA synthetase signature 486 504 2.1E-54 T 26-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 smi_1872 704e9b03678bff07450d4c07b9258360 833 PRINTS PR00985 Leucyl-tRNA synthetase signature 558 568 2.1E-54 T 26-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 smi_1872 704e9b03678bff07450d4c07b9258360 833 PRINTS PR00985 Leucyl-tRNA synthetase signature 127 144 2.1E-54 T 26-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 smi_1872 704e9b03678bff07450d4c07b9258360 833 SUPERFAMILY SSF50677 226 412 8.69E-56 T 26-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 smi_1872 704e9b03678bff07450d4c07b9258360 833 PANTHER PTHR11946 609 832 0.0 T 26-04-2016 smi_1872 704e9b03678bff07450d4c07b9258360 833 PANTHER PTHR11946 240 265 0.0 T 26-04-2016 smi_1872 704e9b03678bff07450d4c07b9258360 833 PANTHER PTHR11946 4 207 0.0 T 26-04-2016 smi_1872 704e9b03678bff07450d4c07b9258360 833 PANTHER PTHR11946 471 575 0.0 T 26-04-2016 smi_1872 704e9b03678bff07450d4c07b9258360 833 PANTHER PTHR11946 288 453 0.0 T 26-04-2016 smi_1872 704e9b03678bff07450d4c07b9258360 833 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 3 832 22.591 T 26-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 smi_1872 704e9b03678bff07450d4c07b9258360 833 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 609 636 1.4E-6 T 26-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 smi_1872 704e9b03678bff07450d4c07b9258360 833 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 414 571 3.2E-5 T 26-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 smi_1872 704e9b03678bff07450d4c07b9258360 833 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 4 833 0.0 T 26-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 smi_1872 704e9b03678bff07450d4c07b9258360 833 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 221 401 2.2E-67 T 26-04-2016 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 smi_1872 704e9b03678bff07450d4c07b9258360 833 Gene3D G3DSA:1.10.730.10 639 768 6.2E-37 T 26-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 smi_1872 704e9b03678bff07450d4c07b9258360 833 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 43 53 - T 26-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 smi_1872 704e9b03678bff07450d4c07b9258360 833 Pfam PF08264 Anticodon-binding domain of tRNA 684 794 2.3E-17 T 26-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 smi_0678 8382b59847e2a4a1eb64bad1c3c422eb 153 Pfam PF07155 ECF-type riboflavin transporter, S component 5 151 8.9E-33 T 26-04-2016 IPR009825 ECF transporter, substrate-specific component-like GO:0016020 smi_0678 8382b59847e2a4a1eb64bad1c3c422eb 153 PANTHER PTHR37815 1 153 6.9E-51 T 26-04-2016 smi_0678 8382b59847e2a4a1eb64bad1c3c422eb 153 PANTHER PTHR37815:SF1 1 153 6.9E-51 T 26-04-2016 smi_0262 ea38f7e6aabf9b84379cb0a3bcc81497 156 PIRSF PIRSF002122 2 156 3.8E-55 T 26-04-2016 IPR000235 Ribosomal protein S5/S7 GO:0006412 smi_0262 ea38f7e6aabf9b84379cb0a3bcc81497 156 SUPERFAMILY SSF47973 1 149 7.33E-60 T 26-04-2016 IPR023798 Ribosomal protein S7 domain smi_0262 ea38f7e6aabf9b84379cb0a3bcc81497 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 2.2E-65 T 26-04-2016 IPR023798 Ribosomal protein S7 domain smi_0262 ea38f7e6aabf9b84379cb0a3bcc81497 156 PANTHER PTHR11205 1 156 1.2E-89 T 26-04-2016 IPR000235 Ribosomal protein S5/S7 GO:0006412 smi_0262 ea38f7e6aabf9b84379cb0a3bcc81497 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 35.486 T 26-04-2016 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 smi_0262 ea38f7e6aabf9b84379cb0a3bcc81497 156 Gene3D G3DSA:1.10.455.10 7 156 9.8E-66 T 26-04-2016 IPR023798 Ribosomal protein S7 domain smi_0262 ea38f7e6aabf9b84379cb0a3bcc81497 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 156 5.5E-69 T 26-04-2016 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 smi_0262 ea38f7e6aabf9b84379cb0a3bcc81497 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 26-04-2016 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 smi_1448 be32439755cb20261ee127e07a61bea8 352 PANTHER PTHR21015 1 352 8.4E-193 T 26-04-2016 smi_1448 be32439755cb20261ee127e07a61bea8 352 Gene3D G3DSA:3.40.50.2000 1 190 2.1E-54 T 26-04-2016 smi_1448 be32439755cb20261ee127e07a61bea8 352 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 4 351 23.823 T 26-04-2016 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 smi_1448 be32439755cb20261ee127e07a61bea8 352 PANTHER PTHR21015:SF27 1 352 8.4E-193 T 26-04-2016 smi_1448 be32439755cb20261ee127e07a61bea8 352 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 4 143 1.1E-41 T 26-04-2016 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 smi_1448 be32439755cb20261ee127e07a61bea8 352 SUPERFAMILY SSF53756 2 335 2.09E-81 T 26-04-2016 smi_1448 be32439755cb20261ee127e07a61bea8 352 Gene3D G3DSA:3.40.50.2000 191 330 1.2E-22 T 26-04-2016 smi_1448 be32439755cb20261ee127e07a61bea8 352 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 188 340 1.3E-34 T 26-04-2016 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 smi_0550 9c2562d9f60d8620122cd9b52008e88d 67 PANTHER PTHR34977 1 67 1.0E-14 T 26-04-2016 smi_0550 9c2562d9f60d8620122cd9b52008e88d 67 Pfam PF05532 CsbD-like 3 52 3.8E-16 T 26-04-2016 IPR008462 CsbD-like smi_0550 9c2562d9f60d8620122cd9b52008e88d 67 SUPERFAMILY SSF69047 4 58 1.57E-10 T 26-04-2016 IPR008462 CsbD-like smi_0550 9c2562d9f60d8620122cd9b52008e88d 67 Gene3D G3DSA:1.10.1470.10 3 62 2.4E-19 T 26-04-2016 IPR008462 CsbD-like smi_1313 11c2d183bc4040271546673ab2d1f3d0 164 Hamap MF_01398 ATP synthase subunit b [atpF]. 1 161 13.158 T 26-04-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 smi_1313 11c2d183bc4040271546673ab2d1f3d0 164 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 16 161 2.3E-40 T 26-04-2016 IPR005864 ATPase, F0 complex, subunit B, bacterial GO:0015078|GO:0015986|GO:0045263 smi_1313 11c2d183bc4040271546673ab2d1f3d0 164 SUPERFAMILY SSF81573 68 126 3.66E-6 T 26-04-2016 IPR028987 F-type ATP synthase subunit B-like, membrane domain smi_1313 11c2d183bc4040271546673ab2d1f3d0 164 Pfam PF00430 ATP synthase B/B' CF(0) 12 141 1.5E-30 T 26-04-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 smi_1313 11c2d183bc4040271546673ab2d1f3d0 164 PANTHER PTHR33445 9 164 1.9E-41 T 26-04-2016 smi_1644 415766c9773b934a201d580ba5794b76 317 PANTHER PTHR40064:SF1 1 317 1.5E-140 T 26-04-2016 smi_1644 415766c9773b934a201d580ba5794b76 317 Pfam PF06081 Aromatic acid exporter family member 1 1 141 1.4E-43 T 26-04-2016 IPR010343 Aromatic acid exporter family member 1 smi_1644 415766c9773b934a201d580ba5794b76 317 Pfam PF11728 Putative aromatic acid exporter C-terminal domain 145 308 1.2E-45 T 26-04-2016 IPR021062 Putative aromatic acid exporter, C-terminal smi_1644 415766c9773b934a201d580ba5794b76 317 PANTHER PTHR40064 1 317 1.5E-140 T 26-04-2016 smi_0142 f39ca7e262eb1b377646b3e6d4a356f6 303 SUPERFAMILY SSF103481 198 297 1.83E-7 T 26-04-2016 smi_0142 f39ca7e262eb1b377646b3e6d4a356f6 303 PANTHER PTHR22911:SF23 1 303 3.3E-62 T 26-04-2016 smi_0142 f39ca7e262eb1b377646b3e6d4a356f6 303 PANTHER PTHR22911 1 303 3.3E-62 T 26-04-2016 smi_0142 f39ca7e262eb1b377646b3e6d4a356f6 303 SUPERFAMILY SSF103481 47 152 7.19E-11 T 26-04-2016 smi_0142 f39ca7e262eb1b377646b3e6d4a356f6 303 Pfam PF00892 EamA-like transporter family 10 149 1.6E-17 T 26-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 smi_0142 f39ca7e262eb1b377646b3e6d4a356f6 303 Pfam PF00892 EamA-like transporter family 164 295 1.4E-8 T 26-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 smi_0693 e892b461a4fc82db92093215ee618c78 218 Gene3D G3DSA:1.10.10.10 122 217 3.5E-25 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain smi_0693 e892b461a4fc82db92093215ee618c78 218 PANTHER PTHR26402:SF511 1 217 1.7E-86 T 26-04-2016 smi_0693 e892b461a4fc82db92093215ee618c78 218 Pfam PF00486 Transcriptional regulatory protein, C terminal 143 215 3.9E-20 T 26-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 smi_0693 e892b461a4fc82db92093215ee618c78 218 SUPERFAMILY SSF52172 1 164 3.7E-39 T 26-04-2016 IPR011006 CheY-like superfamily smi_0693 e892b461a4fc82db92093215ee618c78 218 PANTHER PTHR26402 1 217 1.7E-86 T 26-04-2016 smi_0693 e892b461a4fc82db92093215ee618c78 218 Gene3D G3DSA:3.40.50.2300 1 118 3.6E-38 T 26-04-2016 smi_0693 e892b461a4fc82db92093215ee618c78 218 SMART SM00862 143 215 1.2E-22 T 26-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 smi_0693 e892b461a4fc82db92093215ee618c78 218 Pfam PF00072 Response regulator receiver domain 3 111 2.2E-27 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 smi_0693 e892b461a4fc82db92093215ee618c78 218 SMART SM00448 1 111 7.5E-40 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 smi_2075 8dda6423ee330cfca952600ebe6802c2 492 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 12 492 83.64 T 26-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 smi_2075 8dda6423ee330cfca952600ebe6802c2 492 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 300 312 - T 26-04-2016 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 Reactome: REACT_1698 smi_2075 8dda6423ee330cfca952600ebe6802c2 492 Pfam PF00571 CBS domain 161 206 3.7E-7 T 26-04-2016 IPR000644 CBS domain smi_2075 8dda6423ee330cfca952600ebe6802c2 492 Pfam PF00571 CBS domain 100 146 2.2E-7 T 26-04-2016 IPR000644 CBS domain smi_2075 8dda6423ee330cfca952600ebe6802c2 492 Gene3D G3DSA:3.20.20.70 9 491 1.2E-203 T 26-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 smi_2075 8dda6423ee330cfca952600ebe6802c2 492 SUPERFAMILY SSF54631 67 210 4.17E-30 T 26-04-2016 smi_2075 8dda6423ee330cfca952600ebe6802c2 492 SMART SM01240 11 479 0.0 T 26-04-2016 smi_2075 8dda6423ee330cfca952600ebe6802c2 492 PIRSF PIRSF000130 3 492 3.2E-208 T 26-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 smi_2075 8dda6423ee330cfca952600ebe6802c2 492 SMART SM00116 100 150 8.5E-7 T 26-04-2016 IPR000644 CBS domain smi_2075 8dda6423ee330cfca952600ebe6802c2 492 SMART SM00116 163 211 2.3E-9 T 26-04-2016 IPR000644 CBS domain smi_2075 8dda6423ee330cfca952600ebe6802c2 492 PANTHER PTHR11911 1 287 6.7E-246 T 26-04-2016 smi_2075 8dda6423ee330cfca952600ebe6802c2 492 PANTHER PTHR11911 305 492 6.7E-246 T 26-04-2016 smi_2075 8dda6423ee330cfca952600ebe6802c2 492 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 12 460 2.1E-193 T 26-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 smi_2075 8dda6423ee330cfca952600ebe6802c2 492 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 12 479 9.5E-160 T 26-04-2016 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 Reactome: REACT_1698 smi_2075 8dda6423ee330cfca952600ebe6802c2 492 SUPERFAMILY SSF51412 7 94 7.59E-123 T 26-04-2016 smi_2075 8dda6423ee330cfca952600ebe6802c2 492 SUPERFAMILY SSF51412 222 483 7.59E-123 T 26-04-2016 smi_2075 8dda6423ee330cfca952600ebe6802c2 492 PANTHER PTHR11911:SF6 1 287 6.7E-246 T 26-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 smi_2075 8dda6423ee330cfca952600ebe6802c2 492 PANTHER PTHR11911:SF6 305 492 6.7E-246 T 26-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 smi_0334 fafe7e19c8909ed705672a47b0303d3d 173 SUPERFAMILY SSF56300 5 167 1.31E-47 T 26-04-2016 IPR029052 Metallo-dependent phosphatase-like smi_0334 fafe7e19c8909ed705672a47b0303d3d 173 PANTHER PTHR11124 1 160 2.9E-58 T 26-04-2016 IPR000979 Phosphodiesterase MJ0936/Vps29 smi_0334 fafe7e19c8909ed705672a47b0303d3d 173 PANTHER PTHR11124:SF14 1 160 2.9E-58 T 26-04-2016 smi_0334 fafe7e19c8909ed705672a47b0303d3d 173 TIGRFAM TIGR00040 yfcE: phosphodiesterase, MJ0936 family 6 150 2.0E-22 T 26-04-2016 IPR000979 Phosphodiesterase MJ0936/Vps29 smi_0334 fafe7e19c8909ed705672a47b0303d3d 173 Gene3D G3DSA:3.60.21.10 3 163 1.2E-44 T 26-04-2016 IPR029052 Metallo-dependent phosphatase-like smi_0334 fafe7e19c8909ed705672a47b0303d3d 173 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 6 149 1.1E-23 T 26-04-2016 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type smi_0074 5536dac483aca4bcfe2e493d37b8e623 163 Pfam PF00731 AIR carboxylase 6 151 8.1E-65 T 26-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 smi_0074 5536dac483aca4bcfe2e493d37b8e623 163 Gene3D G3DSA:3.40.50.7700 2 161 1.1E-75 T 26-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 smi_0074 5536dac483aca4bcfe2e493d37b8e623 163 SMART SM01001 4 155 2.2E-99 T 26-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 smi_0074 5536dac483aca4bcfe2e493d37b8e623 163 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 6 159 32.369 T 26-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 smi_0074 5536dac483aca4bcfe2e493d37b8e623 163 PANTHER PTHR23046:SF2 3 162 2.4E-91 T 26-04-2016 smi_0074 5536dac483aca4bcfe2e493d37b8e623 163 PIRSF PIRSF001338 1 163 1.3E-69 T 26-04-2016 IPR024694 N5-carboxyaminoimidazole ribonucleotide mutase PurE GO:0006189|GO:0034023 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234|UniPathway: UPA00074 smi_0074 5536dac483aca4bcfe2e493d37b8e623 163 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 6 157 4.2E-66 T 26-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 smi_0074 5536dac483aca4bcfe2e493d37b8e623 163 PANTHER PTHR23046 3 162 2.4E-91 T 26-04-2016 smi_0074 5536dac483aca4bcfe2e493d37b8e623 163 SUPERFAMILY SSF52255 5 159 5.62E-66 T 26-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 smi_1705 fbff8bf5024b9e8e7e8b50f8a5dfe86b 176 Pfam PF00583 Acetyltransferase (GNAT) family 77 156 7.1E-17 T 26-04-2016 IPR000182 GNAT domain GO:0008080 smi_1705 fbff8bf5024b9e8e7e8b50f8a5dfe86b 176 Gene3D G3DSA:3.40.630.30 54 159 4.0E-24 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase smi_1705 fbff8bf5024b9e8e7e8b50f8a5dfe86b 176 PANTHER PTHR23091 46 156 1.0E-16 T 26-04-2016 smi_1705 fbff8bf5024b9e8e7e8b50f8a5dfe86b 176 SUPERFAMILY SSF55729 54 159 1.61E-24 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase smi_1937 f51317fbbee10d3761ca6e26694459c9 428 Pfam PF00072 Response regulator receiver domain 4 114 3.7E-24 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 smi_1937 f51317fbbee10d3761ca6e26694459c9 428 SUPERFAMILY SSF46689 375 424 4.93E-13 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 smi_1937 f51317fbbee10d3761ca6e26694459c9 428 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 375 417 - T 26-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 smi_1937 f51317fbbee10d3761ca6e26694459c9 428 SMART SM00448 2 116 1.3E-23 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 smi_1937 f51317fbbee10d3761ca6e26694459c9 428 Gene3D G3DSA:1.10.10.60 320 374 7.0E-7 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 smi_1937 f51317fbbee10d3761ca6e26694459c9 428 PANTHER PTHR26402 2 158 9.1E-76 T 26-04-2016 smi_1937 f51317fbbee10d3761ca6e26694459c9 428 PANTHER PTHR26402:SF509 2 158 9.1E-76 T 26-04-2016 smi_1937 f51317fbbee10d3761ca6e26694459c9 428 Pfam PF12833 Helix-turn-helix domain 346 423 9.7E-19 T 26-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 smi_1937 f51317fbbee10d3761ca6e26694459c9 428 Gene3D G3DSA:1.10.10.60 375 423 3.0E-16 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 smi_1937 f51317fbbee10d3761ca6e26694459c9 428 Gene3D G3DSA:3.40.50.2300 1 126 9.8E-32 T 26-04-2016 smi_1937 f51317fbbee10d3761ca6e26694459c9 428 SUPERFAMILY SSF52172 1 122 6.83E-32 T 26-04-2016 IPR011006 CheY-like superfamily smi_1937 f51317fbbee10d3761ca6e26694459c9 428 SMART SM00342 338 421 2.4E-23 T 26-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 smi_1937 f51317fbbee10d3761ca6e26694459c9 428 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 405 421 5.8E-5 T 26-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 smi_1937 f51317fbbee10d3761ca6e26694459c9 428 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 390 405 5.8E-5 T 26-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 smi_1176 8c759ec571ec4027f6f69e337afbc8e8 449 SMART SM00387 323 435 8.4E-41 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain smi_1176 8c759ec571ec4027f6f69e337afbc8e8 449 Pfam PF00512 His Kinase A (phospho-acceptor) domain 209 273 2.7E-16 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 smi_1176 8c759ec571ec4027f6f69e337afbc8e8 449 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 91 208 5.0E-11 T 26-04-2016 IPR000014 PAS domain smi_1176 8c759ec571ec4027f6f69e337afbc8e8 449 PANTHER PTHR24423 1 448 4.4E-207 T 26-04-2016 smi_1176 8c759ec571ec4027f6f69e337afbc8e8 449 SMART SM00388 208 274 4.7E-20 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 smi_1176 8c759ec571ec4027f6f69e337afbc8e8 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 395 413 9.1E-21 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 smi_1176 8c759ec571ec4027f6f69e337afbc8e8 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 419 432 9.1E-21 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 smi_1176 8c759ec571ec4027f6f69e337afbc8e8 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 378 388 9.1E-21 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 smi_1176 8c759ec571ec4027f6f69e337afbc8e8 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 360 374 9.1E-21 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 smi_1176 8c759ec571ec4027f6f69e337afbc8e8 449 Gene3D G3DSA:1.10.287.130 200 261 5.1E-20 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 smi_1176 8c759ec571ec4027f6f69e337afbc8e8 449 Gene3D G3DSA:3.30.565.10 262 435 5.7E-50 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain smi_1176 8c759ec571ec4027f6f69e337afbc8e8 449 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 324 434 5.9E-29 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain smi_1176 8c759ec571ec4027f6f69e337afbc8e8 449 SMART SM00091 94 160 1.2E-10 T 26-04-2016 IPR000014 PAS domain smi_1176 8c759ec571ec4027f6f69e337afbc8e8 449 SUPERFAMILY SSF55874 264 433 3.54E-47 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain smi_1176 8c759ec571ec4027f6f69e337afbc8e8 449 Gene3D G3DSA:3.30.450.20 84 199 1.4E-13 T 26-04-2016 smi_1176 8c759ec571ec4027f6f69e337afbc8e8 449 Pfam PF00989 PAS fold 95 198 4.0E-11 T 26-04-2016 IPR013767 PAS fold GO:0006355 smi_1176 8c759ec571ec4027f6f69e337afbc8e8 449 SUPERFAMILY SSF55785 83 200 3.14E-14 T 26-04-2016 IPR000014 PAS domain smi_1176 8c759ec571ec4027f6f69e337afbc8e8 449 PANTHER PTHR24423:SF568 1 448 4.4E-207 T 26-04-2016 smi_1176 8c759ec571ec4027f6f69e337afbc8e8 449 SUPERFAMILY SSF47384 194 273 1.55E-18 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 smi_1253 cb154496d61a7538dbb24e7d73c2f0a4 110 Gene3D G3DSA:1.10.10.10 1 106 4.3E-42 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain smi_1253 cb154496d61a7538dbb24e7d73c2f0a4 110 PANTHER PTHR40083 2 110 7.8E-45 T 26-04-2016 smi_1253 cb154496d61a7538dbb24e7d73c2f0a4 110 SUPERFAMILY SSF88659 4 107 1.79E-33 T 26-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 smi_1253 cb154496d61a7538dbb24e7d73c2f0a4 110 Hamap MF_00245 UPF0122 protein . 3 103 21.261 T 26-04-2016 IPR007394 Putative helix-turn-helix protein, YlxM/p13-like smi_1253 cb154496d61a7538dbb24e7d73c2f0a4 110 Pfam PF04297 Putative helix-turn-helix protein, YlxM / p13 like 3 101 3.6E-42 T 26-04-2016 IPR007394 Putative helix-turn-helix protein, YlxM/p13-like smi_1477 a6c50babf1ee097e327c23cf1ae90fdf 279 Gene3D G3DSA:3.30.572.10 5 279 9.8E-66 T 26-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 smi_1477 a6c50babf1ee097e327c23cf1ae90fdf 279 PRINTS PR00108 Thymidylate synthase family signature 209 226 3.8E-14 T 26-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 smi_1477 a6c50babf1ee097e327c23cf1ae90fdf 279 PRINTS PR00108 Thymidylate synthase family signature 122 141 3.8E-14 T 26-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 smi_1477 a6c50babf1ee097e327c23cf1ae90fdf 279 PRINTS PR00108 Thymidylate synthase family signature 54 75 3.8E-14 T 26-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 smi_1477 a6c50babf1ee097e327c23cf1ae90fdf 279 PRINTS PR00108 Thymidylate synthase family signature 171 197 3.8E-14 T 26-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 smi_1477 a6c50babf1ee097e327c23cf1ae90fdf 279 Hamap MF_00008 Thymidylate synthase [thyA]. 5 279 31.363 T 26-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 smi_1477 a6c50babf1ee097e327c23cf1ae90fdf 279 PANTHER PTHR11548 12 279 3.5E-136 T 26-04-2016 smi_1477 a6c50babf1ee097e327c23cf1ae90fdf 279 PANTHER PTHR11548:SF1 12 279 3.5E-136 T 26-04-2016 smi_1477 a6c50babf1ee097e327c23cf1ae90fdf 279 ProSitePatterns PS00091 Thymidylate synthase active site. 133 162 - T 26-04-2016 IPR020940 Thymidylate synthase, active site GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 smi_1477 a6c50babf1ee097e327c23cf1ae90fdf 279 Pfam PF00303 Thymidylate synthase 8 279 1.3E-64 T 26-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 smi_1477 a6c50babf1ee097e327c23cf1ae90fdf 279 SUPERFAMILY SSF55831 3 278 8.51E-74 T 26-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 smi_1137 c61918e6cfc40356c232fd36b0ce2881 126 Pfam PF01741 Large-conductance mechanosensitive channel, MscL 1 123 2.0E-35 T 26-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 smi_1137 c61918e6cfc40356c232fd36b0ce2881 126 TIGRFAM TIGR00220 mscL: large conductance mechanosensitive channel protein 1 125 3.7E-33 T 26-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 smi_1137 c61918e6cfc40356c232fd36b0ce2881 126 PANTHER PTHR30266 1 126 2.0E-37 T 26-04-2016 smi_1137 c61918e6cfc40356c232fd36b0ce2881 126 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 75 83 2.9E-6 T 26-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 smi_1137 c61918e6cfc40356c232fd36b0ce2881 126 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 84 93 2.9E-6 T 26-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 smi_1137 c61918e6cfc40356c232fd36b0ce2881 126 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 4 18 2.9E-6 T 26-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 smi_1137 c61918e6cfc40356c232fd36b0ce2881 126 SUPERFAMILY SSF81330 10 119 4.84E-27 T 26-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 smi_1137 c61918e6cfc40356c232fd36b0ce2881 126 PANTHER PTHR30266:SF2 1 126 2.0E-37 T 26-04-2016 smi_0607 ea99b7b99371a813fde4fc9568f2b6f1 214 Pfam PF04854 Protein of unknown function, DUF624 30 101 5.7E-13 T 26-04-2016 IPR006938 Protein of unknown function DUF624 smi_0022 ca3208382b8ec7b2f08da2ac6b853b30 428 PANTHER PTHR11846 4 426 5.3E-259 T 26-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 smi_0022 ca3208382b8ec7b2f08da2ac6b853b30 428 Pfam PF00709 Adenylosuccinate synthetase 4 420 2.2E-183 T 26-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 smi_0022 ca3208382b8ec7b2f08da2ac6b853b30 428 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 5 425 3.2E-190 T 26-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 smi_0022 ca3208382b8ec7b2f08da2ac6b853b30 428 SUPERFAMILY SSF52540 1 427 1.7E-178 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0022 ca3208382b8ec7b2f08da2ac6b853b30 428 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 428 215.099 T 26-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 smi_0022 ca3208382b8ec7b2f08da2ac6b853b30 428 Gene3D G3DSA:3.90.170.10 265 423 1.1E-70 T 26-04-2016 smi_0022 ca3208382b8ec7b2f08da2ac6b853b30 428 SMART SM00788 3 422 1.3E-300 T 26-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 smi_0022 ca3208382b8ec7b2f08da2ac6b853b30 428 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 10 17 - T 26-04-2016 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 smi_0022 ca3208382b8ec7b2f08da2ac6b853b30 428 Gene3D G3DSA:3.40.440.10 1 93 4.5E-73 T 26-04-2016 smi_0022 ca3208382b8ec7b2f08da2ac6b853b30 428 Gene3D G3DSA:3.40.440.10 195 264 4.5E-73 T 26-04-2016 smi_0022 ca3208382b8ec7b2f08da2ac6b853b30 428 Gene3D G3DSA:1.10.300.10 100 194 2.4E-39 T 26-04-2016 smi_0022 ca3208382b8ec7b2f08da2ac6b853b30 428 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 131 142 - T 26-04-2016 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|UniPathway: UPA00075 smi_1719 9246e2b940371659c33e4fe77a9d63a2 205 PANTHER PTHR30055:SF92 1 95 1.8E-20 T 26-04-2016 smi_1719 9246e2b940371659c33e4fe77a9d63a2 205 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 14 27 2.2E-11 T 26-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 smi_1719 9246e2b940371659c33e4fe77a9d63a2 205 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 35 58 2.2E-11 T 26-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 smi_1719 9246e2b940371659c33e4fe77a9d63a2 205 PANTHER PTHR30055 1 95 1.8E-20 T 26-04-2016 smi_1719 9246e2b940371659c33e4fe77a9d63a2 205 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 57 6.0E-17 T 26-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 smi_1719 9246e2b940371659c33e4fe77a9d63a2 205 Gene3D G3DSA:1.10.10.60 6 60 2.4E-22 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 smi_1719 9246e2b940371659c33e4fe77a9d63a2 205 ProSitePatterns PS01081 TetR-type HTH domain signature. 26 57 - T 26-04-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site smi_1719 9246e2b940371659c33e4fe77a9d63a2 205 Gene3D G3DSA:1.10.357.10 61 198 3.5E-9 T 26-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 smi_1719 9246e2b940371659c33e4fe77a9d63a2 205 SUPERFAMILY SSF46689 6 79 1.33E-20 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 smi_1452 aa5383de4b3be5a9ef0a090a2067eeb3 418 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 41 85 5.4E-11 T 26-04-2016 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger smi_1452 aa5383de4b3be5a9ef0a090a2067eeb3 418 PANTHER PTHR33498:SF1 1 414 1.2E-170 T 26-04-2016 smi_1452 aa5383de4b3be5a9ef0a090a2067eeb3 418 Pfam PF01610 Transposase 156 400 1.4E-50 T 26-04-2016 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain smi_1452 aa5383de4b3be5a9ef0a090a2067eeb3 418 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 91 141 9.3E-10 T 26-04-2016 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain smi_1452 aa5383de4b3be5a9ef0a090a2067eeb3 418 PANTHER PTHR33498 1 414 1.2E-170 T 26-04-2016 smi_1452 aa5383de4b3be5a9ef0a090a2067eeb3 418 Gene3D G3DSA:1.10.10.60 103 140 1.1E-4 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 smi_0077 aa5383de4b3be5a9ef0a090a2067eeb3 418 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 41 85 5.4E-11 T 26-04-2016 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger smi_0077 aa5383de4b3be5a9ef0a090a2067eeb3 418 PANTHER PTHR33498:SF1 1 414 1.2E-170 T 26-04-2016 smi_0077 aa5383de4b3be5a9ef0a090a2067eeb3 418 Pfam PF01610 Transposase 156 400 1.4E-50 T 26-04-2016 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain smi_0077 aa5383de4b3be5a9ef0a090a2067eeb3 418 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 91 141 9.3E-10 T 26-04-2016 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain smi_0077 aa5383de4b3be5a9ef0a090a2067eeb3 418 PANTHER PTHR33498 1 414 1.2E-170 T 26-04-2016 smi_0077 aa5383de4b3be5a9ef0a090a2067eeb3 418 Gene3D G3DSA:1.10.10.60 103 140 1.1E-4 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 smi_0756 bb10bea5964989fcf9b864fb3f75f678 284 PANTHER PTHR21089 1 284 3.6E-93 T 26-04-2016 smi_0756 bb10bea5964989fcf9b864fb3f75f678 284 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 9 282 1.1E-70 T 26-04-2016 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 smi_0756 bb10bea5964989fcf9b864fb3f75f678 284 SUPERFAMILY SSF53223 3 106 2.59E-33 T 26-04-2016 smi_0756 bb10bea5964989fcf9b864fb3f75f678 284 Gene3D G3DSA:3.40.192.10 3 110 1.6E-40 T 26-04-2016 smi_0756 bb10bea5964989fcf9b864fb3f75f678 284 SUPERFAMILY SSF51735 107 281 1.29E-32 T 26-04-2016 IPR016040 NAD(P)-binding domain smi_0756 bb10bea5964989fcf9b864fb3f75f678 284 Gene3D G3DSA:3.40.50.720 111 283 4.5E-46 T 26-04-2016 IPR016040 NAD(P)-binding domain smi_0756 bb10bea5964989fcf9b864fb3f75f678 284 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 7 281 34.449 T 26-04-2016 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 smi_0756 bb10bea5964989fcf9b864fb3f75f678 284 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 12 94 1.6E-26 T 26-04-2016 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 smi_1132 445220c3bcea8158bdac72d693c3232e 311 PRINTS PR00146 Dihydrodipicolinate synthase signature 77 95 1.9E-30 T 26-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 smi_1132 445220c3bcea8158bdac72d693c3232e 311 PRINTS PR00146 Dihydrodipicolinate synthase signature 135 152 1.9E-30 T 26-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 smi_1132 445220c3bcea8158bdac72d693c3232e 311 PRINTS PR00146 Dihydrodipicolinate synthase signature 110 126 1.9E-30 T 26-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 smi_1132 445220c3bcea8158bdac72d693c3232e 311 PRINTS PR00146 Dihydrodipicolinate synthase signature 41 62 1.9E-30 T 26-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 smi_1132 445220c3bcea8158bdac72d693c3232e 311 Pfam PF00701 Dihydrodipicolinate synthetase family 10 288 1.1E-83 T 26-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 smi_1132 445220c3bcea8158bdac72d693c3232e 311 PANTHER PTHR12128 1 308 7.6E-125 T 26-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 smi_1132 445220c3bcea8158bdac72d693c3232e 311 PANTHER PTHR12128:SF34 1 308 7.6E-125 T 26-04-2016 smi_1132 445220c3bcea8158bdac72d693c3232e 311 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 140 170 - T 26-04-2016 IPR020625 Schiff base-forming aldolase, active site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 smi_1132 445220c3bcea8158bdac72d693c3232e 311 Gene3D G3DSA:3.20.20.70 11 291 7.3E-107 T 26-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 smi_1132 445220c3bcea8158bdac72d693c3232e 311 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 7 293 59.82 T 26-04-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 smi_1132 445220c3bcea8158bdac72d693c3232e 311 PIRSF PIRSF001365 7 302 6.9E-84 T 26-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 smi_1132 445220c3bcea8158bdac72d693c3232e 311 SUPERFAMILY SSF51569 11 291 3.45E-91 T 26-04-2016 smi_1132 445220c3bcea8158bdac72d693c3232e 311 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 11 291 5.2E-91 T 26-04-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 smi_1132 445220c3bcea8158bdac72d693c3232e 311 SMART SM01130 7 295 1.2E-114 T 26-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 smi_0459 a347465e65833eec1d33dc54605d27d9 427 ProDom PD032508 PHAGE-LIKE PBSX XKDK ELEMENT PHAGE LIN1278 SHEATH YQBL RELATED TAIL 302 427 2.0E-18 T 26-04-2016 IPR020287 Tail sheath protein, C-terminal domain smi_0459 a347465e65833eec1d33dc54605d27d9 427 Pfam PF04984 Phage tail sheath protein 1 424 7.1E-56 T 26-04-2016 IPR007067 Tail sheath protein smi_0093 d7bfa2d972ab2716d7447109dab88919 350 SMART SM00388 119 185 3.6E-13 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 smi_0093 d7bfa2d972ab2716d7447109dab88919 350 SUPERFAMILY SSF47384 104 179 2.55E-14 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 smi_0093 d7bfa2d972ab2716d7447109dab88919 350 PANTHER PTHR24423 68 348 2.2E-66 T 26-04-2016 smi_0093 d7bfa2d972ab2716d7447109dab88919 350 Gene3D G3DSA:1.10.287.130 111 168 9.3E-16 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 smi_0093 d7bfa2d972ab2716d7447109dab88919 350 PRINTS PR00344 Bacterial sensor protein C-terminal signature 329 342 3.4E-14 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 smi_0093 d7bfa2d972ab2716d7447109dab88919 350 PRINTS PR00344 Bacterial sensor protein C-terminal signature 305 323 3.4E-14 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 smi_0093 d7bfa2d972ab2716d7447109dab88919 350 PRINTS PR00344 Bacterial sensor protein C-terminal signature 288 298 3.4E-14 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 smi_0093 d7bfa2d972ab2716d7447109dab88919 350 PRINTS PR00344 Bacterial sensor protein C-terminal signature 270 284 3.4E-14 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 smi_0093 d7bfa2d972ab2716d7447109dab88919 350 Pfam PF00512 His Kinase A (phospho-acceptor) domain 120 179 2.4E-13 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 smi_0093 d7bfa2d972ab2716d7447109dab88919 350 Gene3D G3DSA:3.30.565.10 169 347 8.8E-41 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain smi_0093 d7bfa2d972ab2716d7447109dab88919 350 Pfam PF00672 HAMP domain 40 108 4.1E-12 T 26-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 smi_0093 d7bfa2d972ab2716d7447109dab88919 350 SMART SM00304 59 111 1.1E-8 T 26-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 smi_0093 d7bfa2d972ab2716d7447109dab88919 350 SMART SM00387 233 345 4.9E-34 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain smi_0093 d7bfa2d972ab2716d7447109dab88919 350 SUPERFAMILY SSF55874 185 342 3.14E-38 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain smi_0093 d7bfa2d972ab2716d7447109dab88919 350 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 233 343 5.8E-24 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain smi_1710 c2b9894bceed3e4b8c02ae5a3a6d8067 302 Gene3D G3DSA:3.30.460.10 9 151 1.5E-59 T 26-04-2016 smi_1710 c2b9894bceed3e4b8c02ae5a3a6d8067 302 Gene3D G3DSA:1.20.120.330 152 287 1.2E-56 T 26-04-2016 smi_1710 c2b9894bceed3e4b8c02ae5a3a6d8067 302 Pfam PF04439 Streptomycin adenylyltransferase 1 276 1.0E-119 T 26-04-2016 IPR007530 Aminoglycoside 6-adenylyltransferase smi_1710 c2b9894bceed3e4b8c02ae5a3a6d8067 302 PIRSF PIRSF000812 1 282 1.4E-129 T 26-04-2016 IPR007530 Aminoglycoside 6-adenylyltransferase smi_1710 c2b9894bceed3e4b8c02ae5a3a6d8067 302 SUPERFAMILY SSF81631 136 280 7.3E-58 T 26-04-2016 smi_1710 c2b9894bceed3e4b8c02ae5a3a6d8067 302 SUPERFAMILY SSF81301 1 131 2.75E-47 T 26-04-2016 smi_2078 35587f5a366a0e5a5d74cf7e6821bb90 847 PANTHER PTHR38454:SF1 1 847 5.6E-164 T 26-04-2016 smi_2078 35587f5a366a0e5a5d74cf7e6821bb90 847 PANTHER PTHR38454 1 847 5.6E-164 T 26-04-2016 smi_2078 35587f5a366a0e5a5d74cf7e6821bb90 847 Pfam PF09586 Bacterial membrane protein YfhO 14 828 9.4E-250 T 26-04-2016 IPR018580 Uncharacterised protein family YfhO smi_1555 ac4941c86e0d26366d71a509fa427d02 325 PANTHER PTHR30135 1 325 5.1E-129 T 26-04-2016 smi_1555 ac4941c86e0d26366d71a509fa427d02 325 Hamap MF_00973 Gluconeogenesis factor. 2 323 33.671 T 26-04-2016 IPR010119 Gluconeogenesis factor smi_1555 ac4941c86e0d26366d71a509fa427d02 325 PANTHER PTHR30135:SF3 1 325 5.1E-129 T 26-04-2016 smi_1555 ac4941c86e0d26366d71a509fa427d02 325 SUPERFAMILY SSF142338 3 318 5.89E-94 T 26-04-2016 smi_1555 ac4941c86e0d26366d71a509fa427d02 325 Pfam PF01933 Uncharacterised protein family UPF0052 6 298 1.8E-88 T 26-04-2016 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 smi_1555 ac4941c86e0d26366d71a509fa427d02 325 TIGRFAM TIGR01826 CofD_related: conserved hypothetical protein 6 322 4.9E-122 T 26-04-2016 IPR010119 Gluconeogenesis factor smi_1555 ac4941c86e0d26366d71a509fa427d02 325 Gene3D G3DSA:3.40.50.10680 77 322 1.9E-50 T 26-04-2016 smi_0366 248c5816144aa202773bbc68322d8ccd 449 Pfam PF14501 GHKL domain 339 441 4.7E-13 T 26-04-2016 IPR032834 Sensor histidine kinase NatK, C-terminal domain smi_0366 248c5816144aa202773bbc68322d8ccd 449 PANTHER PTHR40448 1 446 1.8E-118 T 26-04-2016 smi_0366 248c5816144aa202773bbc68322d8ccd 449 PANTHER PTHR40448:SF1 1 446 1.8E-118 T 26-04-2016 smi_0366 248c5816144aa202773bbc68322d8ccd 449 SUPERFAMILY SSF55874 308 424 2.6E-8 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain smi_0366 248c5816144aa202773bbc68322d8ccd 449 Gene3D G3DSA:3.30.565.10 317 423 4.5E-7 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain smi_1542 71d9add0e2d191cc9040b898c6c50050 136 PIRSF PIRSF004749 3 136 2.3E-31 T 26-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 smi_1542 71d9add0e2d191cc9040b898c6c50050 136 Pfam PF01327 Polypeptide deformylase 13 135 1.6E-24 T 26-04-2016 IPR023635 Peptide deformylase smi_1542 71d9add0e2d191cc9040b898c6c50050 136 PRINTS PR01576 Peptide deformylase signature 113 136 5.4E-13 T 26-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 smi_1542 71d9add0e2d191cc9040b898c6c50050 136 PRINTS PR01576 Peptide deformylase signature 30 59 5.4E-13 T 26-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 smi_1542 71d9add0e2d191cc9040b898c6c50050 136 PRINTS PR01576 Peptide deformylase signature 83 94 5.4E-13 T 26-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 smi_1542 71d9add0e2d191cc9040b898c6c50050 136 SUPERFAMILY SSF56420 15 135 2.49E-36 T 26-04-2016 IPR023635 Peptide deformylase smi_1542 71d9add0e2d191cc9040b898c6c50050 136 Gene3D G3DSA:3.90.45.10 11 135 2.1E-34 T 26-04-2016 IPR023635 Peptide deformylase smi_1542 71d9add0e2d191cc9040b898c6c50050 136 PANTHER PTHR10458 26 136 2.0E-24 T 26-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 smi_0845 e81899ccf5c1c2c7aad52b4203eb5ddd 232 SUPERFAMILY SSF51735 3 231 4.03E-58 T 26-04-2016 IPR016040 NAD(P)-binding domain smi_0845 e81899ccf5c1c2c7aad52b4203eb5ddd 232 PANTHER PTHR24321:SF6 1 231 3.0E-34 T 26-04-2016 smi_0845 e81899ccf5c1c2c7aad52b4203eb5ddd 232 PANTHER PTHR24321 1 231 3.0E-34 T 26-04-2016 smi_0845 e81899ccf5c1c2c7aad52b4203eb5ddd 232 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 6.5E-36 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR smi_0845 e81899ccf5c1c2c7aad52b4203eb5ddd 232 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 137 156 6.5E-36 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR smi_0845 e81899ccf5c1c2c7aad52b4203eb5ddd 232 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 175 6.5E-36 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR smi_0845 e81899ccf5c1c2c7aad52b4203eb5ddd 232 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 111 127 6.5E-36 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR smi_0845 e81899ccf5c1c2c7aad52b4203eb5ddd 232 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 193 213 6.5E-36 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR smi_0845 e81899ccf5c1c2c7aad52b4203eb5ddd 232 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 63 74 6.5E-36 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR smi_0845 e81899ccf5c1c2c7aad52b4203eb5ddd 232 Gene3D G3DSA:3.40.50.720 3 231 6.7E-59 T 26-04-2016 IPR016040 NAD(P)-binding domain smi_0845 e81899ccf5c1c2c7aad52b4203eb5ddd 232 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 9 230 1.0E-40 T 26-04-2016 smi_0845 e81899ccf5c1c2c7aad52b4203eb5ddd 232 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 124 152 - T 26-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 smi_0845 e81899ccf5c1c2c7aad52b4203eb5ddd 232 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 117 125 1.8E-10 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR smi_0845 e81899ccf5c1c2c7aad52b4203eb5ddd 232 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 137 156 1.8E-10 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR smi_0845 e81899ccf5c1c2c7aad52b4203eb5ddd 232 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 63 74 1.8E-10 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR smi_1895 6c55b95a041942abe65d5b9b45fbe03a 122 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 122 2.9E-56 T 26-04-2016 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 smi_1895 6c55b95a041942abe65d5b9b45fbe03a 122 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 122 26.242 T 26-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 smi_1895 6c55b95a041942abe65d5b9b45fbe03a 122 SUPERFAMILY SSF50193 1 122 2.09E-49 T 26-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 smi_1895 6c55b95a041942abe65d5b9b45fbe03a 122 Pfam PF00238 Ribosomal protein L14p/L23e 1 122 3.0E-53 T 26-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 smi_1895 6c55b95a041942abe65d5b9b45fbe03a 122 PANTHER PTHR11761 1 122 1.0E-71 T 26-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 smi_1895 6c55b95a041942abe65d5b9b45fbe03a 122 SMART SM01374 1 122 4.6E-84 T 26-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 smi_1895 6c55b95a041942abe65d5b9b45fbe03a 122 Gene3D G3DSA:2.40.150.20 1 122 5.8E-52 T 26-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 smi_1895 6c55b95a041942abe65d5b9b45fbe03a 122 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 26-04-2016 IPR019972 Ribosomal protein L14P, conserved site smi_0134 db0f37af49940c4cbd416d755140ae54 505 SUPERFAMILY SSF51445 3 496 3.04E-173 T 26-04-2016 IPR017853 Glycoside hydrolase superfamily smi_0134 db0f37af49940c4cbd416d755140ae54 505 PANTHER PTHR32438:SF5 2 498 1.8E-172 T 26-04-2016 smi_0134 db0f37af49940c4cbd416d755140ae54 505 PANTHER PTHR32438 2 498 1.8E-172 T 26-04-2016 smi_0134 db0f37af49940c4cbd416d755140ae54 505 TIGRFAM TIGR00217 malQ: 4-alpha-glucanotransferase 2 494 6.7E-112 T 26-04-2016 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 smi_0134 db0f37af49940c4cbd416d755140ae54 505 Gene3D G3DSA:3.20.20.80 2 495 7.5E-187 T 26-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 smi_0134 db0f37af49940c4cbd416d755140ae54 505 Pfam PF02446 4-alpha-glucanotransferase 10 474 3.7E-165 T 26-04-2016 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 smi_0068 b494901a153414cd310827286d3b2610 480 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 11 459 46.015 T 26-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 smi_0068 b494901a153414cd310827286d3b2610 480 PANTHER PTHR11907 9 471 1.7E-233 T 26-04-2016 smi_0068 b494901a153414cd310827286d3b2610 480 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 12 458 4.5E-155 T 26-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 smi_0068 b494901a153414cd310827286d3b2610 480 SUPERFAMILY SSF56235 12 238 2.4E-64 T 26-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal smi_0068 b494901a153414cd310827286d3b2610 480 Gene3D G3DSA:3.60.20.10 11 236 5.4E-63 T 26-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal smi_0068 b494901a153414cd310827286d3b2610 480 Pfam PF00156 Phosphoribosyl transferase domain 272 384 1.1E-10 T 26-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 smi_0068 b494901a153414cd310827286d3b2610 480 PANTHER PTHR11907:SF0 9 471 1.7E-233 T 26-04-2016 smi_0068 b494901a153414cd310827286d3b2610 480 PIRSF PIRSF000485 8 474 2.5E-175 T 26-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 smi_0068 b494901a153414cd310827286d3b2610 480 Gene3D G3DSA:3.40.50.2020 270 435 6.0E-44 T 26-04-2016 IPR029057 Phosphoribosyltransferase-like smi_0068 b494901a153414cd310827286d3b2610 480 SUPERFAMILY SSF53271 248 465 1.57E-74 T 26-04-2016 IPR029057 Phosphoribosyltransferase-like smi_0068 b494901a153414cd310827286d3b2610 480 Pfam PF13522 Glutamine amidotransferase domain 75 206 1.9E-17 T 26-04-2016 smi_1777 0c29d18d04795e5d702fed941e39d50e 471 PANTHER PTHR11076 111 433 6.0E-85 T 26-04-2016 smi_1777 0c29d18d04795e5d702fed941e39d50e 471 PANTHER PTHR11076 13 81 6.0E-85 T 26-04-2016 smi_1777 0c29d18d04795e5d702fed941e39d50e 471 PANTHER PTHR11076:SF31 111 433 6.0E-85 T 26-04-2016 smi_1777 0c29d18d04795e5d702fed941e39d50e 471 PANTHER PTHR11076:SF31 13 81 6.0E-85 T 26-04-2016 smi_1777 0c29d18d04795e5d702fed941e39d50e 471 SUPERFAMILY SSF56672 4 83 3.11E-51 T 26-04-2016 smi_1777 0c29d18d04795e5d702fed941e39d50e 471 SUPERFAMILY SSF56672 116 292 3.11E-51 T 26-04-2016 smi_1777 0c29d18d04795e5d702fed941e39d50e 471 SUPERFAMILY SSF100879 300 399 1.94E-9 T 26-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 smi_1777 0c29d18d04795e5d702fed941e39d50e 471 Gene3D G3DSA:3.30.1490.100 303 405 6.8E-7 T 26-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 smi_1777 0c29d18d04795e5d702fed941e39d50e 471 Gene3D G3DSA:1.10.150.20 221 293 4.9E-25 T 26-04-2016 smi_1777 0c29d18d04795e5d702fed941e39d50e 471 Pfam PF00817 impB/mucB/samB family 17 207 2.2E-16 T 26-04-2016 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 smi_1777 0c29d18d04795e5d702fed941e39d50e 471 Pfam PF11798 IMS family HHH motif 223 255 4.5E-7 T 26-04-2016 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 smi_1777 0c29d18d04795e5d702fed941e39d50e 471 Gene3D G3DSA:3.30.70.270 112 209 2.2E-15 T 26-04-2016 smi_1777 0c29d18d04795e5d702fed941e39d50e 471 Pfam PF11799 impB/mucB/samB family C-terminal domain 296 403 2.9E-12 T 26-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 smi_1931 9d2e193481ad0cf3054bc11ac27399dc 649 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 209 326 6.0E-36 T 26-04-2016 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 smi_1931 9d2e193481ad0cf3054bc11ac27399dc 649 SUPERFAMILY SSF118116 447 635 2.75E-51 T 26-04-2016 smi_1931 9d2e193481ad0cf3054bc11ac27399dc 649 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 25 119 2.1E-10 T 26-04-2016 smi_1931 9d2e193481ad0cf3054bc11ac27399dc 649 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 94 100 - T 26-04-2016 IPR014762 DNA mismatch repair, conserved site smi_1931 9d2e193481ad0cf3054bc11ac27399dc 649 Pfam PF08676 MutL C terminal dimerisation domain 449 592 1.7E-40 T 26-04-2016 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 smi_1931 9d2e193481ad0cf3054bc11ac27399dc 649 Gene3D G3DSA:3.30.565.10 4 203 4.0E-72 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain smi_1931 9d2e193481ad0cf3054bc11ac27399dc 649 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 3 307 3.3E-102 T 26-04-2016 IPR002099 DNA mismatch repair protein family GO:0005524|GO:0006298|GO:0030983 smi_1931 9d2e193481ad0cf3054bc11ac27399dc 649 Gene3D G3DSA:3.30.230.10 204 326 1.5E-36 T 26-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup smi_1931 9d2e193481ad0cf3054bc11ac27399dc 649 SUPERFAMILY SSF55874 3 214 1.44E-51 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain smi_1931 9d2e193481ad0cf3054bc11ac27399dc 649 SMART SM01340 209 327 5.1E-52 T 26-04-2016 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 smi_1931 9d2e193481ad0cf3054bc11ac27399dc 649 SUPERFAMILY SSF54211 191 327 1.4E-35 T 26-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold smi_1931 9d2e193481ad0cf3054bc11ac27399dc 649 SMART SM00853 451 593 3.6E-45 T 26-04-2016 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 smi_1931 9d2e193481ad0cf3054bc11ac27399dc 649 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 2 633 27.894 T 26-04-2016 IPR020667 DNA mismatch repair protein, MutL GO:0006298 smi_1931 9d2e193481ad0cf3054bc11ac27399dc 649 PANTHER PTHR10073 4 649 7.3E-170 T 26-04-2016 smi_0079 8ec0d7244ae5ec0f237c35808d056c56 595 SUPERFAMILY SSF51445 8 331 3.94E-102 T 26-04-2016 IPR017853 Glycoside hydrolase superfamily smi_0079 8ec0d7244ae5ec0f237c35808d056c56 595 PANTHER PTHR23421:SF13 7 590 4.7E-254 T 26-04-2016 smi_0079 8ec0d7244ae5ec0f237c35808d056c56 595 PIRSF PIRSF006336 2 591 2.7E-179 T 26-04-2016 IPR026283 Beta-galactosidase 1-like GO:0004565 smi_0079 8ec0d7244ae5ec0f237c35808d056c56 595 PANTHER PTHR23421 7 590 4.7E-254 T 26-04-2016 IPR001944 Glycoside hydrolase, family 35 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 smi_0079 8ec0d7244ae5ec0f237c35808d056c56 595 Pfam PF01301 Glycosyl hydrolases family 35 10 327 1.3E-119 T 26-04-2016 IPR031330 Glycoside hydrolase 35, catalytic domain KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 smi_0079 8ec0d7244ae5ec0f237c35808d056c56 595 PRINTS PR00742 Glycosyl hydrolase family 35 signature 89 108 7.8E-48 T 26-04-2016 IPR001944 Glycoside hydrolase, family 35 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 smi_0079 8ec0d7244ae5ec0f237c35808d056c56 595 PRINTS PR00742 Glycosyl hydrolase family 35 signature 143 158 7.8E-48 T 26-04-2016 IPR001944 Glycoside hydrolase, family 35 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 smi_0079 8ec0d7244ae5ec0f237c35808d056c56 595 PRINTS PR00742 Glycosyl hydrolase family 35 signature 13 30 7.8E-48 T 26-04-2016 IPR001944 Glycoside hydrolase, family 35 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 smi_0079 8ec0d7244ae5ec0f237c35808d056c56 595 PRINTS PR00742 Glycosyl hydrolase family 35 signature 270 285 7.8E-48 T 26-04-2016 IPR001944 Glycoside hydrolase, family 35 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 smi_0079 8ec0d7244ae5ec0f237c35808d056c56 595 PRINTS PR00742 Glycosyl hydrolase family 35 signature 235 250 7.8E-48 T 26-04-2016 IPR001944 Glycoside hydrolase, family 35 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 smi_0079 8ec0d7244ae5ec0f237c35808d056c56 595 PRINTS PR00742 Glycosyl hydrolase family 35 signature 34 52 7.8E-48 T 26-04-2016 IPR001944 Glycoside hydrolase, family 35 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 smi_0079 8ec0d7244ae5ec0f237c35808d056c56 595 PRINTS PR00742 Glycosyl hydrolase family 35 signature 297 313 7.8E-48 T 26-04-2016 IPR001944 Glycoside hydrolase, family 35 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 smi_0079 8ec0d7244ae5ec0f237c35808d056c56 595 PRINTS PR00742 Glycosyl hydrolase family 35 signature 530 546 7.8E-48 T 26-04-2016 IPR001944 Glycoside hydrolase, family 35 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 smi_0079 8ec0d7244ae5ec0f237c35808d056c56 595 Gene3D G3DSA:3.20.20.80 7 332 2.1E-122 T 26-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 smi_0079 8ec0d7244ae5ec0f237c35808d056c56 595 SUPERFAMILY SSF49785 446 581 3.61E-27 T 26-04-2016 IPR008979 Galactose-binding domain-like smi_0079 8ec0d7244ae5ec0f237c35808d056c56 595 Gene3D G3DSA:2.60.120.260 449 579 7.7E-22 T 26-04-2016 IPR008979 Galactose-binding domain-like smi_0311 3c49670e7253d79cfb7298af950c137f 246 SMART SM00967 29 95 6.5E-13 T 26-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 smi_0311 3c49670e7253d79cfb7298af950c137f 246 PANTHER PTHR12029 1 245 5.1E-66 T 26-04-2016 smi_0311 3c49670e7253d79cfb7298af950c137f 246 SUPERFAMILY SSF55315 3 91 1.29E-20 T 26-04-2016 IPR029064 50S ribosomal protein L30e-like smi_0311 3c49670e7253d79cfb7298af950c137f 246 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 29 92 2.9E-8 T 26-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 smi_0311 3c49670e7253d79cfb7298af950c137f 246 Pfam PF00588 SpoU rRNA Methylase family 105 242 1.2E-34 T 26-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 smi_0311 3c49670e7253d79cfb7298af950c137f 246 SUPERFAMILY SSF75217 101 245 4.58E-39 T 26-04-2016 IPR029028 Alpha/beta knot methyltransferases smi_0311 3c49670e7253d79cfb7298af950c137f 246 Gene3D G3DSA:3.30.1330.30 3 91 7.5E-23 T 26-04-2016 IPR029064 50S ribosomal protein L30e-like smi_0311 3c49670e7253d79cfb7298af950c137f 246 Gene3D G3DSA:3.40.1280.10 104 245 9.6E-47 T 26-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal smi_1395 3943dee6dee3536ba8706ad373cc3b56 678 PANTHER PTHR30075:SF2 1 678 0.0 T 26-04-2016 smi_1395 3943dee6dee3536ba8706ad373cc3b56 678 PANTHER PTHR30075 1 678 0.0 T 26-04-2016 smi_1395 3943dee6dee3536ba8706ad373cc3b56 678 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 5 546 6.8E-194 T 26-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 smi_1395 3943dee6dee3536ba8706ad373cc3b56 678 Gene3D G3DSA:1.10.3210.10 359 463 4.5E-6 T 26-04-2016 IPR006674 HD domain smi_1395 3943dee6dee3536ba8706ad373cc3b56 678 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 2 675 4.1E-213 T 26-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 smi_1395 3943dee6dee3536ba8706ad373cc3b56 678 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 2 675 25.899 T 26-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 smi_1395 3943dee6dee3536ba8706ad373cc3b56 678 SUPERFAMILY SSF109604 334 491 2.2E-21 T 26-04-2016 smi_1395 3943dee6dee3536ba8706ad373cc3b56 678 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 242 257 1.6E-32 T 26-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 smi_1395 3943dee6dee3536ba8706ad373cc3b56 678 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 6 19 1.6E-32 T 26-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 smi_1395 3943dee6dee3536ba8706ad373cc3b56 678 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 314 330 1.6E-32 T 26-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 smi_1395 3943dee6dee3536ba8706ad373cc3b56 678 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 393 412 1.6E-32 T 26-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 smi_1395 3943dee6dee3536ba8706ad373cc3b56 678 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 49 61 1.6E-32 T 26-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 smi_0596 b3e42edc0919bd91ecae0a04faa25089 147 PANTHER PTHR33055 9 140 7.1E-30 T 26-04-2016 smi_0596 b3e42edc0919bd91ecae0a04faa25089 147 Pfam PF02371 Transposase IS116/IS110/IS902 family 16 101 9.4E-22 T 26-04-2016 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 smi_0596 b3e42edc0919bd91ecae0a04faa25089 147 PANTHER PTHR33055:SF3 9 140 7.1E-30 T 26-04-2016 smi_0514 a065f08767accb64556d409468f6dd82 147 Pfam PF01047 MarR family 35 90 1.4E-9 T 26-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 smi_0514 a065f08767accb64556d409468f6dd82 147 SMART SM00347 24 126 7.5E-12 T 26-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 smi_0514 a065f08767accb64556d409468f6dd82 147 SUPERFAMILY SSF46785 31 141 1.4E-22 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain smi_0514 a065f08767accb64556d409468f6dd82 147 PRINTS PR00598 Bacterial regulatory protein MarR family signature 67 82 6.57E-5 T 26-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 smi_0514 a065f08767accb64556d409468f6dd82 147 PRINTS PR00598 Bacterial regulatory protein MarR family signature 50 66 6.57E-5 T 26-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 smi_0514 a065f08767accb64556d409468f6dd82 147 PRINTS PR00598 Bacterial regulatory protein MarR family signature 116 136 6.57E-5 T 26-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 smi_0514 a065f08767accb64556d409468f6dd82 147 PRINTS PR00598 Bacterial regulatory protein MarR family signature 86 102 6.57E-5 T 26-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 smi_0514 a065f08767accb64556d409468f6dd82 147 Gene3D G3DSA:1.10.10.10 2 140 5.3E-28 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain smi_0514 a065f08767accb64556d409468f6dd82 147 PANTHER PTHR33164 38 142 5.8E-13 T 26-04-2016 smi_1877 10db23cc2eab08a7a6c2807ae0774059 119 SUPERFAMILY SSF55021 32 113 3.05E-21 T 26-04-2016 smi_1877 10db23cc2eab08a7a6c2807ae0774059 119 Gene3D G3DSA:3.30.70.260 32 118 1.3E-30 T 26-04-2016 smi_1877 10db23cc2eab08a7a6c2807ae0774059 119 PANTHER PTHR34875 27 119 4.1E-32 T 26-04-2016 smi_1877 10db23cc2eab08a7a6c2807ae0774059 119 Hamap MF_01054 UPF0237 protein . 32 119 23.834 T 26-04-2016 IPR022986 Uncharacterised protein family UPF0237, ACT-type smi_1877 10db23cc2eab08a7a6c2807ae0774059 119 Pfam PF13740 ACT domain 35 106 3.0E-12 T 26-04-2016 smi_0807 03cc7005b746fa91e68aef619606ffea 203 PANTHER PTHR11671:SF2 1 203 1.3E-67 T 26-04-2016 smi_0807 03cc7005b746fa91e68aef619606ffea 203 Hamap MF_00271 V-type ATP synthase subunit D [atpD]. 3 203 19.35 T 26-04-2016 IPR002699 ATPase, V1 complex, subunit D GO:0042626 smi_0807 03cc7005b746fa91e68aef619606ffea 203 TIGRFAM TIGR00309 V_ATPase_subD: V-type ATPase, D subunit 5 203 1.1E-45 T 26-04-2016 IPR002699 ATPase, V1 complex, subunit D GO:0042626 smi_0807 03cc7005b746fa91e68aef619606ffea 203 Pfam PF01813 ATP synthase subunit D 12 203 6.2E-51 T 26-04-2016 IPR002699 ATPase, V1 complex, subunit D GO:0042626 smi_0807 03cc7005b746fa91e68aef619606ffea 203 PANTHER PTHR11671 1 203 1.3E-67 T 26-04-2016 IPR002699 ATPase, V1 complex, subunit D GO:0042626 smi_0852 f8043617fc087c9067d09fe65b143b02 444 PRINTS PR00344 Bacterial sensor protein C-terminal signature 381 391 1.7E-13 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 smi_0852 f8043617fc087c9067d09fe65b143b02 444 PRINTS PR00344 Bacterial sensor protein C-terminal signature 363 377 1.7E-13 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 smi_0852 f8043617fc087c9067d09fe65b143b02 444 PRINTS PR00344 Bacterial sensor protein C-terminal signature 422 435 1.7E-13 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 smi_0852 f8043617fc087c9067d09fe65b143b02 444 PRINTS PR00344 Bacterial sensor protein C-terminal signature 398 416 1.7E-13 T 26-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 smi_0852 f8043617fc087c9067d09fe65b143b02 444 Pfam PF00512 His Kinase A (phospho-acceptor) domain 217 283 2.7E-9 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 smi_0852 f8043617fc087c9067d09fe65b143b02 444 SUPERFAMILY SSF55874 293 436 8.12E-35 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain smi_0852 f8043617fc087c9067d09fe65b143b02 444 SMART SM00388 216 283 1.5E-11 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 smi_0852 f8043617fc087c9067d09fe65b143b02 444 PANTHER PTHR24423 1 8 2.9E-78 T 26-04-2016 smi_0852 f8043617fc087c9067d09fe65b143b02 444 PANTHER PTHR24423 214 441 2.9E-78 T 26-04-2016 smi_0852 f8043617fc087c9067d09fe65b143b02 444 SMART SM00387 326 438 6.2E-34 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain smi_0852 f8043617fc087c9067d09fe65b143b02 444 PANTHER PTHR24423:SF546 1 8 2.9E-78 T 26-04-2016 smi_0852 f8043617fc087c9067d09fe65b143b02 444 PANTHER PTHR24423:SF546 214 441 2.9E-78 T 26-04-2016 smi_0852 f8043617fc087c9067d09fe65b143b02 444 Gene3D G3DSA:1.10.287.130 210 270 4.5E-12 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 smi_0852 f8043617fc087c9067d09fe65b143b02 444 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 327 434 1.1E-21 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain smi_0852 f8043617fc087c9067d09fe65b143b02 444 Gene3D G3DSA:3.30.565.10 271 441 2.5E-36 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain smi_0852 f8043617fc087c9067d09fe65b143b02 444 SUPERFAMILY SSF47384 207 282 2.55E-11 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 smi_0549 d230c11729bda5b9ae4c714a7d41f3a7 162 Pfam PF00583 Acetyltransferase (GNAT) family 68 144 2.3E-12 T 26-04-2016 IPR000182 GNAT domain GO:0008080 smi_0549 d230c11729bda5b9ae4c714a7d41f3a7 162 Gene3D G3DSA:3.40.630.30 12 160 1.5E-26 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase smi_0549 d230c11729bda5b9ae4c714a7d41f3a7 162 PANTHER PTHR23091 54 160 6.5E-13 T 26-04-2016 smi_0549 d230c11729bda5b9ae4c714a7d41f3a7 162 SUPERFAMILY SSF55729 24 148 3.49E-20 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase smi_1968 79725c0e4a4e2e6847296b1400980ca3 398 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 9 17 - T 26-04-2016 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 smi_1968 79725c0e4a4e2e6847296b1400980ca3 398 TIGRFAM TIGR00032 argG: argininosuccinate synthase 5 393 6.6E-165 T 26-04-2016 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 smi_1968 79725c0e4a4e2e6847296b1400980ca3 398 SUPERFAMILY SSF69864 169 396 3.66E-93 T 26-04-2016 smi_1968 79725c0e4a4e2e6847296b1400980ca3 398 PANTHER PTHR11587 1 398 6.5E-221 T 26-04-2016 smi_1968 79725c0e4a4e2e6847296b1400980ca3 398 Pfam PF00764 Arginosuccinate synthase 7 390 6.3E-175 T 26-04-2016 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 smi_1968 79725c0e4a4e2e6847296b1400980ca3 398 Gene3D G3DSA:3.40.50.620 1 171 7.0E-59 T 26-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold smi_1968 79725c0e4a4e2e6847296b1400980ca3 398 SUPERFAMILY SSF52402 3 164 1.41E-45 T 26-04-2016 smi_1968 79725c0e4a4e2e6847296b1400980ca3 398 Hamap MF_00005 Argininosuccinate synthase [argG]. 3 395 54.41 T 26-04-2016 IPR023434 Argininosuccinate synthase, type 1 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 smi_1968 79725c0e4a4e2e6847296b1400980ca3 398 Gene3D G3DSA:3.90.1260.10 172 396 1.7E-92 T 26-04-2016 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 smi_1968 79725c0e4a4e2e6847296b1400980ca3 398 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 115 126 - T 26-04-2016 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 smi_1968 79725c0e4a4e2e6847296b1400980ca3 398 PANTHER PTHR11587:SF2 1 398 6.5E-221 T 26-04-2016 smi_1952 e1de081672759ddfb5d7587f1a3047c3 145 Pfam PF13673 Acetyltransferase (GNAT) domain 33 120 1.3E-9 T 26-04-2016 IPR000182 GNAT domain GO:0008080 smi_1952 e1de081672759ddfb5d7587f1a3047c3 145 SUPERFAMILY SSF55729 15 143 1.89E-22 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase smi_1952 e1de081672759ddfb5d7587f1a3047c3 145 Gene3D G3DSA:3.40.630.30 3 143 6.3E-24 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase smi_1952 e1de081672759ddfb5d7587f1a3047c3 145 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 14 138 9.7E-43 T 26-04-2016 IPR006464 Ribosomal-protein-alanine acetyltransferase GO:0006474|GO:0016407 smi_1952 e1de081672759ddfb5d7587f1a3047c3 145 PANTHER PTHR23091:SF122 1 145 1.6E-30 T 26-04-2016 smi_1952 e1de081672759ddfb5d7587f1a3047c3 145 PANTHER PTHR23091 1 145 1.6E-30 T 26-04-2016 smi_0390 6b82cef30ce074211d8ded207ca13813 387 PANTHER PTHR10629 4 384 1.3E-66 T 26-04-2016 smi_0390 6b82cef30ce074211d8ded207ca13813 387 ProSitePatterns PS00095 C-5 cytosine-specific DNA methylases C-terminal signature. 360 378 - T 26-04-2016 IPR031303 DNA methylase, C-5 cytosine-specific, conserved site KEGG: 00270+2.1.1.37 smi_0390 6b82cef30ce074211d8ded207ca13813 387 Gene3D G3DSA:3.90.120.10 307 366 3.2E-5 T 26-04-2016 smi_0390 6b82cef30ce074211d8ded207ca13813 387 Pfam PF00145 C-5 cytosine-specific DNA methylase 3 379 1.9E-67 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase smi_0390 6b82cef30ce074211d8ded207ca13813 387 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 3 19 6.3E-19 T 26-04-2016 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 smi_0390 6b82cef30ce074211d8ded207ca13813 387 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 119 133 6.3E-19 T 26-04-2016 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 smi_0390 6b82cef30ce074211d8ded207ca13813 387 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 175 188 6.3E-19 T 26-04-2016 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 smi_0390 6b82cef30ce074211d8ded207ca13813 387 Gene3D G3DSA:3.40.50.150 1 234 1.4E-60 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase smi_0390 6b82cef30ce074211d8ded207ca13813 387 SUPERFAMILY SSF53335 2 379 1.56E-86 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase smi_0390 6b82cef30ce074211d8ded207ca13813 387 ProSitePatterns PS00094 C-5 cytosine-specific DNA methylases active site. 82 94 - T 26-04-2016 IPR018117 DNA methylase, C-5 cytosine-specific, active site KEGG: 00270+2.1.1.37 smi_0390 6b82cef30ce074211d8ded207ca13813 387 TIGRFAM TIGR00675 dcm: DNA (cytosine-5-)-methyltransferase 4 377 3.7E-61 T 26-04-2016 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 smi_0801 136c163650cf6be181c4415351257441 158 PANTHER PTHR10263:SF5 15 131 2.9E-15 T 26-04-2016 smi_0801 136c163650cf6be181c4415351257441 158 Gene3D G3DSA:1.20.120.610 12 156 9.9E-34 T 26-04-2016 smi_0801 136c163650cf6be181c4415351257441 158 PANTHER PTHR10263 15 131 2.9E-15 T 26-04-2016 smi_0801 136c163650cf6be181c4415351257441 158 SUPERFAMILY SSF81333 90 156 6.67E-9 T 26-04-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 smi_0801 136c163650cf6be181c4415351257441 158 Pfam PF00137 ATP synthase subunit C 19 78 1.6E-14 T 26-04-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 smi_0801 136c163650cf6be181c4415351257441 158 Pfam PF00137 ATP synthase subunit C 97 154 7.9E-13 T 26-04-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 smi_0801 136c163650cf6be181c4415351257441 158 PRINTS PR00122 Vacuolar ATP synthase 16kDa subunit signature 133 156 7.9E-9 T 26-04-2016 IPR000245 V-ATPase proteolipid subunit GO:0015078|GO:0015991|GO:0033179 smi_0801 136c163650cf6be181c4415351257441 158 PRINTS PR00122 Vacuolar ATP synthase 16kDa subunit signature 32 56 7.9E-9 T 26-04-2016 IPR000245 V-ATPase proteolipid subunit GO:0015078|GO:0015991|GO:0033179 smi_0801 136c163650cf6be181c4415351257441 158 PRINTS PR00122 Vacuolar ATP synthase 16kDa subunit signature 106 132 7.9E-9 T 26-04-2016 IPR000245 V-ATPase proteolipid subunit GO:0015078|GO:0015991|GO:0033179 smi_0801 136c163650cf6be181c4415351257441 158 PRINTS PR00122 Vacuolar ATP synthase 16kDa subunit signature 58 82 7.9E-9 T 26-04-2016 IPR000245 V-ATPase proteolipid subunit GO:0015078|GO:0015991|GO:0033179 smi_0801 136c163650cf6be181c4415351257441 158 SUPERFAMILY SSF81333 15 80 8.24E-10 T 26-04-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 smi_1832 e609f8bf524984a914ffe221b24f684f 148 SMART SM00850 48 145 3.8E-25 T 26-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 smi_1832 e609f8bf524984a914ffe221b24f684f 148 Gene3D G3DSA:2.40.50.40 41 106 2.1E-15 T 26-04-2016 smi_1832 e609f8bf524984a914ffe221b24f684f 148 PANTHER PTHR37299 1 148 5.1E-43 T 26-04-2016 smi_1832 e609f8bf524984a914ffe221b24f684f 148 Pfam PF04397 LytTr DNA-binding domain 51 144 1.4E-22 T 26-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 smi_1175 26a1d0d2aeab9c5d09033b9c7573820e 269 PANTHER PTHR13754:SF15 1 267 6.8E-110 T 26-04-2016 smi_1175 26a1d0d2aeab9c5d09033b9c7573820e 269 SUPERFAMILY SSF56281 12 242 4.46E-43 T 26-04-2016 IPR001279 Metallo-beta-lactamase smi_1175 26a1d0d2aeab9c5d09033b9c7573820e 269 SMART SM00849 16 196 1.5E-11 T 26-04-2016 IPR001279 Metallo-beta-lactamase smi_1175 26a1d0d2aeab9c5d09033b9c7573820e 269 Gene3D G3DSA:3.60.15.10 6 236 3.9E-39 T 26-04-2016 IPR001279 Metallo-beta-lactamase smi_1175 26a1d0d2aeab9c5d09033b9c7573820e 269 Pfam PF00753 Metallo-beta-lactamase superfamily 15 223 2.1E-22 T 26-04-2016 IPR001279 Metallo-beta-lactamase smi_1175 26a1d0d2aeab9c5d09033b9c7573820e 269 PANTHER PTHR13754 1 267 6.8E-110 T 26-04-2016 smi_1336 a33b38212a5756aff0716c0a8b9bdce1 117 SMART SM00530 16 71 2.2E-10 T 26-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 smi_1336 a33b38212a5756aff0716c0a8b9bdce1 117 Pfam PF01381 Helix-turn-helix 17 71 4.2E-12 T 26-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 smi_1336 a33b38212a5756aff0716c0a8b9bdce1 117 SUPERFAMILY SSF47413 10 76 2.39E-14 T 26-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 smi_1336 a33b38212a5756aff0716c0a8b9bdce1 117 Gene3D G3DSA:1.10.260.40 13 105 1.5E-16 T 26-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 smi_1845 cf9e5010175ff7ac03a8aca9049a466b 140 PANTHER PTHR11349 1 137 4.2E-65 T 26-04-2016 smi_1845 cf9e5010175ff7ac03a8aca9049a466b 140 Gene3D G3DSA:3.30.70.141 1 138 1.0E-53 T 26-04-2016 smi_1845 cf9e5010175ff7ac03a8aca9049a466b 140 SMART SM00562 1 140 6.4E-58 T 26-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 smi_1845 cf9e5010175ff7ac03a8aca9049a466b 140 ProSitePatterns PS00469 Nucleoside diphosphate kinases active site. 118 126 - T 26-04-2016 IPR023005 Nucleoside diphosphate kinase, active site KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 smi_1845 cf9e5010175ff7ac03a8aca9049a466b 140 PRINTS PR01243 Nucleoside diphosphate kinase signature 69 86 1.6E-31 T 26-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 smi_1845 cf9e5010175ff7ac03a8aca9049a466b 140 PRINTS PR01243 Nucleoside diphosphate kinase signature 4 26 1.6E-31 T 26-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 smi_1845 cf9e5010175ff7ac03a8aca9049a466b 140 PRINTS PR01243 Nucleoside diphosphate kinase signature 49 68 1.6E-31 T 26-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 smi_1845 cf9e5010175ff7ac03a8aca9049a466b 140 PRINTS PR01243 Nucleoside diphosphate kinase signature 118 137 1.6E-31 T 26-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 smi_1845 cf9e5010175ff7ac03a8aca9049a466b 140 SUPERFAMILY SSF54919 1 138 5.76E-50 T 26-04-2016 smi_1845 cf9e5010175ff7ac03a8aca9049a466b 140 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 1 139 29.877 T 26-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 smi_1845 cf9e5010175ff7ac03a8aca9049a466b 140 Pfam PF00334 Nucleoside diphosphate kinase 2 138 2.4E-47 T 26-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 smi_0150 501be27832eead28abfbac185a07534c 563 SUPERFAMILY SSF47323 444 563 3.14E-34 T 26-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 smi_0150 501be27832eead28abfbac185a07534c 563 Hamap MF_00123 Arginine--tRNA ligase [argS]. 5 563 28.575 T 26-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 smi_0150 501be27832eead28abfbac185a07534c 563 Gene3D G3DSA:1.10.730.10 444 563 9.3E-38 T 26-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 smi_0150 501be27832eead28abfbac185a07534c 563 Gene3D G3DSA:3.40.50.620 107 443 6.5E-118 T 26-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold smi_0150 501be27832eead28abfbac185a07534c 563 Pfam PF00750 tRNA synthetases class I (R) 93 435 1.7E-102 T 26-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 smi_0150 501be27832eead28abfbac185a07534c 563 SUPERFAMILY SSF55190 1 103 6.02E-26 T 26-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 smi_0150 501be27832eead28abfbac185a07534c 563 SUPERFAMILY SSF52374 107 444 7.6E-102 T 26-04-2016 smi_0150 501be27832eead28abfbac185a07534c 563 PANTHER PTHR11956:SF1 1 563 3.7E-249 T 26-04-2016 smi_0150 501be27832eead28abfbac185a07534c 563 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 3 83 3.6E-17 T 26-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 smi_0150 501be27832eead28abfbac185a07534c 563 PRINTS PR01038 Arginyl-tRNA synthetase signature 297 318 2.0E-21 T 26-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 smi_0150 501be27832eead28abfbac185a07534c 563 PRINTS PR01038 Arginyl-tRNA synthetase signature 113 128 2.0E-21 T 26-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 smi_0150 501be27832eead28abfbac185a07534c 563 PRINTS PR01038 Arginyl-tRNA synthetase signature 128 144 2.0E-21 T 26-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 smi_0150 501be27832eead28abfbac185a07534c 563 PRINTS PR01038 Arginyl-tRNA synthetase signature 152 165 2.0E-21 T 26-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 smi_0150 501be27832eead28abfbac185a07534c 563 Gene3D G3DSA:3.30.1360.70 3 100 3.7E-30 T 26-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 smi_0150 501be27832eead28abfbac185a07534c 563 Pfam PF05746 DALR anticodon binding domain 450 563 3.0E-33 T 26-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 smi_0150 501be27832eead28abfbac185a07534c 563 SMART SM01016 5 83 7.2E-25 T 26-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 smi_0150 501be27832eead28abfbac185a07534c 563 PANTHER PTHR11956 1 563 3.7E-249 T 26-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 smi_0150 501be27832eead28abfbac185a07534c 563 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 6 563 6.0E-163 T 26-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 smi_0150 501be27832eead28abfbac185a07534c 563 SMART SM00836 450 563 1.9E-43 T 26-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 smi_1060 a24b6b6bedffad61fdba8b42ad0023fa 145 Pfam PF08877 MepB protein 19 141 1.4E-41 T 26-04-2016 IPR011235 MepB-like smi_1060 a24b6b6bedffad61fdba8b42ad0023fa 145 PANTHER PTHR41289 15 143 9.2E-26 T 26-04-2016 smi_1060 a24b6b6bedffad61fdba8b42ad0023fa 145 PIRSF PIRSF032285 6 145 1.2E-50 T 26-04-2016 IPR011235 MepB-like smi_0653 9b01b0a671398ce104499c64b99fc07d 647 Pfam PF03129 Anticodon binding domain 547 636 1.8E-25 T 26-04-2016 IPR004154 Anticodon-binding smi_0653 9b01b0a671398ce104499c64b99fc07d 647 Gene3D G3DSA:3.30.930.10 241 536 3.5E-108 T 26-04-2016 smi_0653 9b01b0a671398ce104499c64b99fc07d 647 Gene3D G3DSA:3.10.20.30 1 64 1.2E-24 T 26-04-2016 IPR012675 Beta-grasp domain smi_0653 9b01b0a671398ce104499c64b99fc07d 647 SUPERFAMILY SSF81271 2 61 2.01E-16 T 26-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 smi_0653 9b01b0a671398ce104499c64b99fc07d 647 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 72 637 1.6E-229 T 26-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 smi_0653 9b01b0a671398ce104499c64b99fc07d 647 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 66 641 34.499 T 26-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 smi_0653 9b01b0a671398ce104499c64b99fc07d 647 SUPERFAMILY SSF55681 242 532 1.2E-96 T 26-04-2016 smi_0653 9b01b0a671398ce104499c64b99fc07d 647 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 169 218 1.5E-15 T 26-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 smi_0653 9b01b0a671398ce104499c64b99fc07d 647 SMART SM00863 169 218 4.7E-23 T 26-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 smi_0653 9b01b0a671398ce104499c64b99fc07d 647 Gene3D G3DSA:3.40.50.800 537 642 1.0E-36 T 26-04-2016 IPR004154 Anticodon-binding smi_0653 9b01b0a671398ce104499c64b99fc07d 647 PANTHER PTHR11451 1 644 0.0 T 26-04-2016 smi_0653 9b01b0a671398ce104499c64b99fc07d 647 PANTHER PTHR11451:SF5 1 644 0.0 T 26-04-2016 smi_0653 9b01b0a671398ce104499c64b99fc07d 647 SUPERFAMILY SSF52954 533 639 4.08E-34 T 26-04-2016 IPR004154 Anticodon-binding smi_0653 9b01b0a671398ce104499c64b99fc07d 647 Pfam PF02824 TGS domain 2 61 1.1E-10 T 26-04-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 smi_0653 9b01b0a671398ce104499c64b99fc07d 647 PRINTS PR01047 Threonyl-tRNA synthetase signature 331 359 3.4E-46 T 26-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 smi_0653 9b01b0a671398ce104499c64b99fc07d 647 PRINTS PR01047 Threonyl-tRNA synthetase signature 364 387 3.4E-46 T 26-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 smi_0653 9b01b0a671398ce104499c64b99fc07d 647 PRINTS PR01047 Threonyl-tRNA synthetase signature 513 526 3.4E-46 T 26-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 smi_0653 9b01b0a671398ce104499c64b99fc07d 647 PRINTS PR01047 Threonyl-tRNA synthetase signature 540 552 3.4E-46 T 26-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 smi_0653 9b01b0a671398ce104499c64b99fc07d 647 PRINTS PR01047 Threonyl-tRNA synthetase signature 470 498 3.4E-46 T 26-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 smi_0653 9b01b0a671398ce104499c64b99fc07d 647 Gene3D G3DSA:3.30.980.10 187 222 3.6E-37 T 26-04-2016 smi_0653 9b01b0a671398ce104499c64b99fc07d 647 Gene3D G3DSA:3.30.980.10 66 130 3.6E-37 T 26-04-2016 smi_0653 9b01b0a671398ce104499c64b99fc07d 647 Gene3D G3DSA:3.30.54.20 131 186 1.3E-22 T 26-04-2016 smi_0653 9b01b0a671398ce104499c64b99fc07d 647 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 326 535 3.1E-35 T 26-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 smi_0653 9b01b0a671398ce104499c64b99fc07d 647 SUPERFAMILY SSF55186 63 240 2.75E-63 T 26-04-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 smi_0615 4691edac7ef1cf72cb38e47427da752a 347 Gene3D G3DSA:3.40.50.20 1 115 5.3E-31 T 26-04-2016 IPR016185 Pre-ATP-grasp domain smi_0615 4691edac7ef1cf72cb38e47427da752a 347 PANTHER PTHR23132:SF8 1 344 2.4E-164 T 26-04-2016 smi_0615 4691edac7ef1cf72cb38e47427da752a 347 SUPERFAMILY SSF56059 126 340 1.23E-58 T 26-04-2016 smi_0615 4691edac7ef1cf72cb38e47427da752a 347 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 3 336 38.718 T 26-04-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 smi_0615 4691edac7ef1cf72cb38e47427da752a 347 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 278 306 - T 26-04-2016 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 smi_0615 4691edac7ef1cf72cb38e47427da752a 347 Pfam PF07478 D-ala D-ala ligase C-terminus 134 333 5.0E-72 T 26-04-2016 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 smi_0615 4691edac7ef1cf72cb38e47427da752a 347 Gene3D G3DSA:3.30.470.20 207 335 1.2E-47 T 26-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 smi_0615 4691edac7ef1cf72cb38e47427da752a 347 Gene3D G3DSA:3.30.470.20 116 133 1.2E-47 T 26-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 smi_0615 4691edac7ef1cf72cb38e47427da752a 347 Pfam PF01820 D-ala D-ala ligase N-terminus 5 116 1.0E-26 T 26-04-2016 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 smi_0615 4691edac7ef1cf72cb38e47427da752a 347 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 93 104 - T 26-04-2016 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 smi_0615 4691edac7ef1cf72cb38e47427da752a 347 SUPERFAMILY SSF52440 1 125 4.12E-32 T 26-04-2016 IPR016185 Pre-ATP-grasp domain smi_0615 4691edac7ef1cf72cb38e47427da752a 347 PANTHER PTHR23132 1 344 2.4E-164 T 26-04-2016 smi_0615 4691edac7ef1cf72cb38e47427da752a 347 Gene3D G3DSA:3.30.1490.20 143 206 8.3E-26 T 26-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 smi_0615 4691edac7ef1cf72cb38e47427da752a 347 PIRSF PIRSF039102 1 344 1.4E-100 T 26-04-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 smi_0615 4691edac7ef1cf72cb38e47427da752a 347 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 5 335 1.4E-100 T 26-04-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 smi_1615 bf07e3bb00668e32a67d7238a5351894 628 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 19 36 - T 26-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 smi_1615 bf07e3bb00668e32a67d7238a5351894 628 PANTHER PTHR30175 1 577 0.0 T 26-04-2016 smi_1615 bf07e3bb00668e32a67d7238a5351894 628 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 544 556 - T 26-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- smi_1615 bf07e3bb00668e32a67d7238a5351894 628 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 482 602 1.8E-43 T 26-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- smi_1615 bf07e3bb00668e32a67d7238a5351894 628 Pfam PF00367 phosphotransferase system, EIIB 8 41 5.0E-15 T 26-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 smi_1615 bf07e3bb00668e32a67d7238a5351894 628 Pfam PF02378 Phosphotransferase system, EIIC 109 391 8.0E-34 T 26-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 smi_1615 bf07e3bb00668e32a67d7238a5351894 628 SUPERFAMILY SSF51261 477 625 5.49E-52 T 26-04-2016 IPR011055 Duplicated hybrid motif smi_1615 bf07e3bb00668e32a67d7238a5351894 628 Gene3D G3DSA:2.70.70.10 478 627 2.3E-59 T 26-04-2016 smi_1615 bf07e3bb00668e32a67d7238a5351894 628 SUPERFAMILY SSF55604 5 79 8.89E-21 T 26-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 smi_1615 bf07e3bb00668e32a67d7238a5351894 628 TIGRFAM TIGR01996 PTS-II-BC-sucr: PTS system, sucrose-specific IIBC component 2 447 4.6E-169 T 26-04-2016 IPR010973 Phosphotransferase system, sucrose-specific IIBC component GO:0008982|GO:0009401|GO:0016021 smi_1615 bf07e3bb00668e32a67d7238a5351894 628 Gene3D G3DSA:3.30.1360.60 1 80 4.0E-27 T 26-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 smi_1615 bf07e3bb00668e32a67d7238a5351894 628 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 481 605 7.5E-48 T 26-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- smi_1615 bf07e3bb00668e32a67d7238a5351894 628 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 35 108 9.5E-13 T 26-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 smi_1615 bf07e3bb00668e32a67d7238a5351894 628 PANTHER PTHR30175:SF7 1 577 0.0 T 26-04-2016 smi_0338 e960d6c3fd290a92bcbbc273cb91b0a1 189 Pfam PF04079 Segregation and condensation complex subunit ScpB 5 165 2.5E-54 T 26-04-2016 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 smi_0338 e960d6c3fd290a92bcbbc273cb91b0a1 189 SUPERFAMILY SSF46785 83 157 7.39E-25 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain smi_0338 e960d6c3fd290a92bcbbc273cb91b0a1 189 SUPERFAMILY SSF46785 3 78 6.0E-15 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain smi_0338 e960d6c3fd290a92bcbbc273cb91b0a1 189 PIRSF PIRSF019345 1 189 1.4E-50 T 26-04-2016 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 smi_0338 e960d6c3fd290a92bcbbc273cb91b0a1 189 Gene3D G3DSA:1.10.10.10 84 157 1.4E-33 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain smi_0338 e960d6c3fd290a92bcbbc273cb91b0a1 189 Gene3D G3DSA:1.10.10.10 5 78 5.2E-18 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain smi_0338 e960d6c3fd290a92bcbbc273cb91b0a1 189 PANTHER PTHR34298 1 188 9.3E-55 T 26-04-2016 smi_0338 e960d6c3fd290a92bcbbc273cb91b0a1 189 TIGRFAM TIGR00281 TIGR00281: segregation and condensation protein B 5 173 6.0E-43 T 26-04-2016 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 smi_0338 e960d6c3fd290a92bcbbc273cb91b0a1 189 Hamap MF_01804 Segregation and condensation protein B [scpB]. 1 179 33.863 T 26-04-2016 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 smi_0777 acaa8e026e405a164fd459a277b7351f 582 Pfam PF00005 ABC transporter 359 507 4.0E-31 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 smi_0777 acaa8e026e405a164fd459a277b7351f 582 PANTHER PTHR24221:SF271 1 576 0.0 T 26-04-2016 smi_0777 acaa8e026e405a164fd459a277b7351f 582 SUPERFAMILY SSF90123 11 321 7.85E-66 T 26-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 smi_0777 acaa8e026e405a164fd459a277b7351f 582 ProSitePatterns PS00211 ABC transporters family signature. 479 493 - T 26-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 smi_0777 acaa8e026e405a164fd459a277b7351f 582 SUPERFAMILY SSF52540 334 575 1.44E-84 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0777 acaa8e026e405a164fd459a277b7351f 582 SMART SM00382 367 560 9.3E-14 T 26-04-2016 IPR003593 AAA+ ATPase domain smi_0777 acaa8e026e405a164fd459a277b7351f 582 Gene3D G3DSA:1.20.1560.10 18 321 1.3E-66 T 26-04-2016 smi_0777 acaa8e026e405a164fd459a277b7351f 582 Pfam PF00664 ABC transporter transmembrane region 24 295 5.7E-41 T 26-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 smi_0777 acaa8e026e405a164fd459a277b7351f 582 PANTHER PTHR24221 1 576 0.0 T 26-04-2016 smi_0777 acaa8e026e405a164fd459a277b7351f 582 Gene3D G3DSA:3.40.50.300 341 573 5.4E-74 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1291 b8b12200f9371e6a2c5f1d111e44d118 459 Pfam PF00483 Nucleotidyl transferase 5 219 6.4E-19 T 26-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 smi_1291 b8b12200f9371e6a2c5f1d111e44d118 459 SUPERFAMILY SSF51161 218 438 1.05E-46 T 26-04-2016 IPR011004 Trimeric LpxA-like smi_1291 b8b12200f9371e6a2c5f1d111e44d118 459 SUPERFAMILY SSF53448 4 252 4.83E-65 T 26-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases smi_1291 b8b12200f9371e6a2c5f1d111e44d118 459 Gene3D G3DSA:3.90.550.10 1 244 6.9E-80 T 26-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases smi_1291 b8b12200f9371e6a2c5f1d111e44d118 459 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 5 450 1.8E-172 T 26-04-2016 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00113|UniPathway: UPA00113|UniPathway: UPA00973 smi_1291 b8b12200f9371e6a2c5f1d111e44d118 459 Gene3D G3DSA:2.160.10.10 245 333 2.3E-16 T 26-04-2016 smi_1291 b8b12200f9371e6a2c5f1d111e44d118 459 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 402 430 - T 26-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 smi_1291 b8b12200f9371e6a2c5f1d111e44d118 459 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 2 451 41.155 T 26-04-2016 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00113|UniPathway: UPA00113|UniPathway: UPA00973 smi_1291 b8b12200f9371e6a2c5f1d111e44d118 459 PANTHER PTHR22572:SF115 4 448 3.6E-217 T 26-04-2016 smi_1291 b8b12200f9371e6a2c5f1d111e44d118 459 Gene3D G3DSA:2.160.10.10 334 448 4.2E-35 T 26-04-2016 smi_1291 b8b12200f9371e6a2c5f1d111e44d118 459 PANTHER PTHR22572 4 448 3.6E-217 T 26-04-2016 smi_1291 b8b12200f9371e6a2c5f1d111e44d118 459 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 394 428 1.2E-10 T 26-04-2016 IPR001451 Hexapeptide repeat smi_2058 e56e43c7b2ef9658c924d42a7839b564 432 Gene3D G3DSA:3.40.50.300 289 428 3.9E-19 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_2058 e56e43c7b2ef9658c924d42a7839b564 432 SUPERFAMILY SSF52540 108 408 2.33E-31 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_2058 e56e43c7b2ef9658c924d42a7839b564 432 Gene3D G3DSA:3.40.50.300 89 260 4.9E-20 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_2058 e56e43c7b2ef9658c924d42a7839b564 432 SMART SM00487 91 277 1.9E-9 T 26-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain smi_2058 e56e43c7b2ef9658c924d42a7839b564 432 Pfam PF00271 Helicase conserved C-terminal domain 292 397 4.2E-13 T 26-04-2016 IPR001650 Helicase, C-terminal smi_2058 e56e43c7b2ef9658c924d42a7839b564 432 SMART SM00490 315 398 9.5E-13 T 26-04-2016 IPR001650 Helicase, C-terminal smi_2058 e56e43c7b2ef9658c924d42a7839b564 432 Pfam PF04851 Type III restriction enzyme, res subunit 94 238 3.0E-6 T 26-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 smi_1577 d0c62c60d48a86c83dfde54ccf64afba 466 Gene3D G3DSA:3.30.70.360 207 283 5.1E-31 T 26-04-2016 IPR011650 Peptidase M20, dimerisation domain smi_1577 d0c62c60d48a86c83dfde54ccf64afba 466 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 83 92 - T 26-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 smi_1577 d0c62c60d48a86c83dfde54ccf64afba 466 Gene3D G3DSA:3.30.70.360 284 379 3.7E-36 T 26-04-2016 IPR011650 Peptidase M20, dimerisation domain smi_1577 d0c62c60d48a86c83dfde54ccf64afba 466 Pfam PF01546 Peptidase family M20/M25/M40 87 462 1.6E-31 T 26-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 smi_1577 d0c62c60d48a86c83dfde54ccf64afba 466 TIGRFAM TIGR01886 dipeptidase: dipeptidase PepV 3 466 5.5E-222 T 26-04-2016 IPR011291 Peptidase M20A, peptidase V KEGG: 00480+3.4.13.- smi_1577 d0c62c60d48a86c83dfde54ccf64afba 466 SUPERFAMILY SSF55031 189 368 8.67E-50 T 26-04-2016 IPR011650 Peptidase M20, dimerisation domain smi_1577 d0c62c60d48a86c83dfde54ccf64afba 466 Gene3D G3DSA:3.40.630.10 5 189 2.9E-67 T 26-04-2016 smi_1577 d0c62c60d48a86c83dfde54ccf64afba 466 Gene3D G3DSA:3.40.630.10 382 465 2.9E-67 T 26-04-2016 smi_1577 d0c62c60d48a86c83dfde54ccf64afba 466 PANTHER PTHR11014 259 466 4.5E-62 T 26-04-2016 smi_1577 d0c62c60d48a86c83dfde54ccf64afba 466 PANTHER PTHR11014 4 193 4.5E-62 T 26-04-2016 smi_1577 d0c62c60d48a86c83dfde54ccf64afba 466 SUPERFAMILY SSF53187 4 189 3.43E-67 T 26-04-2016 smi_1577 d0c62c60d48a86c83dfde54ccf64afba 466 SUPERFAMILY SSF53187 383 465 3.43E-67 T 26-04-2016 smi_1577 d0c62c60d48a86c83dfde54ccf64afba 466 TIGRFAM TIGR01887 dipeptidaselike: putative dipeptidase 14 461 4.2E-174 T 26-04-2016 IPR010964 Peptidase M20A, peptidase V-related GO:0008270|GO:0016805 KEGG: 00480+3.4.13.- smi_0258 17baf9a12655bd0fe2b021a25b07a7c3 365 Pfam PF07730 Histidine kinase 175 242 9.1E-16 T 26-04-2016 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 smi_0258 17baf9a12655bd0fe2b021a25b07a7c3 365 Gene3D G3DSA:3.30.565.10 246 324 3.0E-7 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain smi_0258 17baf9a12655bd0fe2b021a25b07a7c3 365 PANTHER PTHR24421:SF10 10 365 8.7E-85 T 26-04-2016 smi_0258 17baf9a12655bd0fe2b021a25b07a7c3 365 PANTHER PTHR24421 10 365 8.7E-85 T 26-04-2016 smi_0258 17baf9a12655bd0fe2b021a25b07a7c3 365 SUPERFAMILY SSF55874 246 360 3.14E-10 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain smi_0764 f2b5722eb523c6e769b506cf59115790 158 Gene3D G3DSA:3.40.50.300 4 157 2.0E-46 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0764 f2b5722eb523c6e769b506cf59115790 158 Pfam PF01202 Shikimate kinase 9 157 3.5E-43 T 26-04-2016 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 smi_0764 f2b5722eb523c6e769b506cf59115790 158 PANTHER PTHR21087:SF0 4 157 3.2E-49 T 26-04-2016 smi_0764 f2b5722eb523c6e769b506cf59115790 158 ProSitePatterns PS01128 Shikimate kinase signature. 52 76 - T 26-04-2016 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 smi_0764 f2b5722eb523c6e769b506cf59115790 158 Hamap MF_00109 Shikimate kinase [aroK]. 1 158 23.978 T 26-04-2016 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 smi_0764 f2b5722eb523c6e769b506cf59115790 158 PRINTS PR01100 Shikimate kinase family signature 51 59 7.4E-21 T 26-04-2016 smi_0764 f2b5722eb523c6e769b506cf59115790 158 PRINTS PR01100 Shikimate kinase family signature 3 18 7.4E-21 T 26-04-2016 smi_0764 f2b5722eb523c6e769b506cf59115790 158 PRINTS PR01100 Shikimate kinase family signature 23 36 7.4E-21 T 26-04-2016 smi_0764 f2b5722eb523c6e769b506cf59115790 158 PRINTS PR01100 Shikimate kinase family signature 89 106 7.4E-21 T 26-04-2016 smi_0764 f2b5722eb523c6e769b506cf59115790 158 PRINTS PR01100 Shikimate kinase family signature 68 77 7.4E-21 T 26-04-2016 smi_0764 f2b5722eb523c6e769b506cf59115790 158 PANTHER PTHR21087 4 157 3.2E-49 T 26-04-2016 smi_0764 f2b5722eb523c6e769b506cf59115790 158 SUPERFAMILY SSF52540 4 157 4.13E-23 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1800 278158293ed6ec006c352d1231614224 297 SMART SM00382 26 213 2.2E-14 T 26-04-2016 IPR003593 AAA+ ATPase domain smi_1800 278158293ed6ec006c352d1231614224 297 Pfam PF13732 Domain of unknown function (DUF4162) 210 289 1.1E-14 T 26-04-2016 IPR025302 Domain of unknown function DUF4162 smi_1800 278158293ed6ec006c352d1231614224 297 Gene3D G3DSA:3.40.50.300 1 223 9.7E-62 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1800 278158293ed6ec006c352d1231614224 297 Pfam PF00005 ABC transporter 19 156 5.7E-27 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 smi_1800 278158293ed6ec006c352d1231614224 297 SUPERFAMILY SSF52540 1 223 2.88E-55 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1800 278158293ed6ec006c352d1231614224 297 ProSitePatterns PS00211 ABC transporters family signature. 129 143 - T 26-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 smi_1800 278158293ed6ec006c352d1231614224 297 PANTHER PTHR24220 3 229 1.2E-139 T 26-04-2016 smi_1800 278158293ed6ec006c352d1231614224 297 PANTHER PTHR24220:SF450 3 229 1.2E-139 T 26-04-2016 smi_0518 5a276fafa10a79a092faa51afa24efed 296 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 5 274 3.6E-51 T 26-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 smi_0518 5a276fafa10a79a092faa51afa24efed 296 PANTHER PTHR11562:SF17 4 283 2.3E-68 T 26-04-2016 smi_0518 5a276fafa10a79a092faa51afa24efed 296 PANTHER PTHR11562 4 283 2.3E-68 T 26-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 smi_0518 5a276fafa10a79a092faa51afa24efed 296 SUPERFAMILY SSF161111 3 197 1.44E-41 T 26-04-2016 smi_0518 5a276fafa10a79a092faa51afa24efed 296 Gene3D G3DSA:1.20.1510.10 5 195 2.7E-43 T 26-04-2016 IPR027469 Cation efflux protein transmembrane domain smi_0518 5a276fafa10a79a092faa51afa24efed 296 Pfam PF01545 Cation efflux family 8 195 2.6E-38 T 26-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 smi_0735 f049f3b45c48d57ae67dfa8f2bc2b7f2 267 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 21 267 1.8E-118 T 26-04-2016 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 smi_0735 f049f3b45c48d57ae67dfa8f2bc2b7f2 267 ProSitePatterns PS00211 ABC transporters family signature. 164 178 - T 26-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 smi_0735 f049f3b45c48d57ae67dfa8f2bc2b7f2 267 SMART SM00382 45 239 9.4E-10 T 26-04-2016 IPR003593 AAA+ ATPase domain smi_0735 f049f3b45c48d57ae67dfa8f2bc2b7f2 267 Gene3D G3DSA:3.40.50.300 16 258 5.3E-62 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0735 f049f3b45c48d57ae67dfa8f2bc2b7f2 267 PANTHER PTHR24220:SF506 22 265 1.2E-137 T 26-04-2016 smi_0735 f049f3b45c48d57ae67dfa8f2bc2b7f2 267 Pfam PF00005 ABC transporter 37 191 1.3E-28 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 smi_0735 f049f3b45c48d57ae67dfa8f2bc2b7f2 267 SUPERFAMILY SSF52540 17 254 3.66E-55 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0735 f049f3b45c48d57ae67dfa8f2bc2b7f2 267 PANTHER PTHR24220 22 265 1.2E-137 T 26-04-2016 smi_0291 7208cec5b42da471b9dc21bdc70371f7 654 Gene3D G3DSA:3.90.76.10 42 222 1.4E-40 T 26-04-2016 smi_0291 7208cec5b42da471b9dc21bdc70371f7 654 PANTHER PTHR30290 330 629 1.3E-116 T 26-04-2016 smi_0291 7208cec5b42da471b9dc21bdc70371f7 654 PANTHER PTHR30290 1 311 1.3E-116 T 26-04-2016 smi_0291 7208cec5b42da471b9dc21bdc70371f7 654 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 76 518 1.4E-50 T 26-04-2016 IPR000914 Solute-binding protein family 5 domain smi_0291 7208cec5b42da471b9dc21bdc70371f7 654 Gene3D G3DSA:3.10.105.10 301 581 1.0E-31 T 26-04-2016 smi_0291 7208cec5b42da471b9dc21bdc70371f7 654 PANTHER PTHR30290:SF10 330 629 1.3E-116 T 26-04-2016 smi_0291 7208cec5b42da471b9dc21bdc70371f7 654 PANTHER PTHR30290:SF10 1 311 1.3E-116 T 26-04-2016 smi_0291 7208cec5b42da471b9dc21bdc70371f7 654 SUPERFAMILY SSF53850 28 593 1.36E-76 T 26-04-2016 smi_1178 c96947740ab26fc9b5e84f9a1b475b19 393 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 38 172 1.3E-17 T 26-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 smi_1178 c96947740ab26fc9b5e84f9a1b475b19 393 SUPERFAMILY SSF55811 223 371 1.48E-19 T 26-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 smi_1178 c96947740ab26fc9b5e84f9a1b475b19 393 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 10 272 4.8E-98 T 26-04-2016 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 smi_1178 c96947740ab26fc9b5e84f9a1b475b19 393 Gene3D G3DSA:3.90.79.10 237 373 2.1E-30 T 26-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 smi_1178 c96947740ab26fc9b5e84f9a1b475b19 393 SMART SM00478 42 193 3.9E-44 T 26-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 smi_1178 c96947740ab26fc9b5e84f9a1b475b19 393 Pfam PF00633 Helix-hairpin-helix motif 103 130 5.0E-7 T 26-04-2016 IPR000445 Helix-hairpin-helix motif GO:0003677 smi_1178 c96947740ab26fc9b5e84f9a1b475b19 393 Pfam PF14815 NUDIX domain 238 370 3.2E-17 T 26-04-2016 IPR029119 MutY, C-terminal smi_1178 c96947740ab26fc9b5e84f9a1b475b19 393 Gene3D G3DSA:1.10.1670.10 126 226 2.9E-33 T 26-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal smi_1178 c96947740ab26fc9b5e84f9a1b475b19 393 PANTHER PTHR10359 5 354 1.7E-104 T 26-04-2016 smi_1178 c96947740ab26fc9b5e84f9a1b475b19 393 Gene3D G3DSA:1.10.340.30 24 125 4.4E-44 T 26-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 smi_1178 c96947740ab26fc9b5e84f9a1b475b19 393 SUPERFAMILY SSF48150 7 225 1.02E-70 T 26-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 smi_1438 e7dbc5ea7e9fc6408866c2b709b3fcf4 252 PIRSF PIRSF039085 2 244 3.6E-101 T 26-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 smi_1438 e7dbc5ea7e9fc6408866c2b709b3fcf4 252 PANTHER PTHR24220 7 241 1.6E-119 T 26-04-2016 smi_1438 e7dbc5ea7e9fc6408866c2b709b3fcf4 252 SUPERFAMILY SSF52540 5 239 3.67E-74 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1438 e7dbc5ea7e9fc6408866c2b709b3fcf4 252 SMART SM00382 30 217 2.9E-14 T 26-04-2016 IPR003593 AAA+ ATPase domain smi_1438 e7dbc5ea7e9fc6408866c2b709b3fcf4 252 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 26-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 smi_1438 e7dbc5ea7e9fc6408866c2b709b3fcf4 252 PANTHER PTHR24220:SF327 7 241 1.6E-119 T 26-04-2016 smi_1438 e7dbc5ea7e9fc6408866c2b709b3fcf4 252 Gene3D G3DSA:3.40.50.300 4 240 1.3E-84 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1438 e7dbc5ea7e9fc6408866c2b709b3fcf4 252 Pfam PF00005 ABC transporter 21 169 9.6E-36 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 smi_0891 f433057ac9d44dca0569e8280cb239b9 129 Gene3D G3DSA:3.40.140.10 3 126 1.7E-50 T 26-04-2016 smi_0891 f433057ac9d44dca0569e8280cb239b9 129 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 53 93 - T 26-04-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 smi_0891 f433057ac9d44dca0569e8280cb239b9 129 TIGRFAM TIGR01354 cyt_deam_tetra: cytidine deaminase 5 126 8.3E-46 T 26-04-2016 IPR006262 Cytidine deaminase, homotetrameric GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 smi_0891 f433057ac9d44dca0569e8280cb239b9 129 SUPERFAMILY SSF53927 3 126 9.87E-47 T 26-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 smi_0891 f433057ac9d44dca0569e8280cb239b9 129 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 4 96 5.7E-18 T 26-04-2016 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 smi_0891 f433057ac9d44dca0569e8280cb239b9 129 PANTHER PTHR11644 5 126 7.7E-55 T 26-04-2016 smi_1528 912e75f8f3f33c959534af6e65dc098b 143 Gene3D G3DSA:3.10.450.40 88 138 1.0E-10 T 26-04-2016 smi_1528 912e75f8f3f33c959534af6e65dc098b 143 SUPERFAMILY SSF54403 87 140 3.06E-9 T 26-04-2016 smi_1528 912e75f8f3f33c959534af6e65dc098b 143 SUPERFAMILY SSF54403 24 87 1.79E-16 T 26-04-2016 smi_1528 912e75f8f3f33c959534af6e65dc098b 143 Gene3D G3DSA:3.10.450.40 18 87 2.1E-26 T 26-04-2016 smi_0563 512ab60ee60609ee1be1799a678186bd 325 Gene3D G3DSA:3.40.50.150 118 309 3.4E-45 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase smi_0563 512ab60ee60609ee1be1799a678186bd 325 PIRSF PIRSF000401 11 317 1.5E-106 T 26-04-2016 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 smi_0563 512ab60ee60609ee1be1799a678186bd 325 SUPERFAMILY SSF53335 67 313 6.02E-41 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase smi_0563 512ab60ee60609ee1be1799a678186bd 325 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 13 315 34.202 T 26-04-2016 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 smi_0563 512ab60ee60609ee1be1799a678186bd 325 TIGRFAM TIGR00406 prmA: ribosomal protein L11 methyltransferase 13 308 6.0E-71 T 26-04-2016 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 smi_0563 512ab60ee60609ee1be1799a678186bd 325 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 12 315 6.5E-110 T 26-04-2016 smi_0563 512ab60ee60609ee1be1799a678186bd 325 PANTHER PTHR18895:SF3 26 320 2.2E-98 T 26-04-2016 smi_0563 512ab60ee60609ee1be1799a678186bd 325 PANTHER PTHR18895 26 320 2.2E-98 T 26-04-2016 smi_1915 bbdce6e876c5a56d710aaba879213a68 510 Gene3D G3DSA:3.30.870.10 350 484 4.0E-28 T 26-04-2016 smi_1915 bbdce6e876c5a56d710aaba879213a68 510 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 41 510 9.6E-108 T 26-04-2016 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 smi_1915 bbdce6e876c5a56d710aaba879213a68 510 Gene3D G3DSA:3.30.870.10 141 339 8.9E-47 T 26-04-2016 smi_1915 bbdce6e876c5a56d710aaba879213a68 510 SMART SM00155 245 272 1.1E-5 T 26-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 smi_1915 bbdce6e876c5a56d710aaba879213a68 510 SMART SM00155 424 451 0.0077 T 26-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 smi_1915 bbdce6e876c5a56d710aaba879213a68 510 SUPERFAMILY SSF56024 139 338 3.81E-44 T 26-04-2016 smi_1915 bbdce6e876c5a56d710aaba879213a68 510 Pfam PF13396 Phospholipase_D-nuclease N-terminal 52 88 4.1E-6 T 26-04-2016 IPR027379 Cardiolipin synthase N-terminal smi_1915 bbdce6e876c5a56d710aaba879213a68 510 SUPERFAMILY SSF56024 298 489 6.28E-35 T 26-04-2016 smi_1915 bbdce6e876c5a56d710aaba879213a68 510 PANTHER PTHR21248 48 510 3.7E-122 T 26-04-2016 smi_1915 bbdce6e876c5a56d710aaba879213a68 510 Pfam PF13091 PLD-like domain 353 478 1.3E-22 T 26-04-2016 IPR025202 Phospholipase D-like domain smi_1915 bbdce6e876c5a56d710aaba879213a68 510 Pfam PF13091 PLD-like domain 163 292 6.6E-11 T 26-04-2016 IPR025202 Phospholipase D-like domain smi_1915 bbdce6e876c5a56d710aaba879213a68 510 PANTHER PTHR21248:SF5 48 510 3.7E-122 T 26-04-2016 smi_1928 b61e3e4217d5b0b59fe1672fa8a67b7e 320 SUPERFAMILY SSF52317 2 143 6.41E-30 T 26-04-2016 IPR029062 Class I glutamine amidotransferase-like smi_1928 b61e3e4217d5b0b59fe1672fa8a67b7e 320 SUPERFAMILY SSF141986 171 312 4.32E-20 T 26-04-2016 IPR027461 LD-carboxypeptidase A, C-terminal domain smi_1928 b61e3e4217d5b0b59fe1672fa8a67b7e 320 PIRSF PIRSF028757 1 320 1.3E-45 T 26-04-2016 IPR003507 Peptidase family S66 smi_1928 b61e3e4217d5b0b59fe1672fa8a67b7e 320 Gene3D G3DSA:3.50.30.60 174 315 4.3E-28 T 26-04-2016 IPR027461 LD-carboxypeptidase A, C-terminal domain smi_1928 b61e3e4217d5b0b59fe1672fa8a67b7e 320 PANTHER PTHR30237:SF4 213 319 3.4E-162 T 26-04-2016 smi_1928 b61e3e4217d5b0b59fe1672fa8a67b7e 320 Gene3D G3DSA:3.40.50.10740 2 145 1.1E-33 T 26-04-2016 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal domain smi_1928 b61e3e4217d5b0b59fe1672fa8a67b7e 320 PANTHER PTHR30237 1 196 3.4E-162 T 26-04-2016 smi_1928 b61e3e4217d5b0b59fe1672fa8a67b7e 320 PANTHER PTHR30237 213 319 3.4E-162 T 26-04-2016 smi_1928 b61e3e4217d5b0b59fe1672fa8a67b7e 320 Pfam PF02016 LD-carboxypeptidase 2 306 9.4E-58 T 26-04-2016 IPR003507 Peptidase family S66 smi_1928 b61e3e4217d5b0b59fe1672fa8a67b7e 320 PANTHER PTHR30237:SF4 1 196 3.4E-162 T 26-04-2016 smi_0962 c2a0014f5661fbafb3c033d002bb43ed 126 PANTHER PTHR10374:SF8 4 126 1.6E-42 T 26-04-2016 smi_0962 c2a0014f5661fbafb3c033d002bb43ed 126 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 122 3.1E-19 T 26-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain smi_0962 c2a0014f5661fbafb3c033d002bb43ed 126 PANTHER PTHR10374 4 126 1.6E-42 T 26-04-2016 smi_0962 c2a0014f5661fbafb3c033d002bb43ed 126 SUPERFAMILY SSF54593 3 123 5.37E-33 T 26-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase smi_0962 c2a0014f5661fbafb3c033d002bb43ed 126 Gene3D G3DSA:3.10.180.10 4 124 9.1E-36 T 26-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase smi_0962 c2a0014f5661fbafb3c033d002bb43ed 126 ProSitePatterns PS00934 Glyoxalase I signature 1. 7 28 - T 26-04-2016 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|UniPathway: UPA00619 smi_0075 f93dad13a9392e8f12a07a7cea1876b8 363 SUPERFAMILY SSF52440 3 89 5.18E-27 T 26-04-2016 IPR016185 Pre-ATP-grasp domain smi_0075 f93dad13a9392e8f12a07a7cea1876b8 363 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 6 354 1.9E-109 T 26-04-2016 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 smi_0075 f93dad13a9392e8f12a07a7cea1876b8 363 PANTHER PTHR11609:SF5 1 356 3.2E-129 T 26-04-2016 smi_0075 f93dad13a9392e8f12a07a7cea1876b8 363 Pfam PF02222 ATP-grasp domain 112 276 1.9E-47 T 26-04-2016 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type UniPathway: UPA00074 smi_0075 f93dad13a9392e8f12a07a7cea1876b8 363 Gene3D G3DSA:3.30.470.20 179 354 1.5E-61 T 26-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 smi_0075 f93dad13a9392e8f12a07a7cea1876b8 363 SUPERFAMILY SSF56059 101 296 4.65E-54 T 26-04-2016 smi_0075 f93dad13a9392e8f12a07a7cea1876b8 363 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 6 351 40.437 T 26-04-2016 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 smi_0075 f93dad13a9392e8f12a07a7cea1876b8 363 Gene3D G3DSA:3.30.1490.20 117 178 8.3E-19 T 26-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 smi_0075 f93dad13a9392e8f12a07a7cea1876b8 363 PANTHER PTHR11609 1 356 3.2E-129 T 26-04-2016 smi_0075 f93dad13a9392e8f12a07a7cea1876b8 363 SUPERFAMILY SSF51246 300 355 1.73E-15 T 26-04-2016 IPR011054 Rudiment single hybrid motif smi_0075 f93dad13a9392e8f12a07a7cea1876b8 363 Gene3D G3DSA:3.40.50.20 3 109 1.6E-37 T 26-04-2016 IPR016185 Pre-ATP-grasp domain smi_1437 9bfd6cb6e65fc3bd7aa5ecdd1382b85a 225 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 17 113 1.4E-20 T 26-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 smi_1437 9bfd6cb6e65fc3bd7aa5ecdd1382b85a 225 PANTHER PTHR30614 13 224 4.3E-49 T 26-04-2016 smi_1437 9bfd6cb6e65fc3bd7aa5ecdd1382b85a 225 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 40 222 6.9E-14 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 smi_1437 9bfd6cb6e65fc3bd7aa5ecdd1382b85a 225 Gene3D G3DSA:1.10.3720.10 17 224 1.9E-35 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 smi_1437 9bfd6cb6e65fc3bd7aa5ecdd1382b85a 225 SUPERFAMILY SSF161098 18 215 4.45E-35 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 smi_1242 d287b580c4e76a6765cdd77be47c39a3 186 SUPERFAMILY SSF140478 23 170 1.83E-55 T 26-04-2016 IPR023353 LemA-like domain smi_1242 d287b580c4e76a6765cdd77be47c39a3 186 PANTHER PTHR34478:SF2 1 184 5.7E-92 T 26-04-2016 smi_1242 d287b580c4e76a6765cdd77be47c39a3 186 PANTHER PTHR34478 1 184 5.7E-92 T 26-04-2016 smi_1242 d287b580c4e76a6765cdd77be47c39a3 186 Pfam PF04011 LemA family 4 181 2.1E-70 T 26-04-2016 IPR007156 LemA smi_1242 d287b580c4e76a6765cdd77be47c39a3 186 Gene3D G3DSA:1.20.1440.20 11 181 1.4E-66 T 26-04-2016 IPR023353 LemA-like domain smi_0188 ee0fefdf564aff038acfd96c77141135 208 Gene3D G3DSA:3.60.10.10 2 171 2.3E-12 T 26-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase smi_0188 ee0fefdf564aff038acfd96c77141135 208 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 8 176 2.9E-8 T 26-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase smi_0188 ee0fefdf564aff038acfd96c77141135 208 SUPERFAMILY SSF56219 4 203 5.23E-18 T 26-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase smi_2083 a72d6e60e657bc9f6abd235760a88a4a 250 PANTHER PTHR26402 1 226 3.3E-19 T 26-04-2016 smi_2083 a72d6e60e657bc9f6abd235760a88a4a 250 Gene3D G3DSA:3.40.50.2300 1 124 3.5E-12 T 26-04-2016 smi_2083 a72d6e60e657bc9f6abd235760a88a4a 250 Gene3D G3DSA:2.40.50.40 142 209 7.9E-10 T 26-04-2016 smi_2083 a72d6e60e657bc9f6abd235760a88a4a 250 SMART SM00850 148 245 3.2E-17 T 26-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 smi_2083 a72d6e60e657bc9f6abd235760a88a4a 250 Pfam PF00072 Response regulator receiver domain 3 121 8.2E-9 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 smi_2083 a72d6e60e657bc9f6abd235760a88a4a 250 SMART SM00448 1 121 8.7E-8 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 smi_2083 a72d6e60e657bc9f6abd235760a88a4a 250 Pfam PF04397 LytTr DNA-binding domain 151 244 5.8E-22 T 26-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 smi_2083 a72d6e60e657bc9f6abd235760a88a4a 250 SUPERFAMILY SSF52172 1 124 6.12E-10 T 26-04-2016 IPR011006 CheY-like superfamily smi_2083 a72d6e60e657bc9f6abd235760a88a4a 250 PANTHER PTHR26402:SF577 1 226 3.3E-19 T 26-04-2016 smi_1255 1f4fc4401970309cd85db213d787534d 434 Pfam PF01966 HD domain 53 174 3.9E-12 T 26-04-2016 IPR006674 HD domain smi_1255 1f4fc4401970309cd85db213d787534d 434 SMART SM00471 49 181 6.3E-12 T 26-04-2016 IPR003607 HD/PDEase domain smi_1255 1f4fc4401970309cd85db213d787534d 434 PANTHER PTHR11373 1 334 4.6E-98 T 26-04-2016 smi_1255 1f4fc4401970309cd85db213d787534d 434 Gene3D G3DSA:1.10.3210.10 2 254 6.3E-87 T 26-04-2016 IPR006674 HD domain smi_1255 1f4fc4401970309cd85db213d787534d 434 SUPERFAMILY SSF109604 2 415 3.32E-129 T 26-04-2016 smi_0010 616caf44b9f281bb842247b5d2be1baf 425 SUPERFAMILY SSF52402 12 217 8.16E-51 T 26-04-2016 smi_0010 616caf44b9f281bb842247b5d2be1baf 425 SMART SM00977 348 415 1.8E-12 T 26-04-2016 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 smi_0010 616caf44b9f281bb842247b5d2be1baf 425 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 7 289 22.026 T 26-04-2016 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 smi_0010 616caf44b9f281bb842247b5d2be1baf 425 PANTHER PTHR11807 12 420 6.5E-76 T 26-04-2016 smi_0010 616caf44b9f281bb842247b5d2be1baf 425 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 21 194 5.4E-50 T 26-04-2016 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 smi_0010 616caf44b9f281bb842247b5d2be1baf 425 Gene3D G3DSA:3.40.50.620 13 166 1.7E-18 T 26-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold smi_0010 616caf44b9f281bb842247b5d2be1baf 425 SUPERFAMILY SSF56037 310 421 1.28E-12 T 26-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 smi_0010 616caf44b9f281bb842247b5d2be1baf 425 Pfam PF01171 PP-loop family 21 190 3.0E-51 T 26-04-2016 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal smi_0010 616caf44b9f281bb842247b5d2be1baf 425 TIGRFAM TIGR02433 lysidine_TilS_C: tRNA(Ile)-lysidine synthetase, C-terminal domain 348 390 2.8E-13 T 26-04-2016 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 smi_0010 616caf44b9f281bb842247b5d2be1baf 425 Pfam PF11734 TilS substrate C-terminal domain 350 412 6.5E-5 T 26-04-2016 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 smi_0010 616caf44b9f281bb842247b5d2be1baf 425 PANTHER PTHR11807:SF2 12 420 6.5E-76 T 26-04-2016 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 smi_1724 7adb47420463a75fa82af80be025b76d 356 SUPERFAMILY SSF69360 212 341 8.04E-17 T 26-04-2016 smi_1724 7adb47420463a75fa82af80be025b76d 356 PANTHER PTHR33308 219 352 1.7E-31 T 26-04-2016 smi_1724 7adb47420463a75fa82af80be025b76d 356 PANTHER PTHR33308:SF3 219 352 1.7E-31 T 26-04-2016 smi_1724 7adb47420463a75fa82af80be025b76d 356 Gene3D G3DSA:2.10.270.10 296 355 1.8E-8 T 26-04-2016 smi_1724 7adb47420463a75fa82af80be025b76d 356 Gene3D G3DSA:2.10.270.10 208 295 7.2E-7 T 26-04-2016 smi_1073 bc66869cfe72e737b0c4f18e08d2b3af 233 PANTHER PTHR26402:SF578 2 231 8.3E-66 T 26-04-2016 smi_1073 bc66869cfe72e737b0c4f18e08d2b3af 233 Gene3D G3DSA:3.40.50.2300 1 122 8.7E-34 T 26-04-2016 smi_1073 bc66869cfe72e737b0c4f18e08d2b3af 233 Gene3D G3DSA:1.10.10.10 135 230 5.3E-25 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain smi_1073 bc66869cfe72e737b0c4f18e08d2b3af 233 Pfam PF00072 Response regulator receiver domain 4 111 7.6E-24 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 smi_1073 bc66869cfe72e737b0c4f18e08d2b3af 233 SMART SM00448 2 111 2.8E-34 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 smi_1073 bc66869cfe72e737b0c4f18e08d2b3af 233 PANTHER PTHR26402 2 231 8.3E-66 T 26-04-2016 smi_1073 bc66869cfe72e737b0c4f18e08d2b3af 233 Pfam PF00486 Transcriptional regulatory protein, C terminal 153 227 3.3E-20 T 26-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 smi_1073 bc66869cfe72e737b0c4f18e08d2b3af 233 SMART SM00862 152 228 1.8E-21 T 26-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 smi_1073 bc66869cfe72e737b0c4f18e08d2b3af 233 SUPERFAMILY SSF52172 1 184 1.22E-35 T 26-04-2016 IPR011006 CheY-like superfamily smi_0330 f8bedead7cbac7b3086667716960d5b4 51 Gene3D G3DSA:2.60.40.1180 3 50 2.7E-10 T 26-04-2016 IPR013780 Glycosyl hydrolase, all-beta smi_0330 f8bedead7cbac7b3086667716960d5b4 51 SUPERFAMILY SSF51011 3 49 3.6E-7 T 26-04-2016 smi_1044 0e33af376a33f542346d476a6e36a6d8 72 TIGRFAM TIGR02194 GlrX_NrdH: glutaredoxin-like protein NrdH 2 72 1.3E-34 T 26-04-2016 IPR011909 Glutaredoxin-like protein NrdH GO:0045454 smi_1044 0e33af376a33f542346d476a6e36a6d8 72 SUPERFAMILY SSF52833 1 70 7.35E-17 T 26-04-2016 IPR012336 Thioredoxin-like fold smi_1044 0e33af376a33f542346d476a6e36a6d8 72 Pfam PF00462 Glutaredoxin 2 53 2.2E-14 T 26-04-2016 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 smi_1044 0e33af376a33f542346d476a6e36a6d8 72 PANTHER PTHR34386:SF1 1 71 1.7E-17 T 26-04-2016 smi_1044 0e33af376a33f542346d476a6e36a6d8 72 PANTHER PTHR34386 1 71 1.7E-17 T 26-04-2016 smi_1044 0e33af376a33f542346d476a6e36a6d8 72 Gene3D G3DSA:3.40.30.10 1 71 1.8E-25 T 26-04-2016 IPR012336 Thioredoxin-like fold smi_0865 4890503bb382117ac5b39c1df5084f60 752 Gene3D G3DSA:3.40.50.300 113 293 1.1E-44 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0865 4890503bb382117ac5b39c1df5084f60 752 Pfam PF07724 AAA domain (Cdc48 subfamily) 478 641 9.9E-48 T 26-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 smi_0865 4890503bb382117ac5b39c1df5084f60 752 Gene3D G3DSA:3.40.50.300 434 659 6.3E-58 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0865 4890503bb382117ac5b39c1df5084f60 752 Gene3D G3DSA:4.10.860.10 376 403 2.6E-4 T 26-04-2016 IPR001943 UVR domain GO:0005515 smi_0865 4890503bb382117ac5b39c1df5084f60 752 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 246 258 - T 26-04-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 smi_0865 4890503bb382117ac5b39c1df5084f60 752 Gene3D G3DSA:1.10.8.60 294 368 1.4E-31 T 26-04-2016 smi_0865 4890503bb382117ac5b39c1df5084f60 752 PANTHER PTHR11638:SF117 102 719 0.0 T 26-04-2016 smi_0865 4890503bb382117ac5b39c1df5084f60 752 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 513 531 - T 26-04-2016 IPR028299 ClpA/B, conserved site 2 smi_0865 4890503bb382117ac5b39c1df5084f60 752 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 649 723 2.3E-23 T 26-04-2016 IPR019489 Clp ATPase, C-terminal smi_0865 4890503bb382117ac5b39c1df5084f60 752 SMART SM00382 479 650 1.5E-12 T 26-04-2016 IPR003593 AAA+ ATPase domain smi_0865 4890503bb382117ac5b39c1df5084f60 752 SMART SM00382 150 290 7.2E-11 T 26-04-2016 IPR003593 AAA+ ATPase domain smi_0865 4890503bb382117ac5b39c1df5084f60 752 PANTHER PTHR11638 102 719 0.0 T 26-04-2016 smi_0865 4890503bb382117ac5b39c1df5084f60 752 Pfam PF02151 UvrB/uvrC motif 366 399 1.4E-7 T 26-04-2016 IPR001943 UVR domain GO:0005515 smi_0865 4890503bb382117ac5b39c1df5084f60 752 Gene3D G3DSA:1.10.8.60 660 745 1.2E-27 T 26-04-2016 smi_0865 4890503bb382117ac5b39c1df5084f60 752 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 155 274 1.4E-13 T 26-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 smi_0865 4890503bb382117ac5b39c1df5084f60 752 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 528 546 1.5E-36 T 26-04-2016 IPR001270 ClpA/B family GO:0005524 smi_0865 4890503bb382117ac5b39c1df5084f60 752 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 590 604 1.5E-36 T 26-04-2016 IPR001270 ClpA/B family GO:0005524 smi_0865 4890503bb382117ac5b39c1df5084f60 752 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 557 575 1.5E-36 T 26-04-2016 IPR001270 ClpA/B family GO:0005524 smi_0865 4890503bb382117ac5b39c1df5084f60 752 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 483 501 1.5E-36 T 26-04-2016 IPR001270 ClpA/B family GO:0005524 smi_0865 4890503bb382117ac5b39c1df5084f60 752 SMART SM01086 649 737 1.3E-28 T 26-04-2016 IPR019489 Clp ATPase, C-terminal smi_0865 4890503bb382117ac5b39c1df5084f60 752 SUPERFAMILY SSF52540 112 364 3.6E-67 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0865 4890503bb382117ac5b39c1df5084f60 752 SUPERFAMILY SSF52540 428 720 5.76E-75 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0794 0b8ace4dccaf3d90253d1476962bbf19 305 SMART SM01130 6 301 3.8E-66 T 26-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 smi_0794 0b8ace4dccaf3d90253d1476962bbf19 305 PANTHER PTHR12128 8 299 1.4E-106 T 26-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 smi_0794 0b8ace4dccaf3d90253d1476962bbf19 305 SUPERFAMILY SSF51569 6 294 1.99E-71 T 26-04-2016 smi_0794 0b8ace4dccaf3d90253d1476962bbf19 305 PIRSF PIRSF001365 2 305 5.8E-74 T 26-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 smi_0794 0b8ace4dccaf3d90253d1476962bbf19 305 Gene3D G3DSA:3.20.20.70 5 301 1.0E-75 T 26-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 smi_0794 0b8ace4dccaf3d90253d1476962bbf19 305 PANTHER PTHR12128:SF30 8 299 1.4E-106 T 26-04-2016 smi_0794 0b8ace4dccaf3d90253d1476962bbf19 305 Pfam PF00701 Dihydrodipicolinate synthetase family 7 287 1.8E-54 T 26-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 smi_0794 0b8ace4dccaf3d90253d1476962bbf19 305 PRINTS PR00146 Dihydrodipicolinate synthase signature 40 61 8.4E-13 T 26-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 smi_0794 0b8ace4dccaf3d90253d1476962bbf19 305 PRINTS PR00146 Dihydrodipicolinate synthase signature 108 124 8.4E-13 T 26-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 smi_0794 0b8ace4dccaf3d90253d1476962bbf19 305 PRINTS PR00146 Dihydrodipicolinate synthase signature 76 94 8.4E-13 T 26-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 smi_0794 0b8ace4dccaf3d90253d1476962bbf19 305 PRINTS PR00146 Dihydrodipicolinate synthase signature 134 151 8.4E-13 T 26-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 smi_1892 e7ea4a6f61cfb47f5b1dfdb15fdcdd04 61 ProSitePatterns PS00527 Ribosomal protein S14 signature. 23 45 - T 26-04-2016 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 smi_1892 e7ea4a6f61cfb47f5b1dfdb15fdcdd04 61 PANTHER PTHR19836 15 61 1.5E-35 T 26-04-2016 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_1892 e7ea4a6f61cfb47f5b1dfdb15fdcdd04 61 Hamap MF_01364_B 30S ribosomal protein S14 type Z [rpsZ]. 1 61 25.885 T 26-04-2016 IPR023053 Ribosomal protein S14, type Z smi_1892 e7ea4a6f61cfb47f5b1dfdb15fdcdd04 61 SUPERFAMILY SSF57716 4 61 3.07E-21 T 26-04-2016 smi_1892 e7ea4a6f61cfb47f5b1dfdb15fdcdd04 61 Pfam PF00253 Ribosomal protein S14p/S29e 12 60 2.1E-24 T 26-04-2016 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_1892 e7ea4a6f61cfb47f5b1dfdb15fdcdd04 61 Gene3D G3DSA:4.10.830.10 1 61 4.8E-28 T 26-04-2016 smi_0032 534ac1da084f9b1caafe96760173a1f6 388 Pfam PF13936 Helix-turn-helix domain 4 47 1.4E-16 T 26-04-2016 IPR025246 Transposase IS30-like HTH domain smi_0032 534ac1da084f9b1caafe96760173a1f6 388 PANTHER PTHR10948 1 372 1.4E-16 T 26-04-2016 smi_0032 534ac1da084f9b1caafe96760173a1f6 388 SUPERFAMILY SSF53098 207 358 1.97E-9 T 26-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 smi_0032 534ac1da084f9b1caafe96760173a1f6 388 Gene3D G3DSA:3.30.420.10 209 358 9.8E-6 T 26-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 smi_1167 534ac1da084f9b1caafe96760173a1f6 388 Pfam PF13936 Helix-turn-helix domain 4 47 1.4E-16 T 26-04-2016 IPR025246 Transposase IS30-like HTH domain smi_1167 534ac1da084f9b1caafe96760173a1f6 388 PANTHER PTHR10948 1 372 1.4E-16 T 26-04-2016 smi_1167 534ac1da084f9b1caafe96760173a1f6 388 SUPERFAMILY SSF53098 207 358 1.97E-9 T 26-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 smi_1167 534ac1da084f9b1caafe96760173a1f6 388 Gene3D G3DSA:3.30.420.10 209 358 9.8E-6 T 26-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 smi_0042 534ac1da084f9b1caafe96760173a1f6 388 Pfam PF13936 Helix-turn-helix domain 4 47 1.4E-16 T 26-04-2016 IPR025246 Transposase IS30-like HTH domain smi_0042 534ac1da084f9b1caafe96760173a1f6 388 PANTHER PTHR10948 1 372 1.4E-16 T 26-04-2016 smi_0042 534ac1da084f9b1caafe96760173a1f6 388 SUPERFAMILY SSF53098 207 358 1.97E-9 T 26-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 smi_0042 534ac1da084f9b1caafe96760173a1f6 388 Gene3D G3DSA:3.30.420.10 209 358 9.8E-6 T 26-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 smi_0929 534ac1da084f9b1caafe96760173a1f6 388 Pfam PF13936 Helix-turn-helix domain 4 47 1.4E-16 T 26-04-2016 IPR025246 Transposase IS30-like HTH domain smi_0929 534ac1da084f9b1caafe96760173a1f6 388 PANTHER PTHR10948 1 372 1.4E-16 T 26-04-2016 smi_0929 534ac1da084f9b1caafe96760173a1f6 388 SUPERFAMILY SSF53098 207 358 1.97E-9 T 26-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 smi_0929 534ac1da084f9b1caafe96760173a1f6 388 Gene3D G3DSA:3.30.420.10 209 358 9.8E-6 T 26-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 smi_1479 114f3afa01eaf57a1d5f736d8dc8f981 190 SMART SM00894 31 67 8.7E-19 T 26-04-2016 IPR008613 Excalibur calcium-binding domain smi_1479 114f3afa01eaf57a1d5f736d8dc8f981 190 Pfam PF05901 Excalibur calcium-binding domain 32 67 7.5E-13 T 26-04-2016 IPR008613 Excalibur calcium-binding domain smi_1479 114f3afa01eaf57a1d5f736d8dc8f981 190 PANTHER PTHR33308 28 175 2.5E-64 T 26-04-2016 smi_1479 114f3afa01eaf57a1d5f736d8dc8f981 190 Gene3D G3DSA:2.20.120.10 151 181 3.1E-6 T 26-04-2016 smi_1479 114f3afa01eaf57a1d5f736d8dc8f981 190 SUPERFAMILY SSF69360 86 188 5.62E-20 T 26-04-2016 smi_1479 114f3afa01eaf57a1d5f736d8dc8f981 190 Gene3D G3DSA:2.10.270.10 94 150 7.5E-12 T 26-04-2016 smi_1479 114f3afa01eaf57a1d5f736d8dc8f981 190 PANTHER PTHR33308:SF3 28 175 2.5E-64 T 26-04-2016 smi_1479 114f3afa01eaf57a1d5f736d8dc8f981 190 Pfam PF01473 Putative cell wall binding repeat 133 152 1.8E-4 T 26-04-2016 IPR018337 Cell wall/choline-binding repeat smi_1479 114f3afa01eaf57a1d5f736d8dc8f981 190 Pfam PF01473 Putative cell wall binding repeat 161 169 0.31 T 26-04-2016 IPR018337 Cell wall/choline-binding repeat smi_1479 114f3afa01eaf57a1d5f736d8dc8f981 190 Pfam PF01473 Putative cell wall binding repeat 94 108 1.9E-4 T 26-04-2016 IPR018337 Cell wall/choline-binding repeat smi_1024 0dbd8e628b316ce99a8858595d1b1948 491 PANTHER PTHR37324 6 490 4.9E-76 T 26-04-2016 smi_1024 0dbd8e628b316ce99a8858595d1b1948 491 PIRSF PIRSF006304 8 491 1.7E-149 T 26-04-2016 IPR013853 Galactitol permease IIC component GO:0015577|GO:0015796 smi_1024 0dbd8e628b316ce99a8858595d1b1948 491 Pfam PF03611 PTS system sugar-specific permease component 15 418 4.1E-48 T 26-04-2016 IPR004703 Phosphotransferase system, sugar-specific permease component GO:0009401|GO:0016021 smi_1227 dad80cc7039fd6630338f32e2faaa984 340 SUPERFAMILY SSF50129 6 174 1.42E-23 T 26-04-2016 IPR011032 GroES-like smi_1227 dad80cc7039fd6630338f32e2faaa984 340 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 27 131 3.7E-11 T 26-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 smi_1227 dad80cc7039fd6630338f32e2faaa984 340 PANTHER PTHR11695 13 340 6.3E-159 T 26-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 smi_1227 dad80cc7039fd6630338f32e2faaa984 340 Gene3D G3DSA:3.40.50.720 174 299 1.7E-8 T 26-04-2016 IPR016040 NAD(P)-binding domain smi_1227 dad80cc7039fd6630338f32e2faaa984 340 PANTHER PTHR11695:SF561 13 340 6.3E-159 T 26-04-2016 smi_1227 dad80cc7039fd6630338f32e2faaa984 340 SUPERFAMILY SSF51735 140 297 2.96E-10 T 26-04-2016 IPR016040 NAD(P)-binding domain smi_1227 dad80cc7039fd6630338f32e2faaa984 340 Gene3D G3DSA:3.90.180.10 17 173 5.3E-20 T 26-04-2016 IPR011032 GroES-like smi_0073 f8aa9bd9ea3a8abfbd93d6e4f4dae9db 421 SMART SM01209 102 294 1.6E-131 T 26-04-2016 smi_0073 f8aa9bd9ea3a8abfbd93d6e4f4dae9db 421 SUPERFAMILY SSF51246 326 419 4.24E-20 T 26-04-2016 IPR011054 Rudiment single hybrid motif smi_0073 f8aa9bd9ea3a8abfbd93d6e4f4dae9db 421 SUPERFAMILY SSF56059 103 322 4.07E-64 T 26-04-2016 smi_0073 f8aa9bd9ea3a8abfbd93d6e4f4dae9db 421 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 103 294 1.7E-79 T 26-04-2016 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 smi_0073 f8aa9bd9ea3a8abfbd93d6e4f4dae9db 421 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 101 1.4E-30 T 26-04-2016 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 smi_0073 f8aa9bd9ea3a8abfbd93d6e4f4dae9db 421 Gene3D G3DSA:3.40.50.20 2 94 6.6E-33 T 26-04-2016 IPR016185 Pre-ATP-grasp domain smi_0073 f8aa9bd9ea3a8abfbd93d6e4f4dae9db 421 Gene3D G3DSA:3.90.600.10 328 420 2.0E-20 T 26-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 smi_0073 f8aa9bd9ea3a8abfbd93d6e4f4dae9db 421 SMART SM01210 327 419 9.4E-28 T 26-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 smi_0073 f8aa9bd9ea3a8abfbd93d6e4f4dae9db 421 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 288 295 - T 26-04-2016 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 smi_0073 f8aa9bd9ea3a8abfbd93d6e4f4dae9db 421 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 419 41.654 T 26-04-2016 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 smi_0073 f8aa9bd9ea3a8abfbd93d6e4f4dae9db 421 Gene3D G3DSA:3.30.1490.20 120 189 4.9E-31 T 26-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 smi_0073 f8aa9bd9ea3a8abfbd93d6e4f4dae9db 421 Gene3D G3DSA:3.30.470.20 190 322 1.8E-56 T 26-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 smi_0073 f8aa9bd9ea3a8abfbd93d6e4f4dae9db 421 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 329 416 4.6E-19 T 26-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 smi_0073 f8aa9bd9ea3a8abfbd93d6e4f4dae9db 421 SUPERFAMILY SSF52440 1 101 6.62E-30 T 26-04-2016 IPR016185 Pre-ATP-grasp domain smi_0073 f8aa9bd9ea3a8abfbd93d6e4f4dae9db 421 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 419 1.3E-146 T 26-04-2016 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 smi_0073 f8aa9bd9ea3a8abfbd93d6e4f4dae9db 421 PANTHER PTHR10520 1 421 2.0E-222 T 26-04-2016 smi_1977 b62b6588aacf26a8a4cef81fb2f156d5 287 SMART SM00530 8 62 2.1E-8 T 26-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 smi_1977 b62b6588aacf26a8a4cef81fb2f156d5 287 PANTHER PTHR37038:SF2 3 281 1.1E-96 T 26-04-2016 smi_1977 b62b6588aacf26a8a4cef81fb2f156d5 287 PANTHER PTHR37038 3 281 1.1E-96 T 26-04-2016 smi_1977 b62b6588aacf26a8a4cef81fb2f156d5 287 Gene3D G3DSA:1.10.260.40 4 62 2.8E-10 T 26-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 smi_1977 b62b6588aacf26a8a4cef81fb2f156d5 287 SUPERFAMILY SSF47413 4 64 2.39E-12 T 26-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 smi_1977 b62b6588aacf26a8a4cef81fb2f156d5 287 Pfam PF12844 Helix-turn-helix domain 10 62 2.5E-10 T 26-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 smi_0751 3b7d078c3e0ad4cd5dacd529c240a309 249 PANTHER PTHR24220:SF160 3 235 2.7E-86 T 26-04-2016 smi_0751 3b7d078c3e0ad4cd5dacd529c240a309 249 Gene3D G3DSA:3.40.50.300 1 223 2.1E-63 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0751 3b7d078c3e0ad4cd5dacd529c240a309 249 SUPERFAMILY SSF52540 1 223 9.61E-59 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0751 3b7d078c3e0ad4cd5dacd529c240a309 249 Pfam PF00005 ABC transporter 17 160 1.3E-27 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 smi_0751 3b7d078c3e0ad4cd5dacd529c240a309 249 PANTHER PTHR24220 3 235 2.7E-86 T 26-04-2016 smi_0751 3b7d078c3e0ad4cd5dacd529c240a309 249 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 26-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 smi_0751 3b7d078c3e0ad4cd5dacd529c240a309 249 SMART SM00382 26 208 4.6E-8 T 26-04-2016 IPR003593 AAA+ ATPase domain smi_0970 fde9efb14aa3262a641930ac83851714 299 SUPERFAMILY SSF52540 8 203 8.37E-48 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0970 fde9efb14aa3262a641930ac83851714 299 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 6 165 3.7E-33 T 26-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 smi_0970 fde9efb14aa3262a641930ac83851714 299 Pfam PF01926 50S ribosome-binding GTPase 8 122 9.3E-24 T 26-04-2016 IPR006073 GTP binding domain GO:0005525 smi_0970 fde9efb14aa3262a641930ac83851714 299 PANTHER PTHR11649:SF3 4 299 3.8E-124 T 26-04-2016 smi_0970 fde9efb14aa3262a641930ac83851714 299 PANTHER PTHR11649 4 299 3.8E-124 T 26-04-2016 smi_0970 fde9efb14aa3262a641930ac83851714 299 Gene3D G3DSA:3.30.300.20 189 289 2.9E-42 T 26-04-2016 IPR015946 K homology domain-like, alpha/beta smi_0970 fde9efb14aa3262a641930ac83851714 299 TIGRFAM TIGR00436 era: GTP-binding protein Era 6 277 1.2E-106 T 26-04-2016 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 smi_0970 fde9efb14aa3262a641930ac83851714 299 SUPERFAMILY SSF54814 179 295 1.5E-42 T 26-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 smi_0970 fde9efb14aa3262a641930ac83851714 299 Hamap MF_00367 GTPase Era [era]. 3 294 38.098 T 26-04-2016 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 smi_0970 fde9efb14aa3262a641930ac83851714 299 Pfam PF07650 KH domain 205 283 8.3E-24 T 26-04-2016 IPR004044 K Homology domain, type 2 GO:0003723 smi_0970 fde9efb14aa3262a641930ac83851714 299 Gene3D G3DSA:3.40.50.300 7 188 4.1E-46 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1164 75d1a5e018946779c79596f288807842 379 TIGRFAM TIGR02092 glgD: glucose-1-phosphate adenylyltransferase, GlgD subunit 4 373 1.2E-148 T 26-04-2016 IPR011832 Glucose-1-phosphate adenylyltransferase, GlgD subunit GO:0005978 smi_1164 75d1a5e018946779c79596f288807842 379 PANTHER PTHR22572 6 377 1.1E-152 T 26-04-2016 smi_1164 75d1a5e018946779c79596f288807842 379 Gene3D G3DSA:3.90.550.10 305 348 1.1E-34 T 26-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases smi_1164 75d1a5e018946779c79596f288807842 379 Gene3D G3DSA:3.90.550.10 19 268 1.1E-34 T 26-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases smi_1164 75d1a5e018946779c79596f288807842 379 Pfam PF00483 Nucleotidyl transferase 22 258 9.2E-11 T 26-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 smi_1164 75d1a5e018946779c79596f288807842 379 SUPERFAMILY SSF51161 293 374 2.78E-10 T 26-04-2016 IPR011004 Trimeric LpxA-like smi_1164 75d1a5e018946779c79596f288807842 379 SUPERFAMILY SSF53448 322 337 1.25E-34 T 26-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases smi_1164 75d1a5e018946779c79596f288807842 379 SUPERFAMILY SSF53448 21 261 1.25E-34 T 26-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases smi_1164 75d1a5e018946779c79596f288807842 379 PANTHER PTHR22572:SF9 6 377 1.1E-152 T 26-04-2016 IPR011832 Glucose-1-phosphate adenylyltransferase, GlgD subunit GO:0005978 smi_1342 bd87d9c9ff10aac316e2844da0c6b5db 520 Gene3D G3DSA:3.40.50.880 9 220 2.1E-64 T 26-04-2016 IPR029062 Class I glutamine amidotransferase-like smi_1342 bd87d9c9ff10aac316e2844da0c6b5db 520 PRINTS PR00096 Glutamine amidotransferase superfamily signature 58 67 1.0E-7 T 26-04-2016 smi_1342 bd87d9c9ff10aac316e2844da0c6b5db 520 PRINTS PR00096 Glutamine amidotransferase superfamily signature 175 188 1.0E-7 T 26-04-2016 smi_1342 bd87d9c9ff10aac316e2844da0c6b5db 520 PRINTS PR00096 Glutamine amidotransferase superfamily signature 85 96 1.0E-7 T 26-04-2016 smi_1342 bd87d9c9ff10aac316e2844da0c6b5db 520 PANTHER PTHR11922:SF2 1 517 4.9E-293 T 26-04-2016 smi_1342 bd87d9c9ff10aac316e2844da0c6b5db 520 SUPERFAMILY SSF52402 191 442 3.35E-59 T 26-04-2016 smi_1342 bd87d9c9ff10aac316e2844da0c6b5db 520 PANTHER PTHR11922 1 517 4.9E-293 T 26-04-2016 smi_1342 bd87d9c9ff10aac316e2844da0c6b5db 520 Gene3D G3DSA:3.30.300.10 396 520 4.4E-51 T 26-04-2016 smi_1342 bd87d9c9ff10aac316e2844da0c6b5db 520 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 14 28 1.4E-6 T 26-04-2016 smi_1342 bd87d9c9ff10aac316e2844da0c6b5db 520 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 85 101 1.4E-6 T 26-04-2016 smi_1342 bd87d9c9ff10aac316e2844da0c6b5db 520 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 55 69 1.4E-6 T 26-04-2016 smi_1342 bd87d9c9ff10aac316e2844da0c6b5db 520 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 210 520 4.9E-153 T 26-04-2016 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 smi_1342 bd87d9c9ff10aac316e2844da0c6b5db 520 Pfam PF02540 NAD synthase 217 255 2.3E-7 T 26-04-2016 IPR022310 NAD/GMP synthase smi_1342 bd87d9c9ff10aac316e2844da0c6b5db 520 PRINTS PR00097 Anthranilate synthase component II signature 85 96 9.5E-6 T 26-04-2016 smi_1342 bd87d9c9ff10aac316e2844da0c6b5db 520 PRINTS PR00097 Anthranilate synthase component II signature 58 67 9.5E-6 T 26-04-2016 smi_1342 bd87d9c9ff10aac316e2844da0c6b5db 520 PRINTS PR00097 Anthranilate synthase component II signature 175 188 9.5E-6 T 26-04-2016 smi_1342 bd87d9c9ff10aac316e2844da0c6b5db 520 SUPERFAMILY SSF52317 11 235 4.58E-56 T 26-04-2016 IPR029062 Class I glutamine amidotransferase-like smi_1342 bd87d9c9ff10aac316e2844da0c6b5db 520 Gene3D G3DSA:3.40.50.620 221 395 1.7E-58 T 26-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold smi_1342 bd87d9c9ff10aac316e2844da0c6b5db 520 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 14 202 5.8E-70 T 26-04-2016 IPR004739 GMP synthase, N-terminal GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 smi_1342 bd87d9c9ff10aac316e2844da0c6b5db 520 Pfam PF00958 GMP synthase C terminal domain 428 519 1.3E-43 T 26-04-2016 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 smi_1342 bd87d9c9ff10aac316e2844da0c6b5db 520 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 11 520 53.517 T 26-04-2016 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 smi_1342 bd87d9c9ff10aac316e2844da0c6b5db 520 Pfam PF00117 Glutamine amidotransferase class-I 16 198 1.5E-41 T 26-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 smi_2055 9ddaf7c68ce683bf9763c9ee7eb46521 657 Pfam PF02272 DHHA1 domain 588 642 3.2E-9 T 26-04-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7 smi_2055 9ddaf7c68ce683bf9763c9ee7eb46521 657 Gene3D G3DSA:3.90.1640.10 338 529 3.1E-37 T 26-04-2016 smi_2055 9ddaf7c68ce683bf9763c9ee7eb46521 657 Pfam PF01368 DHH family 340 495 1.0E-19 T 26-04-2016 IPR001667 DDH domain smi_2055 9ddaf7c68ce683bf9763c9ee7eb46521 657 PIRSF PIRSF026583 1 656 1.3E-240 T 26-04-2016 IPR014528 Cyclic-di-AMP phosphodiesterase GdpP/PdeA smi_2055 9ddaf7c68ce683bf9763c9ee7eb46521 657 PANTHER PTHR12112:SF18 2 520 1.3E-74 T 26-04-2016 smi_2055 9ddaf7c68ce683bf9763c9ee7eb46521 657 PANTHER PTHR12112:SF18 560 616 1.3E-74 T 26-04-2016 smi_2055 9ddaf7c68ce683bf9763c9ee7eb46521 657 SUPERFAMILY SSF64182 338 638 1.1E-60 T 26-04-2016 smi_2055 9ddaf7c68ce683bf9763c9ee7eb46521 657 PANTHER PTHR12112 2 520 1.3E-74 T 26-04-2016 smi_2055 9ddaf7c68ce683bf9763c9ee7eb46521 657 PANTHER PTHR12112 560 616 1.3E-74 T 26-04-2016 smi_0741 5f220609a8d987168cafd25cdf98bc85 250 Pfam PF10086 Putative membrane peptidase family (DUF2324) 16 231 7.3E-72 T 26-04-2016 IPR011397 Uncharacterised conserved protein UCP033101 smi_0741 5f220609a8d987168cafd25cdf98bc85 250 PIRSF PIRSF033101 1 250 1.9E-97 T 26-04-2016 IPR011397 Uncharacterised conserved protein UCP033101 smi_0406 825d3ff677e15a3e6fb2967e0c8af240 253 SUPERFAMILY SSF51735 3 242 3.66E-62 T 26-04-2016 IPR016040 NAD(P)-binding domain smi_0406 825d3ff677e15a3e6fb2967e0c8af240 253 Pfam PF00106 short chain dehydrogenase 3 193 1.4E-53 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR smi_0406 825d3ff677e15a3e6fb2967e0c8af240 253 PANTHER PTHR24319 5 250 2.1E-57 T 26-04-2016 smi_0406 825d3ff677e15a3e6fb2967e0c8af240 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 1.3E-10 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR smi_0406 825d3ff677e15a3e6fb2967e0c8af240 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 1.3E-10 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR smi_0406 825d3ff677e15a3e6fb2967e0c8af240 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 1.3E-10 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR smi_0406 825d3ff677e15a3e6fb2967e0c8af240 253 Gene3D G3DSA:3.40.50.720 3 238 5.9E-65 T 26-04-2016 IPR016040 NAD(P)-binding domain smi_0406 825d3ff677e15a3e6fb2967e0c8af240 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 208 228 1.5E-28 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR smi_0406 825d3ff677e15a3e6fb2967e0c8af240 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 1.5E-28 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR smi_0406 825d3ff677e15a3e6fb2967e0c8af240 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 1.5E-28 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR smi_0406 825d3ff677e15a3e6fb2967e0c8af240 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 1.5E-28 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR smi_0406 825d3ff677e15a3e6fb2967e0c8af240 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 1.5E-28 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR smi_0406 825d3ff677e15a3e6fb2967e0c8af240 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 1.5E-28 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR smi_0406 825d3ff677e15a3e6fb2967e0c8af240 253 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 141 169 - T 26-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 smi_0406 825d3ff677e15a3e6fb2967e0c8af240 253 PANTHER PTHR24319:SF32 5 250 2.1E-57 T 26-04-2016 smi_0256 21b75f2494786daf6397f815b8dbda9c 294 PANTHER PTHR24220 5 222 2.2E-73 T 26-04-2016 smi_0256 21b75f2494786daf6397f815b8dbda9c 294 SMART SM00382 28 205 1.5E-9 T 26-04-2016 IPR003593 AAA+ ATPase domain smi_0256 21b75f2494786daf6397f815b8dbda9c 294 ProSitePatterns PS00211 ABC transporters family signature. 129 143 - T 26-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 smi_0256 21b75f2494786daf6397f815b8dbda9c 294 SUPERFAMILY SSF52540 3 215 4.61E-52 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0256 21b75f2494786daf6397f815b8dbda9c 294 Gene3D G3DSA:3.40.50.300 2 220 4.7E-57 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0256 21b75f2494786daf6397f815b8dbda9c 294 Pfam PF00005 ABC transporter 19 157 2.3E-25 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 smi_0256 21b75f2494786daf6397f815b8dbda9c 294 PANTHER PTHR24220:SF165 5 222 2.2E-73 T 26-04-2016 smi_0070 a1d7ebb08b13f7d973d93a142ca51fae 183 SUPERFAMILY SSF53328 2 178 3.66E-51 T 26-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 smi_0070 a1d7ebb08b13f7d973d93a142ca51fae 183 Pfam PF00551 Formyl transferase 2 175 8.9E-45 T 26-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 smi_0070 a1d7ebb08b13f7d973d93a142ca51fae 183 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 2 178 3.0E-57 T 26-04-2016 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|UniPathway: UPA00074 smi_0070 a1d7ebb08b13f7d973d93a142ca51fae 183 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 3 181 28.368 T 26-04-2016 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|UniPathway: UPA00074 smi_0070 a1d7ebb08b13f7d973d93a142ca51fae 183 Gene3D G3DSA:3.40.50.170 1 179 2.6E-61 T 26-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 smi_0070 a1d7ebb08b13f7d973d93a142ca51fae 183 PANTHER PTHR10520 1 178 9.0E-76 T 26-04-2016 smi_1352 58dc876e6702a2214f54df15ef9b252e 274 Pfam PF00756 Putative esterase 20 268 7.6E-22 T 26-04-2016 IPR000801 Putative esterase smi_1352 58dc876e6702a2214f54df15ef9b252e 274 PANTHER PTHR10907:SF58 9 208 1.3E-80 T 26-04-2016 smi_1352 58dc876e6702a2214f54df15ef9b252e 274 PANTHER PTHR10907 9 208 1.3E-80 T 26-04-2016 smi_1352 58dc876e6702a2214f54df15ef9b252e 274 Gene3D G3DSA:3.40.50.1820 10 271 1.1E-46 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold smi_1352 58dc876e6702a2214f54df15ef9b252e 274 SUPERFAMILY SSF53474 3 272 1.26E-42 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold smi_1169 ab63d7e930d0b4aedbbe431beb1f1f5d 652 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 394 420 3.0E-8 T 26-04-2016 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 smi_1169 ab63d7e930d0b4aedbbe431beb1f1f5d 652 SUPERFAMILY SSF52113 581 651 7.2E-19 T 26-04-2016 IPR001357 BRCT domain smi_1169 ab63d7e930d0b4aedbbe431beb1f1f5d 652 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 582 650 3.5E-13 T 26-04-2016 IPR001357 BRCT domain smi_1169 ab63d7e930d0b4aedbbe431beb1f1f5d 652 Gene3D G3DSA:1.10.287.610 2 64 1.2E-24 T 26-04-2016 smi_1169 ab63d7e930d0b4aedbbe431beb1f1f5d 652 SMART SM00292 579 652 1.5E-7 T 26-04-2016 IPR001357 BRCT domain smi_1169 ab63d7e930d0b4aedbbe431beb1f1f5d 652 Gene3D G3DSA:1.10.150.20 490 570 4.4E-23 T 26-04-2016 smi_1169 ab63d7e930d0b4aedbbe431beb1f1f5d 652 Pfam PF14520 Helix-hairpin-helix domain 432 487 4.8E-5 T 26-04-2016 smi_1169 ab63d7e930d0b4aedbbe431beb1f1f5d 652 PIRSF PIRSF001604 1 652 3.1E-241 T 26-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 smi_1169 ab63d7e930d0b4aedbbe431beb1f1f5d 652 Gene3D G3DSA:3.30.470.30 113 239 1.5E-44 T 26-04-2016 smi_1169 ab63d7e930d0b4aedbbe431beb1f1f5d 652 Gene3D G3DSA:2.40.50.140 308 379 1.7E-32 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold smi_1169 ab63d7e930d0b4aedbbe431beb1f1f5d 652 PANTHER PTHR23389:SF9 1 510 6.9E-181 T 26-04-2016 smi_1169 ab63d7e930d0b4aedbbe431beb1f1f5d 652 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 8 647 1.4E-241 T 26-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 smi_1169 ab63d7e930d0b4aedbbe431beb1f1f5d 652 PANTHER PTHR23389 1 510 6.9E-181 T 26-04-2016 smi_1169 ab63d7e930d0b4aedbbe431beb1f1f5d 652 SUPERFAMILY SSF50249 306 386 2.74E-26 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold smi_1169 ab63d7e930d0b4aedbbe431beb1f1f5d 652 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 2 306 8.6E-117 T 26-04-2016 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 smi_1169 ab63d7e930d0b4aedbbe431beb1f1f5d 652 Gene3D G3DSA:3.40.50.10190 580 651 3.1E-24 T 26-04-2016 IPR001357 BRCT domain smi_1169 ab63d7e930d0b4aedbbe431beb1f1f5d 652 SMART SM00278 466 485 140.0 T 26-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 smi_1169 ab63d7e930d0b4aedbbe431beb1f1f5d 652 SMART SM00278 432 451 8.1 T 26-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 smi_1169 ab63d7e930d0b4aedbbe431beb1f1f5d 652 Hamap MF_01588 DNA ligase [ligA]. 1 652 48.628 T 26-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 smi_1169 ab63d7e930d0b4aedbbe431beb1f1f5d 652 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 319 334 - T 26-04-2016 IPR033136 NAD-dependent DNA ligase, conserved site smi_1169 ab63d7e930d0b4aedbbe431beb1f1f5d 652 SUPERFAMILY SSF47781 391 570 1.33E-56 T 26-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 smi_1169 ab63d7e930d0b4aedbbe431beb1f1f5d 652 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 109 138 - T 26-04-2016 IPR018239 NAD-dependent DNA ligase, active site smi_1169 ab63d7e930d0b4aedbbe431beb1f1f5d 652 SUPERFAMILY SSF56091 2 306 7.38E-114 T 26-04-2016 smi_1169 ab63d7e930d0b4aedbbe431beb1f1f5d 652 Pfam PF12826 Helix-hairpin-helix motif 496 554 2.9E-19 T 26-04-2016 smi_1169 ab63d7e930d0b4aedbbe431beb1f1f5d 652 Gene3D G3DSA:1.10.150.20 421 489 2.1E-25 T 26-04-2016 smi_1169 ab63d7e930d0b4aedbbe431beb1f1f5d 652 SMART SM00532 3 434 1.8E-234 T 26-04-2016 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 smi_1169 ab63d7e930d0b4aedbbe431beb1f1f5d 652 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 310 385 2.1E-33 T 26-04-2016 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 smi_0005 06b937a8b174833162bda43f6ed54202 189 PANTHER PTHR17224:SF1 3 188 1.7E-77 T 26-04-2016 smi_0005 06b937a8b174833162bda43f6ed54202 189 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 15 28 - T 26-04-2016 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 smi_0005 06b937a8b174833162bda43f6ed54202 189 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 2 180 37.602 T 26-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 smi_0005 06b937a8b174833162bda43f6ed54202 189 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 3 188 8.0E-65 T 26-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 smi_0005 06b937a8b174833162bda43f6ed54202 189 SUPERFAMILY SSF53178 2 188 1.44E-67 T 26-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 smi_0005 06b937a8b174833162bda43f6ed54202 189 Gene3D G3DSA:3.40.50.1470 2 188 5.8E-70 T 26-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 smi_0005 06b937a8b174833162bda43f6ed54202 189 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 109 119 - T 26-04-2016 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 smi_0005 06b937a8b174833162bda43f6ed54202 189 Pfam PF01195 Peptidyl-tRNA hydrolase 4 187 3.4E-58 T 26-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 smi_0005 06b937a8b174833162bda43f6ed54202 189 PANTHER PTHR17224 3 188 1.7E-77 T 26-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 smi_0697 988e1e332136455aac4e9ad97278f4a4 101 TIGRFAM TIGR02384 RelB_DinJ: addiction module antitoxin, RelB/DinJ family 3 72 2.2E-17 T 26-04-2016 IPR007337 RelB antitoxin/Antitoxin DinJ smi_0697 988e1e332136455aac4e9ad97278f4a4 101 Pfam PF04221 RelB antitoxin 4 80 2.9E-17 T 26-04-2016 IPR007337 RelB antitoxin/Antitoxin DinJ smi_1886 5a86a473a7f9db702a9717474a3a2333 146 SUPERFAMILY SSF52080 4 144 9.68E-50 T 26-04-2016 IPR021131 Ribosomal protein L18e/L15P smi_1886 5a86a473a7f9db702a9717474a3a2333 146 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 144 5.7E-38 T 26-04-2016 IPR021131 Ribosomal protein L18e/L15P smi_1886 5a86a473a7f9db702a9717474a3a2333 146 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 2 144 1.0E-55 T 26-04-2016 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 smi_1886 5a86a473a7f9db702a9717474a3a2333 146 ProSitePatterns PS00475 Ribosomal protein L15 signature. 110 140 - T 26-04-2016 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_1886 5a86a473a7f9db702a9717474a3a2333 146 Gene3D G3DSA:3.100.10.10 32 146 1.1E-41 T 26-04-2016 smi_1886 5a86a473a7f9db702a9717474a3a2333 146 PANTHER PTHR12934 1 146 1.5E-77 T 26-04-2016 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 smi_1886 5a86a473a7f9db702a9717474a3a2333 146 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 146 22.713 T 26-04-2016 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 smi_1838 0976d401e12fc1f6d8e8b67bedee0563 456 PANTHER PTHR11206 2 447 6.0E-181 T 26-04-2016 smi_1838 0976d401e12fc1f6d8e8b67bedee0563 456 PIRSF PIRSF006603 1 443 4.3E-85 T 26-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 smi_1838 0976d401e12fc1f6d8e8b67bedee0563 456 PANTHER PTHR11206:SF107 2 447 6.0E-181 T 26-04-2016 smi_1838 0976d401e12fc1f6d8e8b67bedee0563 456 Pfam PF01554 MatE 24 183 6.6E-36 T 26-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 smi_1838 0976d401e12fc1f6d8e8b67bedee0563 456 Pfam PF01554 MatE 248 405 8.2E-16 T 26-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 smi_0940 2833bccf143dd2173b5c6f8aa560c200 105 Pfam PF06156 Protein of unknown function (DUF972) 1 99 2.8E-31 T 26-04-2016 IPR010377 Initiation control protein YabA GO:0006260 smi_0940 2833bccf143dd2173b5c6f8aa560c200 105 PIRSF PIRSF021439 1 105 2.0E-37 T 26-04-2016 IPR010377 Initiation control protein YabA GO:0006260 smi_0940 2833bccf143dd2173b5c6f8aa560c200 105 PANTHER PTHR41240 2 105 3.1E-44 T 26-04-2016 smi_0940 2833bccf143dd2173b5c6f8aa560c200 105 Hamap MF_01159 Initiation-control protein YabA. 1 104 23.983 T 26-04-2016 IPR010377 Initiation control protein YabA GO:0006260 smi_1662 8cc935cdfa75ff91dfed1cc3fd380fba 1591 Pfam PF00746 Gram positive anchor 1550 1585 1.8E-6 T 26-04-2016 IPR019948 Gram-positive anchor smi_1662 8cc935cdfa75ff91dfed1cc3fd380fba 1591 TIGRFAM TIGR01167 LPXTG_anchor: LPXTG cell wall anchor domain 1554 1588 3.3E-7 T 26-04-2016 IPR019931 LPXTG cell wall anchor domain smi_1662 8cc935cdfa75ff91dfed1cc3fd380fba 1591 TIGRFAM TIGR04224 ser_adhes_Nterm: serine-rich repeat adhesion glycoprotein 36 85 1.3E-20 T 26-04-2016 IPR026465 Serine-rich repeat adhesion glycoprotein smi_1662 8cc935cdfa75ff91dfed1cc3fd380fba 1591 TIGRFAM TIGR03715 KxYKxGKxW: KxYKxGKxW signal peptide 17 38 6.4E-7 T 26-04-2016 IPR022263 KxYKxGKxW signal peptide smi_1708 6e7f28f3c68690a08a45aa957aa2c97d 264 Gene3D G3DSA:3.30.200.20 1 91 3.4E-35 T 26-04-2016 smi_1708 6e7f28f3c68690a08a45aa957aa2c97d 264 SUPERFAMILY SSF56112 3 264 1.36E-61 T 26-04-2016 IPR011009 Protein kinase-like domain smi_1708 6e7f28f3c68690a08a45aa957aa2c97d 264 Gene3D G3DSA:3.90.1200.10 99 263 1.1E-39 T 26-04-2016 smi_1708 6e7f28f3c68690a08a45aa957aa2c97d 264 Pfam PF01636 Phosphotransferase enzyme family 52 256 2.9E-26 T 26-04-2016 IPR002575 Aminoglycoside phosphotransferase smi_1708 6e7f28f3c68690a08a45aa957aa2c97d 264 PIRSF PIRSF000706 1 264 1.5E-92 T 26-04-2016 IPR024165 Aminoglycoside 3-phosphotransferase GO:0005524|GO:0016773|GO:0046677 smi_1749 0e5abdbe1269632abfeb3ba488bcea92 229 PANTHER PTHR26402 3 229 2.0E-88 T 26-04-2016 smi_1749 0e5abdbe1269632abfeb3ba488bcea92 229 SMART SM00448 3 114 1.9E-8 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 smi_1749 0e5abdbe1269632abfeb3ba488bcea92 229 SMART SM00862 153 227 2.0E-21 T 26-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 smi_1749 0e5abdbe1269632abfeb3ba488bcea92 229 Gene3D G3DSA:3.40.50.2300 1 121 1.4E-18 T 26-04-2016 smi_1749 0e5abdbe1269632abfeb3ba488bcea92 229 PANTHER PTHR26402:SF607 3 229 2.0E-88 T 26-04-2016 smi_1749 0e5abdbe1269632abfeb3ba488bcea92 229 Gene3D G3DSA:1.10.10.10 136 228 7.7E-30 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain smi_1749 0e5abdbe1269632abfeb3ba488bcea92 229 Pfam PF00072 Response regulator receiver domain 5 114 1.2E-11 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 smi_1749 0e5abdbe1269632abfeb3ba488bcea92 229 SUPERFAMILY SSF52172 3 182 2.7E-19 T 26-04-2016 IPR011006 CheY-like superfamily smi_1749 0e5abdbe1269632abfeb3ba488bcea92 229 SUPERFAMILY SSF46894 136 227 6.24E-26 T 26-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 smi_1749 0e5abdbe1269632abfeb3ba488bcea92 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 154 226 1.8E-23 T 26-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 smi_0356 0082620cbd55c8e387d110db6f53136e 115 Gene3D G3DSA:3.40.50.880 1 102 3.9E-16 T 26-04-2016 IPR029062 Class I glutamine amidotransferase-like smi_0356 0082620cbd55c8e387d110db6f53136e 115 SUPERFAMILY SSF52317 1 102 1.62E-17 T 26-04-2016 IPR029062 Class I glutamine amidotransferase-like smi_0356 0082620cbd55c8e387d110db6f53136e 115 Pfam PF01965 DJ-1/PfpI family 2 103 8.7E-13 T 26-04-2016 IPR002818 DJ-1/PfpI smi_0600 69a4d11e262a488c121a4bb4cf767992 317 PANTHER PTHR40111 1 313 3.0E-101 T 26-04-2016 smi_0600 69a4d11e262a488c121a4bb4cf767992 317 PANTHER PTHR40111:SF1 1 313 3.0E-101 T 26-04-2016 smi_0600 69a4d11e262a488c121a4bb4cf767992 317 Pfam PF05448 Acetyl xylan esterase (AXE1) 1 307 6.2E-129 T 26-04-2016 IPR008391 Acetyl xylan esterase smi_0600 69a4d11e262a488c121a4bb4cf767992 317 Gene3D G3DSA:3.40.50.1820 1 307 4.4E-79 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold smi_0600 69a4d11e262a488c121a4bb4cf767992 317 SUPERFAMILY SSF53474 11 306 9.3E-39 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold smi_0964 2fb4186696c6aa6c2d17ccb6b4ab0fbe 266 PANTHER PTHR19370 13 254 3.9E-76 T 26-04-2016 smi_0964 2fb4186696c6aa6c2d17ccb6b4ab0fbe 266 SUPERFAMILY SSF52343 103 265 1.7E-34 T 26-04-2016 smi_0964 2fb4186696c6aa6c2d17ccb6b4ab0fbe 266 PIRSF PIRSF006816 12 266 1.7E-68 T 26-04-2016 IPR012165 Cytochrome-c3 hydrogenase, gamma subunit GO:0006221|GO:0050660|GO:0051537 UniPathway: UPA00070 smi_0964 2fb4186696c6aa6c2d17ccb6b4ab0fbe 266 Gene3D G3DSA:2.40.30.10 14 106 1.3E-31 T 26-04-2016 smi_0964 2fb4186696c6aa6c2d17ccb6b4ab0fbe 266 PRINTS PR00409 Phthalate dioxygenase reductase family signature 120 139 1.6E-5 T 26-04-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 smi_0964 2fb4186696c6aa6c2d17ccb6b4ab0fbe 266 PRINTS PR00409 Phthalate dioxygenase reductase family signature 36 46 1.6E-5 T 26-04-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 smi_0964 2fb4186696c6aa6c2d17ccb6b4ab0fbe 266 PRINTS PR00409 Phthalate dioxygenase reductase family signature 197 205 1.6E-5 T 26-04-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 smi_0964 2fb4186696c6aa6c2d17ccb6b4ab0fbe 266 Gene3D G3DSA:2.10.240.10 225 265 9.9E-18 T 26-04-2016 IPR019480 Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain UniPathway: UPA00070 smi_0964 2fb4186696c6aa6c2d17ccb6b4ab0fbe 266 Pfam PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B 225 264 2.0E-15 T 26-04-2016 IPR019480 Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain UniPathway: UPA00070 smi_0964 2fb4186696c6aa6c2d17ccb6b4ab0fbe 266 Gene3D G3DSA:3.40.50.80 114 217 9.7E-35 T 26-04-2016 smi_0964 2fb4186696c6aa6c2d17ccb6b4ab0fbe 266 Pfam PF00970 Oxidoreductase FAD-binding domain 18 106 3.2E-5 T 26-04-2016 IPR008333 Oxidoreductase, FAD-binding domain smi_0964 2fb4186696c6aa6c2d17ccb6b4ab0fbe 266 Hamap MF_01211 Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit [pyrK]. 14 266 36.307 T 26-04-2016 IPR023455 Dihydroorotate dehydrogenase electron transfer subunit UniPathway: UPA00070 smi_0964 2fb4186696c6aa6c2d17ccb6b4ab0fbe 266 Pfam PF00175 Oxidoreductase NAD-binding domain 121 211 7.3E-5 T 26-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 smi_0964 2fb4186696c6aa6c2d17ccb6b4ab0fbe 266 PANTHER PTHR19370:SF68 13 254 3.9E-76 T 26-04-2016 smi_0964 2fb4186696c6aa6c2d17ccb6b4ab0fbe 266 SUPERFAMILY SSF63380 14 108 3.76E-23 T 26-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 smi_0869 fc897325358e5e2ffcde04691838c430 306 PANTHER PTHR10025 13 305 6.6E-169 T 26-04-2016 smi_0869 fc897325358e5e2ffcde04691838c430 306 ProSitePatterns PS00766 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 1. 96 121 - T 26-04-2016 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 smi_0869 fc897325358e5e2ffcde04691838c430 306 SUPERFAMILY SSF53223 22 142 2.01E-41 T 26-04-2016 smi_0869 fc897325358e5e2ffcde04691838c430 306 SUPERFAMILY SSF51735 143 301 1.05E-53 T 26-04-2016 IPR016040 NAD(P)-binding domain smi_0869 fc897325358e5e2ffcde04691838c430 306 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 25 141 7.6E-41 T 26-04-2016 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 smi_0869 fc897325358e5e2ffcde04691838c430 306 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 280 288 - T 26-04-2016 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 smi_0869 fc897325358e5e2ffcde04691838c430 306 Gene3D G3DSA:3.40.50.720 160 284 3.8E-53 T 26-04-2016 IPR016040 NAD(P)-binding domain smi_0869 fc897325358e5e2ffcde04691838c430 306 Gene3D G3DSA:3.40.192.10 27 159 2.8E-50 T 26-04-2016 smi_0869 fc897325358e5e2ffcde04691838c430 306 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 130 151 8.0E-86 T 26-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 smi_0869 fc897325358e5e2ffcde04691838c430 306 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 224 253 8.0E-86 T 26-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 smi_0869 fc897325358e5e2ffcde04691838c430 306 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 54 76 8.0E-86 T 26-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 smi_0869 fc897325358e5e2ffcde04691838c430 306 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 276 294 8.0E-86 T 26-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 smi_0869 fc897325358e5e2ffcde04691838c430 306 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 95 122 8.0E-86 T 26-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 smi_0869 fc897325358e5e2ffcde04691838c430 306 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 259 275 8.0E-86 T 26-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 smi_0869 fc897325358e5e2ffcde04691838c430 306 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 175 195 8.0E-86 T 26-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 smi_0869 fc897325358e5e2ffcde04691838c430 306 Hamap MF_01576 Bifunctional protein FolD [folD]. 23 303 39.101 T 26-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 smi_0869 fc897325358e5e2ffcde04691838c430 306 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 144 301 4.5E-71 T 26-04-2016 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 smi_1049 1247ee7aa64693a5141cc40b318c9c01 329 Pfam PF02733 Dak1 domain 19 326 4.6E-88 T 26-04-2016 IPR004006 DhaK domain GO:0004371|GO:0006071 smi_1049 1247ee7aa64693a5141cc40b318c9c01 329 TIGRFAM TIGR02362 dhaK1b: probable dihydroxyacetone kinase DhaK1b subunit 4 329 4.6E-146 T 26-04-2016 IPR012735 Dihydroxyacetone kinase DhaK, subunit 1b smi_1049 1247ee7aa64693a5141cc40b318c9c01 329 SUPERFAMILY SSF82549 12 329 1.49E-96 T 26-04-2016 smi_1049 1247ee7aa64693a5141cc40b318c9c01 329 Gene3D G3DSA:3.40.50.10440 12 181 2.2E-53 T 26-04-2016 smi_1049 1247ee7aa64693a5141cc40b318c9c01 329 PANTHER PTHR28629 1 329 7.1E-101 T 26-04-2016 smi_1049 1247ee7aa64693a5141cc40b318c9c01 329 Gene3D G3DSA:3.30.1180.20 184 329 2.2E-44 T 26-04-2016 smi_1440 2ee1a201b9fe1024c71d26e3b3909336 215 SUPERFAMILY SSF52540 4 209 1.61E-47 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1440 2ee1a201b9fe1024c71d26e3b3909336 215 ProSitePatterns PS00211 ABC transporters family signature. 132 146 - T 26-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 smi_1440 2ee1a201b9fe1024c71d26e3b3909336 215 Gene3D G3DSA:3.40.50.300 2 207 2.4E-51 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1440 2ee1a201b9fe1024c71d26e3b3909336 215 Pfam PF00005 ABC transporter 21 160 3.2E-29 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 smi_1440 2ee1a201b9fe1024c71d26e3b3909336 215 PANTHER PTHR24220:SF545 6 207 1.6E-69 T 26-04-2016 smi_1440 2ee1a201b9fe1024c71d26e3b3909336 215 SMART SM00382 29 207 4.9E-14 T 26-04-2016 IPR003593 AAA+ ATPase domain smi_1440 2ee1a201b9fe1024c71d26e3b3909336 215 PANTHER PTHR24220 6 207 1.6E-69 T 26-04-2016 smi_2019 e3e296a6e46faa2b508b9435d9d84350 560 Pfam PF01120 Alpha-L-fucosidase 46 319 2.3E-30 T 26-04-2016 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51 smi_2019 e3e296a6e46faa2b508b9435d9d84350 560 SUPERFAMILY SSF49785 334 439 5.95E-10 T 26-04-2016 IPR008979 Galactose-binding domain-like smi_2019 e3e296a6e46faa2b508b9435d9d84350 560 PANTHER PTHR10030 7 458 8.6E-173 T 26-04-2016 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51 smi_2019 e3e296a6e46faa2b508b9435d9d84350 560 SUPERFAMILY SSF51445 7 319 7.79E-80 T 26-04-2016 IPR017853 Glycoside hydrolase superfamily smi_2019 e3e296a6e46faa2b508b9435d9d84350 560 Gene3D G3DSA:3.20.20.80 6 319 2.6E-86 T 26-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 smi_2019 e3e296a6e46faa2b508b9435d9d84350 560 Gene3D G3DSA:2.60.120.260 341 453 1.1E-8 T 26-04-2016 IPR008979 Galactose-binding domain-like smi_2019 e3e296a6e46faa2b508b9435d9d84350 560 SMART SM00812 9 333 1.0E-10 T 26-04-2016 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51 smi_2019 e3e296a6e46faa2b508b9435d9d84350 560 PANTHER PTHR10030:SF25 7 458 8.6E-173 T 26-04-2016 smi_1204 64615e1c8a7403c55ddb7ca37aa6b902 246 SMART SM00382 30 217 3.8E-13 T 26-04-2016 IPR003593 AAA+ ATPase domain smi_1204 64615e1c8a7403c55ddb7ca37aa6b902 246 Pfam PF00005 ABC transporter 21 169 1.1E-34 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 smi_1204 64615e1c8a7403c55ddb7ca37aa6b902 246 SUPERFAMILY SSF52540 6 239 9.04E-79 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1204 64615e1c8a7403c55ddb7ca37aa6b902 246 PIRSF PIRSF039085 2 245 1.4E-111 T 26-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 smi_1204 64615e1c8a7403c55ddb7ca37aa6b902 246 Gene3D G3DSA:3.40.50.300 6 241 8.9E-85 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1204 64615e1c8a7403c55ddb7ca37aa6b902 246 PANTHER PTHR24220 7 245 7.8E-137 T 26-04-2016 smi_1204 64615e1c8a7403c55ddb7ca37aa6b902 246 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 26-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 smi_1204 64615e1c8a7403c55ddb7ca37aa6b902 246 PANTHER PTHR24220:SF327 7 245 7.8E-137 T 26-04-2016 smi_1532 bb015fc4bd906ded7b1ee13b1c407568 494 Pfam PF08280 M protein trans-acting positive regulator (MGA) HTH domain 7 62 2.2E-15 T 26-04-2016 IPR013199 M protein trans-acting positive regulator (MGA) HTH domain smi_1532 bb015fc4bd906ded7b1ee13b1c407568 494 Pfam PF08270 M protein trans-acting positive regulator (MGA) PRD domain 174 391 8.8E-75 T 26-04-2016 IPR013236 M protein trans-acting positive regulator (MGA), PRD domain smi_1532 bb015fc4bd906ded7b1ee13b1c407568 494 PANTHER PTHR42275:SF1 1 494 1.6E-230 T 26-04-2016 smi_1532 bb015fc4bd906ded7b1ee13b1c407568 494 PANTHER PTHR42275 1 494 1.6E-230 T 26-04-2016 smi_1532 bb015fc4bd906ded7b1ee13b1c407568 494 Pfam PF05043 Mga helix-turn-helix domain 73 158 1.0E-21 T 26-04-2016 IPR007737 Mga helix-turn-helix domain smi_1532 bb015fc4bd906ded7b1ee13b1c407568 494 Gene3D G3DSA:1.10.10.10 7 58 4.3E-8 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain smi_0640 02e4cd8aff0187e97823585935c6a468 177 SMART SM00849 2 161 8.0E-23 T 26-04-2016 IPR001279 Metallo-beta-lactamase smi_0640 02e4cd8aff0187e97823585935c6a468 177 PANTHER PTHR11935 9 177 6.4E-47 T 26-04-2016 smi_0640 02e4cd8aff0187e97823585935c6a468 177 PANTHER PTHR11935:SF8 9 177 6.4E-47 T 26-04-2016 smi_0640 02e4cd8aff0187e97823585935c6a468 177 Pfam PF00753 Metallo-beta-lactamase superfamily 8 161 1.9E-23 T 26-04-2016 IPR001279 Metallo-beta-lactamase smi_0640 02e4cd8aff0187e97823585935c6a468 177 Gene3D G3DSA:3.60.15.10 10 177 4.9E-34 T 26-04-2016 IPR001279 Metallo-beta-lactamase smi_0640 02e4cd8aff0187e97823585935c6a468 177 SUPERFAMILY SSF56281 13 176 1.44E-35 T 26-04-2016 IPR001279 Metallo-beta-lactamase smi_1102 d5475f487ddacf367de4ffb0a764218b 158 Gene3D G3DSA:1.10.260.40 1 65 6.0E-19 T 26-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 smi_1102 d5475f487ddacf367de4ffb0a764218b 158 SMART SM00530 5 60 6.8E-13 T 26-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 smi_1102 d5475f487ddacf367de4ffb0a764218b 158 SUPERFAMILY SSF47413 2 64 2.09E-16 T 26-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 smi_1102 d5475f487ddacf367de4ffb0a764218b 158 Gene3D G3DSA:1.10.8.130 72 150 2.4E-4 T 26-04-2016 IPR015090 Bacterial epsilon antitoxin GO:0009636|GO:0015643|GO:0031342 smi_1102 d5475f487ddacf367de4ffb0a764218b 158 Pfam PF01381 Helix-turn-helix 6 58 1.1E-12 T 26-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 smi_1102 d5475f487ddacf367de4ffb0a764218b 158 PANTHER PTHR10245:SF55 1 157 8.8E-86 T 26-04-2016 smi_1102 d5475f487ddacf367de4ffb0a764218b 158 PANTHER PTHR10245 1 157 8.8E-86 T 26-04-2016 smi_1461 7434185af38137510a91f88770adf166 302 Pfam PF03466 LysR substrate binding domain 122 298 1.4E-10 T 26-04-2016 IPR005119 LysR, substrate-binding smi_1461 7434185af38137510a91f88770adf166 302 SUPERFAMILY SSF46785 1 88 1.28E-20 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain smi_1461 7434185af38137510a91f88770adf166 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 4.9E-8 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 smi_1461 7434185af38137510a91f88770adf166 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 4.9E-8 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 smi_1461 7434185af38137510a91f88770adf166 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 4.9E-8 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 smi_1461 7434185af38137510a91f88770adf166 302 Gene3D G3DSA:3.40.190.10 185 266 1.3E-6 T 26-04-2016 smi_1461 7434185af38137510a91f88770adf166 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 9.8E-18 T 26-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 smi_1461 7434185af38137510a91f88770adf166 302 Gene3D G3DSA:1.10.10.10 1 80 9.9E-25 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain smi_1461 7434185af38137510a91f88770adf166 302 PANTHER PTHR30346 1 299 6.6E-86 T 26-04-2016 smi_1461 7434185af38137510a91f88770adf166 302 PANTHER PTHR30346:SF0 1 299 6.6E-86 T 26-04-2016 smi_1461 7434185af38137510a91f88770adf166 302 Gene3D G3DSA:3.40.190.10 116 184 6.6E-4 T 26-04-2016 smi_1461 7434185af38137510a91f88770adf166 302 SUPERFAMILY SSF53850 101 297 2.53E-21 T 26-04-2016 smi_0310 9661342151027dc247f067a647c6dc7c 308 PANTHER PTHR12428 4 308 2.5E-144 T 26-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 smi_0310 9661342151027dc247f067a647c6dc7c 308 Hamap MF_01811 Membrane protein insertase YidC [yidC]. 4 253 27.065 T 26-04-2016 IPR023060 Membrane insertase YidC/YidC1/YidC2, Firmicutes smi_0310 9661342151027dc247f067a647c6dc7c 308 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 60 249 1.2E-38 T 26-04-2016 IPR028055 Membrane insertase YidC/Oxa1, C-terminal smi_0310 9661342151027dc247f067a647c6dc7c 308 PANTHER PTHR12428:SF20 4 308 2.5E-144 T 26-04-2016 smi_0310 9661342151027dc247f067a647c6dc7c 308 Pfam PF02096 60Kd inner membrane protein 60 249 3.5E-33 T 26-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 smi_0300 4ed5ab28cdd00bc907c20659ef2a2230 313 Pfam PF01966 HD domain 160 278 3.1E-5 T 26-04-2016 IPR006674 HD domain smi_0300 4ed5ab28cdd00bc907c20659ef2a2230 313 PANTHER PTHR37294:SF1 1 313 2.5E-124 T 26-04-2016 smi_0300 4ed5ab28cdd00bc907c20659ef2a2230 313 SUPERFAMILY SSF109604 143 280 7.68E-11 T 26-04-2016 smi_0300 4ed5ab28cdd00bc907c20659ef2a2230 313 Gene3D G3DSA:1.10.3210.10 159 279 1.1E-5 T 26-04-2016 IPR006674 HD domain smi_0300 4ed5ab28cdd00bc907c20659ef2a2230 313 PANTHER PTHR37294 1 313 2.5E-124 T 26-04-2016 smi_0300 4ed5ab28cdd00bc907c20659ef2a2230 313 Gene3D G3DSA:2.40.50.140 19 92 2.8E-4 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold smi_1165 1d268d00aeffa50b43c05a3e66dcd40f 380 ProSitePatterns PS00809 ADP-glucose pyrophosphorylase signature 2. 98 106 - T 26-04-2016 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|UniPathway: UPA00164 smi_1165 1d268d00aeffa50b43c05a3e66dcd40f 380 ProSitePatterns PS00810 ADP-glucose pyrophosphorylase signature 3. 189 199 - T 26-04-2016 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|UniPathway: UPA00164 smi_1165 1d268d00aeffa50b43c05a3e66dcd40f 380 SUPERFAMILY SSF51161 268 360 7.38E-13 T 26-04-2016 IPR011004 Trimeric LpxA-like smi_1165 1d268d00aeffa50b43c05a3e66dcd40f 380 TIGRFAM TIGR02091 glgC: glucose-1-phosphate adenylyltransferase 5 359 7.4E-146 T 26-04-2016 IPR011831 Glucose-1-phosphate adenylyltransferase GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|UniPathway: UPA00164 smi_1165 1d268d00aeffa50b43c05a3e66dcd40f 380 SUPERFAMILY SSF53448 340 354 1.05E-83 T 26-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases smi_1165 1d268d00aeffa50b43c05a3e66dcd40f 380 SUPERFAMILY SSF53448 2 262 1.05E-83 T 26-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases smi_1165 1d268d00aeffa50b43c05a3e66dcd40f 380 Hamap MF_00624 Glucose-1-phosphate adenylyltransferase [glgC]. 2 373 47.652 T 26-04-2016 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|UniPathway: UPA00164 smi_1165 1d268d00aeffa50b43c05a3e66dcd40f 380 PANTHER PTHR22572 6 364 1.5E-167 T 26-04-2016 smi_1165 1d268d00aeffa50b43c05a3e66dcd40f 380 Pfam PF00483 Nucleotidyl transferase 7 258 5.0E-66 T 26-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 smi_1165 1d268d00aeffa50b43c05a3e66dcd40f 380 PANTHER PTHR22572:SF10 6 364 1.5E-167 T 26-04-2016 smi_1165 1d268d00aeffa50b43c05a3e66dcd40f 380 ProSitePatterns PS00808 ADP-glucose pyrophosphorylase signature 1. 11 30 - T 26-04-2016 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|UniPathway: UPA00164 smi_1165 1d268d00aeffa50b43c05a3e66dcd40f 380 Gene3D G3DSA:3.90.550.10 4 269 5.3E-87 T 26-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases smi_1165 1d268d00aeffa50b43c05a3e66dcd40f 380 Gene3D G3DSA:3.90.550.10 306 349 5.3E-87 T 26-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases smi_0775 dc13e095bd70fb570cde5ce2fad9542f 312 Gene3D G3DSA:3.30.1060.10 2 151 2.3E-59 T 26-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 smi_0775 dc13e095bd70fb570cde5ce2fad9542f 312 Gene3D G3DSA:2.170.150.20 164 307 1.0E-56 T 26-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 smi_0775 dc13e095bd70fb570cde5ce2fad9542f 312 SUPERFAMILY SSF51316 169 308 1.31E-55 T 26-04-2016 IPR011057 Mss4-like smi_0775 dc13e095bd70fb570cde5ce2fad9542f 312 PANTHER PTHR10173 1 144 4.5E-116 T 26-04-2016 IPR028427 Peptide methionine sulfoxide reductase GO:0006979|GO:0016671|GO:0030091 smi_0775 dc13e095bd70fb570cde5ce2fad9542f 312 PANTHER PTHR10173 273 312 4.5E-116 T 26-04-2016 IPR028427 Peptide methionine sulfoxide reductase GO:0006979|GO:0016671|GO:0030091 smi_0775 dc13e095bd70fb570cde5ce2fad9542f 312 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 3 150 3.2E-46 T 26-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 smi_0775 dc13e095bd70fb570cde5ce2fad9542f 312 Pfam PF01625 Peptide methionine sulfoxide reductase 3 151 8.0E-55 T 26-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 smi_0775 dc13e095bd70fb570cde5ce2fad9542f 312 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 169 303 1.8E-61 T 26-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 smi_0775 dc13e095bd70fb570cde5ce2fad9542f 312 PANTHER PTHR10173:SF40 1 144 4.5E-116 T 26-04-2016 smi_0775 dc13e095bd70fb570cde5ce2fad9542f 312 PANTHER PTHR10173:SF40 273 312 4.5E-116 T 26-04-2016 smi_0775 dc13e095bd70fb570cde5ce2fad9542f 312 Pfam PF01641 SelR domain 175 293 1.2E-45 T 26-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 smi_0775 dc13e095bd70fb570cde5ce2fad9542f 312 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 168 295 34.927 T 26-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 smi_0775 dc13e095bd70fb570cde5ce2fad9542f 312 SUPERFAMILY SSF55068 2 158 9.03E-58 T 26-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 smi_0775 dc13e095bd70fb570cde5ce2fad9542f 312 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 1 156 33.737 T 26-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 smi_1212 405372baf70d4a41357b06c6ea7d0a19 328 SUPERFAMILY SSF51412 7 316 6.54E-90 T 26-04-2016 smi_1212 405372baf70d4a41357b06c6ea7d0a19 328 SMART SM01240 6 328 5.1E-108 T 26-04-2016 smi_1212 405372baf70d4a41357b06c6ea7d0a19 328 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 166 178 - T 26-04-2016 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 Reactome: REACT_1698 smi_1212 405372baf70d4a41357b06c6ea7d0a19 328 PANTHER PTHR11911:SF97 171 316 1.5E-155 T 26-04-2016 smi_1212 405372baf70d4a41357b06c6ea7d0a19 328 PANTHER PTHR11911:SF97 10 153 1.5E-155 T 26-04-2016 smi_1212 405372baf70d4a41357b06c6ea7d0a19 328 Gene3D G3DSA:3.20.20.70 8 320 1.7E-85 T 26-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 smi_1212 405372baf70d4a41357b06c6ea7d0a19 328 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 9 313 1.2E-68 T 26-04-2016 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 Reactome: REACT_1698 smi_1212 405372baf70d4a41357b06c6ea7d0a19 328 PIRSF PIRSF036500 3 327 5.6E-190 T 26-04-2016 IPR005994 Guanosine monophosphate reductase, type2 GO:0003920|GO:0006163|GO:1902560 KEGG: 00230+1.7.1.7 smi_1212 405372baf70d4a41357b06c6ea7d0a19 328 PANTHER PTHR11911 171 316 1.5E-155 T 26-04-2016 smi_1212 405372baf70d4a41357b06c6ea7d0a19 328 PANTHER PTHR11911 10 153 1.5E-155 T 26-04-2016 smi_1212 405372baf70d4a41357b06c6ea7d0a19 328 Hamap MF_01511 GMP reductase [guaC]. 5 326 62.155 T 26-04-2016 IPR005994 Guanosine monophosphate reductase, type2 GO:0003920|GO:0006163|GO:1902560 KEGG: 00230+1.7.1.7 smi_1212 405372baf70d4a41357b06c6ea7d0a19 328 TIGRFAM TIGR01306 GMP_reduct_2: guanosine monophosphate reductase 7 325 7.2E-195 T 26-04-2016 IPR005994 Guanosine monophosphate reductase, type2 GO:0003920|GO:0006163|GO:1902560 KEGG: 00230+1.7.1.7 smi_0069 9772e01101750112c49f2495d1fc8868 340 Gene3D G3DSA:3.90.650.10 170 339 1.4E-62 T 26-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain smi_0069 9772e01101750112c49f2495d1fc8868 340 PANTHER PTHR10520 1 330 8.9E-194 T 26-04-2016 smi_0069 9772e01101750112c49f2495d1fc8868 340 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 6 331 3.1E-134 T 26-04-2016 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 smi_0069 9772e01101750112c49f2495d1fc8868 340 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 5 340 45.612 T 26-04-2016 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 smi_0069 9772e01101750112c49f2495d1fc8868 340 Pfam PF02769 AIR synthase related protein, C-terminal domain 176 339 1.5E-36 T 26-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain smi_0069 9772e01101750112c49f2495d1fc8868 340 Gene3D G3DSA:3.30.1330.10 20 169 3.9E-62 T 26-04-2016 IPR016188 PurM-like, N-terminal domain smi_0069 9772e01101750112c49f2495d1fc8868 340 SUPERFAMILY SSF55326 6 169 1.94E-48 T 26-04-2016 smi_0069 9772e01101750112c49f2495d1fc8868 340 SUPERFAMILY SSF56042 170 338 4.34E-54 T 26-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain smi_0069 9772e01101750112c49f2495d1fc8868 340 Pfam PF00586 AIR synthase related protein, N-terminal domain 62 162 2.9E-16 T 26-04-2016 IPR016188 PurM-like, N-terminal domain smi_2079 977d6a3ef3d918bfd9058cafe14f711c 880 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 172 196 1.6E-6 T 26-04-2016 IPR023908 xxxLxxG heptad repeat smi_2079 977d6a3ef3d918bfd9058cafe14f711c 880 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 253 280 1.1E-6 T 26-04-2016 IPR023908 xxxLxxG heptad repeat smi_2079 977d6a3ef3d918bfd9058cafe14f711c 880 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 596 622 3.7E-7 T 26-04-2016 IPR023908 xxxLxxG heptad repeat smi_2079 977d6a3ef3d918bfd9058cafe14f711c 880 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 553 580 8.7E-7 T 26-04-2016 IPR023908 xxxLxxG heptad repeat smi_2079 977d6a3ef3d918bfd9058cafe14f711c 880 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 576 601 1.4E-5 T 26-04-2016 IPR023908 xxxLxxG heptad repeat smi_2079 977d6a3ef3d918bfd9058cafe14f711c 880 PANTHER PTHR30294 3 244 4.2E-95 T 26-04-2016 smi_2079 977d6a3ef3d918bfd9058cafe14f711c 880 PANTHER PTHR30294 691 880 4.2E-95 T 26-04-2016 smi_2079 977d6a3ef3d918bfd9058cafe14f711c 880 TIGRFAM TIGR03062 pip_yhgE_Cterm: YhgE/Pip C-terminal domain 676 876 1.6E-61 T 26-04-2016 IPR017501 Phage infection protein, YhgE, C-terminal smi_2079 977d6a3ef3d918bfd9058cafe14f711c 880 SUPERFAMILY SSF58104 251 473 5.75E-6 T 26-04-2016 smi_2079 977d6a3ef3d918bfd9058cafe14f711c 880 TIGRFAM TIGR03061 pip_yhgE_Nterm: YhgE/Pip N-terminal domain 3 166 2.1E-62 T 26-04-2016 IPR017500 Phage infection protein, YhgE, N-terminal smi_2079 977d6a3ef3d918bfd9058cafe14f711c 880 SUPERFAMILY SSF58104 400 626 2.88E-5 T 26-04-2016 smi_2079 977d6a3ef3d918bfd9058cafe14f711c 880 PANTHER PTHR30294:SF25 3 244 4.2E-95 T 26-04-2016 smi_2079 977d6a3ef3d918bfd9058cafe14f711c 880 PANTHER PTHR30294:SF25 691 880 4.2E-95 T 26-04-2016 smi_2079 977d6a3ef3d918bfd9058cafe14f711c 880 Pfam PF12698 ABC-2 family transporter protein 21 199 5.9E-10 T 26-04-2016 smi_0551 925433e8d2481ada9eedf583f840659d 202 PANTHER PTHR34297 2 154 5.1E-66 T 26-04-2016 smi_0551 925433e8d2481ada9eedf583f840659d 202 Pfam PF03780 Asp23 family, cell envelope-related function 24 130 2.3E-30 T 26-04-2016 IPR005531 Alkaline shock protein Asp23 smi_0551 925433e8d2481ada9eedf583f840659d 202 PANTHER PTHR34297:SF1 2 154 5.1E-66 T 26-04-2016 smi_1758 4f91f67cde8df97ba429356af5e9bd82 659 Gene3D G3DSA:3.90.76.10 42 216 4.2E-39 T 26-04-2016 smi_1758 4f91f67cde8df97ba429356af5e9bd82 659 Gene3D G3DSA:3.40.190.10 217 341 7.1E-19 T 26-04-2016 smi_1758 4f91f67cde8df97ba429356af5e9bd82 659 PANTHER PTHR30290 405 632 8.8E-140 T 26-04-2016 smi_1758 4f91f67cde8df97ba429356af5e9bd82 659 PANTHER PTHR30290 1 312 8.8E-140 T 26-04-2016 smi_1758 4f91f67cde8df97ba429356af5e9bd82 659 PANTHER PTHR30290 331 389 8.8E-140 T 26-04-2016 smi_1758 4f91f67cde8df97ba429356af5e9bd82 659 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 76 519 2.6E-46 T 26-04-2016 IPR000914 Solute-binding protein family 5 domain smi_1758 4f91f67cde8df97ba429356af5e9bd82 659 Gene3D G3DSA:3.10.105.10 342 584 7.6E-30 T 26-04-2016 smi_1758 4f91f67cde8df97ba429356af5e9bd82 659 PANTHER PTHR30290:SF10 405 632 8.8E-140 T 26-04-2016 smi_1758 4f91f67cde8df97ba429356af5e9bd82 659 PANTHER PTHR30290:SF10 1 312 8.8E-140 T 26-04-2016 smi_1758 4f91f67cde8df97ba429356af5e9bd82 659 PANTHER PTHR30290:SF10 331 389 8.8E-140 T 26-04-2016 smi_1758 4f91f67cde8df97ba429356af5e9bd82 659 SUPERFAMILY SSF53850 26 587 5.97E-73 T 26-04-2016 smi_1758 4f91f67cde8df97ba429356af5e9bd82 659 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 81 103 - T 26-04-2016 IPR023765 Solute-binding protein family 5, conserved site smi_1358 a4eb616e5c3a5dcbb50655b0320a5fc3 303 PANTHER PTHR10584 1 301 8.0E-115 T 26-04-2016 smi_1358 a4eb616e5c3a5dcbb50655b0320a5fc3 303 PIRSF PIRSF000535 1 303 8.6E-86 T 26-04-2016 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 smi_1358 a4eb616e5c3a5dcbb50655b0320a5fc3 303 Pfam PF00294 pfkB family carbohydrate kinase 7 280 8.7E-52 T 26-04-2016 IPR011611 Carbohydrate kinase PfkB smi_1358 a4eb616e5c3a5dcbb50655b0320a5fc3 303 TIGRFAM TIGR03168 1-PFK: hexose kinase, 1-phosphofructokinase family 2 301 3.1E-109 T 26-04-2016 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 smi_1358 a4eb616e5c3a5dcbb50655b0320a5fc3 303 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 243 256 - T 26-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 smi_1358 a4eb616e5c3a5dcbb50655b0320a5fc3 303 TIGRFAM TIGR03828 pfkB: 1-phosphofructokinase 2 301 4.0E-111 T 26-04-2016 IPR022463 Fructose 1-phosphate kinase GO:0008662 KEGG: 00051+2.7.1.56 smi_1358 a4eb616e5c3a5dcbb50655b0320a5fc3 303 SUPERFAMILY SSF53613 1 282 7.33E-67 T 26-04-2016 IPR029056 Ribokinase-like smi_1358 a4eb616e5c3a5dcbb50655b0320a5fc3 303 Gene3D G3DSA:2.20.150.10 9 35 2.4E-5 T 26-04-2016 IPR023314 Tagatose-6-phosphate kinase/1-phosphofructokinase N-terminal domain KEGG: 00052+2.7.1.144|KEGG: 00710+2.7.1.14|MetaCyc: PWY-7077|MetaCyc: PWY-7395|UniPathway: UPA00704 smi_1358 a4eb616e5c3a5dcbb50655b0320a5fc3 303 Gene3D G3DSA:3.40.1190.20 36 302 3.9E-81 T 26-04-2016 IPR029056 Ribokinase-like smi_1358 a4eb616e5c3a5dcbb50655b0320a5fc3 303 PANTHER PTHR10584:SF170 1 301 8.0E-115 T 26-04-2016 smi_1224 8ad177512914863b988bc454327663d9 229 PANTHER PTHR22572:SF15 2 225 2.3E-27 T 26-04-2016 smi_1224 8ad177512914863b988bc454327663d9 229 SUPERFAMILY SSF53448 1 225 2.82E-42 T 26-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases smi_1224 8ad177512914863b988bc454327663d9 229 Gene3D G3DSA:3.90.550.10 1 227 1.3E-39 T 26-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases smi_1224 8ad177512914863b988bc454327663d9 229 PIRSF PIRSF037382 1 229 4.0E-111 T 26-04-2016 IPR017189 CTP:phosphocholine cytidylyltransferase smi_1224 8ad177512914863b988bc454327663d9 229 PANTHER PTHR22572 2 225 2.3E-27 T 26-04-2016 smi_1224 8ad177512914863b988bc454327663d9 229 Pfam PF12804 MobA-like NTP transferase domain 3 93 2.0E-12 T 26-04-2016 IPR025877 MobA-like NTP transferase smi_0923 f33940832848e8f5bed2abb7d57e1711 360 Gene3D G3DSA:3.40.50.300 200 351 8.8E-38 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0923 f33940832848e8f5bed2abb7d57e1711 360 SMART SM00490 242 323 3.7E-21 T 26-04-2016 IPR001650 Helicase, C-terminal smi_0923 f33940832848e8f5bed2abb7d57e1711 360 Pfam PF00270 DEAD/DEAH box helicase 22 187 7.0E-39 T 26-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 smi_0923 f33940832848e8f5bed2abb7d57e1711 360 SUPERFAMILY SSF52540 67 337 5.71E-57 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0923 f33940832848e8f5bed2abb7d57e1711 360 PANTHER PTHR24031:SF334 15 354 7.9E-121 T 26-04-2016 smi_0923 f33940832848e8f5bed2abb7d57e1711 360 Gene3D G3DSA:3.40.50.300 4 199 1.2E-51 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0923 f33940832848e8f5bed2abb7d57e1711 360 SMART SM00487 17 207 3.2E-43 T 26-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain smi_0923 f33940832848e8f5bed2abb7d57e1711 360 Pfam PF00271 Helicase conserved C-terminal domain 224 323 5.2E-20 T 26-04-2016 IPR001650 Helicase, C-terminal smi_0923 f33940832848e8f5bed2abb7d57e1711 360 PANTHER PTHR24031 15 354 7.9E-121 T 26-04-2016 smi_0479 0de8146ccee1d9b6d2f4270b3e059ea0 561 Pfam PF05598 Transposase domain (DUF772) 49 109 9.6E-10 T 26-04-2016 IPR008490 Transposase InsH, N-terminal smi_0479 0de8146ccee1d9b6d2f4270b3e059ea0 561 Pfam PF01609 Transposase DDE domain 266 513 1.9E-26 T 26-04-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 smi_0479 0de8146ccee1d9b6d2f4270b3e059ea0 561 PANTHER PTHR33408:SF1 1 516 1.1E-106 T 26-04-2016 smi_0479 0de8146ccee1d9b6d2f4270b3e059ea0 561 PANTHER PTHR33408 1 516 1.1E-106 T 26-04-2016 smi_1225 8e2b5f20d30594e98f9e7efac21744bf 292 SUPERFAMILY SSF103481 51 142 2.48E-11 T 26-04-2016 smi_1225 8e2b5f20d30594e98f9e7efac21744bf 292 SUPERFAMILY SSF103481 191 290 6.15E-11 T 26-04-2016 smi_1225 8e2b5f20d30594e98f9e7efac21744bf 292 PANTHER PTHR22911:SF37 1 292 2.1E-100 T 26-04-2016 smi_1225 8e2b5f20d30594e98f9e7efac21744bf 292 Pfam PF00892 EamA-like transporter family 6 141 5.6E-14 T 26-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 smi_1225 8e2b5f20d30594e98f9e7efac21744bf 292 Pfam PF00892 EamA-like transporter family 155 290 4.3E-12 T 26-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 smi_1225 8e2b5f20d30594e98f9e7efac21744bf 292 PANTHER PTHR22911 1 292 2.1E-100 T 26-04-2016 smi_1219 7eca19f5db26f1e141594aacb6385138 218 PANTHER PTHR35145 1 218 2.8E-132 T 26-04-2016 smi_1219 7eca19f5db26f1e141594aacb6385138 218 PANTHER PTHR35145:SF1 1 218 2.8E-132 T 26-04-2016 smi_1219 7eca19f5db26f1e141594aacb6385138 218 SUPERFAMILY SSF142906 101 218 3.4E-26 T 26-04-2016 smi_1219 7eca19f5db26f1e141594aacb6385138 218 Pfam PF04237 YjbR 114 214 7.7E-13 T 26-04-2016 IPR007351 Uncharacterised protein YjbR smi_1304 ea3e615d40db7ad3dc8c0ad44886b1f1 337 PANTHER PTHR30344 1 336 1.5E-114 T 26-04-2016 smi_1304 ea3e615d40db7ad3dc8c0ad44886b1f1 337 Gene3D G3DSA:2.130.10.10 2 336 5.7E-92 T 26-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 smi_1304 ea3e615d40db7ad3dc8c0ad44886b1f1 337 PANTHER PTHR30344:SF1 1 336 1.5E-114 T 26-04-2016 smi_1304 ea3e615d40db7ad3dc8c0ad44886b1f1 337 Pfam PF10282 Lactonase, 7-bladed beta-propeller 4 335 8.4E-116 T 26-04-2016 IPR019405 Lactonase, 7-bladed beta propeller KEGG: 00030+3.1.1.31|UniPathway: UPA00115 smi_1304 ea3e615d40db7ad3dc8c0ad44886b1f1 337 SUPERFAMILY SSF51004 10 337 3.14E-40 T 26-04-2016 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain smi_1658 fba6b10ed6333b0af2fa635678cdbfec 814 SUPERFAMILY SSF53448 5 258 1.77E-54 T 26-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases smi_1658 fba6b10ed6333b0af2fa635678cdbfec 814 Pfam PF01501 Glycosyl transferase family 8 5 235 2.9E-31 T 26-04-2016 IPR002495 Glycosyl transferase, family 8 GO:0016757 smi_1658 fba6b10ed6333b0af2fa635678cdbfec 814 Gene3D G3DSA:3.90.550.10 5 256 9.5E-57 T 26-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases smi_1658 fba6b10ed6333b0af2fa635678cdbfec 814 TIGRFAM TIGR03728 glyco_access_1: glycosyltransferase, SP_1767 family 550 812 4.3E-115 T 26-04-2016 IPR014869 Domain of unknown function DUF1792 smi_1658 fba6b10ed6333b0af2fa635678cdbfec 814 Pfam PF08759 Domain of unknown function (DUF1792) 568 789 3.2E-87 T 26-04-2016 IPR014869 Domain of unknown function DUF1792 smi_0541 e0b741e427aa7bdbc3b82ca7f1d0d852 453 Gene3D G3DSA:3.60.120.10 7 448 1.9E-154 T 26-04-2016 IPR005801 ADC synthase GO:0009058 smi_0541 e0b741e427aa7bdbc3b82ca7f1d0d852 453 TIGRFAM TIGR00564 trpE_most: anthranilate synthase component I 8 448 4.1E-173 T 26-04-2016 IPR005256 Anthranilate synthase component I, PabB-like GO:0000162|GO:0004049 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 smi_0541 e0b741e427aa7bdbc3b82ca7f1d0d852 453 PRINTS PR00095 Anthranilate synthase component I signature 289 302 1.5E-23 T 26-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 smi_0541 e0b741e427aa7bdbc3b82ca7f1d0d852 453 PRINTS PR00095 Anthranilate synthase component I signature 383 397 1.5E-23 T 26-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 smi_0541 e0b741e427aa7bdbc3b82ca7f1d0d852 453 PRINTS PR00095 Anthranilate synthase component I signature 303 316 1.5E-23 T 26-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 smi_0541 e0b741e427aa7bdbc3b82ca7f1d0d852 453 PRINTS PR00095 Anthranilate synthase component I signature 398 412 1.5E-23 T 26-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 smi_0541 e0b741e427aa7bdbc3b82ca7f1d0d852 453 SUPERFAMILY SSF56322 4 448 6.28E-146 T 26-04-2016 IPR005801 ADC synthase GO:0009058 smi_0541 e0b741e427aa7bdbc3b82ca7f1d0d852 453 PANTHER PTHR11236:SF9 1 447 3.6E-218 T 26-04-2016 smi_0541 e0b741e427aa7bdbc3b82ca7f1d0d852 453 Pfam PF00425 chorismate binding enzyme 189 441 3.4E-93 T 26-04-2016 IPR015890 Chorismate-utilising enzyme, C-terminal smi_0541 e0b741e427aa7bdbc3b82ca7f1d0d852 453 Pfam PF04715 Anthranilate synthase component I, N terminal region 8 138 8.5E-29 T 26-04-2016 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058|GO:0016833 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 smi_0541 e0b741e427aa7bdbc3b82ca7f1d0d852 453 PANTHER PTHR11236 1 447 3.6E-218 T 26-04-2016 smi_1000 ef008cf009936e42fdcf95312d9ff84b 156 PANTHER PTHR34471:SF1 1 153 5.5E-37 T 26-04-2016 smi_1000 ef008cf009936e42fdcf95312d9ff84b 156 SUPERFAMILY SSF55252 79 147 1.57E-18 T 26-04-2016 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 UniPathway: UPA00068 smi_1000 ef008cf009936e42fdcf95312d9ff84b 156 PRINTS PR01467 Bacterial arginine repressor signature 88 101 6.8E-14 T 26-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 smi_1000 ef008cf009936e42fdcf95312d9ff84b 156 PRINTS PR01467 Bacterial arginine repressor signature 118 133 6.8E-14 T 26-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 smi_1000 ef008cf009936e42fdcf95312d9ff84b 156 PRINTS PR01467 Bacterial arginine repressor signature 22 35 6.8E-14 T 26-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 smi_1000 ef008cf009936e42fdcf95312d9ff84b 156 PRINTS PR01467 Bacterial arginine repressor signature 38 53 6.8E-14 T 26-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 smi_1000 ef008cf009936e42fdcf95312d9ff84b 156 PANTHER PTHR34471 1 153 5.5E-37 T 26-04-2016 smi_1000 ef008cf009936e42fdcf95312d9ff84b 156 Pfam PF02863 Arginine repressor, C-terminal domain 81 147 2.5E-18 T 26-04-2016 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 UniPathway: UPA00068 smi_1000 ef008cf009936e42fdcf95312d9ff84b 156 Gene3D G3DSA:3.30.1360.40 72 148 1.2E-22 T 26-04-2016 IPR024946 Arginine repressor C-terminal-like domain smi_1000 ef008cf009936e42fdcf95312d9ff84b 156 Pfam PF01316 Arginine repressor, DNA binding domain 5 65 2.3E-21 T 26-04-2016 IPR020900 Arginine repressor, DNA-binding domain GO:0003700|GO:0006355|GO:0006525 UniPathway: UPA00068 smi_1000 ef008cf009936e42fdcf95312d9ff84b 156 ProDom PD007402 ARGININE REPRESSOR TRANSCRIPTION BIOSYNTHESIS DNA-BINDING REGULATION AMINO-ACID ARGR TRANSCRIPTIONAL FAMILY 91 126 2.0E-10 T 26-04-2016 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 UniPathway: UPA00068 smi_1000 ef008cf009936e42fdcf95312d9ff84b 156 Hamap MF_00173 Arginine repressor [argR]. 1 152 49.392 T 26-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 smi_1000 ef008cf009936e42fdcf95312d9ff84b 156 SUPERFAMILY SSF46785 2 64 1.8E-16 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain smi_1000 ef008cf009936e42fdcf95312d9ff84b 156 Gene3D G3DSA:1.10.10.10 10 64 3.7E-21 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain smi_0991 a2d899059fb53cd116a09daacaaf79d8 586 Gene3D G3DSA:3.90.980.10 111 238 3.1E-37 T 26-04-2016 IPR013264 DNA primase, catalytic core, N-terminal smi_0991 a2d899059fb53cd116a09daacaaf79d8 586 SMART SM00400 33 87 2.5E-33 T 26-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 smi_0991 a2d899059fb53cd116a09daacaaf79d8 586 PANTHER PTHR30313 1 556 3.5E-134 T 26-04-2016 smi_0991 a2d899059fb53cd116a09daacaaf79d8 586 TIGRFAM TIGR01391 dnaG: DNA primase 1 411 6.7E-137 T 26-04-2016 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 smi_0991 a2d899059fb53cd116a09daacaaf79d8 586 Hamap MF_00974 DNA primase [dnaG]. 1 579 26.422 T 26-04-2016 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 smi_0991 a2d899059fb53cd116a09daacaaf79d8 586 Gene3D G3DSA:3.40.1360.10 239 358 2.1E-40 T 26-04-2016 smi_0991 a2d899059fb53cd116a09daacaaf79d8 586 SMART SM00493 257 328 2.6E-18 T 26-04-2016 IPR006171 Toprim domain smi_0991 a2d899059fb53cd116a09daacaaf79d8 586 Pfam PF13662 Toprim domain 257 327 4.1E-17 T 26-04-2016 IPR006171 Toprim domain smi_0991 a2d899059fb53cd116a09daacaaf79d8 586 SUPERFAMILY SSF56731 111 419 7.41E-90 T 26-04-2016 smi_0991 a2d899059fb53cd116a09daacaaf79d8 586 Gene3D G3DSA:3.90.580.10 2 96 1.7E-38 T 26-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 smi_0991 a2d899059fb53cd116a09daacaaf79d8 586 Pfam PF08275 DNA primase catalytic core, N-terminal domain 124 250 1.0E-33 T 26-04-2016 IPR013264 DNA primase, catalytic core, N-terminal smi_0991 a2d899059fb53cd116a09daacaaf79d8 586 Pfam PF01807 CHC2 zinc finger 3 96 1.6E-36 T 26-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 smi_0991 a2d899059fb53cd116a09daacaaf79d8 586 SUPERFAMILY SSF57783 1 97 4.59E-35 T 26-04-2016 smi_0991 a2d899059fb53cd116a09daacaaf79d8 586 PIRSF PIRSF002811 1 586 3.9E-168 T 26-04-2016 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 smi_0136 8f12aeb601b0c1f5337c02db11a26db5 282 SUPERFAMILY SSF53335 20 253 9.73E-31 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase smi_0136 8f12aeb601b0c1f5337c02db11a26db5 282 PANTHER PTHR10108:SF886 36 281 1.5E-91 T 26-04-2016 smi_0136 8f12aeb601b0c1f5337c02db11a26db5 282 PIRSF PIRSF018249 8 282 4.7E-91 T 26-04-2016 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted GO:0008168 smi_0136 8f12aeb601b0c1f5337c02db11a26db5 282 PANTHER PTHR10108 36 281 1.5E-91 T 26-04-2016 smi_0136 8f12aeb601b0c1f5337c02db11a26db5 282 Pfam PF13847 Methyltransferase domain 94 219 3.8E-12 T 26-04-2016 IPR025714 Methyltransferase domain smi_0136 8f12aeb601b0c1f5337c02db11a26db5 282 Gene3D G3DSA:3.40.50.150 61 226 4.6E-20 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase smi_1565 3311f86a1d5751535d63457518f47592 225 Gene3D G3DSA:1.10.10.630 120 197 1.6E-30 T 26-04-2016 IPR006343 Replication protein, DnaD/DnaB domain smi_1565 3311f86a1d5751535d63457518f47592 225 PANTHER PTHR41274 1 225 9.3E-86 T 26-04-2016 smi_1565 3311f86a1d5751535d63457518f47592 225 Pfam PF07261 Replication initiation and membrane attachment 127 198 1.2E-23 T 26-04-2016 IPR006343 Replication protein, DnaD/DnaB domain smi_1565 3311f86a1d5751535d63457518f47592 225 SUPERFAMILY SSF158499 125 191 1.83E-19 T 26-04-2016 IPR006343 Replication protein, DnaD/DnaB domain smi_1565 3311f86a1d5751535d63457518f47592 225 TIGRFAM TIGR01446 DnaD_dom: DnaD domain protein 125 197 4.2E-28 T 26-04-2016 IPR006343 Replication protein, DnaD/DnaB domain smi_1565 3311f86a1d5751535d63457518f47592 225 Gene3D G3DSA:1.10.10.10 41 81 1.8E-4 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain smi_1565 3311f86a1d5751535d63457518f47592 225 SUPERFAMILY SSF46785 34 117 3.6E-5 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain smi_0048 59a877ebb34fbc4c49a884c56d44c935 877 SMART SM00474 302 465 2.5E-29 T 26-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 smi_0048 59a877ebb34fbc4c49a884c56d44c935 877 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 5 175 1.3E-49 T 26-04-2016 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 smi_0048 59a877ebb34fbc4c49a884c56d44c935 877 PRINTS PR00868 DNA-polymerase family A (pol I) signature 703 728 1.08E-79 T 26-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 smi_0048 59a877ebb34fbc4c49a884c56d44c935 877 PRINTS PR00868 DNA-polymerase family A (pol I) signature 794 810 1.08E-79 T 26-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 smi_0048 59a877ebb34fbc4c49a884c56d44c935 877 PRINTS PR00868 DNA-polymerase family A (pol I) signature 602 624 1.08E-79 T 26-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 smi_0048 59a877ebb34fbc4c49a884c56d44c935 877 PRINTS PR00868 DNA-polymerase family A (pol I) signature 648 671 1.08E-79 T 26-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 smi_0048 59a877ebb34fbc4c49a884c56d44c935 877 PRINTS PR00868 DNA-polymerase family A (pol I) signature 740 751 1.08E-79 T 26-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 smi_0048 59a877ebb34fbc4c49a884c56d44c935 877 PRINTS PR00868 DNA-polymerase family A (pol I) signature 824 837 1.08E-79 T 26-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 smi_0048 59a877ebb34fbc4c49a884c56d44c935 877 PRINTS PR00868 DNA-polymerase family A (pol I) signature 678 691 1.08E-79 T 26-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 smi_0048 59a877ebb34fbc4c49a884c56d44c935 877 PRINTS PR00868 DNA-polymerase family A (pol I) signature 762 773 1.08E-79 T 26-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 smi_0048 59a877ebb34fbc4c49a884c56d44c935 877 PRINTS PR00868 DNA-polymerase family A (pol I) signature 625 640 1.08E-79 T 26-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 smi_0048 59a877ebb34fbc4c49a884c56d44c935 877 SMART SM00482 633 841 2.3E-117 T 26-04-2016 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 smi_0048 59a877ebb34fbc4c49a884c56d44c935 877 Gene3D G3DSA:3.40.50.1010 4 190 4.4E-68 T 26-04-2016 IPR029060 PIN domain-like smi_0048 59a877ebb34fbc4c49a884c56d44c935 877 Gene3D G3DSA:1.10.150.20 660 766 3.5E-39 T 26-04-2016 smi_0048 59a877ebb34fbc4c49a884c56d44c935 877 SUPERFAMILY SSF56672 469 877 8.23E-149 T 26-04-2016 smi_0048 59a877ebb34fbc4c49a884c56d44c935 877 PANTHER PTHR10133 3 877 0.0 T 26-04-2016 smi_0048 59a877ebb34fbc4c49a884c56d44c935 877 Gene3D G3DSA:1.20.1060.10 491 609 5.6E-36 T 26-04-2016 smi_0048 59a877ebb34fbc4c49a884c56d44c935 877 Gene3D G3DSA:3.30.420.10 301 489 1.0E-51 T 26-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 smi_0048 59a877ebb34fbc4c49a884c56d44c935 877 PANTHER PTHR10133:SF27 3 877 0.0 T 26-04-2016 smi_0048 59a877ebb34fbc4c49a884c56d44c935 877 SUPERFAMILY SSF53098 302 467 4.86E-34 T 26-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 smi_0048 59a877ebb34fbc4c49a884c56d44c935 877 SMART SM00279 178 213 2.1E-15 T 26-04-2016 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 smi_0048 59a877ebb34fbc4c49a884c56d44c935 877 ProSitePatterns PS00447 DNA polymerase family A signature. 703 722 - T 26-04-2016 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 smi_0048 59a877ebb34fbc4c49a884c56d44c935 877 Pfam PF00476 DNA polymerase family A 497 875 5.8E-149 T 26-04-2016 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 smi_0048 59a877ebb34fbc4c49a884c56d44c935 877 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 176 270 2.0E-32 T 26-04-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 smi_0048 59a877ebb34fbc4c49a884c56d44c935 877 SUPERFAMILY SSF88723 3 175 3.19E-51 T 26-04-2016 IPR029060 PIN domain-like smi_0048 59a877ebb34fbc4c49a884c56d44c935 877 SUPERFAMILY SSF47807 176 291 2.84E-34 T 26-04-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 smi_0048 59a877ebb34fbc4c49a884c56d44c935 877 Gene3D G3DSA:1.10.150.20 191 251 2.7E-30 T 26-04-2016 smi_0048 59a877ebb34fbc4c49a884c56d44c935 877 Gene3D G3DSA:3.30.70.370 767 877 2.4E-61 T 26-04-2016 smi_0048 59a877ebb34fbc4c49a884c56d44c935 877 Gene3D G3DSA:3.30.70.370 610 659 2.4E-61 T 26-04-2016 smi_0048 59a877ebb34fbc4c49a884c56d44c935 877 SMART SM00475 4 267 5.5E-152 T 26-04-2016 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 smi_0048 59a877ebb34fbc4c49a884c56d44c935 877 TIGRFAM TIGR00593 pola: DNA polymerase I 6 877 0.0 T 26-04-2016 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 smi_1487 d29b83ddcbd4719853fb26538658f725 187 Pfam PF00578 AhpC/TSA family 48 167 1.7E-20 T 26-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 smi_1487 d29b83ddcbd4719853fb26538658f725 187 Gene3D G3DSA:3.40.30.10 1 186 1.7E-44 T 26-04-2016 IPR012336 Thioredoxin-like fold smi_1487 d29b83ddcbd4719853fb26538658f725 187 PANTHER PTHR10681 25 186 8.8E-27 T 26-04-2016 smi_1487 d29b83ddcbd4719853fb26538658f725 187 SUPERFAMILY SSF52833 1 185 3.05E-35 T 26-04-2016 IPR012336 Thioredoxin-like fold smi_1487 d29b83ddcbd4719853fb26538658f725 187 PANTHER PTHR10681:SF68 25 186 8.8E-27 T 26-04-2016 smi_1183 4240a7525c746b3a3cacbe0b01c053ef 189 SMART SM01118 3 189 1.4E-20 T 26-04-2016 IPR023577 CYTH domain smi_1183 4240a7525c746b3a3cacbe0b01c053ef 189 Gene3D G3DSA:2.40.320.10 4 178 3.3E-15 T 26-04-2016 IPR023577 CYTH domain smi_1183 4240a7525c746b3a3cacbe0b01c053ef 189 SUPERFAMILY SSF55154 3 185 1.5E-27 T 26-04-2016 IPR033469 CYTH-like domain smi_1183 4240a7525c746b3a3cacbe0b01c053ef 189 PIRSF PIRSF012526 1 189 8.8E-76 T 26-04-2016 IPR009195 Uncharacterised protein family YjbK KEGG: 00230+3.6.1.-|KEGG: 00332+3.6.1.-|KEGG: 00790+3.6.1.- smi_1183 4240a7525c746b3a3cacbe0b01c053ef 189 Pfam PF01928 CYTH domain 4 182 1.8E-34 T 26-04-2016 IPR023577 CYTH domain smi_1183 4240a7525c746b3a3cacbe0b01c053ef 189 PANTHER PTHR41266 1 189 8.9E-83 T 26-04-2016 smi_0744 c9398d03b7c18dc34cc5fa6c73961ec6 268 SUPERFAMILY SSF161098 5 262 1.68E-50 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 smi_0744 c9398d03b7c18dc34cc5fa6c73961ec6 268 Gene3D G3DSA:1.10.3720.10 7 264 3.7E-47 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 smi_0744 c9398d03b7c18dc34cc5fa6c73961ec6 268 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 59 262 6.1E-11 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 smi_0744 c9398d03b7c18dc34cc5fa6c73961ec6 268 PANTHER PTHR30193 1 268 5.1E-109 T 26-04-2016 smi_0744 c9398d03b7c18dc34cc5fa6c73961ec6 268 PANTHER PTHR30193:SF10 1 268 5.1E-109 T 26-04-2016 smi_1896 6401c64aa6a90c9fe4ce4c56651f67b4 86 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 5 77 7.0E-36 T 26-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_1896 6401c64aa6a90c9fe4ce4c56651f67b4 86 Gene3D G3DSA:2.40.50.140 6 83 1.3E-34 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold smi_1896 6401c64aa6a90c9fe4ce4c56651f67b4 86 PRINTS PR00973 Ribosomal protein S17 family signature 67 74 1.6E-11 T 26-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_1896 6401c64aa6a90c9fe4ce4c56651f67b4 86 PRINTS PR00973 Ribosomal protein S17 family signature 57 67 1.6E-11 T 26-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_1896 6401c64aa6a90c9fe4ce4c56651f67b4 86 PRINTS PR00973 Ribosomal protein S17 family signature 25 48 1.6E-11 T 26-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_1896 6401c64aa6a90c9fe4ce4c56651f67b4 86 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 6 77 5.1E-35 T 26-04-2016 IPR019984 Ribosomal protein S17, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_1896 6401c64aa6a90c9fe4ce4c56651f67b4 86 ProSitePatterns PS00056 Ribosomal protein S17 signature. 57 69 - T 26-04-2016 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_1896 6401c64aa6a90c9fe4ce4c56651f67b4 86 SUPERFAMILY SSF50249 6 83 4.71E-32 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold smi_1896 6401c64aa6a90c9fe4ce4c56651f67b4 86 PANTHER PTHR10744 3 85 4.5E-40 T 26-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_1896 6401c64aa6a90c9fe4ce4c56651f67b4 86 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 4 82 24.415 T 26-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_1896 6401c64aa6a90c9fe4ce4c56651f67b4 86 Pfam PF00366 Ribosomal protein S17 11 78 1.5E-32 T 26-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_1027 492d99908ef3405d18c20d44c76b2578 171 TIGRFAM TIGR00689 rpiB_lacA_lacB: sugar-phosphate isomerase, RpiB/LacA/LacB family 3 145 1.4E-35 T 26-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 smi_1027 492d99908ef3405d18c20d44c76b2578 171 TIGRFAM TIGR01119 lacB: galactose-6-phosphate isomerase, LacB subunit 1 171 3.1E-109 T 26-04-2016 IPR004784 Galactose-6-phosphate isomerase subunit LacB GO:0005990|GO:0016861|GO:0050044 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 smi_1027 492d99908ef3405d18c20d44c76b2578 171 SUPERFAMILY SSF89623 1 151 9.55E-49 T 26-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 smi_1027 492d99908ef3405d18c20d44c76b2578 171 PANTHER PTHR30345:SF4 1 171 1.3E-142 T 26-04-2016 smi_1027 492d99908ef3405d18c20d44c76b2578 171 Gene3D G3DSA:3.40.1400.10 1 155 2.3E-53 T 26-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 smi_1027 492d99908ef3405d18c20d44c76b2578 171 Hamap MF_01556 Galactose-6-phosphate isomerase subunit LacB [lacB]. 1 171 51.469 T 26-04-2016 IPR004784 Galactose-6-phosphate isomerase subunit LacB GO:0005990|GO:0016861|GO:0050044 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 smi_1027 492d99908ef3405d18c20d44c76b2578 171 PANTHER PTHR30345 1 171 1.3E-142 T 26-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 smi_1027 492d99908ef3405d18c20d44c76b2578 171 PIRSF PIRSF005384 1 148 1.9E-49 T 26-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 smi_1027 492d99908ef3405d18c20d44c76b2578 171 Pfam PF02502 Ribose/Galactose Isomerase 3 141 1.4E-41 T 26-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 smi_1007 8828d6930375f059179ee6164db1709b 822 Gene3D G3DSA:3.30.1360.40 234 330 1.5E-36 T 26-04-2016 IPR024946 Arginine repressor C-terminal-like domain smi_1007 8828d6930375f059179ee6164db1709b 822 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 6 804 0.0 T 26-04-2016 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 smi_1007 8828d6930375f059179ee6164db1709b 822 SMART SM00434 9 462 2.8E-288 T 26-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 smi_1007 8828d6930375f059179ee6164db1709b 822 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 502 547 1.3E-8 T 26-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 smi_1007 8828d6930375f059179ee6164db1709b 822 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 758 803 8.3E-11 T 26-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 smi_1007 8828d6930375f059179ee6164db1709b 822 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 658 703 4.1E-12 T 26-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 smi_1007 8828d6930375f059179ee6164db1709b 822 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 552 601 6.2E-12 T 26-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 smi_1007 8828d6930375f059179ee6164db1709b 822 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 610 653 1.2E-9 T 26-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 smi_1007 8828d6930375f059179ee6164db1709b 822 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 707 754 2.2E-10 T 26-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 smi_1007 8828d6930375f059179ee6164db1709b 822 Gene3D G3DSA:3.90.199.10 29 233 8.0E-122 T 26-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 smi_1007 8828d6930375f059179ee6164db1709b 822 Gene3D G3DSA:3.90.199.10 331 396 8.0E-122 T 26-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 smi_1007 8828d6930375f059179ee6164db1709b 822 PANTHER PTHR10169 2 774 0.0 T 26-04-2016 smi_1007 8828d6930375f059179ee6164db1709b 822 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 30 470 3.9E-159 T 26-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 smi_1007 8828d6930375f059179ee6164db1709b 822 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 1 808 29.572 T 26-04-2016 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 smi_1007 8828d6930375f059179ee6164db1709b 822 PANTHER PTHR10169:SF48 2 774 0.0 T 26-04-2016 smi_1007 8828d6930375f059179ee6164db1709b 822 SUPERFAMILY SSF56719 29 484 1.19E-179 T 26-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 smi_1007 8828d6930375f059179ee6164db1709b 822 Gene3D G3DSA:2.120.10.90 494 804 7.4E-122 T 26-04-2016 smi_1007 8828d6930375f059179ee6164db1709b 822 SUPERFAMILY SSF101904 497 817 1.83E-104 T 26-04-2016 smi_1391 33a41a741f7d9d7428b1fba43f7aed46 307 PIRSF PIRSF006268 1 306 4.9E-91 T 26-04-2016 IPR024932 Flavin transferase ApbE GO:0017013 smi_1391 33a41a741f7d9d7428b1fba43f7aed46 307 PANTHER PTHR30040:SF2 5 304 1.3E-111 T 26-04-2016 IPR024932 Flavin transferase ApbE GO:0017013 smi_1391 33a41a741f7d9d7428b1fba43f7aed46 307 SUPERFAMILY SSF143631 5 305 2.88E-83 T 26-04-2016 IPR003374 ApbE-like domain smi_1391 33a41a741f7d9d7428b1fba43f7aed46 307 PANTHER PTHR30040 5 304 1.3E-111 T 26-04-2016 smi_1391 33a41a741f7d9d7428b1fba43f7aed46 307 Pfam PF02424 ApbE family 11 290 1.1E-69 T 26-04-2016 IPR024932 Flavin transferase ApbE GO:0017013 smi_0578 919f22f6f1e5a4e6d3c675586a721542 515 Gene3D G3DSA:1.20.1560.10 8 299 2.0E-21 T 26-04-2016 smi_0578 919f22f6f1e5a4e6d3c675586a721542 515 SUPERFAMILY SSF90123 8 286 1.57E-30 T 26-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 smi_0578 919f22f6f1e5a4e6d3c675586a721542 515 SMART SM00382 341 515 1.9E-11 T 26-04-2016 IPR003593 AAA+ ATPase domain smi_0578 919f22f6f1e5a4e6d3c675586a721542 515 SUPERFAMILY SSF52540 317 513 1.41E-42 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0578 919f22f6f1e5a4e6d3c675586a721542 515 Gene3D G3DSA:3.40.50.300 317 513 4.4E-43 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0578 919f22f6f1e5a4e6d3c675586a721542 515 PANTHER PTHR24220 318 486 4.4E-45 T 26-04-2016 smi_0578 919f22f6f1e5a4e6d3c675586a721542 515 Pfam PF00005 ABC transporter 333 466 9.8E-32 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 smi_0578 919f22f6f1e5a4e6d3c675586a721542 515 ProSitePatterns PS00211 ABC transporters family signature. 441 455 - T 26-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 smi_0578 919f22f6f1e5a4e6d3c675586a721542 515 Pfam PF00664 ABC transporter transmembrane region 101 262 8.2E-10 T 26-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 smi_0990 252e09cb1bdb197009e9c772356cb64e 252 SUPERFAMILY SSF52540 4 238 3.76E-52 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0990 252e09cb1bdb197009e9c772356cb64e 252 Gene3D G3DSA:3.40.50.300 3 247 1.9E-58 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0990 252e09cb1bdb197009e9c772356cb64e 252 Pfam PF00005 ABC transporter 25 180 2.1E-27 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 smi_0990 252e09cb1bdb197009e9c772356cb64e 252 PANTHER PTHR24220 6 252 6.8E-93 T 26-04-2016 smi_0990 252e09cb1bdb197009e9c772356cb64e 252 ProSitePatterns PS00211 ABC transporters family signature. 152 166 - T 26-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 smi_0990 252e09cb1bdb197009e9c772356cb64e 252 PANTHER PTHR24220:SF534 6 252 6.8E-93 T 26-04-2016 smi_0990 252e09cb1bdb197009e9c772356cb64e 252 SMART SM00382 34 229 1.0E-7 T 26-04-2016 IPR003593 AAA+ ATPase domain smi_0003 ce651cd38cd649e689aa983adbe015a0 82 Pfam PF06107 Bacterial protein of unknown function (DUF951) 20 81 4.5E-26 T 26-04-2016 IPR009296 Protein of unknown function DUF951 smi_0003 ce651cd38cd649e689aa983adbe015a0 82 PANTHER PTHR38455 17 82 3.5E-32 T 26-04-2016 smi_0003 ce651cd38cd649e689aa983adbe015a0 82 PIRSF PIRSF037263 15 82 6.4E-35 T 26-04-2016 IPR009296 Protein of unknown function DUF951 smi_0003 ce651cd38cd649e689aa983adbe015a0 82 PANTHER PTHR38455:SF1 17 82 3.5E-32 T 26-04-2016 smi_1627 03f0da14077350f2d0c453be65702819 104 Gene3D G3DSA:3.90.940.10 2 84 5.8E-26 T 26-04-2016 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 smi_1627 03f0da14077350f2d0c453be65702819 104 Pfam PF01192 RNA polymerase Rpb6 10 61 6.0E-11 T 26-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 smi_1627 03f0da14077350f2d0c453be65702819 104 SUPERFAMILY SSF63562 2 82 2.09E-22 T 26-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 smi_1627 03f0da14077350f2d0c453be65702819 104 SMART SM01409 9 61 2.2E-11 T 26-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 smi_1627 03f0da14077350f2d0c453be65702819 104 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 2 59 8.0E-14 T 26-04-2016 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 smi_1627 03f0da14077350f2d0c453be65702819 104 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 2 62 13.944 T 26-04-2016 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 smi_1686 d66c3bdf7a85bdfe40a0617a2a01302c 261 PANTHER PTHR11941:SF76 1 258 1.8E-111 T 26-04-2016 smi_1686 d66c3bdf7a85bdfe40a0617a2a01302c 261 Gene3D G3DSA:3.90.226.10 1 259 4.5E-67 T 26-04-2016 IPR029045 ClpP/crotonase-like domain smi_1686 d66c3bdf7a85bdfe40a0617a2a01302c 261 SUPERFAMILY SSF52096 1 260 1.71E-66 T 26-04-2016 IPR029045 ClpP/crotonase-like domain smi_1686 d66c3bdf7a85bdfe40a0617a2a01302c 261 Pfam PF00378 Enoyl-CoA hydratase/isomerase 10 260 2.9E-48 T 26-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 smi_1686 d66c3bdf7a85bdfe40a0617a2a01302c 261 PANTHER PTHR11941 1 258 1.8E-111 T 26-04-2016 smi_1300 f79b2825b644d0ba0eb7c559f0e85a93 403 SUPERFAMILY SSF48452 5 87 4.1E-6 T 26-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 smi_1300 f79b2825b644d0ba0eb7c559f0e85a93 403 SMART SM00028 26 59 440.0 T 26-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 smi_1300 f79b2825b644d0ba0eb7c559f0e85a93 403 SMART SM00028 91 124 240.0 T 26-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 smi_1300 f79b2825b644d0ba0eb7c559f0e85a93 403 SMART SM00028 161 194 3.1E-4 T 26-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 smi_1300 f79b2825b644d0ba0eb7c559f0e85a93 403 SMART SM00028 195 227 150.0 T 26-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 smi_1300 f79b2825b644d0ba0eb7c559f0e85a93 403 Pfam PF13432 Tetratricopeptide repeat 30 84 0.0077 T 26-04-2016 smi_1300 f79b2825b644d0ba0eb7c559f0e85a93 403 Gene3D G3DSA:1.25.40.10 307 398 5.5E-7 T 26-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 smi_1300 f79b2825b644d0ba0eb7c559f0e85a93 403 Gene3D G3DSA:1.25.40.10 178 211 5.9E-6 T 26-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 smi_1300 f79b2825b644d0ba0eb7c559f0e85a93 403 PANTHER PTHR23083:SF412 5 403 1.7E-71 T 26-04-2016 smi_1300 f79b2825b644d0ba0eb7c559f0e85a93 403 SUPERFAMILY SSF48452 62 397 1.14E-19 T 26-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 smi_1300 f79b2825b644d0ba0eb7c559f0e85a93 403 Gene3D G3DSA:1.25.40.10 5 177 7.5E-19 T 26-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 smi_1300 f79b2825b644d0ba0eb7c559f0e85a93 403 PANTHER PTHR23083 5 403 1.7E-71 T 26-04-2016 smi_1300 f79b2825b644d0ba0eb7c559f0e85a93 403 Gene3D G3DSA:1.25.40.10 212 306 3.8E-14 T 26-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 smi_1300 f79b2825b644d0ba0eb7c559f0e85a93 403 Pfam PF13181 Tetratricopeptide repeat 162 193 2.3E-5 T 26-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 smi_1300 f79b2825b644d0ba0eb7c559f0e85a93 403 Pfam PF13181 Tetratricopeptide repeat 198 226 0.0093 T 26-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 smi_0376 32ef49e9d19785af89206cbbd797dd61 378 Gene3D G3DSA:3.30.300.20 198 289 1.2E-28 T 26-04-2016 IPR015946 K homology domain-like, alpha/beta smi_0376 32ef49e9d19785af89206cbbd797dd61 378 SUPERFAMILY SSF50249 132 198 3.72E-16 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold smi_0376 32ef49e9d19785af89206cbbd797dd61 378 SUPERFAMILY SSF54814 199 271 5.17E-22 T 26-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 smi_0376 32ef49e9d19785af89206cbbd797dd61 378 Gene3D G3DSA:3.30.1480.10 1 123 2.0E-40 T 26-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 smi_0376 32ef49e9d19785af89206cbbd797dd61 378 Pfam PF08529 NusA N-terminal domain 4 123 3.9E-32 T 26-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 smi_0376 32ef49e9d19785af89206cbbd797dd61 378 PANTHER PTHR22648:SF0 1 364 2.6E-144 T 26-04-2016 smi_0376 32ef49e9d19785af89206cbbd797dd61 378 SUPERFAMILY SSF54814 292 357 1.18E-16 T 26-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 smi_0376 32ef49e9d19785af89206cbbd797dd61 378 PANTHER PTHR22648 1 364 2.6E-144 T 26-04-2016 smi_0376 32ef49e9d19785af89206cbbd797dd61 378 SUPERFAMILY SSF69705 1 124 2.49E-36 T 26-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 smi_0376 32ef49e9d19785af89206cbbd797dd61 378 Gene3D G3DSA:2.40.50.140 128 197 4.7E-26 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold smi_0376 32ef49e9d19785af89206cbbd797dd61 378 SMART SM00322 315 373 1.1 T 26-04-2016 IPR004087 K Homology domain GO:0003676 smi_0376 32ef49e9d19785af89206cbbd797dd61 378 SMART SM00322 229 306 1.9 T 26-04-2016 IPR004087 K Homology domain GO:0003676 smi_0376 32ef49e9d19785af89206cbbd797dd61 378 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 2 375 26.833 T 26-04-2016 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 smi_0376 32ef49e9d19785af89206cbbd797dd61 378 Pfam PF13184 NusA-like KH domain 229 310 5.8E-29 T 26-04-2016 IPR025249 KH domain, NusA-like GO:0003723 smi_0376 32ef49e9d19785af89206cbbd797dd61 378 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 4 356 3.8E-112 T 26-04-2016 IPR010213 Transcription termination factor NusA GO:0003723 smi_0376 32ef49e9d19785af89206cbbd797dd61 378 Gene3D G3DSA:3.30.300.20 292 360 4.6E-32 T 26-04-2016 IPR015946 K homology domain-like, alpha/beta smi_1923 f853b7f7bd6832cd567727d0655e36f0 886 TIGRFAM TIGR01524 ATPase-IIIB_Mg: magnesium-translocating P-type ATPase 4 885 0.0 T 26-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 smi_1923 f853b7f7bd6832cd567727d0655e36f0 886 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 583 703 1.6E-26 T 26-04-2016 IPR001757 P-type ATPase GO:0016021 smi_1923 f853b7f7bd6832cd567727d0655e36f0 886 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 99 355 2.9E-33 T 26-04-2016 IPR001757 P-type ATPase GO:0016021 smi_1923 f853b7f7bd6832cd567727d0655e36f0 886 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 343 349 - T 26-04-2016 IPR018303 P-type ATPase, phosphorylation site smi_1923 f853b7f7bd6832cd567727d0655e36f0 886 Gene3D G3DSA:3.40.1110.10 333 521 7.6E-33 T 26-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 smi_1923 f853b7f7bd6832cd567727d0655e36f0 886 Gene3D G3DSA:2.70.150.10 27 63 2.4E-38 T 26-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 smi_1923 f853b7f7bd6832cd567727d0655e36f0 886 Gene3D G3DSA:2.70.150.10 125 241 2.4E-38 T 26-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 smi_1923 f853b7f7bd6832cd567727d0655e36f0 886 SUPERFAMILY SSF81653 131 240 2.88E-27 T 26-04-2016 smi_1923 f853b7f7bd6832cd567727d0655e36f0 886 Pfam PF00122 E1-E2 ATPase 97 332 8.0E-55 T 26-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 smi_1923 f853b7f7bd6832cd567727d0655e36f0 886 Pfam PF00689 Cation transporting ATPase, C-terminus 697 877 5.4E-16 T 26-04-2016 IPR006068 Cation-transporting P-type ATPase, C-terminal smi_1923 f853b7f7bd6832cd567727d0655e36f0 886 PANTHER PTHR24093:SF128 28 885 0.0 T 26-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 smi_1923 f853b7f7bd6832cd567727d0655e36f0 886 Pfam PF00702 haloacid dehalogenase-like hydrolase 337 628 3.8E-20 T 26-04-2016 smi_1923 f853b7f7bd6832cd567727d0655e36f0 886 PANTHER PTHR24093 28 885 0.0 T 26-04-2016 smi_1923 f853b7f7bd6832cd567727d0655e36f0 886 SUPERFAMILY SSF81665 242 335 2.22E-101 T 26-04-2016 smi_1923 f853b7f7bd6832cd567727d0655e36f0 886 SUPERFAMILY SSF81665 13 130 2.22E-101 T 26-04-2016 smi_1923 f853b7f7bd6832cd567727d0655e36f0 886 SUPERFAMILY SSF81665 663 882 2.22E-101 T 26-04-2016 smi_1923 f853b7f7bd6832cd567727d0655e36f0 886 PRINTS PR01836 Magnesium-transporting ATPase signature 690 701 5.3E-64 T 26-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 smi_1923 f853b7f7bd6832cd567727d0655e36f0 886 PRINTS PR01836 Magnesium-transporting ATPase signature 742 758 5.3E-64 T 26-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 smi_1923 f853b7f7bd6832cd567727d0655e36f0 886 PRINTS PR01836 Magnesium-transporting ATPase signature 722 735 5.3E-64 T 26-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 smi_1923 f853b7f7bd6832cd567727d0655e36f0 886 PRINTS PR01836 Magnesium-transporting ATPase signature 839 860 5.3E-64 T 26-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 smi_1923 f853b7f7bd6832cd567727d0655e36f0 886 PRINTS PR01836 Magnesium-transporting ATPase signature 254 270 5.3E-64 T 26-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 smi_1923 f853b7f7bd6832cd567727d0655e36f0 886 PRINTS PR01836 Magnesium-transporting ATPase signature 271 290 5.3E-64 T 26-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 smi_1923 f853b7f7bd6832cd567727d0655e36f0 886 PRINTS PR01836 Magnesium-transporting ATPase signature 375 388 5.3E-64 T 26-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 smi_1923 f853b7f7bd6832cd567727d0655e36f0 886 PRINTS PR01836 Magnesium-transporting ATPase signature 672 687 5.3E-64 T 26-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 smi_1923 f853b7f7bd6832cd567727d0655e36f0 886 PRINTS PR01836 Magnesium-transporting ATPase signature 789 810 5.3E-64 T 26-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 smi_1923 f853b7f7bd6832cd567727d0655e36f0 886 Pfam PF00690 Cation transporter/ATPase, N-terminus 15 78 3.9E-13 T 26-04-2016 IPR004014 Cation-transporting P-type ATPase, N-terminal smi_1923 f853b7f7bd6832cd567727d0655e36f0 886 SUPERFAMILY SSF56784 339 359 1.24E-39 T 26-04-2016 IPR023214 HAD-like domain smi_1923 f853b7f7bd6832cd567727d0655e36f0 886 SUPERFAMILY SSF56784 470 713 1.24E-39 T 26-04-2016 IPR023214 HAD-like domain smi_1923 f853b7f7bd6832cd567727d0655e36f0 886 Gene3D G3DSA:1.20.1110.10 64 124 3.1E-66 T 26-04-2016 IPR023298 P-type ATPase, transmembrane domain smi_1923 f853b7f7bd6832cd567727d0655e36f0 886 Gene3D G3DSA:1.20.1110.10 583 877 3.1E-66 T 26-04-2016 IPR023298 P-type ATPase, transmembrane domain smi_1923 f853b7f7bd6832cd567727d0655e36f0 886 SMART SM00831 10 83 3.1E-7 T 26-04-2016 IPR004014 Cation-transporting P-type ATPase, N-terminal smi_1561 b5769d61de553d29f4940ce2c100cea5 168 Pfam PF00186 Dihydrofolate reductase 4 163 4.4E-55 T 26-04-2016 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0006545|GO:0009165|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 smi_1561 b5769d61de553d29f4940ce2c100cea5 168 PANTHER PTHR22778:SF16 1 168 4.1E-34 T 26-04-2016 smi_1561 b5769d61de553d29f4940ce2c100cea5 168 PIRSF PIRSF000194 1 167 3.4E-50 T 26-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 smi_1561 b5769d61de553d29f4940ce2c100cea5 168 SUPERFAMILY SSF53597 1 166 1.96E-51 T 26-04-2016 IPR024072 Dihydrofolate reductase-like domain smi_1561 b5769d61de553d29f4940ce2c100cea5 168 PRINTS PR00070 Dihydrofolate reductase signature 30 38 2.3E-12 T 26-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 smi_1561 b5769d61de553d29f4940ce2c100cea5 168 PRINTS PR00070 Dihydrofolate reductase signature 16 26 2.3E-12 T 26-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 smi_1561 b5769d61de553d29f4940ce2c100cea5 168 PRINTS PR00070 Dihydrofolate reductase signature 43 54 2.3E-12 T 26-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 smi_1561 b5769d61de553d29f4940ce2c100cea5 168 PRINTS PR00070 Dihydrofolate reductase signature 96 110 2.3E-12 T 26-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 smi_1561 b5769d61de553d29f4940ce2c100cea5 168 ProSitePatterns PS00075 Dihydrofolate reductase (DHFR) domain signature. 16 38 - T 26-04-2016 IPR017925 Dihydrofolate reductase conserved site GO:0004146|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 smi_1561 b5769d61de553d29f4940ce2c100cea5 168 Gene3D G3DSA:3.40.430.10 4 166 1.8E-54 T 26-04-2016 IPR024072 Dihydrofolate reductase-like domain smi_1561 b5769d61de553d29f4940ce2c100cea5 168 PANTHER PTHR22778 1 168 4.1E-34 T 26-04-2016 smi_1729 935748b1432b9b59fb9b2ff3348fa938 455 Gene3D G3DSA:1.25.40.10 96 302 9.1E-19 T 26-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 smi_1729 935748b1432b9b59fb9b2ff3348fa938 455 SUPERFAMILY SSF48452 101 221 4.38E-16 T 26-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 smi_1729 935748b1432b9b59fb9b2ff3348fa938 455 SMART SM00028 128 161 37.0 T 26-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 smi_1729 935748b1432b9b59fb9b2ff3348fa938 455 SMART SM00028 234 267 190.0 T 26-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 smi_1729 935748b1432b9b59fb9b2ff3348fa938 455 SMART SM00028 162 195 0.052 T 26-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 smi_1729 935748b1432b9b59fb9b2ff3348fa938 455 SMART SM00028 94 127 65.0 T 26-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 smi_1729 935748b1432b9b59fb9b2ff3348fa938 455 PANTHER PTHR23083 434 443 1.0E-11 T 26-04-2016 smi_1729 935748b1432b9b59fb9b2ff3348fa938 455 PANTHER PTHR23083 67 264 1.0E-11 T 26-04-2016 smi_1729 935748b1432b9b59fb9b2ff3348fa938 455 Pfam PF13181 Tetratricopeptide repeat 236 263 0.02 T 26-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 smi_1729 935748b1432b9b59fb9b2ff3348fa938 455 SUPERFAMILY SSF48452 193 310 2.31E-5 T 26-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 smi_1729 935748b1432b9b59fb9b2ff3348fa938 455 Gene3D G3DSA:1.10.287.110 3 74 7.2E-7 T 26-04-2016 IPR001623 DnaJ domain smi_1729 935748b1432b9b59fb9b2ff3348fa938 455 SUPERFAMILY SSF46565 2 74 2.88E-7 T 26-04-2016 IPR001623 DnaJ domain smi_1803 1ff51fbbaf11f97a646b2d602125c123 375 Gene3D G3DSA:3.30.930.10 50 375 6.1E-129 T 26-04-2016 smi_1803 1ff51fbbaf11f97a646b2d602125c123 375 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 41 374 45.594 T 26-04-2016 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 smi_1803 1ff51fbbaf11f97a646b2d602125c123 375 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 71 375 4.2E-105 T 26-04-2016 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 smi_1803 1ff51fbbaf11f97a646b2d602125c123 375 PANTHER PTHR11538 125 375 1.0E-105 T 26-04-2016 smi_1803 1ff51fbbaf11f97a646b2d602125c123 375 Pfam PF01409 tRNA synthetases class II core domain (F) 125 374 2.0E-107 T 26-04-2016 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 smi_1803 1ff51fbbaf11f97a646b2d602125c123 375 SUPERFAMILY SSF46589 50 132 6.8E-19 T 26-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 smi_1803 1ff51fbbaf11f97a646b2d602125c123 375 SUPERFAMILY SSF55681 125 375 6.35E-81 T 26-04-2016 smi_1803 1ff51fbbaf11f97a646b2d602125c123 375 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 53 120 6.6E-20 T 26-04-2016 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 smi_1486 d9548d293bd2e20b0cdef179033c0d30 370 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 227 354 35.086 T 26-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 smi_1486 d9548d293bd2e20b0cdef179033c0d30 370 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 60 215 35.716 T 26-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 smi_1486 d9548d293bd2e20b0cdef179033c0d30 370 Gene3D G3DSA:2.170.150.20 222 369 1.2E-60 T 26-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 smi_1486 d9548d293bd2e20b0cdef179033c0d30 370 Pfam PF01625 Peptide methionine sulfoxide reductase 62 210 1.8E-57 T 26-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 smi_1486 d9548d293bd2e20b0cdef179033c0d30 370 SUPERFAMILY SSF51316 228 368 7.32E-59 T 26-04-2016 IPR011057 Mss4-like smi_1486 d9548d293bd2e20b0cdef179033c0d30 370 Gene3D G3DSA:3.30.1060.10 50 210 4.7E-65 T 26-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 smi_1486 d9548d293bd2e20b0cdef179033c0d30 370 SUPERFAMILY SSF55068 56 220 1.7E-61 T 26-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 smi_1486 d9548d293bd2e20b0cdef179033c0d30 370 PANTHER PTHR10173 332 370 2.3E-90 T 26-04-2016 IPR028427 Peptide methionine sulfoxide reductase GO:0006979|GO:0016671|GO:0030091 smi_1486 d9548d293bd2e20b0cdef179033c0d30 370 PANTHER PTHR10173 55 203 2.3E-90 T 26-04-2016 IPR028427 Peptide methionine sulfoxide reductase GO:0006979|GO:0016671|GO:0030091 smi_1486 d9548d293bd2e20b0cdef179033c0d30 370 Pfam PF01641 SelR domain 233 353 1.4E-46 T 26-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 smi_1486 d9548d293bd2e20b0cdef179033c0d30 370 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 228 362 8.4E-63 T 26-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 smi_1486 d9548d293bd2e20b0cdef179033c0d30 370 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 62 209 2.0E-50 T 26-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 smi_1486 d9548d293bd2e20b0cdef179033c0d30 370 PANTHER PTHR10173:SF31 332 370 2.3E-90 T 26-04-2016 smi_1486 d9548d293bd2e20b0cdef179033c0d30 370 PANTHER PTHR10173:SF31 55 203 2.3E-90 T 26-04-2016 smi_1243 0521551f7ac08da62e86adee991d538c 237 Gene3D G3DSA:3.40.50.150 2 237 1.7E-73 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase smi_1243 0521551f7ac08da62e86adee991d538c 237 SUPERFAMILY SSF53335 2 237 2.19E-46 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase smi_1243 0521551f7ac08da62e86adee991d538c 237 PIRSF PIRSF003078 2 220 8.2E-51 T 26-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 smi_1243 0521551f7ac08da62e86adee991d538c 237 PANTHER PTHR31760:SF0 9 237 1.8E-81 T 26-04-2016 smi_1243 0521551f7ac08da62e86adee991d538c 237 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 14 215 27.623 T 26-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 smi_1243 0521551f7ac08da62e86adee991d538c 237 Pfam PF02527 rRNA small subunit methyltransferase G 22 192 3.1E-48 T 26-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 smi_1243 0521551f7ac08da62e86adee991d538c 237 PANTHER PTHR31760 9 237 1.8E-81 T 26-04-2016 smi_1243 0521551f7ac08da62e86adee991d538c 237 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 25 192 9.5E-47 T 26-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 smi_1888 40840c16d6511464c3c47a851e1edc33 164 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 9 161 3.6E-68 T 26-04-2016 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 smi_1888 40840c16d6511464c3c47a851e1edc33 164 PANTHER PTHR13718 9 160 1.3E-72 T 26-04-2016 IPR000851 Ribosomal protein S5 GO:0003735|GO:0005840|GO:0006412 smi_1888 40840c16d6511464c3c47a851e1edc33 164 SUPERFAMILY SSF54211 79 157 1.59E-24 T 26-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold smi_1888 40840c16d6511464c3c47a851e1edc33 164 Gene3D G3DSA:3.30.160.20 9 71 9.2E-32 T 26-04-2016 IPR014720 Double-stranded RNA-binding domain smi_1888 40840c16d6511464c3c47a851e1edc33 164 Pfam PF00333 Ribosomal protein S5, N-terminal domain 10 74 2.0E-31 T 26-04-2016 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 smi_1888 40840c16d6511464c3c47a851e1edc33 164 Gene3D G3DSA:3.30.230.10 75 157 8.0E-31 T 26-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup smi_1888 40840c16d6511464c3c47a851e1edc33 164 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 162 35.805 T 26-04-2016 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 smi_1888 40840c16d6511464c3c47a851e1edc33 164 ProSitePatterns PS00585 Ribosomal protein S5 signature. 27 59 - T 26-04-2016 IPR018192 Ribosomal protein S5, N-terminal, conserved site smi_1888 40840c16d6511464c3c47a851e1edc33 164 SUPERFAMILY SSF54768 8 75 1.99E-24 T 26-04-2016 smi_1888 40840c16d6511464c3c47a851e1edc33 164 Pfam PF03719 Ribosomal protein S5, C-terminal domain 87 156 3.9E-28 T 26-04-2016 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 smi_0066 190da18bc4c18d6005449229353ee7d6 292 Pfam PF01259 SAICAR synthetase 62 282 2.2E-63 T 26-04-2016 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 smi_0066 190da18bc4c18d6005449229353ee7d6 292 Gene3D G3DSA:3.30.200.20 62 149 2.6E-40 T 26-04-2016 smi_0066 190da18bc4c18d6005449229353ee7d6 292 Gene3D G3DSA:3.30.470.20 150 275 2.8E-49 T 26-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 smi_0066 190da18bc4c18d6005449229353ee7d6 292 PANTHER PTHR11609:SF2 1 288 3.2E-116 T 26-04-2016 smi_0066 190da18bc4c18d6005449229353ee7d6 292 PANTHER PTHR11609 1 288 3.2E-116 T 26-04-2016 smi_0066 190da18bc4c18d6005449229353ee7d6 292 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 60 290 33.273 T 26-04-2016 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 smi_0066 190da18bc4c18d6005449229353ee7d6 292 SUPERFAMILY SSF56104 58 290 2.55E-80 T 26-04-2016 smi_0066 190da18bc4c18d6005449229353ee7d6 292 ProSitePatterns PS01057 SAICAR synthetase signature 1. 142 156 - T 26-04-2016 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 smi_0066 190da18bc4c18d6005449229353ee7d6 292 TIGRFAM TIGR00081 purC: phosphoribosylaminoimidazolesuccinocarboxamide synthase 59 261 1.0E-70 T 26-04-2016 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 smi_0066 190da18bc4c18d6005449229353ee7d6 292 ProSitePatterns PS01058 SAICAR synthetase signature 2. 229 237 - T 26-04-2016 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 smi_1279 64f699b1f37eb5d2959d501205dde0a2 195 SUPERFAMILY SSF53041 1 147 2.49E-34 T 26-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 smi_1279 64f699b1f37eb5d2959d501205dde0a2 195 PANTHER PTHR30461 1 192 7.6E-29 T 26-04-2016 smi_1279 64f699b1f37eb5d2959d501205dde0a2 195 Pfam PF00239 Resolvase, N terminal domain 3 147 3.2E-32 T 26-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 smi_1279 64f699b1f37eb5d2959d501205dde0a2 195 Gene3D G3DSA:3.40.50.1390 2 132 5.1E-32 T 26-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 smi_1279 64f699b1f37eb5d2959d501205dde0a2 195 ProSitePatterns PS00397 Site-specific recombinases active site. 5 13 - T 26-04-2016 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 smi_1279 64f699b1f37eb5d2959d501205dde0a2 195 SMART SM00857 2 148 6.1E-35 T 26-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 smi_0701 f294d450d71dc113cea048032b97edba 330 SMART SM00382 49 233 9.2E-14 T 26-04-2016 IPR003593 AAA+ ATPase domain smi_0701 f294d450d71dc113cea048032b97edba 330 PANTHER PTHR24220 37 263 3.9E-89 T 26-04-2016 smi_0701 f294d450d71dc113cea048032b97edba 330 PANTHER PTHR24220 5 13 3.9E-89 T 26-04-2016 smi_0701 f294d450d71dc113cea048032b97edba 330 PANTHER PTHR24220 290 322 3.9E-89 T 26-04-2016 smi_0701 f294d450d71dc113cea048032b97edba 330 PANTHER PTHR24220:SF333 37 263 3.9E-89 T 26-04-2016 smi_0701 f294d450d71dc113cea048032b97edba 330 PANTHER PTHR24220:SF333 5 13 3.9E-89 T 26-04-2016 smi_0701 f294d450d71dc113cea048032b97edba 330 PANTHER PTHR24220:SF333 290 322 3.9E-89 T 26-04-2016 smi_0701 f294d450d71dc113cea048032b97edba 330 Gene3D G3DSA:3.40.50.300 3 256 4.5E-60 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0701 f294d450d71dc113cea048032b97edba 330 SUPERFAMILY SSF52540 36 254 1.47E-56 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0701 f294d450d71dc113cea048032b97edba 330 Pfam PF00005 ABC transporter 41 184 3.7E-27 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 smi_0701 f294d450d71dc113cea048032b97edba 330 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 26-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 smi_1130 0b9342d4c0801e0591912341fc73a8b9 60 SUPERFAMILY SSF55331 2 58 1.96E-18 T 26-04-2016 IPR014347 Tautomerase/MIF superfamily smi_1130 0b9342d4c0801e0591912341fc73a8b9 60 Pfam PF01361 Tautomerase enzyme 2 57 7.8E-25 T 26-04-2016 IPR004370 4-oxalocrotonate tautomerase GO:0006725|GO:0016853 smi_1130 0b9342d4c0801e0591912341fc73a8b9 60 Gene3D G3DSA:3.30.429.20 1 57 6.6E-23 T 26-04-2016 smi_1130 0b9342d4c0801e0591912341fc73a8b9 60 PANTHER PTHR35530 1 59 9.9E-20 T 26-04-2016 smi_0733 c50f56503176c70d413a2e2c87e797d4 305 Gene3D G3DSA:1.10.3720.10 31 301 2.9E-44 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 smi_0733 c50f56503176c70d413a2e2c87e797d4 305 SUPERFAMILY SSF161098 24 293 1.09E-40 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 smi_0733 c50f56503176c70d413a2e2c87e797d4 305 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 20 297 2.9E-88 T 26-04-2016 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 smi_0733 c50f56503176c70d413a2e2c87e797d4 305 PANTHER PTHR30425 1 305 9.4E-168 T 26-04-2016 smi_0733 c50f56503176c70d413a2e2c87e797d4 305 PANTHER PTHR30425:SF6 1 305 9.4E-168 T 26-04-2016 smi_0733 c50f56503176c70d413a2e2c87e797d4 305 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 101 296 4.4E-27 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 smi_0568 a04275e954ca961ff0ad1c26b00be1e7 222 ProSitePatterns PS00221 MIP family signature. 58 66 - T 26-04-2016 IPR022357 Major intrinsic protein, conserved site GO:0005215|GO:0006810|GO:0016020 smi_0568 a04275e954ca961ff0ad1c26b00be1e7 222 Gene3D G3DSA:1.20.1080.10 1 220 7.9E-59 T 26-04-2016 IPR023271 Aquaporin-like smi_0568 a04275e954ca961ff0ad1c26b00be1e7 222 PRINTS PR00783 Major intrinsic protein family signature 158 180 3.4E-47 T 26-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 smi_0568 a04275e954ca961ff0ad1c26b00be1e7 222 PRINTS PR00783 Major intrinsic protein family signature 77 96 3.4E-47 T 26-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 smi_0568 a04275e954ca961ff0ad1c26b00be1e7 222 PRINTS PR00783 Major intrinsic protein family signature 2 21 3.4E-47 T 26-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 smi_0568 a04275e954ca961ff0ad1c26b00be1e7 222 PRINTS PR00783 Major intrinsic protein family signature 127 145 3.4E-47 T 26-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 smi_0568 a04275e954ca961ff0ad1c26b00be1e7 222 PRINTS PR00783 Major intrinsic protein family signature 40 64 3.4E-47 T 26-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 smi_0568 a04275e954ca961ff0ad1c26b00be1e7 222 PRINTS PR00783 Major intrinsic protein family signature 197 217 3.4E-47 T 26-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 smi_0568 a04275e954ca961ff0ad1c26b00be1e7 222 Pfam PF00230 Major intrinsic protein 2 213 1.8E-47 T 26-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 smi_0568 a04275e954ca961ff0ad1c26b00be1e7 222 SUPERFAMILY SSF81338 1 220 1.7E-56 T 26-04-2016 IPR023271 Aquaporin-like smi_0568 a04275e954ca961ff0ad1c26b00be1e7 222 PANTHER PTHR19139 1 221 1.1E-61 T 26-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 smi_1367 e0b63fb00a17a74dc4f6c7c21d7a1915 262 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 22 71 4.2E-6 T 26-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 smi_1367 e0b63fb00a17a74dc4f6c7c21d7a1915 262 SUPERFAMILY SSF47413 11 81 5.63E-8 T 26-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 smi_1367 e0b63fb00a17a74dc4f6c7c21d7a1915 262 Gene3D G3DSA:1.10.260.40 14 72 7.7E-8 T 26-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 smi_1367 e0b63fb00a17a74dc4f6c7c21d7a1915 262 SMART SM00530 22 77 3.4E-4 T 26-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 smi_1367 e0b63fb00a17a74dc4f6c7c21d7a1915 262 Pfam PF00717 Peptidase S24-like 181 246 8.0E-16 T 26-04-2016 IPR019759 Peptidase S24/S26A/S26B smi_1367 e0b63fb00a17a74dc4f6c7c21d7a1915 262 Gene3D G3DSA:2.10.109.10 148 262 2.9E-26 T 26-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain smi_1367 e0b63fb00a17a74dc4f6c7c21d7a1915 262 SUPERFAMILY SSF51306 143 261 1.31E-26 T 26-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C smi_0590 6637d61abac9a35d48ba6d783e40c162 343 SUPERFAMILY SSF51569 7 341 4.4E-93 T 26-04-2016 smi_0590 6637d61abac9a35d48ba6d783e40c162 343 Gene3D G3DSA:3.20.20.70 5 341 1.9E-104 T 26-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 smi_0590 6637d61abac9a35d48ba6d783e40c162 343 PANTHER PTHR21225 8 343 2.2E-173 T 26-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 smi_0590 6637d61abac9a35d48ba6d783e40c162 343 PIRSF PIRSF001361 1 343 1.8E-111 T 26-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 smi_0590 6637d61abac9a35d48ba6d783e40c162 343 Pfam PF00793 DAHP synthetase I family 37 333 9.7E-48 T 26-04-2016 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 smi_0590 6637d61abac9a35d48ba6d783e40c162 343 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 24 341 1.5E-74 T 26-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 smi_1843 3564b47f402b51994cd793a474bcf435 147 SUPERFAMILY SSF52540 20 117 2.11E-21 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1843 3564b47f402b51994cd793a474bcf435 147 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 4 131 5.2E-34 T 26-04-2016 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 smi_1843 3564b47f402b51994cd793a474bcf435 147 PANTHER PTHR33540 1 127 1.5E-40 T 26-04-2016 smi_1843 3564b47f402b51994cd793a474bcf435 147 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 4 125 4.2E-34 T 26-04-2016 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 smi_1843 3564b47f402b51994cd793a474bcf435 147 Gene3D G3DSA:3.40.50.300 3 143 6.0E-45 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1059 3bdeb4c48d13b69a7a1e909d1334bad4 356 PANTHER PTHR30349:SF17 188 354 5.9E-112 T 26-04-2016 smi_1059 3bdeb4c48d13b69a7a1e909d1334bad4 356 PANTHER PTHR30349:SF17 11 159 5.9E-112 T 26-04-2016 smi_1059 3bdeb4c48d13b69a7a1e909d1334bad4 356 Hamap MF_01816 Tyrosine recombinase XerS [xerS]. 1 356 57.552 T 26-04-2016 IPR023670 Tyrosine recombinase XerS GO:0006310|GO:0007049|GO:0007059|GO:0015074|GO:0051301 smi_1059 3bdeb4c48d13b69a7a1e909d1334bad4 356 Gene3D G3DSA:1.10.443.10 186 353 2.0E-38 T 26-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 smi_1059 3bdeb4c48d13b69a7a1e909d1334bad4 356 PANTHER PTHR30349 188 354 5.9E-112 T 26-04-2016 smi_1059 3bdeb4c48d13b69a7a1e909d1334bad4 356 PANTHER PTHR30349 11 159 5.9E-112 T 26-04-2016 smi_1059 3bdeb4c48d13b69a7a1e909d1334bad4 356 Pfam PF00589 Phage integrase family 188 344 3.4E-24 T 26-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 smi_1059 3bdeb4c48d13b69a7a1e909d1334bad4 356 Gene3D G3DSA:1.10.150.130 28 123 9.4E-11 T 26-04-2016 IPR023109 Integrase/recombinase, N-terminal smi_1059 3bdeb4c48d13b69a7a1e909d1334bad4 356 SUPERFAMILY SSF56349 187 353 5.59E-34 T 26-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 smi_1222 5ec1ae56c40dfae8ff6bdc813ee6b3d8 695 SMART SM00493 14 114 1.5E-27 T 26-04-2016 IPR006171 Toprim domain smi_1222 5ec1ae56c40dfae8ff6bdc813ee6b3d8 695 Gene3D G3DSA:1.10.460.10 661 667 5.3E-59 T 26-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 smi_1222 5ec1ae56c40dfae8ff6bdc813ee6b3d8 695 Gene3D G3DSA:1.10.460.10 146 193 5.3E-59 T 26-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 smi_1222 5ec1ae56c40dfae8ff6bdc813ee6b3d8 695 Gene3D G3DSA:1.10.460.10 460 564 5.3E-59 T 26-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 smi_1222 5ec1ae56c40dfae8ff6bdc813ee6b3d8 695 Pfam PF01131 DNA topoisomerase 138 551 1.1E-128 T 26-04-2016 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 smi_1222 5ec1ae56c40dfae8ff6bdc813ee6b3d8 695 SUPERFAMILY SSF56712 14 592 5.1E-191 T 26-04-2016 IPR023405 DNA topoisomerase, type IA, core domain smi_1222 5ec1ae56c40dfae8ff6bdc813ee6b3d8 695 SUPERFAMILY SSF57783 576 616 1.11E-12 T 26-04-2016 smi_1222 5ec1ae56c40dfae8ff6bdc813ee6b3d8 695 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 290 312 - T 26-04-2016 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 smi_1222 5ec1ae56c40dfae8ff6bdc813ee6b3d8 695 SMART SM00436 115 203 8.0E-51 T 26-04-2016 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 smi_1222 5ec1ae56c40dfae8ff6bdc813ee6b3d8 695 SMART SM00437 253 513 7.3E-104 T 26-04-2016 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 smi_1222 5ec1ae56c40dfae8ff6bdc813ee6b3d8 695 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 88 101 2.2E-36 T 26-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 smi_1222 5ec1ae56c40dfae8ff6bdc813ee6b3d8 695 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 379 395 2.2E-36 T 26-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 smi_1222 5ec1ae56c40dfae8ff6bdc813ee6b3d8 695 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 476 490 2.2E-36 T 26-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 smi_1222 5ec1ae56c40dfae8ff6bdc813ee6b3d8 695 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 173 191 2.2E-36 T 26-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 smi_1222 5ec1ae56c40dfae8ff6bdc813ee6b3d8 695 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 303 312 2.2E-36 T 26-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 smi_1222 5ec1ae56c40dfae8ff6bdc813ee6b3d8 695 Gene3D G3DSA:3.30.65.10 567 625 8.2E-19 T 26-04-2016 smi_1222 5ec1ae56c40dfae8ff6bdc813ee6b3d8 695 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 620 658 1.7E-13 T 26-04-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 smi_1222 5ec1ae56c40dfae8ff6bdc813ee6b3d8 695 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 581 615 1.7E-13 T 26-04-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 smi_1222 5ec1ae56c40dfae8ff6bdc813ee6b3d8 695 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 660 685 0.74 T 26-04-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 smi_1222 5ec1ae56c40dfae8ff6bdc813ee6b3d8 695 PANTHER PTHR11390:SF27 12 685 0.0 T 26-04-2016 smi_1222 5ec1ae56c40dfae8ff6bdc813ee6b3d8 695 Pfam PF01751 Toprim domain 16 124 2.4E-30 T 26-04-2016 IPR006171 Toprim domain smi_1222 5ec1ae56c40dfae8ff6bdc813ee6b3d8 695 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 16 614 5.7E-243 T 26-04-2016 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 smi_1222 5ec1ae56c40dfae8ff6bdc813ee6b3d8 695 Gene3D G3DSA:2.70.20.10 195 324 4.0E-31 T 26-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 smi_1222 5ec1ae56c40dfae8ff6bdc813ee6b3d8 695 Gene3D G3DSA:2.70.20.10 327 459 2.9E-32 T 26-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 smi_1222 5ec1ae56c40dfae8ff6bdc813ee6b3d8 695 Hamap MF_00952 DNA topoisomerase 1 [topA]. 14 636 55.172 T 26-04-2016 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 smi_1222 5ec1ae56c40dfae8ff6bdc813ee6b3d8 695 Gene3D G3DSA:3.40.50.140 13 145 2.3E-46 T 26-04-2016 IPR006171 Toprim domain smi_1222 5ec1ae56c40dfae8ff6bdc813ee6b3d8 695 PANTHER PTHR11390 12 685 0.0 T 26-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 smi_0409 bf54166eb654876d86130b6f2851f124 246 PANTHER PTHR10245:SF32 1 245 5.6E-14 T 26-04-2016 smi_0409 bf54166eb654876d86130b6f2851f124 246 Gene3D G3DSA:1.10.260.40 1 68 1.3E-17 T 26-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 smi_0409 bf54166eb654876d86130b6f2851f124 246 PANTHER PTHR10245 1 245 5.6E-14 T 26-04-2016 smi_0409 bf54166eb654876d86130b6f2851f124 246 Pfam PF12844 Helix-turn-helix domain 3 73 5.2E-11 T 26-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 smi_0409 bf54166eb654876d86130b6f2851f124 246 SUPERFAMILY SSF51306 128 245 1.31E-25 T 26-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C smi_0409 bf54166eb654876d86130b6f2851f124 246 Gene3D G3DSA:2.10.109.10 128 245 1.4E-27 T 26-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain smi_0409 bf54166eb654876d86130b6f2851f124 246 SMART SM00530 5 68 2.2E-10 T 26-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 smi_0409 bf54166eb654876d86130b6f2851f124 246 SUPERFAMILY SSF47413 1 73 1.86E-12 T 26-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 smi_0409 bf54166eb654876d86130b6f2851f124 246 Pfam PF00717 Peptidase S24-like 162 229 4.6E-12 T 26-04-2016 IPR019759 Peptidase S24/S26A/S26B smi_0354 53f221ff5a3fd779637bbca17e028c5c 174 PANTHER PTHR21237 8 172 1.6E-46 T 26-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 smi_0354 53f221ff5a3fd779637bbca17e028c5c 174 Pfam PF01025 GrpE 13 173 4.0E-45 T 26-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 smi_0354 53f221ff5a3fd779637bbca17e028c5c 174 Gene3D G3DSA:2.30.22.10 118 173 2.1E-22 T 26-04-2016 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 smi_0354 53f221ff5a3fd779637bbca17e028c5c 174 Hamap MF_01151 Protein GrpE [grpE]. 3 174 18.771 T 26-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 smi_0354 53f221ff5a3fd779637bbca17e028c5c 174 Gene3D G3DSA:3.90.20.20 22 116 1.7E-24 T 26-04-2016 IPR013805 GrpE nucleotide exchange factor, coiled-coil smi_0354 53f221ff5a3fd779637bbca17e028c5c 174 SUPERFAMILY SSF58014 29 118 4.45E-21 T 26-04-2016 smi_0354 53f221ff5a3fd779637bbca17e028c5c 174 PRINTS PR00773 GrpE protein signature 47 63 5.6E-24 T 26-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 smi_0354 53f221ff5a3fd779637bbca17e028c5c 174 PRINTS PR00773 GrpE protein signature 125 140 5.6E-24 T 26-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 smi_0354 53f221ff5a3fd779637bbca17e028c5c 174 PRINTS PR00773 GrpE protein signature 75 90 5.6E-24 T 26-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 smi_0354 53f221ff5a3fd779637bbca17e028c5c 174 PRINTS PR00773 GrpE protein signature 153 172 5.6E-24 T 26-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 smi_0354 53f221ff5a3fd779637bbca17e028c5c 174 SUPERFAMILY SSF51064 126 173 1.44E-13 T 26-04-2016 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 smi_0354 53f221ff5a3fd779637bbca17e028c5c 174 ProSitePatterns PS01071 grpE protein signature. 128 172 - T 26-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 smi_0810 30ad655c14aab42f51d9f624dd0b9619 979 TIGRFAM TIGR01167 LPXTG_anchor: LPXTG cell wall anchor domain 942 975 1.9E-5 T 26-04-2016 IPR019931 LPXTG cell wall anchor domain smi_0810 30ad655c14aab42f51d9f624dd0b9619 979 Pfam PF07564 Domain of Unknown Function (DUF1542) 699 770 3.9E-11 T 26-04-2016 IPR011439 Domain of unknown function DUF1542 smi_0810 30ad655c14aab42f51d9f624dd0b9619 979 Pfam PF07564 Domain of Unknown Function (DUF1542) 578 642 4.4E-14 T 26-04-2016 IPR011439 Domain of unknown function DUF1542 smi_0810 30ad655c14aab42f51d9f624dd0b9619 979 Pfam PF07564 Domain of Unknown Function (DUF1542) 640 689 1.6E-5 T 26-04-2016 IPR011439 Domain of unknown function DUF1542 smi_0810 30ad655c14aab42f51d9f624dd0b9619 979 Pfam PF07564 Domain of Unknown Function (DUF1542) 780 842 1.0E-13 T 26-04-2016 IPR011439 Domain of unknown function DUF1542 smi_0810 30ad655c14aab42f51d9f624dd0b9619 979 Pfam PF07564 Domain of Unknown Function (DUF1542) 501 568 1.7E-12 T 26-04-2016 IPR011439 Domain of unknown function DUF1542 smi_0810 30ad655c14aab42f51d9f624dd0b9619 979 TIGRFAM TIGR01168 YSIRK_signal: gram-positive signal peptide, YSIRK family 8 43 2.9E-10 T 26-04-2016 IPR005877 YSIRK Gram-positive signal peptide GO:0016020 smi_0810 30ad655c14aab42f51d9f624dd0b9619 979 Pfam PF04650 YSIRK type signal peptide 11 36 3.6E-9 T 26-04-2016 IPR005877 YSIRK Gram-positive signal peptide GO:0016020 smi_1951 7ea262a4e9032ead944dbdfe54be7423 336 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 6 313 3.9E-130 T 26-04-2016 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 smi_1951 7ea262a4e9032ead944dbdfe54be7423 336 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 7 307 7.1E-106 T 26-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 smi_1951 7ea262a4e9032ead944dbdfe54be7423 336 Pfam PF00814 Glycoprotease family 26 308 3.3E-105 T 26-04-2016 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 smi_1951 7ea262a4e9032ead944dbdfe54be7423 336 SUPERFAMILY SSF53067 5 310 4.07E-42 T 26-04-2016 smi_1951 7ea262a4e9032ead944dbdfe54be7423 336 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 7 20 2.36E-48 T 26-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 smi_1951 7ea262a4e9032ead944dbdfe54be7423 336 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 100 119 2.36E-48 T 26-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 smi_1951 7ea262a4e9032ead944dbdfe54be7423 336 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 156 177 2.36E-48 T 26-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 smi_1951 7ea262a4e9032ead944dbdfe54be7423 336 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 133 145 2.36E-48 T 26-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 smi_1951 7ea262a4e9032ead944dbdfe54be7423 336 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 266 275 2.36E-48 T 26-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 smi_1951 7ea262a4e9032ead944dbdfe54be7423 336 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 79 99 2.36E-48 T 26-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 smi_1951 7ea262a4e9032ead944dbdfe54be7423 336 Gene3D G3DSA:3.30.420.40 5 161 2.7E-49 T 26-04-2016 smi_1951 7ea262a4e9032ead944dbdfe54be7423 336 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 4 332 59.67 T 26-04-2016 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 smi_1951 7ea262a4e9032ead944dbdfe54be7423 336 ProSitePatterns PS01016 Glycoprotease family signature. 99 119 - T 26-04-2016 IPR017860 Peptidase M22, conserved site KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 smi_1951 7ea262a4e9032ead944dbdfe54be7423 336 Gene3D G3DSA:3.30.420.40 242 295 2.0E-4 T 26-04-2016 smi_1951 7ea262a4e9032ead944dbdfe54be7423 336 PANTHER PTHR11735 1 336 6.5E-150 T 26-04-2016 smi_1951 7ea262a4e9032ead944dbdfe54be7423 336 PANTHER PTHR11735:SF6 1 336 6.5E-150 T 26-04-2016 smi_0542 d53ea2ca29b8473b9c9fcfb8be2e75d7 188 PANTHER PTHR11922 1 184 1.0E-70 T 26-04-2016 smi_0542 d53ea2ca29b8473b9c9fcfb8be2e75d7 188 PRINTS PR00096 Glutamine amidotransferase superfamily signature 162 175 8.9E-13 T 26-04-2016 smi_0542 d53ea2ca29b8473b9c9fcfb8be2e75d7 188 PRINTS PR00096 Glutamine amidotransferase superfamily signature 45 54 8.9E-13 T 26-04-2016 smi_0542 d53ea2ca29b8473b9c9fcfb8be2e75d7 188 PRINTS PR00096 Glutamine amidotransferase superfamily signature 72 83 8.9E-13 T 26-04-2016 smi_0542 d53ea2ca29b8473b9c9fcfb8be2e75d7 188 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 42 56 2.3E-7 T 26-04-2016 smi_0542 d53ea2ca29b8473b9c9fcfb8be2e75d7 188 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 72 88 2.3E-7 T 26-04-2016 smi_0542 d53ea2ca29b8473b9c9fcfb8be2e75d7 188 PANTHER PTHR11922:SF7 1 184 1.0E-70 T 26-04-2016 smi_0542 d53ea2ca29b8473b9c9fcfb8be2e75d7 188 PRINTS PR00097 Anthranilate synthase component II signature 162 175 1.1E-30 T 26-04-2016 smi_0542 d53ea2ca29b8473b9c9fcfb8be2e75d7 188 PRINTS PR00097 Anthranilate synthase component II signature 45 54 1.1E-30 T 26-04-2016 smi_0542 d53ea2ca29b8473b9c9fcfb8be2e75d7 188 PRINTS PR00097 Anthranilate synthase component II signature 118 130 1.1E-30 T 26-04-2016 smi_0542 d53ea2ca29b8473b9c9fcfb8be2e75d7 188 PRINTS PR00097 Anthranilate synthase component II signature 97 105 1.1E-30 T 26-04-2016 smi_0542 d53ea2ca29b8473b9c9fcfb8be2e75d7 188 PRINTS PR00097 Anthranilate synthase component II signature 72 83 1.1E-30 T 26-04-2016 smi_0542 d53ea2ca29b8473b9c9fcfb8be2e75d7 188 PRINTS PR00097 Anthranilate synthase component II signature 2 16 1.1E-30 T 26-04-2016 smi_0542 d53ea2ca29b8473b9c9fcfb8be2e75d7 188 Pfam PF00117 Glutamine amidotransferase class-I 3 184 1.3E-45 T 26-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 smi_0542 d53ea2ca29b8473b9c9fcfb8be2e75d7 188 SUPERFAMILY SSF52317 1 186 6.95E-49 T 26-04-2016 IPR029062 Class I glutamine amidotransferase-like smi_0542 d53ea2ca29b8473b9c9fcfb8be2e75d7 188 Gene3D G3DSA:3.40.50.880 1 184 1.2E-57 T 26-04-2016 IPR029062 Class I glutamine amidotransferase-like smi_0542 d53ea2ca29b8473b9c9fcfb8be2e75d7 188 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 1 184 5.6E-52 T 26-04-2016 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain GO:0008152 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 smi_1233 e96732c5d725d75471bc7997c1e6df7e 1058 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1057 13.058 T 26-04-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 smi_1233 e96732c5d725d75471bc7997c1e6df7e 1058 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 702 716 - T 26-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 smi_1233 e96732c5d725d75471bc7997c1e6df7e 1058 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 164 178 - T 26-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 smi_1233 e96732c5d725d75471bc7997c1e6df7e 1058 SUPERFAMILY SSF56059 666 927 3.71E-102 T 26-04-2016 smi_1233 e96732c5d725d75471bc7997c1e6df7e 1058 Gene3D G3DSA:3.40.50.1380 931 1051 2.1E-29 T 26-04-2016 IPR011607 Methylglyoxal synthase-like domain smi_1233 e96732c5d725d75471bc7997c1e6df7e 1058 PANTHER PTHR11405 1 1050 0.0 T 26-04-2016 smi_1233 e96732c5d725d75471bc7997c1e6df7e 1058 Gene3D G3DSA:3.40.50.20 532 655 1.9E-57 T 26-04-2016 IPR016185 Pre-ATP-grasp domain smi_1233 e96732c5d725d75471bc7997c1e6df7e 1058 SMART SM01209 674 837 0.0016 T 26-04-2016 smi_1233 e96732c5d725d75471bc7997c1e6df7e 1058 SUPERFAMILY SSF52440 549 668 4.75E-46 T 26-04-2016 IPR016185 Pre-ATP-grasp domain smi_1233 e96732c5d725d75471bc7997c1e6df7e 1058 SUPERFAMILY SSF56059 128 399 2.12E-105 T 26-04-2016 smi_1233 e96732c5d725d75471bc7997c1e6df7e 1058 SUPERFAMILY SSF52335 929 1050 4.71E-28 T 26-04-2016 IPR011607 Methylglyoxal synthase-like domain smi_1233 e96732c5d725d75471bc7997c1e6df7e 1058 PANTHER PTHR11405:SF5 1 1050 0.0 T 26-04-2016 smi_1233 e96732c5d725d75471bc7997c1e6df7e 1058 SUPERFAMILY SSF52440 1 127 1.58E-49 T 26-04-2016 IPR016185 Pre-ATP-grasp domain smi_1233 e96732c5d725d75471bc7997c1e6df7e 1058 Pfam PF02142 MGS-like domain 950 1036 6.2E-16 T 26-04-2016 IPR011607 Methylglyoxal synthase-like domain smi_1233 e96732c5d725d75471bc7997c1e6df7e 1058 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 2.4E-62 T 26-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 smi_1233 e96732c5d725d75471bc7997c1e6df7e 1058 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 2.4E-62 T 26-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 smi_1233 e96732c5d725d75471bc7997c1e6df7e 1058 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 378 396 2.4E-62 T 26-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 smi_1233 e96732c5d725d75471bc7997c1e6df7e 1058 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 296 325 2.4E-62 T 26-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 smi_1233 e96732c5d725d75471bc7997c1e6df7e 1058 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 2.4E-62 T 26-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 smi_1233 e96732c5d725d75471bc7997c1e6df7e 1058 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 2.4E-62 T 26-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 smi_1233 e96732c5d725d75471bc7997c1e6df7e 1058 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 2.4E-62 T 26-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 smi_1233 e96732c5d725d75471bc7997c1e6df7e 1058 Gene3D G3DSA:3.30.470.20 738 927 9.9E-74 T 26-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 smi_1233 e96732c5d725d75471bc7997c1e6df7e 1058 Gene3D G3DSA:3.30.470.20 200 398 2.5E-72 T 26-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 smi_1233 e96732c5d725d75471bc7997c1e6df7e 1058 Hamap MF_01210_A Carbamoyl-phosphate synthase large chain [carB]. 5 1057 13.19 T 26-04-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 smi_1233 e96732c5d725d75471bc7997c1e6df7e 1058 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 830 837 - T 26-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 smi_1233 e96732c5d725d75471bc7997c1e6df7e 1058 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 296 303 - T 26-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 smi_1233 e96732c5d725d75471bc7997c1e6df7e 1058 Gene3D G3DSA:3.30.1490.20 679 737 8.2E-29 T 26-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 smi_1233 e96732c5d725d75471bc7997c1e6df7e 1058 Gene3D G3DSA:3.40.50.20 4 108 1.9E-43 T 26-04-2016 IPR016185 Pre-ATP-grasp domain smi_1233 e96732c5d725d75471bc7997c1e6df7e 1058 SUPERFAMILY SSF48108 395 547 2.35E-50 T 26-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 smi_1233 e96732c5d725d75471bc7997c1e6df7e 1058 Gene3D G3DSA:1.10.1030.10 399 531 5.5E-49 T 26-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 smi_1233 e96732c5d725d75471bc7997c1e6df7e 1058 SMART SM01096 420 540 7.6E-66 T 26-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 smi_1233 e96732c5d725d75471bc7997c1e6df7e 1058 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1047 0.0 T 26-04-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 smi_1233 e96732c5d725d75471bc7997c1e6df7e 1058 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 423 540 8.9E-41 T 26-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 smi_1233 e96732c5d725d75471bc7997c1e6df7e 1058 Gene3D G3DSA:3.30.1490.20 142 199 2.0E-25 T 26-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 smi_1233 e96732c5d725d75471bc7997c1e6df7e 1058 SMART SM00851 949 1036 1.0E-23 T 26-04-2016 IPR011607 Methylglyoxal synthase-like domain smi_1233 e96732c5d725d75471bc7997c1e6df7e 1058 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 333 4.6E-78 T 26-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 smi_1233 e96732c5d725d75471bc7997c1e6df7e 1058 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 666 867 2.1E-37 T 26-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 smi_1820 6622edac3bc4877a63a82b81f71f9958 246 Gene3D G3DSA:3.40.50.300 4 242 7.3E-83 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1820 6622edac3bc4877a63a82b81f71f9958 246 SUPERFAMILY SSF52540 5 240 2.54E-77 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1820 6622edac3bc4877a63a82b81f71f9958 246 SMART SM00382 30 218 5.6E-16 T 26-04-2016 IPR003593 AAA+ ATPase domain smi_1820 6622edac3bc4877a63a82b81f71f9958 246 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 26-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 smi_1820 6622edac3bc4877a63a82b81f71f9958 246 PANTHER PTHR24220 7 246 8.0E-128 T 26-04-2016 smi_1820 6622edac3bc4877a63a82b81f71f9958 246 PIRSF PIRSF039085 2 246 3.3E-110 T 26-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 smi_1820 6622edac3bc4877a63a82b81f71f9958 246 PANTHER PTHR24220:SF327 7 246 8.0E-128 T 26-04-2016 smi_1820 6622edac3bc4877a63a82b81f71f9958 246 Pfam PF00005 ABC transporter 21 170 3.0E-36 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 smi_1962 c25b8b1ef5b9610ddf359b6030ed6afc 177 SUPERFAMILY SSF55811 61 160 2.44E-19 T 26-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 smi_1962 c25b8b1ef5b9610ddf359b6030ed6afc 177 PANTHER PTHR22769 62 171 9.2E-16 T 26-04-2016 smi_1962 c25b8b1ef5b9610ddf359b6030ed6afc 177 ProSitePatterns PS00893 Nudix box signature. 69 90 - T 26-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 smi_1962 c25b8b1ef5b9610ddf359b6030ed6afc 177 Pfam PF00293 NUDIX domain 65 154 4.4E-11 T 26-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 smi_1962 c25b8b1ef5b9610ddf359b6030ed6afc 177 Gene3D G3DSA:3.90.79.10 61 174 9.7E-30 T 26-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 smi_0636 acb31231cbc4e82c2bdde370cc2318a1 240 SMART SM00382 26 216 8.6E-8 T 26-04-2016 IPR003593 AAA+ ATPase domain smi_0636 acb31231cbc4e82c2bdde370cc2318a1 240 Gene3D G3DSA:3.40.50.300 1 229 6.8E-56 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0636 acb31231cbc4e82c2bdde370cc2318a1 240 SUPERFAMILY SSF52540 2 223 8.25E-53 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0636 acb31231cbc4e82c2bdde370cc2318a1 240 Pfam PF00005 ABC transporter 17 161 6.7E-26 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 smi_0636 acb31231cbc4e82c2bdde370cc2318a1 240 PANTHER PTHR24220:SF581 3 233 1.4E-118 T 26-04-2016 smi_0636 acb31231cbc4e82c2bdde370cc2318a1 240 PANTHER PTHR24220 3 233 1.4E-118 T 26-04-2016 smi_0636 acb31231cbc4e82c2bdde370cc2318a1 240 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 26-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 smi_0622 f4e90b244c7a9ed70832519568f9013b 223 PIRSF PIRSF004848 1 223 6.8E-66 T 26-04-2016 IPR011078 Uncharacterised protein family UPF0001 smi_0622 f4e90b244c7a9ed70832519568f9013b 223 SUPERFAMILY SSF51419 1 222 6.28E-69 T 26-04-2016 IPR029066 PLP-binding barrel smi_0622 f4e90b244c7a9ed70832519568f9013b 223 PANTHER PTHR10146 1 222 1.4E-78 T 26-04-2016 IPR011078 Uncharacterised protein family UPF0001 smi_0622 f4e90b244c7a9ed70832519568f9013b 223 Pfam PF01168 Alanine racemase, N-terminal domain 27 222 6.4E-16 T 26-04-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 smi_0622 f4e90b244c7a9ed70832519568f9013b 223 Gene3D G3DSA:3.20.20.10 2 222 1.1E-72 T 26-04-2016 IPR029066 PLP-binding barrel smi_0622 f4e90b244c7a9ed70832519568f9013b 223 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 2 223 1.3E-51 T 26-04-2016 IPR011078 Uncharacterised protein family UPF0001 smi_0658 6692da5ead46604baf46a5dd1f5f1b70 251 SUPERFAMILY SSF52540 4 221 5.99E-58 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0658 6692da5ead46604baf46a5dd1f5f1b70 251 PANTHER PTHR24220 4 248 3.9E-81 T 26-04-2016 smi_0658 6692da5ead46604baf46a5dd1f5f1b70 251 PANTHER PTHR24220:SF309 4 248 3.9E-81 T 26-04-2016 smi_0658 6692da5ead46604baf46a5dd1f5f1b70 251 SMART SM00382 29 212 3.3E-7 T 26-04-2016 IPR003593 AAA+ ATPase domain smi_0658 6692da5ead46604baf46a5dd1f5f1b70 251 Gene3D G3DSA:3.40.50.300 5 243 4.6E-59 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0658 6692da5ead46604baf46a5dd1f5f1b70 251 Pfam PF00005 ABC transporter 18 167 1.6E-34 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 smi_0658 6692da5ead46604baf46a5dd1f5f1b70 251 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 26-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 smi_0033 803440723e72c672fa6ced30d5abfb4c 322 SMART SM01400 6 122 2.7E-79 T 26-04-2016 smi_0033 803440723e72c672fa6ced30d5abfb4c 322 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 7 316 7.2E-120 T 26-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 smi_0033 803440723e72c672fa6ced30d5abfb4c 322 Gene3D G3DSA:3.40.50.2020 162 289 2.1E-50 T 26-04-2016 IPR029057 Phosphoribosyltransferase-like smi_0033 803440723e72c672fa6ced30d5abfb4c 322 Hamap MF_00583_B Ribose-phosphate pyrophosphokinase [prs]. 6 317 50.149 T 26-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 smi_0033 803440723e72c672fa6ced30d5abfb4c 322 SUPERFAMILY SSF53271 71 308 5.7E-62 T 26-04-2016 IPR029057 Phosphoribosyltransferase-like smi_0033 803440723e72c672fa6ced30d5abfb4c 322 PANTHER PTHR10210:SF41 1 322 3.1E-188 T 26-04-2016 smi_0033 803440723e72c672fa6ced30d5abfb4c 322 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 6 122 2.6E-50 T 26-04-2016 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 smi_0033 803440723e72c672fa6ced30d5abfb4c 322 Pfam PF14572 Phosphoribosyl synthetase-associated domain 208 316 1.3E-21 T 26-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 smi_0033 803440723e72c672fa6ced30d5abfb4c 322 PANTHER PTHR10210 1 322 3.1E-188 T 26-04-2016 smi_0033 803440723e72c672fa6ced30d5abfb4c 322 Gene3D G3DSA:3.40.50.2020 3 161 1.8E-74 T 26-04-2016 IPR029057 Phosphoribosyltransferase-like smi_0033 803440723e72c672fa6ced30d5abfb4c 322 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 130 145 - T 26-04-2016 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: REACT_474|UniPathway: UPA00087 smi_2006 71986328e3b94b2d85e1294b97201494 286 SMART SM00942 216 283 7.1E-20 T 26-04-2016 IPR014820 Primase, C-terminal 1 smi_0926 ffa65735d881e54a75f975fb4a33f051 104 SUPERFAMILY SSF141091 4 103 1.16E-35 T 26-04-2016 IPR028909 Ribosomal protein L21-like GO:0005840 smi_0926 ffa65735d881e54a75f975fb4a33f051 104 TIGRFAM TIGR00061 L21: ribosomal protein bL21 4 102 6.7E-35 T 26-04-2016 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_0926 ffa65735d881e54a75f975fb4a33f051 104 Pfam PF00829 Ribosomal prokaryotic L21 protein 4 102 7.6E-36 T 26-04-2016 IPR028909 Ribosomal protein L21-like GO:0005840 smi_0926 ffa65735d881e54a75f975fb4a33f051 104 ProSitePatterns PS01169 Ribosomal protein L21 signature. 73 95 - T 26-04-2016 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_0926 ffa65735d881e54a75f975fb4a33f051 104 PANTHER PTHR21349 4 102 5.9E-40 T 26-04-2016 smi_0926 ffa65735d881e54a75f975fb4a33f051 104 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 3 104 25.049 T 26-04-2016 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_0581 2e482d8514a79d8d936acdf758f4e6b4 121 PANTHER PTHR38445 1 110 5.0E-22 T 26-04-2016 smi_0581 2e482d8514a79d8d936acdf758f4e6b4 121 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 48 64 4.2E-6 T 26-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 smi_0581 2e482d8514a79d8d936acdf758f4e6b4 121 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 34 48 4.2E-6 T 26-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 smi_0581 2e482d8514a79d8d936acdf758f4e6b4 121 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 74 2.0E-16 T 26-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 smi_0581 2e482d8514a79d8d936acdf758f4e6b4 121 SMART SM00345 15 74 7.6E-16 T 26-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 smi_0581 2e482d8514a79d8d936acdf758f4e6b4 121 Gene3D G3DSA:1.10.10.10 2 76 3.1E-25 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain smi_0581 2e482d8514a79d8d936acdf758f4e6b4 121 SUPERFAMILY SSF46785 5 78 2.17E-20 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain smi_0581 2e482d8514a79d8d936acdf758f4e6b4 121 PANTHER PTHR38445:SF2 1 110 5.0E-22 T 26-04-2016 smi_0517 5301de74e7d9d85aaa2bb79334424d88 178 Pfam PF00440 Bacterial regulatory proteins, tetR family 18 61 3.3E-10 T 26-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 smi_0517 5301de74e7d9d85aaa2bb79334424d88 178 Pfam PF14278 Transcriptional regulator C-terminal region 81 156 7.0E-8 T 26-04-2016 smi_0517 5301de74e7d9d85aaa2bb79334424d88 178 SUPERFAMILY SSF46689 5 72 2.14E-17 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 smi_0517 5301de74e7d9d85aaa2bb79334424d88 178 PANTHER PTHR30328:SF20 1 175 5.5E-56 T 26-04-2016 smi_0517 5301de74e7d9d85aaa2bb79334424d88 178 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 36 59 4.7E-5 T 26-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 smi_0517 5301de74e7d9d85aaa2bb79334424d88 178 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 15 28 4.7E-5 T 26-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 smi_0517 5301de74e7d9d85aaa2bb79334424d88 178 PANTHER PTHR30328 1 175 5.5E-56 T 26-04-2016 smi_0517 5301de74e7d9d85aaa2bb79334424d88 178 Gene3D G3DSA:1.10.357.10 10 174 6.1E-25 T 26-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 smi_1252 61c3b0bc3c57d8381490aa0fd63dc651 523 Gene3D G3DSA:3.40.50.300 99 298 9.2E-75 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1252 61c3b0bc3c57d8381490aa0fd63dc651 523 PANTHER PTHR11564:SF7 1 435 1.7E-256 T 26-04-2016 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 smi_1252 61c3b0bc3c57d8381490aa0fd63dc651 523 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 270 283 - T 26-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 smi_1252 61c3b0bc3c57d8381490aa0fd63dc651 523 SMART SM00963 2 87 1.8E-31 T 26-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 smi_1252 61c3b0bc3c57d8381490aa0fd63dc651 523 SUPERFAMILY SSF47446 328 429 3.27E-35 T 26-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 smi_1252 61c3b0bc3c57d8381490aa0fd63dc651 523 Gene3D G3DSA:1.10.260.30 328 430 5.5E-38 T 26-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 smi_1252 61c3b0bc3c57d8381490aa0fd63dc651 523 PANTHER PTHR11564 1 435 1.7E-256 T 26-04-2016 smi_1252 61c3b0bc3c57d8381490aa0fd63dc651 523 Pfam PF02881 SRP54-type protein, helical bundle domain 6 83 6.5E-23 T 26-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 smi_1252 61c3b0bc3c57d8381490aa0fd63dc651 523 Gene3D G3DSA:1.20.120.140 3 90 4.5E-34 T 26-04-2016 smi_1252 61c3b0bc3c57d8381490aa0fd63dc651 523 SMART SM00962 101 297 4.5E-113 T 26-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 smi_1252 61c3b0bc3c57d8381490aa0fd63dc651 523 Pfam PF00448 SRP54-type protein, GTPase domain 101 297 3.6E-75 T 26-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 smi_1252 61c3b0bc3c57d8381490aa0fd63dc651 523 Pfam PF02978 Signal peptide binding domain 328 427 1.7E-31 T 26-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 smi_1252 61c3b0bc3c57d8381490aa0fd63dc651 523 TIGRFAM TIGR00959 ffh: signal recognition particle protein 3 428 1.7E-192 T 26-04-2016 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 smi_1252 61c3b0bc3c57d8381490aa0fd63dc651 523 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 6 468 34.364 T 26-04-2016 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 smi_1252 61c3b0bc3c57d8381490aa0fd63dc651 523 SUPERFAMILY SSF52540 43 355 1.81E-57 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1252 61c3b0bc3c57d8381490aa0fd63dc651 523 SMART SM00382 100 408 2.1E-7 T 26-04-2016 IPR003593 AAA+ ATPase domain smi_0783 97f078127e6aa95fa93ac68af8267e50 166 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 4 162 27.137 T 26-04-2016 IPR022973 Ribosomal protein L10 smi_0783 97f078127e6aa95fa93ac68af8267e50 166 PANTHER PTHR11560 1 165 4.2E-54 T 26-04-2016 smi_0783 97f078127e6aa95fa93ac68af8267e50 166 Pfam PF00466 Ribosomal protein L10 7 102 3.8E-26 T 26-04-2016 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 smi_0783 97f078127e6aa95fa93ac68af8267e50 166 SUPERFAMILY SSF160369 6 161 7.45E-51 T 26-04-2016 smi_0783 97f078127e6aa95fa93ac68af8267e50 166 ProSitePatterns PS01109 Ribosomal protein L10 signature. 9 43 - T 26-04-2016 IPR002363 Ribosomal protein L10, eubacterial, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_1526 8e0c13d11ba5b81871e409e2daf4e838 121 Gene3D G3DSA:3.10.180.10 1 119 1.5E-26 T 26-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase smi_1526 8e0c13d11ba5b81871e409e2daf4e838 121 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 2 116 1.8E-7 T 26-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain smi_1526 8e0c13d11ba5b81871e409e2daf4e838 121 SUPERFAMILY SSF54593 2 121 1.34E-20 T 26-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase smi_1526 8e0c13d11ba5b81871e409e2daf4e838 121 PANTHER PTHR35006 1 119 6.7E-38 T 26-04-2016 smi_1653 2d5c328e369594f177985c3cfa3eb60c 405 PIRSF PIRSF004557 5 405 9.6E-71 T 26-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 smi_1653 2d5c328e369594f177985c3cfa3eb60c 405 SUPERFAMILY SSF103491 10 397 8.37E-64 T 26-04-2016 IPR023201 SecY subunit domain smi_1653 2d5c328e369594f177985c3cfa3eb60c 405 Hamap MF_01466 Accessory Sec system protein translocase subunit SecY2 [secY2]. 1 405 29.051 T 26-04-2016 IPR014269 Accessory Sec system protein translocase subunit SecY2 smi_1653 2d5c328e369594f177985c3cfa3eb60c 405 Pfam PF00344 SecY translocase 64 372 7.3E-42 T 26-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 smi_1653 2d5c328e369594f177985c3cfa3eb60c 405 Gene3D G3DSA:1.10.3370.10 11 404 9.9E-66 T 26-04-2016 IPR023201 SecY subunit domain smi_1653 2d5c328e369594f177985c3cfa3eb60c 405 PANTHER PTHR10906:SF2 14 355 4.8E-27 T 26-04-2016 smi_1653 2d5c328e369594f177985c3cfa3eb60c 405 PANTHER PTHR10906 14 355 4.8E-27 T 26-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 smi_1653 2d5c328e369594f177985c3cfa3eb60c 405 PRINTS PR00303 Preprotein translocase SecY subunit signature 13 31 7.4E-26 T 26-04-2016 smi_1653 2d5c328e369594f177985c3cfa3eb60c 405 PRINTS PR00303 Preprotein translocase SecY subunit signature 131 156 7.4E-26 T 26-04-2016 smi_1653 2d5c328e369594f177985c3cfa3eb60c 405 PRINTS PR00303 Preprotein translocase SecY subunit signature 157 180 7.4E-26 T 26-04-2016 smi_1653 2d5c328e369594f177985c3cfa3eb60c 405 PRINTS PR00303 Preprotein translocase SecY subunit signature 285 307 7.4E-26 T 26-04-2016 smi_1653 2d5c328e369594f177985c3cfa3eb60c 405 PRINTS PR00303 Preprotein translocase SecY subunit signature 63 83 7.4E-26 T 26-04-2016 smi_1653 2d5c328e369594f177985c3cfa3eb60c 405 PRINTS PR00303 Preprotein translocase SecY subunit signature 340 358 7.4E-26 T 26-04-2016 smi_1653 2d5c328e369594f177985c3cfa3eb60c 405 PRINTS PR00303 Preprotein translocase SecY subunit signature 241 260 7.4E-26 T 26-04-2016 smi_1653 2d5c328e369594f177985c3cfa3eb60c 405 TIGRFAM TIGR02920 acc_sec_Y2: accessory Sec system translocase SecY2 8 405 1.2E-162 T 26-04-2016 IPR014269 Accessory Sec system protein translocase subunit SecY2 smi_0778 29dd5b35fd2f8338b409391cd879318c 313 PANTHER PTHR11271:SF7 5 313 6.6E-130 T 26-04-2016 smi_0778 29dd5b35fd2f8338b409391cd879318c 313 SUPERFAMILY SSF51338 259 313 3.6E-12 T 26-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 smi_0778 29dd5b35fd2f8338b409391cd879318c 313 Pfam PF01979 Amidohydrolase family 6 309 1.3E-60 T 26-04-2016 IPR006680 Amidohydrolase-related GO:0016787 smi_0778 29dd5b35fd2f8338b409391cd879318c 313 SUPERFAMILY SSF51556 6 259 5.21E-73 T 26-04-2016 IPR032466 Metal-dependent hydrolase smi_0778 29dd5b35fd2f8338b409391cd879318c 313 Gene3D G3DSA:3.20.20.140 4 275 2.4E-84 T 26-04-2016 smi_0778 29dd5b35fd2f8338b409391cd879318c 313 PANTHER PTHR11271 5 313 6.6E-130 T 26-04-2016 smi_0953 4fc342740949c669acaae8eedc8163bf 334 Gene3D G3DSA:3.40.50.300 109 314 7.7E-88 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0953 4fc342740949c669acaae8eedc8163bf 334 PANTHER PTHR30473:SF1 4 325 5.3E-169 T 26-04-2016 smi_0953 4fc342740949c669acaae8eedc8163bf 334 Pfam PF02562 PhoH-like protein 111 314 2.4E-95 T 26-04-2016 IPR003714 PhoH-like protein GO:0005524 smi_0953 4fc342740949c669acaae8eedc8163bf 334 SUPERFAMILY SSF52540 101 286 1.25E-39 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0953 4fc342740949c669acaae8eedc8163bf 334 PANTHER PTHR30473 4 325 5.3E-169 T 26-04-2016 smi_1456 538210278e58b4dff0eacc31b0ed8e94 73 SUPERFAMILY SSF158379 1 62 1.44E-23 T 26-04-2016 IPR023164 YqgQ-like domain smi_1456 538210278e58b4dff0eacc31b0ed8e94 73 PANTHER PTHR41311 1 73 2.3E-26 T 26-04-2016 smi_1456 538210278e58b4dff0eacc31b0ed8e94 73 Pfam PF06014 Bacterial protein of unknown function (DUF910) 1 60 5.5E-29 T 26-04-2016 IPR009256 Protein of unknown function DUF910 smi_1456 538210278e58b4dff0eacc31b0ed8e94 73 Gene3D G3DSA:1.10.287.760 1 64 2.6E-33 T 26-04-2016 IPR023164 YqgQ-like domain smi_0290 d936e755be8e52a4bc5848396693857c 44 PANTHER PTHR14503 2 44 4.2E-19 T 26-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_0290 d936e755be8e52a4bc5848396693857c 44 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 1 26 2.0E-7 T 26-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_0290 d936e755be8e52a4bc5848396693857c 44 Pfam PF00468 Ribosomal protein L34 2 44 1.5E-22 T 26-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_0290 d936e755be8e52a4bc5848396693857c 44 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 1 44 15.997 T 26-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_0290 d936e755be8e52a4bc5848396693857c 44 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 2 44 5.6E-21 T 26-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_0290 d936e755be8e52a4bc5848396693857c 44 ProSitePatterns PS00784 Ribosomal protein L34 signature. 2 21 - T 26-04-2016 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_1607 361043d79ba15d798c6bdea72fe1c7db 191 SUPERFAMILY SSF116734 13 181 7.19E-23 T 26-04-2016 smi_1607 361043d79ba15d798c6bdea72fe1c7db 191 Pfam PF01420 Type I restriction modification DNA specificity domain 12 165 2.1E-12 T 26-04-2016 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 smi_0203 6195b3f172ae6f90f0f8b816029cff5e 352 SUPERFAMILY SSF50129 1 156 1.02E-54 T 26-04-2016 IPR011032 GroES-like smi_0203 6195b3f172ae6f90f0f8b816029cff5e 352 SUPERFAMILY SSF51735 139 310 1.21E-38 T 26-04-2016 IPR016040 NAD(P)-binding domain smi_0203 6195b3f172ae6f90f0f8b816029cff5e 352 Gene3D G3DSA:3.40.50.720 173 289 2.3E-33 T 26-04-2016 IPR016040 NAD(P)-binding domain smi_0203 6195b3f172ae6f90f0f8b816029cff5e 352 Pfam PF00107 Zinc-binding dehydrogenase 178 305 2.3E-24 T 26-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 smi_0203 6195b3f172ae6f90f0f8b816029cff5e 352 PANTHER PTHR11695 12 348 5.8E-145 T 26-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 smi_0203 6195b3f172ae6f90f0f8b816029cff5e 352 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 129 9.3E-29 T 26-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 smi_0203 6195b3f172ae6f90f0f8b816029cff5e 352 Gene3D G3DSA:3.90.180.10 1 172 3.9E-51 T 26-04-2016 IPR011032 GroES-like smi_0203 6195b3f172ae6f90f0f8b816029cff5e 352 PANTHER PTHR11695:SF559 12 348 5.8E-145 T 26-04-2016 smi_0203 6195b3f172ae6f90f0f8b816029cff5e 352 SMART SM00829 10 345 0.0075 T 26-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 smi_0203 6195b3f172ae6f90f0f8b816029cff5e 352 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 59 73 - T 26-04-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 smi_0109 e3640db5bda4a34d06c947324ab205fc 94 SUPERFAMILY SSF52794 1 89 2.3E-18 T 26-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 smi_0109 e3640db5bda4a34d06c947324ab205fc 94 PANTHER PTHR33843:SF2 1 94 4.0E-39 T 26-04-2016 smi_0109 e3640db5bda4a34d06c947324ab205fc 94 PANTHER PTHR33843 1 94 4.0E-39 T 26-04-2016 smi_0109 e3640db5bda4a34d06c947324ab205fc 94 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 3 84 2.7E-12 T 26-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 smi_0109 e3640db5bda4a34d06c947324ab205fc 94 Gene3D G3DSA:3.40.50.270 1 88 2.8E-11 T 26-04-2016 smi_0903 6ea859a3ae72b3ce4f23b258d7c7422f 124 Pfam PF13508 Acetyltransferase (GNAT) domain 40 114 8.0E-11 T 26-04-2016 IPR000182 GNAT domain GO:0008080 smi_0903 6ea859a3ae72b3ce4f23b258d7c7422f 124 PANTHER PTHR23091 1 118 5.5E-13 T 26-04-2016 smi_0903 6ea859a3ae72b3ce4f23b258d7c7422f 124 Gene3D G3DSA:3.40.630.30 1 117 7.2E-22 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase smi_0903 6ea859a3ae72b3ce4f23b258d7c7422f 124 SUPERFAMILY SSF55729 1 119 3.49E-21 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase smi_1574 a6a9de4caddc1279c461bf0bd4386366 446 TIGRFAM TIGR00796 livcs: branched-chain amino acid transport system II carrier protein 15 423 1.6E-108 T 26-04-2016 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 smi_1574 a6a9de4caddc1279c461bf0bd4386366 446 Pfam PF05525 Branched-chain amino acid transport protein 8 436 4.5E-146 T 26-04-2016 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 smi_1574 a6a9de4caddc1279c461bf0bd4386366 446 PANTHER PTHR30588 2 446 1.6E-291 T 26-04-2016 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 smi_1574 a6a9de4caddc1279c461bf0bd4386366 446 PANTHER PTHR30588:SF2 2 446 1.6E-291 T 26-04-2016 smi_1145 8c5025f8d41142d5fc9365a75b9d60b3 188 Gene3D G3DSA:3.40.30.10 1 187 1.4E-50 T 26-04-2016 IPR012336 Thioredoxin-like fold smi_1145 8c5025f8d41142d5fc9365a75b9d60b3 188 PANTHER PTHR10681:SF68 36 176 4.4E-35 T 26-04-2016 smi_1145 8c5025f8d41142d5fc9365a75b9d60b3 188 Pfam PF00578 AhpC/TSA family 48 168 1.4E-23 T 26-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 smi_1145 8c5025f8d41142d5fc9365a75b9d60b3 188 SUPERFAMILY SSF52833 44 186 3.67E-36 T 26-04-2016 IPR012336 Thioredoxin-like fold smi_1145 8c5025f8d41142d5fc9365a75b9d60b3 188 PANTHER PTHR10681 36 176 4.4E-35 T 26-04-2016 smi_1745 4f77344a9657d0291082a9585279f804 335 Gene3D G3DSA:3.30.70.890 198 332 3.1E-43 T 26-04-2016 IPR013750 GHMP kinase, C-terminal domain smi_1745 4f77344a9657d0291082a9585279f804 335 Pfam PF08544 GHMP kinases C terminal 266 320 1.6E-5 T 26-04-2016 IPR013750 GHMP kinase, C-terminal domain smi_1745 4f77344a9657d0291082a9585279f804 335 Gene3D G3DSA:3.30.230.10 3 191 1.8E-66 T 26-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup smi_1745 4f77344a9657d0291082a9585279f804 335 SUPERFAMILY SSF55060 196 327 3.84E-32 T 26-04-2016 IPR013750 GHMP kinase, C-terminal domain smi_1745 4f77344a9657d0291082a9585279f804 335 TIGRFAM TIGR01220 Pmev_kin_Gr_pos: phosphomevalonate kinase 3 324 7.5E-56 T 26-04-2016 IPR005917 Phosphomevalonate kinase, Gram-positive KEGG: 00900+2.7.4.2|MetaCyc: PWY-7391|MetaCyc: PWY-922|UniPathway: UPA00057 smi_1745 4f77344a9657d0291082a9585279f804 335 SUPERFAMILY SSF54211 1 192 9.11E-48 T 26-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold smi_1745 4f77344a9657d0291082a9585279f804 335 Pfam PF00288 GHMP kinases N terminal domain 101 155 6.8E-9 T 26-04-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 smi_1982 a3511c8909f994a22507ec5cae41170d 616 Gene3D G3DSA:3.90.25.10 470 551 2.0E-5 T 26-04-2016 smi_1982 a3511c8909f994a22507ec5cae41170d 616 Gene3D G3DSA:3.40.50.720 293 469 8.4E-48 T 26-04-2016 IPR016040 NAD(P)-binding domain smi_1982 a3511c8909f994a22507ec5cae41170d 616 Pfam PF02719 Polysaccharide biosynthesis protein 295 575 9.4E-117 T 26-04-2016 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain smi_1982 a3511c8909f994a22507ec5cae41170d 616 PANTHER PTHR10366 294 561 9.8E-113 T 26-04-2016 smi_1982 a3511c8909f994a22507ec5cae41170d 616 Gene3D G3DSA:3.40.50.720 150 244 2.3E-12 T 26-04-2016 IPR016040 NAD(P)-binding domain smi_1982 a3511c8909f994a22507ec5cae41170d 616 SUPERFAMILY SSF51735 292 555 1.16E-58 T 26-04-2016 IPR016040 NAD(P)-binding domain smi_1982 a3511c8909f994a22507ec5cae41170d 616 PANTHER PTHR10366:SF256 294 561 9.8E-113 T 26-04-2016 smi_1982 a3511c8909f994a22507ec5cae41170d 616 SUPERFAMILY SSF51735 153 281 8.27E-12 T 26-04-2016 IPR016040 NAD(P)-binding domain smi_1982 a3511c8909f994a22507ec5cae41170d 616 Pfam PF13727 CoA-binding domain 85 245 1.5E-16 T 26-04-2016 smi_0803 0b34478da9e29cc0dbca839caf33c74c 335 Pfam PF01992 ATP synthase (C/AC39) subunit 9 328 1.6E-36 T 26-04-2016 IPR002843 ATPase, V0 complex, c/d subunit smi_0803 0b34478da9e29cc0dbca839caf33c74c 335 SUPERFAMILY SSF103486 6 331 1.57E-66 T 26-04-2016 IPR002843 ATPase, V0 complex, c/d subunit smi_0803 0b34478da9e29cc0dbca839caf33c74c 335 PANTHER PTHR38682 1 334 1.1E-20 T 26-04-2016 smi_1237 cc365085b648ef1ebcd5905d20255cb9 209 Gene3D G3DSA:1.10.340.30 26 124 2.2E-38 T 26-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 smi_1237 cc365085b648ef1ebcd5905d20255cb9 209 TIGRFAM TIGR01083 nth: endonuclease III 5 197 9.9E-71 T 26-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 smi_1237 cc365085b648ef1ebcd5905d20255cb9 209 Hamap MF_00942 Endonuclease III [nth]. 2 209 35.487 T 26-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 smi_1237 cc365085b648ef1ebcd5905d20255cb9 209 Gene3D G3DSA:1.10.1670.10 125 201 8.5E-30 T 26-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal smi_1237 cc365085b648ef1ebcd5905d20255cb9 209 Pfam PF00633 Helix-hairpin-helix motif 102 129 1.5E-9 T 26-04-2016 IPR000445 Helix-hairpin-helix motif GO:0003677 smi_1237 cc365085b648ef1ebcd5905d20255cb9 209 PANTHER PTHR10359 9 198 9.9E-78 T 26-04-2016 smi_1237 cc365085b648ef1ebcd5905d20255cb9 209 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 36 172 6.5E-24 T 26-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 smi_1237 cc365085b648ef1ebcd5905d20255cb9 209 SUPERFAMILY SSF48150 5 201 4.87E-68 T 26-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 smi_1237 cc365085b648ef1ebcd5905d20255cb9 209 ProSitePatterns PS01155 Endonuclease III family signature. 104 133 - T 26-04-2016 IPR004036 Endonuclease III-like, conserved site-2 Reactome: REACT_216 smi_1237 cc365085b648ef1ebcd5905d20255cb9 209 PIRSF PIRSF001435 1 202 9.4E-48 T 26-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 smi_1237 cc365085b648ef1ebcd5905d20255cb9 209 SMART SM00478 40 188 2.4E-59 T 26-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 smi_0407 3cff0442400dbb03c210b2b6cb028d8f 473 Pfam PF00239 Resolvase, N terminal domain 5 153 1.3E-42 T 26-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 smi_0407 3cff0442400dbb03c210b2b6cb028d8f 473 PANTHER PTHR30461:SF3 4 469 6.7E-75 T 26-04-2016 smi_0407 3cff0442400dbb03c210b2b6cb028d8f 473 ProSitePatterns PS00397 Site-specific recombinases active site. 8 16 - T 26-04-2016 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 smi_0407 3cff0442400dbb03c210b2b6cb028d8f 473 Gene3D G3DSA:3.40.50.1390 4 137 1.1E-34 T 26-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 smi_0407 3cff0442400dbb03c210b2b6cb028d8f 473 SUPERFAMILY SSF53041 4 153 7.32E-39 T 26-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 smi_0407 3cff0442400dbb03c210b2b6cb028d8f 473 PANTHER PTHR30461 4 469 6.7E-75 T 26-04-2016 smi_0407 3cff0442400dbb03c210b2b6cb028d8f 473 Pfam PF13408 Recombinase zinc beta ribbon domain 282 345 3.2E-9 T 26-04-2016 IPR025827 Recombinase zinc beta ribbon domain smi_0407 3cff0442400dbb03c210b2b6cb028d8f 473 Pfam PF07508 Recombinase 177 263 9.7E-16 T 26-04-2016 IPR011109 DNA-binding recombinase domain GO:0000150|GO:0003677 smi_0407 3cff0442400dbb03c210b2b6cb028d8f 473 SMART SM00857 5 154 2.6E-59 T 26-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 smi_0975 7279d5ad45cdc9e6833fef3878f0c3ef 77 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 2 74 6.5E-16 T 26-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 smi_0975 7279d5ad45cdc9e6833fef3878f0c3ef 77 PRINTS PR01651 Protein-export SecG membrane protein signature 55 77 2.65E-5 T 26-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 smi_0975 7279d5ad45cdc9e6833fef3878f0c3ef 77 PRINTS PR01651 Protein-export SecG membrane protein signature 3 23 2.65E-5 T 26-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 smi_0975 7279d5ad45cdc9e6833fef3878f0c3ef 77 Pfam PF03840 Preprotein translocase SecG subunit 4 73 2.0E-14 T 26-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 smi_1207 ada5d0132f3ea8dbc2f5e4d3f4df4f08 272 PANTHER PTHR10000:SF1 1 270 2.9E-125 T 26-04-2016 smi_1207 ada5d0132f3ea8dbc2f5e4d3f4df4f08 272 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 6 236 3.0E-31 T 26-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 smi_1207 ada5d0132f3ea8dbc2f5e4d3f4df4f08 272 Pfam PF08282 haloacid dehalogenase-like hydrolase 7 264 2.0E-61 T 26-04-2016 IPR023214 HAD-like domain smi_1207 ada5d0132f3ea8dbc2f5e4d3f4df4f08 272 Gene3D G3DSA:3.40.50.1000 1 78 1.4E-53 T 26-04-2016 IPR023214 HAD-like domain smi_1207 ada5d0132f3ea8dbc2f5e4d3f4df4f08 272 Gene3D G3DSA:3.40.50.1000 183 270 1.4E-53 T 26-04-2016 IPR023214 HAD-like domain smi_1207 ada5d0132f3ea8dbc2f5e4d3f4df4f08 272 PANTHER PTHR10000 1 270 2.9E-125 T 26-04-2016 smi_1207 ada5d0132f3ea8dbc2f5e4d3f4df4f08 272 SUPERFAMILY SSF56784 2 270 9.47E-70 T 26-04-2016 IPR023214 HAD-like domain smi_1207 ada5d0132f3ea8dbc2f5e4d3f4df4f08 272 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 6 264 1.9E-58 T 26-04-2016 IPR000150 Cof protein GO:0016787 smi_1207 ada5d0132f3ea8dbc2f5e4d3f4df4f08 272 ProSitePatterns PS01228 Hypothetical cof family signature 1. 6 17 - T 26-04-2016 IPR000150 Cof protein GO:0016787 smi_1207 ada5d0132f3ea8dbc2f5e4d3f4df4f08 272 Gene3D G3DSA:3.30.1240.10 89 182 4.4E-18 T 26-04-2016 smi_0207 3c589aeb482c84d1d4d8ef35af72cd7c 107 PANTHER PTHR30093 1 71 5.2E-12 T 26-04-2016 smi_0207 3c589aeb482c84d1d4d8ef35af72cd7c 107 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 11 33 1.6E-6 T 26-04-2016 IPR012902 Prokaryotic N-terminal methylation site smi_0207 3c589aeb482c84d1d4d8ef35af72cd7c 107 SUPERFAMILY SSF54523 16 104 6.12E-13 T 26-04-2016 smi_0207 3c589aeb482c84d1d4d8ef35af72cd7c 107 PRINTS PR00813 Bacterial general secretion pathway protein G signature 15 40 2.6E-9 T 26-04-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 smi_0207 3c589aeb482c84d1d4d8ef35af72cd7c 107 PRINTS PR00813 Bacterial general secretion pathway protein G signature 51 69 2.6E-9 T 26-04-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 smi_0207 3c589aeb482c84d1d4d8ef35af72cd7c 107 PIRSF PIRSF029928 1 107 4.1E-39 T 26-04-2016 IPR016940 ComG operon protein C GO:0030420 smi_0207 3c589aeb482c84d1d4d8ef35af72cd7c 107 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 15 34 1.4E-5 T 26-04-2016 IPR012902 Prokaryotic N-terminal methylation site smi_0731 1fe15ffd8cb0bbf4c02ec4ac5738e44d 434 PANTHER PTHR22807 1 280 3.9E-149 T 26-04-2016 smi_0731 1fe15ffd8cb0bbf4c02ec4ac5738e44d 434 Pfam PF13636 RNA-binding PUA-like domain of methyltransferase RsmF 385 433 2.8E-17 T 26-04-2016 IPR027391 rRNA small subunit methyltransferase F, RNA-binding PUA-like domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 smi_0731 1fe15ffd8cb0bbf4c02ec4ac5738e44d 434 Pfam PF17126 RsmF rRNA methyltransferase first C-terminal domain 307 368 4.5E-21 T 26-04-2016 IPR031340 Ribosomal RNA small subunit methyltransferase F, first C-terminal domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 smi_0731 1fe15ffd8cb0bbf4c02ec4ac5738e44d 434 Pfam PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF 3 81 2.1E-17 T 26-04-2016 IPR031341 Ribosomal RNA small subunit methyltransferase F, N-terminal KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 smi_0731 1fe15ffd8cb0bbf4c02ec4ac5738e44d 434 Gene3D G3DSA:3.40.50.150 79 280 1.4E-56 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase smi_0731 1fe15ffd8cb0bbf4c02ec4ac5738e44d 434 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 67 81 1.17E-21 T 26-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 smi_0731 1fe15ffd8cb0bbf4c02ec4ac5738e44d 434 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 213 229 1.17E-21 T 26-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 smi_0731 1fe15ffd8cb0bbf4c02ec4ac5738e44d 434 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 163 175 1.17E-21 T 26-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 smi_0731 1fe15ffd8cb0bbf4c02ec4ac5738e44d 434 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 264 281 1.17E-21 T 26-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 smi_0731 1fe15ffd8cb0bbf4c02ec4ac5738e44d 434 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 96 106 1.17E-21 T 26-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 smi_0731 1fe15ffd8cb0bbf4c02ec4ac5738e44d 434 SUPERFAMILY SSF53335 2 280 2.13E-64 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase smi_0731 1fe15ffd8cb0bbf4c02ec4ac5738e44d 434 Pfam PF01189 16S rRNA methyltransferase RsmB/F 86 280 8.4E-42 T 26-04-2016 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 smi_0731 1fe15ffd8cb0bbf4c02ec4ac5738e44d 434 PANTHER PTHR22807:SF36 1 280 3.9E-149 T 26-04-2016 smi_0309 be44951fd991a40c16137b570ebcd5e8 314 Pfam PF00512 His Kinase A (phospho-acceptor) domain 144 200 5.7E-12 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 smi_0309 be44951fd991a40c16137b570ebcd5e8 314 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 253 312 9.3E-7 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain smi_0309 be44951fd991a40c16137b570ebcd5e8 314 SUPERFAMILY SSF47384 126 201 1.96E-12 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 smi_0309 be44951fd991a40c16137b570ebcd5e8 314 Gene3D G3DSA:3.30.565.10 215 302 2.4E-11 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain smi_0309 be44951fd991a40c16137b570ebcd5e8 314 SMART SM00388 139 204 2.0E-8 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 smi_0309 be44951fd991a40c16137b570ebcd5e8 314 SUPERFAMILY SSF55874 211 313 1.07E-13 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain smi_0309 be44951fd991a40c16137b570ebcd5e8 314 PANTHER PTHR24423 111 312 6.1E-22 T 26-04-2016 smi_0309 be44951fd991a40c16137b570ebcd5e8 314 PANTHER PTHR24423 49 61 6.1E-22 T 26-04-2016 smi_0309 be44951fd991a40c16137b570ebcd5e8 314 Gene3D G3DSA:1.10.287.130 143 200 2.2E-12 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 smi_0146 c01224ad838d85afc2587ac6c4fdf1a4 225 SUPERFAMILY SSF144091 7 196 4.19E-40 T 26-04-2016 smi_0146 c01224ad838d85afc2587ac6c4fdf1a4 225 PANTHER PTHR22936 11 219 1.0E-37 T 26-04-2016 IPR002610 Peptidase S54, rhomboid GO:0004252|GO:0006508|GO:0016021 smi_0146 c01224ad838d85afc2587ac6c4fdf1a4 225 Gene3D G3DSA:1.20.1540.10 8 190 1.1E-39 T 26-04-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 smi_0146 c01224ad838d85afc2587ac6c4fdf1a4 225 Pfam PF01694 Rhomboid family 55 190 3.8E-35 T 26-04-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 smi_0477 f3161cb5468218f48df98e36ec771cdc 111 TIGRFAM TIGR01673 holin_LLH: phage holin, LL-H family 8 106 5.6E-14 T 26-04-2016 IPR010026 Phage holin, LL-H family smi_0477 f3161cb5468218f48df98e36ec771cdc 111 Pfam PF09682 Bacteriophage holin of superfamily 6 (Holin_LLH) 5 105 6.6E-27 T 26-04-2016 IPR010026 Phage holin, LL-H family smi_1235 156c0389cf9a7ec985789ceac05c41b4 307 PANTHER PTHR11405:SF16 1 304 4.2E-123 T 26-04-2016 smi_1235 156c0389cf9a7ec985789ceac05c41b4 307 PRINTS PR00101 Aspartate carbamoyltransferase signature 78 87 1.1E-29 T 26-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 smi_1235 156c0389cf9a7ec985789ceac05c41b4 307 PRINTS PR00101 Aspartate carbamoyltransferase signature 135 152 1.1E-29 T 26-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 smi_1235 156c0389cf9a7ec985789ceac05c41b4 307 PRINTS PR00101 Aspartate carbamoyltransferase signature 282 296 1.1E-29 T 26-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 smi_1235 156c0389cf9a7ec985789ceac05c41b4 307 PRINTS PR00101 Aspartate carbamoyltransferase signature 40 62 1.1E-29 T 26-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 smi_1235 156c0389cf9a7ec985789ceac05c41b4 307 PRINTS PR00101 Aspartate carbamoyltransferase signature 217 226 1.1E-29 T 26-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 smi_1235 156c0389cf9a7ec985789ceac05c41b4 307 PRINTS PR00101 Aspartate carbamoyltransferase signature 258 263 1.1E-29 T 26-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 smi_1235 156c0389cf9a7ec985789ceac05c41b4 307 Gene3D G3DSA:3.40.50.1370 9 146 2.2E-42 T 26-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 smi_1235 156c0389cf9a7ec985789ceac05c41b4 307 PANTHER PTHR11405 1 304 4.2E-123 T 26-04-2016 smi_1235 156c0389cf9a7ec985789ceac05c41b4 307 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 266 289 7.2E-19 T 26-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 smi_1235 156c0389cf9a7ec985789ceac05c41b4 307 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 50 69 7.2E-19 T 26-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 smi_1235 156c0389cf9a7ec985789ceac05c41b4 307 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 136 147 7.2E-19 T 26-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 smi_1235 156c0389cf9a7ec985789ceac05c41b4 307 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 254 263 7.2E-19 T 26-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 smi_1235 156c0389cf9a7ec985789ceac05c41b4 307 Gene3D G3DSA:3.40.50.1370 147 280 1.6E-45 T 26-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 smi_1235 156c0389cf9a7ec985789ceac05c41b4 307 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 50 57 - T 26-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 smi_1235 156c0389cf9a7ec985789ceac05c41b4 307 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 155 298 3.2E-21 T 26-04-2016 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 smi_1235 156c0389cf9a7ec985789ceac05c41b4 307 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 10 149 5.5E-31 T 26-04-2016 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 smi_1235 156c0389cf9a7ec985789ceac05c41b4 307 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 8 303 38.607 T 26-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 smi_1235 156c0389cf9a7ec985789ceac05c41b4 307 SUPERFAMILY SSF53671 7 302 7.73E-88 T 26-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 smi_1235 156c0389cf9a7ec985789ceac05c41b4 307 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 9 301 1.5E-90 T 26-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 smi_0486 eb499cdb9fd9fcd7f71ec44634d0f39f 177 Gene3D G3DSA:2.40.380.10 4 170 6.7E-44 T 26-04-2016 IPR007295 Domain of unknown function DUF402 smi_0486 eb499cdb9fd9fcd7f71ec44634d0f39f 177 PIRSF PIRSF028345 1 177 3.1E-75 T 26-04-2016 IPR016882 Uncharacterised protein family UPF0374 smi_0486 eb499cdb9fd9fcd7f71ec44634d0f39f 177 Pfam PF04167 Protein of unknown function (DUF402) 60 124 7.3E-16 T 26-04-2016 IPR007295 Domain of unknown function DUF402 smi_0486 eb499cdb9fd9fcd7f71ec44634d0f39f 177 PANTHER PTHR39159 1 176 1.2E-72 T 26-04-2016 smi_0486 eb499cdb9fd9fcd7f71ec44634d0f39f 177 Hamap MF_01568 UPF0374 protein . 1 175 48.354 T 26-04-2016 IPR016882 Uncharacterised protein family UPF0374 smi_0486 eb499cdb9fd9fcd7f71ec44634d0f39f 177 SUPERFAMILY SSF159234 3 170 3.79E-31 T 26-04-2016 smi_0486 eb499cdb9fd9fcd7f71ec44634d0f39f 177 PANTHER PTHR39159:SF1 1 176 1.2E-72 T 26-04-2016 smi_1436 58aa1e243696a973225246097efba53f 226 PANTHER PTHR30614 1 218 7.0E-63 T 26-04-2016 smi_1436 58aa1e243696a973225246097efba53f 226 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 33 213 5.7E-14 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 smi_1436 58aa1e243696a973225246097efba53f 226 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 10 107 4.0E-31 T 26-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 smi_1436 58aa1e243696a973225246097efba53f 226 SUPERFAMILY SSF161098 12 198 9.68E-40 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 smi_1436 58aa1e243696a973225246097efba53f 226 Gene3D G3DSA:1.10.3720.10 11 213 3.8E-39 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 smi_1927 aada47d57989ff6653089c5639097b8c 225 Pfam PF06570 Protein of unknown function (DUF1129) 8 217 8.2E-76 T 26-04-2016 IPR009214 Protein of unknown function DUF1129 smi_1927 aada47d57989ff6653089c5639097b8c 225 PIRSF PIRSF033111 1 225 2.7E-102 T 26-04-2016 IPR009214 Protein of unknown function DUF1129 smi_1885 c09711e3e7789e6cbe385f3758b43a4d 436 PIRSF PIRSF004557 2 435 3.1E-116 T 26-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 smi_1885 c09711e3e7789e6cbe385f3758b43a4d 436 Hamap MF_01465 Protein translocase subunit SecY [secY]. 6 432 26.508 T 26-04-2016 IPR026593 Protein translocase subunit SecY smi_1885 c09711e3e7789e6cbe385f3758b43a4d 436 SUPERFAMILY SSF103491 5 423 3.27E-119 T 26-04-2016 IPR023201 SecY subunit domain smi_1885 c09711e3e7789e6cbe385f3758b43a4d 436 Pfam PF00344 SecY translocase 69 414 6.5E-101 T 26-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 smi_1885 c09711e3e7789e6cbe385f3758b43a4d 436 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 16 428 2.4E-131 T 26-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 smi_1885 c09711e3e7789e6cbe385f3758b43a4d 436 Gene3D G3DSA:1.10.3370.10 6 435 1.2E-132 T 26-04-2016 IPR023201 SecY subunit domain smi_1885 c09711e3e7789e6cbe385f3758b43a4d 436 ProSitePatterns PS00755 Protein secY signature 1. 69 88 - T 26-04-2016 IPR030659 SecY conserved site smi_1885 c09711e3e7789e6cbe385f3758b43a4d 436 PANTHER PTHR10906:SF2 6 434 6.6E-173 T 26-04-2016 smi_1885 c09711e3e7789e6cbe385f3758b43a4d 436 PANTHER PTHR10906 6 434 6.6E-173 T 26-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 smi_1885 c09711e3e7789e6cbe385f3758b43a4d 436 PRINTS PR00303 Preprotein translocase SecY subunit signature 367 385 1.7E-89 T 26-04-2016 smi_1885 c09711e3e7789e6cbe385f3758b43a4d 436 PRINTS PR00303 Preprotein translocase SecY subunit signature 401 419 1.7E-89 T 26-04-2016 smi_1885 c09711e3e7789e6cbe385f3758b43a4d 436 PRINTS PR00303 Preprotein translocase SecY subunit signature 148 173 1.7E-89 T 26-04-2016 smi_1885 c09711e3e7789e6cbe385f3758b43a4d 436 PRINTS PR00303 Preprotein translocase SecY subunit signature 68 88 1.7E-89 T 26-04-2016 smi_1885 c09711e3e7789e6cbe385f3758b43a4d 436 PRINTS PR00303 Preprotein translocase SecY subunit signature 268 287 1.7E-89 T 26-04-2016 smi_1885 c09711e3e7789e6cbe385f3758b43a4d 436 PRINTS PR00303 Preprotein translocase SecY subunit signature 19 37 1.7E-89 T 26-04-2016 smi_1885 c09711e3e7789e6cbe385f3758b43a4d 436 PRINTS PR00303 Preprotein translocase SecY subunit signature 110 133 1.7E-89 T 26-04-2016 smi_1885 c09711e3e7789e6cbe385f3758b43a4d 436 PRINTS PR00303 Preprotein translocase SecY subunit signature 312 334 1.7E-89 T 26-04-2016 smi_1885 c09711e3e7789e6cbe385f3758b43a4d 436 PRINTS PR00303 Preprotein translocase SecY subunit signature 174 197 1.7E-89 T 26-04-2016 smi_1954 ac4360170a1bd382b20b64f8cf136cc0 388 PANTHER PTHR10948 1 372 2.9E-16 T 26-04-2016 smi_1954 ac4360170a1bd382b20b64f8cf136cc0 388 Gene3D G3DSA:3.30.420.10 209 358 9.8E-6 T 26-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 smi_1954 ac4360170a1bd382b20b64f8cf136cc0 388 Pfam PF13936 Helix-turn-helix domain 4 47 1.4E-16 T 26-04-2016 IPR025246 Transposase IS30-like HTH domain smi_1954 ac4360170a1bd382b20b64f8cf136cc0 388 SUPERFAMILY SSF53098 207 358 1.97E-9 T 26-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 smi_1940 2db1655ef523da4052f35a0bc0c7e3b7 189 TIGRFAM TIGR02185 Trep_Strep: putative ECF transporter S component, Trep_Strep family 3 187 8.1E-33 T 26-04-2016 IPR011733 Conserved hypothetical CHP02185, integral membrane smi_1940 2db1655ef523da4052f35a0bc0c7e3b7 189 Pfam PF09605 Hypothetical bacterial integral membrane protein (Trep_Strep) 3 188 8.2E-50 T 26-04-2016 IPR011733 Conserved hypothetical CHP02185, integral membrane smi_0227 bed2f8daac269e72ae3bd7e4eb1fb552 658 ProSitePatterns PS00801 Transketolase signature 1. 10 30 - T 26-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 smi_0227 bed2f8daac269e72ae3bd7e4eb1fb552 658 Pfam PF02780 Transketolase, C-terminal domain 544 649 1.5E-16 T 26-04-2016 IPR033248 Transketolase, C-terminal domain smi_0227 bed2f8daac269e72ae3bd7e4eb1fb552 658 PANTHER PTHR11624:SF1 1 310 0.0 T 26-04-2016 smi_0227 bed2f8daac269e72ae3bd7e4eb1fb552 658 PANTHER PTHR11624:SF1 338 657 0.0 T 26-04-2016 smi_0227 bed2f8daac269e72ae3bd7e4eb1fb552 658 SUPERFAMILY SSF52518 4 321 1.11E-111 T 26-04-2016 IPR029061 Thiamin diphosphate-binding fold smi_0227 bed2f8daac269e72ae3bd7e4eb1fb552 658 ProSitePatterns PS00802 Transketolase signature 2. 464 480 - T 26-04-2016 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 smi_0227 bed2f8daac269e72ae3bd7e4eb1fb552 658 TIGRFAM TIGR00232 tktlase_bact: transketolase 5 657 2.8E-281 T 26-04-2016 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 smi_0227 bed2f8daac269e72ae3bd7e4eb1fb552 658 Gene3D G3DSA:3.40.50.920 533 657 2.5E-48 T 26-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 smi_0227 bed2f8daac269e72ae3bd7e4eb1fb552 658 Gene3D G3DSA:3.40.50.970 339 527 7.3E-70 T 26-04-2016 IPR029061 Thiamin diphosphate-binding fold smi_0227 bed2f8daac269e72ae3bd7e4eb1fb552 658 Gene3D G3DSA:3.40.50.970 5 322 8.8E-121 T 26-04-2016 IPR029061 Thiamin diphosphate-binding fold smi_0227 bed2f8daac269e72ae3bd7e4eb1fb552 658 SUPERFAMILY SSF52518 343 522 1.45E-61 T 26-04-2016 IPR029061 Thiamin diphosphate-binding fold smi_0227 bed2f8daac269e72ae3bd7e4eb1fb552 658 SUPERFAMILY SSF52922 527 657 3.27E-41 T 26-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 smi_0227 bed2f8daac269e72ae3bd7e4eb1fb552 658 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 3 334 1.5E-157 T 26-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 smi_0227 bed2f8daac269e72ae3bd7e4eb1fb552 658 SMART SM00861 351 522 1.0E-64 T 26-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain smi_0227 bed2f8daac269e72ae3bd7e4eb1fb552 658 Pfam PF02779 Transketolase, pyrimidine binding domain 352 521 1.5E-44 T 26-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain smi_0227 bed2f8daac269e72ae3bd7e4eb1fb552 658 PANTHER PTHR11624 1 310 0.0 T 26-04-2016 IPR033247 Transketolase family smi_0227 bed2f8daac269e72ae3bd7e4eb1fb552 658 PANTHER PTHR11624 338 657 0.0 T 26-04-2016 IPR033247 Transketolase family smi_1550 262dfc417b28f139a8d152226b046775 450 SUPERFAMILY SSF55957 357 447 6.15E-25 T 26-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 smi_1550 262dfc417b28f139a8d152226b046775 450 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 373 443 3.5E-16 T 26-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 smi_1550 262dfc417b28f139a8d152226b046775 450 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 5 444 4.6E-199 T 26-04-2016 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 smi_1550 262dfc417b28f139a8d152226b046775 450 SUPERFAMILY SSF53738 257 365 3.92E-32 T 26-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 smi_1550 262dfc417b28f139a8d152226b046775 450 PANTHER PTHR22573:SF15 1 448 1.8E-168 T 26-04-2016 smi_1550 262dfc417b28f139a8d152226b046775 450 SUPERFAMILY SSF53738 3 178 2.0E-42 T 26-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 smi_1550 262dfc417b28f139a8d152226b046775 450 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 172 253 1.0E-14 T 26-04-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 smi_1550 262dfc417b28f139a8d152226b046775 450 SUPERFAMILY SSF53738 165 256 1.49E-23 T 26-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 smi_1550 262dfc417b28f139a8d152226b046775 450 Gene3D G3DSA:3.40.120.10 3 151 1.0E-46 T 26-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 smi_1550 262dfc417b28f139a8d152226b046775 450 Gene3D G3DSA:3.40.120.10 250 368 2.3E-39 T 26-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 smi_1550 262dfc417b28f139a8d152226b046775 450 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 3 136 2.1E-42 T 26-04-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 smi_1550 262dfc417b28f139a8d152226b046775 450 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 1 446 44.219 T 26-04-2016 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 smi_1550 262dfc417b28f139a8d152226b046775 450 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 173 192 4.0E-12 T 26-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 smi_1550 262dfc417b28f139a8d152226b046775 450 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 94 108 4.0E-12 T 26-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 smi_1550 262dfc417b28f139a8d152226b046775 450 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 233 248 4.0E-12 T 26-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 smi_1550 262dfc417b28f139a8d152226b046775 450 Gene3D G3DSA:3.30.310.50 369 445 2.4E-21 T 26-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 smi_1550 262dfc417b28f139a8d152226b046775 450 PANTHER PTHR22573 1 448 1.8E-168 T 26-04-2016 smi_1550 262dfc417b28f139a8d152226b046775 450 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 257 366 2.9E-33 T 26-04-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 smi_1550 262dfc417b28f139a8d152226b046775 450 Gene3D G3DSA:3.40.120.10 175 249 2.1E-21 T 26-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 smi_1550 262dfc417b28f139a8d152226b046775 450 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 95 104 - T 26-04-2016 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 smi_0712 a4a168ed0058a78a92124ba6ec2e070c 286 PANTHER PTHR30213 1 280 1.6E-39 T 26-04-2016 smi_0712 a4a168ed0058a78a92124ba6ec2e070c 286 PIRSF PIRSF035875 1 282 2.2E-54 T 26-04-2016 IPR017039 Virulence factor BrkB smi_0712 a4a168ed0058a78a92124ba6ec2e070c 286 PANTHER PTHR30213:SF1 1 280 1.6E-39 T 26-04-2016 smi_0712 a4a168ed0058a78a92124ba6ec2e070c 286 Pfam PF03631 Virulence factor BrkB 25 276 7.3E-44 T 26-04-2016 IPR017039 Virulence factor BrkB smi_0336 c83e4a422a04a93a40bc1b64fdc3097d 246 Gene3D G3DSA:1.10.443.10 110 245 1.9E-16 T 26-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 smi_0336 c83e4a422a04a93a40bc1b64fdc3097d 246 Hamap MF_01817 Tyrosine recombinase XerD-like. 3 246 39.143 T 26-04-2016 IPR020876 Tyrosine recombinase XerD-like GO:0005737 smi_0336 c83e4a422a04a93a40bc1b64fdc3097d 246 PANTHER PTHR30349:SF5 3 245 7.1E-22 T 26-04-2016 smi_0336 c83e4a422a04a93a40bc1b64fdc3097d 246 Pfam PF00589 Phage integrase family 98 245 6.9E-11 T 26-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 smi_0336 c83e4a422a04a93a40bc1b64fdc3097d 246 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 9 78 1.0E-5 T 26-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 smi_0336 c83e4a422a04a93a40bc1b64fdc3097d 246 PANTHER PTHR30349 3 245 7.1E-22 T 26-04-2016 smi_0336 c83e4a422a04a93a40bc1b64fdc3097d 246 SUPERFAMILY SSF56349 4 245 1.8E-20 T 26-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 smi_0336 c83e4a422a04a93a40bc1b64fdc3097d 246 Gene3D G3DSA:1.10.150.130 6 81 3.1E-8 T 26-04-2016 IPR023109 Integrase/recombinase, N-terminal smi_0961 0b031876bff4986ea283d2a85afa9f55 119 PANTHER PTHR10986 2 117 1.2E-64 T 26-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 smi_0961 0b031876bff4986ea283d2a85afa9f55 119 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 23 70 1.0E-13 T 26-04-2016 smi_0961 0b031876bff4986ea283d2a85afa9f55 119 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 26-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 smi_0961 0b031876bff4986ea283d2a85afa9f55 119 SUPERFAMILY SSF74731 3 116 2.09E-49 T 26-04-2016 smi_0961 0b031876bff4986ea283d2a85afa9f55 119 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 1.3E-50 T 26-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 smi_0961 0b031876bff4986ea283d2a85afa9f55 119 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 30.447 T 26-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 smi_0961 0b031876bff4986ea283d2a85afa9f55 119 Gene3D G3DSA:1.10.1900.20 55 117 5.0E-32 T 26-04-2016 smi_0961 0b031876bff4986ea283d2a85afa9f55 119 PANTHER PTHR10986:SF12 2 117 1.2E-64 T 26-04-2016 smi_0961 0b031876bff4986ea283d2a85afa9f55 119 Pfam PF00453 Ribosomal protein L20 3 109 2.4E-49 T 26-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 smi_0961 0b031876bff4986ea283d2a85afa9f55 119 PRINTS PR00062 Ribosomal protein L20 signature 42 71 3.7E-41 T 26-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 smi_0961 0b031876bff4986ea283d2a85afa9f55 119 PRINTS PR00062 Ribosomal protein L20 signature 75 101 3.7E-41 T 26-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 smi_0961 0b031876bff4986ea283d2a85afa9f55 119 PRINTS PR00062 Ribosomal protein L20 signature 12 41 3.7E-41 T 26-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 smi_0076 45a11d25c77da93138436f10ca023040 431 PRINTS PR00145 Argininosuccinate lyase family signature 216 240 3.5E-9 T 26-04-2016 smi_0076 45a11d25c77da93138436f10ca023040 431 PRINTS PR00145 Argininosuccinate lyase family signature 261 277 3.5E-9 T 26-04-2016 smi_0076 45a11d25c77da93138436f10ca023040 431 PRINTS PR00145 Argininosuccinate lyase family signature 128 148 3.5E-9 T 26-04-2016 smi_0076 45a11d25c77da93138436f10ca023040 431 Gene3D G3DSA:1.10.275.10 2 90 1.4E-36 T 26-04-2016 IPR024083 Fumarase/histidase, N-terminal smi_0076 45a11d25c77da93138436f10ca023040 431 Gene3D G3DSA:1.20.200.10 91 356 5.0E-89 T 26-04-2016 smi_0076 45a11d25c77da93138436f10ca023040 431 Pfam PF00206 Lyase 7 286 4.0E-69 T 26-04-2016 IPR022761 Fumarate lyase, N-terminal smi_0076 45a11d25c77da93138436f10ca023040 431 PANTHER PTHR11444 4 424 7.1E-172 T 26-04-2016 IPR000362 Fumarate lyase family smi_0076 45a11d25c77da93138436f10ca023040 431 Gene3D G3DSA:1.10.40.30 357 428 2.2E-32 T 26-04-2016 smi_0076 45a11d25c77da93138436f10ca023040 431 Pfam PF10397 Adenylosuccinate lyase C-terminus 350 427 2.2E-23 T 26-04-2016 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 smi_0076 45a11d25c77da93138436f10ca023040 431 ProSitePatterns PS00163 Fumarate lyases signature. 261 270 - T 26-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 smi_0076 45a11d25c77da93138436f10ca023040 431 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 1 428 1.5E-169 T 26-04-2016 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 smi_0076 45a11d25c77da93138436f10ca023040 431 PANTHER PTHR11444:SF2 4 424 7.1E-172 T 26-04-2016 smi_0076 45a11d25c77da93138436f10ca023040 431 SUPERFAMILY SSF48557 3 427 4.08E-136 T 26-04-2016 IPR008948 L-Aspartase-like GO:0003824 smi_0076 45a11d25c77da93138436f10ca023040 431 SMART SM00998 349 429 2.2E-38 T 26-04-2016 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 smi_0076 45a11d25c77da93138436f10ca023040 431 PRINTS PR00149 Fumarate lyase superfamily signature 88 106 1.3E-25 T 26-04-2016 IPR000362 Fumarate lyase family smi_0076 45a11d25c77da93138436f10ca023040 431 PRINTS PR00149 Fumarate lyase superfamily signature 261 277 1.3E-25 T 26-04-2016 IPR000362 Fumarate lyase family smi_0076 45a11d25c77da93138436f10ca023040 431 PRINTS PR00149 Fumarate lyase superfamily signature 133 151 1.3E-25 T 26-04-2016 IPR000362 Fumarate lyase family smi_0076 45a11d25c77da93138436f10ca023040 431 PRINTS PR00149 Fumarate lyase superfamily signature 216 243 1.3E-25 T 26-04-2016 IPR000362 Fumarate lyase family smi_1203 bc0b0ee31412b3d19f3ba9aee9ccb654 721 PANTHER PTHR30614 267 720 2.5E-302 T 26-04-2016 smi_1203 bc0b0ee31412b3d19f3ba9aee9ccb654 721 SMART SM00062 268 489 5.3E-52 T 26-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF smi_1203 bc0b0ee31412b3d19f3ba9aee9ccb654 721 SMART SM00062 25 247 7.5E-43 T 26-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF smi_1203 bc0b0ee31412b3d19f3ba9aee9ccb654 721 SUPERFAMILY SSF53850 1 244 2.08E-59 T 26-04-2016 smi_1203 bc0b0ee31412b3d19f3ba9aee9ccb654 721 Gene3D G3DSA:3.40.190.10 268 354 1.9E-38 T 26-04-2016 smi_1203 bc0b0ee31412b3d19f3ba9aee9ccb654 721 Gene3D G3DSA:3.40.190.10 448 489 1.9E-38 T 26-04-2016 smi_1203 bc0b0ee31412b3d19f3ba9aee9ccb654 721 Gene3D G3DSA:3.40.190.10 23 111 1.2E-36 T 26-04-2016 smi_1203 bc0b0ee31412b3d19f3ba9aee9ccb654 721 Gene3D G3DSA:3.40.190.10 205 246 1.2E-36 T 26-04-2016 smi_1203 bc0b0ee31412b3d19f3ba9aee9ccb654 721 SUPERFAMILY SSF53850 270 486 4.3E-60 T 26-04-2016 smi_1203 bc0b0ee31412b3d19f3ba9aee9ccb654 721 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 533 720 2.2E-24 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 smi_1203 bc0b0ee31412b3d19f3ba9aee9ccb654 721 Gene3D G3DSA:3.40.190.10 112 204 8.9E-25 T 26-04-2016 smi_1203 bc0b0ee31412b3d19f3ba9aee9ccb654 721 Gene3D G3DSA:3.40.190.10 355 447 7.7E-27 T 26-04-2016 smi_1203 bc0b0ee31412b3d19f3ba9aee9ccb654 721 PANTHER PTHR30614:SF0 267 720 2.5E-302 T 26-04-2016 smi_1203 bc0b0ee31412b3d19f3ba9aee9ccb654 721 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 511 615 1.3E-21 T 26-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 smi_1203 bc0b0ee31412b3d19f3ba9aee9ccb654 721 SMART SM00079 25 246 1.7E-4 T 26-04-2016 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 smi_1203 bc0b0ee31412b3d19f3ba9aee9ccb654 721 Gene3D G3DSA:1.10.3720.10 499 720 3.3E-65 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 smi_1203 bc0b0ee31412b3d19f3ba9aee9ccb654 721 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 26 244 6.8E-55 T 26-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF smi_1203 bc0b0ee31412b3d19f3ba9aee9ccb654 721 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 270 486 2.0E-56 T 26-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF smi_1203 bc0b0ee31412b3d19f3ba9aee9ccb654 721 SUPERFAMILY SSF161098 513 715 1.23E-45 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 smi_1823 3bc9406fbecec7e418bb8bfb93b0548b 340 SUPERFAMILY SSF48179 184 331 1.55E-67 T 26-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 smi_1823 3bc9406fbecec7e418bb8bfb93b0548b 340 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 184 326 3.0E-64 T 26-04-2016 IPR000506 Acetohydroxy acid isomeroreductase C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 smi_1823 3bc9406fbecec7e418bb8bfb93b0548b 340 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 16 178 1.0E-75 T 26-04-2016 IPR013116 Acetohydroxy acid isomeroreductase, NADPH-binding domain KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 smi_1823 3bc9406fbecec7e418bb8bfb93b0548b 340 SUPERFAMILY SSF51735 4 183 3.01E-69 T 26-04-2016 IPR016040 NAD(P)-binding domain smi_1823 3bc9406fbecec7e418bb8bfb93b0548b 340 Gene3D G3DSA:1.10.1040.10 31 326 1.2E-111 T 26-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 smi_1823 3bc9406fbecec7e418bb8bfb93b0548b 340 PANTHER PTHR21371 7 338 6.8E-190 T 26-04-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 smi_1823 3bc9406fbecec7e418bb8bfb93b0548b 340 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 16 327 2.7E-134 T 26-04-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 smi_1823 3bc9406fbecec7e418bb8bfb93b0548b 340 Hamap MF_00435 Ketol-acid reductoisomerase [ilvC]. 3 329 44.174 T 26-04-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 smi_0920 38c72ae2a0c83d2805c902abc7fc267c 413 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 293 394 1.7E-17 T 26-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 smi_0920 38c72ae2a0c83d2805c902abc7fc267c 413 PANTHER PTHR21581:SF11 4 367 5.3E-127 T 26-04-2016 smi_0920 38c72ae2a0c83d2805c902abc7fc267c 413 Gene3D G3DSA:2.60.410.10 295 394 1.1E-31 T 26-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 smi_0920 38c72ae2a0c83d2805c902abc7fc267c 413 Gene3D G3DSA:3.40.710.10 20 291 1.5E-90 T 26-04-2016 IPR012338 Beta-lactamase/transpeptidase-like smi_0920 38c72ae2a0c83d2805c902abc7fc267c 413 PANTHER PTHR21581 4 367 5.3E-127 T 26-04-2016 smi_0920 38c72ae2a0c83d2805c902abc7fc267c 413 SMART SM00936 293 394 2.8E-19 T 26-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 smi_0920 38c72ae2a0c83d2805c902abc7fc267c 413 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 138 151 7.5E-15 T 26-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 smi_0920 38c72ae2a0c83d2805c902abc7fc267c 413 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 111 128 7.5E-15 T 26-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 smi_0920 38c72ae2a0c83d2805c902abc7fc267c 413 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 55 66 7.5E-15 T 26-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 smi_0920 38c72ae2a0c83d2805c902abc7fc267c 413 SUPERFAMILY SSF56601 4 291 1.88E-66 T 26-04-2016 IPR012338 Beta-lactamase/transpeptidase-like smi_0920 38c72ae2a0c83d2805c902abc7fc267c 413 SUPERFAMILY SSF69189 285 402 1.47E-17 T 26-04-2016 IPR015956 Penicillin-binding protein-associated GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 smi_0920 38c72ae2a0c83d2805c902abc7fc267c 413 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 19 269 1.1E-91 T 26-04-2016 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 smi_0603 a0ff57282d0f295772d4647602383566 442 Gene3D G3DSA:3.40.190.10 165 337 8.8E-21 T 26-04-2016 smi_0603 a0ff57282d0f295772d4647602383566 442 PANTHER PTHR30061 1 439 5.2E-55 T 26-04-2016 smi_0603 a0ff57282d0f295772d4647602383566 442 SUPERFAMILY SSF53850 20 439 5.69E-66 T 26-04-2016 smi_0603 a0ff57282d0f295772d4647602383566 442 Gene3D G3DSA:3.40.190.10 338 393 6.3E-32 T 26-04-2016 smi_0603 a0ff57282d0f295772d4647602383566 442 Gene3D G3DSA:3.40.190.10 42 162 6.3E-32 T 26-04-2016 smi_0603 a0ff57282d0f295772d4647602383566 442 Pfam PF01547 Bacterial extracellular solute-binding protein 61 352 5.9E-29 T 26-04-2016 IPR006059 Solute-binding family 1 GO:0005215|GO:0006810 smi_0854 50ecb0b632a1e1a5abb48ec5c4ac5fa7 309 PANTHER PTHR30217 1 308 4.7E-177 T 26-04-2016 smi_0854 50ecb0b632a1e1a5abb48ec5c4ac5fa7 309 SUPERFAMILY SSF102114 14 94 1.06E-5 T 26-04-2016 smi_0854 50ecb0b632a1e1a5abb48ec5c4ac5fa7 309 Gene3D G3DSA:3.20.20.70 12 94 2.6E-4 T 26-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 smi_0854 50ecb0b632a1e1a5abb48ec5c4ac5fa7 309 Pfam PF01136 Peptidase family U32 74 305 2.3E-40 T 26-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- smi_0854 50ecb0b632a1e1a5abb48ec5c4ac5fa7 309 PANTHER PTHR30217:SF7 1 308 4.7E-177 T 26-04-2016 smi_1742 eca1fdab9b966f2d98133ea42d8530d4 332 PIRSF PIRSF037431 1 332 2.2E-119 T 26-04-2016 IPR017202 Sensor histidine kinase LiaS/VraS GO:0000155|GO:0000160|GO:0004673|GO:0016021 smi_1742 eca1fdab9b966f2d98133ea42d8530d4 332 SMART SM00387 236 329 1.9E-5 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain smi_1742 eca1fdab9b966f2d98133ea42d8530d4 332 SUPERFAMILY SSF55874 194 327 2.88E-16 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain smi_1742 eca1fdab9b966f2d98133ea42d8530d4 332 PANTHER PTHR24421 12 332 6.6E-75 T 26-04-2016 smi_1742 eca1fdab9b966f2d98133ea42d8530d4 332 PANTHER PTHR24421:SF1 12 332 6.6E-75 T 26-04-2016 smi_1742 eca1fdab9b966f2d98133ea42d8530d4 332 Pfam PF07730 Histidine kinase 132 200 2.8E-16 T 26-04-2016 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 smi_1742 eca1fdab9b966f2d98133ea42d8530d4 332 Gene3D G3DSA:3.30.565.10 234 329 8.6E-10 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain smi_1742 eca1fdab9b966f2d98133ea42d8530d4 332 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 238 327 3.1E-5 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain smi_1343 ff3c0c423dd0efe72b568a97af982f43 232 SMART SM00866 88 226 7.0E-36 T 26-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 smi_1343 ff3c0c423dd0efe72b568a97af982f43 232 Gene3D G3DSA:1.10.10.10 3 64 2.6E-28 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain smi_1343 ff3c0c423dd0efe72b568a97af982f43 232 SUPERFAMILY SSF64288 55 230 8.64E-46 T 26-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain smi_1343 ff3c0c423dd0efe72b568a97af982f43 232 Gene3D G3DSA:3.40.1410.10 65 231 4.8E-51 T 26-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain smi_1343 ff3c0c423dd0efe72b568a97af982f43 232 PANTHER PTHR11751:SF303 1 70 1.5E-32 T 26-04-2016 smi_1343 ff3c0c423dd0efe72b568a97af982f43 232 PANTHER PTHR11751:SF303 117 140 1.5E-32 T 26-04-2016 smi_1343 ff3c0c423dd0efe72b568a97af982f43 232 Pfam PF07702 UTRA domain 88 226 3.6E-38 T 26-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 smi_1343 ff3c0c423dd0efe72b568a97af982f43 232 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 27 41 3.45E-11 T 26-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 smi_1343 ff3c0c423dd0efe72b568a97af982f43 232 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 41 57 3.45E-11 T 26-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 smi_1343 ff3c0c423dd0efe72b568a97af982f43 232 Pfam PF00392 Bacterial regulatory proteins, gntR family 5 67 8.9E-23 T 26-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 smi_1343 ff3c0c423dd0efe72b568a97af982f43 232 SMART SM00345 8 67 8.8E-26 T 26-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 smi_1343 ff3c0c423dd0efe72b568a97af982f43 232 SUPERFAMILY SSF46785 3 71 2.22E-23 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain smi_1343 ff3c0c423dd0efe72b568a97af982f43 232 PANTHER PTHR11751 1 70 1.5E-32 T 26-04-2016 smi_1343 ff3c0c423dd0efe72b568a97af982f43 232 PANTHER PTHR11751 117 140 1.5E-32 T 26-04-2016 smi_1621 87092cae4bb508b24ec47c8eb1bb8a74 252 PANTHER PTHR34390:SF2 1 251 1.0E-91 T 26-04-2016 smi_1621 87092cae4bb508b24ec47c8eb1bb8a74 252 Pfam PF06738 Putative threonine/serine exporter 12 250 7.7E-69 T 26-04-2016 IPR010619 Putative threonine/serine exporter smi_1621 87092cae4bb508b24ec47c8eb1bb8a74 252 PANTHER PTHR34390 1 251 1.0E-91 T 26-04-2016 smi_1920 437caa59bec08d20690d99b6d80e4d2f 88 Pfam PF06135 Bacterial protein of unknown function (DUF965) 5 82 4.3E-36 T 26-04-2016 IPR009309 Uncharacterised protein family UPF0297 smi_1920 437caa59bec08d20690d99b6d80e4d2f 88 PANTHER PTHR40067 2 88 3.1E-45 T 26-04-2016 smi_1920 437caa59bec08d20690d99b6d80e4d2f 88 Hamap MF_01507 UPF0297 protein . 1 84 26.415 T 26-04-2016 IPR009309 Uncharacterised protein family UPF0297 smi_1920 437caa59bec08d20690d99b6d80e4d2f 88 PIRSF PIRSF037258 1 87 1.2E-42 T 26-04-2016 IPR009309 Uncharacterised protein family UPF0297 smi_1684 fa32992908e63b7a5f524db5bad6cf9c 324 SUPERFAMILY SSF53901 3 323 4.2E-62 T 26-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 smi_1684 fa32992908e63b7a5f524db5bad6cf9c 324 Gene3D G3DSA:3.40.47.10 4 160 2.0E-61 T 26-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 smi_1684 fa32992908e63b7a5f524db5bad6cf9c 324 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 2 324 67.23 T 26-04-2016 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 smi_1684 fa32992908e63b7a5f524db5bad6cf9c 324 PANTHER PTHR18919 27 322 1.5E-120 T 26-04-2016 smi_1684 fa32992908e63b7a5f524db5bad6cf9c 324 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 234 323 6.7E-31 T 26-04-2016 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 smi_1684 fa32992908e63b7a5f524db5bad6cf9c 324 PANTHER PTHR18919:SF109 27 322 1.5E-120 T 26-04-2016 smi_1684 fa32992908e63b7a5f524db5bad6cf9c 324 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 4 322 1.7E-106 T 26-04-2016 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 smi_1684 fa32992908e63b7a5f524db5bad6cf9c 324 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 106 183 6.7E-31 T 26-04-2016 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 smi_1684 fa32992908e63b7a5f524db5bad6cf9c 324 Gene3D G3DSA:3.40.47.10 161 322 5.5E-46 T 26-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 smi_0519 8a24980192d4a77fb76e3b1128be9bc8 334 PANTHER PTHR30146 1 334 1.1E-185 T 26-04-2016 smi_0519 8a24980192d4a77fb76e3b1128be9bc8 334 Gene3D G3DSA:1.10.260.40 1 48 1.6E-19 T 26-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 smi_0519 8a24980192d4a77fb76e3b1128be9bc8 334 SMART SM00354 1 72 3.1E-10 T 26-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 smi_0519 8a24980192d4a77fb76e3b1128be9bc8 334 Gene3D G3DSA:3.40.50.2300 165 332 1.3E-43 T 26-04-2016 smi_0519 8a24980192d4a77fb76e3b1128be9bc8 334 SUPERFAMILY SSF53822 74 324 7.26E-44 T 26-04-2016 IPR028082 Periplasmic binding protein-like I smi_0519 8a24980192d4a77fb76e3b1128be9bc8 334 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 1.5E-16 T 26-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 smi_0519 8a24980192d4a77fb76e3b1128be9bc8 334 Gene3D G3DSA:3.40.50.2300 109 164 5.2E-6 T 26-04-2016 smi_0519 8a24980192d4a77fb76e3b1128be9bc8 334 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 26-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 smi_0519 8a24980192d4a77fb76e3b1128be9bc8 334 PANTHER PTHR30146:SF28 1 334 1.1E-185 T 26-04-2016 smi_0519 8a24980192d4a77fb76e3b1128be9bc8 334 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 8.6E-6 T 26-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 smi_0519 8a24980192d4a77fb76e3b1128be9bc8 334 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 8.6E-6 T 26-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 smi_0519 8a24980192d4a77fb76e3b1128be9bc8 334 SUPERFAMILY SSF47413 1 50 3.56E-12 T 26-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 smi_0519 8a24980192d4a77fb76e3b1128be9bc8 334 Pfam PF13377 Periplasmic binding protein-like domain 164 331 4.4E-30 T 26-04-2016 smi_0641 8b945ae323465a4104bac80a53bab05d 87 Gene3D G3DSA:2.60.40.10 24 75 8.2E-5 T 26-04-2016 IPR013783 Immunoglobulin-like fold smi_1080 60dc659ec1488730e6673958813cb834 149 PANTHER PTHR41243:SF1 1 149 2.1E-82 T 26-04-2016 smi_1080 60dc659ec1488730e6673958813cb834 149 SMART SM00731 1 144 5.0E-63 T 26-04-2016 IPR006640 SprT-like smi_1080 60dc659ec1488730e6673958813cb834 149 Hamap MF_00745 Protein SprT-like. 1 144 40.173 T 26-04-2016 IPR023524 Uncharacterised protein family SprT-like smi_1080 60dc659ec1488730e6673958813cb834 149 PANTHER PTHR41243 1 149 2.1E-82 T 26-04-2016 smi_1080 60dc659ec1488730e6673958813cb834 149 Pfam PF10263 SprT-like family 10 141 9.9E-21 T 26-04-2016 IPR006640 SprT-like smi_1701 5654838b3ddec93ebed56f8e8c4a27fc 83 SUPERFAMILY SSF53041 18 79 8.5E-6 T 26-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 smi_1701 5654838b3ddec93ebed56f8e8c4a27fc 83 Gene3D G3DSA:3.40.50.1390 18 79 1.8E-5 T 26-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 smi_1433 3eba58ce1cc569da754df207c08687dc 123 Gene3D G3DSA:2.60.40.420 26 122 1.6E-9 T 26-04-2016 IPR008972 Cupredoxin smi_1433 3eba58ce1cc569da754df207c08687dc 123 Pfam PF13473 Cupredoxin-like domain 14 122 5.5E-23 T 26-04-2016 IPR028096 EfeO-type cupredoxin-like domain smi_1433 3eba58ce1cc569da754df207c08687dc 123 SUPERFAMILY SSF49503 14 122 4.07E-17 T 26-04-2016 IPR008972 Cupredoxin smi_0594 b4ce4e6c32db615c9e215c36a14096ab 671 Pfam PF00271 Helicase conserved C-terminal domain 456 566 1.2E-21 T 26-04-2016 IPR001650 Helicase, C-terminal smi_0594 b4ce4e6c32db615c9e215c36a14096ab 671 Gene3D G3DSA:2.40.50.140 44 120 4.4E-15 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold smi_0594 b4ce4e6c32db615c9e215c36a14096ab 671 Gene3D G3DSA:3.40.50.300 433 615 5.0E-45 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0594 b4ce4e6c32db615c9e215c36a14096ab 671 SMART SM00487 249 444 9.1E-38 T 26-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain smi_0594 b4ce4e6c32db615c9e215c36a14096ab 671 Pfam PF17191 RecG wedge domain 10 158 2.5E-15 T 26-04-2016 IPR033454 RecG, wedge domain smi_0594 b4ce4e6c32db615c9e215c36a14096ab 671 SUPERFAMILY SSF52540 364 624 3.74E-43 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0594 b4ce4e6c32db615c9e215c36a14096ab 671 Gene3D G3DSA:3.40.50.300 239 432 1.4E-62 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0594 b4ce4e6c32db615c9e215c36a14096ab 671 PANTHER PTHR24031 603 666 2.1E-123 T 26-04-2016 smi_0594 b4ce4e6c32db615c9e215c36a14096ab 671 PANTHER PTHR24031 107 140 2.1E-123 T 26-04-2016 smi_0594 b4ce4e6c32db615c9e215c36a14096ab 671 PANTHER PTHR24031 167 266 2.1E-123 T 26-04-2016 smi_0594 b4ce4e6c32db615c9e215c36a14096ab 671 PANTHER PTHR24031 283 580 2.1E-123 T 26-04-2016 smi_0594 b4ce4e6c32db615c9e215c36a14096ab 671 SUPERFAMILY SSF52540 169 430 2.01E-66 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0594 b4ce4e6c32db615c9e215c36a14096ab 671 Pfam PF00270 DEAD/DEAH box helicase 254 409 5.0E-19 T 26-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 smi_0594 b4ce4e6c32db615c9e215c36a14096ab 671 PANTHER PTHR24031:SF249 603 666 2.1E-123 T 26-04-2016 smi_0594 b4ce4e6c32db615c9e215c36a14096ab 671 PANTHER PTHR24031:SF249 107 140 2.1E-123 T 26-04-2016 smi_0594 b4ce4e6c32db615c9e215c36a14096ab 671 PANTHER PTHR24031:SF249 167 266 2.1E-123 T 26-04-2016 smi_0594 b4ce4e6c32db615c9e215c36a14096ab 671 PANTHER PTHR24031:SF249 283 580 2.1E-123 T 26-04-2016 smi_0594 b4ce4e6c32db615c9e215c36a14096ab 671 SMART SM00490 482 567 5.4E-24 T 26-04-2016 IPR001650 Helicase, C-terminal smi_0594 b4ce4e6c32db615c9e215c36a14096ab 671 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 24 642 6.6E-253 T 26-04-2016 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 smi_0594 b4ce4e6c32db615c9e215c36a14096ab 671 SUPERFAMILY SSF50249 1 162 2.23E-31 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold smi_1295 870c1aa52c1dc530dbae66eb974d7fa2 205 SUPERFAMILY SSF53254 1 204 3.93E-49 T 26-04-2016 IPR029033 Histidine phosphatase superfamily smi_1295 870c1aa52c1dc530dbae66eb974d7fa2 205 SMART SM00855 2 160 7.6E-16 T 26-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 smi_1295 870c1aa52c1dc530dbae66eb974d7fa2 205 PANTHER PTHR23029 1 204 3.3E-37 T 26-04-2016 smi_1295 870c1aa52c1dc530dbae66eb974d7fa2 205 PIRSF PIRSF000709 1 176 9.9E-8 T 26-04-2016 smi_1295 870c1aa52c1dc530dbae66eb974d7fa2 205 Gene3D G3DSA:3.40.50.1240 1 204 1.8E-51 T 26-04-2016 IPR029033 Histidine phosphatase superfamily smi_1295 870c1aa52c1dc530dbae66eb974d7fa2 205 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 202 3.6E-47 T 26-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 smi_0683 2861aad4477f07b7c1a3042420310952 411 PANTHER PTHR11730:SF17 1 403 2.8E-165 T 26-04-2016 smi_0683 2861aad4477f07b7c1a3042420310952 411 Gene3D G3DSA:1.10.3430.10 2 384 1.7E-129 T 26-04-2016 IPR029020 Ammonium/urea transporter smi_0683 2861aad4477f07b7c1a3042420310952 411 TIGRFAM TIGR00836 amt: ammonium transporter 7 403 8.5E-129 T 26-04-2016 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 smi_0683 2861aad4477f07b7c1a3042420310952 411 ProSitePatterns PS01219 Ammonium transporters signature. 157 182 - T 26-04-2016 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 smi_0683 2861aad4477f07b7c1a3042420310952 411 SUPERFAMILY SSF111352 2 384 1.96E-119 T 26-04-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 smi_0683 2861aad4477f07b7c1a3042420310952 411 PRINTS PR00342 Rhesus blood group protein signature 196 214 4.4E-5 T 26-04-2016 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 smi_0683 2861aad4477f07b7c1a3042420310952 411 PRINTS PR00342 Rhesus blood group protein signature 316 332 4.4E-5 T 26-04-2016 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 smi_0683 2861aad4477f07b7c1a3042420310952 411 PRINTS PR00342 Rhesus blood group protein signature 101 117 4.4E-5 T 26-04-2016 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 smi_0683 2861aad4477f07b7c1a3042420310952 411 PRINTS PR00342 Rhesus blood group protein signature 227 249 4.4E-5 T 26-04-2016 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 smi_0683 2861aad4477f07b7c1a3042420310952 411 Pfam PF00909 Ammonium Transporter Family 7 403 5.0E-115 T 26-04-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 smi_0683 2861aad4477f07b7c1a3042420310952 411 PANTHER PTHR11730 1 403 2.8E-165 T 26-04-2016 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 smi_1576 2d554bc9f17b983a8c7af5d1b11bd283 192 PANTHER PTHR42160:SF1 1 192 1.8E-101 T 26-04-2016 smi_1576 2d554bc9f17b983a8c7af5d1b11bd283 192 SMART SM00987 27 185 1.4E-21 T 26-04-2016 smi_1576 2d554bc9f17b983a8c7af5d1b11bd283 192 Pfam PF03167 Uracil DNA glycosylase superfamily 32 185 1.5E-19 T 26-04-2016 IPR005122 Uracil-DNA glycosylase-like smi_1576 2d554bc9f17b983a8c7af5d1b11bd283 192 SMART SM00986 27 185 1.4E-21 T 26-04-2016 IPR005122 Uracil-DNA glycosylase-like smi_1576 2d554bc9f17b983a8c7af5d1b11bd283 192 SUPERFAMILY SSF52141 4 191 6.21E-48 T 26-04-2016 IPR005122 Uracil-DNA glycosylase-like smi_1576 2d554bc9f17b983a8c7af5d1b11bd283 192 PANTHER PTHR42160 1 192 1.8E-101 T 26-04-2016 smi_1576 2d554bc9f17b983a8c7af5d1b11bd283 192 Gene3D G3DSA:3.40.470.10 4 191 7.6E-36 T 26-04-2016 IPR005122 Uracil-DNA glycosylase-like smi_1043 7c5e30eb6e6c70ef2ee8ebc93f534e02 719 SUPERFAMILY SSF51998 169 701 6.41E-169 T 26-04-2016 smi_1043 7c5e30eb6e6c70ef2ee8ebc93f534e02 719 Gene3D G3DSA:3.20.70.20 79 291 5.6E-55 T 26-04-2016 smi_1043 7c5e30eb6e6c70ef2ee8ebc93f534e02 719 Gene3D G3DSA:3.20.70.20 344 507 5.6E-55 T 26-04-2016 smi_1043 7c5e30eb6e6c70ef2ee8ebc93f534e02 719 Gene3D G3DSA:3.20.70.20 569 671 5.6E-55 T 26-04-2016 smi_1043 7c5e30eb6e6c70ef2ee8ebc93f534e02 719 PANTHER PTHR11573 7 701 6.1E-229 T 26-04-2016 smi_1043 7c5e30eb6e6c70ef2ee8ebc93f534e02 719 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 96 701 5.2E-148 T 26-04-2016 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 smi_1043 7c5e30eb6e6c70ef2ee8ebc93f534e02 719 SUPERFAMILY SSF48168 22 168 4.58E-38 T 26-04-2016 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 smi_1043 7c5e30eb6e6c70ef2ee8ebc93f534e02 719 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 558 580 - T 26-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 smi_1043 7c5e30eb6e6c70ef2ee8ebc93f534e02 719 PRINTS PR01183 Ribonucleotide reductase large chain signature 569 596 2.7E-21 T 26-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 smi_1043 7c5e30eb6e6c70ef2ee8ebc93f534e02 719 PRINTS PR01183 Ribonucleotide reductase large chain signature 245 264 2.7E-21 T 26-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 smi_1043 7c5e30eb6e6c70ef2ee8ebc93f534e02 719 PRINTS PR01183 Ribonucleotide reductase large chain signature 459 481 2.7E-21 T 26-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 smi_1043 7c5e30eb6e6c70ef2ee8ebc93f534e02 719 PRINTS PR01183 Ribonucleotide reductase large chain signature 376 387 2.7E-21 T 26-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 smi_1043 7c5e30eb6e6c70ef2ee8ebc93f534e02 719 PRINTS PR01183 Ribonucleotide reductase large chain signature 487 510 2.7E-21 T 26-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 smi_1043 7c5e30eb6e6c70ef2ee8ebc93f534e02 719 Pfam PF02867 Ribonucleotide reductase, barrel domain 170 698 1.3E-139 T 26-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 smi_1043 7c5e30eb6e6c70ef2ee8ebc93f534e02 719 Pfam PF08343 Ribonucleotide reductase N-terminal 11 91 1.7E-27 T 26-04-2016 IPR013554 Ribonucleotide reductase N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 smi_1043 7c5e30eb6e6c70ef2ee8ebc93f534e02 719 TIGRFAM TIGR04170 RNR_1b_NrdE: ribonucleoside-diphosphate reductase, class 1b, alpha subunit 10 719 0.0 T 26-04-2016 IPR026459 Ribonucleotide reductase, class 1b, subunit NrdE KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 smi_1043 7c5e30eb6e6c70ef2ee8ebc93f534e02 719 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 94 165 1.0E-8 T 26-04-2016 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 smi_1715 f857a309facd5c2ccbccfdf8b9382b80 507 PANTHER PTHR30461:SF3 5 494 3.8E-52 T 26-04-2016 smi_1715 f857a309facd5c2ccbccfdf8b9382b80 507 SUPERFAMILY SSF53041 7 156 2.62E-36 T 26-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 smi_1715 f857a309facd5c2ccbccfdf8b9382b80 507 Pfam PF07508 Recombinase 177 282 2.9E-26 T 26-04-2016 IPR011109 DNA-binding recombinase domain GO:0000150|GO:0003677 smi_1715 f857a309facd5c2ccbccfdf8b9382b80 507 Pfam PF13408 Recombinase zinc beta ribbon domain 301 359 1.4E-11 T 26-04-2016 IPR025827 Recombinase zinc beta ribbon domain smi_1715 f857a309facd5c2ccbccfdf8b9382b80 507 Pfam PF00239 Resolvase, N terminal domain 8 155 9.3E-34 T 26-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 smi_1715 f857a309facd5c2ccbccfdf8b9382b80 507 Gene3D G3DSA:3.40.50.1390 7 137 1.9E-31 T 26-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 smi_1715 f857a309facd5c2ccbccfdf8b9382b80 507 SMART SM00857 8 157 4.7E-50 T 26-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 smi_1715 f857a309facd5c2ccbccfdf8b9382b80 507 PANTHER PTHR30461 5 494 3.8E-52 T 26-04-2016 smi_1244 d427b63ad350eb05301228f80de3e424 439 Pfam PF00860 Permease family 34 407 1.2E-89 T 26-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 smi_1244 d427b63ad350eb05301228f80de3e424 439 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 29 432 6.4E-112 T 26-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 smi_1244 d427b63ad350eb05301228f80de3e424 439 PANTHER PTHR11119 2 439 1.4E-172 T 26-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 smi_1244 d427b63ad350eb05301228f80de3e424 439 PANTHER PTHR11119:SF49 2 439 1.4E-172 T 26-04-2016 smi_1244 d427b63ad350eb05301228f80de3e424 439 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 356 376 - T 26-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 smi_0755 88db5fa9fa0443b2c91ab6dccdd3165d 225 TIGRFAM TIGR01093 aroD: 3-dehydroquinate dehydratase, type I 3 218 1.4E-47 T 26-04-2016 IPR001381 3-dehydroquinate dehydratase type I GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 smi_0755 88db5fa9fa0443b2c91ab6dccdd3165d 225 PANTHER PTHR21089:SF5 1 223 2.5E-88 T 26-04-2016 smi_0755 88db5fa9fa0443b2c91ab6dccdd3165d 225 SUPERFAMILY SSF51569 2 223 4.39E-64 T 26-04-2016 smi_0755 88db5fa9fa0443b2c91ab6dccdd3165d 225 Hamap MF_00214 3-dehydroquinate dehydratase [aroD]. 2 222 38.077 T 26-04-2016 IPR001381 3-dehydroquinate dehydratase type I GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 smi_0755 88db5fa9fa0443b2c91ab6dccdd3165d 225 Pfam PF01487 Type I 3-dehydroquinase 5 218 1.2E-53 T 26-04-2016 IPR001381 3-dehydroquinate dehydratase type I GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 smi_0755 88db5fa9fa0443b2c91ab6dccdd3165d 225 PANTHER PTHR21089 1 223 2.5E-88 T 26-04-2016 smi_0755 88db5fa9fa0443b2c91ab6dccdd3165d 225 Gene3D G3DSA:3.20.20.70 2 223 5.8E-70 T 26-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 smi_1746 7a4a5f20e9563d0be68bbd728262e775 317 PIRSF PIRSF015950 1 314 1.6E-95 T 26-04-2016 IPR005935 Diphosphomevalonate/phosphomevalonate decarboxylase GO:0008299|GO:0016831 KEGG: 00900+4.1.1.33|MetaCyc: PWY-7391|MetaCyc: PWY-922 smi_1746 7a4a5f20e9563d0be68bbd728262e775 317 PANTHER PTHR10977:SF3 1 297 8.4E-95 T 26-04-2016 smi_1746 7a4a5f20e9563d0be68bbd728262e775 317 Gene3D G3DSA:3.30.70.890 170 299 2.0E-54 T 26-04-2016 IPR013750 GHMP kinase, C-terminal domain smi_1746 7a4a5f20e9563d0be68bbd728262e775 317 Pfam PF00288 GHMP kinases N terminal domain 92 137 2.1E-7 T 26-04-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 smi_1746 7a4a5f20e9563d0be68bbd728262e775 317 PANTHER PTHR10977 1 297 8.4E-95 T 26-04-2016 IPR005935 Diphosphomevalonate/phosphomevalonate decarboxylase GO:0008299|GO:0016831 KEGG: 00900+4.1.1.33|MetaCyc: PWY-7391|MetaCyc: PWY-922 smi_1746 7a4a5f20e9563d0be68bbd728262e775 317 Pfam PF08544 GHMP kinases C terminal 213 298 3.5E-5 T 26-04-2016 IPR013750 GHMP kinase, C-terminal domain smi_1746 7a4a5f20e9563d0be68bbd728262e775 317 TIGRFAM TIGR01240 mevDPdecarb: diphosphomevalonate decarboxylase 7 302 2.9E-124 T 26-04-2016 IPR029765 Diphosphomevalonate decarboxylase GO:0004163|GO:0005829|GO:0019287 KEGG: 00900+4.1.1.33|MetaCyc: PWY-7391|MetaCyc: PWY-922 smi_1746 7a4a5f20e9563d0be68bbd728262e775 317 SUPERFAMILY SSF55060 169 300 6.33E-43 T 26-04-2016 IPR013750 GHMP kinase, C-terminal domain smi_1746 7a4a5f20e9563d0be68bbd728262e775 317 SUPERFAMILY SSF54211 6 174 2.96E-31 T 26-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold smi_1746 7a4a5f20e9563d0be68bbd728262e775 317 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 98 109 - T 26-04-2016 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 smi_1746 7a4a5f20e9563d0be68bbd728262e775 317 Gene3D G3DSA:3.30.230.10 3 169 4.6E-60 T 26-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup smi_1709 a1a86604b5f44e7bbdb4745be8578a08 180 PANTHER PTHR23091 47 168 5.3E-22 T 26-04-2016 smi_1709 a1a86604b5f44e7bbdb4745be8578a08 180 Gene3D G3DSA:3.40.630.30 44 178 9.6E-32 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase smi_1709 a1a86604b5f44e7bbdb4745be8578a08 180 PRINTS PR01754 Streptothricin acetyltransferase signature 145 161 4.7E-33 T 26-04-2016 IPR008125 Streptothricin acetyltransferase smi_1709 a1a86604b5f44e7bbdb4745be8578a08 180 PRINTS PR01754 Streptothricin acetyltransferase signature 100 115 4.7E-33 T 26-04-2016 IPR008125 Streptothricin acetyltransferase smi_1709 a1a86604b5f44e7bbdb4745be8578a08 180 PRINTS PR01754 Streptothricin acetyltransferase signature 167 180 4.7E-33 T 26-04-2016 IPR008125 Streptothricin acetyltransferase smi_1709 a1a86604b5f44e7bbdb4745be8578a08 180 PRINTS PR01754 Streptothricin acetyltransferase signature 124 139 4.7E-33 T 26-04-2016 IPR008125 Streptothricin acetyltransferase smi_1709 a1a86604b5f44e7bbdb4745be8578a08 180 SUPERFAMILY SSF55729 47 157 2.13E-27 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase smi_1709 a1a86604b5f44e7bbdb4745be8578a08 180 Pfam PF00583 Acetyltransferase (GNAT) family 77 154 9.7E-18 T 26-04-2016 IPR000182 GNAT domain GO:0008080 smi_0051 6bffb06fa2e592bdbc91391ea45545a1 389 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 234 247 - T 26-04-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Reactome: REACT_13 smi_0051 6bffb06fa2e592bdbc91391ea45545a1 389 Gene3D G3DSA:3.90.1150.10 256 388 3.8E-41 T 26-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 smi_0051 6bffb06fa2e592bdbc91391ea45545a1 389 SUPERFAMILY SSF53383 6 388 3.95E-106 T 26-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase smi_0051 6bffb06fa2e592bdbc91391ea45545a1 389 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 200 223 7.0E-13 T 26-04-2016 smi_0051 6bffb06fa2e592bdbc91391ea45545a1 389 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 164 188 7.0E-13 T 26-04-2016 smi_0051 6bffb06fa2e592bdbc91391ea45545a1 389 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 93 113 7.0E-13 T 26-04-2016 smi_0051 6bffb06fa2e592bdbc91391ea45545a1 389 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 115 136 7.0E-13 T 26-04-2016 smi_0051 6bffb06fa2e592bdbc91391ea45545a1 389 Gene3D G3DSA:3.40.640.10 44 255 1.5E-65 T 26-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 smi_0051 6bffb06fa2e592bdbc91391ea45545a1 389 PANTHER PTHR11751:SF417 14 386 1.1E-163 T 26-04-2016 smi_0051 6bffb06fa2e592bdbc91391ea45545a1 389 Pfam PF00155 Aminotransferase class I and II 32 382 2.2E-60 T 26-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 smi_0051 6bffb06fa2e592bdbc91391ea45545a1 389 PANTHER PTHR11751 14 386 1.1E-163 T 26-04-2016 smi_0834 3128cf18f85f358452e3fd1a59c2be3e 178 PIRSF PIRSF016661 3 176 4.6E-39 T 26-04-2016 IPR003784 BioY protein GO:0005886|GO:0015225|GO:0015878 smi_0834 3128cf18f85f358452e3fd1a59c2be3e 178 PANTHER PTHR34295:SF1 2 178 1.2E-55 T 26-04-2016 smi_0834 3128cf18f85f358452e3fd1a59c2be3e 178 PANTHER PTHR34295 2 178 1.2E-55 T 26-04-2016 smi_0834 3128cf18f85f358452e3fd1a59c2be3e 178 Pfam PF02632 BioY family 27 164 3.4E-33 T 26-04-2016 IPR003784 BioY protein GO:0005886|GO:0015225|GO:0015878 smi_2024 aa24ca3e4cd2b5f1a95bbe05b7359820 501 Pfam PF01297 Zinc-uptake complex component A periplasmic 31 305 3.6E-80 T 26-04-2016 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 smi_2024 aa24ca3e4cd2b5f1a95bbe05b7359820 501 PANTHER PTHR30477:SF10 4 342 5.1E-112 T 26-04-2016 smi_2024 aa24ca3e4cd2b5f1a95bbe05b7359820 501 PRINTS PR00690 Adhesin family signature 28 46 4.3E-15 T 26-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 smi_2024 aa24ca3e4cd2b5f1a95bbe05b7359820 501 PRINTS PR00690 Adhesin family signature 72 89 4.3E-15 T 26-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 smi_2024 aa24ca3e4cd2b5f1a95bbe05b7359820 501 PRINTS PR00690 Adhesin family signature 59 72 4.3E-15 T 26-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 smi_2024 aa24ca3e4cd2b5f1a95bbe05b7359820 501 PRINTS PR00690 Adhesin family signature 246 264 4.3E-15 T 26-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 smi_2024 aa24ca3e4cd2b5f1a95bbe05b7359820 501 PRINTS PR00690 Adhesin family signature 193 214 4.3E-15 T 26-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 smi_2024 aa24ca3e4cd2b5f1a95bbe05b7359820 501 Gene3D G3DSA:3.40.50.1980 188 306 1.2E-39 T 26-04-2016 smi_2024 aa24ca3e4cd2b5f1a95bbe05b7359820 501 SUPERFAMILY SSF50814 320 501 1.44E-80 T 26-04-2016 IPR011038 Calycin-like smi_2024 aa24ca3e4cd2b5f1a95bbe05b7359820 501 Pfam PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment 322 501 4.9E-84 T 26-04-2016 IPR015304 ZinT domain GO:0008270 smi_2024 aa24ca3e4cd2b5f1a95bbe05b7359820 501 PRINTS PR00691 Adhesin B signature 242 259 5.4E-20 T 26-04-2016 IPR006129 Adhesin B GO:0007155 smi_2024 aa24ca3e4cd2b5f1a95bbe05b7359820 501 PRINTS PR00691 Adhesin B signature 193 210 5.4E-20 T 26-04-2016 IPR006129 Adhesin B GO:0007155 smi_2024 aa24ca3e4cd2b5f1a95bbe05b7359820 501 PRINTS PR00691 Adhesin B signature 72 91 5.4E-20 T 26-04-2016 IPR006129 Adhesin B GO:0007155 smi_2024 aa24ca3e4cd2b5f1a95bbe05b7359820 501 PRINTS PR00691 Adhesin B signature 286 304 5.4E-20 T 26-04-2016 IPR006129 Adhesin B GO:0007155 smi_2024 aa24ca3e4cd2b5f1a95bbe05b7359820 501 PRINTS PR00691 Adhesin B signature 137 156 5.4E-20 T 26-04-2016 IPR006129 Adhesin B GO:0007155 smi_2024 aa24ca3e4cd2b5f1a95bbe05b7359820 501 PRINTS PR00691 Adhesin B signature 53 71 5.4E-20 T 26-04-2016 IPR006129 Adhesin B GO:0007155 smi_2024 aa24ca3e4cd2b5f1a95bbe05b7359820 501 PRINTS PR00691 Adhesin B signature 28 49 5.4E-20 T 26-04-2016 IPR006129 Adhesin B GO:0007155 smi_2024 aa24ca3e4cd2b5f1a95bbe05b7359820 501 PANTHER PTHR30477 4 342 5.1E-112 T 26-04-2016 smi_2024 aa24ca3e4cd2b5f1a95bbe05b7359820 501 SUPERFAMILY SSF53807 14 305 9.32E-88 T 26-04-2016 smi_2024 aa24ca3e4cd2b5f1a95bbe05b7359820 501 Gene3D G3DSA:3.40.50.1980 17 187 1.1E-59 T 26-04-2016 smi_2024 aa24ca3e4cd2b5f1a95bbe05b7359820 501 Gene3D G3DSA:2.40.128.20 316 501 2.6E-88 T 26-04-2016 IPR012674 Calycin smi_0915 247101d7d3579e6c0d9e5be94dd353e9 256 SMART SM00382 28 230 1.9E-6 T 26-04-2016 IPR003593 AAA+ ATPase domain smi_0915 247101d7d3579e6c0d9e5be94dd353e9 256 TIGRFAM TIGR01978 sufC: FeS assembly ATPase SufC 4 243 7.4E-109 T 26-04-2016 IPR010230 FeS cluster assembly SUF system, ATPase SufC GO:0005524|GO:0006810 smi_0915 247101d7d3579e6c0d9e5be94dd353e9 256 PANTHER PTHR24220 5 255 2.4E-131 T 26-04-2016 smi_0915 247101d7d3579e6c0d9e5be94dd353e9 256 Pfam PF00005 ABC transporter 19 171 9.6E-23 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 smi_0915 247101d7d3579e6c0d9e5be94dd353e9 256 SUPERFAMILY SSF52540 3 231 4.62E-42 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0915 247101d7d3579e6c0d9e5be94dd353e9 256 PANTHER PTHR24220:SF85 5 255 2.4E-131 T 26-04-2016 smi_0915 247101d7d3579e6c0d9e5be94dd353e9 256 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 26-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 smi_0915 247101d7d3579e6c0d9e5be94dd353e9 256 Gene3D G3DSA:3.40.50.300 3 237 1.1E-45 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0986 79540d5ef3a75aecf1fcfadf3f95681d 388 Pfam PF13936 Helix-turn-helix domain 4 47 1.4E-16 T 26-04-2016 IPR025246 Transposase IS30-like HTH domain smi_0986 79540d5ef3a75aecf1fcfadf3f95681d 388 PANTHER PTHR10948 1 372 4.3E-15 T 26-04-2016 smi_0986 79540d5ef3a75aecf1fcfadf3f95681d 388 SUPERFAMILY SSF53098 207 358 2.88E-9 T 26-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 smi_0986 79540d5ef3a75aecf1fcfadf3f95681d 388 Gene3D G3DSA:3.30.420.10 209 358 1.3E-5 T 26-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 smi_1507 8b7e344d49c26bb82d16013e95392043 388 TIGRFAM TIGR04350 C_S_lyase_PatB: putative C-S lyase 8 384 7.0E-119 T 26-04-2016 IPR027619 Putative C-S lyase KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8|MetaCyc: PWY-6936 smi_1507 8b7e344d49c26bb82d16013e95392043 388 PANTHER PTHR11751:SF21 5 382 6.2E-131 T 26-04-2016 smi_1507 8b7e344d49c26bb82d16013e95392043 388 PANTHER PTHR11751 5 382 6.2E-131 T 26-04-2016 smi_1507 8b7e344d49c26bb82d16013e95392043 388 Gene3D G3DSA:3.90.1150.10 251 386 9.4E-35 T 26-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 smi_1507 8b7e344d49c26bb82d16013e95392043 388 Gene3D G3DSA:3.40.640.10 43 250 1.8E-50 T 26-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 smi_1507 8b7e344d49c26bb82d16013e95392043 388 Pfam PF00155 Aminotransferase class I and II 54 381 1.5E-45 T 26-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 smi_1507 8b7e344d49c26bb82d16013e95392043 388 SUPERFAMILY SSF53383 4 385 3.19E-91 T 26-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase smi_0158 72c496d4f7e8cda21b794e9ed48ef489 486 PANTHER PTHR11451 263 343 3.1E-100 T 26-04-2016 smi_0158 72c496d4f7e8cda21b794e9ed48ef489 486 PANTHER PTHR11451 4 247 3.1E-100 T 26-04-2016 smi_0158 72c496d4f7e8cda21b794e9ed48ef489 486 Gene3D G3DSA:3.40.50.620 5 69 1.6E-51 T 26-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold smi_0158 72c496d4f7e8cda21b794e9ed48ef489 486 Gene3D G3DSA:3.40.50.620 198 247 1.6E-51 T 26-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold smi_0158 72c496d4f7e8cda21b794e9ed48ef489 486 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 5 482 9.6E-170 T 26-04-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 smi_0158 72c496d4f7e8cda21b794e9ed48ef489 486 Hamap MF_00022_B Glutamate--tRNA ligase [gltX]. 5 481 34.029 T 26-04-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 smi_0158 72c496d4f7e8cda21b794e9ed48ef489 486 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 5 326 5.2E-115 T 26-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 smi_0158 72c496d4f7e8cda21b794e9ed48ef489 486 SUPERFAMILY SSF48163 320 481 9.42E-41 T 26-04-2016 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 smi_0158 72c496d4f7e8cda21b794e9ed48ef489 486 PANTHER PTHR11451:SF41 263 343 3.1E-100 T 26-04-2016 smi_0158 72c496d4f7e8cda21b794e9ed48ef489 486 PANTHER PTHR11451:SF41 4 247 3.1E-100 T 26-04-2016 smi_0158 72c496d4f7e8cda21b794e9ed48ef489 486 Gene3D G3DSA:1.10.10.350 382 481 7.0E-18 T 26-04-2016 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 smi_0158 72c496d4f7e8cda21b794e9ed48ef489 486 PRINTS PR00987 Glutamyl-tRNA synthetase signature 22 33 5.3E-28 T 26-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 smi_0158 72c496d4f7e8cda21b794e9ed48ef489 486 PRINTS PR00987 Glutamyl-tRNA synthetase signature 37 50 5.3E-28 T 26-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 smi_0158 72c496d4f7e8cda21b794e9ed48ef489 486 PRINTS PR00987 Glutamyl-tRNA synthetase signature 196 206 5.3E-28 T 26-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 smi_0158 72c496d4f7e8cda21b794e9ed48ef489 486 PRINTS PR00987 Glutamyl-tRNA synthetase signature 212 220 5.3E-28 T 26-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 smi_0158 72c496d4f7e8cda21b794e9ed48ef489 486 PRINTS PR00987 Glutamyl-tRNA synthetase signature 8 20 5.3E-28 T 26-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 smi_0158 72c496d4f7e8cda21b794e9ed48ef489 486 SUPERFAMILY SSF52374 5 319 3.22E-105 T 26-04-2016 smi_0158 72c496d4f7e8cda21b794e9ed48ef489 486 Gene3D G3DSA:3.90.800.10 70 197 2.3E-34 T 26-04-2016 smi_0158 72c496d4f7e8cda21b794e9ed48ef489 486 Gene3D G3DSA:1.10.1160.10 251 335 5.9E-34 T 26-04-2016 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: REACT_71 smi_0158 72c496d4f7e8cda21b794e9ed48ef489 486 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 11 22 - T 26-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 smi_1121 556dcf0e5aca3a56e48cbb0394769e29 204 Pfam PF13702 Lysozyme-like 29 190 5.1E-59 T 26-04-2016 smi_1121 556dcf0e5aca3a56e48cbb0394769e29 204 PANTHER PTHR34135 1 204 6.5E-90 T 26-04-2016 smi_1121 556dcf0e5aca3a56e48cbb0394769e29 204 SUPERFAMILY SSF53955 33 139 4.87E-9 T 26-04-2016 IPR023346 Lysozyme-like domain smi_1121 556dcf0e5aca3a56e48cbb0394769e29 204 PANTHER PTHR34135:SF3 1 204 6.5E-90 T 26-04-2016 smi_2021 ca2d7a3e7847f7cf8802b15cc6326998 821 Gene3D G3DSA:2.60.40.320 148 276 1.8E-26 T 26-04-2016 IPR013812 Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain GO:0004553|GO:0005975 smi_2021 ca2d7a3e7847f7cf8802b15cc6326998 821 Pfam PF16355 Domain of unknown function (DUF4982) 636 709 9.5E-21 T 26-04-2016 IPR032311 Domain of unknown function DUF4982 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 smi_2021 ca2d7a3e7847f7cf8802b15cc6326998 821 SUPERFAMILY SSF49785 9 158 5.22E-36 T 26-04-2016 IPR008979 Galactose-binding domain-like smi_2021 ca2d7a3e7847f7cf8802b15cc6326998 821 SUPERFAMILY SSF49303 186 275 2.82E-10 T 26-04-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 smi_2021 ca2d7a3e7847f7cf8802b15cc6326998 821 PRINTS PR00132 Glycosyl hydrolase family 2 signature 89 104 6.3E-10 T 26-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 smi_2021 ca2d7a3e7847f7cf8802b15cc6326998 821 PRINTS PR00132 Glycosyl hydrolase family 2 signature 318 336 6.3E-10 T 26-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 smi_2021 ca2d7a3e7847f7cf8802b15cc6326998 821 PRINTS PR00132 Glycosyl hydrolase family 2 signature 400 415 6.3E-10 T 26-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 smi_2021 ca2d7a3e7847f7cf8802b15cc6326998 821 PRINTS PR00132 Glycosyl hydrolase family 2 signature 287 301 6.3E-10 T 26-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 smi_2021 ca2d7a3e7847f7cf8802b15cc6326998 821 PANTHER PTHR10066:SF71 19 516 3.1E-154 T 26-04-2016 smi_2021 ca2d7a3e7847f7cf8802b15cc6326998 821 PANTHER PTHR10066:SF71 548 658 3.1E-154 T 26-04-2016 smi_2021 ca2d7a3e7847f7cf8802b15cc6326998 821 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 29 155 9.4E-24 T 26-04-2016 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 smi_2021 ca2d7a3e7847f7cf8802b15cc6326998 821 PANTHER PTHR10066 19 516 3.1E-154 T 26-04-2016 smi_2021 ca2d7a3e7847f7cf8802b15cc6326998 821 PANTHER PTHR10066 548 658 3.1E-154 T 26-04-2016 smi_2021 ca2d7a3e7847f7cf8802b15cc6326998 821 Gene3D G3DSA:2.60.40.1560 612 725 1.4E-23 T 26-04-2016 smi_2021 ca2d7a3e7847f7cf8802b15cc6326998 821 Pfam PF00703 Glycosyl hydrolases family 2 177 275 1.7E-11 T 26-04-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 smi_2021 ca2d7a3e7847f7cf8802b15cc6326998 821 Gene3D G3DSA:3.20.20.80 281 604 1.8E-69 T 26-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 smi_2021 ca2d7a3e7847f7cf8802b15cc6326998 821 SUPERFAMILY SSF51445 281 603 5.02E-57 T 26-04-2016 IPR017853 Glycoside hydrolase superfamily smi_2021 ca2d7a3e7847f7cf8802b15cc6326998 821 Gene3D G3DSA:2.60.120.260 6 147 8.1E-36 T 26-04-2016 IPR008979 Galactose-binding domain-like smi_2021 ca2d7a3e7847f7cf8802b15cc6326998 821 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 282 490 1.7E-19 T 26-04-2016 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 smi_1785.1 68a0e7cef981e45b653013be04e91228 48 Gene3D G3DSA:1.10.443.10 3 33 1.9E-4 T 26-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 smi_1878 91e8003c917daa8f03d60f605229d384 128 SUPERFAMILY SSF64263 2 128 1.57E-43 T 26-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_1878 91e8003c917daa8f03d60f605229d384 128 PANTHER PTHR14413 1 67 8.5E-57 T 26-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_1878 91e8003c917daa8f03d60f605229d384 128 PANTHER PTHR14413 84 128 8.5E-57 T 26-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_1878 91e8003c917daa8f03d60f605229d384 128 Pfam PF01196 Ribosomal protein L17 16 128 6.1E-40 T 26-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_1878 91e8003c917daa8f03d60f605229d384 128 PANTHER PTHR14413:SF5 1 67 8.5E-57 T 26-04-2016 smi_1878 91e8003c917daa8f03d60f605229d384 128 PANTHER PTHR14413:SF5 84 128 8.5E-57 T 26-04-2016 smi_1878 91e8003c917daa8f03d60f605229d384 128 ProSitePatterns PS01167 Ribosomal protein L17 signature. 30 52 - T 26-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_1878 91e8003c917daa8f03d60f605229d384 128 TIGRFAM TIGR00059 L17: ribosomal protein bL17 3 128 4.4E-48 T 26-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_1878 91e8003c917daa8f03d60f605229d384 128 Gene3D G3DSA:3.90.1030.10 2 128 2.1E-49 T 26-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_1878 91e8003c917daa8f03d60f605229d384 128 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 1 128 27.645 T 26-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_1704 fd2a1e4266c3617f087b8f2bca65e616 479 Pfam PF01636 Phosphotransferase enzyme family 205 439 1.3E-23 T 26-04-2016 IPR002575 Aminoglycoside phosphotransferase smi_1704 fd2a1e4266c3617f087b8f2bca65e616 479 SUPERFAMILY SSF56112 192 432 2.19E-35 T 26-04-2016 IPR011009 Protein kinase-like domain smi_1704 fd2a1e4266c3617f087b8f2bca65e616 479 Pfam PF13523 Acetyltransferase (GNAT) domain 15 156 2.1E-23 T 26-04-2016 smi_1704 fd2a1e4266c3617f087b8f2bca65e616 479 Gene3D G3DSA:3.90.1200.10 277 438 1.7E-24 T 26-04-2016 smi_1704 fd2a1e4266c3617f087b8f2bca65e616 479 SUPERFAMILY SSF55729 3 177 8.68E-33 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase smi_1704 fd2a1e4266c3617f087b8f2bca65e616 479 Gene3D G3DSA:3.40.630.30 2 183 4.9E-38 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase smi_1704 fd2a1e4266c3617f087b8f2bca65e616 479 PANTHER PTHR31438 14 203 1.1E-22 T 26-04-2016 smi_1789 05ea533f2fe4c77a4768ad5efff0a4e9 439 SUPERFAMILY SSF52540 179 393 2.36E-21 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1789 05ea533f2fe4c77a4768ad5efff0a4e9 439 PANTHER PTHR22683:SF44 204 401 3.8E-36 T 26-04-2016 smi_1789 05ea533f2fe4c77a4768ad5efff0a4e9 439 Pfam PF01580 FtsK/SpoIIIE family 187 371 4.8E-15 T 26-04-2016 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 smi_1789 05ea533f2fe4c77a4768ad5efff0a4e9 439 PANTHER PTHR22683 204 401 3.8E-36 T 26-04-2016 smi_1789 05ea533f2fe4c77a4768ad5efff0a4e9 439 Gene3D G3DSA:3.40.50.300 188 434 3.1E-27 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0155 d88ccdca57d88884ef8765be849940ad 229 PANTHER PTHR11922 27 229 1.9E-46 T 26-04-2016 smi_0155 d88ccdca57d88884ef8765be849940ad 229 Pfam PF07722 Peptidase C26 5 209 9.2E-67 T 26-04-2016 IPR011697 Peptidase C26 GO:0006541|GO:0016787 smi_0155 d88ccdca57d88884ef8765be849940ad 229 PANTHER PTHR11922:SF18 27 229 1.9E-46 T 26-04-2016 smi_0155 d88ccdca57d88884ef8765be849940ad 229 Gene3D G3DSA:3.40.50.880 3 228 2.7E-47 T 26-04-2016 IPR029062 Class I glutamine amidotransferase-like smi_0155 d88ccdca57d88884ef8765be849940ad 229 SUPERFAMILY SSF52317 31 218 2.96E-35 T 26-04-2016 IPR029062 Class I glutamine amidotransferase-like smi_1141 311fe0481e9fe7d48bbb5d72d171050e 1327 SUPERFAMILY SSF142887 377 412 4.97E-13 T 26-04-2016 smi_1141 311fe0481e9fe7d48bbb5d72d171050e 1327 Pfam PF04270 Streptococcal histidine triad protein 181 230 2.3E-26 T 26-04-2016 IPR006270 Streptococcal histidine triad repeat smi_1141 311fe0481e9fe7d48bbb5d72d171050e 1327 Pfam PF04270 Streptococcal histidine triad protein 443 491 3.5E-15 T 26-04-2016 IPR006270 Streptococcal histidine triad repeat smi_1141 311fe0481e9fe7d48bbb5d72d171050e 1327 Pfam PF04270 Streptococcal histidine triad protein 71 89 9.8E-4 T 26-04-2016 IPR006270 Streptococcal histidine triad repeat smi_1141 311fe0481e9fe7d48bbb5d72d171050e 1327 Pfam PF04270 Streptococcal histidine triad protein 816 834 0.0069 T 26-04-2016 IPR006270 Streptococcal histidine triad repeat smi_1141 311fe0481e9fe7d48bbb5d72d171050e 1327 Pfam PF04270 Streptococcal histidine triad protein 286 329 7.4E-15 T 26-04-2016 IPR006270 Streptococcal histidine triad repeat smi_1141 311fe0481e9fe7d48bbb5d72d171050e 1327 Pfam PF04270 Streptococcal histidine triad protein 522 565 7.6E-13 T 26-04-2016 IPR006270 Streptococcal histidine triad repeat smi_1141 311fe0481e9fe7d48bbb5d72d171050e 1327 Pfam PF04270 Streptococcal histidine triad protein 593 638 1.6E-12 T 26-04-2016 IPR006270 Streptococcal histidine triad repeat smi_1141 311fe0481e9fe7d48bbb5d72d171050e 1327 Pfam PF04270 Streptococcal histidine triad protein 378 411 1.6E-14 T 26-04-2016 IPR006270 Streptococcal histidine triad repeat smi_1141 311fe0481e9fe7d48bbb5d72d171050e 1327 Pfam PF04270 Streptococcal histidine triad protein 669 711 3.1E-13 T 26-04-2016 IPR006270 Streptococcal histidine triad repeat smi_1141 311fe0481e9fe7d48bbb5d72d171050e 1327 SUPERFAMILY SSF142887 441 491 1.31E-12 T 26-04-2016 smi_1141 311fe0481e9fe7d48bbb5d72d171050e 1327 SUPERFAMILY SSF142887 178 229 3.14E-19 T 26-04-2016 smi_1141 311fe0481e9fe7d48bbb5d72d171050e 1327 TIGRFAM TIGR01363 strep_his_triad: streptococcal histidine triad protein 368 412 4.7E-13 T 26-04-2016 IPR023832 Histidine triad protein smi_1141 311fe0481e9fe7d48bbb5d72d171050e 1327 TIGRFAM TIGR01363 strep_his_triad: streptococcal histidine triad protein 1 329 1.8E-148 T 26-04-2016 IPR023832 Histidine triad protein smi_1141 311fe0481e9fe7d48bbb5d72d171050e 1327 SUPERFAMILY SSF142887 659 710 4.71E-10 T 26-04-2016 smi_1141 311fe0481e9fe7d48bbb5d72d171050e 1327 SUPERFAMILY SSF142887 282 332 7.85E-17 T 26-04-2016 smi_1141 311fe0481e9fe7d48bbb5d72d171050e 1327 SUPERFAMILY SSF142887 586 638 3.53E-11 T 26-04-2016 smi_1141 311fe0481e9fe7d48bbb5d72d171050e 1327 SUPERFAMILY SSF142887 514 564 5.23E-10 T 26-04-2016 smi_0118 f93f2a07672e956f0e73312ef197e61e 429 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 1 423 33.883 T 26-04-2016 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21|Reactome: REACT_71 smi_0118 f93f2a07672e956f0e73312ef197e61e 429 Gene3D G3DSA:3.40.50.800 326 417 3.1E-28 T 26-04-2016 IPR004154 Anticodon-binding smi_0118 f93f2a07672e956f0e73312ef197e61e 429 SUPERFAMILY SSF52954 328 419 1.03E-23 T 26-04-2016 IPR004154 Anticodon-binding smi_0118 f93f2a07672e956f0e73312ef197e61e 429 SUPERFAMILY SSF55681 3 320 5.55E-100 T 26-04-2016 smi_0118 f93f2a07672e956f0e73312ef197e61e 429 Gene3D G3DSA:3.30.930.10 1 185 6.0E-99 T 26-04-2016 smi_0118 f93f2a07672e956f0e73312ef197e61e 429 Gene3D G3DSA:3.30.930.10 221 321 6.0E-99 T 26-04-2016 smi_0118 f93f2a07672e956f0e73312ef197e61e 429 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 4 409 1.2E-155 T 26-04-2016 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21|Reactome: REACT_71 smi_0118 f93f2a07672e956f0e73312ef197e61e 429 PANTHER PTHR11476:SF9 1 425 1.9E-220 T 26-04-2016 smi_0118 f93f2a07672e956f0e73312ef197e61e 429 PIRSF PIRSF001549 1 421 7.5E-121 T 26-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 smi_0118 f93f2a07672e956f0e73312ef197e61e 429 Pfam PF13393 Histidyl-tRNA synthetase 8 312 1.3E-43 T 26-04-2016 smi_0118 f93f2a07672e956f0e73312ef197e61e 429 PANTHER PTHR11476 1 425 1.9E-220 T 26-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 smi_0118 f93f2a07672e956f0e73312ef197e61e 429 Pfam PF03129 Anticodon binding domain 330 418 6.4E-13 T 26-04-2016 IPR004154 Anticodon-binding smi_0133 1b6ba1721c0d15398114aec48e23ace5 423 Gene3D G3DSA:3.40.190.10 166 347 2.5E-50 T 26-04-2016 smi_0133 1b6ba1721c0d15398114aec48e23ace5 423 PRINTS PR00181 Maltose binding protein signature 251 270 2.5E-6 T 26-04-2016 IPR006060 Maltose binding protein GO:0005363|GO:0015768 smi_0133 1b6ba1721c0d15398114aec48e23ace5 423 PRINTS PR00181 Maltose binding protein signature 376 395 2.5E-6 T 26-04-2016 IPR006060 Maltose binding protein GO:0005363|GO:0015768 smi_0133 1b6ba1721c0d15398114aec48e23ace5 423 PRINTS PR00181 Maltose binding protein signature 141 160 2.5E-6 T 26-04-2016 IPR006060 Maltose binding protein GO:0005363|GO:0015768 smi_0133 1b6ba1721c0d15398114aec48e23ace5 423 ProSitePatterns PS01037 Bacterial extracellular solute-binding proteins, family 1 signature. 144 161 - T 26-04-2016 IPR006061 Solute-binding family 1, conserved site GO:0005215|GO:0006810 smi_0133 1b6ba1721c0d15398114aec48e23ace5 423 Gene3D G3DSA:3.40.190.10 43 165 2.8E-11 T 26-04-2016 smi_0133 1b6ba1721c0d15398114aec48e23ace5 423 PANTHER PTHR30061:SF21 1 421 3.1E-128 T 26-04-2016 smi_0133 1b6ba1721c0d15398114aec48e23ace5 423 PANTHER PTHR30061 1 421 3.1E-128 T 26-04-2016 smi_0133 1b6ba1721c0d15398114aec48e23ace5 423 SUPERFAMILY SSF53850 43 413 6.85E-78 T 26-04-2016 smi_0133 1b6ba1721c0d15398114aec48e23ace5 423 Pfam PF13416 Bacterial extracellular solute-binding protein 58 359 6.8E-43 T 26-04-2016 smi_0965 2959a690dd583638379a5a436005c6e2 312 SUPERFAMILY SSF51395 3 304 3.03E-82 T 26-04-2016 smi_0965 2959a690dd583638379a5a436005c6e2 312 TIGRFAM TIGR01037 pyrD_sub1_fam: dihydroorotate dehydrogenase family protein 6 302 1.3E-108 T 26-04-2016 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 smi_0965 2959a690dd583638379a5a436005c6e2 312 PANTHER PTHR11938 1 304 1.1E-74 T 26-04-2016 smi_0965 2959a690dd583638379a5a436005c6e2 312 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 42 61 - T 26-04-2016 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 smi_0965 2959a690dd583638379a5a436005c6e2 312 PANTHER PTHR11938:SF5 1 304 1.1E-74 T 26-04-2016 smi_0965 2959a690dd583638379a5a436005c6e2 312 Pfam PF01180 Dihydroorotate dehydrogenase 6 292 1.7E-84 T 26-04-2016 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 smi_0965 2959a690dd583638379a5a436005c6e2 312 PIRSF PIRSF000164 1 305 2.7E-79 T 26-04-2016 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 Reactome: REACT_1698 smi_0965 2959a690dd583638379a5a436005c6e2 312 Hamap MF_00224 Dihydroorotate dehydrogenase [pyrD]. 6 307 38.747 T 26-04-2016 IPR024920 Dihydroorotate dehydrogenase, class 1 GO:0004152|GO:0005737|GO:0006221 smi_0965 2959a690dd583638379a5a436005c6e2 312 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 245 265 - T 26-04-2016 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 smi_0965 2959a690dd583638379a5a436005c6e2 312 Gene3D G3DSA:3.20.20.70 3 304 1.7E-90 T 26-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 smi_0222 f40c3a7b988a6e2c69ef9d2b14034518 221 SMART SM00934 7 212 4.6E-29 T 26-04-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 smi_0222 f40c3a7b988a6e2c69ef9d2b14034518 221 Gene3D G3DSA:3.20.20.70 5 220 8.7E-75 T 26-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 smi_0222 f40c3a7b988a6e2c69ef9d2b14034518 221 PANTHER PTHR35039:SF2 1 221 2.1E-109 T 26-04-2016 smi_0222 f40c3a7b988a6e2c69ef9d2b14034518 221 PANTHER PTHR35039 1 221 2.1E-109 T 26-04-2016 smi_0222 f40c3a7b988a6e2c69ef9d2b14034518 221 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 6 211 3.1E-29 T 26-04-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 smi_0222 f40c3a7b988a6e2c69ef9d2b14034518 221 SUPERFAMILY SSF51366 5 216 7.07E-36 T 26-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 smi_0180 36e5bc1f1e4e7319ff6f8a27240d0630 377 PANTHER PTHR30349 93 377 3.5E-52 T 26-04-2016 smi_0180 36e5bc1f1e4e7319ff6f8a27240d0630 377 SUPERFAMILY SSF56349 67 371 9.12E-55 T 26-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 smi_0180 36e5bc1f1e4e7319ff6f8a27240d0630 377 Pfam PF00589 Phage integrase family 180 362 6.1E-26 T 26-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 smi_0180 36e5bc1f1e4e7319ff6f8a27240d0630 377 Pfam PF14657 AP2-like DNA-binding integrase domain 11 45 4.8E-6 T 26-04-2016 IPR028259 AP2-like integrase, N-terminal domain smi_0180 36e5bc1f1e4e7319ff6f8a27240d0630 377 Gene3D G3DSA:1.10.150.130 78 169 9.9E-6 T 26-04-2016 IPR023109 Integrase/recombinase, N-terminal smi_0180 36e5bc1f1e4e7319ff6f8a27240d0630 377 PANTHER PTHR30349:SF20 93 377 3.5E-52 T 26-04-2016 smi_0180 36e5bc1f1e4e7319ff6f8a27240d0630 377 Gene3D G3DSA:1.10.443.10 173 376 1.2E-39 T 26-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 smi_2013 b099c272389cb76341bdf3cfcf560e77 208 Pfam PF09669 Phage regulatory protein Rha (Phage_pRha) 16 98 1.5E-14 T 26-04-2016 IPR014054 Bacteriophage regulatory protein, Rha family smi_0567 ecee9d093f7f1da57a9c790887540030 254 PANTHER PTHR24322 7 134 2.5E-61 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR smi_0567 ecee9d093f7f1da57a9c790887540030 254 PANTHER PTHR24322 150 182 2.5E-61 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR smi_0567 ecee9d093f7f1da57a9c790887540030 254 TIGRFAM TIGR02415 23BDH: acetoin reductases 3 253 1.3E-103 T 26-04-2016 IPR014007 Acetoin reductase GO:0019152|GO:0045150|GO:0055114 KEGG: 00072+1.1.1.30|KEGG: 00650+1.1.1.304+1.1.1.30|MetaCyc: PWY-6389 smi_0567 ecee9d093f7f1da57a9c790887540030 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 76 87 8.8E-10 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR smi_0567 ecee9d093f7f1da57a9c790887540030 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 130 138 8.8E-10 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR smi_0567 ecee9d093f7f1da57a9c790887540030 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 150 169 8.8E-10 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR smi_0567 ecee9d093f7f1da57a9c790887540030 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 215 235 2.8E-39 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR smi_0567 ecee9d093f7f1da57a9c790887540030 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 188 2.8E-39 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR smi_0567 ecee9d093f7f1da57a9c790887540030 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 76 87 2.8E-39 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR smi_0567 ecee9d093f7f1da57a9c790887540030 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 2.8E-39 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR smi_0567 ecee9d093f7f1da57a9c790887540030 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 150 169 2.8E-39 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR smi_0567 ecee9d093f7f1da57a9c790887540030 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 124 140 2.8E-39 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR smi_0567 ecee9d093f7f1da57a9c790887540030 254 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 9 251 1.8E-60 T 26-04-2016 smi_0567 ecee9d093f7f1da57a9c790887540030 254 SUPERFAMILY SSF51735 3 252 2.16E-80 T 26-04-2016 IPR016040 NAD(P)-binding domain smi_0567 ecee9d093f7f1da57a9c790887540030 254 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 137 165 - T 26-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 smi_0567 ecee9d093f7f1da57a9c790887540030 254 PANTHER PTHR24322:SF347 7 134 2.5E-61 T 26-04-2016 smi_0567 ecee9d093f7f1da57a9c790887540030 254 PANTHER PTHR24322:SF347 150 182 2.5E-61 T 26-04-2016 smi_0567 ecee9d093f7f1da57a9c790887540030 254 Gene3D G3DSA:3.40.50.720 2 252 2.8E-82 T 26-04-2016 IPR016040 NAD(P)-binding domain smi_1587 49ec401ccd7238116bf11e91daf283f0 788 Pfam PF01368 DHH family 132 276 3.1E-13 T 26-04-2016 IPR001667 DDH domain smi_1587 49ec401ccd7238116bf11e91daf283f0 788 PANTHER PTHR30255:SF2 50 782 0.0 T 26-04-2016 smi_1587 49ec401ccd7238116bf11e91daf283f0 788 SUPERFAMILY SSF64182 106 485 5.49E-119 T 26-04-2016 smi_1587 49ec401ccd7238116bf11e91daf283f0 788 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 79 604 7.3E-182 T 26-04-2016 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 smi_1587 49ec401ccd7238116bf11e91daf283f0 788 Pfam PF02272 DHHA1 domain 419 480 1.4E-10 T 26-04-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7 smi_1587 49ec401ccd7238116bf11e91daf283f0 788 PANTHER PTHR30255 50 782 0.0 T 26-04-2016 smi_1587 49ec401ccd7238116bf11e91daf283f0 788 Pfam PF10141 Single-strand DNA-specific exonuclease, C terminal domain 641 781 4.2E-35 T 26-04-2016 IPR018779 Single-stranded-DNA-specific exonuclease RecJ, C-terminal smi_0105 0d656104ead98dd30234ab27025252eb 49 PANTHER PTHR15238 1 49 1.1E-16 T 26-04-2016 smi_0105 0d656104ead98dd30234ab27025252eb 49 Pfam PF00471 Ribosomal protein L33 3 49 3.2E-18 T 26-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_0105 0d656104ead98dd30234ab27025252eb 49 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 1 49 15.678 T 26-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_0105 0d656104ead98dd30234ab27025252eb 49 ProSitePatterns PS00582 Ribosomal protein L33 signature. 17 36 - T 26-04-2016 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_0105 0d656104ead98dd30234ab27025252eb 49 SUPERFAMILY SSF57829 1 49 2.44E-15 T 26-04-2016 IPR011332 Zinc-binding ribosomal protein GO:0006412 smi_0105 0d656104ead98dd30234ab27025252eb 49 PANTHER PTHR15238:SF3 1 49 1.1E-16 T 26-04-2016 smi_0105 0d656104ead98dd30234ab27025252eb 49 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 3 49 3.3E-17 T 26-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_0630 5fd6c7f6e0f271141e80a6319c43f47e 803 SUPERFAMILY SSF48208 284 768 2.04E-77 T 26-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 smi_0630 5fd6c7f6e0f271141e80a6319c43f47e 803 PANTHER PTHR31084 11 801 0.0 T 26-04-2016 smi_0630 5fd6c7f6e0f271141e80a6319c43f47e 803 Pfam PF14498 Glycosyl hydrolase family 65, N-terminal domain 11 273 7.1E-55 T 26-04-2016 IPR027414 Glycosyl hydrolase family, N-terminal domain KEGG: 00511+3.2.1.51 smi_0630 5fd6c7f6e0f271141e80a6319c43f47e 803 PANTHER PTHR31084:SF0 11 801 0.0 T 26-04-2016 smi_0630 5fd6c7f6e0f271141e80a6319c43f47e 803 Gene3D G3DSA:2.70.98.50 11 411 1.2E-126 T 26-04-2016 IPR027414 Glycosyl hydrolase family, N-terminal domain KEGG: 00511+3.2.1.51 smi_0630 5fd6c7f6e0f271141e80a6319c43f47e 803 PIRSF PIRSF007663 3 800 2.9E-273 T 26-04-2016 IPR016518 Alpha-L-fucosidase GO:0004560 KEGG: 00511+3.2.1.51 smi_1613 dc6205a5187ebe45f34a85ebe570cff5 205 PANTHER PTHR12677:SF26 17 197 1.7E-12 T 26-04-2016 smi_1613 dc6205a5187ebe45f34a85ebe570cff5 205 PANTHER PTHR12677 17 197 1.7E-12 T 26-04-2016 IPR015414 Transmembrane protein TMEM64/TMEM41 GO:0016021 smi_1613 dc6205a5187ebe45f34a85ebe570cff5 205 Pfam PF09335 SNARE associated Golgi protein 76 192 1.3E-16 T 26-04-2016 IPR032816 SNARE associated Golgi protein smi_1837 a5e75226c1aed2892288b49f9894a445 238 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 1 235 2.2E-66 T 26-04-2016 IPR002876 Transcriptional regulator TACO1-like smi_1837 a5e75226c1aed2892288b49f9894a445 238 Pfam PF01709 Transcriptional regulator 4 235 4.5E-79 T 26-04-2016 IPR002876 Transcriptional regulator TACO1-like smi_1837 a5e75226c1aed2892288b49f9894a445 238 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 1 237 30.423 T 26-04-2016 IPR002876 Transcriptional regulator TACO1-like smi_1837 a5e75226c1aed2892288b49f9894a445 238 Gene3D G3DSA:1.10.10.200 1 77 4.4E-28 T 26-04-2016 IPR017856 Integrase, N-terminal zinc-binding domain-like smi_1837 a5e75226c1aed2892288b49f9894a445 238 PANTHER PTHR12532 1 236 1.2E-149 T 26-04-2016 IPR002876 Transcriptional regulator TACO1-like smi_1837 a5e75226c1aed2892288b49f9894a445 238 Gene3D G3DSA:3.30.1270.10 80 131 5.1E-33 T 26-04-2016 IPR026563 Transcriptional regulator TACO1-like, domain 2 smi_1837 a5e75226c1aed2892288b49f9894a445 238 Gene3D G3DSA:3.30.1270.10 210 236 5.1E-33 T 26-04-2016 IPR026563 Transcriptional regulator TACO1-like, domain 2 smi_1837 a5e75226c1aed2892288b49f9894a445 238 Hamap MF_00918 Probable transcriptional regulatory protein YeeN [yeeN]. 1 238 60.576 T 26-04-2016 IPR026562 Probable transcriptional regulatory protein YeeN smi_1837 a5e75226c1aed2892288b49f9894a445 238 PANTHER PTHR12532:SF4 1 236 1.2E-149 T 26-04-2016 smi_1837 a5e75226c1aed2892288b49f9894a445 238 SUPERFAMILY SSF75625 1 236 7.72E-80 T 26-04-2016 IPR029072 YebC-like smi_1837 a5e75226c1aed2892288b49f9894a445 238 Gene3D G3DSA:3.30.70.980 132 202 1.6E-23 T 26-04-2016 IPR026564 Transcriptional regulator TACO1-like, domain 3 smi_0749 edc3c151d59797cd7258844b182d80fc 872 Pfam PF02272 DHHA1 domain 805 868 3.4E-13 T 26-04-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7 smi_0749 edc3c151d59797cd7258844b182d80fc 872 SUPERFAMILY SSF55681 5 248 7.7E-79 T 26-04-2016 smi_0749 edc3c151d59797cd7258844b182d80fc 872 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 872 169.476 T 26-04-2016 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 smi_0749 edc3c151d59797cd7258844b182d80fc 872 PRINTS PR00980 Alanyl-tRNA synthetase signature 229 242 5.1E-29 T 26-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 smi_0749 edc3c151d59797cd7258844b182d80fc 872 PRINTS PR00980 Alanyl-tRNA synthetase signature 302 315 5.1E-29 T 26-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 smi_0749 edc3c151d59797cd7258844b182d80fc 872 PRINTS PR00980 Alanyl-tRNA synthetase signature 73 84 5.1E-29 T 26-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 smi_0749 edc3c151d59797cd7258844b182d80fc 872 PRINTS PR00980 Alanyl-tRNA synthetase signature 278 294 5.1E-29 T 26-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 smi_0749 edc3c151d59797cd7258844b182d80fc 872 PRINTS PR00980 Alanyl-tRNA synthetase signature 199 210 5.1E-29 T 26-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 smi_0749 edc3c151d59797cd7258844b182d80fc 872 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 656 698 4.6E-20 T 26-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 smi_0749 edc3c151d59797cd7258844b182d80fc 872 PANTHER PTHR11777:SF9 1 868 0.0 T 26-04-2016 smi_0749 edc3c151d59797cd7258844b182d80fc 872 SMART SM00863 656 699 1.9E-21 T 26-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 smi_0749 edc3c151d59797cd7258844b182d80fc 872 SUPERFAMILY SSF50447 486 550 7.77E-12 T 26-04-2016 IPR009000 Translation protein, beta-barrel domain smi_0749 edc3c151d59797cd7258844b182d80fc 872 Gene3D G3DSA:3.30.930.10 4 244 5.3E-87 T 26-04-2016 smi_0749 edc3c151d59797cd7258844b182d80fc 872 SUPERFAMILY SSF55186 555 714 6.02E-54 T 26-04-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 smi_0749 edc3c151d59797cd7258844b182d80fc 872 SUPERFAMILY SSF101353 249 443 1.44E-65 T 26-04-2016 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7|Reactome: REACT_71 smi_0749 edc3c151d59797cd7258844b182d80fc 872 PANTHER PTHR11777 1 868 0.0 T 26-04-2016 smi_0749 edc3c151d59797cd7258844b182d80fc 872 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 8 855 1.5E-290 T 26-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 smi_0749 edc3c151d59797cd7258844b182d80fc 872 Pfam PF01411 tRNA synthetases class II (A) 8 558 3.0E-182 T 26-04-2016 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 smi_1127 2bf258c32b7d8a9efdb627e724f58d1b 359 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 3 358 39.123 T 26-04-2016 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 smi_1127 2bf258c32b7d8a9efdb627e724f58d1b 359 Pfam PF03462 PCRF domain 11 205 1.0E-69 T 26-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 smi_1127 2bf258c32b7d8a9efdb627e724f58d1b 359 Pfam PF00472 RF-1 domain 213 322 5.9E-38 T 26-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 smi_1127 2bf258c32b7d8a9efdb627e724f58d1b 359 PANTHER PTHR11075:SF9 2 357 9.8E-168 T 26-04-2016 smi_1127 2bf258c32b7d8a9efdb627e724f58d1b 359 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 3 358 8.4E-159 T 26-04-2016 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 smi_1127 2bf258c32b7d8a9efdb627e724f58d1b 359 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 229 245 - T 26-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 smi_1127 2bf258c32b7d8a9efdb627e724f58d1b 359 SUPERFAMILY SSF75620 10 354 2.09E-126 T 26-04-2016 smi_1127 2bf258c32b7d8a9efdb627e724f58d1b 359 SMART SM00937 65 180 5.7E-59 T 26-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 smi_1127 2bf258c32b7d8a9efdb627e724f58d1b 359 Gene3D G3DSA:3.30.160.20 212 285 2.4E-29 T 26-04-2016 IPR014720 Double-stranded RNA-binding domain smi_1127 2bf258c32b7d8a9efdb627e724f58d1b 359 Gene3D G3DSA:1.20.58.410 4 95 2.6E-21 T 26-04-2016 smi_1127 2bf258c32b7d8a9efdb627e724f58d1b 359 PANTHER PTHR11075 2 357 9.8E-168 T 26-04-2016 smi_1855 484c2c00b06c3b8b4d886b6904695947 252 Pfam PF01255 Putative undecaprenyl diphosphate synthase 26 250 4.1E-81 T 26-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 smi_1855 484c2c00b06c3b8b4d886b6904695947 252 Gene3D G3DSA:3.40.1180.10 16 251 3.4E-95 T 26-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 smi_1855 484c2c00b06c3b8b4d886b6904695947 252 SUPERFAMILY SSF64005 17 245 1.31E-86 T 26-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 smi_1855 484c2c00b06c3b8b4d886b6904695947 252 PANTHER PTHR10291 19 252 1.0E-120 T 26-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 smi_1855 484c2c00b06c3b8b4d886b6904695947 252 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 19 251 39.937 T 26-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 smi_1855 484c2c00b06c3b8b4d886b6904695947 252 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 19 250 1.4E-84 T 26-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 smi_1855 484c2c00b06c3b8b4d886b6904695947 252 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 196 213 - T 26-04-2016 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 smi_1457 4091af77b54c8bd6e419381657a7b649 198 PANTHER PTHR26402 1 194 6.5E-37 T 26-04-2016 smi_1457 4091af77b54c8bd6e419381657a7b649 198 SMART SM00448 1 116 4.0E-16 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 smi_1457 4091af77b54c8bd6e419381657a7b649 198 PANTHER PTHR26402:SF151 1 194 6.5E-37 T 26-04-2016 smi_1457 4091af77b54c8bd6e419381657a7b649 198 Pfam PF00072 Response regulator receiver domain 3 116 2.6E-19 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 smi_1457 4091af77b54c8bd6e419381657a7b649 198 Gene3D G3DSA:1.10.10.10 139 194 1.6E-21 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain smi_1457 4091af77b54c8bd6e419381657a7b649 198 SUPERFAMILY SSF46894 131 196 2.21E-18 T 26-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 smi_1457 4091af77b54c8bd6e419381657a7b649 198 SMART SM00421 132 189 3.3E-18 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 smi_1457 4091af77b54c8bd6e419381657a7b649 198 Pfam PF00196 Bacterial regulatory proteins, luxR family 134 189 9.2E-17 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 smi_1457 4091af77b54c8bd6e419381657a7b649 198 SUPERFAMILY SSF52172 1 128 6.12E-19 T 26-04-2016 IPR011006 CheY-like superfamily smi_1457 4091af77b54c8bd6e419381657a7b649 198 Gene3D G3DSA:3.40.50.2300 1 138 4.1E-24 T 26-04-2016 smi_1457 4091af77b54c8bd6e419381657a7b649 198 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 135 149 5.7E-11 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 smi_1457 4091af77b54c8bd6e419381657a7b649 198 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 165 177 5.7E-11 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 smi_1457 4091af77b54c8bd6e419381657a7b649 198 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 165 5.7E-11 T 26-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 smi_0836 3bb1386be27fdbd0a7e419f2da337eec 207 Gene3D G3DSA:3.40.50.300 3 202 1.3E-57 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0836 3bb1386be27fdbd0a7e419f2da337eec 207 SUPERFAMILY SSF52540 3 202 1.41E-54 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0836 3bb1386be27fdbd0a7e419f2da337eec 207 PANTHER PTHR24220 4 202 1.2E-62 T 26-04-2016 smi_0836 3bb1386be27fdbd0a7e419f2da337eec 207 ProSitePatterns PS00211 ABC transporters family signature. 129 143 - T 26-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 smi_0836 3bb1386be27fdbd0a7e419f2da337eec 207 Pfam PF00005 ABC transporter 19 156 9.1E-35 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 smi_0836 3bb1386be27fdbd0a7e419f2da337eec 207 SMART SM00382 27 204 2.2E-15 T 26-04-2016 IPR003593 AAA+ ATPase domain smi_1677 3502fcda356c4510e625cf6ac0ea6cbd 140 SUPERFAMILY SSF54637 5 138 1.42E-46 T 26-04-2016 IPR029069 HotDog domain smi_1677 3502fcda356c4510e625cf6ac0ea6cbd 140 PANTHER PTHR30272 1 140 3.8E-77 T 26-04-2016 smi_1677 3502fcda356c4510e625cf6ac0ea6cbd 140 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 2 138 1.4E-60 T 26-04-2016 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 smi_1677 3502fcda356c4510e625cf6ac0ea6cbd 140 Gene3D G3DSA:3.10.129.10 1 138 6.6E-55 T 26-04-2016 IPR029069 HotDog domain smi_1677 3502fcda356c4510e625cf6ac0ea6cbd 140 Pfam PF07977 FabA-like domain 11 131 1.1E-34 T 26-04-2016 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 smi_1677 3502fcda356c4510e625cf6ac0ea6cbd 140 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 2 140 33.813 T 26-04-2016 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 smi_1604 e2b44e07f0f2730e6993e982f834b289 1014 TIGRFAM TIGR00348 hsdR: type I site-specific deoxyribonuclease, HsdR family 69 737 1.1E-177 T 26-04-2016 IPR004473 Restriction endonuclease, type I, HsdR GO:0003677|GO:0005524|GO:0009035|GO:0009307 smi_1604 e2b44e07f0f2730e6993e982f834b289 1014 Pfam PF04851 Type III restriction enzyme, res subunit 276 443 1.4E-35 T 26-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 smi_1604 e2b44e07f0f2730e6993e982f834b289 1014 PANTHER PTHR30195 533 916 8.7E-134 T 26-04-2016 smi_1604 e2b44e07f0f2730e6993e982f834b289 1014 PANTHER PTHR30195 20 514 8.7E-134 T 26-04-2016 smi_1604 e2b44e07f0f2730e6993e982f834b289 1014 PANTHER PTHR30195:SF16 533 916 8.7E-134 T 26-04-2016 smi_1604 e2b44e07f0f2730e6993e982f834b289 1014 PANTHER PTHR30195:SF16 20 514 8.7E-134 T 26-04-2016 smi_1604 e2b44e07f0f2730e6993e982f834b289 1014 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 34 223 1.5E-47 T 26-04-2016 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 smi_1604 e2b44e07f0f2730e6993e982f834b289 1014 Pfam PF12008 Type I restriction and modification enzyme - subunit R C terminal 742 1010 7.1E-52 T 26-04-2016 IPR022625 Type-1 restriction enzyme R protein, C-terminal smi_1604 e2b44e07f0f2730e6993e982f834b289 1014 Gene3D G3DSA:3.40.50.300 276 461 8.0E-23 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1604 e2b44e07f0f2730e6993e982f834b289 1014 SUPERFAMILY SSF52540 234 446 1.98E-29 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1604 e2b44e07f0f2730e6993e982f834b289 1014 SMART SM00487 272 482 1.2E-14 T 26-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain smi_1840 207b949faaecdd307483fd42fb281606 418 Pfam PF02464 Competence-damaged protein 262 415 6.1E-50 T 26-04-2016 IPR008136 CinA, C-terminal smi_1840 207b949faaecdd307483fd42fb281606 418 SUPERFAMILY SSF53218 1 203 1.7E-39 T 26-04-2016 IPR001453 MoaB/Mog domain smi_1840 207b949faaecdd307483fd42fb281606 418 PIRSF PIRSF006728 1 418 8.8E-143 T 26-04-2016 IPR008135 Competence-induced protein CinA smi_1840 207b949faaecdd307483fd42fb281606 418 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 268 414 1.7E-35 T 26-04-2016 IPR008136 CinA, C-terminal smi_1840 207b949faaecdd307483fd42fb281606 418 PANTHER PTHR13939:SF0 1 418 1.7E-181 T 26-04-2016 smi_1840 207b949faaecdd307483fd42fb281606 418 TIGRFAM TIGR00200 cinA_nterm: competence/damage-inducible protein CinA N-terminal domain 1 415 1.6E-115 T 26-04-2016 IPR008135 Competence-induced protein CinA smi_1840 207b949faaecdd307483fd42fb281606 418 Gene3D G3DSA:3.90.950.20 258 416 9.8E-54 T 26-04-2016 IPR008136 CinA, C-terminal smi_1840 207b949faaecdd307483fd42fb281606 418 SUPERFAMILY SSF142433 258 415 1.57E-45 T 26-04-2016 IPR008136 CinA, C-terminal smi_1840 207b949faaecdd307483fd42fb281606 418 Gene3D G3DSA:3.40.980.10 144 169 7.2E-34 T 26-04-2016 IPR001453 MoaB/Mog domain smi_1840 207b949faaecdd307483fd42fb281606 418 Gene3D G3DSA:3.40.980.10 1 102 7.2E-34 T 26-04-2016 IPR001453 MoaB/Mog domain smi_1840 207b949faaecdd307483fd42fb281606 418 PANTHER PTHR13939 1 418 1.7E-181 T 26-04-2016 smi_1840 207b949faaecdd307483fd42fb281606 418 Pfam PF00994 Probable molybdopterin binding domain 4 169 3.2E-32 T 26-04-2016 IPR001453 MoaB/Mog domain smi_1840 207b949faaecdd307483fd42fb281606 418 Hamap MF_00226_B Putative competence-damage inducible protein [cinA]. 1 418 161.417 T 26-04-2016 IPR008135 Competence-induced protein CinA smi_1840 207b949faaecdd307483fd42fb281606 418 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 1 163 5.3E-25 T 26-04-2016 IPR001453 MoaB/Mog domain smi_1840 207b949faaecdd307483fd42fb281606 418 SMART SM00852 4 172 2.1E-35 T 26-04-2016 IPR001453 MoaB/Mog domain smi_1206 9d077d112a4604dec6be730303eb992f 429 SMART SM00962 225 426 5.3E-110 T 26-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 smi_1206 9d077d112a4604dec6be730303eb992f 429 SUPERFAMILY SSF47364 125 202 1.31E-17 T 26-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 smi_1206 9d077d112a4604dec6be730303eb992f 429 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 399 412 - T 26-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 smi_1206 9d077d112a4604dec6be730303eb992f 429 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 152 426 62.134 T 26-04-2016 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 smi_1206 9d077d112a4604dec6be730303eb992f 429 PANTHER PTHR11564 118 426 1.5E-129 T 26-04-2016 smi_1206 9d077d112a4604dec6be730303eb992f 429 Pfam PF02881 SRP54-type protein, helical bundle domain 139 205 1.8E-12 T 26-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 smi_1206 9d077d112a4604dec6be730303eb992f 429 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 153 425 3.9E-106 T 26-04-2016 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 smi_1206 9d077d112a4604dec6be730303eb992f 429 Pfam PF00448 SRP54-type protein, GTPase domain 226 425 5.1E-75 T 26-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 smi_1206 9d077d112a4604dec6be730303eb992f 429 SMART SM00963 128 209 8.2E-21 T 26-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 smi_1206 9d077d112a4604dec6be730303eb992f 429 Gene3D G3DSA:1.20.120.140 153 238 4.4E-25 T 26-04-2016 smi_1206 9d077d112a4604dec6be730303eb992f 429 PANTHER PTHR11564:SF16 118 426 1.5E-129 T 26-04-2016 smi_1206 9d077d112a4604dec6be730303eb992f 429 Gene3D G3DSA:3.40.50.300 239 426 1.4E-75 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1206 9d077d112a4604dec6be730303eb992f 429 SMART SM00382 224 404 5.7E-7 T 26-04-2016 IPR003593 AAA+ ATPase domain smi_1206 9d077d112a4604dec6be730303eb992f 429 SUPERFAMILY SSF52540 226 425 1.13E-48 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_2026 6b51c6dc38d3c840d7e61ec3b300ada5 234 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 26-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 smi_2026 6b51c6dc38d3c840d7e61ec3b300ada5 234 SMART SM00382 28 216 9.6E-13 T 26-04-2016 IPR003593 AAA+ ATPase domain smi_2026 6b51c6dc38d3c840d7e61ec3b300ada5 234 Pfam PF00005 ABC transporter 19 165 6.3E-24 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 smi_2026 6b51c6dc38d3c840d7e61ec3b300ada5 234 Gene3D G3DSA:3.40.50.300 4 212 7.4E-54 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_2026 6b51c6dc38d3c840d7e61ec3b300ada5 234 PANTHER PTHR24220 5 207 2.6E-61 T 26-04-2016 smi_2026 6b51c6dc38d3c840d7e61ec3b300ada5 234 SUPERFAMILY SSF52540 3 214 1.75E-49 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1396 82abfab6909c61d23b3136ea9df52c76 305 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 6 291 2.4E-154 T 26-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 smi_1396 82abfab6909c61d23b3136ea9df52c76 305 Gene3D G3DSA:3.30.930.10 2 207 1.9E-100 T 26-04-2016 smi_1396 82abfab6909c61d23b3136ea9df52c76 305 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 7 283 3.6E-145 T 26-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 smi_1396 82abfab6909c61d23b3136ea9df52c76 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 59 74 2.71E-64 T 26-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 smi_1396 82abfab6909c61d23b3136ea9df52c76 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 160 175 2.71E-64 T 26-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 smi_1396 82abfab6909c61d23b3136ea9df52c76 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 137 157 2.71E-64 T 26-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 smi_1396 82abfab6909c61d23b3136ea9df52c76 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 80 100 2.71E-64 T 26-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 smi_1396 82abfab6909c61d23b3136ea9df52c76 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 111 135 2.71E-64 T 26-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 smi_1396 82abfab6909c61d23b3136ea9df52c76 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 245 261 2.71E-64 T 26-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 smi_1396 82abfab6909c61d23b3136ea9df52c76 305 PANTHER PTHR30075 1 305 5.0E-248 T 26-04-2016 smi_1396 82abfab6909c61d23b3136ea9df52c76 305 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 5 285 57.678 T 26-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 smi_1396 82abfab6909c61d23b3136ea9df52c76 305 Gene3D G3DSA:1.20.58.180 209 290 7.3E-38 T 26-04-2016 smi_1396 82abfab6909c61d23b3136ea9df52c76 305 SUPERFAMILY SSF55681 6 284 4.97E-129 T 26-04-2016 smi_0151 af68aee2862bf92929410a26cf32f0a6 148 PRINTS PR01467 Bacterial arginine repressor signature 114 129 1.3E-12 T 26-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 smi_0151 af68aee2862bf92929410a26cf32f0a6 148 PRINTS PR01467 Bacterial arginine repressor signature 37 52 1.3E-12 T 26-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 smi_0151 af68aee2862bf92929410a26cf32f0a6 148 PRINTS PR01467 Bacterial arginine repressor signature 21 34 1.3E-12 T 26-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 smi_0151 af68aee2862bf92929410a26cf32f0a6 148 TIGRFAM TIGR01529 argR_whole: arginine repressor 5 145 6.9E-53 T 26-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 smi_0151 af68aee2862bf92929410a26cf32f0a6 148 Gene3D G3DSA:3.30.1360.40 75 146 2.3E-20 T 26-04-2016 IPR024946 Arginine repressor C-terminal-like domain smi_0151 af68aee2862bf92929410a26cf32f0a6 148 SUPERFAMILY SSF46785 3 71 8.16E-17 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain smi_0151 af68aee2862bf92929410a26cf32f0a6 148 Pfam PF02863 Arginine repressor, C-terminal domain 80 141 6.2E-15 T 26-04-2016 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 UniPathway: UPA00068 smi_0151 af68aee2862bf92929410a26cf32f0a6 148 SUPERFAMILY SSF55252 76 144 6.93E-16 T 26-04-2016 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 UniPathway: UPA00068 smi_0151 af68aee2862bf92929410a26cf32f0a6 148 Pfam PF01316 Arginine repressor, DNA binding domain 1 68 8.4E-27 T 26-04-2016 IPR020900 Arginine repressor, DNA-binding domain GO:0003700|GO:0006355|GO:0006525 UniPathway: UPA00068 smi_0151 af68aee2862bf92929410a26cf32f0a6 148 PANTHER PTHR34471 1 148 5.8E-57 T 26-04-2016 smi_0151 af68aee2862bf92929410a26cf32f0a6 148 Hamap MF_00173 Arginine repressor [argR]. 1 148 45.616 T 26-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 smi_0151 af68aee2862bf92929410a26cf32f0a6 148 Gene3D G3DSA:1.10.10.10 9 65 3.1E-19 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain smi_0151 af68aee2862bf92929410a26cf32f0a6 148 PANTHER PTHR34471:SF1 1 148 5.8E-57 T 26-04-2016 smi_0151 af68aee2862bf92929410a26cf32f0a6 148 ProDom PD007402 ARGININE REPRESSOR TRANSCRIPTION BIOSYNTHESIS DNA-BINDING REGULATION AMINO-ACID ARGR TRANSCRIPTIONAL FAMILY 83 145 3.0E-4 T 26-04-2016 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 UniPathway: UPA00068 smi_0996 942270479afec63eb446dbdde180a31d 58 PANTHER PTHR33885 1 58 2.5E-20 T 26-04-2016 smi_0996 942270479afec63eb446dbdde180a31d 58 Pfam PF04024 PspC domain 1 54 3.0E-20 T 26-04-2016 IPR007168 Phage shock protein, PspC, N-terminal smi_0217 cff3ad55a28c0aefed18d4cc8ce1a83f 329 SMART SM01245 3 55 2.8E-21 T 26-04-2016 IPR032782 Jag, N-terminal smi_0217 cff3ad55a28c0aefed18d4cc8ce1a83f 329 SMART SM00393 250 329 8.0E-10 T 26-04-2016 IPR001374 R3H domain GO:0003676 smi_0217 cff3ad55a28c0aefed18d4cc8ce1a83f 329 Pfam PF01424 R3H domain 269 326 5.4E-16 T 26-04-2016 IPR001374 R3H domain GO:0003676 smi_0217 cff3ad55a28c0aefed18d4cc8ce1a83f 329 Pfam PF13083 KH domain 188 257 3.0E-16 T 26-04-2016 smi_0217 cff3ad55a28c0aefed18d4cc8ce1a83f 329 Gene3D G3DSA:3.30.1370.50 261 327 3.4E-24 T 26-04-2016 IPR001374 R3H domain GO:0003676 smi_0217 cff3ad55a28c0aefed18d4cc8ce1a83f 329 Gene3D G3DSA:3.30.30.80 1 52 3.1E-18 T 26-04-2016 IPR032782 Jag, N-terminal smi_0217 cff3ad55a28c0aefed18d4cc8ce1a83f 329 SUPERFAMILY SSF82708 270 326 1.8E-9 T 26-04-2016 IPR001374 R3H domain GO:0003676 smi_0217 cff3ad55a28c0aefed18d4cc8ce1a83f 329 PANTHER PTHR35800 179 326 9.4E-65 T 26-04-2016 smi_0217 cff3ad55a28c0aefed18d4cc8ce1a83f 329 PANTHER PTHR35800 1 54 9.4E-65 T 26-04-2016 smi_0217 cff3ad55a28c0aefed18d4cc8ce1a83f 329 Pfam PF14804 Jag N-terminus 4 52 1.7E-18 T 26-04-2016 IPR032782 Jag, N-terminal smi_0217 cff3ad55a28c0aefed18d4cc8ce1a83f 329 Gene3D G3DSA:3.30.300.120 183 259 8.7E-19 T 26-04-2016 smi_0729 8c7438990f5d02ae4cfe3aef2b5ab0fe 92 PANTHER PTHR41305 4 92 4.2E-43 T 26-04-2016 smi_0729 8c7438990f5d02ae4cfe3aef2b5ab0fe 92 SUPERFAMILY SSF158504 6 89 9.55E-34 T 26-04-2016 IPR023324 BH2638-like domain smi_0729 8c7438990f5d02ae4cfe3aef2b5ab0fe 92 Hamap MF_01041 UPF0223 protein . 3 90 26.633 T 26-04-2016 IPR007920 Protein of unknown function UPF0223 smi_0729 8c7438990f5d02ae4cfe3aef2b5ab0fe 92 PIRSF PIRSF037260 1 92 1.0E-40 T 26-04-2016 IPR007920 Protein of unknown function UPF0223 smi_0729 8c7438990f5d02ae4cfe3aef2b5ab0fe 92 Gene3D G3DSA:1.10.220.80 14 91 3.5E-35 T 26-04-2016 IPR023324 BH2638-like domain smi_0729 8c7438990f5d02ae4cfe3aef2b5ab0fe 92 ProDom PD062738 UPF0223 FAMILY UNCHARACTERISED CYTOSOLIC SUPERFAMILY YKTA LMO1058/LIN1050 INOSITOL MW0980 M6_SPY0948 5 90 1.0E-41 T 26-04-2016 IPR007920 Protein of unknown function UPF0223 smi_0729 8c7438990f5d02ae4cfe3aef2b5ab0fe 92 Pfam PF05256 Uncharacterised protein family (UPF0223) 4 88 7.0E-37 T 26-04-2016 IPR007920 Protein of unknown function UPF0223 smi_1471 a1b278ff22088e7bc67caf67fbecc0bb 251 PANTHER PTHR24322 6 128 1.7E-77 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR smi_1471 a1b278ff22088e7bc67caf67fbecc0bb 251 PANTHER PTHR24322 144 176 1.7E-77 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR smi_1471 a1b278ff22088e7bc67caf67fbecc0bb 251 SUPERFAMILY SSF51735 3 240 6.72E-56 T 26-04-2016 IPR016040 NAD(P)-binding domain smi_1471 a1b278ff22088e7bc67caf67fbecc0bb 251 PANTHER PTHR24322:SF509 6 128 1.7E-77 T 26-04-2016 smi_1471 a1b278ff22088e7bc67caf67fbecc0bb 251 PANTHER PTHR24322:SF509 144 176 1.7E-77 T 26-04-2016 smi_1471 a1b278ff22088e7bc67caf67fbecc0bb 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 7.1E-25 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR smi_1471 a1b278ff22088e7bc67caf67fbecc0bb 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 144 163 7.1E-25 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR smi_1471 a1b278ff22088e7bc67caf67fbecc0bb 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 165 182 7.1E-25 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR smi_1471 a1b278ff22088e7bc67caf67fbecc0bb 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 71 82 7.1E-25 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR smi_1471 a1b278ff22088e7bc67caf67fbecc0bb 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 118 134 7.1E-25 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR smi_1471 a1b278ff22088e7bc67caf67fbecc0bb 251 Gene3D G3DSA:3.40.50.720 3 218 4.2E-55 T 26-04-2016 IPR016040 NAD(P)-binding domain smi_1471 a1b278ff22088e7bc67caf67fbecc0bb 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 144 163 8.9E-12 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR smi_1471 a1b278ff22088e7bc67caf67fbecc0bb 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 71 82 8.9E-12 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR smi_1471 a1b278ff22088e7bc67caf67fbecc0bb 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 124 132 8.9E-12 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR smi_1471 a1b278ff22088e7bc67caf67fbecc0bb 251 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 131 159 - T 26-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 smi_1471 a1b278ff22088e7bc67caf67fbecc0bb 251 Pfam PF00106 short chain dehydrogenase 3 185 2.0E-47 T 26-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR smi_1747 421421ff28d922e6e55cadf4e36504a1 292 Gene3D G3DSA:3.30.70.890 167 288 8.8E-37 T 26-04-2016 IPR013750 GHMP kinase, C-terminal domain smi_1747 421421ff28d922e6e55cadf4e36504a1 292 TIGRFAM TIGR00549 mevalon_kin: mevalonate kinase 10 265 1.1E-67 T 26-04-2016 IPR006205 Mevalonate kinase GO:0004496|GO:0005524|GO:0005737|GO:0008299 KEGG: 00900+2.7.1.36|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-922|UniPathway: UPA00057 smi_1747 421421ff28d922e6e55cadf4e36504a1 292 SUPERFAMILY SSF54211 1 149 6.15E-28 T 26-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold smi_1747 421421ff28d922e6e55cadf4e36504a1 292 PRINTS PR00959 Mevalonate kinase family signature 81 103 3.4E-18 T 26-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 smi_1747 421421ff28d922e6e55cadf4e36504a1 292 PRINTS PR00959 Mevalonate kinase family signature 10 34 3.4E-18 T 26-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 smi_1747 421421ff28d922e6e55cadf4e36504a1 292 PRINTS PR00959 Mevalonate kinase family signature 250 267 3.4E-18 T 26-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 smi_1747 421421ff28d922e6e55cadf4e36504a1 292 SUPERFAMILY SSF55060 159 290 7.92E-33 T 26-04-2016 IPR013750 GHMP kinase, C-terminal domain smi_1747 421421ff28d922e6e55cadf4e36504a1 292 Pfam PF08544 GHMP kinases C terminal 204 283 1.8E-18 T 26-04-2016 IPR013750 GHMP kinase, C-terminal domain smi_1747 421421ff28d922e6e55cadf4e36504a1 292 Gene3D G3DSA:3.30.230.10 4 47 7.2E-10 T 26-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup smi_1747 421421ff28d922e6e55cadf4e36504a1 292 Gene3D G3DSA:3.30.230.10 64 166 5.0E-20 T 26-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup smi_1747 421421ff28d922e6e55cadf4e36504a1 292 Pfam PF00288 GHMP kinases N terminal domain 78 140 2.2E-11 T 26-04-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 smi_1747 421421ff28d922e6e55cadf4e36504a1 292 PANTHER PTHR10457 13 283 1.3E-52 T 26-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 smi_0934 be78e33ce776c9a2360a19099d2a5d82 627 Pfam PF00753 Metallo-beta-lactamase superfamily 40 231 1.4E-10 T 26-04-2016 IPR001279 Metallo-beta-lactamase smi_0934 be78e33ce776c9a2360a19099d2a5d82 627 Gene3D G3DSA:2.10.270.10 493 557 1.7E-12 T 26-04-2016 smi_0934 be78e33ce776c9a2360a19099d2a5d82 627 PANTHER PTHR30619 1 64 3.7E-93 T 26-04-2016 smi_0934 be78e33ce776c9a2360a19099d2a5d82 627 PANTHER PTHR30619 82 359 3.7E-93 T 26-04-2016 smi_0934 be78e33ce776c9a2360a19099d2a5d82 627 Gene3D G3DSA:3.60.15.10 27 278 5.2E-27 T 26-04-2016 IPR001279 Metallo-beta-lactamase smi_0934 be78e33ce776c9a2360a19099d2a5d82 627 Gene3D G3DSA:2.10.270.10 337 372 2.3E-9 T 26-04-2016 smi_0934 be78e33ce776c9a2360a19099d2a5d82 627 SMART SM00849 42 278 5.1E-7 T 26-04-2016 IPR001279 Metallo-beta-lactamase smi_0934 be78e33ce776c9a2360a19099d2a5d82 627 Gene3D G3DSA:2.20.120.10 409 449 4.4E-18 T 26-04-2016 smi_0934 be78e33ce776c9a2360a19099d2a5d82 627 Gene3D G3DSA:2.20.120.10 450 492 1.8E-16 T 26-04-2016 smi_0934 be78e33ce776c9a2360a19099d2a5d82 627 Gene3D G3DSA:2.20.120.10 373 408 3.6E-15 T 26-04-2016 smi_0934 be78e33ce776c9a2360a19099d2a5d82 627 Pfam PF01473 Putative cell wall binding repeat 421 439 0.0081 T 26-04-2016 IPR018337 Cell wall/choline-binding repeat smi_0934 be78e33ce776c9a2360a19099d2a5d82 627 Pfam PF01473 Putative cell wall binding repeat 361 377 0.0011 T 26-04-2016 IPR018337 Cell wall/choline-binding repeat smi_0934 be78e33ce776c9a2360a19099d2a5d82 627 Pfam PF01473 Putative cell wall binding repeat 461 479 3.3E-6 T 26-04-2016 IPR018337 Cell wall/choline-binding repeat smi_0934 be78e33ce776c9a2360a19099d2a5d82 627 Pfam PF01473 Putative cell wall binding repeat 441 459 5.0E-7 T 26-04-2016 IPR018337 Cell wall/choline-binding repeat smi_0934 be78e33ce776c9a2360a19099d2a5d82 627 Pfam PF01473 Putative cell wall binding repeat 381 398 0.37 T 26-04-2016 IPR018337 Cell wall/choline-binding repeat smi_0934 be78e33ce776c9a2360a19099d2a5d82 627 Pfam PF01473 Putative cell wall binding repeat 403 414 0.017 T 26-04-2016 IPR018337 Cell wall/choline-binding repeat smi_0934 be78e33ce776c9a2360a19099d2a5d82 627 Pfam PF01473 Putative cell wall binding repeat 522 538 9.5E-5 T 26-04-2016 IPR018337 Cell wall/choline-binding repeat smi_0934 be78e33ce776c9a2360a19099d2a5d82 627 SUPERFAMILY SSF56281 29 309 6.23E-47 T 26-04-2016 IPR001279 Metallo-beta-lactamase smi_0934 be78e33ce776c9a2360a19099d2a5d82 627 PANTHER PTHR30619:SF1 1 64 3.7E-93 T 26-04-2016 smi_0934 be78e33ce776c9a2360a19099d2a5d82 627 PANTHER PTHR30619:SF1 82 359 3.7E-93 T 26-04-2016 smi_0934 be78e33ce776c9a2360a19099d2a5d82 627 SUPERFAMILY SSF69360 339 561 3.42E-69 T 26-04-2016 smi_0948 00f888f02635fd05c54f62a563054c5c 456 Gene3D G3DSA:3.50.50.60 299 339 1.4E-7 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 smi_0948 00f888f02635fd05c54f62a563054c5c 456 PANTHER PTHR11806 1 454 4.3E-248 T 26-04-2016 smi_0948 00f888f02635fd05c54f62a563054c5c 456 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 358 381 - T 26-04-2016 IPR020595 MnmG-related, conserved site smi_0948 00f888f02635fd05c54f62a563054c5c 456 PANTHER PTHR11806:SF2 1 454 4.3E-248 T 26-04-2016 smi_0948 00f888f02635fd05c54f62a563054c5c 456 Hamap MF_01037 Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO [trmFO]. 18 456 35.925 T 26-04-2016 IPR004417 Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO GO:0005737|GO:0008033|GO:0047151|GO:0050660 smi_0948 00f888f02635fd05c54f62a563054c5c 456 SUPERFAMILY SSF51905 20 387 1.09E-28 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 smi_0948 00f888f02635fd05c54f62a563054c5c 456 Pfam PF01134 Glucose inhibited division protein A 18 388 7.7E-112 T 26-04-2016 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 smi_0948 00f888f02635fd05c54f62a563054c5c 456 Gene3D G3DSA:3.50.50.60 340 414 2.7E-12 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 smi_0948 00f888f02635fd05c54f62a563054c5c 456 Gene3D G3DSA:3.50.50.60 20 241 2.7E-12 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 smi_0948 00f888f02635fd05c54f62a563054c5c 456 TIGRFAM TIGR00137 gid_trmFO: tRNA:m(5)U-54 methyltransferase 18 453 3.3E-208 T 26-04-2016 IPR004417 Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO GO:0005737|GO:0008033|GO:0047151|GO:0050660 smi_1764 7521977005bb405d0239a729aac7e187 425 PANTHER PTHR19446 9 310 2.9E-83 T 26-04-2016 smi_1764 7521977005bb405d0239a729aac7e187 425 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 68 274 8.6E-50 T 26-04-2016 IPR000477 Reverse transcriptase domain smi_1764 7521977005bb405d0239a729aac7e187 425 SUPERFAMILY SSF56672 16 351 2.28E-56 T 26-04-2016 smi_1764 7521977005bb405d0239a729aac7e187 425 TIGRFAM TIGR04416 group_II_RT_mat: group II intron reverse transcriptase/maturase 12 356 1.4E-127 T 26-04-2016 IPR030931 Group II intron reverse transcriptase/maturase smi_1764 7521977005bb405d0239a729aac7e187 425 Pfam PF08388 Group II intron, maturase-specific domain 291 362 3.1E-18 T 26-04-2016 IPR013597 Group II intron, maturase-specific smi_1764 7521977005bb405d0239a729aac7e187 425 PANTHER PTHR19446:SF107 9 310 2.9E-83 T 26-04-2016 smi_1140 7521977005bb405d0239a729aac7e187 425 PANTHER PTHR19446 9 310 2.9E-83 T 26-04-2016 smi_1140 7521977005bb405d0239a729aac7e187 425 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 68 274 8.6E-50 T 26-04-2016 IPR000477 Reverse transcriptase domain smi_1140 7521977005bb405d0239a729aac7e187 425 SUPERFAMILY SSF56672 16 351 2.28E-56 T 26-04-2016 smi_1140 7521977005bb405d0239a729aac7e187 425 TIGRFAM TIGR04416 group_II_RT_mat: group II intron reverse transcriptase/maturase 12 356 1.4E-127 T 26-04-2016 IPR030931 Group II intron reverse transcriptase/maturase smi_1140 7521977005bb405d0239a729aac7e187 425 Pfam PF08388 Group II intron, maturase-specific domain 291 362 3.1E-18 T 26-04-2016 IPR013597 Group II intron, maturase-specific smi_1140 7521977005bb405d0239a729aac7e187 425 PANTHER PTHR19446:SF107 9 310 2.9E-83 T 26-04-2016 smi_1815 b6017e13236a91bd39a411b5dbec2db3 771 Pfam PF02901 Pyruvate formate lyase-like 32 614 8.3E-146 T 26-04-2016 IPR004184 Pyruvate formate lyase domain GO:0003824 smi_1815 b6017e13236a91bd39a411b5dbec2db3 771 TIGRFAM TIGR01255 pyr_form_ly_1: formate acetyltransferase 16 764 0.0 T 26-04-2016 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493|UniPathway: UPA00920 smi_1815 b6017e13236a91bd39a411b5dbec2db3 771 PANTHER PTHR30191 1 764 0.0 T 26-04-2016 smi_1815 b6017e13236a91bd39a411b5dbec2db3 771 Pfam PF01228 Glycine radical 643 743 7.4E-22 T 26-04-2016 IPR001150 Glycine radical domain GO:0003824|GO:0008152 smi_1815 b6017e13236a91bd39a411b5dbec2db3 771 Gene3D G3DSA:3.20.70.20 10 763 1.4E-229 T 26-04-2016 smi_1815 b6017e13236a91bd39a411b5dbec2db3 771 PIRSF PIRSF000379 13 764 1.0E-287 T 26-04-2016 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493|UniPathway: UPA00920 smi_1815 b6017e13236a91bd39a411b5dbec2db3 771 PANTHER PTHR30191:SF0 1 764 0.0 T 26-04-2016 smi_1815 b6017e13236a91bd39a411b5dbec2db3 771 ProSitePatterns PS00850 Glycine radical domain signature. 734 742 - T 26-04-2016 IPR019777 Formate C-acetyltransferase glycine radical, conserved site smi_1815 b6017e13236a91bd39a411b5dbec2db3 771 SUPERFAMILY SSF51998 11 763 1.05E-200 T 26-04-2016 smi_0747 1d0da48ea22a86b6a88a1d57ea980a96 388 Gene3D G3DSA:3.30.420.10 209 358 1.3E-5 T 26-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 smi_0747 1d0da48ea22a86b6a88a1d57ea980a96 388 Pfam PF13936 Helix-turn-helix domain 4 47 1.4E-16 T 26-04-2016 IPR025246 Transposase IS30-like HTH domain smi_0747 1d0da48ea22a86b6a88a1d57ea980a96 388 SUPERFAMILY SSF53098 207 358 2.88E-9 T 26-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 smi_0747 1d0da48ea22a86b6a88a1d57ea980a96 388 PANTHER PTHR10948 1 372 3.2E-15 T 26-04-2016 smi_1409 1d0da48ea22a86b6a88a1d57ea980a96 388 Gene3D G3DSA:3.30.420.10 209 358 1.3E-5 T 26-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 smi_1409 1d0da48ea22a86b6a88a1d57ea980a96 388 Pfam PF13936 Helix-turn-helix domain 4 47 1.4E-16 T 26-04-2016 IPR025246 Transposase IS30-like HTH domain smi_1409 1d0da48ea22a86b6a88a1d57ea980a96 388 SUPERFAMILY SSF53098 207 358 2.88E-9 T 26-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 smi_1409 1d0da48ea22a86b6a88a1d57ea980a96 388 PANTHER PTHR10948 1 372 3.2E-15 T 26-04-2016 smi_1101 ce94d3c47a153b16396e7ea623e92669 256 SUPERFAMILY SSF52540 23 198 3.43E-14 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1101 ce94d3c47a153b16396e7ea623e92669 256 Pfam PF06414 Zeta toxin 24 215 1.5E-59 T 26-04-2016 IPR010488 Zeta toxin domain GO:0005524|GO:0016301 smi_1101 ce94d3c47a153b16396e7ea623e92669 256 Gene3D G3DSA:3.40.50.300 9 252 6.4E-44 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1579 f13cae68613cc03fc0a85de3fcaa3064 266 SMART SM00062 31 257 4.8E-41 T 26-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF smi_1579 f13cae68613cc03fc0a85de3fcaa3064 266 Gene3D G3DSA:3.40.190.10 109 213 2.2E-17 T 26-04-2016 smi_1579 f13cae68613cc03fc0a85de3fcaa3064 266 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 32 255 2.0E-47 T 26-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF smi_1579 f13cae68613cc03fc0a85de3fcaa3064 266 PANTHER PTHR18966 25 254 2.2E-18 T 26-04-2016 smi_1579 f13cae68613cc03fc0a85de3fcaa3064 266 SUPERFAMILY SSF53850 1 257 1.23E-46 T 26-04-2016 smi_1579 f13cae68613cc03fc0a85de3fcaa3064 266 PANTHER PTHR18966:SF216 25 254 2.2E-18 T 26-04-2016 smi_1579 f13cae68613cc03fc0a85de3fcaa3064 266 Gene3D G3DSA:3.40.190.10 28 108 1.1E-30 T 26-04-2016 smi_1579 f13cae68613cc03fc0a85de3fcaa3064 266 Gene3D G3DSA:3.40.190.10 216 257 1.1E-30 T 26-04-2016 smi_0669 49e168cad152bfb054bdcedf2178b667 321 Gene3D G3DSA:3.90.550.10 1 168 3.3E-30 T 26-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases smi_0669 49e168cad152bfb054bdcedf2178b667 321 Pfam PF00535 Glycosyl transferase family 2 4 168 2.0E-33 T 26-04-2016 IPR001173 Glycosyltransferase 2-like smi_0669 49e168cad152bfb054bdcedf2178b667 321 SUPERFAMILY SSF53448 2 233 1.97E-44 T 26-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases smi_0669 49e168cad152bfb054bdcedf2178b667 321 PANTHER PTHR10859 1 308 3.6E-165 T 26-04-2016 smi_0669 49e168cad152bfb054bdcedf2178b667 321 PANTHER PTHR10859:SF81 1 308 3.6E-165 T 26-04-2016 smi_1445 845b520471ecc5f28fb9a1c73cdf65c8 210 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 10 178 8.0E-48 T 26-04-2016 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|UniPathway: UPA00070 smi_1445 845b520471ecc5f28fb9a1c73cdf65c8 210 SUPERFAMILY SSF53271 4 207 3.67E-52 T 26-04-2016 IPR029057 Phosphoribosyltransferase-like smi_1445 845b520471ecc5f28fb9a1c73cdf65c8 210 Pfam PF00156 Phosphoribosyl transferase domain 48 166 3.5E-18 T 26-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 smi_1445 845b520471ecc5f28fb9a1c73cdf65c8 210 PANTHER PTHR19278 3 210 1.8E-67 T 26-04-2016 smi_1445 845b520471ecc5f28fb9a1c73cdf65c8 210 Gene3D G3DSA:3.40.50.2020 3 208 2.3E-60 T 26-04-2016 IPR029057 Phosphoribosyltransferase-like smi_1445 845b520471ecc5f28fb9a1c73cdf65c8 210 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 210 31.202 T 26-04-2016 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|UniPathway: UPA00070 smi_0730 bb5e59efeaeb4b012b3c7ae4f4b3b094 257 PRINTS PR00377 Inositol monophosphatase superfamily signature 201 225 3.7E-20 T 26-04-2016 IPR000760 Inositol monophosphatase GO:0046854 smi_0730 bb5e59efeaeb4b012b3c7ae4f4b3b094 257 PRINTS PR00377 Inositol monophosphatase superfamily signature 80 96 3.7E-20 T 26-04-2016 IPR000760 Inositol monophosphatase GO:0046854 smi_0730 bb5e59efeaeb4b012b3c7ae4f4b3b094 257 PRINTS PR00377 Inositol monophosphatase superfamily signature 37 57 3.7E-20 T 26-04-2016 IPR000760 Inositol monophosphatase GO:0046854 smi_0730 bb5e59efeaeb4b012b3c7ae4f4b3b094 257 PRINTS PR00377 Inositol monophosphatase superfamily signature 171 192 3.7E-20 T 26-04-2016 IPR000760 Inositol monophosphatase GO:0046854 smi_0730 bb5e59efeaeb4b012b3c7ae4f4b3b094 257 PRINTS PR00377 Inositol monophosphatase superfamily signature 59 75 3.7E-20 T 26-04-2016 IPR000760 Inositol monophosphatase GO:0046854 smi_0730 bb5e59efeaeb4b012b3c7ae4f4b3b094 257 PANTHER PTHR20854 1 243 4.4E-57 T 26-04-2016 IPR000760 Inositol monophosphatase GO:0046854 smi_0730 bb5e59efeaeb4b012b3c7ae4f4b3b094 257 Gene3D G3DSA:3.40.190.80 158 250 7.2E-17 T 26-04-2016 smi_0730 bb5e59efeaeb4b012b3c7ae4f4b3b094 257 SUPERFAMILY SSF56655 3 252 8.77E-60 T 26-04-2016 smi_0730 bb5e59efeaeb4b012b3c7ae4f4b3b094 257 Gene3D G3DSA:3.30.540.10 3 153 2.9E-37 T 26-04-2016 smi_0730 bb5e59efeaeb4b012b3c7ae4f4b3b094 257 PANTHER PTHR20854:SF4 1 243 4.4E-57 T 26-04-2016 smi_0730 bb5e59efeaeb4b012b3c7ae4f4b3b094 257 Pfam PF00459 Inositol monophosphatase family 6 251 1.5E-42 T 26-04-2016 IPR000760 Inositol monophosphatase GO:0046854 smi_1187 d04393ff06dcfa211e23fe1b06fd8821 83 Pfam PF15507 Domain of unknown function (DUF4649) 15 79 2.2E-27 T 26-04-2016 IPR027879 Protein of unknown function DUF4649 smi_1254 79a1f949d89e8084ee23ae2cfa457ee2 125 Pfam PF09148 Domain of unknown function (DUF1934) 3 122 7.8E-19 T 26-04-2016 IPR015231 Protein of unknown function DUF1934 smi_1254 79a1f949d89e8084ee23ae2cfa457ee2 125 SUPERFAMILY SSF50814 1 124 5.05E-33 T 26-04-2016 IPR011038 Calycin-like smi_1254 79a1f949d89e8084ee23ae2cfa457ee2 125 Gene3D G3DSA:2.40.128.20 1 124 1.7E-27 T 26-04-2016 IPR012674 Calycin smi_1194 6159b219ee38b8d92811d1a82cf8c8bc 183 TIGRFAM TIGR02113 coaC_strep: phosphopantothenoylcysteine decarboxylase 3 177 8.1E-96 T 26-04-2016 IPR011847 Phosphopantothenoylcysteine decarboxylase KEGG: 00770+4.1.1.36|UniPathway: UPA00241 smi_1194 6159b219ee38b8d92811d1a82cf8c8bc 183 SUPERFAMILY SSF52507 3 174 1.44E-56 T 26-04-2016 IPR003382 Flavoprotein GO:0003824 smi_1194 6159b219ee38b8d92811d1a82cf8c8bc 183 Pfam PF02441 Flavoprotein 3 132 7.5E-40 T 26-04-2016 IPR003382 Flavoprotein GO:0003824 smi_1194 6159b219ee38b8d92811d1a82cf8c8bc 183 PANTHER PTHR14359:SF20 1 181 4.5E-78 T 26-04-2016 smi_1194 6159b219ee38b8d92811d1a82cf8c8bc 183 Gene3D G3DSA:3.40.50.1950 3 182 2.0E-64 T 26-04-2016 IPR003382 Flavoprotein GO:0003824 smi_1194 6159b219ee38b8d92811d1a82cf8c8bc 183 PANTHER PTHR14359 1 181 4.5E-78 T 26-04-2016 smi_1656 831e1919f0c5b110d06baca6e504c7b0 406 SUPERFAMILY SSF53448 8 259 3.66E-60 T 26-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases smi_1656 831e1919f0c5b110d06baca6e504c7b0 406 Gene3D G3DSA:3.90.550.10 8 256 2.6E-61 T 26-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases smi_1656 831e1919f0c5b110d06baca6e504c7b0 406 PANTHER PTHR11183:SF39 100 248 3.9E-12 T 26-04-2016 smi_1656 831e1919f0c5b110d06baca6e504c7b0 406 Pfam PF01501 Glycosyl transferase family 8 8 237 1.6E-35 T 26-04-2016 IPR002495 Glycosyl transferase, family 8 GO:0016757 smi_1656 831e1919f0c5b110d06baca6e504c7b0 406 PANTHER PTHR11183 100 248 3.9E-12 T 26-04-2016 smi_2025 7e579bf2984eb885387bac5358c34878 268 SUPERFAMILY SSF81345 4 260 7.72E-37 T 26-04-2016 IPR029022 ABC transporter, BtuC-like smi_2025 7e579bf2984eb885387bac5358c34878 268 PANTHER PTHR30477:SF0 1 267 2.8E-85 T 26-04-2016 smi_2025 7e579bf2984eb885387bac5358c34878 268 Gene3D G3DSA:1.10.3470.10 14 264 2.4E-8 T 26-04-2016 IPR029022 ABC transporter, BtuC-like smi_2025 7e579bf2984eb885387bac5358c34878 268 PANTHER PTHR30477 1 267 2.8E-85 T 26-04-2016 smi_2025 7e579bf2984eb885387bac5358c34878 268 Pfam PF00950 ABC 3 transport family 6 263 3.2E-83 T 26-04-2016 IPR001626 ABC-3 GO:0005524|GO:0006810|GO:0016020|GO:0042626 smi_2087 dd5c6f1aa52861e9968feacc36bf5a62 159 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 159 30.057 T 26-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 smi_2087 dd5c6f1aa52861e9968feacc36bf5a62 159 Pfam PF02590 Predicted SPOUT methyltransferase 1 158 4.3E-56 T 26-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 smi_2087 dd5c6f1aa52861e9968feacc36bf5a62 159 PANTHER PTHR33603:SF1 1 159 1.7E-63 T 26-04-2016 smi_2087 dd5c6f1aa52861e9968feacc36bf5a62 159 PANTHER PTHR33603 1 159 1.7E-63 T 26-04-2016 smi_2087 dd5c6f1aa52861e9968feacc36bf5a62 159 PIRSF PIRSF004505 1 159 1.3E-52 T 26-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 smi_2087 dd5c6f1aa52861e9968feacc36bf5a62 159 TIGRFAM TIGR00246 tRNA_RlmH_YbeA: rRNA large subunit m3Psi methyltransferase RlmH 2 159 4.6E-52 T 26-04-2016 IPR016051 Ribosomal RNA large subunit methyltransferase H GO:0005737|GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 smi_2087 dd5c6f1aa52861e9968feacc36bf5a62 159 SUPERFAMILY SSF75217 1 157 9.94E-55 T 26-04-2016 IPR029028 Alpha/beta knot methyltransferases smi_2087 dd5c6f1aa52861e9968feacc36bf5a62 159 Gene3D G3DSA:3.40.1280.10 1 159 1.4E-60 T 26-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal smi_0992 2a9e6ef983a70c245141bfbcd62d05d3 369 Gene3D G3DSA:1.10.10.10 208 259 1.1E-26 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain smi_0992 2a9e6ef983a70c245141bfbcd62d05d3 369 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 131 367 3.3E-124 T 26-04-2016 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 smi_0992 2a9e6ef983a70c245141bfbcd62d05d3 369 Pfam PF00140 Sigma-70 factor, region 1.2 97 128 5.9E-14 T 26-04-2016 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 smi_0992 2a9e6ef983a70c245141bfbcd62d05d3 369 SUPERFAMILY SSF88659 208 282 1.31E-21 T 26-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 smi_0992 2a9e6ef983a70c245141bfbcd62d05d3 369 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 131 356 3.8E-38 T 26-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 smi_0992 2a9e6ef983a70c245141bfbcd62d05d3 369 Pfam PF03979 Sigma-70 factor, region 1.1 14 85 7.0E-10 T 26-04-2016 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 smi_0992 2a9e6ef983a70c245141bfbcd62d05d3 369 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 159 172 - T 26-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 smi_0992 2a9e6ef983a70c245141bfbcd62d05d3 369 Gene3D G3DSA:1.10.10.10 297 368 3.1E-33 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain smi_0992 2a9e6ef983a70c245141bfbcd62d05d3 369 SUPERFAMILY SSF88659 265 365 2.43E-28 T 26-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 smi_0992 2a9e6ef983a70c245141bfbcd62d05d3 369 PANTHER PTHR30603 5 368 8.9E-205 T 26-04-2016 smi_0992 2a9e6ef983a70c245141bfbcd62d05d3 369 SUPERFAMILY SSF88946 96 205 1.96E-53 T 26-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 smi_0992 2a9e6ef983a70c245141bfbcd62d05d3 369 Pfam PF04539 Sigma-70 region 3 214 290 5.7E-30 T 26-04-2016 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 smi_0992 2a9e6ef983a70c245141bfbcd62d05d3 369 PANTHER PTHR30603:SF0 5 368 8.9E-205 T 26-04-2016 smi_0992 2a9e6ef983a70c245141bfbcd62d05d3 369 PRINTS PR00046 Major sigma-70 factor signature 328 343 1.38E-31 T 26-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 smi_0992 2a9e6ef983a70c245141bfbcd62d05d3 369 PRINTS PR00046 Major sigma-70 factor signature 307 319 1.38E-31 T 26-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 smi_0992 2a9e6ef983a70c245141bfbcd62d05d3 369 PRINTS PR00046 Major sigma-70 factor signature 183 191 1.38E-31 T 26-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 smi_0992 2a9e6ef983a70c245141bfbcd62d05d3 369 PRINTS PR00046 Major sigma-70 factor signature 159 172 1.38E-31 T 26-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 smi_0992 2a9e6ef983a70c245141bfbcd62d05d3 369 PRINTS PR00046 Major sigma-70 factor signature 343 354 1.38E-31 T 26-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 smi_0992 2a9e6ef983a70c245141bfbcd62d05d3 369 Pfam PF04542 Sigma-70 region 2 135 204 5.3E-23 T 26-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 smi_0992 2a9e6ef983a70c245141bfbcd62d05d3 369 Pfam PF04545 Sigma-70, region 4 303 356 4.6E-19 T 26-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 smi_0992 2a9e6ef983a70c245141bfbcd62d05d3 369 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 2 368 32.978 T 26-04-2016 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 smi_0992 2a9e6ef983a70c245141bfbcd62d05d3 369 Gene3D G3DSA:1.10.601.10 24 204 2.4E-73 T 26-04-2016 smi_0992 2a9e6ef983a70c245141bfbcd62d05d3 369 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 328 354 - T 26-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 smi_0960 1c6cf600a2e2a29e2c010544ba2c767b 66 PANTHER PTHR33343 1 66 3.7E-23 T 26-04-2016 smi_0960 1c6cf600a2e2a29e2c010544ba2c767b 66 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 63 8.4E-22 T 26-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 smi_0960 1c6cf600a2e2a29e2c010544ba2c767b 66 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 64 17.798 T 26-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 smi_0960 1c6cf600a2e2a29e2c010544ba2c767b 66 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 31 - T 26-04-2016 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_0960 1c6cf600a2e2a29e2c010544ba2c767b 66 Pfam PF01632 Ribosomal protein L35 2 62 2.3E-21 T 26-04-2016 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_0960 1c6cf600a2e2a29e2c010544ba2c767b 66 SUPERFAMILY SSF143034 2 62 2.22E-19 T 26-04-2016 smi_0960 1c6cf600a2e2a29e2c010544ba2c767b 66 PRINTS PR00064 Ribosomal protein L35 signature 36 54 8.6E-17 T 26-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 smi_0960 1c6cf600a2e2a29e2c010544ba2c767b 66 PRINTS PR00064 Ribosomal protein L35 signature 3 20 8.6E-17 T 26-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 smi_0960 1c6cf600a2e2a29e2c010544ba2c767b 66 PRINTS PR00064 Ribosomal protein L35 signature 21 35 8.6E-17 T 26-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 smi_1052 495f55318f999bbc2a9500e762397104 191 PANTHER PTHR28629 1 191 2.0E-58 T 26-04-2016 smi_1052 495f55318f999bbc2a9500e762397104 191 SUPERFAMILY SSF101473 1 187 1.19E-56 T 26-04-2016 IPR004007 DhaL domain GO:0004371|GO:0006071 smi_1052 495f55318f999bbc2a9500e762397104 191 SMART SM01120 30 187 6.2E-68 T 26-04-2016 IPR004007 DhaL domain GO:0004371|GO:0006071 smi_1052 495f55318f999bbc2a9500e762397104 191 TIGRFAM TIGR02365 dha_L_ycgS: dihydroxyacetone kinase, L subunit 7 186 7.3E-69 T 26-04-2016 IPR012737 Dihydroxyacetone kinase, subunit L GO:0016772 KEGG: 00563+2.7.-.- smi_1052 495f55318f999bbc2a9500e762397104 191 Pfam PF02734 DAK2 domain 30 186 1.3E-45 T 26-04-2016 IPR004007 DhaL domain GO:0004371|GO:0006071 smi_0635 f53ae90818007b551c565d22df1f1d5a 282 Pfam PF00950 ABC 3 transport family 12 266 3.2E-88 T 26-04-2016 IPR001626 ABC-3 GO:0005524|GO:0006810|GO:0016020|GO:0042626 smi_0635 f53ae90818007b551c565d22df1f1d5a 282 Gene3D G3DSA:1.10.3470.10 14 262 5.2E-11 T 26-04-2016 IPR029022 ABC transporter, BtuC-like smi_0635 f53ae90818007b551c565d22df1f1d5a 282 PANTHER PTHR30477 4 282 1.2E-128 T 26-04-2016 smi_0635 f53ae90818007b551c565d22df1f1d5a 282 SUPERFAMILY SSF81345 11 262 9.94E-43 T 26-04-2016 IPR029022 ABC transporter, BtuC-like smi_0635 f53ae90818007b551c565d22df1f1d5a 282 PANTHER PTHR30477:SF13 4 282 1.2E-128 T 26-04-2016 smi_1297 7655d099a285d2bd925c16b81f216319 279 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 42 268 9.1E-63 T 26-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF smi_1297 7655d099a285d2bd925c16b81f216319 279 SUPERFAMILY SSF53850 5 269 4.87E-68 T 26-04-2016 smi_1297 7655d099a285d2bd925c16b81f216319 279 Gene3D G3DSA:3.40.190.10 119 228 7.6E-23 T 26-04-2016 smi_1297 7655d099a285d2bd925c16b81f216319 279 SMART SM00062 41 269 1.5E-66 T 26-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF smi_1297 7655d099a285d2bd925c16b81f216319 279 SMART SM00079 41 268 7.7E-4 T 26-04-2016 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 smi_1297 7655d099a285d2bd925c16b81f216319 279 PANTHER PTHR18966 38 270 2.8E-35 T 26-04-2016 smi_1297 7655d099a285d2bd925c16b81f216319 279 Gene3D G3DSA:3.40.190.10 229 271 1.7E-42 T 26-04-2016 smi_1297 7655d099a285d2bd925c16b81f216319 279 Gene3D G3DSA:3.40.190.10 37 118 1.7E-42 T 26-04-2016 smi_1146 0e79c1c19dde358411023b4a86734512 143 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 2 132 2.3E-34 T 26-04-2016 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 smi_1146 0e79c1c19dde358411023b4a86734512 143 PANTHER PTHR31272:SF4 1 143 3.1E-44 T 26-04-2016 smi_1146 0e79c1c19dde358411023b4a86734512 143 PANTHER PTHR31272 1 143 3.1E-44 T 26-04-2016 smi_2070 28ed22d96522110d3aef7bb601e9aa0f 275 SUPERFAMILY SSF47413 2 67 3.15E-5 T 26-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 smi_2070 28ed22d96522110d3aef7bb601e9aa0f 275 PANTHER PTHR34475:SF1 1 275 2.6E-44 T 26-04-2016 smi_2070 28ed22d96522110d3aef7bb601e9aa0f 275 Gene3D G3DSA:1.10.260.40 3 75 2.3E-6 T 26-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 smi_2070 28ed22d96522110d3aef7bb601e9aa0f 275 PANTHER PTHR34475 1 275 2.6E-44 T 26-04-2016 smi_2070 28ed22d96522110d3aef7bb601e9aa0f 275 Pfam PF13413 Helix-turn-helix domain 10 68 1.1E-20 T 26-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 smi_1647 cc46aabd47fb4e02071fbe87ba0645f0 445 Hamap MF_01473 Glycosyltransferase stabilizing protein Gtf2 [gtf2]. 1 440 35.446 T 26-04-2016 IPR014268 Glycosyltransferase-stabilising protein Gtf2 GO:0031647 smi_1647 cc46aabd47fb4e02071fbe87ba0645f0 445 TIGRFAM TIGR02919 TIGR02919: accessory Sec system glycosyltransferase GtfB 1 439 5.6E-189 T 26-04-2016 IPR014268 Glycosyltransferase-stabilising protein Gtf2 GO:0031647 smi_1006 94a45f697e36868a19ab328e9da62bb9 328 PIRSF PIRSF000102 4 324 3.2E-106 T 26-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 smi_1006 94a45f697e36868a19ab328e9da62bb9 328 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 9 148 2.4E-45 T 26-04-2016 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 smi_1006 94a45f697e36868a19ab328e9da62bb9 328 Hamap MF_00488 L-lactate dehydrogenase [ldh]. 7 317 45.014 T 26-04-2016 IPR011304 L-lactate dehydrogenase GO:0004459|GO:0005737|GO:0055114 KEGG: 00010+1.1.1.27|KEGG: 00270+1.1.1.27|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-6901|UniPathway: UPA00554 smi_1006 94a45f697e36868a19ab328e9da62bb9 328 Gene3D G3DSA:3.90.110.10 150 316 2.9E-63 T 26-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 smi_1006 94a45f697e36868a19ab328e9da62bb9 328 PANTHER PTHR11540 2 327 6.0E-156 T 26-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 smi_1006 94a45f697e36868a19ab328e9da62bb9 328 SUPERFAMILY SSF56327 149 316 8.94E-57 T 26-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 smi_1006 94a45f697e36868a19ab328e9da62bb9 328 ProSitePatterns PS00064 L-lactate dehydrogenase active site. 178 184 - T 26-04-2016 IPR018177 L-lactate dehydrogenase, active site GO:0004459|GO:0055114 KEGG: 00010+1.1.1.27|KEGG: 00270+1.1.1.27|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-6901|UniPathway: UPA00554 smi_1006 94a45f697e36868a19ab328e9da62bb9 328 PRINTS PR00086 L-lactate dehydrogenase signature 146 164 1.17E-44 T 26-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 smi_1006 94a45f697e36868a19ab328e9da62bb9 328 PRINTS PR00086 L-lactate dehydrogenase signature 122 142 1.17E-44 T 26-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 smi_1006 94a45f697e36868a19ab328e9da62bb9 328 PRINTS PR00086 L-lactate dehydrogenase signature 36 60 1.17E-44 T 26-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 smi_1006 94a45f697e36868a19ab328e9da62bb9 328 PRINTS PR00086 L-lactate dehydrogenase signature 9 33 1.17E-44 T 26-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 smi_1006 94a45f697e36868a19ab328e9da62bb9 328 PRINTS PR00086 L-lactate dehydrogenase signature 176 189 1.17E-44 T 26-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 smi_1006 94a45f697e36868a19ab328e9da62bb9 328 PANTHER PTHR11540:SF3 2 327 6.0E-156 T 26-04-2016 smi_1006 94a45f697e36868a19ab328e9da62bb9 328 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 151 317 1.6E-41 T 26-04-2016 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 smi_1006 94a45f697e36868a19ab328e9da62bb9 328 TIGRFAM TIGR01771 L-LDH-NAD: L-lactate dehydrogenase 12 310 3.1E-124 T 26-04-2016 IPR011304 L-lactate dehydrogenase GO:0004459|GO:0005737|GO:0055114 KEGG: 00010+1.1.1.27|KEGG: 00270+1.1.1.27|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-6901|UniPathway: UPA00554 smi_1006 94a45f697e36868a19ab328e9da62bb9 328 Gene3D G3DSA:3.40.50.720 3 149 2.0E-50 T 26-04-2016 IPR016040 NAD(P)-binding domain smi_1006 94a45f697e36868a19ab328e9da62bb9 328 SUPERFAMILY SSF51735 4 150 3.05E-50 T 26-04-2016 IPR016040 NAD(P)-binding domain smi_1779 452a88e720234f41903c438690e93d11 501 ProSitePatterns PS01023 PTR2 family proton/oligopeptide symporters signature 2. 158 170 - T 26-04-2016 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 smi_1779 452a88e720234f41903c438690e93d11 501 PANTHER PTHR11654:SF119 60 233 2.7E-111 T 26-04-2016 smi_1779 452a88e720234f41903c438690e93d11 501 PANTHER PTHR11654:SF119 279 500 2.7E-111 T 26-04-2016 smi_1779 452a88e720234f41903c438690e93d11 501 Pfam PF00854 POT family 96 470 8.1E-69 T 26-04-2016 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 smi_1779 452a88e720234f41903c438690e93d11 501 Gene3D G3DSA:1.20.1250.20 36 201 3.0E-13 T 26-04-2016 smi_1779 452a88e720234f41903c438690e93d11 501 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 57 497 9.4E-103 T 26-04-2016 IPR005279 Dipeptide/tripeptide permease GO:0015197|GO:0015833|GO:0016020 smi_1779 452a88e720234f41903c438690e93d11 501 SUPERFAMILY SSF103473 59 316 7.46E-19 T 26-04-2016 IPR020846 Major facilitator superfamily domain smi_1779 452a88e720234f41903c438690e93d11 501 SUPERFAMILY SSF103473 339 492 9.29E-10 T 26-04-2016 IPR020846 Major facilitator superfamily domain smi_1779 452a88e720234f41903c438690e93d11 501 PANTHER PTHR11654 60 233 2.7E-111 T 26-04-2016 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 smi_1779 452a88e720234f41903c438690e93d11 501 PANTHER PTHR11654 279 500 2.7E-111 T 26-04-2016 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 smi_1779 452a88e720234f41903c438690e93d11 501 ProSitePatterns PS01022 PTR2 family proton/oligopeptide symporters signature 1. 84 108 - T 26-04-2016 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 smi_1779 452a88e720234f41903c438690e93d11 501 Gene3D G3DSA:1.20.1250.20 328 492 1.7E-4 T 26-04-2016 smi_0793 433f281ba30d76ed7873e7511c5c72d8 233 Pfam PF04131 Putative N-acetylmannosamine-6-phosphate epimerase 38 233 7.5E-83 T 26-04-2016 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase GO:0006051|GO:0047465 KEGG: 00520+5.1.3.9|UniPathway: UPA00629 smi_0793 433f281ba30d76ed7873e7511c5c72d8 233 Hamap MF_01235 Putative N-acetylmannosamine-6-phosphate 2-epimerase [nanE]. 12 233 40.485 T 26-04-2016 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase GO:0006051|GO:0047465 KEGG: 00520+5.1.3.9|UniPathway: UPA00629 smi_0793 433f281ba30d76ed7873e7511c5c72d8 233 PANTHER PTHR36204:SF1 3 233 3.6E-105 T 26-04-2016 smi_0793 433f281ba30d76ed7873e7511c5c72d8 233 Gene3D G3DSA:3.20.20.70 4 233 1.1E-93 T 26-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 smi_0793 433f281ba30d76ed7873e7511c5c72d8 233 PANTHER PTHR36204 3 233 3.6E-105 T 26-04-2016 smi_0793 433f281ba30d76ed7873e7511c5c72d8 233 SUPERFAMILY SSF51366 14 232 5.65E-55 T 26-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 smi_0598 387183744dd240616833b753d3b33304 308 Pfam PF12784 PD-(D/E)XK nuclease family transposase 10 230 7.6E-22 T 26-04-2016 smi_0598 387183744dd240616833b753d3b33304 308 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 12 301 1.7E-21 T 26-04-2016 IPR010106 Conserved hypothetical protein CHP01784 smi_0822 9d191751e1caa37370ef94db6a724368 274 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 77 258 7.5E-52 T 26-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 smi_0822 9d191751e1caa37370ef94db6a724368 274 Gene3D G3DSA:2.40.100.10 65 262 7.6E-67 T 26-04-2016 IPR029000 Cyclophilin-like domain smi_0822 9d191751e1caa37370ef94db6a724368 274 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 115 127 2.2E-8 T 26-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 smi_0822 9d191751e1caa37370ef94db6a724368 274 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 166 181 2.2E-8 T 26-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 smi_0822 9d191751e1caa37370ef94db6a724368 274 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 89 104 2.2E-8 T 26-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 smi_0822 9d191751e1caa37370ef94db6a724368 274 PANTHER PTHR11071:SF282 209 270 8.9E-102 T 26-04-2016 smi_0822 9d191751e1caa37370ef94db6a724368 274 PANTHER PTHR11071:SF282 6 186 8.9E-102 T 26-04-2016 smi_0822 9d191751e1caa37370ef94db6a724368 274 SUPERFAMILY SSF50891 76 262 1.02E-55 T 26-04-2016 IPR029000 Cyclophilin-like domain smi_0822 9d191751e1caa37370ef94db6a724368 274 PANTHER PTHR11071 209 270 8.9E-102 T 26-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 smi_0822 9d191751e1caa37370ef94db6a724368 274 PANTHER PTHR11071 6 186 8.9E-102 T 26-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 smi_0515 a2380b1026d46ecc605b7bc349c08c58 242 Pfam PF00005 ABC transporter 17 163 1.0E-35 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 smi_0515 a2380b1026d46ecc605b7bc349c08c58 242 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 26-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 smi_0515 a2380b1026d46ecc605b7bc349c08c58 242 Gene3D G3DSA:3.40.50.300 1 234 3.7E-79 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0515 a2380b1026d46ecc605b7bc349c08c58 242 SMART SM00382 26 213 3.0E-16 T 26-04-2016 IPR003593 AAA+ ATPase domain smi_0515 a2380b1026d46ecc605b7bc349c08c58 242 SUPERFAMILY SSF52540 1 237 2.1E-73 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0515 a2380b1026d46ecc605b7bc349c08c58 242 PANTHER PTHR24220 3 242 4.2E-136 T 26-04-2016 smi_0515 a2380b1026d46ecc605b7bc349c08c58 242 PANTHER PTHR24220:SF434 3 242 4.2E-136 T 26-04-2016 smi_0094 4c454d59bca305f4815810e6abf56cc8 203 SMART SM01390 3 92 2.0E-39 T 26-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 smi_0094 4c454d59bca305f4815810e6abf56cc8 203 Pfam PF01479 S4 domain 93 140 1.7E-22 T 26-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 smi_0094 4c454d59bca305f4815810e6abf56cc8 203 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 201 35.128 T 26-04-2016 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 smi_0094 4c454d59bca305f4815810e6abf56cc8 203 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 92 2.9E-24 T 26-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 smi_0094 4c454d59bca305f4815810e6abf56cc8 203 SMART SM00363 93 157 3.6E-21 T 26-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 smi_0094 4c454d59bca305f4815810e6abf56cc8 203 SUPERFAMILY SSF55174 3 201 4.84E-67 T 26-04-2016 smi_0094 4c454d59bca305f4815810e6abf56cc8 203 ProSitePatterns PS00632 Ribosomal protein S4 signature. 91 115 - T 26-04-2016 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 smi_0094 4c454d59bca305f4815810e6abf56cc8 203 Gene3D G3DSA:1.10.1050.10 1 96 4.0E-37 T 26-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 smi_0094 4c454d59bca305f4815810e6abf56cc8 203 Gene3D G3DSA:3.10.290.10 97 192 1.9E-34 T 26-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 smi_0094 4c454d59bca305f4815810e6abf56cc8 203 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 201 3.7E-76 T 26-04-2016 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 smi_0094 4c454d59bca305f4815810e6abf56cc8 203 PANTHER PTHR11831:SF4 1 199 1.4E-84 T 26-04-2016 smi_0094 4c454d59bca305f4815810e6abf56cc8 203 PANTHER PTHR11831 1 199 1.4E-84 T 26-04-2016 IPR022801 Ribosomal protein S4/S9 smi_1420 edaaabd54691d77e6a5b4eba7c0028ef 155 SUPERFAMILY SSF53927 9 141 1.84E-35 T 26-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 smi_1420 edaaabd54691d77e6a5b4eba7c0028ef 155 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 8 117 7.1E-26 T 26-04-2016 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 smi_1420 edaaabd54691d77e6a5b4eba7c0028ef 155 Gene3D G3DSA:3.40.140.10 7 148 4.3E-40 T 26-04-2016 smi_1420 edaaabd54691d77e6a5b4eba7c0028ef 155 PIRSF PIRSF006019 1 152 9.6E-49 T 26-04-2016 IPR016473 Deoxycytidylate deaminase GO:0004132|GO:0006220|GO:0008270 KEGG: 00240+3.5.4.12|MetaCyc: PWY-7210 smi_1420 edaaabd54691d77e6a5b4eba7c0028ef 155 PANTHER PTHR11086 3 131 5.7E-52 T 26-04-2016 IPR015517 Deoxycytidylate deaminase-related smi_1420 edaaabd54691d77e6a5b4eba7c0028ef 155 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 72 106 - T 26-04-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 smi_0591 9b0beb385e2faae561a7ab90b5a7488d 343 PIRSF PIRSF001361 2 343 3.6E-117 T 26-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 smi_0591 9b0beb385e2faae561a7ab90b5a7488d 343 Pfam PF00793 DAHP synthetase I family 33 333 1.1E-49 T 26-04-2016 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 smi_0591 9b0beb385e2faae561a7ab90b5a7488d 343 SUPERFAMILY SSF51569 8 341 8.46E-96 T 26-04-2016 smi_0591 9b0beb385e2faae561a7ab90b5a7488d 343 PANTHER PTHR21225 10 341 3.6E-176 T 26-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 smi_0591 9b0beb385e2faae561a7ab90b5a7488d 343 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 14 341 9.1E-79 T 26-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 smi_0591 9b0beb385e2faae561a7ab90b5a7488d 343 Gene3D G3DSA:3.20.20.70 10 341 4.9E-107 T 26-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 smi_0281 b5a4188623bec5e05be023a6f939ad1d 184 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 2 183 40.141 T 26-04-2016 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 smi_0281 b5a4188623bec5e05be023a6f939ad1d 184 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 6 178 2.2E-64 T 26-04-2016 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 smi_0281 b5a4188623bec5e05be023a6f939ad1d 184 Pfam PF01227 GTP cyclohydrolase I 6 182 4.1E-72 T 26-04-2016 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 smi_0281 b5a4188623bec5e05be023a6f939ad1d 184 PANTHER PTHR11109 1 181 2.6E-92 T 26-04-2016 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 smi_0281 b5a4188623bec5e05be023a6f939ad1d 184 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 62 78 - T 26-04-2016 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 smi_0281 b5a4188623bec5e05be023a6f939ad1d 184 Gene3D G3DSA:3.30.1130.10 60 182 4.1E-51 T 26-04-2016 smi_0281 b5a4188623bec5e05be023a6f939ad1d 184 SUPERFAMILY SSF55620 2 182 1.11E-69 T 26-04-2016 smi_0281 b5a4188623bec5e05be023a6f939ad1d 184 Gene3D G3DSA:1.10.286.10 1 52 3.5E-24 T 26-04-2016 smi_0281 b5a4188623bec5e05be023a6f939ad1d 184 ProSitePatterns PS00860 GTP cyclohydrolase I signature 2. 110 120 - T 26-04-2016 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 smi_0045 6e788fc02abdb163469fedcfdee67d8c 165 Pfam PF13384 Homeodomain-like domain 22 69 5.4E-10 T 26-04-2016 smi_0045 6e788fc02abdb163469fedcfdee67d8c 165 Gene3D G3DSA:1.10.10.10 26 98 6.7E-4 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain smi_0045 6e788fc02abdb163469fedcfdee67d8c 165 SUPERFAMILY SSF46689 21 133 5.55E-9 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 smi_0045 6e788fc02abdb163469fedcfdee67d8c 165 Pfam PF13592 Winged helix-turn helix 100 158 3.4E-10 T 26-04-2016 IPR025959 Winged helix-turn helix domain smi_0297 16cb65e4f7eb368bce59f83ea1d01172 218 Gene3D G3DSA:3.20.20.70 1 217 2.4E-92 T 26-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 smi_0297 16cb65e4f7eb368bce59f83ea1d01172 218 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 5 214 1.7E-83 T 26-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 smi_0297 16cb65e4f7eb368bce59f83ea1d01172 218 PANTHER PTHR11749 2 218 9.3E-116 T 26-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 smi_0297 16cb65e4f7eb368bce59f83ea1d01172 218 SUPERFAMILY SSF51366 1 205 7.65E-70 T 26-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 smi_0297 16cb65e4f7eb368bce59f83ea1d01172 218 Pfam PF00834 Ribulose-phosphate 3 epimerase family 5 202 8.6E-77 T 26-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 smi_0297 16cb65e4f7eb368bce59f83ea1d01172 218 PIRSF PIRSF001461 1 218 5.0E-88 T 26-04-2016 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 smi_0297 16cb65e4f7eb368bce59f83ea1d01172 218 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 135 157 - T 26-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 smi_2042 6da0861b1736518f6893ae0f931f0b6f 257 SUPERFAMILY SSF55811 36 193 5.5E-28 T 26-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 smi_2042 6da0861b1736518f6893ae0f931f0b6f 257 ProSitePatterns PS00893 Nudix box signature. 77 98 - T 26-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 smi_2042 6da0861b1736518f6893ae0f931f0b6f 257 PANTHER PTHR22769:SF42 3 210 2.6E-21 T 26-04-2016 smi_2042 6da0861b1736518f6893ae0f931f0b6f 257 Pfam PF00293 NUDIX domain 52 132 5.7E-11 T 26-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 smi_2042 6da0861b1736518f6893ae0f931f0b6f 257 Gene3D G3DSA:1.10.10.10 191 257 2.9E-18 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain smi_2042 6da0861b1736518f6893ae0f931f0b6f 257 Gene3D G3DSA:1.10.287.1030 4 35 2.6E-19 T 26-04-2016 smi_2042 6da0861b1736518f6893ae0f931f0b6f 257 PANTHER PTHR22769 3 210 2.6E-21 T 26-04-2016 smi_2042 6da0861b1736518f6893ae0f931f0b6f 257 Gene3D G3DSA:3.90.79.10 36 183 2.7E-38 T 26-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 smi_1217 a5940d52f1a8f0d89ab84f66b4445a57 345 PANTHER PTHR11835:SF35 2 345 3.3E-193 T 26-04-2016 smi_1217 a5940d52f1a8f0d89ab84f66b4445a57 345 Gene3D G3DSA:3.40.718.10 1 345 2.5E-128 T 26-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 smi_1217 a5940d52f1a8f0d89ab84f66b4445a57 345 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 4 342 2.5E-140 T 26-04-2016 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396|UniPathway: UPA00048 smi_1217 a5940d52f1a8f0d89ab84f66b4445a57 345 SMART SM01329 4 341 3.4E-187 T 26-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 smi_1217 a5940d52f1a8f0d89ab84f66b4445a57 345 PANTHER PTHR11835 2 345 3.3E-193 T 26-04-2016 IPR001804 Isocitrate and isopropylmalate dehydrogenases family GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 smi_1217 a5940d52f1a8f0d89ab84f66b4445a57 345 SUPERFAMILY SSF53659 1 345 1.92E-117 T 26-04-2016 smi_1217 a5940d52f1a8f0d89ab84f66b4445a57 345 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 236 255 - T 26-04-2016 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 smi_1217 a5940d52f1a8f0d89ab84f66b4445a57 345 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 3 345 46.395 T 26-04-2016 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396|UniPathway: UPA00048 smi_1217 a5940d52f1a8f0d89ab84f66b4445a57 345 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 4 341 2.5E-130 T 26-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 smi_0028 a7ad9bcbd5eef2718ec9675d130b6078 397 SUPERFAMILY SSF52540 11 231 2.9E-48 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0028 a7ad9bcbd5eef2718ec9675d130b6078 397 SMART SM00382 31 184 1.5E-10 T 26-04-2016 IPR003593 AAA+ ATPase domain smi_0028 a7ad9bcbd5eef2718ec9675d130b6078 397 PRINTS PR01874 DNA repair protein radA signature 262 285 6.4E-77 T 26-04-2016 smi_0028 a7ad9bcbd5eef2718ec9675d130b6078 397 PRINTS PR01874 DNA repair protein radA signature 64 81 6.4E-77 T 26-04-2016 smi_0028 a7ad9bcbd5eef2718ec9675d130b6078 397 PRINTS PR01874 DNA repair protein radA signature 114 138 6.4E-77 T 26-04-2016 smi_0028 a7ad9bcbd5eef2718ec9675d130b6078 397 PRINTS PR01874 DNA repair protein radA signature 23 51 6.4E-77 T 26-04-2016 smi_0028 a7ad9bcbd5eef2718ec9675d130b6078 397 PRINTS PR01874 DNA repair protein radA signature 188 214 6.4E-77 T 26-04-2016 smi_0028 a7ad9bcbd5eef2718ec9675d130b6078 397 PRINTS PR01874 DNA repair protein radA signature 153 181 6.4E-77 T 26-04-2016 smi_0028 a7ad9bcbd5eef2718ec9675d130b6078 397 Pfam PF13541 Subunit ChlI of Mg-chelatase 305 369 3.5E-10 T 26-04-2016 smi_0028 a7ad9bcbd5eef2718ec9675d130b6078 397 PANTHER PTHR32472 1 396 7.8E-190 T 26-04-2016 smi_0028 a7ad9bcbd5eef2718ec9675d130b6078 397 SUPERFAMILY SSF54211 243 396 5.31E-40 T 26-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold smi_0028 a7ad9bcbd5eef2718ec9675d130b6078 397 SUPERFAMILY SSF54211 195 209 5.31E-40 T 26-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold smi_0028 a7ad9bcbd5eef2718ec9675d130b6078 397 Gene3D G3DSA:3.30.230.10 229 396 1.2E-34 T 26-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup smi_0028 a7ad9bcbd5eef2718ec9675d130b6078 397 Gene3D G3DSA:3.40.50.300 3 216 2.8E-50 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0028 a7ad9bcbd5eef2718ec9675d130b6078 397 Pfam PF13481 AAA domain 10 162 1.7E-14 T 26-04-2016 smi_0028 a7ad9bcbd5eef2718ec9675d130b6078 397 TIGRFAM TIGR00416 sms: DNA repair protein RadA 2 392 1.4E-173 T 26-04-2016 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 smi_0892 1d7277e2a5f0f6b00fb348909a8e98b9 350 PANTHER PTHR34296 4 350 6.5E-144 T 26-04-2016 smi_0892 1d7277e2a5f0f6b00fb348909a8e98b9 350 Pfam PF02608 Basic membrane protein 41 349 7.9E-70 T 26-04-2016 IPR003760 Basic membrane lipoprotein GO:0005886 smi_0892 1d7277e2a5f0f6b00fb348909a8e98b9 350 Gene3D G3DSA:3.40.50.2300 36 168 9.2E-48 T 26-04-2016 smi_0892 1d7277e2a5f0f6b00fb348909a8e98b9 350 Gene3D G3DSA:3.40.50.2300 169 242 6.4E-10 T 26-04-2016 smi_0892 1d7277e2a5f0f6b00fb348909a8e98b9 350 PANTHER PTHR34296:SF2 4 350 6.5E-144 T 26-04-2016 smi_0892 1d7277e2a5f0f6b00fb348909a8e98b9 350 SUPERFAMILY SSF53822 53 310 1.05E-17 T 26-04-2016 IPR028082 Periplasmic binding protein-like I smi_1485 fe6cbad9116f5156cc01d46301fc7beb 245 PANTHER PTHR26402:SF547 3 144 2.4E-45 T 26-04-2016 smi_1485 fe6cbad9116f5156cc01d46301fc7beb 245 Gene3D G3DSA:3.40.50.2300 2 132 1.8E-36 T 26-04-2016 smi_1485 fe6cbad9116f5156cc01d46301fc7beb 245 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 194 236 - T 26-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 smi_1485 fe6cbad9116f5156cc01d46301fc7beb 245 Pfam PF00072 Response regulator receiver domain 5 117 2.7E-29 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 smi_1485 fe6cbad9116f5156cc01d46301fc7beb 245 SUPERFAMILY SSF52172 3 138 1.39E-35 T 26-04-2016 IPR011006 CheY-like superfamily smi_1485 fe6cbad9116f5156cc01d46301fc7beb 245 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 224 240 1.2E-6 T 26-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 smi_1485 fe6cbad9116f5156cc01d46301fc7beb 245 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 209 224 1.2E-6 T 26-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 smi_1485 fe6cbad9116f5156cc01d46301fc7beb 245 Pfam PF12833 Helix-turn-helix domain 163 241 3.4E-19 T 26-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 smi_1485 fe6cbad9116f5156cc01d46301fc7beb 245 Gene3D G3DSA:1.10.10.60 195 242 3.0E-16 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 smi_1485 fe6cbad9116f5156cc01d46301fc7beb 245 SMART SM00342 157 240 1.3E-25 T 26-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 smi_1485 fe6cbad9116f5156cc01d46301fc7beb 245 Gene3D G3DSA:1.10.10.60 148 194 2.6E-9 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 smi_1485 fe6cbad9116f5156cc01d46301fc7beb 245 SUPERFAMILY SSF46689 194 242 3.9E-13 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 smi_1485 fe6cbad9116f5156cc01d46301fc7beb 245 PANTHER PTHR26402 3 144 2.4E-45 T 26-04-2016 smi_1485 fe6cbad9116f5156cc01d46301fc7beb 245 SMART SM00448 3 117 1.8E-32 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 smi_1784 6d0fe998913c83da7345aaddd6c8d323 456 SUPERFAMILY SSF103473 6 197 1.7E-61 T 26-04-2016 IPR020846 Major facilitator superfamily domain smi_1784 6d0fe998913c83da7345aaddd6c8d323 456 SUPERFAMILY SSF103473 247 449 1.7E-61 T 26-04-2016 IPR020846 Major facilitator superfamily domain smi_1784 6d0fe998913c83da7345aaddd6c8d323 456 Gene3D G3DSA:1.20.1250.20 11 190 3.7E-28 T 26-04-2016 smi_1784 6d0fe998913c83da7345aaddd6c8d323 456 Gene3D G3DSA:1.20.1250.20 262 447 7.2E-16 T 26-04-2016 smi_1784 6d0fe998913c83da7345aaddd6c8d323 456 PANTHER PTHR23501 13 452 4.0E-96 T 26-04-2016 smi_1784 6d0fe998913c83da7345aaddd6c8d323 456 PANTHER PTHR23501:SF54 13 452 4.0E-96 T 26-04-2016 smi_1784 6d0fe998913c83da7345aaddd6c8d323 456 Pfam PF07690 Major Facilitator Superfamily 16 411 5.4E-41 T 26-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 smi_1357 4b393cefcd819b397abebeccc1e27b3a 649 PANTHER PTHR30505 43 380 2.6E-276 T 26-04-2016 smi_1357 4b393cefcd819b397abebeccc1e27b3a 649 PANTHER PTHR30505 400 625 2.6E-276 T 26-04-2016 smi_1357 4b393cefcd819b397abebeccc1e27b3a 649 Pfam PF02378 Phosphotransferase system, EIIC 296 591 3.1E-22 T 26-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 smi_1357 4b393cefcd819b397abebeccc1e27b3a 649 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 280 645 5.5E-116 T 26-04-2016 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 smi_1357 4b393cefcd819b397abebeccc1e27b3a 649 PANTHER PTHR30505:SF0 43 380 2.6E-276 T 26-04-2016 smi_1357 4b393cefcd819b397abebeccc1e27b3a 649 PANTHER PTHR30505:SF0 400 625 2.6E-276 T 26-04-2016 smi_1357 4b393cefcd819b397abebeccc1e27b3a 649 SUPERFAMILY SSF52794 168 268 2.44E-35 T 26-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 smi_1357 4b393cefcd819b397abebeccc1e27b3a 649 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 169 250 1.7E-29 T 26-04-2016 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 smi_1357 4b393cefcd819b397abebeccc1e27b3a 649 Gene3D G3DSA:3.40.930.10 1 153 1.5E-50 T 26-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- smi_1357 4b393cefcd819b397abebeccc1e27b3a 649 TIGRFAM TIGR00848 fruA: PTS system, fructose subfamily, IIA component 6 133 1.1E-43 T 26-04-2016 IPR004715 Phosphotransferase system, IIA component fructose subfamily GO:0008982|GO:0009401|GO:0016021 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- smi_1357 4b393cefcd819b397abebeccc1e27b3a 649 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 170 259 1.5E-17 T 26-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 smi_1357 4b393cefcd819b397abebeccc1e27b3a 649 SUPERFAMILY SSF55804 1 148 3.14E-41 T 26-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 smi_1357 4b393cefcd819b397abebeccc1e27b3a 649 Gene3D G3DSA:3.40.50.2300 163 269 1.0E-42 T 26-04-2016 smi_1357 4b393cefcd819b397abebeccc1e27b3a 649 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 6 148 1.7E-34 T 26-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- smi_1240 4870f4f897a977a7aa07a629c453e0d5 519 Gene3D G3DSA:3.40.50.300 13 264 5.9E-37 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1240 4870f4f897a977a7aa07a629c453e0d5 519 PANTHER PTHR19211 279 504 1.5E-67 T 26-04-2016 smi_1240 4870f4f897a977a7aa07a629c453e0d5 519 PANTHER PTHR19211 12 252 1.5E-67 T 26-04-2016 smi_1240 4870f4f897a977a7aa07a629c453e0d5 519 Gene3D G3DSA:3.40.50.300 323 508 9.7E-29 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1240 4870f4f897a977a7aa07a629c453e0d5 519 SUPERFAMILY SSF52540 304 509 1.02E-30 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1240 4870f4f897a977a7aa07a629c453e0d5 519 SUPERFAMILY SSF52540 6 206 1.05E-34 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1240 4870f4f897a977a7aa07a629c453e0d5 519 SMART SM00382 350 513 7.6E-6 T 26-04-2016 IPR003593 AAA+ ATPase domain smi_1240 4870f4f897a977a7aa07a629c453e0d5 519 SMART SM00382 39 209 5.4E-8 T 26-04-2016 IPR003593 AAA+ ATPase domain smi_1240 4870f4f897a977a7aa07a629c453e0d5 519 Pfam PF00005 ABC transporter 343 464 4.4E-16 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 smi_1240 4870f4f897a977a7aa07a629c453e0d5 519 Pfam PF00005 ABC transporter 31 164 2.0E-16 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 smi_1240 4870f4f897a977a7aa07a629c453e0d5 519 PANTHER PTHR19211:SF45 279 504 1.5E-67 T 26-04-2016 smi_1240 4870f4f897a977a7aa07a629c453e0d5 519 PANTHER PTHR19211:SF45 12 252 1.5E-67 T 26-04-2016 smi_1623 f86ecdd081da9add07601d87853fda66 246 PANTHER PTHR13832 1 246 9.4E-63 T 26-04-2016 IPR015655 Protein phosphatase 2C family GO:0004722|GO:0006470 KEGG: 04660+3.1.3.16 smi_1623 f86ecdd081da9add07601d87853fda66 246 SUPERFAMILY SSF81606 2 240 1.05E-57 T 26-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 smi_1623 f86ecdd081da9add07601d87853fda66 246 Gene3D G3DSA:3.60.40.10 2 239 2.4E-60 T 26-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 smi_1623 f86ecdd081da9add07601d87853fda66 246 SMART SM00332 1 238 5.8E-13 T 26-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 smi_1623 f86ecdd081da9add07601d87853fda66 246 SMART SM00331 7 240 1.5E-39 T 26-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 smi_1623 f86ecdd081da9add07601d87853fda66 246 Pfam PF13672 Protein phosphatase 2C 12 221 1.8E-16 T 26-04-2016 smi_1623 f86ecdd081da9add07601d87853fda66 246 PANTHER PTHR13832:SF278 1 246 9.4E-63 T 26-04-2016 smi_1013 1aabdd7fdbef663b7e47157ac9a35782 212 TIGRFAM TIGR00235 udk: uridine kinase 3 206 1.2E-87 T 26-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 smi_1013 1aabdd7fdbef663b7e47157ac9a35782 212 PRINTS PR00988 Uridine kinase signature 80 95 8.2E-39 T 26-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 smi_1013 1aabdd7fdbef663b7e47157ac9a35782 212 PRINTS PR00988 Uridine kinase signature 35 46 8.2E-39 T 26-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 smi_1013 1aabdd7fdbef663b7e47157ac9a35782 212 PRINTS PR00988 Uridine kinase signature 150 161 8.2E-39 T 26-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 smi_1013 1aabdd7fdbef663b7e47157ac9a35782 212 PRINTS PR00988 Uridine kinase signature 136 146 8.2E-39 T 26-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 smi_1013 1aabdd7fdbef663b7e47157ac9a35782 212 PRINTS PR00988 Uridine kinase signature 172 185 8.2E-39 T 26-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 smi_1013 1aabdd7fdbef663b7e47157ac9a35782 212 PRINTS PR00988 Uridine kinase signature 5 22 8.2E-39 T 26-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 smi_1013 1aabdd7fdbef663b7e47157ac9a35782 212 Hamap MF_00551 Uridine kinase [udk]. 2 206 42.934 T 26-04-2016 IPR026008 Uridine kinase GO:0004849|GO:0005524|GO:0016773 KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 smi_1013 1aabdd7fdbef663b7e47157ac9a35782 212 Gene3D G3DSA:3.40.50.300 4 206 3.2E-70 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1013 1aabdd7fdbef663b7e47157ac9a35782 212 SUPERFAMILY SSF52540 3 197 5.47E-49 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1013 1aabdd7fdbef663b7e47157ac9a35782 212 PANTHER PTHR10285 2 207 4.2E-93 T 26-04-2016 smi_1013 1aabdd7fdbef663b7e47157ac9a35782 212 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 7 192 1.2E-48 T 26-04-2016 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0008152|GO:0016301 smi_0792 ce0848b8ae9afab47be3070ef7f4177d 269 PANTHER PTHR30514 4 247 8.2E-43 T 26-04-2016 smi_0792 ce0848b8ae9afab47be3070ef7f4177d 269 SUPERFAMILY SSF53697 90 252 5.93E-26 T 26-04-2016 smi_0792 ce0848b8ae9afab47be3070ef7f4177d 269 Gene3D G3DSA:3.40.50.10490 68 253 1.6E-26 T 26-04-2016 smi_0792 ce0848b8ae9afab47be3070ef7f4177d 269 PANTHER PTHR30514:SF1 4 247 8.2E-43 T 26-04-2016 smi_0792 ce0848b8ae9afab47be3070ef7f4177d 269 Pfam PF01380 SIS domain 120 210 7.1E-10 T 26-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 smi_0792 ce0848b8ae9afab47be3070ef7f4177d 269 Gene3D G3DSA:1.10.10.10 5 67 3.6E-14 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain smi_0792 ce0848b8ae9afab47be3070ef7f4177d 269 SUPERFAMILY SSF46689 5 79 1.97E-12 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 smi_0792 ce0848b8ae9afab47be3070ef7f4177d 269 Pfam PF01418 Helix-turn-helix domain, rpiR family 7 75 1.7E-11 T 26-04-2016 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 smi_1657 18d54a8ed5d87c4fdb21e142aa183cc7 290 Pfam PF00535 Glycosyl transferase family 2 6 175 1.2E-39 T 26-04-2016 IPR001173 Glycosyltransferase 2-like smi_1657 18d54a8ed5d87c4fdb21e142aa183cc7 290 PANTHER PTHR22916:SF24 2 215 2.7E-51 T 26-04-2016 smi_1657 18d54a8ed5d87c4fdb21e142aa183cc7 290 SUPERFAMILY SSF53448 4 221 1.45E-55 T 26-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases smi_1657 18d54a8ed5d87c4fdb21e142aa183cc7 290 Gene3D G3DSA:3.90.550.10 3 206 3.1E-57 T 26-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases smi_1657 18d54a8ed5d87c4fdb21e142aa183cc7 290 PANTHER PTHR22916 2 215 2.7E-51 T 26-04-2016 smi_0942 b5ab576fb0477656f19d3fef4171a606 351 SUPERFAMILY SSF53335 4 346 7.59E-93 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase smi_0942 b5ab576fb0477656f19d3fef4171a606 351 ProSitePatterns PS00094 C-5 cytosine-specific DNA methylases active site. 74 86 - T 26-04-2016 IPR018117 DNA methylase, C-5 cytosine-specific, active site KEGG: 00270+2.1.1.37 smi_0942 b5ab576fb0477656f19d3fef4171a606 351 TIGRFAM TIGR00675 dcm: DNA (cytosine-5-)-methyltransferase 6 342 9.2E-69 T 26-04-2016 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 smi_0942 b5ab576fb0477656f19d3fef4171a606 351 PANTHER PTHR10629:SF32 2 351 6.2E-80 T 26-04-2016 smi_0942 b5ab576fb0477656f19d3fef4171a606 351 Gene3D G3DSA:3.40.50.150 4 165 3.7E-55 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase smi_0942 b5ab576fb0477656f19d3fef4171a606 351 ProSitePatterns PS00095 C-5 cytosine-specific DNA methylases C-terminal signature. 324 342 - T 26-04-2016 IPR031303 DNA methylase, C-5 cytosine-specific, conserved site KEGG: 00270+2.1.1.37 smi_0942 b5ab576fb0477656f19d3fef4171a606 351 Gene3D G3DSA:3.90.120.10 262 332 9.3E-33 T 26-04-2016 smi_0942 b5ab576fb0477656f19d3fef4171a606 351 Gene3D G3DSA:3.90.120.10 166 207 9.3E-33 T 26-04-2016 smi_0942 b5ab576fb0477656f19d3fef4171a606 351 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 5 21 2.0E-17 T 26-04-2016 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 smi_0942 b5ab576fb0477656f19d3fef4171a606 351 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 112 126 2.0E-17 T 26-04-2016 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 smi_0942 b5ab576fb0477656f19d3fef4171a606 351 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 158 171 2.0E-17 T 26-04-2016 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 smi_0942 b5ab576fb0477656f19d3fef4171a606 351 Pfam PF00145 C-5 cytosine-specific DNA methylase 4 343 5.4E-77 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase smi_0942 b5ab576fb0477656f19d3fef4171a606 351 PANTHER PTHR10629 2 351 6.2E-80 T 26-04-2016 smi_1084 4de55ab04e05aa1745121be747a8cfa7 301 PANTHER PTHR34184 4 301 3.1E-126 T 26-04-2016 smi_1084 4de55ab04e05aa1745121be747a8cfa7 301 PANTHER PTHR34184:SF1 4 301 3.1E-126 T 26-04-2016 smi_1084 4de55ab04e05aa1745121be747a8cfa7 301 PRINTS PR01988 Putative bacilysin exporter bacE signature 269 292 7.8E-5 T 26-04-2016 IPR022324 Bacilysin exporter BacE, putative GO:0016020|GO:0042891 smi_1084 4de55ab04e05aa1745121be747a8cfa7 301 PRINTS PR01988 Putative bacilysin exporter bacE signature 208 231 7.8E-5 T 26-04-2016 IPR022324 Bacilysin exporter BacE, putative GO:0016020|GO:0042891 smi_1084 4de55ab04e05aa1745121be747a8cfa7 301 PRINTS PR01988 Putative bacilysin exporter bacE signature 88 105 7.8E-5 T 26-04-2016 IPR022324 Bacilysin exporter BacE, putative GO:0016020|GO:0042891 smi_1084 4de55ab04e05aa1745121be747a8cfa7 301 PRINTS PR01988 Putative bacilysin exporter bacE signature 19 37 7.8E-5 T 26-04-2016 IPR022324 Bacilysin exporter BacE, putative GO:0016020|GO:0042891 smi_1084 4de55ab04e05aa1745121be747a8cfa7 301 Pfam PF03773 Predicted permease 16 298 6.6E-65 T 26-04-2016 IPR005524 Predicted permease DUF318 smi_0257 38f5bd0d9b9b5550a4c580ed52056ae0 245 PANTHER PTHR30294 1 244 3.9E-102 T 26-04-2016 smi_0257 38f5bd0d9b9b5550a4c580ed52056ae0 245 PIRSF PIRSF006648 3 243 7.0E-19 T 26-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 smi_0257 38f5bd0d9b9b5550a4c580ed52056ae0 245 PANTHER PTHR30294:SF6 1 244 3.9E-102 T 26-04-2016 smi_0257 38f5bd0d9b9b5550a4c580ed52056ae0 245 Pfam PF01061 ABC-2 type transporter 4 207 3.3E-14 T 26-04-2016 IPR013525 ABC-2 type transporter GO:0016020 smi_1549 35756d8e212db9916f0e07e3ff19e80e 72 SUPERFAMILY SSF54611 1 64 3.27E-22 T 26-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 smi_1549 35756d8e212db9916f0e07e3ff19e80e 72 Gene3D G3DSA:3.10.420.10 1 64 9.8E-22 T 26-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 smi_1549 35756d8e212db9916f0e07e3ff19e80e 72 Pfam PF06619 Protein of unknown function (DUF1149) 1 64 1.1E-15 T 26-04-2016 IPR009530 Protein of unknown function DUF1149 smi_1676 807358865eb23dbb7dda834636a6fa15 455 Pfam PF02785 Biotin carboxylase C-terminal domain 337 444 2.2E-38 T 26-04-2016 IPR005482 Biotin carboxylase, C-terminal smi_1676 807358865eb23dbb7dda834636a6fa15 455 SUPERFAMILY SSF56059 83 353 4.42E-70 T 26-04-2016 smi_1676 807358865eb23dbb7dda834636a6fa15 455 Gene3D G3DSA:3.40.50.20 1 129 1.6E-50 T 26-04-2016 IPR016185 Pre-ATP-grasp domain smi_1676 807358865eb23dbb7dda834636a6fa15 455 PANTHER PTHR18866 1 445 3.7E-289 T 26-04-2016 smi_1676 807358865eb23dbb7dda834636a6fa15 455 SUPERFAMILY SSF51246 332 445 4.19E-41 T 26-04-2016 IPR011054 Rudiment single hybrid motif smi_1676 807358865eb23dbb7dda834636a6fa15 455 Gene3D G3DSA:3.30.470.20 206 447 1.0E-95 T 26-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 smi_1676 807358865eb23dbb7dda834636a6fa15 455 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 153 167 - T 26-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 smi_1676 807358865eb23dbb7dda834636a6fa15 455 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 445 1.0E-204 T 26-04-2016 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 smi_1676 807358865eb23dbb7dda834636a6fa15 455 Gene3D G3DSA:3.30.1490.20 130 201 2.7E-28 T 26-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 smi_1676 807358865eb23dbb7dda834636a6fa15 455 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 6.7E-45 T 26-04-2016 IPR005481 Biotin carboxylase-like, N-terminal domain smi_1676 807358865eb23dbb7dda834636a6fa15 455 SUPERFAMILY SSF52440 1 113 2.09E-48 T 26-04-2016 IPR016185 Pre-ATP-grasp domain smi_1676 807358865eb23dbb7dda834636a6fa15 455 SMART SM00878 337 444 2.3E-58 T 26-04-2016 IPR005482 Biotin carboxylase, C-terminal smi_1676 807358865eb23dbb7dda834636a6fa15 455 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 287 294 - T 26-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 smi_1676 807358865eb23dbb7dda834636a6fa15 455 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 323 2.1E-73 T 26-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 smi_1616 54a0dbf585d3d9c451d8ead14ad79320 484 Gene3D G3DSA:2.60.120.560 335 477 3.8E-31 T 26-04-2016 IPR013189 Glycosyl hydrolase family 32, C-terminal smi_1616 54a0dbf585d3d9c451d8ead14ad79320 484 SMART SM00640 37 446 5.7E-113 T 26-04-2016 IPR001362 Glycoside hydrolase, family 32 GO:0004553|GO:0005975 smi_1616 54a0dbf585d3d9c451d8ead14ad79320 484 Pfam PF00251 Glycosyl hydrolases family 32 N-terminal domain 37 340 7.0E-85 T 26-04-2016 IPR013148 Glycosyl hydrolase family 32, N-terminal smi_1616 54a0dbf585d3d9c451d8ead14ad79320 484 SUPERFAMILY SSF75005 27 341 4.43E-82 T 26-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain smi_1616 54a0dbf585d3d9c451d8ead14ad79320 484 TIGRFAM TIGR01322 scrB_fam: sucrose-6-phosphate hydrolase 21 456 7.7E-161 T 26-04-2016 IPR006232 Sucrose-6-phosphate hydrolase GO:0004564|GO:0005737|GO:0005975 KEGG: 00052+3.2.1.26|KEGG: 00500+3.2.1.26|UniPathway: UPA00238 smi_1616 54a0dbf585d3d9c451d8ead14ad79320 484 PANTHER PTHR30175:SF8 1 456 9.9E-238 T 26-04-2016 smi_1616 54a0dbf585d3d9c451d8ead14ad79320 484 Pfam PF08244 Glycosyl hydrolases family 32 C terminal 376 446 2.8E-8 T 26-04-2016 IPR013189 Glycosyl hydrolase family 32, C-terminal smi_1616 54a0dbf585d3d9c451d8ead14ad79320 484 Gene3D G3DSA:2.115.10.20 42 334 3.6E-10 T 26-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain smi_1616 54a0dbf585d3d9c451d8ead14ad79320 484 SUPERFAMILY SSF49899 340 479 2.85E-27 T 26-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain smi_1616 54a0dbf585d3d9c451d8ead14ad79320 484 ProSitePatterns PS00609 Glycosyl hydrolases family 32 active site. 37 50 - T 26-04-2016 IPR018053 Glycoside hydrolase, family 32, active site GO:0004553|GO:0005975 KEGG: 00052+3.2.1.26|KEGG: 00500+3.2.1.26 smi_1616 54a0dbf585d3d9c451d8ead14ad79320 484 PANTHER PTHR30175 1 456 9.9E-238 T 26-04-2016 smi_0699 f48edd51bde21e8813a2117fb5c0439a 315 Gene3D G3DSA:3.40.50.1820 46 314 2.3E-29 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold smi_0699 f48edd51bde21e8813a2117fb5c0439a 315 SUPERFAMILY SSF53474 47 314 5.02E-26 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold smi_0699 f48edd51bde21e8813a2117fb5c0439a 315 Pfam PF12697 Alpha/beta hydrolase family 68 305 2.0E-6 T 26-04-2016 IPR000073 Alpha/beta hydrolase fold-1 smi_0699 f48edd51bde21e8813a2117fb5c0439a 315 PANTHER PTHR10992 51 314 4.7E-15 T 26-04-2016 smi_0676 28aec7b9bfab56eedc746821d0c8ab64 249 Gene3D G3DSA:3.30.70.660 108 248 2.3E-46 T 26-04-2016 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 smi_0676 28aec7b9bfab56eedc746821d0c8ab64 249 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 5 242 4.1E-64 T 26-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 smi_0676 28aec7b9bfab56eedc746821d0c8ab64 249 Pfam PF01416 tRNA pseudouridine synthase 6 104 2.5E-12 T 26-04-2016 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 smi_0676 28aec7b9bfab56eedc746821d0c8ab64 249 Pfam PF01416 tRNA pseudouridine synthase 144 248 4.5E-28 T 26-04-2016 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 smi_0676 28aec7b9bfab56eedc746821d0c8ab64 249 PIRSF PIRSF001430 1 249 5.9E-80 T 26-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 smi_0676 28aec7b9bfab56eedc746821d0c8ab64 249 PANTHER PTHR11142:SF0 1 249 3.0E-89 T 26-04-2016 smi_0676 28aec7b9bfab56eedc746821d0c8ab64 249 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 2 247 35.376 T 26-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 smi_0676 28aec7b9bfab56eedc746821d0c8ab64 249 PANTHER PTHR11142 1 249 3.0E-89 T 26-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 smi_0676 28aec7b9bfab56eedc746821d0c8ab64 249 SUPERFAMILY SSF55120 1 248 3.6E-82 T 26-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 smi_0676 28aec7b9bfab56eedc746821d0c8ab64 249 Gene3D G3DSA:3.30.70.580 1 105 2.8E-35 T 26-04-2016 IPR020094 Pseudouridine synthase I, TruA, N-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 smi_0144 b6e5f6c3d880bc955a7482e584739508 376 PIRSF PIRSF005962 2 376 6.0E-103 T 26-04-2016 IPR017439 Amidohydrolase GO:0016787 smi_0144 b6e5f6c3d880bc955a7482e584739508 376 Hamap MF_01692 N-acetyldiaminopimelate deacetylase. 1 373 62.565 T 26-04-2016 IPR023905 Acetyldiaminopimelate deacetylase GO:0009089|GO:0050118 KEGG: 00300+3.5.1.47|MetaCyc: PWY-2941|UniPathway: UPA00034 smi_0144 b6e5f6c3d880bc955a7482e584739508 376 Gene3D G3DSA:3.30.70.360 173 290 1.4E-39 T 26-04-2016 IPR011650 Peptidase M20, dimerisation domain smi_0144 b6e5f6c3d880bc955a7482e584739508 376 PANTHER PTHR11014 3 376 3.3E-235 T 26-04-2016 smi_0144 b6e5f6c3d880bc955a7482e584739508 376 PANTHER PTHR11014:SF98 3 376 3.3E-235 T 26-04-2016 smi_0144 b6e5f6c3d880bc955a7482e584739508 376 SUPERFAMILY SSF53187 3 189 4.3E-67 T 26-04-2016 smi_0144 b6e5f6c3d880bc955a7482e584739508 376 SUPERFAMILY SSF53187 291 370 4.3E-67 T 26-04-2016 smi_0144 b6e5f6c3d880bc955a7482e584739508 376 Pfam PF07687 Peptidase dimerisation domain 174 272 7.7E-9 T 26-04-2016 IPR011650 Peptidase M20, dimerisation domain smi_0144 b6e5f6c3d880bc955a7482e584739508 376 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 4 362 1.9E-90 T 26-04-2016 IPR017439 Amidohydrolase GO:0016787 smi_0144 b6e5f6c3d880bc955a7482e584739508 376 SUPERFAMILY SSF55031 173 290 3.66E-29 T 26-04-2016 IPR011650 Peptidase M20, dimerisation domain smi_0144 b6e5f6c3d880bc955a7482e584739508 376 Gene3D G3DSA:3.40.630.10 3 170 3.3E-73 T 26-04-2016 smi_0144 b6e5f6c3d880bc955a7482e584739508 376 Gene3D G3DSA:3.40.630.10 291 369 3.3E-73 T 26-04-2016 smi_0144 b6e5f6c3d880bc955a7482e584739508 376 Pfam PF01546 Peptidase family M20/M25/M40 67 371 8.6E-25 T 26-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 smi_0988 fa0427f1bd047ce6642fde1da56b1b9a 331 SUPERFAMILY SSF53822 38 261 2.9E-17 T 26-04-2016 IPR028082 Periplasmic binding protein-like I smi_0988 fa0427f1bd047ce6642fde1da56b1b9a 331 Gene3D G3DSA:3.40.50.2300 165 296 9.3E-54 T 26-04-2016 smi_0988 fa0427f1bd047ce6642fde1da56b1b9a 331 Gene3D G3DSA:3.40.50.2300 36 164 1.9E-57 T 26-04-2016 smi_0988 fa0427f1bd047ce6642fde1da56b1b9a 331 Pfam PF04392 ABC transporter substrate binding protein 39 329 7.7E-124 T 26-04-2016 IPR007487 ABC transporter, substrate-binding protein smi_0988 fa0427f1bd047ce6642fde1da56b1b9a 331 PANTHER PTHR35271 5 331 7.2E-64 T 26-04-2016 smi_0725 9a6c87689b3b377105d5d9d1f80edc51 352 Gene3D G3DSA:2.10.270.10 204 291 2.2E-4 T 26-04-2016 smi_0725 9a6c87689b3b377105d5d9d1f80edc51 352 Gene3D G3DSA:2.10.270.10 292 351 1.3E-6 T 26-04-2016 smi_0725 9a6c87689b3b377105d5d9d1f80edc51 352 PANTHER PTHR33308 215 333 2.3E-27 T 26-04-2016 smi_0725 9a6c87689b3b377105d5d9d1f80edc51 352 PANTHER PTHR33308:SF3 215 333 2.3E-27 T 26-04-2016 smi_0725 9a6c87689b3b377105d5d9d1f80edc51 352 SUPERFAMILY SSF69360 202 351 1.33E-14 T 26-04-2016 smi_1310 67b02ac61eaf166b3f486c346b62594b 292 PRINTS PR00126 ATP synthase gamma subunit signature 269 290 1.2E-35 T 26-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 smi_1310 67b02ac61eaf166b3f486c346b62594b 292 PRINTS PR00126 ATP synthase gamma subunit signature 169 186 1.2E-35 T 26-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 smi_1310 67b02ac61eaf166b3f486c346b62594b 292 PRINTS PR00126 ATP synthase gamma subunit signature 238 257 1.2E-35 T 26-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 smi_1310 67b02ac61eaf166b3f486c346b62594b 292 PRINTS PR00126 ATP synthase gamma subunit signature 76 95 1.2E-35 T 26-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 smi_1310 67b02ac61eaf166b3f486c346b62594b 292 PANTHER PTHR11693 1 292 3.4E-105 T 26-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 smi_1310 67b02ac61eaf166b3f486c346b62594b 292 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 4 291 3.3E-100 T 26-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 smi_1310 67b02ac61eaf166b3f486c346b62594b 292 Hamap MF_00815 ATP synthase gamma chain [atpG]. 2 291 32.428 T 26-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 smi_1310 67b02ac61eaf166b3f486c346b62594b 292 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 277 290 - T 26-04-2016 IPR023632 ATPase, F1 complex, gamma subunit conserved site smi_1310 67b02ac61eaf166b3f486c346b62594b 292 SUPERFAMILY SSF52943 4 291 3.53E-87 T 26-04-2016 IPR023633 ATPase, F1 complex, gamma subunit domain smi_1310 67b02ac61eaf166b3f486c346b62594b 292 Gene3D G3DSA:1.10.287.80 240 286 6.5E-26 T 26-04-2016 smi_1310 67b02ac61eaf166b3f486c346b62594b 292 Pfam PF00231 ATP synthase 4 291 7.6E-86 T 26-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 smi_1310 67b02ac61eaf166b3f486c346b62594b 292 Gene3D G3DSA:1.10.287.80 20 61 1.5E-24 T 26-04-2016 smi_1310 67b02ac61eaf166b3f486c346b62594b 292 Gene3D G3DSA:1.10.287.80 206 239 1.5E-24 T 26-04-2016 smi_1310 67b02ac61eaf166b3f486c346b62594b 292 Gene3D G3DSA:3.40.1380.10 68 194 1.0E-40 T 26-04-2016 smi_0056 7c730efb5df2c500c29b772dde08ebb0 291 Pfam PF01381 Helix-turn-helix 10 62 2.4E-6 T 26-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 smi_0056 7c730efb5df2c500c29b772dde08ebb0 291 SMART SM00530 8 62 7.2E-4 T 26-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 smi_0056 7c730efb5df2c500c29b772dde08ebb0 291 SUPERFAMILY SSF47413 4 65 8.45E-12 T 26-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 smi_0056 7c730efb5df2c500c29b772dde08ebb0 291 PANTHER PTHR37038 3 289 2.6E-66 T 26-04-2016 smi_0056 7c730efb5df2c500c29b772dde08ebb0 291 Gene3D G3DSA:1.10.260.40 5 74 1.8E-7 T 26-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 smi_0056 7c730efb5df2c500c29b772dde08ebb0 291 PANTHER PTHR37038:SF2 3 289 2.6E-66 T 26-04-2016 smi_0935 4a452ec41e17a3234819ad2c065adc6c 376 Pfam PF01472 PUA domain 283 348 5.0E-16 T 26-04-2016 IPR002478 PUA domain GO:0003723 smi_0935 4a452ec41e17a3234819ad2c065adc6c 376 TIGRFAM TIGR01027 proB: glutamate 5-kinase 11 368 3.3E-134 T 26-04-2016 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 smi_0935 4a452ec41e17a3234819ad2c065adc6c 376 Gene3D G3DSA:2.30.130.10 280 363 1.9E-22 T 26-04-2016 IPR015947 PUA-like domain smi_0935 4a452ec41e17a3234819ad2c065adc6c 376 PANTHER PTHR11063:SF6 2 367 2.0E-105 T 26-04-2016 smi_0935 4a452ec41e17a3234819ad2c065adc6c 376 PANTHER PTHR11063 2 367 2.0E-105 T 26-04-2016 smi_0935 4a452ec41e17a3234819ad2c065adc6c 376 Gene3D G3DSA:3.40.1160.10 10 262 2.1E-61 T 26-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 smi_0935 4a452ec41e17a3234819ad2c065adc6c 376 PRINTS PR00474 Glutamate 5-kinase family signature 82 110 8.4E-49 T 26-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 smi_0935 4a452ec41e17a3234819ad2c065adc6c 376 PRINTS PR00474 Glutamate 5-kinase family signature 122 143 8.4E-49 T 26-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 smi_0935 4a452ec41e17a3234819ad2c065adc6c 376 PRINTS PR00474 Glutamate 5-kinase family signature 154 181 8.4E-49 T 26-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 smi_0935 4a452ec41e17a3234819ad2c065adc6c 376 PRINTS PR00474 Glutamate 5-kinase family signature 215 235 8.4E-49 T 26-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 smi_0935 4a452ec41e17a3234819ad2c065adc6c 376 PRINTS PR00474 Glutamate 5-kinase family signature 48 62 8.4E-49 T 26-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 smi_0935 4a452ec41e17a3234819ad2c065adc6c 376 PIRSF PIRSF000729 6 375 2.2E-136 T 26-04-2016 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 smi_0935 4a452ec41e17a3234819ad2c065adc6c 376 Hamap MF_00456 Glutamate 5-kinase [proB]. 11 264 35.871 T 26-04-2016 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 smi_0935 4a452ec41e17a3234819ad2c065adc6c 376 SMART SM00359 283 364 2.0E-8 T 26-04-2016 IPR002478 PUA domain GO:0003723 smi_0935 4a452ec41e17a3234819ad2c065adc6c 376 ProSitePatterns PS00902 Glutamate 5-kinase signature. 213 230 - T 26-04-2016 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 smi_0935 4a452ec41e17a3234819ad2c065adc6c 376 SUPERFAMILY SSF53633 11 262 1.96E-67 T 26-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 smi_0935 4a452ec41e17a3234819ad2c065adc6c 376 Pfam PF00696 Amino acid kinase family 11 241 2.0E-41 T 26-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 smi_0935 4a452ec41e17a3234819ad2c065adc6c 376 SUPERFAMILY SSF88697 283 363 6.63E-14 T 26-04-2016 IPR015947 PUA-like domain smi_1525 22b57c430170a72078e1aacd6093326e 447 Pfam PF01336 OB-fold nucleic acid binding domain 18 105 8.7E-14 T 26-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 smi_1525 22b57c430170a72078e1aacd6093326e 447 PANTHER PTHR22594 3 447 2.2E-192 T 26-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 smi_1525 22b57c430170a72078e1aacd6093326e 447 Hamap MF_00534 Asparagine--tRNA ligase [asnS]. 3 447 40.205 T 26-04-2016 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22|Reactome: REACT_71 smi_1525 22b57c430170a72078e1aacd6093326e 447 Gene3D G3DSA:2.40.50.140 9 111 1.3E-26 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold smi_1525 22b57c430170a72078e1aacd6093326e 447 PANTHER PTHR22594:SF16 3 447 2.2E-192 T 26-04-2016 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22|Reactome: REACT_71 smi_1525 22b57c430170a72078e1aacd6093326e 447 SUPERFAMILY SSF55681 120 441 9.12E-90 T 26-04-2016 smi_1525 22b57c430170a72078e1aacd6093326e 447 PRINTS PR01042 Aspartyl-tRNA synthetase signature 206 219 9.4E-15 T 26-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 smi_1525 22b57c430170a72078e1aacd6093326e 447 PRINTS PR01042 Aspartyl-tRNA synthetase signature 190 202 9.4E-15 T 26-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 smi_1525 22b57c430170a72078e1aacd6093326e 447 PRINTS PR01042 Aspartyl-tRNA synthetase signature 362 378 9.4E-15 T 26-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 smi_1525 22b57c430170a72078e1aacd6093326e 447 PRINTS PR01042 Aspartyl-tRNA synthetase signature 402 416 9.4E-15 T 26-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 smi_1525 22b57c430170a72078e1aacd6093326e 447 TIGRFAM TIGR00457 asnS: asparagine--tRNA ligase 7 446 6.2E-142 T 26-04-2016 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22|Reactome: REACT_71 smi_1525 22b57c430170a72078e1aacd6093326e 447 Gene3D G3DSA:3.30.930.10 112 446 8.2E-108 T 26-04-2016 smi_1525 22b57c430170a72078e1aacd6093326e 447 Pfam PF00152 tRNA synthetases class II (D, K and N) 121 441 9.3E-81 T 26-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 smi_1525 22b57c430170a72078e1aacd6093326e 447 SUPERFAMILY SSF50249 11 112 3.43E-20 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold smi_1683 7412c046c4a6d2c3477dcaaf6814585b 74 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 39 72 6.0E-11 T 26-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 smi_1683 7412c046c4a6d2c3477dcaaf6814585b 74 Pfam PF00550 Phosphopantetheine attachment site 5 69 3.9E-14 T 26-04-2016 IPR009081 Phosphopantetheine binding ACP domain smi_1683 7412c046c4a6d2c3477dcaaf6814585b 74 Gene3D G3DSA:1.10.1200.10 3 72 2.0E-22 T 26-04-2016 IPR009081 Phosphopantetheine binding ACP domain smi_1683 7412c046c4a6d2c3477dcaaf6814585b 74 SUPERFAMILY SSF47336 3 72 7.98E-18 T 26-04-2016 IPR009081 Phosphopantetheine binding ACP domain smi_1683 7412c046c4a6d2c3477dcaaf6814585b 74 Hamap MF_01217 Acyl carrier protein [acpP]. 2 73 18.131 T 26-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 smi_0933 7ae01a14772007f726e9cb89f3789ec3 330 Gene3D G3DSA:2.10.270.10 286 327 4.1E-10 T 26-04-2016 smi_0933 7ae01a14772007f726e9cb89f3789ec3 330 PANTHER PTHR30619:SF1 1 9 1.4E-58 T 26-04-2016 smi_0933 7ae01a14772007f726e9cb89f3789ec3 330 PANTHER PTHR30619:SF1 27 308 1.4E-58 T 26-04-2016 smi_0933 7ae01a14772007f726e9cb89f3789ec3 330 Gene3D G3DSA:3.60.15.10 1 223 7.7E-20 T 26-04-2016 IPR001279 Metallo-beta-lactamase smi_0933 7ae01a14772007f726e9cb89f3789ec3 330 SUPERFAMILY SSF56281 1 232 2.8E-35 T 26-04-2016 IPR001279 Metallo-beta-lactamase smi_0933 7ae01a14772007f726e9cb89f3789ec3 330 PANTHER PTHR30619 1 9 1.4E-58 T 26-04-2016 smi_0933 7ae01a14772007f726e9cb89f3789ec3 330 PANTHER PTHR30619 27 308 1.4E-58 T 26-04-2016 smi_0933 7ae01a14772007f726e9cb89f3789ec3 330 SUPERFAMILY SSF69360 284 328 4.32E-8 T 26-04-2016 smi_0933 7ae01a14772007f726e9cb89f3789ec3 330 Pfam PF00753 Metallo-beta-lactamase superfamily 40 176 7.2E-8 T 26-04-2016 IPR001279 Metallo-beta-lactamase smi_1234 c2d542aa3bb0c02393e316b3d79c0b67 359 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 259 276 1.07E-35 T 26-04-2016 smi_1234 c2d542aa3bb0c02393e316b3d79c0b67 359 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 173 187 1.07E-35 T 26-04-2016 smi_1234 c2d542aa3bb0c02393e316b3d79c0b67 359 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 242 258 1.07E-35 T 26-04-2016 smi_1234 c2d542aa3bb0c02393e316b3d79c0b67 359 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 212 226 1.07E-35 T 26-04-2016 smi_1234 c2d542aa3bb0c02393e316b3d79c0b67 359 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 284 295 1.07E-35 T 26-04-2016 smi_1234 c2d542aa3bb0c02393e316b3d79c0b67 359 Gene3D G3DSA:3.50.30.20 2 144 8.1E-61 T 26-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 smi_1234 c2d542aa3bb0c02393e316b3d79c0b67 359 SMART SM01097 2 132 1.5E-89 T 26-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 smi_1234 c2d542aa3bb0c02393e316b3d79c0b67 359 PANTHER PTHR11405 2 358 7.9E-223 T 26-04-2016 smi_1234 c2d542aa3bb0c02393e316b3d79c0b67 359 PRINTS PR00096 Glutamine amidotransferase superfamily signature 215 224 1.01E-11 T 26-04-2016 smi_1234 c2d542aa3bb0c02393e316b3d79c0b67 359 PRINTS PR00096 Glutamine amidotransferase superfamily signature 242 253 1.01E-11 T 26-04-2016 smi_1234 c2d542aa3bb0c02393e316b3d79c0b67 359 PRINTS PR00096 Glutamine amidotransferase superfamily signature 327 340 1.01E-11 T 26-04-2016 smi_1234 c2d542aa3bb0c02393e316b3d79c0b67 359 PRINTS PR00097 Anthranilate synthase component II signature 215 224 7.38E-7 T 26-04-2016 smi_1234 c2d542aa3bb0c02393e316b3d79c0b67 359 PRINTS PR00097 Anthranilate synthase component II signature 327 340 7.38E-7 T 26-04-2016 smi_1234 c2d542aa3bb0c02393e316b3d79c0b67 359 PRINTS PR00097 Anthranilate synthase component II signature 242 253 7.38E-7 T 26-04-2016 smi_1234 c2d542aa3bb0c02393e316b3d79c0b67 359 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 2 356 47.792 T 26-04-2016 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 smi_1234 c2d542aa3bb0c02393e316b3d79c0b67 359 Gene3D G3DSA:3.40.50.880 156 356 6.3E-68 T 26-04-2016 IPR029062 Class I glutamine amidotransferase-like smi_1234 c2d542aa3bb0c02393e316b3d79c0b67 359 SUPERFAMILY SSF52021 2 145 9.15E-57 T 26-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 smi_1234 c2d542aa3bb0c02393e316b3d79c0b67 359 SUPERFAMILY SSF52317 140 356 1.56E-58 T 26-04-2016 IPR029062 Class I glutamine amidotransferase-like smi_1234 c2d542aa3bb0c02393e316b3d79c0b67 359 Pfam PF00117 Glutamine amidotransferase class-I 175 350 3.5E-47 T 26-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 smi_1234 c2d542aa3bb0c02393e316b3d79c0b67 359 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 5 353 3.1E-145 T 26-04-2016 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 smi_1234 c2d542aa3bb0c02393e316b3d79c0b67 359 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 4 130 6.6E-53 T 26-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 smi_0445 c6a723f7a71b889ae92bd5d91cc9c45b 586 Pfam PF03496 ADP-ribosyltransferase exoenzyme 394 571 1.5E-18 T 26-04-2016 IPR003540 ADP ribosyltransferase GO:0005576|GO:0009405 smi_0445 c6a723f7a71b889ae92bd5d91cc9c45b 586 Gene3D G3DSA:3.90.176.10 386 584 4.0E-35 T 26-04-2016 smi_0445 c6a723f7a71b889ae92bd5d91cc9c45b 586 Pfam PF04233 Phage Mu protein F like protein 201 306 3.8E-13 T 26-04-2016 IPR006528 Phage head morphogenesis domain smi_0445 c6a723f7a71b889ae92bd5d91cc9c45b 586 TIGRFAM TIGR01641 phageSPP1_gp7: phage head morphogenesis protein, SPP1 gp7 family 203 308 1.2E-22 T 26-04-2016 IPR006528 Phage head morphogenesis domain smi_0445 c6a723f7a71b889ae92bd5d91cc9c45b 586 SUPERFAMILY SSF56399 394 566 2.56E-27 T 26-04-2016 smi_0485 a7ab779f86c7692232f0f9cc2811cf96 285 PANTHER PTHR37038 3 281 1.5E-44 T 26-04-2016 smi_0485 a7ab779f86c7692232f0f9cc2811cf96 285 PANTHER PTHR37038:SF1 3 281 1.5E-44 T 26-04-2016 smi_0485 a7ab779f86c7692232f0f9cc2811cf96 285 TIGRFAM TIGR01716 RGG_Cterm: transcriptional activator, Rgg/GadR/MutR family, C-terminal domain 64 284 1.2E-41 T 26-04-2016 IPR010057 Transcription activator MutR, C-terminal smi_0485 a7ab779f86c7692232f0f9cc2811cf96 285 Pfam PF01381 Helix-turn-helix 9 59 6.6E-9 T 26-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 smi_0485 a7ab779f86c7692232f0f9cc2811cf96 285 SMART SM00530 7 61 1.1E-6 T 26-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 smi_0485 a7ab779f86c7692232f0f9cc2811cf96 285 SUPERFAMILY SSF47413 3 63 3.85E-10 T 26-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 smi_0485 a7ab779f86c7692232f0f9cc2811cf96 285 Gene3D G3DSA:1.10.260.40 3 66 6.9E-9 T 26-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 smi_1961 0482c0f9094892d9c7536beaa0a75fa0 637 SMART SM01228 549 620 9.3E-40 T 26-04-2016 smi_1961 0482c0f9094892d9c7536beaa0a75fa0 637 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 9 624 6.6E-275 T 26-04-2016 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 smi_1961 0482c0f9094892d9c7536beaa0a75fa0 637 PANTHER PTHR11806 1 626 0.0 T 26-04-2016 smi_1961 0482c0f9094892d9c7536beaa0a75fa0 637 PANTHER PTHR11806:SF0 1 626 0.0 T 26-04-2016 smi_1961 0482c0f9094892d9c7536beaa0a75fa0 637 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 7 627 41.327 T 26-04-2016 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 smi_1961 0482c0f9094892d9c7536beaa0a75fa0 637 SUPERFAMILY SSF51905 8 68 1.3E-43 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 smi_1961 0482c0f9094892d9c7536beaa0a75fa0 637 SUPERFAMILY SSF51905 99 264 1.3E-43 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 smi_1961 0482c0f9094892d9c7536beaa0a75fa0 637 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 276 290 - T 26-04-2016 IPR020595 MnmG-related, conserved site smi_1961 0482c0f9094892d9c7536beaa0a75fa0 637 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 153 162 5.8E-6 T 26-04-2016 smi_1961 0482c0f9094892d9c7536beaa0a75fa0 637 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 10 32 5.8E-6 T 26-04-2016 smi_1961 0482c0f9094892d9c7536beaa0a75fa0 637 Pfam PF01134 Glucose inhibited division protein A 10 402 9.2E-166 T 26-04-2016 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 smi_1961 0482c0f9094892d9c7536beaa0a75fa0 637 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 371 394 - T 26-04-2016 IPR020595 MnmG-related, conserved site smi_1961 0482c0f9094892d9c7536beaa0a75fa0 637 Pfam PF13932 GidA associated domain 404 619 1.3E-70 T 26-04-2016 IPR026904 GidA associated domain 3 smi_1961 0482c0f9094892d9c7536beaa0a75fa0 637 Gene3D G3DSA:3.50.50.60 8 224 4.2E-34 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 smi_1393 10f2e87940d692f2fdc3ec736fa171fa 414 SUPERFAMILY SSF52218 1 173 3.62E-37 T 26-04-2016 IPR029039 Flavoprotein-like domain smi_1393 10f2e87940d692f2fdc3ec736fa171fa 414 Gene3D G3DSA:3.40.50.360 1 184 4.7E-45 T 26-04-2016 IPR029039 Flavoprotein-like domain smi_1393 10f2e87940d692f2fdc3ec736fa171fa 414 Pfam PF03358 NADPH-dependent FMN reductase 1 147 5.7E-33 T 26-04-2016 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 smi_1393 10f2e87940d692f2fdc3ec736fa171fa 414 Pfam PF13596 PAS domain 242 355 7.5E-27 T 26-04-2016 smi_1393 10f2e87940d692f2fdc3ec736fa171fa 414 PANTHER PTHR30543:SF6 1 194 1.5E-89 T 26-04-2016 smi_1393 10f2e87940d692f2fdc3ec736fa171fa 414 Gene3D G3DSA:3.30.450.20 223 371 3.8E-34 T 26-04-2016 smi_1393 10f2e87940d692f2fdc3ec736fa171fa 414 PANTHER PTHR30543 1 194 1.5E-89 T 26-04-2016 smi_0304 806a73162121cff8e506b3b405624e1c 264 Pfam PF13353 4Fe-4S single cluster domain 24 151 2.8E-16 T 26-04-2016 smi_0304 806a73162121cff8e506b3b405624e1c 264 PANTHER PTHR30352 5 250 2.4E-123 T 26-04-2016 smi_0304 806a73162121cff8e506b3b405624e1c 264 PANTHER PTHR30352:SF9 5 250 2.4E-123 T 26-04-2016 smi_0304 806a73162121cff8e506b3b405624e1c 264 ProSitePatterns PS01087 Radical activating enzymes signature. 26 47 - T 26-04-2016 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 smi_0304 806a73162121cff8e506b3b405624e1c 264 Pfam PF04055 Radical SAM superfamily 32 197 4.3E-31 T 26-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 smi_0304 806a73162121cff8e506b3b405624e1c 264 SUPERFAMILY SSF102114 31 233 7.72E-28 T 26-04-2016 smi_0304 806a73162121cff8e506b3b405624e1c 264 Gene3D G3DSA:3.80.30.10 79 254 2.4E-65 T 26-04-2016 smi_0304 806a73162121cff8e506b3b405624e1c 264 TIGRFAM TIGR02493 PFLA: pyruvate formate-lyase 1-activating enzyme 15 251 2.4E-93 T 26-04-2016 IPR012838 Pyruvate formate-lyase activating enzyme GO:0043365|GO:0055114 smi_1179 ed74386b662bd69c7573610a61b2faea 324 Pfam PF01515 Phosphate acetyl/butaryl transferase 5 318 1.4E-115 T 26-04-2016 IPR002505 Phosphate acetyl/butaryl transferase GO:0008152|GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 smi_1179 ed74386b662bd69c7573610a61b2faea 324 PANTHER PTHR23406:SF3 24 324 2.0E-52 T 26-04-2016 smi_1179 ed74386b662bd69c7573610a61b2faea 324 Gene3D G3DSA:3.40.50.10750 135 294 2.4E-68 T 26-04-2016 smi_1179 ed74386b662bd69c7573610a61b2faea 324 PANTHER PTHR23406 24 324 2.0E-52 T 26-04-2016 smi_1179 ed74386b662bd69c7573610a61b2faea 324 PIRSF PIRSF000428 1 324 1.2E-105 T 26-04-2016 IPR012147 Phosphate acetyl/butyryltransferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 smi_1179 ed74386b662bd69c7573610a61b2faea 324 SUPERFAMILY SSF53659 3 321 3.17E-94 T 26-04-2016 smi_1179 ed74386b662bd69c7573610a61b2faea 324 TIGRFAM TIGR00651 pta: phosphate acetyltransferase 18 318 1.6E-114 T 26-04-2016 IPR004614 Phosphate acetyltransferase GO:0016407 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 smi_0266 cac363dea71fefc377851eaf181e1e90 413 PANTHER PTHR34448:SF3 2 413 9.6E-246 T 26-04-2016 smi_0266 cac363dea71fefc377851eaf181e1e90 413 Pfam PF02073 Thermophilic metalloprotease (M29) 7 411 8.8E-162 T 26-04-2016 IPR000787 Peptidase M29, aminopeptidase II GO:0004177|GO:0006508 smi_0266 cac363dea71fefc377851eaf181e1e90 413 PANTHER PTHR34448 2 413 9.6E-246 T 26-04-2016 smi_0266 cac363dea71fefc377851eaf181e1e90 413 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 366 388 8.3E-54 T 26-04-2016 IPR000787 Peptidase M29, aminopeptidase II GO:0004177|GO:0006508 smi_0266 cac363dea71fefc377851eaf181e1e90 413 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 327 348 8.3E-54 T 26-04-2016 IPR000787 Peptidase M29, aminopeptidase II GO:0004177|GO:0006508 smi_0266 cac363dea71fefc377851eaf181e1e90 413 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 392 411 8.3E-54 T 26-04-2016 IPR000787 Peptidase M29, aminopeptidase II GO:0004177|GO:0006508 smi_0266 cac363dea71fefc377851eaf181e1e90 413 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 82 101 8.3E-54 T 26-04-2016 IPR000787 Peptidase M29, aminopeptidase II GO:0004177|GO:0006508 smi_0266 cac363dea71fefc377851eaf181e1e90 413 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 248 267 8.3E-54 T 26-04-2016 IPR000787 Peptidase M29, aminopeptidase II GO:0004177|GO:0006508 smi_0266 cac363dea71fefc377851eaf181e1e90 413 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 304 324 8.3E-54 T 26-04-2016 IPR000787 Peptidase M29, aminopeptidase II GO:0004177|GO:0006508 smi_0266 cac363dea71fefc377851eaf181e1e90 413 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 159 181 8.3E-54 T 26-04-2016 IPR000787 Peptidase M29, aminopeptidase II GO:0004177|GO:0006508 smi_0266 cac363dea71fefc377851eaf181e1e90 413 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 17 34 8.3E-54 T 26-04-2016 IPR000787 Peptidase M29, aminopeptidase II GO:0004177|GO:0006508 smi_0266 cac363dea71fefc377851eaf181e1e90 413 SUPERFAMILY SSF144052 6 412 4.71E-142 T 26-04-2016 smi_0806 ffec0da2a9d9bd3c7e78f05d02e39226 461 SUPERFAMILY SSF47917 365 421 4.87E-5 T 26-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 smi_0806 ffec0da2a9d9bd3c7e78f05d02e39226 461 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 342 351 - T 26-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 smi_0806 ffec0da2a9d9bd3c7e78f05d02e39226 461 PANTHER PTHR15184:SF11 6 457 1.6E-271 T 26-04-2016 smi_0806 ffec0da2a9d9bd3c7e78f05d02e39226 461 PIRSF PIRSF039114 1 460 6.3E-244 T 26-04-2016 IPR022879 V-type ATP synthase regulatory subunit B/beta smi_0806 ffec0da2a9d9bd3c7e78f05d02e39226 461 PANTHER PTHR15184 6 457 1.6E-271 T 26-04-2016 smi_0806 ffec0da2a9d9bd3c7e78f05d02e39226 461 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 133 351 5.8E-67 T 26-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 smi_0806 ffec0da2a9d9bd3c7e78f05d02e39226 461 Gene3D G3DSA:1.10.1140.10 366 424 1.4E-4 T 26-04-2016 IPR024034 ATPase, F1 complex beta subunit/V1 complex, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 smi_0806 ffec0da2a9d9bd3c7e78f05d02e39226 461 Hamap MF_00310 V-type ATP synthase beta chain [atpB]. 4 460 59.813 T 26-04-2016 IPR022879 V-type ATP synthase regulatory subunit B/beta smi_0806 ffec0da2a9d9bd3c7e78f05d02e39226 461 Gene3D G3DSA:3.40.50.300 79 355 1.7E-100 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0806 ffec0da2a9d9bd3c7e78f05d02e39226 461 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 11 74 3.6E-11 T 26-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 smi_0806 ffec0da2a9d9bd3c7e78f05d02e39226 461 SUPERFAMILY SSF52540 80 355 5.8E-83 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0577 1bb82b0277c01d2a781eb64e9c74d0bd 231 Pfam PF04172 LrgB-like family 15 227 2.6E-65 T 26-04-2016 IPR007300 CidB/LrgB family smi_0577 1bb82b0277c01d2a781eb64e9c74d0bd 231 PANTHER PTHR30249:SF5 1 229 2.3E-65 T 26-04-2016 smi_0577 1bb82b0277c01d2a781eb64e9c74d0bd 231 PANTHER PTHR30249 1 229 2.3E-65 T 26-04-2016 smi_1905 329ffab591e7ad0fff65a582740b3b07 208 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 2 204 38.644 T 26-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_1905 329ffab591e7ad0fff65a582740b3b07 208 ProSitePatterns PS00474 Ribosomal protein L3 signature. 100 123 - T 26-04-2016 IPR019926 Ribosomal protein L3, conserved site smi_1905 329ffab591e7ad0fff65a582740b3b07 208 Gene3D G3DSA:2.40.30.10 4 33 1.3E-14 T 26-04-2016 smi_1905 329ffab591e7ad0fff65a582740b3b07 208 Gene3D G3DSA:2.40.30.10 155 206 1.3E-14 T 26-04-2016 smi_1905 329ffab591e7ad0fff65a582740b3b07 208 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 4 201 6.7E-84 T 26-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_1905 329ffab591e7ad0fff65a582740b3b07 208 Pfam PF00297 Ribosomal protein L3 98 177 1.3E-14 T 26-04-2016 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_1905 329ffab591e7ad0fff65a582740b3b07 208 SUPERFAMILY SSF50447 1 206 7.51E-79 T 26-04-2016 IPR009000 Translation protein, beta-barrel domain smi_1905 329ffab591e7ad0fff65a582740b3b07 208 PANTHER PTHR11229 1 208 7.1E-110 T 26-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_1905 329ffab591e7ad0fff65a582740b3b07 208 Gene3D G3DSA:4.10.960.10 82 154 1.1E-32 T 26-04-2016 smi_1280 644239d359d2e101543a8c7b325488cd 304 Gene3D G3DSA:2.10.270.10 186 304 8.9E-33 T 26-04-2016 smi_1280 644239d359d2e101543a8c7b325488cd 304 Pfam PF01473 Putative cell wall binding repeat 228 245 0.0029 T 26-04-2016 IPR018337 Cell wall/choline-binding repeat smi_1280 644239d359d2e101543a8c7b325488cd 304 Pfam PF01473 Putative cell wall binding repeat 267 284 9.6E-4 T 26-04-2016 IPR018337 Cell wall/choline-binding repeat smi_1280 644239d359d2e101543a8c7b325488cd 304 Pfam PF01473 Putative cell wall binding repeat 247 265 1.2E-7 T 26-04-2016 IPR018337 Cell wall/choline-binding repeat smi_1280 644239d359d2e101543a8c7b325488cd 304 Pfam PF01473 Putative cell wall binding repeat 208 224 0.056 T 26-04-2016 IPR018337 Cell wall/choline-binding repeat smi_1280 644239d359d2e101543a8c7b325488cd 304 SUPERFAMILY SSF69360 183 304 1.15E-37 T 26-04-2016 smi_0576 793b94a7c76c29f1c21a6c826b1e7c2d 124 PANTHER PTHR33931 1 113 3.6E-26 T 26-04-2016 smi_0576 793b94a7c76c29f1c21a6c826b1e7c2d 124 Pfam PF03788 LrgA family 15 107 1.9E-26 T 26-04-2016 IPR005538 LrgA/CidA family GO:0016021 smi_0576 793b94a7c76c29f1c21a6c826b1e7c2d 124 PANTHER PTHR33931:SF2 1 113 3.6E-26 T 26-04-2016 smi_0305 4c65299020f182a796ab395bd9db1745 236 Gene3D G3DSA:3.40.50.300 2 221 1.2E-58 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0305 4c65299020f182a796ab395bd9db1745 236 PANTHER PTHR24220 6 220 1.7E-86 T 26-04-2016 smi_0305 4c65299020f182a796ab395bd9db1745 236 SMART SM00382 29 207 1.8E-8 T 26-04-2016 IPR003593 AAA+ ATPase domain smi_0305 4c65299020f182a796ab395bd9db1745 236 SUPERFAMILY SSF52540 4 224 1.26E-55 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0305 4c65299020f182a796ab395bd9db1745 236 PANTHER PTHR24220:SF523 6 220 1.7E-86 T 26-04-2016 smi_0305 4c65299020f182a796ab395bd9db1745 236 Pfam PF00005 ABC transporter 20 159 1.4E-27 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 smi_1349 3b6277891a5fd9512ce2168426628d59 287 Gene3D G3DSA:1.10.260.40 4 94 2.3E-15 T 26-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 smi_1349 3b6277891a5fd9512ce2168426628d59 287 SMART SM00530 7 61 1.5E-12 T 26-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 smi_1349 3b6277891a5fd9512ce2168426628d59 287 Pfam PF01381 Helix-turn-helix 11 61 1.6E-13 T 26-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 smi_1349 3b6277891a5fd9512ce2168426628d59 287 SUPERFAMILY SSF47413 4 70 2.62E-14 T 26-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 smi_1349 3b6277891a5fd9512ce2168426628d59 287 SUPERFAMILY SSF48452 151 251 7.17E-5 T 26-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 smi_1648 17b3392b6727b8eb8695e065eedcbb02 503 Gene3D G3DSA:3.40.50.2000 318 459 6.3E-14 T 26-04-2016 smi_1648 17b3392b6727b8eb8695e065eedcbb02 503 SUPERFAMILY SSF53756 177 501 3.82E-38 T 26-04-2016 smi_1648 17b3392b6727b8eb8695e065eedcbb02 503 TIGRFAM TIGR02918 TIGR02918: accessory Sec system glycosylation protein GtfA 1 500 1.8E-251 T 26-04-2016 IPR014267 Glycosyltransferase Gtf1 GO:0016757 KEGG: 00051+2.4.1.-|KEGG: 00512+2.4.1.-|KEGG: 00513+2.4.1.-|KEGG: 00514+2.4.1.-|KEGG: 00522+2.4.1.-|KEGG: 00533+2.4.1.-|KEGG: 00540+2.4.1.-|KEGG: 00550+2.4.1.-|KEGG: 00561+2.4.1.-|KEGG: 00563+2.4.1.-|KEGG: 00600+2.4.1.-|KEGG: 00601+2.4.1.-|KEGG: 00603+2.4.1.-|KEGG: 00604+2.4.1.-|KEGG: 00906+2.4.1.-|KEGG: 00908+2.4.1.-|KEGG: 00941+2.4.1.-|KEGG: 00942+2.4.1.-|KEGG: 00944+2.4.1.-|KEGG: 00945+2.4.1.-|KEGG: 00965+2.4.1.- smi_1648 17b3392b6727b8eb8695e065eedcbb02 503 PANTHER PTHR12526 323 501 3.9E-29 T 26-04-2016 smi_1648 17b3392b6727b8eb8695e065eedcbb02 503 Pfam PF00534 Glycosyl transferases group 1 319 458 7.2E-21 T 26-04-2016 IPR001296 Glycosyl transferase, family 1 smi_1648 17b3392b6727b8eb8695e065eedcbb02 503 Hamap MF_01472 Glycosyltransferase Gtf1 [gtf1]. 2 500 35.854 T 26-04-2016 IPR014267 Glycosyltransferase Gtf1 GO:0016757 KEGG: 00051+2.4.1.-|KEGG: 00512+2.4.1.-|KEGG: 00513+2.4.1.-|KEGG: 00514+2.4.1.-|KEGG: 00522+2.4.1.-|KEGG: 00533+2.4.1.-|KEGG: 00540+2.4.1.-|KEGG: 00550+2.4.1.-|KEGG: 00561+2.4.1.-|KEGG: 00563+2.4.1.-|KEGG: 00600+2.4.1.-|KEGG: 00601+2.4.1.-|KEGG: 00603+2.4.1.-|KEGG: 00604+2.4.1.-|KEGG: 00906+2.4.1.-|KEGG: 00908+2.4.1.-|KEGG: 00941+2.4.1.-|KEGG: 00942+2.4.1.-|KEGG: 00944+2.4.1.-|KEGG: 00945+2.4.1.-|KEGG: 00965+2.4.1.- smi_1678 5f4c3a4528c3be9cd2c0ec9ad6f387eb 161 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 117 134 - T 26-04-2016 IPR001882 Biotin-binding site smi_1678 5f4c3a4528c3be9cd2c0ec9ad6f387eb 161 PANTHER PTHR23151 1 160 1.6E-30 T 26-04-2016 smi_1678 5f4c3a4528c3be9cd2c0ec9ad6f387eb 161 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 90 103 6.4E-12 T 26-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 smi_1678 5f4c3a4528c3be9cd2c0ec9ad6f387eb 161 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 122 135 6.4E-12 T 26-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 smi_1678 5f4c3a4528c3be9cd2c0ec9ad6f387eb 161 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 107 121 6.4E-12 T 26-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 smi_1678 5f4c3a4528c3be9cd2c0ec9ad6f387eb 161 Gene3D G3DSA:2.40.50.100 84 161 6.2E-27 T 26-04-2016 smi_1678 5f4c3a4528c3be9cd2c0ec9ad6f387eb 161 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 1 161 1.2E-39 T 26-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 smi_1678 5f4c3a4528c3be9cd2c0ec9ad6f387eb 161 SUPERFAMILY SSF51230 87 160 5.76E-22 T 26-04-2016 IPR011053 Single hybrid motif smi_1678 5f4c3a4528c3be9cd2c0ec9ad6f387eb 161 Pfam PF00364 Biotin-requiring enzyme 88 160 1.1E-19 T 26-04-2016 IPR000089 Biotin/lipoyl attachment smi_1588 610632b57db8a4032826a917e0638429 252 SUPERFAMILY SSF52540 3 239 3.33E-77 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1588 610632b57db8a4032826a917e0638429 252 SMART SM00382 28 216 3.0E-15 T 26-04-2016 IPR003593 AAA+ ATPase domain smi_1588 610632b57db8a4032826a917e0638429 252 PIRSF PIRSF039085 1 245 5.7E-102 T 26-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 smi_1588 610632b57db8a4032826a917e0638429 252 PANTHER PTHR24220 5 249 2.8E-135 T 26-04-2016 smi_1588 610632b57db8a4032826a917e0638429 252 PANTHER PTHR24220:SF474 5 249 2.8E-135 T 26-04-2016 smi_1588 610632b57db8a4032826a917e0638429 252 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 26-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 smi_1588 610632b57db8a4032826a917e0638429 252 Pfam PF00005 ABC transporter 19 168 9.2E-36 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 smi_1588 610632b57db8a4032826a917e0638429 252 Gene3D G3DSA:3.40.50.300 2 241 1.8E-81 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1003 4a9e928aadcfe9e32dda0795d2353b05 1042 Pfam PF02811 PHP domain 16 121 8.9E-14 T 26-04-2016 IPR004013 PHP domain GO:0003824 smi_1003 4a9e928aadcfe9e32dda0795d2353b05 1042 SUPERFAMILY SSF89550 18 97 6.28E-8 T 26-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 smi_1003 4a9e928aadcfe9e32dda0795d2353b05 1042 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 169 933 3.0E-210 T 26-04-2016 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 smi_1003 4a9e928aadcfe9e32dda0795d2353b05 1042 SMART SM00481 12 79 5.8E-10 T 26-04-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 smi_1003 4a9e928aadcfe9e32dda0795d2353b05 1042 Pfam PF01336 OB-fold nucleic acid binding domain 907 971 2.1E-10 T 26-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 smi_1003 4a9e928aadcfe9e32dda0795d2353b05 1042 Gene3D G3DSA:3.20.20.140 18 97 4.1E-7 T 26-04-2016 smi_1003 4a9e928aadcfe9e32dda0795d2353b05 1042 PANTHER PTHR32294:SF0 12 1042 0.0 T 26-04-2016 smi_1003 4a9e928aadcfe9e32dda0795d2353b05 1042 PANTHER PTHR32294 12 1042 0.0 T 26-04-2016 smi_1003 4a9e928aadcfe9e32dda0795d2353b05 1042 Gene3D G3DSA:2.40.50.140 884 972 9.9E-10 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold smi_1003 4a9e928aadcfe9e32dda0795d2353b05 1042 Pfam PF14579 Helix-hairpin-helix motif 735 819 1.2E-11 T 26-04-2016 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 smi_1003 4a9e928aadcfe9e32dda0795d2353b05 1042 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 251 666 3.5E-154 T 26-04-2016 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 smi_0694 c3bb32bd7ed9512ac0be1bd8bbf86968 440 SMART SM00387 339 440 8.1E-5 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain smi_0694 c3bb32bd7ed9512ac0be1bd8bbf86968 440 Gene3D G3DSA:3.30.565.10 300 437 6.3E-13 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain smi_0694 c3bb32bd7ed9512ac0be1bd8bbf86968 440 Pfam PF00672 HAMP domain 147 211 5.0E-12 T 26-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 smi_0694 c3bb32bd7ed9512ac0be1bd8bbf86968 440 Gene3D G3DSA:1.10.287.130 223 292 2.5E-10 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 smi_0694 c3bb32bd7ed9512ac0be1bd8bbf86968 440 SUPERFAMILY SSF55874 298 438 3.67E-15 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain smi_0694 c3bb32bd7ed9512ac0be1bd8bbf86968 440 SMART SM00304 164 216 5.3E-8 T 26-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 smi_0694 c3bb32bd7ed9512ac0be1bd8bbf86968 440 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 345 427 2.8E-5 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain smi_0694 c3bb32bd7ed9512ac0be1bd8bbf86968 440 SUPERFAMILY SSF158472 164 214 2.88E-7 T 26-04-2016 smi_0694 c3bb32bd7ed9512ac0be1bd8bbf86968 440 SMART SM00388 231 297 5.0E-7 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 smi_0694 c3bb32bd7ed9512ac0be1bd8bbf86968 440 SUPERFAMILY SSF47384 217 294 1.39E-10 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 smi_0694 c3bb32bd7ed9512ac0be1bd8bbf86968 440 PANTHER PTHR24423 158 415 7.0E-26 T 26-04-2016 smi_0694 c3bb32bd7ed9512ac0be1bd8bbf86968 440 Pfam PF00512 His Kinase A (phospho-acceptor) domain 232 295 1.8E-7 T 26-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 smi_0147 b9fe271f0412f694c7a8c545a241b925 299 Gene3D G3DSA:3.90.550.10 6 279 5.2E-71 T 26-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases smi_0147 b9fe271f0412f694c7a8c545a241b925 299 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 5 269 2.5E-108 T 26-04-2016 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343 smi_0147 b9fe271f0412f694c7a8c545a241b925 299 PANTHER PTHR22572 7 284 1.3E-110 T 26-04-2016 smi_0147 b9fe271f0412f694c7a8c545a241b925 299 SUPERFAMILY SSF53448 2 273 4.06E-66 T 26-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases smi_0147 b9fe271f0412f694c7a8c545a241b925 299 Pfam PF00483 Nucleotidyl transferase 7 267 9.5E-33 T 26-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 smi_0147 b9fe271f0412f694c7a8c545a241b925 299 PANTHER PTHR22572:SF14 7 284 1.3E-110 T 26-04-2016 smi_1827 a02437750704c0a1a64952474de67155 136 PANTHER PTHR34297 2 136 1.1E-50 T 26-04-2016 smi_1827 a02437750704c0a1a64952474de67155 136 Pfam PF03780 Asp23 family, cell envelope-related function 24 132 3.7E-33 T 26-04-2016 IPR005531 Alkaline shock protein Asp23 smi_1827 a02437750704c0a1a64952474de67155 136 PANTHER PTHR34297:SF2 2 136 1.1E-50 T 26-04-2016 smi_0851 a5e2e2c0338e0b3b37f1d86869c6c47c 224 Pfam PF00072 Response regulator receiver domain 4 112 2.6E-22 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 smi_0851 a5e2e2c0338e0b3b37f1d86869c6c47c 224 PANTHER PTHR26402 2 222 7.7E-113 T 26-04-2016 smi_0851 a5e2e2c0338e0b3b37f1d86869c6c47c 224 SMART SM00448 2 112 6.7E-35 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 smi_0851 a5e2e2c0338e0b3b37f1d86869c6c47c 224 Gene3D G3DSA:1.10.10.10 124 221 4.3E-24 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain smi_0851 a5e2e2c0338e0b3b37f1d86869c6c47c 224 SUPERFAMILY SSF52172 1 177 4.23E-36 T 26-04-2016 IPR011006 CheY-like superfamily smi_0851 a5e2e2c0338e0b3b37f1d86869c6c47c 224 SMART SM00862 145 220 1.6E-15 T 26-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 smi_0851 a5e2e2c0338e0b3b37f1d86869c6c47c 224 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 220 3.3E-18 T 26-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 smi_0851 a5e2e2c0338e0b3b37f1d86869c6c47c 224 Gene3D G3DSA:3.40.50.2300 2 121 3.7E-34 T 26-04-2016 smi_0851 a5e2e2c0338e0b3b37f1d86869c6c47c 224 PANTHER PTHR26402:SF518 2 222 7.7E-113 T 26-04-2016 smi_0850 ffe14a2db3b293c1cffd68a8bfa587ec 848 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 126 141 4.44E-31 T 26-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 smi_0850 ffe14a2db3b293c1cffd68a8bfa587ec 848 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 289 304 4.44E-31 T 26-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 smi_0850 ffe14a2db3b293c1cffd68a8bfa587ec 848 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 308 320 4.44E-31 T 26-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 smi_0850 ffe14a2db3b293c1cffd68a8bfa587ec 848 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 254 264 4.44E-31 T 26-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 smi_0850 ffe14a2db3b293c1cffd68a8bfa587ec 848 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 175 190 4.44E-31 T 26-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 smi_0850 ffe14a2db3b293c1cffd68a8bfa587ec 848 SUPERFAMILY SSF55486 200 449 4.1E-80 T 26-04-2016 smi_0850 ffe14a2db3b293c1cffd68a8bfa587ec 848 PANTHER PTHR11533:SF163 9 846 0.0 T 26-04-2016 smi_0850 ffe14a2db3b293c1cffd68a8bfa587ec 848 SUPERFAMILY SSF63737 10 192 1.29E-49 T 26-04-2016 smi_0850 ffe14a2db3b293c1cffd68a8bfa587ec 848 Pfam PF11838 ERAP1-like C-terminal domain 512 824 8.9E-40 T 26-04-2016 IPR024571 ERAP1-like C-terminal domain smi_0850 ffe14a2db3b293c1cffd68a8bfa587ec 848 Pfam PF01433 Peptidase family M1 9 382 1.3E-133 T 26-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 smi_0850 ffe14a2db3b293c1cffd68a8bfa587ec 848 PANTHER PTHR11533 9 846 0.0 T 26-04-2016 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase GO:0006508 smi_0850 ffe14a2db3b293c1cffd68a8bfa587ec 848 Gene3D G3DSA:1.10.390.10 302 451 1.1E-49 T 26-04-2016 smi_1392 a336334a45ae91d1653cb50f03376310 201 Pfam PF03358 NADPH-dependent FMN reductase 3 145 2.2E-33 T 26-04-2016 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 smi_1392 a336334a45ae91d1653cb50f03376310 201 PANTHER PTHR30543:SF6 1 194 9.5E-71 T 26-04-2016 smi_1392 a336334a45ae91d1653cb50f03376310 201 SUPERFAMILY SSF52218 3 172 8.73E-37 T 26-04-2016 IPR029039 Flavoprotein-like domain smi_1392 a336334a45ae91d1653cb50f03376310 201 PANTHER PTHR30543 1 194 9.5E-71 T 26-04-2016 smi_1392 a336334a45ae91d1653cb50f03376310 201 Gene3D G3DSA:3.40.50.360 1 185 6.1E-45 T 26-04-2016 IPR029039 Flavoprotein-like domain smi_1045 17401989152010a58b17149f9a874bc2 87 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 39 54 - T 26-04-2016 IPR002114 Phosphotransferase system, HPr serine phosphorylation site smi_1045 17401989152010a58b17149f9a874bc2 87 Gene3D G3DSA:3.30.1340.10 1 83 2.6E-33 T 26-04-2016 IPR000032 Phosphocarrier HPr protein-like smi_1045 17401989152010a58b17149f9a874bc2 87 PRINTS PR00107 Phosphocarrier protein signature 13 29 4.3E-26 T 26-04-2016 IPR000032 Phosphocarrier HPr protein-like smi_1045 17401989152010a58b17149f9a874bc2 87 PRINTS PR00107 Phosphocarrier protein signature 53 70 4.3E-26 T 26-04-2016 IPR000032 Phosphocarrier HPr protein-like smi_1045 17401989152010a58b17149f9a874bc2 87 PRINTS PR00107 Phosphocarrier protein signature 38 53 4.3E-26 T 26-04-2016 IPR000032 Phosphocarrier HPr protein-like smi_1045 17401989152010a58b17149f9a874bc2 87 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 82 9.0E-32 T 26-04-2016 IPR000032 Phosphocarrier HPr protein-like smi_1045 17401989152010a58b17149f9a874bc2 87 SUPERFAMILY SSF55594 1 83 6.15E-28 T 26-04-2016 IPR000032 Phosphocarrier HPr protein-like smi_1045 17401989152010a58b17149f9a874bc2 87 PANTHER PTHR33705 1 84 4.2E-36 T 26-04-2016 smi_1045 17401989152010a58b17149f9a874bc2 87 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 13 20 - T 26-04-2016 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site smi_1045 17401989152010a58b17149f9a874bc2 87 PANTHER PTHR33705:SF2 1 84 4.2E-36 T 26-04-2016 smi_1045 17401989152010a58b17149f9a874bc2 87 Pfam PF00381 PTS HPr component phosphorylation site 3 82 9.5E-29 T 26-04-2016 IPR000032 Phosphocarrier HPr protein-like smi_1545 43c31ac357b76b0cb9f0b153c1f715b8 623 Gene3D G3DSA:3.40.50.300 6 265 1.2E-44 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1545 43c31ac357b76b0cb9f0b153c1f715b8 623 Gene3D G3DSA:3.40.50.300 314 544 3.4E-50 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1545 43c31ac357b76b0cb9f0b153c1f715b8 623 Pfam PF16326 ABC transporter C-terminal domain 554 619 1.7E-16 T 26-04-2016 IPR032524 ABC transporter Uup, C-terminal GO:0003677 smi_1545 43c31ac357b76b0cb9f0b153c1f715b8 623 PANTHER PTHR19211 1 562 3.0E-188 T 26-04-2016 smi_1545 43c31ac357b76b0cb9f0b153c1f715b8 623 Pfam PF12848 ABC transporter 223 292 2.0E-10 T 26-04-2016 IPR032781 ABC-transporter extension domain smi_1545 43c31ac357b76b0cb9f0b153c1f715b8 623 Pfam PF00005 ABC transporter 20 184 2.8E-21 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 smi_1545 43c31ac357b76b0cb9f0b153c1f715b8 623 Pfam PF00005 ABC transporter 332 467 3.3E-23 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 smi_1545 43c31ac357b76b0cb9f0b153c1f715b8 623 SUPERFAMILY SSF52540 308 531 2.34E-48 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1545 43c31ac357b76b0cb9f0b153c1f715b8 623 SUPERFAMILY SSF52540 6 239 3.68E-45 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1545 43c31ac357b76b0cb9f0b153c1f715b8 623 SMART SM00382 341 512 1.6E-9 T 26-04-2016 IPR003593 AAA+ ATPase domain smi_1545 43c31ac357b76b0cb9f0b153c1f715b8 623 SMART SM00382 28 229 4.1E-9 T 26-04-2016 IPR003593 AAA+ ATPase domain smi_0480 e064724cf9e769489afe03330af2ffda 125 Pfam PF00436 Single-strand binding protein family 1 95 7.5E-26 T 26-04-2016 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 smi_0480 e064724cf9e769489afe03330af2ffda 125 PIRSF PIRSF002070 1 115 1.9E-27 T 26-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 smi_0480 e064724cf9e769489afe03330af2ffda 125 Gene3D G3DSA:2.40.50.140 2 111 2.1E-33 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold smi_0480 e064724cf9e769489afe03330af2ffda 125 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 1 111 4.1E-29 T 26-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 smi_0480 e064724cf9e769489afe03330af2ffda 125 PANTHER PTHR10302 1 101 2.4E-30 T 26-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 smi_0480 e064724cf9e769489afe03330af2ffda 125 Hamap MF_00984 Single-stranded DNA-binding protein. 1 100 27.173 T 26-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 smi_0480 e064724cf9e769489afe03330af2ffda 125 SUPERFAMILY SSF50249 2 125 7.54E-35 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold smi_0325 c087defcfea73e2740dd226d8d4d0686 355 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 239 301 8.0E-11 T 26-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 smi_0325 c087defcfea73e2740dd226d8d4d0686 355 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 237 322 3.7E-16 T 26-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 smi_0325 c087defcfea73e2740dd226d8d4d0686 355 ProSitePatterns PS00211 ABC transporters family signature. 160 174 - T 26-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 smi_0325 c087defcfea73e2740dd226d8d4d0686 355 PANTHER PTHR24220:SF503 10 350 2.7E-201 T 26-04-2016 smi_0325 c087defcfea73e2740dd226d8d4d0686 355 PANTHER PTHR24220 10 350 2.7E-201 T 26-04-2016 smi_0325 c087defcfea73e2740dd226d8d4d0686 355 Pfam PF00005 ABC transporter 29 187 2.1E-29 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 smi_0325 c087defcfea73e2740dd226d8d4d0686 355 SMART SM00382 37 237 4.8E-15 T 26-04-2016 IPR003593 AAA+ ATPase domain smi_0325 c087defcfea73e2740dd226d8d4d0686 355 Gene3D G3DSA:3.40.50.300 8 261 1.4E-69 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0325 c087defcfea73e2740dd226d8d4d0686 355 SUPERFAMILY SSF52540 8 258 9.4E-64 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1978 844a72dbf83f0dd0b0a4d45333cc99e7 206 Gene3D G3DSA:3.10.350.10 33 77 1.2E-16 T 26-04-2016 IPR018392 LysM domain smi_1978 844a72dbf83f0dd0b0a4d45333cc99e7 206 Pfam PF01476 LysM domain 35 77 7.5E-14 T 26-04-2016 IPR018392 LysM domain smi_1978 844a72dbf83f0dd0b0a4d45333cc99e7 206 SMART SM00257 34 78 5.9E-13 T 26-04-2016 IPR018392 LysM domain smi_1978 844a72dbf83f0dd0b0a4d45333cc99e7 206 SUPERFAMILY SSF54106 34 78 3.01E-11 T 26-04-2016 IPR018392 LysM domain smi_1912 740b81cf6a9fbdaabccbf99bcfcac22f 737 SUPERFAMILY SSF51998 138 704 2.17E-196 T 26-04-2016 smi_1912 740b81cf6a9fbdaabccbf99bcfcac22f 737 Pfam PF03477 ATP cone domain 17 107 1.1E-20 T 26-04-2016 IPR005144 ATP-cone domain smi_1912 740b81cf6a9fbdaabccbf99bcfcac22f 737 TIGRFAM TIGR02487 NrdD: anaerobic ribonucleoside-triphosphate reductase 132 722 4.1E-183 T 26-04-2016 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.17.4.2|KEGG: 00240+1.17.4.2|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 smi_1912 740b81cf6a9fbdaabccbf99bcfcac22f 737 ProSitePatterns PS00850 Glycine radical domain signature. 693 701 - T 26-04-2016 IPR019777 Formate C-acetyltransferase glycine radical, conserved site smi_1912 740b81cf6a9fbdaabccbf99bcfcac22f 737 Gene3D G3DSA:3.20.70.20 140 703 5.8E-189 T 26-04-2016 smi_1912 740b81cf6a9fbdaabccbf99bcfcac22f 737 Pfam PF13597 Anaerobic ribonucleoside-triphosphate reductase 133 722 2.8E-184 T 26-04-2016 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.17.4.2|KEGG: 00240+1.17.4.2|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 smi_1912 740b81cf6a9fbdaabccbf99bcfcac22f 737 PANTHER PTHR21075 8 728 1.4E-282 T 26-04-2016 smi_1917 d78c22f4b6745f26e5dcd786c41f00d9 416 Gene3D G3DSA:3.40.1190.10 3 284 1.8E-90 T 26-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 smi_1917 d78c22f4b6745f26e5dcd786c41f00d9 416 SUPERFAMILY SSF53623 3 284 1.7E-84 T 26-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 smi_1917 d78c22f4b6745f26e5dcd786c41f00d9 416 PANTHER PTHR11136 3 416 3.8E-125 T 26-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 smi_1917 d78c22f4b6745f26e5dcd786c41f00d9 416 SUPERFAMILY SSF53244 284 409 2.04E-18 T 26-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 smi_1917 d78c22f4b6745f26e5dcd786c41f00d9 416 PIRSF PIRSF001563 1 414 1.3E-121 T 26-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 smi_1917 d78c22f4b6745f26e5dcd786c41f00d9 416 ProSitePatterns PS01012 Folylpolyglutamate synthase signature 2. 137 152 - T 26-04-2016 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 smi_1917 d78c22f4b6745f26e5dcd786c41f00d9 416 PANTHER PTHR11136:SF0 3 416 3.8E-125 T 26-04-2016 smi_1917 d78c22f4b6745f26e5dcd786c41f00d9 416 Pfam PF08245 Mur ligase middle domain 42 256 8.2E-12 T 26-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 smi_1917 d78c22f4b6745f26e5dcd786c41f00d9 416 Gene3D G3DSA:3.90.190.20 286 410 1.2E-19 T 26-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 smi_1917 d78c22f4b6745f26e5dcd786c41f00d9 416 TIGRFAM TIGR01499 folC: bifunctional protein FolC 20 407 1.2E-126 T 26-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 smi_1490 f7789c53f857142d68ecb6bdb8300ab6 183 PANTHER PTHR13256:SF10 8 181 1.3E-51 T 26-04-2016 smi_1490 f7789c53f857142d68ecb6bdb8300ab6 183 Pfam PF13302 Acetyltransferase (GNAT) domain 13 154 1.4E-34 T 26-04-2016 IPR000182 GNAT domain GO:0008080 smi_1490 f7789c53f857142d68ecb6bdb8300ab6 183 Gene3D G3DSA:3.40.630.30 5 178 2.2E-51 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase smi_1490 f7789c53f857142d68ecb6bdb8300ab6 183 SUPERFAMILY SSF55729 7 178 1.59E-43 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase smi_1490 f7789c53f857142d68ecb6bdb8300ab6 183 PANTHER PTHR13256 8 181 1.3E-51 T 26-04-2016 smi_0539 7a8b267f991aed7020790d89a394c6de 409 Gene3D G3DSA:3.90.1150.10 274 400 4.7E-37 T 26-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 smi_0539 7a8b267f991aed7020790d89a394c6de 409 SUPERFAMILY SSF53383 5 400 8.46E-96 T 26-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase smi_0539 7a8b267f991aed7020790d89a394c6de 409 PANTHER PTHR30244 1 402 1.6E-199 T 26-04-2016 smi_0539 7a8b267f991aed7020790d89a394c6de 409 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 13 395 9.3E-92 T 26-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase smi_0539 7a8b267f991aed7020790d89a394c6de 409 PANTHER PTHR30244:SF3 1 402 1.6E-199 T 26-04-2016 smi_0539 7a8b267f991aed7020790d89a394c6de 409 PIRSF PIRSF000390 2 402 9.0E-89 T 26-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase smi_0539 7a8b267f991aed7020790d89a394c6de 409 Gene3D G3DSA:3.40.640.10 5 273 1.0E-83 T 26-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 smi_0820 6748770afe96826210ac8f1108c090dd 157 PANTHER PTHR36834:SF1 8 154 9.5E-36 T 26-04-2016 smi_0820 6748770afe96826210ac8f1108c090dd 157 Pfam PF04892 VanZ like family 15 151 5.3E-22 T 26-04-2016 IPR006976 VanZ-like smi_0820 6748770afe96826210ac8f1108c090dd 157 PANTHER PTHR36834 8 154 9.5E-36 T 26-04-2016 smi_1530 a9a13393ff61cec7914c3a9fbbe6fc34 182 PANTHER PTHR30543:SF6 1 182 7.7E-52 T 26-04-2016 smi_1530 a9a13393ff61cec7914c3a9fbbe6fc34 182 Pfam PF03358 NADPH-dependent FMN reductase 4 144 5.4E-27 T 26-04-2016 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 smi_1530 a9a13393ff61cec7914c3a9fbbe6fc34 182 Gene3D G3DSA:3.40.50.360 1 181 1.5E-39 T 26-04-2016 IPR029039 Flavoprotein-like domain smi_1530 a9a13393ff61cec7914c3a9fbbe6fc34 182 PANTHER PTHR30543 1 182 7.7E-52 T 26-04-2016 smi_1530 a9a13393ff61cec7914c3a9fbbe6fc34 182 SUPERFAMILY SSF52218 3 178 1.02E-33 T 26-04-2016 IPR029039 Flavoprotein-like domain smi_0049 02309062aca05e9b0645a3f3ec1a323a 145 Gene3D G3DSA:3.40.50.720 9 141 1.3E-43 T 26-04-2016 IPR016040 NAD(P)-binding domain smi_0049 02309062aca05e9b0645a3f3ec1a323a 145 Pfam PF13380 CoA binding domain 21 138 6.3E-33 T 26-04-2016 IPR003781 CoA-binding GO:0048037 smi_0049 02309062aca05e9b0645a3f3ec1a323a 145 SMART SM00881 17 111 2.2E-20 T 26-04-2016 IPR003781 CoA-binding GO:0048037 smi_0049 02309062aca05e9b0645a3f3ec1a323a 145 SUPERFAMILY SSF51735 12 141 3.33E-37 T 26-04-2016 IPR016040 NAD(P)-binding domain smi_0049 02309062aca05e9b0645a3f3ec1a323a 145 PANTHER PTHR33303 5 142 1.0E-47 T 26-04-2016 smi_0385 b66c323249ce8d4f10d9eb61dc73e52c 131 Gene3D G3DSA:1.10.150.20 70 125 1.5E-5 T 26-04-2016 smi_0385 b66c323249ce8d4f10d9eb61dc73e52c 131 SUPERFAMILY SSF47794 77 126 1.26E-7 T 26-04-2016 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 smi_1266 b1b3a085d59eefe5e28aaf3e164d9dae 109 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 3 108 15.907 T 26-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 smi_1266 b1b3a085d59eefe5e28aaf3e164d9dae 109 PANTHER PTHR28259 1 109 7.5E-31 T 26-04-2016 smi_1266 b1b3a085d59eefe5e28aaf3e164d9dae 109 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 5 106 3.3E-22 T 26-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 smi_1761 4babbe40846a12cdcc74734cfffa3e70 535 PANTHER PTHR10357 439 502 8.4E-238 T 26-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 smi_1761 4babbe40846a12cdcc74734cfffa3e70 535 PANTHER PTHR10357 1 379 8.4E-238 T 26-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 smi_1761 4babbe40846a12cdcc74734cfffa3e70 535 PANTHER PTHR10357 395 407 8.4E-238 T 26-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 smi_1761 4babbe40846a12cdcc74734cfffa3e70 535 Pfam PF16657 Maltogenic Amylase, C-terminal domain 464 517 6.9E-8 T 26-04-2016 IPR032091 Maltogenic Amylase, C-terminal smi_1761 4babbe40846a12cdcc74734cfffa3e70 535 PANTHER PTHR10357:SF142 439 502 8.4E-238 T 26-04-2016 smi_1761 4babbe40846a12cdcc74734cfffa3e70 535 PANTHER PTHR10357:SF142 1 379 8.4E-238 T 26-04-2016 smi_1761 4babbe40846a12cdcc74734cfffa3e70 535 PANTHER PTHR10357:SF142 395 407 8.4E-238 T 26-04-2016 smi_1761 4babbe40846a12cdcc74734cfffa3e70 535 Gene3D G3DSA:2.60.40.1180 468 534 1.0E-13 T 26-04-2016 IPR013780 Glycosyl hydrolase, all-beta smi_1761 4babbe40846a12cdcc74734cfffa3e70 535 SUPERFAMILY SSF51445 4 460 4.99E-149 T 26-04-2016 IPR017853 Glycoside hydrolase superfamily smi_1761 4babbe40846a12cdcc74734cfffa3e70 535 SMART SM00642 13 402 1.9E-153 T 26-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 smi_1761 4babbe40846a12cdcc74734cfffa3e70 535 SUPERFAMILY SSF51011 464 532 3.17E-11 T 26-04-2016 smi_1761 4babbe40846a12cdcc74734cfffa3e70 535 Gene3D G3DSA:3.20.20.80 170 461 4.3E-120 T 26-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 smi_1761 4babbe40846a12cdcc74734cfffa3e70 535 Gene3D G3DSA:3.20.20.80 2 104 4.3E-120 T 26-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 smi_1761 4babbe40846a12cdcc74734cfffa3e70 535 Gene3D G3DSA:3.90.400.10 105 169 4.5E-29 T 26-04-2016 smi_1761 4babbe40846a12cdcc74734cfffa3e70 535 Pfam PF00128 Alpha amylase, catalytic domain 28 359 2.3E-122 T 26-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 smi_0177 ca5388fc9c32f061f42d02c083fb95d7 243 PRINTS PR00114 Serine/threonine phosphatase family signature 3 30 5.4E-5 T 26-04-2016 IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase GO:0016787 KEGG: 04660+3.1.3.16 smi_0177 ca5388fc9c32f061f42d02c083fb95d7 243 PRINTS PR00114 Serine/threonine phosphatase family signature 33 60 5.4E-5 T 26-04-2016 IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase GO:0016787 KEGG: 04660+3.1.3.16 smi_0177 ca5388fc9c32f061f42d02c083fb95d7 243 PANTHER PTHR24032:SF31 113 159 4.4E-15 T 26-04-2016 smi_0177 ca5388fc9c32f061f42d02c083fb95d7 243 PANTHER PTHR24032:SF31 1 84 4.4E-15 T 26-04-2016 smi_0177 ca5388fc9c32f061f42d02c083fb95d7 243 Gene3D G3DSA:3.60.21.10 2 79 4.1E-25 T 26-04-2016 IPR029052 Metallo-dependent phosphatase-like smi_0177 ca5388fc9c32f061f42d02c083fb95d7 243 Gene3D G3DSA:3.60.21.10 111 161 4.1E-25 T 26-04-2016 IPR029052 Metallo-dependent phosphatase-like smi_0177 ca5388fc9c32f061f42d02c083fb95d7 243 Pfam PF00149 Calcineurin-like phosphoesterase 3 169 1.6E-12 T 26-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 smi_0177 ca5388fc9c32f061f42d02c083fb95d7 243 PANTHER PTHR24032 113 159 4.4E-15 T 26-04-2016 smi_0177 ca5388fc9c32f061f42d02c083fb95d7 243 PANTHER PTHR24032 1 84 4.4E-15 T 26-04-2016 smi_0177 ca5388fc9c32f061f42d02c083fb95d7 243 SUPERFAMILY SSF56300 2 195 2.05E-30 T 26-04-2016 IPR029052 Metallo-dependent phosphatase-like smi_0026 8f2050bfd1933862fb2eba69370ce864 147 Gene3D G3DSA:2.70.40.10 9 146 6.6E-37 T 26-04-2016 IPR029054 dUTPase-like smi_0026 8f2050bfd1933862fb2eba69370ce864 147 SUPERFAMILY SSF51283 12 146 2.75E-34 T 26-04-2016 IPR029054 dUTPase-like smi_0026 8f2050bfd1933862fb2eba69370ce864 147 PANTHER PTHR11241 18 146 3.1E-25 T 26-04-2016 smi_0026 8f2050bfd1933862fb2eba69370ce864 147 Pfam PF00692 dUTPase 18 128 3.7E-14 T 26-04-2016 IPR008180 Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase GO:0016787|GO:0046080 smi_1058 578605021d400e3a1faabe997957b9e7 450 PANTHER PTHR11206:SF153 3 445 2.1E-201 T 26-04-2016 smi_1058 578605021d400e3a1faabe997957b9e7 450 PIRSF PIRSF006603 11 449 1.4E-68 T 26-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 smi_1058 578605021d400e3a1faabe997957b9e7 450 TIGRFAM TIGR00797 matE: MATE efflux family protein 20 420 4.2E-82 T 26-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 smi_1058 578605021d400e3a1faabe997957b9e7 450 Pfam PF01554 MatE 20 180 1.7E-28 T 26-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 smi_1058 578605021d400e3a1faabe997957b9e7 450 Pfam PF01554 MatE 246 406 5.4E-31 T 26-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 smi_1058 578605021d400e3a1faabe997957b9e7 450 PANTHER PTHR11206 3 445 2.1E-201 T 26-04-2016 smi_0878 a59d6f7fec46c833fd56071723f3b411 236 Gene3D G3DSA:3.40.50.880 1 216 9.5E-47 T 26-04-2016 IPR029062 Class I glutamine amidotransferase-like smi_0878 a59d6f7fec46c833fd56071723f3b411 236 SUPERFAMILY SSF52317 14 202 1.42E-34 T 26-04-2016 IPR029062 Class I glutamine amidotransferase-like smi_0878 a59d6f7fec46c833fd56071723f3b411 236 PANTHER PTHR11922:SF11 24 205 1.4E-35 T 26-04-2016 smi_0878 a59d6f7fec46c833fd56071723f3b411 236 Pfam PF00117 Glutamine amidotransferase class-I 26 185 1.1E-14 T 26-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 smi_0878 a59d6f7fec46c833fd56071723f3b411 236 PANTHER PTHR11922 24 205 1.4E-35 T 26-04-2016 smi_2067 fb3fa0ed559a913a0bc74f2d70882083 279 Pfam PF00005 ABC transporter 23 174 4.1E-30 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 smi_2067 fb3fa0ed559a913a0bc74f2d70882083 279 PANTHER PTHR24220 4 244 6.6E-99 T 26-04-2016 smi_2067 fb3fa0ed559a913a0bc74f2d70882083 279 PANTHER PTHR24220:SF66 4 244 6.6E-99 T 26-04-2016 smi_2067 fb3fa0ed559a913a0bc74f2d70882083 279 Gene3D G3DSA:3.40.50.300 3 235 6.0E-67 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_2067 fb3fa0ed559a913a0bc74f2d70882083 279 TIGRFAM TIGR04521 ECF_ATPase_2: energy-coupling factor transporter ATPase 3 278 8.6E-119 T 26-04-2016 IPR030946 Energy-coupling factor transporter ATP-binding protein EcfA2 smi_2067 fb3fa0ed559a913a0bc74f2d70882083 279 SMART SM00382 32 222 7.2E-8 T 26-04-2016 IPR003593 AAA+ ATPase domain smi_2067 fb3fa0ed559a913a0bc74f2d70882083 279 SUPERFAMILY SSF52540 1 235 3.19E-59 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_2067 fb3fa0ed559a913a0bc74f2d70882083 279 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 26-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 smi_1213 e6726e4d46458aea69bc4ace0b351d21 259 SUPERFAMILY SSF55821 222 234 3.66E-22 T 26-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain smi_1213 e6726e4d46458aea69bc4ace0b351d21 259 SUPERFAMILY SSF55821 6 195 3.66E-22 T 26-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain smi_1213 e6726e4d46458aea69bc4ace0b351d21 259 Gene3D G3DSA:3.90.870.10 13 185 6.2E-22 T 26-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain smi_1213 e6726e4d46458aea69bc4ace0b351d21 259 Pfam PF01300 Telomere recombination 22 88 2.7E-5 T 26-04-2016 IPR006070 YrdC-like domain GO:0003725 smi_1180 f68bb646959b03d4bca235dab32696bf 298 PANTHER PTHR11079 33 297 5.3E-89 T 26-04-2016 smi_1180 f68bb646959b03d4bca235dab32696bf 298 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 127 141 - T 26-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 smi_1180 f68bb646959b03d4bca235dab32696bf 298 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 23 293 3.5E-72 T 26-04-2016 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 smi_1180 f68bb646959b03d4bca235dab32696bf 298 SUPERFAMILY SSF55120 70 295 1.58E-70 T 26-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 smi_1180 f68bb646959b03d4bca235dab32696bf 298 PANTHER PTHR11079:SF73 33 297 5.3E-89 T 26-04-2016 smi_1180 f68bb646959b03d4bca235dab32696bf 298 Pfam PF00849 RNA pseudouridylate synthase 84 236 1.2E-32 T 26-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 smi_0918 b76d3f777b4da438241af5c25c688668 142 PANTHER PTHR10093 1 142 1.2E-41 T 26-04-2016 smi_0918 b76d3f777b4da438241af5c25c688668 142 Pfam PF01592 NifU-like N terminal domain 10 128 1.0E-25 T 26-04-2016 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 smi_0918 b76d3f777b4da438241af5c25c688668 142 Gene3D G3DSA:3.90.1010.10 9 141 1.9E-39 T 26-04-2016 smi_0918 b76d3f777b4da438241af5c25c688668 142 SUPERFAMILY SSF82649 2 142 1.75E-45 T 26-04-2016 smi_0918 b76d3f777b4da438241af5c25c688668 142 TIGRFAM TIGR01994 SUF_scaf_2: SUF system FeS assembly protein, NifU family 6 140 6.8E-55 T 26-04-2016 smi_0335 1a52bf24ebf4b0576e09378c2e2b14c6 153 PANTHER PTHR11911 22 151 1.6E-50 T 26-04-2016 smi_0335 1a52bf24ebf4b0576e09378c2e2b14c6 153 Pfam PF00571 CBS domain 85 137 5.4E-9 T 26-04-2016 IPR000644 CBS domain smi_0335 1a52bf24ebf4b0576e09378c2e2b14c6 153 Pfam PF00571 CBS domain 41 71 1.9E-4 T 26-04-2016 IPR000644 CBS domain smi_0335 1a52bf24ebf4b0576e09378c2e2b14c6 153 Gene3D G3DSA:3.10.580.10 15 152 4.5E-31 T 26-04-2016 smi_0335 1a52bf24ebf4b0576e09378c2e2b14c6 153 SMART SM00116 23 71 20.0 T 26-04-2016 IPR000644 CBS domain smi_0335 1a52bf24ebf4b0576e09378c2e2b14c6 153 SMART SM00116 92 138 2.7E-5 T 26-04-2016 IPR000644 CBS domain smi_0335 1a52bf24ebf4b0576e09378c2e2b14c6 153 SUPERFAMILY SSF54631 17 137 6.57E-25 T 26-04-2016 smi_0335 1a52bf24ebf4b0576e09378c2e2b14c6 153 PANTHER PTHR11911:SF103 22 151 1.6E-50 T 26-04-2016 smi_0762 5c22db0fa7a79fd0c94c976678e315f2 380 Pfam PF04536 Acid phosphatase of thylakoid lumen protein 33 149 2.8E-23 T 26-04-2016 IPR007621 TPM domain smi_0762 5c22db0fa7a79fd0c94c976678e315f2 380 PANTHER PTHR30373 4 278 6.1E-17 T 26-04-2016 smi_0762 5c22db0fa7a79fd0c94c976678e315f2 380 PANTHER PTHR30373 314 380 6.1E-17 T 26-04-2016 smi_0719 18134e7698bd1a9c0bfc3fd3a55ecc46 129 Pfam PF12732 YtxH-like protein 5 75 1.1E-12 T 26-04-2016 IPR024623 Uncharacterised protein family YtxH smi_0223 7c9c69fd07b8d97169a59987b427b22b 287 Pfam PF01261 Xylose isomerase-like TIM barrel 23 233 2.3E-40 T 26-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain smi_0223 7c9c69fd07b8d97169a59987b427b22b 287 Gene3D G3DSA:3.20.20.150 15 274 6.3E-48 T 26-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain smi_0223 7c9c69fd07b8d97169a59987b427b22b 287 TIGRFAM TIGR00542 hxl6Piso_put: putative hexulose-6-phosphate isomerase 4 286 5.8E-113 T 26-04-2016 IPR004560 L-ribulose-5-phosphate 3-epimerase GO:0005975|GO:0016861 KEGG: 00053+5.1.3.22|MetaCyc: PWY-6961|UniPathway: UPA00263 smi_0223 7c9c69fd07b8d97169a59987b427b22b 287 SUPERFAMILY SSF51658 13 277 1.83E-56 T 26-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain smi_0223 7c9c69fd07b8d97169a59987b427b22b 287 PANTHER PTHR12110:SF17 1 286 1.3E-108 T 26-04-2016 smi_0223 7c9c69fd07b8d97169a59987b427b22b 287 PANTHER PTHR12110 1 286 1.3E-108 T 26-04-2016 smi_0983 32370e3d8636c5d38488defbfe20d09d 312 Hamap MF_01145 Foldase protein PrsA [prsA]. 4 299 20.677 T 26-04-2016 IPR023059 Foldase protein PrsA GO:0003755 smi_0983 32370e3d8636c5d38488defbfe20d09d 312 Pfam PF13145 PPIC-type PPIASE domain 131 252 2.0E-13 T 26-04-2016 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 smi_0983 32370e3d8636c5d38488defbfe20d09d 312 PANTHER PTHR10657:SF11 1 298 2.8E-34 T 26-04-2016 smi_0983 32370e3d8636c5d38488defbfe20d09d 312 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 24 121 1.3E-4 T 26-04-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 smi_0983 32370e3d8636c5d38488defbfe20d09d 312 SUPERFAMILY SSF109998 33 173 1.28E-17 T 26-04-2016 IPR027304 Trigger factor/SurA domain smi_0983 32370e3d8636c5d38488defbfe20d09d 312 SUPERFAMILY SSF54534 129 239 8.5E-18 T 26-04-2016 smi_0983 32370e3d8636c5d38488defbfe20d09d 312 PANTHER PTHR10657 1 298 2.8E-34 T 26-04-2016 smi_0983 32370e3d8636c5d38488defbfe20d09d 312 Gene3D G3DSA:3.10.50.40 144 265 2.3E-18 T 26-04-2016 smi_0114 1539d4008041d47d3426c235f73817d9 113 Pfam PF01883 Domain of unknown function DUF59 16 89 1.1E-8 T 26-04-2016 IPR002744 Domain of unknown function DUF59 smi_0114 1539d4008041d47d3426c235f73817d9 113 SUPERFAMILY SSF117916 14 109 6.54E-24 T 26-04-2016 smi_1625 e0c95e32cf364d9b980ee280f05efb26 311 Gene3D G3DSA:3.40.50.170 3 205 1.0E-60 T 26-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 smi_1625 e0c95e32cf364d9b980ee280f05efb26 311 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 3 304 1.9E-92 T 26-04-2016 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 smi_1625 e0c95e32cf364d9b980ee280f05efb26 311 Gene3D G3DSA:3.10.25.10 208 310 6.8E-33 T 26-04-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 smi_1625 e0c95e32cf364d9b980ee280f05efb26 311 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 133 156 - T 26-04-2016 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 smi_1625 e0c95e32cf364d9b980ee280f05efb26 311 Pfam PF02911 Formyl transferase, C-terminal domain 204 299 4.1E-29 T 26-04-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 smi_1625 e0c95e32cf364d9b980ee280f05efb26 311 Pfam PF00551 Formyl transferase 4 179 1.0E-34 T 26-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 smi_1625 e0c95e32cf364d9b980ee280f05efb26 311 SUPERFAMILY SSF50486 205 304 5.36E-31 T 26-04-2016 IPR011034 Formyl transferase, C-terminal-like GO:0003824 smi_1625 e0c95e32cf364d9b980ee280f05efb26 311 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 2 302 32.852 T 26-04-2016 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 smi_1625 e0c95e32cf364d9b980ee280f05efb26 311 SUPERFAMILY SSF53328 3 203 2.35E-56 T 26-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 smi_1625 e0c95e32cf364d9b980ee280f05efb26 311 PANTHER PTHR11138 3 298 1.0E-104 T 26-04-2016 smi_0237 d5c058630f2cf083ae0ad001b166c0d3 58 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 2 51 4.2E-9 T 26-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 smi_0237 d5c058630f2cf083ae0ad001b166c0d3 58 Gene3D G3DSA:1.20.5.1030 1 51 9.8E-11 T 26-04-2016 smi_0237 d5c058630f2cf083ae0ad001b166c0d3 58 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 2 50 3.3E-10 T 26-04-2016 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 smi_0569 27285eafbb9e5b81149f558e2bf8a5f3 163 SUPERFAMILY SSF55620 25 133 2.45E-28 T 26-04-2016 smi_0569 27285eafbb9e5b81149f558e2bf8a5f3 163 Hamap MF_00818 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 163 69.627 T 26-04-2016 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 smi_0569 27285eafbb9e5b81149f558e2bf8a5f3 163 PANTHER PTHR34354 1 149 2.4E-65 T 26-04-2016 smi_0569 27285eafbb9e5b81149f558e2bf8a5f3 163 Gene3D G3DSA:3.30.1130.10 16 148 4.5E-56 T 26-04-2016 smi_0569 27285eafbb9e5b81149f558e2bf8a5f3 163 Pfam PF14489 QueF-like protein 60 138 5.2E-35 T 26-04-2016 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 smi_0569 27285eafbb9e5b81149f558e2bf8a5f3 163 PIRSF PIRSF027377 5 145 4.4E-62 T 26-04-2016 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 smi_0569 27285eafbb9e5b81149f558e2bf8a5f3 163 PANTHER PTHR34354:SF1 1 149 2.4E-65 T 26-04-2016 smi_0569 27285eafbb9e5b81149f558e2bf8a5f3 163 TIGRFAM TIGR03139 QueF-II: 7-cyano-7-deazaguanine reductase 25 137 8.7E-54 T 26-04-2016 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 smi_1318 46794f2f47204974eda1aa08eac7e0bd 728 Gene3D G3DSA:3.40.50.300 256 406 3.7E-24 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1318 46794f2f47204974eda1aa08eac7e0bd 728 Gene3D G3DSA:3.40.50.300 160 161 3.7E-24 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1318 46794f2f47204974eda1aa08eac7e0bd 728 Gene3D G3DSA:3.40.50.300 1 115 3.7E-24 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1318 46794f2f47204974eda1aa08eac7e0bd 728 Gene3D G3DSA:3.40.50.300 201 202 3.7E-24 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1318 46794f2f47204974eda1aa08eac7e0bd 728 Pfam PF13175 AAA ATPase domain 1 392 1.3E-34 T 26-04-2016 smi_1318 46794f2f47204974eda1aa08eac7e0bd 728 SUPERFAMILY SSF52540 229 409 1.73E-19 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1318 46794f2f47204974eda1aa08eac7e0bd 728 SUPERFAMILY SSF52540 1 179 1.73E-19 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1963 83dbbf9f06c5a3720f5ef1f44875b82e 373 PANTHER PTHR11933:SF10 1 366 1.4E-213 T 26-04-2016 smi_1963 83dbbf9f06c5a3720f5ef1f44875b82e 373 Pfam PF03054 tRNA methyl transferase 8 360 1.6E-146 T 26-04-2016 smi_1963 83dbbf9f06c5a3720f5ef1f44875b82e 373 Gene3D G3DSA:2.30.30.280 214 281 3.2E-32 T 26-04-2016 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 smi_1963 83dbbf9f06c5a3720f5ef1f44875b82e 373 PANTHER PTHR11933 1 366 1.4E-213 T 26-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 smi_1963 83dbbf9f06c5a3720f5ef1f44875b82e 373 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 8 360 4.9E-138 T 26-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 smi_1963 83dbbf9f06c5a3720f5ef1f44875b82e 373 Gene3D G3DSA:3.40.50.620 4 212 2.8E-105 T 26-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold smi_1963 83dbbf9f06c5a3720f5ef1f44875b82e 373 SUPERFAMILY SSF52402 5 244 1.43E-58 T 26-04-2016 smi_1963 83dbbf9f06c5a3720f5ef1f44875b82e 373 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 7 361 41.612 T 26-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 smi_1963 83dbbf9f06c5a3720f5ef1f44875b82e 373 Gene3D G3DSA:2.40.30.10 283 371 3.0E-33 T 26-04-2016 smi_1483 a7df1f7cb10bfd5ce0b97e87bbc496c0 194 Gene3D G3DSA:3.40.50.10360 11 193 9.1E-87 T 26-04-2016 IPR006340 Protein of unknown function DUF436 smi_1483 a7df1f7cb10bfd5ce0b97e87bbc496c0 194 Pfam PF04260 Protein of unknown function (DUF436) 17 186 1.8E-74 T 26-04-2016 IPR006340 Protein of unknown function DUF436 smi_1483 a7df1f7cb10bfd5ce0b97e87bbc496c0 194 PIRSF PIRSF007510 8 189 2.4E-87 T 26-04-2016 IPR006340 Protein of unknown function DUF436 smi_1483 a7df1f7cb10bfd5ce0b97e87bbc496c0 194 Hamap MF_00800 UPF0340 protein . 1 194 96.825 T 26-04-2016 IPR006340 Protein of unknown function DUF436 smi_1483 a7df1f7cb10bfd5ce0b97e87bbc496c0 194 ProDom PD102102 UPF0340 3D-STRUCTURE YWLG SMU.87 STU1894 BT9727_4999 TRANSFERASE TTE0860 SPY1898/M5005_SPY1614 TT1679 19 193 1.0E-88 T 26-04-2016 IPR006340 Protein of unknown function DUF436 smi_1483 a7df1f7cb10bfd5ce0b97e87bbc496c0 194 TIGRFAM TIGR01440 TIGR01440: TIGR01440 family protein 15 186 1.2E-87 T 26-04-2016 IPR006340 Protein of unknown function DUF436 smi_1483 a7df1f7cb10bfd5ce0b97e87bbc496c0 194 SUPERFAMILY SSF110710 11 193 3.14E-79 T 26-04-2016 smi_0932 b22473b9873ab69cea684254cd700e03 295 Pfam PF00849 RNA pseudouridylate synthase 82 235 8.2E-36 T 26-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 smi_0932 b22473b9873ab69cea684254cd700e03 295 SUPERFAMILY SSF55120 67 294 2.67E-80 T 26-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 smi_0932 b22473b9873ab69cea684254cd700e03 295 Pfam PF01479 S4 domain 11 55 2.4E-10 T 26-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 smi_0932 b22473b9873ab69cea684254cd700e03 295 PANTHER PTHR11079:SF71 1 295 5.9E-133 T 26-04-2016 smi_0932 b22473b9873ab69cea684254cd700e03 295 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 10 294 9.9E-98 T 26-04-2016 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 smi_0932 b22473b9873ab69cea684254cd700e03 295 SMART SM00363 10 73 4.1E-11 T 26-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 smi_0932 b22473b9873ab69cea684254cd700e03 295 SUPERFAMILY SSF55174 9 95 2.35E-14 T 26-04-2016 smi_0932 b22473b9873ab69cea684254cd700e03 295 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 128 142 - T 26-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 smi_0932 b22473b9873ab69cea684254cd700e03 295 Gene3D G3DSA:3.10.290.10 9 58 4.9E-17 T 26-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 smi_0932 b22473b9873ab69cea684254cd700e03 295 PANTHER PTHR11079 1 295 5.9E-133 T 26-04-2016 smi_0537 7688f62adee0b0ac5b4107ea9291413b 580 SUPERFAMILY SSF52540 336 575 1.49E-86 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0537 7688f62adee0b0ac5b4107ea9291413b 580 SUPERFAMILY SSF90123 6 326 8.37E-71 T 26-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 smi_0537 7688f62adee0b0ac5b4107ea9291413b 580 SMART SM00382 366 557 4.4E-13 T 26-04-2016 IPR003593 AAA+ ATPase domain smi_0537 7688f62adee0b0ac5b4107ea9291413b 580 Gene3D G3DSA:3.40.50.300 340 569 4.3E-76 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0537 7688f62adee0b0ac5b4107ea9291413b 580 Pfam PF00664 ABC transporter transmembrane region 26 295 1.8E-39 T 26-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 smi_0537 7688f62adee0b0ac5b4107ea9291413b 580 PANTHER PTHR24221:SF258 5 579 1.1E-233 T 26-04-2016 smi_0537 7688f62adee0b0ac5b4107ea9291413b 580 Pfam PF00005 ABC transporter 357 505 2.7E-32 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 smi_0537 7688f62adee0b0ac5b4107ea9291413b 580 PANTHER PTHR24221 5 579 1.1E-233 T 26-04-2016 smi_0537 7688f62adee0b0ac5b4107ea9291413b 580 Gene3D G3DSA:1.20.1560.10 12 326 1.0E-73 T 26-04-2016 smi_0424 80416016f0e6682f19faad4eb7ac62ca 265 SMART SM00943 8 160 1.2E-29 T 26-04-2016 IPR015330 DNA primase/polymerase, bifunctional, N-terminal smi_0424 80416016f0e6682f19faad4eb7ac62ca 265 Pfam PF09250 Bifunctional DNA primase/polymerase, N-terminal 8 158 1.1E-27 T 26-04-2016 IPR015330 DNA primase/polymerase, bifunctional, N-terminal smi_0424 80416016f0e6682f19faad4eb7ac62ca 265 SMART SM00942 195 260 4.8E-14 T 26-04-2016 IPR014820 Primase, C-terminal 1 smi_0424 80416016f0e6682f19faad4eb7ac62ca 265 SUPERFAMILY SSF56747 2 177 4.58E-44 T 26-04-2016 smi_0424 80416016f0e6682f19faad4eb7ac62ca 265 Pfam PF08708 Primase C terminal 1 (PriCT-1) 202 259 1.8E-7 T 26-04-2016 IPR014820 Primase, C-terminal 1 smi_0716 2d1095939caa15ed66c136343d74f0c4 310 SUPERFAMILY SSF53795 132 293 5.19E-36 T 26-04-2016 smi_0716 2d1095939caa15ed66c136343d74f0c4 310 TIGRFAM TIGR00679 hpr-ser: HPr(Ser) kinase/phosphatase 4 297 7.1E-106 T 26-04-2016 IPR003755 HPr(Ser) kinase/phosphorylase GO:0000155|GO:0000160|GO:0005524|GO:0006109 smi_0716 2d1095939caa15ed66c136343d74f0c4 310 Pfam PF02603 HPr Serine kinase N terminus 3 127 6.2E-39 T 26-04-2016 IPR011126 HPr(Ser) kinase/phosphorylase, N-terminal GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 smi_0716 2d1095939caa15ed66c136343d74f0c4 310 SUPERFAMILY SSF75138 2 131 7.72E-40 T 26-04-2016 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like smi_0716 2d1095939caa15ed66c136343d74f0c4 310 Gene3D G3DSA:3.40.1390.20 3 131 6.6E-47 T 26-04-2016 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like smi_0716 2d1095939caa15ed66c136343d74f0c4 310 Pfam PF07475 HPr Serine kinase C-terminal domain 130 294 3.4E-70 T 26-04-2016 IPR011104 HPr kinase/phosphorylase, C-terminal GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 smi_0716 2d1095939caa15ed66c136343d74f0c4 310 Hamap MF_01249 HPr kinase/phosphorylase [hprK]. 2 306 39.822 T 26-04-2016 IPR003755 HPr(Ser) kinase/phosphorylase GO:0000155|GO:0000160|GO:0005524|GO:0006109 smi_0716 2d1095939caa15ed66c136343d74f0c4 310 PANTHER PTHR30305 1 309 1.3E-134 T 26-04-2016 smi_0716 2d1095939caa15ed66c136343d74f0c4 310 Gene3D G3DSA:3.40.50.300 133 301 2.1E-66 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0716 2d1095939caa15ed66c136343d74f0c4 310 PANTHER PTHR30305:SF1 1 309 1.3E-134 T 26-04-2016 smi_1930 450b1288fdf18d32c4f451b1b6e0d381 197 SUPERFAMILY SSF46929 150 195 5.23E-9 T 26-04-2016 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 smi_1930 450b1288fdf18d32c4f451b1b6e0d381 197 Gene3D G3DSA:1.10.8.10 150 195 2.1E-11 T 26-04-2016 smi_1930 450b1288fdf18d32c4f451b1b6e0d381 197 SUPERFAMILY SSF50249 1 62 1.43E-17 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold smi_1930 450b1288fdf18d32c4f451b1b6e0d381 197 Gene3D G3DSA:1.10.150.20 66 131 6.5E-26 T 26-04-2016 smi_1930 450b1288fdf18d32c4f451b1b6e0d381 197 Pfam PF01330 RuvA N terminal domain 1 61 9.3E-21 T 26-04-2016 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 smi_1930 450b1288fdf18d32c4f451b1b6e0d381 197 SUPERFAMILY SSF47781 65 131 3.02E-18 T 26-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 smi_1930 450b1288fdf18d32c4f451b1b6e0d381 197 PANTHER PTHR33796 2 197 3.6E-71 T 26-04-2016 smi_1930 450b1288fdf18d32c4f451b1b6e0d381 197 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 196 30.33 T 26-04-2016 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 smi_1930 450b1288fdf18d32c4f451b1b6e0d381 197 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 196 8.7E-49 T 26-04-2016 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 smi_1930 450b1288fdf18d32c4f451b1b6e0d381 197 Pfam PF14520 Helix-hairpin-helix domain 71 127 2.8E-12 T 26-04-2016 smi_1930 450b1288fdf18d32c4f451b1b6e0d381 197 Pfam PF07499 RuvA, C-terminal domain 153 194 2.9E-7 T 26-04-2016 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 smi_1930 450b1288fdf18d32c4f451b1b6e0d381 197 Gene3D G3DSA:2.40.50.140 1 64 3.1E-24 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold smi_1930 450b1288fdf18d32c4f451b1b6e0d381 197 SMART SM00278 107 126 88.0 T 26-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 smi_1930 450b1288fdf18d32c4f451b1b6e0d381 197 SMART SM00278 72 91 3.1 T 26-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 smi_1390 25086b17398e9eb2c9e82356e4ece031 458 Gene3D G3DSA:3.50.50.60 112 328 2.3E-47 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 smi_1390 25086b17398e9eb2c9e82356e4ece031 458 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 319 2.4E-67 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 smi_1390 25086b17398e9eb2c9e82356e4ece031 458 Gene3D G3DSA:3.50.50.60 2 111 6.4E-15 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 smi_1390 25086b17398e9eb2c9e82356e4ece031 458 PANTHER PTHR22912 3 147 1.6E-243 T 26-04-2016 smi_1390 25086b17398e9eb2c9e82356e4ece031 458 PANTHER PTHR22912 163 455 1.6E-243 T 26-04-2016 smi_1390 25086b17398e9eb2c9e82356e4ece031 458 SUPERFAMILY SSF51905 2 329 1.84E-38 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 smi_1390 25086b17398e9eb2c9e82356e4ece031 458 PANTHER PTHR22912:SF147 3 147 1.6E-243 T 26-04-2016 smi_1390 25086b17398e9eb2c9e82356e4ece031 458 PANTHER PTHR22912:SF147 163 455 1.6E-243 T 26-04-2016 smi_1390 25086b17398e9eb2c9e82356e4ece031 458 SUPERFAMILY SSF55424 335 456 5.15E-24 T 26-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 smi_1390 25086b17398e9eb2c9e82356e4ece031 458 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 289 296 1.4E-7 T 26-04-2016 smi_1390 25086b17398e9eb2c9e82356e4ece031 458 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 400 415 1.4E-7 T 26-04-2016 smi_1390 25086b17398e9eb2c9e82356e4ece031 458 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 249 263 1.4E-7 T 26-04-2016 smi_1390 25086b17398e9eb2c9e82356e4ece031 458 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 107 116 1.4E-7 T 26-04-2016 smi_1390 25086b17398e9eb2c9e82356e4ece031 458 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 274 296 9.2E-26 T 26-04-2016 smi_1390 25086b17398e9eb2c9e82356e4ece031 458 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 9.2E-26 T 26-04-2016 smi_1390 25086b17398e9eb2c9e82356e4ece031 458 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 248 264 9.2E-26 T 26-04-2016 smi_1390 25086b17398e9eb2c9e82356e4ece031 458 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 164 182 9.2E-26 T 26-04-2016 smi_1390 25086b17398e9eb2c9e82356e4ece031 458 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 104 122 9.2E-26 T 26-04-2016 smi_1390 25086b17398e9eb2c9e82356e4ece031 458 Gene3D G3DSA:3.30.390.30 348 457 1.1E-26 T 26-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 smi_1390 25086b17398e9eb2c9e82356e4ece031 458 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 349 442 3.7E-11 T 26-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 smi_0879 e4fe9ab6f2b1693f149895af96f31626 236 PANTHER PTHR21234:SF8 1 236 7.8E-67 T 26-04-2016 smi_0879 e4fe9ab6f2b1693f149895af96f31626 236 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 61 76 - T 26-04-2016 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 smi_0879 e4fe9ab6f2b1693f149895af96f31626 236 Hamap MF_01627 Purine nucleoside phosphorylase DeoD-type [deoD]. 1 235 42.551 T 26-04-2016 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 smi_0879 e4fe9ab6f2b1693f149895af96f31626 236 PANTHER PTHR21234 1 236 7.8E-67 T 26-04-2016 IPR018017 Nucleoside phosphorylase smi_0879 e4fe9ab6f2b1693f149895af96f31626 236 SUPERFAMILY SSF53167 2 234 1.26E-84 T 26-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 smi_0879 e4fe9ab6f2b1693f149895af96f31626 236 Pfam PF01048 Phosphorylase superfamily 16 220 3.8E-42 T 26-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 smi_0879 e4fe9ab6f2b1693f149895af96f31626 236 Gene3D G3DSA:3.40.50.1580 9 234 3.4E-81 T 26-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 smi_0879 e4fe9ab6f2b1693f149895af96f31626 236 TIGRFAM TIGR00107 deoD: purine nucleoside phosphorylase 4 232 2.5E-87 T 26-04-2016 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 smi_1232 ab4b09c7e63865eb4230ed23e5d971ba 444 TIGRFAM TIGR01197 nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 27 412 5.5E-105 T 26-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 smi_1232 ab4b09c7e63865eb4230ed23e5d971ba 444 Pfam PF01566 Natural resistance-associated macrophage protein 48 418 1.4E-109 T 26-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 smi_1232 ab4b09c7e63865eb4230ed23e5d971ba 444 PRINTS PR00447 Natural resistance-associated macrophage protein signature 107 133 1.8E-53 T 26-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 smi_1232 ab4b09c7e63865eb4230ed23e5d971ba 444 PRINTS PR00447 Natural resistance-associated macrophage protein signature 135 154 1.8E-53 T 26-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 smi_1232 ab4b09c7e63865eb4230ed23e5d971ba 444 PRINTS PR00447 Natural resistance-associated macrophage protein signature 217 240 1.8E-53 T 26-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 smi_1232 ab4b09c7e63865eb4230ed23e5d971ba 444 PRINTS PR00447 Natural resistance-associated macrophage protein signature 326 345 1.8E-53 T 26-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 smi_1232 ab4b09c7e63865eb4230ed23e5d971ba 444 PRINTS PR00447 Natural resistance-associated macrophage protein signature 354 371 1.8E-53 T 26-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 smi_1232 ab4b09c7e63865eb4230ed23e5d971ba 444 PRINTS PR00447 Natural resistance-associated macrophage protein signature 388 407 1.8E-53 T 26-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 smi_1232 ab4b09c7e63865eb4230ed23e5d971ba 444 PANTHER PTHR11706 1 444 9.0E-161 T 26-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 smi_1232 ab4b09c7e63865eb4230ed23e5d971ba 444 Hamap MF_00221 Divalent metal cation transporter MntH [mntH]. 19 444 34.812 T 26-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 smi_1232 ab4b09c7e63865eb4230ed23e5d971ba 444 PANTHER PTHR11706:SF33 1 444 9.0E-161 T 26-04-2016 smi_0896 a7def3f118066944f59ed67d32a34519 213 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 1 200 3.9E-50 T 26-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 smi_0896 a7def3f118066944f59ed67d32a34519 213 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 5 201 19.075 T 26-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 smi_0896 a7def3f118066944f59ed67d32a34519 213 PANTHER PTHR30309:SF0 1 213 2.8E-91 T 26-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 smi_0896 a7def3f118066944f59ed67d32a34519 213 SMART SM01207 8 193 2.4E-75 T 26-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 smi_0896 a7def3f118066944f59ed67d32a34519 213 Pfam PF02660 Glycerol-3-phosphate acyltransferase 9 192 5.6E-48 T 26-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 smi_0896 a7def3f118066944f59ed67d32a34519 213 PANTHER PTHR30309 1 213 2.8E-91 T 26-04-2016 smi_0813 1efbfb1b40fe3a95780327cc3a39d09f 154 SUPERFAMILY SSF143422 4 131 5.1E-48 T 26-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 smi_0813 1efbfb1b40fe3a95780327cc3a39d09f 154 Pfam PF01797 Transposase IS200 like 13 130 2.9E-39 T 26-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 smi_0813 1efbfb1b40fe3a95780327cc3a39d09f 154 PANTHER PTHR33360:SF2 3 146 9.0E-69 T 26-04-2016 smi_0813 1efbfb1b40fe3a95780327cc3a39d09f 154 PANTHER PTHR33360 3 146 9.0E-69 T 26-04-2016 smi_0813 1efbfb1b40fe3a95780327cc3a39d09f 154 SMART SM01321 12 130 3.1E-44 T 26-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 smi_0813 1efbfb1b40fe3a95780327cc3a39d09f 154 Gene3D G3DSA:3.30.70.1290 1 134 1.7E-58 T 26-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 smi_1334 0799f9883ea4df5978aa2538eeea19c3 639 Gene3D G3DSA:3.40.50.300 176 240 5.6E-4 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1334 0799f9883ea4df5978aa2538eeea19c3 639 Gene3D G3DSA:3.40.50.300 2 153 9.0E-62 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1334 0799f9883ea4df5978aa2538eeea19c3 639 Pfam PF00009 Elongation factor Tu GTP binding domain 2 237 6.5E-59 T 26-04-2016 smi_1334 0799f9883ea4df5978aa2538eeea19c3 639 SUPERFAMILY SSF50447 224 317 1.41E-14 T 26-04-2016 IPR009000 Translation protein, beta-barrel domain smi_1334 0799f9883ea4df5978aa2538eeea19c3 639 PRINTS PR01037 Tetracycline resistance protein TetO/TetQ/TetM family signature 213 235 5.2E-79 T 26-04-2016 smi_1334 0799f9883ea4df5978aa2538eeea19c3 639 PRINTS PR01037 Tetracycline resistance protein TetO/TetQ/TetM family signature 504 521 5.2E-79 T 26-04-2016 smi_1334 0799f9883ea4df5978aa2538eeea19c3 639 PRINTS PR01037 Tetracycline resistance protein TetO/TetQ/TetM family signature 267 293 5.2E-79 T 26-04-2016 smi_1334 0799f9883ea4df5978aa2538eeea19c3 639 PRINTS PR01037 Tetracycline resistance protein TetO/TetQ/TetM family signature 470 492 5.2E-79 T 26-04-2016 smi_1334 0799f9883ea4df5978aa2538eeea19c3 639 PRINTS PR01037 Tetracycline resistance protein TetO/TetQ/TetM family signature 109 132 5.2E-79 T 26-04-2016 smi_1334 0799f9883ea4df5978aa2538eeea19c3 639 PRINTS PR01037 Tetracycline resistance protein TetO/TetQ/TetM family signature 455 469 5.2E-79 T 26-04-2016 smi_1334 0799f9883ea4df5978aa2538eeea19c3 639 SUPERFAMILY SSF54980 535 618 8.15E-15 T 26-04-2016 IPR009022 Elongation factor G, III-V domain smi_1334 0799f9883ea4df5978aa2538eeea19c3 639 SUPERFAMILY SSF54980 342 418 5.4E-16 T 26-04-2016 IPR009022 Elongation factor G, III-V domain smi_1334 0799f9883ea4df5978aa2538eeea19c3 639 SMART SM00889 417 532 4.7E-15 T 26-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 smi_1334 0799f9883ea4df5978aa2538eeea19c3 639 Gene3D G3DSA:3.30.70.870 342 417 4.1E-21 T 26-04-2016 smi_1334 0799f9883ea4df5978aa2538eeea19c3 639 PRINTS PR00315 GTP-binding elongation factor signature 51 59 1.2E-17 T 26-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 smi_1334 0799f9883ea4df5978aa2538eeea19c3 639 PRINTS PR00315 GTP-binding elongation factor signature 5 18 1.2E-17 T 26-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 smi_1334 0799f9883ea4df5978aa2538eeea19c3 639 PRINTS PR00315 GTP-binding elongation factor signature 71 81 1.2E-17 T 26-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 smi_1334 0799f9883ea4df5978aa2538eeea19c3 639 PRINTS PR00315 GTP-binding elongation factor signature 123 132 1.2E-17 T 26-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 smi_1334 0799f9883ea4df5978aa2538eeea19c3 639 PRINTS PR00315 GTP-binding elongation factor signature 87 98 1.2E-17 T 26-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 smi_1334 0799f9883ea4df5978aa2538eeea19c3 639 Pfam PF00679 Elongation factor G C-terminus 534 617 2.2E-15 T 26-04-2016 IPR000640 Translation elongation factor EFG, V domain smi_1334 0799f9883ea4df5978aa2538eeea19c3 639 SUPERFAMILY SSF52540 2 236 1.89E-70 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1334 0799f9883ea4df5978aa2538eeea19c3 639 Pfam PF14492 Elongation Factor G, domain II 342 414 2.6E-13 T 26-04-2016 IPR009022 Elongation factor G, III-V domain smi_1334 0799f9883ea4df5978aa2538eeea19c3 639 SUPERFAMILY SSF54211 416 532 3.79E-22 T 26-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold smi_1334 0799f9883ea4df5978aa2538eeea19c3 639 Gene3D G3DSA:3.30.70.240 537 618 5.9E-12 T 26-04-2016 IPR000640 Translation elongation factor EFG, V domain smi_1334 0799f9883ea4df5978aa2538eeea19c3 639 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 44 59 - T 26-04-2016 IPR031157 Tr-type G domain, conserved site smi_1334 0799f9883ea4df5978aa2538eeea19c3 639 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 1 171 9.6E-49 T 26-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 smi_1334 0799f9883ea4df5978aa2538eeea19c3 639 Gene3D G3DSA:3.30.230.10 427 536 7.6E-30 T 26-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup smi_1334 0799f9883ea4df5978aa2538eeea19c3 639 Pfam PF03764 Elongation factor G, domain IV 416 531 6.4E-24 T 26-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 smi_1334 0799f9883ea4df5978aa2538eeea19c3 639 PANTHER PTHR23115:SF66 5 180 7.9E-104 T 26-04-2016 smi_1334 0799f9883ea4df5978aa2538eeea19c3 639 PANTHER PTHR23115:SF66 213 625 7.9E-104 T 26-04-2016 smi_1334 0799f9883ea4df5978aa2538eeea19c3 639 Gene3D G3DSA:2.40.30.10 248 332 1.9E-16 T 26-04-2016 smi_1334 0799f9883ea4df5978aa2538eeea19c3 639 PANTHER PTHR23115 5 180 7.9E-104 T 26-04-2016 smi_1334 0799f9883ea4df5978aa2538eeea19c3 639 PANTHER PTHR23115 213 625 7.9E-104 T 26-04-2016 smi_0055 6a04e277cc874f09bd0f7f19aec21136 393 SUPERFAMILY SSF69360 190 336 5.3E-6 T 26-04-2016 smi_0055 6a04e277cc874f09bd0f7f19aec21136 393 SUPERFAMILY SSF69360 22 170 2.2E-41 T 26-04-2016 smi_0055 6a04e277cc874f09bd0f7f19aec21136 393 Gene3D G3DSA:2.10.270.10 103 172 5.5E-21 T 26-04-2016 smi_0055 6a04e277cc874f09bd0f7f19aec21136 393 Gene3D G3DSA:2.10.270.10 29 102 4.2E-20 T 26-04-2016 smi_0055 6a04e277cc874f09bd0f7f19aec21136 393 Gene3D G3DSA:2.10.270.10 229 352 5.4E-5 T 26-04-2016 smi_0055 6a04e277cc874f09bd0f7f19aec21136 393 Pfam PF01473 Putative cell wall binding repeat 88 106 0.044 T 26-04-2016 IPR018337 Cell wall/choline-binding repeat smi_0055 6a04e277cc874f09bd0f7f19aec21136 393 Pfam PF01473 Putative cell wall binding repeat 128 146 4.0E-4 T 26-04-2016 IPR018337 Cell wall/choline-binding repeat smi_0055 6a04e277cc874f09bd0f7f19aec21136 393 Pfam PF01473 Putative cell wall binding repeat 108 126 6.2E-6 T 26-04-2016 IPR018337 Cell wall/choline-binding repeat smi_0055 6a04e277cc874f09bd0f7f19aec21136 393 Pfam PF01473 Putative cell wall binding repeat 48 66 9.2E-5 T 26-04-2016 IPR018337 Cell wall/choline-binding repeat smi_0055 6a04e277cc874f09bd0f7f19aec21136 393 Pfam PF01473 Putative cell wall binding repeat 68 86 0.014 T 26-04-2016 IPR018337 Cell wall/choline-binding repeat smi_1152 2e2b9bfc16de161552a79fc719235c78 282 Pfam PF10035 Uncharacterized protein conserved in bacteria (DUF2179) 220 274 1.0E-22 T 26-04-2016 IPR019264 Domain of unknown function DUF2179 smi_1152 2e2b9bfc16de161552a79fc719235c78 282 PANTHER PTHR33545:SF7 3 282 1.2E-146 T 26-04-2016 smi_1152 2e2b9bfc16de161552a79fc719235c78 282 PANTHER PTHR33545 3 282 1.2E-146 T 26-04-2016 smi_1152 2e2b9bfc16de161552a79fc719235c78 282 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 8 214 3.0E-65 T 26-04-2016 IPR003740 Uncharacterised membrane protein YitT smi_1152 2e2b9bfc16de161552a79fc719235c78 282 PIRSF PIRSF006483 1 281 1.9E-87 T 26-04-2016 IPR003740 Uncharacterised membrane protein YitT smi_1959 adc054ac554d21749fd9ad90ad9dcd69 77 ProDom PD055417 UPF0356 TRANSCRIPTIONAL REGULATOR SP0122 SH1862 BLI01669/BL01628 MW0973 LMOF2365_1049 BCE33L3734 SPYM3_1619/SPS0248 1 76 1.0E-34 T 26-04-2016 IPR009907 Protein of unknown function DUF1447 smi_1959 adc054ac554d21749fd9ad90ad9dcd69 77 Hamap MF_01553 UPF0356 protein . 1 77 20.553 T 26-04-2016 IPR009907 Protein of unknown function DUF1447 smi_1959 adc054ac554d21749fd9ad90ad9dcd69 77 PANTHER PTHR41306 2 77 2.9E-23 T 26-04-2016 IPR009907 Protein of unknown function DUF1447 smi_1959 adc054ac554d21749fd9ad90ad9dcd69 77 Pfam PF07288 Protein of unknown function (DUF1447) 2 76 1.1E-27 T 26-04-2016 IPR009907 Protein of unknown function DUF1447 smi_0742 d4d7f67870bd62b2eb25078153868743 301 Gene3D G3DSA:3.30.43.10 2 86 8.2E-30 T 26-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 smi_0742 d4d7f67870bd62b2eb25078153868743 301 PANTHER PTHR21071:SF4 1 301 2.2E-137 T 26-04-2016 smi_0742 d4d7f67870bd62b2eb25078153868743 301 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 199 297 1.8E-28 T 26-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 smi_0742 d4d7f67870bd62b2eb25078153868743 301 PANTHER PTHR21071 1 301 2.2E-137 T 26-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 smi_0742 d4d7f67870bd62b2eb25078153868743 301 SUPERFAMILY SSF56176 5 193 2.8E-48 T 26-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 smi_0742 d4d7f67870bd62b2eb25078153868743 301 Gene3D G3DSA:3.30.465.10 87 225 2.2E-51 T 26-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 smi_0742 d4d7f67870bd62b2eb25078153868743 301 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 301 96.155 T 26-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 smi_0742 d4d7f67870bd62b2eb25078153868743 301 Pfam PF01565 FAD binding domain 35 164 5.8E-27 T 26-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 smi_0742 d4d7f67870bd62b2eb25078153868743 301 SUPERFAMILY SSF56194 195 299 9.68E-38 T 26-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 smi_0742 d4d7f67870bd62b2eb25078153868743 301 Gene3D G3DSA:3.90.78.10 226 299 8.8E-33 T 26-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 smi_0742 d4d7f67870bd62b2eb25078153868743 301 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 23 298 1.4E-71 T 26-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 smi_1569 2146adb211a0fcd45621528997a0c2d1 229 Gene3D G3DSA:3.40.50.790 69 159 8.9E-44 T 26-04-2016 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich smi_1569 2146adb211a0fcd45621528997a0c2d1 229 PANTHER PTHR23105:SF5 21 229 3.2E-80 T 26-04-2016 smi_1569 2146adb211a0fcd45621528997a0c2d1 229 Gene3D G3DSA:3.30.190.20 17 68 1.7E-44 T 26-04-2016 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 smi_1569 2146adb211a0fcd45621528997a0c2d1 229 Gene3D G3DSA:3.30.190.20 161 227 1.7E-44 T 26-04-2016 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 smi_1569 2146adb211a0fcd45621528997a0c2d1 229 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 228 2.6E-102 T 26-04-2016 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 smi_1569 2146adb211a0fcd45621528997a0c2d1 229 Pfam PF00687 Ribosomal protein L1p/L10e family 32 220 8.3E-53 T 26-04-2016 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein smi_1569 2146adb211a0fcd45621528997a0c2d1 229 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 229 43.414 T 26-04-2016 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 smi_1569 2146adb211a0fcd45621528997a0c2d1 229 PIRSF PIRSF002155 1 227 1.8E-78 T 26-04-2016 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 smi_1569 2146adb211a0fcd45621528997a0c2d1 229 ProSitePatterns PS01199 Ribosomal protein L1 signature. 120 139 - T 26-04-2016 IPR023673 Ribosomal protein L1, conserved site smi_1569 2146adb211a0fcd45621528997a0c2d1 229 SUPERFAMILY SSF56808 6 227 7.19E-83 T 26-04-2016 IPR023674 Ribosomal protein L1-like smi_1569 2146adb211a0fcd45621528997a0c2d1 229 PANTHER PTHR23105 21 229 3.2E-80 T 26-04-2016 smi_2076 d13c6a96594acd550ca7ee9c204e33f0 341 SUPERFAMILY SSF52374 5 337 3.26E-79 T 26-04-2016 smi_2076 d13c6a96594acd550ca7ee9c204e33f0 341 PANTHER PTHR10055:SF6 3 341 1.6E-188 T 26-04-2016 smi_2076 d13c6a96594acd550ca7ee9c204e33f0 341 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 3 338 34.979 T 26-04-2016 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2 smi_2076 d13c6a96594acd550ca7ee9c204e33f0 341 PANTHER PTHR10055 3 341 1.6E-188 T 26-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 smi_2076 d13c6a96594acd550ca7ee9c204e33f0 341 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 3 337 1.3E-76 T 26-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 smi_2076 d13c6a96594acd550ca7ee9c204e33f0 341 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 147 168 6.9E-25 T 26-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 smi_2076 d13c6a96594acd550ca7ee9c204e33f0 341 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 69 88 6.9E-25 T 26-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 smi_2076 d13c6a96594acd550ca7ee9c204e33f0 341 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 16 32 6.9E-25 T 26-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 smi_2076 d13c6a96594acd550ca7ee9c204e33f0 341 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 202 212 6.9E-25 T 26-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 smi_2076 d13c6a96594acd550ca7ee9c204e33f0 341 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 12 21 - T 26-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 smi_2076 d13c6a96594acd550ca7ee9c204e33f0 341 Gene3D G3DSA:1.10.240.10 218 327 5.0E-35 T 26-04-2016 smi_2076 d13c6a96594acd550ca7ee9c204e33f0 341 Gene3D G3DSA:3.40.50.620 3 217 5.4E-76 T 26-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold smi_2076 d13c6a96594acd550ca7ee9c204e33f0 341 Pfam PF00579 tRNA synthetases class I (W and Y) 4 290 1.4E-55 T 26-04-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 smi_1221 1d0e48865612b209280cefeb8ce781f7 119 PANTHER PTHR35813 1 114 3.8E-46 T 26-04-2016 smi_1221 1d0e48865612b209280cefeb8ce781f7 119 PANTHER PTHR35813:SF1 1 114 3.8E-46 T 26-04-2016 smi_1221 1d0e48865612b209280cefeb8ce781f7 119 Pfam PF04304 Protein of unknown function (DUF454) 2 114 6.2E-39 T 26-04-2016 IPR007401 Protein of unknown function DUF454 smi_1221 1d0e48865612b209280cefeb8ce781f7 119 PIRSF PIRSF016789 1 119 2.4E-46 T 26-04-2016 IPR007401 Protein of unknown function DUF454 smi_1543 9aafcc0e6963b36780575cf7b079eb00 898 Gene3D G3DSA:3.40.1110.10 325 527 1.1E-54 T 26-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 smi_1543 9aafcc0e6963b36780575cf7b079eb00 898 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 225 355 3.4E-24 T 26-04-2016 IPR001757 P-type ATPase GO:0016021 smi_1543 9aafcc0e6963b36780575cf7b079eb00 898 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 592 706 3.3E-34 T 26-04-2016 IPR001757 P-type ATPase GO:0016021 smi_1543 9aafcc0e6963b36780575cf7b079eb00 898 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 92 184 5.6E-21 T 26-04-2016 IPR001757 P-type ATPase GO:0016021 smi_1543 9aafcc0e6963b36780575cf7b079eb00 898 Pfam PF00702 haloacid dehalogenase-like hydrolase 332 639 3.5E-26 T 26-04-2016 smi_1543 9aafcc0e6963b36780575cf7b079eb00 898 Gene3D G3DSA:1.20.1110.10 594 890 1.7E-122 T 26-04-2016 IPR023298 P-type ATPase, transmembrane domain smi_1543 9aafcc0e6963b36780575cf7b079eb00 898 Gene3D G3DSA:1.20.1110.10 62 117 1.7E-122 T 26-04-2016 IPR023298 P-type ATPase, transmembrane domain smi_1543 9aafcc0e6963b36780575cf7b079eb00 898 Pfam PF00122 E1-E2 ATPase 90 325 3.5E-64 T 26-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 smi_1543 9aafcc0e6963b36780575cf7b079eb00 898 SUPERFAMILY SSF81665 675 890 8.11E-127 T 26-04-2016 smi_1543 9aafcc0e6963b36780575cf7b079eb00 898 SUPERFAMILY SSF81665 234 328 8.11E-127 T 26-04-2016 smi_1543 9aafcc0e6963b36780575cf7b079eb00 898 SUPERFAMILY SSF81665 10 123 8.11E-127 T 26-04-2016 smi_1543 9aafcc0e6963b36780575cf7b079eb00 898 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 478 496 2.4E-17 T 26-04-2016 IPR001757 P-type ATPase GO:0016021 smi_1543 9aafcc0e6963b36780575cf7b079eb00 898 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 657 682 2.4E-17 T 26-04-2016 IPR001757 P-type ATPase GO:0016021 smi_1543 9aafcc0e6963b36780575cf7b079eb00 898 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 597 613 2.4E-17 T 26-04-2016 IPR001757 P-type ATPase GO:0016021 smi_1543 9aafcc0e6963b36780575cf7b079eb00 898 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 625 641 2.4E-17 T 26-04-2016 IPR001757 P-type ATPase GO:0016021 smi_1543 9aafcc0e6963b36780575cf7b079eb00 898 PANTHER PTHR24093 11 896 0.0 T 26-04-2016 smi_1543 9aafcc0e6963b36780575cf7b079eb00 898 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 520 531 2.0E-38 T 26-04-2016 smi_1543 9aafcc0e6963b36780575cf7b079eb00 898 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 170 184 2.0E-38 T 26-04-2016 smi_1543 9aafcc0e6963b36780575cf7b079eb00 898 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 334 348 2.0E-38 T 26-04-2016 smi_1543 9aafcc0e6963b36780575cf7b079eb00 898 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 625 644 2.0E-38 T 26-04-2016 smi_1543 9aafcc0e6963b36780575cf7b079eb00 898 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 542 552 2.0E-38 T 26-04-2016 smi_1543 9aafcc0e6963b36780575cf7b079eb00 898 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 649 661 2.0E-38 T 26-04-2016 smi_1543 9aafcc0e6963b36780575cf7b079eb00 898 Pfam PF00689 Cation transporting ATPase, C-terminus 710 887 2.3E-46 T 26-04-2016 IPR006068 Cation-transporting P-type ATPase, C-terminal smi_1543 9aafcc0e6963b36780575cf7b079eb00 898 Gene3D G3DSA:2.70.150.10 26 61 2.9E-41 T 26-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 smi_1543 9aafcc0e6963b36780575cf7b079eb00 898 Gene3D G3DSA:2.70.150.10 118 233 2.9E-41 T 26-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 smi_1543 9aafcc0e6963b36780575cf7b079eb00 898 Pfam PF00690 Cation transporter/ATPase, N-terminus 11 77 7.0E-20 T 26-04-2016 IPR004014 Cation-transporting P-type ATPase, N-terminal smi_1543 9aafcc0e6963b36780575cf7b079eb00 898 SUPERFAMILY SSF56784 483 729 1.39E-59 T 26-04-2016 IPR023214 HAD-like domain smi_1543 9aafcc0e6963b36780575cf7b079eb00 898 SUPERFAMILY SSF56784 332 352 1.39E-59 T 26-04-2016 IPR023214 HAD-like domain smi_1543 9aafcc0e6963b36780575cf7b079eb00 898 SUPERFAMILY SSF81653 123 233 1.29E-29 T 26-04-2016 smi_1543 9aafcc0e6963b36780575cf7b079eb00 898 SMART SM00831 9 82 6.7E-28 T 26-04-2016 IPR004014 Cation-transporting P-type ATPase, N-terminal smi_1543 9aafcc0e6963b36780575cf7b079eb00 898 SUPERFAMILY SSF81660 340 532 6.05E-51 T 26-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 smi_1543 9aafcc0e6963b36780575cf7b079eb00 898 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 336 342 - T 26-04-2016 IPR018303 P-type ATPase, phosphorylation site smi_1265 149afb18c05dbfac1cd00433404a41df 115 SUPERFAMILY SSF50104 1 114 1.1E-47 T 26-04-2016 IPR008991 Translation protein SH3-like domain smi_1265 149afb18c05dbfac1cd00433404a41df 115 PRINTS PR00061 Ribosomal protein L19 signature 88 113 9.8E-43 T 26-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_1265 149afb18c05dbfac1cd00433404a41df 115 PRINTS PR00061 Ribosomal protein L19 signature 34 63 9.8E-43 T 26-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_1265 149afb18c05dbfac1cd00433404a41df 115 PRINTS PR00061 Ribosomal protein L19 signature 4 33 9.8E-43 T 26-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_1265 149afb18c05dbfac1cd00433404a41df 115 Pfam PF01245 Ribosomal protein L19 4 112 3.3E-52 T 26-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_1265 149afb18c05dbfac1cd00433404a41df 115 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 4 113 5.0E-50 T 26-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_1265 149afb18c05dbfac1cd00433404a41df 115 ProSitePatterns PS01015 Ribosomal protein L19 signature. 86 101 - T 26-04-2016 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_1265 149afb18c05dbfac1cd00433404a41df 115 PANTHER PTHR15680 1 115 8.2E-54 T 26-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_1265 149afb18c05dbfac1cd00433404a41df 115 PIRSF PIRSF002191 1 115 2.8E-50 T 26-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_1265 149afb18c05dbfac1cd00433404a41df 115 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 2 114 31.938 T 26-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_1566 181e85fdae7d01fdd50f49ba036fd463 314 PIRSF PIRSF000450 1 309 1.2E-154 T 26-04-2016 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46|UniPathway: UPA00051 smi_1566 181e85fdae7d01fdd50f49ba036fd463 314 PANTHER PTHR20919:SF0 2 313 6.1E-162 T 26-04-2016 smi_1566 181e85fdae7d01fdd50f49ba036fd463 314 PANTHER PTHR20919 2 313 6.1E-162 T 26-04-2016 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46|UniPathway: UPA00051 smi_1566 181e85fdae7d01fdd50f49ba036fd463 314 Hamap MF_00295 Homoserine O-succinyltransferase [metA]. 1 301 54.993 T 26-04-2016 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46|UniPathway: UPA00051 smi_1566 181e85fdae7d01fdd50f49ba036fd463 314 ProDom PD037892 HOMOSERINE O-SUCCINYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIOSYNTHESIS TRANSSUCCINYLASE HTS METHIONINE O- AMINO-ACID 36 289 1.0E-148 T 26-04-2016 smi_1566 181e85fdae7d01fdd50f49ba036fd463 314 SUPERFAMILY SSF52317 18 297 1.15E-96 T 26-04-2016 IPR029062 Class I glutamine amidotransferase-like smi_1566 181e85fdae7d01fdd50f49ba036fd463 314 Gene3D G3DSA:3.40.50.880 34 301 1.7E-120 T 26-04-2016 IPR029062 Class I glutamine amidotransferase-like smi_1566 181e85fdae7d01fdd50f49ba036fd463 314 Pfam PF04204 Homoserine O-succinyltransferase 2 299 1.0E-135 T 26-04-2016 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46|UniPathway: UPA00051 smi_1566 181e85fdae7d01fdd50f49ba036fd463 314 TIGRFAM TIGR01001 metA: homoserine O-succinyltransferase 1 301 1.4E-130 T 26-04-2016 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46|UniPathway: UPA00051 smi_0296 c9b4b31a01ba86c319986cfd7b4cc7ff 292 Pfam PF03193 Protein of unknown function, DUF258 58 215 2.9E-57 T 26-04-2016 IPR010914 RsgA type GTPase domain GO:0003924|GO:0005525 smi_0296 c9b4b31a01ba86c319986cfd7b4cc7ff 292 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 39 273 3.9E-73 T 26-04-2016 IPR004881 Ribosome biogenesis GTPase RsgA, putative GO:0003924|GO:0005525 smi_0296 c9b4b31a01ba86c319986cfd7b4cc7ff 292 PANTHER PTHR32120:SF2 1 281 2.7E-118 T 26-04-2016 smi_0296 c9b4b31a01ba86c319986cfd7b4cc7ff 292 Pfam PF16745 RsgA N-terminal domain 2 55 1.3E-25 T 26-04-2016 IPR031944 Ribosome biogenesis GTPase RsgA, N-terminal smi_0296 c9b4b31a01ba86c319986cfd7b4cc7ff 292 Gene3D G3DSA:3.40.50.300 62 214 9.4E-45 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0296 c9b4b31a01ba86c319986cfd7b4cc7ff 292 PANTHER PTHR32120 1 281 2.7E-118 T 26-04-2016 smi_0296 c9b4b31a01ba86c319986cfd7b4cc7ff 292 Gene3D G3DSA:2.40.50.140 1 60 1.4E-28 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold smi_0296 c9b4b31a01ba86c319986cfd7b4cc7ff 292 SUPERFAMILY SSF52540 64 280 2.25E-55 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0296 c9b4b31a01ba86c319986cfd7b4cc7ff 292 Gene3D G3DSA:1.10.40.50 219 288 3.6E-26 T 26-04-2016 smi_0296 c9b4b31a01ba86c319986cfd7b4cc7ff 292 Hamap MF_01820 Putative ribosome biogenesis GTPase RsgA [rsgA]. 1 280 38.473 T 26-04-2016 IPR004881 Ribosome biogenesis GTPase RsgA, putative GO:0003924|GO:0005525 smi_0296 c9b4b31a01ba86c319986cfd7b4cc7ff 292 SUPERFAMILY SSF50249 1 62 2.8E-16 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold smi_0280 ccad39a0bc59826eeb1a9c77a7d4129a 440 Pfam PF08245 Mur ligase middle domain 44 269 3.1E-11 T 26-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 smi_0280 ccad39a0bc59826eeb1a9c77a7d4129a 440 ProSitePatterns PS01011 Folylpolyglutamate synthase signature 1. 42 65 - T 26-04-2016 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 smi_0280 ccad39a0bc59826eeb1a9c77a7d4129a 440 Pfam PF02875 Mur ligase family, glutamate ligase domain 296 376 8.2E-13 T 26-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 smi_0280 ccad39a0bc59826eeb1a9c77a7d4129a 440 Gene3D G3DSA:3.40.1190.10 8 297 2.4E-86 T 26-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 smi_0280 ccad39a0bc59826eeb1a9c77a7d4129a 440 PANTHER PTHR11136 9 438 3.4E-135 T 26-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 smi_0280 ccad39a0bc59826eeb1a9c77a7d4129a 440 SUPERFAMILY SSF53623 10 278 9.68E-84 T 26-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 smi_0280 ccad39a0bc59826eeb1a9c77a7d4129a 440 SUPERFAMILY SSF53244 296 429 4.76E-22 T 26-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 smi_0280 ccad39a0bc59826eeb1a9c77a7d4129a 440 PANTHER PTHR11136:SF0 9 438 3.4E-135 T 26-04-2016 smi_0280 ccad39a0bc59826eeb1a9c77a7d4129a 440 PIRSF PIRSF001563 1 434 1.2E-124 T 26-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 smi_0280 ccad39a0bc59826eeb1a9c77a7d4129a 440 TIGRFAM TIGR01499 folC: bifunctional protein FolC 22 427 2.5E-114 T 26-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 smi_0280 ccad39a0bc59826eeb1a9c77a7d4129a 440 Gene3D G3DSA:3.90.190.20 298 430 3.4E-29 T 26-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 smi_0193 c7972765c474e91dac90244442c45edd 494 TIGRFAM TIGR00260 thrC: threonine synthase 82 441 2.0E-70 T 26-04-2016 IPR004450 Threonine synthase-like smi_0193 c7972765c474e91dac90244442c45edd 494 SUPERFAMILY SSF53686 3 485 5.0E-145 T 26-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme smi_0193 c7972765c474e91dac90244442c45edd 494 Pfam PF14821 Threonine synthase N terminus 5 80 5.8E-22 T 26-04-2016 IPR029144 Threonine synthase, N-terminal smi_0193 c7972765c474e91dac90244442c45edd 494 PANTHER PTHR10314 54 342 6.0E-127 T 26-04-2016 smi_0193 c7972765c474e91dac90244442c45edd 494 PANTHER PTHR10314 27 38 6.0E-127 T 26-04-2016 smi_0193 c7972765c474e91dac90244442c45edd 494 PANTHER PTHR10314 373 431 6.0E-127 T 26-04-2016 smi_0193 c7972765c474e91dac90244442c45edd 494 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 102 413 1.1E-12 T 26-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme smi_0193 c7972765c474e91dac90244442c45edd 494 Gene3D G3DSA:3.90.1380.10 4 85 1.5E-27 T 26-04-2016 IPR029144 Threonine synthase, N-terminal smi_0193 c7972765c474e91dac90244442c45edd 494 PANTHER PTHR10314:SF1 54 342 6.0E-127 T 26-04-2016 smi_0193 c7972765c474e91dac90244442c45edd 494 PANTHER PTHR10314:SF1 27 38 6.0E-127 T 26-04-2016 smi_0193 c7972765c474e91dac90244442c45edd 494 PANTHER PTHR10314:SF1 373 431 6.0E-127 T 26-04-2016 smi_0193 c7972765c474e91dac90244442c45edd 494 Gene3D G3DSA:3.40.50.1100 123 203 1.6E-10 T 26-04-2016 smi_0193 c7972765c474e91dac90244442c45edd 494 Gene3D G3DSA:3.40.50.1100 204 445 1.3E-89 T 26-04-2016 smi_2065 33e59e8606f4a71dd83b939ee5ed9d00 272 PANTHER PTHR34138 1 269 2.8E-61 T 26-04-2016 smi_2065 33e59e8606f4a71dd83b939ee5ed9d00 272 PANTHER PTHR34138:SF1 1 269 2.8E-61 T 26-04-2016 smi_2065 33e59e8606f4a71dd83b939ee5ed9d00 272 PIRSF PIRSF038471 1 271 1.6E-44 T 26-04-2016 IPR007221 Rod shape-determining protein MreC GO:0008360 smi_2065 33e59e8606f4a71dd83b939ee5ed9d00 272 Pfam PF04085 rod shape-determining protein MreC 118 266 3.7E-30 T 26-04-2016 IPR007221 Rod shape-determining protein MreC GO:0008360 smi_2065 33e59e8606f4a71dd83b939ee5ed9d00 272 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 4 263 1.0E-34 T 26-04-2016 IPR007221 Rod shape-determining protein MreC GO:0008360 smi_0558 fd8cf0e5363608524d45b6fc2370674f 143 Pfam PF02082 Transcriptional regulator 2 77 3.5E-19 T 26-04-2016 IPR000944 Transcription regulator Rrf2-type smi_0558 fd8cf0e5363608524d45b6fc2370674f 143 PANTHER PTHR33221 1 142 4.4E-41 T 26-04-2016 smi_0558 fd8cf0e5363608524d45b6fc2370674f 143 PANTHER PTHR33221:SF5 1 142 4.4E-41 T 26-04-2016 smi_0558 fd8cf0e5363608524d45b6fc2370674f 143 SUPERFAMILY SSF46785 2 134 1.92E-28 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain smi_0558 fd8cf0e5363608524d45b6fc2370674f 143 Gene3D G3DSA:1.10.10.10 1 140 6.8E-45 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain smi_0103 9e1978add796e84f776d8ff82d3f0231 112 PANTHER PTHR33154 45 111 4.0E-13 T 26-04-2016 smi_0103 9e1978add796e84f776d8ff82d3f0231 112 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 56 67 7.9E-13 T 26-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 smi_0103 9e1978add796e84f776d8ff82d3f0231 112 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 36 51 7.9E-13 T 26-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 smi_0103 9e1978add796e84f776d8ff82d3f0231 112 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 69 84 7.9E-13 T 26-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 smi_0103 9e1978add796e84f776d8ff82d3f0231 112 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 84 99 7.9E-13 T 26-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 smi_0103 9e1978add796e84f776d8ff82d3f0231 112 SMART SM00418 34 112 3.2E-11 T 26-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 smi_0103 9e1978add796e84f776d8ff82d3f0231 112 ProSitePatterns PS00846 Bacterial regulatory proteins, arsR family signature. 58 76 - T 26-04-2016 IPR018334 ArsR-type transcription regulator, HTH motif GO:0003700|GO:0005622|GO:0006355 smi_0103 9e1978add796e84f776d8ff82d3f0231 112 Pfam PF01022 Bacterial regulatory protein, arsR family 43 86 1.1E-11 T 26-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 smi_0103 9e1978add796e84f776d8ff82d3f0231 112 SUPERFAMILY SSF46785 20 111 2.73E-18 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain smi_0103 9e1978add796e84f776d8ff82d3f0231 112 Gene3D G3DSA:1.10.10.10 2 111 7.3E-26 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain smi_1718 664cfdc62922b8a8c08dde0eaea89ee7 242 Pfam PF00005 ABC transporter 18 160 2.1E-25 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 smi_1718 664cfdc62922b8a8c08dde0eaea89ee7 242 SUPERFAMILY SSF52540 2 224 5.67E-56 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1718 664cfdc62922b8a8c08dde0eaea89ee7 242 Gene3D G3DSA:3.40.50.300 1 226 7.4E-60 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1718 664cfdc62922b8a8c08dde0eaea89ee7 242 PANTHER PTHR24220 3 236 2.4E-84 T 26-04-2016 smi_1718 664cfdc62922b8a8c08dde0eaea89ee7 242 PANTHER PTHR24220:SF160 3 236 2.4E-84 T 26-04-2016 smi_1718 664cfdc62922b8a8c08dde0eaea89ee7 242 SMART SM00382 26 208 9.6E-8 T 26-04-2016 IPR003593 AAA+ ATPase domain smi_2047 3129218de9d3647767e1c4e47e36fb18 242 SUPERFAMILY SSF52540 4 227 6.62E-56 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_2047 3129218de9d3647767e1c4e47e36fb18 242 Gene3D G3DSA:3.40.50.300 3 215 2.2E-59 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_2047 3129218de9d3647767e1c4e47e36fb18 242 Pfam PF00005 ABC transporter 19 156 1.1E-26 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 smi_2047 3129218de9d3647767e1c4e47e36fb18 242 ProSitePatterns PS00211 ABC transporters family signature. 129 143 - T 26-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 smi_2047 3129218de9d3647767e1c4e47e36fb18 242 SMART SM00382 28 205 4.6E-15 T 26-04-2016 IPR003593 AAA+ ATPase domain smi_2047 3129218de9d3647767e1c4e47e36fb18 242 PANTHER PTHR24220:SF14 5 228 3.4E-100 T 26-04-2016 smi_2047 3129218de9d3647767e1c4e47e36fb18 242 PANTHER PTHR24220 5 228 3.4E-100 T 26-04-2016 smi_0916 45d287073235a7980ed4b8b48682e2d3 420 PANTHER PTHR30508:SF0 1 418 2.7E-148 T 26-04-2016 smi_0916 45d287073235a7980ed4b8b48682e2d3 420 TIGRFAM TIGR01981 sufD: FeS assembly protein SufD 132 408 1.2E-80 T 26-04-2016 IPR011542 SUF system FeS cluster assembly, SufD GO:0016226 smi_0916 45d287073235a7980ed4b8b48682e2d3 420 SUPERFAMILY SSF101960 4 418 1.7E-118 T 26-04-2016 smi_0916 45d287073235a7980ed4b8b48682e2d3 420 PANTHER PTHR30508 1 418 2.7E-148 T 26-04-2016 smi_0916 45d287073235a7980ed4b8b48682e2d3 420 Pfam PF01458 Uncharacterized protein family (UPF0051) 167 392 9.2E-58 T 26-04-2016 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 smi_1670 0f268aae7f10cd0d1493dc6c1f6628f8 129 PANTHER PTHR34297 1 129 8.7E-40 T 26-04-2016 smi_1670 0f268aae7f10cd0d1493dc6c1f6628f8 129 Pfam PF03780 Asp23 family, cell envelope-related function 7 108 1.3E-29 T 26-04-2016 IPR005531 Alkaline shock protein Asp23 smi_1670 0f268aae7f10cd0d1493dc6c1f6628f8 129 PANTHER PTHR34297:SF1 1 129 8.7E-40 T 26-04-2016 smi_0608 9184e58de58376949014d359dbb6dfbb 305 Pfam PF00701 Dihydrodipicolinate synthetase family 7 293 2.7E-59 T 26-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 smi_0608 9184e58de58376949014d359dbb6dfbb 305 PANTHER PTHR12128 5 299 4.2E-123 T 26-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 smi_0608 9184e58de58376949014d359dbb6dfbb 305 SUPERFAMILY SSF51569 7 293 5.55E-72 T 26-04-2016 smi_0608 9184e58de58376949014d359dbb6dfbb 305 PANTHER PTHR12128:SF30 5 299 4.2E-123 T 26-04-2016 smi_0608 9184e58de58376949014d359dbb6dfbb 305 SMART SM01130 6 298 6.2E-66 T 26-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 smi_0608 9184e58de58376949014d359dbb6dfbb 305 PRINTS PR00146 Dihydrodipicolinate synthase signature 40 61 5.0E-13 T 26-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 smi_0608 9184e58de58376949014d359dbb6dfbb 305 PRINTS PR00146 Dihydrodipicolinate synthase signature 108 124 5.0E-13 T 26-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 smi_0608 9184e58de58376949014d359dbb6dfbb 305 PRINTS PR00146 Dihydrodipicolinate synthase signature 134 151 5.0E-13 T 26-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 smi_0608 9184e58de58376949014d359dbb6dfbb 305 PRINTS PR00146 Dihydrodipicolinate synthase signature 76 94 5.0E-13 T 26-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 smi_0608 9184e58de58376949014d359dbb6dfbb 305 PIRSF PIRSF001365 2 304 4.0E-74 T 26-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 smi_0608 9184e58de58376949014d359dbb6dfbb 305 Gene3D G3DSA:3.20.20.70 4 302 6.1E-78 T 26-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 smi_1017 3d28f205702ce0c6584ed9cc5ec96548 271 PANTHER PTHR32319 1 265 7.6E-132 T 26-04-2016 smi_1017 3d28f205702ce0c6584ed9cc5ec96548 271 Pfam PF01728 FtsJ-like methyltransferase 62 243 2.2E-18 T 26-04-2016 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 smi_1017 3d28f205702ce0c6584ed9cc5ec96548 271 TIGRFAM TIGR00478 tly: TlyA family rRNA methyltransferase/putative hemolysin 5 238 2.0E-76 T 26-04-2016 IPR004538 Haemolysin A /rRNA methyltransferase TlyA GO:0003723 smi_1017 3d28f205702ce0c6584ed9cc5ec96548 271 Gene3D G3DSA:3.10.290.10 4 105 7.4E-19 T 26-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 smi_1017 3d28f205702ce0c6584ed9cc5ec96548 271 PANTHER PTHR32319:SF0 1 265 7.6E-132 T 26-04-2016 smi_1017 3d28f205702ce0c6584ed9cc5ec96548 271 SMART SM00363 4 71 0.0031 T 26-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 smi_1017 3d28f205702ce0c6584ed9cc5ec96548 271 SUPERFAMILY SSF55174 3 71 1.16E-8 T 26-04-2016 smi_1017 3d28f205702ce0c6584ed9cc5ec96548 271 SUPERFAMILY SSF53335 56 247 7.75E-20 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase smi_1017 3d28f205702ce0c6584ed9cc5ec96548 271 PIRSF PIRSF005578 1 266 1.3E-97 T 26-04-2016 IPR004538 Haemolysin A /rRNA methyltransferase TlyA GO:0003723 smi_0955 aa6d3754c193db78740f366527e66b45 209 Pfam PF10531 SLBB domain 69 118 1.9E-14 T 26-04-2016 IPR019554 Soluble ligand binding domain smi_0955 aa6d3754c193db78740f366527e66b45 209 TIGRFAM TIGR00426 TIGR00426: competence protein ComEA helix-hairpin-helix repeat region 144 208 2.3E-20 T 26-04-2016 IPR004509 Competence protein ComEA, helix-hairpin-helix domain smi_0955 aa6d3754c193db78740f366527e66b45 209 SUPERFAMILY SSF47781 126 208 1.0E-29 T 26-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 smi_0955 aa6d3754c193db78740f366527e66b45 209 TIGRFAM TIGR01259 comE: comEA protein 86 208 1.0E-53 T 26-04-2016 IPR004787 Competence protein ComEA smi_0955 aa6d3754c193db78740f366527e66b45 209 Gene3D G3DSA:3.10.560.10 67 141 6.4E-10 T 26-04-2016 smi_0955 aa6d3754c193db78740f366527e66b45 209 SMART SM00278 186 205 0.012 T 26-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 smi_0955 aa6d3754c193db78740f366527e66b45 209 SMART SM00278 156 175 0.043 T 26-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 smi_0955 aa6d3754c193db78740f366527e66b45 209 Pfam PF12836 Helix-hairpin-helix motif 144 207 6.5E-25 T 26-04-2016 smi_0955 aa6d3754c193db78740f366527e66b45 209 Gene3D G3DSA:1.10.150.320 142 208 3.5E-23 T 26-04-2016 smi_0955 aa6d3754c193db78740f366527e66b45 209 PANTHER PTHR21180 5 209 3.2E-47 T 26-04-2016 smi_2084 ce2104c15989045a38f558b47df6706b 441 Pfam PF14501 GHKL domain 334 435 7.3E-16 T 26-04-2016 IPR032834 Sensor histidine kinase NatK, C-terminal domain smi_2084 ce2104c15989045a38f558b47df6706b 441 PANTHER PTHR40448:SF1 5 440 2.2E-119 T 26-04-2016 smi_2084 ce2104c15989045a38f558b47df6706b 441 SUPERFAMILY SSF55874 301 436 3.23E-10 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain smi_2084 ce2104c15989045a38f558b47df6706b 441 Gene3D G3DSA:3.30.565.10 302 431 9.3E-8 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain smi_2084 ce2104c15989045a38f558b47df6706b 441 PANTHER PTHR40448 5 440 2.2E-119 T 26-04-2016 smi_1681 c27e0312ada5e0d3346bd52af00f14b7 307 Gene3D G3DSA:3.30.70.250 123 194 5.8E-28 T 26-04-2016 smi_1681 c27e0312ada5e0d3346bd52af00f14b7 307 PANTHER PTHR10982 1 306 2.2E-138 T 26-04-2016 smi_1681 c27e0312ada5e0d3346bd52af00f14b7 307 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 7 307 8.3E-53 T 26-04-2016 IPR020801 Polyketide synthase, acyl transferase domain smi_1681 c27e0312ada5e0d3346bd52af00f14b7 307 Gene3D G3DSA:3.40.366.10 2 120 5.0E-74 T 26-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 smi_1681 c27e0312ada5e0d3346bd52af00f14b7 307 Gene3D G3DSA:3.40.366.10 195 298 5.0E-74 T 26-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 smi_1681 c27e0312ada5e0d3346bd52af00f14b7 307 SUPERFAMILY SSF55048 126 195 1.28E-16 T 26-04-2016 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding GO:0003824|GO:0008152 smi_1681 c27e0312ada5e0d3346bd52af00f14b7 307 Pfam PF00698 Acyl transferase domain 6 284 3.2E-40 T 26-04-2016 IPR014043 Acyl transferase smi_1681 c27e0312ada5e0d3346bd52af00f14b7 307 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 3 288 1.2E-103 T 26-04-2016 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 smi_1681 c27e0312ada5e0d3346bd52af00f14b7 307 SUPERFAMILY SSF52151 4 120 7.06E-77 T 26-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 smi_1681 c27e0312ada5e0d3346bd52af00f14b7 307 SUPERFAMILY SSF52151 188 304 7.06E-77 T 26-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 smi_1681 c27e0312ada5e0d3346bd52af00f14b7 307 PIRSF PIRSF000446 1 306 2.5E-103 T 26-04-2016 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388|UniPathway: UPA00094 smi_1005 33c54f9010c88d7b4e638b755b881737 501 Pfam PF00224 Pyruvate kinase, barrel domain 3 370 4.9E-148 T 26-04-2016 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 smi_1005 33c54f9010c88d7b4e638b755b881737 501 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 37 500 3.6E-152 T 26-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 smi_1005 33c54f9010c88d7b4e638b755b881737 501 SUPERFAMILY SSF50800 92 194 8.55E-18 T 26-04-2016 IPR011037 Pyruvate kinase-like, insert domain smi_1005 33c54f9010c88d7b4e638b755b881737 501 Gene3D G3DSA:3.20.20.60 197 354 3.6E-98 T 26-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 smi_1005 33c54f9010c88d7b4e638b755b881737 501 Gene3D G3DSA:3.20.20.60 4 94 3.6E-98 T 26-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 smi_1005 33c54f9010c88d7b4e638b755b881737 501 Gene3D G3DSA:2.40.33.10 95 196 1.4E-22 T 26-04-2016 IPR015806 Pyruvate kinase, beta-barrel insert domain GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 smi_1005 33c54f9010c88d7b4e638b755b881737 501 PANTHER PTHR11817 1 16 3.2E-194 T 26-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 smi_1005 33c54f9010c88d7b4e638b755b881737 501 PANTHER PTHR11817 38 501 3.2E-194 T 26-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 smi_1005 33c54f9010c88d7b4e638b755b881737 501 SUPERFAMILY SSF52935 351 500 2.35E-38 T 26-04-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 smi_1005 33c54f9010c88d7b4e638b755b881737 501 SUPERFAMILY SSF51621 2 96 5.93E-84 T 26-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 smi_1005 33c54f9010c88d7b4e638b755b881737 501 SUPERFAMILY SSF51621 184 367 5.93E-84 T 26-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 smi_1005 33c54f9010c88d7b4e638b755b881737 501 Pfam PF02887 Pyruvate kinase, alpha/beta domain 386 497 2.4E-34 T 26-04-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 smi_1005 33c54f9010c88d7b4e638b755b881737 501 PANTHER PTHR11817:SF3 1 16 3.2E-194 T 26-04-2016 smi_1005 33c54f9010c88d7b4e638b755b881737 501 PANTHER PTHR11817:SF3 38 501 3.2E-194 T 26-04-2016 smi_1005 33c54f9010c88d7b4e638b755b881737 501 PRINTS PR01050 Pyruvate kinase family signature 322 340 5.3E-67 T 26-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 smi_1005 33c54f9010c88d7b4e638b755b881737 501 PRINTS PR01050 Pyruvate kinase family signature 214 228 5.3E-67 T 26-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 smi_1005 33c54f9010c88d7b4e638b755b881737 501 PRINTS PR01050 Pyruvate kinase family signature 341 357 5.3E-67 T 26-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 smi_1005 33c54f9010c88d7b4e638b755b881737 501 PRINTS PR01050 Pyruvate kinase family signature 81 97 5.3E-67 T 26-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 smi_1005 33c54f9010c88d7b4e638b755b881737 501 PRINTS PR01050 Pyruvate kinase family signature 245 271 5.3E-67 T 26-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 smi_1005 33c54f9010c88d7b4e638b755b881737 501 PRINTS PR01050 Pyruvate kinase family signature 272 296 5.3E-67 T 26-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 smi_1005 33c54f9010c88d7b4e638b755b881737 501 PRINTS PR01050 Pyruvate kinase family signature 297 321 5.3E-67 T 26-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 smi_1005 33c54f9010c88d7b4e638b755b881737 501 Gene3D G3DSA:3.40.1380.20 355 500 2.9E-46 T 26-04-2016 IPR015794 Pyruvate kinase, alpha/beta GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 smi_0593 f22a705cd8a08e43f86a0f6be2c6a24f 367 SUPERFAMILY SSF51419 13 243 6.83E-64 T 26-04-2016 IPR029066 PLP-binding barrel smi_0593 f22a705cd8a08e43f86a0f6be2c6a24f 367 Gene3D G3DSA:3.20.20.10 15 221 4.5E-70 T 26-04-2016 IPR029066 PLP-binding barrel smi_0593 f22a705cd8a08e43f86a0f6be2c6a24f 367 Hamap MF_01201 Alanine racemase. 6 367 35.044 T 26-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 smi_0593 f22a705cd8a08e43f86a0f6be2c6a24f 367 Pfam PF00842 Alanine racemase, C-terminal domain 242 366 2.6E-37 T 26-04-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 smi_0593 f22a705cd8a08e43f86a0f6be2c6a24f 367 PANTHER PTHR30511:SF0 3 367 3.5E-160 T 26-04-2016 smi_0593 f22a705cd8a08e43f86a0f6be2c6a24f 367 Pfam PF01168 Alanine racemase, N-terminal domain 13 228 3.4E-64 T 26-04-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 smi_0593 f22a705cd8a08e43f86a0f6be2c6a24f 367 PRINTS PR00992 Alanine racemase signature 349 362 3.47E-65 T 26-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 smi_0593 f22a705cd8a08e43f86a0f6be2c6a24f 367 PRINTS PR00992 Alanine racemase signature 67 85 3.47E-65 T 26-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 smi_0593 f22a705cd8a08e43f86a0f6be2c6a24f 367 PRINTS PR00992 Alanine racemase signature 201 228 3.47E-65 T 26-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 smi_0593 f22a705cd8a08e43f86a0f6be2c6a24f 367 PRINTS PR00992 Alanine racemase signature 127 139 3.47E-65 T 26-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 smi_0593 f22a705cd8a08e43f86a0f6be2c6a24f 367 PRINTS PR00992 Alanine racemase signature 258 273 3.47E-65 T 26-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 smi_0593 f22a705cd8a08e43f86a0f6be2c6a24f 367 PRINTS PR00992 Alanine racemase signature 275 290 3.47E-65 T 26-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 smi_0593 f22a705cd8a08e43f86a0f6be2c6a24f 367 PRINTS PR00992 Alanine racemase signature 32 48 3.47E-65 T 26-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 smi_0593 f22a705cd8a08e43f86a0f6be2c6a24f 367 PRINTS PR00992 Alanine racemase signature 161 172 3.47E-65 T 26-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 smi_0593 f22a705cd8a08e43f86a0f6be2c6a24f 367 PRINTS PR00992 Alanine racemase signature 295 312 3.47E-65 T 26-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 smi_0593 f22a705cd8a08e43f86a0f6be2c6a24f 367 TIGRFAM TIGR00492 alr: alanine racemase 9 366 8.4E-109 T 26-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 smi_0593 f22a705cd8a08e43f86a0f6be2c6a24f 367 SUPERFAMILY SSF50621 237 367 7.32E-48 T 26-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 smi_0593 f22a705cd8a08e43f86a0f6be2c6a24f 367 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 37 47 - T 26-04-2016 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 smi_0593 f22a705cd8a08e43f86a0f6be2c6a24f 367 PANTHER PTHR30511 3 367 3.5E-160 T 26-04-2016 smi_0593 f22a705cd8a08e43f86a0f6be2c6a24f 367 Gene3D G3DSA:2.40.37.10 222 366 1.2E-54 T 26-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 smi_0593 f22a705cd8a08e43f86a0f6be2c6a24f 367 SMART SM01005 242 367 4.9E-63 T 26-04-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 smi_0547 5e9255dd1ca9a8173238b0343910ff10 258 Gene3D G3DSA:3.20.20.70 5 255 4.1E-81 T 26-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 smi_0547 5e9255dd1ca9a8173238b0343910ff10 258 PANTHER PTHR10314:SF4 10 54 2.2E-19 T 26-04-2016 smi_0547 5e9255dd1ca9a8173238b0343910ff10 258 PANTHER PTHR10314:SF4 77 130 2.2E-19 T 26-04-2016 smi_0547 5e9255dd1ca9a8173238b0343910ff10 258 SUPERFAMILY SSF51366 5 243 8.63E-69 T 26-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 smi_0547 5e9255dd1ca9a8173238b0343910ff10 258 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 15 256 29.764 T 26-04-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 smi_0547 5e9255dd1ca9a8173238b0343910ff10 258 PANTHER PTHR10314 10 54 2.2E-19 T 26-04-2016 smi_0547 5e9255dd1ca9a8173238b0343910ff10 258 PANTHER PTHR10314 77 130 2.2E-19 T 26-04-2016 smi_0547 5e9255dd1ca9a8173238b0343910ff10 258 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 11 243 1.1E-59 T 26-04-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 smi_0547 5e9255dd1ca9a8173238b0343910ff10 258 Pfam PF00290 Tryptophan synthase alpha chain 11 242 5.5E-80 T 26-04-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 smi_0547 5e9255dd1ca9a8173238b0343910ff10 258 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 51 64 - T 26-04-2016 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 smi_0072 41994f534a2100caa20d3efde5a99b35 515 Pfam PF02142 MGS-like domain 14 128 1.4E-25 T 26-04-2016 IPR011607 Methylglyoxal synthase-like domain smi_0072 41994f534a2100caa20d3efde5a99b35 515 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 3 515 1.3E-212 T 26-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 smi_0072 41994f534a2100caa20d3efde5a99b35 515 SUPERFAMILY SSF52335 2 194 3.66E-70 T 26-04-2016 IPR011607 Methylglyoxal synthase-like domain smi_0072 41994f534a2100caa20d3efde5a99b35 515 Gene3D G3DSA:3.40.140.20 366 505 5.7E-56 T 26-04-2016 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 smi_0072 41994f534a2100caa20d3efde5a99b35 515 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 2 515 44.334 T 26-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 smi_0072 41994f534a2100caa20d3efde5a99b35 515 SMART SM00851 14 129 2.9E-50 T 26-04-2016 IPR011607 Methylglyoxal synthase-like domain smi_0072 41994f534a2100caa20d3efde5a99b35 515 Pfam PF01808 AICARFT/IMPCHase bienzyme 134 448 2.6E-114 T 26-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 smi_0072 41994f534a2100caa20d3efde5a99b35 515 PANTHER PTHR11692:SF2 1 515 2.8E-298 T 26-04-2016 smi_0072 41994f534a2100caa20d3efde5a99b35 515 Gene3D G3DSA:3.40.50.1380 2 186 8.1E-84 T 26-04-2016 IPR011607 Methylglyoxal synthase-like domain smi_0072 41994f534a2100caa20d3efde5a99b35 515 PIRSF PIRSF000414 1 515 2.0E-207 T 26-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 smi_0072 41994f534a2100caa20d3efde5a99b35 515 SMART SM00798 134 450 2.6E-184 T 26-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 smi_0072 41994f534a2100caa20d3efde5a99b35 515 PANTHER PTHR11692 1 515 2.8E-298 T 26-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 smi_0072 41994f534a2100caa20d3efde5a99b35 515 Gene3D G3DSA:3.40.140.20 239 358 5.9E-46 T 26-04-2016 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 smi_0072 41994f534a2100caa20d3efde5a99b35 515 SUPERFAMILY SSF53927 208 515 2.71E-119 T 26-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 smi_1712 135799a7a7bb408dfcfd48f08bf1dbe6 289 Pfam PF01909 Nucleotidyltransferase domain 6 114 2.1E-14 T 26-04-2016 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 smi_1712 135799a7a7bb408dfcfd48f08bf1dbe6 289 SUPERFAMILY SSF81301 4 114 4.53E-12 T 26-04-2016 smi_1712 135799a7a7bb408dfcfd48f08bf1dbe6 289 Gene3D G3DSA:3.30.460.10 3 107 1.4E-13 T 26-04-2016 smi_2049 f276d84f7eaf68fe9b4247405fbf175d 253 Gene3D G3DSA:1.10.3720.10 56 247 5.9E-24 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 smi_2049 f276d84f7eaf68fe9b4247405fbf175d 253 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 74 249 1.8E-28 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 smi_2049 f276d84f7eaf68fe9b4247405fbf175d 253 PANTHER PTHR30151 10 252 3.3E-98 T 26-04-2016 smi_2049 f276d84f7eaf68fe9b4247405fbf175d 253 SUPERFAMILY SSF161098 54 235 6.8E-30 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 smi_2049 f276d84f7eaf68fe9b4247405fbf175d 253 PANTHER PTHR30151:SF20 10 252 3.3E-98 T 26-04-2016 smi_1177 c02f496aac71ffe74f2ea0426319052b 235 SUPERFAMILY SSF52172 1 121 3.84E-42 T 26-04-2016 IPR011006 CheY-like superfamily smi_1177 c02f496aac71ffe74f2ea0426319052b 235 Gene3D G3DSA:1.10.10.10 132 233 1.6E-35 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain smi_1177 c02f496aac71ffe74f2ea0426319052b 235 PANTHER PTHR26402 2 234 9.7E-106 T 26-04-2016 smi_1177 c02f496aac71ffe74f2ea0426319052b 235 SUPERFAMILY SSF46894 132 232 2.3E-30 T 26-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 smi_1177 c02f496aac71ffe74f2ea0426319052b 235 SMART SM00448 2 112 2.4E-47 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 smi_1177 c02f496aac71ffe74f2ea0426319052b 235 PANTHER PTHR26402:SF614 2 234 9.7E-106 T 26-04-2016 smi_1177 c02f496aac71ffe74f2ea0426319052b 235 Gene3D G3DSA:3.40.50.2300 2 123 6.1E-43 T 26-04-2016 smi_1177 c02f496aac71ffe74f2ea0426319052b 235 SMART SM00862 155 231 1.3E-27 T 26-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 smi_1177 c02f496aac71ffe74f2ea0426319052b 235 Pfam PF00072 Response regulator receiver domain 4 112 5.9E-31 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 smi_1177 c02f496aac71ffe74f2ea0426319052b 235 Pfam PF00486 Transcriptional regulatory protein, C terminal 155 230 1.6E-27 T 26-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 smi_0364 f8b78f6e0678397dc453b49a62acad43 112 Pfam PF04397 LytTr DNA-binding domain 11 107 2.2E-22 T 26-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 smi_0364 f8b78f6e0678397dc453b49a62acad43 112 Gene3D G3DSA:2.40.50.40 2 72 2.0E-16 T 26-04-2016 smi_0364 f8b78f6e0678397dc453b49a62acad43 112 SMART SM00850 10 108 4.0E-21 T 26-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 smi_0645 5544db0106359da9ae034b85b1339ddf 216 Pfam PF01325 Iron dependent repressor, N-terminal DNA binding domain 2 51 5.1E-13 T 26-04-2016 IPR022687 DTXR-type HTH domain GO:0003677 smi_0645 5544db0106359da9ae034b85b1339ddf 216 SUPERFAMILY SSF46785 1 60 4.68E-13 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain smi_0645 5544db0106359da9ae034b85b1339ddf 216 PANTHER PTHR33238 1 216 7.4E-93 T 26-04-2016 smi_0645 5544db0106359da9ae034b85b1339ddf 216 PANTHER PTHR33238:SF1 1 216 7.4E-93 T 26-04-2016 smi_0645 5544db0106359da9ae034b85b1339ddf 216 SMART SM00899 142 214 7.7E-5 T 26-04-2016 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 smi_0645 5544db0106359da9ae034b85b1339ddf 216 Gene3D G3DSA:1.10.60.10 72 134 3.3E-30 T 26-04-2016 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 smi_0645 5544db0106359da9ae034b85b1339ddf 216 Gene3D G3DSA:1.10.10.10 1 69 6.8E-22 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain smi_0645 5544db0106359da9ae034b85b1339ddf 216 SMART SM00529 23 122 1.4E-39 T 26-04-2016 IPR022689 Iron dependent repressor GO:0003700|GO:0006355|GO:0046914 smi_0645 5544db0106359da9ae034b85b1339ddf 216 SUPERFAMILY SSF47979 62 137 5.23E-25 T 26-04-2016 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 smi_0645 5544db0106359da9ae034b85b1339ddf 216 Pfam PF02742 Iron dependent repressor, metal binding and dimerisation domain 62 130 3.1E-27 T 26-04-2016 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 smi_0340 46ff017622b28297318cf488dc0610a9 78 Hamap MF_00386 Putative membrane protein insertion efficiency factor [yidD]. 1 68 24.168 T 26-04-2016 IPR002696 Putative membrane protein insertion efficiency factor smi_0340 46ff017622b28297318cf488dc0610a9 78 ProDom PD004225 UPF0161 ALPHA-HEMOLYSIN YIDD UNCHARACTERIZED CYTOSOLIC PRECURSOR SIGNAL YTJA RNPA SIMILAR 16 67 1.0E-23 T 26-04-2016 IPR002696 Putative membrane protein insertion efficiency factor smi_0340 46ff017622b28297318cf488dc0610a9 78 TIGRFAM TIGR00278 TIGR00278: putative membrane protein insertion efficiency factor 5 72 5.1E-26 T 26-04-2016 IPR002696 Putative membrane protein insertion efficiency factor smi_0340 46ff017622b28297318cf488dc0610a9 78 PANTHER PTHR33383 1 78 1.9E-40 T 26-04-2016 smi_0340 46ff017622b28297318cf488dc0610a9 78 SMART SM01234 1 67 2.4E-44 T 26-04-2016 IPR002696 Putative membrane protein insertion efficiency factor smi_0340 46ff017622b28297318cf488dc0610a9 78 Pfam PF01809 Haemolytic domain 2 67 3.9E-29 T 26-04-2016 IPR002696 Putative membrane protein insertion efficiency factor smi_1268 9eb34fe736a2e4c9ce9bfea072a10acd 88 TIGRFAM TIGR01805 CM_mono_grmpos: chorismate mutase 3 83 4.0E-37 T 26-04-2016 IPR011279 Chorismate mutase, Gram-positive smi_1268 9eb34fe736a2e4c9ce9bfea072a10acd 88 SMART SM00830 7 86 1.9E-23 T 26-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 smi_1268 9eb34fe736a2e4c9ce9bfea072a10acd 88 SUPERFAMILY SSF48600 2 85 9.31E-21 T 26-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 smi_1268 9eb34fe736a2e4c9ce9bfea072a10acd 88 PANTHER PTHR38041 1 87 6.5E-23 T 26-04-2016 smi_1268 9eb34fe736a2e4c9ce9bfea072a10acd 88 Gene3D G3DSA:1.20.59.10 1 84 2.0E-23 T 26-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 smi_1268 9eb34fe736a2e4c9ce9bfea072a10acd 88 Pfam PF01817 Chorismate mutase type II 7 83 2.9E-22 T 26-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 smi_1571 7abb572d6f8da12efe8e007de575b7ef 238 Pfam PF02557 D-alanyl-D-alanine carboxypeptidase 92 213 2.7E-37 T 26-04-2016 IPR003709 Peptidase M15B GO:0006508|GO:0008233 smi_1571 7abb572d6f8da12efe8e007de575b7ef 238 PANTHER PTHR34385 4 238 2.5E-74 T 26-04-2016 smi_1571 7abb572d6f8da12efe8e007de575b7ef 238 PANTHER PTHR34385:SF1 4 238 2.5E-74 T 26-04-2016 smi_1571 7abb572d6f8da12efe8e007de575b7ef 238 SUPERFAMILY SSF55166 92 215 1.18E-28 T 26-04-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain smi_0772 41ba3fb4823fb6398cc171d06a79cb3f 245 Hamap MF_01124 Adapter protein MecA [mecA]. 1 245 25.035 T 26-04-2016 IPR008681 Negative regulator of genetic competence, MecA smi_0772 41ba3fb4823fb6398cc171d06a79cb3f 245 Pfam PF05389 Negative regulator of genetic competence (MecA) 1 239 6.2E-43 T 26-04-2016 IPR008681 Negative regulator of genetic competence, MecA smi_0772 41ba3fb4823fb6398cc171d06a79cb3f 245 PIRSF PIRSF029008 1 245 8.3E-73 T 26-04-2016 IPR008681 Negative regulator of genetic competence, MecA smi_0772 41ba3fb4823fb6398cc171d06a79cb3f 245 PANTHER PTHR39161:SF1 2 244 8.6E-115 T 26-04-2016 smi_0772 41ba3fb4823fb6398cc171d06a79cb3f 245 PANTHER PTHR39161 2 244 8.6E-115 T 26-04-2016 smi_1538 bf0e2087dca0c3dcaadf3c7d157a2769 2322 SUPERFAMILY SSF50494 142 357 6.55E-22 T 26-04-2016 IPR009003 Peptidase S1, PA clan smi_1538 bf0e2087dca0c3dcaadf3c7d157a2769 2322 Gene3D G3DSA:2.60.120.260 1812 1934 5.6E-21 T 26-04-2016 IPR008979 Galactose-binding domain-like smi_1538 bf0e2087dca0c3dcaadf3c7d157a2769 2322 Pfam PF12905 Endo-alpha-N-acetylgalactosaminidase 893 1330 4.4E-177 T 26-04-2016 IPR025706 Endo-alpha-N-acetylgalactosaminidase GO:0033926 smi_1538 bf0e2087dca0c3dcaadf3c7d157a2769 2322 Pfam PF00754 F5/8 type C domain 1815 1931 2.4E-11 T 26-04-2016 IPR000421 Coagulation factor 5/8 C-terminal domain smi_1538 bf0e2087dca0c3dcaadf3c7d157a2769 2322 Gene3D G3DSA:2.40.10.10 241 351 2.9E-14 T 26-04-2016 smi_1538 bf0e2087dca0c3dcaadf3c7d157a2769 2322 TIGRFAM TIGR01168 YSIRK_signal: gram-positive signal peptide, YSIRK family 1 39 6.1E-15 T 26-04-2016 IPR005877 YSIRK Gram-positive signal peptide GO:0016020 smi_1538 bf0e2087dca0c3dcaadf3c7d157a2769 2322 SUPERFAMILY SSF49785 1801 1934 2.47E-17 T 26-04-2016 IPR008979 Galactose-binding domain-like smi_1538 bf0e2087dca0c3dcaadf3c7d157a2769 2322 PRINTS PR00839 V8 serine protease family signature 265 278 5.0E-6 T 26-04-2016 IPR008256 Peptidase S1B GO:0006508|GO:0008236 smi_1538 bf0e2087dca0c3dcaadf3c7d157a2769 2322 PRINTS PR00839 V8 serine protease family signature 316 328 5.0E-6 T 26-04-2016 IPR008256 Peptidase S1B GO:0006508|GO:0008236 smi_1538 bf0e2087dca0c3dcaadf3c7d157a2769 2322 PRINTS PR00839 V8 serine protease family signature 167 184 5.0E-6 T 26-04-2016 IPR008256 Peptidase S1B GO:0006508|GO:0008236 smi_1538 bf0e2087dca0c3dcaadf3c7d157a2769 2322 Pfam PF13365 Trypsin-like peptidase domain 167 324 1.4E-12 T 26-04-2016 smi_1538 bf0e2087dca0c3dcaadf3c7d157a2769 2322 PRINTS PR01774 Exfoliative toxin signature 257 275 4.7E-8 T 26-04-2016 IPR008353 Peptidase S1B, exfoliative toxin GO:0004252|GO:0006508 smi_1538 bf0e2087dca0c3dcaadf3c7d157a2769 2322 PRINTS PR01774 Exfoliative toxin signature 301 325 4.7E-8 T 26-04-2016 IPR008353 Peptidase S1B, exfoliative toxin GO:0004252|GO:0006508 smi_1538 bf0e2087dca0c3dcaadf3c7d157a2769 2322 TIGRFAM TIGR01167 LPXTG_anchor: LPXTG cell wall anchor domain 2289 2321 0.0017 T 26-04-2016 IPR019931 LPXTG cell wall anchor domain smi_1538 bf0e2087dca0c3dcaadf3c7d157a2769 2322 Pfam PF04650 YSIRK type signal peptide 7 32 7.7E-12 T 26-04-2016 IPR005877 YSIRK Gram-positive signal peptide GO:0016020 smi_0599 62ff8e6fda54006dfd8b3299b7148082 183 Pfam PF13302 Acetyltransferase (GNAT) domain 13 154 3.2E-29 T 26-04-2016 IPR000182 GNAT domain GO:0008080 smi_0599 62ff8e6fda54006dfd8b3299b7148082 183 PANTHER PTHR13256 9 182 3.8E-44 T 26-04-2016 smi_0599 62ff8e6fda54006dfd8b3299b7148082 183 SUPERFAMILY SSF55729 7 178 1.12E-40 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase smi_0599 62ff8e6fda54006dfd8b3299b7148082 183 PANTHER PTHR13256:SF10 9 182 3.8E-44 T 26-04-2016 smi_0599 62ff8e6fda54006dfd8b3299b7148082 183 Gene3D G3DSA:3.40.630.30 4 178 5.4E-47 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase smi_0529 756bc56f6a76f438b7d0144b839c71ce 128 Gene3D G3DSA:3.10.180.10 1 128 9.1E-45 T 26-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase smi_0529 756bc56f6a76f438b7d0144b839c71ce 128 SUPERFAMILY SSF54593 6 127 3.89E-21 T 26-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase smi_0529 756bc56f6a76f438b7d0144b839c71ce 128 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 10 124 1.8E-5 T 26-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain smi_1384 7c34a72616da3d597283475fb7cb39ca 172 SUPERFAMILY SSF53155 6 88 1.18E-14 T 26-04-2016 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 smi_1384 7c34a72616da3d597283475fb7cb39ca 172 Gene3D G3DSA:1.10.10.10 82 167 3.4E-34 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain smi_1384 7c34a72616da3d597283475fb7cb39ca 172 PANTHER PTHR10815 9 172 1.0E-46 T 26-04-2016 smi_1384 7c34a72616da3d597283475fb7cb39ca 172 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 132 138 - T 26-04-2016 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 smi_1384 7c34a72616da3d597283475fb7cb39ca 172 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 83 161 4.1E-29 T 26-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 smi_1384 7c34a72616da3d597283475fb7cb39ca 172 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 84 163 8.1E-31 T 26-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 smi_1384 7c34a72616da3d597283475fb7cb39ca 172 SUPERFAMILY SSF46767 82 163 2.62E-27 T 26-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 smi_1384 7c34a72616da3d597283475fb7cb39ca 172 PANTHER PTHR10815:SF5 9 172 1.0E-46 T 26-04-2016 smi_0212 49260133afb13eab2a7a9b3f4a7b8c16 136 SUPERFAMILY SSF53335 5 122 1.24E-29 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase smi_0212 49260133afb13eab2a7a9b3f4a7b8c16 136 Pfam PF13649 Methyltransferase domain 40 120 3.1E-18 T 26-04-2016 smi_0212 49260133afb13eab2a7a9b3f4a7b8c16 136 PANTHER PTHR10108 26 121 3.3E-21 T 26-04-2016 smi_0212 49260133afb13eab2a7a9b3f4a7b8c16 136 Gene3D G3DSA:3.40.50.150 2 121 4.4E-28 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase smi_0625 9cf63ea1ab135d2361c69b58230ca4ab 261 PANTHER PTHR32219:SF5 1 261 2.2E-71 T 26-04-2016 smi_0625 9cf63ea1ab135d2361c69b58230ca4ab 261 SMART SM00363 183 245 5.6E-14 T 26-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 smi_0625 9cf63ea1ab135d2361c69b58230ca4ab 261 PANTHER PTHR32219 1 261 2.2E-71 T 26-04-2016 smi_0625 9cf63ea1ab135d2361c69b58230ca4ab 261 SUPERFAMILY SSF55174 37 128 6.61E-29 T 26-04-2016 smi_0625 9cf63ea1ab135d2361c69b58230ca4ab 261 SUPERFAMILY SSF55174 180 252 6.61E-29 T 26-04-2016 smi_0625 9cf63ea1ab135d2361c69b58230ca4ab 261 Pfam PF01479 S4 domain 184 229 1.6E-8 T 26-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 smi_0625 9cf63ea1ab135d2361c69b58230ca4ab 261 Gene3D G3DSA:3.10.290.10 182 236 3.4E-17 T 26-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 smi_1756 4f856d8e69eeba33fb53a0461cf9db54 198 PIRSF PIRSF037785 18 198 2.3E-77 T 26-04-2016 IPR004612 Holliday junction resolvase RecU GO:0005737|GO:0006281|GO:0006310 smi_1756 4f856d8e69eeba33fb53a0461cf9db54 198 TIGRFAM TIGR00648 recU: recombination protein U 25 189 8.5E-59 T 26-04-2016 IPR004612 Holliday junction resolvase RecU GO:0005737|GO:0006281|GO:0006310 smi_1756 4f856d8e69eeba33fb53a0461cf9db54 198 SUPERFAMILY SSF52980 28 191 8.31E-64 T 26-04-2016 IPR011335 Restriction endonuclease type II-like smi_1756 4f856d8e69eeba33fb53a0461cf9db54 198 Gene3D G3DSA:3.40.1350.10 27 192 3.2E-74 T 26-04-2016 IPR011856 tRNA endonuclease-like domain GO:0003676|GO:0004518 smi_1756 4f856d8e69eeba33fb53a0461cf9db54 198 Pfam PF03838 Recombination protein U 26 188 1.3E-64 T 26-04-2016 IPR004612 Holliday junction resolvase RecU GO:0005737|GO:0006281|GO:0006310 smi_1756 4f856d8e69eeba33fb53a0461cf9db54 198 PANTHER PTHR41275 1 198 4.0E-108 T 26-04-2016 smi_1756 4f856d8e69eeba33fb53a0461cf9db54 198 Hamap MF_00130 Holliday junction resolvase RecU [recU]. 1 198 94.899 T 26-04-2016 IPR004612 Holliday junction resolvase RecU GO:0005737|GO:0006281|GO:0006310 smi_0053 bbf1285585b5da7d52641f8639942498 330 PANTHER PTHR30100 1 327 1.4E-130 T 26-04-2016 smi_0053 bbf1285585b5da7d52641f8639942498 330 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 3 327 1.5E-116 T 26-04-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 smi_0053 bbf1285585b5da7d52641f8639942498 330 PIRSF PIRSF002465 1 330 1.0E-124 T 26-04-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 smi_0053 bbf1285585b5da7d52641f8639942498 330 SUPERFAMILY SSF53659 1 328 2.1E-101 T 26-04-2016 smi_0053 bbf1285585b5da7d52641f8639942498 330 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 330 147.446 T 26-04-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 smi_0053 bbf1285585b5da7d52641f8639942498 330 Gene3D G3DSA:3.40.718.10 1 327 1.6E-132 T 26-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 smi_0053 bbf1285585b5da7d52641f8639942498 330 Pfam PF02504 Fatty acid synthesis protein 3 320 6.8E-107 T 26-04-2016 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 UniPathway: UPA00085 smi_0053 bbf1285585b5da7d52641f8639942498 330 PANTHER PTHR30100:SF1 1 327 1.4E-130 T 26-04-2016 smi_1853 a5a7a6806668f65413ccce667fe2caf9 419 Gene3D G3DSA:2.30.42.10 166 272 2.8E-11 T 26-04-2016 IPR001478 PDZ domain GO:0005515 smi_1853 a5a7a6806668f65413ccce667fe2caf9 419 Pfam PF02163 Peptidase family M50 6 404 2.2E-78 T 26-04-2016 IPR008915 Peptidase M50 GO:0004222|GO:0006508 smi_1853 a5a7a6806668f65413ccce667fe2caf9 419 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 4 418 2.3E-69 T 26-04-2016 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 smi_1853 a5a7a6806668f65413ccce667fe2caf9 419 PANTHER PTHR22939 207 418 3.6E-65 T 26-04-2016 smi_1853 a5a7a6806668f65413ccce667fe2caf9 419 PANTHER PTHR22939:SF78 207 418 3.6E-65 T 26-04-2016 smi_1015 234b52b66ad325869a3baeb8e44747c4 70 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 6 62 6.1E-21 T 26-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 smi_1015 234b52b66ad325869a3baeb8e44747c4 70 SUPERFAMILY SSF116842 3 68 8.24E-18 T 26-04-2016 smi_1015 234b52b66ad325869a3baeb8e44747c4 70 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 1 48 1.0E-19 T 26-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 smi_1015 234b52b66ad325869a3baeb8e44747c4 70 PANTHER PTHR34137 1 70 3.2E-22 T 26-04-2016 smi_1015 234b52b66ad325869a3baeb8e44747c4 70 PIRSF PIRSF006488 1 70 1.4E-18 T 26-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 smi_1015 234b52b66ad325869a3baeb8e44747c4 70 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 6 66 14.386 T 26-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 smi_1015 234b52b66ad325869a3baeb8e44747c4 70 Gene3D G3DSA:1.10.287.1040 3 68 1.3E-22 T 26-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 smi_1015 234b52b66ad325869a3baeb8e44747c4 70 Pfam PF02609 Exonuclease VII small subunit 7 56 1.8E-18 T 26-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 smi_0265 c0f8a0915abf69f99df1e062b4860147 92 PIRSF PIRSF006156 1 92 1.6E-32 T 26-04-2016 IPR004386 Toxin-antitoxin system, YafQ-like toxin smi_0265 c0f8a0915abf69f99df1e062b4860147 92 SUPERFAMILY SSF143011 3 92 1.31E-21 T 26-04-2016 smi_0265 c0f8a0915abf69f99df1e062b4860147 92 PANTHER PTHR40588 1 92 2.2E-33 T 26-04-2016 smi_0265 c0f8a0915abf69f99df1e062b4860147 92 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 4 92 2.1E-29 T 26-04-2016 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family smi_0265 c0f8a0915abf69f99df1e062b4860147 92 Pfam PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ 3 92 1.3E-31 T 26-04-2016 IPR004386 Toxin-antitoxin system, YafQ-like toxin smi_1665 71e22ad724ebef1e500f23ee0f5b6406 100 PANTHER PTHR15004 1 96 5.6E-32 T 26-04-2016 smi_1665 71e22ad724ebef1e500f23ee0f5b6406 100 TIGRFAM TIGR00135 gatC: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit 3 95 2.4E-29 T 26-04-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 smi_1665 71e22ad724ebef1e500f23ee0f5b6406 100 SUPERFAMILY SSF141000 2 93 1.22E-26 T 26-04-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 smi_1665 71e22ad724ebef1e500f23ee0f5b6406 100 PANTHER PTHR15004:SF0 1 96 5.6E-32 T 26-04-2016 smi_1665 71e22ad724ebef1e500f23ee0f5b6406 100 Pfam PF02686 Glu-tRNAGln amidotransferase C subunit 19 90 3.9E-18 T 26-04-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 smi_1665 71e22ad724ebef1e500f23ee0f5b6406 100 Hamap MF_00122 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C [gatC]. 2 95 24.133 T 26-04-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 smi_0651 2ea29426c222dfd0a9931d933843f148 503 PANTHER PTHR24220 316 502 9.7E-26 T 26-04-2016 smi_0651 2ea29426c222dfd0a9931d933843f148 503 Gene3D G3DSA:1.20.1560.10 2 287 2.6E-28 T 26-04-2016 smi_0651 2ea29426c222dfd0a9931d933843f148 503 Pfam PF00005 ABC transporter 333 452 4.6E-19 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 smi_0651 2ea29426c222dfd0a9931d933843f148 503 SMART SM00382 338 498 3.0E-12 T 26-04-2016 IPR003593 AAA+ ATPase domain smi_0651 2ea29426c222dfd0a9931d933843f148 503 SUPERFAMILY SSF90123 2 298 3.27E-30 T 26-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 smi_0651 2ea29426c222dfd0a9931d933843f148 503 Pfam PF00664 ABC transporter transmembrane region 14 274 7.2E-12 T 26-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 smi_0651 2ea29426c222dfd0a9931d933843f148 503 SUPERFAMILY SSF52540 314 500 2.6E-34 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0651 2ea29426c222dfd0a9931d933843f148 503 PANTHER PTHR24220:SF70 316 502 9.7E-26 T 26-04-2016 smi_0651 2ea29426c222dfd0a9931d933843f148 503 Gene3D G3DSA:3.40.50.300 315 500 2.3E-31 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0959 952796d41509d16533cb8f67d6f6659d 185 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 96 180 3.3E-36 T 26-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 smi_0959 952796d41509d16533cb8f67d6f6659d 185 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 13 183 29.596 T 26-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 smi_0959 952796d41509d16533cb8f67d6f6659d 185 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 20 89 2.1E-28 T 26-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 smi_0959 952796d41509d16533cb8f67d6f6659d 185 SUPERFAMILY SSF54364 18 91 4.58E-28 T 26-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 smi_0959 952796d41509d16533cb8f67d6f6659d 185 ProSitePatterns PS00938 Initiation factor 3 signature. 71 84 - T 26-04-2016 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 smi_0959 952796d41509d16533cb8f67d6f6659d 185 SUPERFAMILY SSF55200 95 183 5.49E-32 T 26-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 smi_0959 952796d41509d16533cb8f67d6f6659d 185 Gene3D G3DSA:3.30.110.10 92 184 1.0E-36 T 26-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 smi_0959 952796d41509d16533cb8f67d6f6659d 185 PANTHER PTHR10938 13 185 4.6E-65 T 26-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 smi_0959 952796d41509d16533cb8f67d6f6659d 185 Gene3D G3DSA:3.10.20.80 15 91 1.8E-33 T 26-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 smi_0959 952796d41509d16533cb8f67d6f6659d 185 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 20 181 1.6E-64 T 26-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 smi_1257 a6e4cfbf259c9797888266962a226f42 404 PANTHER PTHR23513 3 392 3.2E-49 T 26-04-2016 smi_1257 a6e4cfbf259c9797888266962a226f42 404 SUPERFAMILY SSF103473 5 391 3.92E-41 T 26-04-2016 IPR020846 Major facilitator superfamily domain smi_1257 a6e4cfbf259c9797888266962a226f42 404 Pfam PF07690 Major Facilitator Superfamily 13 322 1.3E-25 T 26-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 smi_1257 a6e4cfbf259c9797888266962a226f42 404 Gene3D G3DSA:1.20.1250.20 215 385 8.8E-10 T 26-04-2016 smi_1257 a6e4cfbf259c9797888266962a226f42 404 Gene3D G3DSA:1.20.1250.20 6 193 9.1E-17 T 26-04-2016 smi_1257 a6e4cfbf259c9797888266962a226f42 404 PANTHER PTHR23513:SF11 3 392 3.2E-49 T 26-04-2016 smi_0829 5760ddf36ab19bf1ca7f055985be0b6b 172 Pfam PF01782 RimM N-terminal domain 6 90 5.3E-19 T 26-04-2016 IPR002676 RimM protein GO:0006364 smi_0829 5760ddf36ab19bf1ca7f055985be0b6b 172 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 3 168 23.037 T 26-04-2016 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 smi_0829 5760ddf36ab19bf1ca7f055985be0b6b 172 SUPERFAMILY SSF50447 2 91 1.34E-18 T 26-04-2016 IPR009000 Translation protein, beta-barrel domain smi_0829 5760ddf36ab19bf1ca7f055985be0b6b 172 PANTHER PTHR33692 2 172 4.9E-55 T 26-04-2016 smi_0829 5760ddf36ab19bf1ca7f055985be0b6b 172 Gene3D G3DSA:2.40.30.60 3 91 9.1E-13 T 26-04-2016 IPR002676 RimM protein GO:0006364 smi_0829 5760ddf36ab19bf1ca7f055985be0b6b 172 SUPERFAMILY SSF50346 99 168 1.59E-17 T 26-04-2016 IPR011033 PRC-barrel-like smi_0829 5760ddf36ab19bf1ca7f055985be0b6b 172 Pfam PF05239 PRC-barrel domain 97 167 2.5E-11 T 26-04-2016 IPR027275 PRC-barrel domain smi_0829 5760ddf36ab19bf1ca7f055985be0b6b 172 Gene3D G3DSA:2.30.30.240 99 168 1.2E-21 T 26-04-2016 smi_0829 5760ddf36ab19bf1ca7f055985be0b6b 172 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 4 167 2.5E-49 T 26-04-2016 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 smi_1398 52b2c10014c896dffdb8ac8d9b6d12c1 1699 Pfam PF02225 PA domain 427 503 9.3E-14 T 26-04-2016 IPR003137 PA domain smi_1398 52b2c10014c896dffdb8ac8d9b6d12c1 1699 PANTHER PTHR10795 210 640 1.6E-68 T 26-04-2016 IPR015500 Peptidase S8, subtilisin-related smi_1398 52b2c10014c896dffdb8ac8d9b6d12c1 1699 PANTHER PTHR10795 143 188 1.6E-68 T 26-04-2016 IPR015500 Peptidase S8, subtilisin-related smi_1398 52b2c10014c896dffdb8ac8d9b6d12c1 1699 Pfam PF00082 Subtilase family 166 630 1.5E-58 T 26-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 smi_1398 52b2c10014c896dffdb8ac8d9b6d12c1 1699 Pfam PF06280 Fn3-like domain 653 763 1.4E-24 T 26-04-2016 IPR010435 Fn3-like domain GO:0004252|GO:0005618|GO:0016020 smi_1398 52b2c10014c896dffdb8ac8d9b6d12c1 1699 PANTHER PTHR10795:SF419 210 640 1.6E-68 T 26-04-2016 smi_1398 52b2c10014c896dffdb8ac8d9b6d12c1 1699 PANTHER PTHR10795:SF419 143 188 1.6E-68 T 26-04-2016 smi_1398 52b2c10014c896dffdb8ac8d9b6d12c1 1699 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 567 577 - T 26-04-2016 IPR023828 Peptidase S8, subtilisin, Ser-active site smi_1398 52b2c10014c896dffdb8ac8d9b6d12c1 1699 PRINTS PR00723 Subtilisin serine protease family (S8) signature 566 582 4.7E-17 T 26-04-2016 IPR015500 Peptidase S8, subtilisin-related smi_1398 52b2c10014c896dffdb8ac8d9b6d12c1 1699 PRINTS PR00723 Subtilisin serine protease family (S8) signature 166 185 4.7E-17 T 26-04-2016 IPR015500 Peptidase S8, subtilisin-related smi_1398 52b2c10014c896dffdb8ac8d9b6d12c1 1699 PRINTS PR00723 Subtilisin serine protease family (S8) signature 237 250 4.7E-17 T 26-04-2016 IPR015500 Peptidase S8, subtilisin-related smi_1398 52b2c10014c896dffdb8ac8d9b6d12c1 1699 SUPERFAMILY SSF52025 416 577 1.06E-20 T 26-04-2016 smi_1398 52b2c10014c896dffdb8ac8d9b6d12c1 1699 Gene3D G3DSA:1.20.5.420 1386 1453 2.1E-6 T 26-04-2016 smi_1398 52b2c10014c896dffdb8ac8d9b6d12c1 1699 Gene3D G3DSA:1.20.5.420 1246 1309 2.4E-5 T 26-04-2016 smi_1398 52b2c10014c896dffdb8ac8d9b6d12c1 1699 Gene3D G3DSA:1.20.5.420 1314 1381 2.1E-6 T 26-04-2016 smi_1398 52b2c10014c896dffdb8ac8d9b6d12c1 1699 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 241 251 - T 26-04-2016 IPR022398 Peptidase S8, subtilisin, His-active site smi_1398 52b2c10014c896dffdb8ac8d9b6d12c1 1699 SUPERFAMILY SSF52743 221 385 2.09E-70 T 26-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 smi_1398 52b2c10014c896dffdb8ac8d9b6d12c1 1699 SUPERFAMILY SSF52743 529 638 2.09E-70 T 26-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 smi_1398 52b2c10014c896dffdb8ac8d9b6d12c1 1699 SUPERFAMILY SSF52743 151 185 2.09E-70 T 26-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 smi_1398 52b2c10014c896dffdb8ac8d9b6d12c1 1699 Gene3D G3DSA:3.50.30.30 415 538 2.5E-30 T 26-04-2016 smi_1398 52b2c10014c896dffdb8ac8d9b6d12c1 1699 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 171 182 - T 26-04-2016 IPR023827 Peptidase S8, subtilisin, Asp-active site smi_1398 52b2c10014c896dffdb8ac8d9b6d12c1 1699 Gene3D G3DSA:3.40.50.200 152 391 3.5E-85 T 26-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 smi_1398 52b2c10014c896dffdb8ac8d9b6d12c1 1699 Gene3D G3DSA:3.40.50.200 539 637 3.5E-85 T 26-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 smi_1517 45558c051e1f44a3547cfb66a47dda0a 98 SUPERFAMILY SSF82771 4 75 5.75E-14 T 26-04-2016 IPR000305 GIY-YIG nuclease superfamily smi_1517 45558c051e1f44a3547cfb66a47dda0a 98 Pfam PF01541 GIY-YIG catalytic domain 5 76 5.5E-18 T 26-04-2016 IPR000305 GIY-YIG nuclease superfamily smi_1517 45558c051e1f44a3547cfb66a47dda0a 98 PANTHER PTHR34477 1 95 4.8E-39 T 26-04-2016 smi_1517 45558c051e1f44a3547cfb66a47dda0a 98 PANTHER PTHR34477:SF1 1 95 4.8E-39 T 26-04-2016 smi_1814 7b535b0f422209474d120162db4b3e20 479 PANTHER PTHR32024 1 479 4.4E-214 T 26-04-2016 smi_1814 7b535b0f422209474d120162db4b3e20 479 PIRSF PIRSF006247 1 478 1.5E-127 T 26-04-2016 IPR004772 TrkH potassium transport family GO:0016021|GO:0022820|GO:0071805 smi_1814 7b535b0f422209474d120162db4b3e20 479 Pfam PF02386 Cation transport protein 50 473 2.5E-46 T 26-04-2016 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 smi_1814 7b535b0f422209474d120162db4b3e20 479 PANTHER PTHR32024:SF2 1 479 4.4E-214 T 26-04-2016 smi_1640 592e283369cd08a4cb7183e7decfc6be 175 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 29 139 1.8E-20 T 26-04-2016 IPR006549 HAD-superfamily hydrolase,subfamily IIIA smi_1640 592e283369cd08a4cb7183e7decfc6be 175 Gene3D G3DSA:3.40.50.1000 13 158 1.8E-31 T 26-04-2016 IPR023214 HAD-like domain smi_1640 592e283369cd08a4cb7183e7decfc6be 175 TIGRFAM TIGR01668 YqeG_hyp_ppase: HAD phosphatase, family IIIA 6 169 3.4E-41 T 26-04-2016 IPR010021 HAD-superfamily phosphatase, YqeG-like smi_1640 592e283369cd08a4cb7183e7decfc6be 175 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 60 131 3.9E-6 T 26-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 smi_1640 592e283369cd08a4cb7183e7decfc6be 175 SUPERFAMILY SSF56784 4 147 6.4E-30 T 26-04-2016 IPR023214 HAD-like domain smi_1640 592e283369cd08a4cb7183e7decfc6be 175 Pfam PF13419 Haloacid dehalogenase-like hydrolase 48 137 7.3E-16 T 26-04-2016 IPR023214 HAD-like domain smi_1640 592e283369cd08a4cb7183e7decfc6be 175 PANTHER PTHR19288:SF25 7 160 3.4E-43 T 26-04-2016 smi_1640 592e283369cd08a4cb7183e7decfc6be 175 PANTHER PTHR19288 7 160 3.4E-43 T 26-04-2016 smi_1794 c46ea5bc3be5631ab40c74364b842cfa 89 SUPERFAMILY SSF46955 38 85 5.49E-10 T 26-04-2016 IPR009061 Putative DNA-binding domain smi_1794 c46ea5bc3be5631ab40c74364b842cfa 89 Pfam PF12728 Helix-turn-helix domain 41 86 2.8E-11 T 26-04-2016 smi_1794 c46ea5bc3be5631ab40c74364b842cfa 89 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 43 83 3.5E-9 T 26-04-2016 IPR010093 SinI-like, DNA-binding domain GO:0003677 smi_1794 c46ea5bc3be5631ab40c74364b842cfa 89 Gene3D G3DSA:1.10.10.10 37 87 7.0E-20 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain smi_1157 33b157eb4281cd4b17fa567718bf5f8c 419 SUPERFAMILY SSF55205 1 418 3.11E-131 T 26-04-2016 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 smi_1157 33b157eb4281cd4b17fa567718bf5f8c 419 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 8 407 5.3E-88 T 26-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 smi_1157 33b157eb4281cd4b17fa567718bf5f8c 419 PANTHER PTHR21090 1 419 3.2E-174 T 26-04-2016 smi_1157 33b157eb4281cd4b17fa567718bf5f8c 419 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 417 41.266 T 26-04-2016 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 smi_1157 33b157eb4281cd4b17fa567718bf5f8c 419 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 415 2.1E-151 T 26-04-2016 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 smi_1157 33b157eb4281cd4b17fa567718bf5f8c 419 Gene3D G3DSA:3.65.10.10 222 416 2.4E-58 T 26-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 smi_1157 33b157eb4281cd4b17fa567718bf5f8c 419 Gene3D G3DSA:3.65.10.10 21 221 1.0E-58 T 26-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 smi_1599 6f02d71e382ef47cdc7bd8ac4ffa639f 288 SUPERFAMILY SSF51730 3 279 2.94E-77 T 26-04-2016 IPR029041 FAD-linked oxidoreductase-like smi_1599 6f02d71e382ef47cdc7bd8ac4ffa639f 288 Pfam PF02219 Methylenetetrahydrofolate reductase 4 276 3.4E-72 T 26-04-2016 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 smi_1599 6f02d71e382ef47cdc7bd8ac4ffa639f 288 PANTHER PTHR21091:SF31 136 268 4.5E-28 T 26-04-2016 smi_1599 6f02d71e382ef47cdc7bd8ac4ffa639f 288 PANTHER PTHR21091 136 268 4.5E-28 T 26-04-2016 smi_1599 6f02d71e382ef47cdc7bd8ac4ffa639f 288 TIGRFAM TIGR00676 fadh2: methylenetetrahydrofolate reductase [NAD(P)H] 8 277 1.3E-101 T 26-04-2016 IPR004620 5,10-methylenetetrahydrofolate reductase GO:0004489|GO:0005829|GO:0009086|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 smi_1599 6f02d71e382ef47cdc7bd8ac4ffa639f 288 Gene3D G3DSA:3.20.20.220 2 279 6.0E-89 T 26-04-2016 IPR029041 FAD-linked oxidoreductase-like smi_1038 4ab258c2bbd6c64c453f53c0d75eeaf9 563 PANTHER PTHR33989:SF6 1 439 1.4E-267 T 26-04-2016 smi_1038 4ab258c2bbd6c64c453f53c0d75eeaf9 563 Gene3D G3DSA:3.40.50.270 460 562 2.8E-21 T 26-04-2016 smi_1038 4ab258c2bbd6c64c453f53c0d75eeaf9 563 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 463 531 2.4E-9 T 26-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 smi_1038 4ab258c2bbd6c64c453f53c0d75eeaf9 563 TIGRFAM TIGR00853 pts-lac: PTS system, lactose/cellobiose family IIB component 420 557 8.3E-59 T 26-04-2016 IPR013012 Phosphotransferase system, EIIB component, type 3 GO:0008982|GO:0009401 smi_1038 4ab258c2bbd6c64c453f53c0d75eeaf9 563 SUPERFAMILY SSF52794 462 562 6.54E-18 T 26-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 smi_1038 4ab258c2bbd6c64c453f53c0d75eeaf9 563 Pfam PF02378 Phosphotransferase system, EIIC 28 347 1.3E-65 T 26-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 smi_1038 4ab258c2bbd6c64c453f53c0d75eeaf9 563 TIGRFAM TIGR00394 lac_pts_IIC: PTS system, lactose-specific IIC component 11 421 5.6E-221 T 26-04-2016 IPR004801 Phosphotransferase system, lactose-specific IIC component GO:0008982|GO:0016021|GO:0022869 smi_1038 4ab258c2bbd6c64c453f53c0d75eeaf9 563 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 13 421 4.5E-74 T 26-04-2016 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 smi_1038 4ab258c2bbd6c64c453f53c0d75eeaf9 563 PANTHER PTHR33989 1 439 1.4E-267 T 26-04-2016 smi_1042 5087bb2fd7c2a125bf56c17788c06275 321 Gene3D G3DSA:1.10.620.20 5 281 3.5E-88 T 26-04-2016 IPR012348 Ribonucleotide reductase-related GO:0016491|GO:0055114 Reactome: REACT_1698 smi_1042 5087bb2fd7c2a125bf56c17788c06275 321 TIGRFAM TIGR04171 RNR_1b_NrdF: ribonucleoside-diphosphate reductase, class 1b, beta subunit 6 317 1.5E-150 T 26-04-2016 IPR026494 Ribonucleoside reductase subunit beta, NrdF GO:0005971|GO:0009263 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 smi_1042 5087bb2fd7c2a125bf56c17788c06275 321 PANTHER PTHR23409 9 319 5.4E-94 T 26-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 smi_1042 5087bb2fd7c2a125bf56c17788c06275 321 SUPERFAMILY SSF47240 4 317 2.91E-100 T 26-04-2016 IPR009078 Ferritin-like superfamily smi_1042 5087bb2fd7c2a125bf56c17788c06275 321 Pfam PF00268 Ribonucleotide reductase, small chain 9 280 4.1E-86 T 26-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 smi_1042 5087bb2fd7c2a125bf56c17788c06275 321 PIRSF PIRSF000355 1 315 1.5E-74 T 26-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 smi_1482 d0e462552e4c925ecd5ba70ff6953d3d 1969 TIGRFAM TIGR01168 YSIRK_signal: gram-positive signal peptide, YSIRK family 3 37 1.5E-7 T 26-04-2016 IPR005877 YSIRK Gram-positive signal peptide GO:0016020 smi_1482 d0e462552e4c925ecd5ba70ff6953d3d 1969 Pfam PF04650 YSIRK type signal peptide 9 34 4.8E-10 T 26-04-2016 IPR005877 YSIRK Gram-positive signal peptide GO:0016020 smi_1482 d0e462552e4c925ecd5ba70ff6953d3d 1969 Pfam PF07580 M26 IgA1-specific Metallo-endopeptidase C-terminal region 1234 1968 2.4E-279 T 26-04-2016 IPR011505 Peptidase M26, C-terminal domain GO:0004222|GO:0005576|GO:0005618|GO:0008270 smi_1482 d0e462552e4c925ecd5ba70ff6953d3d 1969 Pfam PF07501 G5 domain 459 531 8.6E-12 T 26-04-2016 IPR011098 G5 domain smi_1482 d0e462552e4c925ecd5ba70ff6953d3d 1969 Pfam PF07501 G5 domain 539 611 1.5E-12 T 26-04-2016 IPR011098 G5 domain smi_1482 d0e462552e4c925ecd5ba70ff6953d3d 1969 Pfam PF07501 G5 domain 262 334 3.0E-18 T 26-04-2016 IPR011098 G5 domain smi_1482 d0e462552e4c925ecd5ba70ff6953d3d 1969 SMART SM01208 254 335 1.5E-21 T 26-04-2016 IPR011098 G5 domain smi_1482 d0e462552e4c925ecd5ba70ff6953d3d 1969 SMART SM01208 453 532 2.3E-10 T 26-04-2016 IPR011098 G5 domain smi_1482 d0e462552e4c925ecd5ba70ff6953d3d 1969 SMART SM01208 533 612 2.0E-16 T 26-04-2016 IPR011098 G5 domain smi_1482 d0e462552e4c925ecd5ba70ff6953d3d 1969 Pfam PF05342 M26 IgA1-specific Metallo-endopeptidase N-terminal region 676 924 1.1E-97 T 26-04-2016 IPR008006 Peptidase M26, N-terminal domain GO:0004222|GO:0008270|GO:0016021 smi_1034 1d56689d25277161f4df2896643ef270 143 Gene3D G3DSA:3.40.50.150 8 142 5.4E-23 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase smi_1034 1d56689d25277161f4df2896643ef270 143 SUPERFAMILY SSF53335 3 141 1.1E-12 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase smi_0977 7387ab59c485e2bc687ffbf5d83abfa5 155 Hamap MF_00023 SsrA-binding protein [smpB]. 1 155 72.061 T 26-04-2016 IPR000037 SsrA-binding protein GO:0003723 smi_0977 7387ab59c485e2bc687ffbf5d83abfa5 155 PANTHER PTHR30308:SF2 1 155 2.3E-81 T 26-04-2016 smi_0977 7387ab59c485e2bc687ffbf5d83abfa5 155 SUPERFAMILY SSF74982 4 132 2.49E-50 T 26-04-2016 IPR023620 Small protein B smi_0977 7387ab59c485e2bc687ffbf5d83abfa5 155 ProSitePatterns PS01317 SsrA-binding protein. 27 39 - T 26-04-2016 IPR020081 SsrA-binding protein, conserved site smi_0977 7387ab59c485e2bc687ffbf5d83abfa5 155 TIGRFAM TIGR00086 smpB: SsrA-binding protein 9 150 4.3E-58 T 26-04-2016 IPR000037 SsrA-binding protein GO:0003723 smi_0977 7387ab59c485e2bc687ffbf5d83abfa5 155 Gene3D G3DSA:2.40.280.10 7 127 8.3E-52 T 26-04-2016 IPR023620 Small protein B smi_0977 7387ab59c485e2bc687ffbf5d83abfa5 155 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 9 132 4.0E-48 T 26-04-2016 IPR000037 SsrA-binding protein GO:0003723 smi_0977 7387ab59c485e2bc687ffbf5d83abfa5 155 PANTHER PTHR30308 1 155 2.3E-81 T 26-04-2016 smi_0977 7387ab59c485e2bc687ffbf5d83abfa5 155 Pfam PF01668 SmpB protein 8 72 6.1E-31 T 26-04-2016 IPR000037 SsrA-binding protein GO:0003723 smi_0973 c4b371f45555d72b6065802d37ec4340 399 Gene3D G3DSA:1.20.1250.20 9 196 1.4E-38 T 26-04-2016 smi_0973 c4b371f45555d72b6065802d37ec4340 399 Gene3D G3DSA:1.20.1250.20 214 388 6.3E-27 T 26-04-2016 smi_0973 c4b371f45555d72b6065802d37ec4340 399 Pfam PF00083 Sugar (and other) transporter 248 390 1.3E-9 T 26-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 smi_0973 c4b371f45555d72b6065802d37ec4340 399 PANTHER PTHR23504:SF14 1 387 1.7E-97 T 26-04-2016 smi_0973 c4b371f45555d72b6065802d37ec4340 399 SUPERFAMILY SSF103473 9 394 2.09E-68 T 26-04-2016 IPR020846 Major facilitator superfamily domain smi_0973 c4b371f45555d72b6065802d37ec4340 399 PRINTS PR01035 Tetracycline resistance protein signature 137 159 2.3E-10 T 26-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 smi_0973 c4b371f45555d72b6065802d37ec4340 399 PRINTS PR01035 Tetracycline resistance protein signature 324 347 2.3E-10 T 26-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 smi_0973 c4b371f45555d72b6065802d37ec4340 399 PRINTS PR01035 Tetracycline resistance protein signature 19 35 2.3E-10 T 26-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 smi_0973 c4b371f45555d72b6065802d37ec4340 399 PRINTS PR01035 Tetracycline resistance protein signature 107 128 2.3E-10 T 26-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 smi_0973 c4b371f45555d72b6065802d37ec4340 399 PRINTS PR01035 Tetracycline resistance protein signature 49 68 2.3E-10 T 26-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 smi_0973 c4b371f45555d72b6065802d37ec4340 399 Pfam PF07690 Major Facilitator Superfamily 14 243 6.6E-36 T 26-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 smi_0973 c4b371f45555d72b6065802d37ec4340 399 PANTHER PTHR23504 1 387 1.7E-97 T 26-04-2016 smi_1092 b530c3b68abab30ba75a37347c850925 767 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 242 365 1.2E-6 T 26-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 smi_1092 b530c3b68abab30ba75a37347c850925 767 Gene3D G3DSA:3.40.50.300 202 372 1.4E-31 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1092 b530c3b68abab30ba75a37347c850925 767 Pfam PF07724 AAA domain (Cdc48 subfamily) 572 745 9.7E-46 T 26-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 smi_1092 b530c3b68abab30ba75a37347c850925 767 SUPERFAMILY SSF52540 532 766 6.19E-53 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1092 b530c3b68abab30ba75a37347c850925 767 PANTHER PTHR11638 90 134 2.3E-170 T 26-04-2016 smi_1092 b530c3b68abab30ba75a37347c850925 767 Gene3D G3DSA:3.40.50.300 532 766 3.5E-44 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1092 b530c3b68abab30ba75a37347c850925 767 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 577 595 5.2E-32 T 26-04-2016 IPR001270 ClpA/B family GO:0005524 smi_1092 b530c3b68abab30ba75a37347c850925 767 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 651 669 5.2E-32 T 26-04-2016 IPR001270 ClpA/B family GO:0005524 smi_1092 b530c3b68abab30ba75a37347c850925 767 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 684 698 5.2E-32 T 26-04-2016 IPR001270 ClpA/B family GO:0005524 smi_1092 b530c3b68abab30ba75a37347c850925 767 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 622 640 5.2E-32 T 26-04-2016 IPR001270 ClpA/B family GO:0005524 smi_1092 b530c3b68abab30ba75a37347c850925 767 SMART SM00382 573 713 2.2E-9 T 26-04-2016 IPR003593 AAA+ ATPase domain smi_1092 b530c3b68abab30ba75a37347c850925 767 SMART SM00382 238 374 1.8E-6 T 26-04-2016 IPR003593 AAA+ ATPase domain smi_1092 b530c3b68abab30ba75a37347c850925 767 SUPERFAMILY SSF52540 199 458 6.45E-42 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1092 b530c3b68abab30ba75a37347c850925 767 PANTHER PTHR11638:SF18 166 766 2.3E-170 T 26-04-2016 smi_1092 b530c3b68abab30ba75a37347c850925 767 Gene3D G3DSA:1.10.8.60 374 457 1.0E-19 T 26-04-2016 smi_1092 b530c3b68abab30ba75a37347c850925 767 PANTHER PTHR11638 166 766 2.3E-170 T 26-04-2016 smi_1092 b530c3b68abab30ba75a37347c850925 767 PANTHER PTHR11638:SF18 90 134 2.3E-170 T 26-04-2016 smi_0092 e1fdf7c7f0a9cf58a52f70de810ec619 232 SMART SM00448 3 114 9.9E-42 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 smi_0092 e1fdf7c7f0a9cf58a52f70de810ec619 232 Gene3D G3DSA:3.40.50.2300 2 122 6.9E-38 T 26-04-2016 smi_0092 e1fdf7c7f0a9cf58a52f70de810ec619 232 Pfam PF00486 Transcriptional regulatory protein, C terminal 150 225 1.4E-23 T 26-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 smi_0092 e1fdf7c7f0a9cf58a52f70de810ec619 232 Gene3D G3DSA:1.10.10.10 126 227 2.3E-31 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain smi_0092 e1fdf7c7f0a9cf58a52f70de810ec619 232 SUPERFAMILY SSF52172 3 182 7.26E-41 T 26-04-2016 IPR011006 CheY-like superfamily smi_0092 e1fdf7c7f0a9cf58a52f70de810ec619 232 Pfam PF00072 Response regulator receiver domain 5 114 3.9E-28 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 smi_0092 e1fdf7c7f0a9cf58a52f70de810ec619 232 PANTHER PTHR26402 3 228 8.9E-118 T 26-04-2016 smi_0092 e1fdf7c7f0a9cf58a52f70de810ec619 232 PANTHER PTHR26402:SF614 3 228 8.9E-118 T 26-04-2016 smi_0092 e1fdf7c7f0a9cf58a52f70de810ec619 232 SMART SM00862 148 225 4.8E-21 T 26-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 smi_0766 1ccf271ab13b016d4a52bd33a2815ddd 436 PANTHER PTHR33392:SF6 26 433 1.3E-102 T 26-04-2016 smi_0766 1ccf271ab13b016d4a52bd33a2815ddd 436 TIGRFAM TIGR00350 lytR_cpsA_psr: cell envelope-related function transcriptional attenuator common domain 175 353 8.7E-23 T 26-04-2016 IPR004474 Cell envelope-related transcriptional attenuator domain smi_0766 1ccf271ab13b016d4a52bd33a2815ddd 436 Pfam PF03816 Cell envelope-related transcriptional attenuator domain 175 353 4.6E-48 T 26-04-2016 IPR004474 Cell envelope-related transcriptional attenuator domain smi_0766 1ccf271ab13b016d4a52bd33a2815ddd 436 PANTHER PTHR33392 26 433 1.3E-102 T 26-04-2016 smi_1191 119526ac7d9183d6a075e814a82d07d0 763 TIGRFAM TIGR01073 pcrA: ATP-dependent DNA helicase PcrA 4 760 0.0 T 26-04-2016 IPR005751 ATP-dependent DNA helicase PcrA GO:0004003|GO:0005737|GO:0006268 smi_1191 119526ac7d9183d6a075e814a82d07d0 763 Gene3D G3DSA:3.40.50.300 284 386 1.4E-69 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1191 119526ac7d9183d6a075e814a82d07d0 763 Gene3D G3DSA:3.40.50.300 554 644 1.4E-69 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1191 119526ac7d9183d6a075e814a82d07d0 763 Gene3D G3DSA:1.10.10.160 112 185 4.5E-26 T 26-04-2016 IPR013986 DExx box DNA helicase domain smi_1191 119526ac7d9183d6a075e814a82d07d0 763 Gene3D G3DSA:3.40.50.300 186 283 3.7E-72 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1191 119526ac7d9183d6a075e814a82d07d0 763 Gene3D G3DSA:3.40.50.300 2 107 3.7E-72 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1191 119526ac7d9183d6a075e814a82d07d0 763 Pfam PF13361 UvrD-like helicase C-terminal domain 276 618 2.9E-78 T 26-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 smi_1191 119526ac7d9183d6a075e814a82d07d0 763 SUPERFAMILY SSF52540 4 644 4.37E-174 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1191 119526ac7d9183d6a075e814a82d07d0 763 PANTHER PTHR11070:SF7 1 513 2.0E-236 T 26-04-2016 smi_1191 119526ac7d9183d6a075e814a82d07d0 763 PANTHER PTHR11070:SF7 679 761 2.0E-236 T 26-04-2016 smi_1191 119526ac7d9183d6a075e814a82d07d0 763 PANTHER PTHR11070:SF7 531 653 2.0E-236 T 26-04-2016 smi_1191 119526ac7d9183d6a075e814a82d07d0 763 PANTHER PTHR11070 1 513 2.0E-236 T 26-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 smi_1191 119526ac7d9183d6a075e814a82d07d0 763 PANTHER PTHR11070 679 761 2.0E-236 T 26-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 smi_1191 119526ac7d9183d6a075e814a82d07d0 763 PANTHER PTHR11070 531 653 2.0E-236 T 26-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 smi_1191 119526ac7d9183d6a075e814a82d07d0 763 Gene3D G3DSA:1.10.486.10 387 542 3.4E-46 T 26-04-2016 smi_1191 119526ac7d9183d6a075e814a82d07d0 763 Pfam PF00580 UvrD/REP helicase N-terminal domain 8 270 2.2E-79 T 26-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 smi_1274 68065254d193f5fd10ab91b1b539853c 56 Pfam PF02416 mttA/Hcf106 family 7 54 8.7E-18 T 26-04-2016 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 smi_1274 68065254d193f5fd10ab91b1b539853c 56 PANTHER PTHR33162 6 56 7.2E-13 T 26-04-2016 smi_1274 68065254d193f5fd10ab91b1b539853c 56 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 7 51 1.1E-15 T 26-04-2016 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 smi_1274 68065254d193f5fd10ab91b1b539853c 56 PANTHER PTHR33162:SF1 6 56 7.2E-13 T 26-04-2016 smi_0949 14ae5f551fc362fd4276881bd4315e71 245 SUPERFAMILY SSF53633 4 239 8.12E-71 T 26-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 smi_0949 14ae5f551fc362fd4276881bd4315e71 245 PIRSF PIRSF005650 1 245 1.4E-91 T 26-04-2016 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 smi_0949 14ae5f551fc362fd4276881bd4315e71 245 Gene3D G3DSA:3.40.1160.10 2 238 1.9E-83 T 26-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 smi_0949 14ae5f551fc362fd4276881bd4315e71 245 Pfam PF00696 Amino acid kinase family 7 217 3.7E-27 T 26-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 smi_0949 14ae5f551fc362fd4276881bd4315e71 245 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 6 237 1.4E-97 T 26-04-2016 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 smi_0949 14ae5f551fc362fd4276881bd4315e71 245 Hamap MF_01220_B Uridylate kinase [pyrH]. 4 238 43.703 T 26-04-2016 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 smi_0949 14ae5f551fc362fd4276881bd4315e71 245 PANTHER PTHR21499 3 243 1.5E-111 T 26-04-2016 smi_0949 14ae5f551fc362fd4276881bd4315e71 245 PANTHER PTHR21499:SF23 3 243 1.5E-111 T 26-04-2016 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 smi_1873 3bd62eed78992ad9a0bed66c06a254b5 230 SUPERFAMILY SSF53254 5 224 2.85E-51 T 26-04-2016 IPR029033 Histidine phosphatase superfamily smi_1873 3bd62eed78992ad9a0bed66c06a254b5 230 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 6 214 2.2E-34 T 26-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 smi_1873 3bd62eed78992ad9a0bed66c06a254b5 230 SMART SM00855 5 180 1.0E-20 T 26-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 smi_1873 3bd62eed78992ad9a0bed66c06a254b5 230 PANTHER PTHR23029 1 227 1.5E-102 T 26-04-2016 smi_1873 3bd62eed78992ad9a0bed66c06a254b5 230 PANTHER PTHR23029:SF29 1 227 1.5E-102 T 26-04-2016 smi_1873 3bd62eed78992ad9a0bed66c06a254b5 230 Gene3D G3DSA:3.40.50.1240 2 225 2.8E-53 T 26-04-2016 IPR029033 Histidine phosphatase superfamily smi_1894 07e3a9270931cf60a22c4cb96b9fd0af 101 Pfam PF00467 KOW motif 5 36 2.1E-6 T 26-04-2016 IPR005824 KOW smi_1894 07e3a9270931cf60a22c4cb96b9fd0af 101 Gene3D G3DSA:2.30.30.30 1 89 2.4E-21 T 26-04-2016 IPR014722 Ribosomal protein L2 domain 2 smi_1894 07e3a9270931cf60a22c4cb96b9fd0af 101 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 1 94 19.495 T 26-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_1894 07e3a9270931cf60a22c4cb96b9fd0af 101 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 3 99 7.1E-35 T 26-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_1894 07e3a9270931cf60a22c4cb96b9fd0af 101 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 38 99 2.1E-25 T 26-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_1894 07e3a9270931cf60a22c4cb96b9fd0af 101 SMART SM00739 2 29 1.9E-5 T 26-04-2016 IPR005824 KOW smi_1894 07e3a9270931cf60a22c4cb96b9fd0af 101 SUPERFAMILY SSF50104 2 99 1.09E-29 T 26-04-2016 IPR008991 Translation protein SH3-like domain smi_1894 07e3a9270931cf60a22c4cb96b9fd0af 101 ProSitePatterns PS01108 Ribosomal protein L24 signature. 6 23 - T 26-04-2016 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_1894 07e3a9270931cf60a22c4cb96b9fd0af 101 PANTHER PTHR12903 1 101 7.5E-41 T 26-04-2016 smi_1984 fd385f9e4d20bb6c3b63017fbe7adecc 388 PANTHER PTHR23523:SF2 2 387 2.3E-151 T 26-04-2016 smi_1984 fd385f9e4d20bb6c3b63017fbe7adecc 388 Pfam PF07690 Major Facilitator Superfamily 19 347 1.6E-25 T 26-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 smi_1984 fd385f9e4d20bb6c3b63017fbe7adecc 388 Gene3D G3DSA:1.20.1250.20 10 190 4.2E-14 T 26-04-2016 smi_1984 fd385f9e4d20bb6c3b63017fbe7adecc 388 Gene3D G3DSA:1.20.1250.20 200 380 7.6E-15 T 26-04-2016 smi_1984 fd385f9e4d20bb6c3b63017fbe7adecc 388 SUPERFAMILY SSF103473 3 382 7.46E-41 T 26-04-2016 IPR020846 Major facilitator superfamily domain smi_1984 fd385f9e4d20bb6c3b63017fbe7adecc 388 PANTHER PTHR23523 2 387 2.3E-151 T 26-04-2016 smi_1608 f4eba0b46290aca3eb307f990a5b6806 327 Gene3D G3DSA:1.10.10.10 17 55 4.4E-4 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain smi_1608 f4eba0b46290aca3eb307f990a5b6806 327 PANTHER PTHR35810 1 320 2.2E-147 T 26-04-2016 smi_1608 f4eba0b46290aca3eb307f990a5b6806 327 PIRSF PIRSF015268 1 327 2.4E-139 T 26-04-2016 IPR011204 Virulence protein RhuM-like smi_1608 f4eba0b46290aca3eb307f990a5b6806 327 PANTHER PTHR35810:SF1 1 320 2.2E-147 T 26-04-2016 smi_1608 f4eba0b46290aca3eb307f990a5b6806 327 Pfam PF13310 Virulence protein RhuM family 62 308 9.2E-105 T 26-04-2016 IPR011204 Virulence protein RhuM-like smi_0344 00af74991a99f28ab81f47bab5f2cda8 543 Gene3D G3DSA:1.20.58.220 334 441 2.0E-17 T 26-04-2016 smi_0344 00af74991a99f28ab81f47bab5f2cda8 543 Gene3D G3DSA:1.20.58.220 443 539 9.3E-19 T 26-04-2016 smi_0344 00af74991a99f28ab81f47bab5f2cda8 543 Pfam PF01895 PhoU domain 456 537 1.4E-12 T 26-04-2016 IPR026022 PhoU domain smi_0344 00af74991a99f28ab81f47bab5f2cda8 543 Pfam PF01895 PhoU domain 348 430 3.1E-10 T 26-04-2016 IPR026022 PhoU domain smi_0344 00af74991a99f28ab81f47bab5f2cda8 543 TIGRFAM TIGR00704 NaPi_cotrn_rel: Na/Pi-cotransporter II-related protein 8 315 1.0E-68 T 26-04-2016 IPR004633 Na/Pi-cotransporter II-related/YqeW-like protein GO:0016020 smi_0344 00af74991a99f28ab81f47bab5f2cda8 543 SUPERFAMILY SSF109755 333 539 1.36E-45 T 26-04-2016 smi_0344 00af74991a99f28ab81f47bab5f2cda8 543 PANTHER PTHR10010:SF26 1 455 1.9E-113 T 26-04-2016 smi_0344 00af74991a99f28ab81f47bab5f2cda8 543 Pfam PF02690 Na+/Pi-cotransporter 163 261 1.9E-16 T 26-04-2016 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: REACT_15518 smi_0344 00af74991a99f28ab81f47bab5f2cda8 543 Pfam PF02690 Na+/Pi-cotransporter 18 153 6.2E-47 T 26-04-2016 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: REACT_15518 smi_0344 00af74991a99f28ab81f47bab5f2cda8 543 PANTHER PTHR10010 1 455 1.9E-113 T 26-04-2016 smi_0038 3e94fb70c517ca1c519897c39c1bcac4 500 SUPERFAMILY SSF69360 342 500 4.87E-62 T 26-04-2016 smi_0038 3e94fb70c517ca1c519897c39c1bcac4 500 Pfam PF01473 Putative cell wall binding repeat 383 401 3.2E-7 T 26-04-2016 IPR018337 Cell wall/choline-binding repeat smi_0038 3e94fb70c517ca1c519897c39c1bcac4 500 Pfam PF01473 Putative cell wall binding repeat 423 441 1.3E-7 T 26-04-2016 IPR018337 Cell wall/choline-binding repeat smi_0038 3e94fb70c517ca1c519897c39c1bcac4 500 Pfam PF01473 Putative cell wall binding repeat 443 461 9.3E-7 T 26-04-2016 IPR018337 Cell wall/choline-binding repeat smi_0038 3e94fb70c517ca1c519897c39c1bcac4 500 Pfam PF01473 Putative cell wall binding repeat 363 381 3.9E-6 T 26-04-2016 IPR018337 Cell wall/choline-binding repeat smi_0038 3e94fb70c517ca1c519897c39c1bcac4 500 Pfam PF01473 Putative cell wall binding repeat 465 481 0.0014 T 26-04-2016 IPR018337 Cell wall/choline-binding repeat smi_0038 3e94fb70c517ca1c519897c39c1bcac4 500 Pfam PF01473 Putative cell wall binding repeat 403 421 7.5E-7 T 26-04-2016 IPR018337 Cell wall/choline-binding repeat smi_0038 3e94fb70c517ca1c519897c39c1bcac4 500 Pfam PF01473 Putative cell wall binding repeat 343 361 0.002 T 26-04-2016 IPR018337 Cell wall/choline-binding repeat smi_0038 3e94fb70c517ca1c519897c39c1bcac4 500 PANTHER PTHR33308 323 475 1.2E-15 T 26-04-2016 smi_0038 3e94fb70c517ca1c519897c39c1bcac4 500 PANTHER PTHR33308:SF3 323 475 1.2E-15 T 26-04-2016 smi_0038 3e94fb70c517ca1c519897c39c1bcac4 500 Gene3D G3DSA:2.20.120.10 374 414 2.6E-21 T 26-04-2016 smi_0038 3e94fb70c517ca1c519897c39c1bcac4 500 Gene3D G3DSA:2.20.120.10 415 453 9.8E-22 T 26-04-2016 smi_0038 3e94fb70c517ca1c519897c39c1bcac4 500 Gene3D G3DSA:2.20.120.10 340 373 9.0E-14 T 26-04-2016 smi_0038 3e94fb70c517ca1c519897c39c1bcac4 500 Gene3D G3DSA:2.20.120.10 454 489 6.0E-7 T 26-04-2016 smi_1347 bb2b888072d0429f77aaf9187cf346f3 301 Gene3D G3DSA:1.20.1080.10 3 176 2.9E-79 T 26-04-2016 IPR023271 Aquaporin-like smi_1347 bb2b888072d0429f77aaf9187cf346f3 301 Gene3D G3DSA:1.20.1080.10 222 300 2.9E-79 T 26-04-2016 IPR023271 Aquaporin-like smi_1347 bb2b888072d0429f77aaf9187cf346f3 301 SUPERFAMILY SSF81338 215 300 7.06E-58 T 26-04-2016 IPR023271 Aquaporin-like smi_1347 bb2b888072d0429f77aaf9187cf346f3 301 SUPERFAMILY SSF81338 6 169 7.06E-58 T 26-04-2016 IPR023271 Aquaporin-like smi_1347 bb2b888072d0429f77aaf9187cf346f3 301 ProSitePatterns PS00221 MIP family signature. 67 75 - T 26-04-2016 IPR022357 Major intrinsic protein, conserved site GO:0005215|GO:0006810|GO:0016020 smi_1347 bb2b888072d0429f77aaf9187cf346f3 301 Pfam PF00230 Major intrinsic protein 222 295 5.1E-10 T 26-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 smi_1347 bb2b888072d0429f77aaf9187cf346f3 301 Pfam PF00230 Major intrinsic protein 9 168 4.0E-25 T 26-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 smi_1347 bb2b888072d0429f77aaf9187cf346f3 301 PRINTS PR00783 Major intrinsic protein family signature 49 73 1.8E-34 T 26-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 smi_1347 bb2b888072d0429f77aaf9187cf346f3 301 PRINTS PR00783 Major intrinsic protein family signature 86 105 1.8E-34 T 26-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 smi_1347 bb2b888072d0429f77aaf9187cf346f3 301 PRINTS PR00783 Major intrinsic protein family signature 228 250 1.8E-34 T 26-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 smi_1347 bb2b888072d0429f77aaf9187cf346f3 301 PRINTS PR00783 Major intrinsic protein family signature 7 26 1.8E-34 T 26-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 smi_1347 bb2b888072d0429f77aaf9187cf346f3 301 PRINTS PR00783 Major intrinsic protein family signature 279 299 1.8E-34 T 26-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 smi_1347 bb2b888072d0429f77aaf9187cf346f3 301 PANTHER PTHR19139:SF147 1 168 1.3E-56 T 26-04-2016 smi_1347 bb2b888072d0429f77aaf9187cf346f3 301 PANTHER PTHR19139:SF147 218 299 1.3E-56 T 26-04-2016 smi_1347 bb2b888072d0429f77aaf9187cf346f3 301 PANTHER PTHR19139 1 168 1.3E-56 T 26-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 smi_1347 bb2b888072d0429f77aaf9187cf346f3 301 PANTHER PTHR19139 218 299 1.3E-56 T 26-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 smi_0533 841e0bbef21411c8b90c781721f60acd 213 Pfam PF07853 Protein of unknown function (DUF1648) 15 63 1.0E-17 T 26-04-2016 IPR012867 Domain of unknown function DUF1648 smi_0533 841e0bbef21411c8b90c781721f60acd 213 PIRSF PIRSF038959 2 213 1.8E-37 T 26-04-2016 IPR026272 Immunity protein SdpI smi_0533 841e0bbef21411c8b90c781721f60acd 213 PANTHER PTHR37810 1 213 3.8E-19 T 26-04-2016 smi_0533 841e0bbef21411c8b90c781721f60acd 213 PANTHER PTHR37810:SF1 1 213 3.8E-19 T 26-04-2016 smi_0533 841e0bbef21411c8b90c781721f60acd 213 Pfam PF13630 SdpI/YhfL protein family 137 205 7.7E-23 T 26-04-2016 IPR025962 SdpI/YhfL protein family smi_0784 f18128c93691262f2b65f44929d4d784 122 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 56 122 4.1E-30 T 26-04-2016 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 smi_0784 f18128c93691262f2b65f44929d4d784 122 Gene3D G3DSA:3.30.1390.10 53 122 9.0E-32 T 26-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like smi_0784 f18128c93691262f2b65f44929d4d784 122 SUPERFAMILY SSF48300 3 50 9.94E-14 T 26-04-2016 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_0784 f18128c93691262f2b65f44929d4d784 122 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 5 52 6.7E-19 T 26-04-2016 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_0784 f18128c93691262f2b65f44929d4d784 122 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 2 122 24.199 T 26-04-2016 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_0784 f18128c93691262f2b65f44929d4d784 122 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 57 122 3.0E-17 T 26-04-2016 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 smi_0784 f18128c93691262f2b65f44929d4d784 122 Gene3D G3DSA:1.20.5.710 2 52 7.1E-21 T 26-04-2016 smi_0784 f18128c93691262f2b65f44929d4d784 122 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 122 5.0E-45 T 26-04-2016 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_0784 f18128c93691262f2b65f44929d4d784 122 SUPERFAMILY SSF54736 53 122 1.05E-23 T 26-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like smi_0397 659c143fb5e798f3afdb4f0a01cfbf28 226 SUPERFAMILY SSF52540 1 217 3.51E-67 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0397 659c143fb5e798f3afdb4f0a01cfbf28 226 ProSitePatterns PS00211 ABC transporters family signature. 132 146 - T 26-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 smi_0397 659c143fb5e798f3afdb4f0a01cfbf28 226 Gene3D G3DSA:3.40.50.300 1 217 1.0E-69 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0397 659c143fb5e798f3afdb4f0a01cfbf28 226 PANTHER PTHR24220 3 212 9.2E-87 T 26-04-2016 smi_0397 659c143fb5e798f3afdb4f0a01cfbf28 226 Pfam PF00005 ABC transporter 17 159 4.1E-36 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 smi_0397 659c143fb5e798f3afdb4f0a01cfbf28 226 SMART SM00382 26 208 2.7E-11 T 26-04-2016 IPR003593 AAA+ ATPase domain smi_0695 faad5350b689eddd321265f05d9bd2e9 293 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 74 87 - T 26-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 smi_0695 faad5350b689eddd321265f05d9bd2e9 293 PANTHER PTHR30304 1 293 4.2E-90 T 26-04-2016 smi_0695 faad5350b689eddd321265f05d9bd2e9 293 PIRSF PIRSF001359 1 293 4.9E-116 T 26-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 smi_0695 faad5350b689eddd321265f05d9bd2e9 293 Pfam PF01116 Fructose-bisphosphate aldolase class-II 6 292 4.8E-96 T 26-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 smi_0695 faad5350b689eddd321265f05d9bd2e9 293 TIGRFAM TIGR01859 fruc_bis_ald_: fructose-1,6-bisphosphate aldolase, class II 3 293 3.5E-123 T 26-04-2016 IPR011289 Fructose-1,6-bisphosphate aldolase, class 2 GO:0004332|GO:0006096|GO:0008270|GO:0030388 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385|UniPathway: UPA00109 smi_0695 faad5350b689eddd321265f05d9bd2e9 293 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 1 293 4.8E-92 T 26-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 smi_0695 faad5350b689eddd321265f05d9bd2e9 293 Gene3D G3DSA:3.20.20.70 1 293 8.4E-104 T 26-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 smi_0695 faad5350b689eddd321265f05d9bd2e9 293 SUPERFAMILY SSF51569 1 293 5.68E-96 T 26-04-2016 smi_0695 faad5350b689eddd321265f05d9bd2e9 293 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 133 144 - T 26-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 smi_0209 2bfb6e2a964e6447fb85202c9ee0ff20 86 Pfam PF11773 Type II secretory pathway pseudopilin 2 83 1.9E-27 T 26-04-2016 IPR021749 Type II secretory pathway pseudopilin smi_0673 a6ba462079de606e600dc3bdaebb2252 112 Pfam PF03831 PhnA domain 47 112 2.2E-32 T 26-04-2016 IPR013988 PhnA protein, C-terminal smi_0673 a6ba462079de606e600dc3bdaebb2252 112 TIGRFAM TIGR00686 phnA: putative alkylphosphonate utilization operon protein PhnA 3 111 1.6E-50 T 26-04-2016 IPR004624 PhnA protein smi_0673 a6ba462079de606e600dc3bdaebb2252 112 Gene3D G3DSA:2.30.30.40 44 112 2.5E-36 T 26-04-2016 smi_0673 a6ba462079de606e600dc3bdaebb2252 112 PANTHER PTHR30305 2 112 2.7E-82 T 26-04-2016 smi_0673 a6ba462079de606e600dc3bdaebb2252 112 Pfam PF08274 PhnA Zinc-Ribbon 4 31 1.3E-16 T 26-04-2016 IPR013987 PhnA protein, N-terminal smi_0673 a6ba462079de606e600dc3bdaebb2252 112 SUPERFAMILY SSF82057 41 112 3.85E-27 T 26-04-2016 smi_0673 a6ba462079de606e600dc3bdaebb2252 112 SUPERFAMILY SSF57783 3 37 4.59E-15 T 26-04-2016 smi_0673 a6ba462079de606e600dc3bdaebb2252 112 Gene3D G3DSA:2.20.25.10 1 41 7.1E-24 T 26-04-2016 smi_1591 8f56ceee48d5a02f9de9584bff8d4b9d 219 Gene3D G3DSA:1.10.3720.10 16 215 9.5E-43 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 smi_1591 8f56ceee48d5a02f9de9584bff8d4b9d 219 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 35 214 3.1E-19 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 smi_1591 8f56ceee48d5a02f9de9584bff8d4b9d 219 SUPERFAMILY SSF161098 16 197 6.54E-38 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 smi_1591 8f56ceee48d5a02f9de9584bff8d4b9d 219 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 13 105 3.8E-20 T 26-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 smi_1591 8f56ceee48d5a02f9de9584bff8d4b9d 219 PANTHER PTHR30614 11 219 4.1E-64 T 26-04-2016 smi_0609 79a466e59a4d4792bcd4158bf06eca4c 298 Pfam PF00480 ROK family 4 287 1.4E-53 T 26-04-2016 IPR000600 ROK family smi_0609 79a466e59a4d4792bcd4158bf06eca4c 298 SUPERFAMILY SSF53067 1 291 3.98E-60 T 26-04-2016 smi_0609 79a466e59a4d4792bcd4158bf06eca4c 298 Gene3D G3DSA:3.30.420.40 137 275 1.1E-36 T 26-04-2016 smi_0609 79a466e59a4d4792bcd4158bf06eca4c 298 PANTHER PTHR18964:SF109 1 296 4.8E-76 T 26-04-2016 smi_0609 79a466e59a4d4792bcd4158bf06eca4c 298 Gene3D G3DSA:3.30.420.40 1 136 2.7E-45 T 26-04-2016 smi_0609 79a466e59a4d4792bcd4158bf06eca4c 298 PANTHER PTHR18964 1 296 4.8E-76 T 26-04-2016 smi_1153 5ad765ddd511fefc81c373f98e1095c1 305 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 21 304 2.0E-74 T 26-04-2016 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 smi_1153 5ad765ddd511fefc81c373f98e1095c1 305 Pfam PF06574 FAD synthetase 16 166 6.9E-41 T 26-04-2016 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 smi_1153 5ad765ddd511fefc81c373f98e1095c1 305 PANTHER PTHR22749 15 303 5.2E-143 T 26-04-2016 IPR023468 Riboflavin kinase KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|UniPathway: UPA00276 smi_1153 5ad765ddd511fefc81c373f98e1095c1 305 Gene3D G3DSA:3.40.50.620 16 179 2.2E-46 T 26-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold smi_1153 5ad765ddd511fefc81c373f98e1095c1 305 SUPERFAMILY SSF52374 20 174 6.95E-27 T 26-04-2016 smi_1153 5ad765ddd511fefc81c373f98e1095c1 305 PIRSF PIRSF004491 1 305 1.1E-88 T 26-04-2016 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 smi_1153 5ad765ddd511fefc81c373f98e1095c1 305 SMART SM00904 182 305 3.7E-49 T 26-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 smi_1153 5ad765ddd511fefc81c373f98e1095c1 305 Pfam PF01687 Riboflavin kinase 183 304 1.8E-32 T 26-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 smi_1153 5ad765ddd511fefc81c373f98e1095c1 305 PANTHER PTHR22749:SF3 15 303 5.2E-143 T 26-04-2016 smi_1153 5ad765ddd511fefc81c373f98e1095c1 305 Gene3D G3DSA:2.40.30.30 180 304 1.1E-39 T 26-04-2016 IPR023465 Riboflavin kinase domain GO:0008531|GO:0009231 smi_1153 5ad765ddd511fefc81c373f98e1095c1 305 SUPERFAMILY SSF82114 173 304 3.49E-42 T 26-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 smi_0974 0c1589865e8154bff8c49f7b43e3f568 49 SUPERFAMILY SSF57829 2 49 6.1E-16 T 26-04-2016 IPR011332 Zinc-binding ribosomal protein GO:0006412 smi_0974 0c1589865e8154bff8c49f7b43e3f568 49 Pfam PF00471 Ribosomal protein L33 3 49 1.7E-17 T 26-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_0974 0c1589865e8154bff8c49f7b43e3f568 49 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 3 49 2.5E-18 T 26-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_0974 0c1589865e8154bff8c49f7b43e3f568 49 PANTHER PTHR15238:SF3 1 49 1.4E-17 T 26-04-2016 smi_0974 0c1589865e8154bff8c49f7b43e3f568 49 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 1 49 16.329 T 26-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_0974 0c1589865e8154bff8c49f7b43e3f568 49 ProSitePatterns PS00582 Ribosomal protein L33 signature. 17 36 - T 26-04-2016 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_0974 0c1589865e8154bff8c49f7b43e3f568 49 PANTHER PTHR15238 1 49 1.4E-17 T 26-04-2016 smi_1402 37bac886bf5f016496c38ee4e835cb47 447 Pfam PF00271 Helicase conserved C-terminal domain 229 337 1.5E-24 T 26-04-2016 IPR001650 Helicase, C-terminal smi_1402 37bac886bf5f016496c38ee4e835cb47 447 SMART SM00487 20 220 4.6E-52 T 26-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain smi_1402 37bac886bf5f016496c38ee4e835cb47 447 Hamap MF_01494 DEAD-box ATP-dependent RNA helicase CshB [cshB]. 1 435 52.265 T 26-04-2016 IPR030881 DEAD-box ATP-dependent RNA helicase CshB GO:0004386|GO:0009409 smi_1402 37bac886bf5f016496c38ee4e835cb47 447 SUPERFAMILY SSF52540 69 357 4.75E-64 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1402 37bac886bf5f016496c38ee4e835cb47 447 Gene3D G3DSA:3.40.50.300 1 208 2.4E-69 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1402 37bac886bf5f016496c38ee4e835cb47 447 PANTHER PTHR24031 1 440 1.3E-230 T 26-04-2016 smi_1402 37bac886bf5f016496c38ee4e835cb47 447 PANTHER PTHR24031:SF280 1 440 1.3E-230 T 26-04-2016 smi_1402 37bac886bf5f016496c38ee4e835cb47 447 Gene3D G3DSA:3.40.50.300 209 363 3.1E-41 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1402 37bac886bf5f016496c38ee4e835cb47 447 SMART SM00490 256 337 3.9E-26 T 26-04-2016 IPR001650 Helicase, C-terminal smi_1402 37bac886bf5f016496c38ee4e835cb47 447 Pfam PF00270 DEAD/DEAH box helicase 25 191 3.9E-43 T 26-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 smi_1308 8d5da88455d922f641c99c1f63d7cb77 139 Gene3D G3DSA:1.20.5.440 93 137 3.5E-12 T 26-04-2016 smi_1308 8d5da88455d922f641c99c1f63d7cb77 139 Gene3D G3DSA:2.60.15.10 3 92 1.8E-26 T 26-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 smi_1308 8d5da88455d922f641c99c1f63d7cb77 139 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 4 85 1.2E-25 T 26-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 smi_1308 8d5da88455d922f641c99c1f63d7cb77 139 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 2 135 22.613 T 26-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 smi_1308 8d5da88455d922f641c99c1f63d7cb77 139 PANTHER PTHR13822 1 139 4.4E-34 T 26-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 smi_1308 8d5da88455d922f641c99c1f63d7cb77 139 SUPERFAMILY SSF51344 3 87 1.96E-22 T 26-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 smi_1308 8d5da88455d922f641c99c1f63d7cb77 139 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 4 135 7.1E-29 T 26-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 smi_1308 8d5da88455d922f641c99c1f63d7cb77 139 Pfam PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain 89 135 8.1E-14 T 26-04-2016 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain smi_1308 8d5da88455d922f641c99c1f63d7cb77 139 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 20 91 5.0E-18 T 26-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 smi_0985 6bf1411f2856cc8e5de8ad15e73661cd 898 Gene3D G3DSA:1.20.1440.90 272 391 9.7E-24 T 26-04-2016 smi_0985 6bf1411f2856cc8e5de8ad15e73661cd 898 Hamap MF_00595 Phosphoenolpyruvate carboxylase [ppc]. 8 898 17.176 T 26-04-2016 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 smi_0985 6bf1411f2856cc8e5de8ad15e73661cd 898 PANTHER PTHR30523 3 898 0.0 T 26-04-2016 smi_0985 6bf1411f2856cc8e5de8ad15e73661cd 898 SUPERFAMILY SSF51621 17 898 2.67E-291 T 26-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 smi_0985 6bf1411f2856cc8e5de8ad15e73661cd 898 PANTHER PTHR30523:SF0 3 898 0.0 T 26-04-2016 smi_0985 6bf1411f2856cc8e5de8ad15e73661cd 898 ProSitePatterns PS00781 Phosphoenolpyruvate carboxylase active site 1. 134 145 - T 26-04-2016 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 smi_0985 6bf1411f2856cc8e5de8ad15e73661cd 898 Pfam PF00311 Phosphoenolpyruvate carboxylase 129 898 9.6E-259 T 26-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 smi_0985 6bf1411f2856cc8e5de8ad15e73661cd 898 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 186 202 7.7E-53 T 26-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 smi_0985 6bf1411f2856cc8e5de8ad15e73661cd 898 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 133 146 7.7E-53 T 26-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 smi_0985 6bf1411f2856cc8e5de8ad15e73661cd 898 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 592 621 7.7E-53 T 26-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 smi_0985 6bf1411f2856cc8e5de8ad15e73661cd 898 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 388 408 7.7E-53 T 26-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 smi_0985 6bf1411f2856cc8e5de8ad15e73661cd 898 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 727 753 7.7E-53 T 26-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 smi_0985 6bf1411f2856cc8e5de8ad15e73661cd 898 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 243 258 7.7E-53 T 26-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 smi_0985 6bf1411f2856cc8e5de8ad15e73661cd 898 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 550 570 7.7E-53 T 26-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 smi_0985 6bf1411f2856cc8e5de8ad15e73661cd 898 ProSitePatterns PS00393 Phosphoenolpyruvate carboxylase active site 2. 552 564 - T 26-04-2016 IPR033129 Phosphoenolpyruvate carboxylase, His active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 smi_1889 409cd3e3e844239790b016258d1a4ffd 118 PANTHER PTHR12899 6 118 1.0E-44 T 26-04-2016 smi_1889 409cd3e3e844239790b016258d1a4ffd 118 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 6 118 3.5E-49 T 26-04-2016 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_1889 409cd3e3e844239790b016258d1a4ffd 118 SUPERFAMILY SSF53137 7 116 4.3E-54 T 26-04-2016 smi_1889 409cd3e3e844239790b016258d1a4ffd 118 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 6 118 29.61 T 26-04-2016 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_1889 409cd3e3e844239790b016258d1a4ffd 118 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 7 118 1.3E-45 T 26-04-2016 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_1889 409cd3e3e844239790b016258d1a4ffd 118 Gene3D G3DSA:3.30.420.100 24 118 3.4E-40 T 26-04-2016 smi_1074 ebe8f1c53658d2d593f787f0b9de30b0 231 PANTHER PTHR31851 15 231 1.1E-55 T 26-04-2016 smi_1074 ebe8f1c53658d2d593f787f0b9de30b0 231 Pfam PF01988 VIT family 19 226 2.9E-48 T 26-04-2016 IPR008217 Ccc1 family smi_0225 0748e31efaab054a3e8f7411702a005f 557 Pfam PF00874 PRD domain 209 297 2.4E-6 T 26-04-2016 IPR011608 PRD domain GO:0006355 smi_0225 0748e31efaab054a3e8f7411702a005f 557 Pfam PF00874 PRD domain 319 408 1.7E-19 T 26-04-2016 IPR011608 PRD domain GO:0006355 smi_0225 0748e31efaab054a3e8f7411702a005f 557 Gene3D G3DSA:1.10.10.10 81 153 1.1E-5 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain smi_0225 0748e31efaab054a3e8f7411702a005f 557 PANTHER PTHR36203 3 551 8.2E-248 T 26-04-2016 smi_0225 0748e31efaab054a3e8f7411702a005f 557 SUPERFAMILY SSF46785 86 132 6.98E-5 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain smi_0225 0748e31efaab054a3e8f7411702a005f 557 Gene3D G3DSA:1.10.1790.10 317 409 4.4E-18 T 26-04-2016 IPR011608 PRD domain GO:0006355 smi_0225 0748e31efaab054a3e8f7411702a005f 557 Pfam PF08279 HTH domain 103 151 9.1E-5 T 26-04-2016 IPR013196 Helix-turn-helix, type 11 smi_0225 0748e31efaab054a3e8f7411702a005f 557 PANTHER PTHR36203:SF1 3 551 8.2E-248 T 26-04-2016 smi_0225 0748e31efaab054a3e8f7411702a005f 557 SUPERFAMILY SSF63520 315 409 1.31E-20 T 26-04-2016 IPR011608 PRD domain GO:0006355 smi_0225 0748e31efaab054a3e8f7411702a005f 557 SUPERFAMILY SSF52794 419 500 1.99E-5 T 26-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 smi_0225 0748e31efaab054a3e8f7411702a005f 557 Gene3D G3DSA:3.40.50.270 420 504 3.7E-7 T 26-04-2016 smi_1771 27a51934628db2a682aafd21ec169ace 180 Pfam PF11683 Protein of unknown function (DUF3278) 1 125 2.2E-32 T 26-04-2016 IPR021697 Protein of unknown function DUF3278 smi_0738 9a80826481e1a491ffdf3d4b2791deb3 271 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 42 262 4.6E-58 T 26-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF smi_0738 9a80826481e1a491ffdf3d4b2791deb3 271 PANTHER PTHR30614 32 266 5.8E-53 T 26-04-2016 smi_0738 9a80826481e1a491ffdf3d4b2791deb3 271 Gene3D G3DSA:3.40.190.10 226 262 2.6E-40 T 26-04-2016 smi_0738 9a80826481e1a491ffdf3d4b2791deb3 271 Gene3D G3DSA:3.40.190.10 37 121 2.6E-40 T 26-04-2016 smi_0738 9a80826481e1a491ffdf3d4b2791deb3 271 SMART SM00062 41 263 2.4E-57 T 26-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF smi_0738 9a80826481e1a491ffdf3d4b2791deb3 271 Gene3D G3DSA:3.40.190.10 122 218 1.1E-20 T 26-04-2016 smi_0738 9a80826481e1a491ffdf3d4b2791deb3 271 SMART SM00079 41 262 6.3E-4 T 26-04-2016 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 smi_0738 9a80826481e1a491ffdf3d4b2791deb3 271 SUPERFAMILY SSF53850 4 262 2.21E-68 T 26-04-2016 smi_0738 9a80826481e1a491ffdf3d4b2791deb3 271 PANTHER PTHR30614:SF15 32 266 5.8E-53 T 26-04-2016 smi_1770 321d990da3714e0b3a4e506c17f13f67 64 PANTHER PTHR10245 8 63 6.0E-19 T 26-04-2016 smi_1770 321d990da3714e0b3a4e506c17f13f67 64 Gene3D G3DSA:1.10.260.40 2 63 9.9E-25 T 26-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 smi_1770 321d990da3714e0b3a4e506c17f13f67 64 SUPERFAMILY SSF47413 2 62 2.68E-18 T 26-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 smi_1770 321d990da3714e0b3a4e506c17f13f67 64 SMART SM00530 3 58 1.0E-16 T 26-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 smi_1770 321d990da3714e0b3a4e506c17f13f67 64 PANTHER PTHR10245:SF56 8 63 6.0E-19 T 26-04-2016 smi_1770 321d990da3714e0b3a4e506c17f13f67 64 Pfam PF01381 Helix-turn-helix 4 56 1.4E-17 T 26-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 smi_1046 36adf575027108440dc67e1a7c8f74e1 577 SUPERFAMILY SSF52009 127 244 1.44E-35 T 26-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 smi_1046 36adf575027108440dc67e1a7c8f74e1 577 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 252 545 5.3E-128 T 26-04-2016 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 smi_1046 36adf575027108440dc67e1a7c8f74e1 577 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 295 314 1.3E-31 T 26-04-2016 smi_1046 36adf575027108440dc67e1a7c8f74e1 577 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 468 483 1.3E-31 T 26-04-2016 smi_1046 36adf575027108440dc67e1a7c8f74e1 577 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 451 466 1.3E-31 T 26-04-2016 smi_1046 36adf575027108440dc67e1a7c8f74e1 577 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 504 516 1.3E-31 T 26-04-2016 smi_1046 36adf575027108440dc67e1a7c8f74e1 577 SUPERFAMILY SSF51621 251 553 4.45E-108 T 26-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 smi_1046 36adf575027108440dc67e1a7c8f74e1 577 PIRSF PIRSF000732 1 577 2.7E-209 T 26-04-2016 IPR024692 Phosphotransferase system, enzyme I GO:0008965|GO:0009401 smi_1046 36adf575027108440dc67e1a7c8f74e1 577 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 5 569 4.2E-224 T 26-04-2016 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 smi_1046 36adf575027108440dc67e1a7c8f74e1 577 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 451 469 - T 26-04-2016 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 smi_1046 36adf575027108440dc67e1a7c8f74e1 577 PANTHER PTHR22931 13 29 9.1E-202 T 26-04-2016 smi_1046 36adf575027108440dc67e1a7c8f74e1 577 PANTHER PTHR22931 50 554 9.1E-202 T 26-04-2016 smi_1046 36adf575027108440dc67e1a7c8f74e1 577 Gene3D G3DSA:3.20.20.60 259 574 1.1E-111 T 26-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 smi_1046 36adf575027108440dc67e1a7c8f74e1 577 Pfam PF00391 PEP-utilising enzyme, mobile domain 154 227 4.1E-22 T 26-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 smi_1046 36adf575027108440dc67e1a7c8f74e1 577 Gene3D G3DSA:3.50.30.10 135 258 4.5E-43 T 26-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 smi_1046 36adf575027108440dc67e1a7c8f74e1 577 SUPERFAMILY SSF47831 24 145 4.58E-35 T 26-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 smi_1046 36adf575027108440dc67e1a7c8f74e1 577 Pfam PF05524 PEP-utilising enzyme, N-terminal 6 128 5.9E-32 T 26-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 smi_1046 36adf575027108440dc67e1a7c8f74e1 577 Gene3D G3DSA:1.10.274.10 24 134 1.4E-40 T 26-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 smi_1046 36adf575027108440dc67e1a7c8f74e1 577 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 186 197 - T 26-04-2016 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 smi_0106 c38662bb0ecdcbae551b52f6ec899ca9 60 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 54 3.2E-19 T 26-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 smi_0106 c38662bb0ecdcbae551b52f6ec899ca9 60 SUPERFAMILY SSF57829 2 54 1.71E-16 T 26-04-2016 IPR011332 Zinc-binding ribosomal protein GO:0006412 smi_0106 c38662bb0ecdcbae551b52f6ec899ca9 60 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 54 17.762 T 26-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 smi_0106 c38662bb0ecdcbae551b52f6ec899ca9 60 PANTHER PTHR35534 1 60 1.0E-28 T 26-04-2016 smi_0106 c38662bb0ecdcbae551b52f6ec899ca9 60 Pfam PF01783 Ribosomal L32p protein family 2 54 2.4E-19 T 26-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 smi_0030 f963843bf33c3626c5eff8868ede7218 165 SMART SM00947 24 164 8.8E-31 T 26-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 smi_0030 f963843bf33c3626c5eff8868ede7218 165 SUPERFAMILY SSF53056 4 164 7.33E-41 T 26-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 smi_0030 f963843bf33c3626c5eff8868ede7218 165 Pfam PF00484 Carbonic anhydrase 32 159 2.8E-13 T 26-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 smi_0030 f963843bf33c3626c5eff8868ede7218 165 Gene3D G3DSA:3.40.1050.10 3 164 2.9E-39 T 26-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 smi_0030 f963843bf33c3626c5eff8868ede7218 165 PANTHER PTHR11002:SF9 1 165 3.0E-63 T 26-04-2016 smi_0030 f963843bf33c3626c5eff8868ede7218 165 PANTHER PTHR11002 1 165 3.0E-63 T 26-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 smi_0847 7517a3e75f9e724989c3afac114a7d80 242 Gene3D G3DSA:3.40.630.30 121 235 5.9E-7 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase smi_0847 7517a3e75f9e724989c3afac114a7d80 242 Pfam PF12746 GNAT acetyltransferase 2 235 1.1E-69 T 26-04-2016 IPR027365 GNAT acetyltransferase YdfB-like KEGG: 00061+2.3.1.-|KEGG: 00253+2.3.1.-|KEGG: 00261+2.3.1.-|KEGG: 00310+2.3.1.-|KEGG: 00330+2.3.1.-|KEGG: 00332+2.3.1.-|KEGG: 00340+2.3.1.-|KEGG: 00350+2.3.1.-|KEGG: 00564+2.3.1.-|KEGG: 00565+2.3.1.-|KEGG: 00604+2.3.1.-|KEGG: 00623+2.3.1.-|KEGG: 00626+2.3.1.-|KEGG: 00627+2.3.1.-|KEGG: 00642+2.3.1.-|KEGG: 00650+2.3.1.-|KEGG: 00680+2.3.1.-|KEGG: 00903+2.3.1.-|KEGG: 00904+2.3.1.-|KEGG: 00906+2.3.1.-|KEGG: 00940+2.3.1.-|KEGG: 00942+2.3.1.-|KEGG: 00950+2.3.1.-|KEGG: 00960+2.3.1.-|KEGG: 00965+2.3.1.- smi_0847 7517a3e75f9e724989c3afac114a7d80 242 PANTHER PTHR31143 56 239 2.2E-16 T 26-04-2016 smi_0847 7517a3e75f9e724989c3afac114a7d80 242 PANTHER PTHR31143:SF4 56 239 2.2E-16 T 26-04-2016 smi_0847 7517a3e75f9e724989c3afac114a7d80 242 SUPERFAMILY SSF55729 99 234 1.6E-10 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase smi_0721 98b5e62e0576e6a7881149bcca85b740 245 Gene3D G3DSA:3.10.129.10 150 240 6.1E-25 T 26-04-2016 IPR029069 HotDog domain smi_0721 98b5e62e0576e6a7881149bcca85b740 245 PANTHER PTHR31727 53 218 2.7E-53 T 26-04-2016 smi_0721 98b5e62e0576e6a7881149bcca85b740 245 SUPERFAMILY SSF54637 153 239 1.76E-22 T 26-04-2016 IPR029069 HotDog domain smi_0721 98b5e62e0576e6a7881149bcca85b740 245 SUPERFAMILY SSF54637 1 146 1.61E-34 T 26-04-2016 IPR029069 HotDog domain smi_0721 98b5e62e0576e6a7881149bcca85b740 245 Pfam PF01643 Acyl-ACP thioesterase 2 241 2.2E-89 T 26-04-2016 IPR002864 Acyl-ACP thioesterase GO:0006633|GO:0016790 smi_0721 98b5e62e0576e6a7881149bcca85b740 245 Gene3D G3DSA:3.10.129.10 2 145 4.1E-34 T 26-04-2016 IPR029069 HotDog domain smi_2069 836d8f130a0c5769c5c760f334f531ae 181 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 51 73 - T 26-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 smi_2069 836d8f130a0c5769c5c760f334f531ae 181 Pfam PF01066 CDP-alcohol phosphatidyltransferase 6 73 4.2E-18 T 26-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 smi_2069 836d8f130a0c5769c5c760f334f531ae 181 PIRSF PIRSF000847 1 181 3.1E-50 T 26-04-2016 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 smi_2069 836d8f130a0c5769c5c760f334f531ae 181 PANTHER PTHR14269 6 174 6.3E-48 T 26-04-2016 smi_2069 836d8f130a0c5769c5c760f334f531ae 181 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 5 168 3.0E-53 T 26-04-2016 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 smi_0839 188b745a46b82daf110b2946a477dbab 401 Gene3D G3DSA:2.40.50.100 190 213 4.3E-4 T 26-04-2016 smi_0839 188b745a46b82daf110b2946a477dbab 401 Gene3D G3DSA:2.40.50.100 79 102 4.3E-4 T 26-04-2016 smi_0839 188b745a46b82daf110b2946a477dbab 401 PANTHER PTHR32347:SF14 2 398 3.1E-98 T 26-04-2016 smi_0839 188b745a46b82daf110b2946a477dbab 401 PANTHER PTHR32347 2 398 3.1E-98 T 26-04-2016 smi_0839 188b745a46b82daf110b2946a477dbab 401 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 56 275 8.5E-13 T 26-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain smi_1935 1b40b64b0e860c22bb63dcc2295a5a00 154 SUPERFAMILY SSF52218 1 149 6.67E-22 T 26-04-2016 IPR029039 Flavoprotein-like domain smi_1935 1b40b64b0e860c22bb63dcc2295a5a00 154 PANTHER PTHR37297:SF1 3 154 2.1E-47 T 26-04-2016 smi_1935 1b40b64b0e860c22bb63dcc2295a5a00 154 Pfam PF07972 NrdI Flavodoxin like 6 143 5.1E-40 T 26-04-2016 IPR004465 Ribonucleotide reductase Class Ib, NrdI smi_1935 1b40b64b0e860c22bb63dcc2295a5a00 154 Gene3D G3DSA:3.40.50.360 5 151 1.2E-43 T 26-04-2016 IPR029039 Flavoprotein-like domain smi_1935 1b40b64b0e860c22bb63dcc2295a5a00 154 PIRSF PIRSF005087 2 154 1.9E-40 T 26-04-2016 IPR004465 Ribonucleotide reductase Class Ib, NrdI smi_1935 1b40b64b0e860c22bb63dcc2295a5a00 154 PANTHER PTHR37297 3 154 2.1E-47 T 26-04-2016 smi_1944 8da90e75ed59c77eb6f9ea7486928967 284 Pfam PF03180 NLPA lipoprotein 36 284 1.6E-92 T 26-04-2016 IPR004872 Lipoprotein NlpA family smi_1944 8da90e75ed59c77eb6f9ea7486928967 284 SUPERFAMILY SSF53850 35 284 1.73E-72 T 26-04-2016 smi_1944 8da90e75ed59c77eb6f9ea7486928967 284 PANTHER PTHR30429 3 284 2.2E-91 T 26-04-2016 IPR004872 Lipoprotein NlpA family smi_1944 8da90e75ed59c77eb6f9ea7486928967 284 Gene3D G3DSA:3.40.190.10 34 168 8.8E-48 T 26-04-2016 smi_1944 8da90e75ed59c77eb6f9ea7486928967 284 PIRSF PIRSF002854 1 284 6.0E-83 T 26-04-2016 IPR004872 Lipoprotein NlpA family smi_1970 42176174f7450f45bb5d3e07ac63c12d 213 TIGRFAM TIGR03608 L_ocin_972_ABC: putative bacteriocin export ABC transporter, lactococcin 972 group 4 209 1.1E-88 T 26-04-2016 IPR019895 Putative bacteriocin export ABC transporter, lactococcin 972 group smi_1970 42176174f7450f45bb5d3e07ac63c12d 213 SMART SM00382 26 211 4.3E-10 T 26-04-2016 IPR003593 AAA+ ATPase domain smi_1970 42176174f7450f45bb5d3e07ac63c12d 213 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 26-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 smi_1970 42176174f7450f45bb5d3e07ac63c12d 213 SUPERFAMILY SSF52540 5 213 9.35E-60 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1970 42176174f7450f45bb5d3e07ac63c12d 213 Pfam PF00005 ABC transporter 17 165 2.6E-30 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 smi_1970 42176174f7450f45bb5d3e07ac63c12d 213 Gene3D G3DSA:3.40.50.300 1 213 6.0E-64 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1970 42176174f7450f45bb5d3e07ac63c12d 213 PANTHER PTHR24220 3 213 1.2E-76 T 26-04-2016 smi_1573 4446be5d4846b83ce92b7f1e9871d1c9 345 SUPERFAMILY SSF53187 178 341 2.14E-52 T 26-04-2016 smi_1573 4446be5d4846b83ce92b7f1e9871d1c9 345 SUPERFAMILY SSF53187 3 82 2.14E-52 T 26-04-2016 smi_1573 4446be5d4846b83ce92b7f1e9871d1c9 345 PANTHER PTHR32481:SF7 1 344 1.0E-200 T 26-04-2016 smi_1573 4446be5d4846b83ce92b7f1e9871d1c9 345 Gene3D G3DSA:2.40.30.40 70 166 2.6E-35 T 26-04-2016 IPR023367 Peptidase M42, domain 2 smi_1573 4446be5d4846b83ce92b7f1e9871d1c9 345 SUPERFAMILY SSF101821 70 183 9.16E-29 T 26-04-2016 smi_1573 4446be5d4846b83ce92b7f1e9871d1c9 345 PIRSF PIRSF001123 1 342 5.4E-41 T 26-04-2016 IPR008007 Peptidase M42 smi_1573 4446be5d4846b83ce92b7f1e9871d1c9 345 Pfam PF05343 M42 glutamyl aminopeptidase 45 334 9.2E-87 T 26-04-2016 IPR008007 Peptidase M42 smi_1573 4446be5d4846b83ce92b7f1e9871d1c9 345 Gene3D G3DSA:3.40.630.10 2 69 1.7E-63 T 26-04-2016 smi_1573 4446be5d4846b83ce92b7f1e9871d1c9 345 Gene3D G3DSA:3.40.630.10 167 341 1.7E-63 T 26-04-2016 smi_1573 4446be5d4846b83ce92b7f1e9871d1c9 345 PANTHER PTHR32481 1 344 1.0E-200 T 26-04-2016 smi_0828 dbb1861f20870388e5ab317d177d2590 262 Gene3D G3DSA:3.40.50.1820 19 259 5.1E-15 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold smi_0828 dbb1861f20870388e5ab317d177d2590 262 SUPERFAMILY SSF53474 18 128 5.42E-15 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold smi_0828 dbb1861f20870388e5ab317d177d2590 262 SUPERFAMILY SSF53474 227 258 5.42E-15 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold smi_0043 dc66a35667c21726de3d13639e7a3ca5 363 Gene3D G3DSA:3.40.50.300 215 325 3.6E-14 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0043 dc66a35667c21726de3d13639e7a3ca5 363 Gene3D G3DSA:3.40.50.300 1 174 3.6E-14 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0043 dc66a35667c21726de3d13639e7a3ca5 363 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 49 326 9.3E-17 T 26-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 smi_0043 dc66a35667c21726de3d13639e7a3ca5 363 SUPERFAMILY SSF52540 44 126 1.84E-9 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0043 dc66a35667c21726de3d13639e7a3ca5 363 SUPERFAMILY SSF52540 228 328 1.84E-9 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_2062 b09fbfbb42116e9e34919e47d22b50e2 259 Gene3D G3DSA:1.10.287.610 100 152 2.3E-26 T 26-04-2016 smi_2062 b09fbfbb42116e9e34919e47d22b50e2 259 PRINTS PR00395 Ribosomal protein S2 signature 87 104 1.3E-41 T 26-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_2062 b09fbfbb42116e9e34919e47d22b50e2 259 PRINTS PR00395 Ribosomal protein S2 signature 196 210 1.3E-41 T 26-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_2062 b09fbfbb42116e9e34919e47d22b50e2 259 PRINTS PR00395 Ribosomal protein S2 signature 158 175 1.3E-41 T 26-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_2062 b09fbfbb42116e9e34919e47d22b50e2 259 PRINTS PR00395 Ribosomal protein S2 signature 37 46 1.3E-41 T 26-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_2062 b09fbfbb42116e9e34919e47d22b50e2 259 PRINTS PR00395 Ribosomal protein S2 signature 6 24 1.3E-41 T 26-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_2062 b09fbfbb42116e9e34919e47d22b50e2 259 PRINTS PR00395 Ribosomal protein S2 signature 175 186 1.3E-41 T 26-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_2062 b09fbfbb42116e9e34919e47d22b50e2 259 Pfam PF00318 Ribosomal protein S2 9 224 1.6E-96 T 26-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_2062 b09fbfbb42116e9e34919e47d22b50e2 259 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 6 17 - T 26-04-2016 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 smi_2062 b09fbfbb42116e9e34919e47d22b50e2 259 Gene3D G3DSA:3.40.50.10490 158 244 5.3E-69 T 26-04-2016 smi_2062 b09fbfbb42116e9e34919e47d22b50e2 259 Gene3D G3DSA:3.40.50.10490 23 99 5.3E-69 T 26-04-2016 smi_2062 b09fbfbb42116e9e34919e47d22b50e2 259 SUPERFAMILY SSF52313 6 230 7.19E-96 T 26-04-2016 IPR023591 Ribosomal protein S2, flavodoxin-like domain smi_2062 b09fbfbb42116e9e34919e47d22b50e2 259 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 3 226 9.0E-105 T 26-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 smi_2062 b09fbfbb42116e9e34919e47d22b50e2 259 PANTHER PTHR12534 1 251 2.3E-121 T 26-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 smi_2062 b09fbfbb42116e9e34919e47d22b50e2 259 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 2 225 43.085 T 26-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 smi_0723 0a1fc659e70a8b046fc5fad61a3c1285 205 Pfam PF07314 Protein of unknown function (DUF1461) 6 180 2.4E-45 T 26-04-2016 IPR010178 Integral membrane protein 1906 smi_0723 0a1fc659e70a8b046fc5fad61a3c1285 205 TIGRFAM TIGR01906 integ_TIGR01906: integral membrane protein TIGR01906 1 202 9.7E-68 T 26-04-2016 IPR010178 Integral membrane protein 1906 smi_0324 105b45c5aa34500ee6d9f8f6889f9d53 308 PANTHER PTHR30465:SF75 21 308 5.4E-167 T 26-04-2016 smi_0324 105b45c5aa34500ee6d9f8f6889f9d53 308 Gene3D G3DSA:1.10.3720.10 101 302 7.0E-19 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 smi_0324 105b45c5aa34500ee6d9f8f6889f9d53 308 PANTHER PTHR30465 21 308 5.4E-167 T 26-04-2016 smi_0324 105b45c5aa34500ee6d9f8f6889f9d53 308 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 124 306 5.4E-24 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 smi_0324 105b45c5aa34500ee6d9f8f6889f9d53 308 SUPERFAMILY SSF161098 102 287 2.35E-22 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 smi_0324 105b45c5aa34500ee6d9f8f6889f9d53 308 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 28 75 1.5E-9 T 26-04-2016 IPR025966 Oligopeptide transport permease C-like, N-terminal domain smi_1922 6921c99c2da8c2bd2da433da8edd9a78 132 Pfam PF03960 ArsC family 29 113 2.8E-18 T 26-04-2016 IPR006660 Arsenate reductase-like smi_1922 6921c99c2da8c2bd2da433da8edd9a78 132 SUPERFAMILY SSF52833 1 125 7.05E-33 T 26-04-2016 IPR012336 Thioredoxin-like fold smi_1922 6921c99c2da8c2bd2da433da8edd9a78 132 PANTHER PTHR30041 1 130 6.4E-71 T 26-04-2016 smi_1922 6921c99c2da8c2bd2da433da8edd9a78 132 PANTHER PTHR30041:SF5 1 130 6.4E-71 T 26-04-2016 smi_1922 6921c99c2da8c2bd2da433da8edd9a78 132 Gene3D G3DSA:3.40.30.10 1 125 7.4E-30 T 26-04-2016 IPR012336 Thioredoxin-like fold smi_1922 6921c99c2da8c2bd2da433da8edd9a78 132 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 2 114 3.6E-34 T 26-04-2016 IPR006504 Transcriptional regulator Spx/MgsR smi_0941 f2f2371210d28fdeb4fd9418d1e9c5e6 289 PANTHER PTHR21091 10 238 4.0E-88 T 26-04-2016 smi_0941 f2f2371210d28fdeb4fd9418d1e9c5e6 289 PIRSF PIRSF005917 4 288 1.3E-98 T 26-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 smi_0941 f2f2371210d28fdeb4fd9418d1e9c5e6 289 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 16 283 6.2E-82 T 26-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 smi_0941 f2f2371210d28fdeb4fd9418d1e9c5e6 289 SUPERFAMILY SSF53790 13 231 8.51E-80 T 26-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 smi_0941 f2f2371210d28fdeb4fd9418d1e9c5e6 289 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 93 104 - T 26-04-2016 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 smi_0941 f2f2371210d28fdeb4fd9418d1e9c5e6 289 Gene3D G3DSA:3.40.1010.10 14 123 8.1E-15 T 26-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 smi_0941 f2f2371210d28fdeb4fd9418d1e9c5e6 289 Gene3D G3DSA:3.30.950.10 124 235 1.4E-39 T 26-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 smi_0941 f2f2371210d28fdeb4fd9418d1e9c5e6 289 PANTHER PTHR21091:SF18 10 238 4.0E-88 T 26-04-2016 smi_0941 f2f2371210d28fdeb4fd9418d1e9c5e6 289 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 15 233 36.383 T 26-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 smi_0941 f2f2371210d28fdeb4fd9418d1e9c5e6 289 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 15 214 1.0E-22 T 26-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 smi_1427 9b5517ed9a8f07a009944496c1712358 314 Gene3D G3DSA:2.60.120.10 226 314 1.6E-33 T 26-04-2016 IPR014710 RmlC-like jelly roll fold smi_1427 9b5517ed9a8f07a009944496c1712358 314 Gene3D G3DSA:2.60.120.10 1 216 7.6E-81 T 26-04-2016 IPR014710 RmlC-like jelly roll fold smi_1427 9b5517ed9a8f07a009944496c1712358 314 PANTHER PTHR18964:SF114 1 255 4.7E-114 T 26-04-2016 smi_1427 9b5517ed9a8f07a009944496c1712358 314 SUPERFAMILY SSF51182 1 305 3.72E-105 T 26-04-2016 IPR011051 RmlC-like cupin domain smi_1427 9b5517ed9a8f07a009944496c1712358 314 TIGRFAM TIGR00218 manA: mannose-6-phosphate isomerase, class I 104 311 1.1E-44 T 26-04-2016 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882 smi_1427 9b5517ed9a8f07a009944496c1712358 314 PANTHER PTHR18964 1 255 4.7E-114 T 26-04-2016 smi_1427 9b5517ed9a8f07a009944496c1712358 314 PIRSF PIRSF036894 2 314 8.7E-130 T 26-04-2016 IPR014628 Mannose-6-phosphate isomerase, Firmicutes type, short form GO:0004476|GO:0005975 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882 smi_1427 9b5517ed9a8f07a009944496c1712358 314 Pfam PF01238 Phosphomannose isomerase type I 5 313 9.0E-55 T 26-04-2016 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882 smi_0638 ff3f2dd70317a31524defb51e2509255 371 SUPERFAMILY SSF69572 97 366 4.58E-58 T 26-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 smi_0638 ff3f2dd70317a31524defb51e2509255 371 Pfam PF00899 ThiF family 125 355 1.5E-41 T 26-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 smi_0638 ff3f2dd70317a31524defb51e2509255 371 Gene3D G3DSA:3.40.50.720 98 365 3.7E-49 T 26-04-2016 IPR016040 NAD(P)-binding domain smi_0638 ff3f2dd70317a31524defb51e2509255 371 PANTHER PTHR10953 101 285 1.5E-29 T 26-04-2016 smi_1502 d12d4922f4510a74981e12bda1396119 444 Gene3D G3DSA:3.90.190.20 300 434 5.9E-43 T 26-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 smi_1502 d12d4922f4510a74981e12bda1396119 444 Pfam PF08245 Mur ligase middle domain 108 277 6.9E-23 T 26-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 smi_1502 d12d4922f4510a74981e12bda1396119 444 Gene3D G3DSA:3.40.1190.10 92 299 2.0E-57 T 26-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 smi_1502 d12d4922f4510a74981e12bda1396119 444 Pfam PF02875 Mur ligase family, glutamate ligase domain 298 379 1.1E-15 T 26-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 smi_1502 d12d4922f4510a74981e12bda1396119 444 SUPERFAMILY SSF53244 297 431 1.83E-36 T 26-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 smi_1502 d12d4922f4510a74981e12bda1396119 444 Pfam PF01225 Mur ligase family, catalytic domain 4 103 3.1E-26 T 26-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 smi_1502 d12d4922f4510a74981e12bda1396119 444 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 2 438 34.634 T 26-04-2016 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 smi_1502 d12d4922f4510a74981e12bda1396119 444 SUPERFAMILY SSF51984 3 89 4.51E-19 T 26-04-2016 smi_1502 d12d4922f4510a74981e12bda1396119 444 PANTHER PTHR23135 1 426 5.7E-152 T 26-04-2016 smi_1502 d12d4922f4510a74981e12bda1396119 444 SUPERFAMILY SSF53623 90 295 1.7E-54 T 26-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 smi_1502 d12d4922f4510a74981e12bda1396119 444 Gene3D G3DSA:3.40.50.720 3 90 5.7E-26 T 26-04-2016 IPR016040 NAD(P)-binding domain smi_1502 d12d4922f4510a74981e12bda1396119 444 PANTHER PTHR23135:SF5 1 426 5.7E-152 T 26-04-2016 smi_1502 d12d4922f4510a74981e12bda1396119 444 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 5 427 2.1E-122 T 26-04-2016 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 smi_0116 af6c8c936ef6a406af3c501353c02ce1 283 PANTHER PTHR37038:SF1 2 283 1.6E-118 T 26-04-2016 smi_0116 af6c8c936ef6a406af3c501353c02ce1 283 SUPERFAMILY SSF47413 3 63 3.07E-8 T 26-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 smi_0116 af6c8c936ef6a406af3c501353c02ce1 283 PANTHER PTHR37038 2 283 1.6E-118 T 26-04-2016 smi_0116 af6c8c936ef6a406af3c501353c02ce1 283 Pfam PF12844 Helix-turn-helix domain 5 62 1.5E-7 T 26-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 smi_0116 af6c8c936ef6a406af3c501353c02ce1 283 Gene3D G3DSA:1.10.260.40 1 47 9.9E-5 T 26-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 smi_0116 af6c8c936ef6a406af3c501353c02ce1 283 TIGRFAM TIGR01716 RGG_Cterm: transcriptional activator, Rgg/GadR/MutR family, C-terminal domain 64 279 8.0E-40 T 26-04-2016 IPR010057 Transcription activator MutR, C-terminal smi_1552 a2cec303b6a35b6605e775ed3e5d384e 285 PIRSF PIRSF004793 15 275 1.3E-83 T 26-04-2016 IPR014046 Diadenylate cyclase-like smi_1552 a2cec303b6a35b6605e775ed3e5d384e 285 TIGRFAM TIGR00159 TIGR00159: TIGR00159 family protein 25 259 3.2E-81 T 26-04-2016 IPR014046 Diadenylate cyclase-like smi_1552 a2cec303b6a35b6605e775ed3e5d384e 285 PANTHER PTHR34185:SF1 11 285 3.0E-111 T 26-04-2016 smi_1552 a2cec303b6a35b6605e775ed3e5d384e 285 PANTHER PTHR34185 11 285 3.0E-111 T 26-04-2016 smi_1552 a2cec303b6a35b6605e775ed3e5d384e 285 SUPERFAMILY SSF143597 51 248 9.29E-65 T 26-04-2016 smi_1552 a2cec303b6a35b6605e775ed3e5d384e 285 Gene3D G3DSA:3.40.1700.10 120 249 1.9E-51 T 26-04-2016 smi_1552 a2cec303b6a35b6605e775ed3e5d384e 285 Pfam PF02457 DisA bacterial checkpoint controller nucleotide-binding 127 243 1.2E-40 T 26-04-2016 IPR003390 DNA integrity scanning protein, DisA, N-terminal smi_1070 b11a8837f6138cfbbf153779ca48715d 302 SMART SM00382 29 210 8.7E-8 T 26-04-2016 IPR003593 AAA+ ATPase domain smi_1070 b11a8837f6138cfbbf153779ca48715d 302 PANTHER PTHR24220 6 271 1.9E-86 T 26-04-2016 smi_1070 b11a8837f6138cfbbf153779ca48715d 302 Pfam PF00005 ABC transporter 20 162 4.9E-28 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 smi_1070 b11a8837f6138cfbbf153779ca48715d 302 PANTHER PTHR24220:SF523 6 271 1.9E-86 T 26-04-2016 smi_1070 b11a8837f6138cfbbf153779ca48715d 302 Gene3D G3DSA:3.40.50.300 2 229 3.7E-56 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1070 b11a8837f6138cfbbf153779ca48715d 302 SUPERFAMILY SSF52540 3 221 1.45E-53 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1070 b11a8837f6138cfbbf153779ca48715d 302 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 26-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 smi_1628 7b6ca9eca118ddb604c7a38e4b0b9b51 208 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 5 184 2.2E-72 T 26-04-2016 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 smi_1628 7b6ca9eca118ddb604c7a38e4b0b9b51 208 PANTHER PTHR23117:SF13 1 200 3.9E-94 T 26-04-2016 smi_1628 7b6ca9eca118ddb604c7a38e4b0b9b51 208 Gene3D G3DSA:3.40.50.300 3 27 1.6E-47 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1628 7b6ca9eca118ddb604c7a38e4b0b9b51 208 Gene3D G3DSA:3.40.50.300 88 201 1.6E-47 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1628 7b6ca9eca118ddb604c7a38e4b0b9b51 208 Pfam PF00625 Guanylate kinase 7 186 8.5E-52 T 26-04-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit smi_1628 7b6ca9eca118ddb604c7a38e4b0b9b51 208 SMART SM00072 4 187 1.7E-69 T 26-04-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit smi_1628 7b6ca9eca118ddb604c7a38e4b0b9b51 208 Gene3D G3DSA:3.30.63.10 35 87 8.4E-28 T 26-04-2016 smi_1628 7b6ca9eca118ddb604c7a38e4b0b9b51 208 Hamap MF_00328 Guanylate kinase [gmk]. 3 187 36.798 T 26-04-2016 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 smi_1628 7b6ca9eca118ddb604c7a38e4b0b9b51 208 ProSitePatterns PS00856 Guanylate kinase-like signature. 40 57 - T 26-04-2016 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 smi_1628 7b6ca9eca118ddb604c7a38e4b0b9b51 208 PANTHER PTHR23117 1 200 3.9E-94 T 26-04-2016 smi_1628 7b6ca9eca118ddb604c7a38e4b0b9b51 208 SUPERFAMILY SSF52540 3 189 4.73E-67 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0548 48365be72fe8b7f9975f88c11e2fbed1 219 PANTHER PTHR30487 1 214 5.3E-47 T 26-04-2016 smi_0548 48365be72fe8b7f9975f88c11e2fbed1 219 Pfam PF06750 Bacterial Peptidase A24 N-terminal domain 8 89 1.1E-23 T 26-04-2016 IPR010627 Peptidase A24A, N-terminal KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- smi_0861 446ab507da4e1351f76b1edb6e96e4cb 575 PANTHER PTHR41314 4 575 2.0E-198 T 26-04-2016 smi_0861 446ab507da4e1351f76b1edb6e96e4cb 575 Pfam PF06160 Septation ring formation regulator, EzrA 10 566 4.6E-173 T 26-04-2016 IPR010379 Septation ring formation regulator EzrA GO:0000921|GO:0005940|GO:0016021 smi_0861 446ab507da4e1351f76b1edb6e96e4cb 575 Hamap MF_00728 Septation ring formation regulator EzrA [ezrA]. 7 569 25.81 T 26-04-2016 IPR010379 Septation ring formation regulator EzrA GO:0000921|GO:0005940|GO:0016021 smi_0633 7cc35e3006afe76b4e6ad4bc3a3ed976 163 Pfam PF08534 Redoxin 17 157 6.6E-23 T 26-04-2016 IPR013740 Redoxin GO:0016491 smi_0633 7cc35e3006afe76b4e6ad4bc3a3ed976 163 Gene3D G3DSA:3.40.30.10 2 163 3.5E-49 T 26-04-2016 IPR012336 Thioredoxin-like fold smi_0633 7cc35e3006afe76b4e6ad4bc3a3ed976 163 Hamap MF_00269 Probable thiol peroxidase [tpx]. 1 161 37.091 T 26-04-2016 IPR002065 Putative thiol peroxidase Tpx GO:0008379|GO:0016209|GO:0055114 smi_0633 7cc35e3006afe76b4e6ad4bc3a3ed976 163 SUPERFAMILY SSF52833 2 158 1.66E-42 T 26-04-2016 IPR012336 Thioredoxin-like fold smi_0633 7cc35e3006afe76b4e6ad4bc3a3ed976 163 PANTHER PTHR10681 1 163 6.3E-55 T 26-04-2016 smi_0633 7cc35e3006afe76b4e6ad4bc3a3ed976 163 PANTHER PTHR10681:SF81 1 163 6.3E-55 T 26-04-2016 smi_0633 7cc35e3006afe76b4e6ad4bc3a3ed976 163 ProSitePatterns PS01265 Tpx family signature. 81 92 - T 26-04-2016 IPR018219 Thiol peroxidase conserved site GO:0016684|GO:0055114 smi_0058 9b0df3a0f9301ebc1eb711827715f5fb 448 PANTHER PTHR40448:SF1 1 441 9.6E-43 T 26-04-2016 smi_0058 9b0df3a0f9301ebc1eb711827715f5fb 448 PANTHER PTHR40448 1 441 9.6E-43 T 26-04-2016 smi_0058 9b0df3a0f9301ebc1eb711827715f5fb 448 SUPERFAMILY SSF55874 304 422 6.02E-6 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain smi_0058 9b0df3a0f9301ebc1eb711827715f5fb 448 Pfam PF14501 GHKL domain 341 438 1.4E-11 T 26-04-2016 IPR032834 Sensor histidine kinase NatK, C-terminal domain smi_0058 9b0df3a0f9301ebc1eb711827715f5fb 448 Gene3D G3DSA:3.30.565.10 304 432 6.7E-5 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain smi_1028 f6336155260d08c6cb2b923848be916d 309 PANTHER PTHR10584 1 306 3.8E-216 T 26-04-2016 smi_1028 f6336155260d08c6cb2b923848be916d 309 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 247 260 - T 26-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 smi_1028 f6336155260d08c6cb2b923848be916d 309 Gene3D G3DSA:2.20.150.10 9 34 4.3E-4 T 26-04-2016 IPR023314 Tagatose-6-phosphate kinase/1-phosphofructokinase N-terminal domain KEGG: 00052+2.7.1.144|KEGG: 00710+2.7.1.14|MetaCyc: PWY-7077|MetaCyc: PWY-7395|UniPathway: UPA00704 smi_1028 f6336155260d08c6cb2b923848be916d 309 SUPERFAMILY SSF53613 1 286 1.01E-66 T 26-04-2016 IPR029056 Ribokinase-like smi_1028 f6336155260d08c6cb2b923848be916d 309 PANTHER PTHR10584:SF178 1 306 3.8E-216 T 26-04-2016 smi_1028 f6336155260d08c6cb2b923848be916d 309 PIRSF PIRSF000535 1 309 6.9E-138 T 26-04-2016 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 smi_1028 f6336155260d08c6cb2b923848be916d 309 TIGRFAM TIGR03168 1-PFK: hexose kinase, 1-phosphofructokinase family 2 306 2.1E-93 T 26-04-2016 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 smi_1028 f6336155260d08c6cb2b923848be916d 309 TIGRFAM TIGR01231 lacC: tagatose-6-phosphate kinase 1 309 7.6E-159 T 26-04-2016 IPR005926 Tagatose-6-phosphate kinase GO:0009024|GO:0019512 KEGG: 00052+2.7.1.144|KEGG: 00710+2.7.1.14|MetaCyc: PWY-7077|MetaCyc: PWY-7395|UniPathway: UPA00704 smi_1028 f6336155260d08c6cb2b923848be916d 309 Gene3D G3DSA:3.40.1190.20 35 308 3.9E-82 T 26-04-2016 IPR029056 Ribokinase-like smi_1028 f6336155260d08c6cb2b923848be916d 309 Pfam PF00294 pfkB family carbohydrate kinase 11 291 8.8E-60 T 26-04-2016 IPR011611 Carbohydrate kinase PfkB smi_1028 f6336155260d08c6cb2b923848be916d 309 Hamap MF_01557 Tagatose-6-phosphate kinase [lacC]. 1 309 60.786 T 26-04-2016 IPR005926 Tagatose-6-phosphate kinase GO:0009024|GO:0019512 KEGG: 00052+2.7.1.144|KEGG: 00710+2.7.1.14|MetaCyc: PWY-7077|MetaCyc: PWY-7395|UniPathway: UPA00704 smi_1028 f6336155260d08c6cb2b923848be916d 309 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 36 60 - T 26-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 smi_0912 17cf72df400bbdbbb1bddc78b2a4d7bb 165 PANTHER PTHR21021 1 149 3.1E-46 T 26-04-2016 smi_0912 17cf72df400bbdbbb1bddc78b2a4d7bb 165 Pfam PF13185 GAF domain 48 148 7.0E-10 T 26-04-2016 IPR003018 GAF domain GO:0005515 smi_0912 17cf72df400bbdbbb1bddc78b2a4d7bb 165 SUPERFAMILY SSF55781 3 150 1.72E-37 T 26-04-2016 IPR029016 GAF domain-like smi_0912 17cf72df400bbdbbb1bddc78b2a4d7bb 165 Gene3D G3DSA:3.30.450.40 3 150 1.8E-42 T 26-04-2016 IPR029016 GAF domain-like smi_0943 8bfbdcc1d1a5631a3b2498aa95be5a41 466 Pfam PF11564 Restriction endonuclease BpuJI - N terminal 2 273 9.5E-94 T 26-04-2016 IPR021108 Restriction endonuclease, type II, BpuJI, N-terminal smi_0943 8bfbdcc1d1a5631a3b2498aa95be5a41 466 Pfam PF13020 Domain of unknown function (DUF3883) 329 430 9.1E-16 T 26-04-2016 IPR024975 Domain of unknown function DUF3883 smi_0976 aed22b5dce4a686afec64386806411fd 783 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 66 704 1.5E-181 T 26-04-2016 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 smi_0976 aed22b5dce4a686afec64386806411fd 783 Pfam PF00575 S1 RNA binding domain 624 703 4.0E-14 T 26-04-2016 IPR003029 S1 domain GO:0003676 smi_0976 aed22b5dce4a686afec64386806411fd 783 PANTHER PTHR23355 68 781 1.1E-253 T 26-04-2016 smi_0976 aed22b5dce4a686afec64386806411fd 783 SMART SM00955 250 579 8.1E-171 T 26-04-2016 smi_0976 aed22b5dce4a686afec64386806411fd 783 TIGRFAM TIGR02063 RNase_R: ribonuclease R 2 704 1.6E-243 T 26-04-2016 IPR011805 Ribonuclease R GO:0003723|GO:0004518 smi_0976 aed22b5dce4a686afec64386806411fd 783 SUPERFAMILY SSF50249 211 622 6.28E-142 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold smi_0976 aed22b5dce4a686afec64386806411fd 783 Pfam PF00773 RNB domain 250 576 1.5E-116 T 26-04-2016 smi_0976 aed22b5dce4a686afec64386806411fd 783 SUPERFAMILY SSF50249 625 703 5.67E-17 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold smi_0976 aed22b5dce4a686afec64386806411fd 783 Pfam PF08206 Ribonuclease B OB domain 70 127 2.9E-17 T 26-04-2016 IPR013223 Ribonuclease B, N-terminal OB domain smi_0976 aed22b5dce4a686afec64386806411fd 783 Hamap MF_01895 Ribonuclease R [rnr]. 18 704 55.918 T 26-04-2016 IPR011805 Ribonuclease R GO:0003723|GO:0004518 smi_0976 aed22b5dce4a686afec64386806411fd 783 ProSitePatterns PS01175 Ribonuclease II family signature. 546 570 - T 26-04-2016 IPR022966 Ribonuclease II/R, conserved site smi_0976 aed22b5dce4a686afec64386806411fd 783 SUPERFAMILY SSF50249 67 133 1.18E-12 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold smi_0976 aed22b5dce4a686afec64386806411fd 783 Gene3D G3DSA:2.40.50.140 606 708 1.7E-18 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold smi_0976 aed22b5dce4a686afec64386806411fd 783 SMART SM00316 623 704 6.3E-15 T 26-04-2016 IPR022967 RNA-binding domain, S1 smi_0976 aed22b5dce4a686afec64386806411fd 783 PANTHER PTHR23355:SF9 68 781 1.1E-253 T 26-04-2016 smi_0939 71341d0046ef987c861e691a6a2587ea 296 TIGRFAM TIGR00678 holB: DNA polymerase III, delta' subunit 16 196 7.0E-57 T 26-04-2016 IPR004622 DNA polymerase III, delta prime subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 smi_0939 71341d0046ef987c861e691a6a2587ea 296 Gene3D G3DSA:3.40.50.300 9 164 3.6E-46 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0939 71341d0046ef987c861e691a6a2587ea 296 Pfam PF13177 DNA polymerase III, delta subunit 10 165 3.8E-54 T 26-04-2016 smi_0939 71341d0046ef987c861e691a6a2587ea 296 SUPERFAMILY SSF52540 8 191 1.71E-35 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0939 71341d0046ef987c861e691a6a2587ea 296 PANTHER PTHR11669:SF8 10 172 4.5E-48 T 26-04-2016 smi_0939 71341d0046ef987c861e691a6a2587ea 296 PANTHER PTHR11669 10 172 4.5E-48 T 26-04-2016 smi_1124 57a6ed50b05bcd1760a0709423e90429 143 Gene3D G3DSA:3.40.630.30 1 135 5.9E-29 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase smi_1124 57a6ed50b05bcd1760a0709423e90429 143 SUPERFAMILY SSF55729 1 139 3.49E-25 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase smi_1124 57a6ed50b05bcd1760a0709423e90429 143 PANTHER PTHR23091 1 140 1.4E-19 T 26-04-2016 smi_1124 57a6ed50b05bcd1760a0709423e90429 143 Pfam PF00583 Acetyltransferase (GNAT) family 55 131 2.6E-14 T 26-04-2016 IPR000182 GNAT domain GO:0008080 smi_1124 57a6ed50b05bcd1760a0709423e90429 143 PANTHER PTHR23091:SF237 1 140 1.4E-19 T 26-04-2016 smi_0047 4bc263cab64dd62453ac5438d8f9734a 291 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 12 259 1.6E-18 T 26-04-2016 IPR010106 Conserved hypothetical protein CHP01784 smi_0047 4bc263cab64dd62453ac5438d8f9734a 291 Pfam PF12784 PD-(D/E)XK nuclease family transposase 10 230 1.8E-22 T 26-04-2016 smi_0027 a8626e5cc913231eefef1781b0cd2c92 165 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 16 149 2.2E-13 T 26-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 smi_0027 a8626e5cc913231eefef1781b0cd2c92 165 SUPERFAMILY SSF53254 13 161 2.57E-18 T 26-04-2016 IPR029033 Histidine phosphatase superfamily smi_0027 a8626e5cc913231eefef1781b0cd2c92 165 Gene3D G3DSA:3.40.50.1240 16 149 2.6E-17 T 26-04-2016 IPR029033 Histidine phosphatase superfamily smi_2022 cf1887dd46b02a73fb3d35c9a8a1bf51 299 PANTHER PTHR10264 4 299 1.5E-158 T 26-04-2016 IPR001972 Stomatin family GO:0016020 smi_2022 cf1887dd46b02a73fb3d35c9a8a1bf51 299 SMART SM00244 22 182 3.1E-26 T 26-04-2016 IPR001107 Band 7 domain smi_2022 cf1887dd46b02a73fb3d35c9a8a1bf51 299 PANTHER PTHR10264:SF84 4 299 1.5E-158 T 26-04-2016 smi_2022 cf1887dd46b02a73fb3d35c9a8a1bf51 299 Pfam PF01145 SPFH domain / Band 7 family 26 198 1.9E-28 T 26-04-2016 IPR001107 Band 7 domain smi_2022 cf1887dd46b02a73fb3d35c9a8a1bf51 299 SUPERFAMILY SSF117892 60 188 7.32E-25 T 26-04-2016 IPR001107 Band 7 domain smi_0067 93347e1a869328b5111f101118e77ea0 1241 PANTHER PTHR10099:SF1 2 235 1.1E-284 T 26-04-2016 smi_0067 93347e1a869328b5111f101118e77ea0 1241 PANTHER PTHR10099:SF1 262 1241 1.1E-284 T 26-04-2016 smi_0067 93347e1a869328b5111f101118e77ea0 1241 SMART SM01211 976 1238 8.5E-106 T 26-04-2016 smi_0067 93347e1a869328b5111f101118e77ea0 1241 SUPERFAMILY SSF56042 813 965 8.16E-9 T 26-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain smi_0067 93347e1a869328b5111f101118e77ea0 1241 SUPERFAMILY SSF56042 440 605 4.88E-38 T 26-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain smi_0067 93347e1a869328b5111f101118e77ea0 1241 SUPERFAMILY SSF55326 627 811 6.02E-36 T 26-04-2016 smi_0067 93347e1a869328b5111f101118e77ea0 1241 SUPERFAMILY SSF55326 195 231 5.58E-32 T 26-04-2016 smi_0067 93347e1a869328b5111f101118e77ea0 1241 SUPERFAMILY SSF55326 289 429 5.58E-32 T 26-04-2016 smi_0067 93347e1a869328b5111f101118e77ea0 1241 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 976 1238 1.7E-80 T 26-04-2016 smi_0067 93347e1a869328b5111f101118e77ea0 1241 Gene3D G3DSA:3.30.1330.10 286 430 4.7E-54 T 26-04-2016 IPR016188 PurM-like, N-terminal domain smi_0067 93347e1a869328b5111f101118e77ea0 1241 Gene3D G3DSA:3.30.1330.10 220 235 4.7E-54 T 26-04-2016 IPR016188 PurM-like, N-terminal domain smi_0067 93347e1a869328b5111f101118e77ea0 1241 Gene3D G3DSA:3.30.1330.10 647 806 1.4E-23 T 26-04-2016 IPR016188 PurM-like, N-terminal domain smi_0067 93347e1a869328b5111f101118e77ea0 1241 Gene3D G3DSA:3.40.50.880 979 1217 2.9E-13 T 26-04-2016 IPR029062 Class I glutamine amidotransferase-like smi_0067 93347e1a869328b5111f101118e77ea0 1241 TIGRFAM TIGR01857 FGAM-synthase: phosphoribosylformylglycinamidine synthase 3 1238 0.0 T 26-04-2016 IPR010141 Phosphoribosylformylglycinamidine synthase, FGAM smi_0067 93347e1a869328b5111f101118e77ea0 1241 PANTHER PTHR10099 2 235 1.1E-284 T 26-04-2016 smi_0067 93347e1a869328b5111f101118e77ea0 1241 PANTHER PTHR10099 262 1241 1.1E-284 T 26-04-2016 smi_0067 93347e1a869328b5111f101118e77ea0 1241 Pfam PF02769 AIR synthase related protein, C-terminal domain 439 590 3.1E-24 T 26-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain smi_0067 93347e1a869328b5111f101118e77ea0 1241 SUPERFAMILY SSF52317 974 1238 9.17E-66 T 26-04-2016 IPR029062 Class I glutamine amidotransferase-like smi_2085 c5ed593d5bff25fca1ceb96769655547 40 Pfam PF03047 COMC family 1 27 9.5E-12 T 26-04-2016 IPR004288 Competence protein, ComC GO:0005186 smi_0130 bc554f0eb5d24ae88925eabbc0f7701c 266 Pfam PF06691 Protein of unknown function (DUF1189) 114 252 8.8E-7 T 26-04-2016 IPR009574 Protein of unknown function DUF1189 smi_1030 f75bc2875a63eb1182799b2b42991ae7 172 SUPERFAMILY SSF89623 1 146 1.7E-42 T 26-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 smi_1030 f75bc2875a63eb1182799b2b42991ae7 172 PANTHER PTHR30345 1 172 1.1E-68 T 26-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 smi_1030 f75bc2875a63eb1182799b2b42991ae7 172 TIGRFAM TIGR00689 rpiB_lacA_lacB: sugar-phosphate isomerase, RpiB/LacA/LacB family 3 141 9.6E-35 T 26-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 smi_1030 f75bc2875a63eb1182799b2b42991ae7 172 Gene3D G3DSA:3.40.1400.10 1 146 1.2E-44 T 26-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 smi_1030 f75bc2875a63eb1182799b2b42991ae7 172 PIRSF PIRSF005384 1 148 5.9E-44 T 26-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 smi_1030 f75bc2875a63eb1182799b2b42991ae7 172 Pfam PF02502 Ribose/Galactose Isomerase 3 141 5.8E-37 T 26-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 smi_1030 f75bc2875a63eb1182799b2b42991ae7 172 PANTHER PTHR30345:SF4 1 172 1.1E-68 T 26-04-2016 smi_1429 42f80bcad79736d5ee70638bef38bd45 524 SUPERFAMILY SSF90123 10 305 2.35E-32 T 26-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 smi_1429 42f80bcad79736d5ee70638bef38bd45 524 Pfam PF00664 ABC transporter transmembrane region 14 279 1.1E-7 T 26-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 smi_1429 42f80bcad79736d5ee70638bef38bd45 524 Pfam PF00005 ABC transporter 340 481 5.5E-28 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 smi_1429 42f80bcad79736d5ee70638bef38bd45 524 SMART SM00382 347 523 1.4E-6 T 26-04-2016 IPR003593 AAA+ ATPase domain smi_1429 42f80bcad79736d5ee70638bef38bd45 524 Gene3D G3DSA:1.20.1560.10 10 305 2.6E-22 T 26-04-2016 smi_1429 42f80bcad79736d5ee70638bef38bd45 524 PANTHER PTHR24221 1 495 2.7E-47 T 26-04-2016 smi_1429 42f80bcad79736d5ee70638bef38bd45 524 Gene3D G3DSA:3.40.50.300 324 521 2.0E-44 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1429 42f80bcad79736d5ee70638bef38bd45 524 PANTHER PTHR24221:SF138 1 495 2.7E-47 T 26-04-2016 smi_1429 42f80bcad79736d5ee70638bef38bd45 524 SUPERFAMILY SSF52540 322 519 8.64E-40 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1429 42f80bcad79736d5ee70638bef38bd45 524 ProSitePatterns PS00211 ABC transporters family signature. 453 467 - T 26-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 smi_1163 47b351f162add224d84428524efb52fa 477 Hamap MF_00484 Glycogen synthase [glgA]. 1 475 46.103 T 26-04-2016 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622|UniPathway: UPA00164 smi_1163 47b351f162add224d84428524efb52fa 477 TIGRFAM TIGR02095 glgA: glycogen/starch synthase, ADP-glucose type 1 475 1.9E-186 T 26-04-2016 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622|UniPathway: UPA00164 smi_1163 47b351f162add224d84428524efb52fa 477 PANTHER PTHR12526:SF17 1 477 5.4E-157 T 26-04-2016 smi_1163 47b351f162add224d84428524efb52fa 477 PANTHER PTHR12526 1 477 5.4E-157 T 26-04-2016 smi_1163 47b351f162add224d84428524efb52fa 477 Pfam PF00534 Glycosyl transferases group 1 288 425 1.8E-13 T 26-04-2016 IPR001296 Glycosyl transferase, family 1 smi_1163 47b351f162add224d84428524efb52fa 477 Pfam PF08323 Starch synthase catalytic domain 2 236 4.5E-82 T 26-04-2016 IPR013534 Starch synthase, catalytic domain KEGG: 00500+2.4.1.21|MetaCyc: PWY-622|UniPathway: UPA00164 smi_1163 47b351f162add224d84428524efb52fa 477 Gene3D G3DSA:3.40.50.2000 251 456 8.4E-75 T 26-04-2016 smi_1163 47b351f162add224d84428524efb52fa 477 SUPERFAMILY SSF53756 2 477 1.7E-128 T 26-04-2016 smi_1602 f7c651b1f4e6dbba97340591762069dd 113 SUPERFAMILY SSF47077 3 69 7.06E-5 T 26-04-2016 smi_1602 f7c651b1f4e6dbba97340591762069dd 113 Pfam PF03013 Pyrimidine dimer DNA glycosylase 1 102 2.0E-33 T 26-04-2016 IPR004260 Pyrimidine dimer DNA glycosylase smi_1602 f7c651b1f4e6dbba97340591762069dd 113 TIGRFAM TIGR02328 TIGR02328: conserved hypothetical protein 1 113 1.3E-56 T 26-04-2016 IPR012650 Conserved hypothetical protein CHP02328 smi_1797 80d0a87d83564097931524357488134f 148 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 5 144 8.3E-58 T 26-04-2016 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 smi_1797 80d0a87d83564097931524357488134f 148 ProSitePatterns PS00783 Ribosomal protein L13 signature. 107 129 - T 26-04-2016 IPR023563 Ribosomal protein L13, conserved site GO:0003735|GO:0005840|GO:0006412 smi_1797 80d0a87d83564097931524357488134f 148 PIRSF PIRSF002181 1 147 9.3E-47 T 26-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 smi_1797 80d0a87d83564097931524357488134f 148 Gene3D G3DSA:3.90.1180.10 5 143 9.2E-61 T 26-04-2016 IPR023564 Ribosomal protein L13 domain GO:0003735|GO:0005840|GO:0006412 smi_1797 80d0a87d83564097931524357488134f 148 SUPERFAMILY SSF52161 6 144 7.72E-56 T 26-04-2016 IPR023564 Ribosomal protein L13 domain GO:0003735|GO:0005840|GO:0006412 smi_1797 80d0a87d83564097931524357488134f 148 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 17 143 25.984 T 26-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 smi_1797 80d0a87d83564097931524357488134f 148 PANTHER PTHR11545 4 144 1.8E-68 T 26-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 smi_1797 80d0a87d83564097931524357488134f 148 Pfam PF00572 Ribosomal protein L13 16 140 1.4E-52 T 26-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 smi_1641 2db6fd77135b9d0a1971b63aeb6d1553 301 PANTHER PTHR21535:SF40 12 299 1.2E-46 T 26-04-2016 smi_1641 2db6fd77135b9d0a1971b63aeb6d1553 301 Pfam PF01544 CorA-like Mg2+ transporter protein 10 297 2.2E-54 T 26-04-2016 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 smi_1641 2db6fd77135b9d0a1971b63aeb6d1553 301 PANTHER PTHR21535 12 299 1.2E-46 T 26-04-2016 smi_1641 2db6fd77135b9d0a1971b63aeb6d1553 301 Gene3D G3DSA:3.30.460.20 8 113 3.4E-7 T 26-04-2016 smi_1641 2db6fd77135b9d0a1971b63aeb6d1553 301 SUPERFAMILY SSF143865 8 236 1.06E-32 T 26-04-2016 smi_1641 2db6fd77135b9d0a1971b63aeb6d1553 301 SUPERFAMILY SSF144083 237 297 1.57E-12 T 26-04-2016 smi_1641 2db6fd77135b9d0a1971b63aeb6d1553 301 Gene3D G3DSA:1.20.58.340 228 297 1.6E-15 T 26-04-2016 smi_0681 a6ecd9bd4d951f49b3eb588aa5384d66 447 SUPERFAMILY SSF53623 39 190 1.14E-34 T 26-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 smi_0681 a6ecd9bd4d951f49b3eb588aa5384d66 447 SUPERFAMILY SSF53623 238 296 1.14E-34 T 26-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 smi_0681 a6ecd9bd4d951f49b3eb588aa5384d66 447 Pfam PF08353 Domain of unknown function (DUF1727) 319 429 7.0E-32 T 26-04-2016 IPR013564 Domain of unknown function DUF1727 smi_0681 a6ecd9bd4d951f49b3eb588aa5384d66 447 PANTHER PTHR23135 31 223 4.8E-149 T 26-04-2016 smi_0681 a6ecd9bd4d951f49b3eb588aa5384d66 447 PANTHER PTHR23135 253 447 4.8E-149 T 26-04-2016 smi_0681 a6ecd9bd4d951f49b3eb588aa5384d66 447 Pfam PF08245 Mur ligase middle domain 53 191 1.9E-11 T 26-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 smi_0681 a6ecd9bd4d951f49b3eb588aa5384d66 447 Gene3D G3DSA:3.40.1190.10 237 298 3.7E-41 T 26-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 smi_0681 a6ecd9bd4d951f49b3eb588aa5384d66 447 Gene3D G3DSA:3.40.1190.10 38 189 3.7E-41 T 26-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 smi_0681 a6ecd9bd4d951f49b3eb588aa5384d66 447 PANTHER PTHR23135:SF7 31 223 4.8E-149 T 26-04-2016 smi_0681 a6ecd9bd4d951f49b3eb588aa5384d66 447 PANTHER PTHR23135:SF7 253 447 4.8E-149 T 26-04-2016 smi_1418 cf057d7d0092e6f3c84e2c670f7b42be 209 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 3 209 49.332 T 26-04-2016 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183|UniPathway: UPA00574 smi_1418 cf057d7d0092e6f3c84e2c670f7b42be 209 PANTHER PTHR10285 6 198 4.2E-106 T 26-04-2016 smi_1418 cf057d7d0092e6f3c84e2c670f7b42be 209 Gene3D G3DSA:3.40.50.2020 4 209 1.9E-87 T 26-04-2016 IPR029057 Phosphoribosyltransferase-like smi_1418 cf057d7d0092e6f3c84e2c670f7b42be 209 Pfam PF14681 Uracil phosphoribosyltransferase 6 208 2.5E-78 T 26-04-2016 IPR029057 Phosphoribosyltransferase-like smi_1418 cf057d7d0092e6f3c84e2c670f7b42be 209 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 3 209 1.7E-91 T 26-04-2016 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183|UniPathway: UPA00574 smi_1418 cf057d7d0092e6f3c84e2c670f7b42be 209 SUPERFAMILY SSF53271 5 207 3.41E-74 T 26-04-2016 IPR029057 Phosphoribosyltransferase-like smi_0303 91d1ebc75c327e524fb67b403f8915bf 416 Gene3D G3DSA:3.20.20.10 28 265 7.6E-63 T 26-04-2016 IPR029066 PLP-binding barrel smi_0303 91d1ebc75c327e524fb67b403f8915bf 416 Gene3D G3DSA:2.40.37.10 266 409 2.5E-43 T 26-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 smi_0303 91d1ebc75c327e524fb67b403f8915bf 416 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 283 385 7.9E-12 T 26-04-2016 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 Reactome: REACT_13 smi_0303 91d1ebc75c327e524fb67b403f8915bf 416 PANTHER PTHR11482 6 416 2.1E-136 T 26-04-2016 smi_0303 91d1ebc75c327e524fb67b403f8915bf 416 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 29 278 8.0E-27 T 26-04-2016 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 Reactome: REACT_13 smi_0303 91d1ebc75c327e524fb67b403f8915bf 416 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 366 379 8.5E-12 T 26-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 smi_0303 91d1ebc75c327e524fb67b403f8915bf 416 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 71 83 8.5E-12 T 26-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 smi_0303 91d1ebc75c327e524fb67b403f8915bf 416 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 268 287 8.5E-12 T 26-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 smi_0303 91d1ebc75c327e524fb67b403f8915bf 416 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 51 69 8.5E-12 T 26-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 smi_0303 91d1ebc75c327e524fb67b403f8915bf 416 SUPERFAMILY SSF50621 253 407 1.36E-43 T 26-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 smi_0303 91d1ebc75c327e524fb67b403f8915bf 416 PANTHER PTHR11482:SF5 6 416 2.1E-136 T 26-04-2016 smi_0303 91d1ebc75c327e524fb67b403f8915bf 416 PRINTS PR01181 Diaminopimelate decarboxylase signature 376 398 1.1E-6 T 26-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 smi_0303 91d1ebc75c327e524fb67b403f8915bf 416 PRINTS PR01181 Diaminopimelate decarboxylase signature 69 86 1.1E-6 T 26-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 smi_0303 91d1ebc75c327e524fb67b403f8915bf 416 PRINTS PR01181 Diaminopimelate decarboxylase signature 154 163 1.1E-6 T 26-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 smi_0303 91d1ebc75c327e524fb67b403f8915bf 416 PRINTS PR01181 Diaminopimelate decarboxylase signature 295 313 1.1E-6 T 26-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 smi_0303 91d1ebc75c327e524fb67b403f8915bf 416 SUPERFAMILY SSF51419 19 280 1.06E-58 T 26-04-2016 IPR029066 PLP-binding barrel smi_0702 4a098e0c39874820ccd13f8fc84c5870 272 PANTHER PTHR36832:SF1 1 272 2.4E-109 T 26-04-2016 smi_0702 4a098e0c39874820ccd13f8fc84c5870 272 Pfam PF06182 ABC-2 family transporter protein 38 271 1.7E-23 T 26-04-2016 IPR010390 Protein of unknown function DUF990 smi_0702 4a098e0c39874820ccd13f8fc84c5870 272 PANTHER PTHR36832 1 272 2.4E-109 T 26-04-2016 smi_1036 70607ab4009059dd142c47d42dbfd3e5 278 Gene3D G3DSA:1.10.1790.10 66 165 9.2E-22 T 26-04-2016 IPR011608 PRD domain GO:0006355 smi_1036 70607ab4009059dd142c47d42dbfd3e5 278 Pfam PF03123 CAT RNA binding domain 2 57 5.2E-20 T 26-04-2016 IPR004341 CAT RNA-binding domain GO:0003723 smi_1036 70607ab4009059dd142c47d42dbfd3e5 278 Pfam PF00874 PRD domain 185 275 7.2E-16 T 26-04-2016 IPR011608 PRD domain GO:0006355 smi_1036 70607ab4009059dd142c47d42dbfd3e5 278 Pfam PF00874 PRD domain 77 163 3.8E-17 T 26-04-2016 IPR011608 PRD domain GO:0006355 smi_1036 70607ab4009059dd142c47d42dbfd3e5 278 PANTHER PTHR30185 1 278 3.2E-119 T 26-04-2016 smi_1036 70607ab4009059dd142c47d42dbfd3e5 278 SUPERFAMILY SSF50151 2 54 6.41E-15 T 26-04-2016 IPR004341 CAT RNA-binding domain GO:0003723 smi_1036 70607ab4009059dd142c47d42dbfd3e5 278 SUPERFAMILY SSF63520 56 166 8.89E-24 T 26-04-2016 IPR011608 PRD domain GO:0006355 smi_1036 70607ab4009059dd142c47d42dbfd3e5 278 SUPERFAMILY SSF63520 174 277 6.54E-17 T 26-04-2016 IPR011608 PRD domain GO:0006355 smi_1036 70607ab4009059dd142c47d42dbfd3e5 278 Gene3D G3DSA:1.10.1790.10 181 277 5.2E-20 T 26-04-2016 IPR011608 PRD domain GO:0006355 smi_1036 70607ab4009059dd142c47d42dbfd3e5 278 Gene3D G3DSA:2.30.24.10 2 55 5.2E-21 T 26-04-2016 IPR004341 CAT RNA-binding domain GO:0003723 smi_1036 70607ab4009059dd142c47d42dbfd3e5 278 PANTHER PTHR30185:SF2 1 278 3.2E-119 T 26-04-2016 smi_1036 70607ab4009059dd142c47d42dbfd3e5 278 SMART SM01061 2 60 9.0E-26 T 26-04-2016 IPR004341 CAT RNA-binding domain GO:0003723 smi_2050 4ddd8f4f49f46d63e8e331ac5203a01d 96 PANTHER PTHR33777 1 93 2.1E-18 T 26-04-2016 smi_2050 4ddd8f4f49f46d63e8e331ac5203a01d 96 Gene3D G3DSA:3.30.70.930 1 95 7.8E-37 T 26-04-2016 IPR029756 MTH1187/YkoF-like smi_2050 4ddd8f4f49f46d63e8e331ac5203a01d 96 Pfam PF01910 Thiamine-binding protein 6 91 2.2E-14 T 26-04-2016 IPR002767 Thiamine-binding protein smi_2050 4ddd8f4f49f46d63e8e331ac5203a01d 96 SUPERFAMILY SSF89957 1 94 1.7E-24 T 26-04-2016 IPR029756 MTH1187/YkoF-like smi_0753 ad4026d509fe8ec8d7cd1e409b5dcaed 716 Gene3D G3DSA:3.40.720.10 257 572 4.8E-36 T 26-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 smi_0753 ad4026d509fe8ec8d7cd1e409b5dcaed 716 Pfam PF00884 Sulfatase 257 560 1.9E-34 T 26-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 smi_0753 ad4026d509fe8ec8d7cd1e409b5dcaed 716 PANTHER PTHR10342:SF214 229 584 1.3E-93 T 26-04-2016 smi_0753 ad4026d509fe8ec8d7cd1e409b5dcaed 716 PANTHER PTHR10342 229 584 1.3E-93 T 26-04-2016 smi_0753 ad4026d509fe8ec8d7cd1e409b5dcaed 716 PIRSF PIRSF005091 2 650 9.3E-162 T 26-04-2016 IPR012160 Lipoteichoic acid synthase-like KEGG: 00440+2.7.8.-|KEGG: 00513+2.7.8.-|KEGG: 00540+2.7.8.-|KEGG: 00564+2.7.8.-|KEGG: 00600+2.7.8.-|KEGG: 00770+2.7.8.-|UniPathway: UPA00556 smi_0753 ad4026d509fe8ec8d7cd1e409b5dcaed 716 SUPERFAMILY SSF53649 255 662 3.43E-64 T 26-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 smi_1277 c00e9d74518069f8c26d3feb03456905 404 PANTHER PTHR30521 47 404 6.5E-185 T 26-04-2016 smi_1277 c00e9d74518069f8c26d3feb03456905 404 PANTHER PTHR30521:SF4 47 404 6.5E-185 T 26-04-2016 smi_1277 c00e9d74518069f8c26d3feb03456905 404 TIGRFAM TIGR01412 tat_substr_1: Tat-translocated enzyme 11 403 1.3E-149 T 26-04-2016 IPR006313 Deferrochelatase/peroxidase EfeB GO:0004601|GO:0015684|GO:0020037|GO:0033212 KEGG: 00480+1.11.1.- smi_1277 c00e9d74518069f8c26d3feb03456905 404 SUPERFAMILY SSF54909 59 397 5.01E-89 T 26-04-2016 IPR011008 Dimeric alpha-beta barrel smi_1277 c00e9d74518069f8c26d3feb03456905 404 Pfam PF04261 Dyp-type peroxidase family 64 392 3.8E-106 T 26-04-2016 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 KEGG: 00480+1.11.1.- smi_1277 c00e9d74518069f8c26d3feb03456905 404 TIGRFAM TIGR01413 Dyp_perox_fam: Dyp-type peroxidase family 64 392 1.3E-95 T 26-04-2016 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 KEGG: 00480+1.11.1.- smi_1277 c00e9d74518069f8c26d3feb03456905 404 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 14 38 2.0E-5 T 26-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal smi_1488 a4c93a725d28e87bb002167d3d8678b1 236 PANTHER PTHR31272:SF4 1 236 2.6E-76 T 26-04-2016 smi_1488 a4c93a725d28e87bb002167d3d8678b1 236 PANTHER PTHR31272 1 236 2.6E-76 T 26-04-2016 smi_1488 a4c93a725d28e87bb002167d3d8678b1 236 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 10 225 7.4E-55 T 26-04-2016 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 smi_1377 2b54e28c3a57d918d194267ea701ae53 203 PIRSF PIRSF004749 4 202 3.2E-43 T 26-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 smi_1377 2b54e28c3a57d918d194267ea701ae53 203 Gene3D G3DSA:3.90.45.10 16 199 6.6E-52 T 26-04-2016 IPR023635 Peptide deformylase smi_1377 2b54e28c3a57d918d194267ea701ae53 203 PANTHER PTHR10458:SF8 1 203 1.4E-104 T 26-04-2016 smi_1377 2b54e28c3a57d918d194267ea701ae53 203 SUPERFAMILY SSF56420 5 199 1.2E-60 T 26-04-2016 IPR023635 Peptide deformylase smi_1377 2b54e28c3a57d918d194267ea701ae53 203 Pfam PF01327 Polypeptide deformylase 16 191 1.5E-43 T 26-04-2016 IPR023635 Peptide deformylase smi_1377 2b54e28c3a57d918d194267ea701ae53 203 PRINTS PR01576 Peptide deformylase signature 128 139 7.0E-31 T 26-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 smi_1377 2b54e28c3a57d918d194267ea701ae53 203 PRINTS PR01576 Peptide deformylase signature 160 189 7.0E-31 T 26-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 smi_1377 2b54e28c3a57d918d194267ea701ae53 203 PRINTS PR01576 Peptide deformylase signature 141 159 7.0E-31 T 26-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 smi_1377 2b54e28c3a57d918d194267ea701ae53 203 PRINTS PR01576 Peptide deformylase signature 59 88 7.0E-31 T 26-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 smi_1377 2b54e28c3a57d918d194267ea701ae53 203 Hamap MF_00163 Peptide deformylase [def]. 15 202 25.581 T 26-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 smi_1377 2b54e28c3a57d918d194267ea701ae53 203 PANTHER PTHR10458 1 203 1.4E-104 T 26-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 smi_1377 2b54e28c3a57d918d194267ea701ae53 203 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 17 196 3.0E-38 T 26-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 smi_0724 07c7bb66d16427871044fb097a85e1ad 190 Pfam PF12844 Helix-turn-helix domain 6 57 1.5E-9 T 26-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 smi_0724 07c7bb66d16427871044fb097a85e1ad 190 SMART SM00530 8 62 2.0E-6 T 26-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 smi_0724 07c7bb66d16427871044fb097a85e1ad 190 Gene3D G3DSA:1.10.260.40 2 57 4.6E-9 T 26-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 smi_0724 07c7bb66d16427871044fb097a85e1ad 190 SUPERFAMILY SSF47413 3 57 4.79E-11 T 26-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 smi_0128 3497a38e9013d42e87f2030aae82145f 313 Pfam PF10035 Uncharacterized protein conserved in bacteria (DUF2179) 251 306 7.0E-17 T 26-04-2016 IPR019264 Domain of unknown function DUF2179 smi_0128 3497a38e9013d42e87f2030aae82145f 313 PANTHER PTHR33545 21 308 2.4E-125 T 26-04-2016 smi_0128 3497a38e9013d42e87f2030aae82145f 313 PIRSF PIRSF006483 20 313 7.6E-99 T 26-04-2016 IPR003740 Uncharacterised membrane protein YitT smi_0128 3497a38e9013d42e87f2030aae82145f 313 PANTHER PTHR33545:SF5 21 308 2.4E-125 T 26-04-2016 smi_0128 3497a38e9013d42e87f2030aae82145f 313 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 41 245 3.4E-58 T 26-04-2016 IPR003740 Uncharacterised membrane protein YitT smi_0192 5879b15eacf8d9cfa8be0c2182a3cb4a 425 SUPERFAMILY SSF55931 15 420 9.02E-43 T 26-04-2016 smi_0192 5879b15eacf8d9cfa8be0c2182a3cb4a 425 PANTHER PTHR34378 1 424 6.1E-154 T 26-04-2016 smi_0192 5879b15eacf8d9cfa8be0c2182a3cb4a 425 PANTHER PTHR34378:SF2 1 424 6.1E-154 T 26-04-2016 smi_0726 278e26a86af592a5c8266f9a0e3ad8a6 366 Gene3D G3DSA:2.10.270.10 263 365 5.9E-11 T 26-04-2016 smi_0726 278e26a86af592a5c8266f9a0e3ad8a6 366 PANTHER PTHR33308 207 357 3.4E-31 T 26-04-2016 smi_0726 278e26a86af592a5c8266f9a0e3ad8a6 366 Gene3D G3DSA:2.10.270.10 196 262 3.1E-7 T 26-04-2016 smi_0726 278e26a86af592a5c8266f9a0e3ad8a6 366 SUPERFAMILY SSF69360 142 365 5.42E-19 T 26-04-2016 smi_0726 278e26a86af592a5c8266f9a0e3ad8a6 366 PANTHER PTHR33308:SF3 207 357 3.4E-31 T 26-04-2016 smi_0350 3d7db576f354b3fbfba3cba586cafb95 108 PANTHER PTHR33169:SF13 5 107 5.8E-31 T 26-04-2016 smi_0350 3d7db576f354b3fbfba3cba586cafb95 108 Pfam PF03551 Transcriptional regulator PadR-like family 24 90 8.5E-15 T 26-04-2016 IPR005149 Transcription regulator PadR, N-terminal smi_0350 3d7db576f354b3fbfba3cba586cafb95 108 PANTHER PTHR33169 5 107 5.8E-31 T 26-04-2016 smi_0350 3d7db576f354b3fbfba3cba586cafb95 108 Gene3D G3DSA:1.10.10.10 19 103 6.0E-22 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain smi_0350 3d7db576f354b3fbfba3cba586cafb95 108 SUPERFAMILY SSF46785 20 100 2.27E-18 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain smi_1720 adfb949ebefa902396db38274cdec690 299 PANTHER PTHR37955 1 298 5.5E-94 T 26-04-2016 smi_1720 adfb949ebefa902396db38274cdec690 299 PANTHER PTHR37955:SF1 1 298 5.5E-94 T 26-04-2016 smi_1720 adfb949ebefa902396db38274cdec690 299 Pfam PF03595 Voltage-dependent anion channel 5 289 2.1E-19 T 26-04-2016 IPR004695 Voltage-dependent anion channel GO:0016021|GO:0055085 smi_1128 c3d847178d98f77d717ec10809361dba 159 Pfam PF13673 Acetyltransferase (GNAT) domain 51 151 1.7E-7 T 26-04-2016 IPR000182 GNAT domain GO:0008080 smi_1128 c3d847178d98f77d717ec10809361dba 159 Gene3D G3DSA:3.40.630.30 52 147 4.4E-15 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase smi_1128 c3d847178d98f77d717ec10809361dba 159 Gene3D G3DSA:1.10.287.900 1 39 7.1E-8 T 26-04-2016 IPR027455 Spermine/spermidine acetyltransferase, N-terminal domain KEGG: 00330+2.3.1.57|MetaCyc: PWY-0|MetaCyc: PWY-6117|UniPathway: UPA00188 smi_1128 c3d847178d98f77d717ec10809361dba 159 SUPERFAMILY SSF55729 1 146 1.77E-18 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase smi_1327 60fdbc80684df2a1efdfb67fe07228b3 166 Pfam PF07275 Antirestriction protein (ArdA) 5 162 7.3E-38 T 26-04-2016 IPR009899 Antirestriction smi_1811 fc6b668854514ef70ff250135873d73d 181 Hamap MF_01572 UPF0397 protein . 2 181 27.217 T 26-04-2016 IPR022914 Protein of unknown function UPF0397 smi_1811 fc6b668854514ef70ff250135873d73d 181 Pfam PF07155 ECF-type riboflavin transporter, S component 4 169 1.7E-53 T 26-04-2016 IPR009825 ECF transporter, substrate-specific component-like GO:0016020 smi_1811 fc6b668854514ef70ff250135873d73d 181 PANTHER PTHR37815:SF2 1 181 7.5E-112 T 26-04-2016 smi_1811 fc6b668854514ef70ff250135873d73d 181 PANTHER PTHR37815 1 181 7.5E-112 T 26-04-2016 smi_0736 7614eb0af24e5bdfc083679499bb4f0b 252 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 26-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 smi_0736 7614eb0af24e5bdfc083679499bb4f0b 252 PANTHER PTHR24220 7 249 1.4E-125 T 26-04-2016 smi_0736 7614eb0af24e5bdfc083679499bb4f0b 252 Pfam PF00005 ABC transporter 21 177 1.0E-34 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 smi_0736 7614eb0af24e5bdfc083679499bb4f0b 252 SMART SM00382 30 224 8.8E-11 T 26-04-2016 IPR003593 AAA+ ATPase domain smi_0736 7614eb0af24e5bdfc083679499bb4f0b 252 PANTHER PTHR24220:SF585 7 249 1.4E-125 T 26-04-2016 smi_0736 7614eb0af24e5bdfc083679499bb4f0b 252 SUPERFAMILY SSF52540 4 240 8.83E-57 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0736 7614eb0af24e5bdfc083679499bb4f0b 252 Gene3D G3DSA:3.40.50.300 4 247 2.5E-66 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0736 7614eb0af24e5bdfc083679499bb4f0b 252 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 6 252 1.1E-117 T 26-04-2016 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 smi_0685 1657fe98cfa0ee5009a94c793884bbc9 521 PANTHER PTHR24031:SF261 2 514 5.0E-241 T 26-04-2016 smi_0685 1657fe98cfa0ee5009a94c793884bbc9 521 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 148 156 - T 26-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site smi_0685 1657fe98cfa0ee5009a94c793884bbc9 521 SMART SM00487 20 217 8.1E-64 T 26-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain smi_0685 1657fe98cfa0ee5009a94c793884bbc9 521 PANTHER PTHR24031 2 514 5.0E-241 T 26-04-2016 smi_0685 1657fe98cfa0ee5009a94c793884bbc9 521 Gene3D G3DSA:3.40.50.300 2 207 3.1E-78 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0685 1657fe98cfa0ee5009a94c793884bbc9 521 Pfam PF00270 DEAD/DEAH box helicase 26 190 4.1E-52 T 26-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 smi_0685 1657fe98cfa0ee5009a94c793884bbc9 521 Pfam PF00271 Helicase conserved C-terminal domain 226 334 5.2E-30 T 26-04-2016 IPR001650 Helicase, C-terminal smi_0685 1657fe98cfa0ee5009a94c793884bbc9 521 SUPERFAMILY SSF52540 70 355 4.02E-77 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0685 1657fe98cfa0ee5009a94c793884bbc9 521 Gene3D G3DSA:3.40.50.300 208 366 5.8E-55 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0685 1657fe98cfa0ee5009a94c793884bbc9 521 Hamap MF_01493 DEAD-box ATP-dependent RNA helicase CshA [cshA]. 1 516 45.777 T 26-04-2016 IPR030880 DEAD-box ATP-dependent RNA helicase CshA GO:0004004|GO:0005524|GO:0010501 smi_0685 1657fe98cfa0ee5009a94c793884bbc9 521 SMART SM00490 253 334 1.5E-35 T 26-04-2016 IPR001650 Helicase, C-terminal smi_1562 fb4a6e596d71f51f0d04886719a48ab5 178 Pfam PF00210 Ferritin-like domain 34 175 9.2E-32 T 26-04-2016 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 smi_1562 fb4a6e596d71f51f0d04886719a48ab5 178 PIRSF PIRSF005900 11 178 3.4E-47 T 26-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 smi_1562 fb4a6e596d71f51f0d04886719a48ab5 178 PANTHER PTHR30295 12 176 2.2E-69 T 26-04-2016 smi_1562 fb4a6e596d71f51f0d04886719a48ab5 178 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 54 70 2.6E-14 T 26-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 smi_1562 fb4a6e596d71f51f0d04886719a48ab5 178 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 150 168 2.6E-14 T 26-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 smi_1562 fb4a6e596d71f51f0d04886719a48ab5 178 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 78 94 2.6E-14 T 26-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 smi_1562 fb4a6e596d71f51f0d04886719a48ab5 178 Gene3D G3DSA:1.20.1260.10 29 176 2.7E-55 T 26-04-2016 IPR012347 Ferritin-related smi_1562 fb4a6e596d71f51f0d04886719a48ab5 178 PANTHER PTHR30295:SF6 12 176 2.2E-69 T 26-04-2016 smi_1562 fb4a6e596d71f51f0d04886719a48ab5 178 SUPERFAMILY SSF47240 31 172 7.54E-44 T 26-04-2016 IPR009078 Ferritin-like superfamily smi_0002 e5697752e0b6e2b7a4f626f352341176 378 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 254 376 7.7E-29 T 26-04-2016 IPR022635 DNA polymerase III, beta chain, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 smi_0002 e5697752e0b6e2b7a4f626f352341176 378 Gene3D G3DSA:3.10.150.10 257 378 3.0E-32 T 26-04-2016 smi_0002 e5697752e0b6e2b7a4f626f352341176 378 SMART SM00480 18 373 3.6E-160 T 26-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 smi_0002 e5697752e0b6e2b7a4f626f352341176 378 SUPERFAMILY SSF55979 3 128 4.82E-17 T 26-04-2016 smi_0002 e5697752e0b6e2b7a4f626f352341176 378 SUPERFAMILY SSF55979 133 251 1.49E-24 T 26-04-2016 smi_0002 e5697752e0b6e2b7a4f626f352341176 378 Gene3D G3DSA:3.10.150.10 135 254 3.4E-33 T 26-04-2016 smi_0002 e5697752e0b6e2b7a4f626f352341176 378 PIRSF PIRSF000804 2 378 3.4E-93 T 26-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 smi_0002 e5697752e0b6e2b7a4f626f352341176 378 PANTHER PTHR30478 3 378 3.7E-118 T 26-04-2016 smi_0002 e5697752e0b6e2b7a4f626f352341176 378 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 3 377 2.0E-91 T 26-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 smi_0002 e5697752e0b6e2b7a4f626f352341176 378 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 3 126 5.1E-24 T 26-04-2016 IPR022634 DNA polymerase III, beta chain, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 smi_0002 e5697752e0b6e2b7a4f626f352341176 378 SUPERFAMILY SSF55979 253 377 1.4E-29 T 26-04-2016 smi_0002 e5697752e0b6e2b7a4f626f352341176 378 Pfam PF02767 DNA polymerase III beta subunit, central domain 137 251 3.7E-31 T 26-04-2016 IPR022637 DNA polymerase III, beta chain, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 smi_0002 e5697752e0b6e2b7a4f626f352341176 378 Gene3D G3DSA:3.10.150.10 3 129 5.8E-22 T 26-04-2016 smi_1189 220a53c3e22a9743f53ee9335cadcaf5 229 PANTHER PTHR11922 23 229 3.1E-51 T 26-04-2016 smi_1189 220a53c3e22a9743f53ee9335cadcaf5 229 PANTHER PTHR11922:SF18 23 229 3.1E-51 T 26-04-2016 smi_1189 220a53c3e22a9743f53ee9335cadcaf5 229 Pfam PF07722 Peptidase C26 4 209 1.0E-72 T 26-04-2016 IPR011697 Peptidase C26 GO:0006541|GO:0016787 smi_1189 220a53c3e22a9743f53ee9335cadcaf5 229 SUPERFAMILY SSF52317 22 223 4.88E-32 T 26-04-2016 IPR029062 Class I glutamine amidotransferase-like smi_1189 220a53c3e22a9743f53ee9335cadcaf5 229 Gene3D G3DSA:3.40.50.880 1 228 1.3E-49 T 26-04-2016 IPR029062 Class I glutamine amidotransferase-like smi_1609 35cdf71858d0a0ab574458c2d02248ee 523 PANTHER PTHR30408 175 507 5.7E-129 T 26-04-2016 smi_1609 35cdf71858d0a0ab574458c2d02248ee 523 Pfam PF02384 N-6 DNA Methylase 178 487 2.1E-107 T 26-04-2016 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 smi_1609 35cdf71858d0a0ab574458c2d02248ee 523 Pfam PF12161 HsdM N-terminal domain 12 164 2.0E-19 T 26-04-2016 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain smi_1609 35cdf71858d0a0ab574458c2d02248ee 523 PANTHER PTHR30408:SF4 175 507 5.7E-129 T 26-04-2016 smi_1609 35cdf71858d0a0ab574458c2d02248ee 523 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 304 310 - T 26-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 smi_1609 35cdf71858d0a0ab574458c2d02248ee 523 SUPERFAMILY SSF53335 10 49 1.63E-124 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase smi_1609 35cdf71858d0a0ab574458c2d02248ee 523 SUPERFAMILY SSF53335 87 521 1.63E-124 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase smi_1609 35cdf71858d0a0ab574458c2d02248ee 523 TIGRFAM TIGR00497 hsdM: type I restriction-modification system, M subunit 8 509 6.4E-203 T 26-04-2016 IPR004546 Restriction endonuclease, type I, HsdM GO:0003677|GO:0009007|GO:0009307 smi_1609 35cdf71858d0a0ab574458c2d02248ee 523 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 301 313 8.5E-22 T 26-04-2016 smi_1609 35cdf71858d0a0ab574458c2d02248ee 523 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 202 218 8.5E-22 T 26-04-2016 smi_1609 35cdf71858d0a0ab574458c2d02248ee 523 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 339 363 8.5E-22 T 26-04-2016 smi_1609 35cdf71858d0a0ab574458c2d02248ee 523 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 228 242 8.5E-22 T 26-04-2016 smi_1609 35cdf71858d0a0ab574458c2d02248ee 523 Gene3D G3DSA:3.40.50.150 204 440 5.1E-40 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase smi_1182 f5b52e295a985494fd3171c56a7b980e 223 SUPERFAMILY SSF81301 2 198 2.45E-60 T 26-04-2016 smi_1182 f5b52e295a985494fd3171c56a7b980e 223 Gene3D G3DSA:3.30.460.10 2 145 1.7E-41 T 26-04-2016 smi_1182 f5b52e295a985494fd3171c56a7b980e 223 PANTHER PTHR21262 1 203 2.2E-129 T 26-04-2016 smi_1182 f5b52e295a985494fd3171c56a7b980e 223 Gene3D G3DSA:1.10.287.860 148 202 1.4E-25 T 26-04-2016 smi_1182 f5b52e295a985494fd3171c56a7b980e 223 PANTHER PTHR21262:SF11 1 203 2.2E-129 T 26-04-2016 smi_1182 f5b52e295a985494fd3171c56a7b980e 223 Pfam PF04607 Region found in RelA / SpoT proteins 44 163 4.2E-38 T 26-04-2016 IPR007685 RelA/SpoT GO:0015969 smi_1182 f5b52e295a985494fd3171c56a7b980e 223 SMART SM00954 44 165 2.1E-43 T 26-04-2016 IPR007685 RelA/SpoT GO:0015969 smi_1259 9662a4432e4993c34f08d70354a31b36 288 SMART SM00530 8 62 1.8E-14 T 26-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 smi_1259 9662a4432e4993c34f08d70354a31b36 288 SUPERFAMILY SSF47413 5 67 7.04E-14 T 26-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 smi_1259 9662a4432e4993c34f08d70354a31b36 288 Pfam PF01381 Helix-turn-helix 9 62 3.1E-14 T 26-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 smi_1259 9662a4432e4993c34f08d70354a31b36 288 Gene3D G3DSA:1.10.260.40 5 65 1.7E-16 T 26-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 smi_1259 9662a4432e4993c34f08d70354a31b36 288 Gene3D G3DSA:1.25.40.10 132 286 5.5E-6 T 26-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 smi_0099 fb1d28dea948eb27a491a4de6933aee9 95 Pfam PF04221 RelB antitoxin 8 67 1.1E-6 T 26-04-2016 IPR007337 RelB antitoxin/Antitoxin DinJ smi_0663 3990bfee9a91766894e77afc60ab2bae 778 SUPERFAMILY SSF81653 99 191 2.09E-23 T 26-04-2016 smi_0663 3990bfee9a91766894e77afc60ab2bae 778 Pfam PF00702 haloacid dehalogenase-like hydrolase 293 544 1.4E-27 T 26-04-2016 smi_0663 3990bfee9a91766894e77afc60ab2bae 778 Gene3D G3DSA:1.20.1110.10 51 93 1.8E-41 T 26-04-2016 IPR023298 P-type ATPase, transmembrane domain smi_0663 3990bfee9a91766894e77afc60ab2bae 778 Gene3D G3DSA:1.20.1110.10 499 770 1.8E-41 T 26-04-2016 IPR023298 P-type ATPase, transmembrane domain smi_0663 3990bfee9a91766894e77afc60ab2bae 778 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 298 304 - T 26-04-2016 IPR018303 P-type ATPase, phosphorylation site smi_0663 3990bfee9a91766894e77afc60ab2bae 778 SUPERFAMILY SSF56784 390 632 5.99E-39 T 26-04-2016 IPR023214 HAD-like domain smi_0663 3990bfee9a91766894e77afc60ab2bae 778 SUPERFAMILY SSF56784 294 314 5.99E-39 T 26-04-2016 IPR023214 HAD-like domain smi_0663 3990bfee9a91766894e77afc60ab2bae 778 PANTHER PTHR24093:SF298 358 777 0.0 T 26-04-2016 smi_0663 3990bfee9a91766894e77afc60ab2bae 778 PANTHER PTHR24093:SF298 6 331 0.0 T 26-04-2016 smi_0663 3990bfee9a91766894e77afc60ab2bae 778 Gene3D G3DSA:3.40.1110.10 287 354 2.3E-7 T 26-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 smi_0663 3990bfee9a91766894e77afc60ab2bae 778 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 496 613 1.8E-25 T 26-04-2016 IPR001757 P-type ATPase GO:0016021 smi_0663 3990bfee9a91766894e77afc60ab2bae 778 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 70 479 3.4E-37 T 26-04-2016 IPR001757 P-type ATPase GO:0016021 smi_0663 3990bfee9a91766894e77afc60ab2bae 778 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 432 443 2.6E-19 T 26-04-2016 smi_0663 3990bfee9a91766894e77afc60ab2bae 778 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 296 310 2.6E-19 T 26-04-2016 smi_0663 3990bfee9a91766894e77afc60ab2bae 778 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 530 549 2.6E-19 T 26-04-2016 smi_0663 3990bfee9a91766894e77afc60ab2bae 778 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 553 565 2.6E-19 T 26-04-2016 smi_0663 3990bfee9a91766894e77afc60ab2bae 778 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 454 464 2.6E-19 T 26-04-2016 smi_0663 3990bfee9a91766894e77afc60ab2bae 778 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 145 159 2.6E-19 T 26-04-2016 smi_0663 3990bfee9a91766894e77afc60ab2bae 778 Gene3D G3DSA:2.70.150.10 3 42 2.3E-28 T 26-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 smi_0663 3990bfee9a91766894e77afc60ab2bae 778 Gene3D G3DSA:2.70.150.10 94 192 2.3E-28 T 26-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 smi_0663 3990bfee9a91766894e77afc60ab2bae 778 SUPERFAMILY SSF81665 196 290 9.81E-46 T 26-04-2016 smi_0663 3990bfee9a91766894e77afc60ab2bae 778 SUPERFAMILY SSF81665 579 770 9.81E-46 T 26-04-2016 smi_0663 3990bfee9a91766894e77afc60ab2bae 778 SUPERFAMILY SSF81665 5 99 9.81E-46 T 26-04-2016 smi_0663 3990bfee9a91766894e77afc60ab2bae 778 Pfam PF00122 E1-E2 ATPase 67 287 1.5E-42 T 26-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 smi_0663 3990bfee9a91766894e77afc60ab2bae 778 PANTHER PTHR24093 358 777 0.0 T 26-04-2016 smi_0663 3990bfee9a91766894e77afc60ab2bae 778 PANTHER PTHR24093 6 331 0.0 T 26-04-2016 smi_1813 e622eb0dde8ca7d8a68b07191bdf9f00 449 Gene3D G3DSA:3.40.50.720 226 358 9.3E-26 T 26-04-2016 IPR016040 NAD(P)-binding domain smi_1813 e622eb0dde8ca7d8a68b07191bdf9f00 449 Pfam PF02254 TrkA-N domain 229 343 8.9E-16 T 26-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 smi_1813 e622eb0dde8ca7d8a68b07191bdf9f00 449 Pfam PF02254 TrkA-N domain 3 121 8.7E-22 T 26-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 smi_1813 e622eb0dde8ca7d8a68b07191bdf9f00 449 PANTHER PTHR13789 1 138 1.9E-51 T 26-04-2016 smi_1813 e622eb0dde8ca7d8a68b07191bdf9f00 449 SUPERFAMILY SSF116726 366 446 1.16E-11 T 26-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 smi_1813 e622eb0dde8ca7d8a68b07191bdf9f00 449 Pfam PF02080 TrkA-C domain 383 446 2.6E-9 T 26-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 smi_1813 e622eb0dde8ca7d8a68b07191bdf9f00 449 Pfam PF02080 TrkA-C domain 152 220 8.9E-14 T 26-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 smi_1813 e622eb0dde8ca7d8a68b07191bdf9f00 449 PANTHER PTHR13789:SF225 1 138 1.9E-51 T 26-04-2016 smi_1813 e622eb0dde8ca7d8a68b07191bdf9f00 449 Gene3D G3DSA:3.40.50.720 1 149 1.3E-38 T 26-04-2016 IPR016040 NAD(P)-binding domain smi_1813 e622eb0dde8ca7d8a68b07191bdf9f00 449 Gene3D G3DSA:3.30.70.1450 150 222 7.1E-9 T 26-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 smi_1813 e622eb0dde8ca7d8a68b07191bdf9f00 449 Gene3D G3DSA:3.30.70.1450 380 447 5.0E-7 T 26-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 smi_1813 e622eb0dde8ca7d8a68b07191bdf9f00 449 SUPERFAMILY SSF51735 227 366 3.41E-22 T 26-04-2016 IPR016040 NAD(P)-binding domain smi_1813 e622eb0dde8ca7d8a68b07191bdf9f00 449 SUPERFAMILY SSF51735 1 149 4.84E-32 T 26-04-2016 IPR016040 NAD(P)-binding domain smi_1813 e622eb0dde8ca7d8a68b07191bdf9f00 449 PRINTS PR00335 TrkA potassium uptake protein signature 60 70 3.7E-12 T 26-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 smi_1813 e622eb0dde8ca7d8a68b07191bdf9f00 449 PRINTS PR00335 TrkA potassium uptake protein signature 2 16 3.7E-12 T 26-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 smi_1813 e622eb0dde8ca7d8a68b07191bdf9f00 449 PRINTS PR00335 TrkA potassium uptake protein signature 49 59 3.7E-12 T 26-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 smi_1813 e622eb0dde8ca7d8a68b07191bdf9f00 449 PRINTS PR00335 TrkA potassium uptake protein signature 19 33 3.7E-12 T 26-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 smi_1813 e622eb0dde8ca7d8a68b07191bdf9f00 449 PRINTS PR00335 TrkA potassium uptake protein signature 73 87 3.7E-12 T 26-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 smi_1813 e622eb0dde8ca7d8a68b07191bdf9f00 449 SUPERFAMILY SSF116726 134 220 1.44E-12 T 26-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 smi_1455 5c7e83d0d5992f9e7d1f42dc2f9e1699 111 SUPERFAMILY SSF52821 5 105 1.31E-24 T 26-04-2016 IPR001763 Rhodanese-like domain smi_1455 5c7e83d0d5992f9e7d1f42dc2f9e1699 111 SMART SM00450 13 109 1.6E-14 T 26-04-2016 IPR001763 Rhodanese-like domain smi_1455 5c7e83d0d5992f9e7d1f42dc2f9e1699 111 Gene3D G3DSA:3.40.250.10 13 107 3.8E-22 T 26-04-2016 IPR001763 Rhodanese-like domain smi_1455 5c7e83d0d5992f9e7d1f42dc2f9e1699 111 Pfam PF00581 Rhodanese-like domain 17 105 8.0E-15 T 26-04-2016 IPR001763 Rhodanese-like domain smi_0139 ba40f0ef25c1c093c98447958df040e1 418 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 2 417 7.9E-132 T 26-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 smi_0139 ba40f0ef25c1c093c98447958df040e1 418 SUPERFAMILY SSF52374 2 322 4.44E-110 T 26-04-2016 smi_0139 ba40f0ef25c1c093c98447958df040e1 418 Pfam PF00579 tRNA synthetases class I (W and Y) 28 322 1.7E-83 T 26-04-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 smi_0139 ba40f0ef25c1c093c98447958df040e1 418 Gene3D G3DSA:3.10.290.10 316 418 1.1E-32 T 26-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 smi_0139 ba40f0ef25c1c093c98447958df040e1 418 Pfam PF01479 S4 domain 356 395 2.2E-7 T 26-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 smi_0139 ba40f0ef25c1c093c98447958df040e1 418 Gene3D G3DSA:3.40.50.620 3 231 7.0E-100 T 26-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold smi_0139 ba40f0ef25c1c093c98447958df040e1 418 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 39 49 - T 26-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 smi_0139 ba40f0ef25c1c093c98447958df040e1 418 SMART SM00363 352 414 9.0E-5 T 26-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 smi_0139 ba40f0ef25c1c093c98447958df040e1 418 Hamap MF_02006 Tyrosine--tRNA ligase [tyrS]. 1 418 44.763 T 26-04-2016 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 GO:0004831 KEGG: 00970+6.1.1.1 smi_0139 ba40f0ef25c1c093c98447958df040e1 418 PANTHER PTHR11766 1 415 7.3E-208 T 26-04-2016 IPR024088 Tyrosine-tRNA ligase, bacterial-type GO:0004831 KEGG: 00970+6.1.1.1 smi_0139 ba40f0ef25c1c093c98447958df040e1 418 SUPERFAMILY SSF55174 321 417 3.53E-23 T 26-04-2016 smi_0139 ba40f0ef25c1c093c98447958df040e1 418 Gene3D G3DSA:1.10.240.10 232 315 1.0E-43 T 26-04-2016 smi_0139 ba40f0ef25c1c093c98447958df040e1 418 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 215 227 1.3E-27 T 26-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 smi_0139 ba40f0ef25c1c093c98447958df040e1 418 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 182 204 1.3E-27 T 26-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 smi_0139 ba40f0ef25c1c093c98447958df040e1 418 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 161 176 1.3E-27 T 26-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 smi_0139 ba40f0ef25c1c093c98447958df040e1 418 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 43 65 1.3E-27 T 26-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 smi_0090 af9f7acb23dddabe92ee05301e76d76c 338 Gene3D G3DSA:3.90.550.10 1 207 3.8E-43 T 26-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases smi_0090 af9f7acb23dddabe92ee05301e76d76c 338 PANTHER PTHR22916:SF24 1 269 1.4E-47 T 26-04-2016 smi_0090 af9f7acb23dddabe92ee05301e76d76c 338 SUPERFAMILY SSF53448 3 230 3.64E-39 T 26-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases smi_0090 af9f7acb23dddabe92ee05301e76d76c 338 Pfam PF00535 Glycosyl transferase family 2 5 131 1.7E-25 T 26-04-2016 IPR001173 Glycosyltransferase 2-like smi_0090 af9f7acb23dddabe92ee05301e76d76c 338 PANTHER PTHR22916 1 269 1.4E-47 T 26-04-2016 smi_1697 c4a070ac6b58f075c5591e229314fd4e 319 PANTHER PTHR11019:SF141 19 316 4.3E-25 T 26-04-2016 smi_1697 c4a070ac6b58f075c5591e229314fd4e 319 SUPERFAMILY SSF46689 268 317 3.05E-10 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 smi_1697 c4a070ac6b58f075c5591e229314fd4e 319 PANTHER PTHR11019 19 316 4.3E-25 T 26-04-2016 smi_1697 c4a070ac6b58f075c5591e229314fd4e 319 Gene3D G3DSA:1.10.10.60 269 317 8.2E-15 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 smi_1697 c4a070ac6b58f075c5591e229314fd4e 319 Gene3D G3DSA:1.10.10.60 214 268 1.8E-10 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 smi_1697 c4a070ac6b58f075c5591e229314fd4e 319 SUPERFAMILY SSF46689 218 266 2.51E-7 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 smi_1697 c4a070ac6b58f075c5591e229314fd4e 319 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 284 299 3.3E-6 T 26-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 smi_1697 c4a070ac6b58f075c5591e229314fd4e 319 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 299 315 3.3E-6 T 26-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 smi_1697 c4a070ac6b58f075c5591e229314fd4e 319 Pfam PF12833 Helix-turn-helix domain 242 316 2.0E-17 T 26-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 smi_1697 c4a070ac6b58f075c5591e229314fd4e 319 SMART SM00342 232 315 1.9E-20 T 26-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 smi_1697 c4a070ac6b58f075c5591e229314fd4e 319 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 269 311 - T 26-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 smi_1171 48e832e6f12d98957f9fd37608134423 287 Gene3D G3DSA:1.10.260.40 2 67 1.9E-4 T 26-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 smi_1171 48e832e6f12d98957f9fd37608134423 287 PANTHER PTHR37038:SF1 2 287 1.9E-120 T 26-04-2016 smi_1171 48e832e6f12d98957f9fd37608134423 287 SUPERFAMILY SSF47413 3 62 4.33E-8 T 26-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 smi_1171 48e832e6f12d98957f9fd37608134423 287 TIGRFAM TIGR01716 RGG_Cterm: transcriptional activator, Rgg/GadR/MutR family, C-terminal domain 65 286 9.4E-71 T 26-04-2016 IPR010057 Transcription activator MutR, C-terminal smi_1171 48e832e6f12d98957f9fd37608134423 287 PANTHER PTHR37038 2 287 1.9E-120 T 26-04-2016 smi_1001 e6e38e3eae8514cfdf669160841d4b06 760 SUPERFAMILY SSF49785 552 759 7.01E-73 T 26-04-2016 IPR008979 Galactose-binding domain-like smi_1001 e6e38e3eae8514cfdf669160841d4b06 760 Pfam PF09168 X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal 1 143 1.9E-44 T 26-04-2016 IPR015251 X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal domain GO:0006508|GO:0008239 smi_1001 e6e38e3eae8514cfdf669160841d4b06 760 PANTHER PTHR11731:SF148 436 533 5.4E-56 T 26-04-2016 smi_1001 e6e38e3eae8514cfdf669160841d4b06 760 PANTHER PTHR11731:SF148 263 399 5.4E-56 T 26-04-2016 smi_1001 e6e38e3eae8514cfdf669160841d4b06 760 PANTHER PTHR11731:SF148 167 212 5.4E-56 T 26-04-2016 smi_1001 e6e38e3eae8514cfdf669160841d4b06 760 Gene3D G3DSA:3.40.50.1820 455 540 1.7E-54 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold smi_1001 e6e38e3eae8514cfdf669160841d4b06 760 Gene3D G3DSA:3.40.50.1820 161 213 1.7E-54 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold smi_1001 e6e38e3eae8514cfdf669160841d4b06 760 Gene3D G3DSA:3.40.50.1820 263 381 1.7E-54 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold smi_1001 e6e38e3eae8514cfdf669160841d4b06 760 Hamap MF_00698 Xaa-Pro dipeptidyl-peptidase [pepX]. 1 757 34.828 T 26-04-2016 IPR008252 Peptidase S15, X-Pro dipeptidyl-peptidase GO:0004177|GO:0006508 smi_1001 e6e38e3eae8514cfdf669160841d4b06 760 SUPERFAMILY SSF53474 148 550 4.78E-94 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold smi_1001 e6e38e3eae8514cfdf669160841d4b06 760 SMART SM00939 514 754 1.1E-56 T 26-04-2016 IPR013736 Xaa-Pro dipeptidyl-peptidase, C-terminal GO:0008239 smi_1001 e6e38e3eae8514cfdf669160841d4b06 760 SMART SM00940 1 143 5.8E-69 T 26-04-2016 IPR015251 X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal domain GO:0006508|GO:0008239 smi_1001 e6e38e3eae8514cfdf669160841d4b06 760 PANTHER PTHR11731 436 533 5.4E-56 T 26-04-2016 smi_1001 e6e38e3eae8514cfdf669160841d4b06 760 PANTHER PTHR11731 263 399 5.4E-56 T 26-04-2016 smi_1001 e6e38e3eae8514cfdf669160841d4b06 760 PANTHER PTHR11731 167 212 5.4E-56 T 26-04-2016 smi_1001 e6e38e3eae8514cfdf669160841d4b06 760 Gene3D G3DSA:2.60.120.260 541 638 1.2E-65 T 26-04-2016 IPR008979 Galactose-binding domain-like smi_1001 e6e38e3eae8514cfdf669160841d4b06 760 Gene3D G3DSA:2.60.120.260 677 757 1.2E-65 T 26-04-2016 IPR008979 Galactose-binding domain-like smi_1001 e6e38e3eae8514cfdf669160841d4b06 760 Pfam PF02129 X-Pro dipeptidyl-peptidase (S15 family) 186 500 3.6E-77 T 26-04-2016 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain GO:0016787 smi_1001 e6e38e3eae8514cfdf669160841d4b06 760 Pfam PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain 529 751 2.5E-28 T 26-04-2016 IPR013736 Xaa-Pro dipeptidyl-peptidase, C-terminal GO:0008239 smi_1001 e6e38e3eae8514cfdf669160841d4b06 760 PRINTS PR00923 Lactococcus X-Pro dipeptidyl-peptidase (S15) family signature 200 216 8.7E-37 T 26-04-2016 IPR008252 Peptidase S15, X-Pro dipeptidyl-peptidase GO:0004177|GO:0006508 smi_1001 e6e38e3eae8514cfdf669160841d4b06 760 PRINTS PR00923 Lactococcus X-Pro dipeptidyl-peptidase (S15) family signature 186 195 8.7E-37 T 26-04-2016 IPR008252 Peptidase S15, X-Pro dipeptidyl-peptidase GO:0004177|GO:0006508 smi_1001 e6e38e3eae8514cfdf669160841d4b06 760 PRINTS PR00923 Lactococcus X-Pro dipeptidyl-peptidase (S15) family signature 152 164 8.7E-37 T 26-04-2016 IPR008252 Peptidase S15, X-Pro dipeptidyl-peptidase GO:0004177|GO:0006508 smi_1001 e6e38e3eae8514cfdf669160841d4b06 760 PRINTS PR00923 Lactococcus X-Pro dipeptidyl-peptidase (S15) family signature 168 178 8.7E-37 T 26-04-2016 IPR008252 Peptidase S15, X-Pro dipeptidyl-peptidase GO:0004177|GO:0006508 smi_1001 e6e38e3eae8514cfdf669160841d4b06 760 PRINTS PR00923 Lactococcus X-Pro dipeptidyl-peptidase (S15) family signature 371 387 8.7E-37 T 26-04-2016 IPR008252 Peptidase S15, X-Pro dipeptidyl-peptidase GO:0004177|GO:0006508 smi_1001 e6e38e3eae8514cfdf669160841d4b06 760 PRINTS PR00923 Lactococcus X-Pro dipeptidyl-peptidase (S15) family signature 506 522 8.7E-37 T 26-04-2016 IPR008252 Peptidase S15, X-Pro dipeptidyl-peptidase GO:0004177|GO:0006508 smi_1001 e6e38e3eae8514cfdf669160841d4b06 760 PRINTS PR00923 Lactococcus X-Pro dipeptidyl-peptidase (S15) family signature 722 737 8.7E-37 T 26-04-2016 IPR008252 Peptidase S15, X-Pro dipeptidyl-peptidase GO:0004177|GO:0006508 smi_1001 e6e38e3eae8514cfdf669160841d4b06 760 SUPERFAMILY SSF81761 1 145 6.15E-43 T 26-04-2016 IPR015251 X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal domain GO:0006508|GO:0008239 smi_1190 6d0956d2fbb3895881ee25a2f99eece5 226 Gene3D G3DSA:3.40.140.10 102 223 5.7E-44 T 26-04-2016 smi_1190 6d0956d2fbb3895881ee25a2f99eece5 226 SUPERFAMILY SSF47781 16 92 1.6E-6 T 26-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 smi_1190 6d0956d2fbb3895881ee25a2f99eece5 226 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 174 179 - T 26-04-2016 IPR020891 Uncharacterised protein family UPF0758, conserved site smi_1190 6d0956d2fbb3895881ee25a2f99eece5 226 Pfam PF04002 RadC-like JAB domain 106 222 1.0E-39 T 26-04-2016 IPR025657 RadC-like JAB domain smi_1190 6d0956d2fbb3895881ee25a2f99eece5 226 TIGRFAM TIGR00608 radc: DNA repair protein RadC 13 225 7.7E-71 T 26-04-2016 IPR001405 RadC protein smi_1190 6d0956d2fbb3895881ee25a2f99eece5 226 PANTHER PTHR30471:SF3 1 225 1.5E-100 T 26-04-2016 smi_1190 6d0956d2fbb3895881ee25a2f99eece5 226 PANTHER PTHR30471 1 225 1.5E-100 T 26-04-2016 smi_1168 1a149c027007c4e3eab2190e1c4af7db 759 TIGRFAM TIGR02104 pulA_typeI: pullulanase, type I 122 741 4.0E-245 T 26-04-2016 IPR011840 Pullulanase, type I smi_1168 1a149c027007c4e3eab2190e1c4af7db 759 PANTHER PTHR10357:SF99 506 625 6.1E-174 T 26-04-2016 smi_1168 1a149c027007c4e3eab2190e1c4af7db 759 PANTHER PTHR10357:SF99 117 488 6.1E-174 T 26-04-2016 smi_1168 1a149c027007c4e3eab2190e1c4af7db 759 PANTHER PTHR10357:SF99 641 730 6.1E-174 T 26-04-2016 smi_1168 1a149c027007c4e3eab2190e1c4af7db 759 Pfam PF00128 Alpha amylase, catalytic domain 428 620 3.3E-6 T 26-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 smi_1168 1a149c027007c4e3eab2190e1c4af7db 759 Pfam PF00128 Alpha amylase, catalytic domain 307 397 6.6E-8 T 26-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 smi_1168 1a149c027007c4e3eab2190e1c4af7db 759 PANTHER PTHR10357 506 625 6.1E-174 T 26-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 smi_1168 1a149c027007c4e3eab2190e1c4af7db 759 PANTHER PTHR10357 117 488 6.1E-174 T 26-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 smi_1168 1a149c027007c4e3eab2190e1c4af7db 759 PANTHER PTHR10357 641 730 6.1E-174 T 26-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 smi_1168 1a149c027007c4e3eab2190e1c4af7db 759 SUPERFAMILY SSF51445 253 681 2.63E-109 T 26-04-2016 IPR017853 Glycoside hydrolase superfamily smi_1168 1a149c027007c4e3eab2190e1c4af7db 759 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 131 221 3.4E-10 T 26-04-2016 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 smi_1168 1a149c027007c4e3eab2190e1c4af7db 759 SUPERFAMILY SSF49452 6 95 1.01E-11 T 26-04-2016 IPR013784 Carbohydrate-binding-like fold GO:0030246 smi_1168 1a149c027007c4e3eab2190e1c4af7db 759 SMART SM00642 296 660 4.9E-5 T 26-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 smi_1168 1a149c027007c4e3eab2190e1c4af7db 759 Gene3D G3DSA:2.60.40.10 122 235 2.3E-17 T 26-04-2016 IPR013783 Immunoglobulin-like fold smi_1168 1a149c027007c4e3eab2190e1c4af7db 759 Pfam PF03714 Bacterial pullanase-associated domain 6 94 1.6E-5 T 26-04-2016 IPR005323 Bacterial pullanase-associated domain GO:0005975|GO:0030246 smi_1168 1a149c027007c4e3eab2190e1c4af7db 759 Gene3D G3DSA:3.20.20.80 253 681 1.6E-87 T 26-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 smi_1168 1a149c027007c4e3eab2190e1c4af7db 759 SUPERFAMILY SSF81296 123 237 2.8E-16 T 26-04-2016 IPR014756 Immunoglobulin E-set smi_0734 3c001100cb5202dead5ecf1974075e5e 294 Gene3D G3DSA:1.10.3720.10 58 287 8.2E-41 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 smi_0734 3c001100cb5202dead5ecf1974075e5e 294 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 81 292 1.5E-34 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 smi_0734 3c001100cb5202dead5ecf1974075e5e 294 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 7 283 2.4E-76 T 26-04-2016 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 smi_0734 3c001100cb5202dead5ecf1974075e5e 294 SUPERFAMILY SSF161098 17 276 1.57E-36 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 smi_0734 3c001100cb5202dead5ecf1974075e5e 294 PANTHER PTHR30425:SF0 1 294 1.6E-113 T 26-04-2016 smi_0734 3c001100cb5202dead5ecf1974075e5e 294 PANTHER PTHR30425 1 294 1.6E-113 T 26-04-2016 smi_0880 b63375aa8e3b17fb313aa58c4417ad3d 243 PANTHER PTHR11085 3 241 1.4E-78 T 26-04-2016 IPR003000 Sirtuin family GO:0070403 smi_0880 b63375aa8e3b17fb313aa58c4417ad3d 243 Pfam PF02146 Sir2 family 22 199 9.8E-46 T 26-04-2016 IPR003000 Sirtuin family GO:0070403 smi_0880 b63375aa8e3b17fb313aa58c4417ad3d 243 Gene3D G3DSA:3.40.50.1220 86 123 1.2E-45 T 26-04-2016 IPR029035 DHS-like NAD/FAD-binding domain smi_0880 b63375aa8e3b17fb313aa58c4417ad3d 243 Gene3D G3DSA:3.40.50.1220 2 32 1.2E-45 T 26-04-2016 IPR029035 DHS-like NAD/FAD-binding domain smi_0880 b63375aa8e3b17fb313aa58c4417ad3d 243 Gene3D G3DSA:3.40.50.1220 175 242 1.2E-45 T 26-04-2016 IPR029035 DHS-like NAD/FAD-binding domain smi_0880 b63375aa8e3b17fb313aa58c4417ad3d 243 SUPERFAMILY SSF52467 2 241 4.53E-76 T 26-04-2016 IPR029035 DHS-like NAD/FAD-binding domain smi_0880 b63375aa8e3b17fb313aa58c4417ad3d 243 Gene3D G3DSA:3.30.1600.10 124 169 1.8E-21 T 26-04-2016 IPR026591 Sirtuin family, catalytic core small domain smi_0880 b63375aa8e3b17fb313aa58c4417ad3d 243 Gene3D G3DSA:3.30.1600.10 33 75 1.8E-21 T 26-04-2016 IPR026591 Sirtuin family, catalytic core small domain smi_0827 631026c60392f188ebcbafd7c12e75ca 110 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 22 84 7.0E-8 T 26-04-2016 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core smi_0827 631026c60392f188ebcbafd7c12e75ca 110 SUPERFAMILY SSF101386 3 97 1.57E-16 T 26-04-2016 smi_0827 631026c60392f188ebcbafd7c12e75ca 110 Gene3D G3DSA:1.10.287.1080 2 89 4.0E-21 T 26-04-2016 smi_1459 5b575f7eecf8b521cff4893cea041bb3 671 Pfam PF02687 FtsX-like permease family 63 184 4.7E-11 T 26-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 smi_1459 5b575f7eecf8b521cff4893cea041bb3 671 Pfam PF02687 FtsX-like permease family 557 668 2.1E-7 T 26-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 smi_1459 5b575f7eecf8b521cff4893cea041bb3 671 PANTHER PTHR30489 1 664 1.7E-29 T 26-04-2016 smi_1459 5b575f7eecf8b521cff4893cea041bb3 671 PIRSF PIRSF018968 2 671 1.0E-42 T 26-04-2016 IPR027022 ABC transporter permease protein, BceB-type GO:0006810 smi_1459 5b575f7eecf8b521cff4893cea041bb3 671 PANTHER PTHR30489:SF14 1 664 1.7E-29 T 26-04-2016 smi_1029 dea773d037bdf381ac32dcde57ed7dc3 326 Gene3D G3DSA:3.20.20.70 4 325 2.5E-134 T 26-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 smi_1029 dea773d037bdf381ac32dcde57ed7dc3 326 Pfam PF01791 DeoC/LacD family aldolase 21 282 1.8E-74 T 26-04-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 smi_1029 dea773d037bdf381ac32dcde57ed7dc3 326 SMART SM01133 21 283 5.3E-28 T 26-04-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 smi_1029 dea773d037bdf381ac32dcde57ed7dc3 326 PANTHER PTHR39340:SF1 1 326 1.0E-145 T 26-04-2016 smi_1029 dea773d037bdf381ac32dcde57ed7dc3 326 Hamap MF_00734 Tagatose 1,6-diphosphate aldolase [lacD]. 1 326 212.279 T 26-04-2016 IPR005927 Tagatose 1,6-diphosphate aldolase GO:0009024|GO:0019512 KEGG: 00052+4.1.2.40|MetaCyc: PWY-7077|MetaCyc: PWY-7395|UniPathway: UPA00704 smi_1029 dea773d037bdf381ac32dcde57ed7dc3 326 TIGRFAM TIGR01232 lacD: tagatose 1,6-diphosphate aldolase 3 326 6.3E-203 T 26-04-2016 IPR005927 Tagatose 1,6-diphosphate aldolase GO:0009024|GO:0019512 KEGG: 00052+4.1.2.40|MetaCyc: PWY-7077|MetaCyc: PWY-7395|UniPathway: UPA00704 smi_1029 dea773d037bdf381ac32dcde57ed7dc3 326 SUPERFAMILY SSF51569 7 322 3.59E-67 T 26-04-2016 smi_1029 dea773d037bdf381ac32dcde57ed7dc3 326 PANTHER PTHR39340 1 326 1.0E-145 T 26-04-2016 smi_0817 a2620e14c27d42ecc5431c372d86c0ec 201 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 95 195 1.3E-41 T 26-04-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 smi_0817 a2620e14c27d42ecc5431c372d86c0ec 201 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 163 170 - T 26-04-2016 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 smi_0817 a2620e14c27d42ecc5431c372d86c0ec 201 SUPERFAMILY SSF54719 91 200 1.26E-44 T 26-04-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 smi_0817 a2620e14c27d42ecc5431c372d86c0ec 201 PRINTS PR01703 Manganese superoxide dismutase signature 161 173 1.1E-27 T 26-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 smi_0817 a2620e14c27d42ecc5431c372d86c0ec 201 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 1.1E-27 T 26-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 smi_0817 a2620e14c27d42ecc5431c372d86c0ec 201 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 1.1E-27 T 26-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 smi_0817 a2620e14c27d42ecc5431c372d86c0ec 201 PRINTS PR01703 Manganese superoxide dismutase signature 72 85 1.1E-27 T 26-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 smi_0817 a2620e14c27d42ecc5431c372d86c0ec 201 PRINTS PR01703 Manganese superoxide dismutase signature 124 132 1.1E-27 T 26-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 smi_0817 a2620e14c27d42ecc5431c372d86c0ec 201 Gene3D G3DSA:1.10.287.990 20 89 1.2E-30 T 26-04-2016 smi_0817 a2620e14c27d42ecc5431c372d86c0ec 201 PIRSF PIRSF000349 1 201 4.4E-82 T 26-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 smi_0817 a2620e14c27d42ecc5431c372d86c0ec 201 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 5 88 6.1E-31 T 26-04-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 smi_0817 a2620e14c27d42ecc5431c372d86c0ec 201 PANTHER PTHR11404 5 201 1.8E-99 T 26-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 smi_0817 a2620e14c27d42ecc5431c372d86c0ec 201 SUPERFAMILY SSF46609 1 90 1.31E-35 T 26-04-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 smi_0885 6f1ce9dfe6ada6ad3d0ae65a2b7d6466 130 TIGRFAM TIGR02051 MerR: Hg(II)-responsive transcriptional regulator 4 129 1.8E-57 T 26-04-2016 IPR011794 Hg(II)-responsive transcriptional regulator GO:0003677|GO:0006355|GO:0045340|GO:0046689 smi_0885 6f1ce9dfe6ada6ad3d0ae65a2b7d6466 130 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 39 59 4.8E-14 T 26-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 smi_0885 6f1ce9dfe6ada6ad3d0ae65a2b7d6466 130 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 15 28 4.8E-14 T 26-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 smi_0885 6f1ce9dfe6ada6ad3d0ae65a2b7d6466 130 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 4 15 4.8E-14 T 26-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 smi_0885 6f1ce9dfe6ada6ad3d0ae65a2b7d6466 130 SUPERFAMILY SSF46955 3 129 1.61E-35 T 26-04-2016 IPR009061 Putative DNA-binding domain smi_0885 6f1ce9dfe6ada6ad3d0ae65a2b7d6466 130 PANTHER PTHR30204 1 114 5.2E-32 T 26-04-2016 smi_0885 6f1ce9dfe6ada6ad3d0ae65a2b7d6466 130 PANTHER PTHR30204:SF18 1 114 5.2E-32 T 26-04-2016 smi_0885 6f1ce9dfe6ada6ad3d0ae65a2b7d6466 130 Pfam PF13411 MerR HTH family regulatory protein 3 69 2.4E-19 T 26-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 smi_0885 6f1ce9dfe6ada6ad3d0ae65a2b7d6466 130 SMART SM00422 3 72 6.0E-30 T 26-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 smi_0885 6f1ce9dfe6ada6ad3d0ae65a2b7d6466 130 ProSitePatterns PS00552 MerR-type HTH domain signature. 6 28 - T 26-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 smi_0885 6f1ce9dfe6ada6ad3d0ae65a2b7d6466 130 Gene3D G3DSA:1.10.1660.10 57 129 5.0E-24 T 26-04-2016 smi_0885 6f1ce9dfe6ada6ad3d0ae65a2b7d6466 130 Gene3D G3DSA:1.10.1660.10 2 56 4.2E-26 T 26-04-2016 smi_0682 db7b5ed156383006727d04aa8978b08a 438 PANTHER PTHR22912:SF145 1 438 2.5E-216 T 26-04-2016 smi_0682 db7b5ed156383006727d04aa8978b08a 438 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 327 433 1.1E-24 T 26-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 smi_0682 db7b5ed156383006727d04aa8978b08a 438 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 40 50 - T 26-04-2016 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 smi_0682 db7b5ed156383006727d04aa8978b08a 438 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 122 131 2.5E-49 T 26-04-2016 smi_0682 db7b5ed156383006727d04aa8978b08a 438 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 323 344 2.5E-49 T 26-04-2016 smi_0682 db7b5ed156383006727d04aa8978b08a 438 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 388 403 2.5E-49 T 26-04-2016 smi_0682 db7b5ed156383006727d04aa8978b08a 438 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 243 257 2.5E-49 T 26-04-2016 smi_0682 db7b5ed156383006727d04aa8978b08a 438 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 39 54 2.5E-49 T 26-04-2016 smi_0682 db7b5ed156383006727d04aa8978b08a 438 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 286 293 2.5E-49 T 26-04-2016 smi_0682 db7b5ed156383006727d04aa8978b08a 438 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 410 430 2.5E-49 T 26-04-2016 smi_0682 db7b5ed156383006727d04aa8978b08a 438 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 159 184 2.5E-49 T 26-04-2016 smi_0682 db7b5ed156383006727d04aa8978b08a 438 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 2.5E-49 T 26-04-2016 smi_0682 db7b5ed156383006727d04aa8978b08a 438 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 4 295 3.0E-60 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 smi_0682 db7b5ed156383006727d04aa8978b08a 438 Gene3D G3DSA:3.50.50.60 122 315 2.2E-52 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 smi_0682 db7b5ed156383006727d04aa8978b08a 438 Gene3D G3DSA:3.30.390.30 323 436 6.5E-30 T 26-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 smi_0682 db7b5ed156383006727d04aa8978b08a 438 PIRSF PIRSF000350 2 437 9.0E-74 T 26-04-2016 smi_0682 db7b5ed156383006727d04aa8978b08a 438 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 159 177 4.1E-32 T 26-04-2016 smi_0682 db7b5ed156383006727d04aa8978b08a 438 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 4.1E-32 T 26-04-2016 smi_0682 db7b5ed156383006727d04aa8978b08a 438 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 271 293 4.1E-32 T 26-04-2016 smi_0682 db7b5ed156383006727d04aa8978b08a 438 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 242 258 4.1E-32 T 26-04-2016 smi_0682 db7b5ed156383006727d04aa8978b08a 438 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 119 137 4.1E-32 T 26-04-2016 smi_0682 db7b5ed156383006727d04aa8978b08a 438 SUPERFAMILY SSF51905 1 301 2.2E-50 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 smi_0682 db7b5ed156383006727d04aa8978b08a 438 Gene3D G3DSA:3.50.50.60 3 121 5.8E-25 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 smi_0682 db7b5ed156383006727d04aa8978b08a 438 SUPERFAMILY SSF55424 323 436 1.72E-28 T 26-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 smi_0682 db7b5ed156383006727d04aa8978b08a 438 PANTHER PTHR22912 1 438 2.5E-216 T 26-04-2016 smi_1236 23f6f3f75d4b35a055bcc402c9828ccb 173 SUPERFAMILY SSF53271 5 167 2.62E-36 T 26-04-2016 IPR029057 Phosphoribosyltransferase-like smi_1236 23f6f3f75d4b35a055bcc402c9828ccb 173 Gene3D G3DSA:3.40.50.2020 3 167 3.8E-44 T 26-04-2016 IPR029057 Phosphoribosyltransferase-like smi_1236 23f6f3f75d4b35a055bcc402c9828ccb 173 PANTHER PTHR11608 1 173 1.1E-87 T 26-04-2016 smi_1236 23f6f3f75d4b35a055bcc402c9828ccb 173 Pfam PF00156 Phosphoribosyl transferase domain 4 144 1.9E-20 T 26-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 smi_1236 23f6f3f75d4b35a055bcc402c9828ccb 173 Hamap MF_01219 Bifunctional protein PyrR [pyrR]. 3 171 34.924 T 26-04-2016 IPR023050 Bifunctional protein PyrR KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 smi_0921 6edf1f95aca186a85cf401a194211824 369 PANTHER PTHR21716:SF10 7 366 1.8E-164 T 26-04-2016 smi_0921 6edf1f95aca186a85cf401a194211824 369 PANTHER PTHR21716 7 366 1.8E-164 T 26-04-2016 IPR002549 Transmembrane protein TqsA-like smi_0921 6edf1f95aca186a85cf401a194211824 369 Pfam PF01594 Domain of unknown function DUF20 19 349 7.8E-89 T 26-04-2016 IPR002549 Transmembrane protein TqsA-like smi_0052 8e600d26c9e030ef274888f375521a96 256 SUPERFAMILY SSF57863 82 233 2.35E-38 T 26-04-2016 smi_0052 8e600d26c9e030ef274888f375521a96 256 Hamap MF_00201 DNA repair protein RecO [recO]. 3 244 24.628 T 26-04-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 smi_0052 8e600d26c9e030ef274888f375521a96 256 Pfam PF02565 Recombination protein O C terminal 84 238 1.8E-37 T 26-04-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 smi_0052 8e600d26c9e030ef274888f375521a96 256 Pfam PF11967 Recombination protein O N terminal 4 72 6.0E-16 T 26-04-2016 IPR022572 DNA replication/recombination mediator RecO, N-terminal smi_0052 8e600d26c9e030ef274888f375521a96 256 Gene3D G3DSA:2.40.50.140 5 82 2.0E-6 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold smi_0052 8e600d26c9e030ef274888f375521a96 256 TIGRFAM TIGR00613 reco: DNA repair protein RecO 6 243 1.4E-72 T 26-04-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 smi_0052 8e600d26c9e030ef274888f375521a96 256 PANTHER PTHR33991 3 254 7.0E-59 T 26-04-2016 smi_0052 8e600d26c9e030ef274888f375521a96 256 SUPERFAMILY SSF50249 3 74 3.94E-12 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold smi_2080 3782de9089a0759589a1be4d4ad1cb7a 180 PANTHER PTHR30055:SF55 1 179 2.3E-61 T 26-04-2016 smi_2080 3782de9089a0759589a1be4d4ad1cb7a 180 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 35 58 4.7E-5 T 26-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 smi_2080 3782de9089a0759589a1be4d4ad1cb7a 180 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 14 27 4.7E-5 T 26-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 smi_2080 3782de9089a0759589a1be4d4ad1cb7a 180 SUPERFAMILY SSF46689 6 68 5.67E-14 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 smi_2080 3782de9089a0759589a1be4d4ad1cb7a 180 Gene3D G3DSA:1.10.357.10 6 176 3.1E-20 T 26-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 smi_2080 3782de9089a0759589a1be4d4ad1cb7a 180 PANTHER PTHR30055 1 179 2.3E-61 T 26-04-2016 smi_2080 3782de9089a0759589a1be4d4ad1cb7a 180 Pfam PF00440 Bacterial regulatory proteins, tetR family 19 58 1.5E-7 T 26-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 smi_1451 f6d92647a58af131aec1923737369a4c 673 TIGRFAM TIGR01654 bact_immun_7tm: bacteriocin-associated integral membrane protein 1 672 2.6E-220 T 26-04-2016 IPR006541 Bacteriocin-associated integral membrane protein smi_1451 f6d92647a58af131aec1923737369a4c 673 PIRSF PIRSF031601 1 673 9.7E-205 T 26-04-2016 IPR016976 Uncharacterised conserved protein UCP031601 smi_1451 f6d92647a58af131aec1923737369a4c 673 Pfam PF07242 Protein of unknown function (DUF1430) 573 672 2.9E-27 T 26-04-2016 IPR006541 Bacteriocin-associated integral membrane protein smi_1037 95a8535189708b3a6b698d889bde5f5f 105 SUPERFAMILY SSF46973 1 102 4.84E-34 T 26-04-2016 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- smi_1037 95a8535189708b3a6b698d889bde5f5f 105 Gene3D G3DSA:1.20.58.80 2 102 8.5E-37 T 26-04-2016 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- smi_1037 95a8535189708b3a6b698d889bde5f5f 105 PANTHER PTHR34382:SF3 1 105 7.2E-81 T 26-04-2016 smi_1037 95a8535189708b3a6b698d889bde5f5f 105 PANTHER PTHR34382 1 105 7.2E-81 T 26-04-2016 smi_1037 95a8535189708b3a6b698d889bde5f5f 105 TIGRFAM TIGR00823 EIIA-LAC: PTS system, lactose-specific IIa component 4 102 4.5E-48 T 26-04-2016 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- smi_1037 95a8535189708b3a6b698d889bde5f5f 105 PIRSF PIRSF000699 1 105 9.9E-40 T 26-04-2016 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- smi_1037 95a8535189708b3a6b698d889bde5f5f 105 Pfam PF02255 PTS system, Lactose/Cellobiose specific IIA subunit 10 101 1.4E-33 T 26-04-2016 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- smi_0966 5904d8538c0e831b0c4fa50c93b4398d 570 Gene3D G3DSA:2.10.270.10 217 280 1.7E-13 T 26-04-2016 smi_0966 5904d8538c0e831b0c4fa50c93b4398d 570 Gene3D G3DSA:2.10.270.10 29 106 6.0E-11 T 26-04-2016 smi_0966 5904d8538c0e831b0c4fa50c93b4398d 570 Gene3D G3DSA:2.20.120.10 127 173 1.3E-7 T 26-04-2016 smi_0966 5904d8538c0e831b0c4fa50c93b4398d 570 Gene3D G3DSA:2.20.120.10 175 216 2.8E-5 T 26-04-2016 smi_0966 5904d8538c0e831b0c4fa50c93b4398d 570 SMART SM00047 440 570 1.7E-46 T 26-04-2016 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 smi_0966 5904d8538c0e831b0c4fa50c93b4398d 570 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 453 563 6.2E-20 T 26-04-2016 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 smi_0966 5904d8538c0e831b0c4fa50c93b4398d 570 PANTHER PTHR33308 4 570 4.0E-208 T 26-04-2016 smi_0966 5904d8538c0e831b0c4fa50c93b4398d 570 PANTHER PTHR33308:SF3 4 570 4.0E-208 T 26-04-2016 smi_0966 5904d8538c0e831b0c4fa50c93b4398d 570 SUPERFAMILY SSF69360 179 301 1.31E-23 T 26-04-2016 smi_0966 5904d8538c0e831b0c4fa50c93b4398d 570 SUPERFAMILY SSF69360 30 172 1.41E-22 T 26-04-2016 smi_0966 5904d8538c0e831b0c4fa50c93b4398d 570 Pfam PF01473 Putative cell wall binding repeat 210 227 0.0018 T 26-04-2016 IPR018337 Cell wall/choline-binding repeat smi_0966 5904d8538c0e831b0c4fa50c93b4398d 570 Pfam PF01473 Putative cell wall binding repeat 88 105 0.0028 T 26-04-2016 IPR018337 Cell wall/choline-binding repeat smi_0966 5904d8538c0e831b0c4fa50c93b4398d 570 Pfam PF01473 Putative cell wall binding repeat 252 271 1.1E-4 T 26-04-2016 IPR018337 Cell wall/choline-binding repeat smi_0966 5904d8538c0e831b0c4fa50c93b4398d 570 Pfam PF01473 Putative cell wall binding repeat 149 166 0.0082 T 26-04-2016 IPR018337 Cell wall/choline-binding repeat smi_0966 5904d8538c0e831b0c4fa50c93b4398d 570 Pfam PF01473 Putative cell wall binding repeat 230 248 6.2E-5 T 26-04-2016 IPR018337 Cell wall/choline-binding repeat smi_0966 5904d8538c0e831b0c4fa50c93b4398d 570 Pfam PF01473 Putative cell wall binding repeat 66 84 0.41 T 26-04-2016 IPR018337 Cell wall/choline-binding repeat smi_1583 1c36574e5bf8309991ecd744aa015e32 410 PANTHER PTHR36174:SF2 1 410 3.6E-196 T 26-04-2016 smi_1583 1c36574e5bf8309991ecd744aa015e32 410 PANTHER PTHR36174 1 410 3.6E-196 T 26-04-2016 smi_1583 1c36574e5bf8309991ecd744aa015e32 410 Gene3D G3DSA:3.40.630.30 162 238 1.2E-44 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase smi_1583 1c36574e5bf8309991ecd744aa015e32 410 Gene3D G3DSA:3.40.630.30 305 382 1.2E-44 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase smi_1583 1c36574e5bf8309991ecd744aa015e32 410 Gene3D G3DSA:3.40.630.30 1 161 6.6E-46 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase smi_1583 1c36574e5bf8309991ecd744aa015e32 410 SUPERFAMILY SSF55729 1 158 3.97E-43 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase smi_1583 1c36574e5bf8309991ecd744aa015e32 410 Pfam PF02388 FemAB family 6 406 2.3E-141 T 26-04-2016 IPR003447 FemABX peptidyl transferase GO:0009252|GO:0016755 smi_1583 1c36574e5bf8309991ecd744aa015e32 410 SUPERFAMILY SSF55729 306 403 8.12E-28 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase smi_1583 1c36574e5bf8309991ecd744aa015e32 410 SUPERFAMILY SSF55729 163 239 8.12E-28 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase smi_1583 1c36574e5bf8309991ecd744aa015e32 410 SUPERFAMILY SSF46589 239 303 5.75E-17 T 26-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 smi_0327 bb0c1b606a5a293ae0f6fea763e1a5eb 325 PANTHER PTHR35271 5 320 1.6E-64 T 26-04-2016 smi_0327 bb0c1b606a5a293ae0f6fea763e1a5eb 325 SUPERFAMILY SSF53822 71 307 4.71E-13 T 26-04-2016 IPR028082 Periplasmic binding protein-like I smi_0327 bb0c1b606a5a293ae0f6fea763e1a5eb 325 Gene3D G3DSA:3.40.50.2300 166 297 4.4E-50 T 26-04-2016 smi_0327 bb0c1b606a5a293ae0f6fea763e1a5eb 325 Pfam PF04392 ABC transporter substrate binding protein 37 320 3.8E-86 T 26-04-2016 IPR007487 ABC transporter, substrate-binding protein smi_0327 bb0c1b606a5a293ae0f6fea763e1a5eb 325 Gene3D G3DSA:3.40.50.2300 35 165 2.2E-55 T 26-04-2016 smi_2017 2aa79cfe4ce2ed75d1a0565042ab6501 388 PANTHER PTHR30349:SF20 66 379 2.0E-36 T 26-04-2016 smi_2017 2aa79cfe4ce2ed75d1a0565042ab6501 388 Gene3D G3DSA:1.10.443.10 186 378 4.8E-40 T 26-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 smi_2017 2aa79cfe4ce2ed75d1a0565042ab6501 388 Pfam PF14659 Phage integrase, N-terminal SAM-like domain 71 125 7.0E-16 T 26-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 smi_2017 2aa79cfe4ce2ed75d1a0565042ab6501 388 Pfam PF00589 Phage integrase family 186 371 9.5E-27 T 26-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 smi_2017 2aa79cfe4ce2ed75d1a0565042ab6501 388 SUPERFAMILY SSF56349 71 378 4.12E-58 T 26-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 smi_2017 2aa79cfe4ce2ed75d1a0565042ab6501 388 Gene3D G3DSA:1.10.150.130 71 174 4.1E-13 T 26-04-2016 IPR023109 Integrase/recombinase, N-terminal smi_2017 2aa79cfe4ce2ed75d1a0565042ab6501 388 PANTHER PTHR30349 66 379 2.0E-36 T 26-04-2016 smi_0210 10b94aad8834cfa4e08ab5bf1c433eff 153 Pfam PF15980 Putative Competence protein ComGF 45 141 5.6E-26 T 26-04-2016 IPR016977 Competence operon G, ComGF smi_0210 10b94aad8834cfa4e08ab5bf1c433eff 153 PIRSF PIRSF031611 1 152 7.5E-66 T 26-04-2016 IPR016977 Competence operon G, ComGF smi_1388 263967bcb3fe670bc03b381f01144730 193 ProSitePatterns PS01236 PdxT/SNO family family signature. 44 54 - T 26-04-2016 IPR021196 PdxT/SNO family, conserved site KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466|UniPathway: UPA00245 smi_1388 263967bcb3fe670bc03b381f01144730 193 PANTHER PTHR31559 1 191 6.4E-86 T 26-04-2016 smi_1388 263967bcb3fe670bc03b381f01144730 193 PANTHER PTHR31559:SF0 1 191 6.4E-86 T 26-04-2016 smi_1388 263967bcb3fe670bc03b381f01144730 193 Gene3D G3DSA:3.40.50.880 1 192 7.9E-73 T 26-04-2016 IPR029062 Class I glutamine amidotransferase-like smi_1388 263967bcb3fe670bc03b381f01144730 193 Pfam PF01174 SNO glutamine amidotransferase family 5 190 3.9E-54 T 26-04-2016 IPR002161 Pyridoxal 5'-phosphate synthase subunit PdxT/SNO GO:0004359|GO:0042819|GO:0042823 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466|UniPathway: UPA00245 smi_1388 263967bcb3fe670bc03b381f01144730 193 TIGRFAM TIGR03800 PLP_synth_Pdx2: pyridoxal 5'-phosphate synthase, glutaminase subunit Pdx2 2 187 4.4E-82 T 26-04-2016 IPR002161 Pyridoxal 5'-phosphate synthase subunit PdxT/SNO GO:0004359|GO:0042819|GO:0042823 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466|UniPathway: UPA00245 smi_1388 263967bcb3fe670bc03b381f01144730 193 PIRSF PIRSF005639 1 193 3.8E-70 T 26-04-2016 IPR002161 Pyridoxal 5'-phosphate synthase subunit PdxT/SNO GO:0004359|GO:0042819|GO:0042823 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466|UniPathway: UPA00245 smi_1388 263967bcb3fe670bc03b381f01144730 193 Hamap MF_01615 Pyridoxal 5'-phosphate synthase subunit PdxT [pdxT]. 3 188 36.124 T 26-04-2016 IPR002161 Pyridoxal 5'-phosphate synthase subunit PdxT/SNO GO:0004359|GO:0042819|GO:0042823 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466|UniPathway: UPA00245 smi_1388 263967bcb3fe670bc03b381f01144730 193 SUPERFAMILY SSF52317 2 191 3.51E-47 T 26-04-2016 IPR029062 Class I glutamine amidotransferase-like smi_0592 065c2fde36ee7f9f98cc59735cfa9a25 122 Gene3D G3DSA:3.90.470.20 3 118 1.0E-35 T 26-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 smi_0592 065c2fde36ee7f9f98cc59735cfa9a25 122 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 4 118 3.0E-27 T 26-04-2016 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 smi_0592 065c2fde36ee7f9f98cc59735cfa9a25 122 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 8 102 4.5E-21 T 26-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 smi_0592 065c2fde36ee7f9f98cc59735cfa9a25 122 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 5 118 23.376 T 26-04-2016 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 smi_0592 065c2fde36ee7f9f98cc59735cfa9a25 122 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 10 118 2.0E-55 T 26-04-2016 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 smi_0592 065c2fde36ee7f9f98cc59735cfa9a25 122 SUPERFAMILY SSF56214 3 118 3.27E-35 T 26-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 smi_0592 065c2fde36ee7f9f98cc59735cfa9a25 122 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 3 119 1.7E-25 T 26-04-2016 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 smi_0396 b788d955f7254ae9df10948efa90b72d 191 SUPERFAMILY SSF46689 6 75 9.75E-10 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 smi_0396 b788d955f7254ae9df10948efa90b72d 191 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 57 3.9E-7 T 26-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 smi_0396 b788d955f7254ae9df10948efa90b72d 191 PANTHER PTHR30055:SF90 1 109 3.9E-12 T 26-04-2016 smi_0396 b788d955f7254ae9df10948efa90b72d 191 SUPERFAMILY SSF48498 78 169 2.22E-10 T 26-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal smi_0396 b788d955f7254ae9df10948efa90b72d 191 Pfam PF13305 WHG domain 81 164 1.6E-12 T 26-04-2016 IPR025996 WHG domain smi_0396 b788d955f7254ae9df10948efa90b72d 191 PANTHER PTHR30055 1 109 3.9E-12 T 26-04-2016 smi_0396 b788d955f7254ae9df10948efa90b72d 191 Gene3D G3DSA:1.10.357.10 9 179 7.4E-23 T 26-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 smi_0196 a0016e8e9cfadd64d4aba674f2f02d5f 400 SUPERFAMILY SSF54106 47 90 1.96E-7 T 26-04-2016 IPR018392 LysM domain smi_0196 a0016e8e9cfadd64d4aba674f2f02d5f 400 Gene3D G3DSA:3.40.190.10 328 352 6.3E-4 T 26-04-2016 smi_0196 a0016e8e9cfadd64d4aba674f2f02d5f 400 Gene3D G3DSA:3.40.190.10 108 146 6.3E-4 T 26-04-2016 smi_0196 a0016e8e9cfadd64d4aba674f2f02d5f 400 Pfam PF01476 LysM domain 49 90 1.3E-7 T 26-04-2016 IPR018392 LysM domain smi_0196 a0016e8e9cfadd64d4aba674f2f02d5f 400 SMART SM00257 48 92 4.5E-8 T 26-04-2016 IPR018392 LysM domain smi_0196 a0016e8e9cfadd64d4aba674f2f02d5f 400 Gene3D G3DSA:3.10.350.10 47 90 9.6E-11 T 26-04-2016 IPR018392 LysM domain smi_1369 633ad1218b821414c6e1ee97f37022e6 47 SUPERFAMILY SSF50118 1 46 1.16E-7 T 26-04-2016 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor smi_1369 633ad1218b821414c6e1ee97f37022e6 47 Pfam PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system 4 46 9.3E-6 T 26-04-2016 IPR003477 mRNA interferase PemK-like protein GO:0003677 smi_1369 633ad1218b821414c6e1ee97f37022e6 47 Gene3D G3DSA:2.30.30.110 2 46 3.9E-8 T 26-04-2016 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor smi_1494 33ff8b165089868a7410ad01600327e5 71 PANTHER PTHR10245:SF56 6 69 5.8E-39 T 26-04-2016 smi_1494 33ff8b165089868a7410ad01600327e5 71 SMART SM00530 8 63 3.8E-16 T 26-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 smi_1494 33ff8b165089868a7410ad01600327e5 71 Gene3D G3DSA:1.10.260.40 8 68 7.4E-22 T 26-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 smi_1494 33ff8b165089868a7410ad01600327e5 71 SUPERFAMILY SSF47413 7 69 3.75E-18 T 26-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 smi_1494 33ff8b165089868a7410ad01600327e5 71 Pfam PF01381 Helix-turn-helix 9 63 1.7E-15 T 26-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 smi_1494 33ff8b165089868a7410ad01600327e5 71 PANTHER PTHR10245 6 69 5.8E-39 T 26-04-2016 smi_1903 f9d0295e9575bf395e14647d91bec1bf 98 ProSitePatterns PS00050 Ribosomal protein L23 signature. 77 92 - T 26-04-2016 IPR001014 Ribosomal protein L23/L25, conserved site smi_1903 f9d0295e9575bf395e14647d91bec1bf 98 PANTHER PTHR11620 1 93 4.8E-27 T 26-04-2016 smi_1903 f9d0295e9575bf395e14647d91bec1bf 98 SUPERFAMILY SSF54189 1 91 1.91E-27 T 26-04-2016 IPR012678 Ribosomal protein L23/L15e core domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_1903 f9d0295e9575bf395e14647d91bec1bf 98 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 4 95 20.314 T 26-04-2016 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 smi_1903 f9d0295e9575bf395e14647d91bec1bf 98 Pfam PF00276 Ribosomal protein L23 5 88 2.4E-27 T 26-04-2016 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 smi_1903 f9d0295e9575bf395e14647d91bec1bf 98 Gene3D G3DSA:3.30.70.330 1 93 8.5E-31 T 26-04-2016 IPR012677 Nucleotide-binding alpha-beta plait domain GO:0000166 smi_0268 7f30e1c5500befbd2769e8f16b88bccf 443 ProSitePatterns PS00639 Eukaryotic thiol (cysteine) proteases histidine active site. 361 371 - T 26-04-2016 IPR025660 Cysteine peptidase, histidine active site smi_0268 7f30e1c5500befbd2769e8f16b88bccf 443 Pfam PF03051 Peptidase C1-like family 4 440 1.9E-209 T 26-04-2016 IPR004134 Peptidase C1B, bleomycin hydrolase GO:0004197|GO:0006508 smi_0268 7f30e1c5500befbd2769e8f16b88bccf 443 PANTHER PTHR10363:SF4 4 443 1.1E-297 T 26-04-2016 smi_0268 7f30e1c5500befbd2769e8f16b88bccf 443 Gene3D G3DSA:3.90.70.10 51 443 2.3E-174 T 26-04-2016 smi_0268 7f30e1c5500befbd2769e8f16b88bccf 443 PIRSF PIRSF005700 1 443 6.1E-181 T 26-04-2016 IPR004134 Peptidase C1B, bleomycin hydrolase GO:0004197|GO:0006508 smi_0268 7f30e1c5500befbd2769e8f16b88bccf 443 PANTHER PTHR10363 4 443 1.1E-297 T 26-04-2016 IPR004134 Peptidase C1B, bleomycin hydrolase GO:0004197|GO:0006508 smi_0268 7f30e1c5500befbd2769e8f16b88bccf 443 SUPERFAMILY SSF54001 11 443 1.89E-128 T 26-04-2016 smi_0268 7f30e1c5500befbd2769e8f16b88bccf 443 ProSitePatterns PS00139 Eukaryotic thiol (cysteine) proteases cysteine active site. 63 74 - T 26-04-2016 IPR000169 Cysteine peptidase, cysteine active site smi_0552 c0bb28ded615153e9909fc03ac05f44b 56 Pfam PF10031 Small integral membrane protein (DUF2273) 3 49 3.0E-15 T 26-04-2016 IPR018730 Protein of unknown function DUF2273 smi_1079 97d970204ef5259550f583137bc12de4 90 PANTHER PTHR33885 1 81 4.6E-25 T 26-04-2016 smi_1079 97d970204ef5259550f583137bc12de4 90 Pfam PF04024 PspC domain 4 60 1.5E-16 T 26-04-2016 IPR007168 Phage shock protein, PspC, N-terminal smi_1938 52c1d304cb8036dde1da15c07070348e 560 Pfam PF06580 Histidine kinase 351 428 1.0E-20 T 26-04-2016 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 smi_1938 52c1d304cb8036dde1da15c07070348e 560 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 449 555 9.8E-5 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain smi_1938 52c1d304cb8036dde1da15c07070348e 560 PANTHER PTHR34220 518 558 9.3E-70 T 26-04-2016 smi_1938 52c1d304cb8036dde1da15c07070348e 560 PANTHER PTHR34220 320 501 9.3E-70 T 26-04-2016 smi_1938 52c1d304cb8036dde1da15c07070348e 560 SUPERFAMILY SSF55874 436 556 2.75E-10 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain smi_1938 52c1d304cb8036dde1da15c07070348e 560 Gene3D G3DSA:3.30.565.10 438 557 3.8E-12 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain smi_0905 b420630822a009935fce8225f668387d 823 Gene3D G3DSA:3.30.1360.40 232 328 3.9E-35 T 26-04-2016 IPR024946 Arginine repressor C-terminal-like domain smi_0905 b420630822a009935fce8225f668387d 823 PANTHER PTHR10169 4 811 0.0 T 26-04-2016 smi_0905 b420630822a009935fce8225f668387d 823 SUPERFAMILY SSF101904 496 818 1.96E-76 T 26-04-2016 smi_0905 b420630822a009935fce8225f668387d 823 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 654 701 6.8E-14 T 26-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 smi_0905 b420630822a009935fce8225f668387d 823 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 504 520 3.9 T 26-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 smi_0905 b420630822a009935fce8225f668387d 823 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 606 651 5.3E-4 T 26-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 smi_0905 b420630822a009935fce8225f668387d 823 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 707 741 7.2E-5 T 26-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 smi_0905 b420630822a009935fce8225f668387d 823 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 546 597 4.3E-4 T 26-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 smi_0905 b420630822a009935fce8225f668387d 823 SMART SM00434 7 460 2.3E-259 T 26-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 smi_0905 b420630822a009935fce8225f668387d 823 Gene3D G3DSA:3.90.199.10 329 394 4.3E-114 T 26-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 smi_0905 b420630822a009935fce8225f668387d 823 Gene3D G3DSA:3.90.199.10 26 231 4.3E-114 T 26-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 smi_0905 b420630822a009935fce8225f668387d 823 Hamap MF_00937 DNA topoisomerase 4 subunit A [parC]. 3 816 34.298 T 26-04-2016 IPR005741 DNA topoisomerase IV subunit A, Gram-positive GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 smi_0905 b420630822a009935fce8225f668387d 823 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 28 467 8.2E-148 T 26-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 smi_0905 b420630822a009935fce8225f668387d 823 TIGRFAM TIGR01061 parC_Gpos: DNA topoisomerase IV, A subunit 4 743 0.0 T 26-04-2016 IPR005741 DNA topoisomerase IV subunit A, Gram-positive GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 smi_0905 b420630822a009935fce8225f668387d 823 PANTHER PTHR10169:SF47 4 811 0.0 T 26-04-2016 smi_0905 b420630822a009935fce8225f668387d 823 SUPERFAMILY SSF56719 27 479 1.57E-164 T 26-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 smi_0905 b420630822a009935fce8225f668387d 823 Gene3D G3DSA:2.120.10.90 495 812 5.1E-74 T 26-04-2016 smi_1143 7dd322256b7181a003b328002107b048 305 SUPERFAMILY SSF53807 15 305 3.24E-76 T 26-04-2016 smi_1143 7dd322256b7181a003b328002107b048 305 Pfam PF01297 Zinc-uptake complex component A periplasmic 34 302 9.5E-68 T 26-04-2016 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 smi_1143 7dd322256b7181a003b328002107b048 305 Gene3D G3DSA:3.40.50.1980 19 189 8.7E-50 T 26-04-2016 smi_1143 7dd322256b7181a003b328002107b048 305 PANTHER PTHR30477 1 304 5.1E-174 T 26-04-2016 smi_1143 7dd322256b7181a003b328002107b048 305 PRINTS PR00691 Adhesin B signature 220 238 5.3E-10 T 26-04-2016 IPR006129 Adhesin B GO:0007155 smi_1143 7dd322256b7181a003b328002107b048 305 PRINTS PR00691 Adhesin B signature 243 260 5.3E-10 T 26-04-2016 IPR006129 Adhesin B GO:0007155 smi_1143 7dd322256b7181a003b328002107b048 305 PRINTS PR00691 Adhesin B signature 31 52 5.3E-10 T 26-04-2016 IPR006129 Adhesin B GO:0007155 smi_1143 7dd322256b7181a003b328002107b048 305 PRINTS PR00691 Adhesin B signature 194 211 5.3E-10 T 26-04-2016 IPR006129 Adhesin B GO:0007155 smi_1143 7dd322256b7181a003b328002107b048 305 PRINTS PR00691 Adhesin B signature 74 93 5.3E-10 T 26-04-2016 IPR006129 Adhesin B GO:0007155 smi_1143 7dd322256b7181a003b328002107b048 305 PRINTS PR00691 Adhesin B signature 138 157 5.3E-10 T 26-04-2016 IPR006129 Adhesin B GO:0007155 smi_1143 7dd322256b7181a003b328002107b048 305 PANTHER PTHR30477:SF10 1 304 5.1E-174 T 26-04-2016 smi_1143 7dd322256b7181a003b328002107b048 305 Gene3D G3DSA:3.40.50.1980 190 305 3.5E-37 T 26-04-2016 smi_1143 7dd322256b7181a003b328002107b048 305 PRINTS PR00690 Adhesin family signature 61 74 1.7E-12 T 26-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 smi_1143 7dd322256b7181a003b328002107b048 305 PRINTS PR00690 Adhesin family signature 31 49 1.7E-12 T 26-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 smi_1143 7dd322256b7181a003b328002107b048 305 PRINTS PR00690 Adhesin family signature 74 91 1.7E-12 T 26-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 smi_1143 7dd322256b7181a003b328002107b048 305 PRINTS PR00690 Adhesin family signature 247 265 1.7E-12 T 26-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 smi_1143 7dd322256b7181a003b328002107b048 305 PRINTS PR00690 Adhesin family signature 194 215 1.7E-12 T 26-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 smi_0760 20f80aea076c4beb71dc1437e5af776e 112 Hamap MF_01526 UPF0342 protein . 1 112 17.123 T 26-04-2016 IPR010368 Control of competence regulator ComK, YlbF/YmcA smi_0760 20f80aea076c4beb71dc1437e5af776e 112 SUPERFAMILY SSF158622 1 110 3.01E-29 T 26-04-2016 IPR023378 YheA/YmcA-like domain smi_0760 20f80aea076c4beb71dc1437e5af776e 112 Gene3D G3DSA:1.20.1500.10 1 112 1.3E-41 T 26-04-2016 IPR023378 YheA/YmcA-like domain smi_0760 20f80aea076c4beb71dc1437e5af776e 112 Pfam PF06133 Control of competence regulator ComK, YlbF/YmcA 4 108 1.3E-21 T 26-04-2016 IPR010368 Control of competence regulator ComK, YlbF/YmcA smi_0760 20f80aea076c4beb71dc1437e5af776e 112 PANTHER PTHR41254 1 111 3.3E-44 T 26-04-2016 smi_0524 8b156c8fb16ccbf01849c53ac632b3fa 263 Gene3D G3DSA:3.40.50.150 15 262 5.6E-70 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase smi_0524 8b156c8fb16ccbf01849c53ac632b3fa 263 Pfam PF01555 DNA methylase 43 259 1.3E-57 T 26-04-2016 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 smi_0524 8b156c8fb16ccbf01849c53ac632b3fa 263 PANTHER PTHR13370:SF8 11 51 2.3E-42 T 26-04-2016 smi_0524 8b156c8fb16ccbf01849c53ac632b3fa 263 PANTHER PTHR13370:SF8 68 263 2.3E-42 T 26-04-2016 smi_0524 8b156c8fb16ccbf01849c53ac632b3fa 263 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 242 262 6.9E-42 T 26-04-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 smi_0524 8b156c8fb16ccbf01849c53ac632b3fa 263 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 41 55 6.9E-42 T 26-04-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 smi_0524 8b156c8fb16ccbf01849c53ac632b3fa 263 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 219 237 6.9E-42 T 26-04-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 smi_0524 8b156c8fb16ccbf01849c53ac632b3fa 263 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 200 217 6.9E-42 T 26-04-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 smi_0524 8b156c8fb16ccbf01849c53ac632b3fa 263 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 89 109 6.9E-42 T 26-04-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 smi_0524 8b156c8fb16ccbf01849c53ac632b3fa 263 PANTHER PTHR13370 11 51 2.3E-42 T 26-04-2016 smi_0524 8b156c8fb16ccbf01849c53ac632b3fa 263 PANTHER PTHR13370 68 263 2.3E-42 T 26-04-2016 smi_0524 8b156c8fb16ccbf01849c53ac632b3fa 263 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 45 51 - T 26-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 smi_0524 8b156c8fb16ccbf01849c53ac632b3fa 263 SUPERFAMILY SSF53335 17 262 2.45E-67 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase smi_0605 fb917cb94f42c0920e663f40bb75ff9d 279 PANTHER PTHR32243 3 279 1.7E-89 T 26-04-2016 smi_0605 fb917cb94f42c0920e663f40bb75ff9d 279 Gene3D G3DSA:1.10.3720.10 5 266 1.1E-63 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 smi_0605 fb917cb94f42c0920e663f40bb75ff9d 279 SUPERFAMILY SSF161098 12 279 1.03E-68 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 smi_0605 fb917cb94f42c0920e663f40bb75ff9d 279 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 95 270 5.4E-21 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 smi_1994 0f55bbe64fa2ea050ede1c7046877416 307 PANTHER PTHR32243 14 307 9.6E-111 T 26-04-2016 smi_1994 0f55bbe64fa2ea050ede1c7046877416 307 PANTHER PTHR32243:SF5 14 307 9.6E-111 T 26-04-2016 smi_1994 0f55bbe64fa2ea050ede1c7046877416 307 Gene3D G3DSA:1.10.3720.10 21 294 9.0E-47 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 smi_1994 0f55bbe64fa2ea050ede1c7046877416 307 SUPERFAMILY SSF161098 23 306 9.03E-54 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 smi_1994 0f55bbe64fa2ea050ede1c7046877416 307 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 123 301 2.4E-17 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 smi_0815 2206afd97660975f393a841543189541 311 PIRSF PIRSF000164 1 308 1.4E-64 T 26-04-2016 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 Reactome: REACT_1698 smi_0815 2206afd97660975f393a841543189541 311 Pfam PF01180 Dihydroorotate dehydrogenase 5 292 4.0E-79 T 26-04-2016 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 smi_0815 2206afd97660975f393a841543189541 311 Gene3D G3DSA:3.20.20.70 1 307 7.8E-80 T 26-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 smi_0815 2206afd97660975f393a841543189541 311 PANTHER PTHR11938 26 311 2.0E-186 T 26-04-2016 smi_0815 2206afd97660975f393a841543189541 311 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 40 59 - T 26-04-2016 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 smi_0815 2206afd97660975f393a841543189541 311 TIGRFAM TIGR01037 pyrD_sub1_fam: dihydroorotate dehydrogenase family protein 5 305 4.5E-53 T 26-04-2016 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 smi_0815 2206afd97660975f393a841543189541 311 SUPERFAMILY SSF51395 1 307 2.59E-69 T 26-04-2016 smi_0815 2206afd97660975f393a841543189541 311 PANTHER PTHR11938:SF106 26 311 2.0E-186 T 26-04-2016 smi_0815 2206afd97660975f393a841543189541 311 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 244 264 - T 26-04-2016 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 smi_0815 2206afd97660975f393a841543189541 311 Hamap MF_00224 Dihydroorotate dehydrogenase [pyrD]. 4 307 28.589 T 26-04-2016 IPR024920 Dihydroorotate dehydrogenase, class 1 GO:0004152|GO:0005737|GO:0006221 smi_1323 285b3dccca6d71244df57bfd16426cc7 467 SUPERFAMILY SSF52540 217 390 1.91E-23 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1323 285b3dccca6d71244df57bfd16426cc7 467 Pfam PF01580 FtsK/SpoIIIE family 220 305 6.5E-9 T 26-04-2016 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 smi_1323 285b3dccca6d71244df57bfd16426cc7 467 PANTHER PTHR22683:SF44 22 447 6.3E-211 T 26-04-2016 smi_1323 285b3dccca6d71244df57bfd16426cc7 467 PANTHER PTHR22683 22 447 6.3E-211 T 26-04-2016 smi_1323 285b3dccca6d71244df57bfd16426cc7 467 Gene3D G3DSA:3.40.50.300 204 388 8.3E-20 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1247 b2ce01d8715db5f8dc54159ee8e0328c 1025 Gene3D G3DSA:3.40.50.300 368 386 2.6E-10 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1247 b2ce01d8715db5f8dc54159ee8e0328c 1025 Gene3D G3DSA:3.40.50.300 95 154 2.6E-10 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1247 b2ce01d8715db5f8dc54159ee8e0328c 1025 SUPERFAMILY SSF52540 95 133 7.08E-7 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1247 b2ce01d8715db5f8dc54159ee8e0328c 1025 SUPERFAMILY SSF52540 495 577 7.08E-7 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1247 b2ce01d8715db5f8dc54159ee8e0328c 1025 SUPERFAMILY SSF52540 74 268 2.89E-13 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1247 b2ce01d8715db5f8dc54159ee8e0328c 1025 Pfam PF04851 Type III restriction enzyme, res subunit 85 256 8.8E-14 T 26-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 smi_1087 9983c7cf761b7975e6870439e55fa455 297 Gene3D G3DSA:3.30.420.10 117 267 6.4E-6 T 26-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 smi_1087 9983c7cf761b7975e6870439e55fa455 297 Pfam PF13936 Helix-turn-helix domain 4 47 9.5E-17 T 26-04-2016 IPR025246 Transposase IS30-like HTH domain smi_1087 9983c7cf761b7975e6870439e55fa455 297 SUPERFAMILY SSF53098 117 267 2.12E-9 T 26-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 smi_0989 a4d31f4b728e7e31e9d56368126029c7 288 PANTHER PTHR32196:SF27 2 282 1.4E-77 T 26-04-2016 smi_0989 a4d31f4b728e7e31e9d56368126029c7 288 PANTHER PTHR32196 2 282 1.4E-77 T 26-04-2016 smi_0989 a4d31f4b728e7e31e9d56368126029c7 288 Pfam PF02653 Branched-chain amino acid transport system / permease component 2 269 9.2E-31 T 26-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 smi_1822 6c022364f3d128d6520dd9845883bf02 416 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 42 55 - T 26-04-2016 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 smi_1822 6c022364f3d128d6520dd9845883bf02 416 SUPERFAMILY SSF55021 333 411 5.95E-11 T 26-04-2016 smi_1822 6c022364f3d128d6520dd9845883bf02 416 PANTHER PTHR10314 1 362 1.1E-161 T 26-04-2016 smi_1822 6c022364f3d128d6520dd9845883bf02 416 Gene3D G3DSA:3.40.50.1100 50 137 1.2E-31 T 26-04-2016 smi_1822 6c022364f3d128d6520dd9845883bf02 416 PANTHER PTHR10314:SF30 1 362 1.1E-161 T 26-04-2016 smi_1822 6c022364f3d128d6520dd9845883bf02 416 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 17 310 6.4E-76 T 26-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme smi_1822 6c022364f3d128d6520dd9845883bf02 416 TIGRFAM TIGR02079 THD1: threonine dehydratase 5 416 2.6E-181 T 26-04-2016 IPR011820 L-threonine dehydratase biosynthetic IlvA GO:0004794 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19|UniPathway: UPA00047 smi_1822 6c022364f3d128d6520dd9845883bf02 416 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 323 415 3.9E-25 T 26-04-2016 IPR001721 ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19|UniPathway: UPA00047 smi_1822 6c022364f3d128d6520dd9845883bf02 416 SUPERFAMILY SSF53686 5 360 6.81E-97 T 26-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme smi_1822 6c022364f3d128d6520dd9845883bf02 416 Gene3D G3DSA:3.40.50.1100 138 326 3.1E-47 T 26-04-2016 smi_0375 785c28ed78dd693091f1c748d7698bcf 159 SUPERFAMILY SSF75420 4 87 3.66E-24 T 26-04-2016 IPR028989 Ribosome maturation factor RimP, N-terminal smi_0375 785c28ed78dd693091f1c748d7698bcf 159 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 9 159 21.209 T 26-04-2016 IPR003728 Ribosome maturation factor RimP GO:0042274 smi_0375 785c28ed78dd693091f1c748d7698bcf 159 PANTHER PTHR33867:SF1 3 158 9.7E-45 T 26-04-2016 smi_0375 785c28ed78dd693091f1c748d7698bcf 159 Gene3D G3DSA:3.30.300.70 5 84 1.9E-25 T 26-04-2016 IPR028989 Ribosome maturation factor RimP, N-terminal smi_0375 785c28ed78dd693091f1c748d7698bcf 159 Gene3D G3DSA:2.30.30.180 91 157 1.2E-30 T 26-04-2016 IPR028998 Ribosome maturation factor RimP, C-terminal smi_0375 785c28ed78dd693091f1c748d7698bcf 159 PANTHER PTHR33867 3 158 9.7E-45 T 26-04-2016 smi_0375 785c28ed78dd693091f1c748d7698bcf 159 SUPERFAMILY SSF74942 88 158 3.79E-19 T 26-04-2016 IPR028998 Ribosome maturation factor RimP, C-terminal smi_0375 785c28ed78dd693091f1c748d7698bcf 159 Pfam PF02576 Putative ribosome maturation factor RimP 15 155 8.7E-36 T 26-04-2016 IPR003728 Ribosome maturation factor RimP GO:0042274 smi_0362 11e55bcdc353818290f6459f29bf6855 349 Pfam PF05975 Bacterial ABC transporter protein EcsB 132 330 2.9E-42 T 26-04-2016 IPR010288 Bacterial ABC transporter EcsB GO:0016021 smi_0362 11e55bcdc353818290f6459f29bf6855 349 Pfam PF05975 Bacterial ABC transporter protein EcsB 2 153 3.1E-30 T 26-04-2016 IPR010288 Bacterial ABC transporter EcsB GO:0016021 smi_0362 11e55bcdc353818290f6459f29bf6855 349 PANTHER PTHR41253 1 348 2.8E-32 T 26-04-2016 smi_1993 2cf4e457e24d2ebffeac8b40b9088dfa 493 Gene3D G3DSA:3.40.190.10 72 157 2.8E-16 T 26-04-2016 smi_1993 2cf4e457e24d2ebffeac8b40b9088dfa 493 Pfam PF12010 Domain of unknown function (DUF3502) 356 489 1.2E-34 T 26-04-2016 IPR022627 Domain of unknown function DUF3502 smi_1993 2cf4e457e24d2ebffeac8b40b9088dfa 493 SUPERFAMILY SSF53850 23 487 4.39E-81 T 26-04-2016 smi_1993 2cf4e457e24d2ebffeac8b40b9088dfa 493 PANTHER PTHR30061 1 348 4.6E-19 T 26-04-2016 smi_1993 2cf4e457e24d2ebffeac8b40b9088dfa 493 Gene3D G3DSA:3.40.190.10 434 487 6.0E-28 T 26-04-2016 smi_1993 2cf4e457e24d2ebffeac8b40b9088dfa 493 Gene3D G3DSA:3.40.190.10 164 355 6.0E-28 T 26-04-2016 smi_0318 d22ec74a6b383ff8ecff6191be6ff42e 64 Pfam PF11772 DNA-directed RNA polymerase subunit beta 17 63 6.1E-19 T 26-04-2016 IPR024596 DNA-directed RNA polymerase subunit beta/EpuA smi_0318 d22ec74a6b383ff8ecff6191be6ff42e 64 ProDom PD053619 EPUA PRECURSOR SIGNAL PEPTIDE YFDG EXTRACELLULAR OB2955 BH3736 GBS0884 SMU.1524C 9 61 5.0E-11 T 26-04-2016 IPR024596 DNA-directed RNA polymerase subunit beta/EpuA smi_0277 1e045423dd3f27f9ee5a585704454024 472 PIRSF PIRSF005353 1 472 5.7E-159 T 26-04-2016 IPR026033 Purine permease PbuG-like smi_0277 1e045423dd3f27f9ee5a585704454024 472 PANTHER PTHR11119:SF9 1 171 1.2E-135 T 26-04-2016 IPR029940 AzgA purine transporter GO:0005345|GO:0006863 smi_0277 1e045423dd3f27f9ee5a585704454024 472 PANTHER PTHR11119:SF9 193 459 1.2E-135 T 26-04-2016 IPR029940 AzgA purine transporter GO:0005345|GO:0006863 smi_0277 1e045423dd3f27f9ee5a585704454024 472 PANTHER PTHR11119 1 171 1.2E-135 T 26-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 smi_0277 1e045423dd3f27f9ee5a585704454024 472 PANTHER PTHR11119 193 459 1.2E-135 T 26-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 smi_0277 1e045423dd3f27f9ee5a585704454024 472 Pfam PF00860 Permease family 17 159 1.7E-15 T 26-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 smi_0277 1e045423dd3f27f9ee5a585704454024 472 Pfam PF00860 Permease family 175 432 2.0E-25 T 26-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 smi_1012 c536cc6b2937e82f5fd1d1aee0c5d708 292 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 178 222 4.5E-11 T 26-04-2016 IPR032819 tRNA pseudouridylate synthase B, C-terminal smi_1012 c536cc6b2937e82f5fd1d1aee0c5d708 292 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 1 291 19.017 T 26-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 smi_1012 c536cc6b2937e82f5fd1d1aee0c5d708 292 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 23 177 1.4E-55 T 26-04-2016 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 smi_1012 c536cc6b2937e82f5fd1d1aee0c5d708 292 PANTHER PTHR13767:SF2 1 291 8.0E-118 T 26-04-2016 smi_1012 c536cc6b2937e82f5fd1d1aee0c5d708 292 SUPERFAMILY SSF55120 1 230 6.62E-78 T 26-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 smi_1012 c536cc6b2937e82f5fd1d1aee0c5d708 292 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 1 215 2.9E-76 T 26-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 smi_1012 c536cc6b2937e82f5fd1d1aee0c5d708 292 PANTHER PTHR13767 1 291 8.0E-118 T 26-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 smi_0282 5b1e80db3231cd5372ea18a0ca2a1c90 270 TIGRFAM TIGR00525 folB: dihydroneopterin aldolase 2 117 4.2E-42 T 26-04-2016 IPR006156 Dihydroneopterin aldolase GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 smi_0282 5b1e80db3231cd5372ea18a0ca2a1c90 270 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 122 250 6.5E-43 T 26-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 smi_0282 5b1e80db3231cd5372ea18a0ca2a1c90 270 SUPERFAMILY SSF55083 121 268 2.35E-48 T 26-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 smi_0282 5b1e80db3231cd5372ea18a0ca2a1c90 270 TIGRFAM TIGR00526 folB_dom: FolB domain 1 121 1.6E-40 T 26-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 smi_0282 5b1e80db3231cd5372ea18a0ca2a1c90 270 PANTHER PTHR20941 96 270 2.0E-83 T 26-04-2016 smi_0282 5b1e80db3231cd5372ea18a0ca2a1c90 270 Gene3D G3DSA:3.30.1130.10 1 119 8.6E-34 T 26-04-2016 smi_0282 5b1e80db3231cd5372ea18a0ca2a1c90 270 PANTHER PTHR20941:SF10 96 270 2.0E-83 T 26-04-2016 smi_0282 5b1e80db3231cd5372ea18a0ca2a1c90 270 SUPERFAMILY SSF55620 2 119 1.41E-27 T 26-04-2016 smi_0282 5b1e80db3231cd5372ea18a0ca2a1c90 270 Pfam PF02152 Dihydroneopterin aldolase 5 116 1.7E-26 T 26-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 smi_0282 5b1e80db3231cd5372ea18a0ca2a1c90 270 SMART SM00905 4 117 2.5E-34 T 26-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 smi_0282 5b1e80db3231cd5372ea18a0ca2a1c90 270 Gene3D G3DSA:3.30.70.560 121 269 6.8E-52 T 26-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 smi_0282 5b1e80db3231cd5372ea18a0ca2a1c90 270 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 205 216 - T 26-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 smi_0282 5b1e80db3231cd5372ea18a0ca2a1c90 270 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 123 250 1.1E-33 T 26-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 smi_0278 4ced3f5b334cd6c300db1ef26888df4d 236 PANTHER PTHR36435 1 236 1.6E-41 T 26-04-2016 smi_0278 4ced3f5b334cd6c300db1ef26888df4d 236 Pfam PF02517 CAAX protease self-immunity 129 216 2.7E-15 T 26-04-2016 IPR003675 CAAX amino terminal protease GO:0016020 smi_0278 4ced3f5b334cd6c300db1ef26888df4d 236 PANTHER PTHR36435:SF1 1 236 1.6E-41 T 26-04-2016 smi_1739 7080f87de905bf59c4940ba429b89e0e 427 Pfam PF05697 Bacterial trigger factor protein (TF) 1 145 2.6E-40 T 26-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 smi_1739 7080f87de905bf59c4940ba429b89e0e 427 SUPERFAMILY SSF54534 89 243 5.3E-36 T 26-04-2016 smi_1739 7080f87de905bf59c4940ba429b89e0e 427 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 159 232 3.5E-15 T 26-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 smi_1739 7080f87de905bf59c4940ba429b89e0e 427 SUPERFAMILY SSF102735 1 128 2.62E-35 T 26-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 smi_1739 7080f87de905bf59c4940ba429b89e0e 427 Hamap MF_00303 Trigger factor [tig]. 1 427 22.54 T 26-04-2016 IPR005215 Trigger factor GO:0015031 smi_1739 7080f87de905bf59c4940ba429b89e0e 427 PANTHER PTHR30560:SF3 1 427 8.7E-126 T 26-04-2016 smi_1739 7080f87de905bf59c4940ba429b89e0e 427 TIGRFAM TIGR00115 tig: trigger factor 13 420 6.0E-128 T 26-04-2016 IPR005215 Trigger factor GO:0015031 smi_1739 7080f87de905bf59c4940ba429b89e0e 427 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 264 421 3.8E-45 T 26-04-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 smi_1739 7080f87de905bf59c4940ba429b89e0e 427 SUPERFAMILY SSF109998 250 427 2.49E-37 T 26-04-2016 IPR027304 Trigger factor/SurA domain smi_1739 7080f87de905bf59c4940ba429b89e0e 427 Gene3D G3DSA:3.10.50.40 158 217 2.8E-11 T 26-04-2016 smi_1739 7080f87de905bf59c4940ba429b89e0e 427 PIRSF PIRSF003095 1 427 2.5E-124 T 26-04-2016 IPR005215 Trigger factor GO:0015031 smi_1739 7080f87de905bf59c4940ba429b89e0e 427 Gene3D G3DSA:3.30.70.1050 1 119 3.7E-36 T 26-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 smi_1739 7080f87de905bf59c4940ba429b89e0e 427 Gene3D G3DSA:1.10.3120.10 218 400 6.1E-57 T 26-04-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 smi_1739 7080f87de905bf59c4940ba429b89e0e 427 PANTHER PTHR30560 1 427 8.7E-126 T 26-04-2016 smi_1389 2a89de0e2a7b1c77a751c37f0cb9e99f 291 Gene3D G3DSA:3.20.20.70 23 159 7.2E-52 T 26-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 smi_1389 2a89de0e2a7b1c77a751c37f0cb9e99f 291 Gene3D G3DSA:3.20.20.70 191 279 7.2E-52 T 26-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 smi_1389 2a89de0e2a7b1c77a751c37f0cb9e99f 291 TIGRFAM TIGR00343 TIGR00343: pyridoxal 5'-phosphate synthase, synthase subunit Pdx1 8 285 2.9E-156 T 26-04-2016 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466|UniPathway: UPA00245 smi_1389 2a89de0e2a7b1c77a751c37f0cb9e99f 291 PANTHER PTHR31829 3 291 8.2E-216 T 26-04-2016 smi_1389 2a89de0e2a7b1c77a751c37f0cb9e99f 291 PIRSF PIRSF029271 1 291 5.7E-146 T 26-04-2016 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466|UniPathway: UPA00245 smi_1389 2a89de0e2a7b1c77a751c37f0cb9e99f 291 SUPERFAMILY SSF51366 17 267 1.69E-65 T 26-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 smi_1389 2a89de0e2a7b1c77a751c37f0cb9e99f 291 Pfam PF01680 SOR/SNZ family 7 211 1.4E-108 T 26-04-2016 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466|UniPathway: UPA00245 smi_1389 2a89de0e2a7b1c77a751c37f0cb9e99f 291 ProSitePatterns PS01235 PdxS/SNZ family signature. 204 222 - T 26-04-2016 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466|UniPathway: UPA00245 smi_1389 2a89de0e2a7b1c77a751c37f0cb9e99f 291 Hamap MF_01824 Pyridoxal 5'-phosphate synthase subunit PdxS [pdxS]. 3 291 50.148 T 26-04-2016 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466|UniPathway: UPA00245 smi_0728 89588ff3d7ebe6f3e50d43bc906c7851 133 Hamap MF_01132 Regulatory protein Spx [spxA]. 1 131 36.38 T 26-04-2016 IPR023731 Regulatory protein Spx GO:0045892 smi_0728 89588ff3d7ebe6f3e50d43bc906c7851 133 Pfam PF03960 ArsC family 18 113 4.2E-23 T 26-04-2016 IPR006660 Arsenate reductase-like smi_0728 89588ff3d7ebe6f3e50d43bc906c7851 133 SUPERFAMILY SSF52833 1 126 2.89E-39 T 26-04-2016 IPR012336 Thioredoxin-like fold smi_0728 89588ff3d7ebe6f3e50d43bc906c7851 133 PANTHER PTHR30041 1 133 1.5E-78 T 26-04-2016 smi_0728 89588ff3d7ebe6f3e50d43bc906c7851 133 PANTHER PTHR30041:SF5 1 133 1.5E-78 T 26-04-2016 smi_0728 89588ff3d7ebe6f3e50d43bc906c7851 133 Gene3D G3DSA:3.40.30.10 1 126 3.5E-38 T 26-04-2016 IPR012336 Thioredoxin-like fold smi_0728 89588ff3d7ebe6f3e50d43bc906c7851 133 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 2 114 1.2E-35 T 26-04-2016 IPR006504 Transcriptional regulator Spx/MgsR smi_0720 217de340a44d1ce9c7e548e84fc0ac2a 376 PANTHER PTHR13932:SF5 1 376 5.2E-160 T 26-04-2016 smi_0720 217de340a44d1ce9c7e548e84fc0ac2a 376 Gene3D G3DSA:3.80.30.20 5 237 3.7E-40 T 26-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe smi_0720 217de340a44d1ce9c7e548e84fc0ac2a 376 SUPERFAMILY SSF102114 3 374 4.32E-117 T 26-04-2016 smi_0720 217de340a44d1ce9c7e548e84fc0ac2a 376 Pfam PF04055 Radical SAM superfamily 10 173 1.3E-22 T 26-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 smi_0720 217de340a44d1ce9c7e548e84fc0ac2a 376 PANTHER PTHR13932 1 376 5.2E-160 T 26-04-2016 smi_0720 217de340a44d1ce9c7e548e84fc0ac2a 376 Pfam PF06969 HemN C-terminal domain 299 364 1.5E-20 T 26-04-2016 IPR010723 HemN, C-terminal smi_0720 217de340a44d1ce9c7e548e84fc0ac2a 376 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 7 352 7.5E-115 T 26-04-2016 IPR004559 Coproporphyrinogen III oxidase, oxygen-independent related GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00071+1.3.99.-|KEGG: 00280+1.3.99.-|KEGG: 00281+1.3.99.-|KEGG: 00362+1.3.99.-|KEGG: 00626+1.3.99.-|KEGG: 00930+1.3.99.- smi_0720 217de340a44d1ce9c7e548e84fc0ac2a 376 SMART SM00729 5 221 3.7E-58 T 26-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 smi_0466 57a63c13d5aa115a6d1f7672acc88aee 132 SUPERFAMILY SSF160719 35 118 3.4E-6 T 26-04-2016 smi_0466 57a63c13d5aa115a6d1f7672acc88aee 132 Pfam PF10934 Protein of unknown function (DUF2634) 25 117 2.8E-22 T 26-04-2016 IPR020288 Protein of unknown function DUF2634 smi_0466 57a63c13d5aa115a6d1f7672acc88aee 132 ProDom PD033094 XKDS PHAGE-LIKE PBSX ELEMENT PHAGE LIN1286 RELATED YQBS 35 130 1.0E-17 T 26-04-2016 IPR020288 Protein of unknown function DUF2634 smi_1424 347065aac5fc8541fad376c25c657b89 173 SUPERFAMILY SSF160379 2 172 8.11E-43 T 26-04-2016 smi_1424 347065aac5fc8541fad376c25c657b89 173 PIRSF PIRSF008502 2 173 1.9E-32 T 26-04-2016 IPR012545 Protein of unknown function DUF1697 smi_1424 347065aac5fc8541fad376c25c657b89 173 Pfam PF08002 Protein of unknown function (DUF1697) 3 134 3.0E-29 T 26-04-2016 IPR012545 Protein of unknown function DUF1697 smi_1424 347065aac5fc8541fad376c25c657b89 173 PANTHER PTHR36439:SF1 1 171 3.2E-28 T 26-04-2016 smi_1424 347065aac5fc8541fad376c25c657b89 173 Gene3D G3DSA:3.30.70.1280 3 87 1.2E-25 T 26-04-2016 smi_1424 347065aac5fc8541fad376c25c657b89 173 PANTHER PTHR36439 1 171 3.2E-28 T 26-04-2016 smi_1617 1e9a077f42fac069d950a9f111319c69 321 SUPERFAMILY SSF47413 3 57 2.3E-17 T 26-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 smi_1617 1e9a077f42fac069d950a9f111319c69 321 Gene3D G3DSA:1.10.260.40 4 54 1.1E-25 T 26-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 smi_1617 1e9a077f42fac069d950a9f111319c69 321 PANTHER PTHR30146 2 315 5.6E-105 T 26-04-2016 smi_1617 1e9a077f42fac069d950a9f111319c69 321 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 4 14 3.4E-5 T 26-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 smi_1617 1e9a077f42fac069d950a9f111319c69 321 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 14 24 3.4E-5 T 26-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 smi_1617 1e9a077f42fac069d950a9f111319c69 321 PANTHER PTHR30146:SF31 2 315 5.6E-105 T 26-04-2016 smi_1617 1e9a077f42fac069d950a9f111319c69 321 SMART SM00354 2 72 1.4E-38 T 26-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 smi_1617 1e9a077f42fac069d950a9f111319c69 321 Gene3D G3DSA:3.40.50.2300 55 171 5.1E-42 T 26-04-2016 smi_1617 1e9a077f42fac069d950a9f111319c69 321 Pfam PF00356 Bacterial regulatory proteins, lacI family 5 49 2.2E-20 T 26-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 smi_1617 1e9a077f42fac069d950a9f111319c69 321 Gene3D G3DSA:3.40.50.2300 172 300 1.0E-30 T 26-04-2016 smi_1617 1e9a077f42fac069d950a9f111319c69 321 ProSitePatterns PS00356 LacI-type HTH domain signature. 5 23 - T 26-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 smi_1617 1e9a077f42fac069d950a9f111319c69 321 Pfam PF13377 Periplasmic binding protein-like domain 166 320 2.9E-24 T 26-04-2016 smi_1617 1e9a077f42fac069d950a9f111319c69 321 SUPERFAMILY SSF53822 61 315 4.89E-66 T 26-04-2016 IPR028082 Periplasmic binding protein-like I smi_1288 d3e43cdf635f76c532dbec3e4db69ea0 230 Gene3D G3DSA:3.40.50.1580 1 229 2.5E-75 T 26-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 smi_1288 d3e43cdf635f76c532dbec3e4db69ea0 230 Pfam PF01048 Phosphorylase superfamily 2 227 2.0E-49 T 26-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 smi_1288 d3e43cdf635f76c532dbec3e4db69ea0 230 SUPERFAMILY SSF53167 1 229 6.55E-73 T 26-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 smi_1288 d3e43cdf635f76c532dbec3e4db69ea0 230 TIGRFAM TIGR01704 MTA/SAH-Nsdase: MTA/SAH nucleosidase 2 227 5.4E-66 T 26-04-2016 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154|UniPathway: UPA00904 smi_1288 d3e43cdf635f76c532dbec3e4db69ea0 230 PANTHER PTHR21234 1 230 1.8E-57 T 26-04-2016 IPR018017 Nucleoside phosphorylase smi_1288 d3e43cdf635f76c532dbec3e4db69ea0 230 PANTHER PTHR21234:SF16 1 230 1.8E-57 T 26-04-2016 smi_1399 305395752edb51b21ddcd0ec9d093891 463 Pfam PF01522 Polysaccharide deacetylase 264 377 2.5E-34 T 26-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 smi_1399 305395752edb51b21ddcd0ec9d093891 463 Gene3D G3DSA:3.20.20.370 258 450 3.4E-72 T 26-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 smi_1399 305395752edb51b21ddcd0ec9d093891 463 PANTHER PTHR10587 268 449 4.0E-63 T 26-04-2016 smi_1399 305395752edb51b21ddcd0ec9d093891 463 SUPERFAMILY SSF144015 46 266 1.7E-67 T 26-04-2016 smi_1399 305395752edb51b21ddcd0ec9d093891 463 PIRSF PIRSF037479 8 463 5.5E-159 T 26-04-2016 IPR017219 Peptidoglycan GlcNAc deacetylase smi_1399 305395752edb51b21ddcd0ec9d093891 463 SUPERFAMILY SSF88713 260 449 1.58E-65 T 26-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 smi_1216 d10c3ec2f87a687cc98016fada8f68b7 89 PANTHER PTHR41336 1 89 1.4E-29 T 26-04-2016 smi_1216 d10c3ec2f87a687cc98016fada8f68b7 89 Pfam PF06961 Protein of unknown function (DUF1294) 15 69 1.4E-23 T 26-04-2016 IPR010718 Protein of unknown function DUF1294 smi_1216 d10c3ec2f87a687cc98016fada8f68b7 89 PIRSF PIRSF002599 3 89 2.3E-9 T 26-04-2016 IPR012156 Cold shock, CspA GO:0003676 smi_1216 d10c3ec2f87a687cc98016fada8f68b7 89 PANTHER PTHR41336:SF1 1 89 1.4E-29 T 26-04-2016 smi_1158 a8db236376e23c65ef9448ab6af76134 388 SUPERFAMILY SSF53098 207 358 3.03E-9 T 26-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 smi_1158 a8db236376e23c65ef9448ab6af76134 388 Gene3D G3DSA:3.30.420.10 209 358 1.2E-5 T 26-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 smi_1158 a8db236376e23c65ef9448ab6af76134 388 Pfam PF13936 Helix-turn-helix domain 4 47 1.4E-16 T 26-04-2016 IPR025246 Transposase IS30-like HTH domain smi_1158 a8db236376e23c65ef9448ab6af76134 388 PANTHER PTHR10948 1 372 1.7E-16 T 26-04-2016 smi_0555 ae120981da243cdf9d919a928a3ab7b8 492 Pfam PF08270 M protein trans-acting positive regulator (MGA) PRD domain 175 392 5.0E-77 T 26-04-2016 IPR013236 M protein trans-acting positive regulator (MGA), PRD domain smi_0555 ae120981da243cdf9d919a928a3ab7b8 492 Pfam PF08280 M protein trans-acting positive regulator (MGA) HTH domain 6 64 1.1E-19 T 26-04-2016 IPR013199 M protein trans-acting positive regulator (MGA) HTH domain smi_0555 ae120981da243cdf9d919a928a3ab7b8 492 PANTHER PTHR42275 1 492 4.7E-235 T 26-04-2016 smi_0555 ae120981da243cdf9d919a928a3ab7b8 492 Pfam PF05043 Mga helix-turn-helix domain 73 158 4.3E-27 T 26-04-2016 IPR007737 Mga helix-turn-helix domain smi_0555 ae120981da243cdf9d919a928a3ab7b8 492 Gene3D G3DSA:1.10.10.10 7 51 3.7E-7 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain smi_0555 ae120981da243cdf9d919a928a3ab7b8 492 PANTHER PTHR42275:SF1 1 492 4.7E-235 T 26-04-2016 smi_0088 4b8d52a60f7ddb906e0a4576cfb336e8 459 PANTHER PTHR32024:SF1 8 459 5.1E-149 T 26-04-2016 smi_0088 4b8d52a60f7ddb906e0a4576cfb336e8 459 PANTHER PTHR32024 8 459 5.1E-149 T 26-04-2016 smi_0088 4b8d52a60f7ddb906e0a4576cfb336e8 459 Pfam PF02386 Cation transport protein 46 440 3.3E-60 T 26-04-2016 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 smi_1260 e4ff1df3e23b2aa4c1d916af9d84e510 103 SUPERFAMILY SSF56349 16 99 1.15E-12 T 26-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 smi_1260 e4ff1df3e23b2aa4c1d916af9d84e510 103 Gene3D G3DSA:1.10.443.10 11 101 4.0E-12 T 26-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 smi_1260 e4ff1df3e23b2aa4c1d916af9d84e510 103 Pfam PF00589 Phage integrase family 14 100 3.8E-7 T 26-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 smi_0823.1 91ed7b83e10eedf2b7984d05ccecd552 74 Pfam PF01381 Helix-turn-helix 11 65 7.2E-16 T 26-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 smi_0823.1 91ed7b83e10eedf2b7984d05ccecd552 74 PANTHER PTHR10245:SF61 11 72 5.4E-17 T 26-04-2016 smi_0823.1 91ed7b83e10eedf2b7984d05ccecd552 74 Gene3D G3DSA:1.10.260.40 7 68 2.2E-24 T 26-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 smi_0823.1 91ed7b83e10eedf2b7984d05ccecd552 74 SUPERFAMILY SSF47413 6 70 1.34E-18 T 26-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 smi_0823.1 91ed7b83e10eedf2b7984d05ccecd552 74 SMART SM00530 10 65 6.4E-16 T 26-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 smi_0823.1 91ed7b83e10eedf2b7984d05ccecd552 74 PANTHER PTHR10245 11 72 5.4E-17 T 26-04-2016 smi_1636 0abcb9af46c2f63e97199c16ad5f4bb7 197 SMART SM00471 22 149 3.7E-6 T 26-04-2016 IPR003607 HD/PDEase domain smi_1636 0abcb9af46c2f63e97199c16ad5f4bb7 197 TIGRFAM TIGR00488 TIGR00488: putative HD superfamily hydrolase 20 188 4.3E-45 T 26-04-2016 IPR005249 Conserved hypothetical protein CHP00488 smi_1636 0abcb9af46c2f63e97199c16ad5f4bb7 197 TIGRFAM TIGR00277 HDIG: HDIG domain 25 95 4.6E-7 T 26-04-2016 IPR006675 HDIG domain smi_1636 0abcb9af46c2f63e97199c16ad5f4bb7 197 SUPERFAMILY SSF109604 2 190 7.25E-32 T 26-04-2016 smi_1636 0abcb9af46c2f63e97199c16ad5f4bb7 197 Gene3D G3DSA:1.10.3210.10 3 193 2.0E-66 T 26-04-2016 IPR006674 HD domain smi_1636 0abcb9af46c2f63e97199c16ad5f4bb7 197 Pfam PF01966 HD domain 26 138 7.1E-13 T 26-04-2016 IPR006674 HD domain smi_1636 0abcb9af46c2f63e97199c16ad5f4bb7 197 PANTHER PTHR35795 3 197 7.2E-69 T 26-04-2016 smi_2029 406ef9a5edcf22cb315c27456d43bee1 79 TIGRFAM TIGR01688 dltC: D-alanine--poly(phosphoribitol) ligase, subunit 2 4 73 3.6E-23 T 26-04-2016 IPR003230 D-alanine--poly(phosphoribitol) ligase subunit 2 GO:0019350|GO:0036370 KEGG: 00473+6.1.1.13|UniPathway: UPA00556 smi_2029 406ef9a5edcf22cb315c27456d43bee1 79 Gene3D G3DSA:1.10.1200.10 1 76 5.5E-24 T 26-04-2016 IPR009081 Phosphopantetheine binding ACP domain smi_2029 406ef9a5edcf22cb315c27456d43bee1 79 Hamap MF_00565 D-alanine--poly(phosphoribitol) ligase subunit 2 [dltC]. 1 77 50.679 T 26-04-2016 IPR003230 D-alanine--poly(phosphoribitol) ligase subunit 2 GO:0019350|GO:0036370 KEGG: 00473+6.1.1.13|UniPathway: UPA00556 smi_2029 406ef9a5edcf22cb315c27456d43bee1 79 PANTHER PTHR41270 2 77 1.7E-36 T 26-04-2016 smi_2029 406ef9a5edcf22cb315c27456d43bee1 79 SUPERFAMILY SSF47336 4 78 3.01E-14 T 26-04-2016 IPR009081 Phosphopantetheine binding ACP domain smi_2029 406ef9a5edcf22cb315c27456d43bee1 79 Pfam PF00550 Phosphopantetheine attachment site 6 71 1.1E-10 T 26-04-2016 IPR009081 Phosphopantetheine binding ACP domain smi_2029 406ef9a5edcf22cb315c27456d43bee1 79 PANTHER PTHR41270:SF1 2 77 1.7E-36 T 26-04-2016 smi_0691 545c3a6bd648981a2c6479e131c8ed1f 210 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 26-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 smi_0691 545c3a6bd648981a2c6479e131c8ed1f 210 Gene3D G3DSA:3.40.50.300 2 209 2.0E-57 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0691 545c3a6bd648981a2c6479e131c8ed1f 210 PANTHER PTHR24220 5 210 1.1E-126 T 26-04-2016 smi_0691 545c3a6bd648981a2c6479e131c8ed1f 210 PANTHER PTHR24220:SF587 5 210 1.1E-126 T 26-04-2016 smi_0691 545c3a6bd648981a2c6479e131c8ed1f 210 SMART SM00382 30 206 7.3E-12 T 26-04-2016 IPR003593 AAA+ ATPase domain smi_0691 545c3a6bd648981a2c6479e131c8ed1f 210 Pfam PF00005 ABC transporter 23 157 1.7E-30 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 smi_0691 545c3a6bd648981a2c6479e131c8ed1f 210 SUPERFAMILY SSF52540 3 209 4.05E-54 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0153 a1079f11bf32eb671c44b502469babf9 568 SMART SM00382 353 539 4.8E-12 T 26-04-2016 IPR003593 AAA+ ATPase domain smi_0153 a1079f11bf32eb671c44b502469babf9 568 Pfam PF00664 ABC transporter transmembrane region 18 281 2.5E-36 T 26-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 smi_0153 a1079f11bf32eb671c44b502469babf9 568 Gene3D G3DSA:3.40.50.300 327 557 1.2E-70 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0153 a1079f11bf32eb671c44b502469babf9 568 Pfam PF00005 ABC transporter 344 493 4.7E-30 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 smi_0153 a1079f11bf32eb671c44b502469babf9 568 SUPERFAMILY SSF52540 323 563 5.1E-81 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0153 a1079f11bf32eb671c44b502469babf9 568 SUPERFAMILY SSF90123 3 311 1.22E-59 T 26-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 smi_0153 a1079f11bf32eb671c44b502469babf9 568 PANTHER PTHR24221 2 568 3.2E-172 T 26-04-2016 smi_0153 a1079f11bf32eb671c44b502469babf9 568 ProSitePatterns PS00211 ABC transporters family signature. 465 479 - T 26-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 smi_0153 a1079f11bf32eb671c44b502469babf9 568 Gene3D G3DSA:1.20.1560.10 4 311 2.2E-53 T 26-04-2016 smi_1324 93695f48c8bd5713c09f2e1724a78995 394 SUPERFAMILY SSF47413 5 59 3.38E-9 T 26-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 smi_1324 93695f48c8bd5713c09f2e1724a78995 394 SMART SM00530 10 65 1.2E-8 T 26-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 smi_1324 93695f48c8bd5713c09f2e1724a78995 394 Gene3D G3DSA:1.10.260.40 9 59 7.3E-9 T 26-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 smi_1324 93695f48c8bd5713c09f2e1724a78995 394 Pfam PF01381 Helix-turn-helix 11 58 3.2E-8 T 26-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 smi_1324 93695f48c8bd5713c09f2e1724a78995 394 Pfam PF02486 Replication initiation factor 165 369 4.4E-67 T 26-04-2016 IPR003491 Replication initiation factor GO:0003677|GO:0003916|GO:0006270 smi_0857 28fb6e1cb147b3123fcdcd63d03d0e19 184 PANTHER PTHR11019 1 184 3.0E-68 T 26-04-2016 smi_0857 28fb6e1cb147b3123fcdcd63d03d0e19 184 SUPERFAMILY SSF52317 1 167 1.09E-46 T 26-04-2016 IPR029062 Class I glutamine amidotransferase-like smi_0857 28fb6e1cb147b3123fcdcd63d03d0e19 184 PANTHER PTHR11019:SF4 1 184 3.0E-68 T 26-04-2016 smi_0857 28fb6e1cb147b3123fcdcd63d03d0e19 184 TIGRFAM TIGR01383 not_thiJ: DJ-1 family protein 3 167 3.5E-62 T 26-04-2016 IPR006287 DJ-1 smi_0857 28fb6e1cb147b3123fcdcd63d03d0e19 184 Gene3D G3DSA:3.40.50.880 1 164 1.7E-55 T 26-04-2016 IPR029062 Class I glutamine amidotransferase-like smi_0857 28fb6e1cb147b3123fcdcd63d03d0e19 184 Pfam PF01965 DJ-1/PfpI family 3 162 1.3E-41 T 26-04-2016 IPR002818 DJ-1/PfpI smi_1364 2422ff44e832888db2c49fe799b2fa41 172 PANTHER PTHR33795 1 168 2.5E-67 T 26-04-2016 smi_1364 2422ff44e832888db2c49fe799b2fa41 172 PANTHER PTHR33795:SF1 1 168 2.5E-67 T 26-04-2016 smi_1364 2422ff44e832888db2c49fe799b2fa41 172 Gene3D G3DSA:1.10.10.60 60 151 1.6E-13 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 smi_1364 2422ff44e832888db2c49fe799b2fa41 172 SUPERFAMILY SSF46689 54 157 1.76E-16 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 smi_0604 cb377ddb1e2d7f8aaab257b68f9352b2 298 SUPERFAMILY SSF161098 57 286 3.79E-58 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 smi_0604 cb377ddb1e2d7f8aaab257b68f9352b2 298 PANTHER PTHR30193:SF6 8 298 8.0E-90 T 26-04-2016 smi_0604 cb377ddb1e2d7f8aaab257b68f9352b2 298 Gene3D G3DSA:1.10.3720.10 10 289 3.9E-60 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 smi_0604 cb377ddb1e2d7f8aaab257b68f9352b2 298 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 72 287 6.1E-11 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 smi_0604 cb377ddb1e2d7f8aaab257b68f9352b2 298 PANTHER PTHR30193 8 298 8.0E-90 T 26-04-2016 smi_1415 ae2770c778a16f06184eb7dd9f486935 386 PANTHER PTHR30483 31 379 9.5E-100 T 26-04-2016 smi_1415 ae2770c778a16f06184eb7dd9f486935 386 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 293 306 1.04E-9 T 26-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 smi_1415 ae2770c778a16f06184eb7dd9f486935 386 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 63 79 1.04E-9 T 26-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 smi_1415 ae2770c778a16f06184eb7dd9f486935 386 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 82 100 1.04E-9 T 26-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 smi_1415 ae2770c778a16f06184eb7dd9f486935 386 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 344 359 1.04E-9 T 26-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 smi_1415 ae2770c778a16f06184eb7dd9f486935 386 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 41 57 1.04E-9 T 26-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 smi_1415 ae2770c778a16f06184eb7dd9f486935 386 Gene3D G3DSA:3.40.50.2300 40 236 4.1E-55 T 26-04-2016 smi_1415 ae2770c778a16f06184eb7dd9f486935 386 SUPERFAMILY SSF53822 40 380 9.58E-83 T 26-04-2016 IPR028082 Periplasmic binding protein-like I smi_1415 ae2770c778a16f06184eb7dd9f486935 386 Pfam PF13458 Periplasmic binding protein 40 377 2.0E-59 T 26-04-2016 IPR028081 Leucine-binding protein domain smi_1415 ae2770c778a16f06184eb7dd9f486935 386 PANTHER PTHR30483:SF6 31 379 9.5E-100 T 26-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 smi_2014 2bb220803582bf3d8cbd363fd44c0233 66 Gene3D G3DSA:1.10.260.40 3 47 1.2E-8 T 26-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 smi_2014 2bb220803582bf3d8cbd363fd44c0233 66 SUPERFAMILY SSF47413 3 47 2.82E-8 T 26-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 smi_1374 3c3464d4ce8343921391d3c091f5dd3f 211 PANTHER PTHR30383 1 210 1.7E-30 T 26-04-2016 smi_1374 3c3464d4ce8343921391d3c091f5dd3f 211 SUPERFAMILY SSF52266 5 210 1.02E-50 T 26-04-2016 IPR013830 SGNH hydrolase-type esterase domain smi_1374 3c3464d4ce8343921391d3c091f5dd3f 211 Gene3D G3DSA:3.40.50.1110 3 210 9.9E-58 T 26-04-2016 IPR013830 SGNH hydrolase-type esterase domain smi_1374 3c3464d4ce8343921391d3c091f5dd3f 211 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 36 201 6.4E-22 T 26-04-2016 IPR013830 SGNH hydrolase-type esterase domain smi_1010 16a57f9e96c0f43916ae0c83d55558cc 426 PIRSF PIRSF001434 1 426 1.9E-133 T 26-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 smi_1010 16a57f9e96c0f43916ae0c83d55558cc 426 Gene3D G3DSA:3.40.640.10 6 288 2.8E-124 T 26-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 smi_1010 16a57f9e96c0f43916ae0c83d55558cc 426 PANTHER PTHR11808 267 426 3.0E-245 T 26-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 smi_1010 16a57f9e96c0f43916ae0c83d55558cc 426 PANTHER PTHR11808 1 237 3.0E-245 T 26-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 smi_1010 16a57f9e96c0f43916ae0c83d55558cc 426 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 8 424 2.7E-142 T 26-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 smi_1010 16a57f9e96c0f43916ae0c83d55558cc 426 TIGRFAM TIGR01326 OAH_OAS_sulfhy: O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase 6 424 1.2E-195 T 26-04-2016 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 KEGG: 00270+2.5.1.49|MetaCyc: PWY-5344|MetaCyc: PWY-7174 smi_1010 16a57f9e96c0f43916ae0c83d55558cc 426 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 200 214 - T 26-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 smi_1010 16a57f9e96c0f43916ae0c83d55558cc 426 PANTHER PTHR11808:SF12 267 426 3.0E-245 T 26-04-2016 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 KEGG: 00270+2.5.1.49|MetaCyc: PWY-5344|MetaCyc: PWY-7174 smi_1010 16a57f9e96c0f43916ae0c83d55558cc 426 PANTHER PTHR11808:SF12 1 237 3.0E-245 T 26-04-2016 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 KEGG: 00270+2.5.1.49|MetaCyc: PWY-5344|MetaCyc: PWY-7174 smi_1010 16a57f9e96c0f43916ae0c83d55558cc 426 SUPERFAMILY SSF53383 6 423 6.97E-131 T 26-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase smi_1010 16a57f9e96c0f43916ae0c83d55558cc 426 Gene3D G3DSA:3.90.1150.10 290 426 3.4E-49 T 26-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 smi_0888 7f79f1285a915ad7ddcb9a93b94650df 196 Gene3D G3DSA:3.40.50.150 13 193 4.0E-35 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase smi_0888 7f79f1285a915ad7ddcb9a93b94650df 196 SUPERFAMILY SSF53335 9 195 2.43E-39 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase smi_0888 7f79f1285a915ad7ddcb9a93b94650df 196 PANTHER PTHR18895 1 194 6.1E-100 T 26-04-2016 smi_0888 7f79f1285a915ad7ddcb9a93b94650df 196 PANTHER PTHR18895:SF72 1 194 6.1E-100 T 26-04-2016 smi_0888 7f79f1285a915ad7ddcb9a93b94650df 196 Pfam PF05175 Methyltransferase small domain 28 192 1.1E-53 T 26-04-2016 IPR007848 Methyltransferase small domain GO:0008168 smi_1353 bafdacc4a97572286b2b615cae634b38 404 SMART SM00981 74 165 2.1E-22 T 26-04-2016 IPR004114 THUMP domain GO:0003723 smi_1353 bafdacc4a97572286b2b615cae634b38 404 Hamap MF_00021 tRNA sulfurtransferase [thiI]. 1 404 167.609 T 26-04-2016 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 UniPathway: UPA00060 smi_1353 bafdacc4a97572286b2b615cae634b38 404 SUPERFAMILY SSF143437 3 173 4.36E-53 T 26-04-2016 smi_1353 bafdacc4a97572286b2b615cae634b38 404 SUPERFAMILY SSF52402 174 387 5.73E-51 T 26-04-2016 smi_1353 bafdacc4a97572286b2b615cae634b38 404 PANTHER PTHR14911 1 400 2.7E-188 T 26-04-2016 smi_1353 bafdacc4a97572286b2b615cae634b38 404 Gene3D G3DSA:3.40.50.620 173 333 1.7E-50 T 26-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold smi_1353 bafdacc4a97572286b2b615cae634b38 404 PANTHER PTHR14911:SF16 1 400 2.7E-188 T 26-04-2016 smi_1353 bafdacc4a97572286b2b615cae634b38 404 TIGRFAM TIGR00342 TIGR00342: tRNA sulfurtransferase ThiI 6 372 6.2E-120 T 26-04-2016 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 UniPathway: UPA00060 smi_1353 bafdacc4a97572286b2b615cae634b38 404 Pfam PF02926 THUMP domain 59 163 2.6E-18 T 26-04-2016 IPR004114 THUMP domain GO:0003723 smi_1353 bafdacc4a97572286b2b615cae634b38 404 Pfam PF02568 Thiamine biosynthesis protein (ThiI) 175 370 1.6E-62 T 26-04-2016 IPR020536 Thil, AANH domain GO:0004810 UniPathway: UPA00060 smi_0483 26423773c144dbf8551d61f4f0a3fae9 255 PANTHER PTHR36701 23 250 5.6E-79 T 26-04-2016 smi_0483 26423773c144dbf8551d61f4f0a3fae9 255 Pfam PF02677 Uncharacterized BCR, COG1636 39 217 1.7E-64 T 26-04-2016 IPR003828 Protein of unknown function DUF208 smi_1351 d233d588e304a07245bb8f0eec8d53f1 246 SUPERFAMILY SSF53474 3 243 4.74E-22 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold smi_1351 d233d588e304a07245bb8f0eec8d53f1 246 Gene3D G3DSA:3.40.50.1820 2 243 1.4E-23 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold smi_1351 d233d588e304a07245bb8f0eec8d53f1 246 Pfam PF00756 Putative esterase 63 238 6.9E-15 T 26-04-2016 IPR000801 Putative esterase smi_0012 2e379891b102de12624f2ed6169f7e19 652 SMART SM00382 219 358 2.1E-23 T 26-04-2016 IPR003593 AAA+ ATPase domain smi_0012 2e379891b102de12624f2ed6169f7e19 652 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 223 355 1.2E-44 T 26-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 smi_0012 2e379891b102de12624f2ed6169f7e19 652 Gene3D G3DSA:1.10.8.60 366 430 8.8E-27 T 26-04-2016 smi_0012 2e379891b102de12624f2ed6169f7e19 652 Pfam PF06480 FtsH Extracellular 13 98 8.1E-8 T 26-04-2016 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 smi_0012 2e379891b102de12624f2ed6169f7e19 652 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 134 623 3.0E-226 T 26-04-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 smi_0012 2e379891b102de12624f2ed6169f7e19 652 SUPERFAMILY SSF140990 438 628 3.27E-68 T 26-04-2016 smi_0012 2e379891b102de12624f2ed6169f7e19 652 PANTHER PTHR23076 9 638 0.0 T 26-04-2016 smi_0012 2e379891b102de12624f2ed6169f7e19 652 PANTHER PTHR23076:SF10 9 638 0.0 T 26-04-2016 smi_0012 2e379891b102de12624f2ed6169f7e19 652 ProSitePatterns PS00674 AAA-protein family signature. 326 344 - T 26-04-2016 IPR003960 ATPase, AAA-type, conserved site GO:0005524 smi_0012 2e379891b102de12624f2ed6169f7e19 652 Gene3D G3DSA:3.40.50.300 182 365 1.7E-62 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0012 2e379891b102de12624f2ed6169f7e19 652 Pfam PF01434 Peptidase family M41 418 622 6.8E-79 T 26-04-2016 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 smi_0012 2e379891b102de12624f2ed6169f7e19 652 SUPERFAMILY SSF52540 180 426 3.94E-71 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0012 2e379891b102de12624f2ed6169f7e19 652 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 11 636 36.973 T 26-04-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 smi_0521 7ac932708360acc7ad2c508d4c8d095e 493 Pfam PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain 239 433 2.5E-37 T 26-04-2016 IPR005850 Galactose-1-phosphate uridyl transferase, C-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 smi_0521 7ac932708360acc7ad2c508d4c8d095e 493 Pfam PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain 16 224 5.5E-40 T 26-04-2016 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 smi_0521 7ac932708360acc7ad2c508d4c8d095e 493 PANTHER PTHR39191 1 493 3.2E-210 T 26-04-2016 smi_0521 7ac932708360acc7ad2c508d4c8d095e 493 PIRSF PIRSF006005 1 491 1.2E-238 T 26-04-2016 IPR000766 Galactose-1-phosphate uridyl transferase, class II GO:0005737|GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 smi_0521 7ac932708360acc7ad2c508d4c8d095e 493 ProSitePatterns PS01163 Galactose-1-phosphate uridyl transferase family 2 signature. 252 269 - T 26-04-2016 IPR023425 Galactose-1-phosphate uridyl transferase, class II, conserved site GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 smi_0521 7ac932708360acc7ad2c508d4c8d095e 493 TIGRFAM TIGR01239 galT_2: galactose-1-phosphate uridylyltransferase 4 488 2.8E-232 T 26-04-2016 IPR000766 Galactose-1-phosphate uridyl transferase, class II GO:0005737|GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 smi_0521 7ac932708360acc7ad2c508d4c8d095e 493 PANTHER PTHR39191:SF1 1 493 3.2E-210 T 26-04-2016 smi_0521 7ac932708360acc7ad2c508d4c8d095e 493 Hamap MF_00571 Galactose-1-phosphate uridylyltransferase [galT]. 1 493 276.752 T 26-04-2016 IPR000766 Galactose-1-phosphate uridyl transferase, class II GO:0005737|GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 smi_0232 e97be5a422bf0dcac70a09cf920cc2f2 336 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 157 314 2.1E-63 T 26-04-2016 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: REACT_474 smi_0232 e97be5a422bf0dcac70a09cf920cc2f2 336 SMART SM00846 3 152 8.8E-81 T 26-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 smi_0232 e97be5a422bf0dcac70a09cf920cc2f2 336 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 173 189 1.4E-30 T 26-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 smi_0232 e97be5a422bf0dcac70a09cf920cc2f2 336 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 110 123 1.4E-30 T 26-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 smi_0232 e97be5a422bf0dcac70a09cf920cc2f2 336 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 267 282 1.4E-30 T 26-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 smi_0232 e97be5a422bf0dcac70a09cf920cc2f2 336 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 231 248 1.4E-30 T 26-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 smi_0232 e97be5a422bf0dcac70a09cf920cc2f2 336 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 146 164 1.4E-30 T 26-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 smi_0232 e97be5a422bf0dcac70a09cf920cc2f2 336 Gene3D G3DSA:3.30.360.10 161 316 3.7E-70 T 26-04-2016 smi_0232 e97be5a422bf0dcac70a09cf920cc2f2 336 PANTHER PTHR10836 1 334 2.7E-238 T 26-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 smi_0232 e97be5a422bf0dcac70a09cf920cc2f2 336 Gene3D G3DSA:3.40.50.720 1 160 2.0E-67 T 26-04-2016 IPR016040 NAD(P)-binding domain smi_0232 e97be5a422bf0dcac70a09cf920cc2f2 336 SUPERFAMILY SSF51735 3 168 1.21E-56 T 26-04-2016 IPR016040 NAD(P)-binding domain smi_0232 e97be5a422bf0dcac70a09cf920cc2f2 336 PIRSF PIRSF000149 1 336 5.2E-113 T 26-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 smi_0232 e97be5a422bf0dcac70a09cf920cc2f2 336 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 326 5.9E-131 T 26-04-2016 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: REACT_474|UniPathway: UPA00109 smi_0232 e97be5a422bf0dcac70a09cf920cc2f2 336 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 150 157 - T 26-04-2016 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: REACT_474 smi_0232 e97be5a422bf0dcac70a09cf920cc2f2 336 SUPERFAMILY SSF55347 151 314 7.44E-67 T 26-04-2016 smi_0232 e97be5a422bf0dcac70a09cf920cc2f2 336 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 152 5.5E-52 T 26-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 smi_0232 e97be5a422bf0dcac70a09cf920cc2f2 336 PANTHER PTHR10836:SF57 1 334 2.7E-238 T 26-04-2016 smi_2048 68d71e2be0cd72088c08f35f9d2f008c 359 PANTHER PTHR31528 26 358 5.6E-156 T 26-04-2016 IPR027939 NMT1/THI5 family GO:0009228 UniPathway: UPA00060 smi_2048 68d71e2be0cd72088c08f35f9d2f008c 359 PANTHER PTHR31528:SF3 26 358 5.6E-156 T 26-04-2016 smi_2048 68d71e2be0cd72088c08f35f9d2f008c 359 SUPERFAMILY SSF53850 66 348 1.65E-47 T 26-04-2016 smi_2048 68d71e2be0cd72088c08f35f9d2f008c 359 Pfam PF09084 NMT1/THI5 like 73 287 3.0E-75 T 26-04-2016 IPR015168 SsuA/THI5-like smi_2048 68d71e2be0cd72088c08f35f9d2f008c 359 Gene3D G3DSA:3.40.190.10 144 270 1.1E-9 T 26-04-2016 smi_0221 5fc803f77421e3f0c193888ee73cad7a 161 SUPERFAMILY SSF55804 5 147 7.59E-33 T 26-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 smi_0221 5fc803f77421e3f0c193888ee73cad7a 161 PANTHER PTHR36203 1 153 2.6E-42 T 26-04-2016 smi_0221 5fc803f77421e3f0c193888ee73cad7a 161 Gene3D G3DSA:3.40.930.10 5 152 4.4E-51 T 26-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- smi_0221 5fc803f77421e3f0c193888ee73cad7a 161 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 7 147 3.0E-33 T 26-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- smi_1624 b52ad809365ed336bc9ce0ad66c17320 438 Gene3D G3DSA:1.10.940.10 6 156 3.3E-43 T 26-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 smi_1624 b52ad809365ed336bc9ce0ad66c17320 438 Pfam PF01189 16S rRNA methyltransferase RsmB/F 241 434 3.1E-55 T 26-04-2016 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 smi_1624 b52ad809365ed336bc9ce0ad66c17320 438 Pfam PF01029 NusB family 7 129 1.4E-28 T 26-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 smi_1624 b52ad809365ed336bc9ce0ad66c17320 438 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 319 331 2.1E-29 T 26-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 smi_1624 b52ad809365ed336bc9ce0ad66c17320 438 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 418 435 2.1E-29 T 26-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 smi_1624 b52ad809365ed336bc9ce0ad66c17320 438 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 222 236 2.1E-29 T 26-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 smi_1624 b52ad809365ed336bc9ce0ad66c17320 438 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 251 261 2.1E-29 T 26-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 smi_1624 b52ad809365ed336bc9ce0ad66c17320 438 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 369 385 2.1E-29 T 26-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 smi_1624 b52ad809365ed336bc9ce0ad66c17320 438 SUPERFAMILY SSF48013 7 155 1.18E-33 T 26-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 smi_1624 b52ad809365ed336bc9ce0ad66c17320 438 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 318 329 - T 26-04-2016 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 smi_1624 b52ad809365ed336bc9ce0ad66c17320 438 PANTHER PTHR22807:SF30 17 437 1.2E-119 T 26-04-2016 smi_1624 b52ad809365ed336bc9ce0ad66c17320 438 SUPERFAMILY SSF53335 144 436 3.99E-65 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase smi_1624 b52ad809365ed336bc9ce0ad66c17320 438 TIGRFAM TIGR00563 rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase 9 435 4.3E-114 T 26-04-2016 IPR004573 rRNA small subunit methyltransferase B GO:0006364|GO:0008649 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 smi_1624 b52ad809365ed336bc9ce0ad66c17320 438 PANTHER PTHR22807 17 437 1.2E-119 T 26-04-2016 smi_1624 b52ad809365ed336bc9ce0ad66c17320 438 Gene3D G3DSA:3.40.50.150 232 436 5.7E-57 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase smi_1387 9ab1d0a17574192a8a62ae3f71f7030f 215 PANTHER PTHR20855:SF3 15 215 5.9E-54 T 26-04-2016 IPR005744 Hly-III GO:0016021|GO:0019835 smi_1387 9ab1d0a17574192a8a62ae3f71f7030f 215 Pfam PF03006 Haemolysin-III related 14 208 1.8E-30 T 26-04-2016 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 smi_1387 9ab1d0a17574192a8a62ae3f71f7030f 215 TIGRFAM TIGR01065 hlyIII: channel protein, hemolysin III family 15 215 1.3E-65 T 26-04-2016 IPR005744 Hly-III GO:0016021|GO:0019835 smi_1387 9ab1d0a17574192a8a62ae3f71f7030f 215 PANTHER PTHR20855 15 215 5.9E-54 T 26-04-2016 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 smi_1138 5b5c566bb0a2b476db9b89f331846798 364 Hamap MF_00323 Ferrochelatase [hemH]. 1 294 28.537 T 26-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 smi_1138 5b5c566bb0a2b476db9b89f331846798 364 TIGRFAM TIGR00109 hemH: ferrochelatase 2 292 5.7E-54 T 26-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 smi_1138 5b5c566bb0a2b476db9b89f331846798 364 ProSitePatterns PS00534 Ferrochelatase signature. 164 182 - T 26-04-2016 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 smi_1138 5b5c566bb0a2b476db9b89f331846798 364 PANTHER PTHR11108 2 293 1.0E-85 T 26-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 smi_1138 5b5c566bb0a2b476db9b89f331846798 364 Gene3D G3DSA:3.40.50.1400 173 292 6.1E-32 T 26-04-2016 smi_1138 5b5c566bb0a2b476db9b89f331846798 364 SUPERFAMILY SSF53800 2 292 1.08E-65 T 26-04-2016 smi_1138 5b5c566bb0a2b476db9b89f331846798 364 Gene3D G3DSA:3.40.50.1400 2 172 2.8E-30 T 26-04-2016 smi_1138 5b5c566bb0a2b476db9b89f331846798 364 Pfam PF00762 Ferrochelatase 2 292 4.6E-63 T 26-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 smi_1515 7ec5538878eac2352d2e9247c7e7f026 164 Gene3D G3DSA:2.30.30.330 2 160 8.5E-30 T 26-04-2016 smi_1515 7ec5538878eac2352d2e9247c7e7f026 164 Pfam PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family 2 102 8.7E-9 T 26-04-2016 IPR024453 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family smi_1515 7ec5538878eac2352d2e9247c7e7f026 164 SUPERFAMILY SSF54001 2 155 1.18E-24 T 26-04-2016 smi_0086 c60d12c576c2480d2db3a9c7ee0a0e4e 395 Gene3D G3DSA:3.40.33.10 55 200 5.6E-17 T 26-04-2016 IPR014044 CAP domain smi_0086 c60d12c576c2480d2db3a9c7ee0a0e4e 395 Pfam PF00188 Cysteine-rich secretory protein family 69 197 5.5E-12 T 26-04-2016 IPR014044 CAP domain smi_0086 c60d12c576c2480d2db3a9c7ee0a0e4e 395 Pfam PF01473 Putative cell wall binding repeat 297 315 2.2E-6 T 26-04-2016 IPR018337 Cell wall/choline-binding repeat smi_0086 c60d12c576c2480d2db3a9c7ee0a0e4e 395 Pfam PF01473 Putative cell wall binding repeat 277 295 1.2E-5 T 26-04-2016 IPR018337 Cell wall/choline-binding repeat smi_0086 c60d12c576c2480d2db3a9c7ee0a0e4e 395 Pfam PF01473 Putative cell wall binding repeat 317 335 0.0011 T 26-04-2016 IPR018337 Cell wall/choline-binding repeat smi_0086 c60d12c576c2480d2db3a9c7ee0a0e4e 395 Pfam PF01473 Putative cell wall binding repeat 258 269 0.5 T 26-04-2016 IPR018337 Cell wall/choline-binding repeat smi_0086 c60d12c576c2480d2db3a9c7ee0a0e4e 395 Pfam PF01473 Putative cell wall binding repeat 357 374 0.0019 T 26-04-2016 IPR018337 Cell wall/choline-binding repeat smi_0086 c60d12c576c2480d2db3a9c7ee0a0e4e 395 Pfam PF01473 Putative cell wall binding repeat 337 355 8.7E-6 T 26-04-2016 IPR018337 Cell wall/choline-binding repeat smi_0086 c60d12c576c2480d2db3a9c7ee0a0e4e 395 SUPERFAMILY SSF55797 61 197 4.32E-17 T 26-04-2016 IPR014044 CAP domain smi_0086 c60d12c576c2480d2db3a9c7ee0a0e4e 395 SMART SM00198 63 207 0.0077 T 26-04-2016 IPR014044 CAP domain smi_0086 c60d12c576c2480d2db3a9c7ee0a0e4e 395 Gene3D G3DSA:2.10.270.10 258 326 7.2E-24 T 26-04-2016 smi_0086 c60d12c576c2480d2db3a9c7ee0a0e4e 395 Gene3D G3DSA:2.10.270.10 327 393 8.5E-20 T 26-04-2016 smi_0086 c60d12c576c2480d2db3a9c7ee0a0e4e 395 SUPERFAMILY SSF69360 252 394 6.91E-49 T 26-04-2016 smi_1594 b7ce017861073a77073ab6e9040b6036 128 Gene3D G3DSA:1.10.1520.10 3 127 1.3E-51 T 26-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 smi_1594 b7ce017861073a77073ab6e9040b6036 128 SUPERFAMILY SSF69065 3 126 2.27E-44 T 26-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 smi_1594 b7ce017861073a77073ab6e9040b6036 128 Hamap MF_01468 Mini-ribonuclease 3 [mrnC]. 1 127 28.76 T 26-04-2016 IPR008226 Mini-ribonuclease 3 family smi_1594 b7ce017861073a77073ab6e9040b6036 128 Pfam PF00636 Ribonuclease III domain 12 109 3.1E-14 T 26-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 smi_1594 b7ce017861073a77073ab6e9040b6036 128 PANTHER PTHR34276 2 124 1.0E-55 T 26-04-2016 smi_1594 b7ce017861073a77073ab6e9040b6036 128 PIRSF PIRSF005520 1 128 2.5E-52 T 26-04-2016 IPR008226 Mini-ribonuclease 3 family smi_0994 3b6f1389f0227fe6fd6488997e43d898 338 Gene3D G3DSA:3.40.50.2000 123 267 1.5E-17 T 26-04-2016 smi_0994 3b6f1389f0227fe6fd6488997e43d898 338 Pfam PF13439 Glycosyltransferase Family 4 41 137 7.3E-7 T 26-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain smi_0994 3b6f1389f0227fe6fd6488997e43d898 338 Pfam PF00534 Glycosyl transferases group 1 151 311 2.5E-16 T 26-04-2016 IPR001296 Glycosyl transferase, family 1 smi_0994 3b6f1389f0227fe6fd6488997e43d898 338 PANTHER PTHR12526 32 331 1.8E-41 T 26-04-2016 smi_0994 3b6f1389f0227fe6fd6488997e43d898 338 SUPERFAMILY SSF53756 22 331 2.41E-51 T 26-04-2016 smi_1812 19bcbf60a89c0b27cea90e08f009bbc8 282 Gene3D G3DSA:2.40.30.90 170 276 4.4E-26 T 26-04-2016 IPR023227 S-adenosyl-l-methionine hydroxide adenosyltransferase, C-terminal smi_1812 19bcbf60a89c0b27cea90e08f009bbc8 282 SUPERFAMILY SSF102522 4 167 4.18E-55 T 26-04-2016 IPR023228 S-adenosyl-l-methionine hydroxide adenosyltransferase, N-terminal smi_1812 19bcbf60a89c0b27cea90e08f009bbc8 282 SUPERFAMILY SSF101852 170 276 5.1E-29 T 26-04-2016 IPR023227 S-adenosyl-l-methionine hydroxide adenosyltransferase, C-terminal smi_1812 19bcbf60a89c0b27cea90e08f009bbc8 282 PANTHER PTHR35092 2 282 3.6E-194 T 26-04-2016 smi_1812 19bcbf60a89c0b27cea90e08f009bbc8 282 PANTHER PTHR35092:SF2 2 282 3.6E-194 T 26-04-2016 smi_1812 19bcbf60a89c0b27cea90e08f009bbc8 282 Pfam PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase 6 273 2.5E-68 T 26-04-2016 IPR002747 SAM-dependent chlorinase/fluorinase smi_1812 19bcbf60a89c0b27cea90e08f009bbc8 282 PIRSF PIRSF006779 1 278 2.1E-96 T 26-04-2016 IPR002747 SAM-dependent chlorinase/fluorinase smi_1296 65da8b05c5628860a960f9b79fb1c2aa 496 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 9 496 1.2E-211 T 26-04-2016 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6 smi_1296 65da8b05c5628860a960f9b79fb1c2aa 496 SUPERFAMILY SSF50249 8 149 1.71E-43 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold smi_1296 65da8b05c5628860a960f9b79fb1c2aa 496 Gene3D G3DSA:2.40.50.140 10 149 1.4E-49 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold smi_1296 65da8b05c5628860a960f9b79fb1c2aa 496 SUPERFAMILY SSF55681 156 495 9.0E-120 T 26-04-2016 smi_1296 65da8b05c5628860a960f9b79fb1c2aa 496 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 15 496 43.678 T 26-04-2016 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6 smi_1296 65da8b05c5628860a960f9b79fb1c2aa 496 PANTHER PTHR22594:SF4 4 496 1.2E-272 T 26-04-2016 smi_1296 65da8b05c5628860a960f9b79fb1c2aa 496 Gene3D G3DSA:3.30.930.10 151 494 2.7E-122 T 26-04-2016 smi_1296 65da8b05c5628860a960f9b79fb1c2aa 496 Pfam PF01336 OB-fold nucleic acid binding domain 64 138 4.0E-15 T 26-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 smi_1296 65da8b05c5628860a960f9b79fb1c2aa 496 PRINTS PR00982 Lysyl-tRNA synthetase signature 380 396 7.1E-39 T 26-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 smi_1296 65da8b05c5628860a960f9b79fb1c2aa 496 PRINTS PR00982 Lysyl-tRNA synthetase signature 193 203 7.1E-39 T 26-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 smi_1296 65da8b05c5628860a960f9b79fb1c2aa 496 PRINTS PR00982 Lysyl-tRNA synthetase signature 256 273 7.1E-39 T 26-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 smi_1296 65da8b05c5628860a960f9b79fb1c2aa 496 PRINTS PR00982 Lysyl-tRNA synthetase signature 238 251 7.1E-39 T 26-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 smi_1296 65da8b05c5628860a960f9b79fb1c2aa 496 PRINTS PR00982 Lysyl-tRNA synthetase signature 209 225 7.1E-39 T 26-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 smi_1296 65da8b05c5628860a960f9b79fb1c2aa 496 Pfam PF00152 tRNA synthetases class II (D, K and N) 157 495 8.8E-81 T 26-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 smi_1296 65da8b05c5628860a960f9b79fb1c2aa 496 PANTHER PTHR22594 4 496 1.2E-272 T 26-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 smi_1943 22d280c0400923cbfbf3291676459626 457 Gene3D G3DSA:3.40.630.10 397 456 1.7E-56 T 26-04-2016 smi_1943 22d280c0400923cbfbf3291676459626 457 Gene3D G3DSA:3.40.630.10 20 211 1.7E-56 T 26-04-2016 smi_1943 22d280c0400923cbfbf3291676459626 457 SUPERFAMILY SSF53187 371 456 2.37E-49 T 26-04-2016 smi_1943 22d280c0400923cbfbf3291676459626 457 SUPERFAMILY SSF53187 17 201 2.37E-49 T 26-04-2016 smi_1943 22d280c0400923cbfbf3291676459626 457 PANTHER PTHR11014:SF15 289 456 3.6E-125 T 26-04-2016 smi_1943 22d280c0400923cbfbf3291676459626 457 PANTHER PTHR11014:SF15 1 269 3.6E-125 T 26-04-2016 smi_1943 22d280c0400923cbfbf3291676459626 457 PANTHER PTHR11014 289 456 3.6E-125 T 26-04-2016 smi_1943 22d280c0400923cbfbf3291676459626 457 PANTHER PTHR11014 1 269 3.6E-125 T 26-04-2016 smi_1943 22d280c0400923cbfbf3291676459626 457 Pfam PF01546 Peptidase family M20/M25/M40 86 454 2.2E-32 T 26-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 smi_1943 22d280c0400923cbfbf3291676459626 457 Gene3D G3DSA:3.30.70.360 212 368 7.2E-52 T 26-04-2016 IPR011650 Peptidase M20, dimerisation domain smi_1943 22d280c0400923cbfbf3291676459626 457 Pfam PF07687 Peptidase dimerisation domain 199 356 4.0E-21 T 26-04-2016 IPR011650 Peptidase M20, dimerisation domain smi_0713 14328a58c472a959edd9935de10addaa 342 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 1 342 46.666 T 26-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 smi_0713 14328a58c472a959edd9935de10addaa 342 SUPERFAMILY SSF111337 1 341 2.49E-138 T 26-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 smi_0713 14328a58c472a959edd9935de10addaa 342 Pfam PF02547 Queuosine biosynthesis protein 4 341 2.0E-140 T 26-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 smi_0713 14328a58c472a959edd9935de10addaa 342 PANTHER PTHR30307:SF0 2 342 1.1E-178 T 26-04-2016 smi_0713 14328a58c472a959edd9935de10addaa 342 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1 341 1.8E-139 T 26-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 smi_0713 14328a58c472a959edd9935de10addaa 342 Gene3D G3DSA:3.40.1780.10 1 62 3.2E-100 T 26-04-2016 smi_0713 14328a58c472a959edd9935de10addaa 342 Gene3D G3DSA:3.40.1780.10 178 341 3.2E-100 T 26-04-2016 smi_0713 14328a58c472a959edd9935de10addaa 342 PANTHER PTHR30307 2 342 1.1E-178 T 26-04-2016 smi_0713 14328a58c472a959edd9935de10addaa 342 Gene3D G3DSA:2.40.10.240 64 143 9.0E-31 T 26-04-2016 smi_0380 e90d812e2ca109b6fcd9c914c52fd16f 116 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 8 97 2.0E-45 T 26-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 smi_0380 e90d812e2ca109b6fcd9c914c52fd16f 116 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 1 115 9.2E-32 T 26-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 smi_0380 e90d812e2ca109b6fcd9c914c52fd16f 116 Pfam PF02033 Ribosome-binding factor A 6 110 1.1E-30 T 26-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 smi_0380 e90d812e2ca109b6fcd9c914c52fd16f 116 SUPERFAMILY SSF89919 1 113 3.79E-30 T 26-04-2016 IPR023799 Ribosome-binding factor A domain smi_0380 e90d812e2ca109b6fcd9c914c52fd16f 116 PANTHER PTHR33515 1 116 2.6E-42 T 26-04-2016 smi_0380 e90d812e2ca109b6fcd9c914c52fd16f 116 ProSitePatterns PS01319 Ribosome-binding factor A signature. 76 97 - T 26-04-2016 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 smi_0380 e90d812e2ca109b6fcd9c914c52fd16f 116 Gene3D G3DSA:3.30.300.20 3 115 1.4E-37 T 26-04-2016 IPR015946 K homology domain-like, alpha/beta smi_0380 e90d812e2ca109b6fcd9c914c52fd16f 116 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 2 114 19.776 T 26-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 smi_1480 92a2d21247dffff8bf15de6e15f9a5ff 205 SUPERFAMILY SSF53474 3 201 2.11E-24 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold smi_1480 92a2d21247dffff8bf15de6e15f9a5ff 205 PANTHER PTHR10992 3 203 1.2E-12 T 26-04-2016 smi_1480 92a2d21247dffff8bf15de6e15f9a5ff 205 Gene3D G3DSA:3.40.50.1820 3 93 3.9E-21 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold smi_1480 92a2d21247dffff8bf15de6e15f9a5ff 205 Gene3D G3DSA:3.40.50.1820 135 202 3.9E-21 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold smi_1480 92a2d21247dffff8bf15de6e15f9a5ff 205 PANTHER PTHR10992:SF768 3 203 1.2E-12 T 26-04-2016 smi_1480 92a2d21247dffff8bf15de6e15f9a5ff 205 Pfam PF12697 Alpha/beta hydrolase family 3 195 1.9E-6 T 26-04-2016 IPR000073 Alpha/beta hydrolase fold-1 smi_0444 b840167eaf4e69def7979afc4c89a821 475 TIGRFAM TIGR01538 portal_SPP1: phage portal protein, SPP1 family 19 423 3.8E-54 T 26-04-2016 IPR006428 Portal protein, SPP1-type smi_0444 b840167eaf4e69def7979afc4c89a821 475 Pfam PF05133 Phage portal protein, SPP1 Gp6-like 28 451 2.0E-70 T 26-04-2016 IPR021145 Portal protein, SPP1 Gp6-like smi_1466 7e46896b014a1bf7b3fae28269589a87 185 Gene3D G3DSA:2.40.128.50 100 179 5.4E-12 T 26-04-2016 IPR027279 D-aminopeptidase/lipoprotein domain smi_1466 7e46896b014a1bf7b3fae28269589a87 185 Pfam PF12182 Bacterial lipoprotein 102 179 2.7E-9 T 26-04-2016 IPR020961 Domain of unknown function DUF3642, lipoprotein smi_0757 6e503fe922df608d3cf677663e09ac5e 355 Pfam PF01761 3-dehydroquinate synthase 70 323 8.0E-101 T 26-04-2016 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 smi_0757 6e503fe922df608d3cf677663e09ac5e 355 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 12 348 9.6E-124 T 26-04-2016 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 smi_0757 6e503fe922df608d3cf677663e09ac5e 355 Gene3D G3DSA:1.20.1090.10 174 353 8.6E-57 T 26-04-2016 smi_0757 6e503fe922df608d3cf677663e09ac5e 355 PANTHER PTHR21090 1 353 7.7E-151 T 26-04-2016 smi_0757 6e503fe922df608d3cf677663e09ac5e 355 PIRSF PIRSF001455 5 354 3.7E-106 T 26-04-2016 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 smi_0757 6e503fe922df608d3cf677663e09ac5e 355 Gene3D G3DSA:3.40.50.1970 2 172 2.1E-65 T 26-04-2016 smi_0757 6e503fe922df608d3cf677663e09ac5e 355 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 1 355 38.455 T 26-04-2016 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 smi_0757 6e503fe922df608d3cf677663e09ac5e 355 SUPERFAMILY SSF56796 2 353 6.67E-107 T 26-04-2016 smi_0666 64be146f9f71c2f28c7fa9ec81bdd196 239 Gene3D G3DSA:3.50.50.60 141 211 6.3E-22 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 smi_0666 64be146f9f71c2f28c7fa9ec81bdd196 239 Gene3D G3DSA:3.50.50.60 1 80 6.3E-22 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 smi_0666 64be146f9f71c2f28c7fa9ec81bdd196 239 PANTHER PTHR13847 4 238 2.8E-91 T 26-04-2016 smi_0666 64be146f9f71c2f28c7fa9ec81bdd196 239 Pfam PF01266 FAD dependent oxidoreductase 3 220 2.2E-29 T 26-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 smi_0666 64be146f9f71c2f28c7fa9ec81bdd196 239 PANTHER PTHR13847:SF211 4 238 2.8E-91 T 26-04-2016 smi_0666 64be146f9f71c2f28c7fa9ec81bdd196 239 SUPERFAMILY SSF51905 1 234 1.73E-22 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 smi_0374 69caad51c831783f14fafe375f00eb40 211 Pfam PF02390 Putative methyltransferase 38 206 4.9E-47 T 26-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 smi_0374 69caad51c831783f14fafe375f00eb40 211 Gene3D G3DSA:3.40.50.150 43 157 1.0E-11 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase smi_0374 69caad51c831783f14fafe375f00eb40 211 PANTHER PTHR23417 1 210 2.0E-65 T 26-04-2016 smi_0374 69caad51c831783f14fafe375f00eb40 211 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 1 211 28.248 T 26-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 smi_0374 69caad51c831783f14fafe375f00eb40 211 PANTHER PTHR23417:SF14 1 210 2.0E-65 T 26-04-2016 smi_0374 69caad51c831783f14fafe375f00eb40 211 SUPERFAMILY SSF53335 8 207 2.89E-34 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase smi_0374 69caad51c831783f14fafe375f00eb40 211 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 26 209 1.4E-57 T 26-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 smi_1064 ee4220399ab2f8e330912cd952329a7d 1702 TIGRFAM TIGR01168 YSIRK_signal: gram-positive signal peptide, YSIRK family 4 39 1.1E-10 T 26-04-2016 IPR005877 YSIRK Gram-positive signal peptide GO:0016020 smi_1064 ee4220399ab2f8e330912cd952329a7d 1702 Pfam PF06458 MucBP domain 846 938 4.4E-6 T 26-04-2016 IPR009459 MucBP domain smi_1064 ee4220399ab2f8e330912cd952329a7d 1702 Pfam PF06458 MucBP domain 1381 1470 0.76 T 26-04-2016 IPR009459 MucBP domain smi_1064 ee4220399ab2f8e330912cd952329a7d 1702 Gene3D G3DSA:3.10.20.320 843 948 2.2E-6 T 26-04-2016 IPR009459 MucBP domain smi_1064 ee4220399ab2f8e330912cd952329a7d 1702 Pfam PF04650 YSIRK type signal peptide 5 27 1.3E-8 T 26-04-2016 IPR005877 YSIRK Gram-positive signal peptide GO:0016020 smi_1064 ee4220399ab2f8e330912cd952329a7d 1702 TIGRFAM TIGR04308 repeat_SSSPR51: surface protein repeat SSSPR-51 1580 1626 1.4E-18 T 26-04-2016 IPR027579 Surface protein repeat SSSPR-51 smi_2030 39372ae61d287772dccf7a8f224cf050 414 TIGRFAM TIGR04091 LTA_dltB: D-alanyl-lipoteichoic acid biosynthesis protein DltB 12 407 7.4E-164 T 26-04-2016 IPR024024 D-alanyl transfer protein DltB UniPathway: UPA00556 smi_2030 39372ae61d287772dccf7a8f224cf050 414 PIRSF PIRSF500216 10 412 2.8E-179 T 26-04-2016 IPR024024 D-alanyl transfer protein DltB UniPathway: UPA00556 smi_2030 39372ae61d287772dccf7a8f224cf050 414 PIRSF PIRSF016636 13 407 1.9E-75 T 26-04-2016 IPR024194 Alginate O-acetyltransferase AlgI/D-alanyl transfer protein DltB smi_2030 39372ae61d287772dccf7a8f224cf050 414 PANTHER PTHR13285 69 408 5.7E-68 T 26-04-2016 smi_1691 94c07e109143bb917d55cdb83a009e30 117 PANTHER PTHR38445:SF2 6 117 9.0E-14 T 26-04-2016 smi_1691 94c07e109143bb917d55cdb83a009e30 117 SMART SM00345 9 68 1.7E-10 T 26-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 smi_1691 94c07e109143bb917d55cdb83a009e30 117 SUPERFAMILY SSF46785 4 78 1.69E-19 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain smi_1691 94c07e109143bb917d55cdb83a009e30 117 Gene3D G3DSA:1.10.10.10 6 73 2.0E-21 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain smi_1691 94c07e109143bb917d55cdb83a009e30 117 Pfam PF00392 Bacterial regulatory proteins, gntR family 6 68 1.4E-13 T 26-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 smi_1691 94c07e109143bb917d55cdb83a009e30 117 PANTHER PTHR38445 6 117 9.0E-14 T 26-04-2016 smi_0527 31c05861a835d7adfbde214ce83ca7eb 420 Pfam PF00860 Permease family 9 380 1.6E-98 T 26-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 smi_0527 31c05861a835d7adfbde214ce83ca7eb 420 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 331 351 - T 26-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 smi_0527 31c05861a835d7adfbde214ce83ca7eb 420 PANTHER PTHR11119 9 420 8.4E-108 T 26-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 smi_0527 31c05861a835d7adfbde214ce83ca7eb 420 TIGRFAM TIGR03173 pbuX: xanthine permease 13 416 4.2E-148 T 26-04-2016 IPR017588 Uric acid permease UacT-like GO:0006810|GO:0016021 smi_0527 31c05861a835d7adfbde214ce83ca7eb 420 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 8 414 3.1E-117 T 26-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 smi_0652 e73b0d86fcf4575013b4d29d99d15067 349 PANTHER PTHR20992 8 268 1.4E-56 T 26-04-2016 smi_0652 e73b0d86fcf4575013b4d29d99d15067 349 Pfam PF04087 Domain of unknown function (DUF389) 51 187 3.8E-39 T 26-04-2016 IPR005240 Protein of unknown function DUF389 smi_1578 9f29e82aea92f97e61ba8d43f37b1b52 201 SUPERFAMILY SSF55469 1 198 3.4E-51 T 26-04-2016 IPR000415 Nitroreductase-like GO:0016491 smi_1578 9f29e82aea92f97e61ba8d43f37b1b52 201 Pfam PF00881 Nitroreductase family 8 181 6.9E-31 T 26-04-2016 IPR029479 Nitroreductase smi_1578 9f29e82aea92f97e61ba8d43f37b1b52 201 PANTHER PTHR23026:SF115 1 201 6.6E-63 T 26-04-2016 smi_1578 9f29e82aea92f97e61ba8d43f37b1b52 201 Gene3D G3DSA:3.40.109.10 1 199 2.6E-57 T 26-04-2016 IPR000415 Nitroreductase-like GO:0016491 smi_1578 9f29e82aea92f97e61ba8d43f37b1b52 201 PANTHER PTHR23026 1 201 6.6E-63 T 26-04-2016 smi_0039 dd8e3ab2c909ca7d32a71eb2a79de7c8 116 PANTHER PTHR36455:SF1 3 113 3.1E-60 T 26-04-2016 smi_0039 dd8e3ab2c909ca7d32a71eb2a79de7c8 116 Pfam PF05717 IS66 Orf2 like protein 10 104 1.5E-36 T 26-04-2016 IPR008878 Transposase IS66, Orf2 smi_0039 dd8e3ab2c909ca7d32a71eb2a79de7c8 116 PANTHER PTHR36455 3 113 3.1E-60 T 26-04-2016 smi_2059 3c92e6d6211a9e66feef43bff77880ae 211 TIGRFAM TIGR00257 IMPACT_YIGZ: uncharacterized protein, YigZ family 7 197 3.9E-63 T 26-04-2016 IPR015796 Impact family, bacterial/archaeal smi_2059 3c92e6d6211a9e66feef43bff77880ae 211 SUPERFAMILY SSF54211 5 129 1.44E-43 T 26-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold smi_2059 3c92e6d6211a9e66feef43bff77880ae 211 ProSitePatterns PS00910 Uncharacterized protein family UPF0029 signature. 77 106 - T 26-04-2016 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site smi_2059 3c92e6d6211a9e66feef43bff77880ae 211 Gene3D G3DSA:3.30.230.30 4 129 5.4E-49 T 26-04-2016 IPR001498 Impact, N-terminal smi_2059 3c92e6d6211a9e66feef43bff77880ae 211 Gene3D G3DSA:3.30.70.240 137 200 3.3E-9 T 26-04-2016 IPR000640 Translation elongation factor EFG, V domain smi_2059 3c92e6d6211a9e66feef43bff77880ae 211 Pfam PF09186 Domain of unknown function (DUF1949) 138 193 1.2E-12 T 26-04-2016 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal smi_2059 3c92e6d6211a9e66feef43bff77880ae 211 SUPERFAMILY SSF54980 137 197 3.31E-7 T 26-04-2016 IPR009022 Elongation factor G, III-V domain smi_2059 3c92e6d6211a9e66feef43bff77880ae 211 PANTHER PTHR16301 3 203 4.2E-66 T 26-04-2016 IPR023582 Impact family smi_2059 3c92e6d6211a9e66feef43bff77880ae 211 Pfam PF01205 Uncharacterized protein family UPF0029 17 120 1.3E-31 T 26-04-2016 IPR001498 Impact, N-terminal smi_0968 67fb1e5b48899831093837616ab6985e 165 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 130 140 - T 26-04-2016 IPR020549 Endoribonuclease YbeY, conserved site smi_0968 67fb1e5b48899831093837616ab6985e 165 Pfam PF02130 Uncharacterized protein family UPF0054 13 159 1.8E-40 T 26-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 smi_0968 67fb1e5b48899831093837616ab6985e 165 SUPERFAMILY SSF55486 2 164 5.37E-40 T 26-04-2016 smi_0968 67fb1e5b48899831093837616ab6985e 165 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 37 161 5.5E-39 T 26-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 smi_0968 67fb1e5b48899831093837616ab6985e 165 PANTHER PTHR22881 20 80 4.5E-35 T 26-04-2016 smi_0968 67fb1e5b48899831093837616ab6985e 165 PANTHER PTHR22881 96 164 4.5E-35 T 26-04-2016 smi_0968 67fb1e5b48899831093837616ab6985e 165 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 2 164 22.124 T 26-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 smi_0968 67fb1e5b48899831093837616ab6985e 165 Gene3D G3DSA:3.40.390.30 6 164 2.2E-44 T 26-04-2016 IPR023091 Metalloprotease catalytic domain, predicted GO:0004222 smi_1908 ea6d05c7b55f8d211d18ec17fb8da831 208 PANTHER PTHR10285:SF7 21 197 2.3E-45 T 26-04-2016 IPR004566 Bacterial pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 smi_1908 ea6d05c7b55f8d211d18ec17fb8da831 208 Gene3D G3DSA:3.40.50.300 21 205 1.3E-25 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1908 ea6d05c7b55f8d211d18ec17fb8da831 208 SUPERFAMILY SSF52540 21 202 1.83E-15 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1908 ea6d05c7b55f8d211d18ec17fb8da831 208 PANTHER PTHR10285 21 197 2.3E-45 T 26-04-2016 smi_1908 ea6d05c7b55f8d211d18ec17fb8da831 208 PRINTS PR00988 Uridine kinase signature 146 156 3.4E-7 T 26-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 smi_1908 ea6d05c7b55f8d211d18ec17fb8da831 208 PRINTS PR00988 Uridine kinase signature 19 36 3.4E-7 T 26-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 smi_1908 ea6d05c7b55f8d211d18ec17fb8da831 208 PRINTS PR00988 Uridine kinase signature 160 171 3.4E-7 T 26-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 smi_1908 ea6d05c7b55f8d211d18ec17fb8da831 208 PRINTS PR00988 Uridine kinase signature 181 194 3.4E-7 T 26-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 smi_1908 ea6d05c7b55f8d211d18ec17fb8da831 208 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 22 195 5.2E-12 T 26-04-2016 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0008152|GO:0016301 smi_2028 f9d028ccce9ea3c5416a437350d95db7 422 Pfam PF04914 DltD C-terminal region 266 392 1.2E-50 T 26-04-2016 IPR006998 DltD, C-terminal UniPathway: UPA00556 smi_2028 f9d028ccce9ea3c5416a437350d95db7 422 TIGRFAM TIGR04092 LTA_DltD: D-alanyl-lipoteichoic acid biosynthesis protein DltD 9 391 5.0E-132 T 26-04-2016 IPR023896 D-alanyl-lipoteichoic acid biosynthesis DltD UniPathway: UPA00556 smi_2028 f9d028ccce9ea3c5416a437350d95db7 422 Pfam PF04915 DltD N-terminal region 37 98 6.8E-24 T 26-04-2016 IPR006999 DltD, N-terminal UniPathway: UPA00556 smi_2028 f9d028ccce9ea3c5416a437350d95db7 422 PIRSF PIRSF021438 1 394 2.2E-116 T 26-04-2016 IPR023896 D-alanyl-lipoteichoic acid biosynthesis DltD UniPathway: UPA00556 smi_2028 f9d028ccce9ea3c5416a437350d95db7 422 PANTHER PTHR40039 2 422 7.0E-173 T 26-04-2016 smi_2028 f9d028ccce9ea3c5416a437350d95db7 422 PANTHER PTHR40039:SF1 2 422 7.0E-173 T 26-04-2016 smi_2028 f9d028ccce9ea3c5416a437350d95db7 422 Pfam PF04918 DltD central region 99 263 6.8E-44 T 26-04-2016 IPR007002 DltD, central domain UniPathway: UPA00556 smi_0516 58f28d1c5d2d5b1d882757329a490d7a 506 Gene3D G3DSA:3.40.190.10 454 505 4.1E-61 T 26-04-2016 smi_0516 58f28d1c5d2d5b1d882757329a490d7a 506 Gene3D G3DSA:3.40.190.10 231 344 4.1E-61 T 26-04-2016 smi_0516 58f28d1c5d2d5b1d882757329a490d7a 506 SUPERFAMILY SSF53850 236 504 1.3E-73 T 26-04-2016 smi_0516 58f28d1c5d2d5b1d882757329a490d7a 506 Gene3D G3DSA:1.10.3720.10 3 198 1.8E-34 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 smi_0516 58f28d1c5d2d5b1d882757329a490d7a 506 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 34 201 2.0E-20 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 smi_0516 58f28d1c5d2d5b1d882757329a490d7a 506 PANTHER PTHR30177:SF4 1 202 6.1E-232 T 26-04-2016 smi_0516 58f28d1c5d2d5b1d882757329a490d7a 506 PANTHER PTHR30177:SF4 267 504 6.1E-232 T 26-04-2016 smi_0516 58f28d1c5d2d5b1d882757329a490d7a 506 Gene3D G3DSA:3.40.190.120 345 442 5.6E-39 T 26-04-2016 smi_0516 58f28d1c5d2d5b1d882757329a490d7a 506 SUPERFAMILY SSF161098 14 198 1.44E-35 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 smi_0516 58f28d1c5d2d5b1d882757329a490d7a 506 PANTHER PTHR30177 1 202 6.1E-232 T 26-04-2016 smi_0516 58f28d1c5d2d5b1d882757329a490d7a 506 PANTHER PTHR30177 267 504 6.1E-232 T 26-04-2016 smi_0516 58f28d1c5d2d5b1d882757329a490d7a 506 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 236 500 1.8E-66 T 26-04-2016 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 smi_2072 30cdd85b5c05149848ee6b28effd05b0 416 Pfam PF05193 Peptidase M16 inactive domain 180 349 6.4E-25 T 26-04-2016 IPR007863 Peptidase M16, C-terminal smi_2072 30cdd85b5c05149848ee6b28effd05b0 416 PANTHER PTHR11851 238 402 2.1E-14 T 26-04-2016 smi_2072 30cdd85b5c05149848ee6b28effd05b0 416 SUPERFAMILY SSF63411 104 216 3.67E-12 T 26-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 smi_2072 30cdd85b5c05149848ee6b28effd05b0 416 Gene3D G3DSA:3.30.830.10 234 403 3.7E-32 T 26-04-2016 IPR011237 Peptidase M16 domain GO:0046872 smi_2072 30cdd85b5c05149848ee6b28effd05b0 416 Gene3D G3DSA:3.30.830.10 1 229 2.0E-74 T 26-04-2016 IPR011237 Peptidase M16 domain GO:0046872 smi_2072 30cdd85b5c05149848ee6b28effd05b0 416 SUPERFAMILY SSF63411 238 403 2.87E-29 T 26-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 smi_1199 a6f3ceeb53bc86f66916aefe92736013 162 Pfam PF00583 Acetyltransferase (GNAT) family 63 138 4.5E-17 T 26-04-2016 IPR000182 GNAT domain GO:0008080 smi_1199 a6f3ceeb53bc86f66916aefe92736013 162 SUPERFAMILY SSF55729 22 158 2.74E-24 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase smi_1199 a6f3ceeb53bc86f66916aefe92736013 162 Gene3D G3DSA:3.40.630.30 2 158 1.1E-42 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase smi_1199 a6f3ceeb53bc86f66916aefe92736013 162 PANTHER PTHR23091 8 145 4.9E-40 T 26-04-2016 smi_1199 a6f3ceeb53bc86f66916aefe92736013 162 PANTHER PTHR23091:SF228 8 145 4.9E-40 T 26-04-2016 smi_1108 33b6a6a9b580729200a35eba268ff4ec 113 Gene3D G3DSA:1.25.10.10 13 112 6.4E-11 T 26-04-2016 IPR011989 Armadillo-like helical smi_1108 33b6a6a9b580729200a35eba268ff4ec 113 Pfam PF08713 DNA alkylation repair enzyme 9 110 2.5E-7 T 26-04-2016 IPR014825 DNA alkylation repair enzyme smi_1108 33b6a6a9b580729200a35eba268ff4ec 113 SUPERFAMILY SSF48371 4 111 4.8E-22 T 26-04-2016 IPR016024 Armadillo-type fold GO:0005488 smi_0298 30103aa012cd460fe2eb2cba21c57156 220 Pfam PF04263 Thiamin pyrophosphokinase, catalytic domain 32 120 2.6E-17 T 26-04-2016 IPR007371 Thiamin pyrophosphokinase, catalytic domain GO:0004788|GO:0005524|GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356 smi_0298 30103aa012cd460fe2eb2cba21c57156 220 Gene3D G3DSA:3.40.50.10240 14 113 1.9E-24 T 26-04-2016 IPR007371 Thiamin pyrophosphokinase, catalytic domain GO:0004788|GO:0005524|GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356 smi_0298 30103aa012cd460fe2eb2cba21c57156 220 SUPERFAMILY SSF63999 4 136 9.81E-33 T 26-04-2016 IPR007371 Thiamin pyrophosphokinase, catalytic domain GO:0004788|GO:0005524|GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356 smi_0298 30103aa012cd460fe2eb2cba21c57156 220 PANTHER PTHR41299:SF1 9 220 1.8E-65 T 26-04-2016 smi_0298 30103aa012cd460fe2eb2cba21c57156 220 SMART SM00983 149 212 4.8E-17 T 26-04-2016 IPR007373 Thiamin pyrophosphokinase, vitamin B1-binding domain GO:0009229|GO:0030975 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|UniPathway: UPA00060 smi_0298 30103aa012cd460fe2eb2cba21c57156 220 Gene3D G3DSA:2.60.120.320 114 213 8.1E-5 T 26-04-2016 IPR007373 Thiamin pyrophosphokinase, vitamin B1-binding domain GO:0009229|GO:0030975 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|UniPathway: UPA00060 smi_0298 30103aa012cd460fe2eb2cba21c57156 220 Pfam PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain 157 210 1.1E-8 T 26-04-2016 IPR007373 Thiamin pyrophosphokinase, vitamin B1-binding domain GO:0009229|GO:0030975 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|UniPathway: UPA00060 smi_0298 30103aa012cd460fe2eb2cba21c57156 220 TIGRFAM TIGR01378 thi_PPkinase: thiamine pyrophosphokinase 26 213 6.7E-51 T 26-04-2016 IPR006282 Thiamin pyrophosphokinase GO:0004788|GO:0006772 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|UniPathway: UPA00060 smi_0298 30103aa012cd460fe2eb2cba21c57156 220 PANTHER PTHR41299 9 220 1.8E-65 T 26-04-2016 smi_1597 d1534865c039b3aa05f06fd4c7c176c9 205 Gene3D G3DSA:2.160.10.10 62 196 9.4E-30 T 26-04-2016 smi_1597 d1534865c039b3aa05f06fd4c7c176c9 205 PIRSF PIRSF000441 2 200 1.3E-69 T 26-04-2016 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|UniPathway: UPA00136 smi_1597 d1534865c039b3aa05f06fd4c7c176c9 205 PANTHER PTHR23416 5 175 4.9E-81 T 26-04-2016 smi_1597 d1534865c039b3aa05f06fd4c7c176c9 205 SUPERFAMILY SSF51161 4 174 7.49E-51 T 26-04-2016 IPR011004 Trimeric LpxA-like smi_1597 d1534865c039b3aa05f06fd4c7c176c9 205 Gene3D G3DSA:1.10.3130.10 4 61 1.8E-23 T 26-04-2016 smi_1597 d1534865c039b3aa05f06fd4c7c176c9 205 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 117 149 2.9E-5 T 26-04-2016 IPR001451 Hexapeptide repeat smi_1597 d1534865c039b3aa05f06fd4c7c176c9 205 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 6 165 3.9E-69 T 26-04-2016 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|UniPathway: UPA00136 smi_1597 d1534865c039b3aa05f06fd4c7c176c9 205 PANTHER PTHR23416:SF55 5 175 4.9E-81 T 26-04-2016 smi_0624 7ba52d4abb423d54bebce20e5dbf1fcd 87 Pfam PF02325 YGGT family 11 76 4.5E-14 T 26-04-2016 IPR003425 CCB3/YggT GO:0016020 smi_0624 7ba52d4abb423d54bebce20e5dbf1fcd 87 PANTHER PTHR33219 1 86 3.4E-15 T 26-04-2016 smi_1808 82f41401757eb0d5b99a29455358ca6e 167 PANTHER PTHR12029 4 165 1.2E-72 T 26-04-2016 smi_1808 82f41401757eb0d5b99a29455358ca6e 167 PIRSF PIRSF029256 2 156 3.1E-60 T 26-04-2016 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 smi_1808 82f41401757eb0d5b99a29455358ca6e 167 Pfam PF00588 SpoU rRNA Methylase family 4 144 9.5E-34 T 26-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 smi_1808 82f41401757eb0d5b99a29455358ca6e 167 Gene3D G3DSA:3.40.1280.10 3 164 1.9E-61 T 26-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal smi_1808 82f41401757eb0d5b99a29455358ca6e 167 SUPERFAMILY SSF75217 4 154 4.58E-39 T 26-04-2016 IPR029028 Alpha/beta knot methyltransferases smi_1808 82f41401757eb0d5b99a29455358ca6e 167 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 3 153 34.452 T 26-04-2016 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 smi_1808 82f41401757eb0d5b99a29455358ca6e 167 PANTHER PTHR12029:SF31 4 165 1.2E-72 T 26-04-2016 smi_0831 0f763611e981ca646c34497d683031c0 112 PANTHER PTHR21075 1 95 3.3E-16 T 26-04-2016 smi_0831 0f763611e981ca646c34497d683031c0 112 Pfam PF03477 ATP cone domain 1 92 4.9E-19 T 26-04-2016 IPR005144 ATP-cone domain smi_0031 b8ce5e96aa00f1ed50c0e2c8e7f547e7 271 Pfam PF13367 Protease prsW family 66 250 6.8E-26 T 26-04-2016 IPR026898 Protease PrsW GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- smi_1002 808267d819de6406509a7b6243a7b087 4138 TIGRFAM TIGR01168 YSIRK_signal: gram-positive signal peptide, YSIRK family 19 48 1.5E-8 T 26-04-2016 IPR005877 YSIRK Gram-positive signal peptide GO:0016020 smi_1002 808267d819de6406509a7b6243a7b087 4138 Pfam PF00746 Gram positive anchor 4100 4132 8.1E-5 T 26-04-2016 IPR019948 Gram-positive anchor smi_1002 808267d819de6406509a7b6243a7b087 4138 Pfam PF04650 YSIRK type signal peptide 19 41 2.4E-8 T 26-04-2016 IPR005877 YSIRK Gram-positive signal peptide GO:0016020 smi_1002 808267d819de6406509a7b6243a7b087 4138 TIGRFAM TIGR01167 LPXTG_anchor: LPXTG cell wall anchor domain 4102 4135 2.3E-6 T 26-04-2016 IPR019931 LPXTG cell wall anchor domain smi_1947 dfe0599b03bfc8b2d27273da3bb2afc5 107 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 7 104 8.8E-20 T 26-04-2016 IPR008407 Branched-chain amino acid transport, AzlD smi_1795 d76012784afc2cb899c60a4c90b6665d 406 SUPERFAMILY SSF56349 94 387 5.0E-34 T 26-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 smi_1795 d76012784afc2cb899c60a4c90b6665d 406 PANTHER PTHR30349 150 385 1.3E-19 T 26-04-2016 smi_1795 d76012784afc2cb899c60a4c90b6665d 406 Gene3D G3DSA:1.10.150.130 96 177 1.2E-4 T 26-04-2016 IPR023109 Integrase/recombinase, N-terminal smi_1795 d76012784afc2cb899c60a4c90b6665d 406 Pfam PF00589 Phage integrase family 210 387 4.2E-15 T 26-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 smi_1795 d76012784afc2cb899c60a4c90b6665d 406 Gene3D G3DSA:1.10.443.10 195 388 2.3E-27 T 26-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 smi_1667 d7c01ebd09309f6156fe2b6a6d26c61b 481 PANTHER PTHR11659:SF0 2 479 5.1E-247 T 26-04-2016 smi_1667 d7c01ebd09309f6156fe2b6a6d26c61b 481 ProSitePatterns PS01234 Glutamyl-tRNA(Gln) amidotransferase subunit B signature. 143 157 - T 26-04-2016 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site GO:0016884 smi_1667 d7c01ebd09309f6156fe2b6a6d26c61b 481 SUPERFAMILY SSF89095 296 400 2.75E-33 T 26-04-2016 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related GO:0016884 smi_1667 d7c01ebd09309f6156fe2b6a6d26c61b 481 Pfam PF02934 GatB/GatE catalytic domain 5 288 2.7E-109 T 26-04-2016 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic GO:0016874 smi_1667 d7c01ebd09309f6156fe2b6a6d26c61b 481 Pfam PF02637 GatB domain 327 474 3.3E-46 T 26-04-2016 IPR018027 Asn/Gln amidotransferase GO:0016884 smi_1667 d7c01ebd09309f6156fe2b6a6d26c61b 481 Hamap MF_00121 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B [gatB]. 2 475 37.114 T 26-04-2016 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 smi_1667 d7c01ebd09309f6156fe2b6a6d26c61b 481 PANTHER PTHR11659 2 479 5.1E-247 T 26-04-2016 IPR017959 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit B /E GO:0016884 smi_1667 d7c01ebd09309f6156fe2b6a6d26c61b 481 SUPERFAMILY SSF55931 4 295 2.88E-118 T 26-04-2016 smi_1667 d7c01ebd09309f6156fe2b6a6d26c61b 481 TIGRFAM TIGR00133 gatB: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit 1 474 2.2E-165 T 26-04-2016 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 smi_1667 d7c01ebd09309f6156fe2b6a6d26c61b 481 SMART SM00845 327 474 4.6E-61 T 26-04-2016 IPR018027 Asn/Gln amidotransferase GO:0016884 smi_0308 f35fa62809e39c2c2480aa3cd1c53e30 228 SUPERFAMILY SSF46894 126 221 1.05E-18 T 26-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 smi_0308 f35fa62809e39c2c2480aa3cd1c53e30 228 Gene3D G3DSA:3.40.50.2300 2 124 4.7E-33 T 26-04-2016 smi_0308 f35fa62809e39c2c2480aa3cd1c53e30 228 Pfam PF00486 Transcriptional regulatory protein, C terminal 147 219 3.2E-15 T 26-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 smi_0308 f35fa62809e39c2c2480aa3cd1c53e30 228 SMART SM00448 3 111 3.2E-35 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 smi_0308 f35fa62809e39c2c2480aa3cd1c53e30 228 PANTHER PTHR26402:SF50 3 222 1.0E-61 T 26-04-2016 smi_0308 f35fa62809e39c2c2480aa3cd1c53e30 228 Pfam PF00072 Response regulator receiver domain 5 112 3.3E-23 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 smi_0308 f35fa62809e39c2c2480aa3cd1c53e30 228 SUPERFAMILY SSF52172 3 132 5.12E-36 T 26-04-2016 IPR011006 CheY-like superfamily smi_0308 f35fa62809e39c2c2480aa3cd1c53e30 228 SMART SM00862 146 220 6.8E-13 T 26-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 smi_0308 f35fa62809e39c2c2480aa3cd1c53e30 228 PANTHER PTHR26402 3 222 1.0E-61 T 26-04-2016 smi_0308 f35fa62809e39c2c2480aa3cd1c53e30 228 Gene3D G3DSA:1.10.10.10 126 222 2.6E-20 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain smi_1536 2a485096104d1598ace1b464201dd247 400 PANTHER PTHR33055:SF3 209 393 3.6E-45 T 26-04-2016 smi_1536 2a485096104d1598ace1b464201dd247 400 PANTHER PTHR33055:SF3 1 156 3.6E-45 T 26-04-2016 smi_1536 2a485096104d1598ace1b464201dd247 400 PANTHER PTHR33055 209 393 3.6E-45 T 26-04-2016 smi_1536 2a485096104d1598ace1b464201dd247 400 PANTHER PTHR33055 1 156 3.6E-45 T 26-04-2016 smi_1536 2a485096104d1598ace1b464201dd247 400 Pfam PF02371 Transposase IS116/IS110/IS902 family 267 355 6.5E-22 T 26-04-2016 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 smi_1536 2a485096104d1598ace1b464201dd247 400 Pfam PF01548 Transposase 6 155 1.1E-31 T 26-04-2016 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 smi_0329 177953255f852b07888e425e14d2c47c 267 PANTHER PTHR24220:SF534 6 252 1.5E-109 T 26-04-2016 smi_0329 177953255f852b07888e425e14d2c47c 267 SUPERFAMILY SSF52540 3 237 1.78E-53 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0329 177953255f852b07888e425e14d2c47c 267 Pfam PF00005 ABC transporter 25 180 2.6E-28 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 smi_0329 177953255f852b07888e425e14d2c47c 267 SMART SM00382 34 236 2.9E-9 T 26-04-2016 IPR003593 AAA+ ATPase domain smi_0329 177953255f852b07888e425e14d2c47c 267 Gene3D G3DSA:3.40.50.300 3 238 2.9E-57 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0329 177953255f852b07888e425e14d2c47c 267 ProSitePatterns PS00211 ABC transporters family signature. 152 166 - T 26-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 smi_0329 177953255f852b07888e425e14d2c47c 267 PANTHER PTHR24220 6 252 1.5E-109 T 26-04-2016 smi_2053 e3ad7d21d8af863df8e31263f5547836 450 SUPERFAMILY SSF52540 183 437 9.41E-49 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_2053 e3ad7d21d8af863df8e31263f5547836 450 Gene3D G3DSA:3.40.50.300 172 446 1.9E-102 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_2053 e3ad7d21d8af863df8e31263f5547836 450 Pfam PF03796 DnaB-like helicase C terminal domain 185 443 1.7E-108 T 26-04-2016 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 smi_2053 e3ad7d21d8af863df8e31263f5547836 450 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 10 445 1.6E-166 T 26-04-2016 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 smi_2053 e3ad7d21d8af863df8e31263f5547836 450 Gene3D G3DSA:1.10.860.10 10 112 2.4E-33 T 26-04-2016 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal smi_2053 e3ad7d21d8af863df8e31263f5547836 450 SUPERFAMILY SSF48024 8 119 1.1E-34 T 26-04-2016 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 smi_2053 e3ad7d21d8af863df8e31263f5547836 450 PANTHER PTHR30153 1 445 7.1E-192 T 26-04-2016 smi_2053 e3ad7d21d8af863df8e31263f5547836 450 Pfam PF00772 DnaB-like helicase N terminal domain 10 111 3.3E-31 T 26-04-2016 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 smi_0352 c97b0ebd89904d9c285ec25bab8dfb31 169 Pfam PF11193 Protein of unknown function (DUF2812) 14 121 1.4E-15 T 26-04-2016 IPR021359 Protein of unknown function DUF2812 smi_0352 c97b0ebd89904d9c285ec25bab8dfb31 169 PANTHER PTHR41258 2 167 2.9E-47 T 26-04-2016 smi_0665 a2e014e63443b74bea8ebfae07c00c56 265 PANTHER PTHR13799:SF13 1 265 4.6E-87 T 26-04-2016 smi_0665 a2e014e63443b74bea8ebfae07c00c56 265 SUPERFAMILY SSF102705 1 264 3.66E-87 T 26-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 smi_0665 a2e014e63443b74bea8ebfae07c00c56 265 PANTHER PTHR13799 1 265 4.6E-87 T 26-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 smi_0665 a2e014e63443b74bea8ebfae07c00c56 265 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 5 242 8.1E-75 T 26-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 smi_0665 a2e014e63443b74bea8ebfae07c00c56 265 Gene3D G3DSA:3.40.1390.30 1 113 2.0E-45 T 26-04-2016 smi_0665 a2e014e63443b74bea8ebfae07c00c56 265 Gene3D G3DSA:3.40.1390.30 114 224 1.4E-44 T 26-04-2016 smi_0665 a2e014e63443b74bea8ebfae07c00c56 265 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 2 243 4.0E-60 T 26-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 smi_0967 f77b8cf949acf48503ebcf014f66bd66 551 Gene3D G3DSA:3.40.970.40 238 274 9.4E-15 T 26-04-2016 smi_0967 f77b8cf949acf48503ebcf014f66bd66 551 Pfam PF05833 Fibronectin-binding protein A N-terminus (FbpA) 4 427 1.0E-149 T 26-04-2016 smi_0967 f77b8cf949acf48503ebcf014f66bd66 551 PANTHER PTHR15239 1 386 3.5E-136 T 26-04-2016 smi_0967 f77b8cf949acf48503ebcf014f66bd66 551 PANTHER PTHR15239 403 541 3.5E-136 T 26-04-2016 smi_0967 f77b8cf949acf48503ebcf014f66bd66 551 Pfam PF05670 Domain of unknown function (DUF814) 434 519 2.6E-25 T 26-04-2016 IPR008532 Domain of unknown function DUF814 smi_0967 f77b8cf949acf48503ebcf014f66bd66 551 Gene3D G3DSA:2.30.310.10 1 167 3.3E-63 T 26-04-2016 smi_1273 c316964c07aadd9dd5f8283b4aab4e08 119 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 5 103 2.6E-7 T 26-04-2016 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family smi_0236 056c7b4ac2605cf0e982876d965f705c 50 PANTHER PTHR15238 4 50 2.2E-24 T 26-04-2016 smi_0236 056c7b4ac2605cf0e982876d965f705c 50 SUPERFAMILY SSF57829 4 50 6.1E-13 T 26-04-2016 IPR011332 Zinc-binding ribosomal protein GO:0006412 smi_0236 056c7b4ac2605cf0e982876d965f705c 50 PANTHER PTHR15238:SF9 4 50 2.2E-24 T 26-04-2016 smi_0236 056c7b4ac2605cf0e982876d965f705c 50 Pfam PF00471 Ribosomal protein L33 5 50 2.2E-14 T 26-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_0236 056c7b4ac2605cf0e982876d965f705c 50 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 1 50 2.2E-10 T 26-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_0236 056c7b4ac2605cf0e982876d965f705c 50 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 2 50 13.842 T 26-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_1050 2849230f6bf8f98d9336abd2f828d545 176 TIGRFAM TIGR02366 DHAK_reg: probable dihydroxyacetone kinase regulator 4 159 2.5E-56 T 26-04-2016 IPR012738 Transcription regulator DhaS smi_1050 2849230f6bf8f98d9336abd2f828d545 176 PANTHER PTHR30328 7 148 1.3E-16 T 26-04-2016 smi_1050 2849230f6bf8f98d9336abd2f828d545 176 SUPERFAMILY SSF46689 4 66 2.79E-15 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 smi_1050 2849230f6bf8f98d9336abd2f828d545 176 PANTHER PTHR30328:SF20 7 148 1.3E-16 T 26-04-2016 smi_1050 2849230f6bf8f98d9336abd2f828d545 176 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 55 2.1E-6 T 26-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 smi_1050 2849230f6bf8f98d9336abd2f828d545 176 Gene3D G3DSA:1.10.357.10 7 161 3.6E-15 T 26-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 smi_1278 44e3ddeaf108628555d173cbbadf56b5 290 PANTHER PTHR39192 1 290 1.8E-95 T 26-04-2016 smi_1278 44e3ddeaf108628555d173cbbadf56b5 290 Pfam PF09375 Imelysin 48 283 5.7E-40 T 26-04-2016 smi_1633 5b385b93d3bb8c847e02c1b17ddbb40f 248 PANTHER PTHR10108:SF872 195 246 1.4E-49 T 26-04-2016 smi_1633 5b385b93d3bb8c847e02c1b17ddbb40f 248 PANTHER PTHR10108:SF872 1 169 1.4E-49 T 26-04-2016 smi_1633 5b385b93d3bb8c847e02c1b17ddbb40f 248 Gene3D G3DSA:3.40.50.150 3 248 2.3E-44 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase smi_1633 5b385b93d3bb8c847e02c1b17ddbb40f 248 Pfam PF13649 Methyltransferase domain 43 137 1.8E-16 T 26-04-2016 smi_1633 5b385b93d3bb8c847e02c1b17ddbb40f 248 SUPERFAMILY SSF53335 6 248 2.28E-48 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase smi_1633 5b385b93d3bb8c847e02c1b17ddbb40f 248 PANTHER PTHR10108 195 246 1.4E-49 T 26-04-2016 smi_1633 5b385b93d3bb8c847e02c1b17ddbb40f 248 PANTHER PTHR10108 1 169 1.4E-49 T 26-04-2016 smi_0233 36d7f7a7733fabaf0521eac218c75b5b 291 Pfam PF00849 RNA pseudouridylate synthase 89 236 9.5E-36 T 26-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 smi_0233 36d7f7a7733fabaf0521eac218c75b5b 291 SUPERFAMILY SSF55120 82 278 3.68E-61 T 26-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 smi_0233 36d7f7a7733fabaf0521eac218c75b5b 291 PANTHER PTHR11079 39 278 2.1E-59 T 26-04-2016 smi_0233 36d7f7a7733fabaf0521eac218c75b5b 291 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 126 140 - T 26-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 smi_0233 36d7f7a7733fabaf0521eac218c75b5b 291 PANTHER PTHR11079:SF73 39 278 2.1E-59 T 26-04-2016 smi_0233 36d7f7a7733fabaf0521eac218c75b5b 291 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 34 279 8.9E-59 T 26-04-2016 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 smi_0679 125f2986bdbe7646d6b57b140c3fa6b3 360 Pfam PF00557 Metallopeptidase family M24 142 343 1.8E-59 T 26-04-2016 IPR000994 Peptidase M24, structural domain smi_0679 125f2986bdbe7646d6b57b140c3fa6b3 360 Gene3D G3DSA:3.90.230.10 134 356 2.5E-79 T 26-04-2016 IPR000994 Peptidase M24, structural domain smi_0679 125f2986bdbe7646d6b57b140c3fa6b3 360 Gene3D G3DSA:3.40.350.10 3 132 6.1E-31 T 26-04-2016 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal smi_0679 125f2986bdbe7646d6b57b140c3fa6b3 360 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 289 301 - T 26-04-2016 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site smi_0679 125f2986bdbe7646d6b57b140c3fa6b3 360 PRINTS PR00599 Methionine aminopeptidase-1 signature 213 229 4.4E-5 T 26-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase smi_0679 125f2986bdbe7646d6b57b140c3fa6b3 360 PRINTS PR00599 Methionine aminopeptidase-1 signature 311 323 4.4E-5 T 26-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase smi_0679 125f2986bdbe7646d6b57b140c3fa6b3 360 PRINTS PR00599 Methionine aminopeptidase-1 signature 191 204 4.4E-5 T 26-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase smi_0679 125f2986bdbe7646d6b57b140c3fa6b3 360 Pfam PF01321 Creatinase/Prolidase N-terminal domain 4 134 1.5E-22 T 26-04-2016 IPR000587 Creatinase, N-terminal GO:0016787 smi_0679 125f2986bdbe7646d6b57b140c3fa6b3 360 PANTHER PTHR10804:SF106 1 360 9.0E-208 T 26-04-2016 smi_0679 125f2986bdbe7646d6b57b140c3fa6b3 360 SUPERFAMILY SSF53092 2 132 4.53E-28 T 26-04-2016 IPR028980 Creatinase/Aminopeptidase P, N-terminal smi_0679 125f2986bdbe7646d6b57b140c3fa6b3 360 SUPERFAMILY SSF55920 133 357 2.75E-76 T 26-04-2016 IPR000994 Peptidase M24, structural domain smi_0679 125f2986bdbe7646d6b57b140c3fa6b3 360 PANTHER PTHR10804 1 360 9.0E-208 T 26-04-2016 smi_1783 ede0e42b30d17b59f99cc44f98f55bfc 109 PANTHER PTHR33204 1 108 1.4E-30 T 26-04-2016 smi_1783 ede0e42b30d17b59f99cc44f98f55bfc 109 Gene3D G3DSA:1.10.10.10 5 108 1.1E-29 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain smi_1783 ede0e42b30d17b59f99cc44f98f55bfc 109 Pfam PF01638 HxlR-like helix-turn-helix 22 108 2.0E-20 T 26-04-2016 IPR002577 Helix-turn-helix, HxlR type smi_1783 ede0e42b30d17b59f99cc44f98f55bfc 109 SUPERFAMILY SSF46785 9 107 5.84E-24 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain smi_0840 301fc090e001ac479862a4875d7c71d5 233 SUPERFAMILY SSF52540 4 225 1.05E-75 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0840 301fc090e001ac479862a4875d7c71d5 233 Gene3D G3DSA:3.40.50.300 2 223 8.6E-73 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0840 301fc090e001ac479862a4875d7c71d5 233 PANTHER PTHR24220 6 224 2.0E-117 T 26-04-2016 smi_0840 301fc090e001ac479862a4875d7c71d5 233 Pfam PF00005 ABC transporter 24 172 9.1E-35 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 smi_0840 301fc090e001ac479862a4875d7c71d5 233 PANTHER PTHR24220:SF578 6 224 2.0E-117 T 26-04-2016 smi_0840 301fc090e001ac479862a4875d7c71d5 233 SMART SM00382 33 220 4.9E-17 T 26-04-2016 IPR003593 AAA+ ATPase domain smi_0840 301fc090e001ac479862a4875d7c71d5 233 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 26-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 smi_1135 f8aed745f125eea19d4b3f0e423b7d8d 169 PANTHER PTHR40044 1 169 1.2E-54 T 26-04-2016 smi_1135 f8aed745f125eea19d4b3f0e423b7d8d 169 PANTHER PTHR40044:SF1 1 169 1.2E-54 T 26-04-2016 smi_1135 f8aed745f125eea19d4b3f0e423b7d8d 169 PIRSF PIRSF031501 1 169 4.0E-63 T 26-04-2016 IPR010387 Queuosine precursor transporter QueT GO:0005886 smi_1135 f8aed745f125eea19d4b3f0e423b7d8d 169 Pfam PF06177 QueT transporter 10 160 6.9E-35 T 26-04-2016 IPR010387 Queuosine precursor transporter QueT GO:0005886 smi_1904 5bbf1f5fd1cff38f4c7d46be684560a6 207 Gene3D G3DSA:3.40.1370.10 58 207 2.0E-60 T 26-04-2016 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 smi_1904 5bbf1f5fd1cff38f4c7d46be684560a6 207 PANTHER PTHR10746 1 206 1.4E-90 T 26-04-2016 IPR013005 50S ribosomal protein uL4 smi_1904 5bbf1f5fd1cff38f4c7d46be684560a6 207 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 9 207 36.089 T 26-04-2016 IPR013005 50S ribosomal protein uL4 smi_1904 5bbf1f5fd1cff38f4c7d46be684560a6 207 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 18 204 5.3E-78 T 26-04-2016 IPR013005 50S ribosomal protein uL4 smi_1904 5bbf1f5fd1cff38f4c7d46be684560a6 207 SUPERFAMILY SSF52166 1 206 1.96E-77 T 26-04-2016 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 smi_1904 5bbf1f5fd1cff38f4c7d46be684560a6 207 Pfam PF00573 Ribosomal protein L4/L1 family 18 204 6.9E-66 T 26-04-2016 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 smi_0931 40221e719fa6cc2d2b08009832a2e029 153 PANTHER PTHR33695 1 151 7.2E-50 T 26-04-2016 smi_0931 40221e719fa6cc2d2b08009832a2e029 153 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 2 152 16.103 T 26-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 smi_0931 40221e719fa6cc2d2b08009832a2e029 153 TIGRFAM TIGR00077 lspA: signal peptidase II 7 148 8.5E-36 T 26-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 smi_0931 40221e719fa6cc2d2b08009832a2e029 153 PANTHER PTHR33695:SF1 1 151 7.2E-50 T 26-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 smi_0931 40221e719fa6cc2d2b08009832a2e029 153 ProSitePatterns PS00855 Signal peptidases II signature. 96 108 - T 26-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 smi_0931 40221e719fa6cc2d2b08009832a2e029 153 Pfam PF01252 Signal peptidase (SPase) II 10 146 1.7E-34 T 26-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 smi_0931 40221e719fa6cc2d2b08009832a2e029 153 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 127 143 1.4E-17 T 26-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 smi_0931 40221e719fa6cc2d2b08009832a2e029 153 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 49 57 1.4E-17 T 26-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 smi_0931 40221e719fa6cc2d2b08009832a2e029 153 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 93 108 1.4E-17 T 26-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 smi_0487 13d4ad231279ddaef99771ef9dfe35eb 286 Pfam PF02631 RecX family 108 226 1.6E-26 T 26-04-2016 IPR003783 Regulatory protein RecX GO:0006282 smi_0487 13d4ad231279ddaef99771ef9dfe35eb 286 Pfam PF02631 RecX family 232 283 3.2E-4 T 26-04-2016 IPR003783 Regulatory protein RecX GO:0006282 smi_0487 13d4ad231279ddaef99771ef9dfe35eb 286 PANTHER PTHR33602:SF1 15 250 5.1E-47 T 26-04-2016 smi_0487 13d4ad231279ddaef99771ef9dfe35eb 286 Hamap MF_01114 Regulatory protein RecX [recX]. 66 231 16.907 T 26-04-2016 IPR003783 Regulatory protein RecX GO:0006282 smi_0487 13d4ad231279ddaef99771ef9dfe35eb 286 Gene3D G3DSA:1.10.10.10 132 177 4.0E-5 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain smi_0487 13d4ad231279ddaef99771ef9dfe35eb 286 PANTHER PTHR33602 15 250 5.1E-47 T 26-04-2016 smi_1481 996242629913d35491d145c288986e6b 573 TIGRFAM TIGR00553 pabB: aminodeoxychorismate synthase, component I 50 368 2.0E-136 T 26-04-2016 IPR005802 Para-aminobenzoate synthase, component I GO:0009396 KEGG: 00790+2.6.1.85|MetaCyc: PWY-6543|UniPathway: UPA00077 smi_1481 996242629913d35491d145c288986e6b 573 Gene3D G3DSA:3.30.470.10 380 441 7.5E-4 T 26-04-2016 smi_1481 996242629913d35491d145c288986e6b 573 Gene3D G3DSA:3.20.10.10 462 565 3.2E-33 T 26-04-2016 smi_1481 996242629913d35491d145c288986e6b 573 Gene3D G3DSA:3.60.120.10 24 369 4.9E-112 T 26-04-2016 IPR005801 ADC synthase GO:0009058 smi_1481 996242629913d35491d145c288986e6b 573 Pfam PF01063 Amino-transferase class IV 377 566 8.7E-32 T 26-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 smi_1481 996242629913d35491d145c288986e6b 573 PANTHER PTHR11236 15 453 6.1E-181 T 26-04-2016 smi_1481 996242629913d35491d145c288986e6b 573 Pfam PF00425 chorismate binding enzyme 111 364 6.8E-88 T 26-04-2016 IPR015890 Chorismate-utilising enzyme, C-terminal smi_1481 996242629913d35491d145c288986e6b 573 SUPERFAMILY SSF56322 30 370 3.27E-108 T 26-04-2016 IPR005801 ADC synthase GO:0009058 smi_1481 996242629913d35491d145c288986e6b 573 PANTHER PTHR11236:SF18 15 453 6.1E-181 T 26-04-2016 smi_1481 996242629913d35491d145c288986e6b 573 SUPERFAMILY SSF56752 320 566 4.84E-39 T 26-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 smi_1481 996242629913d35491d145c288986e6b 573 PRINTS PR00095 Anthranilate synthase component I signature 321 335 6.4E-8 T 26-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 smi_1481 996242629913d35491d145c288986e6b 573 PRINTS PR00095 Anthranilate synthase component I signature 306 320 6.4E-8 T 26-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 smi_1481 996242629913d35491d145c288986e6b 573 PRINTS PR00095 Anthranilate synthase component I signature 226 239 6.4E-8 T 26-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 smi_1481 996242629913d35491d145c288986e6b 573 PRINTS PR00095 Anthranilate synthase component I signature 212 225 6.4E-8 T 26-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 smi_0672 b190101952ba8cfa5e3ecdd4275f236e 225 TIGRFAM TIGR00017 cmk: cytidylate kinase 3 215 1.0E-79 T 26-04-2016 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 smi_0672 b190101952ba8cfa5e3ecdd4275f236e 225 Hamap MF_00238 Cytidylate kinase [cmk]. 4 223 33.956 T 26-04-2016 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 smi_0672 b190101952ba8cfa5e3ecdd4275f236e 225 SUPERFAMILY SSF52540 1 222 8.32E-46 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0672 b190101952ba8cfa5e3ecdd4275f236e 225 Pfam PF02224 Cytidylate kinase 6 220 5.8E-77 T 26-04-2016 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 smi_0672 b190101952ba8cfa5e3ecdd4275f236e 225 PANTHER PTHR21299 6 225 2.9E-75 T 26-04-2016 smi_0672 b190101952ba8cfa5e3ecdd4275f236e 225 Gene3D G3DSA:3.40.50.300 3 218 3.3E-75 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1107 4f268b59989343cf54fb84daab7a0d71 274 Gene3D G3DSA:3.40.50.1820 2 255 1.1E-28 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold smi_1107 4f268b59989343cf54fb84daab7a0d71 274 SUPERFAMILY SSF53474 3 256 4.82E-30 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold smi_1107 4f268b59989343cf54fb84daab7a0d71 274 PANTHER PTHR10992 3 256 3.8E-24 T 26-04-2016 smi_1107 4f268b59989343cf54fb84daab7a0d71 274 Pfam PF12697 Alpha/beta hydrolase family 14 115 6.3E-9 T 26-04-2016 IPR000073 Alpha/beta hydrolase fold-1 smi_0365 9759db66ac726b2e573a892dd7318bcf 245 PANTHER PTHR26402:SF577 1 126 9.8E-63 T 26-04-2016 smi_0365 9759db66ac726b2e573a892dd7318bcf 245 Gene3D G3DSA:2.40.50.40 139 206 1.9E-14 T 26-04-2016 smi_0365 9759db66ac726b2e573a892dd7318bcf 245 Pfam PF00072 Response regulator receiver domain 3 122 9.2E-11 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 smi_0365 9759db66ac726b2e573a892dd7318bcf 245 Pfam PF04397 LytTr DNA-binding domain 151 241 1.5E-17 T 26-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 smi_0365 9759db66ac726b2e573a892dd7318bcf 245 SMART SM00448 1 122 5.4E-13 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 smi_0365 9759db66ac726b2e573a892dd7318bcf 245 Gene3D G3DSA:3.40.50.2300 1 133 3.2E-16 T 26-04-2016 smi_0365 9759db66ac726b2e573a892dd7318bcf 245 SMART SM00850 148 242 3.2E-14 T 26-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 smi_0365 9759db66ac726b2e573a892dd7318bcf 245 PANTHER PTHR26402 1 126 9.8E-63 T 26-04-2016 smi_0365 9759db66ac726b2e573a892dd7318bcf 245 SUPERFAMILY SSF52172 1 126 8.68E-13 T 26-04-2016 IPR011006 CheY-like superfamily smi_1981 e76428488599257eda6732fc1f34c838 210 PANTHER PTHR18901 1 210 1.7E-81 T 26-04-2016 smi_1981 e76428488599257eda6732fc1f34c838 210 PANTHER PTHR18901:SF23 1 210 1.7E-81 T 26-04-2016 smi_1981 e76428488599257eda6732fc1f34c838 210 Gene3D G3DSA:1.10.150.240 18 74 1.9E-26 T 26-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 smi_1981 e76428488599257eda6732fc1f34c838 210 Gene3D G3DSA:3.40.50.1000 75 208 1.5E-44 T 26-04-2016 IPR023214 HAD-like domain smi_1981 e76428488599257eda6732fc1f34c838 210 SUPERFAMILY SSF56784 1 209 1.08E-51 T 26-04-2016 IPR023214 HAD-like domain smi_1981 e76428488599257eda6732fc1f34c838 210 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 180 1.5E-37 T 26-04-2016 IPR023214 HAD-like domain smi_0617 e8ebe4ba2fb1fd6cd046b15df4b4be46 234 TIGRFAM TIGR02206 intg_mem_TP0381: conserved hypothetical integral membrane protein TIGR02206 24 191 1.5E-23 T 26-04-2016 IPR011737 Conserved hypothetical protein CHP02206, TP0381 smi_0617 e8ebe4ba2fb1fd6cd046b15df4b4be46 234 Pfam PF09529 Integral membrane protein (intg_mem_TP0381) 20 207 4.0E-40 T 26-04-2016 IPR011737 Conserved hypothetical protein CHP02206, TP0381 smi_1305 6821d19dbae975a2f1f41057c8787751 187 PANTHER PTHR33498 7 183 2.8E-86 T 26-04-2016 smi_1305 6821d19dbae975a2f1f41057c8787751 187 Pfam PF01610 Transposase 5 169 7.0E-23 T 26-04-2016 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain smi_1305 6821d19dbae975a2f1f41057c8787751 187 PANTHER PTHR33498:SF1 7 183 2.8E-86 T 26-04-2016 smi_1033 b42604cdae0266ffe6db8adb4c4eb09e 304 Pfam PF00892 EamA-like transporter family 10 148 1.7E-15 T 26-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 smi_1033 b42604cdae0266ffe6db8adb4c4eb09e 304 Pfam PF00892 EamA-like transporter family 160 296 2.5E-20 T 26-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 smi_1033 b42604cdae0266ffe6db8adb4c4eb09e 304 PANTHER PTHR32322 1 297 1.7E-41 T 26-04-2016 smi_1033 b42604cdae0266ffe6db8adb4c4eb09e 304 SUPERFAMILY SSF103481 45 150 2.35E-10 T 26-04-2016 smi_1033 b42604cdae0266ffe6db8adb4c4eb09e 304 SUPERFAMILY SSF103481 194 298 4.05E-13 T 26-04-2016 smi_1299 cc0fa785f58574bcc2abeb68ddfac0ad 213 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 8 105 4.2E-30 T 26-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 smi_1299 cc0fa785f58574bcc2abeb68ddfac0ad 213 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 30 208 3.3E-22 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 smi_1299 cc0fa785f58574bcc2abeb68ddfac0ad 213 SUPERFAMILY SSF161098 10 197 2.75E-41 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 smi_1299 cc0fa785f58574bcc2abeb68ddfac0ad 213 PANTHER PTHR30614:SF11 1 213 7.6E-85 T 26-04-2016 smi_1299 cc0fa785f58574bcc2abeb68ddfac0ad 213 PANTHER PTHR30614 1 213 7.6E-85 T 26-04-2016 smi_1299 cc0fa785f58574bcc2abeb68ddfac0ad 213 Gene3D G3DSA:1.10.3720.10 9 209 3.4E-48 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 smi_0315 828de7b41d0d1614d9e699f05274924e 162 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 4 161 31.519 T 26-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 smi_0315 828de7b41d0d1614d9e699f05274924e 162 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 5 65 4.9E-18 T 26-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 smi_0315 828de7b41d0d1614d9e699f05274924e 162 Gene3D G3DSA:3.40.50.620 1 159 2.8E-49 T 26-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold smi_0315 828de7b41d0d1614d9e699f05274924e 162 SUPERFAMILY SSF52374 4 159 1.29E-39 T 26-04-2016 smi_0315 828de7b41d0d1614d9e699f05274924e 162 Pfam PF01467 Cytidylyltransferase-like 7 119 2.5E-16 T 26-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 smi_0315 828de7b41d0d1614d9e699f05274924e 162 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 6 159 2.5E-55 T 26-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 smi_0315 828de7b41d0d1614d9e699f05274924e 162 ProDom PD016147 LIGASE LYASE CITRATE PRO-3S-LYASE SYNTHETASE TRANSFERASE CYTIDYLTRANSFERASE-RELATED:CITRATE ACETATE:SH-CITRATE CITC PLASMID 4 151 9.0E-5 T 26-04-2016 smi_0315 828de7b41d0d1614d9e699f05274924e 162 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 88 104 1.252982E-32 T 26-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 smi_0315 828de7b41d0d1614d9e699f05274924e 162 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 4 22 1.252982E-32 T 26-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 smi_0315 828de7b41d0d1614d9e699f05274924e 162 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 115 137 1.252982E-32 T 26-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 smi_0315 828de7b41d0d1614d9e699f05274924e 162 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 22 43 1.252982E-32 T 26-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 smi_0315 828de7b41d0d1614d9e699f05274924e 162 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 51 75 1.252982E-32 T 26-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 smi_0315 828de7b41d0d1614d9e699f05274924e 162 PANTHER PTHR21342 1 159 6.9E-63 T 26-04-2016 smi_0315 828de7b41d0d1614d9e699f05274924e 162 PANTHER PTHR21342:SF1 1 159 6.9E-63 T 26-04-2016 smi_1205 7b7ae1ba448d61a2b9e78e1e020a2d87 495 PIRSF PIRSF000110 1 484 9.2E-183 T 26-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 smi_1205 7b7ae1ba448d61a2b9e78e1e020a2d87 495 SUPERFAMILY SSF51735 5 189 8.07E-56 T 26-04-2016 IPR016040 NAD(P)-binding domain smi_1205 7b7ae1ba448d61a2b9e78e1e020a2d87 495 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 236 252 4.915915E-45 T 26-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 smi_1205 7b7ae1ba448d61a2b9e78e1e020a2d87 495 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 218 235 4.915915E-45 T 26-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 smi_1205 7b7ae1ba448d61a2b9e78e1e020a2d87 495 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 142 155 4.915915E-45 T 26-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 smi_1205 7b7ae1ba448d61a2b9e78e1e020a2d87 495 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 166 194 4.915915E-45 T 26-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 smi_1205 7b7ae1ba448d61a2b9e78e1e020a2d87 495 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 327 353 4.915915E-45 T 26-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 smi_1205 7b7ae1ba448d61a2b9e78e1e020a2d87 495 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 4 482 85.481 T 26-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 smi_1205 7b7ae1ba448d61a2b9e78e1e020a2d87 495 PANTHER PTHR23429:SF0 1 486 2.4E-199 T 26-04-2016 smi_1205 7b7ae1ba448d61a2b9e78e1e020a2d87 495 Gene3D G3DSA:3.30.360.10 186 481 1.2E-110 T 26-04-2016 smi_1205 7b7ae1ba448d61a2b9e78e1e020a2d87 495 ProSitePatterns PS00069 Glucose-6-phosphate dehydrogenase active site. 176 182 - T 26-04-2016 IPR019796 Glucose-6-phosphate dehydrogenase, active site GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 smi_1205 7b7ae1ba448d61a2b9e78e1e020a2d87 495 Gene3D G3DSA:3.40.50.720 4 185 2.6E-64 T 26-04-2016 IPR016040 NAD(P)-binding domain smi_1205 7b7ae1ba448d61a2b9e78e1e020a2d87 495 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 5 481 1.5E-167 T 26-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 smi_1205 7b7ae1ba448d61a2b9e78e1e020a2d87 495 SUPERFAMILY SSF55347 176 485 6.54E-105 T 26-04-2016 smi_1205 7b7ae1ba448d61a2b9e78e1e020a2d87 495 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 9 185 2.4E-57 T 26-04-2016 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 smi_1205 7b7ae1ba448d61a2b9e78e1e020a2d87 495 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 189 480 1.5E-101 T 26-04-2016 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 smi_1205 7b7ae1ba448d61a2b9e78e1e020a2d87 495 PANTHER PTHR23429 1 486 2.4E-199 T 26-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 smi_1031 f44ed6f66e67fe238cd58b3633c4cea6 142 PANTHER PTHR30345:SF5 1 142 4.7E-42 T 26-04-2016 smi_1031 f44ed6f66e67fe238cd58b3633c4cea6 142 Gene3D G3DSA:3.40.1400.10 1 141 2.0E-35 T 26-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 smi_1031 f44ed6f66e67fe238cd58b3633c4cea6 142 SUPERFAMILY SSF89623 1 141 1.7E-32 T 26-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 smi_1031 f44ed6f66e67fe238cd58b3633c4cea6 142 PANTHER PTHR30345 1 142 4.7E-42 T 26-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 smi_1031 f44ed6f66e67fe238cd58b3633c4cea6 142 Pfam PF02502 Ribose/Galactose Isomerase 3 138 1.1E-30 T 26-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 smi_1031 f44ed6f66e67fe238cd58b3633c4cea6 142 TIGRFAM TIGR00689 rpiB_lacA_lacB: sugar-phosphate isomerase, RpiB/LacA/LacB family 3 139 7.5E-28 T 26-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 smi_1031 f44ed6f66e67fe238cd58b3633c4cea6 142 PIRSF PIRSF005384 1 142 1.8E-33 T 26-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 smi_1014 a1276ccbd7be08fb887e079d3c1545ab 446 PANTHER PTHR30008 1 441 2.8E-168 T 26-04-2016 smi_1014 a1276ccbd7be08fb887e079d3c1545ab 446 Pfam PF13742 OB-fold nucleic acid binding domain 5 97 3.3E-24 T 26-04-2016 IPR025824 OB-fold nucleic acid binding domain GO:0003676 smi_1014 a1276ccbd7be08fb887e079d3c1545ab 446 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 2 439 28.546 T 26-04-2016 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 smi_1014 a1276ccbd7be08fb887e079d3c1545ab 446 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 6 356 2.2E-129 T 26-04-2016 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 smi_1014 a1276ccbd7be08fb887e079d3c1545ab 446 Pfam PF02601 Exonuclease VII, large subunit 122 436 1.5E-96 T 26-04-2016 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 smi_1014 a1276ccbd7be08fb887e079d3c1545ab 446 PANTHER PTHR30008:SF0 1 441 2.8E-168 T 26-04-2016 smi_1063 c1783c5a358b04aa9e353c6aed72a436 283 SUPERFAMILY SSF52540 10 190 1.92E-45 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1063 c1783c5a358b04aa9e353c6aed72a436 283 Gene3D G3DSA:3.40.50.300 16 178 8.4E-38 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1063 c1783c5a358b04aa9e353c6aed72a436 283 PANTHER PTHR11089 4 274 1.0E-68 T 26-04-2016 smi_1063 c1783c5a358b04aa9e353c6aed72a436 283 Gene3D G3DSA:1.10.1580.10 181 268 1.1E-23 T 26-04-2016 IPR023179 GTP-binding protein, orthogonal bundle domain smi_1063 c1783c5a358b04aa9e353c6aed72a436 283 TIGRFAM TIGR03596 GTPase_YlqF: ribosome biogenesis GTP-binding protein YlqF 4 274 1.9E-107 T 26-04-2016 IPR019991 GTP-binding protein, ribosome biogenesis smi_1063 c1783c5a358b04aa9e353c6aed72a436 283 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 124 144 3.6E-5 T 26-04-2016 IPR006073 GTP binding domain GO:0005525 smi_1063 c1783c5a358b04aa9e353c6aed72a436 283 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 170 185 3.6E-5 T 26-04-2016 IPR006073 GTP binding domain GO:0005525 smi_1063 c1783c5a358b04aa9e353c6aed72a436 283 Pfam PF01926 50S ribosome-binding GTPase 124 239 1.2E-15 T 26-04-2016 IPR006073 GTP binding domain GO:0005525 smi_1063 c1783c5a358b04aa9e353c6aed72a436 283 PIRSF PIRSF006230 1 278 4.6E-97 T 26-04-2016 IPR016478 GTPase, MTG1 smi_0205 365990de55cd3c409a32d11731ab5066 313 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 196 210 - T 26-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 smi_0205 365990de55cd3c409a32d11731ab5066 313 SUPERFAMILY SSF52540 3 267 2.37E-49 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0205 365990de55cd3c409a32d11731ab5066 313 PANTHER PTHR30258 1 266 6.6E-75 T 26-04-2016 smi_0205 365990de55cd3c409a32d11731ab5066 313 Gene3D G3DSA:3.40.50.300 129 267 3.5E-48 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0205 365990de55cd3c409a32d11731ab5066 313 Pfam PF00437 Type II/IV secretion system protein 11 264 2.9E-41 T 26-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 smi_0205 365990de55cd3c409a32d11731ab5066 313 SMART SM00382 130 250 6.1E-5 T 26-04-2016 IPR003593 AAA+ ATPase domain smi_0205 365990de55cd3c409a32d11731ab5066 313 Gene3D G3DSA:3.30.450.90 2 108 2.4E-18 T 26-04-2016 smi_0863 2f00a8f97d8165fb6ae38ce40f7c11ff 99 Gene3D G3DSA:3.40.1720.10 1 98 1.8E-45 T 26-04-2016 smi_0863 2f00a8f97d8165fb6ae38ce40f7c11ff 99 Pfam PF08860 Domain of unknown function (DUF1827) 1 97 1.8E-37 T 26-04-2016 IPR014959 Protein of unknown function DUF1827 smi_0668 04c060d285d305e45e4e3e1abad5847e 339 Pfam PF16363 GDP-mannose 4,6 dehydratase 6 325 1.5E-58 T 26-04-2016 IPR016040 NAD(P)-binding domain smi_0668 04c060d285d305e45e4e3e1abad5847e 339 Gene3D G3DSA:3.90.25.10 181 233 8.3E-54 T 26-04-2016 smi_0668 04c060d285d305e45e4e3e1abad5847e 339 Gene3D G3DSA:3.90.25.10 265 338 8.3E-54 T 26-04-2016 smi_0668 04c060d285d305e45e4e3e1abad5847e 339 PANTHER PTHR10366 4 339 4.3E-156 T 26-04-2016 smi_0668 04c060d285d305e45e4e3e1abad5847e 339 PRINTS PR01713 Nucleotide sugar epimerase signature 257 272 3.1E-5 T 26-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 smi_0668 04c060d285d305e45e4e3e1abad5847e 339 PRINTS PR01713 Nucleotide sugar epimerase signature 296 313 3.1E-5 T 26-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 smi_0668 04c060d285d305e45e4e3e1abad5847e 339 PRINTS PR01713 Nucleotide sugar epimerase signature 232 247 3.1E-5 T 26-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 smi_0668 04c060d285d305e45e4e3e1abad5847e 339 Gene3D G3DSA:3.40.50.720 2 180 1.1E-52 T 26-04-2016 IPR016040 NAD(P)-binding domain smi_0668 04c060d285d305e45e4e3e1abad5847e 339 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 4 336 2.1E-141 T 26-04-2016 IPR005886 UDP-glucose 4-epimerase GalE GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|UniPathway: UPA00214 smi_0668 04c060d285d305e45e4e3e1abad5847e 339 SUPERFAMILY SSF51735 1 337 2.8E-97 T 26-04-2016 IPR016040 NAD(P)-binding domain smi_0668 04c060d285d305e45e4e3e1abad5847e 339 PANTHER PTHR10366:SF39 4 339 4.3E-156 T 26-04-2016 smi_1883 7f140c3076ff418deacf593e7d61908c 72 SMART SM00316 4 72 3.2E-4 T 26-04-2016 IPR022967 RNA-binding domain, S1 smi_1883 7f140c3076ff418deacf593e7d61908c 72 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 5.3E-28 T 26-04-2016 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 smi_1883 7f140c3076ff418deacf593e7d61908c 72 PANTHER PTHR33370 2 72 4.0E-45 T 26-04-2016 smi_1883 7f140c3076ff418deacf593e7d61908c 72 Gene3D G3DSA:2.40.50.140 2 72 1.1E-38 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold smi_1883 7f140c3076ff418deacf593e7d61908c 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 70 6.0E-38 T 26-04-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 smi_1883 7f140c3076ff418deacf593e7d61908c 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 26.265 T 26-04-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 smi_1883 7f140c3076ff418deacf593e7d61908c 72 SUPERFAMILY SSF50249 2 71 1.68E-27 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold smi_1553 ef8a9ba0b142ac98c9362ff8d4ae3c00 322 Gene3D G3DSA:3.50.50.60 242 320 2.9E-46 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 smi_1553 ef8a9ba0b142ac98c9362ff8d4ae3c00 322 Gene3D G3DSA:3.50.50.60 3 123 2.9E-46 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 smi_1553 ef8a9ba0b142ac98c9362ff8d4ae3c00 322 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 259 281 1.4E-17 T 26-04-2016 smi_1553 ef8a9ba0b142ac98c9362ff8d4ae3c00 322 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 150 168 1.4E-17 T 26-04-2016 smi_1553 ef8a9ba0b142ac98c9362ff8d4ae3c00 322 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 1.4E-17 T 26-04-2016 smi_1553 ef8a9ba0b142ac98c9362ff8d4ae3c00 322 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 108 126 1.4E-17 T 26-04-2016 smi_1553 ef8a9ba0b142ac98c9362ff8d4ae3c00 322 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 233 249 1.4E-17 T 26-04-2016 smi_1553 ef8a9ba0b142ac98c9362ff8d4ae3c00 322 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 290 3.1E-30 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 smi_1553 ef8a9ba0b142ac98c9362ff8d4ae3c00 322 Gene3D G3DSA:3.50.50.60 128 241 1.7E-15 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 smi_1553 ef8a9ba0b142ac98c9362ff8d4ae3c00 322 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 196 212 1.5E-21 T 26-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 smi_1553 ef8a9ba0b142ac98c9362ff8d4ae3c00 322 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 63 73 1.5E-21 T 26-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 smi_1553 ef8a9ba0b142ac98c9362ff8d4ae3c00 322 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 146 170 1.5E-21 T 26-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 smi_1553 ef8a9ba0b142ac98c9362ff8d4ae3c00 322 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 269 287 1.5E-21 T 26-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 smi_1553 ef8a9ba0b142ac98c9362ff8d4ae3c00 322 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 6 28 1.5E-21 T 26-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 smi_1553 ef8a9ba0b142ac98c9362ff8d4ae3c00 322 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 109 117 1.5E-21 T 26-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 smi_1553 ef8a9ba0b142ac98c9362ff8d4ae3c00 322 PANTHER PTHR22912 1 312 7.2E-155 T 26-04-2016 smi_1553 ef8a9ba0b142ac98c9362ff8d4ae3c00 322 PANTHER PTHR22912:SF158 1 312 7.2E-155 T 26-04-2016 smi_1553 ef8a9ba0b142ac98c9362ff8d4ae3c00 322 Hamap MF_01685 Ferredoxin--NADP reductase. 4 322 41.195 T 26-04-2016 IPR022890 Ferredoxin--NADP reductase, type 2 GO:0004324|GO:0055114 KEGG: 00195+1.18.1.2|MetaCyc: PWY-101|MetaCyc: PWY-7230 smi_1553 ef8a9ba0b142ac98c9362ff8d4ae3c00 322 SUPERFAMILY SSF51905 3 308 4.44E-39 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 smi_1809 a02029037bc44a89ebd9c9af50452f59 276 PANTHER PTHR33514 2 269 1.1E-103 T 26-04-2016 smi_1809 a02029037bc44a89ebd9c9af50452f59 276 Pfam PF02361 Cobalt transport protein 13 232 8.0E-32 T 26-04-2016 IPR003339 ABC/ECF transporter, transmembrane component smi_1809 a02029037bc44a89ebd9c9af50452f59 276 PANTHER PTHR33514:SF1 2 269 1.1E-103 T 26-04-2016 smi_0732 b23c07e5b59768c834b31dd827f763f0 260 PANTHER PTHR30570 1 258 1.4E-143 T 26-04-2016 smi_0732 b23c07e5b59768c834b31dd827f763f0 260 Gene3D G3DSA:3.40.190.10 8 60 4.9E-4 T 26-04-2016 smi_0732 b23c07e5b59768c834b31dd827f763f0 260 SUPERFAMILY SSF53850 2 247 3.92E-71 T 26-04-2016 smi_0732 b23c07e5b59768c834b31dd827f763f0 260 Gene3D G3DSA:3.40.190.10 77 200 1.4E-41 T 26-04-2016 smi_0732 b23c07e5b59768c834b31dd827f763f0 260 TIGRFAM TIGR02136 ptsS_2: phosphate binding protein 2 239 4.9E-87 T 26-04-2016 IPR011862 Phosphate binding protein GO:0006810 smi_0732 b23c07e5b59768c834b31dd827f763f0 260 PANTHER PTHR30570:SF4 1 258 1.4E-143 T 26-04-2016 smi_0732 b23c07e5b59768c834b31dd827f763f0 260 Pfam PF12849 PBP superfamily domain 2 226 9.2E-34 T 26-04-2016 IPR024370 PBP domain smi_1796 a54360cbb06141b0f05b4aa2e85ef349 130 PANTHER PTHR21569 1 130 3.9E-68 T 26-04-2016 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 smi_1796 a54360cbb06141b0f05b4aa2e85ef349 130 Pfam PF00380 Ribosomal protein S9/S16 10 130 6.5E-49 T 26-04-2016 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 smi_1796 a54360cbb06141b0f05b4aa2e85ef349 130 SUPERFAMILY SSF54211 5 130 3.3E-48 T 26-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold smi_1796 a54360cbb06141b0f05b4aa2e85ef349 130 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 1 130 33.434 T 26-04-2016 IPR023035 Ribosomal protein S9, bacterial/plastid smi_1796 a54360cbb06141b0f05b4aa2e85ef349 130 ProSitePatterns PS00360 Ribosomal protein S9 signature. 69 87 - T 26-04-2016 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 smi_1796 a54360cbb06141b0f05b4aa2e85ef349 130 Gene3D G3DSA:3.30.230.10 5 130 3.2E-51 T 26-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup smi_0314 3c6a6ba5b2a555d14e86d9a767eaa1d4 179 Gene3D G3DSA:3.40.50.150 1 179 2.5E-59 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase smi_0314 3c6a6ba5b2a555d14e86d9a767eaa1d4 179 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 2 178 2.8E-51 T 26-04-2016 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 smi_0314 3c6a6ba5b2a555d14e86d9a767eaa1d4 179 PANTHER PTHR18895:SF60 14 179 1.9E-46 T 26-04-2016 smi_0314 3c6a6ba5b2a555d14e86d9a767eaa1d4 179 PANTHER PTHR18895 14 179 1.9E-46 T 26-04-2016 smi_0314 3c6a6ba5b2a555d14e86d9a767eaa1d4 179 PIRSF PIRSF004553 1 179 5.6E-58 T 26-04-2016 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 smi_0314 3c6a6ba5b2a555d14e86d9a767eaa1d4 179 SUPERFAMILY SSF53335 1 178 3.91E-46 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase smi_0314 3c6a6ba5b2a555d14e86d9a767eaa1d4 179 Pfam PF03602 Conserved hypothetical protein 95 1 177 5.8E-64 T 26-04-2016 smi_0314 3c6a6ba5b2a555d14e86d9a767eaa1d4 179 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 114 120 - T 26-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 smi_1945 c238deb2f45ef48449925296fbbaf41c 276 PANTHER PTHR18966:SF208 30 268 6.5E-21 T 26-04-2016 smi_1945 c238deb2f45ef48449925296fbbaf41c 276 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 40 265 6.4E-47 T 26-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF smi_1945 c238deb2f45ef48449925296fbbaf41c 276 Gene3D G3DSA:3.40.190.10 227 268 1.5E-26 T 26-04-2016 smi_1945 c238deb2f45ef48449925296fbbaf41c 276 Gene3D G3DSA:3.40.190.10 37 116 1.5E-26 T 26-04-2016 smi_1945 c238deb2f45ef48449925296fbbaf41c 276 PANTHER PTHR18966 30 268 6.5E-21 T 26-04-2016 smi_1945 c238deb2f45ef48449925296fbbaf41c 276 SUPERFAMILY SSF53850 36 269 2.17E-46 T 26-04-2016 smi_1945 c238deb2f45ef48449925296fbbaf41c 276 SMART SM00062 39 267 3.1E-46 T 26-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF smi_1945 c238deb2f45ef48449925296fbbaf41c 276 Gene3D G3DSA:3.40.190.10 117 226 1.9E-20 T 26-04-2016 smi_0584 556c20ab4a5d044387ba8ee8275eccae 298 Pfam PF07319 Primosomal protein DnaI N-terminus 1 88 1.1E-23 T 26-04-2016 IPR009928 Primosomal DnaI, N-terminal smi_0584 556c20ab4a5d044387ba8ee8275eccae 298 SUPERFAMILY SSF52540 136 265 3.77E-17 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0584 556c20ab4a5d044387ba8ee8275eccae 298 PANTHER PTHR30050:SF8 25 298 1.6E-112 T 26-04-2016 smi_0584 556c20ab4a5d044387ba8ee8275eccae 298 Pfam PF01695 IstB-like ATP binding protein 147 264 1.3E-11 T 26-04-2016 IPR002611 IstB-like ATP-binding protein GO:0005524 smi_0584 556c20ab4a5d044387ba8ee8275eccae 298 PANTHER PTHR30050 25 298 1.6E-112 T 26-04-2016 smi_0584 556c20ab4a5d044387ba8ee8275eccae 298 Gene3D G3DSA:3.40.50.300 99 283 3.7E-35 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0071 e4d2fff86358ecd5fb7a41cfef2a25b7 154 SUPERFAMILY SSF55729 1 143 6.28E-21 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase smi_0071 e4d2fff86358ecd5fb7a41cfef2a25b7 154 Gene3D G3DSA:3.40.630.30 1 152 8.1E-23 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase smi_0071 e4d2fff86358ecd5fb7a41cfef2a25b7 154 Pfam PF00583 Acetyltransferase (GNAT) family 57 133 2.3E-12 T 26-04-2016 IPR000182 GNAT domain GO:0008080 smi_0995 2870b98b0f8e045c1bd8c3fa69f77f38 441 Gene3D G3DSA:3.40.50.2000 187 346 7.1E-27 T 26-04-2016 smi_0995 2870b98b0f8e045c1bd8c3fa69f77f38 441 Pfam PF13439 Glycosyltransferase Family 4 15 182 5.2E-34 T 26-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain smi_0995 2870b98b0f8e045c1bd8c3fa69f77f38 441 PANTHER PTHR12526 1 419 4.1E-109 T 26-04-2016 smi_0995 2870b98b0f8e045c1bd8c3fa69f77f38 441 SUPERFAMILY SSF53756 1 376 3.41E-76 T 26-04-2016 smi_0995 2870b98b0f8e045c1bd8c3fa69f77f38 441 PANTHER PTHR12526:SF363 1 419 4.1E-109 T 26-04-2016 smi_0995 2870b98b0f8e045c1bd8c3fa69f77f38 441 Pfam PF00534 Glycosyl transferases group 1 196 345 1.2E-29 T 26-04-2016 IPR001296 Glycosyl transferase, family 1 smi_0913 73dd8977877d6df3b0625ce136dc099f 551 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 2 350 1.8E-135 T 26-04-2016 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 smi_0913 73dd8977877d6df3b0625ce136dc099f 551 PANTHER PTHR11669 1 503 1.7E-196 T 26-04-2016 smi_0913 73dd8977877d6df3b0625ce136dc099f 551 SUPERFAMILY SSF48019 244 358 2.38E-14 T 26-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 smi_0913 73dd8977877d6df3b0625ce136dc099f 551 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 237 356 2.6E-7 T 26-04-2016 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 smi_0913 73dd8977877d6df3b0625ce136dc099f 551 PANTHER PTHR11669:SF0 1 503 1.7E-196 T 26-04-2016 smi_0913 73dd8977877d6df3b0625ce136dc099f 551 SMART SM00382 36 176 4.2E-6 T 26-04-2016 IPR003593 AAA+ ATPase domain smi_0913 73dd8977877d6df3b0625ce136dc099f 551 Gene3D G3DSA:1.20.272.10 243 355 2.3E-10 T 26-04-2016 smi_0913 73dd8977877d6df3b0625ce136dc099f 551 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 40 58 7.18E-6 T 26-04-2016 IPR001270 ClpA/B family GO:0005524 smi_0913 73dd8977877d6df3b0625ce136dc099f 551 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 123 141 7.18E-6 T 26-04-2016 IPR001270 ClpA/B family GO:0005524 smi_0913 73dd8977877d6df3b0625ce136dc099f 551 Pfam PF13177 DNA polymerase III, delta subunit 19 177 3.6E-43 T 26-04-2016 smi_0913 73dd8977877d6df3b0625ce136dc099f 551 SUPERFAMILY SSF52540 33 223 1.86E-57 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0913 73dd8977877d6df3b0625ce136dc099f 551 Gene3D G3DSA:3.40.50.300 14 165 1.4E-65 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0913 73dd8977877d6df3b0625ce136dc099f 551 Gene3D G3DSA:1.10.8.60 166 242 1.5E-29 T 26-04-2016 smi_2039 e2c7b3db6adb887c4b6bbd7ddade1938 228 Pfam PF06912 Protein of unknown function (DUF1275) 15 211 2.4E-22 T 26-04-2016 IPR010699 Protein of unknown function DUF1275 smi_1417 2f61af37893686b41b89ad217361d3c9 196 SUPERFAMILY SSF52096 8 191 9.36E-68 T 26-04-2016 IPR029045 ClpP/crotonase-like domain smi_1417 2f61af37893686b41b89ad217361d3c9 196 PANTHER PTHR10381:SF22 1 190 1.4E-110 T 26-04-2016 smi_1417 2f61af37893686b41b89ad217361d3c9 196 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 88 99 - T 26-04-2016 IPR018215 ClpP, Ser active site smi_1417 2f61af37893686b41b89ad217361d3c9 196 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 110 123 - T 26-04-2016 IPR033135 ClpP, histidine active site smi_1417 2f61af37893686b41b89ad217361d3c9 196 PANTHER PTHR10381 1 190 1.4E-110 T 26-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA smi_1417 2f61af37893686b41b89ad217361d3c9 196 PRINTS PR00127 Clp protease catalytic subunit P signature 17 32 5.3E-44 T 26-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 smi_1417 2f61af37893686b41b89ad217361d3c9 196 PRINTS PR00127 Clp protease catalytic subunit P signature 168 187 5.3E-44 T 26-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 smi_1417 2f61af37893686b41b89ad217361d3c9 196 PRINTS PR00127 Clp protease catalytic subunit P signature 88 105 5.3E-44 T 26-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 smi_1417 2f61af37893686b41b89ad217361d3c9 196 PRINTS PR00127 Clp protease catalytic subunit P signature 109 128 5.3E-44 T 26-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 smi_1417 2f61af37893686b41b89ad217361d3c9 196 PRINTS PR00127 Clp protease catalytic subunit P signature 57 77 5.3E-44 T 26-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 smi_1417 2f61af37893686b41b89ad217361d3c9 196 Gene3D G3DSA:3.90.226.10 9 193 7.6E-78 T 26-04-2016 IPR029045 ClpP/crotonase-like domain smi_1417 2f61af37893686b41b89ad217361d3c9 196 Pfam PF00574 Clp protease 10 192 1.5E-79 T 26-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA smi_1417 2f61af37893686b41b89ad217361d3c9 196 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 1 193 39.908 T 26-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 smi_0276 fee192992eee6b7c744179d6b737b04d 270 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 237 1.5E-26 T 26-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 smi_0276 fee192992eee6b7c744179d6b737b04d 270 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 265 5.2E-60 T 26-04-2016 IPR023214 HAD-like domain smi_0276 fee192992eee6b7c744179d6b737b04d 270 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 264 1.6E-52 T 26-04-2016 IPR000150 Cof protein GO:0016787 smi_0276 fee192992eee6b7c744179d6b737b04d 270 ProSitePatterns PS01228 Hypothetical cof family signature 1. 5 16 - T 26-04-2016 IPR000150 Cof protein GO:0016787 smi_0276 fee192992eee6b7c744179d6b737b04d 270 PANTHER PTHR10000:SF23 1 270 1.4E-136 T 26-04-2016 smi_0276 fee192992eee6b7c744179d6b737b04d 270 SUPERFAMILY SSF56784 1 269 8.55E-64 T 26-04-2016 IPR023214 HAD-like domain smi_0276 fee192992eee6b7c744179d6b737b04d 270 PANTHER PTHR10000 1 270 1.4E-136 T 26-04-2016 smi_0276 fee192992eee6b7c744179d6b737b04d 270 Gene3D G3DSA:3.40.50.1000 171 270 9.2E-54 T 26-04-2016 IPR023214 HAD-like domain smi_0276 fee192992eee6b7c744179d6b737b04d 270 Gene3D G3DSA:3.40.50.1000 1 73 9.2E-54 T 26-04-2016 IPR023214 HAD-like domain smi_1249 aaaddfdda1b34fc7324240d143a4c409 712 PIRSF PIRSF015855 60 712 2.0E-177 T 26-04-2016 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 smi_1249 aaaddfdda1b34fc7324240d143a4c409 712 Gene3D G3DSA:3.40.50.150 158 202 3.2E-59 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase smi_1249 aaaddfdda1b34fc7324240d143a4c409 712 Gene3D G3DSA:3.40.50.150 238 342 3.2E-59 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase smi_1249 aaaddfdda1b34fc7324240d143a4c409 712 Gene3D G3DSA:3.40.50.150 441 592 3.2E-59 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase smi_1249 aaaddfdda1b34fc7324240d143a4c409 712 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 185 191 - T 26-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 smi_1249 aaaddfdda1b34fc7324240d143a4c409 712 Pfam PF01555 DNA methylase 182 539 2.5E-37 T 26-04-2016 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 smi_1249 aaaddfdda1b34fc7324240d143a4c409 712 PANTHER PTHR13370 455 568 6.9E-15 T 26-04-2016 smi_1249 aaaddfdda1b34fc7324240d143a4c409 712 PANTHER PTHR13370 232 389 6.9E-15 T 26-04-2016 smi_1249 aaaddfdda1b34fc7324240d143a4c409 712 PANTHER PTHR13370 156 191 6.9E-15 T 26-04-2016 smi_1249 aaaddfdda1b34fc7324240d143a4c409 712 PANTHER PTHR13370:SF7 455 568 6.9E-15 T 26-04-2016 smi_1249 aaaddfdda1b34fc7324240d143a4c409 712 PANTHER PTHR13370:SF7 232 389 6.9E-15 T 26-04-2016 smi_1249 aaaddfdda1b34fc7324240d143a4c409 712 PANTHER PTHR13370:SF7 156 191 6.9E-15 T 26-04-2016 smi_1249 aaaddfdda1b34fc7324240d143a4c409 712 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 248 267 1.3E-12 T 26-04-2016 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 smi_1249 aaaddfdda1b34fc7324240d143a4c409 712 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 501 515 1.3E-12 T 26-04-2016 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 smi_1249 aaaddfdda1b34fc7324240d143a4c409 712 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 182 194 1.3E-12 T 26-04-2016 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 smi_1249 aaaddfdda1b34fc7324240d143a4c409 712 SUPERFAMILY SSF53335 150 201 3.05E-56 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase smi_1249 aaaddfdda1b34fc7324240d143a4c409 712 SUPERFAMILY SSF53335 457 548 3.05E-56 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase smi_1249 aaaddfdda1b34fc7324240d143a4c409 712 SUPERFAMILY SSF53335 236 386 3.05E-56 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase smi_0285 9bc60878dde5b04b32f39e2b8beb9b14 320 Gene3D G3DSA:3.40.50.1170 3 194 5.0E-61 T 26-04-2016 IPR027474 L-asparaginase, N-terminal smi_0285 9bc60878dde5b04b32f39e2b8beb9b14 320 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 7 15 - T 26-04-2016 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 smi_0285 9bc60878dde5b04b32f39e2b8beb9b14 320 PIRSF PIRSF500176 1 320 5.1E-97 T 26-04-2016 smi_0285 9bc60878dde5b04b32f39e2b8beb9b14 320 Gene3D G3DSA:3.40.50.40 204 319 7.2E-32 T 26-04-2016 IPR027473 L-asparaginase, C-terminal domain smi_0285 9bc60878dde5b04b32f39e2b8beb9b14 320 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 78 88 - T 26-04-2016 IPR027475 Asparaginase/glutaminase, active site 2 smi_0285 9bc60878dde5b04b32f39e2b8beb9b14 320 Pfam PF00710 Asparaginase, N-terminal 4 188 7.0E-58 T 26-04-2016 IPR027474 L-asparaginase, N-terminal smi_0285 9bc60878dde5b04b32f39e2b8beb9b14 320 SUPERFAMILY SSF53774 3 319 4.97E-97 T 26-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 smi_0285 9bc60878dde5b04b32f39e2b8beb9b14 320 PANTHER PTHR11707 5 319 2.6E-62 T 26-04-2016 smi_0285 9bc60878dde5b04b32f39e2b8beb9b14 320 SMART SM00870 4 315 2.4E-135 T 26-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 smi_0285 9bc60878dde5b04b32f39e2b8beb9b14 320 PIRSF PIRSF001220 1 319 1.2E-95 T 26-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 smi_0285 9bc60878dde5b04b32f39e2b8beb9b14 320 PRINTS PR00139 Asparaginase/glutaminase family signature 5 16 3.8E-17 T 26-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 smi_0285 9bc60878dde5b04b32f39e2b8beb9b14 320 PRINTS PR00139 Asparaginase/glutaminase family signature 77 95 3.8E-17 T 26-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 smi_0285 9bc60878dde5b04b32f39e2b8beb9b14 320 PRINTS PR00139 Asparaginase/glutaminase family signature 250 268 3.8E-17 T 26-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 smi_0452 86174e0c1363f8a3b14710b8584489c8 304 ProDom PD566665 CAPSID GP34 MAIN MAJOR LJ928 STRUCTURAL PROPHAGE GP34-LIKE LIN2390 DIRECT 31 298 2.0E-64 T 26-04-2016 smi_1361 3410a1a22e88e3bdbc8f59dc970a7bdf 607 Pfam PF05598 Transposase domain (DUF772) 49 109 1.1E-9 T 26-04-2016 IPR008490 Transposase InsH, N-terminal smi_1361 3410a1a22e88e3bdbc8f59dc970a7bdf 607 PANTHER PTHR33408:SF1 1 516 1.1E-106 T 26-04-2016 smi_1361 3410a1a22e88e3bdbc8f59dc970a7bdf 607 Pfam PF01609 Transposase DDE domain 266 513 2.3E-26 T 26-04-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 smi_1361 3410a1a22e88e3bdbc8f59dc970a7bdf 607 PANTHER PTHR33408 1 516 1.1E-106 T 26-04-2016 smi_0532 a2d23d9d586ab62c55bf645259d0b009 95 Gene3D G3DSA:1.10.10.10 3 85 1.4E-26 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain smi_0532 a2d23d9d586ab62c55bf645259d0b009 95 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 39 54 2.2E-10 T 26-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 smi_0532 a2d23d9d586ab62c55bf645259d0b009 95 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 7 22 2.2E-10 T 26-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 smi_0532 a2d23d9d586ab62c55bf645259d0b009 95 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 54 69 2.2E-10 T 26-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 smi_0532 a2d23d9d586ab62c55bf645259d0b009 95 SMART SM00418 5 83 1.5E-19 T 26-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 smi_0532 a2d23d9d586ab62c55bf645259d0b009 95 Pfam PF12840 Helix-turn-helix domain 7 60 2.8E-13 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain smi_0532 a2d23d9d586ab62c55bf645259d0b009 95 PANTHER PTHR33154 7 95 9.2E-22 T 26-04-2016 smi_0532 a2d23d9d586ab62c55bf645259d0b009 95 SUPERFAMILY SSF46785 2 87 1.11E-22 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain smi_1861 251986a42ea641ee517919d396b3949a 30 Pfam PF13955 Toxin Fst, type I toxin-antitoxin system 7 26 2.7E-11 T 26-04-2016 IPR025882 Toxin Fst smi_1898 9adbf26b581e6bd247d38609462060a3 137 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 59 70 - T 26-04-2016 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_1898 9adbf26b581e6bd247d38609462060a3 137 PRINTS PR00060 Ribosomal protein L16 signature 24 36 1.7E-37 T 26-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 smi_1898 9adbf26b581e6bd247d38609462060a3 137 PRINTS PR00060 Ribosomal protein L16 signature 42 53 1.7E-37 T 26-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 smi_1898 9adbf26b581e6bd247d38609462060a3 137 PRINTS PR00060 Ribosomal protein L16 signature 88 117 1.7E-37 T 26-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 smi_1898 9adbf26b581e6bd247d38609462060a3 137 PRINTS PR00060 Ribosomal protein L16 signature 58 87 1.7E-37 T 26-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 smi_1898 9adbf26b581e6bd247d38609462060a3 137 PANTHER PTHR12220 1 135 1.1E-70 T 26-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 smi_1898 9adbf26b581e6bd247d38609462060a3 137 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 127 3.5E-57 T 26-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 smi_1898 9adbf26b581e6bd247d38609462060a3 137 SUPERFAMILY SSF54686 1 135 2.49E-55 T 26-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 smi_1898 9adbf26b581e6bd247d38609462060a3 137 Gene3D G3DSA:3.90.1170.10 23 135 9.3E-54 T 26-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 smi_1898 9adbf26b581e6bd247d38609462060a3 137 ProSitePatterns PS00701 Ribosomal protein L16 signature 2. 82 93 - T 26-04-2016 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_1898 9adbf26b581e6bd247d38609462060a3 137 Pfam PF00252 Ribosomal protein L16p/L10e 4 132 4.4E-49 T 26-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 smi_1898 9adbf26b581e6bd247d38609462060a3 137 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 134 38.265 T 26-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 smi_1095 92a1a81ee1204454f6c09b7c28685b3f 603 SUPERFAMILY SSF52540 15 333 6.85E-16 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1095 92a1a81ee1204454f6c09b7c28685b3f 603 Pfam PF07693 KAP family P-loop domain 23 314 1.0E-35 T 26-04-2016 IPR011646 KAP family P-loop domain smi_1095 92a1a81ee1204454f6c09b7c28685b3f 603 PANTHER PTHR22674 180 260 1.7E-16 T 26-04-2016 smi_1095 92a1a81ee1204454f6c09b7c28685b3f 603 Gene3D G3DSA:3.40.50.300 15 217 2.0E-10 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1262 7ba2f7864315eb31ac08176cab01184d 104 Gene3D G3DSA:3.30.460.10 5 99 1.8E-16 T 26-04-2016 smi_1262 7ba2f7864315eb31ac08176cab01184d 104 Pfam PF01909 Nucleotidyltransferase domain 21 95 1.5E-8 T 26-04-2016 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 smi_1262 7ba2f7864315eb31ac08176cab01184d 104 SUPERFAMILY SSF81301 7 102 4.8E-16 T 26-04-2016 smi_0402 0f424744fc94ef16806c5b73d4ab1b9d 304 Pfam PF01473 Putative cell wall binding repeat 183 201 3.5E-4 T 26-04-2016 IPR018337 Cell wall/choline-binding repeat smi_0402 0f424744fc94ef16806c5b73d4ab1b9d 304 Pfam PF01473 Putative cell wall binding repeat 205 222 0.2 T 26-04-2016 IPR018337 Cell wall/choline-binding repeat smi_0402 0f424744fc94ef16806c5b73d4ab1b9d 304 Pfam PF01473 Putative cell wall binding repeat 247 264 9.1E-5 T 26-04-2016 IPR018337 Cell wall/choline-binding repeat smi_0402 0f424744fc94ef16806c5b73d4ab1b9d 304 Pfam PF01473 Putative cell wall binding repeat 267 285 1.4E-6 T 26-04-2016 IPR018337 Cell wall/choline-binding repeat smi_0402 0f424744fc94ef16806c5b73d4ab1b9d 304 Pfam PF01473 Putative cell wall binding repeat 227 243 4.7E-4 T 26-04-2016 IPR018337 Cell wall/choline-binding repeat smi_0402 0f424744fc94ef16806c5b73d4ab1b9d 304 Gene3D G3DSA:2.10.270.10 165 235 3.9E-17 T 26-04-2016 smi_0402 0f424744fc94ef16806c5b73d4ab1b9d 304 Gene3D G3DSA:2.10.270.10 236 304 6.1E-20 T 26-04-2016 smi_0402 0f424744fc94ef16806c5b73d4ab1b9d 304 SUPERFAMILY SSF69360 85 303 9.12E-38 T 26-04-2016 smi_1496 16133f58bc9d9ccbee872904a7df8847 136 Gene3D G3DSA:3.40.630.30 35 136 3.2E-27 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase smi_1496 16133f58bc9d9ccbee872904a7df8847 136 SUPERFAMILY SSF55729 28 136 1.47E-24 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase smi_1496 16133f58bc9d9ccbee872904a7df8847 136 PANTHER PTHR23091 12 124 7.6E-19 T 26-04-2016 smi_1496 16133f58bc9d9ccbee872904a7df8847 136 PANTHER PTHR23091:SF259 12 124 7.6E-19 T 26-04-2016 smi_1496 16133f58bc9d9ccbee872904a7df8847 136 Pfam PF13673 Acetyltransferase (GNAT) domain 11 117 1.2E-12 T 26-04-2016 IPR000182 GNAT domain GO:0008080 smi_1946 19a1d3927bbb92b8c6a07ab39703807a 276 PANTHER PTHR18966:SF208 30 266 8.4E-20 T 26-04-2016 smi_1946 19a1d3927bbb92b8c6a07ab39703807a 276 PANTHER PTHR18966 30 266 8.4E-20 T 26-04-2016 smi_1946 19a1d3927bbb92b8c6a07ab39703807a 276 Gene3D G3DSA:3.40.190.10 117 226 3.3E-20 T 26-04-2016 smi_1946 19a1d3927bbb92b8c6a07ab39703807a 276 SUPERFAMILY SSF53850 36 267 2.54E-46 T 26-04-2016 smi_1946 19a1d3927bbb92b8c6a07ab39703807a 276 SMART SM00062 39 267 4.4E-45 T 26-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF smi_1946 19a1d3927bbb92b8c6a07ab39703807a 276 Gene3D G3DSA:3.40.190.10 227 267 8.4E-26 T 26-04-2016 smi_1946 19a1d3927bbb92b8c6a07ab39703807a 276 Gene3D G3DSA:3.40.190.10 37 116 8.4E-26 T 26-04-2016 smi_1946 19a1d3927bbb92b8c6a07ab39703807a 276 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 40 265 3.1E-46 T 26-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF smi_2043 239258059f32ca28959d0a3e145e2056 259 PANTHER PTHR36122 47 258 2.3E-74 T 26-04-2016 smi_2043 239258059f32ca28959d0a3e145e2056 259 PANTHER PTHR36122:SF2 47 258 2.3E-74 T 26-04-2016 smi_2043 239258059f32ca28959d0a3e145e2056 259 TIGRFAM TIGR01528 NMN_trans_PnuC: nicotinamide mononucleotide transporter PnuC 70 256 8.5E-53 T 26-04-2016 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 smi_2043 239258059f32ca28959d0a3e145e2056 259 Pfam PF04973 Nicotinamide mononucleotide transporter 70 253 3.4E-40 T 26-04-2016 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 smi_1491 d36dcb355804978a5a0b6be23dd17491 274 PANTHER PTHR23090 1 274 1.3E-166 T 26-04-2016 smi_1491 d36dcb355804978a5a0b6be23dd17491 274 TIGRFAM TIGR00552 nadE: NAD+ synthetase 17 273 8.6E-72 T 26-04-2016 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|UniPathway: UPA00253 smi_1491 d36dcb355804978a5a0b6be23dd17491 274 SUPERFAMILY SSF52402 3 273 1.21E-84 T 26-04-2016 smi_1491 d36dcb355804978a5a0b6be23dd17491 274 Hamap MF_00193 NH(3)-dependent NAD(+) synthetase [nadE]. 17 268 30.29 T 26-04-2016 IPR022926 NH(3)-dependent NAD(+) synthetase GO:0008795|GO:0009435 KEGG: 00760+6.3.1.5|UniPathway: UPA00253 smi_1491 d36dcb355804978a5a0b6be23dd17491 274 Pfam PF02540 NAD synthase 23 265 1.6E-67 T 26-04-2016 IPR022310 NAD/GMP synthase smi_1491 d36dcb355804978a5a0b6be23dd17491 274 Gene3D G3DSA:3.40.50.620 4 269 4.9E-66 T 26-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold smi_1491 d36dcb355804978a5a0b6be23dd17491 274 PANTHER PTHR23090:SF7 1 274 1.3E-166 T 26-04-2016 smi_1241 6520ae9e340606bcd640ae4b022c7b7b 299 Gene3D G3DSA:3.30.2010.10 70 159 3.3E-33 T 26-04-2016 smi_1241 6520ae9e340606bcd640ae4b022c7b7b 299 PANTHER PTHR10120:SF19 16 299 1.7E-100 T 26-04-2016 smi_1241 6520ae9e340606bcd640ae4b022c7b7b 299 Hamap MF_00188 Protease HtpX [htpX]. 10 299 28.097 T 26-04-2016 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 smi_1241 6520ae9e340606bcd640ae4b022c7b7b 299 PANTHER PTHR10120 16 299 1.7E-100 T 26-04-2016 smi_1241 6520ae9e340606bcd640ae4b022c7b7b 299 Pfam PF01435 Peptidase family M48 77 299 9.5E-36 T 26-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 smi_1195 bc3c81ef14fbcd351e7c774287d3e1b4 187 Pfam PF12822 Protein of unknown function (DUF3816) 8 178 4.8E-19 T 26-04-2016 IPR024529 ECF transporter, substrate-specific component GO:0005215 smi_0956 f2f25cfa4b1a46f24e7a4e2efffc1819 746 PANTHER PTHR30619:SF2 5 746 2.5E-194 T 26-04-2016 smi_0956 f2f25cfa4b1a46f24e7a4e2efffc1819 746 Pfam PF13567 Domain of unknown function (DUF4131) 20 176 1.9E-11 T 26-04-2016 IPR025405 Domain of unknown function DUF4131 smi_0956 f2f25cfa4b1a46f24e7a4e2efffc1819 746 Pfam PF00753 Metallo-beta-lactamase superfamily 492 695 1.1E-5 T 26-04-2016 IPR001279 Metallo-beta-lactamase smi_0956 f2f25cfa4b1a46f24e7a4e2efffc1819 746 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 237 396 1.0E-13 T 26-04-2016 IPR004477 ComEC/Rec2-related protein smi_0956 f2f25cfa4b1a46f24e7a4e2efffc1819 746 Gene3D G3DSA:3.60.15.10 482 727 7.9E-25 T 26-04-2016 IPR001279 Metallo-beta-lactamase smi_0956 f2f25cfa4b1a46f24e7a4e2efffc1819 746 SUPERFAMILY SSF56281 486 733 5.03E-34 T 26-04-2016 IPR001279 Metallo-beta-lactamase smi_0956 f2f25cfa4b1a46f24e7a4e2efffc1819 746 Pfam PF03772 Competence protein 216 458 5.2E-33 T 26-04-2016 IPR004477 ComEC/Rec2-related protein smi_0956 f2f25cfa4b1a46f24e7a4e2efffc1819 746 TIGRFAM TIGR00361 ComEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 108 730 1.4E-81 T 26-04-2016 IPR004797 Competence protein ComEC/Rec2 GO:0016021|GO:0030420 smi_0956 f2f25cfa4b1a46f24e7a4e2efffc1819 746 SMART SM00849 494 701 6.7E-4 T 26-04-2016 IPR001279 Metallo-beta-lactamase smi_0956 f2f25cfa4b1a46f24e7a4e2efffc1819 746 PANTHER PTHR30619 5 746 2.5E-194 T 26-04-2016 smi_0355 1f346b974671d6d3b024dabc6b13598e 607 SUPERFAMILY SSF53067 161 351 1.73E-66 T 26-04-2016 smi_0355 1f346b974671d6d3b024dabc6b13598e 607 Gene3D G3DSA:3.30.420.40 165 199 3.3E-34 T 26-04-2016 smi_0355 1f346b974671d6d3b024dabc6b13598e 607 Gene3D G3DSA:3.30.420.40 289 331 3.3E-34 T 26-04-2016 smi_0355 1f346b974671d6d3b024dabc6b13598e 607 Gene3D G3DSA:1.20.1270.10 502 573 5.4E-19 T 26-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain smi_0355 1f346b974671d6d3b024dabc6b13598e 607 SUPERFAMILY SSF53067 1 157 3.08E-56 T 26-04-2016 smi_0355 1f346b974671d6d3b024dabc6b13598e 607 SUPERFAMILY SSF100920 354 510 8.24E-61 T 26-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain smi_0355 1f346b974671d6d3b024dabc6b13598e 607 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 307 321 - T 26-04-2016 IPR018181 Heat shock protein 70, conserved site smi_0355 1f346b974671d6d3b024dabc6b13598e 607 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 607 36.097 T 26-04-2016 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 smi_0355 1f346b974671d6d3b024dabc6b13598e 607 PANTHER PTHR19375:SF173 2 606 0.0 T 26-04-2016 smi_0355 1f346b974671d6d3b024dabc6b13598e 607 PRINTS PR00301 70kDa heat shock protein signature 172 182 5.5E-78 T 26-04-2016 IPR013126 Heat shock protein 70 family smi_0355 1f346b974671d6d3b024dabc6b13598e 607 PRINTS PR00301 70kDa heat shock protein signature 358 377 5.5E-78 T 26-04-2016 IPR013126 Heat shock protein 70 family smi_0355 1f346b974671d6d3b024dabc6b13598e 607 PRINTS PR00301 70kDa heat shock protein signature 439 455 5.5E-78 T 26-04-2016 IPR013126 Heat shock protein 70 family smi_0355 1f346b974671d6d3b024dabc6b13598e 607 PRINTS PR00301 70kDa heat shock protein signature 31 43 5.5E-78 T 26-04-2016 IPR013126 Heat shock protein 70 family smi_0355 1f346b974671d6d3b024dabc6b13598e 607 PRINTS PR00301 70kDa heat shock protein signature 112 132 5.5E-78 T 26-04-2016 IPR013126 Heat shock protein 70 family smi_0355 1f346b974671d6d3b024dabc6b13598e 607 PRINTS PR00301 70kDa heat shock protein signature 3 16 5.5E-78 T 26-04-2016 IPR013126 Heat shock protein 70 family smi_0355 1f346b974671d6d3b024dabc6b13598e 607 PRINTS PR00301 70kDa heat shock protein signature 53 61 5.5E-78 T 26-04-2016 IPR013126 Heat shock protein 70 family smi_0355 1f346b974671d6d3b024dabc6b13598e 607 PRINTS PR00301 70kDa heat shock protein signature 335 355 5.5E-78 T 26-04-2016 IPR013126 Heat shock protein 70 family smi_0355 1f346b974671d6d3b024dabc6b13598e 607 PRINTS PR00301 70kDa heat shock protein signature 304 320 5.5E-78 T 26-04-2016 IPR013126 Heat shock protein 70 family smi_0355 1f346b974671d6d3b024dabc6b13598e 607 Gene3D G3DSA:2.60.34.10 360 501 9.0E-71 T 26-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain smi_0355 1f346b974671d6d3b024dabc6b13598e 607 Gene3D G3DSA:3.30.420.40 3 38 1.8E-58 T 26-04-2016 smi_0355 1f346b974671d6d3b024dabc6b13598e 607 Gene3D G3DSA:3.30.420.40 99 164 1.8E-58 T 26-04-2016 smi_0355 1f346b974671d6d3b024dabc6b13598e 607 Gene3D G3DSA:3.90.640.10 200 285 5.0E-31 T 26-04-2016 smi_0355 1f346b974671d6d3b024dabc6b13598e 607 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 166 179 - T 26-04-2016 IPR018181 Heat shock protein 70, conserved site smi_0355 1f346b974671d6d3b024dabc6b13598e 607 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 573 4.1E-282 T 26-04-2016 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 smi_0355 1f346b974671d6d3b024dabc6b13598e 607 Gene3D G3DSA:3.30.30.30 39 98 7.0E-12 T 26-04-2016 smi_0355 1f346b974671d6d3b024dabc6b13598e 607 SUPERFAMILY SSF100934 477 576 3.66E-11 T 26-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain smi_0355 1f346b974671d6d3b024dabc6b13598e 607 PANTHER PTHR19375 2 606 0.0 T 26-04-2016 smi_0355 1f346b974671d6d3b024dabc6b13598e 607 Pfam PF00012 Hsp70 protein 4 573 1.2E-238 T 26-04-2016 IPR013126 Heat shock protein 70 family smi_0355 1f346b974671d6d3b024dabc6b13598e 607 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 26-04-2016 IPR018181 Heat shock protein 70, conserved site smi_0718 2a2ed4798d882743c464f5d3fefcdc95 127 PANTHER PTHR40070 1 127 2.7E-41 T 26-04-2016 smi_0718 2a2ed4798d882743c464f5d3fefcdc95 127 Pfam PF06103 Bacterial protein of unknown function (DUF948) 4 91 2.5E-26 T 26-04-2016 IPR009293 Uncharacterised protein family UPF0478 smi_0718 2a2ed4798d882743c464f5d3fefcdc95 127 PANTHER PTHR40070:SF1 1 127 2.7E-41 T 26-04-2016 smi_1869 06c9c19729cec9cea7c2c3d4b921c556 151 PANTHER PTHR37299 1 151 1.9E-12 T 26-04-2016 smi_1869 06c9c19729cec9cea7c2c3d4b921c556 151 SMART SM00850 53 150 5.2E-20 T 26-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 smi_1869 06c9c19729cec9cea7c2c3d4b921c556 151 Pfam PF04397 LytTr DNA-binding domain 54 149 4.4E-19 T 26-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 smi_1869 06c9c19729cec9cea7c2c3d4b921c556 151 Gene3D G3DSA:2.40.50.40 46 113 3.0E-12 T 26-04-2016 smi_1500 f366fed051305a92d7af6ceffce7d954 185 Gene3D G3DSA:3.40.630.30 1 161 2.0E-39 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase smi_1500 f366fed051305a92d7af6ceffce7d954 185 PANTHER PTHR23091 1 63 5.5E-37 T 26-04-2016 smi_1500 f366fed051305a92d7af6ceffce7d954 185 PANTHER PTHR23091 81 145 5.5E-37 T 26-04-2016 smi_1500 f366fed051305a92d7af6ceffce7d954 185 PANTHER PTHR23091:SF257 1 63 5.5E-37 T 26-04-2016 smi_1500 f366fed051305a92d7af6ceffce7d954 185 PANTHER PTHR23091:SF257 81 145 5.5E-37 T 26-04-2016 smi_1500 f366fed051305a92d7af6ceffce7d954 185 SUPERFAMILY SSF55729 1 160 4.46E-25 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase smi_1500 f366fed051305a92d7af6ceffce7d954 185 Pfam PF13673 Acetyltransferase (GNAT) domain 26 161 4.3E-11 T 26-04-2016 IPR000182 GNAT domain GO:0008080 smi_0526 75d7a7b1e34e37e3459c30a69c66b859 302 Pfam PF04556 DpnII restriction endonuclease 16 297 3.5E-92 T 26-04-2016 IPR007637 Restriction endonuclease, type II, DpmII-like GO:0003677|GO:0009036|GO:0009307 smi_0526 75d7a7b1e34e37e3459c30a69c66b859 302 PIRSF PIRSF016080 9 301 5.4E-113 T 26-04-2016 IPR021191 Restriction endonuclease, type II, DpmII GO:0003677|GO:0009036|GO:0009307 smi_1406 7b87450b82d3fbf62b2e8b16cf1cd667 308 PIRSF PIRSF003097 1 308 2.1E-77 T 26-04-2016 IPR004513 Cell division protein FtsX GO:0007049|GO:0016021 smi_1406 7b87450b82d3fbf62b2e8b16cf1cd667 308 Pfam PF02687 FtsX-like permease family 186 308 1.4E-13 T 26-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 smi_1406 7b87450b82d3fbf62b2e8b16cf1cd667 308 PANTHER PTHR30489 4 308 5.5E-36 T 26-04-2016 smi_0215 16445b7c164b7a8bef335c8c43ea5390 123 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 1 110 18.931 T 26-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 smi_0215 16445b7c164b7a8bef335c8c43ea5390 123 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 8 105 1.0E-48 T 26-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 smi_0215 16445b7c164b7a8bef335c8c43ea5390 123 ProSitePatterns PS00648 Bacterial ribonuclease P protein component signature. 50 64 - T 26-04-2016 IPR020539 Ribonuclease P, conserved site GO:0004526 smi_0215 16445b7c164b7a8bef335c8c43ea5390 123 SUPERFAMILY SSF54211 1 112 3.79E-32 T 26-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold smi_0215 16445b7c164b7a8bef335c8c43ea5390 123 PANTHER PTHR33992 1 118 1.9E-37 T 26-04-2016 smi_0215 16445b7c164b7a8bef335c8c43ea5390 123 Gene3D G3DSA:3.30.230.10 1 112 3.3E-37 T 26-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup smi_0215 16445b7c164b7a8bef335c8c43ea5390 123 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 2 110 1.2E-30 T 26-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 smi_0215 16445b7c164b7a8bef335c8c43ea5390 123 Pfam PF00825 Ribonuclease P 1 105 4.3E-32 T 26-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 smi_1422 56cf3f001d1e5fa2ae0b3947a63e5305 281 TIGRFAM TIGR00762 DegV: EDD domain protein, DegV family 4 278 8.4E-52 T 26-04-2016 IPR003797 DegV smi_1422 56cf3f001d1e5fa2ae0b3947a63e5305 281 Gene3D G3DSA:2.20.28.50 29 66 1.4E-13 T 26-04-2016 smi_1422 56cf3f001d1e5fa2ae0b3947a63e5305 281 PANTHER PTHR33434:SF3 1 281 5.0E-96 T 26-04-2016 smi_1422 56cf3f001d1e5fa2ae0b3947a63e5305 281 Gene3D G3DSA:3.30.1180.10 154 279 1.2E-35 T 26-04-2016 smi_1422 56cf3f001d1e5fa2ae0b3947a63e5305 281 SUPERFAMILY SSF82549 1 281 1.46E-64 T 26-04-2016 smi_1422 56cf3f001d1e5fa2ae0b3947a63e5305 281 PANTHER PTHR33434 1 281 5.0E-96 T 26-04-2016 smi_1422 56cf3f001d1e5fa2ae0b3947a63e5305 281 Pfam PF02645 Uncharacterised protein, DegV family COG1307 2 272 4.2E-68 T 26-04-2016 IPR003797 DegV smi_1422 56cf3f001d1e5fa2ae0b3947a63e5305 281 Gene3D G3DSA:3.40.50.10440 1 28 8.0E-31 T 26-04-2016 smi_1422 56cf3f001d1e5fa2ae0b3947a63e5305 281 Gene3D G3DSA:3.40.50.10440 67 153 8.0E-31 T 26-04-2016 smi_0804 f946a1d34f01326d784bfd35b07e5769 106 Gene3D G3DSA:3.40.50.10580 7 105 5.3E-19 T 26-04-2016 IPR008218 ATPase, V1 complex, subunit F GO:0034220 smi_0804 f946a1d34f01326d784bfd35b07e5769 106 SUPERFAMILY SSF159468 8 105 7.85E-22 T 26-04-2016 IPR008218 ATPase, V1 complex, subunit F GO:0034220 smi_0804 f946a1d34f01326d784bfd35b07e5769 106 Pfam PF01990 ATP synthase (F/14-kDa) subunit 8 97 2.6E-18 T 26-04-2016 IPR008218 ATPase, V1 complex, subunit F GO:0034220 smi_0557 42c52f8253484e33960e1014a7395622 334 Gene3D G3DSA:3.90.180.10 1 148 1.2E-42 T 26-04-2016 IPR011032 GroES-like smi_0557 42c52f8253484e33960e1014a7395622 334 SUPERFAMILY SSF50129 9 158 5.33E-35 T 26-04-2016 IPR011032 GroES-like smi_0557 42c52f8253484e33960e1014a7395622 334 SMART SM00829 13 330 4.1E-14 T 26-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 smi_0557 42c52f8253484e33960e1014a7395622 334 PANTHER PTHR11695 16 251 1.1E-83 T 26-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 smi_0557 42c52f8253484e33960e1014a7395622 334 PANTHER PTHR11695 268 334 1.1E-83 T 26-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 smi_0557 42c52f8253484e33960e1014a7395622 334 PANTHER PTHR11695:SF294 16 251 1.1E-83 T 26-04-2016 smi_0557 42c52f8253484e33960e1014a7395622 334 PANTHER PTHR11695:SF294 268 334 1.1E-83 T 26-04-2016 smi_0557 42c52f8253484e33960e1014a7395622 334 Gene3D G3DSA:3.40.50.720 149 241 7.1E-16 T 26-04-2016 IPR016040 NAD(P)-binding domain smi_0557 42c52f8253484e33960e1014a7395622 334 SUPERFAMILY SSF51735 118 255 1.32E-29 T 26-04-2016 IPR016040 NAD(P)-binding domain smi_0557 42c52f8253484e33960e1014a7395622 334 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 89 4.4E-12 T 26-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 smi_0557 42c52f8253484e33960e1014a7395622 334 Pfam PF13602 Zinc-binding dehydrogenase 187 330 1.1E-26 T 26-04-2016 smi_2057 1a74228223dd13e9739f3f2b303a26b1 220 Pfam PF00156 Phosphoribosyl transferase domain 176 219 5.7E-8 T 26-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 smi_2057 1a74228223dd13e9739f3f2b303a26b1 220 Gene3D G3DSA:3.40.50.2020 56 219 3.2E-18 T 26-04-2016 IPR029057 Phosphoribosyltransferase-like smi_2057 1a74228223dd13e9739f3f2b303a26b1 220 PANTHER PTHR11907 24 220 3.2E-50 T 26-04-2016 smi_2057 1a74228223dd13e9739f3f2b303a26b1 220 SUPERFAMILY SSF53271 46 219 4.57E-21 T 26-04-2016 IPR029057 Phosphoribosyltransferase-like smi_2057 1a74228223dd13e9739f3f2b303a26b1 220 PANTHER PTHR11907:SF9 24 220 3.2E-50 T 26-04-2016 smi_0317 668d4122fc9c403157e81b84ad909c31 427 PANTHER PTHR21090:SF19 1 426 8.6E-276 T 26-04-2016 smi_0317 668d4122fc9c403157e81b84ad909c31 427 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 419 6.5E-164 T 26-04-2016 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 smi_0317 668d4122fc9c403157e81b84ad909c31 427 Gene3D G3DSA:3.65.10.10 224 421 7.7E-58 T 26-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 smi_0317 668d4122fc9c403157e81b84ad909c31 427 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 13 410 3.1E-105 T 26-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 smi_0317 668d4122fc9c403157e81b84ad909c31 427 PANTHER PTHR21090 1 426 8.6E-276 T 26-04-2016 smi_0317 668d4122fc9c403157e81b84ad909c31 427 Gene3D G3DSA:3.65.10.10 22 223 1.5E-65 T 26-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 smi_0317 668d4122fc9c403157e81b84ad909c31 427 SUPERFAMILY SSF55205 1 421 2.45E-134 T 26-04-2016 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 smi_0317 668d4122fc9c403157e81b84ad909c31 427 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 420 45.377 T 26-04-2016 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 smi_0816 7ab59ef80e7e7f95247170032bf42f85 345 PANTHER PTHR34388 1 344 7.2E-66 T 26-04-2016 smi_0816 7ab59ef80e7e7f95247170032bf42f85 345 Pfam PF06144 DNA polymerase III, delta subunit 20 192 1.8E-46 T 26-04-2016 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 smi_0816 7ab59ef80e7e7f95247170032bf42f85 345 SUPERFAMILY SSF48019 216 341 2.47E-19 T 26-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 smi_0816 7ab59ef80e7e7f95247170032bf42f85 345 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 16 341 2.4E-84 T 26-04-2016 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 smi_0957 cdcefdb1ddfcaa1424ce9be9b61bdceb 195 ProSitePatterns PS00211 ABC transporters family signature. 115 129 - T 26-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 smi_0957 cdcefdb1ddfcaa1424ce9be9b61bdceb 195 SUPERFAMILY SSF52540 12 194 3.78E-38 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0957 cdcefdb1ddfcaa1424ce9be9b61bdceb 195 PANTHER PTHR24220:SF427 3 192 5.7E-50 T 26-04-2016 smi_0957 cdcefdb1ddfcaa1424ce9be9b61bdceb 195 SMART SM00382 25 193 2.4E-7 T 26-04-2016 IPR003593 AAA+ ATPase domain smi_0957 cdcefdb1ddfcaa1424ce9be9b61bdceb 195 Gene3D G3DSA:3.40.50.300 1 194 3.2E-34 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0957 cdcefdb1ddfcaa1424ce9be9b61bdceb 195 Pfam PF00005 ABC transporter 16 143 2.1E-13 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 smi_0957 cdcefdb1ddfcaa1424ce9be9b61bdceb 195 PANTHER PTHR24220 3 192 5.7E-50 T 26-04-2016 smi_0091 763006683b60a326b6f787de8c39864f 899 TIGRFAM TIGR01168 YSIRK_signal: gram-positive signal peptide, YSIRK family 1 38 1.7E-12 T 26-04-2016 IPR005877 YSIRK Gram-positive signal peptide GO:0016020 smi_0091 763006683b60a326b6f787de8c39864f 899 Pfam PF04650 YSIRK type signal peptide 8 32 3.3E-9 T 26-04-2016 IPR005877 YSIRK Gram-positive signal peptide GO:0016020 smi_0091 763006683b60a326b6f787de8c39864f 899 Pfam PF11966 Fibronectin-binding repeat 208 288 2.9E-27 T 26-04-2016 IPR021021 Fibronectin-binding repeat, SSURE smi_0091 763006683b60a326b6f787de8c39864f 899 Pfam PF11966 Fibronectin-binding repeat 510 592 7.1E-42 T 26-04-2016 IPR021021 Fibronectin-binding repeat, SSURE smi_0091 763006683b60a326b6f787de8c39864f 899 Pfam PF11966 Fibronectin-binding repeat 358 440 7.1E-42 T 26-04-2016 IPR021021 Fibronectin-binding repeat, SSURE smi_0091 763006683b60a326b6f787de8c39864f 899 Pfam PF11966 Fibronectin-binding repeat 662 744 6.6E-43 T 26-04-2016 IPR021021 Fibronectin-binding repeat, SSURE smi_0091 763006683b60a326b6f787de8c39864f 899 TIGRFAM TIGR01167 LPXTG_anchor: LPXTG cell wall anchor domain 863 897 5.6E-5 T 26-04-2016 IPR019931 LPXTG cell wall anchor domain smi_0117 17790d81498df826dd487aaba8943af0 415 SUPERFAMILY SSF103473 7 410 2.75E-16 T 26-04-2016 IPR020846 Major facilitator superfamily domain smi_0117 17790d81498df826dd487aaba8943af0 415 PANTHER PTHR23513:SF7 1 412 3.6E-91 T 26-04-2016 smi_0117 17790d81498df826dd487aaba8943af0 415 PANTHER PTHR23513 1 412 3.6E-91 T 26-04-2016 smi_1804 b791e7716daf03d667fecc7a1116e0fe 159 SUPERFAMILY SSF55729 18 148 2.3E-15 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase smi_1804 b791e7716daf03d667fecc7a1116e0fe 159 Pfam PF13302 Acetyltransferase (GNAT) domain 11 143 9.5E-9 T 26-04-2016 IPR000182 GNAT domain GO:0008080 smi_1804 b791e7716daf03d667fecc7a1116e0fe 159 Gene3D G3DSA:3.40.630.30 8 148 1.1E-20 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase smi_1969 01dc959735d5c0d3fccf0a19bfd6a287 268 PANTHER PTHR30614:SF15 31 267 4.6E-63 T 26-04-2016 smi_1969 01dc959735d5c0d3fccf0a19bfd6a287 268 PANTHER PTHR30614 31 267 4.6E-63 T 26-04-2016 smi_1969 01dc959735d5c0d3fccf0a19bfd6a287 268 Gene3D G3DSA:3.40.190.10 224 263 5.7E-39 T 26-04-2016 smi_1969 01dc959735d5c0d3fccf0a19bfd6a287 268 Gene3D G3DSA:3.40.190.10 36 119 5.7E-39 T 26-04-2016 smi_1969 01dc959735d5c0d3fccf0a19bfd6a287 268 SMART SM00079 39 264 2.9E-6 T 26-04-2016 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 smi_1969 01dc959735d5c0d3fccf0a19bfd6a287 268 SUPERFAMILY SSF53850 5 260 1.38E-66 T 26-04-2016 smi_1969 01dc959735d5c0d3fccf0a19bfd6a287 268 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 40 260 2.8E-58 T 26-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF smi_1969 01dc959735d5c0d3fccf0a19bfd6a287 268 SMART SM00062 39 265 2.2E-57 T 26-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF smi_1969 01dc959735d5c0d3fccf0a19bfd6a287 268 Gene3D G3DSA:3.40.190.10 120 221 1.4E-24 T 26-04-2016 smi_0572 d9d2f80a2de803f7292c294ea5f1f18f 217 PANTHER PTHR11587:SF3 1 207 3.7E-95 T 26-04-2016 smi_0572 d9d2f80a2de803f7292c294ea5f1f18f 217 PANTHER PTHR11587 1 207 3.7E-95 T 26-04-2016 smi_0572 d9d2f80a2de803f7292c294ea5f1f18f 217 Pfam PF06508 Queuosine biosynthesis protein QueC 6 208 1.5E-83 T 26-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 smi_0572 d9d2f80a2de803f7292c294ea5f1f18f 217 PIRSF PIRSF006293 2 216 8.4E-77 T 26-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 smi_0572 d9d2f80a2de803f7292c294ea5f1f18f 217 SUPERFAMILY SSF52402 5 209 1.01E-65 T 26-04-2016 smi_0572 d9d2f80a2de803f7292c294ea5f1f18f 217 Gene3D G3DSA:3.40.50.620 4 208 3.0E-79 T 26-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold smi_0572 d9d2f80a2de803f7292c294ea5f1f18f 217 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 6 203 2.0E-80 T 26-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 smi_0572 d9d2f80a2de803f7292c294ea5f1f18f 217 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 4 216 48.035 T 26-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 smi_1484 ee9e22ca82e81e0509b19006a385321b 563 Pfam PF00672 HAMP domain 280 348 3.0E-13 T 26-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 smi_1484 ee9e22ca82e81e0509b19006a385321b 563 PANTHER PTHR34220 1 563 9.6E-62 T 26-04-2016 smi_1484 ee9e22ca82e81e0509b19006a385321b 563 Pfam PF06580 Histidine kinase 364 443 4.2E-25 T 26-04-2016 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 smi_1484 ee9e22ca82e81e0509b19006a385321b 563 Gene3D G3DSA:3.30.450.20 80 169 1.2E-9 T 26-04-2016 smi_1484 ee9e22ca82e81e0509b19006a385321b 563 SMART SM00304 300 352 3.5E-9 T 26-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 smi_1484 ee9e22ca82e81e0509b19006a385321b 563 SUPERFAMILY SSF55874 420 557 6.81E-20 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain smi_1484 ee9e22ca82e81e0509b19006a385321b 563 PANTHER PTHR34220:SF3 1 563 9.6E-62 T 26-04-2016 smi_1484 ee9e22ca82e81e0509b19006a385321b 563 Gene3D G3DSA:3.30.565.10 414 559 1.3E-21 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain smi_1484 ee9e22ca82e81e0509b19006a385321b 563 Pfam PF02743 Cache domain 36 262 1.3E-34 T 26-04-2016 IPR033479 Double Cache domain 1 smi_1484 ee9e22ca82e81e0509b19006a385321b 563 SUPERFAMILY SSF158472 302 350 2.62E-5 T 26-04-2016 smi_1484 ee9e22ca82e81e0509b19006a385321b 563 Gene3D G3DSA:3.30.450.20 170 279 2.3E-17 T 26-04-2016 smi_1484 ee9e22ca82e81e0509b19006a385321b 563 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 463 557 3.6E-8 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain smi_1484 ee9e22ca82e81e0509b19006a385321b 563 SMART SM00387 454 561 9.9E-8 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain smi_1735 10a96b0382c7b0d15ca88cf3b2b2334a 100 Pfam PF05164 Cell division protein ZapA 13 88 1.9E-4 T 26-04-2016 IPR007838 Cell division protein ZapA-like smi_1735 10a96b0382c7b0d15ca88cf3b2b2334a 100 SUPERFAMILY SSF102829 12 89 4.71E-7 T 26-04-2016 IPR007838 Cell division protein ZapA-like smi_1754 8dbce18116b698ca02ff8c4a21ffe319 113 PIRSF PIRSF029938 1 109 5.3E-41 T 26-04-2016 IPR011229 Cell cycle protein GpsB smi_1754 8dbce18116b698ca02ff8c4a21ffe319 113 Pfam PF05103 DivIVA protein 7 64 6.3E-15 T 26-04-2016 IPR007793 DivIVA family smi_1754 8dbce18116b698ca02ff8c4a21ffe319 113 Hamap MF_02011 Cell cycle protein GpsB [gpsB]. 1 105 22.985 T 26-04-2016 IPR011229 Cell cycle protein GpsB smi_1754 8dbce18116b698ca02ff8c4a21ffe319 113 PANTHER PTHR35794:SF1 1 113 1.2E-52 T 26-04-2016 smi_1754 8dbce18116b698ca02ff8c4a21ffe319 113 TIGRFAM TIGR03544 DivI1A_domain: DivIVA domain 7 39 3.5E-12 T 26-04-2016 IPR019933 DivIVA domain smi_1754 8dbce18116b698ca02ff8c4a21ffe319 113 PANTHER PTHR35794 1 113 1.2E-52 T 26-04-2016 smi_1426 6fcbb4cc6e6f75db89468d2be0c28392 446 ProSitePatterns PS00610 Sodium:neurotransmitter symporter family signature 1. 28 42 - T 26-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 smi_1426 6fcbb4cc6e6f75db89468d2be0c28392 446 SUPERFAMILY SSF161070 5 445 1.83E-124 T 26-04-2016 smi_1426 6fcbb4cc6e6f75db89468d2be0c28392 446 PANTHER PTHR11616:SF167 3 446 8.4E-202 T 26-04-2016 smi_1426 6fcbb4cc6e6f75db89468d2be0c28392 446 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 87 113 1.8E-13 T 26-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 smi_1426 6fcbb4cc6e6f75db89468d2be0c28392 446 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 41 60 1.8E-13 T 26-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 smi_1426 6fcbb4cc6e6f75db89468d2be0c28392 446 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 12 33 1.8E-13 T 26-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 smi_1426 6fcbb4cc6e6f75db89468d2be0c28392 446 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 426 446 1.8E-13 T 26-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 smi_1426 6fcbb4cc6e6f75db89468d2be0c28392 446 PANTHER PTHR11616 3 446 8.4E-202 T 26-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 smi_1426 6fcbb4cc6e6f75db89468d2be0c28392 446 Pfam PF00209 Sodium:neurotransmitter symporter family 150 445 6.4E-29 T 26-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 smi_1426 6fcbb4cc6e6f75db89468d2be0c28392 446 Pfam PF00209 Sodium:neurotransmitter symporter family 5 116 2.0E-21 T 26-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 smi_0145 7cd7e37e32095dba817f91a89376b541 179 PANTHER PTHR23407 1 177 1.6E-54 T 26-04-2016 smi_0145 7cd7e37e32095dba817f91a89376b541 179 PIRSF PIRSF006806 1 178 3.8E-47 T 26-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase smi_0145 7cd7e37e32095dba817f91a89376b541 179 Gene3D G3DSA:3.40.50.10420 1 177 3.8E-52 T 26-04-2016 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain smi_0145 7cd7e37e32095dba817f91a89376b541 179 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 2 174 1.1E-52 T 26-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase smi_0145 7cd7e37e32095dba817f91a89376b541 179 SUPERFAMILY SSF100950 1 177 6.14E-50 T 26-04-2016 smi_0145 7cd7e37e32095dba817f91a89376b541 179 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 2 174 4.0E-43 T 26-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase smi_0145 7cd7e37e32095dba817f91a89376b541 179 PANTHER PTHR23407:SF1 1 177 1.6E-54 T 26-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase smi_1228 21d475fe9eae8163c8144837ee4229d8 235 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 6 233 2.9E-39 T 26-04-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 smi_1228 21d475fe9eae8163c8144837ee4229d8 235 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 1 235 24.695 T 26-04-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 smi_1228 21d475fe9eae8163c8144837ee4229d8 235 SUPERFAMILY SSF53448 1 232 1.35E-47 T 26-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases smi_1228 21d475fe9eae8163c8144837ee4229d8 235 Gene3D G3DSA:3.90.550.10 2 234 7.9E-58 T 26-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases smi_1228 21d475fe9eae8163c8144837ee4229d8 235 PANTHER PTHR32125:SF4 1 234 3.7E-66 T 26-04-2016 smi_1228 21d475fe9eae8163c8144837ee4229d8 235 PANTHER PTHR32125 1 234 3.7E-66 T 26-04-2016 smi_1228 21d475fe9eae8163c8144837ee4229d8 235 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 108 115 - T 26-04-2016 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 smi_0613 e161abe57c4f57bbfd0a2dcaa2302334 685 Pfam PF03717 Penicillin-binding Protein dimerisation domain 62 299 4.9E-34 T 26-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 smi_0613 e161abe57c4f57bbfd0a2dcaa2302334 685 PANTHER PTHR30627:SF2 173 460 3.3E-166 T 26-04-2016 smi_0613 e161abe57c4f57bbfd0a2dcaa2302334 685 PANTHER PTHR30627:SF2 479 685 3.3E-166 T 26-04-2016 smi_0613 e161abe57c4f57bbfd0a2dcaa2302334 685 PANTHER PTHR30627:SF2 2 111 3.3E-166 T 26-04-2016 smi_0613 e161abe57c4f57bbfd0a2dcaa2302334 685 Pfam PF00905 Penicillin binding protein transpeptidase domain 349 675 9.8E-72 T 26-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 smi_0613 e161abe57c4f57bbfd0a2dcaa2302334 685 Gene3D G3DSA:3.40.710.10 316 680 7.9E-68 T 26-04-2016 IPR012338 Beta-lactamase/transpeptidase-like smi_0613 e161abe57c4f57bbfd0a2dcaa2302334 685 SUPERFAMILY SSF56601 317 682 3.34E-58 T 26-04-2016 IPR012338 Beta-lactamase/transpeptidase-like smi_0613 e161abe57c4f57bbfd0a2dcaa2302334 685 PANTHER PTHR30627 173 460 3.3E-166 T 26-04-2016 smi_0613 e161abe57c4f57bbfd0a2dcaa2302334 685 PANTHER PTHR30627 479 685 3.3E-166 T 26-04-2016 smi_0613 e161abe57c4f57bbfd0a2dcaa2302334 685 PANTHER PTHR30627 2 111 3.3E-166 T 26-04-2016 smi_0613 e161abe57c4f57bbfd0a2dcaa2302334 685 Gene3D G3DSA:3.90.1310.10 200 315 1.3E-26 T 26-04-2016 smi_0613 e161abe57c4f57bbfd0a2dcaa2302334 685 SUPERFAMILY SSF56519 186 316 1.15E-28 T 26-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 smi_0613 e161abe57c4f57bbfd0a2dcaa2302334 685 SUPERFAMILY SSF56519 57 119 1.15E-28 T 26-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 smi_0688 c13dc067d2cbc7b25e91d564d59281a5 191 Gene3D G3DSA:3.40.50.850 2 183 8.8E-44 T 26-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 smi_0688 c13dc067d2cbc7b25e91d564d59281a5 191 PANTHER PTHR11080 1 183 6.6E-43 T 26-04-2016 smi_0688 c13dc067d2cbc7b25e91d564d59281a5 191 Pfam PF00857 Isochorismatase family 4 180 4.6E-32 T 26-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 smi_0688 c13dc067d2cbc7b25e91d564d59281a5 191 SUPERFAMILY SSF52499 2 182 5.1E-48 T 26-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 smi_1685 cbc3c55c9e3ff9d0cbef31300a81e832 144 Pfam PF01047 MarR family 33 91 2.6E-10 T 26-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 smi_1685 cbc3c55c9e3ff9d0cbef31300a81e832 144 SUPERFAMILY SSF46785 8 142 1.29E-29 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain smi_1685 cbc3c55c9e3ff9d0cbef31300a81e832 144 SMART SM00347 26 126 5.4E-20 T 26-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 smi_1685 cbc3c55c9e3ff9d0cbef31300a81e832 144 PANTHER PTHR33164 32 144 1.1E-20 T 26-04-2016 smi_1685 cbc3c55c9e3ff9d0cbef31300a81e832 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 67 82 1.2E-14 T 26-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 smi_1685 cbc3c55c9e3ff9d0cbef31300a81e832 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 50 66 1.2E-14 T 26-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 smi_1685 cbc3c55c9e3ff9d0cbef31300a81e832 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 116 136 1.2E-14 T 26-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 smi_1685 cbc3c55c9e3ff9d0cbef31300a81e832 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 86 102 1.2E-14 T 26-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 smi_1685 cbc3c55c9e3ff9d0cbef31300a81e832 144 Gene3D G3DSA:1.10.10.10 2 142 4.2E-37 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain smi_1806 06e639918861deab7ddc9ee6fc5d9041 216 Pfam PF01569 PAP2 superfamily 91 205 9.7E-22 T 26-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase smi_1806 06e639918861deab7ddc9ee6fc5d9041 216 Gene3D G3DSA:1.20.144.10 34 197 3.4E-29 T 26-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase smi_1806 06e639918861deab7ddc9ee6fc5d9041 216 SMART SM00014 89 199 1.5E-18 T 26-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase smi_1806 06e639918861deab7ddc9ee6fc5d9041 216 PANTHER PTHR14969 32 209 5.2E-34 T 26-04-2016 smi_1806 06e639918861deab7ddc9ee6fc5d9041 216 SUPERFAMILY SSF48317 10 210 2.49E-37 T 26-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase smi_0239 1a060355f7f1ee8860b185172a9120db 159 Gene3D G3DSA:1.10.1740.10 2 89 8.8E-4 T 26-04-2016 smi_0239 1a060355f7f1ee8860b185172a9120db 159 SUPERFAMILY SSF88946 2 88 5.89E-7 T 26-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 smi_0013 1a060355f7f1ee8860b185172a9120db 159 Gene3D G3DSA:1.10.1740.10 2 89 8.8E-4 T 26-04-2016 smi_0013 1a060355f7f1ee8860b185172a9120db 159 SUPERFAMILY SSF88946 2 88 5.89E-7 T 26-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 smi_0769 ac7893ade1ee64974ddaeca3c3b86121 328 PANTHER PTHR22916:SF24 1 278 1.7E-91 T 26-04-2016 smi_0769 ac7893ade1ee64974ddaeca3c3b86121 328 Gene3D G3DSA:3.90.550.10 2 199 1.6E-56 T 26-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases smi_0769 ac7893ade1ee64974ddaeca3c3b86121 328 SUPERFAMILY SSF53448 5 234 1.44E-53 T 26-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases smi_0769 ac7893ade1ee64974ddaeca3c3b86121 328 PANTHER PTHR22916 1 278 1.7E-91 T 26-04-2016 smi_0769 ac7893ade1ee64974ddaeca3c3b86121 328 Pfam PF00535 Glycosyl transferase family 2 7 160 3.9E-36 T 26-04-2016 IPR001173 Glycosyltransferase 2-like smi_0737 fae1c027e08f75056eb9f0d92f32a5b2 217 PANTHER PTHR10010 1 216 1.8E-57 T 26-04-2016 smi_0737 fae1c027e08f75056eb9f0d92f32a5b2 217 PIRSF PIRSF003107 1 217 6.8E-62 T 26-04-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 smi_0737 fae1c027e08f75056eb9f0d92f32a5b2 217 SUPERFAMILY SSF109755 3 216 2.3E-65 T 26-04-2016 smi_0737 fae1c027e08f75056eb9f0d92f32a5b2 217 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 4 215 2.9E-76 T 26-04-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 smi_0737 fae1c027e08f75056eb9f0d92f32a5b2 217 PANTHER PTHR10010:SF14 1 216 1.8E-57 T 26-04-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 smi_0737 fae1c027e08f75056eb9f0d92f32a5b2 217 Gene3D G3DSA:1.20.58.220 114 216 1.2E-28 T 26-04-2016 smi_0737 fae1c027e08f75056eb9f0d92f32a5b2 217 Pfam PF01895 PhoU domain 19 104 1.2E-23 T 26-04-2016 IPR026022 PhoU domain smi_0737 fae1c027e08f75056eb9f0d92f32a5b2 217 Pfam PF01895 PhoU domain 121 206 4.5E-16 T 26-04-2016 IPR026022 PhoU domain smi_0737 fae1c027e08f75056eb9f0d92f32a5b2 217 Gene3D G3DSA:1.20.58.220 2 111 5.7E-36 T 26-04-2016 smi_1022 14f3d44f20e84e62048d6a8510a96b0c 165 SUPERFAMILY SSF55804 8 162 4.84E-31 T 26-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 smi_1022 14f3d44f20e84e62048d6a8510a96b0c 165 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 13 162 2.0E-36 T 26-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- smi_1022 14f3d44f20e84e62048d6a8510a96b0c 165 PANTHER PTHR30505:SF2 1 162 1.8E-26 T 26-04-2016 smi_1022 14f3d44f20e84e62048d6a8510a96b0c 165 Gene3D G3DSA:3.40.930.10 4 162 6.1E-39 T 26-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- smi_1022 14f3d44f20e84e62048d6a8510a96b0c 165 PANTHER PTHR30505 1 162 1.8E-26 T 26-04-2016 smi_1716 8ffec88a1629f40442f0ef20fc97629b 39 Gene3D G3DSA:1.10.10.10 2 33 2.7E-4 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain smi_0722 c3e1f96b577727ed80f89875d00258e9 257 PANTHER PTHR19288:SF3 2 253 7.5E-94 T 26-04-2016 smi_0722 c3e1f96b577727ed80f89875d00258e9 257 SUPERFAMILY SSF56784 2 252 1.87E-70 T 26-04-2016 IPR023214 HAD-like domain smi_0722 c3e1f96b577727ed80f89875d00258e9 257 TIGRFAM TIGR01460 HAD-SF-IIA: HAD hydrolase, family IIA 7 228 1.7E-38 T 26-04-2016 IPR006357 HAD-superfamily hydrolase, subfamily IIA smi_0722 c3e1f96b577727ed80f89875d00258e9 257 PANTHER PTHR19288 2 253 7.5E-94 T 26-04-2016 smi_0722 c3e1f96b577727ed80f89875d00258e9 257 Gene3D G3DSA:3.40.50.1000 1 80 2.1E-39 T 26-04-2016 IPR023214 HAD-like domain smi_0722 c3e1f96b577727ed80f89875d00258e9 257 Gene3D G3DSA:3.40.50.1000 178 251 2.1E-39 T 26-04-2016 IPR023214 HAD-like domain smi_0722 c3e1f96b577727ed80f89875d00258e9 257 TIGRFAM TIGR01457 HAD-SF-IIA-hyp2: HAD hydrolase, TIGR01457 family 3 252 2.9E-136 T 26-04-2016 IPR006354 HAD-superfamily hydrolase, subfamily IIA, hypothetical 1 smi_0722 c3e1f96b577727ed80f89875d00258e9 257 Gene3D G3DSA:3.40.50.10410 86 177 1.0E-36 T 26-04-2016 IPR023215 Nitrophenylphosphatase-like domain smi_0722 c3e1f96b577727ed80f89875d00258e9 257 Pfam PF13242 HAD-hyrolase-like 179 251 3.3E-20 T 26-04-2016 smi_0722 c3e1f96b577727ed80f89875d00258e9 257 Pfam PF13344 Haloacid dehalogenase-like hydrolase 7 106 3.7E-19 T 26-04-2016 IPR006357 HAD-superfamily hydrolase, subfamily IIA smi_0382 b8ab3150ee264512ae29e7518b7ecb04 77 Pfam PF08984 Domain of unknown function (DUF1858) 5 63 1.0E-17 T 26-04-2016 IPR015077 Domain of unknown function DUF1858 smi_0382 b8ab3150ee264512ae29e7518b7ecb04 77 Gene3D G3DSA:1.10.3910.10 1 75 1.2E-32 T 26-04-2016 IPR015077 Domain of unknown function DUF1858 smi_0382 b8ab3150ee264512ae29e7518b7ecb04 77 SUPERFAMILY SSF140683 1 75 5.62E-22 T 26-04-2016 smi_1067 b7f5fec6de5c8322c47c7df4d564e777 1091 Hamap MF_01453 ATP-dependent helicase/deoxyribonuclease subunit B [rexB]. 1 1091 40.402 T 26-04-2016 IPR014141 DNA helicase subunit RexB GO:0016788|GO:0016817 smi_1067 b7f5fec6de5c8322c47c7df4d564e777 1091 SUPERFAMILY SSF52540 291 652 1.46E-39 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1067 b7f5fec6de5c8322c47c7df4d564e777 1091 PANTHER PTHR30591:SF1 5 1091 4.6E-289 T 26-04-2016 smi_1067 b7f5fec6de5c8322c47c7df4d564e777 1091 SUPERFAMILY SSF52980 747 933 9.12E-9 T 26-04-2016 IPR011335 Restriction endonuclease type II-like smi_1067 b7f5fec6de5c8322c47c7df4d564e777 1091 Pfam PF12705 PD-(D/E)XK nuclease superfamily 748 1030 6.0E-30 T 26-04-2016 smi_1067 b7f5fec6de5c8322c47c7df4d564e777 1091 PANTHER PTHR30591 5 1091 4.6E-289 T 26-04-2016 smi_1067 b7f5fec6de5c8322c47c7df4d564e777 1091 TIGRFAM TIGR02774 rexB_recomb: ATP-dependent nuclease subunit B 2 1077 0.0 T 26-04-2016 IPR014141 DNA helicase subunit RexB GO:0016788|GO:0016817 smi_1067 b7f5fec6de5c8322c47c7df4d564e777 1091 Gene3D G3DSA:3.40.50.300 274 362 3.4E-5 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1634 6b167130f92c5673a1695ee5c033474c 100 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 7 100 2.0E-32 T 26-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS smi_1634 6b167130f92c5673a1695ee5c033474c 100 PANTHER PTHR21043 1 100 6.1E-38 T 26-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS smi_1634 6b167130f92c5673a1695ee5c033474c 100 Pfam PF02410 Ribosomal silencing factor during starvation 10 100 8.5E-23 T 26-04-2016 smi_1634 6b167130f92c5673a1695ee5c033474c 100 SUPERFAMILY SSF81301 1 100 5.72E-33 T 26-04-2016 smi_1634 6b167130f92c5673a1695ee5c033474c 100 Gene3D G3DSA:3.30.460.10 2 100 3.9E-34 T 26-04-2016 smi_1634 6b167130f92c5673a1695ee5c033474c 100 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 1 100 20.019 T 26-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS smi_0271 80aeae5caee7e8f037e014787d2f869f 230 Pfam PF13306 Leucine rich repeats (6 copies) 97 198 1.5E-17 T 26-04-2016 IPR026906 Leucine rich repeat 5 smi_0271 80aeae5caee7e8f037e014787d2f869f 230 PANTHER PTHR11017 97 195 1.5E-16 T 26-04-2016 smi_0289 2c04a407d1f3485c2da3552ecb8ac6c4 404 PANTHER PTHR11751 16 401 1.4E-173 T 26-04-2016 smi_0289 2c04a407d1f3485c2da3552ecb8ac6c4 404 Gene3D G3DSA:3.90.1150.10 283 403 2.6E-37 T 26-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 smi_0289 2c04a407d1f3485c2da3552ecb8ac6c4 404 PANTHER PTHR11751:SF370 16 401 1.4E-173 T 26-04-2016 smi_0289 2c04a407d1f3485c2da3552ecb8ac6c4 404 Gene3D G3DSA:3.40.640.10 51 282 1.9E-63 T 26-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 smi_0289 2c04a407d1f3485c2da3552ecb8ac6c4 404 SUPERFAMILY SSF53383 7 402 1.63E-90 T 26-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase smi_0289 2c04a407d1f3485c2da3552ecb8ac6c4 404 Pfam PF00155 Aminotransferase class I and II 34 385 2.5E-45 T 26-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 smi_0740 f6e934c1071fd09e4c313f6b0e5aa321 243 Pfam PF03306 Alpha-acetolactate decarboxylase 11 231 1.9E-74 T 26-04-2016 IPR005128 Alpha-acetolactate decarboxylase GO:0045151|GO:0047605 KEGG: 00650+4.1.1.5|KEGG: 00660+4.1.1.5|MetaCyc: PWY-5939|UniPathway: UPA00626 smi_0740 f6e934c1071fd09e4c313f6b0e5aa321 243 PIRSF PIRSF001332 1 243 6.8E-96 T 26-04-2016 IPR005128 Alpha-acetolactate decarboxylase GO:0045151|GO:0047605 KEGG: 00650+4.1.1.5|KEGG: 00660+4.1.1.5|MetaCyc: PWY-5939|UniPathway: UPA00626 smi_0740 f6e934c1071fd09e4c313f6b0e5aa321 243 PANTHER PTHR35524 1 243 2.3E-82 T 26-04-2016 smi_0740 f6e934c1071fd09e4c313f6b0e5aa321 243 SUPERFAMILY SSF117856 11 243 1.15E-75 T 26-04-2016 smi_0740 f6e934c1071fd09e4c313f6b0e5aa321 243 Gene3D G3DSA:3.30.1330.80 10 112 3.6E-38 T 26-04-2016 smi_0740 f6e934c1071fd09e4c313f6b0e5aa321 243 Gene3D G3DSA:3.30.1330.80 113 209 7.1E-47 T 26-04-2016 smi_0740 f6e934c1071fd09e4c313f6b0e5aa321 243 TIGRFAM TIGR01252 acetolac_decarb: alpha-acetolactate decarboxylase 10 243 1.7E-87 T 26-04-2016 IPR005128 Alpha-acetolactate decarboxylase GO:0045151|GO:0047605 KEGG: 00650+4.1.1.5|KEGG: 00660+4.1.1.5|MetaCyc: PWY-5939|UniPathway: UPA00626 smi_1513 7eb57a031e3ed6643560159d92be3853 63 PANTHER PTHR34977 1 62 3.7E-13 T 26-04-2016 smi_1513 7eb57a031e3ed6643560159d92be3853 63 Gene3D G3DSA:1.10.1470.10 3 63 2.9E-19 T 26-04-2016 IPR008462 CsbD-like smi_1513 7eb57a031e3ed6643560159d92be3853 63 SUPERFAMILY SSF69047 3 59 4.45E-10 T 26-04-2016 IPR008462 CsbD-like smi_1513 7eb57a031e3ed6643560159d92be3853 63 Pfam PF05532 CsbD-like 3 52 5.4E-14 T 26-04-2016 IPR008462 CsbD-like smi_0183 8a6d25ac9b9f6059ae50d0654ccd5ef3 255 Gene3D G3DSA:3.60.21.10 1 235 1.5E-14 T 26-04-2016 IPR029052 Metallo-dependent phosphatase-like smi_0183 8a6d25ac9b9f6059ae50d0654ccd5ef3 255 SUPERFAMILY SSF56300 177 214 5.86E-17 T 26-04-2016 IPR029052 Metallo-dependent phosphatase-like smi_0183 8a6d25ac9b9f6059ae50d0654ccd5ef3 255 SUPERFAMILY SSF56300 1 130 5.86E-17 T 26-04-2016 IPR029052 Metallo-dependent phosphatase-like smi_0183 8a6d25ac9b9f6059ae50d0654ccd5ef3 255 Pfam PF00149 Calcineurin-like phosphoesterase 1 194 3.3E-9 T 26-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 smi_1582 84aef93939237ce14f38cd6ddfa8066d 233 Gene3D G3DSA:3.40.390.10 86 229 7.6E-21 T 26-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 smi_1582 84aef93939237ce14f38cd6ddfa8066d 233 SUPERFAMILY SSF55486 83 230 6.85E-26 T 26-04-2016 smi_1582 84aef93939237ce14f38cd6ddfa8066d 233 Pfam PF00413 Matrixin 103 229 4.1E-7 T 26-04-2016 IPR001818 Peptidase M10, metallopeptidase GO:0004222|GO:0006508|GO:0008270|GO:0031012 smi_1675 4d28ac03d46fc4e274a2463a372813c4 288 PANTHER PTHR22855:SF17 17 288 1.1E-138 T 26-04-2016 smi_1675 4d28ac03d46fc4e274a2463a372813c4 288 Gene3D G3DSA:3.90.226.10 27 283 1.3E-71 T 26-04-2016 IPR029045 ClpP/crotonase-like domain smi_1675 4d28ac03d46fc4e274a2463a372813c4 288 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 20 283 4.0E-104 T 26-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 smi_1675 4d28ac03d46fc4e274a2463a372813c4 288 SUPERFAMILY SSF52096 34 285 4.62E-73 T 26-04-2016 IPR029045 ClpP/crotonase-like domain smi_1675 4d28ac03d46fc4e274a2463a372813c4 288 PANTHER PTHR22855 17 288 1.1E-138 T 26-04-2016 smi_1675 4d28ac03d46fc4e274a2463a372813c4 288 Pfam PF01039 Carboxyl transferase domain 101 243 2.4E-16 T 26-04-2016 IPR000022 Carboxyl transferase KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 smi_1675 4d28ac03d46fc4e274a2463a372813c4 288 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 1 285 38.847 T 26-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 smi_1675 4d28ac03d46fc4e274a2463a372813c4 288 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 133 147 2.9E-36 T 26-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 smi_1675 4d28ac03d46fc4e274a2463a372813c4 288 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 233 244 2.9E-36 T 26-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 smi_1675 4d28ac03d46fc4e274a2463a372813c4 288 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 255 264 2.9E-36 T 26-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 smi_1675 4d28ac03d46fc4e274a2463a372813c4 288 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 204 221 2.9E-36 T 26-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 smi_1675 4d28ac03d46fc4e274a2463a372813c4 288 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 167 185 2.9E-36 T 26-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 smi_1995 b1e6990b993575138dcf6103ccaf086c 309 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 103 302 2.2E-13 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 smi_1995 b1e6990b993575138dcf6103ccaf086c 309 Gene3D G3DSA:1.10.3720.10 8 295 4.6E-42 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 smi_1995 b1e6990b993575138dcf6103ccaf086c 309 PANTHER PTHR30193 1 309 1.1E-115 T 26-04-2016 smi_1995 b1e6990b993575138dcf6103ccaf086c 309 PANTHER PTHR30193:SF19 1 309 1.1E-115 T 26-04-2016 smi_1995 b1e6990b993575138dcf6103ccaf086c 309 SUPERFAMILY SSF161098 62 294 6.67E-45 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 smi_0057.1 6894478a330b07ae40b9af055c92cde6 48 Pfam PF03047 COMC family 3 32 8.6E-7 T 26-04-2016 IPR004288 Competence protein, ComC GO:0005186 smi_1778 f3ea8038d133d4d964a54e224ef4b987 228 Pfam PF01381 Helix-turn-helix 7 58 3.6E-15 T 26-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 smi_1778 f3ea8038d133d4d964a54e224ef4b987 228 Gene3D G3DSA:2.10.109.10 109 223 2.1E-21 T 26-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain smi_1778 f3ea8038d133d4d964a54e224ef4b987 228 SUPERFAMILY SSF51306 106 222 2.75E-26 T 26-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C smi_1778 f3ea8038d133d4d964a54e224ef4b987 228 Pfam PF00717 Peptidase S24-like 143 208 2.0E-12 T 26-04-2016 IPR019759 Peptidase S24/S26A/S26B smi_1778 f3ea8038d133d4d964a54e224ef4b987 228 SMART SM00530 6 61 1.0E-13 T 26-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 smi_1778 f3ea8038d133d4d964a54e224ef4b987 228 Gene3D G3DSA:1.10.260.40 5 61 5.6E-18 T 26-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 smi_1778 f3ea8038d133d4d964a54e224ef4b987 228 SUPERFAMILY SSF47413 5 62 1.25E-14 T 26-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 smi_1901 87a0287eaafec2513997c7bf3f140ccb 93 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 26-04-2016 IPR020934 Ribosomal protein S19 conserved site GO:0003723 smi_1901 87a0287eaafec2513997c7bf3f140ccb 93 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 2.05E-23 T 26-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 smi_1901 87a0287eaafec2513997c7bf3f140ccb 93 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 2.05E-23 T 26-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 smi_1901 87a0287eaafec2513997c7bf3f140ccb 93 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 2.05E-23 T 26-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 smi_1901 87a0287eaafec2513997c7bf3f140ccb 93 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 25.494 T 26-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 smi_1901 87a0287eaafec2513997c7bf3f140ccb 93 Pfam PF00203 Ribosomal protein S19 3 83 1.3E-37 T 26-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 smi_1901 87a0287eaafec2513997c7bf3f140ccb 93 Gene3D G3DSA:3.30.860.10 1 92 7.8E-42 T 26-04-2016 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 smi_1901 87a0287eaafec2513997c7bf3f140ccb 93 SUPERFAMILY SSF54570 3 84 6.28E-35 T 26-04-2016 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 smi_1901 87a0287eaafec2513997c7bf3f140ccb 93 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 92 2.2E-47 T 26-04-2016 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 smi_1901 87a0287eaafec2513997c7bf3f140ccb 93 PIRSF PIRSF002144 1 93 2.9E-32 T 26-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 smi_1901 87a0287eaafec2513997c7bf3f140ccb 93 PANTHER PTHR11880 1 91 1.8E-54 T 26-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 smi_0084 44d77a869f300545ecd1f0957349908a 388 Pfam PF01380 SIS domain 57 191 1.4E-10 T 26-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 smi_0084 44d77a869f300545ecd1f0957349908a 388 Pfam PF01380 SIS domain 230 309 6.7E-8 T 26-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 smi_0084 44d77a869f300545ecd1f0957349908a 388 SUPERFAMILY SSF53697 17 377 8.12E-54 T 26-04-2016 smi_0084 44d77a869f300545ecd1f0957349908a 388 PANTHER PTHR32502:SF3 236 388 1.1E-200 T 26-04-2016 smi_0084 44d77a869f300545ecd1f0957349908a 388 PANTHER PTHR32502:SF3 1 186 1.1E-200 T 26-04-2016 smi_0084 44d77a869f300545ecd1f0957349908a 388 Gene3D G3DSA:3.40.50.10490 208 380 1.3E-53 T 26-04-2016 smi_0084 44d77a869f300545ecd1f0957349908a 388 Gene3D G3DSA:3.40.50.10490 1 200 1.5E-82 T 26-04-2016 smi_0084 44d77a869f300545ecd1f0957349908a 388 PANTHER PTHR32502 236 388 1.1E-200 T 26-04-2016 smi_0084 44d77a869f300545ecd1f0957349908a 388 PANTHER PTHR32502 1 186 1.1E-200 T 26-04-2016 smi_1386 1eaed9381da64ca1a4c896600a2cb8bd 148 Gene3D G3DSA:1.10.1660.10 41 102 3.8E-5 T 26-04-2016 smi_1386 1eaed9381da64ca1a4c896600a2cb8bd 148 Pfam PF08876 Domain of unknown function (DUF1836) 8 107 3.1E-38 T 26-04-2016 IPR014975 Protein of unknown function DUF1836 smi_1386 1eaed9381da64ca1a4c896600a2cb8bd 148 PANTHER PTHR40056 1 148 1.2E-47 T 26-04-2016 smi_1386 1eaed9381da64ca1a4c896600a2cb8bd 148 PANTHER PTHR40056:SF1 1 148 1.2E-47 T 26-04-2016 smi_1876 715399776367aa159c0431a6f65458ad 445 SUPERFAMILY SSF51998 2 440 2.38E-178 T 26-04-2016 smi_1876 715399776367aa159c0431a6f65458ad 445 Pfam PF05167 Uncharacterised ACR (DUF711) 12 409 3.1E-170 T 26-04-2016 IPR007841 Uncharacterised protein family UPF0210 smi_1876 715399776367aa159c0431a6f65458ad 445 PANTHER PTHR37560 1 445 2.1E-257 T 26-04-2016 smi_1876 715399776367aa159c0431a6f65458ad 445 PANTHER PTHR37560:SF2 1 445 2.1E-257 T 26-04-2016 smi_1876 715399776367aa159c0431a6f65458ad 445 Gene3D G3DSA:3.20.70.20 1 445 1.5E-216 T 26-04-2016 smi_1876 715399776367aa159c0431a6f65458ad 445 Hamap MF_01221 UPF0210 protein . 1 445 52.07 T 26-04-2016 IPR007841 Uncharacterised protein family UPF0210 smi_1400 bf58c3f984b429467007e1000b1127dd 396 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 3 395 56.412 T 26-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 smi_1400 bf58c3f984b429467007e1000b1127dd 396 PANTHER PTHR11964 1 393 3.8E-265 T 26-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 smi_1400 bf58c3f984b429467007e1000b1127dd 396 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 6 394 2.1E-176 T 26-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 smi_1400 bf58c3f984b429467007e1000b1127dd 396 SUPERFAMILY SSF55973 245 395 1.41E-67 T 26-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 smi_1400 bf58c3f984b429467007e1000b1127dd 396 Gene3D G3DSA:3.30.300.10 12 144 2.0E-43 T 26-04-2016 smi_1400 bf58c3f984b429467007e1000b1127dd 396 Pfam PF02772 S-adenosylmethionine synthetase, central domain 126 243 7.7E-49 T 26-04-2016 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 smi_1400 bf58c3f984b429467007e1000b1127dd 396 PIRSF PIRSF000497 1 396 7.8E-174 T 26-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 smi_1400 bf58c3f984b429467007e1000b1127dd 396 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 245 384 1.1E-67 T 26-04-2016 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 smi_1400 bf58c3f984b429467007e1000b1127dd 396 SUPERFAMILY SSF55973 124 244 1.06E-51 T 26-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 smi_1400 bf58c3f984b429467007e1000b1127dd 396 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 271 279 - T 26-04-2016 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 smi_1400 bf58c3f984b429467007e1000b1127dd 396 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 127 137 - T 26-04-2016 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 smi_1400 bf58c3f984b429467007e1000b1127dd 396 SUPERFAMILY SSF55973 5 110 3.41E-43 T 26-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 smi_1400 bf58c3f984b429467007e1000b1127dd 396 Gene3D G3DSA:3.30.300.10 256 395 1.8E-68 T 26-04-2016 smi_1400 bf58c3f984b429467007e1000b1127dd 396 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 5 102 2.1E-39 T 26-04-2016 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 smi_1400 bf58c3f984b429467007e1000b1127dd 396 Gene3D G3DSA:3.30.300.10 145 245 1.3E-48 T 26-04-2016 smi_0478 743ad8918b603eabdc9ace96907c43e2 318 Gene3D G3DSA:2.10.270.10 260 304 6.8E-14 T 26-04-2016 smi_0478 743ad8918b603eabdc9ace96907c43e2 318 Gene3D G3DSA:2.10.270.10 175 231 1.2E-16 T 26-04-2016 smi_0478 743ad8918b603eabdc9ace96907c43e2 318 Pfam PF01473 Putative cell wall binding repeat 259 278 8.7E-5 T 26-04-2016 IPR018337 Cell wall/choline-binding repeat smi_0478 743ad8918b603eabdc9ace96907c43e2 318 Pfam PF01473 Putative cell wall binding repeat 282 301 0.07 T 26-04-2016 IPR018337 Cell wall/choline-binding repeat smi_0478 743ad8918b603eabdc9ace96907c43e2 318 Pfam PF01473 Putative cell wall binding repeat 218 237 1.1E-5 T 26-04-2016 IPR018337 Cell wall/choline-binding repeat smi_0478 743ad8918b603eabdc9ace96907c43e2 318 Pfam PF01473 Putative cell wall binding repeat 198 215 6.0E-6 T 26-04-2016 IPR018337 Cell wall/choline-binding repeat smi_0478 743ad8918b603eabdc9ace96907c43e2 318 Pfam PF01473 Putative cell wall binding repeat 239 257 3.1E-5 T 26-04-2016 IPR018337 Cell wall/choline-binding repeat smi_0478 743ad8918b603eabdc9ace96907c43e2 318 Gene3D G3DSA:2.20.120.10 232 259 5.2E-18 T 26-04-2016 smi_0478 743ad8918b603eabdc9ace96907c43e2 318 SUPERFAMILY SSF69360 142 305 1.2E-44 T 26-04-2016 smi_0478 743ad8918b603eabdc9ace96907c43e2 318 SUPERFAMILY SSF69360 69 112 1.2E-44 T 26-04-2016 smi_0478 743ad8918b603eabdc9ace96907c43e2 318 SMART SM00644 12 151 6.1E-23 T 26-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 smi_0478 743ad8918b603eabdc9ace96907c43e2 318 PANTHER PTHR33308 41 288 4.2E-12 T 26-04-2016 smi_0825 8fe43d831e9501e2d1858aa955e08755 90 PANTHER PTHR12919 2 83 1.6E-43 T 26-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_0825 8fe43d831e9501e2d1858aa955e08755 90 Gene3D G3DSA:3.30.1320.10 2 84 3.9E-35 T 26-04-2016 IPR023803 Ribosomal protein S16 domain smi_0825 8fe43d831e9501e2d1858aa955e08755 90 SUPERFAMILY SSF54565 2 86 1.2E-33 T 26-04-2016 IPR023803 Ribosomal protein S16 domain smi_0825 8fe43d831e9501e2d1858aa955e08755 90 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 2 77 25.165 T 26-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_0825 8fe43d831e9501e2d1858aa955e08755 90 TIGRFAM TIGR00002 S16: ribosomal protein bS16 3 79 1.1E-34 T 26-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_0825 8fe43d831e9501e2d1858aa955e08755 90 Pfam PF00886 Ribosomal protein S16 9 67 4.0E-25 T 26-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_1755 6b5daae431c6d70a3588a3f0c1cea3e2 175 Gene3D G3DSA:3.40.50.450 1 173 1.4E-53 T 26-04-2016 smi_1755 6b5daae431c6d70a3588a3f0c1cea3e2 175 PANTHER PTHR38440 2 175 1.1E-42 T 26-04-2016 smi_1755 6b5daae431c6d70a3588a3f0c1cea3e2 175 Pfam PF06908 Protein of unknown function (DUF1273) 5 165 7.0E-54 T 26-04-2016 IPR010697 Protein of unknown function DUF1273 smi_1755 6b5daae431c6d70a3588a3f0c1cea3e2 175 SUPERFAMILY SSF102405 1 170 1.19E-46 T 26-04-2016 smi_1755 6b5daae431c6d70a3588a3f0c1cea3e2 175 PIRSF PIRSF021290 1 173 1.5E-57 T 26-04-2016 IPR010697 Protein of unknown function DUF1273 smi_0745 2c286b5a33b3d00a8c52ae26b9567b8f 257 PANTHER PTHR30222 8 256 5.7E-71 T 26-04-2016 smi_0745 2c286b5a33b3d00a8c52ae26b9567b8f 257 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 74 244 1.3E-15 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 smi_0745 2c286b5a33b3d00a8c52ae26b9567b8f 257 SUPERFAMILY SSF161098 4 249 4.32E-46 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 smi_0745 2c286b5a33b3d00a8c52ae26b9567b8f 257 PANTHER PTHR30222:SF1 8 256 5.7E-71 T 26-04-2016 smi_0745 2c286b5a33b3d00a8c52ae26b9567b8f 257 Gene3D G3DSA:1.10.3720.10 2 255 1.4E-50 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 smi_0001 8d41ad8e180299aa9a7abbdf275658af 453 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 148 168 4.5E-49 T 26-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like smi_0001 8d41ad8e180299aa9a7abbdf275658af 453 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 412 431 4.5E-49 T 26-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like smi_0001 8d41ad8e180299aa9a7abbdf275658af 453 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 180 194 4.5E-49 T 26-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like smi_0001 8d41ad8e180299aa9a7abbdf275658af 453 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 247 274 4.5E-49 T 26-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like smi_0001 8d41ad8e180299aa9a7abbdf275658af 453 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 212 226 4.5E-49 T 26-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like smi_0001 8d41ad8e180299aa9a7abbdf275658af 453 Gene3D G3DSA:1.10.8.60 282 349 4.2E-21 T 26-04-2016 smi_0001 8d41ad8e180299aa9a7abbdf275658af 453 SUPERFAMILY SSF48295 359 453 4.45E-34 T 26-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 smi_0001 8d41ad8e180299aa9a7abbdf275658af 453 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 363 431 7.0E-30 T 26-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 smi_0001 8d41ad8e180299aa9a7abbdf275658af 453 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 7 452 4.0E-154 T 26-04-2016 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 smi_0001 8d41ad8e180299aa9a7abbdf275658af 453 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 4 453 30.917 T 26-04-2016 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 smi_0001 8d41ad8e180299aa9a7abbdf275658af 453 PANTHER PTHR30050:SF2 2 453 8.9E-187 T 26-04-2016 smi_0001 8d41ad8e180299aa9a7abbdf275658af 453 ProSitePatterns PS01008 DnaA protein signature. 412 431 - T 26-04-2016 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 smi_0001 8d41ad8e180299aa9a7abbdf275658af 453 SMART SM00760 362 431 5.5E-40 T 26-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 smi_0001 8d41ad8e180299aa9a7abbdf275658af 453 Gene3D G3DSA:3.40.50.300 112 280 6.1E-56 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0001 8d41ad8e180299aa9a7abbdf275658af 453 SUPERFAMILY SSF52540 115 327 9.08E-43 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0001 8d41ad8e180299aa9a7abbdf275658af 453 Gene3D G3DSA:1.10.1750.10 357 453 1.8E-38 T 26-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 smi_0001 8d41ad8e180299aa9a7abbdf275658af 453 Pfam PF00308 Bacterial dnaA protein 115 331 4.9E-82 T 26-04-2016 IPR013317 Chromosomal replication initiator protein DnaA smi_0001 8d41ad8e180299aa9a7abbdf275658af 453 PANTHER PTHR30050 2 453 8.9E-187 T 26-04-2016 smi_0001 8d41ad8e180299aa9a7abbdf275658af 453 SMART SM00382 147 279 4.8E-10 T 26-04-2016 IPR003593 AAA+ ATPase domain smi_0464 8914d4f09ff54e775f0a30bad42db250 321 SUPERFAMILY SSF69279 25 149 5.95E-6 T 26-04-2016 smi_1725 0b28e1f3e3d90b6ab68dc46e968375b8 404 Gene3D G3DSA:2.10.270.10 138 213 1.2E-5 T 26-04-2016 smi_1725 0b28e1f3e3d90b6ab68dc46e968375b8 404 Gene3D G3DSA:2.10.270.10 214 286 1.2E-8 T 26-04-2016 smi_1725 0b28e1f3e3d90b6ab68dc46e968375b8 404 PANTHER PTHR33308 142 272 6.2E-37 T 26-04-2016 smi_1725 0b28e1f3e3d90b6ab68dc46e968375b8 404 PANTHER PTHR33308:SF3 142 272 6.2E-37 T 26-04-2016 smi_1725 0b28e1f3e3d90b6ab68dc46e968375b8 404 SUPERFAMILY SSF69360 139 285 2.94E-22 T 26-04-2016 smi_1897 edad59c893ebb760e4fa3c3ef13c3c58 68 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 67 16.804 T 26-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_1897 edad59c893ebb760e4fa3c3ef13c3c58 68 SUPERFAMILY SSF46561 11 66 3.4E-20 T 26-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_1897 edad59c893ebb760e4fa3c3ef13c3c58 68 ProSitePatterns PS00579 Ribosomal protein L29 signature. 46 60 - T 26-04-2016 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_1897 edad59c893ebb760e4fa3c3ef13c3c58 68 TIGRFAM TIGR00012 L29: ribosomal protein uL29 12 66 8.1E-24 T 26-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_1897 edad59c893ebb760e4fa3c3ef13c3c58 68 PANTHER PTHR10916 1 66 3.8E-24 T 26-04-2016 smi_1897 edad59c893ebb760e4fa3c3ef13c3c58 68 Gene3D G3DSA:1.10.287.310 10 67 7.9E-26 T 26-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_1897 edad59c893ebb760e4fa3c3ef13c3c58 68 PANTHER PTHR10916:SF0 1 66 3.8E-24 T 26-04-2016 smi_1897 edad59c893ebb760e4fa3c3ef13c3c58 68 Pfam PF00831 Ribosomal L29 protein 11 66 1.1E-23 T 26-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_1631 924634e1cfb838cf8ada55493d8cad86 556 SUPERFAMILY SSF52540 116 179 1.87E-10 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1631 924634e1cfb838cf8ada55493d8cad86 556 SUPERFAMILY SSF52540 204 300 1.87E-10 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1631 924634e1cfb838cf8ada55493d8cad86 556 Gene3D G3DSA:3.40.50.300 117 293 6.5E-8 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1631 924634e1cfb838cf8ada55493d8cad86 556 Pfam PF07693 KAP family P-loop domain 127 197 3.2E-6 T 26-04-2016 IPR011646 KAP family P-loop domain smi_0273 4cc040a7c25bf221dac5cfe46b7e7ab9 270 Pfam PF03609 PTS system sorbose-specific iic component 6 241 4.7E-68 T 26-04-2016 IPR004700 Phosphotransferase system, sorbose-specific IIC subunit GO:0009401|GO:0016021 smi_0273 4cc040a7c25bf221dac5cfe46b7e7ab9 270 PANTHER PTHR32502:SF10 1 270 2.0E-148 T 26-04-2016 smi_0273 4cc040a7c25bf221dac5cfe46b7e7ab9 270 PANTHER PTHR32502 1 270 2.0E-148 T 26-04-2016 smi_0089 cc6a3f5a2990669de99575e9f0173f86 221 SUPERFAMILY SSF51735 5 135 1.58E-32 T 26-04-2016 IPR016040 NAD(P)-binding domain smi_0089 cc6a3f5a2990669de99575e9f0173f86 221 Gene3D G3DSA:3.40.50.720 4 139 4.4E-35 T 26-04-2016 IPR016040 NAD(P)-binding domain smi_0089 cc6a3f5a2990669de99575e9f0173f86 221 Gene3D G3DSA:3.30.70.1450 147 216 7.3E-6 T 26-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 smi_0089 cc6a3f5a2990669de99575e9f0173f86 221 Pfam PF02254 TrkA-N domain 8 121 3.1E-27 T 26-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 smi_0089 cc6a3f5a2990669de99575e9f0173f86 221 PANTHER PTHR16254 8 160 9.1E-39 T 26-04-2016 smi_0089 cc6a3f5a2990669de99575e9f0173f86 221 SUPERFAMILY SSF116726 132 218 6.15E-10 T 26-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 smi_1711 c6e0d6bee17be9551a1ff501b9b06df8 244 Pfam PF08241 Methyltransferase domain 47 141 4.1E-25 T 26-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 smi_1711 c6e0d6bee17be9551a1ff501b9b06df8 244 Gene3D G3DSA:3.40.50.150 3 217 8.5E-42 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase smi_1711 c6e0d6bee17be9551a1ff501b9b06df8 244 SUPERFAMILY SSF53335 4 242 8.96E-47 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase smi_1711 c6e0d6bee17be9551a1ff501b9b06df8 244 PANTHER PTHR10108:SF877 192 222 1.0E-54 T 26-04-2016 smi_1711 c6e0d6bee17be9551a1ff501b9b06df8 244 PANTHER PTHR10108:SF877 1 172 1.0E-54 T 26-04-2016 smi_1711 c6e0d6bee17be9551a1ff501b9b06df8 244 PANTHER PTHR10108 192 222 1.0E-54 T 26-04-2016 smi_1711 c6e0d6bee17be9551a1ff501b9b06df8 244 PANTHER PTHR10108 1 172 1.0E-54 T 26-04-2016 smi_0326 05f687503e51c3417d491ec7bf395fdd 308 Pfam PF00005 ABC transporter 25 178 4.6E-29 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 smi_0326 05f687503e51c3417d491ec7bf395fdd 308 PANTHER PTHR24220:SF336 7 276 8.3E-136 T 26-04-2016 smi_0326 05f687503e51c3417d491ec7bf395fdd 308 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 230 276 1.1E-8 T 26-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 smi_0326 05f687503e51c3417d491ec7bf395fdd 308 SUPERFAMILY SSF52540 5 250 1.73E-69 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0326 05f687503e51c3417d491ec7bf395fdd 308 Gene3D G3DSA:3.40.50.300 2 258 8.6E-80 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0326 05f687503e51c3417d491ec7bf395fdd 308 ProSitePatterns PS00211 ABC transporters family signature. 151 165 - T 26-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 smi_0326 05f687503e51c3417d491ec7bf395fdd 308 SMART SM00382 34 228 2.0E-13 T 26-04-2016 IPR003593 AAA+ ATPase domain smi_0326 05f687503e51c3417d491ec7bf395fdd 308 PANTHER PTHR24220 7 276 8.3E-136 T 26-04-2016 smi_1759 407f02ae02c3edb5d786010393da7bad 366 PANTHER PTHR21197 1 362 2.0E-111 T 26-04-2016 IPR004379 UDP-galactopyranose mutase GO:0008767 KEGG: 00052+5.4.99.9|KEGG: 00520+5.4.99.9|MetaCyc: PWY-6397|MetaCyc: PWY-7328|MetaCyc: PWY-7622 smi_1759 407f02ae02c3edb5d786010393da7bad 366 Gene3D G3DSA:3.40.50.720 321 363 2.8E-44 T 26-04-2016 IPR016040 NAD(P)-binding domain smi_1759 407f02ae02c3edb5d786010393da7bad 366 Gene3D G3DSA:3.40.50.720 181 254 2.8E-44 T 26-04-2016 IPR016040 NAD(P)-binding domain smi_1759 407f02ae02c3edb5d786010393da7bad 366 Gene3D G3DSA:3.40.50.720 1 78 2.8E-44 T 26-04-2016 IPR016040 NAD(P)-binding domain smi_1759 407f02ae02c3edb5d786010393da7bad 366 Pfam PF13450 NAD(P)-binding Rossmann-like domain 6 72 3.2E-20 T 26-04-2016 smi_1759 407f02ae02c3edb5d786010393da7bad 366 Pfam PF03275 UDP-galactopyranose mutase 146 346 5.9E-85 T 26-04-2016 IPR015899 UDP-galactopyranose mutase, C-terminal GO:0008767 KEGG: 00052+5.4.99.9|KEGG: 00520+5.4.99.9|MetaCyc: PWY-6397|MetaCyc: PWY-7328|MetaCyc: PWY-7622 smi_1759 407f02ae02c3edb5d786010393da7bad 366 SUPERFAMILY SSF51971 1 263 7.06E-52 T 26-04-2016 smi_1759 407f02ae02c3edb5d786010393da7bad 366 SUPERFAMILY SSF51971 331 361 7.06E-52 T 26-04-2016 smi_1759 407f02ae02c3edb5d786010393da7bad 366 TIGRFAM TIGR00031 UDP-GALP_mutase: UDP-galactopyranose mutase 1 364 3.1E-133 T 26-04-2016 IPR004379 UDP-galactopyranose mutase GO:0008767 KEGG: 00052+5.4.99.9|KEGG: 00520+5.4.99.9|MetaCyc: PWY-6397|MetaCyc: PWY-7328|MetaCyc: PWY-7622 smi_1759 407f02ae02c3edb5d786010393da7bad 366 SUPERFAMILY SSF54373 245 313 4.51E-27 T 26-04-2016 smi_1900 5eeb7d59ff8fb47363cea36539f06098 114 ProSitePatterns PS00464 Ribosomal protein L22 signature. 87 111 - T 26-04-2016 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_1900 5eeb7d59ff8fb47363cea36539f06098 114 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 5 114 29.569 T 26-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 smi_1900 5eeb7d59ff8fb47363cea36539f06098 114 PANTHER PTHR13501 1 113 6.0E-48 T 26-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 smi_1900 5eeb7d59ff8fb47363cea36539f06098 114 Gene3D G3DSA:3.90.470.10 6 114 1.9E-43 T 26-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 smi_1900 5eeb7d59ff8fb47363cea36539f06098 114 SUPERFAMILY SSF54843 6 114 1.7E-43 T 26-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 smi_1900 5eeb7d59ff8fb47363cea36539f06098 114 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 9 111 1.4E-44 T 26-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 smi_1900 5eeb7d59ff8fb47363cea36539f06098 114 Pfam PF00237 Ribosomal protein L22p/L17e 12 111 9.9E-34 T 26-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 smi_1271 1afa08547846307eb49d82217a520abb 80 SUPERFAMILY SSF143800 1 79 1.29E-24 T 26-04-2016 smi_1271 1afa08547846307eb49d82217a520abb 80 ProSitePatterns PS01143 Ribosomal protein L31 signature. 48 69 - T 26-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_1271 1afa08547846307eb49d82217a520abb 80 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 79 2.9E-20 T 26-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_1271 1afa08547846307eb49d82217a520abb 80 Hamap MF_00502 50S ribosomal protein L31 type B [rpmE2]. 1 80 27.385 T 26-04-2016 IPR027493 Ribosomal protein L31 type B GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_1271 1afa08547846307eb49d82217a520abb 80 Pfam PF01197 Ribosomal protein L31 1 78 1.2E-29 T 26-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_1271 1afa08547846307eb49d82217a520abb 80 PANTHER PTHR33280 1 79 4.0E-36 T 26-04-2016 smi_1271 1afa08547846307eb49d82217a520abb 80 PRINTS PR01249 Ribosomal protein L31 signature 2 19 3.6E-20 T 26-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_1271 1afa08547846307eb49d82217a520abb 80 PRINTS PR01249 Ribosomal protein L31 signature 59 77 3.6E-20 T 26-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_1271 1afa08547846307eb49d82217a520abb 80 PRINTS PR01249 Ribosomal protein L31 signature 44 59 3.6E-20 T 26-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_1174 6b4c87ec9c4e218c0eafe493b84d067e 115 TIGRFAM TIGR01295 PedC_BrcD: putative bacteriocin transport accessory protein 4 113 2.2E-44 T 26-04-2016 IPR005985 Bacteriocin transport accessory protein GO:0030152 smi_1174 6b4c87ec9c4e218c0eafe493b84d067e 115 Gene3D G3DSA:3.40.30.10 2 112 1.4E-36 T 26-04-2016 IPR012336 Thioredoxin-like fold smi_1174 6b4c87ec9c4e218c0eafe493b84d067e 115 SUPERFAMILY SSF52833 3 112 6.77E-27 T 26-04-2016 IPR012336 Thioredoxin-like fold smi_0343 e04fe3bd8813c513b4f87ab27748f029 98 Gene3D G3DSA:1.20.1470.10 7 90 4.1E-6 T 26-04-2016 smi_0343 e04fe3bd8813c513b4f87ab27748f029 98 SUPERFAMILY SSF109797 6 95 1.8E-8 T 26-04-2016 smi_1752 5682bcc6decfeab4e9d53b6b49d16b09 385 PANTHER PTHR18895 47 223 3.8E-107 T 26-04-2016 smi_1752 5682bcc6decfeab4e9d53b6b49d16b09 385 PANTHER PTHR18895 258 383 3.8E-107 T 26-04-2016 smi_1752 5682bcc6decfeab4e9d53b6b49d16b09 385 SUPERFAMILY SSF53335 146 222 4.53E-35 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase smi_1752 5682bcc6decfeab4e9d53b6b49d16b09 385 SUPERFAMILY SSF53335 259 375 4.53E-35 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase smi_1752 5682bcc6decfeab4e9d53b6b49d16b09 385 SMART SM00981 58 159 8.9E-10 T 26-04-2016 IPR004114 THUMP domain GO:0003723 smi_1752 5682bcc6decfeab4e9d53b6b49d16b09 385 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 304 310 - T 26-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 smi_1752 5682bcc6decfeab4e9d53b6b49d16b09 385 Gene3D G3DSA:3.40.50.150 149 219 7.4E-30 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase smi_1752 5682bcc6decfeab4e9d53b6b49d16b09 385 Gene3D G3DSA:3.40.50.150 256 378 7.4E-30 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase smi_1752 5682bcc6decfeab4e9d53b6b49d16b09 385 Pfam PF01170 Putative RNA methylase family UPF0020 167 371 1.2E-53 T 26-04-2016 IPR000241 Putative RNA methylase domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 smi_1752 5682bcc6decfeab4e9d53b6b49d16b09 385 Pfam PF02926 THUMP domain 20 159 4.2E-8 T 26-04-2016 IPR004114 THUMP domain GO:0003723 smi_1752 5682bcc6decfeab4e9d53b6b49d16b09 385 PANTHER PTHR18895:SF62 47 223 3.8E-107 T 26-04-2016 smi_1752 5682bcc6decfeab4e9d53b6b49d16b09 385 PANTHER PTHR18895:SF62 258 383 3.8E-107 T 26-04-2016 smi_1752 5682bcc6decfeab4e9d53b6b49d16b09 385 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 301 313 7.0E-5 T 26-04-2016 smi_1752 5682bcc6decfeab4e9d53b6b49d16b09 385 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 198 212 7.0E-5 T 26-04-2016 smi_0200 29706ed4c4c65b9b17780a8c53d6c81e 605 SUPERFAMILY SSF52266 418 591 4.58E-7 T 26-04-2016 IPR013830 SGNH hydrolase-type esterase domain smi_0200 29706ed4c4c65b9b17780a8c53d6c81e 605 Gene3D G3DSA:3.40.50.1110 432 574 1.3E-4 T 26-04-2016 IPR013830 SGNH hydrolase-type esterase domain smi_0200 29706ed4c4c65b9b17780a8c53d6c81e 605 Pfam PF01757 Acyltransferase family 4 336 5.4E-17 T 26-04-2016 IPR002656 Acyltransferase 3 GO:0016747 smi_0200 29706ed4c4c65b9b17780a8c53d6c81e 605 PANTHER PTHR23028 2 350 4.0E-59 T 26-04-2016 smi_0200 29706ed4c4c65b9b17780a8c53d6c81e 605 PANTHER PTHR23028:SF53 2 350 4.0E-59 T 26-04-2016 smi_0078 e727fc3e4a1d7d60d1711c552de9e936 238 SMART SM00866 85 228 2.1E-11 T 26-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 smi_0078 e727fc3e4a1d7d60d1711c552de9e936 238 SMART SM00345 9 68 4.9E-16 T 26-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 smi_0078 e727fc3e4a1d7d60d1711c552de9e936 238 PANTHER PTHR11751 112 135 1.1E-38 T 26-04-2016 smi_0078 e727fc3e4a1d7d60d1711c552de9e936 238 PANTHER PTHR11751 1 70 1.1E-38 T 26-04-2016 smi_0078 e727fc3e4a1d7d60d1711c552de9e936 238 PANTHER PTHR11751:SF354 112 135 1.1E-38 T 26-04-2016 smi_0078 e727fc3e4a1d7d60d1711c552de9e936 238 PANTHER PTHR11751:SF354 1 70 1.1E-38 T 26-04-2016 smi_0078 e727fc3e4a1d7d60d1711c552de9e936 238 Pfam PF00392 Bacterial regulatory proteins, gntR family 6 68 1.5E-16 T 26-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 smi_0078 e727fc3e4a1d7d60d1711c552de9e936 238 Pfam PF07702 UTRA domain 92 228 6.0E-16 T 26-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 smi_0078 e727fc3e4a1d7d60d1711c552de9e936 238 SUPERFAMILY SSF46785 3 76 7.03E-19 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain smi_0078 e727fc3e4a1d7d60d1711c552de9e936 238 Gene3D G3DSA:1.10.10.10 3 64 1.1E-22 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain smi_0078 e727fc3e4a1d7d60d1711c552de9e936 238 SUPERFAMILY SSF64288 56 231 6.44E-22 T 26-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain smi_0078 e727fc3e4a1d7d60d1711c552de9e936 238 Gene3D G3DSA:3.40.1410.10 65 233 6.0E-25 T 26-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain smi_0972 7888a2d3b1aef40503ba100376e910ce 201 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 2 198 24.511 T 26-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 smi_0972 7888a2d3b1aef40503ba100376e910ce 201 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 4 188 7.1E-52 T 26-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 smi_0972 7888a2d3b1aef40503ba100376e910ce 201 Pfam PF01121 Dephospho-CoA kinase 4 181 1.2E-49 T 26-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 smi_0972 7888a2d3b1aef40503ba100376e910ce 201 PANTHER PTHR10695 4 193 1.7E-63 T 26-04-2016 smi_0972 7888a2d3b1aef40503ba100376e910ce 201 Gene3D G3DSA:3.40.50.300 3 194 2.5E-64 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0972 7888a2d3b1aef40503ba100376e910ce 201 SUPERFAMILY SSF52540 1 191 1.05E-35 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0597 798a296d97d09a602d2dc87d6e6443ce 253 PANTHER PTHR33055 199 250 2.8E-20 T 26-04-2016 smi_0597 798a296d97d09a602d2dc87d6e6443ce 253 PANTHER PTHR33055 5 161 2.8E-20 T 26-04-2016 smi_0597 798a296d97d09a602d2dc87d6e6443ce 253 PANTHER PTHR33055:SF3 199 250 2.8E-20 T 26-04-2016 smi_0597 798a296d97d09a602d2dc87d6e6443ce 253 PANTHER PTHR33055:SF3 5 161 2.8E-20 T 26-04-2016 smi_0597 798a296d97d09a602d2dc87d6e6443ce 253 Pfam PF01548 Transposase 9 157 2.9E-25 T 26-04-2016 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 smi_0229 f05ab9046d15833f11847bc79d4ea010 147 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 5 135 8.4E-28 T 26-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily smi_0229 f05ab9046d15833f11847bc79d4ea010 147 PANTHER PTHR11717 1 141 3.9E-36 T 26-04-2016 smi_0229 f05ab9046d15833f11847bc79d4ea010 147 SUPERFAMILY SSF52788 1 138 7.59E-40 T 26-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily smi_0229 f05ab9046d15833f11847bc79d4ea010 147 Gene3D G3DSA:3.40.50.270 1 141 3.0E-42 T 26-04-2016 smi_0229 f05ab9046d15833f11847bc79d4ea010 147 SMART SM00226 2 137 1.6E-26 T 26-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily smi_0229 f05ab9046d15833f11847bc79d4ea010 147 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 76 91 4.4E-13 T 26-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 smi_0229 f05ab9046d15833f11847bc79d4ea010 147 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 111 126 4.4E-13 T 26-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 smi_0229 f05ab9046d15833f11847bc79d4ea010 147 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 4 21 4.4E-13 T 26-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 smi_0770 c231984f4132b11b56c6915a3e70aba7 489 Pfam PF14296 O-antigen polysaccharide polymerase Wzy 12 477 3.8E-143 T 26-04-2016 IPR029468 O-antigen polysaccharide polymerase Wzy UniPathway: UPA00934 smi_0770 c231984f4132b11b56c6915a3e70aba7 489 TIGRFAM TIGR04370 glyco_rpt_poly: oligosaccharide repeat unit polymerase 51 462 1.7E-72 T 26-04-2016 smi_1111 f85677218de6717df92fa2e71f864b84 142 Gene3D G3DSA:3.40.630.30 11 140 2.8E-24 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase smi_1111 f85677218de6717df92fa2e71f864b84 142 Pfam PF00583 Acetyltransferase (GNAT) family 46 130 1.0E-12 T 26-04-2016 IPR000182 GNAT domain GO:0008080 smi_1111 f85677218de6717df92fa2e71f864b84 142 SUPERFAMILY SSF55729 12 138 2.44E-22 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase smi_1111 f85677218de6717df92fa2e71f864b84 142 PIRSF PIRSF000452 3 142 7.9E-39 T 26-04-2016 IPR024170 Aminoglycoside N6-acetyltransferase smi_0657 219382989f3253fbc2cab4bc1452e490 348 Pfam PF01032 FecCD transport family 25 339 1.3E-83 T 26-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 smi_0657 219382989f3253fbc2cab4bc1452e490 348 PANTHER PTHR30472 9 347 1.4E-109 T 26-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 smi_0657 219382989f3253fbc2cab4bc1452e490 348 Gene3D G3DSA:1.10.3470.10 11 345 9.2E-95 T 26-04-2016 IPR029022 ABC transporter, BtuC-like smi_0657 219382989f3253fbc2cab4bc1452e490 348 SUPERFAMILY SSF81345 12 339 1.07E-73 T 26-04-2016 IPR029022 ABC transporter, BtuC-like smi_0657 219382989f3253fbc2cab4bc1452e490 348 PANTHER PTHR30472:SF32 9 347 1.4E-109 T 26-04-2016 smi_1383 1bbc175a2ae62212874787789e762873 118 SUPERFAMILY SSF52833 3 110 1.08E-27 T 26-04-2016 IPR012336 Thioredoxin-like fold smi_1383 1bbc175a2ae62212874787789e762873 118 Gene3D G3DSA:3.40.30.10 1 111 4.7E-35 T 26-04-2016 IPR012336 Thioredoxin-like fold smi_1383 1bbc175a2ae62212874787789e762873 118 PANTHER PTHR30041:SF3 1 115 1.0E-36 T 26-04-2016 smi_1383 1bbc175a2ae62212874787789e762873 118 PANTHER PTHR30041 1 115 1.0E-36 T 26-04-2016 smi_1383 1bbc175a2ae62212874787789e762873 118 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 3 110 1.6E-29 T 26-04-2016 IPR006504 Transcriptional regulator Spx/MgsR smi_1383 1bbc175a2ae62212874787789e762873 118 Pfam PF03960 ArsC family 38 109 4.4E-11 T 26-04-2016 IPR006660 Arsenate reductase-like smi_0050 684d26f519743b142a40de3e48c6332d 336 PANTHER PTHR30106:SF1 1 335 3.6E-170 T 26-04-2016 smi_0050 684d26f519743b142a40de3e48c6332d 336 PANTHER PTHR30106 1 335 3.6E-170 T 26-04-2016 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 smi_0050 684d26f519743b142a40de3e48c6332d 336 Pfam PF03601 Conserved hypothetical protein 698 10 315 6.5E-99 T 26-04-2016 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 smi_1298 265b21794035ea889fc3ee1be91a5a5b 209 SMART SM00382 26 209 4.9E-11 T 26-04-2016 IPR003593 AAA+ ATPase domain smi_1298 265b21794035ea889fc3ee1be91a5a5b 209 SUPERFAMILY SSF52540 1 205 6.95E-63 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1298 265b21794035ea889fc3ee1be91a5a5b 209 Pfam PF00005 ABC transporter 17 162 1.6E-32 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 smi_1298 265b21794035ea889fc3ee1be91a5a5b 209 PANTHER PTHR24220:SF327 3 204 1.6E-83 T 26-04-2016 smi_1298 265b21794035ea889fc3ee1be91a5a5b 209 PANTHER PTHR24220 3 204 1.6E-83 T 26-04-2016 smi_1298 265b21794035ea889fc3ee1be91a5a5b 209 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 26-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 smi_1298 265b21794035ea889fc3ee1be91a5a5b 209 Gene3D G3DSA:3.40.50.300 1 204 1.5E-69 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0864 7e4877a2c6d024963bd7c612200ffc3f 150 ProSitePatterns PS00893 Nudix box signature. 48 69 - T 26-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 smi_0864 7e4877a2c6d024963bd7c612200ffc3f 150 SUPERFAMILY SSF55811 10 146 8.39E-32 T 26-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 smi_0864 7e4877a2c6d024963bd7c612200ffc3f 150 PRINTS PR00502 NUDIX hydrolase family signature 57 72 1.2E-6 T 26-04-2016 IPR020476 NUDIX hydrolase smi_0864 7e4877a2c6d024963bd7c612200ffc3f 150 PRINTS PR00502 NUDIX hydrolase family signature 43 57 1.2E-6 T 26-04-2016 IPR020476 NUDIX hydrolase smi_0864 7e4877a2c6d024963bd7c612200ffc3f 150 Pfam PF00293 NUDIX domain 20 135 6.3E-17 T 26-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 smi_0864 7e4877a2c6d024963bd7c612200ffc3f 150 PANTHER PTHR22769 18 150 2.8E-24 T 26-04-2016 smi_0864 7e4877a2c6d024963bd7c612200ffc3f 150 Gene3D G3DSA:3.90.79.10 3 147 4.0E-49 T 26-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 smi_0864 7e4877a2c6d024963bd7c612200ffc3f 150 PANTHER PTHR22769:SF35 18 150 2.8E-24 T 26-04-2016 smi_1833 c54f047d4466028fcd8329e1ea605f62 171 Gene3D G3DSA:1.20.144.10 20 168 5.1E-18 T 26-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase smi_1833 c54f047d4466028fcd8329e1ea605f62 171 SMART SM00014 61 169 9.5E-8 T 26-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase smi_1833 c54f047d4466028fcd8329e1ea605f62 171 PANTHER PTHR14969 29 171 9.6E-54 T 26-04-2016 smi_1833 c54f047d4466028fcd8329e1ea605f62 171 PANTHER PTHR14969:SF21 29 171 9.6E-54 T 26-04-2016 smi_1833 c54f047d4466028fcd8329e1ea605f62 171 SUPERFAMILY SSF48317 11 169 1.44E-19 T 26-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase smi_1833 c54f047d4466028fcd8329e1ea605f62 171 Pfam PF01569 PAP2 superfamily 63 170 2.7E-11 T 26-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase smi_1231 7c703665227185679ada6b01678ba67d 269 PANTHER PTHR13627 16 73 5.4E-41 T 26-04-2016 smi_1231 7c703665227185679ada6b01678ba67d 269 PANTHER PTHR13627 130 269 5.4E-41 T 26-04-2016 smi_1231 7c703665227185679ada6b01678ba67d 269 Pfam PF04991 LicD family 24 245 1.8E-59 T 26-04-2016 IPR007074 LicD family smi_1557 71fcad336a86d6f6e0fbd3bcefd37b7f 126 Gene3D G3DSA:3.30.1330.40 3 123 1.6E-48 T 26-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like smi_1557 71fcad336a86d6f6e0fbd3bcefd37b7f 126 PANTHER PTHR11803 1 126 3.2E-58 T 26-04-2016 IPR006175 YjgF/YER057c/UK114 family smi_1557 71fcad336a86d6f6e0fbd3bcefd37b7f 126 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 3 123 7.3E-54 T 26-04-2016 IPR006056 RidA family smi_1557 71fcad336a86d6f6e0fbd3bcefd37b7f 126 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 101 119 - T 26-04-2016 IPR019897 RidA, conserved site smi_1557 71fcad336a86d6f6e0fbd3bcefd37b7f 126 Pfam PF01042 Endoribonuclease L-PSP 8 124 2.3E-44 T 26-04-2016 IPR006175 YjgF/YER057c/UK114 family smi_1557 71fcad336a86d6f6e0fbd3bcefd37b7f 126 SUPERFAMILY SSF55298 2 125 3.46E-46 T 26-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like smi_0631 4151ddaa76bf4c603992c1906d75a26a 233 PANTHER PTHR24220 5 223 1.5E-97 T 26-04-2016 smi_0631 4151ddaa76bf4c603992c1906d75a26a 233 Gene3D G3DSA:3.40.50.300 3 216 2.0E-64 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0631 4151ddaa76bf4c603992c1906d75a26a 233 SUPERFAMILY SSF52540 4 218 5.97E-65 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0631 4151ddaa76bf4c603992c1906d75a26a 233 SMART SM00382 32 215 1.6E-15 T 26-04-2016 IPR003593 AAA+ ATPase domain smi_0631 4151ddaa76bf4c603992c1906d75a26a 233 PANTHER PTHR24220:SF577 5 223 1.5E-97 T 26-04-2016 smi_0631 4151ddaa76bf4c603992c1906d75a26a 233 Pfam PF00005 ABC transporter 25 166 1.8E-35 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 smi_0631 4151ddaa76bf4c603992c1906d75a26a 233 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 26-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 smi_0041 8f64e91ab90f891eea1cb346b134d36a 209 PANTHER PTHR33678 9 199 2.4E-28 T 26-04-2016 smi_0041 8f64e91ab90f891eea1cb346b134d36a 209 Pfam PF03050 Transposase IS66 family 6 153 2.1E-43 T 26-04-2016 IPR004291 Transposase, IS66 smi_0041 8f64e91ab90f891eea1cb346b134d36a 209 PANTHER PTHR33678:SF1 9 199 2.4E-28 T 26-04-2016 smi_0041 8f64e91ab90f891eea1cb346b134d36a 209 Pfam PF13817 IS66 C-terminal element 159 200 7.3E-9 T 26-04-2016 smi_1934 3280e242fe62615e0efa4d40ff2aaecd 152 Pfam PF11457 Protein of unknown function (DUF3021) 3 148 8.7E-32 T 26-04-2016 IPR021560 Protein of unknown function DUF3021 smi_1413 72e26e05509e890397900d265ea33c09 318 PANTHER PTHR30482:SF10 1 318 2.2E-126 T 26-04-2016 smi_1413 72e26e05509e890397900d265ea33c09 318 Pfam PF02653 Branched-chain amino acid transport system / permease component 37 289 3.6E-40 T 26-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 smi_1413 72e26e05509e890397900d265ea33c09 318 PANTHER PTHR30482 1 318 2.2E-126 T 26-04-2016 smi_1053 1f90f58e41856c76b57f3c91c2a24554 52 Gene3D G3DSA:3.40.50.510 1 50 7.4E-9 T 26-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 smi_1053 1f90f58e41856c76b57f3c91c2a24554 52 SUPERFAMILY SSF53062 1 48 7.85E-6 T 26-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 smi_0377 57911d40ca543317a986e78585f103dd 97 PANTHER PTHR34215:SF1 1 93 1.6E-31 T 26-04-2016 smi_0377 57911d40ca543317a986e78585f103dd 97 SUPERFAMILY SSF64376 4 95 8.11E-28 T 26-04-2016 IPR007393 Domain of unknown function DUF448 smi_0377 57911d40ca543317a986e78585f103dd 97 Gene3D G3DSA:3.30.1230.10 1 95 1.1E-32 T 26-04-2016 IPR007393 Domain of unknown function DUF448 smi_0377 57911d40ca543317a986e78585f103dd 97 PANTHER PTHR34215 1 93 1.6E-31 T 26-04-2016 smi_0377 57911d40ca543317a986e78585f103dd 97 Pfam PF04296 Protein of unknown function (DUF448) 9 82 4.1E-22 T 26-04-2016 IPR007393 Domain of unknown function DUF448 smi_0080 aaa8205acc471b59c20d5dfe796bb040 158 Gene3D G3DSA:3.40.35.10 1 158 2.6E-55 T 26-04-2016 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 smi_0080 aaa8205acc471b59c20d5dfe796bb040 158 SUPERFAMILY SSF52728 1 157 3.4E-52 T 26-04-2016 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 smi_0080 aaa8205acc471b59c20d5dfe796bb040 158 PANTHER PTHR33799:SF2 1 158 4.9E-111 T 26-04-2016 smi_0080 aaa8205acc471b59c20d5dfe796bb040 158 Pfam PF03830 PTS system sorbose subfamily IIB component 3 149 5.8E-49 T 26-04-2016 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 smi_0080 aaa8205acc471b59c20d5dfe796bb040 158 PANTHER PTHR33799 1 158 4.9E-111 T 26-04-2016 smi_0877 5b0c7d0ec73b603c3e7f66c10098ebe7 427 Gene3D G3DSA:1.10.3080.10 11 421 1.4E-41 T 26-04-2016 IPR014743 Chloride channel, core GO:0005216|GO:0055085 smi_0877 5b0c7d0ec73b603c3e7f66c10098ebe7 427 Pfam PF00654 Voltage gated chloride channel 75 406 3.5E-45 T 26-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 smi_0877 5b0c7d0ec73b603c3e7f66c10098ebe7 427 SUPERFAMILY SSF81340 4 417 2.62E-53 T 26-04-2016 IPR014743 Chloride channel, core GO:0005216|GO:0055085 smi_1105 7cc34e5ce014c92308375f0442eafeef 293 TIGRFAM TIGR00147 TIGR00147: lipid kinase, YegS/Rv2252/BmrU family 1 287 4.4E-47 T 26-04-2016 IPR005218 Diacylglycerol/lipid kinase smi_1105 7cc34e5ce014c92308375f0442eafeef 293 SMART SM00046 3 131 1.7E-8 T 26-04-2016 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 smi_1105 7cc34e5ce014c92308375f0442eafeef 293 Pfam PF00781 Diacylglycerol kinase catalytic domain 3 126 2.5E-30 T 26-04-2016 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 smi_1105 7cc34e5ce014c92308375f0442eafeef 293 PANTHER PTHR12358:SF33 1 293 4.0E-49 T 26-04-2016 smi_1105 7cc34e5ce014c92308375f0442eafeef 293 PANTHER PTHR12358 1 293 4.0E-49 T 26-04-2016 smi_1105 7cc34e5ce014c92308375f0442eafeef 293 SUPERFAMILY SSF111331 1 291 2.22E-63 T 26-04-2016 IPR016064 NAD kinase/diacylglycerol kinase-like domain smi_1105 7cc34e5ce014c92308375f0442eafeef 293 Gene3D G3DSA:3.40.50.10330 24 105 1.1E-6 T 26-04-2016 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 GO:0003951|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 smi_1292 a44b9f9a2e7c7414c3f79449d8b542d2 266 SUPERFAMILY SSF51445 54 249 1.37E-35 T 26-04-2016 IPR017853 Glycoside hydrolase superfamily smi_1292 a44b9f9a2e7c7414c3f79449d8b542d2 266 PANTHER PTHR34135 23 259 4.8E-58 T 26-04-2016 smi_1292 a44b9f9a2e7c7414c3f79449d8b542d2 266 Pfam PF01183 Glycosyl hydrolases family 25 98 239 7.5E-14 T 26-04-2016 IPR002053 Glycoside hydrolase, family 25 GO:0003796|GO:0009253|GO:0016998 smi_1292 a44b9f9a2e7c7414c3f79449d8b542d2 266 Gene3D G3DSA:3.20.20.80 52 247 4.9E-36 T 26-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 smi_1292 a44b9f9a2e7c7414c3f79449d8b542d2 266 PANTHER PTHR34135:SF2 23 259 4.8E-58 T 26-04-2016 smi_1596 936465b6c4ee9912f290d06120ab4f7e 294 SUPERFAMILY SSF55729 19 109 1.23E-11 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase smi_1596 936465b6c4ee9912f290d06120ab4f7e 294 PANTHER PTHR23091:SF220 122 280 1.1E-64 T 26-04-2016 smi_1596 936465b6c4ee9912f290d06120ab4f7e 294 Gene3D G3DSA:3.40.630.30 162 278 9.3E-22 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase smi_1596 936465b6c4ee9912f290d06120ab4f7e 294 Gene3D G3DSA:3.40.630.30 8 109 1.5E-11 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase smi_1596 936465b6c4ee9912f290d06120ab4f7e 294 PANTHER PTHR23091 122 280 1.1E-64 T 26-04-2016 smi_1596 936465b6c4ee9912f290d06120ab4f7e 294 SUPERFAMILY SSF55729 115 279 8.44E-22 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase smi_1596 936465b6c4ee9912f290d06120ab4f7e 294 Pfam PF13673 Acetyltransferase (GNAT) domain 183 281 3.1E-12 T 26-04-2016 IPR000182 GNAT domain GO:0008080 smi_1596 936465b6c4ee9912f290d06120ab4f7e 294 Pfam PF13673 Acetyltransferase (GNAT) domain 47 102 2.0E-6 T 26-04-2016 IPR000182 GNAT domain GO:0008080 smi_0680 6c8bdd94984edfd6cd63e822cdda1a3b 260 PANTHER PTHR21343:SF9 1 260 3.1E-119 T 26-04-2016 smi_0680 6c8bdd94984edfd6cd63e822cdda1a3b 260 Gene3D G3DSA:3.40.50.880 30 214 5.0E-18 T 26-04-2016 IPR029062 Class I glutamine amidotransferase-like smi_0680 6c8bdd94984edfd6cd63e822cdda1a3b 260 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 18 213 2.4E-46 T 26-04-2016 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 UniPathway: UPA00148 smi_0680 6c8bdd94984edfd6cd63e822cdda1a3b 260 PANTHER PTHR21343 1 260 3.1E-119 T 26-04-2016 smi_0680 6c8bdd94984edfd6cd63e822cdda1a3b 260 SUPERFAMILY SSF52317 33 206 5.7E-28 T 26-04-2016 IPR029062 Class I glutamine amidotransferase-like smi_0061 2f82372568540ae4f0fd5c20ecdee5fd 51 TIGRFAM TIGR03949 bact_IIb_cerein: class IIb bacteriocin, lactobin A/cerein 7B family 4 43 1.1E-8 T 26-04-2016 IPR023991 Bacteriocin, class IIb, lactobin A/cerein 7B family smi_1956 827987aab43277a19170a464afd20408 47 TIGRFAM TIGR01847 bacteriocin_sig: bacteriocin-type signal sequence 9 22 5.3E-4 T 26-04-2016 IPR010133 Bacteriocin-type signal sequence smi_0911 96589fef6008d46e30804498ba22b062 400 SUPERFAMILY SSF50249 277 361 2.22E-26 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold smi_0911 96589fef6008d46e30804498ba22b062 400 Gene3D G3DSA:2.40.50.140 194 274 1.7E-27 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold smi_0911 96589fef6008d46e30804498ba22b062 400 PRINTS PR00681 Ribosomal protein S1 signature 157 177 6.4E-38 T 26-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 smi_0911 96589fef6008d46e30804498ba22b062 400 PRINTS PR00681 Ribosomal protein S1 signature 128 145 6.4E-38 T 26-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 smi_0911 96589fef6008d46e30804498ba22b062 400 PRINTS PR00681 Ribosomal protein S1 signature 331 349 6.4E-38 T 26-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 smi_0911 96589fef6008d46e30804498ba22b062 400 PRINTS PR00681 Ribosomal protein S1 signature 17 35 6.4E-38 T 26-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 smi_0911 96589fef6008d46e30804498ba22b062 400 PRINTS PR00681 Ribosomal protein S1 signature 214 235 6.4E-38 T 26-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 smi_0911 96589fef6008d46e30804498ba22b062 400 PRINTS PR00681 Ribosomal protein S1 signature 292 311 6.4E-38 T 26-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 smi_0911 96589fef6008d46e30804498ba22b062 400 PRINTS PR00681 Ribosomal protein S1 signature 110 126 6.4E-38 T 26-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 smi_0911 96589fef6008d46e30804498ba22b062 400 SMART SM00316 277 348 5.3E-28 T 26-04-2016 IPR022967 RNA-binding domain, S1 smi_0911 96589fef6008d46e30804498ba22b062 400 SMART SM00316 105 173 3.9E-8 T 26-04-2016 IPR022967 RNA-binding domain, S1 smi_0911 96589fef6008d46e30804498ba22b062 400 SMART SM00316 192 262 4.2E-25 T 26-04-2016 IPR022967 RNA-binding domain, S1 smi_0911 96589fef6008d46e30804498ba22b062 400 SMART SM00316 15 91 5.7E-4 T 26-04-2016 IPR022967 RNA-binding domain, S1 smi_0911 96589fef6008d46e30804498ba22b062 400 SUPERFAMILY SSF50249 4 114 8.58E-12 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold smi_0911 96589fef6008d46e30804498ba22b062 400 SUPERFAMILY SSF50249 106 186 1.72E-13 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold smi_0911 96589fef6008d46e30804498ba22b062 400 Gene3D G3DSA:2.40.50.140 9 82 6.7E-11 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold smi_0911 96589fef6008d46e30804498ba22b062 400 Gene3D G3DSA:2.40.50.140 275 349 1.8E-31 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold smi_0911 96589fef6008d46e30804498ba22b062 400 Gene3D G3DSA:2.40.50.140 106 174 4.3E-14 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold smi_0911 96589fef6008d46e30804498ba22b062 400 PANTHER PTHR10724 118 389 2.0E-89 T 26-04-2016 smi_0911 96589fef6008d46e30804498ba22b062 400 SUPERFAMILY SSF50249 192 279 2.24E-24 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold smi_0911 96589fef6008d46e30804498ba22b062 400 Pfam PF00575 S1 RNA binding domain 106 173 1.8E-11 T 26-04-2016 IPR003029 S1 domain GO:0003676 smi_0911 96589fef6008d46e30804498ba22b062 400 Pfam PF00575 S1 RNA binding domain 14 74 6.2E-6 T 26-04-2016 IPR003029 S1 domain GO:0003676 smi_0911 96589fef6008d46e30804498ba22b062 400 Pfam PF00575 S1 RNA binding domain 190 262 1.1E-21 T 26-04-2016 IPR003029 S1 domain GO:0003676 smi_0911 96589fef6008d46e30804498ba22b062 400 Pfam PF00575 S1 RNA binding domain 275 348 4.0E-25 T 26-04-2016 IPR003029 S1 domain GO:0003676 smi_0610 cf89d08037d604e85217425ddcdcceef 95 Gene3D G3DSA:1.20.120.230 13 73 9.5E-5 T 26-04-2016 smi_0107 6000cb023ab04aa4938847fb41cdea52 388 SUPERFAMILY SSF53098 207 358 1.97E-9 T 26-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 smi_0107 6000cb023ab04aa4938847fb41cdea52 388 Pfam PF13936 Helix-turn-helix domain 4 47 1.4E-16 T 26-04-2016 IPR025246 Transposase IS30-like HTH domain smi_0107 6000cb023ab04aa4938847fb41cdea52 388 Gene3D G3DSA:3.30.420.10 209 358 9.8E-6 T 26-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 smi_0107 6000cb023ab04aa4938847fb41cdea52 388 PANTHER PTHR10948 1 372 3.3E-16 T 26-04-2016 smi_0302 12813ffafdf00d4fd511b1b098bd3e11 275 Pfam PF00156 Phosphoribosyl transferase domain 107 266 2.3E-27 T 26-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 smi_0302 12813ffafdf00d4fd511b1b098bd3e11 275 PANTHER PTHR11776:SF9 48 265 8.8E-119 T 26-04-2016 smi_0302 12813ffafdf00d4fd511b1b098bd3e11 275 SUPERFAMILY SSF46785 2 73 6.26E-24 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain smi_0302 12813ffafdf00d4fd511b1b098bd3e11 275 Gene3D G3DSA:1.10.10.10 1 73 2.5E-36 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain smi_0302 12813ffafdf00d4fd511b1b098bd3e11 275 TIGRFAM TIGR01743 purR_Bsub: pur operon repressor PurR 3 271 6.4E-133 T 26-04-2016 IPR010078 Pur operon repressor GO:0003677|GO:0045892|GO:0045982 smi_0302 12813ffafdf00d4fd511b1b098bd3e11 275 PANTHER PTHR11776 48 265 8.8E-119 T 26-04-2016 smi_0302 12813ffafdf00d4fd511b1b098bd3e11 275 ProDom PD029816 REPRESSOR OPERON PUR TRANSCRIPTION PURINE TRANSCRIPTIONAL PURR REGULATION DNA-BINDING GLYCOSYLTRANSFERASE 10 73 4.0E-30 T 26-04-2016 IPR015265 Bacterial purine repressor, N-terminal GO:0003677|GO:0006355 smi_0302 12813ffafdf00d4fd511b1b098bd3e11 275 Gene3D G3DSA:3.40.50.2020 82 266 7.3E-53 T 26-04-2016 IPR029057 Phosphoribosyltransferase-like smi_0302 12813ffafdf00d4fd511b1b098bd3e11 275 Pfam PF09182 Bacterial purine repressor, N-terminal 4 73 6.9E-28 T 26-04-2016 IPR015265 Bacterial purine repressor, N-terminal GO:0003677|GO:0006355 smi_0302 12813ffafdf00d4fd511b1b098bd3e11 275 SUPERFAMILY SSF53271 94 247 1.85E-34 T 26-04-2016 IPR029057 Phosphoribosyltransferase-like smi_2005 89768084246dbbbab54a21645cf90ede 498 Gene3D G3DSA:3.40.50.300 183 351 3.0E-21 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_2005 89768084246dbbbab54a21645cf90ede 498 SMART SM00885 44 169 7.5E-11 T 26-04-2016 IPR014818 Bacteriophage/plasmid primase, P4, C-terminal smi_2005 89768084246dbbbab54a21645cf90ede 498 SUPERFAMILY SSF52540 174 352 9.04E-19 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_2005 89768084246dbbbab54a21645cf90ede 498 TIGRFAM TIGR01613 primase_Cterm: phage/plasmid primase, P4 family, C-terminal domain 120 415 3.5E-94 T 26-04-2016 IPR006500 DNA primase, phage/plasmid smi_2005 89768084246dbbbab54a21645cf90ede 498 Pfam PF03288 Poxvirus D5 protein-like 373 461 7.1E-15 T 26-04-2016 IPR004968 DNA primase/nucleoside triphosphatase, C-terminal smi_0387 33cb824b60d168a25cc0e921d60b979c 186 SUPERFAMILY SSF55729 8 180 8.58E-44 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase smi_0387 33cb824b60d168a25cc0e921d60b979c 186 Gene3D G3DSA:3.40.630.30 7 184 1.1E-49 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase smi_0387 33cb824b60d168a25cc0e921d60b979c 186 PANTHER PTHR13256 1 184 2.4E-52 T 26-04-2016 smi_0387 33cb824b60d168a25cc0e921d60b979c 186 PANTHER PTHR13256:SF10 1 184 2.4E-52 T 26-04-2016 smi_0387 33cb824b60d168a25cc0e921d60b979c 186 Pfam PF13302 Acetyltransferase (GNAT) domain 14 155 9.5E-29 T 26-04-2016 IPR000182 GNAT domain GO:0008080 smi_1008 e54ef9aec46514738420d5d49475ce5a 247 TIGRFAM TIGR01076 sortase_fam: sortase 97 221 2.4E-19 T 26-04-2016 IPR005754 Sortase family smi_1008 e54ef9aec46514738420d5d49475ce5a 247 Gene3D G3DSA:2.40.260.10 85 226 6.0E-41 T 26-04-2016 IPR023365 Sortase domain smi_1008 e54ef9aec46514738420d5d49475ce5a 247 SUPERFAMILY SSF63817 29 223 1.18E-43 T 26-04-2016 IPR023365 Sortase domain smi_1008 e54ef9aec46514738420d5d49475ce5a 247 PANTHER PTHR33393 29 247 1.9E-67 T 26-04-2016 smi_1008 e54ef9aec46514738420d5d49475ce5a 247 PANTHER PTHR33393:SF3 29 247 1.9E-67 T 26-04-2016 smi_1008 e54ef9aec46514738420d5d49475ce5a 247 Pfam PF04203 Sortase family 98 222 4.5E-24 T 26-04-2016 IPR005754 Sortase family smi_1722 8fc6b8341629af5adec6cc33a16ee423 440 PRINTS PR00175 Sodium/alanine symporter signature 86 108 3.1E-56 T 26-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 smi_1722 8fc6b8341629af5adec6cc33a16ee423 440 PRINTS PR00175 Sodium/alanine symporter signature 406 426 3.1E-56 T 26-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 smi_1722 8fc6b8341629af5adec6cc33a16ee423 440 PRINTS PR00175 Sodium/alanine symporter signature 208 227 3.1E-56 T 26-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 smi_1722 8fc6b8341629af5adec6cc33a16ee423 440 PRINTS PR00175 Sodium/alanine symporter signature 303 321 3.1E-56 T 26-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 smi_1722 8fc6b8341629af5adec6cc33a16ee423 440 PRINTS PR00175 Sodium/alanine symporter signature 180 198 3.1E-56 T 26-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 smi_1722 8fc6b8341629af5adec6cc33a16ee423 440 PRINTS PR00175 Sodium/alanine symporter signature 347 369 3.1E-56 T 26-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 smi_1722 8fc6b8341629af5adec6cc33a16ee423 440 Pfam PF01235 Sodium:alanine symporter family 50 439 7.5E-146 T 26-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 smi_1722 8fc6b8341629af5adec6cc33a16ee423 440 TIGRFAM TIGR00835 agcS: amino acid carrier protein 13 437 1.3E-156 T 26-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 smi_1722 8fc6b8341629af5adec6cc33a16ee423 440 PANTHER PTHR30330 1 440 3.1E-222 T 26-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 smi_1722 8fc6b8341629af5adec6cc33a16ee423 440 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 86 101 - T 26-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 smi_1722 8fc6b8341629af5adec6cc33a16ee423 440 PANTHER PTHR30330:SF3 1 440 3.1E-222 T 26-04-2016 smi_1743 b5ef100195d07704557a5c5ddc5066de 232 Pfam PF09922 Cell wall-active antibiotics response 4TMS YvqF 114 229 1.7E-34 T 26-04-2016 IPR024425 Cell wall-active antibiotics response 4TMS YvqF smi_1743 b5ef100195d07704557a5c5ddc5066de 232 PIRSF PIRSF031509 1 232 5.4E-71 T 26-04-2016 IPR016975 Cell wall-active antibiotic response protein GO:0016021 smi_0400 a10643acb15809ae6ab1e3f9b04bed27 200 Pfam PF05066 HB1, ASXL, restriction endonuclease HTH domain 20 88 1.1E-7 T 26-04-2016 IPR007759 HB1/Asxl, restriction endonuclease HTH domain GO:0006351|GO:0006355 smi_0400 a10643acb15809ae6ab1e3f9b04bed27 200 PANTHER PTHR41322 7 200 1.3E-61 T 26-04-2016 smi_0400 a10643acb15809ae6ab1e3f9b04bed27 200 Hamap MF_00357 Probable DNA-directed RNA polymerase subunit delta [rpoE]. 14 195 16.685 T 26-04-2016 IPR029757 DNA-directed RNA polymerase subunit delta GO:0006351|GO:0006355 smi_0400 a10643acb15809ae6ab1e3f9b04bed27 200 TIGRFAM TIGR04567 RNAP_delt_lowGC: DNA-directed RNA polymerase delta subunit 18 98 4.9E-30 T 26-04-2016 IPR029757 DNA-directed RNA polymerase subunit delta GO:0006351|GO:0006355 smi_0993 e2b2b2aa4b0e6e39be2b39fdce1fe853 109 PANTHER PTHR13696 1 106 7.1E-23 T 26-04-2016 smi_0993 e2b2b2aa4b0e6e39be2b39fdce1fe853 109 SUPERFAMILY SSF117916 11 107 1.14E-28 T 26-04-2016 smi_0993 e2b2b2aa4b0e6e39be2b39fdce1fe853 109 Pfam PF01883 Domain of unknown function DUF59 12 86 4.3E-23 T 26-04-2016 IPR002744 Domain of unknown function DUF59 smi_0993 e2b2b2aa4b0e6e39be2b39fdce1fe853 109 PANTHER PTHR13696:SF62 1 106 7.1E-23 T 26-04-2016 smi_1301 a8a37945b90c31f17ea95c5e7b5c2fa5 388 Pfam PF01594 Domain of unknown function DUF20 34 366 1.2E-71 T 26-04-2016 IPR002549 Transmembrane protein TqsA-like smi_1301 a8a37945b90c31f17ea95c5e7b5c2fa5 388 PANTHER PTHR21716 44 372 1.6E-76 T 26-04-2016 IPR002549 Transmembrane protein TqsA-like smi_1301 a8a37945b90c31f17ea95c5e7b5c2fa5 388 PANTHER PTHR21716 8 28 1.6E-76 T 26-04-2016 IPR002549 Transmembrane protein TqsA-like smi_1041 b4b1ba25c3c9029127bb078bf391cc40 255 SUPERFAMILY SSF100950 78 235 2.41E-27 T 26-04-2016 smi_1041 b4b1ba25c3c9029127bb078bf391cc40 255 SMART SM00420 7 58 2.8E-15 T 26-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 smi_1041 b4b1ba25c3c9029127bb078bf391cc40 255 Pfam PF00455 DeoR C terminal sensor domain 78 234 1.4E-46 T 26-04-2016 IPR014036 DeoR C-terminal sensor domain smi_1041 b4b1ba25c3c9029127bb078bf391cc40 255 Gene3D G3DSA:1.10.10.10 9 55 4.8E-8 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain smi_1041 b4b1ba25c3c9029127bb078bf391cc40 255 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 4.5E-8 T 26-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 smi_1041 b4b1ba25c3c9029127bb078bf391cc40 255 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 4.5E-8 T 26-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 smi_1041 b4b1ba25c3c9029127bb078bf391cc40 255 PANTHER PTHR30363 1 246 2.3E-146 T 26-04-2016 smi_1041 b4b1ba25c3c9029127bb078bf391cc40 255 SMART SM01134 76 235 2.1E-61 T 26-04-2016 smi_1041 b4b1ba25c3c9029127bb078bf391cc40 255 SUPERFAMILY SSF46785 5 62 3.39E-13 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain smi_1041 b4b1ba25c3c9029127bb078bf391cc40 255 PANTHER PTHR30363:SF10 1 246 2.3E-146 T 26-04-2016 smi_1041 b4b1ba25c3c9029127bb078bf391cc40 255 Pfam PF08220 DeoR-like helix-turn-helix domain 8 59 1.0E-16 T 26-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 smi_1041 b4b1ba25c3c9029127bb078bf391cc40 255 Gene3D G3DSA:3.40.50.1360 78 214 2.2E-6 T 26-04-2016 smi_0883 fa840990ef281a32a8d1357fa8b48f70 306 PANTHER PTHR10285:SF7 268 306 2.1E-140 T 26-04-2016 IPR004566 Bacterial pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 smi_0883 fa840990ef281a32a8d1357fa8b48f70 306 PANTHER PTHR10285:SF7 1 252 2.1E-140 T 26-04-2016 IPR004566 Bacterial pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 smi_0883 fa840990ef281a32a8d1357fa8b48f70 306 Gene3D G3DSA:3.40.50.300 7 306 1.7E-104 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0883 fa840990ef281a32a8d1357fa8b48f70 306 Hamap MF_00215 Pantothenate kinase [coaA]. 1 306 146.581 T 26-04-2016 IPR004566 Bacterial pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 smi_0883 fa840990ef281a32a8d1357fa8b48f70 306 TIGRFAM TIGR00554 panK_bact: pantothenate kinase 8 306 2.5E-99 T 26-04-2016 IPR004566 Bacterial pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 smi_0883 fa840990ef281a32a8d1357fa8b48f70 306 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 86 224 2.3E-14 T 26-04-2016 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0008152|GO:0016301 smi_0883 fa840990ef281a32a8d1357fa8b48f70 306 SUPERFAMILY SSF52540 3 306 6.01E-70 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0883 fa840990ef281a32a8d1357fa8b48f70 306 PIRSF PIRSF000545 1 306 3.7E-139 T 26-04-2016 IPR004566 Bacterial pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 smi_0883 fa840990ef281a32a8d1357fa8b48f70 306 PANTHER PTHR10285 268 306 2.1E-140 T 26-04-2016 smi_0883 fa840990ef281a32a8d1357fa8b48f70 306 PANTHER PTHR10285 1 252 2.1E-140 T 26-04-2016 smi_2034 3da82518179ce75a780ff77e301daa34 608 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 425 437 2.1E-30 T 26-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 smi_2034 3da82518179ce75a780ff77e301daa34 608 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 33 43 2.1E-30 T 26-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 smi_2034 3da82518179ce75a780ff77e301daa34 608 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 94 106 2.1E-30 T 26-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 smi_2034 3da82518179ce75a780ff77e301daa34 608 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 49 61 2.1E-30 T 26-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 smi_2034 3da82518179ce75a780ff77e301daa34 608 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 20 32 2.1E-30 T 26-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 smi_2034 3da82518179ce75a780ff77e301daa34 608 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 343 349 2.1E-30 T 26-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 smi_2034 3da82518179ce75a780ff77e301daa34 608 ProSitePatterns PS00977 FAD-dependent glycerol-3-phosphate dehydrogenase signature 1. 25 42 - T 26-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 smi_2034 3da82518179ce75a780ff77e301daa34 608 Pfam PF01266 FAD dependent oxidoreductase 21 350 1.1E-49 T 26-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 smi_2034 3da82518179ce75a780ff77e301daa34 608 SUPERFAMILY SSF54373 253 349 5.49E-11 T 26-04-2016 smi_2034 3da82518179ce75a780ff77e301daa34 608 Gene3D G3DSA:3.50.50.60 14 333 1.8E-46 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 smi_2034 3da82518179ce75a780ff77e301daa34 608 PANTHER PTHR11985 408 608 2.0E-200 T 26-04-2016 smi_2034 3da82518179ce75a780ff77e301daa34 608 PANTHER PTHR11985 1 357 2.0E-200 T 26-04-2016 smi_2034 3da82518179ce75a780ff77e301daa34 608 SUPERFAMILY SSF51905 6 124 6.74E-33 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 smi_2034 3da82518179ce75a780ff77e301daa34 608 SUPERFAMILY SSF51905 160 264 6.74E-33 T 26-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 smi_2034 3da82518179ce75a780ff77e301daa34 608 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 465 585 1.5E-15 T 26-04-2016 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 smi_1737 4515e6480c0c2b0113e39685f3a6202d 204 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 27 43 1.1E-17 T 26-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 smi_1737 4515e6480c0c2b0113e39685f3a6202d 204 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 158 177 1.1E-17 T 26-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 smi_1737 4515e6480c0c2b0113e39685f3a6202d 204 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 74 86 1.1E-17 T 26-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 smi_1737 4515e6480c0c2b0113e39685f3a6202d 204 ProSitePatterns PS00760 Signal peptidases I lysine active site. 76 88 - T 26-04-2016 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 smi_1737 4515e6480c0c2b0113e39685f3a6202d 204 ProSitePatterns PS00501 Signal peptidases I serine active site. 36 43 - T 26-04-2016 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: REACT_15380 smi_1737 4515e6480c0c2b0113e39685f3a6202d 204 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 13 198 3.1E-41 T 26-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 smi_1737 4515e6480c0c2b0113e39685f3a6202d 204 Pfam PF00717 Peptidase S24-like 33 98 1.1E-20 T 26-04-2016 IPR019759 Peptidase S24/S26A/S26B smi_1737 4515e6480c0c2b0113e39685f3a6202d 204 PANTHER PTHR12383 141 204 1.2E-50 T 26-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 smi_1737 4515e6480c0c2b0113e39685f3a6202d 204 PANTHER PTHR12383 4 120 1.2E-50 T 26-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 smi_1737 4515e6480c0c2b0113e39685f3a6202d 204 Gene3D G3DSA:2.10.109.10 158 203 2.0E-29 T 26-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain smi_1737 4515e6480c0c2b0113e39685f3a6202d 204 Gene3D G3DSA:2.10.109.10 25 84 2.0E-29 T 26-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain smi_1737 4515e6480c0c2b0113e39685f3a6202d 204 PANTHER PTHR12383:SF14 141 204 1.2E-50 T 26-04-2016 smi_1737 4515e6480c0c2b0113e39685f3a6202d 204 PANTHER PTHR12383:SF14 4 120 1.2E-50 T 26-04-2016 smi_1737 4515e6480c0c2b0113e39685f3a6202d 204 SUPERFAMILY SSF51306 25 204 3.45E-49 T 26-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C smi_1501 38a8badf974c12173a2fb8c8d62a908f 153 SUPERFAMILY SSF55729 5 131 2.53E-20 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase smi_1501 38a8badf974c12173a2fb8c8d62a908f 153 PANTHER PTHR23091:SF279 4 130 1.4E-51 T 26-04-2016 smi_1501 38a8badf974c12173a2fb8c8d62a908f 153 Gene3D G3DSA:3.40.630.30 5 146 6.3E-24 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase smi_1501 38a8badf974c12173a2fb8c8d62a908f 153 Pfam PF13673 Acetyltransferase (GNAT) domain 30 129 3.8E-10 T 26-04-2016 IPR000182 GNAT domain GO:0008080 smi_1501 38a8badf974c12173a2fb8c8d62a908f 153 PANTHER PTHR23091 4 130 1.4E-51 T 26-04-2016 smi_0848 ac81e3fb51e86292b6a1a97454848f09 185 Gene3D G3DSA:2.40.320.10 3 179 2.8E-17 T 26-04-2016 IPR023577 CYTH domain smi_0848 ac81e3fb51e86292b6a1a97454848f09 185 ProDom PD009560 CYCLASE ADENYLATE CYCLASE ADENYLYL CYAB LYASE CLASS CYAB-TYPE THERMOPHILIC MJ0240 1 149 2.0E-5 T 26-04-2016 smi_0848 ac81e3fb51e86292b6a1a97454848f09 185 SUPERFAMILY SSF55154 3 177 1.98E-15 T 26-04-2016 IPR033469 CYTH-like domain smi_0848 ac81e3fb51e86292b6a1a97454848f09 185 Pfam PF01928 CYTH domain 1 145 2.0E-9 T 26-04-2016 IPR023577 CYTH domain smi_1011 4ec9f0c80e47ee39dfa25acf7b956bf2 444 PIRSF PIRSF005850 1 424 6.1E-161 T 26-04-2016 IPR019219 Protein of unknown function DUF2130 smi_1011 4ec9f0c80e47ee39dfa25acf7b956bf2 444 Pfam PF09903 Uncharacterized protein conserved in bacteria (DUF2130) 151 410 2.0E-90 T 26-04-2016 IPR019219 Protein of unknown function DUF2130 smi_0283 1f06887e6c48445286e0b3d4fde6ca5c 105 Pfam PF06124 Staphylococcal protein of unknown function (DUF960) 9 101 3.5E-28 T 26-04-2016 IPR009303 Protein of unknown function DUF960 smi_0283 1f06887e6c48445286e0b3d4fde6ca5c 105 Gene3D G3DSA:3.10.450.150 1 104 5.6E-48 T 26-04-2016 smi_0156 85e99565fca6a686a1ae96110d684598 154 SMART SM01321 12 130 3.6E-44 T 26-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 smi_0156 85e99565fca6a686a1ae96110d684598 154 PANTHER PTHR33360:SF2 3 146 6.2E-68 T 26-04-2016 smi_0156 85e99565fca6a686a1ae96110d684598 154 Pfam PF01797 Transposase IS200 like 13 130 3.1E-39 T 26-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 smi_0156 85e99565fca6a686a1ae96110d684598 154 Gene3D G3DSA:3.30.70.1290 1 134 1.3E-58 T 26-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 smi_0156 85e99565fca6a686a1ae96110d684598 154 SUPERFAMILY SSF143422 4 131 2.88E-48 T 26-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 smi_0156 85e99565fca6a686a1ae96110d684598 154 PANTHER PTHR33360 3 146 6.2E-68 T 26-04-2016 smi_1220 ce70dea024c5adfe39a4763d09026a0e 210 PANTHER PTHR12598:SF0 1 206 2.2E-75 T 26-04-2016 smi_1220 ce70dea024c5adfe39a4763d09026a0e 210 Pfam PF03932 CutC family 1 207 3.2E-64 T 26-04-2016 IPR005627 Copper homeostasis protein CutC GO:0005507|GO:0055070 smi_1220 ce70dea024c5adfe39a4763d09026a0e 210 SUPERFAMILY SSF110395 1 209 4.45E-56 T 26-04-2016 IPR023648 Copper homeostasis CutC domain GO:0005507|GO:0055070 smi_1220 ce70dea024c5adfe39a4763d09026a0e 210 PANTHER PTHR12598 1 206 2.2E-75 T 26-04-2016 IPR005627 Copper homeostasis protein CutC GO:0005507|GO:0055070 smi_1220 ce70dea024c5adfe39a4763d09026a0e 210 Gene3D G3DSA:3.20.20.380 1 208 2.2E-71 T 26-04-2016 IPR023648 Copper homeostasis CutC domain GO:0005507|GO:0055070 smi_1836 838c2855fd422e5091c930bbcbb63334 153 Gene3D G3DSA:1.10.10.10 3 142 3.7E-34 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain smi_1836 838c2855fd422e5091c930bbcbb63334 153 PANTHER PTHR33164 5 152 7.2E-18 T 26-04-2016 smi_1836 838c2855fd422e5091c930bbcbb63334 153 ProSitePatterns PS01117 MarR-type HTH domain signature. 66 101 - T 26-04-2016 IPR023187 Transcriptional regulator MarR-type, conserved site smi_1836 838c2855fd422e5091c930bbcbb63334 153 SUPERFAMILY SSF46785 5 142 4.42E-25 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain smi_1836 838c2855fd422e5091c930bbcbb63334 153 Pfam PF12802 MarR family 33 92 3.4E-13 T 26-04-2016 smi_1836 838c2855fd422e5091c930bbcbb63334 153 SMART SM00347 24 128 4.3E-7 T 26-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 smi_1322 2ba60a3afb78eb09734cb8648cec6bed 257 SUPERFAMILY SSF55729 14 145 7.16E-6 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase smi_1322 2ba60a3afb78eb09734cb8648cec6bed 257 ProDom PD038622 DNA MOM-LIKE MU MODIFICATION PHAGE MOM 16 222 2.0E-121 T 26-04-2016 IPR020291 DNA modification protein Mom KEGG: 00061+2.3.1.-|KEGG: 00253+2.3.1.-|KEGG: 00261+2.3.1.-|KEGG: 00310+2.3.1.-|KEGG: 00330+2.3.1.-|KEGG: 00332+2.3.1.-|KEGG: 00340+2.3.1.-|KEGG: 00350+2.3.1.-|KEGG: 00564+2.3.1.-|KEGG: 00565+2.3.1.-|KEGG: 00604+2.3.1.-|KEGG: 00623+2.3.1.-|KEGG: 00626+2.3.1.-|KEGG: 00627+2.3.1.-|KEGG: 00642+2.3.1.-|KEGG: 00650+2.3.1.-|KEGG: 00680+2.3.1.-|KEGG: 00903+2.3.1.-|KEGG: 00904+2.3.1.-|KEGG: 00906+2.3.1.-|KEGG: 00940+2.3.1.-|KEGG: 00942+2.3.1.-|KEGG: 00950+2.3.1.-|KEGG: 00960+2.3.1.-|KEGG: 00965+2.3.1.- smi_1322 2ba60a3afb78eb09734cb8648cec6bed 257 Gene3D G3DSA:3.40.630.30 12 152 7.5E-5 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase smi_1261 8b9eef2d4ebbc3d44f2f94d08bfdbe7a 124 Gene3D G3DSA:1.20.120.580 75 123 4.7E-5 T 26-04-2016 smi_1261 8b9eef2d4ebbc3d44f2f94d08bfdbe7a 124 Pfam PF01934 Protein of unknown function DUF86 51 112 3.4E-8 T 26-04-2016 IPR008201 Protein of unknown function DUF86 smi_1261 8b9eef2d4ebbc3d44f2f94d08bfdbe7a 124 PANTHER PTHR34139 2 121 1.3E-12 T 26-04-2016 smi_1333 b53ef915c5f66830263ee1aa5d7e8302 312 Pfam PF12642 Conjugative transposon protein TcpC 87 310 2.5E-58 T 26-04-2016 IPR024735 Conjugative transposon protein TcpC smi_1421 2ac3fb9567d132903afdd7cbdbbbda35 185 Gene3D G3DSA:1.10.357.10 24 167 1.6E-19 T 26-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 smi_1421 2ac3fb9567d132903afdd7cbdbbbda35 185 Pfam PF00440 Bacterial regulatory proteins, tetR family 32 75 7.4E-10 T 26-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 smi_1421 2ac3fb9567d132903afdd7cbdbbbda35 185 PANTHER PTHR30328 25 138 2.3E-28 T 26-04-2016 smi_1421 2ac3fb9567d132903afdd7cbdbbbda35 185 SUPERFAMILY SSF46689 23 87 4.46E-15 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 smi_1421 2ac3fb9567d132903afdd7cbdbbbda35 185 PANTHER PTHR30328:SF20 25 138 2.3E-28 T 26-04-2016 smi_0421 63426e0f274fdec5edd6de24793eea97 233 Pfam PF13479 AAA domain 15 211 8.9E-33 T 26-04-2016 smi_0421 63426e0f274fdec5edd6de24793eea97 233 TIGRFAM TIGR01618 phage_P_loop: phage nucleotide-binding protein 2 224 8.9E-96 T 26-04-2016 IPR006505 Streptococcus phage Sfi11, Gp233, NTP-binding smi_0421 63426e0f274fdec5edd6de24793eea97 233 Gene3D G3DSA:3.40.50.300 10 150 1.4E-4 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0421 63426e0f274fdec5edd6de24793eea97 233 SUPERFAMILY SSF52540 15 154 5.8E-6 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1151 5224bad163c51153d47e2ce0e0dbb84d 279 Gene3D G3DSA:3.40.50.10170 3 150 8.0E-48 T 26-04-2016 smi_1151 5224bad163c51153d47e2ce0e0dbb84d 279 TIGRFAM TIGR00762 DegV: EDD domain protein, DegV family 4 275 1.3E-91 T 26-04-2016 IPR003797 DegV smi_1151 5224bad163c51153d47e2ce0e0dbb84d 279 PANTHER PTHR33434:SF1 1 276 1.2E-143 T 26-04-2016 smi_1151 5224bad163c51153d47e2ce0e0dbb84d 279 Pfam PF02645 Uncharacterised protein, DegV family COG1307 3 276 1.4E-90 T 26-04-2016 IPR003797 DegV smi_1151 5224bad163c51153d47e2ce0e0dbb84d 279 PANTHER PTHR33434 1 276 1.2E-143 T 26-04-2016 smi_1151 5224bad163c51153d47e2ce0e0dbb84d 279 Gene3D G3DSA:3.30.1180.10 154 276 6.3E-41 T 26-04-2016 smi_1151 5224bad163c51153d47e2ce0e0dbb84d 279 SUPERFAMILY SSF82549 1 276 2.54E-82 T 26-04-2016 smi_0664 5d308cf3e390112a6637017cd042767b 225 Pfam PF04816 tRNA (adenine(22)-N(1))-methyltransferase 19 219 1.3E-79 T 26-04-2016 IPR006901 tRNA methyltransferase TrmK GO:0016429 smi_0664 5d308cf3e390112a6637017cd042767b 225 SUPERFAMILY SSF53335 3 138 2.7E-11 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase smi_0664 5d308cf3e390112a6637017cd042767b 225 PIRSF PIRSF018637 1 224 3.3E-73 T 26-04-2016 IPR006901 tRNA methyltransferase TrmK GO:0016429 smi_0664 5d308cf3e390112a6637017cd042767b 225 PANTHER PTHR38451 1 224 3.2E-89 T 26-04-2016 smi_0664 5d308cf3e390112a6637017cd042767b 225 Gene3D G3DSA:3.40.50.150 8 170 1.1E-12 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase smi_0337 3f77fdf33b2cf1926c8f64e65ad868ec 242 PANTHER PTHR33969 1 241 2.4E-74 T 26-04-2016 smi_0337 3f77fdf33b2cf1926c8f64e65ad868ec 242 Hamap MF_01805 Segregation and condensation protein A [scpA]. 1 234 25.208 T 26-04-2016 IPR003768 Segregation and condensation protein A smi_0337 3f77fdf33b2cf1926c8f64e65ad868ec 242 PANTHER PTHR33969:SF2 1 241 2.4E-74 T 26-04-2016 smi_0337 3f77fdf33b2cf1926c8f64e65ad868ec 242 Pfam PF02616 Segregation and condensation protein ScpA 18 230 4.7E-26 T 26-04-2016 IPR003768 Segregation and condensation protein A smi_0437 ae53fb884f27bf86fc601d49b21140e8 74 Pfam PF11753 Protein of unknwon function (DUF3310) 5 65 3.1E-14 T 26-04-2016 IPR021739 Protein of unknwon function DUF3310 smi_0024 16cdebd661086c82ccae99ca149e45f7 155 SUPERFAMILY SSF53927 5 154 2.01E-51 T 26-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 smi_0024 16cdebd661086c82ccae99ca149e45f7 155 PANTHER PTHR11079 9 155 9.9E-54 T 26-04-2016 smi_0024 16cdebd661086c82ccae99ca149e45f7 155 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 57 94 - T 26-04-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 smi_0024 16cdebd661086c82ccae99ca149e45f7 155 Pfam PF14437 MafB19-like deaminase 7 153 3.8E-36 T 26-04-2016 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 smi_0024 16cdebd661086c82ccae99ca149e45f7 155 PANTHER PTHR11079:SF72 9 155 9.9E-54 T 26-04-2016 smi_0024 16cdebd661086c82ccae99ca149e45f7 155 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 12 153 45.14 T 26-04-2016 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 smi_0024 16cdebd661086c82ccae99ca149e45f7 155 Gene3D G3DSA:3.40.140.10 5 151 3.7E-58 T 26-04-2016 smi_1160 6e00ebf6b8226d9c89da46b8ebb182a0 148 Pfam PF07997 Protein of unknown function (DUF1694) 1 120 1.1E-29 T 26-04-2016 IPR012543 Protein of unknown function DUF1694 smi_1160 6e00ebf6b8226d9c89da46b8ebb182a0 148 SUPERFAMILY SSF160515 1 129 1.44E-31 T 26-04-2016 smi_1160 6e00ebf6b8226d9c89da46b8ebb182a0 148 Gene3D G3DSA:3.30.1330.30 1 133 2.7E-40 T 26-04-2016 IPR029064 50S ribosomal protein L30e-like smi_1160 6e00ebf6b8226d9c89da46b8ebb182a0 148 PIRSF PIRSF034303 1 148 2.6E-42 T 26-04-2016 IPR012543 Protein of unknown function DUF1694 smi_0919 1eb0ccd421eba1f6a321aad3673d6f01 470 TIGRFAM TIGR01980 sufB: FeS assembly protein SufB 15 461 6.0E-224 T 26-04-2016 IPR010231 SUF system FeS cluster assembly, SufB GO:0016226 smi_0919 1eb0ccd421eba1f6a321aad3673d6f01 470 PANTHER PTHR30508 15 470 9.5E-244 T 26-04-2016 smi_0919 1eb0ccd421eba1f6a321aad3673d6f01 470 PANTHER PTHR30508:SF1 15 470 9.5E-244 T 26-04-2016 smi_0919 1eb0ccd421eba1f6a321aad3673d6f01 470 SUPERFAMILY SSF101960 37 467 3.79E-140 T 26-04-2016 smi_0919 1eb0ccd421eba1f6a321aad3673d6f01 470 Pfam PF01458 Uncharacterized protein family (UPF0051) 216 441 8.2E-76 T 26-04-2016 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 smi_0439 f5e0695d9fee49c23f57d3e569f08e99 71 Gene3D G3DSA:2.10.260.10 3 43 8.8E-5 T 26-04-2016 smi_0439 f5e0695d9fee49c23f57d3e569f08e99 71 SUPERFAMILY SSF89447 3 54 3.31E-7 T 26-04-2016 smi_1499 c97f3ab69e5d4e8177f8f6ff73b1fced 564 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 194 556 1.8E-65 T 26-04-2016 IPR003770 Uncharacterised protein family UPF0755, YceG-like smi_1499 c97f3ab69e5d4e8177f8f6ff73b1fced 564 Pfam PF02618 YceG-like family 235 550 1.2E-73 T 26-04-2016 IPR003770 Uncharacterised protein family UPF0755, YceG-like smi_1499 c97f3ab69e5d4e8177f8f6ff73b1fced 564 PANTHER PTHR30518:SF2 182 563 1.0E-80 T 26-04-2016 smi_1499 c97f3ab69e5d4e8177f8f6ff73b1fced 564 Gene3D G3DSA:3.30.160.60 525 554 5.8E-5 T 26-04-2016 IPR013087 Zinc finger C2H2-type/integrase DNA-binding domain GO:0003676 smi_1499 c97f3ab69e5d4e8177f8f6ff73b1fced 564 PANTHER PTHR30518 182 563 1.0E-80 T 26-04-2016 smi_0979 e0b86fab813ba0113ebd0a60d97364a7 1218 Pfam PF00746 Gram positive anchor 1177 1212 2.5E-5 T 26-04-2016 IPR019948 Gram-positive anchor smi_0979 e0b86fab813ba0113ebd0a60d97364a7 1218 Pfam PF07564 Domain of Unknown Function (DUF1542) 909 975 2.3E-14 T 26-04-2016 IPR011439 Domain of unknown function DUF1542 smi_0979 e0b86fab813ba0113ebd0a60d97364a7 1218 Pfam PF07564 Domain of Unknown Function (DUF1542) 678 744 3.0E-14 T 26-04-2016 IPR011439 Domain of unknown function DUF1542 smi_0979 e0b86fab813ba0113ebd0a60d97364a7 1218 Pfam PF07564 Domain of Unknown Function (DUF1542) 832 898 2.3E-14 T 26-04-2016 IPR011439 Domain of unknown function DUF1542 smi_0979 e0b86fab813ba0113ebd0a60d97364a7 1218 Pfam PF07564 Domain of Unknown Function (DUF1542) 755 821 2.3E-14 T 26-04-2016 IPR011439 Domain of unknown function DUF1542 smi_0979 e0b86fab813ba0113ebd0a60d97364a7 1218 Pfam PF07564 Domain of Unknown Function (DUF1542) 1063 1122 6.3E-14 T 26-04-2016 IPR011439 Domain of unknown function DUF1542 smi_0979 e0b86fab813ba0113ebd0a60d97364a7 1218 Pfam PF07564 Domain of Unknown Function (DUF1542) 986 1052 2.3E-14 T 26-04-2016 IPR011439 Domain of unknown function DUF1542 smi_0979 e0b86fab813ba0113ebd0a60d97364a7 1218 TIGRFAM TIGR01168 YSIRK_signal: gram-positive signal peptide, YSIRK family 5 46 8.5E-13 T 26-04-2016 IPR005877 YSIRK Gram-positive signal peptide GO:0016020 smi_0979 e0b86fab813ba0113ebd0a60d97364a7 1218 TIGRFAM TIGR01167 LPXTG_anchor: LPXTG cell wall anchor domain 1181 1214 1.1E-5 T 26-04-2016 IPR019931 LPXTG cell wall anchor domain smi_0979 e0b86fab813ba0113ebd0a60d97364a7 1218 TIGRFAM TIGR04263 SasC_Mrp_aggreg: SasC/Mrp/FmtB intercellular aggregation domain 240 608 3.6E-118 T 26-04-2016 IPR026359 SasC/Mrp/FmtB intercellular aggregation domain smi_0979 e0b86fab813ba0113ebd0a60d97364a7 1218 Pfam PF04650 YSIRK type signal peptide 10 35 1.3E-9 T 26-04-2016 IPR005877 YSIRK Gram-positive signal peptide GO:0016020 smi_0867 4aa87dc4e4c5b9d353feb7daeab1c03f 227 PANTHER PTHR30614:SF15 1 227 2.3E-84 T 26-04-2016 smi_0867 4aa87dc4e4c5b9d353feb7daeab1c03f 227 PANTHER PTHR30614 1 227 2.3E-84 T 26-04-2016 smi_0867 4aa87dc4e4c5b9d353feb7daeab1c03f 227 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 31 212 3.1E-19 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 smi_0867 4aa87dc4e4c5b9d353feb7daeab1c03f 227 Gene3D G3DSA:1.10.3720.10 10 220 2.8E-45 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 smi_0867 4aa87dc4e4c5b9d353feb7daeab1c03f 227 SUPERFAMILY SSF161098 11 207 2.35E-39 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 smi_0867 4aa87dc4e4c5b9d353feb7daeab1c03f 227 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 10 116 8.6E-19 T 26-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 smi_0649 16f80ab436690cc35c2bf9e0bb39f450 225 PANTHER PTHR26402 2 223 4.4E-130 T 26-04-2016 smi_0649 16f80ab436690cc35c2bf9e0bb39f450 225 PANTHER PTHR26402:SF519 2 223 4.4E-130 T 26-04-2016 smi_0649 16f80ab436690cc35c2bf9e0bb39f450 225 SMART SM00862 147 222 3.4E-19 T 26-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 smi_0649 16f80ab436690cc35c2bf9e0bb39f450 225 SMART SM00448 2 112 2.3E-35 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 smi_0649 16f80ab436690cc35c2bf9e0bb39f450 225 Pfam PF00072 Response regulator receiver domain 4 112 2.8E-25 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 smi_0649 16f80ab436690cc35c2bf9e0bb39f450 225 Gene3D G3DSA:3.40.50.2300 1 123 1.4E-35 T 26-04-2016 smi_0649 16f80ab436690cc35c2bf9e0bb39f450 225 Pfam PF00486 Transcriptional regulatory protein, C terminal 147 221 2.3E-23 T 26-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 smi_0649 16f80ab436690cc35c2bf9e0bb39f450 225 Gene3D G3DSA:1.10.10.10 125 223 4.6E-27 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain smi_0649 16f80ab436690cc35c2bf9e0bb39f450 225 SUPERFAMILY SSF52172 1 126 4.13E-37 T 26-04-2016 IPR011006 CheY-like superfamily smi_0649 16f80ab436690cc35c2bf9e0bb39f450 225 SUPERFAMILY SSF46894 124 222 1.98E-25 T 26-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 smi_1522 b6de7f0681e870751d4c8d6cc8ff0db2 156 Gene3D G3DSA:2.40.50.140 1 156 4.7E-48 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold smi_1522 b6de7f0681e870751d4c8d6cc8ff0db2 156 SUPERFAMILY SSF50249 1 156 3.12E-52 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold smi_1522 b6de7f0681e870751d4c8d6cc8ff0db2 156 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 1 156 1.6E-44 T 26-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 smi_1522 b6de7f0681e870751d4c8d6cc8ff0db2 156 Pfam PF00436 Single-strand binding protein family 2 103 3.6E-36 T 26-04-2016 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 smi_1522 b6de7f0681e870751d4c8d6cc8ff0db2 156 Hamap MF_00984 Single-stranded DNA-binding protein. 2 107 36.571 T 26-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 smi_1522 b6de7f0681e870751d4c8d6cc8ff0db2 156 PIRSF PIRSF002070 1 143 2.5E-36 T 26-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 smi_1522 b6de7f0681e870751d4c8d6cc8ff0db2 156 PANTHER PTHR10302 1 156 3.0E-44 T 26-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 smi_0323 a493a569bfa41cc96e66cd465cf7ae67 498 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 298 491 5.3E-37 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 smi_0323 a493a569bfa41cc96e66cd465cf7ae67 498 PANTHER PTHR30465:SF0 261 492 8.9E-101 T 26-04-2016 smi_0323 a493a569bfa41cc96e66cd465cf7ae67 498 PANTHER PTHR30465:SF0 145 170 8.9E-101 T 26-04-2016 smi_0323 a493a569bfa41cc96e66cd465cf7ae67 498 PANTHER PTHR30465:SF0 62 78 8.9E-101 T 26-04-2016 smi_0323 a493a569bfa41cc96e66cd465cf7ae67 498 PANTHER PTHR30465:SF0 1 44 8.9E-101 T 26-04-2016 smi_0323 a493a569bfa41cc96e66cd465cf7ae67 498 Gene3D G3DSA:1.10.3720.10 275 482 8.2E-15 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 smi_0323 a493a569bfa41cc96e66cd465cf7ae67 498 PANTHER PTHR30465 261 492 8.9E-101 T 26-04-2016 smi_0323 a493a569bfa41cc96e66cd465cf7ae67 498 PANTHER PTHR30465 145 170 8.9E-101 T 26-04-2016 smi_0323 a493a569bfa41cc96e66cd465cf7ae67 498 PANTHER PTHR30465 62 78 8.9E-101 T 26-04-2016 smi_0323 a493a569bfa41cc96e66cd465cf7ae67 498 PANTHER PTHR30465 1 44 8.9E-101 T 26-04-2016 smi_0323 a493a569bfa41cc96e66cd465cf7ae67 498 SUPERFAMILY SSF161098 278 474 8.63E-16 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 smi_1592 a0eec6bd9ee50a799bd2a7faab1ee667 376 Gene3D G3DSA:2.40.50.140 297 360 4.6E-12 T 26-04-2016 IPR012340 Nucleic acid-binding, OB-fold smi_1592 a0eec6bd9ee50a799bd2a7faab1ee667 376 Pfam PF08402 TOBE domain 293 367 5.8E-8 T 26-04-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 smi_1592 a0eec6bd9ee50a799bd2a7faab1ee667 376 Gene3D G3DSA:2.40.50.100 251 296 2.1E-24 T 26-04-2016 smi_1592 a0eec6bd9ee50a799bd2a7faab1ee667 376 Gene3D G3DSA:2.40.50.100 361 376 2.1E-24 T 26-04-2016 smi_1592 a0eec6bd9ee50a799bd2a7faab1ee667 376 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 26-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 smi_1592 a0eec6bd9ee50a799bd2a7faab1ee667 376 SMART SM00382 30 213 3.2E-12 T 26-04-2016 IPR003593 AAA+ ATPase domain smi_1592 a0eec6bd9ee50a799bd2a7faab1ee667 376 PANTHER PTHR24220 5 302 1.0E-163 T 26-04-2016 smi_1592 a0eec6bd9ee50a799bd2a7faab1ee667 376 SUPERFAMILY SSF50331 248 375 4.86E-27 T 26-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal smi_1592 a0eec6bd9ee50a799bd2a7faab1ee667 376 PANTHER PTHR24220:SF151 5 302 1.0E-163 T 26-04-2016 smi_1592 a0eec6bd9ee50a799bd2a7faab1ee667 376 Pfam PF00005 ABC transporter 22 163 8.7E-30 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 smi_1592 a0eec6bd9ee50a799bd2a7faab1ee667 376 SUPERFAMILY SSF52540 4 255 1.96E-81 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1592 a0eec6bd9ee50a799bd2a7faab1ee667 376 Gene3D G3DSA:3.40.50.300 4 246 1.0E-73 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1933 0b708f42f1f1b733daec4eab60cfbcb2 146 PANTHER PTHR37299 1 146 1.1E-86 T 26-04-2016 smi_1933 0b708f42f1f1b733daec4eab60cfbcb2 146 Pfam PF04397 LytTr DNA-binding domain 50 144 1.0E-17 T 26-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 smi_1933 0b708f42f1f1b733daec4eab60cfbcb2 146 PANTHER PTHR37299:SF2 1 146 1.1E-86 T 26-04-2016 smi_1933 0b708f42f1f1b733daec4eab60cfbcb2 146 SMART SM00850 49 145 8.3E-23 T 26-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 smi_1933 0b708f42f1f1b733daec4eab60cfbcb2 146 Gene3D G3DSA:2.40.50.40 41 107 2.6E-10 T 26-04-2016 smi_1198 fe5946809ee033e2d2ec6761bbef3259 158 PANTHER PTHR22769 12 139 1.7E-45 T 26-04-2016 smi_1198 fe5946809ee033e2d2ec6761bbef3259 158 Pfam PF00293 NUDIX domain 15 125 7.2E-16 T 26-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 smi_1198 fe5946809ee033e2d2ec6761bbef3259 158 Gene3D G3DSA:3.90.79.10 9 148 2.5E-31 T 26-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 smi_1198 fe5946809ee033e2d2ec6761bbef3259 158 PANTHER PTHR22769:SF30 12 139 1.7E-45 T 26-04-2016 smi_1198 fe5946809ee033e2d2ec6761bbef3259 158 PRINTS PR00502 NUDIX hydrolase family signature 52 67 1.6E-6 T 26-04-2016 IPR020476 NUDIX hydrolase smi_1198 fe5946809ee033e2d2ec6761bbef3259 158 PRINTS PR00502 NUDIX hydrolase family signature 38 52 1.6E-6 T 26-04-2016 IPR020476 NUDIX hydrolase smi_1198 fe5946809ee033e2d2ec6761bbef3259 158 SUPERFAMILY SSF55811 1 145 1.76E-28 T 26-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 smi_0267 bd0e85b590af8a6d9a39e465a4c282c0 240 Gene3D G3DSA:3.10.290.10 1 64 8.5E-22 T 26-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 smi_0267 bd0e85b590af8a6d9a39e465a4c282c0 240 SUPERFAMILY SSF55120 47 238 2.4E-44 T 26-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 smi_0267 bd0e85b590af8a6d9a39e465a4c282c0 240 Pfam PF00849 RNA pseudouridylate synthase 62 194 1.3E-20 T 26-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 smi_0267 bd0e85b590af8a6d9a39e465a4c282c0 240 SMART SM00363 1 59 3.1E-9 T 26-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 smi_0267 bd0e85b590af8a6d9a39e465a4c282c0 240 PANTHER PTHR21600 1 235 1.7E-68 T 26-04-2016 smi_0267 bd0e85b590af8a6d9a39e465a4c282c0 240 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 66 229 8.9E-52 T 26-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 smi_0267 bd0e85b590af8a6d9a39e465a4c282c0 240 PANTHER PTHR21600:SF19 1 235 1.7E-68 T 26-04-2016 smi_0267 bd0e85b590af8a6d9a39e465a4c282c0 240 SUPERFAMILY SSF55174 1 59 1.92E-13 T 26-04-2016 smi_0267 bd0e85b590af8a6d9a39e465a4c282c0 240 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 100 114 - T 26-04-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 smi_0267 bd0e85b590af8a6d9a39e465a4c282c0 240 Pfam PF01479 S4 domain 1 43 2.7E-8 T 26-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 smi_1186 4f63ee4fcb8c398b84017fafba7c4b23 115 Gene3D G3DSA:3.30.1820.10 1 112 1.8E-47 T 26-04-2016 IPR014965 Putative amino acid metabolism smi_1186 4f63ee4fcb8c398b84017fafba7c4b23 115 Pfam PF08866 Putative amino acid metabolism 1 111 7.2E-42 T 26-04-2016 IPR014965 Putative amino acid metabolism smi_1186 4f63ee4fcb8c398b84017fafba7c4b23 115 SUPERFAMILY SSF160800 1 112 7.32E-42 T 26-04-2016 IPR014965 Putative amino acid metabolism smi_1919 6880ac5c9f7b0a9379e8448601488f57 139 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 1 139 26.601 T 26-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 smi_1919 6880ac5c9f7b0a9379e8448601488f57 139 SMART SM00732 1 103 2.5E-38 T 26-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 smi_1919 6880ac5c9f7b0a9379e8448601488f57 139 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 4 136 1.3E-42 T 26-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 smi_1919 6880ac5c9f7b0a9379e8448601488f57 139 PANTHER PTHR33317 1 136 3.0E-43 T 26-04-2016 smi_1919 6880ac5c9f7b0a9379e8448601488f57 139 SUPERFAMILY SSF53098 1 137 5.92E-42 T 26-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 smi_1919 6880ac5c9f7b0a9379e8448601488f57 139 Gene3D G3DSA:3.30.420.140 1 138 4.7E-50 T 26-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 smi_1919 6880ac5c9f7b0a9379e8448601488f57 139 Pfam PF03652 Holliday junction resolvase 1 136 5.5E-43 T 26-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 smi_0866 b6668f6ad1c4cdd09be7e89557869b55 76 Pfam PF08796 Protein of unknown function (DUF1797) 8 75 8.9E-25 T 26-04-2016 IPR014904 Protein of unknown function DUF1797 smi_0866 b6668f6ad1c4cdd09be7e89557869b55 76 SUPERFAMILY SSF143567 3 76 7.98E-25 T 26-04-2016 smi_0866 b6668f6ad1c4cdd09be7e89557869b55 76 PIRSF PIRSF037356 1 76 5.2E-31 T 26-04-2016 IPR014904 Protein of unknown function DUF1797 smi_0907 548f987877adf908767da0414437beb6 655 SUPERFAMILY SSF53850 29 590 1.72E-76 T 26-04-2016 smi_0907 548f987877adf908767da0414437beb6 655 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 77 519 5.0E-50 T 26-04-2016 IPR000914 Solute-binding protein family 5 domain smi_0907 548f987877adf908767da0414437beb6 655 PANTHER PTHR30290 405 630 4.0E-120 T 26-04-2016 smi_0907 548f987877adf908767da0414437beb6 655 PANTHER PTHR30290 1 312 4.0E-120 T 26-04-2016 smi_0907 548f987877adf908767da0414437beb6 655 PANTHER PTHR30290 331 389 4.0E-120 T 26-04-2016 smi_0907 548f987877adf908767da0414437beb6 655 Gene3D G3DSA:3.10.105.10 303 582 2.3E-31 T 26-04-2016 smi_0907 548f987877adf908767da0414437beb6 655 PANTHER PTHR30290:SF10 405 630 4.0E-120 T 26-04-2016 smi_0907 548f987877adf908767da0414437beb6 655 PANTHER PTHR30290:SF10 1 312 4.0E-120 T 26-04-2016 smi_0907 548f987877adf908767da0414437beb6 655 PANTHER PTHR30290:SF10 331 389 4.0E-120 T 26-04-2016 smi_0907 548f987877adf908767da0414437beb6 655 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 82 104 - T 26-04-2016 IPR023765 Solute-binding protein family 5, conserved site smi_0907 548f987877adf908767da0414437beb6 655 Gene3D G3DSA:3.90.76.10 43 221 1.6E-40 T 26-04-2016 smi_0179 36c07b3a3f6f4e45726fc99cf8b14166 145 SUPERFAMILY SSF109604 2 126 8.48E-22 T 26-04-2016 smi_0179 36c07b3a3f6f4e45726fc99cf8b14166 145 Pfam PF13328 HD domain 9 84 3.2E-5 T 26-04-2016 IPR003607 HD/PDEase domain smi_1319 6f9c432a25376db652dc5f31e61e1060 597 Pfam PF00580 UvrD/REP helicase N-terminal domain 154 247 1.7E-18 T 26-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 smi_1319 6f9c432a25376db652dc5f31e61e1060 597 Pfam PF00580 UvrD/REP helicase N-terminal domain 13 153 3.3E-19 T 26-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 smi_1319 6f9c432a25376db652dc5f31e61e1060 597 PANTHER PTHR11070 493 597 1.8E-54 T 26-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 smi_1319 6f9c432a25376db652dc5f31e61e1060 597 PANTHER PTHR11070 1 459 1.8E-54 T 26-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 smi_1319 6f9c432a25376db652dc5f31e61e1060 597 Gene3D G3DSA:3.40.50.300 500 591 1.7E-21 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1319 6f9c432a25376db652dc5f31e61e1060 597 Gene3D G3DSA:3.40.50.300 274 369 1.7E-21 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1319 6f9c432a25376db652dc5f31e61e1060 597 Gene3D G3DSA:3.40.50.300 11 247 1.8E-50 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1319 6f9c432a25376db652dc5f31e61e1060 597 Pfam PF13361 UvrD-like helicase C-terminal domain 484 568 1.6E-11 T 26-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 smi_1319 6f9c432a25376db652dc5f31e61e1060 597 SUPERFAMILY SSF52540 1 574 4.6E-76 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0862 19bc2668b4d4490487d5d927037d7842 210 Pfam PF00583 Acetyltransferase (GNAT) family 125 184 1.2E-5 T 26-04-2016 IPR000182 GNAT domain GO:0008080 smi_0862 19bc2668b4d4490487d5d927037d7842 210 SUPERFAMILY SSF55729 1 93 1.02E-15 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase smi_0862 19bc2668b4d4490487d5d927037d7842 210 SUPERFAMILY SSF55729 120 195 1.02E-15 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase smi_0862 19bc2668b4d4490487d5d927037d7842 210 Gene3D G3DSA:3.40.630.30 4 193 2.4E-18 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase smi_1110 3855a006374ef4500721ff7ae6803088 202 SUPERFAMILY SSF52317 39 164 4.2E-13 T 26-04-2016 IPR029062 Class I glutamine amidotransferase-like smi_1110 3855a006374ef4500721ff7ae6803088 202 Pfam PF03575 Peptidase family S51 40 192 1.0E-13 T 26-04-2016 IPR005320 Peptidase S51 GO:0006508|GO:0008236 smi_1110 3855a006374ef4500721ff7ae6803088 202 Gene3D G3DSA:3.40.50.880 4 199 1.3E-29 T 26-04-2016 IPR029062 Class I glutamine amidotransferase-like smi_0403 b395ef57b1ee94a86781d0fd52975659 99 Pfam PF15513 Domain of unknown function (DUF4651) 37 97 1.6E-28 T 26-04-2016 IPR028105 Protein of unknown function DUF4651 smi_1097 8ff5fb399fe77fe222882be37c0f1e20 188 SUPERFAMILY SSF109604 3 156 8.16E-21 T 26-04-2016 smi_1097 8ff5fb399fe77fe222882be37c0f1e20 188 Pfam PF13328 HD domain 4 123 2.6E-10 T 26-04-2016 IPR003607 HD/PDEase domain smi_1097 8ff5fb399fe77fe222882be37c0f1e20 188 PANTHER PTHR21262 4 127 1.8E-18 T 26-04-2016 smi_1732 1e5c4df1812a139d1803d2a957debef0 309 SMART SM00530 10 64 0.0027 T 26-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 smi_1732 1e5c4df1812a139d1803d2a957debef0 309 Gene3D G3DSA:1.10.260.40 12 70 9.8E-6 T 26-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 smi_1732 1e5c4df1812a139d1803d2a957debef0 309 SUPERFAMILY SSF47413 7 64 6.48E-8 T 26-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 smi_1732 1e5c4df1812a139d1803d2a957debef0 309 PANTHER PTHR37038 5 195 1.9E-15 T 26-04-2016 smi_1732 1e5c4df1812a139d1803d2a957debef0 309 PANTHER PTHR37038:SF1 5 195 1.9E-15 T 26-04-2016 smi_1732 1e5c4df1812a139d1803d2a957debef0 309 Pfam PF12844 Helix-turn-helix domain 12 63 9.8E-8 T 26-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 smi_0534 0ebf4d9ee00a19941a4c5d818348a944 151 Pfam PF11694 Protein of unknown function (DUF3290) 2 142 1.2E-40 T 26-04-2016 IPR021707 Protein of unknown function DUF3290 smi_1983 9acc802f77ea07d9f264994934cf4b2b 276 Pfam PF00535 Glycosyl transferase family 2 8 157 1.2E-20 T 26-04-2016 IPR001173 Glycosyltransferase 2-like smi_1983 9acc802f77ea07d9f264994934cf4b2b 276 Gene3D G3DSA:3.90.550.10 6 238 4.0E-39 T 26-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases smi_1983 9acc802f77ea07d9f264994934cf4b2b 276 PANTHER PTHR22916:SF27 1 274 9.1E-77 T 26-04-2016 smi_1983 9acc802f77ea07d9f264994934cf4b2b 276 SUPERFAMILY SSF53448 6 231 1.69E-35 T 26-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases smi_1983 9acc802f77ea07d9f264994934cf4b2b 276 PANTHER PTHR22916 1 274 9.1E-77 T 26-04-2016 smi_1047 29e247f53163d9d387f0572b02e4c435 164 Pfam PF03692 Putative zinc- or iron-chelating domain 52 140 1.8E-15 T 26-04-2016 IPR005358 Putative zinc- or iron-chelating domain containing protein smi_1690 5ef58ac0ef228e2e7ad43ce03873d3be 100 Pfam PF01610 Transposase 8 82 5.2E-17 T 26-04-2016 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain smi_1690 5ef58ac0ef228e2e7ad43ce03873d3be 100 PANTHER PTHR33498:SF1 1 96 6.5E-48 T 26-04-2016 smi_1690 5ef58ac0ef228e2e7ad43ce03873d3be 100 PANTHER PTHR33498 1 96 6.5E-48 T 26-04-2016 smi_1980 495a9255b5a40b9716519370cf26a361 290 PANTHER PTHR30182 1 289 1.3E-138 T 26-04-2016 smi_1980 495a9255b5a40b9716519370cf26a361 290 TIGRFAM TIGR00718 sda_alpha: L-serine dehydratase, iron-sulfur-dependent, alpha subunit 1 289 1.6E-112 T 26-04-2016 IPR004642 Serine dehydratase, alpha subunit GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17|UniPathway: UPA00138 smi_1980 495a9255b5a40b9716519370cf26a361 290 Pfam PF03313 Serine dehydratase alpha chain 19 275 2.8E-75 T 26-04-2016 IPR005130 Serine dehydratase-like, alpha subunit smi_1707 d6c0703c319c0e883e4afe835a78f82b 152 Gene3D G3DSA:1.10.10.10 6 63 1.5E-16 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain smi_1707 d6c0703c319c0e883e4afe835a78f82b 152 PANTHER PTHR30363 1 109 1.9E-23 T 26-04-2016 smi_1707 d6c0703c319c0e883e4afe835a78f82b 152 Pfam PF08279 HTH domain 6 59 5.2E-18 T 26-04-2016 IPR013196 Helix-turn-helix, type 11 smi_1707 d6c0703c319c0e883e4afe835a78f82b 152 SUPERFAMILY SSF46785 4 61 3.47E-13 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain smi_1707 d6c0703c319c0e883e4afe835a78f82b 152 PANTHER PTHR30363:SF7 1 109 1.9E-23 T 26-04-2016 smi_1035 dfa7fdff0d23b018eb688c125f4dc67c 240 PANTHER PTHR10108:SF705 52 213 3.5E-16 T 26-04-2016 smi_1035 dfa7fdff0d23b018eb688c125f4dc67c 240 PANTHER PTHR10108 52 213 3.5E-16 T 26-04-2016 smi_1035 dfa7fdff0d23b018eb688c125f4dc67c 240 Gene3D G3DSA:3.40.50.150 11 206 7.5E-28 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase smi_1035 dfa7fdff0d23b018eb688c125f4dc67c 240 Pfam PF13649 Methyltransferase domain 53 154 6.2E-17 T 26-04-2016 smi_1035 dfa7fdff0d23b018eb688c125f4dc67c 240 SUPERFAMILY SSF53335 26 213 1.96E-26 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase smi_0410 bfb7e05fdf8b6e3de3e7a7ac19863be8 70 SUPERFAMILY SSF47413 10 70 2.22E-7 T 26-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 smi_0410 bfb7e05fdf8b6e3de3e7a7ac19863be8 70 Gene3D G3DSA:1.10.260.40 13 70 4.4E-8 T 26-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 smi_0410 bfb7e05fdf8b6e3de3e7a7ac19863be8 70 SMART SM00530 13 70 2.6E-4 T 26-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 smi_1214 a1560423f2f28c94466284808c16e7c7 197 PANTHER PTHR11670 1 196 1.4E-99 T 26-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 smi_1214 a1560423f2f28c94466284808c16e7c7 197 SUPERFAMILY SSF52016 1 191 2.55E-58 T 26-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel smi_1214 a1560423f2f28c94466284808c16e7c7 197 Pfam PF00694 Aconitase C-terminal domain 1 124 1.1E-39 T 26-04-2016 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 smi_1214 a1560423f2f28c94466284808c16e7c7 197 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 1 195 41.897 T 26-04-2016 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 smi_1214 a1560423f2f28c94466284808c16e7c7 197 PANTHER PTHR11670:SF27 1 196 1.4E-99 T 26-04-2016 smi_1214 a1560423f2f28c94466284808c16e7c7 197 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 1 184 4.9E-70 T 26-04-2016 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 smi_1214 a1560423f2f28c94466284808c16e7c7 197 Gene3D G3DSA:3.20.19.10 1 191 3.5E-47 T 26-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel smi_1629 205143de4608fcd8e9bde44c4feb01bb 249 Gene3D G3DSA:3.30.30.80 1 25 1.3E-4 T 26-04-2016 IPR032782 Jag, N-terminal smi_1629 205143de4608fcd8e9bde44c4feb01bb 249 Pfam PF16127 Domain of unknown function (DUF4839) 127 248 6.5E-30 T 26-04-2016 IPR032290 Protein of unknown function DUF4839 smi_1263 0d3d7818617cb2fbe73ac5969c26c0f3 86 TIGRFAM TIGR02384 RelB_DinJ: addiction module antitoxin, RelB/DinJ family 34 85 1.9E-20 T 26-04-2016 IPR007337 RelB antitoxin/Antitoxin DinJ smi_1263 0d3d7818617cb2fbe73ac5969c26c0f3 86 Pfam PF04221 RelB antitoxin 34 83 2.1E-15 T 26-04-2016 IPR007337 RelB antitoxin/Antitoxin DinJ smi_0700 7fd2c5390eaea3d075df5aea8660a0dc 181 PANTHER PTHR23029:SF1 24 149 2.5E-15 T 26-04-2016 smi_0700 7fd2c5390eaea3d075df5aea8660a0dc 181 PANTHER PTHR23029 24 149 2.5E-15 T 26-04-2016 smi_0700 7fd2c5390eaea3d075df5aea8660a0dc 181 Gene3D G3DSA:3.40.50.1240 5 173 1.1E-31 T 26-04-2016 IPR029033 Histidine phosphatase superfamily smi_0700 7fd2c5390eaea3d075df5aea8660a0dc 181 SUPERFAMILY SSF53254 6 167 2.57E-22 T 26-04-2016 IPR029033 Histidine phosphatase superfamily smi_0700 7fd2c5390eaea3d075df5aea8660a0dc 181 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 6 166 2.2E-17 T 26-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 smi_0856 bfd5b1ac6edb739dbfa3c19d668daf94 407 Pfam PF01098 Cell cycle protein 13 384 2.5E-79 T 26-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 smi_0856 bfd5b1ac6edb739dbfa3c19d668daf94 407 PANTHER PTHR30474 1 401 1.3E-156 T 26-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 smi_0856 bfd5b1ac6edb739dbfa3c19d668daf94 407 PANTHER PTHR30474:SF1 1 401 1.3E-156 T 26-04-2016 IPR011923 Rod shape-determining protein RodA GO:0008360|GO:0016021 smi_0856 bfd5b1ac6edb739dbfa3c19d668daf94 407 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 342 366 - T 26-04-2016 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0007049|GO:0016021 smi_0639 149c2c45021cb22d529c4812edaf6f35 650 PANTHER PTHR11733:SF65 26 650 5.8E-153 T 26-04-2016 smi_0639 149c2c45021cb22d529c4812edaf6f35 650 Pfam PF05649 Peptidase family M13 25 403 1.8E-60 T 26-04-2016 IPR008753 Peptidase M13, N-terminal domain GO:0006508 smi_0639 149c2c45021cb22d529c4812edaf6f35 650 Gene3D G3DSA:3.40.390.10 291 406 4.8E-91 T 26-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 smi_0639 149c2c45021cb22d529c4812edaf6f35 650 Gene3D G3DSA:3.40.390.10 448 650 4.8E-91 T 26-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 smi_0639 149c2c45021cb22d529c4812edaf6f35 650 Pfam PF01431 Peptidase family M13 457 647 1.4E-61 T 26-04-2016 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 smi_0639 149c2c45021cb22d529c4812edaf6f35 650 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 558 569 9.6E-22 T 26-04-2016 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 smi_0639 149c2c45021cb22d529c4812edaf6f35 650 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 467 479 9.6E-22 T 26-04-2016 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 smi_0639 149c2c45021cb22d529c4812edaf6f35 650 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 449 461 9.6E-22 T 26-04-2016 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 smi_0639 149c2c45021cb22d529c4812edaf6f35 650 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 488 504 9.6E-22 T 26-04-2016 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 smi_0639 149c2c45021cb22d529c4812edaf6f35 650 PANTHER PTHR11733 26 650 5.8E-153 T 26-04-2016 IPR000718 Peptidase M13 GO:0004222|GO:0006508 smi_0639 149c2c45021cb22d529c4812edaf6f35 650 SUPERFAMILY SSF55486 25 650 1.26E-188 T 26-04-2016 smi_1652 0444cf3bbcdb643526c1e516fd936905 526 Pfam PF16993 Accessory Sec system protein Asp1 1 519 1.2E-182 T 26-04-2016 IPR022372 Accessory secretory system protein Asp1 GO:0015031 smi_1652 0444cf3bbcdb643526c1e516fd936905 526 TIGRFAM TIGR03713 acc_sec_asp1: accessory Sec system protein Asp1 1 517 1.2E-202 T 26-04-2016 IPR022372 Accessory secretory system protein Asp1 GO:0015031 smi_1660 0cec12b1c96d401b315eaa8d5a0814fd 292 Gene3D G3DSA:2.160.10.10 154 280 4.1E-31 T 26-04-2016 smi_1660 0cec12b1c96d401b315eaa8d5a0814fd 292 SUPERFAMILY SSF51161 110 281 2.5E-29 T 26-04-2016 IPR011004 Trimeric LpxA-like smi_1660 0cec12b1c96d401b315eaa8d5a0814fd 292 PANTHER PTHR23416:SF23 155 280 1.1E-25 T 26-04-2016 smi_1660 0cec12b1c96d401b315eaa8d5a0814fd 292 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 238 272 1.7E-10 T 26-04-2016 IPR001451 Hexapeptide repeat smi_1660 0cec12b1c96d401b315eaa8d5a0814fd 292 PANTHER PTHR23416 155 280 1.1E-25 T 26-04-2016 smi_0950 41ff0865872186f2f26238b84b0f53d1 185 Pfam PF01765 Ribosome recycling factor 21 183 1.6E-62 T 26-04-2016 IPR023584 Ribosome recycling factor domain smi_0950 41ff0865872186f2f26238b84b0f53d1 185 Gene3D G3DSA:1.10.132.20 66 185 3.9E-43 T 26-04-2016 IPR023584 Ribosome recycling factor domain smi_0950 41ff0865872186f2f26238b84b0f53d1 185 SUPERFAMILY SSF55194 3 184 2.62E-68 T 26-04-2016 IPR023584 Ribosome recycling factor domain smi_0950 41ff0865872186f2f26238b84b0f53d1 185 PANTHER PTHR20982 1 185 2.9E-79 T 26-04-2016 IPR002661 Ribosome recycling factor GO:0006412 smi_0950 41ff0865872186f2f26238b84b0f53d1 185 TIGRFAM TIGR00496 frr: ribosome recycling factor 10 185 2.7E-70 T 26-04-2016 IPR002661 Ribosome recycling factor GO:0006412 smi_0950 41ff0865872186f2f26238b84b0f53d1 185 Hamap MF_00040 Ribosome-recycling factor [frr]. 3 185 26.973 T 26-04-2016 IPR002661 Ribosome recycling factor GO:0006412 smi_1533 66c2d92df22b1fbf9a59bbe7db26aa18 242 Pfam PF03883 Protein of unknown function (DUF328) 1 229 1.9E-55 T 26-04-2016 IPR005583 Peroxide stress protein YaaA smi_1533 66c2d92df22b1fbf9a59bbe7db26aa18 242 PANTHER PTHR30283:SF3 2 242 1.1E-88 T 26-04-2016 smi_1533 66c2d92df22b1fbf9a59bbe7db26aa18 242 PANTHER PTHR30283 2 242 1.1E-88 T 26-04-2016 smi_1533 66c2d92df22b1fbf9a59bbe7db26aa18 242 Hamap MF_00652 UPF0246 protein YaaA [yaaA]. 1 241 31.022 T 26-04-2016 IPR005583 Peroxide stress protein YaaA smi_1909 b6ade8ff5d52005f37bc31d53cddc408 196 PIRSF PIRSF000368 9 183 9.0E-71 T 26-04-2016 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic GO:0005737|GO:0043365|GO:0051539|GO:0055114 KEGG: 00351+1.97.1.-|KEGG: 00361+1.97.1.-|KEGG: 00363+1.97.1.-|KEGG: 00625+1.97.1.- smi_1909 b6ade8ff5d52005f37bc31d53cddc408 196 PANTHER PTHR30352 1 193 2.7E-110 T 26-04-2016 smi_1909 b6ade8ff5d52005f37bc31d53cddc408 196 Pfam PF13353 4Fe-4S single cluster domain 28 166 2.5E-51 T 26-04-2016 smi_1909 b6ade8ff5d52005f37bc31d53cddc408 196 SUPERFAMILY SSF102114 40 117 1.96E-8 T 26-04-2016 smi_1909 b6ade8ff5d52005f37bc31d53cddc408 196 TIGRFAM TIGR02491 NrdG: anaerobic ribonucleoside-triphosphate reductase activating protein 19 168 1.7E-59 T 26-04-2016 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic GO:0005737|GO:0043365|GO:0051539|GO:0055114 KEGG: 00351+1.97.1.-|KEGG: 00361+1.97.1.-|KEGG: 00363+1.97.1.-|KEGG: 00625+1.97.1.- smi_1909 b6ade8ff5d52005f37bc31d53cddc408 196 Gene3D G3DSA:3.80.30.10 81 193 1.0E-14 T 26-04-2016 smi_1909 b6ade8ff5d52005f37bc31d53cddc408 196 PANTHER PTHR30352:SF2 1 193 2.7E-110 T 26-04-2016 smi_0206 8e2eefdaae19186fbefb332091ed4a3b 363 PANTHER PTHR30012:SF0 25 363 1.9E-70 T 26-04-2016 smi_0206 8e2eefdaae19186fbefb332091ed4a3b 363 Pfam PF00482 Type II secretion system (T2SS), protein F 234 354 2.0E-19 T 26-04-2016 IPR018076 Type II secretion system F domain smi_0206 8e2eefdaae19186fbefb332091ed4a3b 363 Pfam PF00482 Type II secretion system (T2SS), protein F 49 166 8.1E-11 T 26-04-2016 IPR018076 Type II secretion system F domain smi_0206 8e2eefdaae19186fbefb332091ed4a3b 363 PRINTS PR00812 Bacterial general secretion pathway protein F signature 343 362 9.5E-6 T 26-04-2016 IPR003004 GspF/PilC family smi_0206 8e2eefdaae19186fbefb332091ed4a3b 363 PRINTS PR00812 Bacterial general secretion pathway protein F signature 138 166 9.5E-6 T 26-04-2016 IPR003004 GspF/PilC family smi_0206 8e2eefdaae19186fbefb332091ed4a3b 363 PRINTS PR00812 Bacterial general secretion pathway protein F signature 327 341 9.5E-6 T 26-04-2016 IPR003004 GspF/PilC family smi_0206 8e2eefdaae19186fbefb332091ed4a3b 363 PANTHER PTHR30012 25 363 1.9E-70 T 26-04-2016 smi_0393 349858f1e6c120ae12adcd4b214582d0 264 Pfam PF02661 Fic/DOC family 92 200 1.3E-14 T 26-04-2016 IPR003812 Fido domain smi_0393 349858f1e6c120ae12adcd4b214582d0 264 PANTHER PTHR39560:SF1 32 264 9.4E-63 T 26-04-2016 smi_0393 349858f1e6c120ae12adcd4b214582d0 264 Gene3D G3DSA:1.10.3290.10 72 254 2.9E-29 T 26-04-2016 IPR003812 Fido domain smi_0393 349858f1e6c120ae12adcd4b214582d0 264 SUPERFAMILY SSF140931 81 252 1.31E-25 T 26-04-2016 IPR003812 Fido domain smi_0393 349858f1e6c120ae12adcd4b214582d0 264 PANTHER PTHR39560 32 264 9.4E-63 T 26-04-2016 smi_1606 145fee1fe0680c260509df75de8f2ca0 217 Pfam PF01420 Type I restriction modification DNA specificity domain 16 189 7.9E-17 T 26-04-2016 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 smi_1606 145fee1fe0680c260509df75de8f2ca0 217 SUPERFAMILY SSF116734 15 204 1.64E-34 T 26-04-2016 smi_1348 1c5b7117cf6132042c9d6c32a9f685ea 339 PANTHER PTHR33308 72 327 1.3E-21 T 26-04-2016 smi_1348 1c5b7117cf6132042c9d6c32a9f685ea 339 PANTHER PTHR33308:SF3 72 327 1.3E-21 T 26-04-2016 smi_1348 1c5b7117cf6132042c9d6c32a9f685ea 339 Gene3D G3DSA:2.10.270.10 201 256 2.3E-20 T 26-04-2016 smi_1348 1c5b7117cf6132042c9d6c32a9f685ea 339 Pfam PF01473 Putative cell wall binding repeat 302 319 1.0E-4 T 26-04-2016 IPR018337 Cell wall/choline-binding repeat smi_1348 1c5b7117cf6132042c9d6c32a9f685ea 339 Pfam PF01473 Putative cell wall binding repeat 53 69 0.013 T 26-04-2016 IPR018337 Cell wall/choline-binding repeat smi_1348 1c5b7117cf6132042c9d6c32a9f685ea 339 Pfam PF01473 Putative cell wall binding repeat 155 171 3.1E-4 T 26-04-2016 IPR018337 Cell wall/choline-binding repeat smi_1348 1c5b7117cf6132042c9d6c32a9f685ea 339 Pfam PF01473 Putative cell wall binding repeat 100 110 0.033 T 26-04-2016 IPR018337 Cell wall/choline-binding repeat smi_1348 1c5b7117cf6132042c9d6c32a9f685ea 339 Pfam PF01473 Putative cell wall binding repeat 261 279 4.4E-6 T 26-04-2016 IPR018337 Cell wall/choline-binding repeat smi_1348 1c5b7117cf6132042c9d6c32a9f685ea 339 Pfam PF01473 Putative cell wall binding repeat 281 300 3.0E-4 T 26-04-2016 IPR018337 Cell wall/choline-binding repeat smi_1348 1c5b7117cf6132042c9d6c32a9f685ea 339 Pfam PF01473 Putative cell wall binding repeat 220 238 6.4E-6 T 26-04-2016 IPR018337 Cell wall/choline-binding repeat smi_1348 1c5b7117cf6132042c9d6c32a9f685ea 339 Pfam PF01473 Putative cell wall binding repeat 240 259 0.0016 T 26-04-2016 IPR018337 Cell wall/choline-binding repeat smi_1348 1c5b7117cf6132042c9d6c32a9f685ea 339 Gene3D G3DSA:2.20.120.10 35 76 6.5E-8 T 26-04-2016 smi_1348 1c5b7117cf6132042c9d6c32a9f685ea 339 Gene3D G3DSA:2.20.120.10 142 173 7.0E-7 T 26-04-2016 smi_1348 1c5b7117cf6132042c9d6c32a9f685ea 339 Gene3D G3DSA:2.20.120.10 257 287 1.2E-17 T 26-04-2016 smi_1348 1c5b7117cf6132042c9d6c32a9f685ea 339 SUPERFAMILY SSF69360 141 338 5.49E-58 T 26-04-2016 smi_1348 1c5b7117cf6132042c9d6c32a9f685ea 339 SUPERFAMILY SSF69360 38 77 5.49E-58 T 26-04-2016 smi_1348 1c5b7117cf6132042c9d6c32a9f685ea 339 Gene3D G3DSA:2.10.270.10 288 336 2.6E-11 T 26-04-2016 smi_1531 9833fdb1a5c4cc2b221cb2e4b351cefb 2997 TIGRFAM TIGR01168 YSIRK_signal: gram-positive signal peptide, YSIRK family 15 45 3.2E-10 T 26-04-2016 IPR005877 YSIRK Gram-positive signal peptide GO:0016020 smi_1531 9833fdb1a5c4cc2b221cb2e4b351cefb 2997 TIGRFAM TIGR01167 LPXTG_anchor: LPXTG cell wall anchor domain 2966 2995 0.0027 T 26-04-2016 IPR019931 LPXTG cell wall anchor domain smi_1531 9833fdb1a5c4cc2b221cb2e4b351cefb 2997 TIGRFAM TIGR04203 RPT_S_cricet: Streptococcal surface-anchored protein repeat, S. criceti family 2397 2433 7.3E-11 T 26-04-2016 IPR026394 Streptococcal surface-anchored protein repeat, S. criceti family smi_1531 9833fdb1a5c4cc2b221cb2e4b351cefb 2997 TIGRFAM TIGR04203 RPT_S_cricet: Streptococcal surface-anchored protein repeat, S. criceti family 788 825 5.9E-11 T 26-04-2016 IPR026394 Streptococcal surface-anchored protein repeat, S. criceti family smi_1531 9833fdb1a5c4cc2b221cb2e4b351cefb 2997 TIGRFAM TIGR04203 RPT_S_cricet: Streptococcal surface-anchored protein repeat, S. criceti family 988 1025 5.9E-11 T 26-04-2016 IPR026394 Streptococcal surface-anchored protein repeat, S. criceti family smi_1531 9833fdb1a5c4cc2b221cb2e4b351cefb 2997 TIGRFAM TIGR04203 RPT_S_cricet: Streptococcal surface-anchored protein repeat, S. criceti family 2613 2649 4.8E-11 T 26-04-2016 IPR026394 Streptococcal surface-anchored protein repeat, S. criceti family smi_1531 9833fdb1a5c4cc2b221cb2e4b351cefb 2997 TIGRFAM TIGR04203 RPT_S_cricet: Streptococcal surface-anchored protein repeat, S. criceti family 2718 2754 1.0E-14 T 26-04-2016 IPR026394 Streptococcal surface-anchored protein repeat, S. criceti family smi_1531 9833fdb1a5c4cc2b221cb2e4b351cefb 2997 TIGRFAM TIGR04203 RPT_S_cricet: Streptococcal surface-anchored protein repeat, S. criceti family 2681 2717 4.0E-10 T 26-04-2016 IPR026394 Streptococcal surface-anchored protein repeat, S. criceti family smi_1531 9833fdb1a5c4cc2b221cb2e4b351cefb 2997 TIGRFAM TIGR04203 RPT_S_cricet: Streptococcal surface-anchored protein repeat, S. criceti family 2360 2396 1.6E-13 T 26-04-2016 IPR026394 Streptococcal surface-anchored protein repeat, S. criceti family smi_1531 9833fdb1a5c4cc2b221cb2e4b351cefb 2997 TIGRFAM TIGR04203 RPT_S_cricet: Streptococcal surface-anchored protein repeat, S. criceti family 2434 2470 8.0E-12 T 26-04-2016 IPR026394 Streptococcal surface-anchored protein repeat, S. criceti family smi_1531 9833fdb1a5c4cc2b221cb2e4b351cefb 2997 TIGRFAM TIGR04203 RPT_S_cricet: Streptococcal surface-anchored protein repeat, S. criceti family 2511 2546 9.5E-12 T 26-04-2016 IPR026394 Streptococcal surface-anchored protein repeat, S. criceti family smi_1531 9833fdb1a5c4cc2b221cb2e4b351cefb 2997 TIGRFAM TIGR04203 RPT_S_cricet: Streptococcal surface-anchored protein repeat, S. criceti family 2755 2791 3.2E-12 T 26-04-2016 IPR026394 Streptococcal surface-anchored protein repeat, S. criceti family smi_1531 9833fdb1a5c4cc2b221cb2e4b351cefb 2997 TIGRFAM TIGR04203 RPT_S_cricet: Streptococcal surface-anchored protein repeat, S. criceti family 2471 2507 1.4E-11 T 26-04-2016 IPR026394 Streptococcal surface-anchored protein repeat, S. criceti family smi_1531 9833fdb1a5c4cc2b221cb2e4b351cefb 2997 Pfam PF07501 G5 domain 473 543 2.0E-11 T 26-04-2016 IPR011098 G5 domain smi_1531 9833fdb1a5c4cc2b221cb2e4b351cefb 2997 PANTHER PTHR24023 1475 1507 1.4E-174 T 26-04-2016 smi_1531 9833fdb1a5c4cc2b221cb2e4b351cefb 2997 PANTHER PTHR24023 1565 1644 1.4E-174 T 26-04-2016 smi_1531 9833fdb1a5c4cc2b221cb2e4b351cefb 2997 PANTHER PTHR24023 1695 1730 1.4E-174 T 26-04-2016 smi_1531 9833fdb1a5c4cc2b221cb2e4b351cefb 2997 PANTHER PTHR24023 2616 2786 1.4E-174 T 26-04-2016 smi_1531 9833fdb1a5c4cc2b221cb2e4b351cefb 2997 PANTHER PTHR24023 1055 1094 1.4E-174 T 26-04-2016 smi_1531 9833fdb1a5c4cc2b221cb2e4b351cefb 2997 PANTHER PTHR24023 310 776 1.4E-174 T 26-04-2016 smi_1531 9833fdb1a5c4cc2b221cb2e4b351cefb 2997 PANTHER PTHR24023 831 985 1.4E-174 T 26-04-2016 smi_1531 9833fdb1a5c4cc2b221cb2e4b351cefb 2997 PANTHER PTHR24023 1279 1339 1.4E-174 T 26-04-2016 smi_1531 9833fdb1a5c4cc2b221cb2e4b351cefb 2997 PANTHER PTHR24023 2975 2985 1.4E-174 T 26-04-2016 smi_1531 9833fdb1a5c4cc2b221cb2e4b351cefb 2997 SMART SM01208 467 545 1.1E-12 T 26-04-2016 IPR011098 G5 domain smi_1531 9833fdb1a5c4cc2b221cb2e4b351cefb 2997 Pfam PF01391 Collagen triple helix repeat (20 copies) 1287 1344 3.7E-8 T 26-04-2016 IPR008160 Collagen triple helix repeat smi_1531 9833fdb1a5c4cc2b221cb2e4b351cefb 2997 Pfam PF01391 Collagen triple helix repeat (20 copies) 593 648 1.4E-8 T 26-04-2016 IPR008160 Collagen triple helix repeat smi_1531 9833fdb1a5c4cc2b221cb2e4b351cefb 2997 Pfam PF01391 Collagen triple helix repeat (20 copies) 929 986 9.7E-9 T 26-04-2016 IPR008160 Collagen triple helix repeat smi_1531 9833fdb1a5c4cc2b221cb2e4b351cefb 2997 Pfam PF01391 Collagen triple helix repeat (20 copies) 633 684 8.2E-7 T 26-04-2016 IPR008160 Collagen triple helix repeat smi_1531 9833fdb1a5c4cc2b221cb2e4b351cefb 2997 Pfam PF01391 Collagen triple helix repeat (20 copies) 869 927 2.5E-9 T 26-04-2016 IPR008160 Collagen triple helix repeat smi_1531 9833fdb1a5c4cc2b221cb2e4b351cefb 2997 Pfam PF01391 Collagen triple helix repeat (20 copies) 729 786 6.8E-9 T 26-04-2016 IPR008160 Collagen triple helix repeat smi_1531 9833fdb1a5c4cc2b221cb2e4b351cefb 2997 Pfam PF01391 Collagen triple helix repeat (20 copies) 684 737 2.8E-7 T 26-04-2016 IPR008160 Collagen triple helix repeat smi_1531 9833fdb1a5c4cc2b221cb2e4b351cefb 2997 PANTHER PTHR24023:SF545 1475 1507 1.4E-174 T 26-04-2016 smi_1531 9833fdb1a5c4cc2b221cb2e4b351cefb 2997 PANTHER PTHR24023:SF545 1565 1644 1.4E-174 T 26-04-2016 smi_1531 9833fdb1a5c4cc2b221cb2e4b351cefb 2997 PANTHER PTHR24023:SF545 1695 1730 1.4E-174 T 26-04-2016 smi_1531 9833fdb1a5c4cc2b221cb2e4b351cefb 2997 PANTHER PTHR24023:SF545 2616 2786 1.4E-174 T 26-04-2016 smi_1531 9833fdb1a5c4cc2b221cb2e4b351cefb 2997 PANTHER PTHR24023:SF545 1055 1094 1.4E-174 T 26-04-2016 smi_1531 9833fdb1a5c4cc2b221cb2e4b351cefb 2997 PANTHER PTHR24023:SF545 310 776 1.4E-174 T 26-04-2016 smi_1531 9833fdb1a5c4cc2b221cb2e4b351cefb 2997 PANTHER PTHR24023:SF545 831 985 1.4E-174 T 26-04-2016 smi_1531 9833fdb1a5c4cc2b221cb2e4b351cefb 2997 PANTHER PTHR24023:SF545 1279 1339 1.4E-174 T 26-04-2016 smi_1531 9833fdb1a5c4cc2b221cb2e4b351cefb 2997 PANTHER PTHR24023:SF545 2975 2985 1.4E-174 T 26-04-2016 smi_1531 9833fdb1a5c4cc2b221cb2e4b351cefb 2997 Pfam PF04650 YSIRK type signal peptide 15 38 1.3E-9 T 26-04-2016 IPR005877 YSIRK Gram-positive signal peptide GO:0016020 smi_1330 e94e8173582ec9788092ef78101a4e12 817 PIRSF PIRSF015040 1 817 3.7E-280 T 26-04-2016 IPR016628 ATPase, SAG2001, predicted smi_1330 e94e8173582ec9788092ef78101a4e12 817 SUPERFAMILY SSF52540 409 800 3.98E-31 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1330 e94e8173582ec9788092ef78101a4e12 817 Gene3D G3DSA:3.40.50.300 468 528 1.2E-21 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1330 e94e8173582ec9788092ef78101a4e12 817 Gene3D G3DSA:3.40.50.300 635 800 1.2E-21 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1330 e94e8173582ec9788092ef78101a4e12 817 Pfam PF12846 AAA-like domain 444 805 5.8E-151 T 26-04-2016 smi_0914 602adf9dd21d20a487a2246b1bb40d37 64 Pfam PF11676 Protein of unknown function (DUF3272) 2 60 1.1E-31 T 26-04-2016 IPR021690 Protein of unknown function DUF3272 smi_1497 9023c20081bb8a2c504045d9b39c367b 445 PANTHER PTHR11785 1 445 1.1E-118 T 26-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 smi_1497 9023c20081bb8a2c504045d9b39c367b 445 PANTHER PTHR11785:SF29 1 445 1.1E-118 T 26-04-2016 smi_1497 9023c20081bb8a2c504045d9b39c367b 445 Pfam PF00324 Amino acid permease 9 429 9.9E-81 T 26-04-2016 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 smi_1497 9023c20081bb8a2c504045d9b39c367b 445 ProSitePatterns PS00218 Amino acid permeases signature. 34 64 - T 26-04-2016 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 smi_1497 9023c20081bb8a2c504045d9b39c367b 445 PIRSF PIRSF006060 1 445 1.4E-54 T 26-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 smi_0181 fe4644ace8a60dabb8ac87b0c75c7606 67 Pfam PF11372 Domain of unknown function (DUF3173) 4 60 4.7E-25 T 26-04-2016 IPR021512 Protein of unknown function DUF3173 smi_0186 17cfeb344ac7f21f77b106d0ed5b8f60 440 Pfam PF01580 FtsK/SpoIIIE family 202 372 5.1E-15 T 26-04-2016 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 smi_0186 17cfeb344ac7f21f77b106d0ed5b8f60 440 Gene3D G3DSA:3.40.50.300 190 433 1.3E-27 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0186 17cfeb344ac7f21f77b106d0ed5b8f60 440 PANTHER PTHR22683:SF44 204 402 6.0E-30 T 26-04-2016 smi_0186 17cfeb344ac7f21f77b106d0ed5b8f60 440 PANTHER PTHR22683 204 402 6.0E-30 T 26-04-2016 smi_0186 17cfeb344ac7f21f77b106d0ed5b8f60 440 SMART SM00382 204 376 1.7E-4 T 26-04-2016 IPR003593 AAA+ ATPase domain smi_0186 17cfeb344ac7f21f77b106d0ed5b8f60 440 SUPERFAMILY SSF52540 190 387 9.43E-22 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0531 b11572857d75c67ffa1521e8c35640a3 299 PANTHER PTHR35797:SF1 3 255 4.2E-20 T 26-04-2016 smi_0531 b11572857d75c67ffa1521e8c35640a3 299 Pfam PF02517 CAAX protease self-immunity 147 246 1.4E-9 T 26-04-2016 IPR003675 CAAX amino terminal protease GO:0016020 smi_0531 b11572857d75c67ffa1521e8c35640a3 299 PANTHER PTHR35797 3 255 4.2E-20 T 26-04-2016 smi_0809 f89bcabe919ec0da2839fd7b73db2450 117 PANTHER PTHR33360:SF2 2 117 7.4E-53 T 26-04-2016 smi_0809 f89bcabe919ec0da2839fd7b73db2450 117 PANTHER PTHR33360 2 117 7.4E-53 T 26-04-2016 smi_0809 f89bcabe919ec0da2839fd7b73db2450 117 SUPERFAMILY SSF143422 3 116 6.54E-42 T 26-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 smi_0809 f89bcabe919ec0da2839fd7b73db2450 117 Pfam PF01797 Transposase IS200 like 3 116 5.8E-37 T 26-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 smi_0809 f89bcabe919ec0da2839fd7b73db2450 117 Gene3D G3DSA:3.30.70.1290 3 116 3.9E-50 T 26-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 smi_0809 f89bcabe919ec0da2839fd7b73db2450 117 SMART SM01321 1 116 4.9E-36 T 26-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 smi_1985 a51c48ec5b3e4e816d7f27f9726cdbbb 108 PANTHER PTHR33169:SF3 10 100 7.7E-23 T 26-04-2016 smi_1985 a51c48ec5b3e4e816d7f27f9726cdbbb 108 Gene3D G3DSA:1.10.10.10 8 101 3.6E-24 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain smi_1985 a51c48ec5b3e4e816d7f27f9726cdbbb 108 PANTHER PTHR33169 10 100 7.7E-23 T 26-04-2016 smi_1985 a51c48ec5b3e4e816d7f27f9726cdbbb 108 Pfam PF03551 Transcriptional regulator PadR-like family 14 81 9.2E-17 T 26-04-2016 IPR005149 Transcription regulator PadR, N-terminal smi_1985 a51c48ec5b3e4e816d7f27f9726cdbbb 108 SUPERFAMILY SSF46785 7 103 6.67E-21 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain smi_0846 383451cb8c370f7287342a453c43be6e 159 Pfam PF00293 NUDIX domain 6 126 3.3E-9 T 26-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 smi_0846 383451cb8c370f7287342a453c43be6e 159 SUPERFAMILY SSF55811 5 139 7.04E-23 T 26-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 smi_0846 383451cb8c370f7287342a453c43be6e 159 PANTHER PTHR22769 3 133 1.0E-23 T 26-04-2016 smi_0846 383451cb8c370f7287342a453c43be6e 159 Gene3D G3DSA:3.90.79.10 4 137 4.1E-23 T 26-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 smi_0846 383451cb8c370f7287342a453c43be6e 159 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 26-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 smi_0846 383451cb8c370f7287342a453c43be6e 159 PANTHER PTHR22769:SF14 3 133 1.0E-23 T 26-04-2016 smi_1185 b07a6bce05ab472dd9f0246d63775f0e 360 SUPERFAMILY SSF53383 3 358 2.31E-88 T 26-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase smi_1185 b07a6bce05ab472dd9f0246d63775f0e 360 PIRSF PIRSF005572 1 359 1.3E-104 T 26-04-2016 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 smi_1185 b07a6bce05ab472dd9f0246d63775f0e 360 PANTHER PTHR11601:SF20 1 358 4.1E-135 T 26-04-2016 smi_1185 b07a6bce05ab472dd9f0246d63775f0e 360 Gene3D G3DSA:3.40.640.10 5 232 8.2E-79 T 26-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 smi_1185 b07a6bce05ab472dd9f0246d63775f0e 360 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 180 199 - T 26-04-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site smi_1185 b07a6bce05ab472dd9f0246d63775f0e 360 PANTHER PTHR11601 1 358 4.1E-135 T 26-04-2016 smi_1185 b07a6bce05ab472dd9f0246d63775f0e 360 Pfam PF00266 Aminotransferase class-V 5 350 7.7E-67 T 26-04-2016 IPR000192 Aminotransferase class V domain smi_1185 b07a6bce05ab472dd9f0246d63775f0e 360 Gene3D G3DSA:3.90.1150.10 233 357 7.3E-30 T 26-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 smi_0057 98e8690e6ed045aa87322a17b35c1b4c 389 Pfam PF01473 Putative cell wall binding repeat 108 126 0.0039 T 26-04-2016 IPR018337 Cell wall/choline-binding repeat smi_0057 98e8690e6ed045aa87322a17b35c1b4c 389 Pfam PF01473 Putative cell wall binding repeat 88 106 0.053 T 26-04-2016 IPR018337 Cell wall/choline-binding repeat smi_0057 98e8690e6ed045aa87322a17b35c1b4c 389 Pfam PF01473 Putative cell wall binding repeat 128 146 3.0E-4 T 26-04-2016 IPR018337 Cell wall/choline-binding repeat smi_0057 98e8690e6ed045aa87322a17b35c1b4c 389 Pfam PF01473 Putative cell wall binding repeat 49 66 1.7E-4 T 26-04-2016 IPR018337 Cell wall/choline-binding repeat smi_0057 98e8690e6ed045aa87322a17b35c1b4c 389 Pfam PF01473 Putative cell wall binding repeat 68 86 0.026 T 26-04-2016 IPR018337 Cell wall/choline-binding repeat smi_0057 98e8690e6ed045aa87322a17b35c1b4c 389 Gene3D G3DSA:2.10.270.10 250 265 5.7E-17 T 26-04-2016 smi_0057 98e8690e6ed045aa87322a17b35c1b4c 389 Gene3D G3DSA:2.10.270.10 103 172 5.7E-17 T 26-04-2016 smi_0057 98e8690e6ed045aa87322a17b35c1b4c 389 Gene3D G3DSA:2.10.270.10 28 102 1.1E-20 T 26-04-2016 smi_0057 98e8690e6ed045aa87322a17b35c1b4c 389 SUPERFAMILY SSF69360 23 168 2.16E-38 T 26-04-2016 smi_0057 98e8690e6ed045aa87322a17b35c1b4c 389 SUPERFAMILY SSF69360 255 328 2.55E-5 T 26-04-2016 smi_0677 7ad4e7ab0662f985aee323a35d5a6823 257 Pfam PF08543 Phosphomethylpyrimidine kinase 13 247 2.2E-63 T 26-04-2016 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase UniPathway: UPA00647 smi_0677 7ad4e7ab0662f985aee323a35d5a6823 257 PANTHER PTHR20858 5 255 2.4E-68 T 26-04-2016 smi_0677 7ad4e7ab0662f985aee323a35d5a6823 257 Gene3D G3DSA:3.40.1190.20 4 251 1.5E-66 T 26-04-2016 IPR029056 Ribokinase-like smi_0677 7ad4e7ab0662f985aee323a35d5a6823 257 SUPERFAMILY SSF53613 4 247 5.46E-57 T 26-04-2016 IPR029056 Ribokinase-like smi_1125 a9eb369da3e9366409d4be08b68a211d 209 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 13 197 3.1E-49 T 26-04-2016 IPR006070 YrdC-like domain GO:0003725 smi_1125 a9eb369da3e9366409d4be08b68a211d 209 SUPERFAMILY SSF55821 4 203 1.77E-55 T 26-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain smi_1125 a9eb369da3e9366409d4be08b68a211d 209 PANTHER PTHR17490 9 209 1.9E-62 T 26-04-2016 smi_1125 a9eb369da3e9366409d4be08b68a211d 209 Pfam PF01300 Telomere recombination 18 190 7.6E-46 T 26-04-2016 IPR006070 YrdC-like domain GO:0003725 smi_1125 a9eb369da3e9366409d4be08b68a211d 209 Gene3D G3DSA:3.90.870.10 12 197 3.3E-59 T 26-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain smi_0632 8ffbcbb09edcf3da5a0d83d2b32fee20 902 Pfam PF12704 MacB-like periplasmic core domain 549 733 1.9E-6 T 26-04-2016 IPR025857 MacB-like periplasmic core domain smi_0632 8ffbcbb09edcf3da5a0d83d2b32fee20 902 Pfam PF02687 FtsX-like permease family 382 500 2.9E-16 T 26-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 smi_0632 8ffbcbb09edcf3da5a0d83d2b32fee20 902 Pfam PF02687 FtsX-like permease family 776 883 1.6E-17 T 26-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 smi_0632 8ffbcbb09edcf3da5a0d83d2b32fee20 902 PANTHER PTHR30489:SF11 21 506 4.3E-197 T 26-04-2016 smi_0632 8ffbcbb09edcf3da5a0d83d2b32fee20 902 PANTHER PTHR30489 21 506 4.3E-197 T 26-04-2016 smi_0675 beef7e54ec2a40122dd92b1125c5f2ff 383 SUPERFAMILY SSF103473 9 381 1.07E-40 T 26-04-2016 IPR020846 Major facilitator superfamily domain smi_0675 beef7e54ec2a40122dd92b1125c5f2ff 383 Gene3D G3DSA:1.20.1250.20 208 382 1.1E-11 T 26-04-2016 smi_0675 beef7e54ec2a40122dd92b1125c5f2ff 383 Pfam PF07690 Major Facilitator Superfamily 11 269 1.3E-21 T 26-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 smi_0675 beef7e54ec2a40122dd92b1125c5f2ff 383 Gene3D G3DSA:1.20.1250.20 9 192 1.7E-21 T 26-04-2016 smi_0954 d48c75335b7adc7360c54c36f5de1121 189 Pfam PF13302 Acetyltransferase (GNAT) domain 18 154 6.8E-34 T 26-04-2016 IPR000182 GNAT domain GO:0008080 smi_0954 d48c75335b7adc7360c54c36f5de1121 189 SUPERFAMILY SSF55729 11 155 4.18E-42 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase smi_0954 d48c75335b7adc7360c54c36f5de1121 189 Gene3D G3DSA:3.40.630.30 12 185 5.4E-48 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase smi_0954 d48c75335b7adc7360c54c36f5de1121 189 PANTHER PTHR13256:SF31 3 189 5.4E-116 T 26-04-2016 smi_0954 d48c75335b7adc7360c54c36f5de1121 189 PANTHER PTHR13256 3 189 5.4E-116 T 26-04-2016 smi_1751 ca7947de5d87ce70dce9774b00060323 464 Hamap MF_01941 Mid-cell-anchored protein Z [mapZ]. 1 464 24.808 T 26-04-2016 IPR030858 Mid-cell-anchored protein Z GO:0016021|GO:0051301 smi_1276 9b1eb86c58edb624f1ac82dc0e40d347 562 PANTHER PTHR31632:SF4 298 557 1.3E-56 T 26-04-2016 smi_1276 9b1eb86c58edb624f1ac82dc0e40d347 562 Pfam PF03239 Iron permease FTR1 family 287 478 5.2E-16 T 26-04-2016 IPR004923 Iron permease FTR1/Fip1/EfeU GO:0005381|GO:0006827|GO:0016020|GO:0033573 smi_1276 9b1eb86c58edb624f1ac82dc0e40d347 562 PANTHER PTHR31632 298 557 1.3E-56 T 26-04-2016 IPR004923 Iron permease FTR1/Fip1/EfeU GO:0005381|GO:0006827|GO:0016020|GO:0033573 smi_1871 9ca4fd1090d65a51c18b16b4b5ba3be9 288 Gene3D G3DSA:3.40.50.300 2 213 8.3E-66 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1871 9ca4fd1090d65a51c18b16b4b5ba3be9 288 SMART SM00382 29 203 1.3E-9 T 26-04-2016 IPR003593 AAA+ ATPase domain smi_1871 9ca4fd1090d65a51c18b16b4b5ba3be9 288 ProSitePatterns PS00211 ABC transporters family signature. 121 135 - T 26-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 smi_1871 9ca4fd1090d65a51c18b16b4b5ba3be9 288 PANTHER PTHR24220 260 288 3.1E-79 T 26-04-2016 smi_1871 9ca4fd1090d65a51c18b16b4b5ba3be9 288 PANTHER PTHR24220 4 226 3.1E-79 T 26-04-2016 smi_1871 9ca4fd1090d65a51c18b16b4b5ba3be9 288 Pfam PF00005 ABC transporter 19 148 3.2E-30 T 26-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 smi_1871 9ca4fd1090d65a51c18b16b4b5ba3be9 288 PANTHER PTHR24220:SF429 260 288 3.1E-79 T 26-04-2016 smi_1871 9ca4fd1090d65a51c18b16b4b5ba3be9 288 PANTHER PTHR24220:SF429 4 226 3.1E-79 T 26-04-2016 smi_1871 9ca4fd1090d65a51c18b16b4b5ba3be9 288 SUPERFAMILY SSF52540 2 210 3.58E-60 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0898 96e5b719cb69b8cc0b54e6141d0f1b74 214 Pfam PF03235 Protein of unknown function DUF262 22 166 2.3E-20 T 26-04-2016 IPR004919 Domain of unknown function DUF262 smi_0898 96e5b719cb69b8cc0b54e6141d0f1b74 214 SUPERFAMILY SSF110849 22 90 8.2E-5 T 26-04-2016 IPR003115 ParB/Sulfiredoxin smi_1270 8eb91ed3119cc4082dcd6f298adcfd38 311 Pfam PF01368 DHH family 17 152 1.7E-11 T 26-04-2016 IPR001667 DDH domain smi_1270 8eb91ed3119cc4082dcd6f298adcfd38 311 SUPERFAMILY SSF64182 14 302 6.8E-72 T 26-04-2016 smi_1270 8eb91ed3119cc4082dcd6f298adcfd38 311 Gene3D G3DSA:3.90.1640.10 15 189 1.0E-28 T 26-04-2016 smi_1992 6c7c4c94b29864d8bf47743fb898dea9 229 Pfam PF02517 CAAX protease self-immunity 126 213 1.7E-13 T 26-04-2016 IPR003675 CAAX amino terminal protease GO:0016020 smi_1202 d70d71efb23f8aea6313167ef958ee69 317 Pfam PF02517 CAAX protease self-immunity 160 251 3.6E-13 T 26-04-2016 IPR003675 CAAX amino terminal protease GO:0016020 smi_1202 d70d71efb23f8aea6313167ef958ee69 317 PANTHER PTHR39430 1 317 2.2E-76 T 26-04-2016 smi_1948 4ef79ca7ce8daedcdfc57e17cfebc7cf 231 Pfam PF03591 AzlC protein 15 154 6.1E-32 T 26-04-2016 IPR011606 Branched-chain amino acid transport, permease smi_1948 4ef79ca7ce8daedcdfc57e17cfebc7cf 231 PANTHER PTHR34979 6 228 3.7E-55 T 26-04-2016 smi_2064 e51d7fb5806b33df52550f0265e9d298 164 Pfam PF04093 rod shape-determining protein MreD 5 163 2.8E-35 T 26-04-2016 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 smi_2064 e51d7fb5806b33df52550f0265e9d298 164 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 11 158 2.8E-19 T 26-04-2016 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 smi_1955 a28b769c38bee27e78bc61bd40cb76f5 61 TIGRFAM TIGR03949 bact_IIb_cerein: class IIb bacteriocin, lactobin A/cerein 7B family 11 59 2.1E-8 T 26-04-2016 IPR023991 Bacteriocin, class IIb, lactobin A/cerein 7B family smi_0199 6fce28236c080008c58fee72a2a34b68 380 PANTHER PTHR21148 1 371 7.4E-176 T 26-04-2016 smi_0199 6fce28236c080008c58fee72a2a34b68 380 Gene3D G3DSA:3.20.20.105 3 373 1.3E-162 T 26-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 smi_0199 6fce28236c080008c58fee72a2a34b68 380 Pfam PF01702 Queuine tRNA-ribosyltransferase 134 366 7.5E-88 T 26-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 smi_0199 6fce28236c080008c58fee72a2a34b68 380 PANTHER PTHR21148:SF26 1 371 7.4E-176 T 26-04-2016 smi_0199 6fce28236c080008c58fee72a2a34b68 380 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 8 374 5.0E-162 T 26-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 smi_0199 6fce28236c080008c58fee72a2a34b68 380 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 8 375 5.4E-170 T 26-04-2016 IPR004803 Queuine tRNA-ribosyltransferase GO:0008033|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 smi_0199 6fce28236c080008c58fee72a2a34b68 380 SUPERFAMILY SSF51713 7 371 7.85E-154 T 26-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 smi_0199 6fce28236c080008c58fee72a2a34b68 380 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 6 365 56.124 T 26-04-2016 IPR004803 Queuine tRNA-ribosyltransferase GO:0008033|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 smi_1620 d46b22d2043ef45ee1882a2a28fca455 149 PANTHER PTHR34390 1 140 1.6E-34 T 26-04-2016 smi_1620 d46b22d2043ef45ee1882a2a28fca455 149 Pfam PF12821 Threonine/Serine exporter, ThrE 9 135 4.2E-18 T 26-04-2016 IPR024528 Threonine/Serine exporter, ThrE smi_0711 aa499e9fdd849b9a25bb7f5cdc28aea2 684 PANTHER PTHR10110 1 673 3.5E-220 T 26-04-2016 IPR018422 Cation/H+ exchanger, CPA1 family GO:0006812|GO:0015299|GO:0016021 Reactome: REACT_15518 smi_0711 aa499e9fdd849b9a25bb7f5cdc28aea2 684 Pfam PF00999 Sodium/hydrogen exchanger family 8 399 1.1E-45 T 26-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 smi_0711 aa499e9fdd849b9a25bb7f5cdc28aea2 684 PANTHER PTHR10110:SF120 1 673 3.5E-220 T 26-04-2016 smi_1773 69763168dc980bc2e8d056d72d129b19 192 Pfam PF11683 Protein of unknown function (DUF3278) 1 128 2.9E-11 T 26-04-2016 IPR021697 Protein of unknown function DUF3278 smi_1740 1c36fd30d58783292d9fd50aacad533a 144 PANTHER PTHR34070:SF1 13 141 2.8E-38 T 26-04-2016 smi_1740 1c36fd30d58783292d9fd50aacad533a 144 Pfam PF08713 DNA alkylation repair enzyme 3 141 7.5E-43 T 26-04-2016 IPR014825 DNA alkylation repair enzyme smi_1740 1c36fd30d58783292d9fd50aacad533a 144 Gene3D G3DSA:1.25.40.290 47 141 2.1E-38 T 26-04-2016 smi_1740 1c36fd30d58783292d9fd50aacad533a 144 PANTHER PTHR34070 13 141 2.8E-38 T 26-04-2016 smi_1740 1c36fd30d58783292d9fd50aacad533a 144 SUPERFAMILY SSF48371 5 142 2.3E-36 T 26-04-2016 IPR016024 Armadillo-type fold GO:0005488 smi_0213 92bc28422f94105bb77381aa533749d1 317 SUPERFAMILY SSF53335 29 290 3.22E-37 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase smi_0213 92bc28422f94105bb77381aa533749d1 317 PANTHER PTHR41313 2 317 3.2E-140 T 26-04-2016 smi_0213 92bc28422f94105bb77381aa533749d1 317 Gene3D G3DSA:3.40.50.150 89 296 1.6E-22 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase smi_0213 92bc28422f94105bb77381aa533749d1 317 Pfam PF02384 N-6 DNA Methylase 69 282 7.5E-8 T 26-04-2016 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 smi_0388 ef09aff592f2b64a4b1630ad2301cf17 192 Pfam PF13238 AAA domain 4 141 5.5E-10 T 26-04-2016 smi_0388 ef09aff592f2b64a4b1630ad2301cf17 192 SUPERFAMILY SSF52540 2 183 2.32E-14 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_0388 ef09aff592f2b64a4b1630ad2301cf17 192 Gene3D G3DSA:3.40.50.300 2 184 1.7E-12 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1200 e38f22d64015eac5fbc40d5d3faaa667 187 PANTHER PTHR13256 2 186 1.1E-97 T 26-04-2016 smi_1200 e38f22d64015eac5fbc40d5d3faaa667 187 SUPERFAMILY SSF55729 2 170 5.78E-25 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase smi_1200 e38f22d64015eac5fbc40d5d3faaa667 187 PANTHER PTHR13256:SF48 2 186 1.1E-97 T 26-04-2016 smi_1200 e38f22d64015eac5fbc40d5d3faaa667 187 Pfam PF13302 Acetyltransferase (GNAT) domain 3 145 3.6E-11 T 26-04-2016 IPR000182 GNAT domain GO:0008080 smi_1200 e38f22d64015eac5fbc40d5d3faaa667 187 Gene3D G3DSA:3.40.630.30 2 175 9.3E-26 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase smi_1997 35febb358139597d643620875346c003 293 SUPERFAMILY SSF53067 5 289 4.41E-50 T 26-04-2016 smi_1997 35febb358139597d643620875346c003 293 PANTHER PTHR18964 10 288 1.8E-110 T 26-04-2016 smi_1997 35febb358139597d643620875346c003 293 Gene3D G3DSA:3.30.420.40 103 291 4.9E-60 T 26-04-2016 smi_1997 35febb358139597d643620875346c003 293 Pfam PF00480 ROK family 9 286 4.0E-40 T 26-04-2016 IPR000600 ROK family smi_1997 35febb358139597d643620875346c003 293 PANTHER PTHR18964:SF121 10 288 1.8E-110 T 26-04-2016 smi_1997 35febb358139597d643620875346c003 293 Gene3D G3DSA:3.30.420.40 4 102 1.4E-35 T 26-04-2016 smi_0925 2584fa31b49af13d460e2b525ebf6f92 388 Gene3D G3DSA:3.30.420.10 209 358 9.8E-6 T 26-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 smi_0925 2584fa31b49af13d460e2b525ebf6f92 388 Pfam PF13936 Helix-turn-helix domain 4 47 1.4E-16 T 26-04-2016 IPR025246 Transposase IS30-like HTH domain smi_0925 2584fa31b49af13d460e2b525ebf6f92 388 SUPERFAMILY SSF53098 207 358 1.97E-9 T 26-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 smi_0925 2584fa31b49af13d460e2b525ebf6f92 388 PANTHER PTHR10948 1 372 4.7E-16 T 26-04-2016 smi_1023 4c1cafb16748a67a3e79233ae182b84d 101 SUPERFAMILY SSF52794 1 76 1.52E-12 T 26-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 smi_1023 4c1cafb16748a67a3e79233ae182b84d 101 Gene3D G3DSA:3.40.50.270 1 78 9.1E-12 T 26-04-2016 smi_1023 4c1cafb16748a67a3e79233ae182b84d 101 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 3 55 1.8E-8 T 26-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 smi_1551 2ee305c13cdcaf5ddea2b59cbd1f0357 259 PANTHER PTHR37804 1 259 1.2E-52 T 26-04-2016 smi_1551 2ee305c13cdcaf5ddea2b59cbd1f0357 259 Pfam PF07949 YbbR-like protein 147 217 1.4E-6 T 26-04-2016 IPR012505 YbbR-like smi_1551 2ee305c13cdcaf5ddea2b59cbd1f0357 259 Pfam PF07949 YbbR-like protein 48 131 2.4E-10 T 26-04-2016 IPR012505 YbbR-like smi_1762 70896bd071f361bd3927348522b943a0 494 Gene3D G3DSA:1.20.1570.10 208 246 9.4E-50 T 26-04-2016 smi_1762 70896bd071f361bd3927348522b943a0 494 Gene3D G3DSA:1.20.1570.10 283 340 9.4E-50 T 26-04-2016 smi_1762 70896bd071f361bd3927348522b943a0 494 Hamap MF_01567 UPF0371 protein . 2 494 59.273 T 26-04-2016 IPR014999 Uncharacterised protein family UPF0371 smi_1762 70896bd071f361bd3927348522b943a0 494 PIRSF PIRSF033132 2 494 1.8E-257 T 26-04-2016 IPR014999 Uncharacterised protein family UPF0371 smi_1762 70896bd071f361bd3927348522b943a0 494 Pfam PF08903 Domain of unknown function (DUF1846) 5 492 1.3E-238 T 26-04-2016 IPR014999 Uncharacterised protein family UPF0371 smi_1762 70896bd071f361bd3927348522b943a0 494 Gene3D G3DSA:3.10.630.10 253 282 2.8E-128 T 26-04-2016 smi_1762 70896bd071f361bd3927348522b943a0 494 Gene3D G3DSA:3.10.630.10 1 207 2.8E-128 T 26-04-2016 smi_0331 209af5bc9a4872a907293bee0237d304 82 Pfam PF03672 Uncharacterised protein family (UPF0154) 10 67 2.1E-20 T 26-04-2016 IPR005359 Protein with unknown function UPF0154 smi_0331 209af5bc9a4872a907293bee0237d304 82 ProDom PD048972 UPF0154 TRANSMEMBRANE MEMBRANE UNCHARACTERIZED FAMILY YNEF SUPERFAMILY MG335.1 EXPORTED MYCGA5700 1 68 1.0E-26 T 26-04-2016 IPR005359 Protein with unknown function UPF0154 smi_0331 209af5bc9a4872a907293bee0237d304 82 Hamap MF_00363 UPF0154 protein . 2 72 19.705 T 26-04-2016 IPR005359 Protein with unknown function UPF0154 smi_0331 209af5bc9a4872a907293bee0237d304 82 PANTHER PTHR41297 2 81 2.0E-34 T 26-04-2016 smi_1467 f3ef2e52fad648f518801d13dac3b7df 324 SUPERFAMILY SSF69360 178 323 5.18E-16 T 26-04-2016 smi_1467 f3ef2e52fad648f518801d13dac3b7df 324 Gene3D G3DSA:2.10.270.10 264 323 2.1E-8 T 26-04-2016 smi_1467 f3ef2e52fad648f518801d13dac3b7df 324 Gene3D G3DSA:2.10.270.10 176 263 1.5E-7 T 26-04-2016 smi_1467 f3ef2e52fad648f518801d13dac3b7df 324 PANTHER PTHR33308 187 310 2.1E-29 T 26-04-2016 smi_1467 f3ef2e52fad648f518801d13dac3b7df 324 PANTHER PTHR33308:SF3 187 310 2.1E-29 T 26-04-2016 smi_0426 33dc1fa295aca63335f8401d92d81553 102 Pfam PF08774 VRR-NUC domain 5 94 2.0E-10 T 26-04-2016 IPR014883 VRR-NUC domain GO:0016788 smi_0426 33dc1fa295aca63335f8401d92d81553 102 SMART SM00990 1 95 8.0E-12 T 26-04-2016 IPR014883 VRR-NUC domain GO:0016788 smi_0768 20661e9cc877d57b0d2c688fd1bdb503 367 Gene3D G3DSA:3.40.50.2000 191 336 7.8E-17 T 26-04-2016 smi_0768 20661e9cc877d57b0d2c688fd1bdb503 367 Pfam PF13439 Glycosyltransferase Family 4 18 180 8.9E-7 T 26-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain smi_0768 20661e9cc877d57b0d2c688fd1bdb503 367 Pfam PF00534 Glycosyl transferases group 1 194 335 2.6E-27 T 26-04-2016 IPR001296 Glycosyl transferase, family 1 smi_0768 20661e9cc877d57b0d2c688fd1bdb503 367 PANTHER PTHR12526 4 367 2.3E-40 T 26-04-2016 smi_0768 20661e9cc877d57b0d2c688fd1bdb503 367 SUPERFAMILY SSF53756 5 367 3.54E-56 T 26-04-2016 smi_1439 6b97774ea90641b14245e6c2c4f25481 288 SUPERFAMILY SSF53850 5 265 3.13E-62 T 26-04-2016 smi_1439 6b97774ea90641b14245e6c2c4f25481 288 SMART SM00062 51 269 1.2E-65 T 26-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF smi_1439 6b97774ea90641b14245e6c2c4f25481 288 Gene3D G3DSA:3.40.190.10 48 128 1.9E-34 T 26-04-2016 smi_1439 6b97774ea90641b14245e6c2c4f25481 288 Gene3D G3DSA:3.40.190.10 229 265 1.9E-34 T 26-04-2016 smi_1439 6b97774ea90641b14245e6c2c4f25481 288 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 74 87 - T 26-04-2016 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 smi_1439 6b97774ea90641b14245e6c2c4f25481 288 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 52 265 7.2E-50 T 26-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF smi_1439 6b97774ea90641b14245e6c2c4f25481 288 PANTHER PTHR18966:SF191 38 265 1.5E-60 T 26-04-2016 smi_1439 6b97774ea90641b14245e6c2c4f25481 288 PANTHER PTHR18966 38 265 1.5E-60 T 26-04-2016 smi_1439 6b97774ea90641b14245e6c2c4f25481 288 Gene3D G3DSA:3.40.190.10 129 221 1.6E-22 T 26-04-2016 smi_1032 adcee2c7389b5de695c392d8314e154c 158 Gene3D G3DSA:1.10.10.10 1 141 1.8E-30 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain smi_1032 adcee2c7389b5de695c392d8314e154c 158 PANTHER PTHR33221:SF6 2 155 9.1E-27 T 26-04-2016 smi_1032 adcee2c7389b5de695c392d8314e154c 158 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 26-04-2016 IPR030489 Transcription regulator Rrf2-type, conserved site smi_1032 adcee2c7389b5de695c392d8314e154c 158 PANTHER PTHR33221 2 155 9.1E-27 T 26-04-2016 smi_1032 adcee2c7389b5de695c392d8314e154c 158 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 136 7.2E-27 T 26-04-2016 IPR000944 Transcription regulator Rrf2-type smi_1032 adcee2c7389b5de695c392d8314e154c 158 Pfam PF02082 Transcriptional regulator 1 83 1.2E-20 T 26-04-2016 IPR000944 Transcription regulator Rrf2-type smi_1032 adcee2c7389b5de695c392d8314e154c 158 SUPERFAMILY SSF46785 2 139 1.48E-22 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain smi_0319 5d1dbe63b75bf8dbf79aeed787ed611c 276 ProSitePatterns PS01070 DNA/RNA non-specific endonucleases active site. 157 165 - T 26-04-2016 IPR018524 DNA/RNA non-specific endonuclease, active site GO:0003676|GO:0016787|GO:0046872 smi_0319 5d1dbe63b75bf8dbf79aeed787ed611c 276 Pfam PF01223 DNA/RNA non-specific endonuclease 75 247 3.2E-19 T 26-04-2016 IPR001604 DNA/RNA non-specific endonuclease GO:0003676|GO:0016787|GO:0046872 smi_0319 5d1dbe63b75bf8dbf79aeed787ed611c 276 SMART SM00892 95 272 2.7E-23 T 26-04-2016 IPR001604 DNA/RNA non-specific endonuclease GO:0003676|GO:0016787|GO:0046872 smi_1774 edc382a5836171ad875b82033f588cbc 158 ProSitePatterns PS00763 Glutathione peroxidases signature 2. 60 67 - T 26-04-2016 IPR029760 Glutathione peroxidase conserved site smi_1774 edc382a5836171ad875b82033f588cbc 158 SUPERFAMILY SSF52833 3 158 7.27E-57 T 26-04-2016 IPR012336 Thioredoxin-like fold smi_1774 edc382a5836171ad875b82033f588cbc 158 PANTHER PTHR11592 1 158 2.5E-81 T 26-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 smi_1774 edc382a5836171ad875b82033f588cbc 158 ProSitePatterns PS00460 Glutathione peroxidases active site. 24 39 - T 26-04-2016 IPR029759 Glutathione peroxidase active site smi_1774 edc382a5836171ad875b82033f588cbc 158 Gene3D G3DSA:3.40.30.10 3 158 1.7E-67 T 26-04-2016 IPR012336 Thioredoxin-like fold smi_1774 edc382a5836171ad875b82033f588cbc 158 Pfam PF00255 Glutathione peroxidase 4 111 4.2E-38 T 26-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 smi_1774 edc382a5836171ad875b82033f588cbc 158 PIRSF PIRSF000303 1 158 4.2E-62 T 26-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 smi_1774 edc382a5836171ad875b82033f588cbc 158 PRINTS PR01011 Glutathione peroxidase family signature 22 39 2.6E-16 T 26-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 smi_1774 edc382a5836171ad875b82033f588cbc 158 PRINTS PR01011 Glutathione peroxidase family signature 122 131 2.6E-16 T 26-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 smi_1774 edc382a5836171ad875b82033f588cbc 158 PRINTS PR01011 Glutathione peroxidase family signature 57 73 2.6E-16 T 26-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 smi_1449 c03b0df57695de88dfc29a44cf351208 450 SUPERFAMILY SSF53623 103 307 1.57E-53 T 26-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 smi_1449 c03b0df57695de88dfc29a44cf351208 450 Pfam PF08245 Mur ligase middle domain 117 290 2.7E-34 T 26-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 smi_1449 c03b0df57695de88dfc29a44cf351208 450 Gene3D G3DSA:3.40.1190.10 126 312 2.1E-52 T 26-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 smi_1449 c03b0df57695de88dfc29a44cf351208 450 PANTHER PTHR23135:SF2 1 450 1.1E-170 T 26-04-2016 smi_1449 c03b0df57695de88dfc29a44cf351208 450 SUPERFAMILY SSF53244 309 448 3.85E-39 T 26-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 smi_1449 c03b0df57695de88dfc29a44cf351208 450 Gene3D G3DSA:3.90.190.20 313 444 8.3E-44 T 26-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 smi_1449 c03b0df57695de88dfc29a44cf351208 450 Pfam PF02875 Mur ligase family, glutamate ligase domain 310 378 2.3E-10 T 26-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 smi_1449 c03b0df57695de88dfc29a44cf351208 450 Gene3D G3DSA:3.40.1190.10 85 125 3.0E-10 T 26-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 smi_1449 c03b0df57695de88dfc29a44cf351208 450 PANTHER PTHR23135 1 450 1.1E-170 T 26-04-2016 smi_1449 c03b0df57695de88dfc29a44cf351208 450 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 11 445 5.6E-128 T 26-04-2016 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 smi_1449 c03b0df57695de88dfc29a44cf351208 450 SUPERFAMILY SSF51984 10 100 3.27E-17 T 26-04-2016 smi_1449 c03b0df57695de88dfc29a44cf351208 450 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 10 448 36.383 T 26-04-2016 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 smi_1449 c03b0df57695de88dfc29a44cf351208 450 Gene3D G3DSA:3.40.50.720 7 84 8.4E-19 T 26-04-2016 IPR016040 NAD(P)-binding domain smi_0178 d91a00a70b6581e9369d1e12fae32602 78 Pfam PF01402 Ribbon-helix-helix protein, copG family 9 45 2.0E-4 T 26-04-2016 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 smi_2032 ec5947252ea04a5cf6dcb2b0de33389a 392 SUPERFAMILY SSF103473 20 388 1.7E-24 T 26-04-2016 IPR020846 Major facilitator superfamily domain smi_2032 ec5947252ea04a5cf6dcb2b0de33389a 392 PANTHER PTHR23513:SF2 1 392 4.6E-180 T 26-04-2016 smi_2032 ec5947252ea04a5cf6dcb2b0de33389a 392 Gene3D G3DSA:1.20.1250.20 207 387 1.0E-14 T 26-04-2016 smi_2032 ec5947252ea04a5cf6dcb2b0de33389a 392 Gene3D G3DSA:1.20.1250.20 35 185 1.6E-5 T 26-04-2016 smi_2032 ec5947252ea04a5cf6dcb2b0de33389a 392 Pfam PF07690 Major Facilitator Superfamily 219 389 5.0E-11 T 26-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 smi_2032 ec5947252ea04a5cf6dcb2b0de33389a 392 PANTHER PTHR23513 1 392 4.6E-180 T 26-04-2016 smi_0328 2ccf0d23dbcb522e4eaaaf6655f55f1d 297 PANTHER PTHR32196 4 288 3.1E-76 T 26-04-2016 smi_0328 2ccf0d23dbcb522e4eaaaf6655f55f1d 297 Pfam PF02653 Branched-chain amino acid transport system / permease component 6 278 6.8E-28 T 26-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 smi_0328 2ccf0d23dbcb522e4eaaaf6655f55f1d 297 PANTHER PTHR32196:SF27 4 288 3.1E-76 T 26-04-2016 smi_0643 bd867bf504c9bdf3ec119b065df3ba54 147 Gene3D G3DSA:3.50.80.10 1 144 2.0E-59 T 26-04-2016 IPR023509 D-Tyr tRNAtyr deacylase-like domain smi_0643 bd867bf504c9bdf3ec119b065df3ba54 147 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 1 144 7.0E-60 T 26-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 smi_0643 bd867bf504c9bdf3ec119b065df3ba54 147 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 1 144 34.883 T 26-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 smi_0643 bd867bf504c9bdf3ec119b065df3ba54 147 PANTHER PTHR10472 2 147 1.7E-76 T 26-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 smi_0643 bd867bf504c9bdf3ec119b065df3ba54 147 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 2 143 1.7E-55 T 26-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 smi_0643 bd867bf504c9bdf3ec119b065df3ba54 147 SUPERFAMILY SSF69500 1 144 5.1E-58 T 26-04-2016 IPR023509 D-Tyr tRNAtyr deacylase-like domain smi_2071 956928d837a75b51819ecc602b2a3ff3 427 PANTHER PTHR11851:SF134 22 406 4.4E-81 T 26-04-2016 smi_2071 956928d837a75b51819ecc602b2a3ff3 427 PANTHER PTHR11851 22 406 4.4E-81 T 26-04-2016 smi_2071 956928d837a75b51819ecc602b2a3ff3 427 SUPERFAMILY SSF63411 19 224 1.56E-38 T 26-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 smi_2071 956928d837a75b51819ecc602b2a3ff3 427 SUPERFAMILY SSF63411 277 424 1.03E-12 T 26-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 smi_2071 956928d837a75b51819ecc602b2a3ff3 427 Pfam PF05193 Peptidase M16 inactive domain 187 363 3.1E-16 T 26-04-2016 IPR007863 Peptidase M16, C-terminal smi_2071 956928d837a75b51819ecc602b2a3ff3 427 Pfam PF00675 Insulinase (Peptidase family M16) 64 178 4.4E-15 T 26-04-2016 IPR011765 Peptidase M16, N-terminal smi_2071 956928d837a75b51819ecc602b2a3ff3 427 Gene3D G3DSA:3.30.830.10 16 223 1.6E-36 T 26-04-2016 IPR011237 Peptidase M16 domain GO:0046872 smi_2071 956928d837a75b51819ecc602b2a3ff3 427 Gene3D G3DSA:3.30.830.10 273 418 1.8E-6 T 26-04-2016 IPR011237 Peptidase M16 domain GO:0046872 smi_0107.1 3ed2199f9d1d694de9f3f5269d61c9b0 66 Gene3D G3DSA:1.10.1220.10 5 55 1.8E-6 T 26-04-2016 IPR013321 Arc-type ribbon-helix-helix GO:0006355 smi_0107.1 3ed2199f9d1d694de9f3f5269d61c9b0 66 SUPERFAMILY SSF47598 5 52 1.67E-9 T 26-04-2016 IPR010985 Ribbon-helix-helix GO:0006355 smi_1817 0dcb6944a35e1b8525fdf9f2b147d979 281 Pfam PF02673 Bacitracin resistance protein BacA 10 269 3.9E-73 T 26-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 smi_1817 0dcb6944a35e1b8525fdf9f2b147d979 281 PANTHER PTHR30622:SF5 2 281 5.9E-168 T 26-04-2016 smi_1817 0dcb6944a35e1b8525fdf9f2b147d979 281 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 4 275 16.222 T 26-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 smi_1817 0dcb6944a35e1b8525fdf9f2b147d979 281 PANTHER PTHR30622 2 281 5.9E-168 T 26-04-2016 smi_0795 c5e25a77ea90c71e93cd5d874d608c26 513 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 153 178 - T 26-04-2016 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 smi_0795 c5e25a77ea90c71e93cd5d874d608c26 513 PANTHER PTHR11819:SF161 7 488 1.4E-116 T 26-04-2016 smi_0795 c5e25a77ea90c71e93cd5d874d608c26 513 Pfam PF00474 Sodium:solute symporter family 38 444 3.9E-39 T 26-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 smi_0795 c5e25a77ea90c71e93cd5d874d608c26 513 PANTHER PTHR11819 7 488 1.4E-116 T 26-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 smi_0795 c5e25a77ea90c71e93cd5d874d608c26 513 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 38 445 3.4E-65 T 26-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 smi_0216 654ac5dec73517333a444b17192fc944 276 PRINTS PR00701 60kDa inner membrane protein signature 209 232 2.0E-7 T 26-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 smi_0216 654ac5dec73517333a444b17192fc944 276 PRINTS PR00701 60kDa inner membrane protein signature 125 148 2.0E-7 T 26-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 smi_0216 654ac5dec73517333a444b17192fc944 276 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 59 242 1.4E-49 T 26-04-2016 IPR028055 Membrane insertase YidC/Oxa1, C-terminal smi_0216 654ac5dec73517333a444b17192fc944 276 Pfam PF02096 60Kd inner membrane protein 61 242 3.8E-45 T 26-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 smi_0216 654ac5dec73517333a444b17192fc944 276 Hamap MF_01811 Membrane protein insertase YidC [yidC]. 4 246 28.521 T 26-04-2016 IPR023060 Membrane insertase YidC/YidC1/YidC2, Firmicutes smi_0216 654ac5dec73517333a444b17192fc944 276 PANTHER PTHR12428 15 264 1.6E-55 T 26-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 smi_1250 54f370809e5a7e74b9798f8e7c84f975 227 Pfam PF14335 Domain of unknown function (DUF4391) 26 214 1.7E-15 T 26-04-2016 IPR025503 Protein of unknown function DUF4391 smi_1489 2de3f690cceea3ce6ed0f4d42c20141b 295 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 12 292 3.3E-22 T 26-04-2016 IPR010106 Conserved hypothetical protein CHP01784 smi_1489 2de3f690cceea3ce6ed0f4d42c20141b 295 Pfam PF12784 PD-(D/E)XK nuclease family transposase 10 230 1.4E-22 T 26-04-2016 smi_0748 f82485524401351f694ab5c069bffccf 161 SUPERFAMILY SSF54518 2 153 8.63E-36 T 26-04-2016 IPR025659 Tubby C-terminal-like domain smi_0748 f82485524401351f694ab5c069bffccf 161 PANTHER PTHR31087 1 158 1.7E-72 T 26-04-2016 smi_0748 f82485524401351f694ab5c069bffccf 161 Pfam PF04525 LURP-one-related 3 148 5.9E-14 T 26-04-2016 IPR007612 LURP1-related protein domain smi_0748 f82485524401351f694ab5c069bffccf 161 PANTHER PTHR31087:SF9 1 158 1.7E-72 T 26-04-2016 smi_1193 2c165c5077d69b879bd303ce62e8256d 229 Gene3D G3DSA:3.40.50.10300 1 226 6.2E-53 T 26-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 smi_1193 2c165c5077d69b879bd303ce62e8256d 229 SUPERFAMILY SSF102645 1 228 1.7E-51 T 26-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 smi_1193 2c165c5077d69b879bd303ce62e8256d 229 TIGRFAM TIGR02114 coaB_strep: phosphopantothenate--cysteine ligase 1 228 1.1E-116 T 26-04-2016 IPR011848 Phosphopantothenate--cysteine ligase smi_1193 2c165c5077d69b879bd303ce62e8256d 229 PANTHER PTHR14359 1 96 5.7E-112 T 26-04-2016 smi_1193 2c165c5077d69b879bd303ce62e8256d 229 PANTHER PTHR14359 117 229 5.7E-112 T 26-04-2016 smi_1193 2c165c5077d69b879bd303ce62e8256d 229 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 2 192 3.7E-32 T 26-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 smi_1193 2c165c5077d69b879bd303ce62e8256d 229 PANTHER PTHR14359:SF22 1 96 5.7E-112 T 26-04-2016 smi_1193 2c165c5077d69b879bd303ce62e8256d 229 PANTHER PTHR14359:SF22 117 229 5.7E-112 T 26-04-2016 smi_0947 5c3d19b9213e653295ee1d97469130a6 440 SUPERFAMILY SSF81301 7 166 1.96E-15 T 26-04-2016 smi_1854 aed96635800348e5761565eae66f16c6 267 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 226 252 - T 26-04-2016 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00557 smi_1854 aed96635800348e5761565eae66f16c6 267 Pfam PF01148 Cytidylyltransferase family 7 264 6.9E-71 T 26-04-2016 smi_1854 aed96635800348e5761565eae66f16c6 267 PANTHER PTHR13773 3 264 1.7E-69 T 26-04-2016 smi_1830 09c81c72c7df0af20d618186ea46b796 388 Gene3D G3DSA:3.30.420.10 209 358 9.8E-6 T 26-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 smi_1830 09c81c72c7df0af20d618186ea46b796 388 SUPERFAMILY SSF53098 207 358 1.97E-9 T 26-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 smi_1830 09c81c72c7df0af20d618186ea46b796 388 PANTHER PTHR10948 1 372 4.6E-16 T 26-04-2016 smi_1830 09c81c72c7df0af20d618186ea46b796 388 Pfam PF13936 Helix-turn-helix domain 4 47 1.4E-16 T 26-04-2016 IPR025246 Transposase IS30-like HTH domain smi_0462 7ceb2da84081c4275ea7869d5d1d316e 818 TIGRFAM TIGR02675 tape_meas_nterm: tape measure domain 204 276 4.4E-23 T 26-04-2016 IPR013491 Caudovirus, tape measure, N-terminal smi_1610 3ec5bf189a2ebee315ce683d7744fe72 306 Pfam PF14022 Protein of unknown function (DUF4238) 7 296 4.0E-40 T 26-04-2016 IPR025332 Protein of unknown function DUF4238 smi_0198 17915fccbf50544dabb65bcab983ce34 292 PANTHER PTHR40076 4 281 4.3E-74 T 26-04-2016 smi_0198 17915fccbf50544dabb65bcab983ce34 292 PANTHER PTHR40076:SF1 4 281 4.3E-74 T 26-04-2016 smi_0198 17915fccbf50544dabb65bcab983ce34 292 Pfam PF06161 Protein of unknown function (DUF975) 1 279 1.1E-74 T 26-04-2016 IPR010380 Protein of unknown function DUF975 smi_0927 8e5b8e8a2d5e31808cdfe94c5de977a6 114 PANTHER PTHR39178 2 114 2.8E-42 T 26-04-2016 smi_0927 8e5b8e8a2d5e31808cdfe94c5de977a6 114 Gene3D G3DSA:3.30.70.1490 10 112 8.6E-13 T 26-04-2016 smi_0927 8e5b8e8a2d5e31808cdfe94c5de977a6 114 SUPERFAMILY SSF118010 1 109 2.09E-29 T 26-04-2016 smi_0927 8e5b8e8a2d5e31808cdfe94c5de977a6 114 Pfam PF04327 Cysteine peptidase C108, N-terminal of ribosomal L27 1 106 3.9E-21 T 26-04-2016 IPR007422 Cysteine peptidase C108, N-terminal of ribosomal L27 smi_1792 c05c5ff0e0d29936d3ed3ac3a0b6d260 257 Gene3D G3DSA:3.60.21.10 1 235 2.0E-13 T 26-04-2016 IPR029052 Metallo-dependent phosphatase-like smi_1792 c05c5ff0e0d29936d3ed3ac3a0b6d260 257 Pfam PF00149 Calcineurin-like phosphoesterase 1 196 1.6E-8 T 26-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 smi_1792 c05c5ff0e0d29936d3ed3ac3a0b6d260 257 SUPERFAMILY SSF56300 171 218 5.61E-17 T 26-04-2016 IPR029052 Metallo-dependent phosphatase-like smi_1792 c05c5ff0e0d29936d3ed3ac3a0b6d260 257 SUPERFAMILY SSF56300 1 132 5.61E-17 T 26-04-2016 IPR029052 Metallo-dependent phosphatase-like smi_1470 f5f86e79c34870ca187e1adaa01d64b5 301 Pfam PF01381 Helix-turn-helix 12 62 2.1E-8 T 26-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 smi_1470 f5f86e79c34870ca187e1adaa01d64b5 301 SUPERFAMILY SSF47413 6 65 1.95E-10 T 26-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 smi_1470 f5f86e79c34870ca187e1adaa01d64b5 301 Gene3D G3DSA:1.10.260.40 7 71 4.2E-9 T 26-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 smi_1470 f5f86e79c34870ca187e1adaa01d64b5 301 SMART SM00530 10 64 3.4E-9 T 26-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 smi_1568 1e40ccac1f1f13ecfc580d64e97948a0 252 PANTHER PTHR10108:SF805 11 205 3.2E-34 T 26-04-2016 smi_1568 1e40ccac1f1f13ecfc580d64e97948a0 252 Pfam PF13847 Methyltransferase domain 35 158 4.2E-21 T 26-04-2016 IPR025714 Methyltransferase domain smi_1568 1e40ccac1f1f13ecfc580d64e97948a0 252 PANTHER PTHR10108 11 205 3.2E-34 T 26-04-2016 smi_1568 1e40ccac1f1f13ecfc580d64e97948a0 252 SUPERFAMILY SSF53335 13 228 1.86E-37 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase smi_1568 1e40ccac1f1f13ecfc580d64e97948a0 252 Gene3D G3DSA:3.40.50.150 14 249 1.0E-40 T 26-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase smi_1688 cefefcc770c0bb29c1f08df58a5d7b97 123 Pfam PF06115 Domain of unknown function (DUF956) 1 116 2.4E-42 T 26-04-2016 IPR010360 Protein of unknown function DUF956 smi_1688 cefefcc770c0bb29c1f08df58a5d7b97 123 PIRSF PIRSF021265 1 122 1.1E-52 T 26-04-2016 IPR010360 Protein of unknown function DUF956 smi_0046 2a22f0cdbe18a55b0da1ed487de1a6f8 217 Pfam PF13358 DDE superfamily endonuclease 47 185 6.8E-24 T 26-04-2016 smi_0046 2a22f0cdbe18a55b0da1ed487de1a6f8 217 SUPERFAMILY SSF53098 80 193 2.28E-6 T 26-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 smi_1650 c136f57bde9c502dbc7333f2ea53f711 146 Pfam PF15432 Accessory Sec secretory system ASP3 17 142 4.4E-41 T 26-04-2016 IPR022259 Accessory Sec system protein Asp3 GO:0015031 smi_1650 c136f57bde9c502dbc7333f2ea53f711 146 TIGRFAM TIGR03711 acc_sec_asp3: accessory Sec system protein Asp3 7 140 1.6E-54 T 26-04-2016 IPR022259 Accessory Sec system protein Asp3 GO:0015031 smi_1136 98a8d970034efb39382eacb4e516bd18 143 PANTHER PTHR38459 1 143 3.0E-22 T 26-04-2016 smi_1136 98a8d970034efb39382eacb4e516bd18 143 Pfam PF04138 GtrA-like protein 16 141 1.5E-21 T 26-04-2016 IPR007267 GtrA-like protein GO:0000271|GO:0006810|GO:0016021 smi_0859 71e04116ccd7ec17fe451bb48548e0b7 190 PANTHER PTHR18901 4 175 1.8E-23 T 26-04-2016 smi_0859 71e04116ccd7ec17fe451bb48548e0b7 190 SUPERFAMILY SSF56784 4 186 2.85E-39 T 26-04-2016 IPR023214 HAD-like domain smi_0859 71e04116ccd7ec17fe451bb48548e0b7 190 Gene3D G3DSA:3.40.50.1000 4 18 5.4E-32 T 26-04-2016 IPR023214 HAD-like domain smi_0859 71e04116ccd7ec17fe451bb48548e0b7 190 Gene3D G3DSA:3.40.50.1000 83 185 5.4E-32 T 26-04-2016 IPR023214 HAD-like domain smi_0859 71e04116ccd7ec17fe451bb48548e0b7 190 Pfam PF13419 Haloacid dehalogenase-like hydrolase 10 175 3.6E-24 T 26-04-2016 IPR023214 HAD-like domain smi_0859 71e04116ccd7ec17fe451bb48548e0b7 190 PANTHER PTHR18901:SF14 4 175 1.8E-23 T 26-04-2016 smi_0859 71e04116ccd7ec17fe451bb48548e0b7 190 Gene3D G3DSA:1.10.150.240 19 82 4.9E-35 T 26-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 smi_0859 71e04116ccd7ec17fe451bb48548e0b7 190 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 9 172 1.3E-11 T 26-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 smi_1918 2b719762e29ed0f47b54421be3fdc3bf 101 Hamap MF_01448 UPF0473 protein . 11 101 22.419 T 26-04-2016 IPR009711 Uncharacterised protein family UPF0473 smi_1918 2b719762e29ed0f47b54421be3fdc3bf 101 Pfam PF06949 Protein of unknown function (DUF1292) 20 100 3.4E-15 T 26-04-2016 IPR009711 Uncharacterised protein family UPF0473 smi_1918 2b719762e29ed0f47b54421be3fdc3bf 101 PANTHER PTHR40066 1 101 1.4E-31 T 26-04-2016 smi_1918 2b719762e29ed0f47b54421be3fdc3bf 101 PANTHER PTHR40066:SF1 1 101 1.4E-31 T 26-04-2016 smi_0438 17e69551e76cd31348972cd13b69670a 117 PANTHER PTHR33988 6 107 2.6E-19 T 26-04-2016 smi_0438 17e69551e76cd31348972cd13b69670a 117 Pfam PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system 11 108 4.3E-18 T 26-04-2016 IPR003477 mRNA interferase PemK-like protein GO:0003677 smi_0438 17e69551e76cd31348972cd13b69670a 117 PANTHER PTHR33988:SF3 6 107 2.6E-19 T 26-04-2016 smi_0438 17e69551e76cd31348972cd13b69670a 117 Gene3D G3DSA:2.30.30.110 7 115 4.2E-29 T 26-04-2016 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor smi_0438 17e69551e76cd31348972cd13b69670a 117 SUPERFAMILY SSF50118 5 115 1.9E-25 T 26-04-2016 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor smi_1632 e3608b90fe411791fac183dac3df3936 365 PANTHER PTHR37825 2 365 5.8E-111 T 26-04-2016 smi_1632 e3608b90fe411791fac183dac3df3936 365 SUPERFAMILY SSF52374 10 138 1.44E-17 T 26-04-2016 smi_1632 e3608b90fe411791fac183dac3df3936 365 SUPERFAMILY SSF52374 186 211 1.44E-17 T 26-04-2016 smi_1632 e3608b90fe411791fac183dac3df3936 365 Hamap MF_01539 UPF0348 protein . 2 361 34.325 T 26-04-2016 IPR008513 Uncharacterised protein family UPF0348 smi_1632 e3608b90fe411791fac183dac3df3936 365 PANTHER PTHR37825:SF1 2 365 5.8E-111 T 26-04-2016 smi_1632 e3608b90fe411791fac183dac3df3936 365 Gene3D G3DSA:3.40.50.620 1 214 2.6E-73 T 26-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold smi_1632 e3608b90fe411791fac183dac3df3936 365 Pfam PF05636 HIGH Nucleotidyl Transferase 1 346 1.0E-107 T 26-04-2016 IPR008513 Uncharacterised protein family UPF0348 smi_0097 7c73eec740e1e99cd8fd7f37716b04be 69 Pfam PF14206 Cysteine-rich CPCC 19 63 9.5E-10 T 26-04-2016 IPR025983 Cysteine-rich CPCC domain smi_1818 3a8432f99753a5eff4a8e8369c6149aa 629 Pfam PF09972 Predicted membrane protein (DUF2207) 26 558 2.4E-79 T 26-04-2016 IPR018702 Protein of unknown function DUF2207, membrane smi_0535 6807580101641282d76c253ebeab52ef 211 Pfam PF04239 Protein of unknown function (DUF421) 89 190 2.4E-30 T 26-04-2016 IPR007353 Protein of unknown function DUF421 smi_0535 6807580101641282d76c253ebeab52ef 211 Gene3D G3DSA:3.30.240.20 156 211 3.2E-16 T 26-04-2016 IPR023090 Uncharacterised domain UPF0702, alpha/beta domain smi_0535 6807580101641282d76c253ebeab52ef 211 Gene3D G3DSA:3.30.240.20 83 155 1.5E-23 T 26-04-2016 IPR023090 Uncharacterised domain UPF0702, alpha/beta domain smi_0535 6807580101641282d76c253ebeab52ef 211 PANTHER PTHR34582:SF6 3 211 5.4E-70 T 26-04-2016 smi_0535 6807580101641282d76c253ebeab52ef 211 PANTHER PTHR34582 3 211 5.4E-70 T 26-04-2016 smi_0611 56239cf944543e803c83b05347ca8e54 116 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 8 104 4.2E-9 T 26-04-2016 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family smi_0611 56239cf944543e803c83b05347ca8e54 116 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 7 106 1.6E-8 T 26-04-2016 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family smi_0984 91d06e8a156646eb56558a93fdbb0e1f 407 Pfam PF01098 Cell cycle protein 13 391 2.2E-84 T 26-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 smi_0984 91d06e8a156646eb56558a93fdbb0e1f 407 PANTHER PTHR30474:SF2 1 407 8.9E-129 T 26-04-2016 smi_0984 91d06e8a156646eb56558a93fdbb0e1f 407 PANTHER PTHR30474 1 407 8.9E-129 T 26-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 smi_1768 e4a18b28abd5af205fa5661b7c64b840 105 TIGRFAM TIGR02209 ftsL_broad: cell division protein FtsL 23 104 1.3E-20 T 26-04-2016 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 smi_1768 e4a18b28abd5af205fa5661b7c64b840 105 Hamap MF_00910 Cell division protein FtsL [ftsL]. 21 105 13.545 T 26-04-2016 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 smi_1768 e4a18b28abd5af205fa5661b7c64b840 105 PANTHER PTHR41300:SF1 1 105 6.6E-27 T 26-04-2016 smi_1768 e4a18b28abd5af205fa5661b7c64b840 105 PANTHER PTHR41300 1 105 6.6E-27 T 26-04-2016 smi_1635 c87ca4b3320313ac1c674edd43ec144f 166 Pfam PF00857 Isochorismatase family 3 148 2.9E-28 T 26-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 smi_1635 c87ca4b3320313ac1c674edd43ec144f 166 Gene3D G3DSA:3.40.50.850 1 165 2.2E-38 T 26-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 smi_1635 c87ca4b3320313ac1c674edd43ec144f 166 SUPERFAMILY SSF52499 2 158 3.4E-38 T 26-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 smi_1635 c87ca4b3320313ac1c674edd43ec144f 166 PANTHER PTHR11080 1 166 3.1E-38 T 26-04-2016 smi_1635 c87ca4b3320313ac1c674edd43ec144f 166 PANTHER PTHR11080:SF13 1 166 3.1E-38 T 26-04-2016 smi_1326 e79adf26b29b63070cd3c5c8d7e0e0cf 259 Pfam PF14355 Abortive infection C-terminus 181 253 1.5E-9 T 26-04-2016 IPR026001 Abortive infection protein-like, C-terminal domain smi_1365 39276fd2a7e2884da28024e84ba0a26a 278 PANTHER PTHR32552 1 275 5.0E-81 T 26-04-2016 smi_1365 39276fd2a7e2884da28024e84ba0a26a 278 SUPERFAMILY SSF53098 109 271 1.67E-30 T 26-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 smi_1365 39276fd2a7e2884da28024e84ba0a26a 278 Gene3D G3DSA:3.30.420.10 108 269 5.8E-23 T 26-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 smi_1365 39276fd2a7e2884da28024e84ba0a26a 278 Pfam PF00665 Integrase core domain 114 227 5.6E-24 T 26-04-2016 IPR001584 Integrase, catalytic core GO:0015074 smi_1365 39276fd2a7e2884da28024e84ba0a26a 278 Pfam PF13276 HTH-like domain 37 90 1.5E-19 T 26-04-2016 IPR025948 HTH-like domain smi_0195 ded0d79d93b1e89aace66136491d7870 207 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 99 176 7.3E-7 T 26-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 smi_0195 ded0d79d93b1e89aace66136491d7870 207 SUPERFAMILY SSF56784 5 203 3.34E-41 T 26-04-2016 IPR023214 HAD-like domain smi_0195 ded0d79d93b1e89aace66136491d7870 207 Gene3D G3DSA:3.40.50.1000 1 15 1.4E-29 T 26-04-2016 IPR023214 HAD-like domain smi_0195 ded0d79d93b1e89aace66136491d7870 207 Gene3D G3DSA:3.40.50.1000 85 184 1.4E-29 T 26-04-2016 IPR023214 HAD-like domain smi_0195 ded0d79d93b1e89aace66136491d7870 207 PANTHER PTHR18901 1 180 8.2E-37 T 26-04-2016 smi_0195 ded0d79d93b1e89aace66136491d7870 207 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 180 6.3E-30 T 26-04-2016 IPR023214 HAD-like domain smi_0195 ded0d79d93b1e89aace66136491d7870 207 PANTHER PTHR18901:SF14 1 180 8.2E-37 T 26-04-2016 smi_0522 a507f141b3afbdc4f095576d2e68ebec 134 SUPERFAMILY SSF54637 8 121 3.94E-29 T 26-04-2016 IPR029069 HotDog domain smi_0522 a507f141b3afbdc4f095576d2e68ebec 134 PANTHER PTHR21660 1 122 3.6E-25 T 26-04-2016 smi_0522 a507f141b3afbdc4f095576d2e68ebec 134 Gene3D G3DSA:3.10.129.10 3 133 9.0E-43 T 26-04-2016 IPR029069 HotDog domain smi_0522 a507f141b3afbdc4f095576d2e68ebec 134 Pfam PF03061 Thioesterase superfamily 39 114 8.2E-20 T 26-04-2016 IPR006683 Thioesterase domain smi_0522 a507f141b3afbdc4f095576d2e68ebec 134 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 15 121 1.2E-18 T 26-04-2016 IPR003736 Phenylacetic acid degradation-related domain smi_1906 a50d4f9c3f24203ed8dd194bb90e59ad 102 SMART SM01403 7 101 2.4E-54 T 26-04-2016 IPR027486 Ribosomal protein S10 domain smi_1906 a50d4f9c3f24203ed8dd194bb90e59ad 102 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 26.67 T 26-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 smi_1906 a50d4f9c3f24203ed8dd194bb90e59ad 102 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 3.5E-19 T 26-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 smi_1906 a50d4f9c3f24203ed8dd194bb90e59ad 102 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 3.5E-19 T 26-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 smi_1906 a50d4f9c3f24203ed8dd194bb90e59ad 102 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 3.5E-19 T 26-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 smi_1906 a50d4f9c3f24203ed8dd194bb90e59ad 102 Gene3D G3DSA:3.30.70.600 3 102 5.3E-43 T 26-04-2016 IPR027486 Ribosomal protein S10 domain smi_1906 a50d4f9c3f24203ed8dd194bb90e59ad 102 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 26-04-2016 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 smi_1906 a50d4f9c3f24203ed8dd194bb90e59ad 102 Pfam PF00338 Ribosomal protein S10p/S20e 7 101 1.4E-34 T 26-04-2016 IPR027486 Ribosomal protein S10 domain smi_1906 a50d4f9c3f24203ed8dd194bb90e59ad 102 PANTHER PTHR11700 1 102 9.2E-48 T 26-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 smi_1906 a50d4f9c3f24203ed8dd194bb90e59ad 102 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 3.1E-44 T 26-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 smi_1906 a50d4f9c3f24203ed8dd194bb90e59ad 102 SUPERFAMILY SSF54999 5 102 8.76E-37 T 26-04-2016 IPR027486 Ribosomal protein S10 domain smi_1585 d7a817ff92bfca1d3145ca8644ce291d 259 PANTHER PTHR10907 3 215 5.0E-53 T 26-04-2016 smi_1585 d7a817ff92bfca1d3145ca8644ce291d 259 Gene3D G3DSA:3.40.50.1820 3 248 8.4E-59 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold smi_1585 d7a817ff92bfca1d3145ca8644ce291d 259 Pfam PF00756 Putative esterase 10 245 7.5E-20 T 26-04-2016 IPR000801 Putative esterase smi_1585 d7a817ff92bfca1d3145ca8644ce291d 259 SUPERFAMILY SSF53474 2 246 6.54E-49 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold smi_1585 d7a817ff92bfca1d3145ca8644ce291d 259 PANTHER PTHR10907:SF33 3 215 5.0E-53 T 26-04-2016 smi_0460 1a899fe2cf9f9dc108523eeb9b8c7b93 154 SUPERFAMILY SSF69279 8 149 9.18E-36 T 26-04-2016 smi_0460 1a899fe2cf9f9dc108523eeb9b8c7b93 154 Pfam PF09393 Phage tail tube protein 4 146 6.8E-35 T 26-04-2016 IPR018989 Phage tail tube protein smi_0660 82646cf15780a5f5dc266d5e701251e4 230 SUPERFAMILY SSF53474 12 224 6.53E-39 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold smi_0660 82646cf15780a5f5dc266d5e701251e4 230 Pfam PF00756 Putative esterase 14 176 8.2E-9 T 26-04-2016 IPR000801 Putative esterase smi_0660 82646cf15780a5f5dc266d5e701251e4 230 Gene3D G3DSA:3.40.50.1820 12 228 1.6E-28 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold smi_0562 668cd306dbd46cfdd63d872d716a5442 148 ProSitePatterns PS00893 Nudix box signature. 49 70 - T 26-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 smi_0562 668cd306dbd46cfdd63d872d716a5442 148 Gene3D G3DSA:3.90.79.10 19 144 1.2E-21 T 26-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 smi_0562 668cd306dbd46cfdd63d872d716a5442 148 SUPERFAMILY SSF55811 19 145 1.49E-22 T 26-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 smi_0562 668cd306dbd46cfdd63d872d716a5442 148 PANTHER PTHR22769 24 125 1.3E-12 T 26-04-2016 smi_0562 668cd306dbd46cfdd63d872d716a5442 148 Pfam PF00293 NUDIX domain 21 128 4.6E-12 T 26-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 smi_0122 586a66fb0845aa9dd06a7796cc1e6176 224 Pfam PF11368 Protein of unknown function (DUF3169) 1 217 8.1E-36 T 26-04-2016 IPR021509 Protein of unknown function DUF3169 smi_0040 118fc30b0a60463ac9c8a3d0568bef9a 265 Pfam PF13005 zinc-finger binding domain of transposase IS66 67 110 5.9E-12 T 26-04-2016 IPR024474 Zinc-finger binding domain of transposase IS66 smi_0040 118fc30b0a60463ac9c8a3d0568bef9a 265 Pfam PF03050 Transposase IS66 family 132 262 6.3E-35 T 26-04-2016 IPR004291 Transposase, IS66 smi_0040 118fc30b0a60463ac9c8a3d0568bef9a 265 PANTHER PTHR33678 45 261 1.5E-47 T 26-04-2016 smi_2007 465fa93e55577b4c88f10e28567b1a94 91 SUPERFAMILY SSF46955 37 86 7.51E-6 T 26-04-2016 IPR009061 Putative DNA-binding domain smi_0717 68461dbf65f1104fbcb5ead968ab001c 262 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 130 142 - T 26-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 smi_0717 68461dbf65f1104fbcb5ead968ab001c 262 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 3 252 2.1E-69 T 26-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 smi_0717 68461dbf65f1104fbcb5ead968ab001c 262 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 4 247 4.1E-76 T 26-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 smi_0717 68461dbf65f1104fbcb5ead968ab001c 262 PANTHER PTHR30589:SF0 2 262 1.8E-110 T 26-04-2016 smi_0717 68461dbf65f1104fbcb5ead968ab001c 262 PANTHER PTHR30589 2 262 1.8E-110 T 26-04-2016 smi_0717 68461dbf65f1104fbcb5ead968ab001c 262 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 1 252 18.304 T 26-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 smi_0945 512615068d8d739d0ecf6b65e387ea90 264 Pfam PF14355 Abortive infection C-terminus 178 257 1.0E-21 T 26-04-2016 IPR026001 Abortive infection protein-like, C-terminal domain smi_2033 fd0f15db3257ef299ea104aee6fd01c7 234 ProSitePatterns PS00221 MIP family signature. 63 71 - T 26-04-2016 IPR022357 Major intrinsic protein, conserved site GO:0005215|GO:0006810|GO:0016020 smi_2033 fd0f15db3257ef299ea104aee6fd01c7 234 PRINTS PR00783 Major intrinsic protein family signature 3 22 7.5E-48 T 26-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 smi_2033 fd0f15db3257ef299ea104aee6fd01c7 234 PRINTS PR00783 Major intrinsic protein family signature 45 69 7.5E-48 T 26-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 smi_2033 fd0f15db3257ef299ea104aee6fd01c7 234 PRINTS PR00783 Major intrinsic protein family signature 137 155 7.5E-48 T 26-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 smi_2033 fd0f15db3257ef299ea104aee6fd01c7 234 PRINTS PR00783 Major intrinsic protein family signature 82 101 7.5E-48 T 26-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 smi_2033 fd0f15db3257ef299ea104aee6fd01c7 234 PRINTS PR00783 Major intrinsic protein family signature 167 189 7.5E-48 T 26-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 smi_2033 fd0f15db3257ef299ea104aee6fd01c7 234 PRINTS PR00783 Major intrinsic protein family signature 214 234 7.5E-48 T 26-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 smi_2033 fd0f15db3257ef299ea104aee6fd01c7 234 PANTHER PTHR19139:SF147 1 234 2.2E-92 T 26-04-2016 smi_2033 fd0f15db3257ef299ea104aee6fd01c7 234 Gene3D G3DSA:1.20.1080.10 2 233 1.2E-82 T 26-04-2016 IPR023271 Aquaporin-like smi_2033 fd0f15db3257ef299ea104aee6fd01c7 234 SUPERFAMILY SSF81338 2 234 5.63E-70 T 26-04-2016 IPR023271 Aquaporin-like smi_2033 fd0f15db3257ef299ea104aee6fd01c7 234 TIGRFAM TIGR00861 MIP: MIP family channel proteins 7 231 8.2E-55 T 26-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 smi_2033 fd0f15db3257ef299ea104aee6fd01c7 234 Pfam PF00230 Major intrinsic protein 3 231 1.1E-44 T 26-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 smi_2033 fd0f15db3257ef299ea104aee6fd01c7 234 PANTHER PTHR19139 1 234 2.2E-92 T 26-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 smi_0102 b8bafb0e281744418c3c45ee3acef290 415 Pfam PF05816 Toxic anion resistance protein (TelA) 56 385 6.7E-22 T 26-04-2016 IPR008863 Toxic anion resistance smi_1859 caf22dab4c2025fa7a7e053c962f2382 187 Pfam PF06042 Nucleotidyltransferase 23 182 3.4E-58 T 26-04-2016 IPR009267 Putative nucleotidyltransferase smi_1859 caf22dab4c2025fa7a7e053c962f2382 187 PANTHER PTHR39166 1 187 1.3E-67 T 26-04-2016 smi_0786 76f2e701f1fb542fc187d6d27765d294 259 Pfam PF06970 Replication initiator protein A (RepA) N-terminus 14 88 1.9E-29 T 26-04-2016 IPR010724 Replication initiator A, N-terminal smi_1338 1829a0568610915a0291619f48d18aca 160 Pfam PF08281 Sigma-70, region 4 101 143 1.0E-8 T 26-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 smi_1338 1829a0568610915a0291619f48d18aca 160 Gene3D G3DSA:1.10.10.10 108 154 4.5E-11 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain smi_1338 1829a0568610915a0291619f48d18aca 160 SUPERFAMILY SSF88659 98 157 9.16E-16 T 26-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 smi_0378 4b1fc0f5d5c55c7885df4396388d7dd9 99 Gene3D G3DSA:3.30.1330.30 3 97 8.2E-23 T 26-04-2016 IPR029064 50S ribosomal protein L30e-like smi_0378 4b1fc0f5d5c55c7885df4396388d7dd9 99 Pfam PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 4 93 1.3E-16 T 26-04-2016 IPR004038 Ribosomal protein L7Ae/L30e/S12e/Gadd45 smi_0378 4b1fc0f5d5c55c7885df4396388d7dd9 99 SUPERFAMILY SSF55315 4 98 2.94E-25 T 26-04-2016 IPR029064 50S ribosomal protein L30e-like smi_1458 51e26a095219e44237e10f65603b6649 524 SUPERFAMILY SSF55874 400 513 1.24E-8 T 26-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain smi_1335 ddb0ab7030127fd3d6c42c971a8e1f81 55 Pfam PF14205 Cysteine-rich KTR 1 50 4.3E-28 T 26-04-2016 IPR025957 Cysteine-rich KTR smi_1654 47eb74af54253c478d0ff2b024125b5e 300 PANTHER PTHR22916:SF24 3 243 6.9E-63 T 26-04-2016 smi_1654 47eb74af54253c478d0ff2b024125b5e 300 Gene3D G3DSA:3.90.550.10 3 206 2.7E-56 T 26-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases smi_1654 47eb74af54253c478d0ff2b024125b5e 300 PANTHER PTHR22916 3 243 6.9E-63 T 26-04-2016 smi_1654 47eb74af54253c478d0ff2b024125b5e 300 SUPERFAMILY SSF53448 4 225 1.69E-57 T 26-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases smi_1654 47eb74af54253c478d0ff2b024125b5e 300 Pfam PF00535 Glycosyl transferase family 2 6 176 1.1E-40 T 26-04-2016 IPR001173 Glycosyltransferase 2-like smi_1639 69f413c2099b8ce2d6642544d7b885ad 368 Gene3D G3DSA:3.40.50.300 74 225 1.1E-28 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1639 69f413c2099b8ce2d6642544d7b885ad 368 PANTHER PTHR11089:SF34 1 368 2.5E-222 T 26-04-2016 smi_1639 69f413c2099b8ce2d6642544d7b885ad 368 SUPERFAMILY SSF52540 65 276 8.58E-32 T 26-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase smi_1639 69f413c2099b8ce2d6642544d7b885ad 368 Pfam PF01926 50S ribosome-binding GTPase 166 231 5.5E-14 T 26-04-2016 IPR006073 GTP binding domain GO:0005525 smi_1639 69f413c2099b8ce2d6642544d7b885ad 368 PANTHER PTHR11089 1 368 2.5E-222 T 26-04-2016 smi_1639 69f413c2099b8ce2d6642544d7b885ad 368 TIGRFAM TIGR03597 GTPase_YqeH: ribosome biogenesis GTPase YqeH 6 368 3.5E-158 T 26-04-2016 IPR019988 GTP-binding protein, riobosome biogenesis, YqeH smi_0083 08092c304033780640d140241ad5b34b 134 Pfam PF03610 PTS system fructose IIA component 5 104 3.5E-22 T 26-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 smi_0083 08092c304033780640d140241ad5b34b 134 SUPERFAMILY SSF53062 2 122 1.23E-33 T 26-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 smi_0083 08092c304033780640d140241ad5b34b 134 PANTHER PTHR33799 3 134 2.4E-26 T 26-04-2016 smi_0083 08092c304033780640d140241ad5b34b 134 Gene3D G3DSA:3.40.50.510 2 133 2.0E-39 T 26-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 smi_0044 5fb8fea3c15f1b06e2866b8ab173a332 178 Pfam PF13707 RloB-like protein 1 172 7.0E-23 T 26-04-2016 IPR025591 RloB-like protein smi_0131 fc397ead5d8ad3158b791249b8086b73 280 PANTHER PTHR32243:SF41 3 280 2.1E-207 T 26-04-2016 smi_0131 fc397ead5d8ad3158b791249b8086b73 280 PANTHER PTHR32243 3 280 2.1E-207 T 26-04-2016 smi_0131 fc397ead5d8ad3158b791249b8086b73 280 SUPERFAMILY SSF161098 8 280 1.87E-58 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 smi_0131 fc397ead5d8ad3158b791249b8086b73 280 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 92 273 1.0E-22 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 smi_0131 fc397ead5d8ad3158b791249b8086b73 280 Gene3D G3DSA:1.10.3720.10 6 267 2.4E-57 T 26-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 smi_1346 1980c39b0799145f256c3023718f0e3e 241 Pfam PF14507 CppA C-terminal 145 238 4.9E-22 T 26-04-2016 IPR032703 CppA, C-terminal smi_1346 1980c39b0799145f256c3023718f0e3e 241 Pfam PF14506 CppA N-terminal 10 130 3.3E-55 T 26-04-2016 IPR032702 CppA, N-terminal smi_1346 1980c39b0799145f256c3023718f0e3e 241 Gene3D G3DSA:3.10.180.10 1 124 2.3E-30 T 26-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase smi_1346 1980c39b0799145f256c3023718f0e3e 241 Gene3D G3DSA:3.10.180.10 150 240 1.8E-32 T 26-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase smi_1122 6c6ebda1cab71542c4b2a3c42f716627 335 Pfam PF04245 37-kD nucleoid-associated bacterial protein 20 331 2.6E-33 T 26-04-2016 IPR007358 Nucleoid-associated protein NdpA GO:0009295 smi_0791 ab27b598ecbca1f7d4b59eb59c693ffe 195 Pfam PF02517 CAAX protease self-immunity 103 188 1.7E-13 T 26-04-2016 IPR003675 CAAX amino terminal protease GO:0016020 smi_2015 d23bf343d60ddf470f0ada2291e2f7f8 141 SMART SM00530 3 58 1.9E-19 T 26-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 smi_2015 d23bf343d60ddf470f0ada2291e2f7f8 141 Gene3D G3DSA:1.10.260.40 2 63 5.4E-23 T 26-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 smi_2015 d23bf343d60ddf470f0ada2291e2f7f8 141 Pfam PF01381 Helix-turn-helix 4 58 5.0E-19 T 26-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 smi_2015 d23bf343d60ddf470f0ada2291e2f7f8 141 PANTHER PTHR10245 2 104 7.4E-15 T 26-04-2016 smi_2015 d23bf343d60ddf470f0ada2291e2f7f8 141 SUPERFAMILY SSF47413 2 63 1.64E-18 T 26-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 smi_1659 c9e336914e85ed088d8caacaef27489b 336 SUPERFAMILY SSF53756 87 169 2.2E-5 T 26-04-2016 smi_1659 c9e336914e85ed088d8caacaef27489b 336 PIRSF PIRSF007023 1 335 1.0E-148 T 26-04-2016 IPR016503 UDP-galactofuranosyltransferase GO:0016757 smi_0451 b5c23e5f69a8dec8887d09e9b919fdfc 188 Pfam PF06810 Phage minor structural protein GP20 14 157 2.2E-32 T 26-04-2016 IPR009636 Capsid assembly scaffolding protein GO:0005198 smi_0034 c9f1a4e3aa13f2a5e0d91876a6d8ee81 323 PANTHER PTHR41317 3 315 1.4E-13 T 26-04-2016 smi_0034 c9f1a4e3aa13f2a5e0d91876a6d8ee81 323 Pfam PF12784 PD-(D/E)XK nuclease family transposase 10 230 6.1E-22 T 26-04-2016 smi_0034 c9f1a4e3aa13f2a5e0d91876a6d8ee81 323 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 12 318 7.9E-17 T 26-04-2016 IPR010106 Conserved hypothetical protein CHP01784 smi_1144 a8b34e55b7b2a60bbac648fc76a7a2f9 463 PIRSF PIRSF006060 5 462 7.7E-77 T 26-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 smi_1144 a8b34e55b7b2a60bbac648fc76a7a2f9 463 PANTHER PTHR11785 12 463 1.5E-135 T 26-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 smi_1144 a8b34e55b7b2a60bbac648fc76a7a2f9 463 Pfam PF13520 Amino acid permease 20 428 2.3E-47 T 26-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 smi_1144 a8b34e55b7b2a60bbac648fc76a7a2f9 463 PANTHER PTHR11785:SF342 12 463 1.5E-135 T 26-04-2016 smi_0059 53a0ff0c25f2df24865de3ca0e2eab24 243 Pfam PF00072 Response regulator receiver domain 3 119 9.3E-9 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 smi_0059 53a0ff0c25f2df24865de3ca0e2eab24 243 PANTHER PTHR26402:SF577 1 223 4.3E-17 T 26-04-2016 smi_0059 53a0ff0c25f2df24865de3ca0e2eab24 243 Gene3D G3DSA:3.40.50.2300 1 127 3.1E-12 T 26-04-2016 smi_0059 53a0ff0c25f2df24865de3ca0e2eab24 243 Gene3D G3DSA:2.40.50.40 148 209 2.8E-6 T 26-04-2016 smi_0059 53a0ff0c25f2df24865de3ca0e2eab24 243 Pfam PF04397 LytTr DNA-binding domain 150 241 6.6E-13 T 26-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 smi_0059 53a0ff0c25f2df24865de3ca0e2eab24 243 SMART SM00448 1 121 9.1E-7 T 26-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 smi_0059 53a0ff0c25f2df24865de3ca0e2eab24 243 SUPERFAMILY SSF52172 1 133 4.55E-11 T 26-04-2016 IPR011006 CheY-like superfamily smi_0059 53a0ff0c25f2df24865de3ca0e2eab24 243 SMART SM00850 147 242 3.5E-11 T 26-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 smi_0059 53a0ff0c25f2df24865de3ca0e2eab24 243 PANTHER PTHR26402 1 223 4.3E-17 T 26-04-2016 smi_1350 9ebb472ee2ed1132237776f040c84ec7 388 Pfam PF13535 ATP-grasp domain 151 286 3.0E-7 T 26-04-2016 smi_1350 9ebb472ee2ed1132237776f040c84ec7 388 SUPERFAMILY SSF56059 87 314 9.37E-31 T 26-04-2016 smi_1350 9ebb472ee2ed1132237776f040c84ec7 388 Gene3D G3DSA:3.30.470.20 107 336 5.1E-26 T 26-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 smi_1692 75739c68f58587d2c5ffe9ea02a8f11e 127 Pfam PF13613 Helix-turn-helix of DDE superfamily endonuclease 48 97 1.3E-13 T 26-04-2016 IPR027805 Transposase, Helix-turn-helix domain smi_1148 75739c68f58587d2c5ffe9ea02a8f11e 127 Pfam PF13613 Helix-turn-helix of DDE superfamily endonuclease 48 97 1.3E-13 T 26-04-2016 IPR027805 Transposase, Helix-turn-helix domain smi_0858 6c5c15b97f80804ac296b9cac0c8c384 388 Gene3D G3DSA:3.30.420.10 209 358 1.3E-5 T 26-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 smi_0858 6c5c15b97f80804ac296b9cac0c8c384 388 Pfam PF13936 Helix-turn-helix domain 4 47 1.4E-16 T 26-04-2016 IPR025246 Transposase IS30-like HTH domain smi_0858 6c5c15b97f80804ac296b9cac0c8c384 388 SUPERFAMILY SSF53098 207 358 2.88E-9 T 26-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 smi_0858 6c5c15b97f80804ac296b9cac0c8c384 388 PANTHER PTHR10948 1 372 8.0E-16 T 26-04-2016 smi_0554 4eb63b02e0949286db9423166e881b7f 78 Pfam PF04226 Transglycosylase associated protein 31 76 6.1E-9 T 26-04-2016 IPR007341 Transglycosylase-associated protein GO:0016021 smi_0386 1e31d36496f661d5e5d5ff231d0ef5e6 192 Pfam PF01613 Flavin reductase like domain 43 125 3.6E-6 T 26-04-2016 IPR002563 Flavin reductase like domain GO:0010181 smi_0386 1e31d36496f661d5e5d5ff231d0ef5e6 192 SUPERFAMILY SSF50475 9 170 1.03E-22 T 26-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 smi_0386 1e31d36496f661d5e5d5ff231d0ef5e6 192 Gene3D G3DSA:2.30.110.10 6 164 6.2E-23 T 26-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 smi_1116 2b4f890d5c3e4ec73573e9add4a65f41 254 Pfam PF14243 Domain of unknown function (DUF4343) 103 221 1.0E-37 T 26-04-2016 IPR025643 Protein of unknown function DUF4343 smi_1116 2b4f890d5c3e4ec73573e9add4a65f41 254 SUPERFAMILY SSF56059 92 224 5.3E-5 T 26-04-2016 smi_1986 a23eb21ed14337d182e958313783a7ac 197 Pfam PF08006 Protein of unknown function (DUF1700) 1 187 2.7E-16 T 26-04-2016 IPR012963 Protein of unknown function DUF1700 smi_0844 da5641f28d8643014f7381ef7d0d75f8 78 Pfam PF11195 Protein of unknown function (DUF2829) 2 76 3.2E-21 T 26-04-2016 IPR021361 Protein of unknown function DUF2829 smi_1851 736a7a99ed3f3108c7c15b90f6fe3bdd 459 PANTHER PTHR10353 3 459 9.0E-254 T 26-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 smi_1851 736a7a99ed3f3108c7c15b90f6fe3bdd 459 SUPERFAMILY SSF51445 2 453 9.11E-159 T 26-04-2016 IPR017853 Glycoside hydrolase superfamily smi_1851 736a7a99ed3f3108c7c15b90f6fe3bdd 459 Pfam PF00232 Glycosyl hydrolase family 1 3 459 4.1E-129 T 26-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 smi_1851 736a7a99ed3f3108c7c15b90f6fe3bdd 459 Gene3D G3DSA:3.20.20.80 3 453 2.5E-141 T 26-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 smi_1851 736a7a99ed3f3108c7c15b90f6fe3bdd 459 PANTHER PTHR10353:SF73 3 459 9.0E-254 T 26-04-2016 smi_1851 736a7a99ed3f3108c7c15b90f6fe3bdd 459 PRINTS PR00131 Glycosyl hydrolase family 1 signature 428 440 3.0E-15 T 26-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 smi_1851 736a7a99ed3f3108c7c15b90f6fe3bdd 459 PRINTS PR00131 Glycosyl hydrolase family 1 signature 404 421 3.0E-15 T 26-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 smi_1851 736a7a99ed3f3108c7c15b90f6fe3bdd 459 PRINTS PR00131 Glycosyl hydrolase family 1 signature 383 394 3.0E-15 T 26-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 smi_1851 736a7a99ed3f3108c7c15b90f6fe3bdd 459 PRINTS PR00131 Glycosyl hydrolase family 1 signature 288 302 3.0E-15 T 26-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 smi_1851 736a7a99ed3f3108c7c15b90f6fe3bdd 459 PRINTS PR00131 Glycosyl hydrolase family 1 signature 360 368 3.0E-15 T 26-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 smi_1414 fd05c9eeec04a81c1594957d0827ee87 289 PANTHER PTHR11795 1 289 8.7E-134 T 26-04-2016 smi_1414 fd05c9eeec04a81c1594957d0827ee87 289 Gene3D G3DSA:1.10.3470.10 41 200 1.2E-5 T 26-04-2016 IPR029022 ABC transporter, BtuC-like smi_1414 fd05c9eeec04a81c1594957d0827ee87 289 PANTHER PTHR11795:SF371 1 289 8.7E-134 T 26-04-2016 smi_1414 fd05c9eeec04a81c1594957d0827ee87 289 Pfam PF02653 Branched-chain amino acid transport system / permease component 5 273 1.7E-51 T 26-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 smi_1230 17607cadb90533fa9b9cd1652824a802 267 PANTHER PTHR13627 142 255 3.2E-26 T 26-04-2016 smi_1230 17607cadb90533fa9b9cd1652824a802 267 PANTHER PTHR13627 15 73 3.2E-26 T 26-04-2016 smi_1230 17607cadb90533fa9b9cd1652824a802 267 Pfam PF04991 LicD family 24 243 2.3E-61 T 26-04-2016 IPR007074 LicD family smi_0583 f0253eb80586bf9245b295c3a5ae8912 389 Pfam PF07261 Replication initiation and membrane attachment 258 327 5.5E-5 T 26-04-2016 IPR006343 Replication protein, DnaD/DnaB domain smi_1040 e0936f7bd709f622294501b40e6e7141 85 Pfam PF13024 Protein of unknown function (DUF3884) 10 83 2.1E-27 T 26-04-2016 IPR024979 Protein of unknown function DUF3884 smi_0841 c39075a6d590a4da70d68824d17076b2 419 PANTHER PTHR30572 1 419 1.2E-75 T 26-04-2016 smi_0841 c39075a6d590a4da70d68824d17076b2 419 Pfam PF02687 FtsX-like permease family 295 412 4.6E-18 T 26-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 smi_0841 c39075a6d590a4da70d68824d17076b2 419 Pfam PF12704 MacB-like periplasmic core domain 18 253 3.8E-24 T 26-04-2016 IPR025857 MacB-like periplasmic core domain smi_1339 567179c2ab5074576ba127012f68b832 76 Pfam PF12645 Helix-turn-helix domain 10 74 4.4E-25 T 26-04-2016 IPR024760 Helix-turn-helix, conjugative transposon-like smi_0384 1d737fbf73e8e2d8d04220211e09e4a8 84 Gene3D G3DSA:1.20.58.90 1 84 1.6E-50 T 26-04-2016 smi_0384 1d737fbf73e8e2d8d04220211e09e4a8 84 SUPERFAMILY SSF140121 1 77 1.7E-41 T 26-04-2016 smi_0384 1d737fbf73e8e2d8d04220211e09e4a8 84 Pfam PF08930 Domain of unknown function (DUF1912) 1 84 1.3E-48 T 26-04-2016 IPR015026 Protein of unknown function DUF1912 smi_2036 86141a71d99445b9e3965b1806b7b859 475 Pfam PF05043 Mga helix-turn-helix domain 82 160 2.7E-24 T 26-04-2016 IPR007737 Mga helix-turn-helix domain smi_2036 86141a71d99445b9e3965b1806b7b859 475 Gene3D G3DSA:1.10.10.10 14 54 0.001 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain smi_0008 6a90ba7c36a996facf92bdb0c1af987f 122 PANTHER PTHR40027 1 122 1.3E-36 T 26-04-2016 smi_0008 6a90ba7c36a996facf92bdb0c1af987f 122 PANTHER PTHR40027:SF1 1 122 1.3E-36 T 26-04-2016 smi_0008 6a90ba7c36a996facf92bdb0c1af987f 122 Pfam PF04977 Septum formation initiator 41 118 2.8E-19 T 26-04-2016 IPR007060 Septum formation initiator FtsL/DivIC GO:0007049 smi_1939 9bf00597f6f86ec6a2a6b776fc0c2fe3 204 Pfam PF04854 Protein of unknown function, DUF624 19 88 3.5E-14 T 26-04-2016 IPR006938 Protein of unknown function DUF624 smi_0435 0506acecd4288cd2139d6ed4b08564b3 162 SUPERFAMILY SSF101386 4 77 2.58E-7 T 26-04-2016 smi_0435 0506acecd4288cd2139d6ed4b08564b3 162 Gene3D G3DSA:1.10.287.1080 3 74 8.4E-6 T 26-04-2016 smi_1149 18b0e151dad04121e737996f6ab67c5e 85 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 10 71 2.7E-11 T 26-04-2016 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 smi_1949 3c97563489b0f3b07c1dbb70b083fabc 221 PANTHER PTHR10794 129 214 6.5E-12 T 26-04-2016 smi_1949 3c97563489b0f3b07c1dbb70b083fabc 221 Pfam PF02517 CAAX protease self-immunity 122 213 1.1E-16 T 26-04-2016 IPR003675 CAAX amino terminal protease GO:0016020 smi_0060 77970f764f513b0edae47918d1b43b53 65 TIGRFAM TIGR03949 bact_IIb_cerein: class IIb bacteriocin, lactobin A/cerein 7B family 11 60 6.3E-12 T 26-04-2016 IPR023991 Bacteriocin, class IIb, lactobin A/cerein 7B family smi_1120 c09abca4287c46cc22f57faff1f7ba3f 324 Pfam PF06207 Protein of unknown function (DUF1002) 43 275 1.1E-56 T 26-04-2016 IPR009343 Protein of unknown function DUF1002 smi_1706 77236d502ac4efb052a0a0caa452c1dc 118 Pfam PF13280 WYL domain 1 110 2.4E-8 T 26-04-2016 IPR026881 WYL domain smi_0818 1c1c9fccd491247b062ed77b2c1ca9b5 176 PANTHER PTHR41319 2 176 2.2E-73 T 26-04-2016 smi_0818 1c1c9fccd491247b062ed77b2c1ca9b5 176 Pfam PF06265 Protein of unknown function (DUF1027) 30 111 3.5E-34 T 26-04-2016 IPR009370 Protein of unknown function DUF1027 smi_0818 1c1c9fccd491247b062ed77b2c1ca9b5 176 PANTHER PTHR41319:SF1 2 176 2.2E-73 T 26-04-2016 smi_1447 238fb4ef38647fc666f1a83829646bce 403 Hamap MF_00912 Cell division protein DivIB [divIB]. 76 355 30.238 T 26-04-2016 IPR026580 Cell division protein DivIB smi_1447 238fb4ef38647fc666f1a83829646bce 403 PANTHER PTHR37820 14 403 3.3E-75 T 26-04-2016 smi_1447 238fb4ef38647fc666f1a83829646bce 403 Pfam PF03799 Cell division protein FtsQ 228 341 2.0E-6 T 26-04-2016 IPR005548 Cell division protein FtsQ/DivIB smi_1447 238fb4ef38647fc666f1a83829646bce 403 Pfam PF08478 POTRA domain, FtsQ-type 155 223 6.9E-18 T 26-04-2016 IPR013685 Polypeptide-transport-associated, FtsQ-type smi_1320 e7c1f6f64c5b340d768dcbeb3c60f1cd 104 Pfam PF06125 Bacterial protein of unknown function (DUF961) 4 102 8.4E-36 T 26-04-2016 IPR010365 Protein of unknown function DUF961 smi_0351 40b607fdc45b81acad2b772971e606b7 191 Pfam PF11193 Protein of unknown function (DUF2812) 14 126 1.1E-28 T 26-04-2016 IPR021359 Protein of unknown function DUF2812 smi_0351 40b607fdc45b81acad2b772971e606b7 191 PANTHER PTHR41258 2 183 5.7E-21 T 26-04-2016 smi_1430 80226dfd4929c64e757b245c29df95bb 115 Gene3D G3DSA:3.10.180.10 1 113 4.4E-27 T 26-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase smi_1430 80226dfd4929c64e757b245c29df95bb 115 SUPERFAMILY SSF54593 1 113 3.71E-22 T 26-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase smi_0703 b5a7d8cdb50ef2e87d73ed1b59bc12c7 261 PANTHER PTHR36833:SF1 1 261 4.6E-134 T 26-04-2016 smi_0703 b5a7d8cdb50ef2e87d73ed1b59bc12c7 261 PANTHER PTHR36833 1 261 4.6E-134 T 26-04-2016 smi_0703 b5a7d8cdb50ef2e87d73ed1b59bc12c7 261 Pfam PF06182 ABC-2 family transporter protein 35 260 1.5E-75 T 26-04-2016 IPR010390 Protein of unknown function DUF990 smi_0111 8328c27faad6dc2027785464dd7b8ff1 285 SUPERFAMILY SSF52518 6 272 1.82E-80 T 26-04-2016 IPR029061 Thiamin diphosphate-binding fold smi_0111 8328c27faad6dc2027785464dd7b8ff1 285 PANTHER PTHR11624:SF86 7 269 3.8E-75 T 26-04-2016 smi_0111 8328c27faad6dc2027785464dd7b8ff1 285 PANTHER PTHR11624 7 269 3.8E-75 T 26-04-2016 IPR033247 Transketolase family smi_0111 8328c27faad6dc2027785464dd7b8ff1 285 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 13 258 1.7E-45 T 26-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 smi_0111 8328c27faad6dc2027785464dd7b8ff1 285 Gene3D G3DSA:3.40.50.970 5 270 5.3E-82 T 26-04-2016 IPR029061 Thiamin diphosphate-binding fold smi_1645 25159b749de42cdd3bc373026cdf2196 74 Pfam PF17000 Accessory secretory protein Sec, Asp5 1 72 6.5E-19 T 26-04-2016 IPR031548 Accessory secretory protein Asp5 smi_0997 e132f429f92a4cd936a714ab79866469 44 Pfam PF13253 Protein of unknown function (DUF4044) 8 38 6.7E-11 T 26-04-2016 IPR025270 Protein of unknown function DUF4044 smi_1009 f287e41859d7679fb763362ce2029721 265 Pfam PF01226 Formate/nitrite transporter 15 254 2.6E-42 T 26-04-2016 IPR000292 Formate/nitrite transporter GO:0005215|GO:0006810|GO:0016020 smi_1009 f287e41859d7679fb763362ce2029721 265 PANTHER PTHR30520:SF5 5 265 9.7E-104 T 26-04-2016 smi_1009 f287e41859d7679fb763362ce2029721 265 PANTHER PTHR30520 5 265 9.7E-104 T 26-04-2016 smi_1009 f287e41859d7679fb763362ce2029721 265 Gene3D G3DSA:1.20.1080.10 23 259 7.3E-48 T 26-04-2016 IPR023271 Aquaporin-like smi_0087 920f8bea2ad505a9e7c9b53665c1dd02 254 Pfam PF01048 Phosphorylase superfamily 41 232 1.3E-30 T 26-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 smi_0087 920f8bea2ad505a9e7c9b53665c1dd02 254 Gene3D G3DSA:3.40.50.1580 30 250 7.7E-49 T 26-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 smi_0087 920f8bea2ad505a9e7c9b53665c1dd02 254 SUPERFAMILY SSF53167 31 251 6.55E-49 T 26-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 smi_0467 8f97fcf5dcb29629ad039a9c88f70f0d 351 PANTHER PTHR37829 1 351 7.1E-48 T 26-04-2016 smi_0467 8f97fcf5dcb29629ad039a9c88f70f0d 351 Pfam PF04865 Baseplate J-like protein 62 303 3.8E-44 T 26-04-2016 IPR006949 Baseplate protein J-like smi_1267 762ba8f231105d0ef94c30b175ca1fdb 124 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 11 117 1.6E-20 T 26-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 smi_1267 762ba8f231105d0ef94c30b175ca1fdb 124 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 8 121 16.278 T 26-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 smi_1267 762ba8f231105d0ef94c30b175ca1fdb 124 PANTHER PTHR28259 9 117 1.4E-28 T 26-04-2016 smi_1085 535fccab894358895066e0acdcd6fa4f 271 Pfam PF09323 Domain of unknown function (DUF1980) 1 178 6.4E-65 T 26-04-2016 IPR015402 Protein of unknown function DUF1980 smi_1085 535fccab894358895066e0acdcd6fa4f 271 PANTHER PTHR40047 1 271 3.3E-100 T 26-04-2016 smi_1085 535fccab894358895066e0acdcd6fa4f 271 TIGRFAM TIGR03943 TIGR03943: TIGR03943 family protein 19 266 2.8E-56 T 26-04-2016 IPR015402 Protein of unknown function DUF1980 smi_1468 896e1c0ed0287c1585fe587cfc41519d 187 Pfam PF13151 Protein of unknown function (DUF3990) 17 180 4.5E-25 T 26-04-2016 IPR025051 Protein of unknown function DUF3990 smi_1468 896e1c0ed0287c1585fe587cfc41519d 187 SUPERFAMILY SSF56399 15 69 8.54E-5 T 26-04-2016 smi_1468 896e1c0ed0287c1585fe587cfc41519d 187 Gene3D G3DSA:3.90.228.10 2 66 4.1E-4 T 26-04-2016 IPR012317 Poly(ADP-ribose) polymerase, catalytic domain GO:0003950 smi_0124 fe8c22ffbd92d2c0940b0d1a84ed5027 232 Pfam PF12698 ABC-2 family transporter protein 31 221 3.9E-11 T 26-04-2016 smi_0082 b14cb89d205cc2da6356fc27c99605ac 271 PANTHER PTHR32502 1 261 3.9E-177 T 26-04-2016 smi_0082 b14cb89d205cc2da6356fc27c99605ac 271 PANTHER PTHR32502:SF11 1 261 3.9E-177 T 26-04-2016 smi_0082 b14cb89d205cc2da6356fc27c99605ac 271 Pfam PF03613 PTS system mannose/fructose/sorbose family IID component 7 266 1.1E-82 T 26-04-2016 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 smi_0853 6f421deffd7f13045d8825129d289cb4 95 Pfam PF11674 Protein of unknown function (DUF3270) 2 88 4.4E-31 T 26-04-2016 IPR021688 Protein of unknown function DUF3270 smi_0707 09aa013a05f9d4769231cf9b23e4d06a 119 Pfam PF11877 Protein of unknown function (DUF3397) 8 113 2.0E-25 T 26-04-2016 IPR024515 Protein of unknown function DUF3397 smi_1611 fb582ceae7d9756e3cac9a094f4fd925 418 Gene3D G3DSA:2.70.98.30 246 365 9.0E-4 T 26-04-2016 smi_1088 315e6b1bff92482b258fc9a3075a8d9f 238 SUPERFAMILY SSF53474 5 93 7.01E-14 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold smi_1088 315e6b1bff92482b258fc9a3075a8d9f 238 SUPERFAMILY SSF53474 128 235 7.01E-14 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold smi_1088 315e6b1bff92482b258fc9a3075a8d9f 238 Gene3D G3DSA:3.40.50.1820 54 234 7.0E-13 T 26-04-2016 IPR029058 Alpha/Beta hydrolase fold smi_0204 3b9d22fda80c27700b9a40222a96469b 121 Pfam PF06279 Protein of unknown function (DUF1033) 1 118 2.6E-54 T 26-04-2016 IPR010434 Protein of unknown function DUF1033 smi_1603 32db80b05bb8c9d6fe7b180c84d89d6d 134 Pfam PF08349 Protein of unknown function (DUF1722) 18 126 4.6E-23 T 26-04-2016 IPR013560 Domain of unknown function DUF1722 smi_1476 aea2c7bd990f0454a5ddee58bc24352d 56 Pfam PF11240 Protein of unknown function (DUF3042) 3 55 5.1E-25 T 26-04-2016 IPR021402 Protein of unknown function DUF3042 smi_1340 368a17d61881d1d127ffed1ce377a6f5 66 Pfam PF11372 Domain of unknown function (DUF3173) 3 58 1.6E-23 T 26-04-2016 IPR021512 Protein of unknown function DUF3173 smi_1321 cd76c5071013d198027445acaa741726 125 Pfam PF06125 Bacterial protein of unknown function (DUF961) 6 105 4.7E-37 T 26-04-2016 IPR010365 Protein of unknown function DUF961 smi_0767 6e008a011a8ebffccb46938a6584685e 281 PANTHER PTHR13627 137 280 8.5E-31 T 26-04-2016 smi_0767 6e008a011a8ebffccb46938a6584685e 281 PANTHER PTHR13627 16 74 8.5E-31 T 26-04-2016 smi_0767 6e008a011a8ebffccb46938a6584685e 281 Pfam PF04991 LicD family 25 246 5.2E-55 T 26-04-2016 IPR007074 LicD family smi_1385 8d9db461f81d6308ccfd477848872ccd 164 Pfam PF00583 Acetyltransferase (GNAT) family 56 145 1.5E-6 T 26-04-2016 IPR000182 GNAT domain GO:0008080 smi_1385 8d9db461f81d6308ccfd477848872ccd 164 SUPERFAMILY SSF55729 1 155 2.66E-21 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase smi_1385 8d9db461f81d6308ccfd477848872ccd 164 Gene3D G3DSA:3.40.630.30 1 163 2.3E-56 T 26-04-2016 IPR016181 Acyl-CoA N-acyltransferase smi_0468 8ea7382f8e6fa913aa2090d29d7c62d0 165 Pfam PF10076 Uncharacterised protein conserved in bacteria (DUF2313) 12 96 2.7E-6 T 26-04-2016 IPR018755 Bacteriophage Mu, Gp48 smi_1672 af33d890e6e87f82bf9118cb4a1f2021 241 Pfam PF02517 CAAX protease self-immunity 130 221 4.7E-15 T 26-04-2016 IPR003675 CAAX amino terminal protease GO:0016020 smi_0440 b1d947a7f65e3ab25f3570b691758223 148 TIGRFAM TIGR01637 phage_arpU: phage transcriptional regulator, ArpU family 4 136 3.1E-31 T 26-04-2016 IPR006524 Transcription activator, ArpU family smi_1272 5f676eb5d9c25c6df193bd4935e264be 123 Pfam PF04221 RelB antitoxin 39 101 7.3E-8 T 26-04-2016 IPR007337 RelB antitoxin/Antitoxin DinJ smi_1428 a3b0738162a28e54ad958b5cb8eb98f7 86 Pfam PF03083 Sugar efflux transporter for intercellular exchange 8 81 5.1E-9 T 26-04-2016 IPR004316 SWEET sugar transporter GO:0016021 smi_0100 9130a0e9d04a8e1f059c964707e0dba8 115 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 10 108 2.0E-11 T 26-04-2016 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family smi_0561 c54c36a471c912536f3967f287cc2511 156 Pfam PF11217 Protein of unknown function (DUF3013) 1 155 2.2E-60 T 26-04-2016 IPR021380 Protein of unknown function DUF3013 smi_0420 5eedfe3198d6915b3d013fa8cb5c8785 157 Pfam PF05565 Siphovirus Gp157 3 157 6.7E-43 T 26-04-2016 IPR008840 Siphovirus Gp157 smi_1989 9e7136447c9c1677a984c61b9f330783 286 Pfam PF14132 Domain of unknown function (DUF4299) 4 281 4.1E-92 T 26-04-2016 IPR025387 Protein of unknown function DUF4299 smi_1329 9ddb58f2342432d992de0f3073114826 131 Pfam PF12648 TcpE family 6 105 2.4E-31 T 26-04-2016 IPR025608 TcpE family smi_0692 cd9326342054166c4a539cf828d8e1e0 459 Pfam PF02687 FtsX-like permease family 303 451 3.8E-28 T 26-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 smi_0692 cd9326342054166c4a539cf828d8e1e0 459 PANTHER PTHR30489 409 458 1.6E-40 T 26-04-2016 smi_0692 cd9326342054166c4a539cf828d8e1e0 459 PANTHER PTHR30489 5 390 1.6E-40 T 26-04-2016 smi_0442 1e292b638af6ed6831d40cf4acff74d4 161 PANTHER PTHR41328 12 155 2.0E-32 T 26-04-2016 smi_0442 1e292b638af6ed6831d40cf4acff74d4 161 Pfam PF03592 Terminase small subunit 14 144 1.3E-27 T 26-04-2016 IPR005335 Terminase small subunit GO:0006323 smi_0574 1003f14b48212ff373a38261bccf90ae 73 Pfam PF15507 Domain of unknown function (DUF4649) 2 69 5.2E-34 T 26-04-2016 IPR027879 Protein of unknown function DUF4649 smi_0461 689449d2aa5cdf77c3bc1ca7f1918345 134 Pfam PF08890 Phage XkdN-like tail assembly chaperone protein, TAC 5 133 3.7E-29 T 26-04-2016 IPR014986 Clostridium phage phiCD119, XkdN smi_1921 64c9d96ad4cd647997e8d95dcf188e54 189 Gene3D G3DSA:3.30.1830.10 53 176 1.3E-4 T 26-04-2016 IPR009736 Protein of unknown function DUF1307 smi_1703 5d9468ecb3d28fc43f329a83bc6b1a17 73 Gene3D G3DSA:3.40.430.10 6 72 1.1E-10 T 26-04-2016 IPR024072 Dihydrofolate reductase-like domain smi_1703 5d9468ecb3d28fc43f329a83bc6b1a17 73 SUPERFAMILY SSF53597 5 65 3.57E-9 T 26-04-2016 IPR024072 Dihydrofolate reductase-like domain smi_1703 5d9468ecb3d28fc43f329a83bc6b1a17 73 Pfam PF01872 RibD C-terminal domain 4 61 2.8E-9 T 26-04-2016 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 smi_1727 cd5066dd89c2dcaafc8fed9fa673f555 273 Pfam PF08378 Nuclease-related domain 98 168 1.7E-6 T 26-04-2016 IPR011528 Nuclease-related domain, NERD smi_0423 f58c14317ed403175045fc643413d771 160 Pfam PF05037 Protein of unknown function (DUF669) 6 135 5.9E-25 T 26-04-2016 IPR007731 Protein of unknown function DUF669 smi_0429 cde79e5884ada94439422a79e56f1166 170 Pfam PF07852 Protein of unknown function (DUF1642) 39 167 4.8E-24 T 26-04-2016 IPR012865 Protein of unknown function DUF1642 smi_2008 68e4064637ce10944b74d8f08136b65d 113 Gene3D G3DSA:1.10.10.10 5 55 8.5E-5 T 26-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain smi_1605 38a6cfd6b5d53b293f2d6a0dcd9074fa 185 Pfam PF01420 Type I restriction modification DNA specificity domain 54 167 1.5E-11 T 26-04-2016 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 smi_1605 38a6cfd6b5d53b293f2d6a0dcd9074fa 185 SUPERFAMILY SSF116734 49 182 5.72E-22 T 26-04-2016 smi_1870 229dc94f2ad5fcec95d95085c6d060aa 280 Pfam PF01061 ABC-2 type transporter 2 216 5.2E-12 T 26-04-2016 IPR013525 ABC-2 type transporter GO:0016020 smi_1196 0e29a4126d48a5273d5e9b10d05c5f3d 175 Pfam PF07155 ECF-type riboflavin transporter, S component 6 173 2.6E-6 T 26-04-2016 IPR009825 ECF transporter, substrate-specific component-like GO:0016020 smi_0789 1560b78cd5fa384546990dc90a8eaa5e 126 SUPERFAMILY SSF52833 1 119 4.03E-5 T 26-04-2016 IPR012336 Thioredoxin-like fold smi_0789 1560b78cd5fa384546990dc90a8eaa5e 126 Gene3D G3DSA:3.40.30.10 1 119 0.001 T 26-04-2016 IPR012336 Thioredoxin-like fold smi_1593 49d94e79bd0ef6132f2d83794942d839 289 Gene3D G3DSA:1.10.10.60 243 264 1.2E-5 T 26-04-2016 IPR009057 Homeodomain-like GO:0003677 smi_1593 49d94e79bd0ef6132f2d83794942d839 289 Pfam PF13556 PucR C-terminal helix-turn-helix domain 237 279 1.9E-11 T 26-04-2016 IPR025736 PucR C-terminal helix-turn-helix domain smi_0456 96306ae2681b70df407e59299e575284 142 Pfam PF04883 Bacteriophage HK97-gp10, putative tail-component 11 86 5.7E-12 T 26-04-2016 IPR010064 Bacteriophage HK97-gp10, putative tail-component smi_1987 f37d780ccbc691720088a43d8510e12f 303 Pfam PF13349 Putative adhesin 57 282 6.7E-24 T 26-04-2016 IPR025164 Putative adhesin smi_1229 345c53001eb3b76dbdb500d9ba5362fc 495 Pfam PF01943 Polysaccharide biosynthesis protein 7 271 2.5E-13 T 26-04-2016 IPR002797 Polysaccharide biosynthesis protein GO:0016020 smi_1799 7efbe457cab3c80dae900bfd6a65d27f 399 Pfam PF12698 ABC-2 family transporter protein 19 369 4.6E-39 T 26-04-2016 smi_1799 7efbe457cab3c80dae900bfd6a65d27f 399 PANTHER PTHR41312 2 399 8.3E-139 T 26-04-2016 smi_1540 4fca05b8fdec060c470b79c456e92421 59 Pfam PF13129 Protein of unknown function (DUF3953) 14 54 5.7E-13 T 26-04-2016 IPR025018 Protein of unknown function DUF3953 smi_0690 c24e6b258e463e04697bcd1b3e76e2ea 425 PANTHER PTHR30489 4 424 3.4E-42 T 26-04-2016 smi_0690 c24e6b258e463e04697bcd1b3e76e2ea 425 Pfam PF02687 FtsX-like permease family 289 417 6.5E-12 T 26-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 smi_1514 37c5a6ffdf85fe050d6000403e41c182 216 Pfam PF08820 Domain of unknown function (DUF1803) 3 92 6.9E-33 T 26-04-2016 IPR014924 Protein of unknown function DUF1803 smi_0908 4b7f5206a1f554499dedf04908de3db5 76 Pfam PF11184 Protein of unknown function (DUF2969) 1 74 1.9E-25 T 26-04-2016 IPR021351 Protein of unknown function DUF2969 smi_0465 21c6409429c2c6c928326f9a65a5486b 98 Pfam PF10844 Protein of unknown function (DUF2577) 8 52 4.0E-5 T 26-04-2016 IPR022555 Protein of unknown function, DUF2577 smi_1506 124ef2e69934b00bbadc28a7b72ec4c7 214 Pfam PF07751 Abi-like protein 65 209 8.9E-21 T 26-04-2016 IPR011664 Abortive infection system protein AbiD/AbiF-like smi_0408 ad590bb04845840efcb034e3c2aaea30 85 Pfam PF13783 Domain of unknown function (DUF4177) 26 80 8.0E-7 T 26-04-2016 IPR025234 Protein of unknown function DUF4177 smi_1117 c69ac257ee2a5a8da31d337ee709b0b2 62 Gene3D G3DSA:1.10.1220.10 4 47 1.5E-5 T 26-04-2016 IPR013321 Arc-type ribbon-helix-helix GO:0006355 smi_1971 97b981f3444ce6dc5a9dc136d16679e3 702 TIGRFAM TIGR01654 bact_immun_7tm: bacteriocin-associated integral membrane protein 9 699 2.2E-195 T 26-04-2016 IPR006541 Bacteriocin-associated integral membrane protein smi_1071 ec1a7aba84db4ec337feba0630a14df5 250 Pfam PF12730 ABC-2 family transporter protein 5 184 1.2E-7 T 26-04-2016 IPR032688 ABC-2 family transporter protein GO:0006810 smi_0372 c56fd0dfbc4bb8f068b3bf1c86aed8b5 203 Pfam PF02517 CAAX protease self-immunity 109 196 8.4E-19 T 26-04-2016 IPR003675 CAAX amino terminal protease GO:0016020 smi_1371 e7eca80a4cc4e5331f337ed2f88c6adf 198 Pfam PF04103 CD20-like family 7 111 5.7E-8 T 26-04-2016 IPR007237 CD20-like family GO:0016021 smi_1258 f095b6b07864351cfbb132d442f18f0f 185 ProDom PD009560 CYCLASE ADENYLATE CYCLASE ADENYLYL CYAB LYASE CLASS CYAB-TYPE THERMOPHILIC MJ0240 1 149 1.0E-4 T 26-04-2016 smi_1258 f095b6b07864351cfbb132d442f18f0f 185 Pfam PF01928 CYTH domain 1 146 1.5E-10 T 26-04-2016 IPR023577 CYTH domain smi_1258 f095b6b07864351cfbb132d442f18f0f 185 SUPERFAMILY SSF55154 3 177 5.89E-16 T 26-04-2016 IPR033469 CYTH-like domain smi_1258 f095b6b07864351cfbb132d442f18f0f 185 Gene3D G3DSA:2.40.320.10 3 179 1.1E-19 T 26-04-2016 IPR023577 CYTH domain smi_0059.1 2aac3f1d158a37b2cff0ba69c2b8c0a4 42 Pfam PF10439 Bacteriocin class II with double-glycine leader peptide 2 40 1.3E-6 T 26-04-2016 IPR019493 Bacteriocin, class IIb, lactacin-related GO:0042742 smi_0125 d3b174b79ab02fb84f8573f0ab4cec75 213 Pfam PF02517 CAAX protease self-immunity 111 205 8.2E-19 T 26-04-2016 IPR003675 CAAX amino terminal protease GO:0016020 smi_1868 29fbd58504eda6d0b052ddae48c5a110 139 Pfam PF11457 Protein of unknown function (DUF3021) 1 130 3.5E-15 T 26-04-2016 IPR021560 Protein of unknown function DUF3021 smi_0800 a223b660662b6cb7774424b4e726db4f 663 Pfam PF01496 V-type ATPase 116kDa subunit family 566 651 2.2E-7 T 26-04-2016 IPR002490 V-type ATPase, V0 complex, 116kDa subunit family GO:0015078|GO:0015991|GO:0033179 smi_0800 a223b660662b6cb7774424b4e726db4f 663 Pfam PF01496 V-type ATPase 116kDa subunit family 26 406 1.9E-8 T 26-04-2016 IPR002490 V-type ATPase, V0 complex, 116kDa subunit family GO:0015078|GO:0015991|GO:0033179 smi_0433 f9a6eeaec1a24f1598db802e4aa6db5a 86 Pfam PF07116 Protein of unknown function (DUF1372) 4 84 1.2E-18 T 26-04-2016 IPR010779 Protein of unknown function DUF1372 smi_1646 eb97e1cc23030fa0e6a02322cc39a059 59 Pfam PF16996 Accessory secretory protein Sec Asp4 4 57 6.2E-28 T 26-04-2016 IPR031551 Accessory secretory protein Asp4 smi_1696 5d6283f505a7856cc37062000f63c981 303 Pfam PF12642 Conjugative transposon protein TcpC 78 301 8.2E-60 T 26-04-2016 IPR024735 Conjugative transposon protein TcpC